Query 016374
Match_columns 390
No_of_seqs 436 out of 1181
Neff 11.1
Searched_HMMs 46136
Date Fri Mar 29 06:16:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016374.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016374hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 1.4E-43 2.9E-48 308.0 33.8 356 3-387 34-390 (394)
2 COG2271 UhpC Sugar phosphate p 100.0 1.5E-43 3.2E-48 303.3 23.8 374 1-383 48-434 (448)
3 PRK11663 regulatory protein Uh 100.0 9.9E-42 2.1E-46 314.2 31.1 382 2-388 43-429 (434)
4 PRK03545 putative arabinose tr 100.0 4.6E-41 9.9E-46 306.2 34.7 353 3-385 30-382 (390)
5 TIGR00893 2A0114 d-galactonate 100.0 5.8E-41 1.3E-45 306.6 32.7 377 2-381 14-397 (399)
6 PRK09556 uhpT sugar phosphate 100.0 2.4E-41 5.2E-46 314.5 27.8 372 2-382 49-448 (467)
7 KOG2532 Permease of the major 100.0 2.1E-40 4.6E-45 300.5 31.0 375 9-383 65-447 (466)
8 TIGR00903 2A0129 major facilit 100.0 8.6E-40 1.9E-44 292.9 32.7 351 2-380 11-362 (368)
9 TIGR02332 HpaX 4-hydroxyphenyl 100.0 3E-40 6.5E-45 302.0 30.2 360 2-372 28-410 (412)
10 PRK09705 cynX putative cyanate 100.0 8.2E-40 1.8E-44 297.6 32.6 354 1-386 28-384 (393)
11 TIGR00894 2A0114euk Na(+)-depe 100.0 1.3E-39 2.8E-44 303.4 34.0 373 11-383 70-450 (465)
12 PRK10091 MFS transport protein 100.0 1.2E-38 2.6E-43 289.2 31.1 356 2-387 23-380 (382)
13 TIGR00890 2A0111 Oxalate/Forma 100.0 1.1E-38 2.5E-43 289.5 29.9 352 2-376 23-375 (377)
14 PRK11273 glpT sn-glycerol-3-ph 100.0 4.7E-38 1E-42 291.3 33.5 375 3-382 50-434 (452)
15 PRK14995 methyl viologen resis 100.0 2.5E-38 5.3E-43 296.0 30.3 344 2-357 26-412 (495)
16 PRK10213 nepI ribonucleoside t 100.0 1.7E-37 3.7E-42 282.1 34.7 343 4-376 42-384 (394)
17 PRK11551 putative 3-hydroxyphe 100.0 4.6E-38 9.9E-43 288.4 30.5 359 2-385 35-398 (406)
18 PRK03699 putative transporter; 100.0 6.8E-38 1.5E-42 285.5 31.2 351 2-381 27-378 (394)
19 PRK15402 multidrug efflux syst 100.0 7.3E-37 1.6E-41 280.2 35.6 357 3-382 34-394 (406)
20 TIGR00881 2A0104 phosphoglycer 100.0 1.3E-38 2.8E-43 289.4 22.9 358 2-365 15-379 (379)
21 TIGR00712 glpT glycerol-3-phos 100.0 1.7E-37 3.7E-42 286.5 29.8 379 4-387 49-437 (438)
22 PRK10406 alpha-ketoglutarate t 100.0 4.3E-37 9.2E-42 283.4 31.8 363 2-388 42-429 (432)
23 PLN00028 nitrate transmembrane 100.0 1E-36 2.3E-41 283.2 32.6 368 2-383 56-433 (476)
24 TIGR00897 2A0118 polyol permea 100.0 2.9E-36 6.3E-41 275.4 33.0 359 4-383 35-401 (402)
25 TIGR00899 2A0120 sugar efflux 100.0 2.2E-36 4.8E-41 274.4 31.8 350 4-382 19-373 (375)
26 TIGR00710 efflux_Bcr_CflA drug 100.0 4.1E-36 8.9E-41 273.7 33.0 336 2-360 25-363 (385)
27 TIGR00891 2A0112 putative sial 100.0 1E-36 2.2E-41 279.6 28.9 356 2-368 32-401 (405)
28 COG2223 NarK Nitrate/nitrite t 100.0 5.4E-37 1.2E-41 263.6 25.0 362 2-386 34-404 (417)
29 PRK10642 proline/glycine betai 100.0 4.5E-36 9.7E-41 280.6 32.9 367 3-382 37-429 (490)
30 PRK11102 bicyclomycin/multidru 100.0 6.3E-36 1.4E-40 271.6 32.6 362 2-386 11-375 (377)
31 PRK12307 putative sialic acid 100.0 2.4E-36 5.2E-41 278.7 30.1 352 3-370 39-395 (426)
32 PRK15403 multidrug efflux syst 100.0 9.1E-36 2E-40 272.3 33.5 353 2-375 36-389 (413)
33 TIGR00711 efflux_EmrB drug res 100.0 6.2E-37 1.3E-41 287.5 26.0 345 2-358 22-410 (485)
34 PRK03633 putative MFS family t 100.0 2.1E-35 4.5E-40 268.1 31.7 345 2-381 26-370 (381)
35 TIGR00900 2A0121 H+ Antiporter 100.0 8.9E-36 1.9E-40 269.4 28.5 340 3-360 20-365 (365)
36 PRK10504 putative transporter; 100.0 2.3E-35 5E-40 275.5 31.9 349 2-362 30-419 (471)
37 PRK10077 xylE D-xylose transpo 100.0 2.8E-35 6E-40 275.8 31.8 367 11-385 49-459 (479)
38 TIGR01299 synapt_SV2 synaptic 100.0 2.3E-35 4.9E-40 281.1 29.8 367 2-382 187-733 (742)
39 PF07690 MFS_1: Major Facilita 100.0 9.4E-37 2E-41 274.4 18.9 332 3-349 17-352 (352)
40 TIGR00892 2A0113 monocarboxyla 100.0 1.2E-35 2.6E-40 274.7 26.4 368 2-378 39-416 (455)
41 PRK05122 major facilitator sup 100.0 7.4E-35 1.6E-39 266.4 30.9 349 3-385 36-391 (399)
42 PRK15034 nitrate/nitrite trans 100.0 1.4E-34 3E-39 260.9 31.5 354 2-386 54-457 (462)
43 PRK12382 putative transporter; 100.0 1.4E-34 3E-39 263.9 32.0 347 3-385 36-391 (392)
44 PRK11195 lysophospholipid tran 100.0 6.6E-35 1.4E-39 265.1 29.6 351 5-382 26-379 (393)
45 PRK09874 drug efflux system pr 100.0 1.8E-34 4E-39 264.8 32.5 355 3-384 35-399 (408)
46 PRK09952 shikimate transporter 100.0 2.7E-34 5.8E-39 264.8 33.7 356 8-383 49-433 (438)
47 TIGR00879 SP MFS transporter, 100.0 8.3E-35 1.8E-39 272.7 29.9 375 2-385 48-472 (481)
48 PRK10489 enterobactin exporter 100.0 3.3E-35 7.1E-40 270.1 26.5 354 3-382 38-398 (417)
49 PRK15075 citrate-proton sympor 100.0 1.1E-34 2.4E-39 267.5 29.9 339 2-362 35-398 (434)
50 PRK11043 putative transporter; 100.0 3.8E-34 8.2E-39 261.9 32.5 338 3-366 27-365 (401)
51 TIGR00898 2A0119 cation transp 100.0 2.3E-34 5E-39 271.1 31.5 366 3-387 110-500 (505)
52 PRK10133 L-fucose transporter; 100.0 2.4E-34 5.3E-39 264.2 30.6 350 2-377 46-427 (438)
53 PRK10473 multidrug efflux syst 100.0 5.8E-34 1.3E-38 259.8 32.8 339 3-372 24-363 (392)
54 PRK11652 emrD multidrug resist 100.0 2.1E-33 4.5E-38 256.4 34.0 335 2-363 28-365 (394)
55 PRK11646 multidrug resistance 100.0 7.2E-34 1.6E-38 258.9 30.9 349 7-385 36-390 (400)
56 PRK15011 sugar efflux transpor 100.0 1.7E-33 3.6E-38 256.4 33.2 343 8-382 42-390 (393)
57 PRK03893 putative sialic acid 100.0 2.8E-34 6.1E-39 270.1 27.6 364 2-376 40-446 (496)
58 TIGR00887 2A0109 phosphate:H+ 100.0 1.3E-33 2.9E-38 264.9 31.5 358 13-379 52-485 (502)
59 TIGR00896 CynX cyanate transpo 100.0 9.1E-34 2E-38 255.1 28.8 328 2-360 20-350 (355)
60 cd06174 MFS The Major Facilita 100.0 4.3E-33 9.3E-38 250.4 31.2 329 2-380 19-349 (352)
61 TIGR00902 2A0127 phenyl propri 100.0 3.2E-33 7E-38 253.6 30.2 343 3-377 25-373 (382)
62 PRK10054 putative transporter; 100.0 2.5E-33 5.5E-38 254.9 28.5 348 6-380 32-381 (395)
63 TIGR00895 2A0115 benzoate tran 100.0 7.1E-34 1.5E-38 260.0 24.6 342 3-355 38-397 (398)
64 TIGR00886 2A0108 nitrite extru 100.0 1.3E-33 2.8E-38 255.4 26.0 331 2-344 21-365 (366)
65 TIGR00885 fucP L-fucose:H+ sym 100.0 5.1E-33 1.1E-37 253.3 29.6 348 2-375 23-404 (410)
66 TIGR00883 2A0106 metabolite-pr 100.0 2.2E-33 4.7E-38 256.4 27.0 346 6-373 17-391 (394)
67 PRK11010 ampG muropeptide tran 100.0 3.9E-32 8.5E-37 253.0 32.7 360 3-383 33-403 (491)
68 PRK11128 putative 3-phenylprop 100.0 3.4E-32 7.4E-37 247.0 29.9 344 3-378 25-374 (382)
69 KOG1330 Sugar transporter/spin 100.0 3.3E-34 7.1E-39 248.3 14.0 352 4-362 55-417 (493)
70 PRK11902 ampG muropeptide tran 100.0 1.1E-30 2.5E-35 238.7 32.8 358 3-384 20-391 (402)
71 PRK09528 lacY galactoside perm 100.0 4.8E-31 1E-35 242.6 28.5 358 8-385 37-405 (420)
72 KOG3764 Vesicular amine transp 100.0 7.4E-32 1.6E-36 228.8 20.4 348 10-383 99-454 (464)
73 KOG2533 Permease of the major 100.0 3E-31 6.5E-36 241.4 25.0 254 7-262 71-336 (495)
74 TIGR00882 2A0105 oligosacchari 100.0 4.5E-30 9.7E-35 234.4 30.3 353 8-380 29-392 (396)
75 TIGR00889 2A0110 nucleoside tr 100.0 4.5E-30 9.7E-35 234.9 30.0 354 3-385 24-404 (418)
76 COG2807 CynX Cyanate permease 100.0 9.6E-30 2.1E-34 214.2 29.2 354 1-385 31-387 (395)
77 KOG2504 Monocarboxylate transp 100.0 4.7E-31 1E-35 242.6 23.3 371 2-383 66-476 (509)
78 TIGR00901 2A0125 AmpG-related 100.0 2.5E-30 5.5E-35 232.9 26.4 319 2-342 8-355 (356)
79 KOG0569 Permease of the major 100.0 3.6E-29 7.8E-34 224.7 32.4 365 19-388 62-459 (485)
80 PRK06814 acylglycerophosphoeth 100.0 6.3E-30 1.4E-34 262.6 30.3 346 17-376 52-415 (1140)
81 PF05977 MFS_3: Transmembrane 100.0 1.3E-29 2.9E-34 234.2 29.3 356 6-382 34-393 (524)
82 COG0738 FucP Fucose permease [ 100.0 5.1E-29 1.1E-33 213.1 27.8 355 2-382 33-408 (422)
83 TIGR00924 yjdL_sub1_fam amino 100.0 1.1E-28 2.4E-33 228.8 31.5 377 5-385 33-470 (475)
84 TIGR00805 oat sodium-independe 100.0 4.1E-30 8.9E-35 244.6 21.7 264 2-265 53-397 (633)
85 PRK08633 2-acyl-glycerophospho 100.0 4.9E-29 1.1E-33 256.9 30.8 351 6-374 34-401 (1146)
86 TIGR00792 gph sugar (Glycoside 100.0 2.6E-29 5.7E-34 232.7 24.0 338 5-362 23-384 (437)
87 TIGR02718 sider_RhtX_FptX side 100.0 3.9E-28 8.5E-33 221.2 30.1 351 3-378 22-386 (390)
88 PRK10207 dipeptide/tripeptide 100.0 5E-28 1.1E-32 224.4 29.3 374 5-381 38-474 (489)
89 KOG2615 Permease of the major 100.0 1.1E-28 2.4E-33 208.3 21.6 351 14-375 65-432 (451)
90 KOG0254 Predicted transporter 100.0 6.2E-27 1.3E-31 219.9 28.5 363 17-386 89-486 (513)
91 KOG0253 Synaptic vesicle trans 100.0 9.4E-27 2E-31 195.6 23.5 369 4-388 100-526 (528)
92 PF06609 TRI12: Fungal trichot 100.0 5E-26 1.1E-30 209.7 28.1 345 4-357 66-466 (599)
93 TIGR00806 rfc RFC reduced fola 99.9 1.5E-25 3.2E-30 198.6 23.6 340 2-352 46-409 (511)
94 KOG0255 Synaptic vesicle trans 99.9 1.7E-24 3.7E-29 204.6 31.9 331 10-357 111-467 (521)
95 PF03825 Nuc_H_symport: Nucleo 99.9 8.9E-24 1.9E-28 190.1 31.1 357 4-386 24-398 (400)
96 PTZ00207 hypothetical protein; 99.9 4.8E-24 1E-28 197.9 28.1 371 2-382 47-551 (591)
97 PRK09584 tppB putative tripept 99.9 9.9E-24 2.1E-28 196.9 29.8 369 6-380 46-476 (500)
98 PF00083 Sugar_tr: Sugar (and 99.9 6.3E-31 1.4E-35 244.4 -18.8 364 17-387 46-440 (451)
99 KOG0252 Inorganic phosphate tr 99.9 2.1E-25 4.6E-30 193.1 15.4 359 14-383 81-498 (538)
100 TIGR01301 GPH_sucrose GPH fami 99.9 2E-23 4.3E-28 190.1 28.7 373 5-388 27-476 (477)
101 PF11700 ATG22: Vacuole efflux 99.9 1.2E-22 2.7E-27 186.1 33.0 358 17-386 70-471 (477)
102 TIGR01272 gluP glucose/galacto 99.9 2.2E-23 4.8E-28 182.6 25.0 278 71-373 9-305 (310)
103 PF01306 LacY_symp: LacY proto 99.9 2.7E-23 5.8E-28 183.5 22.6 360 9-388 35-405 (412)
104 PRK09669 putative symporter Ya 99.9 6.5E-23 1.4E-27 189.9 26.3 332 6-362 34-392 (444)
105 KOG4686 Predicted sugar transp 99.9 7.9E-25 1.7E-29 177.7 11.4 355 6-384 68-444 (459)
106 TIGR00788 fbt folate/biopterin 99.9 4.2E-23 9E-28 191.1 22.2 359 4-377 48-437 (468)
107 PF13347 MFS_2: MFS/sugar tran 99.9 9.8E-23 2.1E-27 187.8 22.2 337 5-362 25-388 (428)
108 PRK15462 dipeptide/tripeptide 99.9 1.6E-20 3.4E-25 171.9 32.9 366 8-375 36-469 (493)
109 PRK09848 glucuronide transport 99.9 5.4E-21 1.2E-25 177.4 26.4 333 6-361 33-391 (448)
110 PRK10429 melibiose:sodium symp 99.9 4.1E-21 8.9E-26 179.0 22.8 337 6-361 31-396 (473)
111 COG2270 Permeases of the major 99.9 7.5E-20 1.6E-24 158.3 26.3 354 16-385 57-431 (438)
112 PF03209 PUCC: PUCC protein; 99.9 2.8E-19 6E-24 155.3 29.4 362 7-385 5-400 (403)
113 PRK11462 putative transporter; 99.9 3.7E-19 8E-24 164.8 28.2 330 7-361 35-390 (460)
114 COG2211 MelB Na+/melibiose sym 99.9 1.1E-18 2.4E-23 155.8 27.5 337 8-362 39-400 (467)
115 KOG2563 Permease of the major 99.8 2.8E-19 6.1E-24 155.5 22.0 360 9-383 72-450 (480)
116 COG3104 PTR2 Dipeptide/tripept 99.8 2.5E-18 5.5E-23 152.2 23.3 369 12-382 56-486 (498)
117 PF03137 OATP: Organic Anion T 99.8 2.6E-21 5.5E-26 179.9 -0.1 357 2-358 23-514 (539)
118 KOG2816 Predicted transporter 99.8 3.1E-16 6.8E-21 142.5 24.6 317 26-358 71-392 (463)
119 KOG3626 Organic anion transpor 99.8 3.4E-17 7.3E-22 152.6 18.6 264 2-265 117-459 (735)
120 KOG2325 Predicted transporter/ 99.7 1E-16 2.2E-21 143.7 18.7 359 11-382 65-474 (488)
121 TIGR00880 2_A_01_02 Multidrug 99.7 6.7E-17 1.4E-21 125.0 10.4 137 23-161 4-140 (141)
122 PF03092 BT1: BT1 family; Int 99.7 9E-16 1.9E-20 140.5 16.3 372 4-384 12-414 (433)
123 PF05631 DUF791: Protein of un 99.7 4.4E-14 9.4E-19 121.2 22.5 237 8-262 60-305 (354)
124 TIGR00889 2A0110 nucleoside tr 99.6 3.5E-15 7.6E-20 136.8 14.6 149 16-164 250-407 (418)
125 PRK05122 major facilitator sup 99.6 2.7E-14 5.8E-19 130.8 15.0 152 6-161 240-391 (399)
126 PRK09528 lacY galactoside perm 99.6 1.2E-14 2.6E-19 133.9 12.0 150 12-163 257-407 (420)
127 PRK10489 enterobactin exporter 99.6 3.2E-14 7E-19 131.0 13.0 159 4-164 245-404 (417)
128 PRK10642 proline/glycine betai 99.6 1.8E-13 3.9E-18 128.5 17.3 159 5-166 273-436 (490)
129 TIGR00890 2A0111 Oxalate/Forma 99.6 4.4E-14 9.5E-19 128.2 12.5 147 5-151 228-374 (377)
130 PRK10054 putative transporter; 99.5 2.2E-13 4.7E-18 124.3 16.6 174 198-381 6-180 (395)
131 PRK15011 sugar efflux transpor 99.5 1.6E-13 3.5E-18 125.2 15.4 148 8-158 243-390 (393)
132 cd06174 MFS The Major Facilita 99.5 1.1E-13 2.4E-18 124.2 14.0 149 5-155 198-348 (352)
133 TIGR01299 synapt_SV2 synaptic 99.5 1.6E-13 3.4E-18 132.1 14.9 141 19-163 597-737 (742)
134 PRK09874 drug efflux system pr 99.5 8.7E-14 1.9E-18 127.8 12.4 141 19-161 260-400 (408)
135 PRK11551 putative 3-hydroxyphe 99.5 2.4E-13 5.3E-18 124.8 14.7 152 5-158 243-395 (406)
136 PRK12382 putative transporter; 99.5 1.8E-13 4E-18 125.0 13.4 150 6-159 240-389 (392)
137 PRK15462 dipeptide/tripeptide 99.5 1.1E-12 2.5E-17 120.5 18.2 176 198-381 8-187 (493)
138 PRK03893 putative sialic acid 99.5 1.8E-13 3.8E-18 129.1 13.1 146 5-150 298-444 (496)
139 COG2271 UhpC Sugar phosphate p 99.5 2.9E-13 6.3E-18 117.7 12.6 179 199-387 29-210 (448)
140 PRK11663 regulatory protein Uh 99.5 1.1E-12 2.4E-17 121.3 17.3 170 200-379 24-194 (434)
141 PRK03545 putative arabinose tr 99.5 9.1E-13 2E-17 120.3 16.4 149 7-159 231-380 (390)
142 TIGR00899 2A0120 sugar efflux 99.5 5.6E-13 1.2E-17 121.0 14.9 146 8-156 226-371 (375)
143 PRK09584 tppB putative tripept 99.5 2.7E-12 5.8E-17 120.3 19.6 179 195-380 16-198 (500)
144 PRK03633 putative MFS family t 99.5 7.3E-13 1.6E-17 120.5 15.4 147 5-156 223-369 (381)
145 PRK09556 uhpT sugar phosphate 99.5 3E-13 6.6E-18 126.3 13.2 150 5-156 281-446 (467)
146 TIGR00892 2A0113 monocarboxyla 99.5 1.3E-13 2.7E-18 128.1 10.4 147 5-153 264-415 (455)
147 TIGR00902 2A0127 phenyl propri 99.5 7E-13 1.5E-17 120.6 14.8 146 5-154 228-374 (382)
148 TIGR00924 yjdL_sub1_fam amino 99.5 2.7E-12 6E-17 119.5 18.5 177 197-382 7-191 (475)
149 PRK11646 multidrug resistance 99.5 1.7E-12 3.8E-17 118.6 16.8 171 202-382 13-184 (400)
150 PF01770 Folate_carrier: Reduc 99.5 1.3E-10 2.7E-15 103.0 27.2 332 6-348 28-392 (412)
151 PRK10207 dipeptide/tripeptide 99.5 4.8E-12 1E-16 118.0 18.6 176 199-381 14-192 (489)
152 TIGR00879 SP MFS transporter, 99.4 9.8E-13 2.1E-17 123.4 13.4 159 5-163 307-474 (481)
153 PRK09705 cynX putative cyanate 99.4 3E-12 6.5E-17 116.8 15.2 158 5-165 228-387 (393)
154 PF07690 MFS_1: Major Facilita 99.4 2.2E-12 4.8E-17 115.9 14.2 167 205-379 2-168 (352)
155 PRK10504 putative transporter; 99.4 4.8E-12 1E-16 118.6 16.7 175 199-382 10-184 (471)
156 PRK10077 xylE D-xylose transpo 99.4 2.2E-12 4.8E-17 121.1 14.3 159 6-164 295-462 (479)
157 TIGR00710 efflux_Bcr_CflA drug 99.4 5.8E-12 1.3E-16 114.8 16.6 170 203-382 9-179 (385)
158 PRK11010 ampG muropeptide tran 99.4 3.5E-11 7.5E-16 112.7 21.5 152 6-158 247-402 (491)
159 TIGR00903 2A0129 major facilit 99.4 6.8E-12 1.5E-16 112.9 16.1 162 212-384 4-166 (368)
160 PLN00028 nitrate transmembrane 99.4 1.7E-11 3.6E-16 114.6 19.2 162 210-382 47-218 (476)
161 PRK03699 putative transporter; 99.4 1.8E-12 3.9E-17 118.4 12.3 150 5-157 228-378 (394)
162 TIGR00900 2A0121 H+ Antiporter 99.4 4E-12 8.6E-17 114.9 14.5 172 203-382 3-178 (365)
163 PRK10091 MFS transport protein 99.4 1E-11 2.2E-16 113.0 16.5 173 199-381 3-176 (382)
164 PRK14995 methyl viologen resis 99.4 1.4E-11 3E-16 115.9 17.1 172 201-382 8-181 (495)
165 PRK10213 nepI ribonucleoside t 99.4 2.2E-11 4.7E-16 111.1 17.6 156 214-379 35-191 (394)
166 TIGR00886 2A0108 nitrite extru 99.4 2.2E-11 4.7E-16 110.2 17.4 166 200-375 2-180 (366)
167 COG2814 AraJ Arabinose efflux 99.4 2.2E-11 4.7E-16 107.3 16.5 176 199-384 13-189 (394)
168 PRK11043 putative transporter; 99.4 3.8E-11 8.2E-16 110.1 17.5 168 207-383 11-181 (401)
169 TIGR00897 2A0118 polyol permea 99.4 3.1E-11 6.7E-16 110.6 16.7 173 198-378 12-188 (402)
170 PF05977 MFS_3: Transmembrane 99.4 1.7E-11 3.6E-16 114.3 15.0 151 4-156 240-391 (524)
171 TIGR00711 efflux_EmrB drug res 99.4 1.7E-11 3.7E-16 115.3 15.4 171 202-382 5-176 (485)
172 TIGR02332 HpaX 4-hydroxyphenyl 99.4 3.1E-11 6.6E-16 110.8 16.6 171 202-382 11-188 (412)
173 PRK15034 nitrate/nitrite trans 99.4 2.4E-11 5.2E-16 110.7 15.1 179 198-384 33-233 (462)
174 TIGR00882 2A0105 oligosacchari 99.4 2.1E-11 4.5E-16 111.6 14.9 178 198-382 1-182 (396)
175 PRK10473 multidrug efflux syst 99.3 5.3E-11 1.1E-15 108.8 17.5 171 202-382 6-177 (392)
176 PRK11273 glpT sn-glycerol-3-ph 99.3 1.1E-11 2.4E-16 115.2 13.0 155 5-159 276-435 (452)
177 PRK11128 putative 3-phenylprop 99.3 2.3E-11 5E-16 110.7 14.6 143 6-152 229-372 (382)
178 TIGR00883 2A0106 metabolite-pr 99.3 6.4E-12 1.4E-16 114.7 10.6 145 5-149 242-391 (394)
179 PRK12307 putative sialic acid 99.3 1.5E-11 3.3E-16 113.6 13.0 136 5-140 254-389 (426)
180 TIGR00893 2A0114 d-galactonate 99.3 2.3E-11 5.1E-16 111.0 14.0 146 8-156 242-396 (399)
181 TIGR00712 glpT glycerol-3-phos 99.3 3.6E-11 7.7E-16 111.5 15.3 176 199-382 27-205 (438)
182 TIGR00895 2A0115 benzoate tran 99.3 4E-11 8.6E-16 109.7 15.1 165 207-381 25-190 (398)
183 TIGR00891 2A0112 putative sial 99.3 7.7E-11 1.7E-15 108.1 16.8 167 201-377 14-183 (405)
184 PRK11195 lysophospholipid tran 99.3 3.7E-11 8E-16 109.6 14.1 168 198-378 2-169 (393)
185 PRK15402 multidrug efflux syst 99.3 1.2E-10 2.5E-15 107.1 17.4 159 214-382 28-187 (406)
186 PF11700 ATG22: Vacuole efflux 99.3 7.7E-11 1.7E-15 108.7 15.6 149 8-158 308-467 (477)
187 PF06963 FPN1: Ferroportin1 (F 99.3 7.7E-10 1.7E-14 99.8 21.0 326 22-352 43-412 (432)
188 PRK11102 bicyclomycin/multidru 99.3 6.7E-11 1.5E-15 107.5 14.5 159 214-382 6-165 (377)
189 PRK11652 emrD multidrug resist 99.3 1.7E-10 3.6E-15 105.6 16.8 168 203-381 12-181 (394)
190 PRK09952 shikimate transporter 99.3 1.1E-10 2.4E-15 108.1 15.6 153 8-161 277-434 (438)
191 TIGR02718 sider_RhtX_FptX side 99.3 9.5E-11 2.1E-15 107.0 14.7 149 5-153 231-385 (390)
192 PRK15403 multidrug efflux syst 99.3 3.2E-10 7E-15 104.1 17.2 157 214-381 31-189 (413)
193 TIGR00926 2A1704 Peptide:H+ sy 99.3 6.9E-09 1.5E-13 99.2 26.2 152 6-157 12-180 (654)
194 PRK15075 citrate-proton sympor 99.2 1.2E-10 2.7E-15 107.7 13.6 135 5-139 261-399 (434)
195 TIGR00881 2A0104 phosphoglycer 99.2 7.7E-11 1.7E-15 107.0 12.0 165 208-382 4-170 (379)
196 TIGR00792 gph sugar (Glycoside 99.2 1.6E-10 3.4E-15 107.3 14.1 123 15-138 255-384 (437)
197 PRK11902 ampG muropeptide tran 99.2 3.7E-10 8E-15 103.5 15.5 146 6-156 234-387 (402)
198 TIGR00769 AAA ADP/ATP carrier 99.2 1.7E-07 3.7E-12 85.8 32.2 255 6-265 27-333 (472)
199 TIGR00885 fucP L-fucose:H+ sym 99.2 1.1E-09 2.3E-14 100.4 18.2 171 201-379 5-203 (410)
200 TIGR00887 2A0109 phosphate:H+ 99.2 2.9E-10 6.3E-15 107.3 13.7 159 5-164 311-493 (502)
201 KOG3098 Uncharacterized conser 99.2 1.6E-08 3.5E-13 91.3 23.6 315 23-355 56-411 (461)
202 PF01306 LacY_symp: LacY proto 99.2 5.2E-10 1.1E-14 99.7 13.4 149 15-165 257-406 (412)
203 PRK06814 acylglycerophosphoeth 99.2 9.4E-10 2E-14 114.2 17.2 184 194-382 6-194 (1140)
204 PRK10133 L-fucose transporter; 99.2 2.5E-09 5.4E-14 98.9 17.8 148 200-356 27-177 (438)
205 PF06813 Nodulin-like: Nodulin 99.1 8.7E-10 1.9E-14 91.9 13.0 158 3-163 23-185 (250)
206 TIGR00806 rfc RFC reduced fola 99.1 1.4E-09 3.1E-14 97.7 15.2 158 218-386 44-206 (511)
207 PF02487 CLN3: CLN3 protein; 99.1 1.9E-08 4.2E-13 89.2 21.8 318 19-355 61-394 (402)
208 COG2223 NarK Nitrate/nitrite t 99.1 2.3E-09 5E-14 93.8 15.6 174 200-383 15-193 (417)
209 COG2270 Permeases of the major 99.1 4.1E-10 8.8E-15 98.5 11.0 142 9-152 280-422 (438)
210 KOG3762 Predicted transporter 99.1 2.4E-09 5.2E-14 96.1 15.5 179 194-382 366-546 (618)
211 TIGR00896 CynX cyanate transpo 99.1 1.6E-09 3.5E-14 97.6 14.7 149 216-375 17-167 (355)
212 TIGR00880 2_A_01_02 Multidrug 99.1 8.5E-10 1.9E-14 84.8 11.1 137 240-384 3-139 (141)
213 TIGR00894 2A0114euk Na(+)-depe 99.1 1.1E-09 2.4E-14 102.5 13.6 147 229-382 70-218 (465)
214 TIGR00898 2A0119 cation transp 99.1 1.4E-09 2.9E-14 103.0 14.0 140 21-163 359-498 (505)
215 PRK09848 glucuronide transport 99.1 1.8E-09 3.9E-14 100.5 14.5 129 9-137 256-391 (448)
216 KOG2504 Monocarboxylate transp 99.1 3.4E-10 7.4E-15 105.1 9.1 154 4-159 320-476 (509)
217 COG3104 PTR2 Dipeptide/tripept 99.1 2.9E-09 6.3E-14 95.3 14.2 184 195-385 16-208 (498)
218 PF03825 Nuc_H_symport: Nucleo 99.1 4.1E-09 8.8E-14 95.5 15.3 153 8-161 233-397 (400)
219 TIGR01272 gluP glucose/galacto 99.1 3.2E-09 6.9E-14 93.3 14.1 132 11-147 172-303 (310)
220 PRK10406 alpha-ketoglutarate t 99.1 1.2E-08 2.6E-13 94.5 17.6 159 207-375 30-211 (432)
221 PRK08633 2-acyl-glycerophospho 99.0 2E-09 4.3E-14 112.1 13.0 141 8-150 259-401 (1146)
222 KOG0637 Sucrose transporter an 99.0 7.3E-09 1.6E-13 91.3 14.0 363 5-377 55-491 (498)
223 KOG3764 Vesicular amine transp 99.0 1.1E-09 2.3E-14 94.8 8.2 147 230-385 101-249 (464)
224 TIGR00788 fbt folate/biopterin 99.0 5.2E-09 1.1E-13 97.4 13.3 125 10-136 281-415 (468)
225 KOG3762 Predicted transporter 99.0 1.1E-09 2.4E-14 98.2 8.2 146 10-157 399-545 (618)
226 TIGR00901 2A0125 AmpG-related 99.0 9.8E-09 2.1E-13 92.5 14.5 155 217-382 6-177 (356)
227 PF06609 TRI12: Fungal trichot 99.0 2.8E-08 6.1E-13 93.0 17.5 175 196-382 37-216 (599)
228 KOG0569 Permease of the major 99.0 2E-08 4.3E-13 91.6 15.9 158 8-166 296-461 (485)
229 COG0477 ProP Permeases of the 99.0 6.7E-09 1.5E-13 91.3 12.9 147 5-151 25-177 (338)
230 TIGR01301 GPH_sucrose GPH fami 99.0 1.5E-08 3.2E-13 93.3 14.5 177 200-385 5-220 (477)
231 TIGR00805 oat sodium-independe 99.0 2.5E-08 5.5E-13 96.0 16.1 157 224-382 57-280 (633)
232 KOG1330 Sugar transporter/spin 98.9 7.6E-10 1.7E-14 97.7 4.2 175 201-385 35-211 (493)
233 KOG4332 Predicted sugar transp 98.9 5.2E-08 1.1E-12 79.9 14.1 345 8-379 63-427 (454)
234 PRK10429 melibiose:sodium symp 98.9 2.8E-08 6.1E-13 93.1 14.5 130 8-137 257-396 (473)
235 PTZ00207 hypothetical protein; 98.9 6.1E-08 1.3E-12 91.2 16.6 157 215-382 43-204 (591)
236 PRK09669 putative symporter Ya 98.9 2.6E-08 5.6E-13 92.6 13.9 122 16-137 263-391 (444)
237 KOG2615 Permease of the major 98.9 8E-09 1.7E-13 89.0 9.3 118 231-357 64-181 (451)
238 KOG4686 Predicted sugar transp 98.9 1.1E-08 2.4E-13 84.5 9.3 132 8-143 291-426 (459)
239 COG2807 CynX Cyanate permease 98.9 5.1E-08 1.1E-12 83.8 12.8 152 5-159 231-385 (395)
240 KOG0253 Synaptic vesicle trans 98.8 1E-08 2.2E-13 87.9 7.6 131 27-163 391-523 (528)
241 KOG2532 Permease of the major 98.8 1E-07 2.2E-12 87.8 13.3 147 229-384 67-217 (466)
242 KOG3810 Micronutrient transpor 98.8 2E-07 4.3E-12 79.4 13.0 360 11-385 35-423 (433)
243 KOG3574 Acetyl-CoA transporter 98.8 1.1E-06 2.3E-11 76.0 17.4 340 4-360 52-433 (510)
244 PF13347 MFS_2: MFS/sugar tran 98.7 1.8E-07 3.9E-12 86.5 13.1 123 15-137 258-387 (428)
245 COG0738 FucP Fucose permease [ 98.7 2.2E-06 4.8E-11 75.0 17.1 162 215-383 28-210 (422)
246 PF06779 DUF1228: Protein of u 98.7 5.8E-08 1.3E-12 65.5 5.8 72 2-75 12-83 (85)
247 COG2211 MelB Na+/melibiose sym 98.6 1.1E-06 2.5E-11 79.5 15.0 127 11-137 266-399 (467)
248 PRK11462 putative transporter; 98.6 1.1E-06 2.5E-11 81.8 14.3 123 15-137 261-390 (460)
249 PF05978 UNC-93: Ion channel r 98.5 4.6E-06 9.9E-11 64.4 12.4 108 22-132 42-149 (156)
250 KOG2533 Permease of the major 98.4 2.1E-06 4.6E-11 79.4 11.7 148 228-383 74-227 (495)
251 PF06813 Nodulin-like: Nodulin 98.4 3.7E-06 8E-11 70.4 11.8 160 214-382 17-181 (250)
252 KOG0254 Predicted transporter 98.4 1.3E-05 2.7E-10 76.1 16.8 133 237-378 91-225 (513)
253 PF03219 TLC: TLC ATP/ADP tran 98.4 0.0015 3.2E-08 60.7 29.4 247 15-265 56-349 (491)
254 KOG0255 Synaptic vesicle trans 98.4 3.5E-06 7.6E-11 80.1 12.4 140 230-381 113-253 (521)
255 PF03209 PUCC: PUCC protein; 98.4 2.1E-05 4.6E-10 69.5 15.0 148 9-156 236-395 (403)
256 KOG1237 H+/oligopeptide sympor 98.3 0.00018 3.8E-09 68.1 21.3 151 6-156 62-242 (571)
257 PF13000 Acatn: Acetyl-coenzym 98.3 6.9E-05 1.5E-09 67.7 17.2 348 4-358 22-467 (544)
258 PF00854 PTR2: POT family; In 98.3 7E-06 1.5E-10 74.4 11.5 110 48-157 2-121 (372)
259 PF05631 DUF791: Protein of un 98.3 0.00021 4.6E-09 62.3 19.3 147 229-385 63-218 (354)
260 PF00083 Sugar_tr: Sugar (and 98.2 1.5E-08 3.3E-13 94.4 -8.6 159 5-165 276-442 (451)
261 PF12832 MFS_1_like: MFS_1 lik 98.2 1.7E-05 3.6E-10 53.3 8.1 64 203-267 4-67 (77)
262 PF12832 MFS_1_like: MFS_1 lik 98.1 5.4E-06 1.2E-10 55.7 5.1 55 3-57 21-75 (77)
263 KOG2816 Predicted transporter 98.1 0.00012 2.5E-09 67.5 15.4 129 245-385 72-201 (463)
264 TIGR00926 2A1704 Peptide:H+ sy 98.1 0.00013 2.7E-09 70.4 16.2 163 214-383 2-182 (654)
265 PF07672 MFS_Mycoplasma: Mycop 98.1 0.00013 2.8E-09 60.4 13.2 101 104-212 2-107 (267)
266 KOG0252 Inorganic phosphate tr 98.1 1.9E-06 4.2E-11 76.5 2.2 128 32-165 363-503 (538)
267 KOG2325 Predicted transporter/ 98.0 0.00017 3.7E-09 65.9 13.1 177 200-383 35-229 (488)
268 TIGR00939 2a57 Equilibrative N 97.9 0.0016 3.4E-08 60.0 17.9 58 295-352 371-428 (437)
269 KOG3880 Predicted small molecu 97.9 0.00011 2.3E-09 62.1 8.9 317 19-353 64-399 (409)
270 KOG2563 Permease of the major 97.8 0.00031 6.6E-09 62.8 12.1 150 200-359 42-203 (480)
271 KOG1479 Nucleoside transporter 97.6 0.0075 1.6E-07 53.8 16.3 133 215-356 259-402 (406)
272 PF03092 BT1: BT1 family; Int 97.5 0.00097 2.1E-08 61.6 11.1 155 221-383 11-175 (433)
273 PF06963 FPN1: Ferroportin1 (F 97.5 0.011 2.4E-07 54.0 17.1 181 200-380 3-197 (432)
274 PF05978 UNC-93: Ion channel r 97.3 0.016 3.5E-07 44.9 13.5 110 239-357 41-150 (156)
275 PF01770 Folate_carrier: Reduc 97.2 0.015 3.4E-07 52.3 14.7 162 215-386 19-185 (412)
276 COG3202 ATP/ADP translocase [E 97.2 0.16 3.5E-06 46.5 30.0 255 8-265 49-352 (509)
277 PRK03612 spermidine synthase; 97.0 0.036 7.8E-07 52.5 15.8 166 204-376 19-190 (521)
278 TIGR00769 AAA ADP/ATP carrier 96.9 0.047 1E-06 50.7 15.2 149 200-357 8-190 (472)
279 PRK03612 spermidine synthase; 96.8 0.047 1E-06 51.7 14.4 139 11-152 44-190 (521)
280 PF06779 DUF1228: Protein of u 96.7 0.015 3.3E-07 39.5 7.6 53 212-265 5-57 (85)
281 COG0477 ProP Permeases of the 96.5 0.1 2.2E-06 45.2 14.1 151 213-372 16-174 (338)
282 KOG3098 Uncharacterized conser 95.7 0.16 3.4E-06 46.9 11.1 103 27-130 289-410 (461)
283 PF02487 CLN3: CLN3 protein; 95.6 0.13 2.8E-06 46.5 9.9 114 16-133 280-396 (402)
284 KOG0637 Sucrose transporter an 95.3 0.036 7.8E-07 50.1 5.5 148 199-353 32-200 (498)
285 KOG3626 Organic anion transpor 94.9 0.78 1.7E-05 44.8 13.5 183 199-384 96-344 (735)
286 PF01733 Nucleoside_tran: Nucl 94.9 0.0051 1.1E-07 54.1 -0.8 114 239-352 186-304 (309)
287 PF00854 PTR2: POT family; In 94.8 0.21 4.6E-06 45.3 9.3 87 297-383 34-123 (372)
288 PF03137 OATP: Organic Anion T 94.6 0.008 1.7E-07 57.0 -0.4 143 213-357 16-202 (539)
289 KOG1479 Nucleoside transporter 93.8 3.8 8.3E-05 37.1 14.5 178 199-380 18-201 (406)
290 KOG2601 Iron transporter [Inor 92.9 0.98 2.1E-05 40.1 9.0 175 198-374 26-217 (503)
291 PF07857 DUF1632: CEO family ( 92.6 2.7 5.9E-05 35.5 11.2 40 205-244 184-227 (254)
292 KOG1237 H+/oligopeptide sympor 92.5 7.1 0.00015 37.7 15.2 177 203-381 41-243 (571)
293 KOG3574 Acetyl-CoA transporter 91.9 1.9 4E-05 38.7 9.5 68 199-270 31-103 (510)
294 KOG3097 Predicted membrane pro 91.4 9.5 0.00021 33.6 15.3 72 27-101 68-139 (390)
295 KOG2601 Iron transporter [Inor 88.9 5.2 0.00011 35.8 9.7 126 25-150 71-217 (503)
296 KOG4332 Predicted sugar transp 87.4 7.8 0.00017 33.1 9.5 134 19-154 284-426 (454)
297 PF02990 EMP70: Endomembrane p 85.5 27 0.00059 33.4 13.5 28 242-269 304-331 (521)
298 KOG3880 Predicted small molecu 82.4 6 0.00013 34.5 6.8 76 55-132 327-402 (409)
299 KOG4830 Predicted sugar transp 82.3 1.5 3.3E-05 36.9 3.2 158 189-351 191-350 (412)
300 TIGR00939 2a57 Equilibrative N 82.3 9.4 0.0002 35.5 8.8 61 71-131 371-431 (437)
301 COG5336 Uncharacterized protei 79.3 14 0.0003 26.2 6.6 42 327-368 37-79 (116)
302 PF05255 UPF0220: Uncharacteri 77.7 19 0.00042 28.2 7.8 57 99-155 13-75 (166)
303 KOG3810 Micronutrient transpor 76.6 12 0.00025 33.4 6.9 95 20-116 274-370 (433)
304 COG4262 Predicted spermidine s 73.4 69 0.0015 28.7 12.1 55 206-260 14-68 (508)
305 PF06912 DUF1275: Protein of u 73.3 50 0.0011 27.1 12.9 38 103-140 157-194 (209)
306 KOG3097 Predicted membrane pro 67.9 90 0.0019 27.8 10.8 60 199-265 29-88 (390)
307 PRK13629 threonine/serine tran 64.7 1.2E+02 0.0027 28.2 16.0 44 102-150 18-61 (443)
308 PF01733 Nucleoside_tran: Nucl 62.3 2.9 6.2E-05 36.8 0.3 105 22-129 187-305 (309)
309 PF03706 UPF0104: Uncharacteri 60.8 1.1E+02 0.0024 26.4 12.5 52 13-64 23-74 (294)
310 COG5336 Uncharacterized protei 56.5 40 0.00086 24.0 5.0 37 20-56 45-82 (116)
311 PF11368 DUF3169: Protein of u 55.3 1E+02 0.0023 26.1 8.6 25 107-131 9-33 (248)
312 KOG4830 Predicted sugar transp 54.6 27 0.00058 29.8 4.6 61 206-267 24-93 (412)
313 PF03596 Cad: Cadmium resistan 52.0 1.1E+02 0.0025 24.7 7.7 11 218-228 113-123 (191)
314 PF11947 DUF3464: Protein of u 50.4 79 0.0017 24.4 6.2 82 39-123 56-145 (153)
315 PF13386 DsbD_2: Cytochrome C 50.0 1.4E+02 0.003 24.2 13.4 35 231-265 146-180 (199)
316 PF02694 UPF0060: Uncharacteri 48.8 44 0.00095 23.8 4.3 53 16-68 53-105 (107)
317 PF03606 DcuC: C4-dicarboxylat 47.4 2.5E+02 0.0055 26.5 10.7 27 330-356 403-429 (465)
318 PF11947 DUF3464: Protein of u 46.5 67 0.0015 24.8 5.3 27 321-347 119-145 (153)
319 KOG1278 Endosomal membrane pro 46.4 66 0.0014 30.5 6.2 31 232-262 356-386 (628)
320 PRK10263 DNA translocase FtsK; 46.3 4.2E+02 0.0091 28.8 12.5 34 343-376 142-175 (1355)
321 COG1268 BioY Uncharacterized c 46.0 91 0.002 25.0 6.2 23 24-46 89-111 (184)
322 PF11299 DUF3100: Protein of u 45.9 27 0.00058 28.9 3.3 99 6-128 128-226 (241)
323 COG4769 Predicted membrane pro 43.5 31 0.00067 26.8 3.1 53 25-85 81-133 (181)
324 PRK02237 hypothetical protein; 42.6 77 0.0017 22.7 4.7 52 17-68 56-107 (109)
325 PF15061 DUF4538: Domain of un 42.2 29 0.00063 21.5 2.3 25 135-159 3-27 (58)
326 PF10183 ESSS: ESSS subunit of 42.1 39 0.00085 24.2 3.4 33 131-163 53-85 (105)
327 PF00909 Ammonium_transp: Ammo 41.6 2.9E+02 0.0062 25.5 11.9 30 104-133 107-136 (399)
328 COG1288 Predicted membrane pro 41.3 3E+02 0.0065 25.6 10.9 23 131-153 212-234 (481)
329 PRK00293 dipZ thiol:disulfide 40.0 3.7E+02 0.008 26.3 18.3 30 233-262 323-352 (571)
330 COG1457 CodB Purine-cytosine p 39.8 3.2E+02 0.007 25.6 22.0 147 98-265 11-158 (442)
331 PF13000 Acatn: Acetyl-coenzym 39.4 3.5E+02 0.0076 25.9 10.1 62 77-138 410-471 (544)
332 PF07760 DUF1616: Protein of u 38.0 2.7E+02 0.0059 24.2 10.5 57 75-132 22-78 (287)
333 PF06783 UPF0239: Uncharacteri 37.8 64 0.0014 21.9 3.6 20 138-157 23-42 (85)
334 PF09527 ATPase_gene1: Putativ 37.5 97 0.0021 18.9 5.6 37 24-60 7-44 (55)
335 PF02632 BioY: BioY family; I 36.5 1.6E+02 0.0034 22.7 6.1 25 24-48 60-84 (148)
336 PF03741 TerC: Integral membra 35.5 2.3E+02 0.0051 22.7 15.6 57 87-145 11-67 (183)
337 PF02667 SCFA_trans: Short cha 35.4 2.1E+02 0.0045 26.8 7.6 13 34-46 77-89 (453)
338 PF01925 TauE: Sulfite exporte 34.4 2.7E+02 0.0059 23.1 10.2 22 244-265 202-223 (240)
339 PF07672 MFS_Mycoplasma: Mycop 34.3 3E+02 0.0065 23.6 9.3 67 20-86 144-218 (267)
340 PF11833 DUF3353: Protein of u 33.2 2.7E+02 0.0058 22.7 8.5 50 103-152 136-187 (194)
341 COG4262 Predicted spermidine s 32.0 4E+02 0.0086 24.3 12.0 87 13-99 39-132 (508)
342 TIGR00267 conserved hypothetic 31.8 2.6E+02 0.0056 22.1 8.8 28 245-272 123-150 (169)
343 KOG1277 Endosomal membrane pro 30.7 4.6E+02 0.0099 24.6 9.6 22 248-269 340-361 (593)
344 COG3162 Predicted membrane pro 30.2 2E+02 0.0043 20.3 7.3 41 189-229 12-54 (102)
345 COG3559 TnrB3 Putative exporte 30.1 4.6E+02 0.0099 24.4 13.1 65 197-261 296-370 (536)
346 PF06645 SPC12: Microsomal sig 29.8 1.1E+02 0.0024 20.3 3.8 38 111-151 11-48 (76)
347 PF11511 RhodobacterPufX: Intr 29.5 1.6E+02 0.0035 19.0 4.5 31 137-167 30-60 (67)
348 PF02694 UPF0060: Uncharacteri 28.9 77 0.0017 22.6 3.0 33 235-267 54-86 (107)
349 PLN02332 membrane bound O-acyl 28.1 3.9E+02 0.0085 25.3 8.5 30 45-76 339-368 (465)
350 PF02554 CstA: Carbon starvati 27.9 4.7E+02 0.01 23.8 15.1 36 98-138 47-83 (376)
351 COG3619 Predicted membrane pro 26.8 3.8E+02 0.0082 22.4 15.9 122 16-137 54-197 (226)
352 PF04226 Transgly_assoc: Trans 26.7 1.5E+02 0.0032 17.6 5.0 34 123-156 6-43 (48)
353 PF03219 TLC: TLC ATP/ADP tran 26.3 5.8E+02 0.013 24.4 22.9 51 328-378 315-365 (491)
354 PF04341 DUF485: Protein of un 25.8 2.3E+02 0.005 19.6 7.2 64 192-258 7-72 (91)
355 TIGR03644 marine_trans_1 proba 25.7 4.7E+02 0.01 24.2 8.3 41 87-128 304-344 (404)
356 PF04018 DUF368: Domain of unk 25.5 4.3E+02 0.0093 22.6 15.5 40 340-379 193-235 (257)
357 PRK02237 hypothetical protein; 25.5 1.3E+02 0.0028 21.6 3.6 33 235-267 56-88 (109)
358 PRK11588 hypothetical protein; 25.3 6.1E+02 0.013 24.3 13.4 32 37-68 136-169 (506)
359 PF12273 RCR: Chitin synthesis 24.9 36 0.00078 25.4 0.9 12 138-149 1-12 (130)
360 PRK12489 anaerobic C4-dicarbox 24.7 5.9E+02 0.013 23.9 16.9 23 247-269 279-301 (443)
361 TIGR00836 amt ammonium transpo 24.6 3.7E+02 0.0081 24.8 7.4 47 82-128 285-331 (403)
362 PF04024 PspC: PspC domain; I 24.3 1.9E+02 0.0042 18.2 4.4 33 131-163 20-60 (61)
363 TIGR01478 STEVOR variant surfa 23.6 1.5E+02 0.0032 25.6 4.3 29 359-387 259-287 (295)
364 PTZ00370 STEVOR; Provisional 23.6 1.4E+02 0.0031 25.7 4.2 30 358-387 254-283 (296)
365 PF12805 FUSC-like: FUSC-like 23.5 4.2E+02 0.009 23.0 7.4 17 52-68 4-20 (284)
366 PRK15049 L-asparagine permease 23.0 6.7E+02 0.014 23.9 10.4 17 136-152 446-462 (499)
367 PF07456 Hpre_diP_synt_I: Hept 22.3 2.7E+02 0.0058 21.5 5.1 50 24-81 68-117 (148)
368 PF11298 DUF3099: Protein of u 22.2 2.3E+02 0.0049 18.8 4.1 30 39-68 9-38 (73)
369 COG1983 PspC Putative stress-r 21.9 2.4E+02 0.0053 18.5 4.2 34 131-164 21-65 (70)
370 PF00909 Ammonium_transp: Ammo 21.8 3.5E+02 0.0076 24.9 6.8 48 80-127 278-325 (399)
371 PF13493 DUF4118: Domain of un 21.4 1.3E+02 0.0029 21.0 3.3 23 25-47 83-105 (105)
372 COG2076 EmrE Membrane transpor 20.8 3.3E+02 0.0072 19.6 6.0 55 33-88 16-70 (106)
373 TIGR03173 pbuX xanthine permea 20.3 4.6E+02 0.01 24.2 7.4 102 5-108 15-117 (406)
374 PF13940 Ldr_toxin: Toxin Ldr, 20.1 1.6E+02 0.0036 15.9 2.5 19 243-261 16-34 (35)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-43 Score=308.00 Aligned_cols=356 Identities=21% Similarity=0.283 Sum_probs=293.7
Q ss_pred ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Q 016374 3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFM 82 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 82 (390)
..+|++.+|+|+|..+.|+..|.|.++..++.|+...+.||+.||++++..+.++.++++++++++ ||+.++++|++.
T Consensus 34 gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp--~f~~Ll~aR~~~ 111 (394)
T COG2814 34 GLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAP--SFAVLLLARALA 111 (394)
T ss_pred hchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred hhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCC
Q 016374 83 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 162 (390)
Q Consensus 83 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (390)
|+..|..++...++..|..||+||++++++...+..++.++|.+++.++.|.+|||.+|++.+.++++..+..+...|
T Consensus 112 g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP-- 189 (394)
T COG2814 112 GLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP-- 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999888888888
Q ss_pred CCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhh
Q 016374 163 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV 242 (390)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 242 (390)
|++.++..+.+ ..+..+++|+|+++...+..++...+.+..++|+.++++|..|+|++..++...
T Consensus 190 ~~~~~~~~~~~---------------~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll 254 (394)
T COG2814 190 PSEISGSLPGP---------------LRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLL 254 (394)
T ss_pred CccCCCCCCcc---------------hhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHH
Confidence 11111111110 112335899999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHH-HHHHHHHhhhccccccccchh
Q 016374 243 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYSN 321 (390)
Q Consensus 243 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 321 (390)
.++++.++|+.++|++.|| +.|+. ............... ....++.+.. ....+.++.............
T Consensus 255 ~~Gv~~~~Gn~~gGrl~dr-~~~~~-------l~~~~~l~a~~~l~l-~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~ 325 (394)
T COG2814 255 AFGIAGFIGNLLGGRLADR-GPRRA-------LIAALLLLALALLAL-TFTGASPALALALLFLWGFAFSPALQGLQTRL 325 (394)
T ss_pred HHHHHHHHHHHHHhhhccc-cchhH-------HHHHHHHHHHHHHHH-HHhcchHHHHHHHHHHHHHHhhhhhhHHHHHh
Confidence 9999999999999999999 55521 222212222222222 2222333333 333333333333322222222
Q ss_pred ccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhcCCC
Q 016374 322 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK 387 (390)
Q Consensus 322 ~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (390)
.+..||.+..+.+++....++|...|..++|.+.|+.|+....+..+...+++..+.....+++|
T Consensus 326 -a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~~~ 390 (394)
T COG2814 326 -ARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARKDR 390 (394)
T ss_pred -cccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33667999999999999999999999999999999999999999999999999888776655443
No 2
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-43 Score=303.33 Aligned_cols=374 Identities=17% Similarity=0.222 Sum_probs=304.5
Q ss_pred CcccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Q 016374 1 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 80 (390)
Q Consensus 1 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 80 (390)
++.+.|++.||.++|.+|+|.+.+.+.+.+.++..+.|.++||.+.|+.+..++++.++.++++++++ +.+.+.+..+
T Consensus 48 F~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~--s~~~~~~l~~ 125 (448)
T COG2271 48 FNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSP--SLFLFAVLWV 125 (448)
T ss_pred HhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhh--HHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhH--HHHhhhcCChHHHHHHHHHHHHHHHHHHhh
Q 016374 81 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS--PFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 158 (390)
Q Consensus 81 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 158 (390)
++|..+|..+|++...+.+|+|++|||+..++++.+.++|..+.|++. +.+.++.+||..|++.++++++..+..++.
T Consensus 126 lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 126 LNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred HHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 889988999999999999999999999999
Q ss_pred ccCCCCCCCCCchhhhhhhhhcc-cCCCCC-----CcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCC
Q 016374 159 AHSSPAEDPQLRPAEKKLIVSSC-ASKEPV-----KTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF 232 (390)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 232 (390)
.+|+|++..-.+.++.+....+. +++++. ++.-.+.+++||.+|.+++..++.+...+++..|.|.|+.|..|+
T Consensus 206 ~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~ 285 (448)
T COG2271 206 LRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGF 285 (448)
T ss_pred hCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCC
Confidence 99998866544333322211111 111111 123455688999999999999999999999999999999999999
Q ss_pred cccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcC--CchHH-HHHHHHHHhh
Q 016374 233 NLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV--DSPAM-AVLCMACSQG 309 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~ 309 (390)
|..+++...+.+-.++++|.++.||++||..+.+.. ....+.+++....+...... .+..+ .+.+..+|+.
T Consensus 286 s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~------p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~ 359 (448)
T COG2271 286 SLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG------PMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFL 359 (448)
T ss_pred CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc------hHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998643322 22223333333333333222 22333 3334444444
Q ss_pred hccccccccchhccccCC-CcchhHHHHHHHHHHH-HHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhh
Q 016374 310 TDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVL-AGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS 383 (390)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~-g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
..+-. ...-....|+.| +..|++.|+...+.++ |.+.+....|++.|..||...|.+..+..+++.++.....
T Consensus 360 IyGPq-mLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~ 434 (448)
T COG2271 360 IYGPQ-MLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVW 434 (448)
T ss_pred HhhHH-HHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 44333 222333455555 6899999999999999 9999999999999999999999998888888877766553
No 3
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=9.9e-42 Score=314.20 Aligned_cols=382 Identities=15% Similarity=0.149 Sum_probs=280.9
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
+..+|++.+++|+|+++.|++.+.+.+++.+++++.|++.||+|||+++..+.++.+++.++.++++ |++.+++.|++
T Consensus 43 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l 120 (434)
T PRK11663 43 NAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSS--SLWAFALLWVL 120 (434)
T ss_pred HHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHh--HHHHHHHHHHH
Confidence 4568999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
.|++.+...+...+++.|++|+++|++++++.+.+.++|..+++.+.+.+.+.+|||+.|++.+++.++..+...+..+|
T Consensus 121 ~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~ 200 (434)
T PRK11663 121 NAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRD 200 (434)
T ss_pred HHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999988999999999999999999999999999999999999999999999999999999888777665555556666
Q ss_pred CCCCCCCCchhhhh-hhhh--cccCCCCCCcch-h-hhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccc
Q 016374 162 SPAEDPQLRPAEKK-LIVS--SCASKEPVKTIP-W-GLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTE 236 (390)
Q Consensus 162 ~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 236 (390)
+|++....+.++.+ +..+ +.+++++.+..+ + +..+|+|.++...+..++.......+..|+|.|+++.+|+++.+
T Consensus 201 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 280 (434)
T PRK11663 201 KPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVT 280 (434)
T ss_pred CHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHH
Confidence 65432111100000 0000 000000000111 1 23567888888888878777788888899999998878999999
Q ss_pred hhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhcccccc
Q 016374 237 SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQS 316 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (390)
++...+...++..+++++.|++.||+.+++.... ......+.......+......+..........++.+.......
T Consensus 281 a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 357 (434)
T PRK11663 281 ANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPM---NLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQML 357 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHH---HHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHH
Confidence 9999999999999999999999999943321110 0111112221111211122222222222222222221111111
Q ss_pred ccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhcCCCc
Q 016374 317 GLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKV 388 (390)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (390)
......+..++++++++.|+.++..++|++++|.+.|++.|+.||+..|+..+++.+++.+..+...|++++
T Consensus 358 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 429 (434)
T PRK11663 358 IGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQAP 429 (434)
T ss_pred HHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhhch
Confidence 112223444568999999999999999999999999999999999999999999988887766655444443
No 4
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=4.6e-41 Score=306.18 Aligned_cols=353 Identities=15% Similarity=0.176 Sum_probs=280.8
Q ss_pred ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Q 016374 3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFM 82 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 82 (390)
+.+|++.+|+|.|+++.|+..+.+.+++.+++++.|++.||+||||++..+..+.+++++.+++++ |++.++++|+++
T Consensus 30 ~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~~~ 107 (390)
T PRK03545 30 GLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAW--NFTVLLISRIGI 107 (390)
T ss_pred cchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHH
Confidence 457899999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred hhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCC
Q 016374 83 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 162 (390)
Q Consensus 83 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (390)
|++.+...+...+++.|++|+|+|++++++...+.++|..++|++++.+.+++|||+.|++.+++.++.........||+
T Consensus 108 G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 108 AFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99998888999999999999999999999999999999999999999999999999999999988877766655555554
Q ss_pred CCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhh
Q 016374 163 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV 242 (390)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 242 (390)
++++++ + ..+.++.+|+|.++......++..........+.+.++++..|.++.+.+.+..
T Consensus 188 ~~~~~~----~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~ 248 (390)
T PRK03545 188 PSEHSG----S---------------LKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLL 248 (390)
T ss_pred CCCCcc----h---------------HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHH
Confidence 322110 0 123456788998887766666666666666778888988878999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchhc
Q 016374 243 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNH 322 (390)
Q Consensus 243 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (390)
...++.++++++.+++.||+++|+ ....................+.........+.+.+....... .....
T Consensus 249 ~~~~~~~~g~~~~g~l~dr~~~~~--------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~-~~~~~ 319 (390)
T PRK03545 249 LFGGAGIIGSVLFSRLGNRHPSGF--------LLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLA-MQVKV 319 (390)
T ss_pred HHHHHHHHHHHHHHHHhhccchhH--------HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHH-HHHHH
Confidence 999999999999999999998762 111111111221111111222233333444445544333332 33334
Q ss_pred cccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhcC
Q 016374 323 QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTG 385 (390)
Q Consensus 323 ~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
.+..|+++++++|+.+...++|..+||.+.|.+.|+.|++..++..+.+.+++.+......++
T Consensus 320 ~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
T PRK03545 320 LKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFRR 382 (390)
T ss_pred HHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHccc
Confidence 455678899999999999999999999999999999999999999999998888777665443
No 5
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=5.8e-41 Score=306.62 Aligned_cols=377 Identities=26% Similarity=0.432 Sum_probs=293.6
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
+...|.+.+++|.|+.+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++..++++++ |++.++++|++
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 91 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG--AYVSLYILRVL 91 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc--CHHHHHHHHHH
Confidence 4567889999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
+|++.+...+....++.|++|+|+|++++++.+...++|..+++.+++.+.+..+||+.|++.+++.++..+......||
T Consensus 92 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (399)
T TIGR00893 92 LGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPD 171 (399)
T ss_pred HHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecC
Confidence 99999999999999999999999999999999999999999999999999999999999999888887776666666666
Q ss_pred CCCCCCCCchhhhhhhhhc------ccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCccc
Q 016374 162 SPAEDPQLRPAEKKLIVSS------CASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT 235 (390)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 235 (390)
++++++..++++++...++ .+++++.+..+.++.+|+|+++...+..++..........+.|.|+++.+|.++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (399)
T TIGR00893 172 PPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSIL 251 (399)
T ss_pred CCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHH
Confidence 6554332222222111111 1111122334567788999999999999999999999999999999998899999
Q ss_pred chhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccc
Q 016374 236 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQ 315 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (390)
+.+.......++.++++++.+++.||++||+...... .....................+..+........+.+.....+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (399)
T TIGR00893 252 EAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFA-RKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLGAGA 330 (399)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH-HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchhhhh
Confidence 9999999999999999999999999999986322211 011111111112222222222233333333333433333333
Q ss_pred cccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHHHHHHH
Q 016374 316 SGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDVFKVSVGLYLVGTAVWNL 381 (390)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 381 (390)
.......+..|+++|+++.|+.+...++|+.++|.+.|.+.|..| |+..+.+.+.+.+++.+..++
T Consensus 331 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 331 IGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred HHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 333444455666899999999999999999999999999999987 999999888888777666543
No 6
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=2.4e-41 Score=314.54 Aligned_cols=372 Identities=17% Similarity=0.148 Sum_probs=278.6
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhh-----hhhhhHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV-----AAKLGLPFLL 76 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~~~l~ 76 (390)
++..|++.+|+|+|+++.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++....++ ++ |++.++
T Consensus 49 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ 126 (467)
T PRK09556 49 KAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSV--SLGLMI 126 (467)
T ss_pred hhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccc--hHHHHH
Confidence 56789999999999999999999999999999999999999999999998888888777766654 57 899999
Q ss_pred HHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhc---CChHHHHHHHHHHHHHHH
Q 016374 77 VVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF---GWPSVFYSFGSLGTVWFT 153 (390)
Q Consensus 77 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---gw~~~f~~~~~~~~~~~~ 153 (390)
+.|+++|++.+...+...++++|++|+++|++++++...+.++|.++++.+..++.+.. +||..|.+.+++.++..+
T Consensus 127 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i 206 (467)
T PRK09556 127 ALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGF 206 (467)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988776653 699999988888877766
Q ss_pred HHHhhccCCCCCCCCCchhhhhhh--hhcc--cCCCCCCc-ch-hhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHh
Q 016374 154 VWLSKAHSSPAEDPQLRPAEKKLI--VSSC--ASKEPVKT-IP-WGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYN 227 (390)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 227 (390)
+.++..+++|++.+..++++.... .++. .++++... .. .++.+|+|.+|...+..++..........|.|.|++
T Consensus 207 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~ 286 (467)
T PRK09556 207 IGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAF 286 (467)
T ss_pred HHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666554322221110000 0000 00111111 11 223689999999999988888888889999999999
Q ss_pred HhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchH-HHHHHHHH
Q 016374 228 QVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA-MAVLCMAC 306 (390)
Q Consensus 228 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 306 (390)
+.+|+++.+++.......++.++++++.|+++||+++|+.... ..........+......++.. .....+..
T Consensus 287 ~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (467)
T PRK09556 287 QELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVA-------CIALALIIFTLGVYQHATSEYMYLASLFAL 359 (467)
T ss_pred HccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHH-------HHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 9899999999999998999999999999999999998854321 111111111111112223332 22333333
Q ss_pred HhhhccccccccchhccccCCCcchhHHHHHHHHHHH-HHHHHHHHHHHHHh------------cCCchhHHHHHHHHHH
Q 016374 307 SQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVL-AGVFGTAATGYILQ------------HGSWDDVFKVSVGLYL 373 (390)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~ig~~i~g~l~~------------~~g~~~~~~~~~~~~~ 373 (390)
+...............+..|++++|++.|+.+...++ |..++|.+.|.+.| ..+|+..|++..++.+
T Consensus 360 G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~ 439 (467)
T PRK09556 360 GFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAI 439 (467)
T ss_pred HHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHH
Confidence 4322221111112333555668999999999999997 77999999999999 5779999999988888
Q ss_pred HHHHHHHHh
Q 016374 374 VGTAVWNLF 382 (390)
Q Consensus 374 ~~~~~~~~~ 382 (390)
++.+..+..
T Consensus 440 ~~~~~~~~~ 448 (467)
T PRK09556 440 GCICLMAIV 448 (467)
T ss_pred HHHHHHHHH
Confidence 887766544
No 7
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-40 Score=300.51 Aligned_cols=375 Identities=39% Similarity=0.773 Sum_probs=331.5
Q ss_pred ccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhcccc
Q 016374 9 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 88 (390)
Q Consensus 9 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 88 (390)
..++++|++|.+++.+.+..|+.+++.+.|++.||+|.|+++..+.++.++++++..++.+.+++.+++.|++||++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 56899999999999999999999999999999999999999999999999999999998865677889999999999999
Q ss_pred chhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhh-cCChHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 016374 89 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDP 167 (390)
Q Consensus 89 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (390)
.+|+...+.++|.|++||++..++...+..+|.+++.+++|++.+. +||+++|++.++++++..++++.+..|+|.+++
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~ 224 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP 224 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 9999999999999999999999999999999999999999999998 999999999999999999999999999999988
Q ss_pred CCchhhhhhhhhcccCCCCC--CcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhH
Q 016374 168 QLRPAEKKLIVSSCASKEPV--KTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPW 245 (390)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 245 (390)
...++|++.+++++.+++.. .+.|++++++++.+|...+..+..++..+.+..+.|.|+++++|++..+.|++.++..
T Consensus 225 ~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~ 304 (466)
T KOG2532|consen 225 NISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPF 304 (466)
T ss_pred CCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHH
Confidence 88888888877765554444 4789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCC--chHHHHHHHHHHhhhccccccccchhcc
Q 016374 246 LTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD--SPAMAVLCMACSQGTDAFSQSGLYSNHQ 323 (390)
Q Consensus 246 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (390)
+...+..++.|.++||..+|..-....++..-.++..+.+..+......+ ..+..+.++.+..+..+...+....-..
T Consensus 305 l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~ 384 (466)
T KOG2532|consen 305 LAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQ 384 (466)
T ss_pred HHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhh
Confidence 99999999999999999887444444566777777777777766655443 3444555555666666666666666666
Q ss_pred ccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc---CCchhHHHHHHHHHHHHHHHHHHhh
Q 016374 324 DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH---GSWDDVFKVSVGLYLVGTAVWNLFS 383 (390)
Q Consensus 324 ~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
+..|++.+..+|+.+....+.+.++|.+.|.+.+. ..|+..|++.+++.+++.+.+.++-
T Consensus 385 ~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 385 DIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEee
Confidence 66889999999999999999999999999999843 4799999999999999987776663
No 8
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=8.6e-40 Score=292.90 Aligned_cols=351 Identities=13% Similarity=0.072 Sum_probs=256.6
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
++.+|++++|+|+|+++.|++.+.+.+++.+++++.|+++||+|||+++..+......+.......+ |++.++++|++
T Consensus 11 ~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~R~l 88 (368)
T TIGR00903 11 SPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPF--NYEWLLACQLL 88 (368)
T ss_pred HhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHH
Confidence 5788999999999999999999999999999999999999999999987666555545443333336 89999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
+|++.+. .+.....++|++|+|+|++++++.+.+..+|..+++++++.+.+++|||+.|++.++++++..++.++..||
T Consensus 89 ~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~ 167 (368)
T TIGR00903 89 AALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPA 167 (368)
T ss_pred HHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999985 556666779999999999999999999999999999999999999999999999899888887777888888
Q ss_pred CCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhh
Q 016374 162 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 241 (390)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 241 (390)
+|+++++..+.+ +...++++++|+|.+|...+..++.....+.+.+|+|.|+++ .|++.. .+...
T Consensus 168 ~p~~~~~~~~~~-------------~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~ 232 (368)
T TIGR00903 168 LPFQAAEGFGFK-------------DAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAV 232 (368)
T ss_pred CCCCCCCCcchH-------------HHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHH
Confidence 765432211000 001246788999999999999999999999999999999987 578764 55555
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchh
Q 016374 242 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 321 (390)
Q Consensus 242 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (390)
....+.+.++ .+++.||..||+.... ... ......+..........+.........+..+......+....+
T Consensus 233 ~l~~~~g~~g---~~~~~d~~~r~~~r~~----~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 304 (368)
T TIGR00903 233 ALAILAGLIG---VAVIPDRVARAGLRSI----YIR-AAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDW 304 (368)
T ss_pred HHHHHHHHHH---HHHhhHHhhhhhhHHH----HHH-HHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 5555555544 4778888765532111 111 0111111111111222222222222222222222222334444
Q ss_pred c-cccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Q 016374 322 H-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN 380 (390)
Q Consensus 322 ~-~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 380 (390)
. +..|++.|+++.|+.+...++++.++|.+.+.+.. +.+..|.+.+...+++.+...
T Consensus 305 ~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 305 IGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 4 44455799999999999999999999999998874 777888888888888777654
No 9
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=3e-40 Score=301.96 Aligned_cols=360 Identities=18% Similarity=0.259 Sum_probs=268.6
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
++..|.+++|+|+|+++.|++.+++.+++.+++++.|++.||+|||+++..+.++.+++.+++++++ |++.+++.|++
T Consensus 28 ~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l 105 (412)
T TIGR02332 28 GFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFAT--GPESLYLLRIL 105 (412)
T ss_pred HHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHH
Confidence 4567889999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhh------hcCChHHHHHHHHHHHHHHHHH
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH------RFGWPSVFYSFGSLGTVWFTVW 155 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~------~~gw~~~f~~~~~~~~~~~~~~ 155 (390)
+|++.+...+....++.|++|+|+|++++++++.+.++|..+++.+++++.+ ..|||+.|++.+++.++..++.
T Consensus 106 ~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~ 185 (412)
T TIGR02332 106 VGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMT 185 (412)
T ss_pred HHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998864 3699999999988888777777
Q ss_pred HhhccCCCCCCCCCchhhhhhhhh----cc---c-CCCC--CC----cchhhhhhcCchhHHHHHHHHHHHHHHHHHhhc
Q 016374 156 LSKAHSSPAEDPQLRPAEKKLIVS----SC---A-SKEP--VK----TIPWGLILSKPPVWALIVSHFCHNWGTFILLTW 221 (390)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~----~~---~-~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (390)
+++.||+|++.+...+++++...+ +. + +++. .+ +..++++ ++|.++...+..++....++.+.+|
T Consensus 186 ~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (412)
T TIGR02332 186 WFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREI-FTPAIMLYTLAYFCLTNTLSAINIW 264 (412)
T ss_pred hhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHh-cChHHHHHHHHHHHHHHHHHHHHHH
Confidence 777788776432111211111100 00 0 0000 00 1123333 4678888888888888889999999
Q ss_pred hHHHHhHh-cCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHH
Q 016374 222 MPTYYNQV-LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA 300 (390)
Q Consensus 222 ~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (390)
+|.++++. .|.++.+++.......++.++++++.|+++||+++|+... ............+ .....+.....
T Consensus 265 ~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~ 337 (412)
T TIGR02332 265 TPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHT------ALPYLFAAAGWLL-ASATDHNLIQL 337 (412)
T ss_pred HHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHH------HHHHHHHHHHHHH-HHhcCCHHHHH
Confidence 99999883 4678888899999999999999999999999998774211 1111111111111 11122222111
Q ss_pred HHHHHHHhhhccccccccchhc-cccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CchhHHHHHHHHH
Q 016374 301 VLCMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG-SWDDVFKVSVGLY 372 (390)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~-g~~~~~~~~~~~~ 372 (390)
....+...+... ..+...... +..++|+|+++.|+.+...++|++++|.+.|.+.|.. +|+..+++.+++.
T Consensus 338 ~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 338 LGIIMASMGSFS-AMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HHHHHHHHHhhh-hhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 111222222111 112222222 3356689999999999999999999999999999985 5999888776654
No 10
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=8.2e-40 Score=297.56 Aligned_cols=354 Identities=14% Similarity=0.157 Sum_probs=271.3
Q ss_pred CcccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Q 016374 1 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 80 (390)
Q Consensus 1 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 80 (390)
+++.+|++++|+|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+..+++++.+.+++++ |++.++++|+
T Consensus 28 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~--~~~~ll~~r~ 105 (393)
T PRK09705 28 VGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYP--QSALLLSSAL 105 (393)
T ss_pred cchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCc--chHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhc-CChHHHHHHHHHHHHHHHHHHhhc
Q 016374 81 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWFTVWLSKA 159 (390)
Q Consensus 81 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~ 159 (390)
++|++.+...+....++.|++| ++|+++++.+..+...|..+++.+++++.++. +||+.+.+.++..++.....+...
T Consensus 106 l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 184 (393)
T PRK09705 106 LGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQS 184 (393)
T ss_pred HHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999996 88999999999999999999999999998875 899998776666554433333222
Q ss_pred cCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhh
Q 016374 160 HSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGL 239 (390)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 239 (390)
+++|+++++ + + .+.++.+|+|+.+...+..++....+.....+.|.|+++ +|.++.+++.
T Consensus 185 ~~~~~~~~~----~-----------~----~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~ 244 (393)
T PRK09705 185 AREVASSHK----T-----------T----TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGS 244 (393)
T ss_pred cCCCccccC----C-----------C----cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhH
Confidence 222211100 0 0 011235677888877777777778888899999999998 7999999999
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccc
Q 016374 240 FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLY 319 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (390)
..+...++.+++++..+++.||.++|+.... ...+...+.........+... ....+.+.+.+...+....
T Consensus 245 ~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~-------~~~l~~~~~~~~~~~~~~~~~--~~~~l~g~g~g~~~~~~~~ 315 (393)
T PRK09705 245 LLALMTLGQAAGALLMPAMARHQDRRKLLML-------ALVLQLVGFCGFIWLPLQLPV--LWAMVCGLGLGGAFPLCLL 315 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccchHHHHH-------HHHHHHHHHHHHHHccchHHH--HHHHHHHHhccchHHHHHH
Confidence 9999999999999999999999998843222 211111111111111111122 2223334444444333333
Q ss_pred hhccccCC-CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CchhHHHHHHHHHHHHHHHHHHhhcCC
Q 016374 320 SNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHG-SWDDVFKVSVGLYLVGTAVWNLFSTGE 386 (390)
Q Consensus 320 ~~~~~~~~-~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (390)
...+..+| +++++..|+.+...++++.++|.+.|++.|+. +|...|.+..++.++..++...+.+++
T Consensus 316 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 316 LALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred HHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 34455544 68999999999999999999999999999985 488888888887777776666654443
No 11
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=1.3e-39 Score=303.41 Aligned_cols=373 Identities=31% Similarity=0.552 Sum_probs=288.0
Q ss_pred ccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccch
Q 016374 11 EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAM 90 (390)
Q Consensus 11 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 90 (390)
|+++++.+.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+++.++...+++.+++.|+++|++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 89999999999999999999999999999999999999999999999999888765532267889999999999999999
Q ss_pred hhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhc-CChHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 016374 91 PAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQL 169 (390)
Q Consensus 91 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (390)
+....++.|++|+++|++++++...+..+|..+++++++.+.+.. |||+.|++.++++++..++++...+|+|+++++.
T Consensus 150 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~ 229 (465)
T TIGR00894 150 PATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCI 229 (465)
T ss_pred hhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCC
Confidence 999999999999999999999999999999999999999999884 9999999999988887777777777777654443
Q ss_pred chhhhhhhhhcccCC--CCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHH
Q 016374 170 RPAEKKLIVSSCASK--EPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLT 247 (390)
Q Consensus 170 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 247 (390)
++++++...+..+++ +..++.++++++++|.+|...+..+......+.+.+|+|.|+++.+|.+..+.++..+...++
T Consensus 230 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~ 309 (465)
T TIGR00894 230 SKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLF 309 (465)
T ss_pred CHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHH
Confidence 333333222211111 112244688899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCchhHHH-HHHHHHHHHHHHHHHHHHhc-CCchHHHHHHHHHHhhhccccccccchhcccc
Q 016374 248 MAFSANLGGWIADTLVSKGLSVTTVR-KIMQSIGFLGPAFFLTQLSH-VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDI 325 (390)
Q Consensus 248 ~~~~~~~~g~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (390)
..++.++.|+++||.++|+....... .................... .......+....++.+......+.......+.
T Consensus 310 ~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 389 (465)
T TIGR00894 310 AWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDL 389 (465)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhc
Confidence 99999999999999987765432211 12222222222222211221 22333333333333333333333344455567
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc---CCchhHHHHHHHHHHHHHHHHHHhh
Q 016374 326 APRYSGVLLGLSNTAGVLAGVFGTAATGYILQH---GSWDDVFKVSVGLYLVGTAVWNLFS 383 (390)
Q Consensus 326 ~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
.|+.+|.+.|+.+....+++.++|.+.|.+.|. .+|...|.+.++..+++.++.....
T Consensus 390 ~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 390 APRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 778999999999999999999999999998875 3478888888888888877665543
No 12
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=1.2e-38 Score=289.23 Aligned_cols=356 Identities=16% Similarity=0.183 Sum_probs=266.9
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
++.+|.+++|+|.|+++.|+..+.+.+++.+++++.|+++||+|||+++..+..+.+++.+++++++ |++.+++.|++
T Consensus 23 ~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~--~~~~l~~~r~l 100 (382)
T PRK10091 23 MGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSS--SYLMLAIGRLV 100 (382)
T ss_pred HhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhC--cHHHHHHHHHH
Confidence 3578899999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
+|++.+...+....++.|++|+++|+++++....+..+|..++|++++.+.+..|||+.|++.+++.++..+..+...||
T Consensus 101 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~ 180 (382)
T PRK10091 101 SGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPD 180 (382)
T ss_pred HHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999988888889999999999999999999999999999999999999999999999999988877766655666666
Q ss_pred CCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhh
Q 016374 162 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 241 (390)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 241 (390)
.+++++. + . +.. .+.+|+++.+......++..........+.+.++++.+|.++.+.+.+.
T Consensus 181 ~~~~~~~-~--~---------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~ 241 (382)
T PRK10091 181 IRDEAKG-G--L---------------REQ-FHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIM 241 (382)
T ss_pred CCccccc-C--H---------------HHH-HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 4322110 0 0 011 2356777777666555555555556667778888887899999999999
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchh
Q 016374 242 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 321 (390)
Q Consensus 242 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (390)
....++.++++++.+++.||+++|+.... ...................+.......+.+.+......+.....
T Consensus 242 ~~~~~~~~ig~~~~g~l~~r~~~~~~~~~-------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 314 (382)
T PRK10091 242 MLVGLGMVLGNLLSGRLSGRYSPLRIAAV-------TDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILL 314 (382)
T ss_pred HHHHHHHHHHhHHHheeccccCchhHHHH-------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 99999999999999999999998854221 11111111111111112222223333333333333333322223
Q ss_pred ccccC-CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCchhHHHHHHHHHHHHHHHHHHhhcCCC
Q 016374 322 HQDIA-PRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFSTGEK 387 (390)
Q Consensus 322 ~~~~~-~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (390)
.++.+ ++.++.+ ..+...++|+.+||.+.|.+.|. .+|+..+...++.+++.........++|+
T Consensus 315 ~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (382)
T PRK10091 315 LQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKR 380 (382)
T ss_pred HHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 33333 3445544 34677899999999999999996 78999999888777777666555544433
No 13
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=1.1e-38 Score=289.51 Aligned_cols=352 Identities=17% Similarity=0.182 Sum_probs=270.3
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
++..|.+.+|+|+|+++.+++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+.+++++ |++.++++|++
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 100 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIAD--SLAALYLTYGL 100 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
+|++.+...+.....+.|++| |+|+++.++...+.++|..+++++.+.+.+..|||+.|++.+++.++..+..++..++
T Consensus 101 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 179 (377)
T TIGR00890 101 ASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGY 179 (377)
T ss_pred HhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheec
Confidence 999999888888888999985 7899999999999999998888788888888899999999998888877666666555
Q ss_pred CCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhh
Q 016374 162 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 241 (390)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 241 (390)
+++++++++++ .+.++.+.++.+|+|+++...+..+...........+.+.|.++ +|.++.+.+...
T Consensus 180 ~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 246 (377)
T TIGR00890 180 PPGQLIKTNIE------------VSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAV 246 (377)
T ss_pred CchhccccCcc------------cchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHH
Confidence 43321111000 00112244567889988887777776666666666777778766 688888889999
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchH-HHHHHHHHHhhhccccccccch
Q 016374 242 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA-MAVLCMACSQGTDAFSQSGLYS 320 (390)
Q Consensus 242 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 320 (390)
....++.+++++..+++.||++||+.... ..................... ......+.+.+.+.........
T Consensus 247 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~ 319 (377)
T TIGR00890 247 SISSIFNGGGRPFLGALSDKIGRQKTMSI-------VFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSL 319 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhH-------HHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHH
Confidence 99999999999999999999999854322 111111111111111211222 2222333344433333222333
Q ss_pred hccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Q 016374 321 NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT 376 (390)
Q Consensus 321 ~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~ 376 (390)
..+..++++|+++.|+.+....+|+.++|.+.|.+.|+.||+..|.+.+++.+++.
T Consensus 320 ~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 320 VSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 44556678999999999999999999999999999999999999998887777654
No 14
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=4.7e-38 Score=291.31 Aligned_cols=375 Identities=15% Similarity=0.192 Sum_probs=266.6
Q ss_pred ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh--hhHHHHHHHHH
Q 016374 3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK--LGLPFLLVVRV 80 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~ 80 (390)
+.+|.+.++ |.|+++.++..+.+.+++.+++++.|+++||+|||++++.+.++.+++.+.+++++. .+++.+++.|+
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 128 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLF 128 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHH
Confidence 467888888 999999999999999999999999999999999999999999999999988877531 16778899999
Q ss_pred HHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhH-hHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhc
Q 016374 81 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSV-TGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 159 (390)
Q Consensus 81 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 159 (390)
+.|++.+...+.....+.|++|+|+|++++++.+.+.++|.. .+|.++..+....|||+.|++.+++.++..++..++.
T Consensus 129 l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~ 208 (452)
T PRK11273 129 LCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMM 208 (452)
T ss_pred HHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999988888888999999999999999999999999874 4555444444445999999998888777766666677
Q ss_pred cCCCCCCCCCchhhh-hhhhhc--ccCCCCCC-cch-hhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcc
Q 016374 160 HSSPAEDPQLRPAEK-KLIVSS--CASKEPVK-TIP-WGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNL 234 (390)
Q Consensus 160 ~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 234 (390)
||+|++....++++. ++..++ .+++++.+ +.. .+.++|+|.+|...+..++.+...+....++|.|+++..|++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~ 288 (452)
T PRK11273 209 RDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFAL 288 (452)
T ss_pred cCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 776654221111111 000000 00000000 111 2336788999998888888888888889999999999889998
Q ss_pred cchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchH-HHHHHHHHHhhhccc
Q 016374 235 TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA-MAVLCMACSQGTDAF 313 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 313 (390)
.+++.......++.++++++.|+++||+++++.... .....................+.. .......++......
T Consensus 289 ~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 364 (452)
T PRK11273 289 DKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGAT----GVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGP 364 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchH----HHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhH
Confidence 899988888889999999999999999954322111 111111111111111121222222 222223333322211
Q ss_pred cccccchhccccCCCcchhHHHHHHHHHHHHHHH-HHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh
Q 016374 314 SQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVF-GTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i-g~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
.........+..|++.+|+++|+.+...++|+.+ +|.+.|.+.|+.||+..|++.+++++++.+....+
T Consensus 365 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 365 VMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred HHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 1111122345666789999999999999998765 79999999999999999998888888777665544
No 15
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=2.5e-38 Score=295.98 Aligned_cols=344 Identities=15% Similarity=0.127 Sum_probs=272.4
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
++++|++.+|+|.+.++.+|+.+.|.++...+.++.|+++||+|||+++..+..+.+++.+++++++ |++.++++|++
T Consensus 26 ~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~--~~~~li~~r~l 103 (495)
T PRK14995 26 HVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSP--TASWLIATRAL 103 (495)
T ss_pred HHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHH
Confidence 5678999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HhhccccchhhhhHHhhhcc-cCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhcc
Q 016374 82 MGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 160 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 160 (390)
+|++.+...+.....+.+.+ |+++|++++++......+|..+||.+++.+.++.|||+.|++...+.++..++..+..|
T Consensus 104 ~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~ 183 (495)
T PRK14995 104 LAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVP 183 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999988888888887765 67899999999999999999999999999999999999999998888877777777777
Q ss_pred CCCCCCCCCchhhhhh------------h----------------------------hhcccCCCCCCcchhhhhhcCch
Q 016374 161 SSPAEDPQLRPAEKKL------------I----------------------------VSSCASKEPVKTIPWGLILSKPP 200 (390)
Q Consensus 161 ~~~~~~~~~~~~~~~~------------~----------------------------~~~~~~~~~~~~~~~~~~~~~~~ 200 (390)
++++++++..+..... . ..+.+.++| ..+ .+++|+|.
T Consensus 184 ~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p--~~~-~~lf~~~~ 260 (495)
T PRK14995 184 RQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRP--MID-MRLFTHRI 260 (495)
T ss_pred CCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC--CcC-HHHhCCcc
Confidence 7554322211100000 0 001111111 122 35788999
Q ss_pred hHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 016374 201 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG 280 (390)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 280 (390)
+....+..++......+...+.|.|+++.+|.++.+++....+..++..++.++.|++.||+++|+.... ...
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~-------g~~ 333 (495)
T PRK14995 261 ILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATG-------GMA 333 (495)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHH-------HHH
Confidence 9888888888888888888999999999999999999999999999999999999999999998743221 111
Q ss_pred HHHHHHHHH-HHhcCCch-HHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016374 281 FLGPAFFLT-QLSHVDSP-AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 357 (390)
Q Consensus 281 ~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~ 357 (390)
....+.... .....++. .......+.+.+.+....+......+..++++++.+.++.++.+++|+.+|+.+.|.+.+
T Consensus 334 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 334 LSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111 12222222 334455556777666665666666677788999999999999999999999999999865
No 16
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=1.7e-37 Score=282.15 Aligned_cols=343 Identities=16% Similarity=0.182 Sum_probs=261.8
Q ss_pred cccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHh
Q 016374 4 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMG 83 (390)
Q Consensus 4 ~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 83 (390)
.+|++.+|+|+|+++.++..+.+.++..+++++.|+++||+|||+++..+.++.+++.+++++++ |++.+++.|+++|
T Consensus 42 ~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G 119 (394)
T PRK10213 42 LLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFAN--SFSLLLIGRACLG 119 (394)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHC--hHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred hccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCCC
Q 016374 84 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 163 (390)
Q Consensus 84 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (390)
++.+...+...+++.|++|+|+|++++++...+.++|..++|++++.+.+++|||+.|++.+++.++..+......||++
T Consensus 120 ~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 120 LALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999988777765544444455543
Q ss_pred CCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhH
Q 016374 164 AEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVL 243 (390)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 243 (390)
+++++ ...+.++.+|+|.++...+..++..........+.+.++.+++|+++.+.+.....
T Consensus 200 ~~~~~-------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~ 260 (394)
T PRK10213 200 GEPSH-------------------QKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLS 260 (394)
T ss_pred ccccc-------------------chhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHH
Confidence 21110 01123457889998887766666666666666676444444579999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchhcc
Q 016374 244 PWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQ 323 (390)
Q Consensus 244 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (390)
.+++.++++.+.+++.||.+++ . ..............+... ..+.+.......+.+.+.............+
T Consensus 261 ~~~~~iig~~~~~~l~~r~~~~-~------l~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 332 (394)
T PRK10213 261 FGIASFVGTSLSSFILKRSVKL-A------LAGAPLVLAVSALVLTLW-GSDKIVATGVAIIWGLTFALVPVGWSTWITR 332 (394)
T ss_pred HHHHHHHHHHHHHHHHhccchh-H------HHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 9999999999999999995433 1 111111111111122111 2222333344444555554443333334444
Q ss_pred ccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Q 016374 324 DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT 376 (390)
Q Consensus 324 ~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~ 376 (390)
.. |+++++..+......++|..+||.+.|.+.|+.|+...+...+...++..
T Consensus 333 ~~-~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 333 SL-ADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HC-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHH
Confidence 44 56677888888888899999999999999999999888888776555443
No 17
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=4.6e-38 Score=288.36 Aligned_cols=359 Identities=21% Similarity=0.239 Sum_probs=268.7
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
++..|.+.+|+|.|+++.+++.+.+.++..++.++.|+++||+|||+++..+.++..++.+++.+++ |++.+++.|++
T Consensus 35 ~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 112 (406)
T PRK11551 35 GVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAW--DFPSLLVARLL 112 (406)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
+|++.+...+...+++.|++|+|+|++++++.+.+..+|..+++.+++.+.+..+||+.|++.+++.++..+......||
T Consensus 113 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (406)
T PRK11551 113 TGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPE 192 (406)
T ss_pred HHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999998888999999999887766666566666677
Q ss_pred CCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhc---CchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchh
Q 016374 162 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILS---KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESG 238 (390)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 238 (390)
++++.++.++++++ +...+..++ ++..+......+......+....+.|.++++ .|.++.+.+
T Consensus 193 ~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~ 258 (406)
T PRK11551 193 SRAFAQAAGAGKQR-------------APVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAG 258 (406)
T ss_pred ChhHHhccCcchhh-------------hhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhh
Confidence 65432211100000 001111222 2233344444455555666778889999988 699999999
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCch-HHHHHHHHHHhhhccccccc
Q 016374 239 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP-AMAVLCMACSQGTDAFSQSG 317 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 317 (390)
.......++.++++++.|++.||+++|+.. .. +.......+......++. .......+.+.+........
T Consensus 259 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 329 (406)
T PRK11551 259 LVQIAFNIGGALGSLLIGALMDRLRPRRVV-------LL--IYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVL 329 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-------HH--HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHH
Confidence 999999999999999999999999988432 11 111111121222222232 33333334444433333333
Q ss_pred cchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCchhHHHHHHHHHHHHHHHHHHhhcC
Q 016374 318 LYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFSTG 385 (390)
Q Consensus 318 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
.....+..|+++|+++.|+.+....+|..++|.+.|.+.|+ .++...++....+.+++.++.+...++
T Consensus 330 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (406)
T PRK11551 330 YALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLVSR 398 (406)
T ss_pred HHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33445566778999999999999999999999999999997 456666766666666666655555443
No 18
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=6.8e-38 Score=285.50 Aligned_cols=351 Identities=15% Similarity=0.184 Sum_probs=266.8
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
++.+|++.+|+|+|+++.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+++.+++++++ |++.+++.|++
T Consensus 27 g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~--~~~~~~~~~~l 104 (394)
T PRK03699 27 GMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSH--SLALFSIAMFV 104 (394)
T ss_pred hhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcc--hHHHHHHHHHH
Confidence 5678999999999999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhh-hcCChHHHHHHHHHHHHHHHHHHhhcc
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGWPSVFYSFGSLGTVWFTVWLSKAH 160 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~gw~~~f~~~~~~~~~~~~~~~~~~~ 160 (390)
+|++.+...+...+++.|++|+++|+++++..+....+|..++|.+.+.+.+ ..|||+.|.+.+++.++..++.+. +
T Consensus 105 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~--~ 182 (394)
T PRK03699 105 LGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF--S 182 (394)
T ss_pred HHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh--c
Confidence 9999998888899999999999999999999999999999999999888764 579999999888877766544332 2
Q ss_pred CCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhh
Q 016374 161 SSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLF 240 (390)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 240 (390)
+.|+.+++.+++ +++..+ ...++.++...+..++....++.+..|.|.|+++.+|+|+.+.+.+
T Consensus 183 ~~p~~~~~~~~~-----------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~ 246 (394)
T PRK03699 183 EFPALGKHAPKA-----------DKPVAK-----EKWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNL 246 (394)
T ss_pred CCccccccCccc-----------cCcccc-----ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHH
Confidence 222211111000 000001 1124566767777777777788889999999998889999999999
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccch
Q 016374 241 CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYS 320 (390)
Q Consensus 241 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (390)
.+...++..+++++.+++.||+++|+.... ............. ...+..+........+.+.+... +....
T Consensus 247 ~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~G~~~~~~~-~~~~~ 317 (394)
T PRK03699 247 VSNFWMAYMVGMWIFSFIVRFFDLQRILTV-------LAGLALVLMYLFV-NTDDPSHLLYAILGLGFFSSAIY-TTIIT 317 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhHHHH-------HHHHHHHHHHHHH-HcCCchHHHHHHHHHHHHHHHHH-HHHHH
Confidence 999999999999999999999999854221 1111111111111 12233333334444444433332 33333
Q ss_pred hccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH
Q 016374 321 NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 381 (390)
Q Consensus 321 ~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 381 (390)
...+..|++++...|......++|..++|.+.|++.|..|++..++..+++++++.+....
T Consensus 318 ~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (394)
T PRK03699 318 LGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCIL 378 (394)
T ss_pred HHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHH
Confidence 4444556667788899999999999999999999999999999998888887777654443
No 19
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=7.3e-37 Score=280.16 Aligned_cols=357 Identities=14% Similarity=0.105 Sum_probs=269.6
Q ss_pred ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Q 016374 3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFM 82 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 82 (390)
+.+|++.+|+|.|+.+.++..+.+.+++.++.++.|+++||+||||++..+..+.+++.+.+.+++ +++.+++.|+++
T Consensus 34 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~ 111 (406)
T PRK15402 34 PGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQ--SIEQFTLLRFLQ 111 (406)
T ss_pred cchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHHH
Confidence 567889999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred hhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCC
Q 016374 83 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 162 (390)
Q Consensus 83 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (390)
|++.+...+...+++.|++|+++|.+.+++......+|..++|.+++.+.++.+||+.|++.+++.++..+..+...||+
T Consensus 112 G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (406)
T PRK15402 112 GIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPET 191 (406)
T ss_pred HhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99998888889999999999999999999999988999999999999999999999999998888877766555556665
Q ss_pred CCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhh
Q 016374 163 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV 242 (390)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 242 (390)
+++++++.+.+ +...++++++|+|+++...+..++..........+.|.++++.+|.++.+.+....
T Consensus 192 ~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~ 258 (406)
T PRK15402 192 AGRVGEKLSLK-------------ELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQV 258 (406)
T ss_pred CccccccccHH-------------HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHH
Confidence 43221110000 01234567889999988877777776666677778899988888999999888888
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHH---hcCCc-hHHHHHHHHHHhhhcccccccc
Q 016374 243 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL---SHVDS-PAMAVLCMACSQGTDAFSQSGL 318 (390)
Q Consensus 243 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 318 (390)
...++.++++++.+++.||+++|+.... .......+...... ..... .+......+.+.+.+... +..
T Consensus 259 ~~~~~~~~g~~~~g~l~~r~~~~~~~~~-------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~-~~~ 330 (406)
T PRK15402 259 PVFGALIAGNLTLARLTSRRPLRSLIRM-------GLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLAN-AGL 330 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHH-------HHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHh-hhH
Confidence 7888899999999999999998843222 11111111111111 11222 233334444555544433 232
Q ss_pred chhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh
Q 016374 319 YSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 319 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
.......+++++|++.+..+..+.++..+|+.+.+.+.+..+.....+...+..++........
T Consensus 331 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK15402 331 YRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRIF 394 (406)
T ss_pred HHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344568999999999999999999999999999998765544444444444443333333
No 20
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=1.3e-38 Score=289.39 Aligned_cols=358 Identities=16% Similarity=0.194 Sum_probs=269.9
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
++..|.+.+++|.|+.+.+++.+++.++..++.++.|+++||+|||+.+..+.++.+++.++.++++ +++.+++.|++
T Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 92 (379)
T TIGR00881 15 ALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST--SLWVMAALWAL 92 (379)
T ss_pred hhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh--hHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHH-hhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhcc
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL-AFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 160 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 160 (390)
.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++ .++..+.+..+||+.|++.+++.++..++.+...|
T Consensus 93 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T TIGR00881 93 NGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLR 172 (379)
T ss_pred HHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeC
Confidence 99999999999999999999999999999999999999999999 57777778889999999988887776666666666
Q ss_pred CCCCCCCCCchhhhhhhh-hc----ccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCccc
Q 016374 161 SSPAEDPQLRPAEKKLIV-SS----CASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT 235 (390)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 235 (390)
|++++++..++++.+..+ ++ .+++....+...++++|+|.++...+..+...........+.|.|+++.+|.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 252 (379)
T TIGR00881 173 DSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKE 252 (379)
T ss_pred CCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 655432211111110000 00 0011111223456678899999888888888888889999999999998899999
Q ss_pred chhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCch-HHHHHHHHHHhhhcccc
Q 016374 236 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP-AMAVLCMACSQGTDAFS 314 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 314 (390)
+.+.......++.++++++.+++.||..+++.... .....................+. .........+.......
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 328 (379)
T TIGR00881 253 KASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPL----AVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQ 328 (379)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHH----HHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999998755432221 11111111111111111111222 22233333333322222
Q ss_pred ccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHH
Q 016374 315 QSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVF 365 (390)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~ 365 (390)
........+..|+++|+++.|+.+....+|+.++|.+.|.+.|+.||+..|
T Consensus 329 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 329 MLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 222233445566789999999999999999999999999999998887643
No 21
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=1.7e-37 Score=286.52 Aligned_cols=379 Identities=15% Similarity=0.209 Sum_probs=271.5
Q ss_pred cccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh--hhHHHHHHHHHH
Q 016374 4 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK--LGLPFLLVVRVF 81 (390)
Q Consensus 4 ~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l 81 (390)
..|.+++ +|.|+++.+++.+++.++..++.++.|+++||+|||+.+..+.++.+++.++.++.+. .+++.+.+.|++
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 127 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFL 127 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHH
Confidence 4566665 5999999999999999999999999999999999999999999999999888766421 167788899999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhh-hcCChHHHHHHHHHHHHHHHHHHhhcc
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGWPSVFYSFGSLGTVWFTVWLSKAH 160 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~gw~~~f~~~~~~~~~~~~~~~~~~~ 160 (390)
.|++.+...+.....+.|++|+++|++++++.+.+.++|..+++.+.+...+ +.+||+.|++.+++.++..+..++..|
T Consensus 128 ~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~ 207 (438)
T TIGR00712 128 NGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMR 207 (438)
T ss_pred HHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999998889899999999999999999999999999999999888776444 579999999999888887666666677
Q ss_pred CCCCCCCCCchhh-hhhh-hhc-ccCCCCC-Ccc-hhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCccc
Q 016374 161 SSPAEDPQLRPAE-KKLI-VSS-CASKEPV-KTI-PWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT 235 (390)
Q Consensus 161 ~~~~~~~~~~~~~-~~~~-~~~-~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 235 (390)
|+|++.+..+.++ +.+. .+. .+++++. .+. ..+.++|++.++...+..++.....+....+.|.|+++..|.++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 287 (438)
T TIGR00712 208 DTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALD 287 (438)
T ss_pred CCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChh
Confidence 7654321111100 0000 000 0001110 011 123467899999888887777777888889999999998899999
Q ss_pred chhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHH-HHHHHHHHhhhcccc
Q 016374 236 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM-AVLCMACSQGTDAFS 314 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 314 (390)
+++.......+.+++++++.|++.||+++++....+ ... .................+.+. .......+.+.....
T Consensus 288 ~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 363 (438)
T TIGR00712 288 KSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATG---VFF-MTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPV 363 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHH---HHH-HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHH
Confidence 999999999999999999999999999765432211 111 111111111111111222222 222222222211111
Q ss_pred ccccchhccccCCCcchhHHHHHHHHHHHHH-HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhcCCC
Q 016374 315 QSGLYSNHQDIAPRYSGVLLGLSNTAGVLAG-VFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK 387 (390)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~-~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (390)
........+..++++|+++.|+.+...+.++ .++|.+.|.+.|+.||+..+++..+..+++.+..+.+.+++|
T Consensus 364 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 364 MLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 1111123355566899999999999988875 689999999999999999999888888888877777766655
No 22
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=4.3e-37 Score=283.41 Aligned_cols=363 Identities=15% Similarity=0.110 Sum_probs=248.9
Q ss_pred cccccccccccC---cCcchHHHHHH---HHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHH--
Q 016374 2 SIAILPMSAEFN---WNPATVGLIQS---SFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLP-- 73 (390)
Q Consensus 2 ~~~lp~i~~~~~---~s~~~~g~~~s---~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~-- 73 (390)
++..|.+.+|++ .++.+.+...+ ...++..++++++|+++||+||||++..+..+++++++++++++ |+.
T Consensus 42 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~ 119 (432)
T PRK10406 42 SFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLP--GYETI 119 (432)
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcC--CchhH
Confidence 345677888884 45554444444 44555559999999999999999999999999999999999988 653
Q ss_pred ------HHHHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHh--------hhcCChH
Q 016374 74 ------FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI--------HRFGWPS 139 (390)
Q Consensus 74 ------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--------~~~gw~~ 139 (390)
.++++|+++|++.|..++...+++.|++|+|+|+++.+..+.+...|..+++.+...+. +.+|||+
T Consensus 120 ~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~ 199 (432)
T PRK10406 120 GTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRI 199 (432)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHH
Confidence 58899999999999999999999999999999999999999998899888887765543 2579999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHH-HHHHHHHH
Q 016374 140 VFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFC-HNWGTFIL 218 (390)
Q Consensus 140 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 218 (390)
+|++.+++.++.. ......||+++.+ +++ ++ +..++++++|+|+.+...+...+ ....++.+
T Consensus 200 ~F~i~~~~~ll~~-~~~~~~~e~~~~~------~~~--------~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 262 (432)
T PRK10406 200 PFALGAVLAVVAL-WLRRQLDETSQQE------TRA--------LK--EAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTF 262 (432)
T ss_pred HHHHHHHHHHHHH-HHHhcCCCCchHH------Hhh--------hc--ccccHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9998877766543 2333344433211 000 00 12346778888888776655544 36677888
Q ss_pred hhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchH
Q 016374 219 LTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA 298 (390)
Q Consensus 219 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (390)
..|+|.|+++.+|.+..+.+.......+...+++.+.|+++||++||+..... ..................++..
T Consensus 263 ~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 337 (432)
T PRK10406 263 TTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCF-----GSLAALFTVPILSALQNVSSPY 337 (432)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHH-----HHHHHHHHHHHHHHHHcCCcHH
Confidence 89999999988899988888888888888889999999999999988532211 0001111111111112222222
Q ss_pred HHHHHHHHHhhhccccccccchhc-cccCCCcchhHHHHHHHHHHH-HHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Q 016374 299 MAVLCMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVL-AGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT 376 (390)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~-g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~ 376 (390)
........+.+......+...... +..|+|.|+++.|+.+...+. .+...|.+.+.+.+...+...+++.++..+++.
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~ 417 (432)
T PRK10406 338 AAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAF 417 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH
Confidence 222222222111111222233444 445568999999999887665 355578888866444446667777777777777
Q ss_pred HHHHHhhcCCCc
Q 016374 377 AVWNLFSTGEKV 388 (390)
Q Consensus 377 ~~~~~~~~~~~~ 388 (390)
+..++.+++.|+
T Consensus 418 ~~~~~l~~~~~~ 429 (432)
T PRK10406 418 LVSLMLHRKGKG 429 (432)
T ss_pred HHHHHhhhcccc
Confidence 776666666554
No 23
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=1e-36 Score=283.24 Aligned_cols=368 Identities=14% Similarity=0.101 Sum_probs=264.2
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
++.+|.+.+|+|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++.++++ |++.+++.|++
T Consensus 56 ~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~--s~~~l~~~r~l 133 (476)
T PLN00028 56 APLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVS--SATGFIAVRFF 133 (476)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHH
Confidence 3567889999999999999999999999999999999999999999999999999999999999999 89999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhh---------hcCChHHHHHHHHHHHHHH
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH---------RFGWPSVFYSFGSLGTVWF 152 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---------~~gw~~~f~~~~~~~~~~~ 152 (390)
+|++.+.. .....+++|++|+++|++++++.....++|..+++.+.+.+.+ ..|||+.|++.+++.++..
T Consensus 134 ~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~ 212 (476)
T PLN00028 134 IGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMG 212 (476)
T ss_pred HHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHH
Confidence 99998754 4456789999999999999999988777787777666654432 2589999999999888776
Q ss_pred HHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCC
Q 016374 153 TVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF 232 (390)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 232 (390)
++.++..+++|+.+ .++.++ +.+.++......+++.++++++|...+..+...........+.|.|+++.+|+
T Consensus 213 l~~~~~~~~~p~~~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~ 285 (476)
T PLN00028 213 ILVLTLGQDLPDGN--YRELKK-----SGTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGL 285 (476)
T ss_pred HHHHHHcCcCCCCc--hhhHHh-----cCccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCC
Confidence 66665554444321 000000 00001111123456678889988887777766666677788999999888899
Q ss_pred cccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHH-HHHHHHHHhhhc
Q 016374 233 NLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM-AVLCMACSQGTD 311 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 311 (390)
++.+++.+.+...++.++++++.|+++||++||+.... +...........+.........++... .....+.+.+..
T Consensus 286 s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~--r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~ 363 (476)
T PLN00028 286 SLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRG--RLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQ 363 (476)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcch--hHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998743221 112222222222222222222222222 222223333322
Q ss_pred cccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhh
Q 016374 312 AFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS 383 (390)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
. ..........+..|+++|++.|+.+....+|+.++|.+.+ ..+..+|+..|.+.+++.+++.++.++.+
T Consensus 364 ~-~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 364 A-ACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred H-hhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 2 2222333445567889999999998877777777777654 22345799999999988888887776653
No 24
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=2.9e-36 Score=275.37 Aligned_cols=359 Identities=14% Similarity=0.125 Sum_probs=266.7
Q ss_pred cccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhh---h-hhhhhHHHHHHHH
Q 016374 4 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP---V-AAKLGLPFLLVVR 79 (390)
Q Consensus 4 ~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~~~l~~~r 79 (390)
.+|++.+|+|.|+++.|+..+.+.++..++.++.|++.||+||||++..+..+.+++.+++. . .+ |++.+++.|
T Consensus 35 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~ 112 (402)
T TIGR00897 35 WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHA--NYPLILLFY 112 (402)
T ss_pred hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCc--cHHHHHHHH
Confidence 35667789999999999999999999999999999999999999999999999998876553 3 24 688888999
Q ss_pred HHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhh-HhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhh
Q 016374 80 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGS-VTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 158 (390)
Q Consensus 80 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 158 (390)
+++|++.+...+...+.+.|++|+|+|++++|+.+.+.++|. .++|.+++.+.+.+||+..++.......+..++..+.
T Consensus 113 ~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 192 (402)
T TIGR00897 113 GIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFS 192 (402)
T ss_pred HHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhc
Confidence 999999888778888889999999999999999999999997 6899999999988897766655444333333333444
Q ss_pred ccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchh
Q 016374 159 AHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESG 238 (390)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 238 (390)
.+++++++++++ ++ +..+.+.++++++|+|+++...+..++.....+...++.|.|+++ +|.++.+.+
T Consensus 193 ~~~~~~~~~~~~-~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~ 260 (402)
T TIGR00897 193 NKDIFTPQHMQT-RE----------KFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWL 260 (402)
T ss_pred cCCCCCcccccC-Cc----------chhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHH
Confidence 444322111100 00 000112345678899999988888888888888889999999977 799999998
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHh--cCCch-HHHHHHHHHHhhhccccc
Q 016374 239 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS--HVDSP-AMAVLCMACSQGTDAFSQ 315 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~ 315 (390)
.......++..++++..|+++||++||+.... ............+.... ..++. .......+.+.+.... .
T Consensus 261 ~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~-----~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~ 334 (402)
T TIGR00897 261 QIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRW-----FGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGY-V 334 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHH-----HHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHH-H
Confidence 88888999999999999999999998753210 11111111111111111 12222 2334444445444433 2
Q ss_pred cccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhh
Q 016374 316 SGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS 383 (390)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
+. .....+.+|++|+++.|+.+....+++.++|.+.|.+.|..|+...+++.+++.+++.+...+.+
T Consensus 335 ~~-~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 335 PL-AAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred HH-HHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 22 33445677889999999999999999999999999999999999999999988888877765543
No 25
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=2.2e-36 Score=274.42 Aligned_cols=350 Identities=16% Similarity=0.114 Sum_probs=261.7
Q ss_pred cccc-cccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHH-HHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 4 AILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG-FGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 4 ~lp~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
.+|. +++++|.|+.+.|++.+.+.+...+.+++.|+++||+||||.++ .+.....++.+++++++ |++.+++.|++
T Consensus 19 ~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~ 96 (375)
T TIGR00899 19 TLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNR--NYFLLLVLGVL 96 (375)
T ss_pred HHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcc--hHHHHHHHHHH
Confidence 3454 57899999999999999999999999999999999999988755 45666677778888988 89999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHH--HHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhc
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRS--LALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 159 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 159 (390)
+|.+.+...|...++..|+.|+++|++. .+....+.++|..++|.+++.+.+.+|||+.|++.+++.++..+..++..
T Consensus 97 ~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 176 (375)
T TIGR00899 97 LSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFL 176 (375)
T ss_pred HHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhC
Confidence 9988887888888999999887777754 68888889999999999999999999999999999888777766666667
Q ss_pred cCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhh
Q 016374 160 HSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGL 239 (390)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 239 (390)
||+|+++++.++ +.+.++.+++|+++......++..........+.|.|+++.+|.++.+.+.
T Consensus 177 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 239 (375)
T TIGR00899 177 PSYPRGAPGALT-----------------RLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGL 239 (375)
T ss_pred CCcccCcccccC-----------------cchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHH
Confidence 775543221100 112234567777776666555555555666778899998888999999998
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHH-HHHHHHHHhhhcccccccc
Q 016374 240 FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM-AVLCMACSQGTDAFSQSGL 318 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 318 (390)
..........++.++.+++.||+++|+.... ...............++.+. .....+.+.+.+.. .+..
T Consensus 240 ~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~ 309 (375)
T TIGR00899 240 MMGTAAGLEIPFMLLAGYLIKRFGKRRLMLL---------AALAGVAFYTGLAADNSLWALLMLQLLNAIFIGIL-AGIG 309 (375)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhcchhHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 8877777788889999999999998854322 11111111111111122222 22333334333332 3334
Q ss_pred chhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh
Q 016374 319 YSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 319 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
.....+..|++++++.++.+...++|..++|.+.|.+.|..||+..+++.+++.+++.+...+.
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 310 MLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhee
Confidence 4455566677788999999999999999999999999999999999999988888877765443
No 26
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=4.1e-36 Score=273.66 Aligned_cols=336 Identities=17% Similarity=0.202 Sum_probs=258.3
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
.+.+|.+.+|+|.|+++.+++.+.+.++..+++++.|+++||+|||+.+..+.++.+++.+...+++ +++.+++.|++
T Consensus 25 ~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 102 (385)
T TIGR00710 25 LPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSN--NIETLLVLRFV 102 (385)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHH
Confidence 3567889999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
+|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.++.+||+.|++.++..++..+..+...||
T Consensus 103 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (385)
T TIGR00710 103 QAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPE 182 (385)
T ss_pred HHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999888877776666666666
Q ss_pred CCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhh
Q 016374 162 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 241 (390)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 241 (390)
+++++++.++++ ...++++.+|+|+++...+..............+.|.++++.+|.++.+.+.+.
T Consensus 183 ~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 248 (385)
T TIGR00710 183 TLPYEARIQIST--------------YFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLF 248 (385)
T ss_pred CCCCcccCCHHH--------------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHH
Confidence 544322211111 022456678899988887777777777788888999999988899999999999
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHH--hcCCchHHH-HHHHHHHhhhcccccccc
Q 016374 242 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL--SHVDSPAMA-VLCMACSQGTDAFSQSGL 318 (390)
Q Consensus 242 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 318 (390)
....++.++++++.+++.||+++|+....+ ..........+... ...+..... ....+.+.+...... ..
T Consensus 249 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~ 321 (385)
T TIGR00710 249 ALNIIAMIFGGFLNGRFIKKWGAKSLLRMG------LILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISS-IA 321 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHH------HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH-HH
Confidence 999999999999999999999988543221 11111111111111 111222222 223333444443333 33
Q ss_pred chhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 016374 319 YSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 360 (390)
Q Consensus 319 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g 360 (390)
.....+..|++++++.++.+.....++.+.+.+.+.+.+..+
T Consensus 322 ~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~~~ 363 (385)
T TIGR00710 322 MAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVSLIHGNTA 363 (385)
T ss_pred HHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHhccccCh
Confidence 333344456789999999999988877777777775444333
No 27
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=1e-36 Score=279.59 Aligned_cols=356 Identities=14% Similarity=0.143 Sum_probs=254.0
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
++..|++++++|.|+.+.+++.+.+.++..++.++.|+++||+|||+++..+.++.+++.+++++++ +++.+++.|++
T Consensus 32 ~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l 109 (405)
T TIGR00891 32 ALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAP--GYITMFIARLV 109 (405)
T ss_pred HHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHH
Confidence 4567889999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcC--ChHHHHHHHHHHHHHHHHHHhhc
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG--WPSVFYSFGSLGTVWFTVWLSKA 159 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--w~~~f~~~~~~~~~~~~~~~~~~ 159 (390)
+|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+ ||+.|++.++..++.. ......
T Consensus 110 ~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~-~~~~~~ 188 (405)
T TIGR00891 110 IGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL-WLRKNI 188 (405)
T ss_pred HHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH-HHHHhC
Confidence 9999999999999999999999999999999999999999999999999988776 9999988665555443 334445
Q ss_pred cCCCCCCCCCchhh-hhhhhhcccCCCCCCcc-------hhhhhh-cC-chhHHHHHHHHHHHHHHHHHhhchHHHHhHh
Q 016374 160 HSSPAEDPQLRPAE-KKLIVSSCASKEPVKTI-------PWGLIL-SK-PPVWALIVSHFCHNWGTFILLTWMPTYYNQV 229 (390)
Q Consensus 160 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 229 (390)
||+++.+++.++++ ..+..++...+++..+. ..++.. ++ +.+..........+........+.|.|+++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (405)
T TIGR00891 189 PEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKAD 268 (405)
T ss_pred CCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 66543221111110 00000000000000000 001100 11 1122333334444555566778899999988
Q ss_pred cCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHH-HHHHHHHh
Q 016374 230 LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQ 308 (390)
Q Consensus 230 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 308 (390)
+|.++.+.+.+.....++.++++++.+++.||+++|+..... ...... .........++.+.. ....+.+.
T Consensus 269 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 340 (405)
T TIGR00891 269 LGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCS-------LLAGQL-LIIPVFAIGANVAVLGLGLFFQQM 340 (405)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHH-------HHHHHH-HHHHHHHhCCchHHHHHHHHHHHH
Confidence 899999999999999999999999999999999998543321 111101 111111112232222 22233333
Q ss_pred hhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chhHHHHH
Q 016374 309 GTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDVFKVS 368 (390)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g-~~~~~~~~ 368 (390)
..............+..|+++|+++.|+.+...++|..++|.+.|.+.|+.| |+..+...
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 341 LVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred HHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 3333333333344555667899999999999999999999999999999977 87666553
No 28
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-37 Score=263.64 Aligned_cols=362 Identities=18% Similarity=0.250 Sum_probs=297.4
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh-hHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL-GLPFLLVVRV 80 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~ 80 (390)
++.-+.+.+|+|+|++|.+++.++..+...+..++.|.+.||+|.|++...+.++..+-.+..+++.++ +++++++.+.
T Consensus 34 s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gl 113 (417)
T COG2223 34 SPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGL 113 (417)
T ss_pred HHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHH
Confidence 455677889999999999999999999999999999999999999999999999999999999988621 4459999999
Q ss_pred HHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcC---ChHHHHHHHHHHHHHHHHHHh
Q 016374 81 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG---WPSVFYSFGSLGTVWFTVWLS 157 (390)
Q Consensus 81 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g---w~~~f~~~~~~~~~~~~~~~~ 157 (390)
+.|++. ....+..+++++++|||++|.++|+.. ..|+|..+...++..+....| ||..-.+..+..++..+..++
T Consensus 114 l~G~~G-asFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~ 191 (417)
T COG2223 114 LLGLAG-ASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWL 191 (417)
T ss_pred HHhccc-ceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999995 578889999999999999999999999 999999999999999999999 999999988888888888888
Q ss_pred hccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccch
Q 016374 158 KAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTES 237 (390)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 237 (390)
...|.|+.+++.++.. ...++.+.++++.|.+.+.++....++.++..++|.|+++++|.++.++
T Consensus 192 ~~~d~p~~r~~~~~~~---------------~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~A 256 (417)
T COG2223 192 GMNDVPEHRASVKPQL---------------PAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTA 256 (417)
T ss_pred HhCCChhhhccccccc---------------hhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhH
Confidence 8888776433222111 1335568889999999999999999999999999999999999999999
Q ss_pred hhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHh----cCCchHHHHHHHHHHhhhccc
Q 016374 238 GLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS----HVDSPAMAVLCMACSQGTDAF 313 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 313 (390)
+.+.....+.+.+.++++|+++||+|.+|...... ..+..+...+.... ...+.......++......+.
T Consensus 257 g~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~ 330 (417)
T COG2223 257 GLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVF------VGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGL 330 (417)
T ss_pred HHHHHHHHHHHHHHHhccchhhhhccchhHHHHHH------HHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999986543211 11111111111111 113344444444444445555
Q ss_pred cccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHHHHHHHhhcCC
Q 016374 314 SQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDVFKVSVGLYLVGTAVWNLFSTGE 386 (390)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (390)
.+....-......|++.|.+.|+....+.+|+..-|...|...|..| +...|++...+.+++.+..+...+++
T Consensus 331 GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 331 GNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred CcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56666777777788899999999999999999999999999999855 88999999999999998877765443
No 29
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=4.5e-36 Score=280.61 Aligned_cols=367 Identities=15% Similarity=0.147 Sum_probs=245.0
Q ss_pred ccccccccccCcCcch-HHH-----HHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHH--
Q 016374 3 IAILPMSAEFNWNPAT-VGL-----IQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPF-- 74 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~-~g~-----~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~-- 74 (390)
...|.+.++++.+.++ .++ ..++..++..+++++.|+++||+|||+++..+.++++++++++++++ |++.
T Consensus 37 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~--~~~~~g 114 (490)
T PRK10642 37 FVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIP--SYATIG 114 (490)
T ss_pred HHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcc--cHHHHH
Confidence 4567788888644322 222 24778899999999999999999999999999999999999999999 8764
Q ss_pred ------HHHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHh--------hhcCChHH
Q 016374 75 ------LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI--------HRFGWPSV 140 (390)
Q Consensus 75 ------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--------~~~gw~~~ 140 (390)
++++|+++|++.|...+...+++.|++|+|+|+++.++...+..+|..+++.+...+. +.+|||+.
T Consensus 115 ~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~ 194 (490)
T PRK10642 115 IWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIP 194 (490)
T ss_pred HHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHH
Confidence 7899999999999999999999999999999999999999998899888887665543 25799999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcC-chhHH-HHHHHHHHHHHHHHH
Q 016374 141 FYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSK-PPVWA-LIVSHFCHNWGTFIL 218 (390)
Q Consensus 141 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~ 218 (390)
|++.+++.++. ++.....||+|+..++.++.++. +.+..++.++.++++++++ ++.+. .....++....++..
T Consensus 195 f~i~~~~~l~~-~~~~~~~~esp~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (490)
T PRK10642 195 FFIALPLGIIG-LYLRHALEETPAFQQHVDKLEQG----DREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYML 269 (490)
T ss_pred HHHHHHHHHHH-HHHHHcCCCChhHHHHHHhhhhh----ccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99977655543 33445567765432111100000 0000011123345556553 22222 223334455677888
Q ss_pred hhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchH
Q 016374 219 LTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA 298 (390)
Q Consensus 219 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (390)
..|.|.|+++.+|++..+.+.......++..++.++.|+++||+|||+....+ .................++..
T Consensus 270 ~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 343 (490)
T PRK10642 270 LTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILG------SVALFVLAIPAFILINSNVIG 343 (490)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH------HHHHHHHHHHHHHHHhCCCHH
Confidence 89999999887899888877777778888999999999999999999532211 111111111111111222222
Q ss_pred H-HHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CchhHHHHHHHHHHHHH
Q 016374 299 M-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG-SWDDVFKVSVGLYLVGT 376 (390)
Q Consensus 299 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~-g~~~~~~~~~~~~~~~~ 376 (390)
. .....+.+.+.+...........+..|++.|+++.|..+.....++.++|.+.+++.+.. ++...++...+..+++.
T Consensus 344 ~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~ 423 (490)
T PRK10642 344 LIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGL 423 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 2 222233333222222222223334566689999999866667788899999999998863 45555555555555555
Q ss_pred HHHHHh
Q 016374 377 AVWNLF 382 (390)
Q Consensus 377 ~~~~~~ 382 (390)
+..++.
T Consensus 424 ~~~~~~ 429 (490)
T PRK10642 424 ITGVTM 429 (490)
T ss_pred HHHHHh
Confidence 554443
No 30
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=6.3e-36 Score=271.56 Aligned_cols=362 Identities=14% Similarity=0.132 Sum_probs=262.7
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
.+.+|++.+++|+|+++.+++.+++.++..++.++.|+++||+|||+++..+..+.+++...+.+++ |++.+++.|++
T Consensus 11 ~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~l 88 (377)
T PRK11102 11 LPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ--TIDQLIYMRFL 88 (377)
T ss_pred hccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHH
Confidence 4678899999999999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
+|++.+...+...+++.|++|+|+|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++..+......||
T Consensus 89 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (377)
T PRK11102 89 HGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPE 168 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999988999999999999999999999999999999999999999999999999999999888887776666666666
Q ss_pred CCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhh
Q 016374 162 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 241 (390)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 241 (390)
+++++++.+.+.+ +...++++.+|+|+++...+..++..........+.|.++.+.+|.++.+.+...
T Consensus 169 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~ 236 (377)
T PRK11102 169 TLPKERRQPFHLR------------TTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYF 236 (377)
T ss_pred cCcccccCCCChH------------HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHH
Confidence 5433221111000 0123455678888888777777777777777788889888888899999999999
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHh-cCCchHHHH-HHHHHHhhhccccccccc
Q 016374 242 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS-HVDSPAMAV-LCMACSQGTDAFSQSGLY 319 (390)
Q Consensus 242 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 319 (390)
....++.++++++.+++.||+++|+....+. .........+.... .....+... .......+... ......
T Consensus 237 ~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 309 (377)
T PRK11102 237 ALNIVFLFVMTIINSRFVRRVGALNMLRFGL------WIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSM-ISSNAM 309 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-hhHHHH
Confidence 9999999999999999999999985433221 11111111111111 112222222 22222222222 222233
Q ss_pred hhccccCCCcchhHHHHHHHHHH-HHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhcCC
Q 016374 320 SNHQDIAPRYSGVLLGLSNTAGV-LAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGE 386 (390)
Q Consensus 320 ~~~~~~~~~~~~~~~g~~~~~~~-~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (390)
....+..|++++++.++.+.... +|..+++.+.+ ..+ .++...+....++.+++.+..++.++++
T Consensus 310 ~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (377)
T PRK11102 310 AVILDEFPHMAGTASSLAGTLRFGIGAIVGALLSL-APF-TSAWPMVWSMAFCSILSILFYLYASRPK 375 (377)
T ss_pred HHHhccccccchHHHHHHHHHHHHHHHHHHHHHHh-ccC-CChHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 33455567899999999877654 45555555543 222 2333444444455555544444444443
No 31
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2.4e-36 Score=278.74 Aligned_cols=352 Identities=14% Similarity=0.123 Sum_probs=249.7
Q ss_pred ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Q 016374 3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFM 82 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 82 (390)
+.+|.+++|+|+|+.+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++++++ +++.++++|+++
T Consensus 39 ~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~ 116 (426)
T PRK12307 39 YIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLAS--GVIMLTLSRFIV 116 (426)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHH
Confidence 456888999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred hhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCC
Q 016374 83 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 162 (390)
Q Consensus 83 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (390)
|++.+...+....++.|++|+|+|+++.++...+..+|..+++.+.+.+.+..+||+.|++..+..++. .......||+
T Consensus 117 G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~-~~~~~~~p~~ 195 (426)
T PRK12307 117 GMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLV-IYIRARAPES 195 (426)
T ss_pred HHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHH-HHHHHHCCCC
Confidence 999999999999999999999999999999999999999999999999999999999998754433322 2222222332
Q ss_pred CCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHH---HHHHHHHHHhhchHHHHhHhcCCcccchhh
Q 016374 163 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHF---CHNWGTFILLTWMPTYYNQVLHFNLTESGL 239 (390)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 239 (390)
++.+++ +.+...++.+......+.++++++|+|.++....... ...........++|.|+++ .|.++.+.+.
T Consensus 196 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~ 270 (426)
T PRK12307 196 KEWEEA----KLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSN 270 (426)
T ss_pred hHHHHh----hhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHH
Confidence 211100 0000000000000111235677888887765443322 2222334467789999988 5999999999
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhc--cccccc
Q 016374 240 FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTD--AFSQSG 317 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 317 (390)
..+...++.++++++.+++.||++||+.... .................+... ......++.+.. ......
T Consensus 271 ~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 342 (426)
T PRK12307 271 LMTAAAFGTVLGNIVWGLCADRIGLKKTFSI-------GLLMSFLFIFPLFRIPQDNYL-LLGACLFGLMATNVGVGGLV 342 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHH-------HHHHHHHHHHHHHHHccccHH-HHHHHHHHHHHhcccHhHHH
Confidence 8899999999999999999999998843221 111111111111111222222 222222222211 111111
Q ss_pred cchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHH
Q 016374 318 LYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVG 370 (390)
Q Consensus 318 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~ 370 (390)
.....+..|+++|+++.|+.+....+++.++|.+.|++.|+.|+....++...
T Consensus 343 ~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~~~ 395 (426)
T PRK12307 343 PKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVA 395 (426)
T ss_pred HHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 22334555668999999999999999999999999999999887754444433
No 32
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=9.1e-36 Score=272.33 Aligned_cols=353 Identities=12% Similarity=0.035 Sum_probs=261.4
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
.+.+|++.++++.+..+.++..+++.+++.+++++.|+++||+|||+++..+.++++++.+++.+++ |++.++++|++
T Consensus 36 ~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l 113 (413)
T PRK15403 36 QPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTT--SMTQFLIARFI 113 (413)
T ss_pred ccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHH
Confidence 4678889999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
+|++.+...+....++.|++|+++|++++++......+|..+||.+++.+.++.|||+.|++.+++.++..+..++..||
T Consensus 114 ~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~ 193 (413)
T PRK15403 114 QGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPE 193 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99998876777788899999999999999999999999999999999999998999999999998888776655556676
Q ss_pred CCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhh
Q 016374 162 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 241 (390)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 241 (390)
+++++++..+. + ....++++++|||+++...+...+.......+..+.|.++++.+|.++.+.++..
T Consensus 194 ~~~~~~~~~~~-~------------~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~ 260 (413)
T PRK15403 194 TVKRGAVPFSA-K------------SVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQ 260 (413)
T ss_pred CccccCCCCCh-H------------HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHH
Confidence 54322111000 0 0123566789999999988888888888888888999999998899999999988
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchH-HHHHHHHHHhhhccccccccch
Q 016374 242 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA-MAVLCMACSQGTDAFSQSGLYS 320 (390)
Q Consensus 242 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 320 (390)
.....+..+++.+.+++.+|..+++..... ......+......... ...+.+. ......+.+.+.+...+ ....
T Consensus 261 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~--~~~~~ig~~l~~~~~~--~~~~~~~~~~~~~~l~~~G~~~~~p-~~~~ 335 (413)
T PRK15403 261 VPVFGAVIVANAIVARFVKDPTEPRFIWRA--VPIQLVGLALLIVGNL--LWPHVWLWSVLGTSLYAFGIGLIFP-TLFR 335 (413)
T ss_pred HHHHHHHHHHHHHHHHHhccCCchhHHHHH--HHHHHHHHHHHHHHHH--HccccHHHHHHHHHHHHHHHHHHhH-HHHH
Confidence 888888888888877766544333221111 0111111111111111 1122222 23333344444443332 2222
Q ss_pred hccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Q 016374 321 NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVG 375 (390)
Q Consensus 321 ~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~ 375 (390)
......+..+|++.++.+.....+...++...+++.++. -...+....++..+.
T Consensus 336 ~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 389 (413)
T PRK15403 336 FTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNG-GRLPFHLLAVVAGVI 389 (413)
T ss_pred HHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CchHHHHHHHHHHHH
Confidence 222222345899999999999999999999999998874 455555444444433
No 33
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=6.2e-37 Score=287.51 Aligned_cols=345 Identities=17% Similarity=0.218 Sum_probs=271.8
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
++.+|.+.+|+|.|+++.+++.+.+.++..++.++.|+++||+|||+.+..+.++.+++.+++++++ |++.++++|++
T Consensus 22 ~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~ 99 (485)
T TIGR00711 22 NVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAP--NLELMIIFRVI 99 (485)
T ss_pred HHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcC--CHHHHHHHHHH
Confidence 4567999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
+|++.+...+...+++.|++|+++|++++++......+|..++|.+++++.++++||+.|++.+.+.++..++..+..||
T Consensus 100 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 179 (485)
T TIGR00711 100 QGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPR 179 (485)
T ss_pred HHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999888887776666666666
Q ss_pred CCCCCCCCchhhhh---------------h-h-------------------------hhcccCCCCCCcchhhhhhcCch
Q 016374 162 SPAEDPQLRPAEKK---------------L-I-------------------------VSSCASKEPVKTIPWGLILSKPP 200 (390)
Q Consensus 162 ~~~~~~~~~~~~~~---------------~-~-------------------------~~~~~~~~~~~~~~~~~~~~~~~ 200 (390)
+++++++..+.... + . .++.+++++ .. ..+++|+|+
T Consensus 180 ~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~ 256 (485)
T TIGR00711 180 DKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNP--LV-DLRLFKYRN 256 (485)
T ss_pred ccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCC--cc-CHHHHcCCC
Confidence 44322221110000 0 0 000111111 11 235788999
Q ss_pred hHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 016374 201 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG 280 (390)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 280 (390)
++...+..++..+..+....+.|.|+++.+|.++.+++.......++.++++++.|++.||+++|+. ......
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-------~~~g~~ 329 (485)
T TIGR00711 257 FTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKL-------VTIGLI 329 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHH-------HHHHHH
Confidence 9988888888888888889999999999999999999999999999999999999999999998843 222222
Q ss_pred HHHHHHHHHH--HhcCCc-hHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016374 281 FLGPAFFLTQ--LSHVDS-PAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 357 (390)
Q Consensus 281 ~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~ 357 (390)
....+..... ...... ........+.+.+.+....+......++.++++++++.|+.+..+.+|+.+|+.+.+.+.+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 330 LYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222 112222 2233344455555555554555555677788999999999999999999999999999987
Q ss_pred c
Q 016374 358 H 358 (390)
Q Consensus 358 ~ 358 (390)
+
T Consensus 410 ~ 410 (485)
T TIGR00711 410 N 410 (485)
T ss_pred H
Confidence 4
No 34
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=2.1e-35 Score=268.07 Aligned_cols=345 Identities=14% Similarity=0.057 Sum_probs=252.5
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
++.+|++.+|+|.|+.++|++.+.+.++..+++++.|+++||+|||+++..+.++.+++...+++++ |++.++++|++
T Consensus 26 ~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l 103 (381)
T PRK03633 26 NTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMV--GFWSWLAWRFV 103 (381)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
+|++.+...+...+.+.|..++++|+++++....+.++|..+||.+++.+.+...|+..+. .+........+.. . +.
T Consensus 104 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~-~-~~ 180 (381)
T PRK03633 104 AGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV-TGLVLAAILPLLF-T-RI 180 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH-HHHHHHHHHHHHH-h-cc
Confidence 9999998888888888899999999999999999999999999999999877644444333 2222222211221 1 21
Q ss_pred CCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhh
Q 016374 162 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 241 (390)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 241 (390)
+++++++ + +..+.++.+|+|.++......+.....+.....++|.|+++ .|.++.+.+...
T Consensus 181 ~~~~~~~----~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~ 241 (381)
T PRK03633 181 LNQQAEN----H--------------DSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWM 241 (381)
T ss_pred cCCCCCC----C--------------CCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHH
Confidence 1111100 0 01234457788887765544455555566677889999988 599999999988
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchh
Q 016374 242 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 321 (390)
Q Consensus 242 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (390)
+...++.++++...+++.||+++|+....+ ............ ..........+.+.+.....+......
T Consensus 242 ~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~-------~~~~~~~~~~~~----~~~~~~~~~~l~g~~~~~~~p~~~~~~ 310 (381)
T PRK03633 242 ALLVSAGILGQWPIGRLADRFGRLLVLRVQ-------VFVVILGSIAML----SQAAMAPALFILGAAGFTLYPVAMAWA 310 (381)
T ss_pred HHHHHHHHHHHhhhHHHHHHcCcHHHHHHH-------HHHHHHHHHHHh----hhHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 999999999999999999999988432221 111111111111 111222223333333333333333334
Q ss_pred ccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH
Q 016374 322 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 381 (390)
Q Consensus 322 ~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 381 (390)
.+..++++++...+..+...++|+.+||.+.|++.|+.+++..|.+.+.+.++.....+.
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 311 CEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 455566677888888888899999999999999999999999999888887766544433
No 35
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=8.9e-36 Score=269.39 Aligned_cols=340 Identities=14% Similarity=0.086 Sum_probs=259.1
Q ss_pred ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh---hhHHHHHHHH
Q 016374 3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK---LGLPFLLVVR 79 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~---~~~~~l~~~r 79 (390)
+.+|.+.+|++.++.+.+++.+++.++..++.++.|+++||+||||++..+..+..++..+..+++. .|++.+++.|
T Consensus 20 ~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (365)
T TIGR00900 20 VALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLA 99 (365)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH
Confidence 4567788899999999999999999999999999999999999999999999988888877766541 1678999999
Q ss_pred HHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhc
Q 016374 80 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 159 (390)
Q Consensus 80 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 159 (390)
+++|++.+...+...+++.|++|+|+|++++++.+....+|..++|.+++.+.+..|||+.|++.++..++..+..+...
T Consensus 100 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 179 (365)
T TIGR00900 100 GILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVR 179 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999988776666554444333
Q ss_pred cCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHh-hchHHHHhHhcCCcccchh
Q 016374 160 HSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL-TWMPTYYNQVLHFNLTESG 238 (390)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~g~~~~~~~ 238 (390)
+++++++++.+.+++. . .+....+++++|+|.++...+..+.......... .+.|.|.++.+|.++.+.+
T Consensus 180 ~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (365)
T TIGR00900 180 IPELAASEIQALSNAV-L--------RDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYG 250 (365)
T ss_pred cccCCCccccccchhH-H--------HHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHH
Confidence 2222211111100000 0 0012345667889999888888777777777666 8889999987899999999
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCC--chHHHHHHHHHHhhhcccccc
Q 016374 239 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD--SPAMAVLCMACSQGTDAFSQS 316 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 316 (390)
.......++.++++++.+++.||.++|+.. . .+....+.........+ .+.......+.+.+.+.....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 321 (365)
T TIGR00900 251 WVLAAFGLGALLGALLLGLLGRYFKRMALM-------T--GAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVP 321 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchhHHH-------H--HHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888322 1 11111121111111112 223334445555555554444
Q ss_pred ccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 016374 317 GLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 360 (390)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g 360 (390)
......+..|+|+|+++.|+.+...+++..++|.+.|.+.|+.|
T Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 322 QGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44455566677899999999999999999999999999998753
No 36
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=2.3e-35 Score=275.50 Aligned_cols=349 Identities=14% Similarity=0.135 Sum_probs=266.6
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
++.+|.+.+|+|.|+.+.+++.+.+.++..++.++.|+++||+|||++++.+..+.+++.+.+.+++ +++.+++.|++
T Consensus 30 ~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l 107 (471)
T PRK10504 30 NTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSG--TLNELLLARVL 107 (471)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhC--CHHHHHHHHHH
Confidence 3567889999999999999999999999999999999999999999999999999999999999988 89999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
+|++.+...+...+++.|++|+++|+++.+......++|..++|.+++.+.++.|||+.|.+......+..+......|+
T Consensus 108 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 108 QGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999887777666555555555
Q ss_pred CCCCCCCCchhhh----------------hh-----------------------hhhcccCCCCCCcchhhhhhcCchhH
Q 016374 162 SPAEDPQLRPAEK----------------KL-----------------------IVSSCASKEPVKTIPWGLILSKPPVW 202 (390)
Q Consensus 162 ~~~~~~~~~~~~~----------------~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (390)
++.+..+.+.... .+ ..+++ +++++..+. +++|||+++
T Consensus 188 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~l~~~~~~~ 264 (471)
T PRK10504 188 YTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHAR--NNNRALFSL-KLFRTRTFS 264 (471)
T ss_pred ccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHh--cCCCCccCH-HHhcccchH
Confidence 4332222111100 00 00011 111112233 478999999
Q ss_pred HHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Q 016374 203 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL 282 (390)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 282 (390)
......++..........+.|.|+++..|.++.+.++......++.+++.++.+++.||+++|+... .+....
T Consensus 265 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~-------~~~~~~ 337 (471)
T PRK10504 265 LGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLV-------ATTLGL 337 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHH-------HHHHHH
Confidence 8888888888887777888999999888999999999999888999999999999999999884322 111211
Q ss_pred HHH-HHHHHHhcCCchHH-HHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 016374 283 GPA-FFLTQLSHVDSPAM-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 360 (390)
Q Consensus 283 ~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g 360 (390)
... ..+......++.+. .....+.+.+.+...........+..++|+++.++|+.++.+.+|..+|+.+.|.+.+..+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 338 ALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 111 11111111222222 2233334444444444444455566777899999999999999999999999999988866
Q ss_pred ch
Q 016374 361 WD 362 (390)
Q Consensus 361 ~~ 362 (390)
+.
T Consensus 418 ~~ 419 (471)
T PRK10504 418 QQ 419 (471)
T ss_pred hh
Confidence 53
No 37
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=2.8e-35 Score=275.79 Aligned_cols=367 Identities=13% Similarity=0.101 Sum_probs=240.5
Q ss_pred ccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhh---------h-hhhHHHHHHHHH
Q 016374 11 EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA---------A-KLGLPFLLVVRV 80 (390)
Q Consensus 11 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------~-~~~~~~l~~~r~ 80 (390)
+++.++.+.+++.+.+.++..++++++|+++||+|||++++.+..++.++.+.++++ + ..+++.++++|+
T Consensus 49 ~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~ 128 (479)
T PRK10077 49 SESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRI 128 (479)
T ss_pred cccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHH
Confidence 348899999999999999999999999999999999999999999999998887763 1 013577889999
Q ss_pred HHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHh--------hhcCChHHHHHHHHHHHHHH
Q 016374 81 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI--------HRFGWPSVFYSFGSLGTVWF 152 (390)
Q Consensus 81 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--------~~~gw~~~f~~~~~~~~~~~ 152 (390)
++|++.|...+...++++|++|+|+|++++++.+.+..+|..+++.++..+. +.+|||+.|++.+++.++..
T Consensus 129 l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~ 208 (479)
T PRK10077 129 IGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL 208 (479)
T ss_pred HHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988776554 35699999999887777765
Q ss_pred HHHHhhccCCCCCCCCCc-hhhhhhhhhccc-CCCC-CCcchhhhhhc-----CchhHH-----HH----HHHHHHHHHH
Q 016374 153 TVWLSKAHSSPAEDPQLR-PAEKKLIVSSCA-SKEP-VKTIPWGLILS-----KPPVWA-----LI----VSHFCHNWGT 215 (390)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~-~~~~~~~~~~~-----~~~~~~-----~~----~~~~~~~~~~ 215 (390)
+ ..++.||+|+...+++ +++.+...++.. .++. ....+.++..+ .+..+. .. ...+......
T Consensus 209 ~-~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (479)
T PRK10077 209 M-LLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGI 287 (479)
T ss_pred H-HHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhCh
Confidence 4 4556788765321111 111111000000 0000 00001111111 111110 00 1111111122
Q ss_pred HHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHh--c
Q 016374 216 FILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS--H 293 (390)
Q Consensus 216 ~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 293 (390)
+...++.|.+.++ .|.+...........++..+++.++.+++.||++||+....+. . ........+.... .
T Consensus 288 ~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~--~----~~~v~~~~l~~~~~~~ 360 (479)
T PRK10077 288 NVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGA--L----GMAIGMFSLGTAFYTQ 360 (479)
T ss_pred hHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhH--H----HHHHHHHHHHHHHhcC
Confidence 3344566777766 6888777777777788899999999999999999985433221 1 1111111111111 1
Q ss_pred CCchHHHHHHHHHHhhhccccccccchhccc-cCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH------hcCCchhHHH
Q 016374 294 VDSPAMAVLCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL------QHGSWDDVFK 366 (390)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~------~~~g~~~~~~ 366 (390)
...........+.+.+......+.......| .|+++|+++.|+.+..+.++..+++.+.+.+. |..++...|+
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 440 (479)
T PRK10077 361 APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYW 440 (479)
T ss_pred cccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHH
Confidence 1222222333333333333333444444444 45589999999999999999999987776554 4667778888
Q ss_pred HHHHHHHHHHHHHHHhhcC
Q 016374 367 VSVGLYLVGTAVWNLFSTG 385 (390)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~ 385 (390)
+.++..+++.++.+++.++
T Consensus 441 ~~~~~~~~~~~~~~~~~~e 459 (479)
T PRK10077 441 IYGCMGVLAALFMWKFVPE 459 (479)
T ss_pred HHHHHHHHHHHHHHhcccc
Confidence 8777777776665554433
No 38
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=2.3e-35 Score=281.07 Aligned_cols=367 Identities=15% Similarity=0.141 Sum_probs=260.1
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
+..+|.+.++++++..+.+++.+++.++.+++.+++|+++||+|||+.++++.++.+++.+++++++ +++.++++|++
T Consensus 187 s~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~--s~~~llv~R~l 264 (742)
T TIGR01299 187 GFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQ--GYGFFLFCRLL 264 (742)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHH
Confidence 3567889999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhc-------------CChHHHHHHHHHH
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------------GWPSVFYSFGSLG 148 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------------gw~~~f~~~~~~~ 148 (390)
+|++.+...+...+++.|++|+++|++.+++...+..+|.++++.++..+...+ +||+.+++.+++.
T Consensus 265 ~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ 344 (742)
T TIGR01299 265 SGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPC 344 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999887766533 5899988877766
Q ss_pred HHHHHHHHhhccCCCCCCCCCchhhh-hh----h--------------------hhcc-cC-----CCCCCc--------
Q 016374 149 TVWFTVWLSKAHSSPAEDPQLRPAEK-KL----I--------------------VSSC-AS-----KEPVKT-------- 189 (390)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~--------------------~~~~-~~-----~~~~~~-------- 189 (390)
++. ++..++.||+|+......+.++ .. . .... .+ ++....
T Consensus 345 ll~-ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (742)
T TIGR01299 345 VFA-IGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVR 423 (742)
T ss_pred HHH-HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhh
Confidence 555 4556677998864211100000 00 0 0000 00 000000
Q ss_pred ---------chhhhhhcCc---hhHHHHHHHHHHHHHHHHHhhchHHHHhHh----c-----------------CCccc-
Q 016374 190 ---------IPWGLILSKP---PVWALIVSHFCHNWGTFILLTWMPTYYNQV----L-----------------HFNLT- 235 (390)
Q Consensus 190 ---------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~-----------------g~~~~- 235 (390)
.+++++++.+ +.+.+++.+++..++++++..|+|.++++. + +++..
T Consensus 424 ~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (742)
T TIGR01299 424 ALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLEN 503 (742)
T ss_pred hhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhh
Confidence 0233444433 345677788888899999999999876541 0 00000
Q ss_pred --------------------------------------------------------------------------------
Q 016374 236 -------------------------------------------------------------------------------- 235 (390)
Q Consensus 236 -------------------------------------------------------------------------------- 235 (390)
T Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 583 (742)
T TIGR01299 504 QIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGC 583 (742)
T ss_pred hhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCcc
Confidence
Q ss_pred ------------chhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc-hHHHHH
Q 016374 236 ------------ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDS-PAMAVL 302 (390)
Q Consensus 236 ------------~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 302 (390)
.......+..++.+++.++.++++||+|||+.+ ..++++.++........++ ....+.
T Consensus 584 ~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l---------~~~~~lsai~~ll~~~~~s~~~ll~~ 654 (742)
T TIGR01299 584 PIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRML---------AGSMVLSCISCFFLSFGNSESAMIAL 654 (742)
T ss_pred CccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH---------HHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 012234556688899999999999999999432 2222222222222222222 223333
Q ss_pred HHHHHhhhccccccccchhccccC-CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH
Q 016374 303 CMACSQGTDAFSQSGLYSNHQDIA-PRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 381 (390)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 381 (390)
.++.+++... ..+....+..+.. ++.|++++|+.+....+|.+++|.+.|.+.+. +...++++.+++.+++.++.++
T Consensus 655 ~~l~g~~~~~-~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~ 732 (742)
T TIGR01299 655 LCLFGGLSIA-AWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALK 732 (742)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHh
Confidence 3333443333 3344445555554 48999999999999999999999999988875 3567777777777776665554
Q ss_pred h
Q 016374 382 F 382 (390)
Q Consensus 382 ~ 382 (390)
+
T Consensus 733 L 733 (742)
T TIGR01299 733 L 733 (742)
T ss_pred C
Confidence 4
No 39
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=9.4e-37 Score=274.41 Aligned_cols=332 Identities=24% Similarity=0.425 Sum_probs=253.8
Q ss_pred cccc-ccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 3 IAIL-PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 3 ~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
+.+| .+.+|+|.|+.+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++..+..+++ |.+.+++.|++
T Consensus 17 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 94 (352)
T PF07690_consen 17 PALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFAS--NFWLLLIARFL 94 (352)
T ss_dssp HHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHH
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhh--hHHHHhhhccc
Confidence 4566 78899999999999999999999999999999999999999999999999999977666766 77899999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
+|++.+...+...+++.|++|+|+|++++++.+...++|..++|.+++.+.+..+||+.|++.+++.++..++...+.++
T Consensus 95 ~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~ 174 (352)
T PF07690_consen 95 LGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPE 174 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC--
T ss_pred cccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999988887654455555
Q ss_pred CCCCCCCCchhhhhhhhhcccCCCCCCcc-hhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCc-ccchhh
Q 016374 162 SPAEDPQLRPAEKKLIVSSCASKEPVKTI-PWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFN-LTESGL 239 (390)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~-~~~~~~ 239 (390)
+++++++.++++++ ++++.+.. .++.+.++|.+|......+...+.......+.|.|+++.+|.+ +.+.+.
T Consensus 175 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (352)
T PF07690_consen 175 PPPPRERESPKESE-------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGL 247 (352)
T ss_dssp -STTTT--SSTTTT---------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHH
T ss_pred cccccccccccccc-------cccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHH
Confidence 44433332222210 00000122 2566778887875666666666678889999999988889999 789999
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhc-CCchHHHHHHHHHHhhhcccccccc
Q 016374 240 FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH-VDSPAMAVLCMACSQGTDAFSQSGL 318 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (390)
......+...+++++.+++.||+++++.. .............+..... .+..+......+.+.+.+.......
T Consensus 248 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 321 (352)
T PF07690_consen 248 LFSIFGIVGIIGSLLAGRLSDRFGRRRRL------LIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILF 321 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCHHHH------HHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCcHHHH------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999876321 1112222222222211111 2233444455556665555555555
Q ss_pred chhccccCCCcchhHHHHHHHHHHHHHHHHH
Q 016374 319 YSNHQDIAPRYSGVLLGLSNTAGVLAGVFGT 349 (390)
Q Consensus 319 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~ 349 (390)
....+..|+|++|++.|+.+...++++.+||
T Consensus 322 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 322 SLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 5566667779999999999999999999987
No 40
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=1.2e-35 Score=274.73 Aligned_cols=368 Identities=13% Similarity=0.124 Sum_probs=269.9
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH-HHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLV-VRV 80 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~-~r~ 80 (390)
++.+|++.+++|.|+++.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.+++++++ +++.+++ .|+
T Consensus 39 ~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~ 116 (455)
T TIGR00892 39 TVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSS--NVIELYLTAGF 116 (455)
T ss_pred hhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhh--hHHHHHHHHHH
Confidence 4567889999999999999999999999999999999999999999999999999999999999998 8888765 579
Q ss_pred HHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhcc
Q 016374 81 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 160 (390)
Q Consensus 81 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 160 (390)
++|++.+...+...+++.++++ ++|+++.++.+.+..+|..++|++++.+.+.+|||+.|++.+++.++..+..++..+
T Consensus 117 l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~ 195 (455)
T TIGR00892 117 ITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRP 195 (455)
T ss_pred HHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999998777777888999995 899999999999999999999999999999999999999999887766554444443
Q ss_pred CCCCCCCCCch-hhh-h-h-hhhcc---cCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCc
Q 016374 161 SSPAEDPQLRP-AEK-K-L-IVSSC---ASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFN 233 (390)
Q Consensus 161 ~~~~~~~~~~~-~~~-~-~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 233 (390)
+++.++....+ ++. + . ..++. ...+...+....+++|+|+++......++..........++|.|.++ .|.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s 274 (455)
T TIGR00892 196 VGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVD 274 (455)
T ss_pred CCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCC
Confidence 32211100000 000 0 0 00000 00000001111247789999988888777777888888899999987 6999
Q ss_pred ccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc-hHHHHHHHHHHhhhcc
Q 016374 234 LTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDS-PAMAVLCMACSQGTDA 312 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 312 (390)
+.+++...+..+++.++++++.+++.||...++. +......+....+.........++ +.......+.+.+.+.
T Consensus 275 ~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-----~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~ 349 (455)
T TIGR00892 275 EYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPH-----VQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGS 349 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHH-----HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhch
Confidence 9999999999999999999999999997422110 111222222222222112222233 3334445555655554
Q ss_pred ccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CchhHHHHHHHHHHHHHHH
Q 016374 313 FSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG-SWDDVFKVSVGLYLVGTAV 378 (390)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~-g~~~~~~~~~~~~~~~~~~ 378 (390)
..........+..++++++++.|+.+...++|+.+||.+.|.+.|.. +|+..|++.+++.+++.+.
T Consensus 350 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 350 VGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 44444445556667789999999999999999999999999999985 6999998888777766553
No 41
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=7.4e-35 Score=266.43 Aligned_cols=349 Identities=18% Similarity=0.166 Sum_probs=249.8
Q ss_pred ccccc-cccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhh---hh---hhHHHH
Q 016374 3 IAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA---AK---LGLPFL 75 (390)
Q Consensus 3 ~~lp~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~---~~~~~l 75 (390)
+.+|. +++++|.|+.+.|++.+++.+++.+++++.|+++||+||||++..+.++.+++.+.+.++ ++ .+++.+
T Consensus 36 ~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 115 (399)
T PRK05122 36 AVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLL 115 (399)
T ss_pred HHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHH
Confidence 34565 678999999999999999999999999999999999999999999999888877665543 20 146678
Q ss_pred HHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHH
Q 016374 76 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 155 (390)
Q Consensus 76 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 155 (390)
++.|+++|++.+...+...+++.|+.|+|+|++++++...+..+|..+|+.+++.+.+++|||..+++..+..++.....
T Consensus 116 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 195 (399)
T PRK05122 116 LLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA 195 (399)
T ss_pred HHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999887766554433222
Q ss_pred HhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCccc
Q 016374 156 LSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT 235 (390)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 235 (390)
...|+++++ ++ + +.++++.+| +.+.......+..........+.|.|+++ .|.+
T Consensus 196 -~~~~~~~~~---~~--~---------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 249 (399)
T PRK05122 196 -RPRPAVPPV---KG--E---------------RLPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAA-RGWD-- 249 (399)
T ss_pred -hcCCCCCCC---Cc--c---------------chhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cccc--
Confidence 111221111 00 0 011222222 22222223334445566667788888876 4653
Q ss_pred chhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccc
Q 016374 236 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQ 315 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (390)
+.+.......++.+++++..+++.||+++|+... ............... ..+.+.......+.+.+.+...+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~G~~~~~~~~ 321 (399)
T PRK05122 250 GAALALTLFGVAFVGARLLFGNLINRLGGLRVAI-------VSLLVEILGLLLLWL-APSPWMALIGAALTGFGFSLVFP 321 (399)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH-------HHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhHHHHHH
Confidence 4556667788889999999999999999874321 111111111111111 22223333344445555554443
Q ss_pred cccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhcC
Q 016374 316 SGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTG 385 (390)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
.......++.++++|+++.|+.+....+|..++|.+.|.+.|+.||+..+++.+++.+++.+.....+++
T Consensus 322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 322 ALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3333445667778999999999999999999999999999999999999999988888887776655443
No 42
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=1.4e-34 Score=260.91 Aligned_cols=354 Identities=14% Similarity=0.111 Sum_probs=258.8
Q ss_pred ccccccccc-ccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhh-----hhhhHHHH
Q 016374 2 SIAILPMSA-EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA-----AKLGLPFL 75 (390)
Q Consensus 2 ~~~lp~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~l 75 (390)
++..+.+.+ |+|+|++|.+++.+++.+++.+..++.|++.||+|.|+++..+.++.++.++..+++ + |++.+
T Consensus 54 ~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~--s~~~l 131 (462)
T PRK15034 54 SAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNT--PFGIF 131 (462)
T ss_pred HHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCC--CHHHH
Confidence 455666665 899999999999999999999999999999999999999999999999999999987 6 89999
Q ss_pred HHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHh-----h-------------hcCC
Q 016374 76 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI-----H-------------RFGW 137 (390)
Q Consensus 76 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-----~-------------~~gw 137 (390)
++.|++.|++ +..++.....+++|+|+++||+++|+.....++|..+++++...+. + ..+|
T Consensus 132 li~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~ 210 (462)
T PRK15034 132 IVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSL 210 (462)
T ss_pred HHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHH
Confidence 9999999998 6688999999999999999999999998777777776666554433 2 2347
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHH
Q 016374 138 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFI 217 (390)
Q Consensus 138 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (390)
|.++++..++.++..++.++..++.+++ +.+ ..+..+.+|+|+.|...+.+++.+..+.+
T Consensus 211 ~~~~~~~~~~~iv~~i~~~~~~~~~~~~--~~~------------------~~~~~~vlk~~~~Wllslly~~tFG~fvg 270 (462)
T PRK15034 211 ANAAWIWVPLLAIATIAAWSGMNDIASS--RAS------------------IADQLPVLQRLHLWLLSLLYLATFGSFIG 270 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccc--ccC------------------HHHHHHHhCCCchhHHHHHHHHHHHHHHH
Confidence 7777788877777766666664443321 110 12344689999999999999999999999
Q ss_pred HhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH-HHHHHHhcC--
Q 016374 218 LLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA-FFLTQLSHV-- 294 (390)
Q Consensus 218 ~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-- 294 (390)
+..++|.|.++.+ +............+...+.++++|+++||+|+++...... ..+.... ......+..
T Consensus 271 ~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~------i~~~i~~~~~~l~lp~~~~ 342 (462)
T PRK15034 271 FSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINF------IFMAIFSALLFLTLPGTGS 342 (462)
T ss_pred HHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHH------HHHHHHHHHHHHHhccccc
Confidence 9999999998854 3333333344456788899999999999999996543321 1111111 111222211
Q ss_pred CchHHHHHHHHHHhhhccccccccchhccccCC----------------------CcchhHHHHHHHHHHHHHHHHHHHH
Q 016374 295 DSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP----------------------RYSGVLLGLSNTAGVLAGVFGTAAT 352 (390)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~g~~~~~~~~g~~ig~~i~ 352 (390)
.+.......++..+...+..+....-......| ++.|.+.|+......+|+.+-|.+.
T Consensus 343 ~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~ 422 (462)
T PRK15034 343 GNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAF 422 (462)
T ss_pred cHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHH
Confidence 122333332222222223333333322211112 2678899999999999999999999
Q ss_pred HHHHhc-CCchhHHHHHHHHHHHHHHHHHHhhcCC
Q 016374 353 GYILQH-GSWDDVFKVSVGLYLVGTAVWNLFSTGE 386 (390)
Q Consensus 353 g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (390)
|...+. .++...++...+..+++.++.+....++
T Consensus 423 g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r~ 457 (462)
T PRK15034 423 GMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRR 457 (462)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 998887 6789999999999999988887765443
No 43
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=1.4e-34 Score=263.92 Aligned_cols=347 Identities=15% Similarity=0.140 Sum_probs=245.2
Q ss_pred ccccc-cccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhh---h-----hhhhhHH
Q 016374 3 IAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP---V-----AAKLGLP 73 (390)
Q Consensus 3 ~~lp~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-----~~~~~~~ 73 (390)
+.+|. +++|+|.|++++|++.+++.+++.+++++.|+++||+||||++..+.+...++.+... . .+ |++
T Consensus 36 p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 113 (392)
T PRK12382 36 PVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPF--KFA 113 (392)
T ss_pred hhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhH--HHH
Confidence 34554 5789999999999999999999999999999999999999999998887776654322 1 24 788
Q ss_pred HHHHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHH
Q 016374 74 FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 153 (390)
Q Consensus 74 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~ 153 (390)
.++++|+++|++.+...+...+++.|++|+|+|++++++.+.+.+.|..++|++++.+.+++|||..+.+..+..++...
T Consensus 114 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 193 (392)
T PRK12382 114 LLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWA 193 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH
Confidence 99999999999999888888999999999999999999999999999999999999999999999987765544433322
Q ss_pred HHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCc
Q 016374 154 VWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFN 233 (390)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 233 (390)
.....||+++++ ++ +.+.++..| .++...+..++..........+.|.|+++ .+.+
T Consensus 194 -~~~~~~~~~~~~---~~-----------------~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~ 249 (392)
T PRK12382 194 -FNGTVRKVPAHA---GE-----------------RPSLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS-KGWA 249 (392)
T ss_pred -HHHhccCCCCCc---cc-----------------CchHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh-cCCc
Confidence 112222211110 00 001111111 11111122233344555667788888887 4655
Q ss_pred ccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccc
Q 016374 234 LTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAF 313 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (390)
. .+.......++.+++++..|++.||+++|+....+ ............. ..+.........+.+.+.+..
T Consensus 250 ~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~ 319 (392)
T PRK12382 250 M--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVS-------LLVETVGLLLLWL-APTAWVALAGAALTGAGCSLI 319 (392)
T ss_pred h--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHH-------HHHHHHHHHHHHH-cccHHHHHHHHHHHHHHHHhH
Confidence 3 45556667788889999999999999998654332 1111111111111 122223333344444444433
Q ss_pred cccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhcC
Q 016374 314 SQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTG 385 (390)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
.+.......++.++|+|+++.|+.++...+|+.++|.+.|.+.|+.||+..|.+.+.+.+++.+..+...++
T Consensus 320 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (392)
T PRK12382 320 FPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSFRR 391 (392)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhccC
Confidence 333333445667779999999999999999999999999999999999999999999888888776655443
No 44
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=6.6e-35 Score=265.09 Aligned_cols=351 Identities=13% Similarity=0.010 Sum_probs=257.8
Q ss_pred ccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhh
Q 016374 5 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGI 84 (390)
Q Consensus 5 lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 84 (390)
.+.+.+|++.++.+.+++.+.+.+++.+..++.|+++||+||||+++.+.++.+++.+.+.++. +. ++.|+++|+
T Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~--~~---~~~r~l~G~ 100 (393)
T PRK11195 26 AIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGI--HP---LLAYGLVGI 100 (393)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHH--HH---HHHHHHHHH
Confidence 4556789999999999999999999999999999999999999999999999999988888777 64 778999999
Q ss_pred ccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCCCC
Q 016374 85 GEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPA 164 (390)
Q Consensus 85 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 164 (390)
+.+...|+..+++.|++|+|+|++++++.+....+|..+||.+++.+.+. .|+..+.+.+...++.. +..+..||+++
T Consensus 101 ~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~-~~~~~l~~~~~ 178 (393)
T PRK11195 101 GAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAA-LFNLFIPRLGA 178 (393)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH-HHHhcCCCCcc
Confidence 99999999999999999999999999999999999999999999999985 47777776665544433 33445566543
Q ss_pred CCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHh
Q 016374 165 EDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLP 244 (390)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 244 (390)
++++.+++.++..+ + ....+++++|+|.+........+............|.|+++.+|.++.+.|......
T Consensus 179 ~~~~~~~~~~~~~~-~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~ 250 (393)
T PRK11195 179 RRPGQSWNPIALLR-D-------FFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVV 250 (393)
T ss_pred cccccCCCHHHHHH-H-------HHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHH
Confidence 32211111110000 0 012245677888877665555555556666777788899998999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchH-HHHHHHHHHhhhccccccccchhcc
Q 016374 245 WLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA-MAVLCMACSQGTDAFSQSGLYSNHQ 323 (390)
Q Consensus 245 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (390)
.++.+++++..+++.||.++++.... .. ... .........++.+ ......+.+.+.+....+..... +
T Consensus 251 ~~g~i~g~~~~~~l~~~~~~~~~~~~-------g~--~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~-q 319 (393)
T PRK11195 251 AIGIAVGAGAAARLVTLETVLRVLPA-------GI--LMG-LVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALL-Q 319 (393)
T ss_pred HHHHHHHHHHHHHHhcCCcccchHHH-------HH--HHH-HHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHH-H
Confidence 99999999999999998877743221 11 111 1111111122333 23334455555555554444444 4
Q ss_pred ccCCC-c-chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh
Q 016374 324 DIAPR-Y-SGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 324 ~~~~~-~-~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
+.+|+ . +|++.++.+..++++..++..+.+.+ +..|.+..+.+.+...+++..+.+.+
T Consensus 320 ~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 320 HRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred hhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45554 3 69999999999999999999999855 66788888888777777766655544
No 45
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=1.8e-34 Score=264.83 Aligned_cols=355 Identities=17% Similarity=0.152 Sum_probs=260.6
Q ss_pred ccccccccccCcCcch-----HHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 016374 3 IAILPMSAEFNWNPAT-----VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLV 77 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~-----~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 77 (390)
+.+|.+.+|+|.++.+ .|++.+.+.++..++.++.|+++||+|||+.+..+.+..+++.+++.+++ |++.+++
T Consensus 35 ~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 112 (408)
T PRK09874 35 PFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQ--NIWQFLI 112 (408)
T ss_pred hhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHh--hHHHHHH
Confidence 5678888999988655 48899999999999999999999999999999999999999999988888 8999999
Q ss_pred HHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHh
Q 016374 78 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 157 (390)
Q Consensus 78 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 157 (390)
.|++.|++.+ ..+....++.|+.|+++|++++++......+|..++|.+++.+.+..+||+.|++.+++.++..+....
T Consensus 113 ~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (408)
T PRK09874 113 LRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLF 191 (408)
T ss_pred HHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999865 567788899999999999999999999999999999999999999999999999998887777666666
Q ss_pred hccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHH-HHHHHHHHHHHHHhhchHHHHhHhcCCccc-
Q 016374 158 KAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALI-VSHFCHNWGTFILLTWMPTYYNQVLHFNLT- 235 (390)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~- 235 (390)
..||++++.++.++.+ ..+..+.+|+|+++... ...............+.+.|.++..+....
T Consensus 192 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (408)
T PRK09874 192 CIRENFQPVSKKEMLH---------------MREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNI 256 (408)
T ss_pred HhccCcccccchhhhH---------------HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHH
Confidence 6666543221111100 01122345677665433 333344445555667788888875332221
Q ss_pred --chhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhc-CCchHHHHHHHHHHhhhcc
Q 016374 236 --ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH-VDSPAMAVLCMACSQGTDA 312 (390)
Q Consensus 236 --~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 312 (390)
..+.+....+++.+++.+..|++.||+++|+.... . ............. .+.+.......+.+.+.+.
T Consensus 257 ~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 327 (408)
T PRK09874 257 AFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILIT-------A--LIFSVLLLIPMSFVQTPLQLGILRFLLGAADGA 327 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHH-------H--HHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHh
Confidence 23455566678888999999999999998854322 1 1111111111112 2223333344445555554
Q ss_pred ccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhc
Q 016374 313 FSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFST 384 (390)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 384 (390)
..+.......+..+++++|+.++..+....+|..+||.+.|.+.|..||+..|+..+++.+++.+......+
T Consensus 328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 328 LLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred hHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 443333344455666889999999999999999999999999999999999999999888888776655433
No 46
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=2.7e-34 Score=264.84 Aligned_cols=356 Identities=18% Similarity=0.194 Sum_probs=240.9
Q ss_pred ccccc--CcCcchHHHHH-----HHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHH-------
Q 016374 8 MSAEF--NWNPATVGLIQ-----SSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLP------- 73 (390)
Q Consensus 8 i~~~~--~~s~~~~g~~~-----s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~------- 73 (390)
+.+++ +.++. .+++. ++..++..+++++.|+++||+|||+++..+.++++++++++++++ |++
T Consensus 49 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 125 (438)
T PRK09952 49 FNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLP--SFSTIGWWAP 125 (438)
T ss_pred HHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCC--cHHHHHHHHH
Confidence 34454 56665 45554 345566779999999999999999999999999999999999999 776
Q ss_pred -HHHHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhh--------hcCChHHHHHH
Q 016374 74 -FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH--------RFGWPSVFYSF 144 (390)
Q Consensus 74 -~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--------~~gw~~~f~~~ 144 (390)
.++++|+++|++.|..++....++.|++|+|+|++..+..+.+..+|..++..+...+.. .+|||++|++.
T Consensus 126 ~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~ 205 (438)
T PRK09952 126 VLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFS 205 (438)
T ss_pred HHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHH
Confidence 588899999999999999999999999999999999999999999999999887776653 57999999988
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHH-HHHHHHHHHHHHhhchH
Q 016374 145 GSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIV-SHFCHNWGTFILLTWMP 223 (390)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 223 (390)
+++.++.. ......||+|+..++ +++. ++.+++ ....+.++|+|+.+.... ..++.....+....+.|
T Consensus 206 ~~~~l~~~-~l~~~~~es~~~~~~---~~~~-----~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (438)
T PRK09952 206 IVLVLIAL-WVRNGMEESAEFEQQ---QHEQ-----AAAKKR--IPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFAL 274 (438)
T ss_pred HHHHHHHH-HHHHhCCCChhHHHH---Hhhc-----cccccc--CCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77654432 222334444321111 0000 000001 112234667777665543 44555667777888999
Q ss_pred HHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Q 016374 224 TYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC 303 (390)
Q Consensus 224 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (390)
.|+++.+|.++..........+....++.++.|+++||++||+....+. ....+............+........
T Consensus 275 ~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (438)
T PRK09952 275 NYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGA-----LIGTLSAFPFFMALEAQSIFWIVFFS 349 (438)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH-----HHHHHHHHHHHHHHHcCChHHHHHHH
Confidence 9999888988776555555667778889999999999999985432210 11111111111111122223332222
Q ss_pred HHH-Hhhhccccccccchhc-cccCCCcchhHHHHHHHHH-HHHHHHHHHHHHHHHhc--CCchhHHHHHHHHHHHHHHH
Q 016374 304 MAC-SQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAG-VLAGVFGTAATGYILQH--GSWDDVFKVSVGLYLVGTAV 378 (390)
Q Consensus 304 ~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~-~~g~~ig~~i~g~l~~~--~g~~~~~~~~~~~~~~~~~~ 378 (390)
.++ +.+.+.. .+...... +..|++.|+++.|+.+... .+++.++|.+.+++.|. .+|...+....++.+++.+.
T Consensus 350 ~~l~~~~~~~~-~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~ 428 (438)
T PRK09952 350 IMLANIAHDMV-VCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMT 428 (438)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHH
Confidence 222 3333322 23333444 4455578999999966554 58999999999999885 35888888888888888777
Q ss_pred HHHhh
Q 016374 379 WNLFS 383 (390)
Q Consensus 379 ~~~~~ 383 (390)
.+..+
T Consensus 429 ~~~~~ 433 (438)
T PRK09952 429 ALLMK 433 (438)
T ss_pred HHHcc
Confidence 65553
No 47
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=8.3e-35 Score=272.71 Aligned_cols=375 Identities=18% Similarity=0.171 Sum_probs=257.3
Q ss_pred cccccccccccCcC--------cchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh-hhH
Q 016374 2 SIAILPMSAEFNWN--------PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK-LGL 72 (390)
Q Consensus 2 ~~~lp~i~~~~~~s--------~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~ 72 (390)
++.+|.+.++++.+ ..+.+++.+++.++..+++++.|+++||+|||+++..+.++..++.+++.+... .++
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (481)
T TIGR00879 48 GGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSV 127 (481)
T ss_pred hhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 34567777777766 899999999999999999999999999999999999999999999998865441 145
Q ss_pred HHHHHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhH---HHHhhhcCChHHHHHHHHHHH
Q 016374 73 PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS---PFLIHRFGWPSVFYSFGSLGT 149 (390)
Q Consensus 73 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~---~~l~~~~gw~~~f~~~~~~~~ 149 (390)
+.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.++ ....+..+||+.|++.++..+
T Consensus 128 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~ 207 (481)
T TIGR00879 128 EMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAG 207 (481)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999 666677899999999665555
Q ss_pred HHHHHHHhhccCCCCCC--CCCchhhhhhhhhcccCCCC--------------------CCcchhhhhhc------Cchh
Q 016374 150 VWFTVWLSKAHSSPAED--PQLRPAEKKLIVSSCASKEP--------------------VKTIPWGLILS------KPPV 201 (390)
Q Consensus 150 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~------~~~~ 201 (390)
+.. +...+.||+|+.. ++..++.++...+..+.+++ ..+..+++.++ .+.+
T Consensus 208 ~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (481)
T TIGR00879 208 LLF-LGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLF 286 (481)
T ss_pred HHH-HHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHH
Confidence 443 4445567765321 01111100000000000000 00011222222 1222
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Q 016374 202 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGF 281 (390)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 281 (390)
+...+..+...........+.|.+.++ .|++..+.+.......++.++++++.+++.||++||+....+ ...
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~-------~~~ 358 (481)
T TIGR00879 287 LGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIG-------AAG 358 (481)
T ss_pred HHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH-------HHH
Confidence 223333333333334455667777766 699988888888899999999999999999999998543321 111
Q ss_pred HHHHHHHHH---HhcCC------chHHHHHHHHHHhhhccccccccchhcccc-CCCcchhHHHHHHHHHHHHHHHHHHH
Q 016374 282 LGPAFFLTQ---LSHVD------SPAMAVLCMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAA 351 (390)
Q Consensus 282 ~~~~~~~~~---~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~ig~~i 351 (390)
......... ....+ .........+...+.+....+.......+. |+++|+++.|+.+...++|++++|.+
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~ 438 (481)
T TIGR00879 359 MAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFL 438 (481)
T ss_pred HHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111 11111 222233333333333433344444554444 55789999999999999999999999
Q ss_pred HHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhcC
Q 016374 352 TGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTG 385 (390)
Q Consensus 352 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
.+.+.++.+++..|++.+++++++.++..+..++
T Consensus 439 ~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 472 (481)
T TIGR00879 439 FPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPE 472 (481)
T ss_pred HHHHHHhcCccceehhHHHHHHHHHHHHheeccc
Confidence 9999999899999998888888877766555443
No 48
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=3.3e-35 Score=270.11 Aligned_cols=354 Identities=14% Similarity=0.072 Sum_probs=259.6
Q ss_pred ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhh-----hhhhhHHHHHH
Q 016374 3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV-----AAKLGLPFLLV 77 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~~~l~~ 77 (390)
+.+|.+.+|++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+..+.+++....+. .+ +++.+++
T Consensus 38 ~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~ 115 (417)
T PRK10489 38 VAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEP--SLLAIYL 115 (417)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCC--cHHHHHH
Confidence 4567788899999999999999999999999999999999999999998888887777665442 34 7888999
Q ss_pred HHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHh
Q 016374 78 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 157 (390)
Q Consensus 78 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 157 (390)
.|+++|++.+...+...+++.|+.|+++|+++.++.....++|..+||.+++.+.+..+||+.|++.++..++..+.. .
T Consensus 116 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~-~ 194 (417)
T PRK10489 116 LGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPL-L 194 (417)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH-H
Confidence 999999998888888899999999999999999999999999999999999999998999999998877766655443 3
Q ss_pred hccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccch
Q 016374 158 KAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTES 237 (390)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 237 (390)
..|++++++++.++.. +..+..++..+|+|.++...+..++.. .......+.|.|+++.+|.++.+.
T Consensus 195 ~l~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~g~~~~~~ 261 (417)
T PRK10489 195 RLPALPPPPQPREHPL------------RSLLAGFRFLLASPVVGGIALLGGLLT-MASAVRVLYPALADEVWQMGAAQI 261 (417)
T ss_pred hCCCCCCCCcccccch------------HHHHHHHHHHHcChHHHHHHHHHHHHH-HHHhHHHhhHHHHHhccCCChhHh
Confidence 4455433221111000 001223455778887766555544433 345677889999999889999999
Q ss_pred hhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHH-HHHHHHHHhhhcccccc
Q 016374 238 GLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM-AVLCMACSQGTDAFSQS 316 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 316 (390)
+.+.+...++.+++.++.+++.||.++++.. . .+.......+......++... .....+.+.+.+. ..+
T Consensus 262 g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~ 331 (417)
T PRK10489 262 GLLYAAVPLGAALGALTSGWLAHSARPGLLM-------L--LSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAI-SSL 331 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCcchHH-------H--HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH-HHH
Confidence 9999999999999999999999986555321 1 111122222222222333332 2333334443332 223
Q ss_pred ccchh-ccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh
Q 016374 317 GLYSN-HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 317 ~~~~~-~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
..... .+..|++.||+++|+.+...++|+.+||.+.|.+.|..|+...+...+.+..+..++....
T Consensus 332 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 332 LQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHh
Confidence 33334 4445567899999999999999999999999999999898888887776666655544443
No 49
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=1.1e-34 Score=267.53 Aligned_cols=339 Identities=14% Similarity=0.131 Sum_probs=227.9
Q ss_pred cccccccccccCcCcchHHHHH-HHHH-----HHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHH--
Q 016374 2 SIAILPMSAEFNWNPATVGLIQ-SSFF-----WGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLP-- 73 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~-s~~~-----~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~-- 73 (390)
++..|.+.+|++.++.+.+... +... +...+++++.|+++||+||||.++.+..+++++.+++++++ |++
T Consensus 35 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~--~~~~~ 112 (434)
T PRK15075 35 GFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVP--GYATI 112 (434)
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCC--cHHHH
Confidence 4567899999999888765443 3322 22346889999999999999999999999999999999999 766
Q ss_pred ------HHHHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHh--------hhcCChH
Q 016374 74 ------FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI--------HRFGWPS 139 (390)
Q Consensus 74 ------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--------~~~gw~~ 139 (390)
.++++|+++|++.+...+....+++|++|+|+|++++++.....++|..+++.+++.+. +.+|||+
T Consensus 113 ~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~ 192 (434)
T PRK15075 113 GLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRI 192 (434)
T ss_pred HHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHH
Confidence 46889999999999999999999999999999999999999998888888888877763 4689999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHH-HHHHHHHHHHHHHH
Q 016374 140 VFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWAL-IVSHFCHNWGTFIL 218 (390)
Q Consensus 140 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 218 (390)
+|++..+...+. .. .++.++++++. .+++ +++..+..+++..|+++.+.. ....+......+..
T Consensus 193 ~f~~~~~~~~~~-~~----~~~~~~e~~~~-~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (434)
T PRK15075 193 PFLIGCLIVPFI-FL----IRRSLEETEEF-LARK---------HRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLI 257 (434)
T ss_pred HHHHHHHHHHHH-HH----HHHhcCCCHHH-HHhh---------hccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 998754332211 11 12211111100 0000 001111223344555554433 33344455667778
Q ss_pred hhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchH
Q 016374 219 LTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA 298 (390)
Q Consensus 219 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (390)
..|.|.|+++.+|+++.+.+.......++.+++.++.|+++||++||+...... .................+...
T Consensus 258 ~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 332 (434)
T PRK15075 258 TVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFT-----VLAILTAYPALSWLVAAPSFA 332 (434)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH-----HHHHHHHHHHHHHHHcCCchH
Confidence 899999999988999998888888888999999999999999999985422210 011111111111111222222
Q ss_pred HH-HHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHH-HHHHHHHHHHHHHHhcCCch
Q 016374 299 MA-VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGV-LAGVFGTAATGYILQHGSWD 362 (390)
Q Consensus 299 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~g~~ig~~i~g~l~~~~g~~ 362 (390)
.. ....+.+.+.+...........+..|++.|+++.|+.+.... +++.++|.+.|++.|+.|+.
T Consensus 333 ~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 333 RMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 22 222222333332222222334556667899999999765555 46888999999999987753
No 50
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=3.8e-34 Score=261.87 Aligned_cols=338 Identities=16% Similarity=0.148 Sum_probs=254.4
Q ss_pred ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Q 016374 3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFM 82 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 82 (390)
+.+|++++|+|.|+++.++..+++.++..++++++|+++||+|||+.+..+..+..++.+++.+++ +++.+++.|+++
T Consensus 27 p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~ 104 (401)
T PRK11043 27 PAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE--SAAQLLVLRFVQ 104 (401)
T ss_pred hhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHH
Confidence 456788999999999999999999999999999999999999999999999999999999999998 999999999999
Q ss_pred hhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCC
Q 016374 83 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 162 (390)
Q Consensus 83 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (390)
|++.+...+...+++.|++|++++++..+.......+|..++|.+++.+.+++|||+.|++.+++.++..+..+.. +|+
T Consensus 105 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~ 183 (401)
T PRK11043 105 AVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRL-KPS 183 (401)
T ss_pred HhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 9998877888889999999999999999999999999999999999999999999999999888877766555444 333
Q ss_pred CCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhh
Q 016374 163 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV 242 (390)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 242 (390)
++++++ ++ ++.++++++|+|+++...+...........+..+.|.++++ .|.++.+.+....
T Consensus 184 ~~~~~~--~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~ 245 (401)
T PRK11043 184 KKARKQ--SQ---------------DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYV 245 (401)
T ss_pred CCcccc--ch---------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHH
Confidence 221110 00 12345678888888776666666666667777889999887 6999999998888
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHH-HHHHHHHhhhccccccccchh
Q 016374 243 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYSN 321 (390)
Q Consensus 243 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 321 (390)
...++.++++...+++.||+++|+..... ...................+..+.. ....+.+.+.+... +.....
T Consensus 246 ~~~~~~~~g~~~~~~l~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 320 (401)
T PRK11043 246 PQTIAFLVGGYGCRAALQKWGGEQLLPWL----LVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIY-PIVVAQ 320 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHH----HHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 88888999999999999999887533211 1111111111111111122233322 22333444444333 333333
Q ss_pred ccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHH
Q 016374 322 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFK 366 (390)
Q Consensus 322 ~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~ 366 (390)
..+..|++++++.|+.++.+..++..++.+.|.+.|.......+.
T Consensus 321 ~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~ 365 (401)
T PRK11043 321 ALRPFPQATGKAAALQNTLQLGLCFLASLLVSALISTPLLTTGSV 365 (401)
T ss_pred HhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHHHHH
Confidence 334456789999999999999999999999999988654444433
No 51
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=2.3e-34 Score=271.11 Aligned_cols=366 Identities=16% Similarity=0.109 Sum_probs=252.1
Q ss_pred ccccccccccCcC---cchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 016374 3 IAILPMSAEFNWN---PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 79 (390)
Q Consensus 3 ~~lp~i~~~~~~s---~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 79 (390)
+..|.+.+|+|++ +.+.++..+++.++..++.++.|+++||+|||++++.+.++.+++.++.++++ |++.+++.|
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSP--NYTVFLVFR 187 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcc--cHHHHHHHH
Confidence 4678899999999 89999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhc
Q 016374 80 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 159 (390)
Q Consensus 80 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 159 (390)
++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+.+ ||+.|++.+++.++..+.. ++.
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-Hhc
Confidence 999999999999999999999999999999999999999999999998876654 9999999988877766554 567
Q ss_pred cCCCCCCCCCch-hhh-hhh---hh---------------cccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHh
Q 016374 160 HSSPAEDPQLRP-AEK-KLI---VS---------------SCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL 219 (390)
Q Consensus 160 ~~~~~~~~~~~~-~~~-~~~---~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (390)
||+|+....+.+ ++. +.. .+ +.+.+++.++.++++++|+|+++...+......+......
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 343 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSY 343 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 887753211111 110 000 00 0000011113467788899988776666555444443333
Q ss_pred hchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Q 016374 220 TWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM 299 (390)
Q Consensus 220 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (390)
...+.+..+ .+.+. .......++..+++.++.+++.||+|||+... .....................+.
T Consensus 344 ~~~~~~~~~-~~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~-------~~~~~~~~~~l~~~~~~~~~~~~ 412 (505)
T TIGR00898 344 YGLVLDLGN-LGGNI---YLDLFISGLVELPAKLITLLLIDRLGRRYTMA-------ASLLLAGVALLLLLFVPVDLYFL 412 (505)
T ss_pred HHHhccccc-cCCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHH-------HHHHHHHHHHHHHHHcCCCchHH
Confidence 333333333 34443 23344556788899999999999999984322 11111111111122222222222
Q ss_pred HHHHHHHHhhhccccccccchhccccCC-CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 016374 300 AVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAV 378 (390)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 378 (390)
.....+++.+......+....+..|..| +.|+++.|+.++...+|+.++|.+.+ +.+ .++...+.+.+++.+++.+.
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~~~~~~~~~~~~~~~~~~~ 490 (505)
T TIGR00898 413 RTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE-KWLFLPLVLFGGLALLAGIL 490 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-HHHhhHHHHHHHHHHHHHHH
Confidence 2222222222222233344444445544 78999999999999999999999998 444 44556666666666666555
Q ss_pred HHHh-hcCCC
Q 016374 379 WNLF-STGEK 387 (390)
Q Consensus 379 ~~~~-~~~~~ 387 (390)
..++ +++++
T Consensus 491 ~~~lpet~~~ 500 (505)
T TIGR00898 491 TLFLPETKGV 500 (505)
T ss_pred HHcCcCCCCC
Confidence 4443 44433
No 52
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=2.4e-34 Score=264.19 Aligned_cols=350 Identities=13% Similarity=0.150 Sum_probs=253.4
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHh---hhhhhhhHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT---PVAAKLGLPFLLVV 78 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~~~l~~~ 78 (390)
++.+|++++++|+|+.+.|+..+.+.+++.+++++.|++.||+|||+++..+..+++++.+++ .+++ |++.++++
T Consensus 46 ~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~--~~~~ll~~ 123 (438)
T PRK10133 46 DILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIM--NYTLFLVG 123 (438)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcC--CHHHHHHH
Confidence 356789999999999999999999999999999999999999999999999999999999875 4677 89999999
Q ss_pred HHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhh------------------h------
Q 016374 79 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH------------------R------ 134 (390)
Q Consensus 79 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~------------------~------ 134 (390)
|+++|+|.+...+..++++.|+.|+++|.+.++..+..+.+|..+++.+++.+.. .
T Consensus 124 r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~ 203 (438)
T PRK10133 124 LFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHS 203 (438)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHH
Confidence 9999999999999999999998877777778999999999999999999876541 0
Q ss_pred --cCChHHHHHHHH-HHHHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHH
Q 016374 135 --FGWPSVFYSFGS-LGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCH 211 (390)
Q Consensus 135 --~gw~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (390)
.+||++|+.... ..++..++.....||.++++ +. + + ++.....++++++|+|+++...+..++.
T Consensus 204 ~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~-~~--~-~---------~~~~~~~~~~~ll~~~~~~~~~l~~~~~ 270 (438)
T PRK10133 204 LVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDN-HS--D-A---------KQGSFSASLSRLARIRHWRWAVLAQFCY 270 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc-cc--c-c---------cccchhhhHHHHHhCchHHHHHHHHHHH
Confidence 256667754333 33333222222233321111 00 0 0 0000122356788999988877777777
Q ss_pred HHHHHHHhhchHHHH-hHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHH
Q 016374 212 NWGTFILLTWMPTYY-NQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ 290 (390)
Q Consensus 212 ~~~~~~~~~~~~~~l-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (390)
.........|.+.|+ ++.+|.++.+++.......++.+++++..+++.||+++|+....+ ............
T Consensus 271 ~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~-------~~~~~~~~~~~~ 343 (438)
T PRK10133 271 VGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAY-------ALIAMALCLISA 343 (438)
T ss_pred HHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH-------HHHHHHHHHHHH
Confidence 777887888899885 566899999999999999999999999999999999998543221 111111111111
Q ss_pred HhcCCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHH
Q 016374 291 LSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDVFKVSV 369 (390)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g-~~~~~~~~~ 369 (390)
. . +.........+.+.+.+...+.. .....+..+++.+.+.++.. ....|+.++|.+.|.+.|..| .+..|++..
T Consensus 344 ~-~-~~~~~~~~~~l~glg~~~i~P~~-~s~a~~~~~~~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~ 419 (438)
T PRK10133 344 F-A-GGHVGLIALTLCSAFMSIQYPTI-FSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPA 419 (438)
T ss_pred H-c-CChHHHHHHHHHHHHHHHHHHHH-HHHHHcccchhhccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHH
Confidence 1 1 22233344455566666555444 44444445566778888876 455789999999999999877 778887655
Q ss_pred HHHHHHHH
Q 016374 370 GLYLVGTA 377 (390)
Q Consensus 370 ~~~~~~~~ 377 (390)
.+.+....
T Consensus 420 ~~~~~~~~ 427 (438)
T PRK10133 420 LCFAVIFI 427 (438)
T ss_pred HHHHHHHH
Confidence 55554443
No 53
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=5.8e-34 Score=259.85 Aligned_cols=339 Identities=17% Similarity=0.142 Sum_probs=246.6
Q ss_pred ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Q 016374 3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFM 82 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 82 (390)
+.+|.+.+|+|.|+.+.++..+.+.++..+++++.|+++||+|||+.+..+.++..++...+.+++ |++.+++.|+++
T Consensus 24 ~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~--~~~~~~~~~~l~ 101 (392)
T PRK10473 24 VGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAE--TSSLFLAGRFLQ 101 (392)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhC--cHHHHHHHHHHH
Confidence 568899999999999999999999999999999999999999999999999999999999999998 899999999999
Q ss_pred hhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCC
Q 016374 83 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 162 (390)
Q Consensus 83 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (390)
|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++..++.....||+
T Consensus 102 g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 181 (392)
T PRK10473 102 GIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKET 181 (392)
T ss_pred HhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999889999999999999999999999999999999999999999988889999999999888877766666666665
Q ss_pred CCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhh
Q 016374 163 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV 242 (390)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 242 (390)
++++++.+++ .....++.+|+|+++...+...+.......+..+.|.++++.+|+++.+.+....
T Consensus 182 ~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 246 (392)
T PRK10473 182 RPARAPAASS---------------KPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMA 246 (392)
T ss_pred CCcccCCccc---------------hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHH
Confidence 4332111100 0122345678888776665555555555566677888888888999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchhc
Q 016374 243 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNH 322 (390)
Q Consensus 243 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (390)
...++.+++++..+++.||+++|+.... .......+........ ..........+...+.+..... ...
T Consensus 247 ~~~~~~i~~~~~~~~l~~r~g~~~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~g~~~~~~~---~~~ 315 (392)
T PRK10473 247 LTAGVSMTVSFSTPFALGIFKPRTLMLT-------SQVLFLAAGITLALSP-SHAVSLFGITLICAGFSVGFGV---AMS 315 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHH-------HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHH---HHH
Confidence 9999999999999999999998843222 1111111111111111 1112222222222222221111 111
Q ss_pred cccCC-CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 016374 323 QDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLY 372 (390)
Q Consensus 323 ~~~~~-~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~ 372 (390)
.+..| ++++ |.......+++.+++.+.+++.++.|+.......+...
T Consensus 316 ~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 363 (392)
T PRK10473 316 QALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILI 363 (392)
T ss_pred HHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 22223 3332 33345556777888888888888877765444444434
No 54
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=2.1e-33 Score=256.39 Aligned_cols=335 Identities=16% Similarity=0.160 Sum_probs=255.6
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
.+.+|++.+|+|.|+.+.+++.+.+.++..++.++.|+++||+|||+++..+..+..++.+.+.+++ |++.+++.|++
T Consensus 28 ~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~ 105 (394)
T PRK11652 28 VPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAH--SLTVLIAASAI 105 (394)
T ss_pred hccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHH
Confidence 3567889999999999999999999999999999999999999999999999999999999999988 89999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
+|++.+...+....+..|.+++++|+++.+....+..++..++|.+++.+.+..|||+.|++.++..++.........||
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 185 (394)
T PRK11652 106 QGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPE 185 (394)
T ss_pred HHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99998888888888999999999999999999999999999999999999998999999999887776665555556666
Q ss_pred CCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhh
Q 016374 162 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 241 (390)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 241 (390)
+++++++++ + .+.++++.+|+|+++...+..+........+..+.+.++++.+|.++.+.+...
T Consensus 186 ~~~~~~~~~--~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 249 (394)
T PRK11652 186 TRPADARRT--R--------------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILF 249 (394)
T ss_pred cCccccchh--H--------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHH
Confidence 543221110 0 133456778888888766666666666666777888899998899999999888
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHH--hcCCc-hHHHHHHHHHHhhhcccccccc
Q 016374 242 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL--SHVDS-PAMAVLCMACSQGTDAFSQSGL 318 (390)
Q Consensus 242 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 318 (390)
....++.++++.+.+++.||.+++. ................. ..... +.......+.+.+.+.. .+..
T Consensus 250 ~~~~~~~~~g~~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~ 320 (394)
T PRK11652 250 ILPIPAAFFGAWFAGRPNKRFSTLM--------WQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGML-FPLA 320 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH-HHHH
Confidence 8888888899999999999988431 11111111111111111 11122 22333334444444433 3444
Q ss_pred chhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchh
Q 016374 319 YSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDD 363 (390)
Q Consensus 319 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~ 363 (390)
.....+..|++++++.++.+....+|+.+++.+.+.+.+...+..
T Consensus 321 ~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~ 365 (394)
T PRK11652 321 TSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQFSL 365 (394)
T ss_pred HHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHccCCchHHH
Confidence 444445557889999999999999999999999998876654443
No 55
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=7.2e-34 Score=258.91 Aligned_cols=349 Identities=13% Similarity=0.094 Sum_probs=252.7
Q ss_pred ccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhcc
Q 016374 7 PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGE 86 (390)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 86 (390)
.+++++|+|+.++|+..+.+.+...+.+++.|+++||+|||+++..+..+.+++.+.+.+++ +++.+++.|+++|++.
T Consensus 36 ~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~g~~~ 113 (400)
T PRK11646 36 RFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAH--EPWLLWLSCILSGLGG 113 (400)
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHH
Confidence 36788999999999999999999999999999999999999999999999999999999998 8999999999999999
Q ss_pred ccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 016374 87 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAED 166 (390)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (390)
+...+...+++.|++|+|+|++++++.....++|..+||.+++.+. .+|||+.|++.++..++..++.....||.++++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 192 (400)
T PRK11646 114 TLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLST 192 (400)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence 8888999999999999999999999999999999999999999998 679999999988777766555444544422110
Q ss_pred CCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHH
Q 016374 167 PQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWL 246 (390)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 246 (390)
.+++ .+.++++.+|+|+++...+..+...........+.|.|+++..+ ++.+.+.+.+...+
T Consensus 193 ---~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~ 254 (400)
T PRK11646 193 ---VRTP--------------VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAIEAC 254 (400)
T ss_pred ---cchh--------------hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHHHHH
Confidence 0000 12245677888888766655555444444556788999988644 77788888777777
Q ss_pred HHHHHHHHHHHHHHH-HHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchH-HHHHHHHHHhhhccccccccchhccc
Q 016374 247 TMAFSANLGGWIADT-LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA-MAVLCMACSQGTDAFSQSGLYSNHQD 324 (390)
Q Consensus 247 ~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (390)
....+....+++.|| ++.++. ...+. ...+.........++.. ......+.+.+.....+.......+.
T Consensus 255 ~~~~~~~~~~~~~~~r~~~~~~-------~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~ 325 (400)
T PRK11646 255 LSLTLLYPIARWSEKRFRLEHR-------LMAGL--LIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASL 325 (400)
T ss_pred HHHHHHHHHHHHHHHhcchhHH-------HHHHH--HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhc
Confidence 666666555666654 443321 21111 11112121222222222 22333334444443333333444455
Q ss_pred cCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcC---C-chhHHHHHHHHHHHHHHHHHHhhcC
Q 016374 325 IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG---S-WDDVFKVSVGLYLVGTAVWNLFSTG 385 (390)
Q Consensus 325 ~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~---g-~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
.|++++|++.|+.+....+|..+||.+.|.+.|+. + ....++..+++.+++.+......|+
T Consensus 326 ~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (400)
T PRK11646 326 ADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLALYWQFSQ 390 (400)
T ss_pred CCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHHhh
Confidence 67789999999999999999999999999999983 2 4566666666666665554443333
No 56
>PRK15011 sugar efflux transporter B; Provisional
Probab=100.00 E-value=1.7e-33 Score=256.42 Aligned_cols=343 Identities=17% Similarity=0.084 Sum_probs=235.8
Q ss_pred cccccCcCcchHHHHHHHHHH-HHHHHHHhhHHhhhhhhhHHHH-HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhc
Q 016374 8 MSAEFNWNPATVGLIQSSFFW-GYLLTQIAGGIWADTVGGKAVL-GFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIG 85 (390)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l-~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 85 (390)
+++|+|.|++++|++.+...+ +..++.++.++ +||+||||.+ ..+.+..+++..+.++++ +++.+++.+.+.|..
T Consensus 42 l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~ 118 (393)
T PRK15011 42 LTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNR--NYFVLLFVGVFLSSF 118 (393)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHH
Confidence 678999999999999877655 55555555555 9999999874 556666667777888888 888876665544444
Q ss_pred cccchhhhhHHhhhcccCCch--hHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCCC
Q 016374 86 EGVAMPAMNNILSKWVPVAER--SRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 163 (390)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (390)
.+...|...+++.|+.++++| +...+..+.+.++|.+++|++++.+.+++|||..|++.++..++..+..+...||++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 119 GSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 456788888888888766655 345688899999999999999999999999999999998888777666666677754
Q ss_pred CCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcC-chhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhh
Q 016374 164 AEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSK-PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV 242 (390)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 242 (390)
+++++.++ + .+. ..++ +..+...............+..+.|.|+++.+|.++.+.+.+..
T Consensus 199 ~~~~~~~~-~----------~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~ 259 (393)
T PRK15011 199 KELPLATG-T----------LEA--------PRRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMG 259 (393)
T ss_pred CCCccccc-c----------ccc--------cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 33221100 0 000 0112 22233333334444455566778999999888999999998888
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH-HHhhhccccccccchh
Q 016374 243 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMA-CSQGTDAFSQSGLYSN 321 (390)
Q Consensus 243 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 321 (390)
...++.+++.++.|+++||+++|+.... ............. ..++.+....... .+...+. ..+.....
T Consensus 260 ~~~~~~i~~~~~~G~l~dr~g~~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~l~~~~l~~~~~g~-~~~~~~~~ 329 (393)
T PRK15011 260 TAAGLEIPTMLIAGYFAKRLGKRFLMRV-------AAVAGVCFYAGML--MAHSPAILLGLQLLNAIYIGI-LGGIGMLY 329 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHH-------HHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 7778888999999999999999853221 1111111111111 1122222222222 1222111 11222334
Q ss_pred ccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh
Q 016374 322 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 322 ~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
..+..|++++++.++.+...++|..++|.+.|.+.|+.||+..+.+..++.+++.+..+..
T Consensus 330 ~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 330 FQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 4566677899999999999999999999999999999999999998888888877766554
No 57
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2.8e-34 Score=270.13 Aligned_cols=364 Identities=14% Similarity=0.116 Sum_probs=245.8
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
++.+|.+.+|+|.|+.+.+++.+.+.+++.++.++.|+++||+|||+.+..+.++.+++.++.++++ |++.+++.|++
T Consensus 40 ~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l 117 (496)
T PRK03893 40 TLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAP--GYWTLFIARLV 117 (496)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh--HHHHHHHHHHH
Confidence 3467889999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
.|++.+...+....++.|++|+|+|+++++....+.++|..+++.+++.+.++++||+.|++..+..++ .+......||
T Consensus 118 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~-~~~~~~~~p~ 196 (496)
T PRK03893 118 IGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIF-ALWLRKNLPE 196 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhCCC
Confidence 999999899999999999999999999999999999999999999999999999999999875443333 2233333444
Q ss_pred CCCCCCCCchhhh-hhhhhcccCCCCCCcchh----------hhhh-------------------------------cCc
Q 016374 162 SPAEDPQLRPAEK-KLIVSSCASKEPVKTIPW----------GLIL-------------------------------SKP 199 (390)
Q Consensus 162 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~~-------------------------------~~~ 199 (390)
+++.+++.+++++ ++..+....++.. .... ...+ +.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (496)
T PRK03893 197 AEDWKEKHAGKAPVRTMVDILYRGEHR-IINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWP 275 (496)
T ss_pred chhhhhhccccccchhHHHHHhcchhH-HHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchh
Confidence 3321111000000 0000000000000 0000 0000 000
Q ss_pred hhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 016374 200 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI 279 (390)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 279 (390)
.........+...........++|.|+++.+|.++.+.+.+.+...++.++++++.|++.||+++|+... ...
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~-------~~~ 348 (496)
T PRK03893 276 TGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYV-------CSL 348 (496)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH-------HHH
Confidence 0000001111111111234578899998778999999999999999999999999999999999884322 111
Q ss_pred HHHHHHHHHHHHhcCCchHHHHHH-HHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016374 280 GFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 358 (390)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~ 358 (390)
..................+..... ...+...............+..++++|++++|+.+....+|+.++|.+.|.+.|+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~ 428 (496)
T PRK03893 349 LISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQR 428 (496)
T ss_pred HHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc
Confidence 111111111111112222222222 2222222222222222334555668999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHH
Q 016374 359 GSWDDVFKVSVGLYLVGT 376 (390)
Q Consensus 359 ~g~~~~~~~~~~~~~~~~ 376 (390)
.|++..+...+.+..+..
T Consensus 429 ~g~~~~~~~~~~~~~~~~ 446 (496)
T PRK03893 429 LDLGTALASLSFSLTFVV 446 (496)
T ss_pred CChHHHHHHHHHHHHHHH
Confidence 999887766555444433
No 58
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.3e-33 Score=264.91 Aligned_cols=358 Identities=14% Similarity=0.153 Sum_probs=238.7
Q ss_pred CcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhh------HHHHHHHHHHHhhcc
Q 016374 13 NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLG------LPFLLVVRVFMGIGE 86 (390)
Q Consensus 13 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~ 86 (390)
+.++.+.+++.+.+.++..++.++.|+++||+|||+++..+.++..++.+++++++ + ++.++++|+++|++.
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~r~l~G~~~ 129 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSP--GSSPKSVMATLCFWRFWLGVGI 129 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcc--CcccchHHHHHHHHHHHHHHHH
Confidence 44566789999999999999999999999999999999999999999999988876 4 788999999999999
Q ss_pred ccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhh-----------------------hcCChHHHHH
Q 016374 87 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-----------------------RFGWPSVFYS 143 (390)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-----------------------~~gw~~~f~~ 143 (390)
+...+....++.|++|+++|++++++.+....+|..+++.++..+.. .++||+.|.+
T Consensus 130 g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~ 209 (502)
T TIGR00887 130 GGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGF 209 (502)
T ss_pred hhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHH
Confidence 99999999999999999999999999999999999999988876542 2479999988
Q ss_pred HHHHHHHHHHHHHhhccCCCCC---CCCCchhhhhhhh---h-----cccC------CCCCCcchhhhhhcC---chhH-
Q 016374 144 FGSLGTVWFTVWLSKAHSSPAE---DPQLRPAEKKLIV---S-----SCAS------KEPVKTIPWGLILSK---PPVW- 202 (390)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~-----~~~~------~~~~~~~~~~~~~~~---~~~~- 202 (390)
.++++++.. +..++.||+|+. +++.+++.++... + +.++ +++..+.++++++++ ++.+
T Consensus 210 ~~ip~~i~~-~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 288 (502)
T TIGR00887 210 GAVPALLAL-YFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGK 288 (502)
T ss_pred HHHHHHHHH-HHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHH
Confidence 777766554 445677999874 1121111111000 0 0000 000011346666653 2221
Q ss_pred ---HHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhh------------hhhHhHHHHHHHHHHHHHHHHHHHhcCC
Q 016374 203 ---ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGL------------FCVLPWLTMAFSANLGGWIADTLVSKGL 267 (390)
Q Consensus 203 ---~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 267 (390)
......+...+.+++...+.|.++++ .|+++.+.+. ......++.+++.++.+++.||+|||+.
T Consensus 289 ~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~ 367 (502)
T TIGR00887 289 HLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPI 367 (502)
T ss_pred HHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhH
Confidence 11223334445666777889999987 5887553321 1233445667788999999999999964
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchhccccCC-CcchhHHHHHHHHHHHHHH
Q 016374 268 SVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGV 346 (390)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~ 346 (390)
...+. ....++....+ ......+....................+....+..|..| +.|+++.|+.+....++++
T Consensus 368 l~~~~--~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~ 442 (502)
T TIGR00887 368 QLMGF--FILTVLFFVLG---FAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAI 442 (502)
T ss_pred HHHHH--HHHHHHHHHHH---HHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHH
Confidence 33221 11111111111 111111111111111121222222223334444455555 7899999999999999999
Q ss_pred HHHHHHHHHHhc----------CCchhHHHHHHHHHHHHHHHH
Q 016374 347 FGTAATGYILQH----------GSWDDVFKVSVGLYLVGTAVW 379 (390)
Q Consensus 347 ig~~i~g~l~~~----------~g~~~~~~~~~~~~~~~~~~~ 379 (390)
++|.+.+.+.|. .++...+.+.+++.+++.+..
T Consensus 443 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~ 485 (502)
T TIGR00887 443 IGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT 485 (502)
T ss_pred HHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh
Confidence 999999999884 244567777777777665544
No 59
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=100.00 E-value=9.1e-34 Score=255.09 Aligned_cols=328 Identities=12% Similarity=0.089 Sum_probs=243.7
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
++.+|++++|+|+|+++.+++.+.+.+++.++.++.|++.||+||||++..+.++..++.+.+ .++ +.+.+++.|++
T Consensus 20 ~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~--~~~~l~~~~~~ 96 (355)
T TIGR00896 20 GPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP--GTALLFAGTAL 96 (355)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc--cHHHHHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999888888877 677 88899999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhc--CChHHHHHHHHHHHHHHHHHHhhc
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF--GWPSVFYSFGSLGTVWFTVWLSKA 159 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--gw~~~f~~~~~~~~~~~~~~~~~~ 159 (390)
.|++.+...+....++.|++| ++|+++++..+.+.++|..+++.+++.+.++. +||+.|...++..++.... ..
T Consensus 97 ~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~---~~ 172 (355)
T TIGR00896 97 IGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLA---WI 172 (355)
T ss_pred HHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH---Hh
Confidence 999998888888888999885 78999999999999999999999999888765 3999988776654443222 22
Q ss_pred cCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhh
Q 016374 160 HSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGL 239 (390)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 239 (390)
|+.++++++.+ +.++.+.++.+|+|.++...+..++....+.....++|.|+++ .|.++.+.+.
T Consensus 173 ~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~ 236 (355)
T TIGR00896 173 PQVRRRVAANQ---------------TTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGS 236 (355)
T ss_pred hhhccccCCCC---------------CCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHH
Confidence 33222111100 0001223457788988877777777777888888999999988 6999999999
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccc
Q 016374 240 FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLY 319 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (390)
..+...++.+++++..|++.||+++|+.. ..........+.........+.. .....+.+.+.+...+....
T Consensus 237 ~~~~~~~~~i~~~~~~g~l~dr~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~g~~~g~~~~~~~~ 308 (355)
T TIGR00896 237 LLALMQLAQAASALLIPALARRVKDQRGI------VAVLAVLQLVGLCGLLFAPMHGL--WAWALVLGLGQGGAFPLALT 308 (355)
T ss_pred HHHHHHHHHHHHHHhHHHHHhhhccchHH------HHHHHHHHHHHHHHHHHhhhhHH--HHHHHHHHHhhhhHhHHHHH
Confidence 99999999999999999999999655321 11111111111111111111111 12334455555444333233
Q ss_pred hhccccC-CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 016374 320 SNHQDIA-PRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 360 (390)
Q Consensus 320 ~~~~~~~-~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g 360 (390)
...++.+ +++++...++.+...+++..++|.+.|.+.|+.|
T Consensus 309 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 309 LIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3333444 4677899999999999999999999999999854
No 60
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=4.3e-33 Score=250.43 Aligned_cols=329 Identities=29% Similarity=0.450 Sum_probs=275.5
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
++..|.+.+++|.++.+.++..+.+.++..++.++.|+++||+|||+.+..+..+..++.+...+.+ +++.+++.|++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 96 (352)
T cd06174 19 SPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFAS--SLWLLLVGRFL 96 (352)
T ss_pred HhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhc--cHHHHHHHHHH
Confidence 3556788899999999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
.|++.+...+...+++.|++|+|+|++.+++.+....+|..++|.+++.+.+..+||+.|++.++..++..+...+..
T Consensus 97 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 174 (352)
T cd06174 97 LGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL-- 174 (352)
T ss_pred HHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 999999999999999999999999999999999999999999999999999999999999998888777665544332
Q ss_pred CCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhh
Q 016374 162 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 241 (390)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 241 (390)
|+++...+..+...........+.|.+.++.+|.++.+.+...
T Consensus 175 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (352)
T cd06174 175 -------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLL 217 (352)
T ss_pred -------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 4566677777888888899999999999997799999999999
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHhcC-CchhHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHhhhccccccccc
Q 016374 242 VLPWLTMAFSANLGGWIADTLVSKG-LSVTTVRKIMQSIGFLGPAFFLTQLSHVD-SPAMAVLCMACSQGTDAFSQSGLY 319 (390)
Q Consensus 242 ~~~~~~~~~~~~~~g~l~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 319 (390)
....++..++.++.+++.||+++|+ ... .+..............+ .........+.+.+.+........
T Consensus 218 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 288 (352)
T cd06174 218 SLFGLGGILGALLGGLLSDRLGRRRLLLL---------IGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLT 288 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHH---------HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHH
Confidence 9999999999999999999999984 221 22222222222222223 333344455555655555544444
Q ss_pred hhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Q 016374 320 SNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN 380 (390)
Q Consensus 320 ~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 380 (390)
...+..++|+|++..|+.+....++..++|.+.|.+.|..+++..+.+.+++.+++.+...
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 289 LASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 5555556689999999999999999999999999999999999999999998888776654
No 61
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=3.2e-33 Score=253.58 Aligned_cols=343 Identities=10% Similarity=0.011 Sum_probs=254.3
Q ss_pred ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHH----HHHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 016374 3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVL----GFGVVWWSIATALTPVAAKLGLPFLLVV 78 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l----~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 78 (390)
+.+|.+.+|+|.|.+++|++.+.+.+...++++++|+++||+|||+.. ..+..+..+ ..+..++ +++.+++.
T Consensus 25 p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~--~~~~l~~~ 100 (382)
T TIGR00902 25 PFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAH--NAWLLFIA 100 (382)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhh--hHHHHHHH
Confidence 556788999999999999999999999999999999999999985433 222222222 2344667 89999999
Q ss_pred HHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhh
Q 016374 79 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 158 (390)
Q Consensus 79 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 158 (390)
|.++|.+.+...|...++..|+ +++|+++++......++|.+++|++++.+.+++|||..|.+......+. .....
T Consensus 101 ~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~-~~~~~- 176 (382)
T TIGR00902 101 IGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFM-LIGFL- 176 (382)
T ss_pred HHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHH-HHHHH-
Confidence 9999999888889888887664 5788999999999999999999999999999999999998876553322 23333
Q ss_pred ccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchh
Q 016374 159 AHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESG 238 (390)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 238 (390)
.+|+++++++.+++ ++.+..+.++++|+|+++...+..++.......+..+.|.|+++ .|.++.+.|
T Consensus 177 ~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g 243 (382)
T TIGR00902 177 IKPTIPPKDAIPED------------ESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATG 243 (382)
T ss_pred cCCCCCCCcccccc------------ccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHH
Confidence 33332111111000 00112346678999999999998888888999999999999988 799999999
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHH-HHHHHHHHhhhccccccc
Q 016374 239 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM-AVLCMACSQGTDAFSQSG 317 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 317 (390)
.......++.++.....+++.||+++|+. +..+.+............++.+. .....+.+...+......
T Consensus 244 ~l~~~~~~~~i~~~~~~~~l~~r~g~~~~---------l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~ 314 (382)
T TIGR00902 244 LLWGIGVLAEIIIFAFSNKLFQNCSARDL---------LLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAA 314 (382)
T ss_pred HHHHHHHHHHHHHHHHhHHHHhhCCHHHH---------HHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998832 22333333333333333444443 344455565555555444
Q ss_pred cchhccccCCCcchhHHHHHHH-HHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH
Q 016374 318 LYSNHQDIAPRYSGVLLGLSNT-AGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTA 377 (390)
Q Consensus 318 ~~~~~~~~~~~~~~~~~g~~~~-~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~ 377 (390)
..... +.|++++++..++++. ...+|..++|.+.|++.|+.|+ ..|...+.+.+++.+
T Consensus 315 ~~~i~-~~~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 315 MRYIA-AQPGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHHH-hCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 43444 4477788999999874 5678999999999999999886 667777777766543
No 62
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=2.5e-33 Score=254.89 Aligned_cols=348 Identities=9% Similarity=0.054 Sum_probs=255.3
Q ss_pred cccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhc
Q 016374 6 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIG 85 (390)
Q Consensus 6 p~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 85 (390)
+.+++++|+|+.++|+..+.+.++..+++++.|+++||+|||+++..+.++.+++.+..++++ |++.++++|.+.|.+
T Consensus 32 ~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~ 109 (395)
T PRK10054 32 IYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVN--NVTLVVLFFALINCA 109 (395)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHH
Confidence 346688999999999999999999999999999999999999999999999999999999999 888898899998888
Q ss_pred cccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 016374 86 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAE 165 (390)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 165 (390)
.+...+...++..|..|+++|++++++.....++|..++|.+++.+.+ .+||..|++.++..++..++.....||++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~ 188 (395)
T PRK10054 110 YSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKA 188 (395)
T ss_pred HHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 777788889999999999999999999999999999999999999876 7999999988877777655555544443322
Q ss_pred CCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHh--cCCcccchhhhhhH
Q 016374 166 DPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV--LHFNLTESGLFCVL 243 (390)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~~~~~~~~~~~~ 243 (390)
+++++ ++ ..+.++.+|+|+++...+..++..+.......+.+.|..+. .+.++...+.....
T Consensus 189 ~~~~~--~~--------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 252 (395)
T PRK10054 189 IATET--GS--------------VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPV 252 (395)
T ss_pred cccch--hh--------------hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHh
Confidence 11100 00 11124678899998888887777777776767777777543 34555666777777
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchhcc
Q 016374 244 PWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQ 323 (390)
Q Consensus 244 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (390)
..+.....+...+++.||.++|+... ..................+.+...+.....+.+.....+.......+
T Consensus 253 ~~~~~~~~~~~~g~~~~~~~~~~~l~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~ 325 (395)
T PRK10054 253 NAAMVVSLQYSVGRRLNAANIRPLMT-------AGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDH 325 (395)
T ss_pred hhhheeeehhHHHHHHccCCchhHHH-------HHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 77777777888899999998884322 11111111111111111122223334444455544333333334445
Q ss_pred ccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Q 016374 324 DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN 380 (390)
Q Consensus 324 ~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 380 (390)
..|++.+++..+..+ ...+|..+||.+.|.+.|+.|+...+++.+.+..++.++..
T Consensus 326 ~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 326 IAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred hCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 556688999988754 67789999999999999999998888887666665555443
No 63
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=7.1e-34 Score=260.01 Aligned_cols=342 Identities=21% Similarity=0.292 Sum_probs=251.2
Q ss_pred ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Q 016374 3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFM 82 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 82 (390)
+..|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||+.+..+.++.+++.++..+++ +++.+++.|++.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 115 (398)
T TIGR00895 38 FAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALAT--NVTQLLILRFLA 115 (398)
T ss_pred hhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHcc--chHHHHHHHHHH
Confidence 457888999999999999999999999999999999999999999999999999999999999998 899999999999
Q ss_pred hhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCC
Q 016374 83 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 162 (390)
Q Consensus 83 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (390)
|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..|||+.|++.+++..+...+.....||+
T Consensus 116 g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (398)
T TIGR00895 116 GLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPES 195 (398)
T ss_pred hcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999998777766666666667776
Q ss_pred CCCCCCCchhhhhh----hhhc----c---cCCC----CCCcchhhhhhcC---chhHHHHHHHHHHHHHHHHHhhchHH
Q 016374 163 PAEDPQLRPAEKKL----IVSS----C---ASKE----PVKTIPWGLILSK---PPVWALIVSHFCHNWGTFILLTWMPT 224 (390)
Q Consensus 163 ~~~~~~~~~~~~~~----~~~~----~---~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (390)
++...++++++..+ ..++ . .+++ +..+...+.++++ +..+...+..++..........+.|.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (398)
T TIGR00895 196 IDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPK 275 (398)
T ss_pred ChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54221111111100 0000 0 0000 0011112222322 23344444555566667777888885
Q ss_pred HHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 016374 225 YYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCM 304 (390)
Q Consensus 225 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (390)
+.++ .|.++.+.+.......++.++++++.+++.||+++|+. .............+ .....+.........
T Consensus 276 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 346 (398)
T TIGR00895 276 LMVE-LGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVT-------ALLLLLGAVFAVLV-GSTLFSPTLLLLLGA 346 (398)
T ss_pred HHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHH-------HHHHHHHHHHHHHH-HHHhhCHHHHHHHHH
Confidence 5544 79999999999999999999999999999999998721 11111111111111 111223333444455
Q ss_pred HHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 016374 305 ACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYI 355 (390)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l 355 (390)
+.+.+.+...........+..++++|+++.|+.+....+|..++|.+.|++
T Consensus 347 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 347 IAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 555555555444444455556668999999999999999999999999875
No 64
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=100.00 E-value=1.3e-33 Score=255.43 Aligned_cols=331 Identities=16% Similarity=0.173 Sum_probs=238.6
Q ss_pred cccccc-cccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Q 016374 2 SIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 80 (390)
Q Consensus 2 ~~~lp~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 80 (390)
++.+|+ +++++|+|+.+.+++.+.+.+++.+++++.|+++||+|||+.+..+.++..++.++++++++ +++.+++.|+
T Consensus 21 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~ 99 (366)
T TIGR00886 21 SPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQ-SYSVLLLLRL 99 (366)
T ss_pred HHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHH
Confidence 456785 89999999999999999999999999999999999999999999999999999999888763 5788999999
Q ss_pred HHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhh----------hcCChHHH-HHHHHHHH
Q 016374 81 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH----------RFGWPSVF-YSFGSLGT 149 (390)
Q Consensus 81 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----------~~gw~~~f-~~~~~~~~ 149 (390)
++|++.+ ..+...+++.|++|+|+|++++++.....++|..+++.+++.+.+ +.+||+.| ...+++..
T Consensus 100 ~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 178 (366)
T TIGR00886 100 FIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILL 178 (366)
T ss_pred HHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHH
Confidence 9999865 456678999999999999999999998888888888888776654 24899999 44455555
Q ss_pred HHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHh
Q 016374 150 VWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV 229 (390)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 229 (390)
+..++.....+|+|+++++.++.+.+ ++....+++...+.++.+++|+++...+..++..........+.|.|+++.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (366)
T TIGR00886 179 LPALLIFFVGADTPPGKPATGKLSFK---GARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQ 255 (366)
T ss_pred HHHHHHHHhcccCCcccccchhcccc---cccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55455555556655432211111100 000000111112456678899998888887777777888899999999998
Q ss_pred cCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCC--chHHHHHHHHHH
Q 016374 230 LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD--SPAMAVLCMACS 307 (390)
Q Consensus 230 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 307 (390)
+|.++.+++.+.....+..++++++.+++.||+++|+... ...........+......+ +...........
T Consensus 256 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (366)
T TIGR00886 256 FGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLL-------MSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVAL 328 (366)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHH-------HHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHH
Confidence 9999999999889999999999999999999999985322 2222222222222222221 333222222222
Q ss_pred hhhccccccccchhccccCCCcchhHHHHHHHHHHHH
Q 016374 308 QGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLA 344 (390)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 344 (390)
....+...........+..|+++|+++|+.+...++|
T Consensus 329 ~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 329 FFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHhccccchhhhcchhhchhhcccHHHHHHHhccCC
Confidence 2222233344445555667789999999999888765
No 65
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=100.00 E-value=5.1e-33 Score=253.28 Aligned_cols=348 Identities=15% Similarity=0.143 Sum_probs=251.4
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-hhhHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA-KLGLPFLLVVRV 80 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~ 80 (390)
++.+|++++++|.|+.+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++.+++..+. ..|++.+++.|+
T Consensus 23 ~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~ 102 (410)
T TIGR00885 23 NPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLF 102 (410)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999999999999999998865432 117899999999
Q ss_pred HHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhh--------------------------h
Q 016374 81 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH--------------------------R 134 (390)
Q Consensus 81 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--------------------------~ 134 (390)
+.|+|.+...+..++++.+..|+++|++.+++.+...++|..++|.+++.+.. .
T Consensus 103 l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (410)
T TIGR00885 103 ILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDL 182 (410)
T ss_pred HHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987742 2
Q ss_pred cCChHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHH
Q 016374 135 FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWG 214 (390)
Q Consensus 135 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (390)
.+||++|++.+++.++..++..+. +. |+.++++ +++ +....+.++++|+|+++...+..++....
T Consensus 183 ~~w~~~fl~~a~~~~~~~~~~~~~-~~-p~~~~~~--~~~-----------~~~~~~~~~~~~~~~~~~~~l~~f~yvg~ 247 (410)
T TIGR00885 183 ASVQTPYMIIGAVVLAVALLIMLT-KM-PALNHSD--AKQ-----------ISFSASLSRLARIRHYREGVIAQFFYVGV 247 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-cC-CCCCccc--ccc-----------ccchhhHHHHHhChhHHHHHHHHHHHHHH
Confidence 469999998888777654443322 21 1111100 000 00112345678999999888888888888
Q ss_pred HHHHhhchHHHHhHhc-CCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhc
Q 016374 215 TFILLTWMPTYYNQVL-HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH 293 (390)
Q Consensus 215 ~~~~~~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (390)
+....++++.|.++.. +.+....+...+....+..+|+++++++.||+++|+.. ..+.............
T Consensus 248 e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l---------~i~~~~~~~~~ll~~~ 318 (410)
T TIGR00885 248 QIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVL---------MAYAIIGMALCLGSIF 318 (410)
T ss_pred HHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH---------HHHHHHHHHHHHHHHH
Confidence 8888899999998732 33334445556666678899999999999999888421 1222222222222222
Q ss_pred CCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcC------CchhHHHH
Q 016374 294 VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG------SWDDVFKV 367 (390)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~------g~~~~~~~ 367 (390)
.+.........+.+.+.....+.......+..+++.+..+.++... .+|+++.|++.|.+.|.. +++..|++
T Consensus 319 ~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~ 396 (410)
T TIGR00885 319 AGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFIL 396 (410)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHH
Confidence 3333445555566666665554444444444444444334444443 399999999999999953 57788887
Q ss_pred HHHHHHHH
Q 016374 368 SVGLYLVG 375 (390)
Q Consensus 368 ~~~~~~~~ 375 (390)
...+.+..
T Consensus 397 ~~~~~~~~ 404 (410)
T TIGR00885 397 PLLCFAVI 404 (410)
T ss_pred HHHHHHHH
Confidence 66555543
No 66
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=2.2e-33 Score=256.44 Aligned_cols=346 Identities=17% Similarity=0.170 Sum_probs=243.3
Q ss_pred cccccccC--cCcchHHHHHHH-----HHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHH-----
Q 016374 6 LPMSAEFN--WNPATVGLIQSS-----FFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLP----- 73 (390)
Q Consensus 6 p~i~~~~~--~s~~~~g~~~s~-----~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~----- 73 (390)
+.+.+++. .++++.+...+. ..++..+++++.|+++||+|||+++..+.++..++.+++++++ +++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~ 94 (394)
T TIGR00883 17 VLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLP--SYATIGIW 94 (394)
T ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCC--ChhhhHHH
Confidence 44445533 456666665553 3333346889999999999999999999999999999999998 664
Q ss_pred ---HHHHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHh--------hhcCChHHHH
Q 016374 74 ---FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI--------HRFGWPSVFY 142 (390)
Q Consensus 74 ---~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--------~~~gw~~~f~ 142 (390)
.+++.|+++|++.+...+...+++.|++|+|+|++..+....+..+|..+++.++..+. +.++||+.|+
T Consensus 95 ~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~ 174 (394)
T TIGR00883 95 APILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFL 174 (394)
T ss_pred HHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHH
Confidence 47889999999999999999999999999999999999999999999999998877664 3578999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCch--hHHHHHHHHHHHHHHHHHhh
Q 016374 143 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPP--VWALIVSHFCHNWGTFILLT 220 (390)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 220 (390)
+.+++.++... .....+|+++.+++ ++ +++..+.+.++.+++++ ++......+...........
T Consensus 175 ~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (394)
T TIGR00883 175 VSAVLVLIGLY-LRRNLEETPVFEKA-----QE--------KHKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITT 240 (394)
T ss_pred HHHHHHHHHHH-HHHhcCCChhHHHH-----Hh--------ccccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 87766655433 22333443321110 00 00111234455666655 67777777777777888889
Q ss_pred chHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH-HHHHHHhcCCchHH
Q 016374 221 WMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA-FFLTQLSHVDSPAM 299 (390)
Q Consensus 221 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 299 (390)
+.|.|+++.+|.++.+.+.......+...+++++.+++.||++||+.... ......... .........++.+.
T Consensus 241 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 314 (394)
T TIGR00883 241 YLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLII------FTVLAALLAVPLLMALLDSGSFTL 314 (394)
T ss_pred HHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH------HHHHHHHHHHHHHHHHhcCCchHH
Confidence 99999988889999999999999999999999999999999998853221 111111111 11111222223333
Q ss_pred -HHHHHHHHhhhccccccccchhccccCCCcchhHHHHH-HHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHHH
Q 016374 300 -AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLS-NTAGVLAGVFGTAATGYILQHGS-WDDVFKVSVGLYL 373 (390)
Q Consensus 300 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g~~ig~~i~g~l~~~~g-~~~~~~~~~~~~~ 373 (390)
.....+.+.+.+....+......+..|+++|+++.++. +....+|..++|.+.|.+.|+.| ++..++....+.+
T Consensus 315 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 315 FFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 33334444444444444444445556668899999985 45566788999999999999977 7766666555444
No 67
>PRK11010 ampG muropeptide transporter; Validated
Probab=100.00 E-value=3.9e-32 Score=253.01 Aligned_cols=360 Identities=14% Similarity=0.114 Sum_probs=258.4
Q ss_pred ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhh-----hhHHH-HHHHHHHHHHHHHHhhhhhh-hhHHHH
Q 016374 3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-----GGKAV-LGFGVVWWSIATALTPVAAK-LGLPFL 75 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~~~-~~~~~l 75 (390)
..+|...++.|.|.++++.+ +.....+ ++.+++|+++||+ ||||. +..+.+..+++...+++.+. .+++.+
T Consensus 33 ~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l 110 (491)
T PRK11010 33 GTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWL 110 (491)
T ss_pred HHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHH
Confidence 34677778889999999997 4444444 5899999999999 99886 66777888788777777531 267888
Q ss_pred HHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhh-hcCChHHHHHHHHHHHHHHHH
Q 016374 76 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGWPSVFYSFGSLGTVWFTV 154 (390)
Q Consensus 76 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~gw~~~f~~~~~~~~~~~~~ 154 (390)
.+.+++.|++.+...+...+++.|++|+|||+++.++...+..+|.++++.++.++.+ ..|||..|++.+++.++..+.
T Consensus 111 ~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~ 190 (491)
T PRK11010 111 AALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIA 190 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998 579999999998887776544
Q ss_pred HHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcc
Q 016374 155 WLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNL 234 (390)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 234 (390)
.+ ..||+++++++ +++.+ +....++++.+++++.+...+..++..........+.+.|+.+..|+++
T Consensus 191 ~~-~~~e~~~~~~~-~~~~~-----------~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~ 257 (491)
T PRK11010 191 TL-LAPEPTDTIPV-PKTLE-----------QAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDA 257 (491)
T ss_pred HH-hcCCCcccccc-ccchh-----------hhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 44 35664332111 00000 0012346677888887776666666666666777788889877789999
Q ss_pred cchhhhhh-HhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHh-cCCchHHHH-HHHHHHhhhc
Q 016374 235 TESGLFCV-LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS-HVDSPAMAV-LCMACSQGTD 311 (390)
Q Consensus 235 ~~~~~~~~-~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~ 311 (390)
.+.+.... ...++.+++.++.|++.||+++|+.... ...........+.... ..++..... ...+.....+
T Consensus 258 ~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i------~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g 331 (491)
T PRK11010 258 GEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMI------FGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGG 331 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence 99999874 5567999999999999999998743211 1111111111111111 122322222 2222111111
Q ss_pred cccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhh
Q 016374 312 AFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS 383 (390)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
...........+..+++.+++..|+.+....+|..+++.+.|.+.|..||+..|.+.+++.+.+.+.....+
T Consensus 332 ~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 332 MGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 111222233334455678899999999999999999999999999999999999999999998877776654
No 68
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=100.00 E-value=3.4e-32 Score=246.98 Aligned_cols=344 Identities=12% Similarity=0.074 Sum_probs=245.6
Q ss_pred ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhH----HHHHHHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 016374 3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK----AVLGFGVVWWSIATALTPVAAKLGLPFLLVV 78 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr----~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 78 (390)
+.+|.+.+|+|.|..++|++.+++.++..+++++.|++.||+||| +.+.+...+. .......++ |++.+++.
T Consensus 25 p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~l~i~ 100 (382)
T PRK11128 25 PFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAH--SFWLLFVA 100 (382)
T ss_pred hhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcc--cHHHHHHH
Confidence 566788899999999999999999999999999999999999984 3333222222 222333456 89999999
Q ss_pred HHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhh
Q 016374 79 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 158 (390)
Q Consensus 79 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 158 (390)
|++.|++.+...+...+++.++ +++|+++++......++|..+||++++++.+++|||..|++.++..++..+ ....
T Consensus 101 ~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~-~~~~ 177 (382)
T PRK11128 101 IGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLL-GQLL 177 (382)
T ss_pred HHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHc
Confidence 9999999888889888887776 466888889999999999999999999999999999999887765444433 2333
Q ss_pred ccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchh
Q 016374 159 AHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESG 238 (390)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 238 (390)
.||+++++++ +++ .+ +...++++++|+|+++...+..++..........+.|.|++| .|.++.+.+
T Consensus 178 ~~~~~~~~~~----~~~-------~~--~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g 243 (382)
T PRK11128 178 RPTIMPQGES----RQQ-------ES--AGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIG 243 (382)
T ss_pred cCCCCCcccc----ccc-------cc--cccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHH
Confidence 3432211110 000 00 113457789999999988888787777777788888999977 799999999
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHH-HHHHHHHHhhhccccccc
Q 016374 239 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM-AVLCMACSQGTDAFSQSG 317 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 317 (390)
.+.....+..++...+.+++.||+++|+. +..+....+.........++.+. .....+.+...+.. .+.
T Consensus 244 ~~~~~~~~~~~~~~~~~g~l~~r~~~~~~---------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~-~~~ 313 (382)
T PRK11128 244 YLWSLGVVAEVLIFAFSNRLFRRWSARDL---------LLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVC-HLA 313 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHH---------HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH-HHH
Confidence 99998889999999999999999998843 22222222222222223334443 33344444444433 333
Q ss_pred cchhccccCCCcchhHHHHHH-HHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 016374 318 LYSNHQDIAPRYSGVLLGLSN-TAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAV 378 (390)
Q Consensus 318 ~~~~~~~~~~~~~~~~~g~~~-~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 378 (390)
...+..+.+++++++..+..+ .....|..+||.+.|.+.|+.|+ ..++..+++.+++..+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 314 AMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 444444456667788899887 44567779999999999999876 4666666655554433
No 69
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.3e-34 Score=248.32 Aligned_cols=352 Identities=16% Similarity=0.190 Sum_probs=266.6
Q ss_pred cccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHh
Q 016374 4 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMG 83 (390)
Q Consensus 4 ~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 83 (390)
..+++++.+|+++++.|++++.+.+.+.+++|+.|+++|||+||+++..|..++.++.+.++++. .+|+++++|.+.|
T Consensus 55 v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~--~Fwq~~l~R~~vG 132 (493)
T KOG1330|consen 55 VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSN--HFWQVLLCRGFVG 132 (493)
T ss_pred hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHH--HHHHHHHHHHHhc
Confidence 46778899999999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred hccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcC-ChHHHHHHHHHHHHHHHHHHhhccCC
Q 016374 84 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVWLSKAHSS 162 (390)
Q Consensus 84 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (390)
+|.+...|.++++++|.+|.++|++.+++++.+..+|..+|.+.+..+.+..+ |||.|++.++++++..++.+++.+|+
T Consensus 133 iGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP 212 (493)
T KOG1330|consen 133 IGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREP 212 (493)
T ss_pred cchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCc
Confidence 99999999999999999999999999999999999999999999999988766 99999999999999999999888886
Q ss_pred CCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHh---cCCcccchhh
Q 016374 163 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV---LHFNLTESGL 239 (390)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~g~~~~~~~~ 239 (390)
++...++.+.+.+. .........+.+.+.|+|.+....+......+....+..|.|.+.+.. .|++..+.-.
T Consensus 213 ~rga~~~~~~~~~~-----~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~i 287 (493)
T KOG1330|consen 213 ERGARDEVDGENKM-----VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLI 287 (493)
T ss_pred ccccccccccCCcC-----CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchh
Confidence 65422221111110 011112234566677778888888888888888888888888766643 4556666667
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHhc--CCchHHHHHHHHHHhhhccccc
Q 016374 240 FCVLPWLTMAFSANLGGWIADTLVSKGLSV--TTVRKIMQSIGFLGPAFFLTQLSH--VDSPAMAVLCMACSQGTDAFSQ 315 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 315 (390)
+..+...++.+|.+.+|.++||+.++.... ..........+......++..... ....+..+.+++++.......+
T Consensus 288 fg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~ 367 (493)
T KOG1330|consen 288 FGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNW 367 (493)
T ss_pred hhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccc
Confidence 777788899999999999999966532221 111122333333333333333222 2334444555555555444444
Q ss_pred cc-cchhccccCCCcchhHHHHHHHHHHH-HHHHHHHHHHHHHhc-CCch
Q 016374 316 SG-LYSNHQDIAPRYSGVLLGLSNTAGVL-AGVFGTAATGYILQH-GSWD 362 (390)
Q Consensus 316 ~~-~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~ig~~i~g~l~~~-~g~~ 362 (390)
.. .....+.++|+.|.++.++-..+..+ |.+-+|.+.|.+.|+ .||+
T Consensus 368 a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 368 ATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred ccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 33 34455667889999999997776655 556666699999998 5555
No 70
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=100.00 E-value=1.1e-30 Score=238.66 Aligned_cols=358 Identities=15% Similarity=0.087 Sum_probs=247.5
Q ss_pred ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhh-----hhHH-HHHHHHHHHHHHHHHhhhhhh-hhHHHH
Q 016374 3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-----GGKA-VLGFGVVWWSIATALTPVAAK-LGLPFL 75 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~-~l~~~~~~~~~~~~~~~~~~~-~~~~~l 75 (390)
..+|.+-+|.|+|.+++|++..+... .+..+++|+++||+ |||| .+..+..+.+++....++.+. .+++.+
T Consensus 20 ~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l 97 (402)
T PRK11902 20 GTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPL 97 (402)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHH
Confidence 35677888899999999999776665 58999999999999 8775 688888888888888777631 257778
Q ss_pred HHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhh-cCChHHHHHHHHHHHHHHHH
Q 016374 76 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTV 154 (390)
Q Consensus 76 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~~~f~~~~~~~~~~~~~ 154 (390)
++..++.+...+...++..+++.|+.|+|||+++.++...+.++|..+++.++..+.+. .|||..|++.++..++....
T Consensus 98 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 98 AGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 88888888888888999999999999999999999999999999999999999999885 59999999988877665443
Q ss_pred HHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcc
Q 016374 155 WLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNL 234 (390)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 234 (390)
....||+++++++.+ +.++ +.+.++++++|||.++...+..++..........+.+.++.+..|.++
T Consensus 178 -~~~~~e~~~~~~~~~-~~~~-----------~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~ 244 (402)
T PRK11902 178 -TLWAPEPEVPARPPR-SLGE-----------AVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSA 244 (402)
T ss_pred -HHhcCCCcccccccc-hhHH-----------HHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCH
Confidence 344555433221111 0000 013356778999998887777666665544444455666777789999
Q ss_pred cchhhhhhHhH-HHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhc-CCchHHHHHHH-H---HHh
Q 016374 235 TESGLFCVLPW-LTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH-VDSPAMAVLCM-A---CSQ 308 (390)
Q Consensus 235 ~~~~~~~~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~---~~~ 308 (390)
.+.+.+....+ .+.+++.++.+++.||+++|+.... ...........+..... .++.+...... + .+.
T Consensus 245 ~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~------~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g 318 (402)
T PRK11902 245 GEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLML------FGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGG 318 (402)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Confidence 99998876654 4689999999999999998843211 11111111111211111 22333222222 1 111
Q ss_pred hhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhc
Q 016374 309 GTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFST 384 (390)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 384 (390)
..............++ +..++..+..+....++..+++.+.|.+.|+.||+..|...+.+.+++..+.+...+
T Consensus 319 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~~ 391 (402)
T PRK11902 319 MGTAAFVALLMALCNR---SFSATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLMRG 391 (402)
T ss_pred HHHHHHHHHHHHhcCC---CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1111112222233332 233445566666777888877889999999999999999999888888776655433
No 71
>PRK09528 lacY galactoside permease; Reviewed
Probab=100.00 E-value=4.8e-31 Score=242.62 Aligned_cols=358 Identities=13% Similarity=0.067 Sum_probs=232.4
Q ss_pred cccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhh---hhhh---hhHHHHHHHHHH
Q 016374 8 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP---VAAK---LGLPFLLVVRVF 81 (390)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~---~~~~~l~~~r~l 81 (390)
+.+++|+|+.++|++.+.+.++..+++++.|+++||+|||++++.+..+.+++..... .++. .......++++.
T Consensus 37 l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (420)
T PRK09528 37 LHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIY 116 (420)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999999999999887666655443221 1110 011112333444
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
.|.+.....+....+..+ . ++++++.++......++|..++|++++.+.+ .+|+.+|++.+++.++..++.+...+|
T Consensus 117 ~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~ 193 (420)
T PRK09528 117 LGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPD 193 (420)
T ss_pred hhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhccccc
Confidence 444433333333333322 2 3567788899999999999999999999887 589999999888877766555555444
Q ss_pred CCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhc---CCcccchh
Q 016374 162 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL---HFNLTESG 238 (390)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---g~~~~~~~ 238 (390)
++++.+.. ++++ +++++.+..+.++.+|||+++...+........+.....+.|.|+.+.. +.+..+.+
T Consensus 194 ~~~~~~~~-~~~~-------~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 265 (420)
T PRK09528 194 APSTAKVA-NALG-------ANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFG 265 (420)
T ss_pred ccchhhhc-cchh-------cccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHH
Confidence 33321110 0000 0011111234556788998877666555555555566667788777643 45556778
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHH-HHHHHHHhhhccccccc
Q 016374 239 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSG 317 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 317 (390)
.+.+...+...++.+..|++.||+++|+....+ .........+ ....++.+.. ....+.+..........
T Consensus 266 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~-------~~l~~~~~~l--~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 336 (420)
T PRK09528 266 YLNSFQVFLEALIMFFAPFIINRIGAKNALLLA-------GTIMAVRIIG--SGFATGPLEVSILKLLHAFEVPFLLVGV 336 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHH-------HHHHHHHHHH--HHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888889999999999999999999643221 1111111111 2222333333 22333333332222222
Q ss_pred cchhccccCCCcchhHHHH-HHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhcC
Q 016374 318 LYSNHQDIAPRYSGVLLGL-SNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTG 385 (390)
Q Consensus 318 ~~~~~~~~~~~~~~~~~g~-~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
.....++.+++.+++..+. .++...+|..++|.+.|++.|..||+..|...+++.++..++.....++
T Consensus 337 ~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 337 FKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 2333455667888887665 6778899999999999999999999999999888887776665555443
No 72
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.4e-32 Score=228.77 Aligned_cols=348 Identities=18% Similarity=0.136 Sum_probs=273.7
Q ss_pred cccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccc
Q 016374 10 AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVA 89 (390)
Q Consensus 10 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 89 (390)
++.+-+++++|++.+...+.+.+.+++.|.+.||+|+|..+++|..++..+++++++.+ +++.++++|.+||+|.+..
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~--sy~~l~vAR~LQgvgsA~~ 176 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGN--SYPMLFVARSLQGVGSAFA 176 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcc--hhHHHHHHHHHhhhhHHHH
Confidence 44566788999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhhhhHHhhhcccCC-chhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 016374 90 MPAMNNILSKWVPVA-ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQ 168 (390)
Q Consensus 90 ~~~~~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (390)
+.+..++++|.+|++ +|++++|+.-.+.++|..+||++||.+++..|.+.+|++.+++.++...+.++..++...++++
T Consensus 177 ~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~ 256 (464)
T KOG3764|consen 177 DTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDS 256 (464)
T ss_pred HhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCccc
Confidence 999999999999866 4799999999999999999999999999999999999999999999887777666543332211
Q ss_pred CchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHH
Q 016374 169 LRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTM 248 (390)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 248 (390)
.. +..++++++++|.++.........+.........++.+..|.+..+..+.|..+....+..
T Consensus 257 ~~-----------------~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y 319 (464)
T KOG3764|consen 257 TE-----------------QGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSY 319 (464)
T ss_pred cc-----------------cCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccch
Confidence 10 1335678999999999888888888888888999999999988866669999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHH-HHHHHHHHhhhccc---cccccchhccc
Q 016374 249 AFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM-AVLCMACSQGTDAF---SQSGLYSNHQD 324 (390)
Q Consensus 249 ~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~ 324 (390)
.++..+.|.+.||+++.++ .....+++..+......+..+.+.- .+-....+++.... ..+........
T Consensus 320 ~ig~~lfg~la~k~~~~~w-------l~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~ 392 (464)
T KOG3764|consen 320 AIGTNLFGKLADKYPHLRW-------LLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDP 392 (464)
T ss_pred hccCchHHHHHHhcCchhH-------HHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcch
Confidence 9999999999999996532 3333344433333333333333221 11111222222221 12222222221
Q ss_pred cCCC---cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhh
Q 016374 325 IAPR---YSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS 383 (390)
Q Consensus 325 ~~~~---~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
...+ ..|..+++......+|.++||.++|.+.+..|+++...+.+...++-.-+..+++
T Consensus 393 rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll~ 454 (464)
T KOG3764|consen 393 RHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLLR 454 (464)
T ss_pred hhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112 5789999999999999999999999999999999998888887777665554443
No 73
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3e-31 Score=241.36 Aligned_cols=254 Identities=20% Similarity=0.336 Sum_probs=224.2
Q ss_pred ccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhcc
Q 016374 7 PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGE 86 (390)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 86 (390)
.+.+|.+....+.+.+.+++.++++++.++++.+.||++-.+.+....+++++..++..... |++.+++.|++.|+.+
T Consensus 71 g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~--s~~~~ialr~llGl~e 148 (495)
T KOG2533|consen 71 GLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVH--SFPGLIALRFLLGLFE 148 (495)
T ss_pred CCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHh
Confidence 35689999999999999999999999999999999999999999999999988888888888 9999999999999999
Q ss_pred ccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHh------hhcCChHHHHHHHHHHHHHHHHHHhhcc
Q 016374 87 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI------HRFGWPSVFYSFGSLGTVWFTVWLSKAH 160 (390)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~------~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 160 (390)
+..+|....+++.|+.++||++.++++.+..++|.++|.+++..+. ...||||.|++.++++++..++.++++|
T Consensus 149 s~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 149 SGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred cccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEec
Confidence 9999999999999999999999999999999999999999998864 3468999999999999999999999999
Q ss_pred CCCCCCCCCchhhhhh----hhhcc--cCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcc
Q 016374 161 SSPAEDPQLRPAEKKL----IVSSC--ASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNL 234 (390)
Q Consensus 161 ~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 234 (390)
+.|.+..-.+++|+.. .+++. ..++..+...+++.+++|++|...+..++.....+++.+|+|.|+++..|++.
T Consensus 229 ~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~ 308 (495)
T KOG2533|consen 229 DNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSE 308 (495)
T ss_pred CChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcCh
Confidence 9998654444443221 11111 11111455678889999999999999999999999999999999999667999
Q ss_pred cchhhhhhHhHHHHHHHHHHHHHHHHHH
Q 016374 235 TESGLFCVLPWLTMAFSANLGGWIADTL 262 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 262 (390)
.++..+..+..++++++.+++|.++||.
T Consensus 309 ~~a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 309 LQANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred HHhccccchHHhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999995
No 74
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=100.00 E-value=4.5e-30 Score=234.44 Aligned_cols=353 Identities=11% Similarity=0.034 Sum_probs=240.7
Q ss_pred cccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHh---hhhh---hhhHHHHHHHHHH
Q 016374 8 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT---PVAA---KLGLPFLLVVRVF 81 (390)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~---~~~~~~l~~~r~l 81 (390)
+.+++|.|+.+.|++.+.+.++..+++++.|+++||+|||+.++.+....+++.... .+.+ ......+++.|++
T Consensus 29 ~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (396)
T TIGR00882 29 LHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLY 108 (396)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 456799999999999999999999999999999999999999988776665544322 1111 0023445677899
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
.|++.+...+....+..|.. +++++.++......++|..++|.+++.+.+ .+||.+|++.+.+.++..++.+...||
T Consensus 109 ~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~ 185 (396)
T TIGR00882 109 LGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPK 185 (396)
T ss_pred HHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99988888888877777753 334567788888889999999999998866 599999999888888776555544444
Q ss_pred CCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhc---CCcccchh
Q 016374 162 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL---HFNLTESG 238 (390)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---g~~~~~~~ 238 (390)
+++++++ + +. .+ .++++.+..+.++++|||+++...+..+.....+.....+.+.|+++.+ +.+....+
T Consensus 186 ~~~~~~~-~--~~---~~--~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g 257 (396)
T TIGR00882 186 APSSATV-A--NA---LG--ANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFG 257 (396)
T ss_pred Cchhhhh-h--cc---cc--cccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHH
Confidence 3322110 0 00 00 0111122345678899999887777766666666667677888888754 44556678
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchH-HHHHHHHHHhhhccccccc
Q 016374 239 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA-MAVLCMACSQGTDAFSQSG 317 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 317 (390)
...+...+...++....+++.||+++|+.... +....+.........++.+ ......+.+.+........
T Consensus 258 ~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~---------~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 328 (396)
T TIGR00882 258 YVTTMGELLNALIMFCAPLIINRIGAKNALLI---------AGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGC 328 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHH---------HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888899999999999999999954322 1111111111212223333 3333333333322111111
Q ss_pred cchhccccCCCcchhHHHH-HHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Q 016374 318 LYSNHQDIAPRYSGVLLGL-SNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN 380 (390)
Q Consensus 318 ~~~~~~~~~~~~~~~~~g~-~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 380 (390)
.....++.+++.+++..+. .+....+|+.++|.+.|++.|..||+..|.+.+++.++..+...
T Consensus 329 ~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 329 FKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 1122233455677776666 67889999999999999999999999999999888877766543
No 75
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=100.00 E-value=4.5e-30 Score=234.90 Aligned_cols=354 Identities=12% Similarity=0.064 Sum_probs=242.4
Q ss_pred ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhh-HHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG-KAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
+..+.+.+++|.|.+|+|++.+++.++..++++++|+++||+|| |+++..+.++.+++..+..+.+ +++.+++.|++
T Consensus 24 ~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 101 (418)
T TIGR00889 24 TLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVT--TPAGMFPVLLA 101 (418)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHH
Confidence 34456778899999999999999999999999999999999965 7788888888888888888888 89999999999
Q ss_pred HhhccccchhhhhHHhh--------hcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHH
Q 016374 82 MGIGEGVAMPAMNNILS--------KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 153 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~ 153 (390)
.|++.+...+...++.. |..+...|.|.+| .+|.+++|.+++.+....+|+ +|++.+++.++..+
T Consensus 102 ~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~ 174 (418)
T TIGR00889 102 NSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGV 174 (418)
T ss_pred HHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHH
Confidence 99987767666655432 2232334555555 478888899888774333354 45566666665544
Q ss_pred HHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCc
Q 016374 154 VWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFN 233 (390)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 233 (390)
. .+..||+|+++++.+.+.++ ....+.++++|+|+++...+..++..........+.|.|+++ .|.+
T Consensus 175 ~-~~~~~e~~~~~~~~~~~~~~-----------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~ 241 (418)
T TIGR00889 175 F-ALTLPDIPVAKSTAKMSIKV-----------MLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRN 241 (418)
T ss_pred H-HhcCCCCCCCccccccCHHH-----------HhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hccc
Confidence 3 44556654322211110000 001234567899998888888777776666777888989887 4654
Q ss_pred c--------cchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc--hH-HHHH
Q 016374 234 L--------TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDS--PA-MAVL 302 (390)
Q Consensus 234 ~--------~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~ 302 (390)
+ ...+...+...+..+++.+..+++.||+++|+... ...........+......+. .+ ....
T Consensus 242 ~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~-------~~~~~~~v~~~l~~~~~~~~~~~~~l~l~ 314 (418)
T TIGR00889 242 PEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVML-------LSLVAWALRFGFFAYGDPEYFGYALLFLS 314 (418)
T ss_pred ccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH-------HHHHHHHHHHHHHHHcCcchhhHHHHHHH
Confidence 4 55688888889999999999999999999984322 11111111111222211111 12 2233
Q ss_pred HHHHHhhhccccccccchhccccCCCcchhHHHHHH-HHHHHHHHHHHHHHHHHHhc------CCchhHHHHHHHHHHHH
Q 016374 303 CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSN-TAGVLAGVFGTAATGYILQH------GSWDDVFKVSVGLYLVG 375 (390)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~g~~ig~~i~g~l~~~------~g~~~~~~~~~~~~~~~ 375 (390)
..+.+.+.+...........+..|+++|++++|+.+ ....+|..+||.+.|.+.|+ .||+..|.+.+++.+++
T Consensus 315 ~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~ 394 (418)
T TIGR00889 315 MIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAIL 394 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHH
Confidence 344444444333333344455666689999999997 56789999999999999998 35899999888888877
Q ss_pred HHHHHHhhcC
Q 016374 376 TAVWNLFSTG 385 (390)
Q Consensus 376 ~~~~~~~~~~ 385 (390)
.++..++.++
T Consensus 395 ~~l~~~~~~~ 404 (418)
T TIGR00889 395 AVLFMIFFKY 404 (418)
T ss_pred HHHHHHHhCC
Confidence 7776665443
No 76
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.6e-30 Score=214.23 Aligned_cols=354 Identities=16% Similarity=0.181 Sum_probs=282.2
Q ss_pred CcccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Q 016374 1 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 80 (390)
Q Consensus 1 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 80 (390)
+++.++++++|+|+|.+..|+++++..++..+.+++..+++.|+|.++.+..++++.+++.++-...+ .+.++.+-.
T Consensus 31 vgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~---~~~L~~gt~ 107 (395)
T COG2807 31 VGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGG---LPLLFLGTL 107 (395)
T ss_pred hhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhccc---HHHHHHHHH
Confidence 36788999999999999999999999999999999999999999999999999999999999987764 578889999
Q ss_pred HHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhc-CChHHHHHHHHHHHHHHHHHHhhc
Q 016374 81 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWFTVWLSKA 159 (390)
Q Consensus 81 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~ 159 (390)
+.|.|.+......++.+.+.+ +|+-+..++++....++|..+++.+.-.+.++. |||......+.++++.++.++...
T Consensus 108 l~G~gIav~nVLLPslIK~~F-pk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~ 186 (395)
T COG2807 108 LAGAGIAVINVLLPSLIKRDF-PKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQA 186 (395)
T ss_pred HHHhhHHHHHHhhhHHHHhhc-ccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999 688899999999999999999999999999887 799999999999988876655432
Q ss_pred cCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhh
Q 016374 160 HSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGL 239 (390)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 239 (390)
.+++.... +. +..+...++|+|.-|...+.+.+.++.++....|+|.++.| .|+|+.++|.
T Consensus 187 ---~r~~~~~~-~~--------------~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~ 247 (395)
T COG2807 187 ---LREQAASI-AT--------------KLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGS 247 (395)
T ss_pred ---cccccccc-cc--------------ccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhh
Confidence 11110000 00 01122347899999999999999999999999999999999 5999999999
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccc
Q 016374 240 FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLY 319 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (390)
+.+...+.+++.++....+.+|..+++.... ....++....+.+. +...+.++.. ..++|.+.+...+....
T Consensus 248 llsl~~l~~~~~~ll~P~la~R~~n~r~~~~-----~~~~~~l~G~~G~~-~~P~~~~~lw--~~llG~G~G~~F~laL~ 319 (395)
T COG2807 248 LLSLMQLAQLPTALLIPLLARRSKNQRPLVV-----LALLLMLVGLVGLL-LAPGQLPILW--ALLLGLGQGGAFPLALT 319 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchHHH-----HHHHHHHHHHHHHH-HhhhhHHHHH--HHHHhCccchHHHHHHH
Confidence 9999999999999999999998766643221 11122222222222 2222333322 46677776666555555
Q ss_pred hhccc-cCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCchhHHHHHHHHHHHHHHHHHHhhcC
Q 016374 320 SNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFSTG 385 (390)
Q Consensus 320 ~~~~~-~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
.+... ..+++.+.-.|+.+..+++-.+.||.+.|++.|. ++|+..+.....+.+...+.-+...|+
T Consensus 320 li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~r~ 387 (395)
T COG2807 320 LILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAGRN 387 (395)
T ss_pred HHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcchh
Confidence 44433 3457889999999999999999999999999998 779888888877777777666555444
No 77
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.7e-31 Score=242.63 Aligned_cols=371 Identities=16% Similarity=0.205 Sum_probs=297.5
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHH-HH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV-RV 80 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-r~ 80 (390)
++..+.++++++.+..+++|+.++......+..|+.+.+.||+|.|++.+.|.++.+++.++.++++ ++|++++. -+
T Consensus 66 Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~--~i~~l~lt~gv 143 (509)
T KOG2504|consen 66 GLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFAT--SLWQLYLTFGV 143 (509)
T ss_pred hhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHH
Confidence 4567889999999999999999999999999999999999999999999999999999999999999 88888775 79
Q ss_pred HHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhcc
Q 016374 81 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 160 (390)
Q Consensus 81 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 160 (390)
+.|+|.++.+.....++..++ +|+|+.+.|+...+.++|..+-|.+..++.+.+|||+.+++.+.+.+-..+......|
T Consensus 144 i~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 144 IGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999 8999999999999999999999999999999999999999999988777776666666
Q ss_pred CCCCCCCC--------------------Cc--------hh----hhhhhhhcccCCC--CCCcchh---hhhhcCchhHH
Q 016374 161 SSPAEDPQ--------------------LR--------PA----EKKLIVSSCASKE--PVKTIPW---GLILSKPPVWA 203 (390)
Q Consensus 161 ~~~~~~~~--------------------~~--------~~----~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~ 203 (390)
..++..++ .+ .+ +....++..++.+ +.+.... .+++|+|.++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~ 302 (509)
T KOG2504|consen 223 LSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLL 302 (509)
T ss_pred CCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHH
Confidence 33332111 00 00 0000000000000 1111111 47899999999
Q ss_pred HHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Q 016374 204 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG 283 (390)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 283 (390)
..+...+...++.....++|.|.++ .|++..+++.+.+..++..++++++.|++.||...++ ..+..++++.
T Consensus 303 ~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~-------~~~~~~~ll~ 374 (509)
T KOG2504|consen 303 LALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRA-------LVLFLLTLLI 374 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccch-------HHHHHHHHHH
Confidence 9999999999999999999999997 7999999999999999999999999999999988552 3444555555
Q ss_pred HHHHHHHHhcCCch-HHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-c
Q 016374 284 PAFFLTQLSHVDSP-AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-W 361 (390)
Q Consensus 284 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g-~ 361 (390)
.++.....+..+.. .+...+.+++...+...........+.+..++-..+.|+...++.++..+||++.|.+.|..+ |
T Consensus 375 ~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y 454 (509)
T KOG2504|consen 375 AGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNY 454 (509)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCe
Confidence 55555555555555 444555555666555544444455566667899999999999999999999999999999855 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHhh
Q 016374 362 DDVFKVSVGLYLVGTAVWNLFS 383 (390)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
...|+.++.+.+++..++++..
T Consensus 455 ~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 455 DHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999987765543
No 78
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.98 E-value=2.5e-30 Score=232.87 Aligned_cols=319 Identities=13% Similarity=0.026 Sum_probs=229.7
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhh-----hhHHH-HHHHHHHHHHHHHHhhhhhh-hhHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-----GGKAV-LGFGVVWWSIATALTPVAAK-LGLPF 74 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~~~-~~~~~ 74 (390)
++.+|.+.+|+|+|.+++|+..+. .+...+ .+++|+++||+ ||||. ++.+.+..++.....++.++ .+.+.
T Consensus 8 ~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~ 85 (356)
T TIGR00901 8 GNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPL 85 (356)
T ss_pred HhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHH
Confidence 456788999999999999999766 555555 99999999998 89887 56777778777777777631 15666
Q ss_pred HHHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcC--------ChHHHHHHHH
Q 016374 75 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG--------WPSVFYSFGS 146 (390)
Q Consensus 75 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--------w~~~f~~~~~ 146 (390)
+....++.+.+.+...++..+++.|++|+|+|+++.++...+.++|.++++.+++.+.++.| ||..|++.++
T Consensus 86 l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai 165 (356)
T TIGR00901 86 LAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTAL 165 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHH
Confidence 77778888888888899999999999999999999999999999999999999999998888 9999999888
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCch---hHHHHHHHHHHHHHHHHHhhchH
Q 016374 147 LGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPP---VWALIVSHFCHNWGTFILLTWMP 223 (390)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 223 (390)
..++..+..++..||+++++++ ++++++. .+.++++++|+|. ++...+..++..........+.|
T Consensus 166 ~~l~~~~~~~~~~~e~~~~~~~-~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (356)
T TIGR00901 166 LILPGLLVTLFLAKEPQEDASV-PKPLTQA-----------VLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTT 233 (356)
T ss_pred HHHHHHHHHHHhccCCCccccc-chhHHHH-----------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777655544445554322111 1111000 1234566777775 66677777777788888899999
Q ss_pred HHHhHhcCCcccchhhhhhHhH-HHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH-HHHHh-cC------
Q 016374 224 TYYNQVLHFNLTESGLFCVLPW-LTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF-LTQLS-HV------ 294 (390)
Q Consensus 224 ~~l~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~------ 294 (390)
.|+++ +|+++.+.+......+ +..+++.++++++.||+++|+.... .......... ..... ..
T Consensus 234 ~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (356)
T TIGR00901 234 LFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLL-------FGIVQALTNAGFVWLASNGHHDGIT 305 (356)
T ss_pred HHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH-------HHHHHHHHHHHHHHHHhcCcccccc
Confidence 99998 8999999988887666 5778999999999999998854221 1111111111 11111 11
Q ss_pred -CchHHHH-HHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHH
Q 016374 295 -DSPAMAV-LCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGV 342 (390)
Q Consensus 295 -~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 342 (390)
+..+... ...+.+.+.+...........+..|+|+||+.+|+.++..+
T Consensus 306 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 306 FPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 2223233 33333455455555555566677788999999999887654
No 79
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.98 E-value=3.6e-29 Score=224.69 Aligned_cols=365 Identities=14% Similarity=0.079 Sum_probs=259.2
Q ss_pred HHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHhhccccchhhhhHHh
Q 016374 19 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK-LGLPFLLVVRVFMGIGEGVAMPAMNNIL 97 (390)
Q Consensus 19 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i 97 (390)
.+.+.+++.+|.++|++..+.++||+|||..+..+.++..++.++..++.. .++++++++|++.|+..|.......-++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 467788999999999999999999999999999998888888777665531 1789999999999999999999999999
Q ss_pred hhcccCCchhHHHHHHHHhhhhhhHhHHhhHHH--HhhhcCChHHHHHHHHHHHHHHHHHHhhccCCCCCC---CCCchh
Q 016374 98 SKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF--LIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAED---PQLRPA 172 (390)
Q Consensus 98 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~--l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 172 (390)
.|..|++.||..-...+.+..+|.+++..++.. +-+...|++.+....+++++.. +...+.||+|+.- ++++++
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l-~~l~~~PESPk~Ll~~k~~~~~ 220 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQL-ALLPFLPESPKYLLIKKGDEEE 220 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHH-HHHhcCCCCcchHHHHcCCHHH
Confidence 999999999999999999999999999776643 3344569999998888877765 4556779998731 111111
Q ss_pred hh----------------hhhhh--cccCCCCCCcchhhhhhcCchhHHHHHHH-----HHHHHHHHHHhhchHHHHhHh
Q 016374 173 EK----------------KLIVS--SCASKEPVKTIPWGLILSKPPVWALIVSH-----FCHNWGTFILLTWMPTYYNQV 229 (390)
Q Consensus 173 ~~----------------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~ 229 (390)
.+ +...+ +.++.++.++.++++++++|+...-.... .....+.+....|...++++
T Consensus 221 A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~- 299 (485)
T KOG0569|consen 221 ARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT- 299 (485)
T ss_pred HHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-
Confidence 00 00011 11112223566788899887665432222 22233445566777777777
Q ss_pred cCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchH---HHHHHHHH
Q 016374 230 LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA---MAVLCMAC 306 (390)
Q Consensus 230 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 306 (390)
.|+++.++-+.....+....+.++++.++.||.|||+.+..+. .......+..............+. .....+..
T Consensus 300 aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~--~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~ 377 (485)
T KOG0569|consen 300 AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISL--SLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLF 377 (485)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHH--HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 5999999999999999999999999999999999997666543 222222222222222222221111 12333334
Q ss_pred Hhhhccccccccchhc-cccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhcC
Q 016374 307 SQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTG 385 (390)
Q Consensus 307 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
...+.....+..+.+. +.++++.|+.+.+.......+...+-......+.+..|- ..|+...+.+++..+..+...++
T Consensus 378 ~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPE 456 (485)
T KOG0569|consen 378 IISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPE 456 (485)
T ss_pred HHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcc
Confidence 4444444445555555 445558999999999999999999999999999999876 77777777777777777766555
Q ss_pred CCc
Q 016374 386 EKV 388 (390)
Q Consensus 386 ~~~ 388 (390)
+|.
T Consensus 457 Tkg 459 (485)
T KOG0569|consen 457 TKG 459 (485)
T ss_pred cCC
Confidence 553
No 80
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.97 E-value=6.3e-30 Score=262.65 Aligned_cols=346 Identities=13% Similarity=0.077 Sum_probs=250.3
Q ss_pred chHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHH---HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhh
Q 016374 17 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGF---GVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAM 93 (390)
Q Consensus 17 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 93 (390)
...++..+++.+++.++++++|+++||+|||+++.. ..+...+........+ |+++++++|+++|++.+...|+.
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~--s~~~l~~~~~l~gi~~a~~~p~~ 129 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLN--SVPLLFAALFLMGIHSALFGPIK 129 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHhhchHH
Confidence 457888899999999999999999999999998633 2222222223333446 89999999999999999999999
Q ss_pred hHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchhh
Q 016374 94 NNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAE 173 (390)
Q Consensus 94 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (390)
.+++.|++|+++|++++|+.+++.++|.++||++++++.+..+|++.|....+..++.. +.....+++++.++..+.+.
T Consensus 130 ~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 208 (1140)
T PRK06814 130 YSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGW-LASLFIPKTGNAAPDLKIDR 208 (1140)
T ss_pred HHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH-HHHhhCCCCCCCCCCCeecc
Confidence 99999999999999999999999999999999999999999999999954444444443 34444455433222111100
Q ss_pred hhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHH
Q 016374 174 KKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSAN 253 (390)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 253 (390)
.. . ......++.+.++|.++...+..+..++....+..++|.|+++.+|.++.+.+.+.+...++.+++.+
T Consensus 209 ~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~ 279 (1140)
T PRK06814 209 NI-I--------RSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSF 279 (1140)
T ss_pred ch-H--------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHH
Confidence 00 0 00023466788899999998888888888888889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH-------------HH-HHhcCCchHHHHHHHHHHhhhccccccccc
Q 016374 254 LGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF-------------LT-QLSHVDSPAMAVLCMACSQGTDAFSQSGLY 319 (390)
Q Consensus 254 ~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (390)
+.+++.||..+++....+. .......+..... .. .....+.+...+..++++.+.+....+...
T Consensus 280 ~~g~l~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 357 (1140)
T PRK06814 280 LASKLSEGRITLLYVPIGA--LLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFA 357 (1140)
T ss_pred HHHHHhCCceeeeeehHHH--HHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHH
Confidence 9999998877665433321 1111111111100 00 000123344444555566666665556556
Q ss_pred hhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCchhHHHHHHHHHHHHH
Q 016374 320 SNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGT 376 (390)
Q Consensus 320 ~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~-~g~~~~~~~~~~~~~~~~ 376 (390)
...+..+++.+|+++|+.++...++..+++.+.|.+.+. .++...+++.+.+.++..
T Consensus 358 ~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 415 (1140)
T PRK06814 358 ALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLIVA 415 (1140)
T ss_pred HHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 666777789999999999999999999999999999854 566666665555444443
No 81
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.97 E-value=1.3e-29 Score=234.20 Aligned_cols=356 Identities=17% Similarity=0.152 Sum_probs=271.3
Q ss_pred cccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhh---hhhhHHHHHHHHHHH
Q 016374 6 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA---AKLGLPFLLVVRVFM 82 (390)
Q Consensus 6 p~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~ 82 (390)
+-+..+..-|+..++++.++..+...+.++++|.++||++|||+++.+.++.++..+..++. ...+.+.+++.-++.
T Consensus 34 ~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~ 113 (524)
T PF05977_consen 34 AWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLL 113 (524)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHH
Confidence 34445666788999999999999999999999999999999999999998877665544332 223678899999999
Q ss_pred hhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCC
Q 016374 83 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 162 (390)
Q Consensus 83 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (390)
|++.+...|+.++++.|..|+++..++.++.+...++...+||.++|.+....|-.+.|.+.++..++.........++.
T Consensus 114 g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~ 193 (524)
T PF05977_consen 114 GIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPP 193 (524)
T ss_pred HHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 99999999999999999999999999999999999999999999999999999999999998877666554444443332
Q ss_pred CCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhh
Q 016374 163 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV 242 (390)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 242 (390)
++++ ..+++-. ..-+..++.+.++|.+....+..++.++....+...+|.+.++.+|.++...|++.+
T Consensus 194 ~~~~-~~~e~~~-----------~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a 261 (524)
T PF05977_consen 194 PPSS-LPRERFF-----------SALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLA 261 (524)
T ss_pred cccc-cchhhhh-----------hhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHH
Confidence 2211 1111100 011334566667787777766666666666677788999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHH-HHHHHHHhhhccccccccchh
Q 016374 243 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYSN 321 (390)
Q Consensus 243 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 321 (390)
..+++.++|+++.+++.+|.++++.. ..+.+..+..+......++.+.. ...++.|.+............
T Consensus 262 ~~gvGai~Gal~~~~l~~~~~~~~lv---------~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~ 332 (524)
T PF05977_consen 262 AFGVGAILGALLLPRLRRRLSSRRLV---------LLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLV 332 (524)
T ss_pred HHHHHHHHHHHHHHHhhcccCcchhh---------HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888877432 22233333333344444444443 344444555444444444455
Q ss_pred ccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh
Q 016374 322 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 322 ~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
....|++.||++++++++....+..+|..+.|.+.|+.|.+..+.+.+++.+++.++....
T Consensus 333 Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 333 QLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 5666778999999999999999999999999999999999999988887777776665544
No 82
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=5.1e-29 Score=213.11 Aligned_cols=355 Identities=15% Similarity=0.175 Sum_probs=270.6
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhh-hhhhhhHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP-VAAKLGLPFLLVVRV 80 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~ 80 (390)
.+.+|.+++.|++|..|.+++...+..++.+.+++.|++.+|+|+|+.++.++.++++++.+.. .+...++..++++-+
T Consensus 33 diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lF 112 (422)
T COG0738 33 DILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALF 112 (422)
T ss_pred hhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Confidence 3678999999999999999999999999999999999999999999999999999999999874 222228899999999
Q ss_pred HHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhh-------------------cCChHHH
Q 016374 81 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-------------------FGWPSVF 141 (390)
Q Consensus 81 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-------------------~gw~~~f 141 (390)
+.|.|.+....+.++++....|+++..+-+++.+...++|..++|++++.+..+ -.||++|
T Consensus 113 ila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pY 192 (422)
T COG0738 113 ILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPY 192 (422)
T ss_pred HHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHH
Confidence 999999999999999999999999999999999999999999999999988762 2388888
Q ss_pred HHHHHHHHHHHHHHHhhc-cCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhh
Q 016374 142 YSFGSLGTVWFTVWLSKA-HSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLT 220 (390)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (390)
...+...++..+.....+ |+.++.+++..+. ++....+++|+|+++...+..+++-........
T Consensus 193 l~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~---------------~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gs 257 (422)
T COG0738 193 LILAGLLVLLAVLILLSKLPDLQVAAPSLGAS---------------GSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGS 257 (422)
T ss_pred HHHHHHHHHHHHHHHhccCCcCCccccccccc---------------ccchHHHHHhChHHHHHHHHHHHHHhHHHHHHH
Confidence 887766665544433322 2211111111000 011456789999999999999999999999999
Q ss_pred chHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHH
Q 016374 221 WMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA 300 (390)
Q Consensus 221 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (390)
|++.|+.|..|.+..++....+....+.++|++++-++.+|+...|.+ .+..+.....+......+..+..
T Consensus 258 fl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~L---------af~a~~~ill~~~~~l~~g~v~~ 328 (422)
T COG0738 258 FLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYL---------AFYALIAILLLLAVALIGGVVAL 328 (422)
T ss_pred HHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH---------HHHHHHHHHHHHHHHHhcChHHH
Confidence 999999998899999999999999999999999999999999877422 22222222222222233445556
Q ss_pred HHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Q 016374 301 VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN 380 (390)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 380 (390)
....+++.+.....++......+..+ ++...+.++ ......|+++-|++.|++.|+.|-+..+......+.+-.+.+.
T Consensus 329 ~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~-l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV~~~~ 406 (422)
T COG0738 329 YALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGL-LVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYVLFFA 406 (422)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhccC-cccccccee-eeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 66666777766665555444445555 444444444 4557789999999999999998888777755555554444333
Q ss_pred Hh
Q 016374 381 LF 382 (390)
Q Consensus 381 ~~ 382 (390)
+.
T Consensus 407 ~~ 408 (422)
T COG0738 407 LI 408 (422)
T ss_pred HH
Confidence 33
No 83
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.97 E-value=1.1e-28 Score=228.80 Aligned_cols=377 Identities=14% Similarity=0.095 Sum_probs=258.1
Q ss_pred cccc-ccc--cCcCcchHHHHHHHHHHHHHHHHHhhHHhhhh-hhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Q 016374 5 ILPM-SAE--FNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 80 (390)
Q Consensus 5 lp~i-~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 80 (390)
+|.+ .++ +|+|+.+.+++.+.+.++..++.+++|+++|| +|||+++..+.++.+++.++.++++ +.+.++++|.
T Consensus 33 L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~--~~~~~~~~~~ 110 (475)
T TIGR00924 33 LAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSI--YPDLIFYGLG 110 (475)
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcc--cHhHHHHHHH
Confidence 3443 445 89999999999999999999999999999999 8999999999999999999999988 8888999999
Q ss_pred HHhhccccchhhhhHHhhhcccCCc---hhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHh
Q 016374 81 FMGIGEGVAMPAMNNILSKWVPVAE---RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 157 (390)
Q Consensus 81 l~G~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 157 (390)
+.|++.|...+...++++|++|+++ |++++++.+.+.++|..+||.+++++.+++|||+.|.+.++..++..+....
T Consensus 111 l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 111 TIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred HHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998754 8889999999999999999999999999999999999877655544333322
Q ss_pred hcc---CCCCCCCCCchhhhhhhh--------------h---ccc----------------------CCCCCCcchhhhh
Q 016374 158 KAH---SSPAEDPQLRPAEKKLIV--------------S---SCA----------------------SKEPVKTIPWGLI 195 (390)
Q Consensus 158 ~~~---~~~~~~~~~~~~~~~~~~--------------~---~~~----------------------~~~~~~~~~~~~~ 195 (390)
..+ +.|+++++.++++++... . ..+ ..++ +.+..+.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 268 (475)
T TIGR00924 191 GRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKP--RLDAVAR 268 (475)
T ss_pred cccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhc--cCCHHHH
Confidence 221 212111111111100000 0 000 0000 0011111
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccc----hhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhH
Q 016374 196 LSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTE----SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTT 271 (390)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~ 271 (390)
.|...+..+.+...+.+..+....+.++.+.++..+.+... .+.+.+...+..++..++..++..|.+||+.....
T Consensus 269 ~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~ 348 (475)
T TIGR00924 269 NKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTT 348 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 12223445555566666777777777888887754544222 66788888888888888877766666664211111
Q ss_pred HHHHHHHHHHHHHHHHHHHH--------hcCCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHH
Q 016374 272 VRKIMQSIGFLGPAFFLTQL--------SHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVL 343 (390)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 343 (390)
..+...+..+...+...... ...+.++......+.+.+.....+.......+..|++.||+.+|+......+
T Consensus 349 ~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~ 428 (475)
T TIGR00924 349 PLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAM 428 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 01111111111111111111 0223444555666667776666666666666777778999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhcC
Q 016374 344 AGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTG 385 (390)
Q Consensus 344 g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
|..+++.+.....+..++...|...+...++..++.++..++
T Consensus 429 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (475)
T TIGR00924 429 GSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVPW 470 (475)
T ss_pred HHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888887788888888887777777666665443
No 84
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.97 E-value=4.1e-30 Score=244.62 Aligned_cols=264 Identities=15% Similarity=0.238 Sum_probs=212.3
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-------------
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA------------- 68 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~------------- 68 (390)
++.+|+++++|+++..+.|++.+.+.+++.++.++.+++.||+||||.+.++.++++++++++++.+
T Consensus 53 ~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 53 NSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred HhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 5678999999999999999999999999999999999999999999999999999999999987753
Q ss_pred ------------------------------------hhhHHHHHHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHH
Q 016374 69 ------------------------------------KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLAL 112 (390)
Q Consensus 69 ------------------------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 112 (390)
+..+..++++|+++|+|.+...+...+++.|++|+++|++++++
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i 212 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGI 212 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHH
Confidence 00245677899999999999999999999999999999999999
Q ss_pred HHHhhhhhhHhHHhhHHHHhhhc----------------------CChHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCc
Q 016374 113 VYSGMYLGSVTGLAFSPFLIHRF----------------------GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLR 170 (390)
Q Consensus 113 ~~~~~~~g~~~g~~~~~~l~~~~----------------------gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (390)
......+|..+|+.+++++.+.+ +||..|++.+++.++..+..+.+.++.|++.++.+
T Consensus 213 ~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~ 292 (633)
T TIGR00805 213 LESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVN 292 (633)
T ss_pred HHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccc
Confidence 99999999999999999988643 27778888888887766555544433333221111
Q ss_pred hh-hhhhhhhc-ccCC-C------CCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhh
Q 016374 171 PA-EKKLIVSS-CASK-E------PVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 241 (390)
Q Consensus 171 ~~-~~~~~~~~-~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 241 (390)
.+ ++++..++ .++. + ......++++++||.++...+..++.......+.+++|.|+++.+|+++.+++.+.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~ 372 (633)
T TIGR00805 293 VDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLI 372 (633)
T ss_pred hhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHh
Confidence 00 10000000 0000 0 00123466789999999999999999999999999999999999999999999998
Q ss_pred hHhHH-HHHHHHHHHHHHHHHHHhc
Q 016374 242 VLPWL-TMAFSANLGGWIADTLVSK 265 (390)
Q Consensus 242 ~~~~~-~~~~~~~~~g~l~d~~~~~ 265 (390)
....+ +.+++.+++|+++||++.+
T Consensus 373 ~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 373 GVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred hhhhhhHHHHHHhhhhheeeeeccc
Confidence 87766 5689999999999999855
No 85
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.97 E-value=4.9e-29 Score=256.93 Aligned_cols=351 Identities=16% Similarity=0.126 Sum_probs=247.4
Q ss_pred cccccccCcCc--chHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhh---hhhhhhHHHHHHHHH
Q 016374 6 LPMSAEFNWNP--ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP---VAAKLGLPFLLVVRV 80 (390)
Q Consensus 6 p~i~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~~~r~ 80 (390)
+.+.++++.+. ...+++.+++.+++.++++++|+++||+|||++++.+.++..+..++.. .++ +++.+++.|+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~ 111 (1146)
T PRK08633 34 NTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLG--WFWLAFAVTF 111 (1146)
T ss_pred HHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHH
Confidence 34455566543 4479999999999999999999999999999999998877666555443 446 7899999999
Q ss_pred HHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhh--------c-CChHHHHHHHHHHHHH
Q 016374 81 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--------F-GWPSVFYSFGSLGTVW 151 (390)
Q Consensus 81 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------~-gw~~~f~~~~~~~~~~ 151 (390)
++|++.+...++..+++.|++|+++|++++++...+.++|.++|+.+++++.+. + +|++.+.+..+...+.
T Consensus 112 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (1146)
T PRK08633 112 LLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVL 191 (1146)
T ss_pred HHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999876 2 3445444444333333
Q ss_pred HHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcC
Q 016374 152 FTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLH 231 (390)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 231 (390)
.++..+..|+.++......+++.. .........++.++++|.++...+..++..........++|.|+++.+|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 264 (1146)
T PRK08633 192 GLIFAYRLPKVPAAAPEVFDKKKY-------LFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLG 264 (1146)
T ss_pred HHHHHhcCcCCCCCCccccccccc-------ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC
Confidence 333444456554432221100000 0000012345667888888888777777777777888899999999899
Q ss_pred Cccc-chhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhc-CCchHHHHHHHHHHhh
Q 016374 232 FNLT-ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH-VDSPAMAVLCMACSQG 309 (390)
Q Consensus 232 ~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 309 (390)
.+.. +.+++.+...++.++++++.+++.||+++++....+ .++.+..+..... .+.+...+..++.+.+
T Consensus 265 ~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 335 (1146)
T PRK08633 265 LDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLG---------ALGLALSLFLLPTAPSLASVLVLFFLFGFS 335 (1146)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHH---------HHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 9988 899999999999999999999999999887543321 1111111111111 1223334444555555
Q ss_pred hccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCchhHHHHHHHHHHH
Q 016374 310 TDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLV 374 (390)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~-~g~~~~~~~~~~~~~~ 374 (390)
.+....+......+..+++.||+++|+.+++..+|..+++.+.+.+... .++...+++.+.+.++
T Consensus 336 ~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 336 AGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 5555444444555666778999999999999999998888887766543 3444455555444433
No 86
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.97 E-value=2.6e-29 Score=232.72 Aligned_cols=338 Identities=14% Similarity=0.103 Sum_probs=237.9
Q ss_pred ccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhh----hhhHH-HHHHHHHHHHHHHHHhhhhhhh----hHHHH
Q 016374 5 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKA-VLGFGVVWWSIATALTPVAAKL----GLPFL 75 (390)
Q Consensus 5 lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~~----~~~~l 75 (390)
.+.+.+++|+|+.++|++.++..+..++..|+.|+++|| +|||| .++.+....+++.+++.+.++. ....+
T Consensus 23 ~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 102 (437)
T TIGR00792 23 LFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYA 102 (437)
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence 455778899999999999999999999999999999997 68755 5778888888888877766521 14566
Q ss_pred HHHHHHHhhccccchhhhhHHhhhcc-cCCchhHHHHHHHHhhhhhhHhHHhhHHHHhh-------hcCChHHHHHHHHH
Q 016374 76 LVVRVFMGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-------RFGWPSVFYSFGSL 147 (390)
Q Consensus 76 ~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------~~gw~~~f~~~~~~ 147 (390)
++.+++.+++.+...++..++..|.. +++||++..++.+.+..+|..+++.+.+.+.. ..+||+.+.+.+++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l 182 (437)
T TIGR00792 103 YITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALI 182 (437)
T ss_pred HHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHH
Confidence 77888999988888888888899987 46899999999999999998887776665542 45899999999988
Q ss_pred HHHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHh
Q 016374 148 GTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYN 227 (390)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 227 (390)
.++.....++..+|+++++++.+ + ++...+..+++++|+|.++...+..++..........+.+.|.+
T Consensus 183 ~~~~~~~~~~~~~e~~~~~~~~~-~-----------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (437)
T TIGR00792 183 GVVSLIICFFGTKERYSEIPKNI-E-----------KKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFT 250 (437)
T ss_pred HHHHHHHHHcCCEecCCCCCccc-c-----------cCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEe
Confidence 88877666666666542211100 0 00111334667889999998888888888777777777777776
Q ss_pred HhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 016374 228 QVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACS 307 (390)
Q Consensus 228 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (390)
+..+ ++.+.+.+.....++.+++.++.+++.||+++|+.... .................+.+.......+.+
T Consensus 251 ~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 322 (437)
T TIGR00792 251 YVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAG-------GILLMVLGYLIFFFAGSNLPLILVLIILAG 322 (437)
T ss_pred eecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH-------HHHHHHHHHHHHHHcchhHHHHHHHHHHHH
Confidence 6555 45566677777789999999999999999998854322 111111111111111122222233333344
Q ss_pred hhhccccccccchhcccc-------CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCch
Q 016374 308 QGTDAFSQSGLYSNHQDI-------APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWD 362 (390)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~ 362 (390)
.+.+...........+.. +++.+|...|+.++...+|..+++.+.|.+.|..||.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 323 FGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 444333322222222222 2456899999999999999999999999999987663
No 87
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.97 E-value=3.9e-28 Score=221.19 Aligned_cols=351 Identities=13% Similarity=0.083 Sum_probs=244.2
Q ss_pred ccccccccccCcCcchHHHH--HHHHHHHHHHHHHhhHH-hhhhhhhHHHHHHHHHHH-HHHHHHhh---hhhhhhHHHH
Q 016374 3 IAILPMSAEFNWNPATVGLI--QSSFFWGYLLTQIAGGI-WADTVGGKAVLGFGVVWW-SIATALTP---VAAKLGLPFL 75 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~~g~~--~s~~~~~~~~~~~~~g~-l~dr~Grr~~l~~~~~~~-~~~~~~~~---~~~~~~~~~l 75 (390)
+.+|.+.+|.|.|.+++|++ .+...+...+.+|+++. ..||+||||..++...+. +......+ .... +...+
T Consensus 22 p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 100 (390)
T TIGR02718 22 DALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVA-GAGWA 100 (390)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchh-hHHHH
Confidence 56788889999999999997 46778888888888855 799999999875555332 22222222 2221 23344
Q ss_pred HHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHH
Q 016374 76 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 155 (390)
Q Consensus 76 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 155 (390)
+..-.+.++..+...+...++..|..++++++...+....+..+|..+|+...+++.+++|||..|++.+++.++..+..
T Consensus 101 ~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~ 180 (390)
T TIGR02718 101 VGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCV 180 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 44555566677777888888889988888889998999999999999999999999999999999999998887766555
Q ss_pred HhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCccc
Q 016374 156 LSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT 235 (390)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 235 (390)
++..|++++++ +.+++ +..++++.+|+|.++......++..........+.+.|++| .|++++
T Consensus 181 ~~~~~~~~~~~-~~~~~---------------~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~ 243 (390)
T TIGR02718 181 LWLKDRAVASP-EAPLA---------------RRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLE 243 (390)
T ss_pred HHcCCCCcCcc-ccchh---------------hHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHH
Confidence 54444432211 10000 02245678899998888888888888888888899999998 699999
Q ss_pred chhhhhhHhHH-HHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHH-HHHHHHHH-Hh--cCCchHHHHHHHHHH-hh
Q 016374 236 ESGLFCVLPWL-TMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL-GPAFFLTQ-LS--HVDSPAMAVLCMACS-QG 309 (390)
Q Consensus 236 ~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~--~~~~~~~~~~~~~~~-~~ 309 (390)
+.+........ ..+++..+.|++.||+++|+....+ .... ........ .. ..+..........++ ..
T Consensus 244 ~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (390)
T TIGR02718 244 WIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILG-------VGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLI 316 (390)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH-------HHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHH
Confidence 99998887764 6667789999999999998543221 1111 11111111 11 112222222222222 22
Q ss_pred hccccccccchhccccCC-CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 016374 310 TDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAV 378 (390)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 378 (390)
.+...........+..++ +++++.+++.+...++|..++|.+.|.+.|+.|++..|+..+++.+++...
T Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 317 TGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 222222333333455555 789999999999999999999999999999999999999888777766543
No 88
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.97 E-value=5e-28 Score=224.41 Aligned_cols=374 Identities=15% Similarity=0.145 Sum_probs=245.1
Q ss_pred ccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhh-hhhHHHHHHHHHHHHHHHHHhhhhhhhhHHH-HHHHHHHH
Q 016374 5 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIATALTPVAAKLGLPF-LLVVRVFM 82 (390)
Q Consensus 5 lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~-l~~~r~l~ 82 (390)
...+++++|.++++.+++.+.+.....+..+++|+++|| +||||+++.+.++++++.+.+++++ +... ++++|+++
T Consensus 38 ~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~--~~~~ll~~~~~l~ 115 (489)
T PRK10207 38 AVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSL--LKPDLIFIALGTI 115 (489)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhc--cchhHHHHHHHHH
Confidence 344678899999999999999999999999999999999 9999999999999999999999987 5444 55889999
Q ss_pred hhccccchhhhhHHhhhcccCC--chhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhcc
Q 016374 83 GIGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 160 (390)
Q Consensus 83 G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 160 (390)
|+|.|...+...+++.|.+|++ +|++++++++.+.++|..+||.+++++.+++|||+.|++.++ +.+..++.+...+
T Consensus 116 ~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~~~~ 194 (489)
T PRK10207 116 AVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYFACR 194 (489)
T ss_pred HhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHcc
Confidence 9999999999999999999877 457899999999999999999999999999999999998654 3333333332223
Q ss_pred CCCCCC---C-CCchhhhhhh------------hhc-ccCCCCC-----------------CcchhhhhhcCchhHHHHH
Q 016374 161 SSPAED---P-QLRPAEKKLI------------VSS-CASKEPV-----------------KTIPWGLILSKPPVWALIV 206 (390)
Q Consensus 161 ~~~~~~---~-~~~~~~~~~~------------~~~-~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~ 206 (390)
+..++. + +.+.+..... ... .+..+.. .....++..|+|.+....+
T Consensus 195 ~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~~~~~l 274 (489)
T PRK10207 195 GMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMFVAFVL 274 (489)
T ss_pred hhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 211110 1 1001100000 000 0000000 0000013455555443332
Q ss_pred H--HHHHHHHHHHHhhchHHHHhHhcCCcc----cchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 016374 207 S--HFCHNWGTFILLTWMPTYYNQVLHFNL----TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG 280 (390)
Q Consensus 207 ~--~~~~~~~~~~~~~~~~~~l~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 280 (390)
. ....+..+....+.++.+.++..+.+. .....+.....+..++.+++.+++.||.++|+.......+...+..
T Consensus 275 ~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~ 354 (489)
T PRK10207 275 MLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMF 354 (489)
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHH
Confidence 2 444555566666778888875333321 1123344445566778888899999999988642111111222111
Q ss_pred HHHHHHHH-----HHHh-c---CCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHH
Q 016374 281 FLGPAFFL-----TQLS-H---VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAA 351 (390)
Q Consensus 281 ~~~~~~~~-----~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i 351 (390)
+...+... .... . .+.++......+.+.+.....++......+..|++.+|.++|+.+...++|+.++..+
T Consensus 355 l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l 434 (489)
T PRK10207 355 LCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYV 434 (489)
T ss_pred HHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111110 1111 1 1234445566667777777777777777888888999999999999999999999988
Q ss_pred HHHHHh----------cCCchhHHHHHHHHHHHHHHHHHH
Q 016374 352 TGYILQ----------HGSWDDVFKVSVGLYLVGTAVWNL 381 (390)
Q Consensus 352 ~g~l~~----------~~g~~~~~~~~~~~~~~~~~~~~~ 381 (390)
...... ...+...|...+...++..++.+.
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 435 ATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred HHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 875531 112556676666666655555444
No 89
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.97 E-value=1.1e-28 Score=208.33 Aligned_cols=351 Identities=17% Similarity=0.071 Sum_probs=232.0
Q ss_pred cCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhh
Q 016374 14 WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAM 93 (390)
Q Consensus 14 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 93 (390)
.+....|.+.+.+++.+.+.++.+|.++||+|||++++.+....+++..+.+.++ |+..+.++|++.|+.-| .....
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~--~F~afv~aR~l~Gi~kg-nl~v~ 141 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR--NFAAFVLARFLGGIFKG-NLSVI 141 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhhccC-chHHH
Confidence 3456679999999999999999999999999999999999999999999999999 99777777999999987 56778
Q ss_pred hHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhh---hcCChHHHHHHH----HHHHHHHHHHHhhccCCCCCC
Q 016374 94 NNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH---RFGWPSVFYSFG----SLGTVWFTVWLSKAHSSPAED 166 (390)
Q Consensus 94 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---~~gw~~~f~~~~----~~~~~~~~~~~~~~~~~~~~~ 166 (390)
.++++|..++|+|++.++.....+++|.++||.+|+++.+ ..| +.+|.... +..........++.||+-+.+
T Consensus 142 rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~r 220 (451)
T KOG2615|consen 142 RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLR 220 (451)
T ss_pred HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccccch
Confidence 8999999999999999999999999999999999999987 222 12222211 122221234456677775544
Q ss_pred CCCchhh-hhhhhhcccCCCCCCcchhhhhhcCchhH-------HHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchh
Q 016374 167 PQLRPAE-KKLIVSSCASKEPVKTIPWGLILSKPPVW-------ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESG 238 (390)
Q Consensus 167 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 238 (390)
++.+++. ..+..+++++....+...-...+||+... ...+-.+.....+..+..+.+.+..+.+|+++.+.|
T Consensus 221 k~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G 300 (451)
T KOG2615|consen 221 KRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQG 300 (451)
T ss_pred hhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhhe
Confidence 4431111 01000011000000000011234444322 233444445555555555555555677899999999
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhcccccccc
Q 016374 239 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGL 318 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (390)
.+++..++.+.+.+....+..||.+.. ........+..+...+.................+-.+......+..
T Consensus 301 ~vl~~tGl~m~~~ql~~~~~l~~~~~~-------~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~L 373 (451)
T KOG2615|consen 301 KVLSTTGLLMLVIQLALVPILPRYKGN-------IKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTCL 373 (451)
T ss_pred eeeehhhHHHHHHHHhccccccccccc-------hhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHHH
Confidence 999999888888888777777776522 1133334444444444444444444443333333333333444444
Q ss_pred chh-ccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCchhHHHHHHHHHHHH
Q 016374 319 YSN-HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVG 375 (390)
Q Consensus 319 ~~~-~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~-~g~~~~~~~~~~~~~~~ 375 (390)
... ....++++||+.+|+..+.+.++.++||.+.|.+..+ .+-+..+..-+.+.+..
T Consensus 374 t~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~L~~~~ 432 (451)
T KOG2615|consen 374 TSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGALLLIP 432 (451)
T ss_pred HHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHHHHHHH
Confidence 444 4555568999999999999999999999999988776 33344444333333333
No 90
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=6.2e-27 Score=219.90 Aligned_cols=363 Identities=16% Similarity=0.104 Sum_probs=248.6
Q ss_pred chHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhhhHH
Q 016374 17 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNI 96 (390)
Q Consensus 17 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 96 (390)
.+.+|+.+.+.++..+++++.|+++|++|||+.++.+.+.+.++.+++++++ |+++++++|+++|+|.|......+.+
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~--~~~~l~~GR~l~G~g~G~~~~~~piy 166 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP--SWYQLIVGRILTGLGVGGASVLAPVY 166 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHhccchhhhhhcchhh
Confidence 3559999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred hhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhh-cCChHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchhhh-
Q 016374 97 LSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEK- 174 (390)
Q Consensus 97 i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 174 (390)
++|..|++.||...+..+....+|..++..++....+. ++||..+.+..+++++..+. ..+.||+|+.-.+..+.++
T Consensus 167 ~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a 245 (513)
T KOG0254|consen 167 ISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEA 245 (513)
T ss_pred HhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHH
Confidence 99999999999999999999999999996655555443 58999999988888888777 7888998874322111111
Q ss_pred hhhhhc-c--------------------cCCCCCCcchhhhhhc----CchhHHHHHHHHHHHHHHHHHhhchHHHHhHh
Q 016374 175 KLIVSS-C--------------------ASKEPVKTIPWGLILS----KPPVWALIVSHFCHNWGTFILLTWMPTYYNQV 229 (390)
Q Consensus 175 ~~~~~~-~--------------------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 229 (390)
+..... . +.+....+..++++++ ++.+....+..+....+......|.+.++++.
T Consensus 246 ~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~ 325 (513)
T KOG0254|consen 246 KRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA 325 (513)
T ss_pred HHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc
Confidence 000000 0 0000011112333332 22333444455555556677788888888884
Q ss_pred cCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcC------CchHHHHHH
Q 016374 230 LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV------DSPAMAVLC 303 (390)
Q Consensus 230 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 303 (390)
|.+... .......++...++..+...+.||.|||+....+. ..+..+++..+......... .........
T Consensus 326 -g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~--~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (513)
T KOG0254|consen 326 -GLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGA--AGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFL 401 (513)
T ss_pred -CCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhH--HHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHH
Confidence 665443 45556667788888888899999999997766654 23333333333332222111 122223333
Q ss_pred HHHHhhhccccccccchhccccCC-CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH-HHHH
Q 016374 304 MACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTA-VWNL 381 (390)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~-~~~~ 381 (390)
.+....+.....+....+..|..| +.|+.+.++........+.+-......+.+..+....|......+.+... ...+
T Consensus 402 ~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~ 481 (513)
T KOG0254|consen 402 CLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFF 481 (513)
T ss_pred HHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheE
Confidence 333444444444555556566666 89999999999999998887777777776665434444444444444444 3333
Q ss_pred hhcCC
Q 016374 382 FSTGE 386 (390)
Q Consensus 382 ~~~~~ 386 (390)
..+++
T Consensus 482 ~~pET 486 (513)
T KOG0254|consen 482 FVPET 486 (513)
T ss_pred EcccC
Confidence 43433
No 91
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=9.4e-27 Score=195.56 Aligned_cols=369 Identities=15% Similarity=0.152 Sum_probs=252.8
Q ss_pred cccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHh
Q 016374 4 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMG 83 (390)
Q Consensus 4 ~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 83 (390)
..|...+.++.+..+..+++.....+..+++..+|..+|++|||+......+...+...+.+.++ |+..+.+.|.+.|
T Consensus 100 i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~sp--nf~~L~~f~~l~~ 177 (528)
T KOG0253|consen 100 ILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASP--NFASLCVFRALWG 177 (528)
T ss_pred HHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCC--CeehhhHHHHHHh
Confidence 45777888999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred hccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCCC
Q 016374 84 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 163 (390)
Q Consensus 84 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (390)
+|.|. .|...++-.|..|..+|...+-.. ..+.+|.+....+.-....++||||.....+.+..+. ....++.+|+|
T Consensus 178 ~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~-a~f~~w~~ESp 254 (528)
T KOG0253|consen 178 FGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFA-ARFLVWVYESP 254 (528)
T ss_pred ccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHH-HHHHhhcccCc
Confidence 99998 888889999999999999887777 9999999999999999999999999888777544444 45667789998
Q ss_pred CCCCCCchhhhhh-----h----------------------hhc-----cc-CCCCCCcchhhhhhc---CchhHHHHHH
Q 016374 164 AEDPQLRPAEKKL-----I----------------------VSS-----CA-SKEPVKTIPWGLILS---KPPVWALIVS 207 (390)
Q Consensus 164 ~~~~~~~~~~~~~-----~----------------------~~~-----~~-~~~~~~~~~~~~~~~---~~~~~~~~~~ 207 (390)
+-.-.+.++++.. + +++ .+ ...++...+..+++. +++...+...
T Consensus 255 Rf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~i 334 (528)
T KOG0253|consen 255 RFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRI 334 (528)
T ss_pred chhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHH
Confidence 7432222111110 0 000 00 000111112222222 1223344444
Q ss_pred HHHHHHHHHHHhhchHHHHhHh-----------------cCCcccch-hh-hhhHhHHHHHHHHHHHHHHHHHHHhcCCc
Q 016374 208 HFCHNWGTFILLTWMPTYYNQV-----------------LHFNLTES-GL-FCVLPWLTMAFSANLGGWIADTLVSKGLS 268 (390)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~l~~~-----------------~g~~~~~~-~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 268 (390)
.+...+.+++.........+.. .+-..... .+ =.....+....|.++.+++.||+|||+.
T Consensus 335 wfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkT- 413 (528)
T KOG0253|consen 335 WFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKT- 413 (528)
T ss_pred HHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhH-
Confidence 5555555655554444444432 11111111 11 1344567889999999999999999943
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchhccccCC-CcchhHHHHHHHHHHHHHHH
Q 016374 269 VTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVF 347 (390)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i 347 (390)
++.+++..++++.........-......+.+-.+........+.+..|+.| +.|+++.|.+.....+|+++
T Consensus 414 --------Mal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~ 485 (528)
T KOG0253|consen 414 --------MALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIF 485 (528)
T ss_pred --------HHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhh
Confidence 333444444444333333332233344444444555556777888888877 68999999999999999999
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh--hcCCCc
Q 016374 348 GTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF--STGEKV 388 (390)
Q Consensus 348 g~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 388 (390)
.|.++ +....+...+..+.+.+++++.++..++ +++.|+
T Consensus 486 ~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~ 526 (528)
T KOG0253|consen 486 SPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRS 526 (528)
T ss_pred hhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCC
Confidence 99999 4433444455566666666666665555 444443
No 92
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.95 E-value=5e-26 Score=209.66 Aligned_cols=345 Identities=13% Similarity=0.130 Sum_probs=245.1
Q ss_pred cccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHh
Q 016374 4 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMG 83 (390)
Q Consensus 4 ~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 83 (390)
.++.+.+|+| +..+..|+.+.+.++.++..++.|+++|.+|||..++.+.++..+|.++++.++ |...++.+..+.|
T Consensus 66 ~l~~I~~diG-~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~--~~~~~iag~~l~G 142 (599)
T PF06609_consen 66 ILPYINADIG-GSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQ--NMNTFIAGMVLYG 142 (599)
T ss_pred HHHHHHHhcC-CCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCC--cHHHHHHHHHHHH
Confidence 4577889998 457889999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred hccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCCC
Q 016374 84 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 163 (390)
Q Consensus 84 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (390)
+|.|... .....++|..|.|.|....++.....-+....++.++..+..+.+|||.|++..+...+.++...++.++++
T Consensus 143 vgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~ 221 (599)
T PF06609_consen 143 VGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPP 221 (599)
T ss_pred HhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 9977554 456668999999999988887777666666678888877777779999999998877776654444433333
Q ss_pred CCCC--CC-c-hhhhhhh------------------------h-hccc---------------------C-C-CCCCcch
Q 016374 164 AEDP--QL-R-PAEKKLI------------------------V-SSCA---------------------S-K-EPVKTIP 191 (390)
Q Consensus 164 ~~~~--~~-~-~~~~~~~------------------------~-~~~~---------------------~-~-~~~~~~~ 191 (390)
+++. +. . +++-++. . .+.+ + . .++.+.-
T Consensus 222 ~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~ 301 (599)
T PF06609_consen 222 RAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLF 301 (599)
T ss_pred hhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcC
Confidence 2211 11 1 1111110 0 0000 0 0 0111122
Q ss_pred hhhhhcC-chhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCccc---chhhhhhHhHHHHHHHHHHHHHHHHHHHhcCC
Q 016374 192 WGLILSK-PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT---ESGLFCVLPWLTMAFSANLGGWIADTLVSKGL 267 (390)
Q Consensus 192 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 267 (390)
..+++|+ |.+...++..++..+.++....+.|......++-++. ..++.....+++...+..+.+.+..|.+|-|.
T Consensus 302 P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw 381 (599)
T PF06609_consen 302 PHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKW 381 (599)
T ss_pred CHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhH
Confidence 3357777 4566666777788888888888999988887777653 56778888889999999999999998876654
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHH
Q 016374 268 SVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVF 347 (390)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i 347 (390)
... .....+......+.....++.........+.+.+.+....+......-..|+++.|++.|+..+++.+|+.+
T Consensus 382 ~li-----~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsI 456 (599)
T PF06609_consen 382 QLI-----FGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSI 456 (599)
T ss_pred HHH-----HHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHH
Confidence 321 111111111112222223333333444555566666666566555556677789999999999999999999
Q ss_pred HHHHHHHHHh
Q 016374 348 GTAATGYILQ 357 (390)
Q Consensus 348 g~~i~g~l~~ 357 (390)
|..+...+..
T Consensus 457 g~aIy~~I~~ 466 (599)
T PF06609_consen 457 GYAIYNAIFT 466 (599)
T ss_pred HHHHHHHHHH
Confidence 9998877664
No 93
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.95 E-value=1.5e-25 Score=198.60 Aligned_cols=340 Identities=12% Similarity=0.068 Sum_probs=241.2
Q ss_pred cccccccccccCcCcch-HHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Q 016374 2 SIAILPMSAEFNWNPAT-VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 80 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~-~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 80 (390)
+++.|.+.+|+|+|++| .|.+.+++..++++..++.|+++||+|.|+++..+.+.+++.+++.++++ ++..+.+.|+
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~--Sl~~L~i~R~ 123 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT--SVWHMQLMEV 123 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 45678899999999999 99999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHH--HHHHHHHHHHHhh
Q 016374 81 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG--SLGTVWFTVWLSK 158 (390)
Q Consensus 81 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~--~~~~~~~~~~~~~ 158 (390)
+.|++.|... +...++.+|+|+++|+++.++..++..+|.++++++++. ...+|||+-+.+.- ..+.....++.++
T Consensus 124 llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~ 201 (511)
T TIGR00806 124 FYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALF 201 (511)
T ss_pred HHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999988 999999999999999999999999999999999999999 55689998654432 2222333344455
Q ss_pred ccCCCCC---CCCC-ch-h---hhhhhhhccc-CCC--CCC---------cchhhhhhcCchhHHHHHHHHHHHHHHHHH
Q 016374 159 AHSSPAE---DPQL-RP-A---EKKLIVSSCA-SKE--PVK---------TIPWGLILSKPPVWALIVSHFCHNWGTFIL 218 (390)
Q Consensus 159 ~~~~~~~---~~~~-~~-~---~~~~~~~~~~-~~~--~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (390)
+|..++. +++. .+ . +.+....+.. ++. ++. ..++++..+||.+....+-+.+...+++.+
T Consensus 202 LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv 281 (511)
T TIGR00806 202 LKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLI 281 (511)
T ss_pred CCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHH
Confidence 5543331 0000 00 0 0000000000 000 000 112344567888888888888888888888
Q ss_pred hhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchH
Q 016374 219 LTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA 298 (390)
Q Consensus 219 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (390)
..|.....++..+-++...|..-+...+.+.+..+..|++-.+..+. ....+.+...+.+..+......++.+
T Consensus 282 ~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~-------~~l~l~v~s~~~~gll~~m~~t~~Iw 354 (511)
T TIGR00806 282 TYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW-------SKLLIAVVSAIQAGLVFWMSQSHDIW 354 (511)
T ss_pred HHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh-------HHHHHHHHHHHHHHHhhhhhcccchH
Confidence 88888887775342233566667777777888888888875444322 12444444444455555555666666
Q ss_pred HHHHHH-HHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 016374 299 MAVLCM-ACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAAT 352 (390)
Q Consensus 299 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~ 352 (390)
...... ++...+..........+......|.-|...|+.++...+-+.+-..+.
T Consensus 355 ~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iV 409 (511)
T TIGR00806 355 VLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITAVV 409 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEEE
Confidence 655444 444444444444455556666667789999998887777776665543
No 94
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=1.7e-24 Score=204.55 Aligned_cols=331 Identities=15% Similarity=0.096 Sum_probs=227.4
Q ss_pred cccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccc
Q 016374 10 AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVA 89 (390)
Q Consensus 10 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 89 (390)
+.+..+.....+..+++.+|..+|++++|+++||+|||++++.+.++..++.+..++++ |++.+++.|+++|++.+..
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~--~~~~~~~~Rfl~G~~~~~~ 188 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP--NYWMFLIFRFLSGFFGSGP 188 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC--cHHHHHHHHHHHHhhccch
Confidence 44566778889999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 016374 90 MPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQL 169 (390)
Q Consensus 90 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (390)
......++.|+.++|+|+.+..+ ......+..++++.++++.+ +||+.+++..++.++..++ +++.+|+|+.....
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~ 264 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSK 264 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHc
Confidence 99999999999999999999999 88888888888888888887 8999999999988877655 56666888743222
Q ss_pred chhhh-hhhhhc-----------------------ccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHH
Q 016374 170 RPAEK-KLIVSS-----------------------CASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 225 (390)
Q Consensus 170 ~~~~~-~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (390)
.+.++ .+..++ ......+++..+.++++.|++....+...+..+.......-++..
T Consensus 265 g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~ 344 (521)
T KOG0255|consen 265 GRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLN 344 (521)
T ss_pred CchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhh
Confidence 21111 000000 000011122345667777765554444444443333333333333
Q ss_pred HhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCch-HHHHHHH
Q 016374 226 YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP-AMAVLCM 304 (390)
Q Consensus 226 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 304 (390)
..+ +|.+. .......+..........+...|+.|||.. ..........+............ +......
T Consensus 345 ~~~-lg~~~---~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (521)
T KOG0255|consen 345 VSG-LGGNI---YLNFTLSGLVELPAYFRNGLLLPEFGRRPP-------LFLSLFLAGIGLLLFGWLPDDLGGWLHWILP 413 (521)
T ss_pred hhh-cCchH---HHHHHHHHHHHhhHHHHHHHHHHHhCcHHH-------HHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Confidence 333 34432 233444445777777788899999988832 22222222222222222222222 2333344
Q ss_pred HHHhhhccccccccchhccccCC-CcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016374 305 ACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQ 357 (390)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~ 357 (390)
.++.+..............|..| ..|+.+.+..+....++.+++|.+.-....
T Consensus 414 ~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 414 LLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44444444444444666666666 689999999999999999999998865544
No 95
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.94 E-value=8.9e-24 Score=190.12 Aligned_cols=357 Identities=13% Similarity=0.131 Sum_probs=246.3
Q ss_pred cccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhh-hHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Q 016374 4 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG-GKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFM 82 (390)
Q Consensus 4 ~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-rr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 82 (390)
.+|..-++.|.|.+|+|.+.+...+...+.++++|.++||++ +||.+.+..++.++........+ +++.++..-++.
T Consensus 24 ~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~--~f~~~~~~~~l~ 101 (400)
T PF03825_consen 24 YLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSS--SFWWLFVIMLLF 101 (400)
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHH
Confidence 345667888999999999999999999999999999999986 67778777777777776777777 888888888888
Q ss_pred hhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhh-HHHHhhhcC---ChHHHHHHHHHHHHHHHHHHhh
Q 016374 83 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAF-SPFLIHRFG---WPSVFYSFGSLGTVWFTVWLSK 158 (390)
Q Consensus 83 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~-~~~l~~~~g---w~~~f~~~~~~~~~~~~~~~~~ 158 (390)
.+......|...++..+..+ ++++-.|......++|..++... +..+....+ ....+++.+...++.... .+.
T Consensus 102 ~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~-~l~ 178 (400)
T PF03825_consen 102 SFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGF-ALF 178 (400)
T ss_pred HHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHH-HHh
Confidence 88877788888888888774 44555667777778887777544 233333333 234566655555444333 334
Q ss_pred ccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchh
Q 016374 159 AHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESG 238 (390)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 238 (390)
.|+.|++++.+++.+ +....+..+++|+|++....+..++........+.+.+.|++|..|.+....+
T Consensus 179 lp~~~~~~~~~~~~~------------~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g 246 (400)
T PF03825_consen 179 LPKTPPKRSAKESVK------------KLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIG 246 (400)
T ss_pred CCCCccccccCCCcc------------cccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHH
Confidence 465552222111110 00122334689999999999999999999999999999999996447778888
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhc--CCchHHHHHH----HHHHhhhcc
Q 016374 239 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH--VDSPAMAVLC----MACSQGTDA 312 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~ 312 (390)
...+...+++++.-...+++.+|+|.+ .++.++....++=...... ++.+...... .+-+..++.
T Consensus 247 ~~~~l~~~aEi~~f~~~~~~~~r~g~~---------~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~ 317 (400)
T PF03825_consen 247 ILWALGVVAEIPFFFFSGRFLKRFGIK---------WLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGL 317 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHH---------HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHH
Confidence 888888899999999999999999988 3333333333332222222 2323222222 234666666
Q ss_pred ccccccchhccccCCCcchhHHHHHHHH-HHHHHHHHHHHHHHHHhcCCchh------HHHHHHHHHHHHHHHHHHhhcC
Q 016374 313 FSQSGLYSNHQDIAPRYSGVLLGLSNTA-GVLAGVFGTAATGYILQHGSWDD------VFKVSVGLYLVGTAVWNLFSTG 385 (390)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~g~~ig~~i~g~l~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
..........+..|++.|+++.++++.. ..+|..+|..++|+++|+.|.+. .+.+.+++.++..+++++..|+
T Consensus 318 ~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 318 FHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 6566666666777889999999998876 57899999999999999976554 3444444444444454444444
Q ss_pred C
Q 016374 386 E 386 (390)
Q Consensus 386 ~ 386 (390)
+
T Consensus 398 ~ 398 (400)
T PF03825_consen 398 K 398 (400)
T ss_pred C
Confidence 3
No 96
>PTZ00207 hypothetical protein; Provisional
Probab=99.94 E-value=4.8e-24 Score=197.92 Aligned_cols=371 Identities=14% Similarity=0.087 Sum_probs=262.0
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhh------hhhhHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA------AKLGLPFL 75 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~~~l 75 (390)
++..|++++++|+|..+++++.+.. .....++++.|++.||+|||+++.++.+++.++.++++++ + +++.+
T Consensus 47 sv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~--s~~~l 123 (591)
T PTZ00207 47 NLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEG--SVVRL 123 (591)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccC--cHHHH
Confidence 3456889999999999999998874 4456678889999999999999999999999999999997 5 79999
Q ss_pred HHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHH
Q 016374 76 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 155 (390)
Q Consensus 76 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 155 (390)
++.|++.|+|.+...+.....+.+|+| ++||++.|+...+.++|..+.+.+...+.+ .+|+..|++.+++.++..++.
T Consensus 124 ~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~ 201 (591)
T PTZ00207 124 SVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILA 201 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888999999999995 889999999999999999864444443333 368889999888888877777
Q ss_pred HhhccCCCCCCC-----CCchhhhh-----------------h-------------------------------------
Q 016374 156 LSKAHSSPAEDP-----QLRPAEKK-----------------L------------------------------------- 176 (390)
Q Consensus 156 ~~~~~~~~~~~~-----~~~~~~~~-----------------~------------------------------------- 176 (390)
..+.+++|.+.. +.+++++. .
T Consensus 202 ~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~ 281 (591)
T PTZ00207 202 IVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAV 281 (591)
T ss_pred HhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 766665543211 11122211 0
Q ss_pred --h------h--------------h-ccc-------------------------C-CCCCCcchhhhhhcCchhHHHHHH
Q 016374 177 --I------V--------------S-SCA-------------------------S-KEPVKTIPWGLILSKPPVWALIVS 207 (390)
Q Consensus 177 --~------~--------------~-~~~-------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~ 207 (390)
. . + +.+ + ..|....++.+.+++..+|.+...
T Consensus 282 v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~ 361 (591)
T PTZ00207 282 TVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWS 361 (591)
T ss_pred HHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHH
Confidence 0 0 0 000 0 001111256677788899999999
Q ss_pred HHHHHHHHHHHhhchHHHHhHhcCCcccc--hhhhhhHhHHHHHHHHHHHHHHHHHHHhcC----CchhHHHHHHHHHHH
Q 016374 208 HFCHNWGTFILLTWMPTYYNQVLHFNLTE--SGLFCVLPWLTMAFSANLGGWIADTLVSKG----LSVTTVRKIMQSIGF 281 (390)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~l~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~----~~~~~~~~~~~~~~~ 281 (390)
.++...........+.+..+..-|.+.++ ...+.++.++.+.+|++..|.+.....+|+ ..+. ..+.+..
T Consensus 362 ~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt----~~l~~~~ 437 (591)
T PTZ00207 362 IFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPIT----IALFIPS 437 (591)
T ss_pred HHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchh----HHHHHHH
Confidence 99999888888999999988843663333 333788899999999999999884444443 2221 2222222
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHH-HHHHHHHHhcC-
Q 016374 282 LGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFG-TAATGYILQHG- 359 (390)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig-~~i~g~l~~~~- 359 (390)
+.....+......+...+.+...+.+.+.+.. .+....+.+|.+.|+-|+-+-+.....-+|..+- -.+.|.++|+.
T Consensus 438 ~~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~-~~~~~~i~selFgk~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea 516 (591)
T PTZ00207 438 VCIITMLTLFLTLPKAALPLPYFIAAFANGFM-AATIALVTRTIFAKDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQA 516 (591)
T ss_pred HHHHHHHHHHHHCCccHhHHHHHHHHHHhhHh-HHHHHHHHHHHhccchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222222245556666666666654 4455555555655888988888888888887776 67889999861
Q ss_pred ---------C---chhHHHHHHHHHHHHHHHHHHh
Q 016374 360 ---------S---WDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 360 ---------g---~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
| ++..|++.+.+++.+.++...+
T Consensus 517 ~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 517 DKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred hhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhe
Confidence 1 6788999988888888776554
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.94 E-value=9.9e-24 Score=196.90 Aligned_cols=369 Identities=15% Similarity=0.118 Sum_probs=227.2
Q ss_pred cccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhh-hhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhh
Q 016374 6 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGI 84 (390)
Q Consensus 6 p~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 84 (390)
+.+++++|+|+++.+++.+.+........+++|+++|| +|||+.+..+.++.+++..+++++++ +.+.+.++|+++|+
T Consensus 46 ~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~-~~~~l~~~~~l~gi 124 (500)
T PRK09584 46 VYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGH-DAGIVYMGMATIAV 124 (500)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHH
Confidence 34568899999999999888887777777899999999 59999999999999999999988752 45667788999999
Q ss_pred ccccchhhhhHHhhhcccCCc--hhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHH---HHHhhc
Q 016374 85 GEGVAMPAMNNILSKWVPVAE--RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT---VWLSKA 159 (390)
Q Consensus 85 ~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~---~~~~~~ 159 (390)
+.|...+...+++.|++|+++ |++++++.+.+.++|..+||.+++++.+++|||+.|.+.++..++..+ ......
T Consensus 125 g~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~ 204 (500)
T PRK09584 125 GNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWV 204 (500)
T ss_pred hhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHh
Confidence 999888999999999997653 456889999999999999999999999999999999987754444332 222333
Q ss_pred cCCCCCCCCCchhhhhhh-----------hhc--ccCCCCCC-----------------cchhhhhhcCchhHHHHHHHH
Q 016374 160 HSSPAEDPQLRPAEKKLI-----------VSS--CASKEPVK-----------------TIPWGLILSKPPVWALIVSHF 209 (390)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~-----------~~~--~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~ 209 (390)
+|.+++.++.+.+..... ... ...++... ..+.++.-| ++.+.. +..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~ 282 (500)
T PRK09584 205 KQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGAAR-RKMIVA-FILM 282 (500)
T ss_pred ccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHHH-HHHHHH-HHHH
Confidence 332211111000100000 000 00000000 000011111 222222 2222
Q ss_pred HHHHHHHHHhhchHHHHhH--hcCCcc------cchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Q 016374 210 CHNWGTFILLTWMPTYYNQ--VLHFNL------TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGF 281 (390)
Q Consensus 210 ~~~~~~~~~~~~~~~~l~~--~~g~~~------~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 281 (390)
.....++......|.++.+ ..+.+. ...+.+.+...+..++..++..++-+|.++|.... .+...+..+
T Consensus 283 ~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~---~~~~~G~~l 359 (500)
T PRK09584 283 LEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMP---HKFAIGMVL 359 (500)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcH---HHHHHHHHH
Confidence 3344445555555555443 111111 22556667777777788788777777776663221 122222222
Q ss_pred HHHHHHHHHHhc--------CCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 016374 282 LGPAFFLTQLSH--------VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATG 353 (390)
Q Consensus 282 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g 353 (390)
...+........ .+.++......+.+.+.....+.......+..|++.||+.+|.......+|..++..+.+
T Consensus 360 ~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 360 CSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred HHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222221111 113355566666777777776666666777778899999999877666666666666654
Q ss_pred HHHh----------cCCchhHHHHHHHHHHHHHHHHH
Q 016374 354 YILQ----------HGSWDDVFKVSVGLYLVGTAVWN 380 (390)
Q Consensus 354 ~l~~----------~~g~~~~~~~~~~~~~~~~~~~~ 380 (390)
.... ..++...|...++..++..++.+
T Consensus 440 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~ 476 (500)
T PRK09584 440 LMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLML 476 (500)
T ss_pred HhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 3221 12467778777766654444333
No 98
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.94 E-value=6.3e-31 Score=244.41 Aligned_cols=364 Identities=17% Similarity=0.151 Sum_probs=241.9
Q ss_pred chHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh-hHHHHHHHHHHHhhccccchhhhhH
Q 016374 17 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL-GLPFLLVVRVFMGIGEGVAMPAMNN 95 (390)
Q Consensus 17 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~ 95 (390)
.+.++..+...++..+|+++.|+++||+|||+.+..+.++..++.++.++++.. |++.+.++|+++|++.|...+....
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 467899999999999999999999999999999999999999999999998733 6789999999999999999999999
Q ss_pred HhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhc---CChHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchh
Q 016374 96 ILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF---GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPA 172 (390)
Q Consensus 96 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (390)
++.|..|+++|++..++.+....+|..++..++..+.+.. +||..+.+..++.++..+ ...+.||+|+.-..++++
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pESP~wL~~~~~~ 204 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPESPRWLLSKGRD 204 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccceecccccc
Confidence 9999999999999999999999999999988876664433 499999988888876554 446779998743222211
Q ss_pred hhhhh-----------hhcccC----C--CCCCcchhhhhhcCch----hHHHHHHHHHHHH-HHHHHhhchHHHHhHhc
Q 016374 173 EKKLI-----------VSSCAS----K--EPVKTIPWGLILSKPP----VWALIVSHFCHNW-GTFILLTWMPTYYNQVL 230 (390)
Q Consensus 173 ~~~~~-----------~~~~~~----~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~ 230 (390)
++.+. +++.++ . +++++..+++++++++ ............. +......+.|.++++ .
T Consensus 205 ~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~ 283 (451)
T PF00083_consen 205 EEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-A 283 (451)
T ss_pred cccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccc-c
Confidence 11000 000000 0 0001133556666643 2222222222222 234445556666655 5
Q ss_pred CCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCC----chHHHHHHHHH
Q 016374 231 HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD----SPAMAVLCMAC 306 (390)
Q Consensus 231 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 306 (390)
+.+.. -.......+...++.++...+.||+|||+....+. ....++....+ ......... .........+.
T Consensus 284 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~l~ 358 (451)
T PF00083_consen 284 GISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGL--LLMAICSLILG-IIFFLGVSSSSWWSILSIVFLALF 358 (451)
T ss_pred ccccc--ccccccccccccccccccccccccccccccccccc--ccccccccccc-cccccccccccccccccceeeeec
Confidence 66655 22334445666777778889999999997655432 11111111111 001111111 12222222222
Q ss_pred HhhhccccccccchhccccCC-CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhcC
Q 016374 307 SQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTG 385 (390)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
.........+....+..|..| +.|+++.|+....+.+++.++|.+...+.+..+....+.+.+.++++..+..+++.++
T Consensus 359 ~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpE 438 (451)
T PF00083_consen 359 FAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPE 438 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEee
Confidence 233333334555455555555 8999999999999999999999999998888775566666666666666655555444
Q ss_pred CC
Q 016374 386 EK 387 (390)
Q Consensus 386 ~~ 387 (390)
+|
T Consensus 439 T~ 440 (451)
T PF00083_consen 439 TK 440 (451)
T ss_pred CC
Confidence 43
No 99
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.93 E-value=2.1e-25 Score=193.05 Aligned_cols=359 Identities=16% Similarity=0.166 Sum_probs=249.4
Q ss_pred cCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh-----hHHHHHHHHHHHhhcccc
Q 016374 14 WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL-----GLPFLLVVRVFMGIGEGV 88 (390)
Q Consensus 14 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~r~l~G~~~~~ 88 (390)
.++...+.+..+..+|..+|+++.|++.||+|||+++...++++.+++++++++... -..++...|++.|+|.|+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGG 160 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGG 160 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccC
Confidence 455667888899999999999999999999999999999999999999988776421 247788899999999999
Q ss_pred chhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhh---------------cCChHHHHHHHHHHHHHHH
Q 016374 89 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR---------------FGWPSVFYSFGSLGTVWFT 153 (390)
Q Consensus 89 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~---------------~gw~~~f~~~~~~~~~~~~ 153 (390)
.+|...++.+|...+++||...+...+..+.|.+.|.+++-.+... .=||..|.+.+++++..+
T Consensus 161 DYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~l- 239 (538)
T KOG0252|consen 161 DYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVL- 239 (538)
T ss_pred CCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999988888777655421 129999988777766654
Q ss_pred HHHhhccCCCCCCCCCchh-------hhhh----hhhcc--cCCCCCCcc---hhhhhhcC---chhHHHHHHHHHHHHH
Q 016374 154 VWLSKAHSSPAEDPQLRPA-------EKKL----IVSSC--ASKEPVKTI---PWGLILSK---PPVWALIVSHFCHNWG 214 (390)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~-------~~~~----~~~~~--~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~ 214 (390)
......||+++-+....++ .++. ..++. +...+.++. .+.+.+.. ++....+..+++.-.+
T Consensus 240 y~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDia 319 (538)
T KOG0252|consen 240 YFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIA 319 (538)
T ss_pred HhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 3444556665432000000 0000 00000 000111111 12222222 3555667778888888
Q ss_pred HHHHhhchHHHHhHhcCCcccchhh--------hhhHhH-HHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 016374 215 TFILLTWMPTYYNQVLHFNLTESGL--------FCVLPW-LTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA 285 (390)
Q Consensus 215 ~~~~~~~~~~~l~~~~g~~~~~~~~--------~~~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (390)
++....+....+++ .|+.+.+... ...+.. ...++|..+...++|+.||++.... ++....
T Consensus 320 fy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~---------GF~~~~ 389 (538)
T KOG0252|consen 320 FYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM---------GFFIMT 389 (538)
T ss_pred hhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh---------hHHHHH
Confidence 89988888888887 4766555433 112222 2333466667789999999954332 333333
Q ss_pred HHHHHHh--cC---CchHHHHHHHHHHhhhccccccccchhccccCC-CcchhHHHHHHHHHHHHHHHHHHHHHHHHh--
Q 016374 286 FFLTQLS--HV---DSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQ-- 357 (390)
Q Consensus 286 ~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~-- 357 (390)
++..... .+ +.....+...+..++.....+.....+..|..| +.|++..|+....+..|++++.....++.+
T Consensus 390 i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~ 469 (538)
T KOG0252|consen 390 IFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHN 469 (538)
T ss_pred HHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhcc
Confidence 2222222 11 122233344444455555556666777777777 799999999999999999999999999999
Q ss_pred ---cCCchhHHHHHHHHHHHHHHHHHHhh
Q 016374 358 ---HGSWDDVFKVSVGLYLVGTAVWNLFS 383 (390)
Q Consensus 358 ---~~g~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
..+.+..+++.+.+++++.+..+++.
T Consensus 470 yp~~~g~~~v~~i~~~~~~~gi~~T~l~p 498 (538)
T KOG0252|consen 470 YPPNIGVRNVFIILAGCMLLGILFTLLIP 498 (538)
T ss_pred CCccccchHHHHHHHHHHHHhHheeEEee
Confidence 68899999999999999988877664
No 100
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.93 E-value=2e-23 Score=190.07 Aligned_cols=373 Identities=14% Similarity=0.072 Sum_probs=253.3
Q ss_pred ccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhh----hhhhHHHHHH-HHHHHHHHHHHhhhhhhhhHH------
Q 016374 5 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD----TVGGKAVLGF-GVVWWSIATALTPVAAKLGLP------ 73 (390)
Q Consensus 5 lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~l~~-~~~~~~~~~~~~~~~~~~~~~------ 73 (390)
++++.+++|.++.+.+++..+..+...+.+|+.|+++| |+||||.++. +.....++..+.++++ +..
T Consensus 27 l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~--~~~~~~~~~ 104 (477)
T TIGR01301 27 LTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAA--DIGHLFGDN 104 (477)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCc--hhhhhcccc
Confidence 45577889999999999999999999999999999999 5999999776 4666777777777776 432
Q ss_pred -----------HHHHHHHHHhhccccchhhhhHHhhhcccCCch--hHHHHHHHHhhhhhhHhHHhhHHHH--hhhc---
Q 016374 74 -----------FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAER--SRSLALVYSGMYLGSVTGLAFSPFL--IHRF--- 135 (390)
Q Consensus 74 -----------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l--~~~~--- 135 (390)
.++++-.+..++.....++..++++|.+|+++| +++.++.+...++|.++|+.++++. .+.+
T Consensus 105 ~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~ 184 (477)
T TIGR01301 105 LDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFT 184 (477)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccc
Confidence 222333344457777788889999999998765 6899999999999999999999875 2222
Q ss_pred ----------CChHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhc-----Cch
Q 016374 136 ----------GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILS-----KPP 200 (390)
Q Consensus 136 ----------gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 200 (390)
+.|..|++.++..++...+..+..+|.|..+++..++++. ++ .++......++++++ .|.
T Consensus 185 ~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~i~~~~~~mP~~ 259 (477)
T TIGR01301 185 KTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEA--AP---PSKHGEEAFFGELFGAFKYLPRP 259 (477)
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhc--cc---ccccchhhhHHHHHHHHHHCCHH
Confidence 5688999988888888778888888876433221111100 00 011111122233332 356
Q ss_pred hHHHHHHHHHHHHHHHHHhhchHHHHhH-hcCCcccc----------hhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCc-
Q 016374 201 VWALIVSHFCHNWGTFILLTWMPTYYNQ-VLHFNLTE----------SGLFCVLPWLTMAFSANLGGWIADTLVSKGLS- 268 (390)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~----------~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~- 268 (390)
++.+++..++.+++.+.+..|.+.|+.+ .++-++.+ ..+....+.+...+.+++..++.+|+|+||..
T Consensus 260 m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~ 339 (477)
T TIGR01301 260 VWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLW 339 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHH
Confidence 8899999999999999999999998875 45443221 12233445555567777888889999854321
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcC---C--------------chHHHHHHHHHHhhhccccccccchhccccCC--Cc
Q 016374 269 VTTVRKIMQSIGFLGPAFFLTQLSHV---D--------------SPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP--RY 329 (390)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 329 (390)
..+ ..+...++....+ .....+ . .+.....+..+|.........+.....++.++ +.
T Consensus 340 ~~s--~~~~~~~l~~~~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~ 415 (477)
T TIGR01301 340 GIV--NIILAICLAATVL--VTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAG 415 (477)
T ss_pred HHH--HHHHHHHHHHHHH--HHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCC
Confidence 111 0111111111111 111000 0 14445556666777776666666666676664 56
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcC--CchhHHHHHHHHHHHHHHHHHHhhcCCCc
Q 016374 330 SGVLLGLSNTAGVLAGVFGTAATGYILQHG--SWDDVFKVSVGLYLVGTAVWNLFSTGEKV 388 (390)
Q Consensus 330 ~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (390)
.|..+|+.|.+-.+.+.+.....|.+.+.. +-...+.+.++..+++.+..++..++.+.
T Consensus 416 ~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 416 QGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 799999999999999999999998866653 35688888888888888887776655443
No 101
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.93 E-value=1.2e-22 Score=186.08 Aligned_cols=358 Identities=16% Similarity=0.112 Sum_probs=267.5
Q ss_pred chHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHH-HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhhhH
Q 016374 17 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVL-GFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNN 95 (390)
Q Consensus 17 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l-~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 95 (390)
+..++..++..+..++..|+.|.++|+-|+||.+ .....+..+++....+.+..+++...+.-++.-++.+.......+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457788899999999999999999999977665 444555556666666654335555556666666777788888999
Q ss_pred HhhhcccCCch--------------------------hHHHHHHHHhhhhhhHhHHhhHHHHhhh--------cCChHHH
Q 016374 96 ILSKWVPVAER--------------------------SRSLALVYSGMYLGSVTGLAFSPFLIHR--------FGWPSVF 141 (390)
Q Consensus 96 ~i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------~gw~~~f 141 (390)
++.|..+++++ ++..+.-.....+|.++.-.+.-.+... .+-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999998888 8999998888889988887776655422 2348888
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCC-CchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhh
Q 016374 142 YSFGSLGTVWFTVWLSKAHSSPAEDPQ-LRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLT 220 (390)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (390)
.+.++.-++..+..+++.||.|++++. ..++......++ ....++++.|.|.....++..++..-+...+..
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~-------l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~ 302 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKR-------LWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIIS 302 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHH-------HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 888887777777778888887763222 111110000000 023456677888999999999999999999999
Q ss_pred chHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhc--CCchhHHHHHHHHHHHHHHHHHHH-----HHhc
Q 016374 221 WMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK--GLSVTTVRKIMQSIGFLGPAFFLT-----QLSH 293 (390)
Q Consensus 221 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 293 (390)
....|.++.+|++..+...+.....+.+++|+++.+++.||+|.| +...... ....+.....+. ....
T Consensus 303 ~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l-----~~~~~i~~~g~~G~~~~~~g~ 377 (477)
T PF11700_consen 303 FAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISL-----ILWIIIPLYGLFGFWPSFFGL 377 (477)
T ss_pred HHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH-----HHHHHHHHHHHHHhhhcccCc
Confidence 999999999999999999999999999999999999999999998 3322111 011011111111 1123
Q ss_pred CCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHH
Q 016374 294 VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDVFKVSVGLY 372 (390)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g-~~~~~~~~~~~~ 372 (390)
.+.+...+...+.|.+.+......-..+.+..|+++.+..+|++.......+.+||.+.|.+.|..| .+..+....++.
T Consensus 378 ~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf 457 (477)
T PF11700_consen 378 KSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLF 457 (477)
T ss_pred ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 4455566667777888887777777778888888999999999999999999999999999999854 889999999999
Q ss_pred HHHHHHHHHhhcCC
Q 016374 373 LVGTAVWNLFSTGE 386 (390)
Q Consensus 373 ~~~~~~~~~~~~~~ 386 (390)
+++.++......++
T Consensus 458 ~~gl~ll~~v~~~~ 471 (477)
T PF11700_consen 458 LIGLILLFFVDVEK 471 (477)
T ss_pred HHHHHHHhhccchh
Confidence 99998887765443
No 102
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.93 E-value=2.2e-23 Score=182.56 Aligned_cols=278 Identities=11% Similarity=0.040 Sum_probs=197.3
Q ss_pred hHHHHHHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhh----------------
Q 016374 71 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR---------------- 134 (390)
Q Consensus 71 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~---------------- 134 (390)
+++.++++-++.|.|.+...+..++++++..++|++.+.+++.+.++++|..++|.+++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEA 88 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHH
Confidence 8999999999999999999999999999999999999999999999999999999999988731
Q ss_pred cCChHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHH
Q 016374 135 FGWPSVFYSFGSLGTVWFTVWLSK-AHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNW 213 (390)
Q Consensus 135 ~gw~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (390)
.+||++|++.+.+.++..+++.+. .||.++++ ++++. +++. .+.++.+|+|+++...+..++...
T Consensus 89 ~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~---~~~~~--------~~~~---~~~~~~~~~~~~~l~~~~~f~yvg 154 (310)
T TIGR01272 89 AKVHTPYLLLAGALAVLAIIFAFLPLPELQEAD---VARVS--------SGDT---TQKTSAFQFTHLVLGALGIFVYVG 154 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCccc---ccccc--------cccc---cchhhHHhhHHHHHHHHHHHHHHH
Confidence 479999997776655554433332 22221111 00000 0000 112246788888888888888888
Q ss_pred HHHHHhhchHHHHhHh--cCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHH
Q 016374 214 GTFILLTWMPTYYNQV--LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL 291 (390)
Q Consensus 214 ~~~~~~~~~~~~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (390)
...+...|.+.|+++. +|.++.+.+...+....+.++|+++.+++.||+++|+.... +...........
T Consensus 155 ~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~---------~~~l~~~~~~l~ 225 (310)
T TIGR01272 155 AEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAF---------NAFLAVLLSIGA 225 (310)
T ss_pred HHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH---------HHHHHHHHHHHH
Confidence 8999999999999864 68999999999999999999999999999999998853221 111111111111
Q ss_pred hcCCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHH
Q 016374 292 SHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGL 371 (390)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~ 371 (390)
...+.........+.+.+.+...+.......++ .|++.+++.++. ....+|+.+.|.+.|.+.|..|.+.++++...+
T Consensus 226 ~~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~-~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 226 ALTHGYVAMWFVLALGLFNSIMFPTIFSLALNA-LGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 112223333344455655555544444444444 444556677774 667899999999999999998888888755444
Q ss_pred HH
Q 016374 372 YL 373 (390)
Q Consensus 372 ~~ 373 (390)
.+
T Consensus 304 ~~ 305 (310)
T TIGR01272 304 YL 305 (310)
T ss_pred HH
Confidence 33
No 103
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.92 E-value=2.7e-23 Score=183.49 Aligned_cols=360 Identities=11% Similarity=0.061 Sum_probs=228.7
Q ss_pred ccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHH---HHHHHHhhhhhhh--hHH-HHHHHHHHH
Q 016374 9 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW---SIATALTPVAAKL--GLP-FLLVVRVFM 82 (390)
Q Consensus 9 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~---~~~~~~~~~~~~~--~~~-~l~~~r~l~ 82 (390)
.++.|+|.+++|.+.++..+...+.+|+.|.++||.|.||-++...... ........+.+-. |.+ ..+++-...
T Consensus 35 ~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l 114 (412)
T PF01306_consen 35 TQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYL 114 (412)
T ss_dssp HHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTT
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3458999999999999999999999999999999999766554433222 2222232333310 221 122222233
Q ss_pred hhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCC
Q 016374 83 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 162 (390)
Q Consensus 83 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (390)
|+......|..-+++.++. ++.+.-.|-.....++|.+++..++|.+.+. +-+..|++....+++..++.+...|+.
T Consensus 115 ~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~~~~il~lll~~~~~~~ 191 (412)
T PF01306_consen 115 GLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIFWIASAAAIILLLLLLLLKPDV 191 (412)
T ss_dssp TTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHSS---S
T ss_pred HHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee-CccHHHHHHHHHHHHHHHHHHHcCCcC
Confidence 3333344455555544443 4556677888899999999999999999873 456778877766666655555555444
Q ss_pred CCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhc---CCcccchhh
Q 016374 163 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL---HFNLTESGL 239 (390)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---g~~~~~~~~ 239 (390)
+++.+..+.++. ++++.+..+..+++|+|++|.+.+........+..+....|.|.++.+ +.+....|+
T Consensus 192 ~~~~~~~~~~~~--------~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~ 263 (412)
T PF01306_consen 192 PPQAEVADALGA--------KKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGY 263 (412)
T ss_dssp SSSS-SSTTSSS--------------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHH
T ss_pred chhhhhhccccc--------CCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhH
Confidence 333221111110 011112334567899999999988888888888888888888887643 334456788
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH-HHhhhcccccccc
Q 016374 240 FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMA-CSQGTDAFSQSGL 318 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 318 (390)
+.+..-+.+++.-.+.+++.+|+|.|+. +.+.......=.......++++.....-. -+.-.........
T Consensus 264 l~s~~v~~E~~~m~~~p~li~rig~k~~---------Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~f 334 (412)
T PF01306_consen 264 LWSVQVFLEALMMFFSPWLINRIGAKNL---------LLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAF 334 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HHHH---------HHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChHhH---------HHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888899999999999999999999942 22222223332333334455554444433 3444444444444
Q ss_pred chhccccCCCcchhHHHHH-HHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhcCCCc
Q 016374 319 YSNHQDIAPRYSGVLLGLS-NTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKV 388 (390)
Q Consensus 319 ~~~~~~~~~~~~~~~~g~~-~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (390)
-.+.+..++|..++...+. +...+++..+.+.+.|.++|+.|++..|++.+.+.+...++..+..+++|+
T Consensus 335 kYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 335 KYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 5555666667888888885 688899999999999999999999999999888888777776666554443
No 104
>PRK09669 putative symporter YagG; Provisional
Probab=99.92 E-value=6.5e-23 Score=189.87 Aligned_cols=332 Identities=14% Similarity=0.056 Sum_probs=218.9
Q ss_pred cccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhh----hhhHHH-HHHHHHHHHHHHHHhhhhhh----hhHHHHH
Q 016374 6 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKAV-LGFGVVWWSIATALTPVAAK----LGLPFLL 76 (390)
Q Consensus 6 p~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~-l~~~~~~~~~~~~~~~~~~~----~~~~~l~ 76 (390)
+.+.+++|+|+.++|.+.++..+..++..|+.|+++|| +||||. ++.+....+++..+....+. .....++
T Consensus 34 ~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~ 113 (444)
T PRK09669 34 YFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYAC 113 (444)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHH
Confidence 44678899999999999999999999999999999998 787544 66777777777765554441 1245566
Q ss_pred HHHHHHhhccccchhhhhHHhhhcc-cCCchhHHHHHHHHhhhhhhHhHHhhHHHHhh-------hcCChHHHHHHHHHH
Q 016374 77 VVRVFMGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-------RFGWPSVFYSFGSLG 148 (390)
Q Consensus 77 ~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------~~gw~~~f~~~~~~~ 148 (390)
+...+.+.+.+....+..++.+|+. ++++|.+..+.......+|..+++.+...+.. ..+|+..+.+.+++.
T Consensus 114 ~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~ 193 (444)
T PRK09669 114 VTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLG 193 (444)
T ss_pred HHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 6667777777777777889999988 56889999898888888888887765544433 246888888888887
Q ss_pred HHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhH
Q 016374 149 TVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ 228 (390)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 228 (390)
.+.....++..+|+++++++. +.....++++++|||.++......++............+.|.++
T Consensus 194 ~v~~~~~~~~~~e~~~~~~~~---------------~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~ 258 (444)
T PRK09669 194 VVLFFCCFFMTKERYTPEVDN---------------SSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNY 258 (444)
T ss_pred HHHHHHHhCCeEEecCCCCcC---------------CCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeee
Confidence 776665555555543221100 01113456778899999888777776666665545544444444
Q ss_pred hcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH-HHHHHHHHhcCCchH-HHHHHHHH
Q 016374 229 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG-PAFFLTQLSHVDSPA-MAVLCMAC 306 (390)
Q Consensus 229 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~ 306 (390)
..+. +...+.+.....+..+++.++.+++.||+++|+.... ...... ....+.... .++.+ ..+...+.
T Consensus 259 ~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~ 329 (444)
T PRK09669 259 VLLR-PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKW-------TIVAFVILSALIFFIP-PSNVWLIFALNILF 329 (444)
T ss_pred ecCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHH-------HHHHHHHHHHHHHHhC-cchHHHHHHHHHHH
Confidence 3332 3333445555567788888999999999998843221 111111 111122222 23333 33334444
Q ss_pred HhhhccccccccchhccccC--------CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCch
Q 016374 307 SQGTDAFSQSGLYSNHQDIA--------PRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWD 362 (390)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~ 362 (390)
+.+.+... +.......|.. .+..|..+|..+....+|..+|+.+.|.+.+..||+
T Consensus 330 g~~~~~~~-~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 330 NFIQNLTT-PLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred HHHHHHHH-HHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 55555443 33333333332 234577889999999999999999999999987763
No 105
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.92 E-value=7.9e-25 Score=177.73 Aligned_cols=355 Identities=16% Similarity=0.153 Sum_probs=243.1
Q ss_pred cccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhh-hhhHHHHHHHHHHHHHHHHHhh---hhhhhhHHHHHHHHHH
Q 016374 6 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIATALTP---VAAKLGLPFLLVVRVF 81 (390)
Q Consensus 6 p~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~~~l~~~r~l 81 (390)
.+..+|.+++.++..++.+.|+....+.+.++|++.|| +|-|..-++-.....++.++++ ..+ .+|++..+|++
T Consensus 68 ~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~--aFw~M~~GRF~ 145 (459)
T KOG4686|consen 68 IDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISH--AFWTMLAGRFL 145 (459)
T ss_pred hhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHH--HHHHHHhhhee
Confidence 34567778888899999999999999999999999997 8887766555556666666553 456 79999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCC------hHHHHHH---H----HHH
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW------PSVFYSF---G----SLG 148 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw------~~~f~~~---~----~~~ 148 (390)
.|+|.-....+-+++...|+..|+.+.++|+..+...+|..+--.+.+++.++.+- +...-+. . ...
T Consensus 146 FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~s 225 (459)
T KOG4686|consen 146 FGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQS 225 (459)
T ss_pred eccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Confidence 99998888888999999999999999999999999999999888888888775431 1111110 0 111
Q ss_pred HHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhH
Q 016374 149 TVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ 228 (390)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 228 (390)
++.+ +..-+.++. .|+....++....+..+..+.+ --.|.+|.+....++.+.....+...-|.++++
T Consensus 226 lica-l~lg~~D~r---------Aerilh~e~g~~Ge~pkLtdv~--~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~ 293 (459)
T KOG4686|consen 226 LICA-LSLGLSDDR---------AERILHLEEGFLGEEPKLTDVN--TFYPPFWVLVIICVLYYVAWFPFITLGPMFFQK 293 (459)
T ss_pred HHHH-HHhhhhhhH---------HHHHHhhhcCcccCCccccccc--ccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 1111 111111110 0111001111111111111111 125789999999999999999999999999999
Q ss_pred hcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH-HHHHHHHhcCCchHHHHHHHHHH
Q 016374 229 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGP-AFFLTQLSHVDSPAMAVLCMACS 307 (390)
Q Consensus 229 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 307 (390)
.+|+|+..++.+.+.......+.+++.|.++||+|++-+ ++.+.+.... +-....+.. +.......+.|
T Consensus 294 rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~-------wv~~a~~~tl~~H~~l~Ft~---lsPy~~m~~lG 363 (459)
T KOG4686|consen 294 RFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLW-------WVASACILTLLGHSGLFFTF---LSPYTSMTFLG 363 (459)
T ss_pred hhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceeh-------hHHHHHHHHHHHhhhHHhhh---ccHHHHHHHHh
Confidence 999999999999999999999999999999999999833 2222221111 111111111 12234444555
Q ss_pred hhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-ch---hHHHHHHHHHHHHHHHHHHhh
Q 016374 308 QGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WD---DVFKVSVGLYLVGTAVWNLFS 383 (390)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g-~~---~~~~~~~~~~~~~~~~~~~~~ 383 (390)
........+....+...+|+++.|++.|.++.++++|-++.|.+.|.+.|+.| |. .-|+......+.+..+.+.+.
T Consensus 364 LsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N 443 (459)
T KOG4686|consen 364 LSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLN 443 (459)
T ss_pred hhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhee
Confidence 55555444455555666777899999999999999999999999999999844 54 334444445555555544444
Q ss_pred c
Q 016374 384 T 384 (390)
Q Consensus 384 ~ 384 (390)
+
T Consensus 444 ~ 444 (459)
T KOG4686|consen 444 K 444 (459)
T ss_pred c
Confidence 3
No 106
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.92 E-value=4.2e-23 Score=191.12 Aligned_cols=359 Identities=10% Similarity=-0.021 Sum_probs=234.0
Q ss_pred cccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhh-----hHHHHHHHHHHHH-HHHHHhhhhhhhhHH-HHH
Q 016374 4 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG-----GKAVLGFGVVWWS-IATALTPVAAKLGLP-FLL 76 (390)
Q Consensus 4 ~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~l~~~~~~~~-~~~~~~~~~~~~~~~-~l~ 76 (390)
..|.+.+++|+|+++++...+...+...+-.+ +|.++||++ ||+.++++.++.. ++....+..+ +.. ...
T Consensus 48 ~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~--~~~~~~~ 124 (468)
T TIGR00788 48 LSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKV--SSAKVAA 124 (468)
T ss_pred hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhccccc--chHHHHH
Confidence 34556778999999999999999999999555 999999998 7787888877763 4444444444 433 344
Q ss_pred HHHHHHhhccccchhhhhHHhhhcccCCchhH---HHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHH
Q 016374 77 VVRVFMGIGEGVAMPAMNNILSKWVPVAERSR---SLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 153 (390)
Q Consensus 77 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~---~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~ 153 (390)
+..++.+++.+...++..++..|..+ |+++. ..+......++|..+++.+++.+.+.++||..|++.+++.++..
T Consensus 125 ~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~- 202 (468)
T TIGR00788 125 AFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQL- 202 (468)
T ss_pred HHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHH-
Confidence 47899999999999999999999997 55443 33344444568999999999999999999999999888877774
Q ss_pred HHHhhccCCCC-CCCCCchhhh---hhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHH-HHHHHHHHhhchHHHHhH
Q 016374 154 VWLSKAHSSPA-EDPQLRPAEK---KLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFC-HNWGTFILLTWMPTYYNQ 228 (390)
Q Consensus 154 ~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~ 228 (390)
+...+.+|++. ..++.++++. ........+...+...+.++.+++|.++...+..++ ............ .+.++
T Consensus 203 ~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f-~~~~~ 281 (468)
T TIGR00788 203 FVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVF-CATTQ 281 (468)
T ss_pred HHHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeE-EEEcc
Confidence 33445566531 1111101000 000000000000001234456788888775555555 222211111111 13334
Q ss_pred hcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHh---------c--CCch
Q 016374 229 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS---------H--VDSP 297 (390)
Q Consensus 229 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--~~~~ 297 (390)
..|+++.+.|......+++.+++....++..+|++.|+. ...+.+.......... . .+..
T Consensus 282 ~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~---------l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~ 352 (468)
T TIGR00788 282 CLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLL---------FGVTTLLYTLSSLFDLILVKRWNLAFGISDEV 352 (468)
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHH---------HHHHHHHHHHHHhCceeeeeccccccCCCCee
Confidence 589999999999999999999999999999888887732 2222222222111100 0 1111
Q ss_pred HHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----chhHHHHHHHHH
Q 016374 298 AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-----WDDVFKVSVGLY 372 (390)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g-----~~~~~~~~~~~~ 372 (390)
.......+...+.+....+......+.+|++++|+.+++.++..++|..+++.++|.+.++.| ++..+....++.
T Consensus 353 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~ 432 (468)
T TIGR00788 353 FVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHS 432 (468)
T ss_pred eeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHH
Confidence 222333444555555555666666677788999999999999999999999999999999877 776666555555
Q ss_pred HHHHH
Q 016374 373 LVGTA 377 (390)
Q Consensus 373 ~~~~~ 377 (390)
+..++
T Consensus 433 ~~~l~ 437 (468)
T TIGR00788 433 LAPLL 437 (468)
T ss_pred HHHHH
Confidence 55443
No 107
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.91 E-value=9.8e-23 Score=187.79 Aligned_cols=337 Identities=17% Similarity=0.199 Sum_probs=248.8
Q ss_pred ccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhh----hhhhHHH-HHHHHHHHHHHHHHhhhh-h-hh----hHH
Q 016374 5 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD----TVGGKAV-LGFGVVWWSIATALTPVA-A-KL----GLP 73 (390)
Q Consensus 5 lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~-l~~~~~~~~~~~~~~~~~-~-~~----~~~ 73 (390)
.+...+.+|+++..+|.+..+..+..++..|+.|.++| |+||||. ++.+....+++..++... + +. ...
T Consensus 25 ~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~ 104 (428)
T PF13347_consen 25 LYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLV 104 (428)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHH
Confidence 34567788999999999999999999999999999999 8998777 667888888888877765 3 11 223
Q ss_pred HHHHHHHHHhhccccchhhhhHHhhhccc-CCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhc-------CChHHHHHHH
Q 016374 74 FLLVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------GWPSVFYSFG 145 (390)
Q Consensus 74 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------gw~~~f~~~~ 145 (390)
.+.+.-++..++......+..++..|..+ +++|.+..+.-..+..+|..+...+.+.+.+.. +|++...+.+
T Consensus 105 ~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~ 184 (428)
T PF13347_consen 105 WLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLA 184 (428)
T ss_pred HHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHH
Confidence 45667777799999899999999999997 578999999999999999876666666655422 5899999988
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHH
Q 016374 146 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 225 (390)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (390)
++.++...+..+..+|++++.++.+ ++...+..+++++|||.++...+..++............+.|
T Consensus 185 iv~~v~~~i~~~~~ke~~~~~~~~~-------------~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~ 251 (428)
T PF13347_consen 185 IVGLVFFLITFFFVKERSVEVTEQE-------------KKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYY 251 (428)
T ss_pred HHHHHHhhhhhheeeeccccccccc-------------cccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 8888887777777777222111111 111124456788999999999999999988888888889999
Q ss_pred HhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH-HHHHHHhcCCchHHHHHHH
Q 016374 226 YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA-FFLTQLSHVDSPAMAVLCM 304 (390)
Q Consensus 226 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 304 (390)
.++..|.+ ...+.......++.+++.++.++++||+|+|+....+. ...... ..+......+.+...+...
T Consensus 252 ~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~ 323 (428)
T PF13347_consen 252 FTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGL-------LLAALGFLLLFFLGPGSPWLVLILFI 323 (428)
T ss_pred HHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhH-------HHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 99987776 55667777888999999999999999999997544321 111111 1122222234455555566
Q ss_pred HHHhhhccccccccchhccccC-------CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCch
Q 016374 305 ACSQGTDAFSQSGLYSNHQDIA-------PRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWD 362 (390)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~ 362 (390)
+.+.+.+...........+..+ .++.|..+|..+....++..+++.+.+.+.+..||+
T Consensus 324 l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 324 LAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred HhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 6666666555444333333222 245699999999999999999999999998875544
No 108
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.90 E-value=1.6e-20 Score=171.87 Aligned_cols=366 Identities=14% Similarity=0.159 Sum_probs=217.3
Q ss_pred cccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhh-hhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhcc
Q 016374 8 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGE 86 (390)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 86 (390)
+++++|.++.+.+.+.+.+.....++.+++|+++||+ ||||+++.+.++.+++.++.+..+. +...+.++..+.++|.
T Consensus 36 L~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~-~~~~~~l~l~li~iG~ 114 (493)
T PRK15462 36 LTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEI-HPSFLYLSLAIIVCGY 114 (493)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhc-chhHHHHHHHHHHHhc
Confidence 4567899999999999999999999999999999999 9999999999999999877765431 2233444444455666
Q ss_pred ccchhhhhHHhhhcccCC--chhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhc---cC
Q 016374 87 GVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA---HS 161 (390)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~---~~ 161 (390)
|...+...++++|.+|++ +|..++++.+...++|..++|.+.+++.+.+|||+.|.+.++..++..+..+... ++
T Consensus 115 G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~ 194 (493)
T PRK15462 115 GLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTH 194 (493)
T ss_pred ccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 666777789999999875 6999999999999999999999999999999999999987654444333322211 11
Q ss_pred CCCCCCCCchhhhhh----------------hh-hcccCCCCC-----------------CcchhhhhhcCc--hhHHHH
Q 016374 162 SPAEDPQLRPAEKKL----------------IV-SSCASKEPV-----------------KTIPWGLILSKP--PVWALI 205 (390)
Q Consensus 162 ~~~~~~~~~~~~~~~----------------~~-~~~~~~~~~-----------------~~~~~~~~~~~~--~~~~~~ 205 (390)
....+++..++++.. .. ....++... ...+..+.-|+| .+..+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~er~r~~~~~~l~ 274 (493)
T PRK15462 195 TRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLT 274 (493)
T ss_pred CCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhhHHHHHHHH
Confidence 100001111101000 00 000000000 000000001122 122333
Q ss_pred HHHHHHHHHHHHHhhchHHHHhHhc-----CCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 016374 206 VSHFCHNWGTFILLTWMPTYYNQVL-----HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG 280 (390)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~l~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 280 (390)
+...+.+..+....+-+..|.++.. |++ ...++..+...+.-++.+++.+++-.|..+|+.......+...++.
T Consensus 275 ~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~ 353 (493)
T PRK15462 275 FFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLG 353 (493)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHH
Confidence 3334444444444555566666532 222 2356778888888888888888887777443211111122333333
Q ss_pred HHHHHHHHHHH-----hc---CCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHH-HHHHHHHHHH
Q 016374 281 FLGPAFFLTQL-----SH---VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAG-VLAGVFGTAA 351 (390)
Q Consensus 281 ~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~g~~ig~~i 351 (390)
+.+.+...... .. .+..|+.....+...+.....+.......+..|++.+|..+|...... .+|..++..+
T Consensus 354 ~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~ 433 (493)
T PRK15462 354 LMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVI 433 (493)
T ss_pred HHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333222211 11 133444455555566666666555555666666689999999986533 5666666666
Q ss_pred HHHHHhc------------CCchhHHHHHHHHHHHH
Q 016374 352 TGYILQH------------GSWDDVFKVSVGLYLVG 375 (390)
Q Consensus 352 ~g~l~~~------------~g~~~~~~~~~~~~~~~ 375 (390)
.+...+. ..|...|...+...++.
T Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 434 ADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 5544311 13556676666555544
No 109
>PRK09848 glucuronide transporter; Provisional
Probab=99.89 E-value=5.4e-21 Score=177.40 Aligned_cols=333 Identities=14% Similarity=0.061 Sum_probs=205.9
Q ss_pred cccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhh----hhHHHH-HHHHHHHHHHHHHh-hh----hhhhhHHHH
Q 016374 6 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV----GGKAVL-GFGVVWWSIATALT-PV----AAKLGLPFL 75 (390)
Q Consensus 6 p~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~----Grr~~l-~~~~~~~~~~~~~~-~~----~~~~~~~~l 75 (390)
+.+++++|+++.++|.+.+...+..++..++.|+++||. ||||.. ..+.+...+...+. .. .+.......
T Consensus 33 ~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (448)
T PRK09848 33 SYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYA 112 (448)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHH
Confidence 456777899999999999999999999999999999996 777754 55555444444332 11 110122334
Q ss_pred HHHHHHHhhccccchhhhhHHhhhccc-CCchhHHHHHHHHhhh-----hhhHhHHhhHHHHhhhc--CChHHHHHHHHH
Q 016374 76 LVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMY-----LGSVTGLAFSPFLIHRF--GWPSVFYSFGSL 147 (390)
Q Consensus 76 ~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~-----~g~~~g~~~~~~l~~~~--gw~~~f~~~~~~ 147 (390)
+..-.+.+++.+...++..++..+..+ +++|.+..+.-..+.+ ++..++|.+++...+.. +|.....+.+++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~ 192 (448)
T PRK09848 113 YLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIA 192 (448)
T ss_pred HHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 455667788888888887888777764 4678887766654433 44555555554321111 121111233333
Q ss_pred HHHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHh
Q 016374 148 GTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYN 227 (390)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 227 (390)
+.+.........||+++++++ ++..+..+++++|||.++...+..++............|.|++
T Consensus 193 ~~~~~~~~~~~~~e~~~~~~~----------------~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (448)
T PRK09848 193 GMVLYFICFKSTRENVVRIVA----------------QPSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVR 256 (448)
T ss_pred HHHHHHHHHcCcEeccCCCcc----------------CCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEe
Confidence 333333333334443221111 0111334677899999999888888888888888888888999
Q ss_pred HhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHH-HHHHHHH
Q 016374 228 QVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM-AVLCMAC 306 (390)
Q Consensus 228 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 306 (390)
+.+|.++...+.......++.+++.++.+++.||+++|+....+ ......+.........++.+. .....+.
T Consensus 257 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g-------~~~~~i~~~~~~~~~~~~~~~~~~~~~l~ 329 (448)
T PRK09848 257 YVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIG-------ALLGTCGYLLFFWVSVWSLPVALVALAIA 329 (448)
T ss_pred eecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH-------HHHHHHHHHHHHHcCchhHHHHHHHHHHH
Confidence 88887766655555555677888999999999999988543222 111111111111222222332 2333344
Q ss_pred HhhhccccccccchhccccCC-------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 016374 307 SQGTDAFSQSGLYSNHQDIAP-------RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 361 (390)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~ 361 (390)
+.+.+...........+..++ ++.|...|+.+..+.+|..+++.+.|.+.+..||
T Consensus 330 g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 330 SIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 555444433332232232222 3469999999999999999999999999887665
No 110
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.88 E-value=4.1e-21 Score=178.97 Aligned_cols=337 Identities=13% Similarity=0.044 Sum_probs=219.2
Q ss_pred cccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhh----hhhh-HHHHHHHHHHHHHHHHHhhhhhhh----hHHHHH
Q 016374 6 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD----TVGG-KAVLGFGVVWWSIATALTPVAAKL----GLPFLL 76 (390)
Q Consensus 6 p~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Gr-r~~l~~~~~~~~~~~~~~~~~~~~----~~~~l~ 76 (390)
..+.+.+|+++.++|.+..+..+.-++..|+.|+++| |+|| |+.++.+....+++..++...++. .+..++
T Consensus 31 ~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~ 110 (473)
T PRK10429 31 YYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVC 110 (473)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHH
Confidence 3456778999999999999999999999999999999 6698 555777888877776665443210 133455
Q ss_pred HHHHHHhhccccchhhhhHHhhhcc-cCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhh-------cCChHHHHHHHHHH
Q 016374 77 VVRVFMGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-------FGWPSVFYSFGSLG 148 (390)
Q Consensus 77 ~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-------~gw~~~f~~~~~~~ 148 (390)
+...+.+++.+...++..++..|.. ++++|.+..+.-..+.++|..+.+.+...+.+. .+|+....+.+++.
T Consensus 111 ~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~ 190 (473)
T PRK10429 111 VTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFF 190 (473)
T ss_pred HHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 5667778888888888999999998 589999999987777787766665554443222 24666666666666
Q ss_pred HHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhH
Q 016374 149 TVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ 228 (390)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 228 (390)
++.....++..+|++++++...++ +++...+..++.++|||.++......++..........+.+.|.+.
T Consensus 191 ~~~~~~~~~~~~e~~~~~~~~~~~----------~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y 260 (473)
T PRK10429 191 IVSTIITLRNVHEVYSSDNQVSAE----------GSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTY 260 (473)
T ss_pred HHHHHHHHcCceecCCcccccccc----------ccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEE
Confidence 665555555556643221110000 0111113345567789998888888888877777777777766666
Q ss_pred hcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH-HHHHHHH--HhcCCchHH-HHHHH
Q 016374 229 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG-PAFFLTQ--LSHVDSPAM-AVLCM 304 (390)
Q Consensus 229 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~-~~~~~ 304 (390)
..+ ++...+.+.....++.+++.++.+++.||+|+|+....+ ..... ....... ....++.+. .+...
T Consensus 261 ~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 332 (473)
T PRK10429 261 VIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGA-------SIFPVLSCGVLLLMGLAAPHNALLIVIAGI 332 (473)
T ss_pred ECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHH-------HHHHHHHHHHHHHHhccCchhHHHHHHHHH
Confidence 434 455566666667788899999999999999998543221 11111 1111111 112222332 23333
Q ss_pred HHHhhhccccccccchhcccc-C-------CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 016374 305 ACSQGTDAFSQSGLYSNHQDI-A-------PRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 361 (390)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~ 361 (390)
+.+.+.+... .....+..|. + .+..|..+|.......++..+++.+.|.+.+..||
T Consensus 333 l~g~~~~~~~-~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 333 LLNIGTALFW-VLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHH-HHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3444444333 2222222222 1 23456799999999999999999999999987665
No 111
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.88 E-value=7.5e-20 Score=158.27 Aligned_cols=354 Identities=17% Similarity=0.068 Sum_probs=266.1
Q ss_pred cchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHH-HHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHhhccccchhhh
Q 016374 16 PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAV-LGFGVVWWSIATALTPVAAK-LGLPFLLVVRVFMGIGEGVAMPAM 93 (390)
Q Consensus 16 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~-l~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~ 93 (390)
.+..+...++..+..++.+|..|..+|+.|+||. +-....+..++.....++++ .+++..++.-.+..++.....+.-
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 3556888889999999999999999999996655 55666666677777778774 235556667888899998899999
Q ss_pred hHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHH--H-h---------------hhcCChHHHHHHHHHHHHHHHHH
Q 016374 94 NNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF--L-I---------------HRFGWPSVFYSFGSLGTVWFTVW 155 (390)
Q Consensus 94 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~--l-~---------------~~~gw~~~f~~~~~~~~~~~~~~ 155 (390)
.+++.+..++++-++..+.-.....+|..+.-...-. . . +...-|..+.+.++-.++..+..
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence 9999999999998888888777777777766554311 1 1 12246778888888777777777
Q ss_pred HhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCccc
Q 016374 156 LSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT 235 (390)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 235 (390)
++..|+.++...+..+.-..... +-..+++++.+++++....+..++..=+..........|..+.+|++..
T Consensus 217 ~~~v~~~~~~~~~~~~~l~~g~k--------~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~ 288 (438)
T COG2270 217 ILNVHDAEKISSPPPTALRNGFK--------ELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSST 288 (438)
T ss_pred HhcccccccccccchHHHHHHHH--------HHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHH
Confidence 77776655432111111111000 0134567788888999999999999999999999999999988999999
Q ss_pred chhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccc
Q 016374 236 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQ 315 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (390)
+...+.....+.+++++++.|++.||++.|+....+ +..... ..+............+..++.+.+.+....
T Consensus 289 ~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~-------lvi~~~-~~~~~~~~~~~~~f~i~gll~g~s~G~~qA 360 (438)
T COG2270 289 ELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIG-------LVILSI-AALYLIFLEGELDFWILGLLVGTSLGGAQA 360 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHH-------HHHHHH-HHHHHHHccccHHHHHHHHHHHHhcchHHH
Confidence 999999999999999999999999999999654432 111111 122222233455556666777888887777
Q ss_pred cccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCchhHHHHHHHHHHHHHHHHHHhhcC
Q 016374 316 SGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFSTG 385 (390)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
..-....+.+||++.++.+|+++..+...+..||.+.+.+.+. .+-+..+....++..++.+.++..+.+
T Consensus 361 ~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 361 SSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 7777788888999999999999999999999999999999887 557788888888888888776665444
No 112
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.88 E-value=2.8e-19 Score=155.25 Aligned_cols=362 Identities=15% Similarity=0.137 Sum_probs=259.0
Q ss_pred ccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhh-----hHHH-HHHHHHHHHHHHHHhhhhh------------
Q 016374 7 PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG-----GKAV-LGFGVVWWSIATALTPVAA------------ 68 (390)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~-l~~~~~~~~~~~~~~~~~~------------ 68 (390)
-+..|++++....+...+...+..- ..+.+|+.+|+.+ ||.. +..|.+....+..+.+++.
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~ 83 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSG 83 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 3567899999999999998888765 5999999999998 7766 4556666666555544321
Q ss_pred hhhHH--HHHHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHH---
Q 016374 69 KLGLP--FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS--- 143 (390)
Q Consensus 69 ~~~~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~--- 143 (390)
+...+ ...+.-.+.|+|.+....+..+++.|..|+|+|+++.++.....-+|.+++..+.+.+.+.++-.....+
T Consensus 84 ~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~ 163 (403)
T PF03209_consen 84 PFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQG 163 (403)
T ss_pred ccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHH
Confidence 11122 3344578889999988999999999999999999999999999999999999999999887663332222
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchH
Q 016374 144 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 223 (390)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (390)
.+++.++..++. .+..|++.++.... .+++++.....++++..+|+........++...+++.-...+-
T Consensus 164 ~a~i~~~l~~ia-~wg~E~r~~~~~~~----------~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLE 232 (403)
T PF03209_consen 164 VALIALLLNLIA-LWGQEPRRSRRAAA----------AERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILE 232 (403)
T ss_pred HHHHHHHHHHHH-HHhcccCCcccccC----------CCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcC
Confidence 222222222222 23333332222200 1112222345677888899998888888888888888888899
Q ss_pred HHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHH-HHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHH
Q 016374 224 TYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT-LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL 302 (390)
Q Consensus 224 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (390)
+|--|++|+++.+...+....+.+..++-...+++..| .++++... ..+..+..............+.+.....
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~-----~G~~~~~~~f~lii~a~~~~~~~~~~~~ 307 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAA-----LGCLLGALAFALIILAGPLGSPWLFRPG 307 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHH-----HHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence 99999999999999999999999999999999988774 33332211 2222222222222222333455566677
Q ss_pred HHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCchhHHHHHHHHH
Q 016374 303 CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH----------GSWDDVFKVSVGLY 372 (390)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~----------~g~~~~~~~~~~~~ 372 (390)
.+++|.+.+.+.......+.+...+++.|..+|.....+.++..++..++|.+.|. .+|...|.+=++..
T Consensus 308 ~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll 387 (403)
T PF03209_consen 308 VFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLL 387 (403)
T ss_pred HHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHH
Confidence 78888888888888888888877889999999999999999999999999999885 24667777777777
Q ss_pred HHHHHHHHHhhcC
Q 016374 373 LVGTAVWNLFSTG 385 (390)
Q Consensus 373 ~~~~~~~~~~~~~ 385 (390)
+++..+...+.++
T Consensus 388 ~~a~~ll~~l~~~ 400 (403)
T PF03209_consen 388 LAALVLLGRLDRR 400 (403)
T ss_pred HHHHHHHHHhhhh
Confidence 7777665555444
No 113
>PRK11462 putative transporter; Provisional
Probab=99.86 E-value=3.7e-19 Score=164.78 Aligned_cols=330 Identities=12% Similarity=0.035 Sum_probs=213.7
Q ss_pred ccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhh----hhhHHH-HHHHHHHHHHHHHHhhhhhhhh----HHHHHH
Q 016374 7 PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKAV-LGFGVVWWSIATALTPVAAKLG----LPFLLV 77 (390)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~-l~~~~~~~~~~~~~~~~~~~~~----~~~l~~ 77 (390)
...+..|+++..+|.+..+.-+--++..|+.|.++|| +||||. ++++....+++..++-..+..+ ...+.+
T Consensus 35 fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~ 114 (460)
T PRK11462 35 FYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAI 114 (460)
T ss_pred HHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHH
Confidence 3457789999999999999999999999999999996 798766 5667777887777665444111 344556
Q ss_pred HHHHHhhccccchhhhhHHhhhccc-CCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhc-------CChHHHHHHHHHHH
Q 016374 78 VRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------GWPSVFYSFGSLGT 149 (390)
Q Consensus 78 ~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------gw~~~f~~~~~~~~ 149 (390)
.-.+..++......+-.++.+|..+ +|||.+..++...+..+|..+++.+...+.+.. +|+....+.+++.+
T Consensus 115 ~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~ 194 (460)
T PRK11462 115 TYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAF 194 (460)
T ss_pred HHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHH
Confidence 6677788888888888999999986 789999999999999999888877766555433 57777777777766
Q ss_pred HHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHh
Q 016374 150 VWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV 229 (390)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 229 (390)
+...+.+...+|++++++++. ..+..++..+|||.++.+....++..............|.+..
T Consensus 195 i~~~i~~~~~kE~~~~~~~~~----------------~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~ 258 (460)
T PRK11462 195 MMLAFCFFTTKERVEAPPTTT----------------SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI 258 (460)
T ss_pred HHHHHHHhcceeccCCCccCC----------------CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh
Confidence 666555555555432211100 0123456678888887776666666555555545555555554
Q ss_pred cCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH-HHHHHHHhcCCchHHHHHHHHHHh
Q 016374 230 LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGP-AFFLTQLSHVDSPAMAVLCMACSQ 308 (390)
Q Consensus 230 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 308 (390)
.|.+ ...+.+.....++.+++.++++++.||+++|+... ........ ...+...+..+.........+.+.
T Consensus 259 ~g~~-~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 330 (460)
T PRK11462 259 LGTP-EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFW-------WTNALLAVISLAMFFVPMQASITMFVFIFVIGV 330 (460)
T ss_pred cCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHH-------HHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHH
Confidence 4433 33445666777888999999999999999884321 11111111 111111221112122233333343
Q ss_pred hhccccccccchhccccCC--------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 016374 309 GTDAFSQSGLYSNHQDIAP--------RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 361 (390)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~ 361 (390)
+.+. ..+....+..|..+ +..|...+.......+|..+++.+.|.+.+..||
T Consensus 331 ~~~~-~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 331 LHQL-VTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHH-HHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3322 22222333333322 2235556777789999999999999999887665
No 114
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.85 E-value=1.1e-18 Score=155.81 Aligned_cols=337 Identities=15% Similarity=0.124 Sum_probs=249.7
Q ss_pred cccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhh----hhhHHH-HHHHHHHHHHHHHHhhhhhh----hhHHHHHHH
Q 016374 8 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKAV-LGFGVVWWSIATALTPVAAK----LGLPFLLVV 78 (390)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~-l~~~~~~~~~~~~~~~~~~~----~~~~~l~~~ 78 (390)
..+.+|+++..+|.+..+.-+--++..|+.|.+.|| +||+|. ++.+.+..++...++-.+++ .+....++.
T Consensus 39 YTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vt 118 (467)
T COG2211 39 YTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVT 118 (467)
T ss_pred HhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHH
Confidence 467789999999999999999999999999999995 887666 77888888888888877772 234566677
Q ss_pred HHHHhhccccchhhhhHHhhhccc-CCchhHHHHHHHHhhhhhhHhHHhhHHHHhh-------hcCChHHHHHHHHHHHH
Q 016374 79 RVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIH-------RFGWPSVFYSFGSLGTV 150 (390)
Q Consensus 79 r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------~~gw~~~f~~~~~~~~~ 150 (390)
-.+.+++.+....+-.++.+|+.+ ++||.+..++-+.+.++|..+...+...+.+ ..||+..-.+.++++.+
T Consensus 119 Y~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i 198 (467)
T COG2211 119 YMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVI 198 (467)
T ss_pred HHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHH
Confidence 888999999999999999999984 7899999999999999998777666665553 34788888888888888
Q ss_pred HHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhc
Q 016374 151 WFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL 230 (390)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 230 (390)
..+.+++..+|++.+..+.++.++ ...+..+..++|||.+...++...+..............|.+...
T Consensus 199 ~~l~~~~~v~ER~~~~~~~~~~~~-----------~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~l 267 (467)
T COG2211 199 LLLFCFFNVKERVVETQPTKTGVK-----------LKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVL 267 (467)
T ss_pred HHHHHHHHhhcccCccccCccccc-----------ccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEc
Confidence 888888888887653332221111 011223446789999999988888888888888888899999888
Q ss_pred CCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhh
Q 016374 231 HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGT 310 (390)
Q Consensus 231 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (390)
|.++............+.+++.++..++.+|+|+|+.... +..+...+.........++..+.+...++....
T Consensus 268 g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~-------~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g 340 (467)
T COG2211 268 GDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLI-------GLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVG 340 (467)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHH-------HHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHH
Confidence 8888888888888888888889999999999999954332 222222222222222234444444443443333
Q ss_pred ccccccccchhccccCC--------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCch
Q 016374 311 DAFSQSGLYSNHQDIAP--------RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWD 362 (390)
Q Consensus 311 ~~~~~~~~~~~~~~~~~--------~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~ 362 (390)
....++....+..|..+ +..|...|...+..-+|.+++..+.|++.+..||.
T Consensus 341 ~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gyv 400 (467)
T COG2211 341 TGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGYV 400 (467)
T ss_pred hhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 44444555555444332 34688999999999999999999999999876554
No 115
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.85 E-value=2.8e-19 Score=155.49 Aligned_cols=360 Identities=15% Similarity=0.119 Sum_probs=261.0
Q ss_pred ccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh----hHH--HHHHHHHHH
Q 016374 9 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL----GLP--FLLVVRVFM 82 (390)
Q Consensus 9 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~----~~~--~l~~~r~l~ 82 (390)
.+-++ +.+..-|..-+|++.+....+++-|+.||+|-|...+++..+.++|..+-..+... .++ ....+..+.
T Consensus 72 ~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~ia 150 (480)
T KOG2563|consen 72 NSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIA 150 (480)
T ss_pred HHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHH
Confidence 34455 67778899999999999999999999999999999999999999999987665421 334 667889999
Q ss_pred hhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhc------CChH--HHHHHHHHHHHHHHH
Q 016374 83 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF------GWPS--VFYSFGSLGTVWFTV 154 (390)
Q Consensus 83 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------gw~~--~f~~~~~~~~~~~~~ 154 (390)
+.++-........+..-|++++||..+..+-..+..+|.+++.++...+..+- .|.. .|+....+..+.+.+
T Consensus 151 a~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l 230 (480)
T KOG2563|consen 151 AAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLAL 230 (480)
T ss_pred HHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99888777777788888999999999999999999999999988888776532 3544 355445555554455
Q ss_pred HHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcc
Q 016374 155 WLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNL 234 (390)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 234 (390)
..+..+++|+..+...+...+ +..-..+.++.++|+++....+.+......+++..+.+-.-+.. .|++.
T Consensus 231 ~~~~~~~~P~tPps~s~~~~~---------~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~ 300 (480)
T KOG2563|consen 231 VLFVFTKKPPTPPSASQAALQ---------DASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEG 300 (480)
T ss_pred HHHhcCCCCCCCCchhHhhhh---------cCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCc
Confidence 555555555443332222221 11124567789999999999998888888888887777766665 47887
Q ss_pred cchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH-HHHHHHHHhcCCchHHHHHHHHHHhhhccc
Q 016374 235 TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG-PAFFLTQLSHVDSPAMAVLCMACSQGTDAF 313 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (390)
..+|.......+++++++.+.|.+.||.++-|.... ......... ..+...........+.+.....++.+....
T Consensus 301 ~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~----v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~ 376 (480)
T KOG2563|consen 301 VFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTL----VLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGY 376 (480)
T ss_pred cccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH----HHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCC
Confidence 899999999999999999999999999876542211 111111111 111111122334455666667777777777
Q ss_pred cccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC----chhHHHHHHHHHHHHHHHHHHhh
Q 016374 314 SQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS----WDDVFKVSVGLYLVGTAVWNLFS 383 (390)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g----~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
.+...-...+...|..-++..|+.+..+++-+.+-..+.+...+..+ +...-+.....+.+...+..+++
T Consensus 377 ~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r 450 (480)
T KOG2563|consen 377 LPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFR 450 (480)
T ss_pred CCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhh
Confidence 66666666778889888899999999999999999999999888766 55555666666666665555543
No 116
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.83 E-value=2.5e-18 Score=152.22 Aligned_cols=369 Identities=14% Similarity=0.105 Sum_probs=238.6
Q ss_pred cCcCcchHHHHHHHHHHHHHHHHHhhHHhhhh-hhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccch
Q 016374 12 FNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAM 90 (390)
Q Consensus 12 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 90 (390)
+|.|+++..-+.+.|..-.-+...++|+++|| .|+|++++.+.+++.+|.++.+.++..+...++++-++.++|.|..-
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K 135 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFK 135 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccccc
Confidence 55999999888999988888899999999999 89999999999999999999988831157788999889999999999
Q ss_pred hhhhHHhhhcccCC--chhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCC---CCC
Q 016374 91 PAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS---PAE 165 (390)
Q Consensus 91 ~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~---~~~ 165 (390)
+...+++.|.+|++ +|...+++...+.++|+.++|.+.+++.+.+||+..|...++-..+.++..+...+.- +..
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~ 215 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGV 215 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCC
Confidence 99999999999764 4788899999999999999999999999999999999988776666655444333211 111
Q ss_pred CC-CC-chhhhhhh---------hh---ccc----------------------CCCCCCcchhhhhhcCchhHHHHHHHH
Q 016374 166 DP-QL-RPAEKKLI---------VS---SCA----------------------SKEPVKTIPWGLILSKPPVWALIVSHF 209 (390)
Q Consensus 166 ~~-~~-~~~~~~~~---------~~---~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (390)
++ .. +..+.... .. ... +....++.. .+.-|-.....+.+...
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~er~r~~~~~~Lfl~~~ 294 (498)
T COG3104 216 PDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVF-DERRRLLAAIPLFLFAV 294 (498)
T ss_pred CCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccH-HHHHHHHHHHHHHHHHH
Confidence 11 00 00000000 00 000 000000000 00000011223333333
Q ss_pred HHHHHHHHHhhchHHHHhHh-----cCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH
Q 016374 210 CHNWGTFILLTWMPTYYNQV-----LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGP 284 (390)
Q Consensus 210 ~~~~~~~~~~~~~~~~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 284 (390)
..+..+....+.+..|.++. +|+ +....+..+...+.-++.+++..++..|.++++.....-.+......+..+
T Consensus 295 iFW~~~~Q~~ssl~~~a~~~v~~~~~g~-~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~ 373 (498)
T COG3104 295 IFWALYEQMGSSLNLYADRNVNRQIFGF-EVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGL 373 (498)
T ss_pred HHHHHHHhccchHHHHHHHhhcccccce-ecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHH
Confidence 33333333334444444432 222 234567788888999999999999888865553211111122222222222
Q ss_pred HHHHHHH-----h----cCCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHH-
Q 016374 285 AFFLTQL-----S----HVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGY- 354 (390)
Q Consensus 285 ~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~- 354 (390)
+...... . ..+.++......+..++--...+.......+..|++..+..++..-.....++.++..+.+.
T Consensus 374 ~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~ 453 (498)
T COG3104 374 GFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLT 453 (498)
T ss_pred HHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccc
Confidence 2222211 1 12335555666677777777777777777788888889999998888888888888777763
Q ss_pred -----HHhcCCchhHHHHHHHHHHHHHHHHHHh
Q 016374 355 -----ILQHGSWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 355 -----l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
..+.......|+..+...++........
T Consensus 454 ~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~ 486 (498)
T COG3104 454 AVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLL 486 (498)
T ss_pred cccchhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 3344556677777777666665554443
No 117
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.81 E-value=2.6e-21 Score=179.92 Aligned_cols=357 Identities=14% Similarity=0.160 Sum_probs=3.0
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-------------
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA------------- 68 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~------------- 68 (390)
+..+..+.++|+++.++.|++.+.+-++..+..++..++.+|..|-|.+-.|.++++++.+++++-+
T Consensus 23 ~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~ 102 (539)
T PF03137_consen 23 NSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASN 102 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccc
Confidence 4567889999999999999999999999999999999999998898999999999999998876311
Q ss_pred -------------------------------h----hhHHHHHHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHH
Q 016374 69 -------------------------------K----LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALV 113 (390)
Q Consensus 69 -------------------------------~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 113 (390)
+ .-+..+++++++.|+|....++...+|+-|..++++-+..+|+.
T Consensus 103 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~ 182 (539)
T PF03137_consen 103 SNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGIL 182 (539)
T ss_dssp -------------------------------------------------SSS----------------------------
T ss_pred cccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhh
Confidence 0 01356778899999999999999999999999999999999999
Q ss_pred HHhhhhhhHhHHhhHHHHhhh---------------------cC-ChHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCch
Q 016374 114 YSGMYLGSVTGLAFSPFLIHR---------------------FG-WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRP 171 (390)
Q Consensus 114 ~~~~~~g~~~g~~~~~~l~~~---------------------~g-w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (390)
.....+|.++|..+++.+.+. .| |...|++.+.+.++..+..+.++++-|+.++..++
T Consensus 183 ~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~ 262 (539)
T PF03137_consen 183 YAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEE 262 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccch
Confidence 999999999999999877641 12 66677777877777776666665555544111111
Q ss_pred hhh---hh--h-hhcccCC---------CCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccc
Q 016374 172 AEK---KL--I-VSSCASK---------EPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTE 236 (390)
Q Consensus 172 ~~~---~~--~-~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 236 (390)
++. +. . .++.+++ ...-....+++++||.+....+..........++.++.|.|++.+++.++.+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~ 342 (539)
T PF03137_consen 263 KESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQ 342 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 000 00 0 0000000 0111234667899999999999999999999999999999999999999999
Q ss_pred hhhhhhHhHH-HHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHH-----------Hhc-----------
Q 016374 237 SGLFCVLPWL-TMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ-----------LSH----------- 293 (390)
Q Consensus 237 ~~~~~~~~~~-~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~----------- 293 (390)
++.+.....+ +.++|.+++|++.+|++-+.............+..+.....+.. ...
T Consensus 343 A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~ 422 (539)
T PF03137_consen 343 ASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCN 422 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCC
Confidence 9988766554 67788999999999987543222211111111111110111100 000
Q ss_pred -------------------------CCchHHHHHH-HHHHhhhccccccccchhccccCCCcchhHHHHHHHHHH-HHHH
Q 016374 294 -------------------------VDSPAMAVLC-MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGV-LAGV 346 (390)
Q Consensus 294 -------------------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~g~~ 346 (390)
.+....+.+. .+..+.......+......+.+++++|+.+.|+...+.. +|.+
T Consensus 423 ~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~I 502 (539)
T PF03137_consen 423 LTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFI 502 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCc
Confidence 0001112222 222333344445666667788889999999999886654 5889
Q ss_pred HHHHHHHHHHhc
Q 016374 347 FGTAATGYILQH 358 (390)
Q Consensus 347 ig~~i~g~l~~~ 358 (390)
-||.+.|.+.|.
T Consensus 503 PgPIifG~iiD~ 514 (539)
T PF03137_consen 503 PGPIIFGAIIDS 514 (539)
T ss_dssp ------------
T ss_pred chHHHHhHHHhh
Confidence 999999999997
No 118
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.76 E-value=3.1e-16 Score=142.47 Aligned_cols=317 Identities=17% Similarity=0.104 Sum_probs=225.1
Q ss_pred HHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccc--cchhhhhHHhhhcccC
Q 016374 26 FFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEG--VAMPAMNNILSKWVPV 103 (390)
Q Consensus 26 ~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~--~~~~~~~~~i~~~~~~ 103 (390)
..+...+.++..|.++||+|||..+........+......+.. +|.++ +.|+..+ .......++++|...+
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~---~~~~~----~~~l~g~~~~~~s~~~a~vadis~~ 143 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG---YWFFL----LLGLSGGFSAIFSVGFAYVADISSE 143 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH---HHHhh----hcccccchhhhhhhhhhheeeccch
Confidence 3677788999999999999999999999998888888777765 34433 4454433 4567788999999999
Q ss_pred CchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchhhhhhh-hhccc
Q 016374 104 AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLI-VSSCA 182 (390)
Q Consensus 104 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 182 (390)
++|...+++.......+..++|.+++.+.+..|.-.+|.+..+..++..+......||+.+++++.+....... .+...
T Consensus 144 ~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~ 223 (463)
T KOG2816|consen 144 EERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLDS 223 (463)
T ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcccc
Confidence 99999999999999999999999999999999999999999999999888888888887665544321110000 00000
Q ss_pred CCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhh-chHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHH-HHHH
Q 016374 183 SKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLT-WMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGG-WIAD 260 (390)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g-~l~d 260 (390)
....+........-++|..+.+.+..+........-.. ..+.|++..+++++.+.+.+.+.......+++.+.. .+..
T Consensus 224 ~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~ 303 (463)
T KOG2816|consen 224 SHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSS 303 (463)
T ss_pred hhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000011111122345566655555555555443333 557888888999999999999999999999998876 6777
Q ss_pred HHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHH
Q 016374 261 TLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTA 340 (390)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 340 (390)
.++.++ ....++..-..........+..|................+...........++++|++.++...+
T Consensus 304 ~l~~~~---------~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i 374 (463)
T KOG2816|consen 304 ILGEKR---------LISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGI 374 (463)
T ss_pred HHhhhh---------HhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHH
Confidence 778773 33344444444444444445555545554444444544455555556667789999999999999
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 016374 341 GVLAGVFGTAATGYILQH 358 (390)
Q Consensus 341 ~~~g~~ig~~i~g~l~~~ 358 (390)
..+...++|.+.+.++..
T Consensus 375 ~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 375 EGLSGVVSPALYGNIFAL 392 (463)
T ss_pred HHHhhhhhHHHHHHHHHH
Confidence 999999999999988654
No 119
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.76 E-value=3.4e-17 Score=152.58 Aligned_cols=264 Identities=17% Similarity=0.239 Sum_probs=211.0
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-------------
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA------------- 68 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~------------- 68 (390)
...+..+.+.|+++.++.|++.+.+-++..+...+..+...|.-|-|.+-.|.++++++.+++++-+
T Consensus 117 ~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~ 196 (735)
T KOG3626|consen 117 NSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVI 196 (735)
T ss_pred hhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhh
Confidence 3456788999999999999999999999999999999999999999999999999999999887531
Q ss_pred ----------------------------------hhh--HH-HHHHHHHHHhhccccchhhhhHHhhhcccCCchhHHHH
Q 016374 69 ----------------------------------KLG--LP-FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLA 111 (390)
Q Consensus 69 ----------------------------------~~~--~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 111 (390)
..+ .+ .++++.++.|+|....++...+|+-|...+++-...+|
T Consensus 197 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlg 276 (735)
T KOG3626|consen 197 KQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLG 276 (735)
T ss_pred hccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHH
Confidence 000 22 56678999999999999999999999999999999999
Q ss_pred HHHHhhhhhhHhHHhhHHHHhhhc------------------C-ChHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchh
Q 016374 112 LVYSGMYLGSVTGLAFSPFLIHRF------------------G-WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPA 172 (390)
Q Consensus 112 ~~~~~~~~g~~~g~~~~~~l~~~~------------------g-w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (390)
+......+|.++|-++++++...+ | |..-|++.+.+.++..+..+++.++.|+..++...+
T Consensus 277 i~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~ 356 (735)
T KOG3626|consen 277 ILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRAR 356 (735)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhh
Confidence 999999999999999999987521 1 677788888888888877777766666544332111
Q ss_pred hhhhhhhccc--CCCCC-------CcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhH
Q 016374 173 EKKLIVSSCA--SKEPV-------KTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVL 243 (390)
Q Consensus 173 ~~~~~~~~~~--~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 243 (390)
+.+....+.+ .+++. -....+++++||.+....+...+....+.++.+++|.|+++++|.++..+..+...
T Consensus 357 ~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~ 436 (735)
T KOG3626|consen 357 DLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGS 436 (735)
T ss_pred hhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhh
Confidence 1111111111 01111 12346678899999999999999999999999999999999999999999988866
Q ss_pred hHH-HHHHHHHHHHHHHHHHHhc
Q 016374 244 PWL-TMAFSANLGGWIADTLVSK 265 (390)
Q Consensus 244 ~~~-~~~~~~~~~g~l~d~~~~~ 265 (390)
..+ +..+|.+++|++..|+..+
T Consensus 437 i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 437 IGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred hhhhhhhhhhhccceeeeeeccc
Confidence 665 5567788899999988755
No 120
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.75 E-value=1e-16 Score=143.66 Aligned_cols=359 Identities=18% Similarity=0.188 Sum_probs=230.2
Q ss_pred ccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhh-HHHHHHHHHHHHHHHHHh-hhh--hhhhHHHHHHHHHHHhhcc
Q 016374 11 EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG-KAVLGFGVVWWSIATALT-PVA--AKLGLPFLLVVRVFMGIGE 86 (390)
Q Consensus 11 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~-~~~--~~~~~~~l~~~r~l~G~~~ 86 (390)
|.+.+.+..|++.++..++.+++++..|+...|.+. |+.++.+.++..+++++. ++. ++...+.++++|++.|+|.
T Consensus 65 D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~ 144 (488)
T KOG2325|consen 65 DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV 144 (488)
T ss_pred CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc
Confidence 477788899999999999999999999999999986 888999999999999988 333 3224688999999999997
Q ss_pred ccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhh--cC-----------ChHHHHHHHHHHHHHHH
Q 016374 87 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--FG-----------WPSVFYSFGSLGTVWFT 153 (390)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--~g-----------w~~~f~~~~~~~~~~~~ 153 (390)
+ ......+|+++....++|.|+++....+..+|..+||.++..+..- -| +..+-|+.+++.++..+
T Consensus 145 ~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v 223 (488)
T KOG2325|consen 145 G-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIV 223 (488)
T ss_pred c-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHH
Confidence 6 5677889999998899999999999999999999999888776531 11 23566778888888877
Q ss_pred HHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCc
Q 016374 154 VWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFN 233 (390)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 233 (390)
......+|..+...+.+.+++ +++..+++..+..+ +..+..+.+.+..+...+......+..+......++.+
T Consensus 224 ~i~~~f~E~~~~~~~~~~~~~---~~~~~~~~~~~~~~----~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~ 296 (488)
T KOG2325|consen 224 IILFFFKEVYRGIIDKKKRSV---EEEKSDIEKVKKPK----LDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWT 296 (488)
T ss_pred HHHhheeecccCccccccccc---hhhccchhhhccCC----hhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccc
Confidence 777777777665433322211 11111111100000 11123344555566666666666777777777777877
Q ss_pred ccchhhhhhHh-HHHHHHHHHH-HHHHHHHH---HhcCCchhHHHHHHHHHHHHHHHHHHHHHhcC--------------
Q 016374 234 LTESGLFCVLP-WLTMAFSANL-GGWIADTL---VSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV-------------- 294 (390)
Q Consensus 234 ~~~~~~~~~~~-~~~~~~~~~~-~g~l~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 294 (390)
.+++-...... .+.+++...+ .....-|. .+|+....+. .................
T Consensus 297 ~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~-----l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~ 371 (488)
T KOG2325|consen 297 GSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGF-----LIFFLSYYIFTYPWGFYSGPVQPYNTTYAGC 371 (488)
T ss_pred cchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehH-----HHHHHhhheeeeeccccccccccccccccCc
Confidence 66654443332 2222222222 22222232 2333222210 01111111111000000
Q ss_pred -------------CchHHHHH--HHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 016374 295 -------------DSPAMAVL--CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG 359 (390)
Q Consensus 295 -------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~ 359 (390)
.+.+.+.. .+.+|.............+++...|+++++..|........+..++|.+.-......
T Consensus 372 ~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~ 451 (488)
T KOG2325|consen 372 DFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS 451 (488)
T ss_pred CcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhc
Confidence 00111111 122233333333345556677888999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHh
Q 016374 360 SWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 360 g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
|+++.+.+.....++...+....
T Consensus 452 g~~~v~~~~~~~~l~~~~l~~~~ 474 (488)
T KOG2325|consen 452 GPRPVWIILLCLLLVVAALWIVF 474 (488)
T ss_pred CccHHHHHHHHHHHHHHHHHHHH
Confidence 99988888877777666655544
No 121
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.71 E-value=6.7e-17 Score=124.95 Aligned_cols=137 Identities=23% Similarity=0.417 Sum_probs=123.8
Q ss_pred HHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhhhHHhhhccc
Q 016374 23 QSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP 102 (390)
Q Consensus 23 ~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 102 (390)
.+.+.++..++.++.|++.||+|||+.+..+.....++.+...+.+ +.+.+.+.+++.|++.+...+....++.|.+|
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS--NITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 3456788899999999999999999999999999999998888888 89999999999999999889999999999999
Q ss_pred CCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 103 VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 103 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
+++|++..+..+....+|..+++.+.+.+.+..+|++.|++.+...++..+......||
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999999999999999888877776666655544
No 122
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.69 E-value=9e-16 Score=140.48 Aligned_cols=372 Identities=13% Similarity=0.054 Sum_probs=221.4
Q ss_pred cccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhh-----hhHHHHHHHHHHHHHHHHHhhhhhh--hhHHHHH
Q 016374 4 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-----GGKAVLGFGVVWWSIATALTPVAAK--LGLPFLL 76 (390)
Q Consensus 4 ~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~l~~~~~~~~~~~~~~~~~~~--~~~~~l~ 76 (390)
..|.+++++|+++++.....+...+...+ .++.|.++|-+ .||+-++++.++..++....+..+. .+.....
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~ 90 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAV 90 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHH
Confidence 34668899999999999999988888776 78999999975 3555577777777666666655442 1456666
Q ss_pred HHHHHHhhccccchhhhhHHhhhccc--CCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHH
Q 016374 77 VVRVFMGIGEGVAMPAMNNILSKWVP--VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTV 154 (390)
Q Consensus 77 ~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~ 154 (390)
+.-++..+|.......+-+++.|... +++|+...+.......+|.+++..++|.+.+..++|..|.+.+++..+..+.
T Consensus 91 ~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~ 170 (433)
T PF03092_consen 91 VLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIV 170 (433)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHH
Confidence 67788888888899999999999883 4458889999999999999999999999999999999999988887777666
Q ss_pred HHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHH-HHHHHHHHHHHHhhchHHHHhHhcC--
Q 016374 155 WLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIV-SHFCHNWGTFILLTWMPTYYNQVLH-- 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g-- 231 (390)
.....+|+++.++.......++..+.......+.....++.+++|.++...+ ..++.......-....-.+..+..+
T Consensus 171 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp 250 (433)
T PF03092_consen 171 ALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGP 250 (433)
T ss_pred HHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEecccccc
Confidence 6666665222111100000000000000000111234556777787776655 2222222211111100011122234
Q ss_pred -CcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHH----------hcCCchHHH
Q 016374 232 -FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL----------SHVDSPAMA 300 (390)
Q Consensus 232 -~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 300 (390)
+++...+.+..+..++.+++..+..+...+..-| ........+.....+... +..+.+...
T Consensus 251 ~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R--------~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~l 322 (433)
T PF03092_consen 251 HFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWR--------RIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFAL 322 (433)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH--------HHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEE
Confidence 6766666665555555555555444333333222 122222222211111100 011111111
Q ss_pred HHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------chhHHHHHHHHH
Q 016374 301 VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS--------WDDVFKVSVGLY 372 (390)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g--------~~~~~~~~~~~~ 372 (390)
.-..+..........+......+.+|+..-|+.+++..+..++|..++..++..+.+..+ .....++..++.
T Consensus 323 gd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ 402 (433)
T PF03092_consen 323 GDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQ 402 (433)
T ss_pred EhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHH
Confidence 122222333333334555566677788899999999999999999999999999887643 234444555555
Q ss_pred HHHHHHHHHhhc
Q 016374 373 LVGTAVWNLFST 384 (390)
Q Consensus 373 ~~~~~~~~~~~~ 384 (390)
++...+..++.+
T Consensus 403 ll~l~ll~lLp~ 414 (433)
T PF03092_consen 403 LLPLPLLFLLPP 414 (433)
T ss_pred HHHHHHHHHcCC
Confidence 455444444444
No 123
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.66 E-value=4.4e-14 Score=121.24 Aligned_cols=237 Identities=16% Similarity=0.190 Sum_probs=168.8
Q ss_pred cccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccc
Q 016374 8 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEG 87 (390)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 87 (390)
+-+++|.++.|++.+.........+..++.|.++||+|||+.-+.-.++.+++++. -..+ |++.++++|++.|++.+
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~--~~~~L~~GRvlgGiaTS 136 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSS--NYPVLLLGRVLGGIATS 136 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-Hhcc--ccHHHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999998864 4456 89999999999999999
Q ss_pred cchhhhhHH-hhhcc----cCCchhHHHHHHH-HhhhhhhHhHHhhHHHHhhhcCC--hHHHHHHHHHHHHHHHHHHhhc
Q 016374 88 VAMPAMNNI-LSKWV----PVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFGW--PSVFYSFGSLGTVWFTVWLSKA 159 (390)
Q Consensus 88 ~~~~~~~~~-i~~~~----~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~gw--~~~f~~~~~~~~~~~~~~~~~~ 159 (390)
....+--++ +.|.- |++..+..++... ...++-.+.+..++.++.+..+. ..+|........+..++....-
T Consensus 137 LLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W 216 (354)
T PF05631_consen 137 LLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTW 216 (354)
T ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcc
Confidence 988887775 44443 2233344444333 23334445555666677776654 7889887777777666655555
Q ss_pred cCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhh-chHHHHhHhcCCcccchh
Q 016374 160 HSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLT-WMPTYYNQVLHFNLTESG 238 (390)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~g~~~~~~~ 238 (390)
+|+..+..+..+..+.. +..++.+.+||+++.+.+...+.-..++.+.. |.|.. +. +-+...-|
T Consensus 217 ~ENyg~~~~~~~~~~~~------------~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL-~~--~~~~~P~G 281 (354)
T PF05631_consen 217 PENYGDTSSSSSLSGSF------------REAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPAL-DP--DDEELPLG 281 (354)
T ss_pred cccCCCcccccchHHHH------------HHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeecee-cC--CCCCCCch
Confidence 55543322111111110 23456678899999999999998888888765 45544 42 11334578
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHHH
Q 016374 239 LFCVLPWLTMAFSANLGGWIADTL 262 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~g~l~d~~ 262 (390)
++++.+.++.++|+.+..++..|.
T Consensus 282 lIFssFM~a~MlGS~lf~~l~s~~ 305 (354)
T PF05631_consen 282 LIFSSFMVAMMLGSSLFSRLLSKS 305 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999998887665543
No 124
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.64 E-value=3.5e-15 Score=136.85 Aligned_cols=149 Identities=15% Similarity=0.229 Sum_probs=128.6
Q ss_pred cchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh--hhHHHHHHHHHHHhhccccchhhh
Q 016374 16 PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK--LGLPFLLVVRVFMGIGEGVAMPAM 93 (390)
Q Consensus 16 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~ 93 (390)
.++.+...++..+...++.++.|++.||+|||+++..+.++.+++..+...... .+.+.+++.+++.|++.+...+..
T Consensus 250 ~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~ 329 (418)
T TIGR00889 250 VKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISG 329 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 366799999999999999999999999999999999999999888777666321 024567788999999998888888
Q ss_pred hHHhhhcccCCchhHHHHHHH-HhhhhhhHhHHhhHHHHhhh------cCChHHHHHHHHHHHHHHHHHHhhccCCCC
Q 016374 94 NNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHR------FGWPSVFYSFGSLGTVWFTVWLSKAHSSPA 164 (390)
Q Consensus 94 ~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~------~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 164 (390)
..++.|++|+++|++++++.+ ...++|..+||.++|.+.++ +||+..|.+.+++.++..++..++.+|+.+
T Consensus 330 ~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 330 SVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 999999999999999999997 67899999999999999987 469999999998888888888888776533
No 125
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.59 E-value=2.7e-14 Score=130.81 Aligned_cols=152 Identities=17% Similarity=0.160 Sum_probs=129.1
Q ss_pred cccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhc
Q 016374 6 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIG 85 (390)
Q Consensus 6 p~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 85 (390)
|...++.|. ++.++..+.+.++..++.++.|++.||+|||+.+..+..+.+++..+..+.+ |.+.+++.+++.|++
T Consensus 240 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~ 315 (399)
T PRK05122 240 TLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAP--SPWMALIGAALTGFG 315 (399)
T ss_pred HHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHh
Confidence 333344454 3456777888899999999999999999999999999888888888888887 778888889999999
Q ss_pred cccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 86 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
.+...+.....+.|..|+++|+++.++.+....+|..+++.+.+.+.++.||+..|++.+.+.++..+......++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 316 FSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9888888888888999999999999999999999999999999999999999999999888877776665555443
No 126
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.58 E-value=1.2e-14 Score=133.95 Aligned_cols=150 Identities=10% Similarity=0.073 Sum_probs=130.2
Q ss_pred cCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchh
Q 016374 12 FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMP 91 (390)
Q Consensus 12 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 91 (390)
.+.+..+.|++.++..++..++.+++|++.||+|||+.+..+.++.+++..+.++++ |.+.+.+.+++.|++.+...+
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~--~~~~~~~~~~l~g~~~~~~~~ 334 (420)
T PRK09528 257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFAT--GPLEVSILKLLHAFEVPFLLV 334 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHH
Confidence 355667889999999999999999999999999999999999999999988888888 888888999999998887778
Q ss_pred hhhHHhhhcccCCchhHHHHH-HHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCCC
Q 016374 92 AMNNILSKWVPVAERSRSLAL-VYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 163 (390)
Q Consensus 92 ~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (390)
....++.|.+|++.|+...+. .+....+|..++|.+.|++.|..|||..|.+.+++.++...+.+...++++
T Consensus 335 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 335 GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 888899999999988887655 667788999999999999999999999999988887776666665555433
No 127
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.56 E-value=3.2e-14 Score=131.00 Aligned_cols=159 Identities=13% Similarity=0.032 Sum_probs=137.4
Q ss_pred cccccccc-cCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Q 016374 4 AILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFM 82 (390)
Q Consensus 4 ~lp~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 82 (390)
..|.+.++ +|.++.+.+++.+...++..++.++.+++.||.++|+.+..+..+.+++.++..+.+ +.+...++.++.
T Consensus 245 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 322 (417)
T PRK10489 245 LYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMP--MWILAVLCLALF 322 (417)
T ss_pred hhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccc--hHHHHHHHHHHH
Confidence 34555555 899999999999999999999999999999998888888888888888888888888 777788889999
Q ss_pred hhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCC
Q 016374 83 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 162 (390)
Q Consensus 83 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (390)
|++.+...+...+++.|..|+++|++++++......+|..+||.+.+.+.+.+|++..+.+.+...++...+.....++.
T Consensus 323 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (417)
T PRK10489 323 GYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGEL 402 (417)
T ss_pred HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccc
Confidence 99888777777889999999999999999999999999999999999999999999999888877777666666666654
Q ss_pred CC
Q 016374 163 PA 164 (390)
Q Consensus 163 ~~ 164 (390)
++
T Consensus 403 ~~ 404 (417)
T PRK10489 403 RR 404 (417)
T ss_pred cc
Confidence 43
No 128
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.55 E-value=1.8e-13 Score=128.50 Aligned_cols=159 Identities=13% Similarity=0.116 Sum_probs=120.1
Q ss_pred cccc-ccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHH-h--hhhhhhhHHHHHHHHH
Q 016374 5 ILPM-SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL-T--PVAAKLGLPFLLVVRV 80 (390)
Q Consensus 5 lp~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~-~--~~~~~~~~~~l~~~r~ 80 (390)
+|.+ ++++|.++.+.++..+...++..++.+..|+++||+|||+.+..+.+...++... . ..++ +...++++++
T Consensus 273 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 350 (490)
T PRK10642 273 MPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSN--VIGLIFAGLL 350 (490)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHH
Confidence 4554 4567888888888888899999999999999999999999988877654433322 2 2233 5677888899
Q ss_pred HHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhc-CChHHHHHHHHHHHHHHHHHHhhc
Q 016374 81 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWFTVWLSKA 159 (390)
Q Consensus 81 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~ 159 (390)
+.|++.+........++.|.+|++.|+++++.......++..++|.+.+++.+.. +|+.+++...+.+++..+.. .+.
T Consensus 351 ~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~-~~~ 429 (490)
T PRK10642 351 MLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITG-VTM 429 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH-HHh
Confidence 9998777667777888999999999999999755555666788999999888764 47877776666666655444 455
Q ss_pred cCCCCCC
Q 016374 160 HSSPAED 166 (390)
Q Consensus 160 ~~~~~~~ 166 (390)
||+|++.
T Consensus 430 pes~~~~ 436 (490)
T PRK10642 430 KETANRP 436 (490)
T ss_pred ccccCCC
Confidence 8877653
No 129
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.55 E-value=4.4e-14 Score=128.21 Aligned_cols=147 Identities=12% Similarity=0.087 Sum_probs=126.9
Q ss_pred ccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhh
Q 016374 5 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGI 84 (390)
Q Consensus 5 lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 84 (390)
.+++.++++.++.+.++..+.+.++..++.++.|++.||+|||+.+..+..+..++.....+.+..+...++...++.|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 307 (377)
T TIGR00890 228 YKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFF 307 (377)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHH
Confidence 34456788988889999999999999999999999999999999999999998888887777662122334566788888
Q ss_pred ccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHH
Q 016374 85 GEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 151 (390)
Q Consensus 85 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~ 151 (390)
+.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.++.||++.|.+.+++.++.
T Consensus 308 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 308 TWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 8887778888899999999999999999999999999999999999999999999999887776654
No 130
>PRK10054 putative transporter; Provisional
Probab=99.55 E-value=2.2e-13 Score=124.27 Aligned_cols=174 Identities=13% Similarity=0.059 Sum_probs=123.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHH
Q 016374 198 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ 277 (390)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 277 (390)
+|.++.+.+..++...+......++|.|+++++|.++.+.++..+...++.+++++..|+++||++||+....+
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~------ 79 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLA------ 79 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHH------
Confidence 34567777888888889999999999999988999999999999999999999999999999999999543321
Q ss_pred HHHHHHHHHHHHHHhcCCchHHHHH-HHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016374 278 SIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL 356 (390)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~ 356 (390)
..............++.+..+. ..+.+.+.............+..++++|+++.|+.+...++|..++|.+.+.+.
T Consensus 80 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~ 156 (395)
T PRK10054 80 ---ITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV 156 (395)
T ss_pred ---HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111222233333222 223333323222222233345556788999999999999999999999999988
Q ss_pred hcCCchhHHHHHHHHHHHHHHHHHH
Q 016374 357 QHGSWDDVFKVSVGLYLVGTAVWNL 381 (390)
Q Consensus 357 ~~~g~~~~~~~~~~~~~~~~~~~~~ 381 (390)
+ .+|+..|...+++.+++.+...+
T Consensus 157 ~-~g~~~~f~~~~~~~~i~~i~~~~ 180 (395)
T PRK10054 157 M-QSINLPFWLAAICSAFPLVFIQI 180 (395)
T ss_pred H-hccCcHHHHHHHHHHHHHHHHHH
Confidence 6 68999999888877776554443
No 131
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.54 E-value=1.6e-13 Score=125.22 Aligned_cols=148 Identities=13% Similarity=0.094 Sum_probs=123.4
Q ss_pred cccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccc
Q 016374 8 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEG 87 (390)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 87 (390)
+++++|.++.+.+++.+.......++.++.|+++||+|||+.+..+.....+........+ +.+.+++.+++.+++.+
T Consensus 243 l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~g 320 (393)
T PRK15011 243 IINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAH--SPAILLGLQLLNAIYIG 320 (393)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHH
Confidence 4567899999999998888888889999999999999999988877766665555555566 77778888998888877
Q ss_pred cchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhh
Q 016374 88 VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 158 (390)
Q Consensus 88 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 158 (390)
...+....+..|..| ++|++++++.+...++|..++|.+++.+.+++||+..|.+.+++.++..+..+..
T Consensus 321 ~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 321 ILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 777777788899886 5699999999999999999999999999999999999998887777766555433
No 132
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.54 E-value=1.1e-13 Score=124.25 Aligned_cols=149 Identities=26% Similarity=0.398 Sum_probs=137.1
Q ss_pred ccccccc-cCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHH-HHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Q 016374 5 ILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKA-VLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFM 82 (390)
Q Consensus 5 lp~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 82 (390)
.|.+.++ +|.++.+.++..+...++..++.++.+++.||+|||+ .+..+..+..++.+.....+ +.+.+.+..++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~ 275 (352)
T cd06174 198 LPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP--SLALLLVALLLL 275 (352)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHH
Confidence 3444444 4889999999999999999999999999999999999 99999999999999999988 888899999999
Q ss_pred hhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHH
Q 016374 83 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 155 (390)
Q Consensus 83 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 155 (390)
|++.+...+....++.|..|+|+|++.++..+...++|..+++.+.+.+.+..+|+..+.+.+++.++..+..
T Consensus 276 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 276 GFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999988888776544
No 133
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.53 E-value=1.6e-13 Score=132.11 Aligned_cols=141 Identities=11% Similarity=0.048 Sum_probs=121.1
Q ss_pred HHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhhhHHhh
Q 016374 19 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILS 98 (390)
Q Consensus 19 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 98 (390)
..+...+..++..++.++.|+++||+|||++++.+.++.+++.++.++++ +...+++.+++.|++.+..++...++++
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~--s~~~ll~~~~l~g~~~~~~~~~~~a~~a 674 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGN--SESAMIALLCLFGGLSIAAWNALDVLTV 674 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556678899999999999999999999999999999999999999988 7777888888888888888899999999
Q ss_pred hcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCCC
Q 016374 99 KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 163 (390)
Q Consensus 99 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (390)
|++|.++|++++|+......+|.+++|.+++.+.+. +...+|++.+++.++..++.. ++||+.
T Consensus 675 El~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~-~LPET~ 737 (742)
T TIGR01299 675 ELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLAL-KLPDTR 737 (742)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHH-hCCCCc
Confidence 999999999999999999999999999999988774 456788877777766655444 446644
No 134
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.53 E-value=8.7e-14 Score=127.82 Aligned_cols=141 Identities=18% Similarity=0.182 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhhhHHhh
Q 016374 19 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILS 98 (390)
Q Consensus 19 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 98 (390)
.+.+.+...++..++.+..|++.||+|||+.+..+..+..++.+...+.+ +.+.+++.+++.|++.+...+...+++.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 337 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQ--TPLQLGILRFLLGAADGALLPAVQTLLV 337 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHhhhHhhHHHHHHHHH
Confidence 45666777888889999999999999999999999888888887777777 7888889999999999999999999999
Q ss_pred hcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 99 KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 99 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
+..|+++|++.++..+....+|..+||.+++.+.++.||+..|++.+++.++..+..++..++
T Consensus 338 ~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~ 400 (408)
T PRK09874 338 YNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRR 400 (408)
T ss_pred HhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988888776665554433
No 135
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.52 E-value=2.4e-13 Score=124.79 Aligned_cols=152 Identities=15% Similarity=0.042 Sum_probs=126.5
Q ss_pred ccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhh
Q 016374 5 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGI 84 (390)
Q Consensus 5 lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 84 (390)
.|.+.++.|.++.+.+...+.+.++..++.++.|++.||+|||+.+..+.....++.....+.+ +.+.+.+..++.|+
T Consensus 243 ~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~ 320 (406)
T PRK11551 243 LPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAP--SFAGMLLAGFAAGL 320 (406)
T ss_pred HHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHH
Confidence 4666778899999999999999999999999999999999999998887777777777777777 77777778888888
Q ss_pred ccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcC-ChHHHHHHHHHHHHHHHHHHhh
Q 016374 85 GEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVWLSK 158 (390)
Q Consensus 85 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~ 158 (390)
+.+...+...+++.|.+|+++|++.+++.+....+|..++|.+++.+.++.+ |+..+++.....++.....+..
T Consensus 321 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 321 FVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 8777788889999999999999999999999999999999999999988754 5566665555555544444433
No 136
>PRK12382 putative transporter; Provisional
Probab=99.51 E-value=1.8e-13 Score=124.96 Aligned_cols=150 Identities=20% Similarity=0.197 Sum_probs=128.8
Q ss_pred cccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhc
Q 016374 6 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIG 85 (390)
Q Consensus 6 p~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 85 (390)
|...++.+.+ +.++..+.+.++..+++++.|++.||+||||.+..+..+.+++.++..+.+ +.+.+.+.+++.|++
T Consensus 240 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~ 315 (392)
T PRK12382 240 SLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAP--TAWVALAGAALTGAG 315 (392)
T ss_pred HHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcc--cHHHHHHHHHHHHHH
Confidence 3444555554 356667778888899999999999999999999999999999888888887 788888899999999
Q ss_pred cccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhc
Q 016374 86 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 159 (390)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 159 (390)
.+...+.....+.|.+|+|+|+++.++.+....+|..++|.+.+.+.++.||+..|.+.+.+.++..+..+...
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 316 CSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred HHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhc
Confidence 88888888888999999999999999999999999999999999999999999999998888777766555443
No 137
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.51 E-value=1.1e-12 Score=120.51 Aligned_cols=176 Identities=13% Similarity=0.160 Sum_probs=123.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHH-HhcCCchhHHHHHH
Q 016374 198 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL-VSKGLSVTTVRKIM 276 (390)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~ 276 (390)
.+.++......+...+.+++...++|.|+++.+|+++.+++.+.........++.+++|+++||+ ||||....+
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG----- 82 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLG----- 82 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHH-----
Confidence 34566777777888889999999999999998999999999999999999999999999999999 998543222
Q ss_pred HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchhc-cccCCC--cchhHHHHHHHHHHHHHHHHHHHHH
Q 016374 277 QSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNH-QDIAPR--YSGVLLGLSNTAGVLAGVFGTAATG 353 (390)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~g~~~~~~~~g~~ig~~i~g 353 (390)
......+..+................+...+.+... +....+. +..+++ +|.++.++.....++|+.++|.+.|
T Consensus 83 --~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~-~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g 159 (493)
T PRK15462 83 --ALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFK-SNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACG 159 (493)
T ss_pred --HHHHHHHHHHHHHhhcchhHHHHHHHHHHHhccccc-ccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHH
Confidence 111111111111111111222222223333333332 3333333 444443 6999999999999999999999999
Q ss_pred HHHhcCCchhHHHHHHHHHHHHHHHHHH
Q 016374 354 YILQHGSWDDVFKVSVGLYLVGTAVWNL 381 (390)
Q Consensus 354 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 381 (390)
++.+..||+..|...++.++++.+.+..
T Consensus 160 ~L~~~~Gw~~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 160 YAQEEYSWAMGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred HHHhhhChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988777776666544
No 138
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.51 E-value=1.8e-13 Score=129.10 Aligned_cols=146 Identities=12% Similarity=0.137 Sum_probs=115.2
Q ss_pred ccccc-cccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHh
Q 016374 5 ILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMG 83 (390)
Q Consensus 5 lp~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 83 (390)
+|.+. +++|.++.+.+++.+...++..++.++.|+++||+|||+++..+..+..+..+........+.+.+....++.+
T Consensus 298 lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (496)
T PRK03893 298 LPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQ 377 (496)
T ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHH
Confidence 45555 58999999999999999999999999999999999999998888777666655444333114444445555544
Q ss_pred hccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHH
Q 016374 84 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 150 (390)
Q Consensus 84 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~ 150 (390)
.......+....++.|.+|+++|++.+++......+|..+||.+++.+.+.+||+..+...+....+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 378 MLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 4333345667788999999999999999999999999999999999999999999888665544433
No 139
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.50 E-value=2.9e-13 Score=117.67 Aligned_cols=179 Identities=11% Similarity=0.074 Sum_probs=140.7
Q ss_pred chhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHH
Q 016374 199 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 278 (390)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 278 (390)
+.+....+.+...++..-.+..-.|...++ .++|..|.|.+.+...+..-++..+.|.++||.+.|+. +.
T Consensus 29 qif~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~f---------m~ 98 (448)
T COG2271 29 QIFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYF---------MA 98 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcee---------eh
Confidence 345566666777777777778888877777 68999999999999999999999999999999999944 34
Q ss_pred HHHHHHHHHHHHHhcCCchHHHHHH-HHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHH--HHH
Q 016374 279 IGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAAT--GYI 355 (390)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~--g~l 355 (390)
.+++..++.-......++...+..+ .+-+.+.+...++..-.+..-.++++||+..++.|+..++|+.+.|.+. +.+
T Consensus 99 ~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~ 178 (448)
T COG2271 99 FGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFF 178 (448)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHH
Confidence 4555555555555555555544444 4456777766666667777777789999999999999999999999999 999
Q ss_pred HhcCCchhHHHHHHHHHHHHHHHHHHhhcCCC
Q 016374 356 LQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK 387 (390)
Q Consensus 356 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (390)
.++.+|+..|++-+++.++..++.++..|++.
T Consensus 179 ~~~~~w~~~f~~pgiiaiival~~~~~~rd~P 210 (448)
T COG2271 179 AFHGGWRAAFYFPGIIAIIVALILLFLLRDRP 210 (448)
T ss_pred HhccchhHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999999999999998888777776655543
No 140
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.50 E-value=1.1e-12 Score=121.29 Aligned_cols=170 Identities=14% Similarity=0.060 Sum_probs=118.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 016374 200 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI 279 (390)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 279 (390)
.+....+..++.+.....+....|.+.++ +|.++.+.+.+.+...++..++++..|++.||+|+|+....
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~--------- 93 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGI--------- 93 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHH---------
Confidence 34445555555555566777888888887 79999999999999999999999999999999999954322
Q ss_pred HHHHHHHHHHHHhcCCchHHH-HHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016374 280 GFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 358 (390)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~ 358 (390)
+..............++.+.. ....+.+.+.+...........+..++++|++++|+.+....+|..++|.+.+.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 173 (434)
T PRK11663 94 GLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH 173 (434)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 222222222222222333333 2233334444433333333444555567899999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHH
Q 016374 359 GSWDDVFKVSVGLYLVGTAVW 379 (390)
Q Consensus 359 ~g~~~~~~~~~~~~~~~~~~~ 379 (390)
.||+..|.+.++..++..+..
T Consensus 174 ~gw~~~f~~~~i~~~~~~~~~ 194 (434)
T PRK11663 174 YGWRYGMMIAGIIAIVVGLFL 194 (434)
T ss_pred ccHHHHHHHHHHHHHHHHHHH
Confidence 999999998877665544433
No 141
>PRK03545 putative arabinose transporter; Provisional
Probab=99.50 E-value=9.1e-13 Score=120.25 Aligned_cols=149 Identities=15% Similarity=0.077 Sum_probs=122.5
Q ss_pred ccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHH-HhhhhhhhhHHHHHHHHHHHhhc
Q 016374 7 PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA-LTPVAAKLGLPFLLVVRVFMGIG 85 (390)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~~~l~~~r~l~G~~ 85 (390)
.+.++.|.|+.+.+++.+...++..++.++.|++.||+|||+.. .+..+..++.. .....+ +.+.+.+..++.|++
T Consensus 231 ~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~--~~~~~~~~~~l~g~~ 307 (390)
T PRK03545 231 FVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAAN--SEWHLSVLSIFWGIA 307 (390)
T ss_pred HHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhc--hHHHHHHHHHHHHHH
Confidence 34566899999999999999999999999999999999988754 44444444433 334555 778888889999998
Q ss_pred cccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhc
Q 016374 86 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 159 (390)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 159 (390)
.+...+.....+.|..| ++|++++++......+|..+||.++|.+.|++|++..|++.+.+.++..+......
T Consensus 308 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 308 IMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 87777777888888775 78999999999999999999999999999999999999999888887766655554
No 142
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.49 E-value=5.6e-13 Score=121.00 Aligned_cols=146 Identities=12% Similarity=0.078 Sum_probs=124.7
Q ss_pred cccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccc
Q 016374 8 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEG 87 (390)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 87 (390)
+.+++|.++.+.+++.+........+.++.|++.||+|||+.+..+.+...+......+.+ +.+.+...+++.|++.+
T Consensus 226 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~g 303 (375)
T TIGR00899 226 IIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADN--SLWALLMLQLLNAIFIG 303 (375)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 3577899999999998888888888999999999999999998888777666666666666 77888888999999988
Q ss_pred cchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHH
Q 016374 88 VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 156 (390)
Q Consensus 88 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 156 (390)
...+....++.|..| +++++++++.+....+|..++|.+++.+.+..||+..|++.++..++..+...
T Consensus 304 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 304 ILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 888888889999886 56679999999999999999999999999999999999988887777655443
No 143
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.49 E-value=2.7e-12 Score=120.33 Aligned_cols=179 Identities=15% Similarity=0.160 Sum_probs=120.5
Q ss_pred hhcCc-hhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHH-HHhcCCchhHH
Q 016374 195 ILSKP-PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT-LVSKGLSVTTV 272 (390)
Q Consensus 195 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~ 272 (390)
.+|+| .++......++..++++....+++.|+++.+|.++.+++..............+++|++.|| +|||+....
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~-- 93 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIML-- 93 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHH--
Confidence 45666 48888888889999999999999999999899999888877777665555556789999999 599843322
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchhccccCCC--cchhHHHHHHHHHHHHHHHHHH
Q 016374 273 RKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPR--YSGVLLGLSNTAGVLAGVFGTA 350 (390)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~ig~~ 350 (390)
.......+..+................+.+.+.+...+.......+..+++ ++..+.++.+...++|..++|.
T Consensus 94 -----g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~ 168 (500)
T PRK09584 94 -----GAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSML 168 (500)
T ss_pred -----HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHH
Confidence 211111121221121112222233334445554444433333444444433 3556788889999999999999
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Q 016374 351 ATGYILQHGSWDDVFKVSVGLYLVGTAVWN 380 (390)
Q Consensus 351 i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 380 (390)
+.|++.|+.||+..|.+.++...++.+.+.
T Consensus 169 i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~ 198 (500)
T PRK09584 169 ATPWLAAKYGWSVAFALSVVGMLITVVNFA 198 (500)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988876666554433
No 144
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.49 E-value=7.3e-13 Score=120.46 Aligned_cols=147 Identities=16% Similarity=0.143 Sum_probs=122.5
Q ss_pred ccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhh
Q 016374 5 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGI 84 (390)
Q Consensus 5 lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 84 (390)
+|...++.|.++++.++..+...++..+++++.|++.||+|+|+++..+.....++..... + + .......++.|+
T Consensus 223 lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~--~-~~~~~~~~l~g~ 297 (381)
T PRK03633 223 MPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S--Q-AAMAPALFILGA 297 (381)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h--h-HHHHHHHHHHHH
Confidence 4666677899999999999999999999999999999999999999888888777665443 2 2 223456677787
Q ss_pred ccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHH
Q 016374 85 GEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 156 (390)
Q Consensus 85 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 156 (390)
+.....|...+.+.|..|+++++...+......++|..+||.++|++.|++||++.|.+.+.+.++.....+
T Consensus 298 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 298 AGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 777778999999999998888888888888899999999999999999999999999998887776644433
No 145
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.49 E-value=3e-13 Score=126.25 Aligned_cols=150 Identities=14% Similarity=0.053 Sum_probs=115.3
Q ss_pred ccc-cccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHH--hhhhhhhhHHHHHHHHHH
Q 016374 5 ILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL--TPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 5 lp~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~--~~~~~~~~~~~l~~~r~l 81 (390)
+|. +++++|.|..+.++..+...++..++.+++|+++||+|||+.+........++... ....+ +...+.+.+++
T Consensus 281 ~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 358 (467)
T PRK09556 281 SPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHAT--SEYMYLASLFA 358 (467)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcC--cHHHHHHHHHH
Confidence 454 45779999999999999999999999999999999999998876655444443322 22334 56666678888
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhh-hhHhHHhhHHHHhh------------hcCChHHHHHHHHHH
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYL-GSVTGLAFSPFLIH------------RFGWPSVFYSFGSLG 148 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~------------~~gw~~~f~~~~~~~ 148 (390)
.|+..............|.+|+++|+.+.|+.+...++ |..++|.+.|.+.| ..||+..|++..+..
T Consensus 359 ~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~ 438 (467)
T PRK09556 359 LGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAA 438 (467)
T ss_pred HHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHH
Confidence 88654333333346677999999999999999998886 77999999999999 578999999887777
Q ss_pred HHHHHHHH
Q 016374 149 TVWFTVWL 156 (390)
Q Consensus 149 ~~~~~~~~ 156 (390)
++..+..+
T Consensus 439 ~~~~~~~~ 446 (467)
T PRK09556 439 IGCICLMA 446 (467)
T ss_pred HHHHHHHH
Confidence 66654444
No 146
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.49 E-value=1.3e-13 Score=128.12 Aligned_cols=147 Identities=15% Similarity=0.197 Sum_probs=123.0
Q ss_pred ccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhh--hhhHHHHH--HHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Q 016374 5 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT--VGGKAVLG--FGVVWWSIATALTPVAAKLGLPFLLVVRV 80 (390)
Q Consensus 5 lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr--~Grr~~l~--~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 80 (390)
+|++.+++|.++.+.++..+...++..++.++.|++.|| +++|+... .+....+++.++....+ |++.+++.++
T Consensus 264 l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~--~~~~~~i~~~ 341 (455)
T TIGR00892 264 LVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG--DYTGLVIYCI 341 (455)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc--hHHHHHHHHH
Confidence 456667889999999999999999999999999999997 33444333 33444455555666777 8888899999
Q ss_pred HHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhc-CChHHHHHHHHHHHHHHH
Q 016374 81 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWFT 153 (390)
Q Consensus 81 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~f~~~~~~~~~~~~ 153 (390)
+.|++.+...+...+++.|.+|++++++.+++.+...++|..+||.+++.+.+.. +|++.|++.+++.++..+
T Consensus 342 ~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 342 FFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 9999999888999999999999999999999999999999999999999999877 599999988877666543
No 147
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.49 E-value=7e-13 Score=120.55 Aligned_cols=146 Identities=12% Similarity=0.058 Sum_probs=131.8
Q ss_pred ccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhh
Q 016374 5 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGI 84 (390)
Q Consensus 5 lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 84 (390)
.|...+|+|.++.++|.+.+...++..+..++.+++.||+|+|+.+..+.+...+.....++++ |.+.+++.+.++|+
T Consensus 228 ~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~q~l~g~ 305 (382)
T TIGR00902 228 SAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIE--AFPLIFLLQILHCG 305 (382)
T ss_pred HHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHh--hHHHHHHHHHHHHH
Confidence 3555577999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred ccccchhhhhHHhhhcccCCchhHHHHHHH-HhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHH
Q 016374 85 GEGVAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTV 154 (390)
Q Consensus 85 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~ 154 (390)
+.+...+....++.+. |+++|++..++++ ...++|..+++.++|.+.|++|+ ..|++.+.+.++..++
T Consensus 306 ~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 306 TFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9999999999999998 8999999999986 57789999999999999999986 6687777777765433
No 148
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.48 E-value=2.7e-12 Score=119.53 Aligned_cols=177 Identities=12% Similarity=0.087 Sum_probs=126.3
Q ss_pred cCc-hhHHHHHHHHHHHHHHHHHhhchHHHHhHh--cCCcccchhhhhhHhHHHHHHHHHHHHHHHHH-HHhcCCchhHH
Q 016374 197 SKP-PVWALIVSHFCHNWGTFILLTWMPTYYNQV--LHFNLTESGLFCVLPWLTMAFSANLGGWIADT-LVSKGLSVTTV 272 (390)
Q Consensus 197 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~ 272 (390)
++| .++.+.+..++..++++....++|.|+++. +|.++.+++...+.......++++++|+++|| +|||+...
T Consensus 7 ~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~--- 83 (475)
T TIGR00924 7 GHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMV--- 83 (475)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHH---
Confidence 444 455666677777899999999999999987 89999999999999999999999999999999 79994322
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCch-HHHHHHHHHHhhhccccccccchhccccCCC---cchhHHHHHHHHHHHHHHHH
Q 016374 273 RKIMQSIGFLGPAFFLTQLSHVDSP-AMAVLCMACSQGTDAFSQSGLYSNHQDIAPR---YSGVLLGLSNTAGVLAGVFG 348 (390)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~ig 348 (390)
.+..............++. ...+...+.+.+.+...+.......+..+++ +|+++.++.+...++|..+|
T Consensus 84 ------~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig 157 (475)
T TIGR00924 84 ------LGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFIS 157 (475)
T ss_pred ------HHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHH
Confidence 2222222222222222333 3333444455554444333333334444443 48889999999999999999
Q ss_pred HHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh
Q 016374 349 TAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 349 ~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
|.+.+++.++.||+..|...++..+++.+.+...
T Consensus 158 ~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~ 191 (475)
T TIGR00924 158 PLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAG 191 (475)
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999899999999887777665554443
No 149
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.48 E-value=1.7e-12 Score=118.56 Aligned_cols=171 Identities=18% Similarity=0.239 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Q 016374 202 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGF 281 (390)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 281 (390)
+......++...+.+....++|.|++++.|.|+.+.|+..+...+...+.+++.|+++||+++|+.... +.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~---------~~ 83 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVT---------GM 83 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHH---------HH
Confidence 445577778888888889999999988899999999999999999999999999999999999854322 22
Q ss_pred HHHHHHHHHHhcCCchH-HHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 016374 282 LGPAFFLTQLSHVDSPA-MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 360 (390)
Q Consensus 282 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g 360 (390)
.............++.+ ......+.+.+.+...+.......+..++|+|+++.|+.+....+|..+||.+.|.+. ..+
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g 162 (400)
T PRK11646 84 LMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYD 162 (400)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh
Confidence 22222222222223333 3344444454443333333344455567789999999999999999999999999998 568
Q ss_pred chhHHHHHHHHHHHHHHHHHHh
Q 016374 361 WDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
|+..|++.+...++..++..+.
T Consensus 163 ~~~~f~~~~~~~~~~~i~~~~~ 184 (400)
T PRK11646 163 FRLVCATGAVLFVLAAAFNAWL 184 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999998887776665544333
No 150
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.47 E-value=1.3e-10 Score=102.96 Aligned_cols=332 Identities=11% Similarity=0.062 Sum_probs=219.5
Q ss_pred cccccc-cCcCcchHH-HHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHh
Q 016374 6 LPMSAE-FNWNPATVG-LIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMG 83 (390)
Q Consensus 6 p~i~~~-~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 83 (390)
|.+.++ .|.+++|+. -+.-...-.+....++...+.|..+.|++++.+.+...+...+.-+.+ +...+-+..+..|
T Consensus 28 ~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~--sv~~mq~~q~~yg 105 (412)
T PF01770_consen 28 PYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGT--SVLAMQLMQFFYG 105 (412)
T ss_pred HHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHC--cHHHHHHHHHHHH
Confidence 334444 788887764 456677777888899999999999999999999999999999999999 9999999999999
Q ss_pred hccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhh--cCChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 84 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--FGWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 84 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--~gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
++.+ ...+-.+++-...|+++-.++.+...+..-+|..++..+|..+.+. .+.+...++......+.. ++.+++|.
T Consensus 106 ~~~a-~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~-~~~~fLP~ 183 (412)
T PF01770_consen 106 LATA-AEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLAL-LIALFLPM 183 (412)
T ss_pred HHHH-HHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH-HHHHHcCC
Confidence 9977 4777889999999999999999999999999999999999988773 334555555443333333 33334444
Q ss_pred CCCC----CCCCc-----hhhhhh---hhhcc---cCCCCCC-----------cchhhhhhcCchhHHHHHHHHHHHHHH
Q 016374 162 SPAE----DPQLR-----PAEKKL---IVSSC---ASKEPVK-----------TIPWGLILSKPPVWALIVSHFCHNWGT 215 (390)
Q Consensus 162 ~~~~----~~~~~-----~~~~~~---~~~~~---~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (390)
.++. ++... +.+.+. ..++. +++++.. ..++++..++|.++...+-+.+...++
T Consensus 184 ~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy 263 (412)
T PF01770_consen 184 PKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGY 263 (412)
T ss_pred CCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHH
Confidence 3321 11000 000000 00000 0000000 013455667899998888888888889
Q ss_pred HHHhhchHHHHhHh--cCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhc
Q 016374 216 FILLTWMPTYYNQV--LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH 293 (390)
Q Consensus 216 ~~~~~~~~~~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (390)
..+..|.....++. .+-+....|..-+...+.+.++.+..|++-.+..+. ....+.......+..+.....
T Consensus 264 ~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~-------~~l~l~~~S~l~a~~L~lm~~ 336 (412)
T PF01770_consen 264 YQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW-------GELALGVFSLLQAGLLFLMSF 336 (412)
T ss_pred HHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH-------HHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888775 233344457777777788888888888884444443 123333344444444444455
Q ss_pred CCchHHHHHHH-HHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHH
Q 016374 294 VDSPAMAVLCM-ACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFG 348 (390)
Q Consensus 294 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig 348 (390)
.++.+...... ++..............++.....|.-|..+|+..+...+-+.+-
T Consensus 337 t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtil 392 (412)
T PF01770_consen 337 TGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTIL 392 (412)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHhe
Confidence 55555544444 44444444444444555566666788888888776665554443
No 151
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.46 E-value=4.8e-12 Score=118.01 Aligned_cols=176 Identities=11% Similarity=0.137 Sum_probs=125.7
Q ss_pred chhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHH-HHhcCCchhHHHHHHH
Q 016374 199 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT-LVSKGLSVTTVRKIMQ 277 (390)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~ 277 (390)
+.++..+...+...++++....+++.|+++.+|.+..++......+.....+..+++|+++|| +||||....+.
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~----- 88 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGA----- 88 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHH-----
Confidence 456777778888889999999999999999999999999888888887888888899999999 99996543322
Q ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchhccccCCC--cchhHHHHHHHHHHHHHHHHHHHHHHH
Q 016374 278 SIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPR--YSGVLLGLSNTAGVLAGVFGTAATGYI 355 (390)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~ig~~i~g~l 355 (390)
.....+...................+.+.+.+...+.......+..|++ +|+.+.+......++|..+||.+.|++
T Consensus 89 --~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l 166 (489)
T PRK10207 89 --IVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVI 166 (489)
T ss_pred --HHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 1111221111222211222223444455555555544444555556555 457889999999999999999999999
Q ss_pred HhcCCchhHHHHHHHHHHHHHHHHHH
Q 016374 356 LQHGSWDDVFKVSVGLYLVGTAVWNL 381 (390)
Q Consensus 356 ~~~~g~~~~~~~~~~~~~~~~~~~~~ 381 (390)
.++.||++.|++.++..+++.+.+..
T Consensus 167 ~~~~gw~~~F~i~~i~~~~~~~~~~~ 192 (489)
T PRK10207 167 ADKFGYSVTYNLCGAGLIIALLVYFA 192 (489)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999877666555554443
No 152
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.45 E-value=9.8e-13 Score=123.36 Aligned_cols=159 Identities=13% Similarity=0.098 Sum_probs=124.0
Q ss_pred ccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhh---hhhh------hHHHH
Q 016374 5 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV---AAKL------GLPFL 75 (390)
Q Consensus 5 lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~------~~~~l 75 (390)
.|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+..+..+.+++.++.++ .... +...+
T Consensus 307 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (481)
T TIGR00879 307 SPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAI 386 (481)
T ss_pred HHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHH
Confidence 46667888999988999999999999999999999999999999999988888887776652 1100 12222
Q ss_pred HHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHH
Q 016374 76 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 155 (390)
Q Consensus 76 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 155 (390)
....+..+.......+....++.|.+|+++|++++++.....++|..++|.+.+.+.++.+|++.|++.++++++..+..
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~ 466 (481)
T TIGR00879 387 VFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFV 466 (481)
T ss_pred HHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHH
Confidence 22222222222234466677789999999999999999999999999999999999999999999999988888877766
Q ss_pred HhhccCCC
Q 016374 156 LSKAHSSP 163 (390)
Q Consensus 156 ~~~~~~~~ 163 (390)
....||++
T Consensus 467 ~~~~~~~~ 474 (481)
T TIGR00879 467 YFFLPETK 474 (481)
T ss_pred heecccCC
Confidence 66666543
No 153
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.44 E-value=3e-12 Score=116.81 Aligned_cols=158 Identities=14% Similarity=0.026 Sum_probs=125.9
Q ss_pred ccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhh
Q 016374 5 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGI 84 (390)
Q Consensus 5 lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 84 (390)
+|++.+|+|.+..+.+...+.+.++..++.+..|++.||+|||+.+..+..+..++..+....+. +...+. -.+.|+
T Consensus 228 lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~--~~l~g~ 304 (393)
T PRK09705 228 LPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPL-QLPVLW--AMVCGL 304 (393)
T ss_pred HHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccc-hHHHHH--HHHHHH
Confidence 46666778999999999999999999999999999999999999998888887777665543331 222222 245688
Q ss_pred ccccchhhhhHHhhhccc-CCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcC-ChHHHHHHHHHHHHHHHHHHhhccCC
Q 016374 85 GEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVWLSKAHSS 162 (390)
Q Consensus 85 ~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (390)
+.+...+.......+..+ +++|++.++..+....++..++|.+.+++.|+.| |+..|.+.....++.........||+
T Consensus 305 g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 305 GLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred hccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 888778877777777775 5789999999999999999999999999999876 78888887777777766666676765
Q ss_pred CCC
Q 016374 163 PAE 165 (390)
Q Consensus 163 ~~~ 165 (390)
+++
T Consensus 385 ~~~ 387 (393)
T PRK09705 385 FPQ 387 (393)
T ss_pred ccc
Confidence 543
No 154
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.44 E-value=2.2e-12 Score=115.92 Aligned_cols=167 Identities=16% Similarity=0.281 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH
Q 016374 205 IVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGP 284 (390)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 284 (390)
.+..++............|.++.+++|.++.+.+++.+...++..++++..|++.||+|||+.... .......
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~-------~~~~~~~ 74 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLII-------GLLLFAL 74 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHH-------HHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEee-------hhhhhhh
Confidence 345566667777777888866666689999999999999999999999999999999999953222 1111111
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhH
Q 016374 285 AFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDV 364 (390)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~ 364 (390)
........ .+.+.......+.+.+.+...........+..++|+|+++.++.+....+|..++|.+.+.+.+..+|+..
T Consensus 75 ~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~ 153 (352)
T PF07690_consen 75 GSLLLAFA-SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWA 153 (352)
T ss_dssp HHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCH
T ss_pred HHHHhhhh-hhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccc
Confidence 11111111 33344445555556665555555555555666667999999999999999999999999999988999999
Q ss_pred HHHHHHHHHHHHHHH
Q 016374 365 FKVSVGLYLVGTAVW 379 (390)
Q Consensus 365 ~~~~~~~~~~~~~~~ 379 (390)
+++.++..++..++.
T Consensus 154 ~~~~~~~~~~~~il~ 168 (352)
T PF07690_consen 154 FLISAILSLIAAILF 168 (352)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred cccccchhhhhhhhH
Confidence 999999998887753
No 155
>PRK10504 putative transporter; Provisional
Probab=99.43 E-value=4.8e-12 Score=118.57 Aligned_cols=175 Identities=16% Similarity=0.235 Sum_probs=126.7
Q ss_pred chhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHH
Q 016374 199 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 278 (390)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 278 (390)
+.++...+..++.......+..+.|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.... .
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~-------~ 81 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFT-------A 81 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH-------H
Confidence 356777777888888888888999999987 79999999999888889999999999999999999954322 1
Q ss_pred HHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016374 279 IGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 358 (390)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~ 358 (390)
............. ..+.......-.+.+.+.+...+.......+..++++|+++.|..+....+|..++|.+.|.+.++
T Consensus 82 ~~~~~~~~~~~~~-~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~ 160 (471)
T PRK10504 82 IVLFTLGSLFCAL-SGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY 160 (471)
T ss_pred HHHHHHHHHHHHH-hCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh
Confidence 1111111111111 222333344445555555554444333444555668899999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHh
Q 016374 359 GSWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 359 ~g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
.||++.|.+...+..+..+.....
T Consensus 161 ~gw~~~f~~~~~~~~l~~~~~~~~ 184 (471)
T PRK10504 161 ASWHWIFLINIPVGIIGAIATLML 184 (471)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999998887777666655544
No 156
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.43 E-value=2.2e-12 Score=121.11 Aligned_cols=159 Identities=14% Similarity=0.063 Sum_probs=121.0
Q ss_pred cccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhH--HHHHHHHHHHh
Q 016374 6 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL--PFLLVVRVFMG 83 (390)
Q Consensus 6 p~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G 83 (390)
|.+.++.|.+..+..+......+...++.++.|+++||+|||+.++.+..+.+++.++.+.....+. .....+-++.+
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 374 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYV 374 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 6677888888887888888888899999999999999999999999999999888877654421011 12223334444
Q ss_pred hcccc-chhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHH------hhhcCChHHHHHHHHHHHHHHHHHH
Q 016374 84 IGEGV-AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL------IHRFGWPSVFYSFGSLGTVWFTVWL 156 (390)
Q Consensus 84 ~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l------~~~~gw~~~f~~~~~~~~~~~~~~~ 156 (390)
.+.+. ..+....++.|.+|+++|++++++......+|..+++.+.+.+ .+..+|++.|++.++++++..++.+
T Consensus 375 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (479)
T PRK10077 375 AAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMW 454 (479)
T ss_pred HHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHH
Confidence 44332 3467789999999999999999999999999999886665544 4578999999998888777776666
Q ss_pred hhccCCCC
Q 016374 157 SKAHSSPA 164 (390)
Q Consensus 157 ~~~~~~~~ 164 (390)
.+.||+++
T Consensus 455 ~~~~e~~~ 462 (479)
T PRK10077 455 KFVPETKG 462 (479)
T ss_pred hccccCCC
Confidence 66666543
No 157
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.43 E-value=5.8e-12 Score=114.78 Aligned_cols=170 Identities=17% Similarity=0.063 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Q 016374 203 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL 282 (390)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 282 (390)
....................|.+.++ +|.++.+.++..+...++..+++++.|++.||+|||+.... +..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~---------~~~ 78 (385)
T TIGR00710 9 LLGCLSILGPLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLL---------GLF 78 (385)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHH---------HHH
Confidence 33344444555666666777777666 79999999999999999999999999999999999853222 222
Q ss_pred HHHHHHHHHhcCCchHH-HHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 016374 283 GPAFFLTQLSHVDSPAM-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 361 (390)
Q Consensus 283 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~ 361 (390)
............++.+. .....+.+.+.+...........+..++|+|+++.+..+....+|..++|.+.+.+.++.+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 158 (385)
T TIGR00710 79 IFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSW 158 (385)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 22222212222233333 33344445544444443434444555668899999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHh
Q 016374 362 DDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~ 382 (390)
+..+++.++..++..+...+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~ 179 (385)
T TIGR00710 159 HAIFAFLSLAGILLSALIFFI 179 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999998887777766655544
No 158
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.42 E-value=3.5e-11 Score=112.75 Aligned_cols=152 Identities=14% Similarity=0.150 Sum_probs=119.2
Q ss_pred cccccccCcCcchHHHHHH-HHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHh---hhhhhhhHHHHHHHHHH
Q 016374 6 LPMSAEFNWNPATVGLIQS-SFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT---PVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 6 p~i~~~~~~s~~~~g~~~s-~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~~~l~~~r~l 81 (390)
|.+.+++|.|+++.++... ...++..++.++.|+++||+|+|+.+..+..+.+++.+.. +... .+.+.+...-++
T Consensus 247 ~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~-~~~~~l~~~~~l 325 (491)
T PRK11010 247 TFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITD-KNLYSMGAAVFF 325 (491)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHHH
Confidence 3345678999999999974 6678999999999999999999998777666555544332 2322 145555555666
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhh
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 158 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 158 (390)
+.+..+...+...++..+..+++.++...++.+...++|..+++++.|.+.|..||+..|.+.++++++..+.....
T Consensus 326 ~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 326 ENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 66555656677788899999999999999999999999999999999999999999999999888888876655544
No 159
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.42 E-value=6.8e-12 Score=112.91 Aligned_cols=162 Identities=11% Similarity=0.001 Sum_probs=114.0
Q ss_pred HHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHH
Q 016374 212 NWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL 291 (390)
Q Consensus 212 ~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (390)
+.....+...+|.+.+| +|.|+.+.+++.+...++..++++..|++.||+|||+.. . .............
T Consensus 4 ~~~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~-------~--~~~~~~~~~~~~~ 73 (368)
T TIGR00903 4 QAIWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFL-------F--GSLATFAAAAGRL 73 (368)
T ss_pred hHHHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHH-------H--HHHHHHHHHHHHH
Confidence 34555666777777776 799999999999999999999999999999999987321 1 1111111111111
Q ss_pred hc-CCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHH
Q 016374 292 SH-VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVG 370 (390)
Q Consensus 292 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~ 370 (390)
.. .+.......-++.+.+.+. ..+......+..|+|+|+++.++.+....+|..+++.+.+.+.++.||+..|.+.++
T Consensus 74 ~~~~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~ 152 (368)
T TIGR00903 74 LDPFNYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAA 152 (368)
T ss_pred HHhccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 11 2233334444455555543 333444456677789999999999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHhhc
Q 016374 371 LYLVGTAVWNLFST 384 (390)
Q Consensus 371 ~~~~~~~~~~~~~~ 384 (390)
+.++..++.++..+
T Consensus 153 l~~~~~~~~~~~lp 166 (368)
T TIGR00903 153 VAAAGIILVLAALP 166 (368)
T ss_pred HHHHHHHHHHHHcC
Confidence 77766655554433
No 160
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.42 E-value=1.7e-11 Score=114.60 Aligned_cols=162 Identities=16% Similarity=0.068 Sum_probs=103.9
Q ss_pred HHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHH
Q 016374 210 CHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT 289 (390)
Q Consensus 210 ~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (390)
+............|.+.+ .+|.+..+.+...+...++..+++++.|+++||+|+|+... .+.+.......
T Consensus 47 ~~~~~~~~~~~~~~~l~~-~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~---------~~~~~~~~~~~ 116 (476)
T PLN00028 47 TCFVSTFAAAPLLPIIRD-NLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSA---------FLLMLTAPAVF 116 (476)
T ss_pred HHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH---------HHHHHHHHHHH
Confidence 333334444445555544 48999999999888888999999999999999999994322 22222222222
Q ss_pred HHhcCCchHHH-HHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh----c-----C
Q 016374 290 QLSHVDSPAMA-VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ----H-----G 359 (390)
Q Consensus 290 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~----~-----~ 359 (390)
.....++.... +..++.+.+.+.. .+......+..++++|+.+.|+.+...++|..+++.+.+.+.+ . .
T Consensus 117 ~~~~~~s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 195 (476)
T PLN00028 117 CMSLVSSATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFT 195 (476)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchh
Confidence 22222333333 3334445544432 2233334455566899999999998888888888777765532 2 4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHh
Q 016374 360 SWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 360 g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
||+..|++.+++.++..+..+++
T Consensus 196 gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 196 AWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999888877766555544
No 161
>PRK03699 putative transporter; Provisional
Probab=99.42 E-value=1.8e-12 Score=118.40 Aligned_cols=150 Identities=11% Similarity=0.131 Sum_probs=125.1
Q ss_pred ccccc-cccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHh
Q 016374 5 ILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMG 83 (390)
Q Consensus 5 lp~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 83 (390)
+|.+. +++|.|+.+.+++.+.+.++..++.+..|+++||++||+.+.....+..+...+....+ |.+.+.+..++.|
T Consensus 228 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~G 305 (394)
T PRK03699 228 VPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTD--DPSHLLYAILGLG 305 (394)
T ss_pred HHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcC--CchHHHHHHHHHH
Confidence 45544 67899999999999999999999999999999999999998888777777766666666 6767777788889
Q ss_pred hccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHh
Q 016374 84 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 157 (390)
Q Consensus 84 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 157 (390)
++.+...+...++..|..| +++++..+.......+|..++|.+.+++.+..||+..+++.+++.++.......
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (394)
T PRK03699 306 FFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCIL 378 (394)
T ss_pred HHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHH
Confidence 8877777877777888774 556788899999999999999999999999999999999888777776544333
No 162
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.42 E-value=4e-12 Score=114.86 Aligned_cols=172 Identities=13% Similarity=-0.008 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Q 016374 203 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL 282 (390)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 282 (390)
.+....++...........+|.|..+ .+.++.+.+.+.+...++..++.+..|+++||+|||+....+ ....
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~-------~~~~ 74 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGA-------DLIR 74 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHH-------HHHH
Confidence 34566677777777888888998888 689999999999999999999999999999999999543321 1111
Q ss_pred HHHHH-HHHHh--cCCchH-HHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016374 283 GPAFF-LTQLS--HVDSPA-MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 358 (390)
Q Consensus 283 ~~~~~-~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~ 358 (390)
..... ..... ...+.+ ......+.+.+.+...+.......+..++++|+++.|..+....+|..++|.+.+.+.+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 154 (365)
T TIGR00900 75 AVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT 154 (365)
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 11111 111333 334444445544444333334444555568999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHh
Q 016374 359 GSWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 359 ~g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
.||+..+++.++..+++.+.....
T Consensus 155 ~g~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 155 LGIKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999988887777665554443
No 163
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.41 E-value=1e-11 Score=112.96 Aligned_cols=173 Identities=13% Similarity=0.081 Sum_probs=123.7
Q ss_pred chhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHH
Q 016374 199 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 278 (390)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 278 (390)
+.++......+............+|.+.+| +|.+..+.++..+...++..++++..|++.||+|||+...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~--------- 72 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILL--------- 72 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHH---------
Confidence 456667777777888888888888887766 7999999999999999999999999999999999985322
Q ss_pred HHHHHHHHHHHHHhcCCchH-HHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016374 279 IGFLGPAFFLTQLSHVDSPA-MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 357 (390)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~ 357 (390)
.+....+.........++.+ ..+.-.+.+.+.+...........+..++++|+++.+.......++..++|.+.+.+.+
T Consensus 73 ~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 152 (382)
T PRK10091 73 FLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ 152 (382)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh
Confidence 22222222222222333333 33444445554444333333333344455789999999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHH
Q 016374 358 HGSWDDVFKVSVGLYLVGTAVWNL 381 (390)
Q Consensus 358 ~~g~~~~~~~~~~~~~~~~~~~~~ 381 (390)
..+|+..|++.+...++..+....
T Consensus 153 ~~gwr~~f~~~~~~~~~~~~~~~~ 176 (382)
T PRK10091 153 EFSWRYTFLLIAVFNIAVLASIYF 176 (382)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988877666554443
No 164
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.40 E-value=1.4e-11 Score=115.91 Aligned_cols=172 Identities=17% Similarity=0.111 Sum_probs=124.2
Q ss_pred hHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 016374 201 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG 280 (390)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 280 (390)
+..+++..+....-...+..-.|.+.++ +|.++.+.++..+.+.++.....+..|+++||+|||+.... +
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~---------~ 77 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLML---------G 77 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH---------H
Confidence 4455666666777777788889998877 79999999999999999999999999999999999954322 2
Q ss_pred HHHHHHHHHHHhcCCchHHH-HHHHHHHhhhccccccccchhcccc-CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016374 281 FLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 358 (390)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~ 358 (390)
..............++.+.. ..-.+.+.+.+...+.......++. ++++|+++.|+......+|..+||.+.|.+.++
T Consensus 78 ~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~ 157 (495)
T PRK14995 78 GTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH 157 (495)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 22222221122223344433 3335556665554443444444555 458999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHh
Q 016374 359 GSWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 359 ~g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
.||++.|++...+.++..++..+.
T Consensus 158 ~gwr~~f~i~~~~~~~~~~l~~~~ 181 (495)
T PRK14995 158 FYWGSVFLINVPIVLVVMGLTARY 181 (495)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999887777766655544
No 165
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.39 E-value=2.2e-11 Score=111.12 Aligned_cols=156 Identities=10% Similarity=0.026 Sum_probs=110.6
Q ss_pred HHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhc
Q 016374 214 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH 293 (390)
Q Consensus 214 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (390)
..+.....+|.+.++ +|.++.+.+...+...++..+++++.|++.||+|||+.... +.............
T Consensus 35 ~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~---------~~~~~~~~~~~~~~ 104 (394)
T PRK10213 35 VEFLPVSLLTPMAQD-LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVIL---------FAVLLTLSCLLVSF 104 (394)
T ss_pred HHHHHHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHH---------HHHHHHHHHHHHHH
Confidence 334445567777666 79999999999999999999999999999999999954322 11111211111122
Q ss_pred CCch-HHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 016374 294 VDSP-AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLY 372 (390)
Q Consensus 294 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~ 372 (390)
.++. .....-.+.+.+.+...+.......+..++|+|+++.++.....++|..++|.+.+.+.+..||+..|++.+++.
T Consensus 105 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~ 184 (394)
T PRK10213 105 ANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMG 184 (394)
T ss_pred HChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 2333 334444555666555444444444555666899999999999999999999999999999999999999887766
Q ss_pred HHHHHHH
Q 016374 373 LVGTAVW 379 (390)
Q Consensus 373 ~~~~~~~ 379 (390)
++..+..
T Consensus 185 ~~~~l~~ 191 (394)
T PRK10213 185 VLCIFWI 191 (394)
T ss_pred HHHHHHH
Confidence 6554443
No 166
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.39 E-value=2.2e-11 Score=110.21 Aligned_cols=166 Identities=16% Similarity=0.099 Sum_probs=111.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 016374 200 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI 279 (390)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 279 (390)
.++...+..+...........+.|.++++++|.|+.+.++..+...++..++.++.|++.||+|||+....+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~-------- 73 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLS-------- 73 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHH--------
Confidence 456667777777778888888999878788999999999999999999999999999999999999543321
Q ss_pred HHHHHHHHHHHHhcCC-chHH-HHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016374 280 GFLGPAFFLTQLSHVD-SPAM-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 357 (390)
Q Consensus 280 ~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~ 357 (390)
..............+ +.+. .+...+.+.+.+ ...+......+..++|+|+++.++.....++|..+++.+.+.+.+
T Consensus 74 -~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 74 -LLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred -HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 111111111111122 3333 333344454433 333333444455566899999999998888888888888877665
Q ss_pred c----------CCchhHH-HHHHHHHHHH
Q 016374 358 H----------GSWDDVF-KVSVGLYLVG 375 (390)
Q Consensus 358 ~----------~g~~~~~-~~~~~~~~~~ 375 (390)
. .+|++.+ ...+....+.
T Consensus 152 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 180 (366)
T TIGR00886 152 SLIFGAGLPAHLAWGWAFVIVPAGILLLP 180 (366)
T ss_pred HHHhcccccccccccchhHHHHHHHHHHH
Confidence 2 3788888 4334443333
No 167
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.39 E-value=2.2e-11 Score=107.26 Aligned_cols=176 Identities=18% Similarity=0.130 Sum_probs=137.4
Q ss_pred chhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHH
Q 016374 199 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 278 (390)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 278 (390)
...+.+.+..|.....++.....+|+..+| +|.|..++|...+.+..+..++.++...+.||+.||+.+.. .
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~-------~ 84 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLG-------L 84 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHH-------H
Confidence 356677888888899999999999999999 79999999999999999999999999999999999953222 1
Q ss_pred HHHHHHHHHHHHHhcCCchHHHHH-HHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016374 279 IGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 357 (390)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~ 357 (390)
... ....-......++...... =.+.+...+.+.........+.+||++|+++.++..+...++..+|.+++.++-|
T Consensus 85 l~l--Fi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~ 162 (394)
T COG2814 85 LAL--FIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQ 162 (394)
T ss_pred HHH--HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 111 1111111122344444333 3444555555555555566677888999999999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHhhc
Q 016374 358 HGSWDDVFKVSVGLYLVGTAVWNLFST 384 (390)
Q Consensus 358 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ 384 (390)
..|||..|++.+.+.++..+..+...+
T Consensus 163 ~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 163 LFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999998887776655
No 168
>PRK11043 putative transporter; Provisional
Probab=99.36 E-value=3.8e-11 Score=110.10 Aligned_cols=168 Identities=12% Similarity=0.084 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHhhchHHH--HhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH
Q 016374 207 SHFCHNWGTFILLTWMPTY--YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGP 284 (390)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~--l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 284 (390)
........+.....+.|.+ +++.+|.++.+.+...+...++..++.++.|+++||++||+.... .......
T Consensus 11 ~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~-------~~~~~~~ 83 (401)
T PRK11043 11 LAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLA-------GLSLFAL 83 (401)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHH-------HHHHHHH
Confidence 3333344444444555544 445589999999999999999999999999999999999954322 1111111
Q ss_pred HHHHHHHhcCCch-HHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchh
Q 016374 285 AFFLTQLSHVDSP-AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDD 363 (390)
Q Consensus 285 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~ 363 (390)
... .....++. .......+.+.+.+...........+..++++++...+..+....++..++|.+.+.+.++.||+.
T Consensus 84 ~~~--~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~ 161 (401)
T PRK11043 84 GSL--GMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQA 161 (401)
T ss_pred HHH--HHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHH
Confidence 111 11122333 333333444444333332222334455566778888899888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 016374 364 VFKVSVGLYLVGTAVWNLFS 383 (390)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~ 383 (390)
.+++.+.+.++..+......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~ 181 (401)
T PRK11043 162 IFATLFAITLLLILPTLRLK 181 (401)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 99988877777666554443
No 169
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.36 E-value=3.1e-11 Score=110.60 Aligned_cols=173 Identities=12% Similarity=0.052 Sum_probs=115.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHH
Q 016374 198 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ 277 (390)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 277 (390)
.+++....+..++..........+.+.++++ +|.++.+.+...+...++..+++++.|++.||++||+....
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~------- 83 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMI------- 83 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHH-------
Confidence 3456667777777777777777888999877 79999999999999999999999999999999999954332
Q ss_pred HHHHHHHHHHHH-HHhc-CCchHH-HHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHH-HHHHHHHH
Q 016374 278 SIGFLGPAFFLT-QLSH-VDSPAM-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAG-VFGTAATG 353 (390)
Q Consensus 278 ~~~~~~~~~~~~-~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~-~ig~~i~g 353 (390)
+........... .... .++.+. .....+.+.+.............+..++|+|++++|+.++...+|. .++|.+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~ 163 (402)
T TIGR00897 84 GLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSS 163 (402)
T ss_pred HHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111111 1112 123332 3333334444433333333344556678999999999999999996 58999999
Q ss_pred HHHhcCCchhHHHHHHHHHHHHHHH
Q 016374 354 YILQHGSWDDVFKVSVGLYLVGTAV 378 (390)
Q Consensus 354 ~l~~~~g~~~~~~~~~~~~~~~~~~ 378 (390)
.+.+..|++..++.......+..++
T Consensus 164 ~l~~~~g~~~~~~~~~~~~~~~~~~ 188 (402)
T TIGR00897 164 YAIPAFGEMNTLWSALAFVLTGGVI 188 (402)
T ss_pred hcccccchHHHHHHHHHHHHHHHHH
Confidence 9998888766655544443333333
No 170
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.36 E-value=1.7e-11 Score=114.30 Aligned_cols=151 Identities=15% Similarity=0.174 Sum_probs=135.8
Q ss_pred cccccc-cccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Q 016374 4 AILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFM 82 (390)
Q Consensus 4 ~lp~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 82 (390)
.+|.+. +++|.++...|++.+...+|..++.+..+++.+|+++++.+..+.+..+++.+..++++ +.+..++.-++.
T Consensus 240 LlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~--~~~~~~~~l~l~ 317 (524)
T PF05977_consen 240 LLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP--SFWLALIALFLA 317 (524)
T ss_pred hhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch--HHHHHHHHHHHH
Confidence 356654 56899999999999999999999999999999999999999999999999999999999 899999999999
Q ss_pred hhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHH
Q 016374 83 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 156 (390)
Q Consensus 83 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 156 (390)
|++.........+.+.+..|++.|||.++++......+..+|..+.|.+.+.+|.+..+.+.++..++..++..
T Consensus 318 G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 318 GAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888999999999999999999999999999999999999999999999999887766555544443
No 171
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.36 E-value=1.7e-11 Score=115.30 Aligned_cols=171 Identities=16% Similarity=0.206 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Q 016374 202 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGF 281 (390)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 281 (390)
....+..+.............|.+.++ +|.++.+.++..+...++..++.++.|++.||+|||+... .+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~---------~~~ 74 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFL---------IST 74 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHH---------HHH
Confidence 344455566666667777778888777 7999999999999999999999999999999999994322 222
Q ss_pred HHHHHHHHHHhcCCchH-HHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 016374 282 LGPAFFLTQLSHVDSPA-MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 360 (390)
Q Consensus 282 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g 360 (390)
.............++.. ....-.+.+.+.+...........+..++++|+++.++......+|..++|.+.+++.++.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 154 (485)
T TIGR00711 75 FAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH 154 (485)
T ss_pred HHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC
Confidence 22222222222333333 33444444555554444444445555666899999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHh
Q 016374 361 WDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
|++.|++.+...++..++..+.
T Consensus 155 w~~~f~~~~~~~~~~~~~~~~~ 176 (485)
T TIGR00711 155 WRWIFLINVPIGIIVVVVAFFI 176 (485)
T ss_pred ceehhhhhhHHHHHHHHHHHHH
Confidence 9999998887776666555444
No 172
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.36 E-value=3.1e-11 Score=110.84 Aligned_cols=171 Identities=12% Similarity=0.008 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Q 016374 202 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGF 281 (390)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 281 (390)
....+.+++.+.-........| .+++++|.+..+.++..+...++..++++..|++.||+|||+... .+.
T Consensus 11 ~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~---------~~~ 80 (412)
T TIGR02332 11 IFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIA---------GIM 80 (412)
T ss_pred HHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHH---------HHH
Confidence 3344444444444555555566 566668999999999999999999999999999999999995322 222
Q ss_pred HHHHHHHHHHhcCCch-HHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh---
Q 016374 282 LGPAFFLTQLSHVDSP-AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ--- 357 (390)
Q Consensus 282 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~--- 357 (390)
.............++. .....-.+.|.+.+...+.......+..++++|+++.|+.+....+|..+++.+.+++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 160 (412)
T TIGR02332 81 VLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDG 160 (412)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2222222222222333 344444555666665443333334444556789999999999999999999999998875
Q ss_pred ---cCCchhHHHHHHHHHHHHHHHHHHh
Q 016374 358 ---HGSWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 358 ---~~g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
..||+..|++.++..++..++.+++
T Consensus 161 ~~~~~gwr~~f~~~~~~~l~~~~~~~~~ 188 (412)
T TIGR02332 161 LMALKGWQWLFLLEGFPSVILGVMTWFW 188 (412)
T ss_pred CCCccchhHHHHHHHHHHHHHHHHHhhc
Confidence 3689999999877776655554444
No 173
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.35 E-value=2.4e-11 Score=110.66 Aligned_cols=179 Identities=12% Similarity=0.050 Sum_probs=111.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHH
Q 016374 198 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ 277 (390)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 277 (390)
+|+++...+.........+.+....+.+-++.+|+|+.|.+++.+...+...+.++..|++.||+|.|+....
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~------- 105 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVF------- 105 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH-------
Confidence 3566666666666665666666666666665699999999999999999999999999999999999953322
Q ss_pred HHHHHHHHHHHHHHh---c-CCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 016374 278 SIGFLGPAFFLTQLS---H-VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATG 353 (390)
Q Consensus 278 ~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g 353 (390)
............... . .+.....+...+.+.+ +....+....+..-.++|+||++.|+.....++|..+++.+.+
T Consensus 106 ~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p 184 (462)
T PRK15034 106 STAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAP 184 (462)
T ss_pred HHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHH
Confidence 221211111111111 1 2333344445555554 3333344444444456688999999997777777777666665
Q ss_pred HHH-----hc-------------CCchhHHHHHHHHHHHHHHHHHHhhc
Q 016374 354 YIL-----QH-------------GSWDDVFKVSVGLYLVGTAVWNLFST 384 (390)
Q Consensus 354 ~l~-----~~-------------~g~~~~~~~~~~~~~~~~~~~~~~~~ 384 (390)
.+. +. .+++.+.++.....++..++.++..+
T Consensus 185 ~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~ 233 (462)
T PRK15034 185 LVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMN 233 (462)
T ss_pred HHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 433 21 23566666666666666666555533
No 174
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.35 E-value=2.1e-11 Score=111.56 Aligned_cols=178 Identities=15% Similarity=0.127 Sum_probs=117.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHH
Q 016374 198 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ 277 (390)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 277 (390)
||.+|......++.+.+...+..++|.|+++++|.++.+.+...+...++..++++..|+++||+|||+...... .
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~----~ 76 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWII----S 76 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH----H
Confidence 578888989999999999999999999999989999999999999999999999999999999999996443211 0
Q ss_pred HHHHHHHHHHHHHHhc--C-CchHH-HHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 016374 278 SIGFLGPAFFLTQLSH--V-DSPAM-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATG 353 (390)
Q Consensus 278 ~~~~~~~~~~~~~~~~--~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g 353 (390)
................ . +.... .......+.+.... .+.......+.. ++++...|.......+|..++|.+.|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~g 154 (396)
T TIGR00882 77 GLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAG-AGAIEAYIEKVS-RNSNFEYGKARMFGCVGWALCASIAG 154 (396)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc-hhhHHHHHHHhh-hhcccccchhhhhcccHHHHHHHHHh
Confidence 1111011011111100 0 01111 11122233333322 222233333322 33455677888888999999999999
Q ss_pred HHHhcCCchhHHHHHHHHHHHHHHHHHHh
Q 016374 354 YILQHGSWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 354 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
.+.+. +|+..|++.+.+.++..++.+..
T Consensus 155 ~l~~~-~~~~~f~~~~~~~~~~~~~~~~~ 182 (396)
T TIGR00882 155 ILFSI-DPQIVFWLGSGFALILMLLLMFA 182 (396)
T ss_pred hhhcc-CchHHHHHHHHHHHHHHHHHHHh
Confidence 88764 89999988887777766554443
No 175
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.35 E-value=5.3e-11 Score=108.78 Aligned_cols=171 Identities=13% Similarity=0.063 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Q 016374 202 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGF 281 (390)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 281 (390)
....+..+....+.......+|.+.++ +|.++.+.+...+...++..++.++.|+++||+|||+.... +.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~---------~~ 75 (392)
T PRK10473 6 LCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIP---------GA 75 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHH---------HH
Confidence 334444555555666666778887777 79999999999999999999999999999999999853322 22
Q ss_pred HHHHHHHHHHhcCCchH-HHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 016374 282 LGPAFFLTQLSHVDSPA-MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 360 (390)
Q Consensus 282 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g 360 (390)
.............++.. ......+.+.+.+...........+..++++|+++.+..+....++..++|.+.+.+.+..+
T Consensus 76 ~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g 155 (392)
T PRK10473 76 ALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP 155 (392)
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 22222222222223333 33333444444443333333444455667899999999999999999999999999888889
Q ss_pred chhHHHHHHHHHHHHHHHHHHh
Q 016374 361 WDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
|+..+++.+.+.++..+.....
T Consensus 156 ~~~~~~~~~~~~~i~~~~~~~~ 177 (392)
T PRK10473 156 WQSLFYTMAAMGILVLLLSLFI 177 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998887777666554443
No 176
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.34 E-value=1.1e-11 Score=115.23 Aligned_cols=155 Identities=12% Similarity=0.059 Sum_probs=108.0
Q ss_pred ccccc-cccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhh--hhHHHH-HHHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Q 016374 5 ILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV--GGKAVL-GFGVVWWSIATALTPVAAKLGLPFLLVVRV 80 (390)
Q Consensus 5 lp~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~l-~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 80 (390)
+|.+. ++.|.+..+.++..+.+.++..++.++.|+++||+ |||+.. .....+..++.+...+.+..+.+...+..+
T Consensus 276 ~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 355 (452)
T PRK11273 276 SPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMI 355 (452)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHH
Confidence 45544 45789999999999999999999999999999999 555432 222333333333322222114444445555
Q ss_pred HHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhH-hHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhc
Q 016374 81 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSV-TGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 159 (390)
Q Consensus 81 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 159 (390)
..|.+..........+..|.+|+++||+++|+.+....+|.. .+|.+.+.+.|+.||+..|++.++.+++.++....+.
T Consensus 356 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 356 VIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM 435 (452)
T ss_pred HHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 555543322333345678999999999999999988888765 4899999999999999999988887777665555443
No 177
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.34 E-value=2.3e-11 Score=110.67 Aligned_cols=143 Identities=17% Similarity=0.115 Sum_probs=123.3
Q ss_pred cccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhc
Q 016374 6 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIG 85 (390)
Q Consensus 6 p~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 85 (390)
|...+|.|.++.+.|.+.+...++..+..++.|++.||+|+|+.+..+.+..+++.+..++++ +.+.+++..++.|++
T Consensus 229 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~ 306 (382)
T PRK11128 229 AIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT--ALPWLIVIQILHCGT 306 (382)
T ss_pred HHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHH
Confidence 445577899999999999999999999999999999999999999999999999888888888 889899999999999
Q ss_pred cccchhhhhHHhhhcccCCchhHHHHHHH-HhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHH
Q 016374 86 EGVAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWF 152 (390)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~ 152 (390)
.+...+....++.+. +++++++..+... ....+|..+||.++|.+.|.+|+ ..|+..+++.++.+
T Consensus 307 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 307 FTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 998888888888886 5677789899886 55678889999999999999887 56766666655543
No 178
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.33 E-value=6.4e-12 Score=114.71 Aligned_cols=145 Identities=14% Similarity=0.158 Sum_probs=114.4
Q ss_pred ccccc-cccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHH--HHhhhhhhhhHHHHHHHHHH
Q 016374 5 ILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIAT--ALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 5 lp~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~--~~~~~~~~~~~~~l~~~r~l 81 (390)
.|.+. +++|.++.+.+...+...++..++.++.|+++||+|||+.+.....+..+.. ....+....+.+.+.....+
T Consensus 242 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (394)
T TIGR00883 242 LPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLG 321 (394)
T ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 34444 6789999999999999999999999999999999999998775554444332 22222211156777778889
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHH-HHhhhhhhHhHHhhHHHHhhhcC-ChHHHHHHHHHHH
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALV-YSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGT 149 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~g-w~~~f~~~~~~~~ 149 (390)
.|++.+...+...+++.|.+|+++|+++.++. +....+|..++|.+++.+.++.| |+..++......+
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 322 LALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 99988888899999999999999999999984 56667899999999999999988 8888776654443
No 179
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.33 E-value=1.5e-11 Score=113.63 Aligned_cols=136 Identities=14% Similarity=0.099 Sum_probs=103.2
Q ss_pred ccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhh
Q 016374 5 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGI 84 (390)
Q Consensus 5 lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 84 (390)
+|.+.++.|.++.+.+...+...++..++.++.|++.||+|||+.+..+.++..+........+..+...+....+..+.
T Consensus 254 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (426)
T PRK12307 254 LPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMA 333 (426)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHH
Confidence 46666677889999999999999999999999999999999999998888777666554443331122222222222222
Q ss_pred ccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHH
Q 016374 85 GEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSV 140 (390)
Q Consensus 85 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 140 (390)
+.....+....++.|.+|+++|++++|+......+|..++|.+.+++.++.|+...
T Consensus 334 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~ 389 (426)
T PRK12307 334 TNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAA 389 (426)
T ss_pred hcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHH
Confidence 22233455667889999999999999999999999999999999999998886554
No 180
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.33 E-value=2.3e-11 Score=111.02 Aligned_cols=146 Identities=16% Similarity=0.056 Sum_probs=110.7
Q ss_pred cccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHH--HH------HHHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q 016374 8 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKA--VL------GFGVVWWSIATALTPVAAKLGLPFLLVVR 79 (390)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~--~l------~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 79 (390)
+.+++|.++.+.+++.+...++..++.++.|++.||+|||+ .. ..+..+..+........+ +.+......
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 319 (399)
T TIGR00893 242 LVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVN--IPYAALALV 319 (399)
T ss_pred HHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccch--hHHHHHHHH
Confidence 34668889999999999999999999999999999999996 11 111111122222222223 344444444
Q ss_pred HHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcC-ChHHHHHHHHHHHHHHHHHH
Q 016374 80 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVWL 156 (390)
Q Consensus 80 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~ 156 (390)
.+.+.+.+ ..+...+++.|.+|+++|++++++.+....+|..++|.+.+.+.+..| |+..|.+.++..++..+..+
T Consensus 320 ~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 320 ALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 55555544 788899999999999999999999999999999999999999999988 99999988877776655443
No 181
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.33 E-value=3.6e-11 Score=111.47 Aligned_cols=176 Identities=11% Similarity=0.021 Sum_probs=111.8
Q ss_pred chhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHH
Q 016374 199 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 278 (390)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 278 (390)
+.++...+.....+.....+....| ++++ .|.++.+.++..+...++..++.+..|++.||++||+....+. ....
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~--~~~~ 102 (438)
T TIGR00712 27 QVFLGIFFGYAAYYLVRKNFALAMP-YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGL--ILSA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHhccHHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHH--HHHH
Confidence 3344444444444443444444555 5556 4999999999999999999999999999999999986543321 1111
Q ss_pred HHHHHHHHHHHHHhc-CCchHH-HHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016374 279 IGFLGPAFFLTQLSH-VDSPAM-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL 356 (390)
Q Consensus 279 ~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~ 356 (390)
. .......... .++... .....+.+.+.+...........+..++++|++++|+.+....+++.++|.+.+...
T Consensus 103 ~----~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~ 178 (438)
T TIGR00712 103 A----VMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGM 178 (438)
T ss_pred H----HHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHH
Confidence 1 1111111111 122222 233334454444443434444455566789999999999999999999998887655
Q ss_pred h-cCCchhHHHHHHHHHHHHHHHHHHh
Q 016374 357 Q-HGSWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 357 ~-~~g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
+ ..+|+..|++.+++.++..+..++.
T Consensus 179 ~~~~~w~~~f~~~~~~~~i~~~~~~~~ 205 (438)
T TIGR00712 179 AWFNDWHAALYFPAICAIIVALFAFAM 205 (438)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 4 5789999999888877765554443
No 182
>TIGR00895 2A0115 benzoate transport.
Probab=99.32 E-value=4e-11 Score=109.68 Aligned_cols=165 Identities=15% Similarity=0.126 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH
Q 016374 207 SHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAF 286 (390)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (390)
..+.............|.+.++ +|.++.+.+.+.+...++..++.++.|++.||++||+.... +......
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~---------~~~~~~~ 94 (398)
T TIGR00895 25 IMLMDGYDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLW---------SILLFSV 94 (398)
T ss_pred HHHHHHHHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHH---------HHHHHHH
Confidence 3333444445555666766665 79999999999999999999999999999999999843222 1111111
Q ss_pred HHHHHhcCCch-HHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHH
Q 016374 287 FLTQLSHVDSP-AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVF 365 (390)
Q Consensus 287 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~ 365 (390)
........++. .......+.+.+.+...........+..++++|+++.++.+....+|..++|.+.+.+.+..+|+..+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~ 174 (398)
T TIGR00895 95 FTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLF 174 (398)
T ss_pred HHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeeh
Confidence 11112222333 33344444555555444444444444455588999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHH
Q 016374 366 KVSVGLYLVGTAVWNL 381 (390)
Q Consensus 366 ~~~~~~~~~~~~~~~~ 381 (390)
++.++...+..++...
T Consensus 175 ~~~~~~~~~~~~~~~~ 190 (398)
T TIGR00895 175 YVGGIAPLLLLLLLMR 190 (398)
T ss_pred hhhhhHHHHHHHHHHH
Confidence 8886555554444333
No 183
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.32 E-value=7.7e-11 Score=108.10 Aligned_cols=167 Identities=10% Similarity=0.041 Sum_probs=116.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 016374 201 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG 280 (390)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 280 (390)
+....+..+...+.........|.+.++ +|.++.+.++..+...++..++.++.|++.||+|||+.... +
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~---------~ 83 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAEVAGE-FGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVT---------S 83 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH---------H
Confidence 4455556666666666666777766555 89999999999999999999999999999999999953222 1
Q ss_pred HHHHHHHHHHHhcCCch-HHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 016374 281 FLGPAFFLTQLSHVDSP-AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG 359 (390)
Q Consensus 281 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~ 359 (390)
..............++. .......+.+.+.+...........+..++++|+++.++.+....+|..+++.+.+.+.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 163 (405)
T TIGR00891 84 IVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVW 163 (405)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11111111112222333 33344445555555554444455556667789999999999999999999999999998876
Q ss_pred C--chhHHHHHHHHHHHHHH
Q 016374 360 S--WDDVFKVSVGLYLVGTA 377 (390)
Q Consensus 360 g--~~~~~~~~~~~~~~~~~ 377 (390)
+ |+..+.+.++..++...
T Consensus 164 ~~~w~~~f~~~~~~~~~~~~ 183 (405)
T TIGR00891 164 GDGWRALFFISILPIIFALW 183 (405)
T ss_pred CccHHHHHHHHHHHHHHHHH
Confidence 5 89888876655555443
No 184
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.31 E-value=3.7e-11 Score=109.57 Aligned_cols=168 Identities=15% Similarity=0.125 Sum_probs=116.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHH
Q 016374 198 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ 277 (390)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 277 (390)
+|+++.+.+..++..+.........+...++ ++.++.+.++..+.+.+...+..++.|++.||++||+...... ...
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~--~~~ 78 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIAN--GIK 78 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHH--HHH
Confidence 4567777788888777766666666666655 7888888999999999999999999999999999997665432 111
Q ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016374 278 SIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 357 (390)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~ 357 (390)
.+....+ ... .+. ...-.+.+.+.+...+.......+.+++|+|++++|+.+.....+..+||.++|.+.+
T Consensus 79 ~~~~~~~-----~~~--~~~--~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~ 149 (393)
T PRK11195 79 LLGCLLM-----LFG--IHP--LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD 149 (393)
T ss_pred HHHHHHH-----HHH--HHH--HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 111 111 2333445555555555445555566667899999999999999999999999999998
Q ss_pred cCCchhHHHHHHHHHHHHHHH
Q 016374 358 HGSWDDVFKVSVGLYLVGTAV 378 (390)
Q Consensus 358 ~~g~~~~~~~~~~~~~~~~~~ 378 (390)
.. +...+.+.+.+.+++.+.
T Consensus 150 ~~-~~~~~~i~~~~~~~~~~~ 169 (393)
T PRK11195 150 PH-AEAALAVCALIYLLAALF 169 (393)
T ss_pred HH-HHHHHHHHHHHHHHHHHH
Confidence 64 666666665555444433
No 185
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.31 E-value=1.2e-10 Score=107.05 Aligned_cols=159 Identities=10% Similarity=-0.000 Sum_probs=107.5
Q ss_pred HHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhc
Q 016374 214 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH 293 (390)
Q Consensus 214 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (390)
....+...+|.+.++ +|.++.+.+...+...++..++.++.|++.||++||+.... . .............
T Consensus 28 ~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~-------~--~~~~~~~~~~~~~ 97 (406)
T PRK15402 28 ANDMIQPGMLAVVED-FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLA-------G--VAFFILTCLAILL 97 (406)
T ss_pred hhhhHhcchHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH-------H--HHHHHHHHHHHHH
Confidence 445555666766655 89999999999999999999999999999999999954322 1 1111111111112
Q ss_pred CCchHH-HHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 016374 294 VDSPAM-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLY 372 (390)
Q Consensus 294 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~ 372 (390)
.++.+. .....+.+.+.+...........+..+++++.+..++......++..++|.+.+.+.++.+|+..+++.+++.
T Consensus 98 ~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~ 177 (406)
T PRK15402 98 AQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALA 177 (406)
T ss_pred HccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHH
Confidence 233333 3333333444433323333333445556788888999888888999999999999999999999999888887
Q ss_pred HHHHHHHHHh
Q 016374 373 LVGTAVWNLF 382 (390)
Q Consensus 373 ~~~~~~~~~~ 382 (390)
+++.+.....
T Consensus 178 ~~~~~~~~~~ 187 (406)
T PRK15402 178 ALSFFGLWRA 187 (406)
T ss_pred HHHHHHHHHh
Confidence 7776654443
No 186
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.30 E-value=7.7e-11 Score=108.72 Aligned_cols=149 Identities=13% Similarity=0.085 Sum_probs=129.7
Q ss_pred cccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhH--HHHHHHHHHHHHHHHHhhh--------hhhhhHHHHHH
Q 016374 8 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK--AVLGFGVVWWSIATALTPV--------AAKLGLPFLLV 77 (390)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~--------~~~~~~~~l~~ 77 (390)
-.+++|++..+...+.-+..+...+|++++|++.||+|.| +++..++..+.+..+...+ .+ +-+.+.+
T Consensus 308 a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~--~~~~f~~ 385 (477)
T PF11700_consen 308 ATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLK--SPWEFWV 385 (477)
T ss_pred HHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcc--cHHHHHH
Confidence 3568999999999999999999999999999999999999 8888888777555554444 44 6788999
Q ss_pred HHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcC-ChHHHHHHHHHHHHHHHHHH
Q 016374 78 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVWL 156 (390)
Q Consensus 78 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~ 156 (390)
.-++.|+..|...+...++.+|..|+++.+..+|++....-....+||.+.+.+.+..| -|..+....++.++.+++..
T Consensus 386 ~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 386 LAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999876 88998887777777765554
Q ss_pred hh
Q 016374 157 SK 158 (390)
Q Consensus 157 ~~ 158 (390)
+.
T Consensus 466 ~v 467 (477)
T PF11700_consen 466 FV 467 (477)
T ss_pred hc
Confidence 43
No 187
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.29 E-value=7.7e-10 Score=99.77 Aligned_cols=326 Identities=13% Similarity=0.050 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhh------hhhhh-------hHHHHHHHHHHHhhcccc
Q 016374 22 IQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP------VAAKL-------GLPFLLVVRVFMGIGEGV 88 (390)
Q Consensus 22 ~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~------~~~~~-------~~~~l~~~r~l~G~~~~~ 88 (390)
..-.-.+...+.++..|.+.||..|.++...+.+.--++..+.. +.... ....+++.-.+.|.-.-.
T Consensus 43 ygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~L 122 (432)
T PF06963_consen 43 YGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERL 122 (432)
T ss_pred HHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHH
Confidence 33345566678889999999999999987776555433322221 11100 011112212222211111
Q ss_pred -chhhhhHHhhhcc------cCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhc--
Q 016374 89 -AMPAMNNILSKWV------PVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA-- 159 (390)
Q Consensus 89 -~~~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~-- 159 (390)
......+.=.||. +++++.+.++...-.--+.-+++|.+.|.+.+..+.+....+.+...++...+-+.+.
T Consensus 123 as~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~ 202 (432)
T PF06963_consen 123 ASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLAR 202 (432)
T ss_pred HHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111122223443 4566778888888888899999999999999988888887777777766655333221
Q ss_pred --cCCCCCCCCCchhhhhhhhh----cccCCCC-----------CCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhch
Q 016374 160 --HSSPAEDPQLRPAEKKLIVS----SCASKEP-----------VKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWM 222 (390)
Q Consensus 160 --~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (390)
+..|+-+.++++++.+...+ +.+++++ ....+|+..+++|.+ ...+...+.++...++...+
T Consensus 203 VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vf-las~alalLY~TVLsf~~lm 281 (432)
T PF06963_consen 203 VYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVF-LASFALALLYFTVLSFGGLM 281 (432)
T ss_pred HHHhChHhcCCCCCccccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHH-HHHHHHHHHHHHHhcCcHHH
Confidence 11121111111110000000 0000000 012235555555544 44445555555566778888
Q ss_pred HHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCC--c--hH
Q 016374 223 PTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD--S--PA 298 (390)
Q Consensus 223 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~ 298 (390)
..|+++. |+++...|..-....+.++.+..+..++.+|+|..|.-.++...... ++..+...+ ..+..+ . ..
T Consensus 282 t~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~--~L~~~v~~~-~~~~~~~~~~s~~ 357 (432)
T PF06963_consen 282 TAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWV--CLALCVVSF-WAPGSPFSSISAY 357 (432)
T ss_pred HHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHH--HHHHHHHHH-hcCCCCchhhHHH
Confidence 9999995 99999999999999999999999999999999987655544322211 111222222 222211 1 11
Q ss_pred HHH-HHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 016374 299 MAV-LCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAAT 352 (390)
Q Consensus 299 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~ 352 (390)
.+. ...+-=.|.-++-........+++|+++||...|.-+..+++...+--...
T Consensus 358 ~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 358 LLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 111 222223344444455666777888889999999999999988776655443
No 188
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.29 E-value=6.7e-11 Score=107.50 Aligned_cols=159 Identities=14% Similarity=0.083 Sum_probs=111.8
Q ss_pred HHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhc
Q 016374 214 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH 293 (390)
Q Consensus 214 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (390)
+.......+|.+.++ +|.++.+.+...+...++..++.++.|++.||+|||+.... +.............
T Consensus 6 ~~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~---------~~~~~~i~~~~~~~ 75 (377)
T PRK11102 6 AIDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILG---------GTLVFALAAVACAL 75 (377)
T ss_pred HHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHH---------HHHHHHHHHHHHHH
Confidence 445566778888887 79999999999999999999999999999999999843222 22221111111112
Q ss_pred CCch-HHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 016374 294 VDSP-AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLY 372 (390)
Q Consensus 294 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~ 372 (390)
.++. .......+.+.+.+...........+..++|+|+++.++.+....+|..++|.+.+.+.+..+|+..+++.+.+.
T Consensus 76 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 155 (377)
T PRK11102 76 AQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAA 155 (377)
T ss_pred HccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 2333 333334444544444333333344455566889999999999999999999999999999999999999888777
Q ss_pred HHHHHHHHHh
Q 016374 373 LVGTAVWNLF 382 (390)
Q Consensus 373 ~~~~~~~~~~ 382 (390)
++..+...+.
T Consensus 156 ~~~~~~~~~~ 165 (377)
T PRK11102 156 ILAAALVFFF 165 (377)
T ss_pred HHHHHHHHHh
Confidence 7765554443
No 189
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.28 E-value=1.7e-10 Score=105.58 Aligned_cols=168 Identities=10% Similarity=-0.016 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Q 016374 203 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL 282 (390)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 282 (390)
.......+..+........+|.+.++ +|.|+.+.+...+...++..++.++.|+++||+|||+....+ ....
T Consensus 12 ~~~~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~-------~~~~ 83 (394)
T PRK11652 12 MLVLLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVG-------MSIF 83 (394)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHH-------HHHH
Confidence 34444444455555556667777766 799999999999999999999999999999999999543321 1111
Q ss_pred HHHHHHHHHhcCCchH-HHHHHHHHHhhhccccccccchhc-cccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 016374 283 GPAFFLTQLSHVDSPA-MAVLCMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 360 (390)
Q Consensus 283 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g 360 (390)
...... ....++.+ ......+.+.+.+... +...... +..++++++.+.+..+....++..++|.+.+.+.+..|
T Consensus 84 ~~~~~~--~~~~~~~~~l~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g 160 (394)
T PRK11652 84 ILGTLV--ALFAHSLTVLIAASAIQGLGTGVGG-VMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG 160 (394)
T ss_pred HHHHHH--HHHHccHHHHHHHHHHHHhhhhHHH-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 111111 11223333 3333334444433222 2222233 33445788999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHH
Q 016374 361 WDDVFKVSVGLYLVGTAVWNL 381 (390)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~ 381 (390)
|+..|++.++..++..+...+
T Consensus 161 ~~~~f~~~~~~~~~~~~~~~~ 181 (394)
T PRK11652 161 WRACYLFLLLLGAGVTFSMAR 181 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 999999887766655444333
No 190
>PRK09952 shikimate transporter; Provisional
Probab=99.28 E-value=1.1e-10 Score=108.13 Aligned_cols=153 Identities=13% Similarity=0.017 Sum_probs=111.9
Q ss_pred cccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhh--hhhhHHHHHHHHHHHhhc
Q 016374 8 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA--AKLGLPFLLVVRVFMGIG 85 (390)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~ 85 (390)
+++++|.++.+...+.........++.++.|+++||+|||+.+..+.++..++....... ...+...+++..++.+++
T Consensus 277 ~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 356 (438)
T PRK09952 277 STQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIA 356 (438)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 356788887766666666677778889999999999999999888876665544333221 111344445566777888
Q ss_pred cccchhhhhHHhhhcccCCchhHHHHHHHH-hhhhhhHhHHhhHHHHhhhc--CChHHHHHHHHHHHHHHHHHHhhccC
Q 016374 86 EGVAMPAMNNILSKWVPVAERSRSLALVYS-GMYLGSVTGLAFSPFLIHRF--GWPSVFYSFGSLGTVWFTVWLSKAHS 161 (390)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~--gw~~~f~~~~~~~~~~~~~~~~~~~~ 161 (390)
.+...+...+++.|.+|++.|+...++... +..+|..++|.+.+++.+.. +|+..+...++..++..+..+ ..+|
T Consensus 357 ~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~-~~~~ 434 (438)
T PRK09952 357 HDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL-LMKD 434 (438)
T ss_pred HHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH-Hccc
Confidence 777788889999999999999988888554 45589999999999998844 488888877777766655544 3344
No 191
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.28 E-value=9.5e-11 Score=106.99 Aligned_cols=149 Identities=17% Similarity=0.135 Sum_probs=114.4
Q ss_pred ccccccccCcCcchHHHHHHHHH-HHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhh----hhhHHHHHHHH
Q 016374 5 ILPMSAEFNWNPATVGLIQSSFF-WGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA----KLGLPFLLVVR 79 (390)
Q Consensus 5 lp~i~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~~~l~~~r 79 (390)
.+...+|.|.+++++|++..... ....++.++.|++.||+|+|+.+..+..+.++......... ..+...+....
T Consensus 231 ~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (390)
T TIGR02718 231 SKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCS 310 (390)
T ss_pred hhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHH
Confidence 34556778999999999988876 46667789999999999999998887766533333222111 00333445556
Q ss_pred HHHhhccccchhhhhHHhhhcccC-CchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHH
Q 016374 80 VFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 153 (390)
Q Consensus 80 ~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~ 153 (390)
.+.+++.+...+...+.+.+..++ +++++.++..+...++|..+||.++|.+.|+.|++..|.+.+++.++...
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 311 AFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 666777777778888887777766 88999999999999999999999999999999999999988776666543
No 192
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.26 E-value=3.2e-10 Score=104.10 Aligned_cols=157 Identities=11% Similarity=0.032 Sum_probs=107.4
Q ss_pred HHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhc
Q 016374 214 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH 293 (390)
Q Consensus 214 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (390)
.......-+|...++ +|.++.+.+...+.+.++..++++..|+++||+|||+....+ .............
T Consensus 31 ~~~~~~p~l~~i~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~---------~~~~~~~~~~~~~ 100 (413)
T PRK15403 31 TTDLIQPGIINVVRD-FNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITG---------ALIFTLACAATLF 100 (413)
T ss_pred HHHhhccCHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHH---------HHHHHHHHHHHHH
Confidence 334445555665444 899999999999999999999999999999999999543321 1121112112222
Q ss_pred CCch-HHHHHHHHHHhhhccccccccchhcccc-CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHH
Q 016374 294 VDSP-AMAVLCMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGL 371 (390)
Q Consensus 294 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~ 371 (390)
.++. ...+.-.+.+.+.+.. .+.......+. ++++++++.++.+....++..+||.+.+.+.++.||+..|++.++.
T Consensus 101 a~~~~~l~~~r~l~Gi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~ 179 (413)
T PRK15403 101 TTSMTQFLIARFIQGTSICFI-ATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVM 179 (413)
T ss_pred cCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3333 3333334445544322 22233444444 4578899999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHH
Q 016374 372 YLVGTAVWNL 381 (390)
Q Consensus 372 ~~~~~~~~~~ 381 (390)
.+++.+..++
T Consensus 180 ~~i~~~~~~~ 189 (413)
T PRK15403 180 GLIAFVGLLL 189 (413)
T ss_pred HHHHHHHHHH
Confidence 7777655443
No 193
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.25 E-value=6.9e-09 Score=99.17 Aligned_cols=152 Identities=19% Similarity=0.236 Sum_probs=125.1
Q ss_pred cccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhh-hhhHHHHHHHHHHHHHHHHHhhhhhhh------hHHHHHHH
Q 016374 6 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIATALTPVAAKL------GLPFLLVV 78 (390)
Q Consensus 6 p~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~------~~~~l~~~ 78 (390)
..+.+.+|.++++...+...+....-+...++|.++|+ +||++.+.++.++..++..+.+++... .....+++
T Consensus 12 lYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~g 91 (654)
T TIGR00926 12 LYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLG 91 (654)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHH
Confidence 34567789999999999999998889999999999996 999999999999999999888765210 12335667
Q ss_pred HHHHhhccccchhhhhHHhhhcccCC---chhHHHHHHHHhhhhhhHhHHhhHHHHhhhc-------CChHHHHHHHHHH
Q 016374 79 RVFMGIGEGVAMPAMNNILSKWVPVA---ERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------GWPSVFYSFGSLG 148 (390)
Q Consensus 79 r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------gw~~~f~~~~~~~ 148 (390)
-.+..+|.|..-|...+...|.++++ +|.+.+.++..+.++|..+++.+..++.+.. +|...|.+.++..
T Consensus 92 LaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m 171 (654)
T TIGR00926 92 LALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILM 171 (654)
T ss_pred HHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHH
Confidence 78888899999999999999998754 4778899999999999999999999887443 6999999988888
Q ss_pred HHHHHHHHh
Q 016374 149 TVWFTVWLS 157 (390)
Q Consensus 149 ~~~~~~~~~ 157 (390)
++..++...
T Consensus 172 ~ia~lvf~~ 180 (654)
T TIGR00926 172 ILALIVFMA 180 (654)
T ss_pred HHHHHHHHH
Confidence 877665544
No 194
>PRK15075 citrate-proton symporter; Provisional
Probab=99.24 E-value=1.2e-10 Score=107.75 Aligned_cols=135 Identities=20% Similarity=0.176 Sum_probs=97.8
Q ss_pred ccccc-cccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHH-Hhh-hhhhhhHHHHHHHHHH
Q 016374 5 ILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA-LTP-VAAKLGLPFLLVVRVF 81 (390)
Q Consensus 5 lp~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~-~~~~~~~~~l~~~r~l 81 (390)
.|.+. +++|.++.+.++....+.++..++.++.|+++||+|||+.+..+..+..+... ... .....+...+.....+
T Consensus 261 ~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (434)
T PRK15075 261 TPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELW 340 (434)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 45544 44799999999999999999999999999999999999998776544433221 111 1111134444444555
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHH-hhhhhhHhHHhhHHHHhhhcCChH
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYS-GMYLGSVTGLAFSPFLIHRFGWPS 139 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~gw~~ 139 (390)
.|++.+...+....++.|.+|+++|+..+++... +..++..++|.+.+++.|+.|+++
T Consensus 341 ~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~ 399 (434)
T PRK15075 341 LSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKA 399 (434)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCch
Confidence 6666666666677889999999999999998654 444457789999999999888653
No 195
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.24 E-value=7.7e-11 Score=107.01 Aligned_cols=165 Identities=14% Similarity=-0.015 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Q 016374 208 HFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF 287 (390)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (390)
++..+.....+....|.+. +.+|.++.+.+++.+...++..++.++.|+++||+|||+....+. ......
T Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~---------~~~~~~ 73 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLV-EEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGL---------ILCAIV 73 (379)
T ss_pred hhHHHHhHHhhhhhhHHHH-HHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHH---------HHHHHH
Confidence 3445555666666677554 458999999999999999999999999999999999996543321 111111
Q ss_pred HHHHhcCCch-HHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHH-HHHHHHHhcCCchhHH
Q 016374 288 LTQLSHVDSP-AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGT-AATGYILQHGSWDDVF 365 (390)
Q Consensus 288 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~-~i~g~l~~~~g~~~~~ 365 (390)
.......++. ...+...+.+.+.+...........+..++|+|+++.++.+....+|..++| .+.+.+.+..+|+..+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 153 (379)
T TIGR00881 74 NLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVF 153 (379)
T ss_pred HHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHH
Confidence 1111112233 3334444445555544444444455555668899999999999999999999 4666777778999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 016374 366 KVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 366 ~~~~~~~~~~~~~~~~~ 382 (390)
++.+.+.++..+...+.
T Consensus 154 ~~~~~~~~~~~~~~~~~ 170 (379)
T TIGR00881 154 IVPGIIAIIVSLICFLL 170 (379)
T ss_pred HHHHHHHHHHHHHHhee
Confidence 88887766655544443
No 196
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.23 E-value=1.6e-10 Score=107.29 Aligned_cols=123 Identities=15% Similarity=0.182 Sum_probs=106.1
Q ss_pred CcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhhh
Q 016374 15 NPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMN 94 (390)
Q Consensus 15 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 94 (390)
++.+.+++.+...++..++.+++++++||+|+|+.+..+..+.+++.+...+.++ +.+.+.+..++.|++.+...+...
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~ 333 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGS-NLPLILVLIILAGFGQNFVTGLVW 333 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcch-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667788888899999999999999999999999999999888888777766531 566777788899999988889899
Q ss_pred HHhhhccc-------CCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCCh
Q 016374 95 NILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 138 (390)
Q Consensus 95 ~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 138 (390)
++++|..| ++++|...++.+....+|..+++.+.+.+.+..||.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 334 ALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99998865 456799999999999999999999999999887773
No 197
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.22 E-value=3.7e-10 Score=103.51 Aligned_cols=146 Identities=15% Similarity=0.201 Sum_probs=105.8
Q ss_pred cccccccCcCcchHHHHHHHH-HHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHh---hhhhhhhHHHHHHHH--
Q 016374 6 LPMSAEFNWNPATVGLIQSSF-FWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT---PVAAKLGLPFLLVVR-- 79 (390)
Q Consensus 6 p~i~~~~~~s~~~~g~~~s~~-~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~~~l~~~r-- 79 (390)
|.+.+++|.++++.+++.+.. ..+..++.++.|++.||+|||+.+..+..+..+..+.. ++.++ +.+.+.+.-
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~-~~~~~~~~~~~ 312 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPK-HLWTMALAIGI 312 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cHHHHHHHHHH
Confidence 346677899999999998665 45689999999999999999998877776666554433 34321 455555544
Q ss_pred --HHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHH
Q 016374 80 --VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 156 (390)
Q Consensus 80 --~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 156 (390)
+..|++.+...+....++.+.+|.+++ +..+...++|..+++.++|.+.|++||+..|.+.++++++..++.+
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 345555565666677777777765544 5555566777777777899999999999999998888877655543
No 198
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.21 E-value=1.7e-07 Score=85.80 Aligned_cols=255 Identities=9% Similarity=0.006 Sum_probs=158.7
Q ss_pred cccccccCc-----CcchHHHHHHHHHHHHHHH-HHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh--hh------
Q 016374 6 LPMSAEFNW-----NPATVGLIQSSFFWGYLLT-QIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK--LG------ 71 (390)
Q Consensus 6 p~i~~~~~~-----s~~~~g~~~s~~~~~~~~~-~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~------ 71 (390)
-+++|++.+ +.+.+.++-+...+...+. .++.+++++|++|++.+-.....+.....++++.-. .+
T Consensus 27 R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~ 106 (472)
T TIGR00769 27 RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTA 106 (472)
T ss_pred HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcH
Confidence 455666655 3467899999888877777 999999999999999988877777777766665410 01
Q ss_pred ---------------------HHHHHHHHHHHhhccccchh-hhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHH
Q 016374 72 ---------------------LPFLLVVRVFMGIGEGVAMP-AMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSP 129 (390)
Q Consensus 72 ---------------------~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 129 (390)
.|...+.-+...+-...... ......+|.++.+|-.|..++...+.++|..+++.+..
T Consensus 107 ~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~ 186 (472)
T TIGR00769 107 LADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIK 186 (472)
T ss_pred HHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12222333344443333444 66788999999999999999999999999999999988
Q ss_pred HHhhh--------cCCh----HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhc
Q 016374 130 FLIHR--------FGWP----SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILS 197 (390)
Q Consensus 130 ~l~~~--------~gw~----~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (390)
++.+. ..|. ..+.+.++...+...+. ++..+...++++..+.++ .+++++++.......+.++|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~---~~~k~k~k~~~~es~k~i~~ 262 (472)
T TIGR00769 187 YFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLY-WWVNRNVLTDPRSYNPAL---KEKKVKPKMSTMESLKFLVS 262 (472)
T ss_pred HHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcccCCccccchhh---ccccCCCCCCHHHHHHHHHh
Confidence 87731 1242 23333333333333333 333322222111111110 00111111222456778899
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccc----hhhhhhHhHHHHHHHHHHHHHHHHHHHhc
Q 016374 198 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTE----SGLFCVLPWLTMAFSANLGGWIADTLVSK 265 (390)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 265 (390)
+|.++.+.+...+.+...+.+....-..+++.+- |+.+ .|.+....++..++..++.+++.+|+|-+
T Consensus 263 S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 263 SPYILDLALLVIAYGISINLVEVTWKSKLKAQYP-SPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 9998888888888877777776655566666443 3322 23334444556666677778888888866
No 199
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.21 E-value=1.1e-09 Score=100.42 Aligned_cols=171 Identities=9% Similarity=0.007 Sum_probs=116.9
Q ss_pred hHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 016374 201 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG 280 (390)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 280 (390)
+...+...+...+.........|.+ ++++|.++.+.+++.+...++..++++..|++.||+|+|+.... ...
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~-------g~~ 76 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILL-------GLF 76 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH-------HHH
Confidence 4555666666666666666777766 55589999999999999999999999999999999999953322 222
Q ss_pred HHHHHHHHHH-HhcCCchH-HHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016374 281 FLGPAFFLTQ-LSHVDSPA-MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 358 (390)
Q Consensus 281 ~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~ 358 (390)
....+..... ....++.+ .....++.+.+.+...........+..+++++++..++.+....+|..++|.+.+.+...
T Consensus 77 l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~ 156 (410)
T TIGR00885 77 LYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILS 156 (410)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2222222211 11223333 344445556666655544444444555668899999999999999999999999887532
Q ss_pred --------------------------CCchhHHHHHHHHHHHHHHHH
Q 016374 359 --------------------------GSWDDVFKVSVGLYLVGTAVW 379 (390)
Q Consensus 359 --------------------------~g~~~~~~~~~~~~~~~~~~~ 379 (390)
.+|+.+|++.+++.++..++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 157 NLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred CCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 358888888877666655444
No 200
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.19 E-value=2.9e-10 Score=107.27 Aligned_cols=159 Identities=11% Similarity=-0.002 Sum_probs=106.6
Q ss_pred ccccccccCcCcchHHH------------HHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh--
Q 016374 5 ILPMSAEFNWNPATVGL------------IQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL-- 70 (390)
Q Consensus 5 lp~i~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~-- 70 (390)
.|.+.++.|.++.+.+. ......++..++.++.+++.||+|||+.++.+..+.+++..+.++....
T Consensus 311 ~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~ 390 (502)
T TIGR00887 311 QKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLS 390 (502)
T ss_pred cHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 45566677766543211 2334455666788899999999999999988888877776665543200
Q ss_pred hHHHHHHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhh----------cCChHH
Q 016374 71 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR----------FGWPSV 140 (390)
Q Consensus 71 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~----------~gw~~~ 140 (390)
+...+...-+...++.....+....+.+|.+|++.|+++.++.+....+|..++|.+.+.+.+. .++...
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 470 (502)
T TIGR00887 391 THGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHV 470 (502)
T ss_pred hhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHH
Confidence 1111111111111222223456677789999999999999999999999999999999998873 345667
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCC
Q 016374 141 FYSFGSLGTVWFTVWLSKAHSSPA 164 (390)
Q Consensus 141 f~~~~~~~~~~~~~~~~~~~~~~~ 164 (390)
|++.++..++..+. .++.||++.
T Consensus 471 ~~i~~~~~~~~~i~-~~~lpEt~~ 493 (502)
T TIGR00887 471 LEIFALFMFLGILF-TLLIPETKG 493 (502)
T ss_pred HHHHHHHHHHHHHH-heEeccCCC
Confidence 88887777766544 356677544
No 201
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.18 E-value=1.6e-08 Score=91.27 Aligned_cols=315 Identities=13% Similarity=0.056 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhhhHHhhhccc
Q 016374 23 QSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP 102 (390)
Q Consensus 23 ~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 102 (390)
.++-...+.+.+++.+.+.|+.|.|+.++++...........-+- |-+.++....+.|+|.+..+...-.+++|..+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~---N~y~~yfssallG~Gaallw~GqG~ylt~~st 132 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP---NSYYLYFSSALLGFGAALLWTGQGGYLTSNST 132 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc---chHHHHHHHHHhhhhHHheecccceehhhcCC
Confidence 677788888999999999999999999999999998887766555 46778899999999999999999999999999
Q ss_pred CCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhc--------CCh-HH-------HHHHHHHHHHHHH-----HHHhhccC
Q 016374 103 VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF--------GWP-SV-------FYSFGSLGTVWFT-----VWLSKAHS 161 (390)
Q Consensus 103 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--------gw~-~~-------f~~~~~~~~~~~~-----~~~~~~~~ 161 (390)
++++.+..++.......+..+|..+-..+...- +-+ .. +.+.-+..+.... ....+.|.
T Consensus 133 ~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~ 212 (461)
T KOG3098|consen 133 RETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPS 212 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCc
Confidence 999999999999999988888866544332210 111 11 1111111111111 11111111
Q ss_pred CCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHh--cCCc-ccchh
Q 016374 162 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV--LHFN-LTESG 238 (390)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~~-~~~~~ 238 (390)
+........ .+ +...+.....-+++++|++..+....+..+....-+....|..+.-. .+.+ ....+
T Consensus 213 ~~~~~~~~~-~~---------~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~a 282 (461)
T KOG3098|consen 213 KDVVNCKSS-SE---------TSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIA 282 (461)
T ss_pred cchhhhhhh-cc---------ccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHH
Confidence 111000000 00 00000012233567788888888777777666666666666655443 2222 22234
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHH--HHhcCC--------------ch-HHHH
Q 016374 239 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT--QLSHVD--------------SP-AMAV 301 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--------------~~-~~~~ 301 (390)
......+++.+++....+.+.||.++...... .............+. ..+.+. .. ...+
T Consensus 283 i~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~----~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~i 358 (461)
T KOG3098|consen 283 IYSIGIGLGEVIGGLDFSILSKRIRGFGRKPT----VLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALI 358 (461)
T ss_pred HHHHHHhHHHHHHHHHHHHHhhhhhhcccCcc----hhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHH
Confidence 44555667777777777777776654432221 111111211222221 111111 12 2233
Q ss_pred HHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 016374 302 LCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYI 355 (390)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l 355 (390)
...+.|.+ -.......+.......|++|..+.++...-+.++.+++-...+..
T Consensus 359 i~~l~G~~-D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 359 IGFLLGFG-DACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred HHHHHhhH-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 33333333 334455556666677799999999998888888877766665543
No 202
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.17 E-value=5.2e-10 Score=99.68 Aligned_cols=149 Identities=10% Similarity=0.075 Sum_probs=130.1
Q ss_pred CcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhhh
Q 016374 15 NPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMN 94 (390)
Q Consensus 15 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 94 (390)
++...|.+.+...+.-++...+..++.+|+|.|+.++++..++++=..++++++ |.+.+.+.+.+.|+-.+.......
T Consensus 257 g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~--~~~~i~~~klLH~~e~~l~lva~f 334 (412)
T PF01306_consen 257 GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFAT--NPWVISLIKLLHALEFPLLLVAAF 334 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT----SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhc--chHHHHHHHHHHHHHHHHHHHHHH
Confidence 456689999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHhhhcccCCchhHHHHHH-HHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 016374 95 NILSKWVPVAERSRSLALV-YSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAE 165 (390)
Q Consensus 95 ~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 165 (390)
.|+++.+|+|-.+....+. +....+|..+.+.++|.+.|+.|.+..|++.+.+.++..++..+.++++++.
T Consensus 335 kYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 335 KYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred HHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 9999999988888888774 7888999999999999999999999999999998888777777777665443
No 203
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.17 E-value=9.4e-10 Score=114.16 Aligned_cols=184 Identities=13% Similarity=0.055 Sum_probs=116.3
Q ss_pred hhhcCchhHHHHHHHHHHHHHHHHHhhchHH----HHhHhcCC-cccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCc
Q 016374 194 LILSKPPVWALIVSHFCHNWGTFILLTWMPT----YYNQVLHF-NLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLS 268 (390)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 268 (390)
.++|++++..+....++..+........++. .+.+..+. +....++..+...+..++.+++.|+++||++||+.+
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~ 85 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA 85 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence 4677888877777766666654433222221 22221122 123466777778888999999999999999999543
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHH
Q 016374 269 VTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFG 348 (390)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig 348 (390)
.. +..................+.+.+++..++.+.+.+...+.....+.+..++++++.++|+.++...+|..+|
T Consensus 86 ~~-----~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~ig 160 (1140)
T PRK06814 86 KI-----LKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLG 160 (1140)
T ss_pred HH-----HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHH
Confidence 21 1111111111111122223344445555555666666655555666677777899999999999999999999
Q ss_pred HHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh
Q 016374 349 TAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 349 ~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
|.++|++.+..+|+..|.....+.+++.++....
T Consensus 161 p~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1140)
T PRK06814 161 TIIGGLATISGNFVILVALLMGIAVLGWLASLFI 194 (1140)
T ss_pred HHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999988855555455444443333
No 204
>PRK10133 L-fucose transporter; Provisional
Probab=99.16 E-value=2.5e-09 Score=98.86 Aligned_cols=148 Identities=12% Similarity=0.085 Sum_probs=100.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 016374 200 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI 279 (390)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 279 (390)
.+....+..+...+.........|.+ ++.+|.|+.+.++..+...++..++++..|++.||+|+|+....+ .
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g-------~ 98 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITG-------L 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH-------H
Confidence 34556666677777788888888887 666899999999999999999999999999999999999543322 2
Q ss_pred HHHHHHHHHHH-HhcCCchH-HHHHHHHHHhhhccccccccchhccccCC-CcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016374 280 GFLGPAFFLTQ-LSHVDSPA-MAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYIL 356 (390)
Q Consensus 280 ~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~ig~~i~g~l~ 356 (390)
.....+..... ....++.. .....++.+.+.+........... +.++ +++....++.+....+|..++|.+.+.+.
T Consensus 99 ~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~-~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 99 FLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVT-VLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHH-HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22111111111 12233333 344445556665555444444443 4555 45556789999999999999999887654
No 205
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.15 E-value=8.7e-10 Score=91.93 Aligned_cols=158 Identities=13% Similarity=0.046 Sum_probs=119.3
Q ss_pred ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh-----hhHHHHHH
Q 016374 3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK-----LGLPFLLV 77 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~ 77 (390)
.--|++++++|.|.+|...+.+...+|..+ .++.|.+.||+|+|.++.+|.+...+|......+-+ .++|.+.+
T Consensus 23 ~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~ 101 (250)
T PF06813_consen 23 AYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCL 101 (250)
T ss_pred hhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHH
Confidence 345789999999999999999999999987 588999999999999999999999999887755421 25788888
Q ss_pred HHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHh
Q 016374 78 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 157 (390)
Q Consensus 78 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 157 (390)
..++.|.+.+....++...-.+.+| ++||.+.|+.-...+++..+-..+...+.+...-+..+.....+.++.+ ....
T Consensus 102 ~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l-~~~~ 179 (250)
T PF06813_consen 102 FLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCL-VAMF 179 (250)
T ss_pred HHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHH-HHhh
Confidence 8888888877777777777778885 7899999999999999988877776666654333333333333333333 3333
Q ss_pred hccCCC
Q 016374 158 KAHSSP 163 (390)
Q Consensus 158 ~~~~~~ 163 (390)
+.++.|
T Consensus 180 ~vr~~~ 185 (250)
T PF06813_consen 180 FVRPVP 185 (250)
T ss_pred heeccC
Confidence 344433
No 206
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.15 E-value=1.4e-09 Score=97.72 Aligned_cols=158 Identities=12% Similarity=-0.025 Sum_probs=111.4
Q ss_pred HhhchHHHHhHhcCCcccc-hhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcC-C
Q 016374 218 LLTWMPTYYNQVLHFNLTE-SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV-D 295 (390)
Q Consensus 218 ~~~~~~~~l~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 295 (390)
...+...++.+.+|+++.+ .|.+...+..+..+..+.+|++.||+|.|+.+. .+.+...+........ +
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~---------l~~l~Wsl~t~L~~fa~S 114 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLV---------LQALSFVCVWLLLLLGTS 114 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHH---------HHHHHHHHHHHHHHHHHH
Confidence 3444555666679999999 999999999999999999999999999994332 2222222222222222 2
Q ss_pred chHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCch---hHHHHHHHHH
Q 016374 296 SPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWD---DVFKVSVGLY 372 (390)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~---~~~~~~~~~~ 372 (390)
...+.+.=++.|.+.+... .....+..-+|+++|++++|+.+....+|.++++.+.+++ ...||+ ...++.....
T Consensus 115 l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~s~gWr~y~~Ln~Isl~s~ 192 (511)
T TIGR00806 115 VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-VTLGWISYSTLNIISLVFM 192 (511)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHHHHHHHHHH
Confidence 3344455566677766666 5555666777889999999999999999999999999994 455655 4455666666
Q ss_pred HHHHHHHHHhhcCC
Q 016374 373 LVGTAVWNLFSTGE 386 (390)
Q Consensus 373 ~~~~~~~~~~~~~~ 386 (390)
.++.++.+++.+.+
T Consensus 193 ~~a~~~a~~LP~~~ 206 (511)
T TIGR00806 193 TFSVFLALFLKRPK 206 (511)
T ss_pred HHHHHHHHhCCCCc
Confidence 66666666655433
No 207
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.14 E-value=1.9e-08 Score=89.24 Aligned_cols=318 Identities=14% Similarity=0.121 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhhhHHhh
Q 016374 19 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILS 98 (390)
Q Consensus 19 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 98 (390)
.+.+.-+..+...+..+.+.++.+|...+.=.....+++.++.++.++++ |.+.=+++-.+.+++.|........+..
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~--~v~~~l~Gv~las~ssg~GE~tfL~lt~ 138 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSP--SVWVRLLGVVLASLSSGLGEVTFLSLTH 138 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeecc--chhHHHHHHHHHhhhhhhhHHHHHHHHH
Confidence 35566667778888888899999998765556667778889999999999 8888889999999999988888888644
Q ss_pred hcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCC--hHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchhhh--
Q 016374 99 KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW--PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEK-- 174 (390)
Q Consensus 99 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw--~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 174 (390)
.+++ ...+-+.++.+.+.++|+..-..+.+ .|+ |..+.+...+.++..+..++.+|+++.+++..+.++.
T Consensus 139 -~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~~ 212 (402)
T PF02487_consen 139 -FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESEDE 212 (402)
T ss_pred -hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCc
Confidence 5543 35678888888888888887766666 665 7788877777766655555555543322211111100
Q ss_pred --h-hhhhcccCCC--CCCcchhhhhhc-CchhHHHHHHHHHHHHHHHHHhh-chHHHHhHhcCC-cccchhhhhhHhHH
Q 016374 175 --K-LIVSSCASKE--PVKTIPWGLILS-KPPVWALIVSHFCHNWGTFILLT-WMPTYYNQVLHF-NLTESGLFCVLPWL 246 (390)
Q Consensus 175 --~-~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~g~-~~~~~~~~~~~~~~ 246 (390)
+ ...++..+.+ ...+..+++-++ -|.....++-.+..++..+..+. ..|...-..... ...+..++...+.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ~ 292 (402)
T PF02487_consen 213 AEDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLLYQL 292 (402)
T ss_pred ccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHHHHH
Confidence 0 0011110111 111122222111 12222233333444444444432 223322111111 12334455566666
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH---HHHhcCCchH-HHHHHHHHHhhhccccccccchhc
Q 016374 247 TMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFL---TQLSHVDSPA-MAVLCMACSQGTDAFSQSGLYSNH 322 (390)
Q Consensus 247 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 322 (390)
+..+++--...+ |+ |+. .+..+.-..-...+ ......++.+ .+..++..|...+.........+.
T Consensus 293 GVFISRSS~~~~--ri--r~l-------wils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~ 361 (402)
T PF02487_consen 293 GVFISRSSLPFF--RI--RRL-------WILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRIS 361 (402)
T ss_pred HHhhhhcceeee--eh--hhH-------HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 666665443221 22 211 11111111111111 1111223333 344555557777777777777888
Q ss_pred cccCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 016374 323 QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYI 355 (390)
Q Consensus 323 ~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l 355 (390)
++.++|+|-.++|........|..++..+.-.+
T Consensus 362 ~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 362 EEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred hcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 888889999999999998888888887776544
No 208
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.14 E-value=2.3e-09 Score=93.77 Aligned_cols=174 Identities=14% Similarity=0.162 Sum_probs=116.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 016374 200 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI 279 (390)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 279 (390)
+++...+.........+.+.. +...+++++|+|+.|.+++.+...+.+.+.++..|.+.||+|.|++... ..
T Consensus 15 ~L~~S~~af~v~F~VW~l~s~-l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~-------s~ 86 (417)
T COG2223 15 NLWLSTLAFDVGFMVWTLFSP-LGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTIL-------SM 86 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHH-------HH
Confidence 344333333333333333333 3334446699999999999999999999999999999999999954221 11
Q ss_pred HH-HHHHHHHHHHhcCC-chHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016374 280 GF-LGPAFFLTQLSHVD-SPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 357 (390)
Q Consensus 280 ~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~ 357 (390)
.. +.-.+.+......+ .+.......++|.+.+.+ .........-.|||++|.++|+.. .+++|..+...+.+.+..
T Consensus 87 ~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasF-av~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~ 164 (417)
T COG2223 87 LLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASF-AVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAV 164 (417)
T ss_pred HHHHHHHHHHHHHccCCchHHHHHHHHHHhccccee-hcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHH
Confidence 11 12222222222222 224445555555554443 344455556677799999999988 999999999999999999
Q ss_pred cCC---chhHHHHHHHHHHHHHHHHHHhh
Q 016374 358 HGS---WDDVFKVSVGLYLVGTAVWNLFS 383 (390)
Q Consensus 358 ~~g---~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
..+ |+....+.....++..+..++..
T Consensus 165 ~~g~~~w~~~~~i~~~~l~v~~v~~~~~~ 193 (417)
T COG2223 165 AFGFLAWRNVAGIYVVALAIAAVLAWLGM 193 (417)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 988 88888888888888777776653
No 209
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.14 E-value=4.1e-10 Score=98.48 Aligned_cols=142 Identities=20% Similarity=0.186 Sum_probs=124.6
Q ss_pred ccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhcccc
Q 016374 9 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 88 (390)
Q Consensus 9 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 88 (390)
++++|++..+..++.-.-.+..+++++++|++.||+|.|+++..++++..+.++..-+.. .-..+.++-.+.|...|.
T Consensus 280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~--~~~~f~i~gll~g~s~G~ 357 (438)
T COG2270 280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE--GELDFWILGLLVGTSLGG 357 (438)
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc--ccHHHHHHHHHHHHhcch
Confidence 358999999999999999999999999999999999999999999999988888777766 556677778889999999
Q ss_pred chhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcC-ChHHHHHHHHHHHHHH
Q 016374 89 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWF 152 (390)
Q Consensus 89 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~f~~~~~~~~~~~ 152 (390)
.+..+.++..+..|++|-++.+|+++.....+..+||.+-+.+.+..| -|..+....++..+.+
T Consensus 358 ~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl 422 (438)
T COG2270 358 AQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGL 422 (438)
T ss_pred HHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhH
Confidence 999999999999999999999999999999999999999999988554 6777666555555544
No 210
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.13 E-value=2.4e-09 Score=96.11 Aligned_cols=179 Identities=11% Similarity=0.025 Sum_probs=130.3
Q ss_pred hhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHH
Q 016374 194 LILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVR 273 (390)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 273 (390)
+++.+++...+.+...+..++...+.+++=-+++| .+-.+..-|........+.++.-++.+++.+|.|+-+.+..+
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lg-- 442 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLG-- 442 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeeh--
Confidence 45677887777777777888888888888788888 576677777777778889999999999999999998654432
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCchHHHHHH-HHHHhhhccccccccchhccccCCCcchhHHHHHHHHH-HHHHHHHHHH
Q 016374 274 KIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAG-VLAGVFGTAA 351 (390)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~g~~ig~~i 351 (390)
+.+...=+.......++|..+.. .+-+...+.........+....||+.+.++.++..... .+|-.+|+.+
T Consensus 443 -------La~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslI 515 (618)
T KOG3762|consen 443 -------LACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLI 515 (618)
T ss_pred -------hhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhh
Confidence 22222223333334555554444 33444445444444455556667799999999987665 6799999999
Q ss_pred HHHHHhcCCchhHHHHHHHHHHHHHHHHHHh
Q 016374 352 TGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 352 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
+|.+.+..+-+..|.+.++.+++.++.....
T Consensus 516 GG~~v~~fg~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 516 GGFVVERFGARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred hhhhheeehhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998888887766554
No 211
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.12 E-value=1.6e-09 Score=97.58 Aligned_cols=149 Identities=19% Similarity=0.213 Sum_probs=100.3
Q ss_pred HHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 016374 216 FILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD 295 (390)
Q Consensus 216 ~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (390)
......+|.+.++ +|.++.+.++..+...++..++.+..|++.||+++|+....+ ......+... ....+
T Consensus 17 ~~~~~~lp~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~-------~~~~~~~~~~--~~~~~ 86 (355)
T TIGR00896 17 TSVGPLLPQIRSA-LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAG-------LLLIAAGILI--RSAPG 86 (355)
T ss_pred ccCcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHH-------HHHHHHHHHH--HHhcc
Confidence 3445667776666 799999999999999999999999999999999999643322 1111111111 11222
Q ss_pred chHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcC--CchhHHHHHHHHHH
Q 016374 296 SPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG--SWDDVFKVSVGLYL 373 (390)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~--g~~~~~~~~~~~~~ 373 (390)
.........+.+.+.+... +.......+..+++|+++.+..+....+|..+++.+.+.+.+.. +|+..|...++..+
T Consensus 87 ~~~l~~~~~~~g~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~ 165 (355)
T TIGR00896 87 TALLFAGTALIGVGIAIIN-VLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPAL 165 (355)
T ss_pred HHHHHHHHHHHHHHHHHHh-ccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 3333333344444444332 22333445566788999999999999999999999999988774 38888776665544
Q ss_pred HH
Q 016374 374 VG 375 (390)
Q Consensus 374 ~~ 375 (390)
+.
T Consensus 166 ~~ 167 (355)
T TIGR00896 166 LA 167 (355)
T ss_pred HH
Confidence 44
No 212
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.12 E-value=8.5e-10 Score=84.82 Aligned_cols=137 Identities=15% Similarity=0.121 Sum_probs=90.7
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccc
Q 016374 240 FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLY 319 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (390)
..+...++..++++..+++.||++||+.... ............. ...+.+.......+.+.+.+........
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 74 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRFGRKPVLLV-------GLFIFVLSTAMFA-LSSNITVLIIARFLQGFGAAFALVAGAA 74 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhcchhHHHHH-------HHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 3455678889999999999999999853221 1111111111111 1122333333444445544444333334
Q ss_pred hhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhc
Q 016374 320 SNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFST 384 (390)
Q Consensus 320 ~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 384 (390)
...+..++++|++..+..+....++..++|.+.+.+.+..+|+..+++.+...+++.+......+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 75 LIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred HHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCC
Confidence 44455566899999999999999999999999999999999999998888777777666555443
No 213
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.11 E-value=1.1e-09 Score=102.47 Aligned_cols=147 Identities=14% Similarity=0.096 Sum_probs=105.4
Q ss_pred hcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhc-CCchHHHHHHHHHH
Q 016374 229 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH-VDSPAMAVLCMACS 307 (390)
Q Consensus 229 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 307 (390)
+++.++.+.|.+.+.+.++..++++..|++.||+|+|+....+ .........+..... .+.....+.-++.|
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G 142 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIG-------MFLSSVISIVIPWAAGGGIALVVFCRVIQG 142 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHH-------HHHHHHHHHHHHHHHHcCchHHHHHHHHHH
Confidence 4688899999999999999999999999999999999644322 111111111111111 22233444455566
Q ss_pred hhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCchhHHHHHHHHHHHHHHHHHHh
Q 016374 308 QGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
.+.+...+.......+..++++|+++.|+.+....+|..++|.+.+.+.+. .+|+..|++.++..++..++.+..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 143 LAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVF 218 (465)
T ss_pred HhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHH
Confidence 666655555545555666668999999999999999999999999999998 499999999888777666555444
No 214
>TIGR00898 2A0119 cation transport protein.
Probab=99.11 E-value=1.4e-09 Score=103.01 Aligned_cols=140 Identities=13% Similarity=-0.011 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhhhHHhhhc
Q 016374 21 LIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKW 100 (390)
Q Consensus 21 ~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 100 (390)
+......+....+.++.+++.||+|||+.+..+.++.+++.++..+.++.+.+.....-++.+++.+...+....+..|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33345566777888999999999999999999999999888888777622224455556666677677778888999999
Q ss_pred ccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCCC
Q 016374 101 VPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 163 (390)
Q Consensus 101 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (390)
+|++.|+.++|+.+....+|..++|.+.+ + +..++..++.+.+...++..+... +.||+.
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~ 498 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTL-FLPETK 498 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHH-cCcCCC
Confidence 99999999999999999999999999988 4 445677788888777777655544 456644
No 215
>PRK09848 glucuronide transporter; Provisional
Probab=99.10 E-value=1.8e-09 Score=100.48 Aligned_cols=129 Identities=18% Similarity=0.137 Sum_probs=105.0
Q ss_pred ccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhcccc
Q 016374 9 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 88 (390)
Q Consensus 9 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 88 (390)
++.+|.++...++......++..++.++++++.||+|+|+.+..+..+..++.+...+.+..+.+.+++..++.|+|.+.
T Consensus 256 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~ 335 (448)
T PRK09848 256 RYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGV 335 (448)
T ss_pred eeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHH
Confidence 44567665555555555567788899999999999999999999999888888777665433567777778899999999
Q ss_pred chhhhhHHhhhcccCC-------chhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCC
Q 016374 89 AMPAMNNILSKWVPVA-------ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 137 (390)
Q Consensus 89 ~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 137 (390)
..+...++..|..|++ ++|...+..+....+|..+|+.+.+.+.+..|+
T Consensus 336 ~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 336 TMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999988654 359999999999999999999999998876665
No 216
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.09 E-value=3.4e-10 Score=105.12 Aligned_cols=154 Identities=17% Similarity=0.186 Sum_probs=138.6
Q ss_pred cccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhh--hHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 4 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG--GKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 4 ~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
.+|+..++.+.++.+.+.+.++..+...++.+..|+++|+.. ++.+..++++..+++...+++++ +++.+...-.+
T Consensus 320 ~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~--~~~~l~~~~~~ 397 (509)
T KOG2504|consen 320 YLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFAT--TYVGLIVFSIL 397 (509)
T ss_pred HHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHH
Confidence 467788899999999999999999999999999999999987 55667888888899999999999 99999999999
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcC-ChHHHHHHHHHHHHHHHHHHhhc
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVWLSKA 159 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~~ 159 (390)
.|++.|.........+.|..+.++-..+.|+.....+++.++||++.+.+.|..| |...|+..++..++....++...
T Consensus 398 fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 398 FGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999998888888899999999999999999999999999999999999999877 99999999988887765554443
No 217
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.09 E-value=2.9e-09 Score=95.30 Aligned_cols=184 Identities=12% Similarity=0.139 Sum_probs=137.8
Q ss_pred hhcCc-hhHHHHHHHHHHHHHHHHHhhchHHHHhHhcC----CcccchhhhhhHhHHHHHHHHHHHHHHHHHH-HhcCCc
Q 016374 195 ILSKP-PVWALIVSHFCHNWGTFILLTWMPTYYNQVLH----FNLTESGLFCVLPWLTMAFSANLGGWIADTL-VSKGLS 268 (390)
Q Consensus 195 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~ 268 (390)
.+++| .++.+...-+.-.++++++...+..|++...+ +|++++.-++..+..-.-...+++||++||+ |+|+.
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t- 94 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT- 94 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH-
Confidence 34544 57778888888999999999999999998888 9999988888888777778888999999996 66632
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhc-CCchHHHHHHHHHHhhhccccccccchhccccCCC--cchhHHHHHHHHHHHHH
Q 016374 269 VTTVRKIMQSIGFLGPAFFLTQLSH-VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPR--YSGVLLGLSNTAGVLAG 345 (390)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~ 345 (390)
.++.......+-....... .......+.+.++..+.+..=........+..+++ +|-.++++..+..++|+
T Consensus 95 ------I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGs 168 (498)
T COG3104 95 ------IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGS 168 (498)
T ss_pred ------HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHH
Confidence 2222222222222222221 23455666667777777766655555555555552 47888999999999999
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhcC
Q 016374 346 VFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTG 385 (390)
Q Consensus 346 ~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
.++|.+.+++.+..||+..|...++-+..+++.+++.+|.
T Consensus 169 l~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 169 LIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccch
Confidence 9999999999999999999999999999999988877643
No 218
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.08 E-value=4.1e-09 Score=95.51 Aligned_cols=153 Identities=18% Similarity=0.266 Sum_probs=122.6
Q ss_pred cccccC-cCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHH----HHHHHHH
Q 016374 8 MSAEFN-WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFL----LVVRVFM 82 (390)
Q Consensus 8 i~~~~~-~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l----~~~r~l~ 82 (390)
..+|.| .+.+..+.+.+...++-.+.-...+++..|+|.|+++.++.+..++=..+.+..++ +.+.. ++...++
T Consensus 233 yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~-~~~~~~~~~~l~q~lh 311 (400)
T PF03825_consen 233 YLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSD-PWPFIVALQLLGQLLH 311 (400)
T ss_pred HHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcC-CcHHHHHHHHHHHhhh
Confidence 446666 66777888888888899999999999999999999999999999998888888731 43333 3345679
Q ss_pred hhccccchhhhhHHhhhcccCCchhHHHHHHHH-hhhhhhHhHHhhHHHHhhhcCCh------HHHHHHHHHHHHHHHHH
Q 016374 83 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYS-GMYLGSVTGLAFSPFLIHRFGWP------SVFYSFGSLGTVWFTVW 155 (390)
Q Consensus 83 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~gw~------~~f~~~~~~~~~~~~~~ 155 (390)
|+..+..+.+...++.+..|++.|+++.++++. ..++|..+|..++|++.|++|-+ ..+.+.+.+.++..++.
T Consensus 312 G~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f 391 (400)
T PF03825_consen 312 GLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLF 391 (400)
T ss_pred hHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999876 46899999999999999987644 44555555555555555
Q ss_pred HhhccC
Q 016374 156 LSKAHS 161 (390)
Q Consensus 156 ~~~~~~ 161 (390)
+.+.+|
T Consensus 392 ~~~fk~ 397 (400)
T PF03825_consen 392 VILFKP 397 (400)
T ss_pred HhhccC
Confidence 555444
No 219
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.08 E-value=3.2e-09 Score=93.28 Aligned_cols=132 Identities=9% Similarity=0.086 Sum_probs=107.7
Q ss_pred ccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccch
Q 016374 11 EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAM 90 (390)
Q Consensus 11 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 90 (390)
++|.++++.++..+.+..+..++.+..+++.||+|+||.+..+..+..++.++....+ +...+ ..-.+.|++.+..+
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~--~~~~~-~~~~l~g~~~s~i~ 248 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTH--GYVAM-WFVLALGLFNSIMF 248 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC--CHHHH-HHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999999888888887776665555 33222 34557899999999
Q ss_pred hhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHH
Q 016374 91 PAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSL 147 (390)
Q Consensus 91 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~ 147 (390)
|...+...+..| ++.+++.++. ....+|..+.|++.|.+.|..|.+..|++..+.
T Consensus 249 P~~~s~a~~~~~-~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 249 PTIFSLALNALG-RHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHHHHHHHhhhh-hhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 999999988885 4456666765 566789999999999999999999998754433
No 220
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.05 E-value=1.2e-08 Score=94.51 Aligned_cols=159 Identities=10% Similarity=0.050 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHhhchHHHHhHhcC---Ccccc---hhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 016374 207 SHFCHNWGTFILLTWMPTYYNQVLH---FNLTE---SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG 280 (390)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~l~~~~g---~~~~~---~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 280 (390)
..++...-...+....| ++.++++ .+..+ .+..+....++..+++++.|++.||+|||+... .+
T Consensus 30 ~~~~~~~d~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~---------~~ 99 (432)
T PRK10406 30 GNLVEWFDFYVYSFCSL-YFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSML---------IS 99 (432)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH---------HH
Confidence 34444444444444444 4444453 33333 233444555666699999999999999995332 22
Q ss_pred HHHHHHHHHHHhcCCch---------HHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHH
Q 016374 281 FLGPAFFLTQLSHVDSP---------AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAA 351 (390)
Q Consensus 281 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i 351 (390)
..............++. .+...=.+.|.+.+...+.....+.+..|+++|+...++.+.....|..+++.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~ 179 (432)
T PRK10406 100 VCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLV 179 (432)
T ss_pred HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 22222221111111111 233333455666665555555555666677899999999888777887887776
Q ss_pred HHHHH--------hcCCchhHHHHHHHHHHHH
Q 016374 352 TGYIL--------QHGSWDDVFKVSVGLYLVG 375 (390)
Q Consensus 352 ~g~l~--------~~~g~~~~~~~~~~~~~~~ 375 (390)
...+. +..||+..|++.++..++.
T Consensus 180 ~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 180 VVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 55543 2579999999877766554
No 221
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.04 E-value=2e-09 Score=112.08 Aligned_cols=141 Identities=16% Similarity=0.203 Sum_probs=121.0
Q ss_pred cccccCcCcc-hHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhcc
Q 016374 8 MSAEFNWNPA-TVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGE 86 (390)
Q Consensus 8 i~~~~~~s~~-~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 86 (390)
+.+++|.+.. +.+++.+...++..++.++.|++.||+++|+.+.++.++.+++.++..+.. +.+.+++..++.|++.
T Consensus 259 ~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~ 336 (1146)
T PRK08633 259 AKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP--SLASVLVLFFLFGFSA 336 (1146)
T ss_pred HHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHH
Confidence 4567899988 999999999999999999999999999999999899888888888888888 8888888899999999
Q ss_pred ccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhh-cCChHHHHHHHHHHHH
Q 016374 87 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTV 150 (390)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~~~f~~~~~~~~~ 150 (390)
+...+...+++.+..|+++|+++++..+....+|..+++.+++.+... +++...|++.+.+.++
T Consensus 337 ~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 337 GLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 988888999999999999999999999999999998888888776542 3455566655554443
No 222
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.03 E-value=7.3e-09 Score=91.34 Aligned_cols=363 Identities=16% Similarity=0.109 Sum_probs=200.6
Q ss_pred ccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhh----hhhHHHH-HHHHHHHHHHHHHhhhhhhhhH-------
Q 016374 5 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKAVL-GFGVVWWSIATALTPVAAKLGL------- 72 (390)
Q Consensus 5 lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~l-~~~~~~~~~~~~~~~~~~~~~~------- 72 (390)
+|++.+++|++....+.+--..-+...+.+|+.|..+|| |||||.+ ..+.+..+++.++.+++. ++
T Consensus 55 ~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aa--Dig~~lgd~ 132 (498)
T KOG0637|consen 55 LTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAA--DIGLLLGDN 132 (498)
T ss_pred ccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHh--hhhHHhcCC
Confidence 577888899999998888888888889999999999995 9988875 556666777777887776 33
Q ss_pred ----------HHHHHHHHHHhhccccchhhhhHHhhhcccCCchhH-HHHHHHHhhhhhhHhHHhhHHHHhhhcCChH--
Q 016374 73 ----------PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSR-SLALVYSGMYLGSVTGLAFSPFLIHRFGWPS-- 139 (390)
Q Consensus 73 ----------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~-- 139 (390)
..++++--+.-++.-.....+-+++.|...+++|.+ +++.+..+..+|..+|..++++ .+|+-
T Consensus 133 ~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y----~~~~~~~ 208 (498)
T KOG0637|consen 133 ERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSY----LGLYKIF 208 (498)
T ss_pred cccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccc----cCceEEe
Confidence 333444445555555677788999999997776666 9999999999999999888874 34432
Q ss_pred HHHHHHHHHHHHHHHHHh-------hccCCC------CCCCCCchhhhhhhhhcccCCCCCCcchhhhhh-cCchhHHHH
Q 016374 140 VFYSFGSLGTVWFTVWLS-------KAHSSP------AEDPQLRPAEKKLIVSSCASKEPVKTIPWGLIL-SKPPVWALI 205 (390)
Q Consensus 140 ~f~~~~~~~~~~~~~~~~-------~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 205 (390)
+|...-...+.+..+-.. ...++. ++++...+. ...+....+.+...+....+. ..|.++.++
T Consensus 209 ~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~---~~~~~~~~~~~~~~e~fG~~~~mpr~m~~L~ 285 (498)
T KOG0637|consen 209 PFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKG---TTARSKSSKLPFLLEIFGALKVMPRPMRMLL 285 (498)
T ss_pred ehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCc---ccccccccCcchHHHHhchHhhCChhHHHHH
Confidence 222222222221111111 111110 011000000 000000011111011111122 245788889
Q ss_pred HHHHHHHHHHHHHhhchHHHHhH-hcCCcccc---------------hh-hhhhHhHHHHHHHHHHHHHHHHHHHhcCCc
Q 016374 206 VSHFCHNWGTFILLTWMPTYYNQ-VLHFNLTE---------------SG-LFCVLPWLTMAFSANLGGWIADTLVSKGLS 268 (390)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~---------------~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 268 (390)
+...+.+++...+..|...++-+ .++-++.. .| +=+.++.+...+.+...-++.||+|.|+..
T Consensus 286 i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y 365 (498)
T KOG0637|consen 286 IVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRY 365 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEE
Confidence 99999999888888777776654 23333221 11 224455666777888889999999966554
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH-Hhc-----------CCch-HHHHHHHHHHhhhccccccccchhc-cccCC--Ccchh
Q 016374 269 VTTVRKIMQSIGFLGPAFFLTQ-LSH-----------VDSP-AMAVLCMACSQGTDAFSQSGLYSNH-QDIAP--RYSGV 332 (390)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~-~~~-----------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~ 332 (390)
..+........++.+....... ..+ ...+ ......-..+.-.... ....+... .+..+ .-+|.
T Consensus 366 ~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~~g~~~a~t-~~~pf~~~s~~~~~sg~g~G~ 444 (498)
T KOG0637|consen 366 WGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAILGIPLAIT-FSIPFALASIEIGNSGLGQGL 444 (498)
T ss_pred eehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHHhCCccccc-cccccccccccccCccCCCCc
Confidence 4433222222222221111110 000 0001 1111111111111111 11122222 11222 23577
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHH
Q 016374 333 LLGLSNTAGVLAGVFGTAATGYILQHGSWD--DVFKVSVGLYLVGTA 377 (390)
Q Consensus 333 ~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~--~~~~~~~~~~~~~~~ 377 (390)
..|+.|..-.+.+++.....|.+.|..|-. ..+...+...+.+.+
T Consensus 445 ~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~~~~i 491 (498)
T KOG0637|consen 445 DLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALLIGGI 491 (498)
T ss_pred eeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHHHHHH
Confidence 888888888889999988889888885443 333333333333333
No 223
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.01 E-value=1.1e-09 Score=94.79 Aligned_cols=147 Identities=17% Similarity=0.079 Sum_probs=112.1
Q ss_pred cCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchH-HHHHHHHHHh
Q 016374 230 LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA-MAVLCMACSQ 308 (390)
Q Consensus 230 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 308 (390)
++-+..+.|++++...+.+++.+++.|.+.||+|+|- .+.+++.........+...+.+. .+++=.+-+.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~i---------pm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgv 171 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKI---------PMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGV 171 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhcccc---------HHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhh
Confidence 4556778999999999999999999999999999993 33344444444434444444444 3444455566
Q ss_pred hhccccccccchhccccCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhcC
Q 016374 309 GTDAFSQSGLYSNHQDIAPR-YSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTG 385 (390)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
+.............+..+.| +|++++|+.-....+|-.+||.++|.++|..|++.+|++.++++++...+.++..++
T Consensus 172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCc
Confidence 66666555555666666654 689999999999999999999999999999999999999999999988877766433
No 224
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.01 E-value=5.2e-09 Score=97.44 Aligned_cols=125 Identities=15% Similarity=0.162 Sum_probs=110.5
Q ss_pred cccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhh----------hhhhHHHHHHHH
Q 016374 10 AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA----------AKLGLPFLLVVR 79 (390)
Q Consensus 10 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~r 79 (390)
+++|.++.+.|.......++..++....+++.+|++.|+++..+.++.+++....... + +.+.+...-
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~--~~~~~~~~~ 358 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGIS--DEVFVLGDS 358 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCC--Ceeeeeehh
Confidence 5789999999999999999999999999999999999999999999999887554311 2 334455667
Q ss_pred HHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcC
Q 016374 80 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 136 (390)
Q Consensus 80 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 136 (390)
++.+++.+....+...++.+..|+++++...++..+..++|..+++.+++.+.++.|
T Consensus 359 ~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 359 IIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 888988888888899999999999999999999999999999999999999998777
No 225
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.00 E-value=1.1e-09 Score=98.16 Aligned_cols=146 Identities=18% Similarity=0.198 Sum_probs=131.0
Q ss_pred cccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccc
Q 016374 10 AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVA 89 (390)
Q Consensus 10 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 89 (390)
||.+..+...|........+-.+.-++.+++.+|+|+-+++..++.+..+=.+..++.+ |.|+.+-..+++|+..+..
T Consensus 399 ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~--n~W~vLPieilqgit~ali 476 (618)
T KOG3762|consen 399 EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ--NPWMVLPIEILQGITHALI 476 (618)
T ss_pred hhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc--CchheeeHHHHHHHHHHHH
Confidence 56666677777777777888888889999999999999999999999999999999999 9999999999999999999
Q ss_pred hhhhhHHhhhcccCCchhHHHHHHHH-hhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHh
Q 016374 90 MPAMNNILSKWVPVAERSRSLALVYS-GMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 157 (390)
Q Consensus 90 ~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 157 (390)
+.+..+|+++..||+-|..+.++.+. ..++|--+|.++||.+.+.+|=|..|.+.++.+++.+++...
T Consensus 477 Waa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 477 WAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999866 558999999999999999999999999999888877654443
No 226
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.00 E-value=9.8e-09 Score=92.55 Aligned_cols=155 Identities=10% Similarity=0.013 Sum_probs=98.1
Q ss_pred HHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHH-----HhcCCchhHHHHHHHHHHHHHHHHH--HH
Q 016374 217 ILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL-----VSKGLSVTTVRKIMQSIGFLGPAFF--LT 289 (390)
Q Consensus 217 ~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 289 (390)
......|.+.+| .|.|..+.+..... .+...+ .++.|++.||+ ||||. .+. .+....+.. ..
T Consensus 6 ~~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~-------~l~-~~~~~~~~~~~~l 74 (356)
T TIGR00901 6 LVGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRS-------WLV-LTQVLLLSLLLIL 74 (356)
T ss_pred hHHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHH-------HHH-HHHHHHHHHHHHH
Confidence 345567888887 69999999988644 444444 88999999998 66642 111 111111111 11
Q ss_pred HHh-cCCchHHH-HHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------
Q 016374 290 QLS-HVDSPAMA-VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS------- 360 (390)
Q Consensus 290 ~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g------- 360 (390)
... .....+.. ....+.+........+......+..++|+|+.+.|+......+|..+++.+.+.+.+..+
T Consensus 75 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~ 154 (356)
T TIGR00901 75 SFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLIT 154 (356)
T ss_pred HcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Confidence 111 11222222 222233333332222233334455567899999999999999999999999999998877
Q ss_pred -chhHHHHHHHHHHHHHHHHHHh
Q 016374 361 -WDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 361 -~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
|+..|++.+++.++..+..++.
T Consensus 155 ~wr~~f~i~ai~~l~~~~~~~~~ 177 (356)
T TIGR00901 155 LWGYIFFWTALLILPGLLVTLFL 177 (356)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999988877766554443
No 227
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.00 E-value=2.8e-08 Score=92.97 Aligned_cols=175 Identities=11% Similarity=0.074 Sum_probs=106.6
Q ss_pred hcCchhHHHHHHHHHHHHHH----HHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhH
Q 016374 196 LSKPPVWALIVSHFCHNWGT----FILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTT 271 (390)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~ 271 (390)
+++|+++..+....+..... ......++...+| .|-+ ....++.....++..++.++.|+++|.+|||.
T Consensus 37 ~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~----- 109 (599)
T PF06609_consen 37 YRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRY----- 109 (599)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchH-----
Confidence 45666665544333333222 2223334544444 5655 45567778888999999999999999999993
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCch-HHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHH
Q 016374 272 VRKIMQSIGFLGPAFFLTQLSHVDSP-AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTA 350 (390)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~ 350 (390)
+...+.+............++. .......+.+.+.+... .......+..|.|.|....++.....-....++|.
T Consensus 110 ----~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ 184 (599)
T PF06609_consen 110 ----FFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPL 184 (599)
T ss_pred ----HHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHH
Confidence 3333333333333322333333 33444455555543332 22333456666688988877766655555567788
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh
Q 016374 351 ATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 351 i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
+...+..+.+||+.|++..+...++++...++
T Consensus 185 ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~f 216 (599)
T PF06609_consen 185 IAQLFAAHSGWRWIFYIFIIWSGIALVLIFFF 216 (599)
T ss_pred HHHHhccCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 87777777899999999988888877665544
No 228
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.99 E-value=2e-08 Score=91.57 Aligned_cols=158 Identities=15% Similarity=0.101 Sum_probs=125.7
Q ss_pred cccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh-hHH------HHHHHHH
Q 016374 8 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL-GLP------FLLVVRV 80 (390)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~-~~~------~l~~~r~ 80 (390)
+-++-|+++.+..+..........+..+++..+.||+|||+.++.+..++.+..+++...... +.. ..+++.+
T Consensus 296 i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~ 375 (485)
T KOG0569|consen 296 IFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIF 375 (485)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 445668889999999999999999999999999999999999999999999988877654311 111 1234444
Q ss_pred HHhhcccc-chhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhc
Q 016374 81 FMGIGEGV-AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 159 (390)
Q Consensus 81 l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 159 (390)
+..++.+. ..|...-+.+|.+|++.|..+++.......+...+-...-..+.+..|= +.|....+++.+..+..++..
T Consensus 376 ~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~l 454 (485)
T KOG0569|consen 376 LFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYL 454 (485)
T ss_pred HHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhC
Confidence 44444333 3677888999999999999999999999888888877777777777776 788888889999988999999
Q ss_pred cCCCCCC
Q 016374 160 HSSPAED 166 (390)
Q Consensus 160 ~~~~~~~ 166 (390)
||++.+.
T Consensus 455 PETkgr~ 461 (485)
T KOG0569|consen 455 PETKGRT 461 (485)
T ss_pred cccCCCC
Confidence 9987544
No 229
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.99 E-value=6.7e-09 Score=91.31 Aligned_cols=147 Identities=29% Similarity=0.556 Sum_probs=119.1
Q ss_pred ccccccccCcCc--chHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Q 016374 5 ILPMSAEFNWNP--ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFM 82 (390)
Q Consensus 5 lp~i~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 82 (390)
.+.+.++++.+. .+.++..+.+.++..++.++.|++.||+|||+.+..+......+.+...+....+.+.+++.|..+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (338)
T COG0477 25 LPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQ 104 (338)
T ss_pred HHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 344556666555 478999999999999999999999999999988888887666666677777611388999999999
Q ss_pred hhccccchhhhhHHhhhcccC-CchhHHHHHHHH-hhhhhhHhHHhhHHHHhhh--cCChHHHHHHHHHHHHH
Q 016374 83 GIGEGVAMPAMNNILSKWVPV-AERSRSLALVYS-GMYLGSVTGLAFSPFLIHR--FGWPSVFYSFGSLGTVW 151 (390)
Q Consensus 83 G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~--~gw~~~f~~~~~~~~~~ 151 (390)
|++.+...+...+++.|+.|+ ++|+...+.... ...+|..+++.+++.+.+. .+||..|.+........
T Consensus 105 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (338)
T COG0477 105 GLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLLL 177 (338)
T ss_pred HhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 999999999999999999977 689999999988 6888999999888777654 67999777666555443
No 230
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.97 E-value=1.5e-08 Score=93.29 Aligned_cols=177 Identities=12% Similarity=0.067 Sum_probs=116.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHH----HHHhcCCchhHHHHH
Q 016374 200 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIAD----TLVSKGLSVTTVRKI 275 (390)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~~~~~~~~~~~~~~ 275 (390)
++..+....+..++++.....+.+.|+++ +|.++...+.+.....+..++.+++.|+++| |+||||....
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il----- 78 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIA----- 78 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHH-----
Confidence 34455566666777888888889999877 7999999999999999999999999999999 5999964332
Q ss_pred HHHHHHHHHHHHHHHHhcCCc--------------h---HH-HHHHHHHHhhhccccccccchhccccCCCcc--hhHHH
Q 016374 276 MQSIGFLGPAFFLTQLSHVDS--------------P---AM-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYS--GVLLG 335 (390)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~--------------~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g 335 (390)
.+.......+......+. . +. .....+.-........+......+..++++| +.+.+
T Consensus 79 ---~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~ 155 (477)
T TIGR01301 79 ---AGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANA 155 (477)
T ss_pred ---HHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHH
Confidence 111112122111111111 1 11 1122222333333444444444455555543 68999
Q ss_pred HHHHHHHHHHHHHHHHHHHH--Hhc-------------CCchhHHHHHHHHHHHHHHHHHHhhcC
Q 016374 336 LSNTAGVLAGVFGTAATGYI--LQH-------------GSWDDVFKVSVGLYLVGTAVWNLFSTG 385 (390)
Q Consensus 336 ~~~~~~~~g~~ig~~i~g~l--~~~-------------~g~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
+.+....+|+.+|+.+.+.. .+. .+++..|++.+++.+++.+...+..+|
T Consensus 156 ~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E 220 (477)
T TIGR01301 156 YFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKE 220 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 99999999999999999875 221 167789999888888887777665433
No 231
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.96 E-value=2.5e-08 Score=95.98 Aligned_cols=157 Identities=13% Similarity=0.094 Sum_probs=106.6
Q ss_pred HHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHh-----------
Q 016374 224 TYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS----------- 292 (390)
Q Consensus 224 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 292 (390)
.-+++.++++..+.|++.+...++..++.++.+++.||.+||+++..+. .+..++.+..++.-....
T Consensus 57 ~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~--ll~~lg~ll~alphf~~~~y~~~~~~~~~ 134 (633)
T TIGR00805 57 TTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGC--AIMGLGSFLLSLPHFLSGRYSYSTTVSST 134 (633)
T ss_pred hhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecH--HHHHHHHHHHhChHHhcCCcccccccccc
Confidence 3445558999999999999999999999999999999999998877653 333333333222110000
Q ss_pred -------------c-----------------C--C-chH-HHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHH
Q 016374 293 -------------H-----------------V--D-SPA-MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSN 338 (390)
Q Consensus 293 -------------~-----------------~--~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 338 (390)
. . + ... +++.-++.|.+.+.........+.+..++++|+...|+.+
T Consensus 135 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~ 214 (633)
T TIGR00805 135 GNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILE 214 (633)
T ss_pred ccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHH
Confidence 0 0 0 112 2334455566666555555555556666789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcC----------------------CchhHHHHHHHHHHHHHHHHHHh
Q 016374 339 TAGVLAGVFGTAATGYILQHG----------------------SWDDVFKVSVGLYLVGTAVWNLF 382 (390)
Q Consensus 339 ~~~~~g~~ig~~i~g~l~~~~----------------------g~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
....+|..+|+.+++.+.+.. +|+..|++.+++.++..+.++++
T Consensus 215 ~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 215 SIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFF 280 (633)
T ss_pred HHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999988642 25556777776666655544443
No 232
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.93 E-value=7.6e-10 Score=97.67 Aligned_cols=175 Identities=13% Similarity=0.111 Sum_probs=123.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 016374 201 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG 280 (390)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 280 (390)
...+++...+...-.+.+-...+. .++.+|.++...|++.....+...+.+++.|++.||++|++++..+...+ .+.
T Consensus 35 l~il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW--~~A 111 (493)
T KOG1330|consen 35 LVILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIW--TLA 111 (493)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHH--HHH
Confidence 334444555555545554443333 33448999999999999999999999999999999999997766554222 222
Q ss_pred HHHHHHHHHHHhcCCchHHHH-HHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 016374 281 FLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG 359 (390)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~ 359 (390)
..+.+. ....|.+. .=.+.|.+.....+.....+.+..+.++|++++++.+....+|..+|-...+.+.++.
T Consensus 112 v~~~~f-------s~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~ 184 (493)
T KOG1330|consen 112 VFASGF-------SNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT 184 (493)
T ss_pred HHHHHH-------HHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc
Confidence 222221 13334333 3345566666665555555555555579999999999999999999999988888885
Q ss_pred C-chhHHHHHHHHHHHHHHHHHHhhcC
Q 016374 360 S-WDDVFKVSVGLYLVGTAVWNLFSTG 385 (390)
Q Consensus 360 g-~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
+ ||+.|+..+++.++..++..++.++
T Consensus 185 ~~Wr~af~~~avl~vi~~~L~~~f~~e 211 (493)
T KOG1330|consen 185 FWWRWAFRGSAVLGVIVGLLVFLFVRE 211 (493)
T ss_pred cceEEEEEeehHHHHHHHHHHHhhccC
Confidence 5 9999999999999888877766443
No 233
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.92 E-value=5.2e-08 Score=79.95 Aligned_cols=345 Identities=14% Similarity=0.103 Sum_probs=177.8
Q ss_pred cccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccc
Q 016374 8 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEG 87 (390)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 87 (390)
+-+.++....++|.+.-...-..++...+.|.++||-|||+.-+.-.+.+.++++ .-.++ ++..++++|.+-|++.+
T Consensus 63 LYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSp--qYkVLmVGR~LGGiaTs 139 (454)
T KOG4332|consen 63 LYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSP--QYKVLMVGRVLGGIATS 139 (454)
T ss_pred eehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCC--ceEEEeehhhhhhHHHH
Confidence 3456677788888888777778889999999999999999976555555544443 34566 88999999999999999
Q ss_pred cchhhhhHH-hhhcccCCchhHH---H----HHHH-HhhhhhhHhHHhhHHHHhhhcC--ChHHHHHHHHHHHHHHHHHH
Q 016374 88 VAMPAMNNI-LSKWVPVAERSRS---L----ALVY-SGMYLGSVTGLAFSPFLIHRFG--WPSVFYSFGSLGTVWFTVWL 156 (390)
Q Consensus 88 ~~~~~~~~~-i~~~~~~~~r~~~---~----~~~~-~~~~~g~~~g~~~~~~l~~~~g--w~~~f~~~~~~~~~~~~~~~ 156 (390)
....+.-++ +.|.- ++|+.- . +-.. .+..+-.+++...+..+.++++ --.+|-..+....+...+.+
T Consensus 140 LLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil 217 (454)
T KOG4332|consen 140 LLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVIL 217 (454)
T ss_pred HHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHH
Confidence 888877665 55544 233321 1 1111 2333444555566666777654 44555433322222222222
Q ss_pred hhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHh-hchHHHHhHhcCCccc
Q 016374 157 SKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL-TWMPTYYNQVLHFNLT 235 (390)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~g~~~~ 235 (390)
.--.|.-.+..+ +++-..+ -+...+.+..++++.++--...+.-..++.+. .|.|..--+..+ .
T Consensus 218 ~~W~ENygdps~-~kdlltq-----------f~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~---i 282 (454)
T KOG4332|consen 218 SSWSENYGDPSE-NKDLLTQ-----------FKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE---I 282 (454)
T ss_pred hhhhhccCChhh-hHHHHHH-----------hhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCccc---C
Confidence 211221111111 1111000 01223345566666665555555555554443 344433222222 2
Q ss_pred chhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhc-----CCchH-HHHHHHHHHhh
Q 016374 236 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH-----VDSPA-MAVLCMACSQG 309 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~ 309 (390)
--|.+++.+.++.++|+-+..++..|-..|--.. ..+........+.+..... ...+. -.+.++.+-..
T Consensus 283 PhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~y-----mqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~c 357 (454)
T KOG4332|consen 283 PHGFIFATFMLASMLGSSLASRLLSRSSPKVESY-----MQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEAC 357 (454)
T ss_pred CchhHHHHHHHHHHHhhHHHHHHHhcCCcccchH-----HHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHH
Confidence 3477788888888888887777766544331111 1111111111111111111 11222 23334444444
Q ss_pred hccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCchhHHHHHHHHHHHHHHHH
Q 016374 310 TDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH--GSWDDVFKVSVGLYLVGTAVW 379 (390)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~--~g~~~~~~~~~~~~~~~~~~~ 379 (390)
.+...++....-.+.+|.+.|++.+-....--++-..++-..- =.|. .+-+..|-++.....++.+..
T Consensus 358 vGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLynl--h~~~~p~~tr~mf~icS~~~~~a~i~~ 427 (454)
T KOG4332|consen 358 VGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNL--HVDAFPTTTRNMFGICSAFLFVASILQ 427 (454)
T ss_pred HhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheec--ccccCccccchhhhhhHHHHHHHHHHH
Confidence 4444444444444555567887766554433333322221110 0111 344577777777777665544
No 234
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.92 E-value=2.8e-08 Score=93.05 Aligned_cols=130 Identities=11% Similarity=0.032 Sum_probs=101.4
Q ss_pred cccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhh---hhhhhHHHHHHHHHHHhh
Q 016374 8 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV---AAKLGLPFLLVVRVFMGI 84 (390)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~G~ 84 (390)
..+....+++..+++.+...++..++.+++++++||+|+|+.+..+..+..++.+...+ .+..+.+.+++.-++.|+
T Consensus 257 ~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~ 336 (473)
T PRK10429 257 YFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNI 336 (473)
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHH
Confidence 33333335666777878888899999999999999999999998888776666554432 121256777777888999
Q ss_pred ccccchhhhhHHhhhccc-------CCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCC
Q 016374 85 GEGVAMPAMNNILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 137 (390)
Q Consensus 85 ~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 137 (390)
+.+...+...++++|..| +++.|..++......-+|..+++.+.+.+.+..|+
T Consensus 337 ~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 337 GTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999888989999999865 33346689999999999999999999999886665
No 235
>PTZ00207 hypothetical protein; Provisional
Probab=98.92 E-value=6.1e-08 Score=91.23 Aligned_cols=157 Identities=11% Similarity=0.073 Sum_probs=93.5
Q ss_pred HHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhc-
Q 016374 215 TFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH- 293 (390)
Q Consensus 215 ~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 293 (390)
.+.+..+.|.. ++.+|++..+.+.+..... ......+..|++.||+|+|+....+ ..+...+..+.....
T Consensus 43 ~y~fsv~s~~L-~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig-------~ll~~iG~ll~ala~~ 113 (591)
T PTZ00207 43 MYAFNLISGAM-QARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLS-------MTVFCLGTLLFALTFQ 113 (591)
T ss_pred HHHHHHHHHHH-HHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHH-------HHHHHHHHHHHHHHhc
Confidence 44555555654 5558999999888876633 3335666789999999999543332 112111211222211
Q ss_pred ---CCchH-HHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHH
Q 016374 294 ---VDSPA-MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSV 369 (390)
Q Consensus 294 ---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~ 369 (390)
..+.+ +.+...+.+.+.+...... .....+..|++||.+.|+......+|+++.+.+...+.+ .+++..+++.+
T Consensus 114 ~~i~~s~~~l~l~r~l~G~G~~~~~~~~-~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~ 191 (591)
T PTZ00207 114 EVIEGSVVRLSVYNGLMTLGCMLFDLGA-VVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLM 191 (591)
T ss_pred ccccCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHH
Confidence 12333 3333444454443333333 333344567899999999999999999865555544444 35777777777
Q ss_pred HHHHHHHHHHHHh
Q 016374 370 GLYLVGTAVWNLF 382 (390)
Q Consensus 370 ~~~~~~~~~~~~~ 382 (390)
+..++..++...+
T Consensus 192 vl~~vv~ll~~~~ 204 (591)
T PTZ00207 192 SFALVVGILAIVF 204 (591)
T ss_pred HHHHHHHHHHHhh
Confidence 7777666555544
No 236
>PRK09669 putative symporter YagG; Provisional
Probab=98.91 E-value=2.6e-08 Score=92.60 Aligned_cols=122 Identities=11% Similarity=0.128 Sum_probs=96.1
Q ss_pred cchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhhhH
Q 016374 16 PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNN 95 (390)
Q Consensus 16 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 95 (390)
++..+.+.....+...++.+++++++||+|+|+.+..+.....+......+.+..+.+.+++..++.|++.+...+...+
T Consensus 263 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~a 342 (444)
T PRK09669 263 PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWS 342 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566677788889999999999999999999888876665444333322226777788889999999999999999
Q ss_pred HhhhcccC-------CchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCC
Q 016374 96 ILSKWVPV-------AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 137 (390)
Q Consensus 96 ~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 137 (390)
+++|..+. ++.|..++.......+|..+|+.+++.+.+..|+
T Consensus 343 m~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 343 MFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99998852 2346778999999999999999999999987776
No 237
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.90 E-value=8e-09 Score=88.96 Aligned_cols=118 Identities=17% Similarity=0.053 Sum_probs=84.1
Q ss_pred CCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhh
Q 016374 231 HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGT 310 (390)
Q Consensus 231 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (390)
+.+...+|.+.+.+.+...+.++..|.++||+||| .++.++....+........+.+...++..=+.+..+
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRk---------pvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~ 134 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRK---------PVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIF 134 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCch---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 33556688899999999999999999999999999 444455555555555544555553333323333333
Q ss_pred ccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016374 311 DAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 357 (390)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~ 357 (390)
.+........+.+..++|+|+.+++..++...+|..+||.++|++.+
T Consensus 135 kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 135 KGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred cCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 33333333444455556899999999999999999999999999988
No 238
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.89 E-value=1.1e-08 Score=84.49 Aligned_cols=132 Identities=13% Similarity=0.077 Sum_probs=104.6
Q ss_pred cccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHH-HHHHHHhhhhhhhhHHHHHHHHHHHhhcc
Q 016374 8 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW-SIATALTPVAAKLGLPFLLVVRVFMGIGE 86 (390)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 86 (390)
.++++|+|+...+.+.+.-..-.++.+++.|.++||+|++...+.+..+. ..+-....++ .+.=..+..+.|++.
T Consensus 291 F~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft----~lsPy~~m~~lGLsy 366 (459)
T KOG4686|consen 291 FQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT----FLSPYTSMTFLGLSY 366 (459)
T ss_pred HHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh----hccHHHHHHHHhhhH
Confidence 57899999999999999888888999999999999999998866554443 3344444443 233345667788887
Q ss_pred ccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcC---ChHHHHH
Q 016374 87 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG---WPSVFYS 143 (390)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g---w~~~f~~ 143 (390)
+.....-.+.++...|+++.|.+.+..+...++|..+.|.+.+.+.|..| |--.|.+
T Consensus 367 sllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl 426 (459)
T KOG4686|consen 367 SLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFL 426 (459)
T ss_pred HHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHH
Confidence 77666677888999999999999999999999999999999999998654 5444443
No 239
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.87 E-value=5.1e-08 Score=83.78 Aligned_cols=152 Identities=13% Similarity=0.120 Sum_probs=122.7
Q ss_pred ccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhh-hhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHh
Q 016374 5 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMG 83 (390)
Q Consensus 5 lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 83 (390)
+|++..|-|+|+.+.|+..+...+......+....+++| -++|+..+....++.++...+.+.+. -. .+..-++.|
T Consensus 231 LP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~--~~-~~lw~~llG 307 (395)
T COG2807 231 LPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPG--QL-PILWALLLG 307 (395)
T ss_pred HHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhh--hH-HHHHHHHHh
Confidence 588899999999999999999999999999999999996 45677777888888888888888873 22 222259999
Q ss_pred hccccchhhhhHHhhhccc-CCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhc-CChHHHHHHHHHHHHHHHHHHhhc
Q 016374 84 IGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWFTVWLSKA 159 (390)
Q Consensus 84 ~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~ 159 (390)
+|.|..++.+...+.+..+ +++-++..++.+....+=..+||.+.|++.|.. +|+..........++..+.-+..-
T Consensus 308 ~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~ 385 (395)
T COG2807 308 LGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAG 385 (395)
T ss_pred CccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999875 445566667777777777788999999999965 599998887777777665555443
No 240
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.83 E-value=1e-08 Score=87.90 Aligned_cols=131 Identities=12% Similarity=0.133 Sum_probs=100.7
Q ss_pred HHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhH--HHHHHHHHHHhhccccchhhhhHHhhhcccCC
Q 016374 27 FWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL--PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA 104 (390)
Q Consensus 27 ~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 104 (390)
.+.-..|.++.+++.||+|||++|....+++++..++...+...|. .+++.+|+.. ++.+.+.+.|..|.+|.+
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafi----sg~fqvaYvYtPEVyPTa 466 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFI----SGAFQVAYVYTPEVYPTA 466 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH----hchheEEEEecCcccchh
Confidence 4455678899999999999999999999999999998887764343 2334456554 344667789999999999
Q ss_pred chhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCCC
Q 016374 105 ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 163 (390)
Q Consensus 105 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (390)
-|+...|.-....-+|.++.|.++ +.....-..+..+.+...++..+...+++-|++
T Consensus 467 vRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtk 523 (528)
T KOG0253|consen 467 VRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETK 523 (528)
T ss_pred hhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccC
Confidence 999999999999999999999998 333233445566677777777766666655543
No 241
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.79 E-value=1e-07 Score=87.77 Aligned_cols=147 Identities=16% Similarity=0.194 Sum_probs=114.0
Q ss_pred hcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHH--h-cCCchHHHHHHHH
Q 016374 229 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL--S-HVDSPAMAVLCMA 305 (390)
Q Consensus 229 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~ 305 (390)
.+++++.+-+++.+....+.+++.+..|++.||+|.|++.. .+.+..++..... . ....+...+.=++
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~---------~~~~~sa~~t~l~P~aa~~~~~~~~~~R~l 137 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFF---------ISGLISALLTLLTPLAASIGFYLLLVLRFL 137 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHH---------HHHHHHHHHHHHHHHHHHhcchhhHHHHHH
Confidence 47788899999999999999999999999999999995432 2222222222211 1 2222334455566
Q ss_pred HHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCchhHHHHHHHHHHHHHHHHHHhhc
Q 016374 306 CSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFST 384 (390)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 384 (390)
.|.+.+...+.......+-.||++|++..++.....++|.+++-++.|.+.+. .||+..|++.+.+.++..+++.++.+
T Consensus 138 qGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 138 QGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred hHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 67777776666666777788889999999999999999999999999999999 99999999999999998888776644
No 242
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.77 E-value=2e-07 Score=79.39 Aligned_cols=360 Identities=12% Similarity=0.084 Sum_probs=220.3
Q ss_pred ccCcCcchHH-HHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccc
Q 016374 11 EFNWNPATVG-LIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVA 89 (390)
Q Consensus 11 ~~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 89 (390)
+.++++.+.. -+.-...-.+.+.-.+.=.+.|-.-.|++++.-.+.......+.-+.+ +.+.+=+.-+..|...+ .
T Consensus 35 ~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~--sV~~mQvlE~FyG~~tA-a 111 (433)
T KOG3810|consen 35 DKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGP--SVKAMQVLEFFYGPATA-A 111 (433)
T ss_pred CCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcC--CchheeeehhhcChHHH-H
Confidence 3445554432 233344455666677777889999999998888777788888888888 88888888888888865 5
Q ss_pred hhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcC--ChHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 016374 90 MPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG--WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDP 167 (390)
Q Consensus 90 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (390)
..+-++++-+..+|+++.++.+...+..-.|..+|..++..+.+.-. +...=.+......+.. ....++|..++..-
T Consensus 112 EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~-~~A~fLP~v~rSl~ 190 (433)
T KOG3810|consen 112 EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAV-LLALFLPRVKRSLY 190 (433)
T ss_pred HHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHH-HHHhhCCCCchhhh
Confidence 67778899999999999999999999999999999999988876432 2222222222222222 33334444442211
Q ss_pred CCchhhhhhhhhcccCCCCCC-------------cchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcC-Cc
Q 016374 168 QLRPAEKKLIVSSCASKEPVK-------------TIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLH-FN 233 (390)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-~~ 233 (390)
..+++++ ....+.++.+++. ..++.+..+||++..-.+-+.+...+++.+..+....-++... -.
T Consensus 191 f~~~~~~-~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~ 269 (433)
T KOG3810|consen 191 FHRLEDK-ISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPA 269 (433)
T ss_pred hhccccc-ceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCch
Confidence 1111111 1111111111100 1134455678888888888888888888888888877777521 11
Q ss_pred ccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHH-HHHHHhhhcc
Q 016374 234 LTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDA 312 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 312 (390)
....|..=+...+.++++.+..|.+.-++.|. ....+..+...-+..+......++.+.... ..++......
T Consensus 270 ~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~-------g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l 342 (433)
T KOG3810|consen 270 NVYNGAVEAVSTLLGAIAALAAGYLNINWNRW-------GDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQL 342 (433)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHheeeccchh-------hHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhh
Confidence 11234444555666777777777776555555 224444445555555555555555555444 4444444454
Q ss_pred ccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc-----------CCchhHHHHHHHHHHHHHHHHHH
Q 016374 313 FSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-----------GSWDDVFKVSVGLYLVGTAVWNL 381 (390)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~-----------~g~~~~~~~~~~~~~~~~~~~~~ 381 (390)
........+..+...|.-|..+|+..++.-+-+.+-..+ ..|. .-|..-|...+...+++..+...
T Consensus 343 ~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~ 419 (433)
T KOG3810|consen 343 TITIATFQIARNLSSELFGLVFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYL 419 (433)
T ss_pred hhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHH
Confidence 445555566677777888989998766655554444333 3342 12556788888888888766555
Q ss_pred hhcC
Q 016374 382 FSTG 385 (390)
Q Consensus 382 ~~~~ 385 (390)
..++
T Consensus 420 ~~~~ 423 (433)
T KOG3810|consen 420 MCRR 423 (433)
T ss_pred Hhhc
Confidence 4443
No 243
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.76 E-value=1.1e-06 Score=76.00 Aligned_cols=340 Identities=12% Similarity=-0.024 Sum_probs=184.1
Q ss_pred cccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhh-----hhhhHHHH-HHHHHHHHHHHHHhhhhhh--------
Q 016374 4 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD-----TVGGKAVL-GFGVVWWSIATALTPVAAK-------- 69 (390)
Q Consensus 4 ~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-----r~Grr~~l-~~~~~~~~~~~~~~~~~~~-------- 69 (390)
.+|.+.+.-|.|.++.+...- ....+. --++|.++.| |+||||.- +-+..+.+......+.-.+
T Consensus 52 ~iP~lL~ak~vSyt~~a~fS~-ay~P~s-LKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~ 129 (510)
T KOG3574|consen 52 AIPLLLQAKGVSYTSQAIFSF-AYWPFS-LKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGG 129 (510)
T ss_pred hhHHHhcCCCcchhhhhhhhh-hhhHHH-HHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCC
Confidence 567777777778777766432 222322 3678999999 99999873 3344444444333332210
Q ss_pred -hhHHHHHHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhh-------hcCCh---
Q 016374 70 -LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-------RFGWP--- 138 (390)
Q Consensus 70 -~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------~~gw~--- 138 (390)
+|...+...-++.-+..+.-..+.-.+.-...++++.|.+......+.+.|..++..+--.+.+ ..+|.
T Consensus 130 ~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~ 209 (510)
T KOG3574|consen 130 LPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQ 209 (510)
T ss_pred CcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCcc
Confidence 1333333344455555555666677777777788888888777777777777666544322221 11222
Q ss_pred ------HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHH
Q 016374 139 ------SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHN 212 (390)
Q Consensus 139 ------~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (390)
.-.+..+...++.-.+..+..+|++++.. ++.+.. + ...-.-++++++-|.+..........-
T Consensus 210 g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~--~e~~~~-i--------~~~yk~l~~vLklk~v~~la~i~lt~K 278 (510)
T KOG3574|consen 210 GFITLAGYLWFWGALFIVATTLVALLKKENDESVD--EELELG-I--------HESYKLLRDVLKLKSVRWLAGILLTGK 278 (510)
T ss_pred ceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhh--hhhhcC-H--------HHHHHHHHHHHcCccHHHHHHHHHHHH
Confidence 22334455555544444444444333211 111100 0 000223556788888888888888888
Q ss_pred HHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH-HHH
Q 016374 213 WGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFL-TQL 291 (390)
Q Consensus 213 ~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 291 (390)
.++.+-....+.-+.| .|++..+-+++..+....+++.....|+...+ +|+....-.. .-.-+........+ ...
T Consensus 279 ~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~--~~pl~~~lka-~~~R~~~~~~~t~Lv~~~ 354 (510)
T KOG3574|consen 279 LGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKWTAG--PRPLNVFLKA-VPYRLGGGLVQTALVWWT 354 (510)
T ss_pred HHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheeecCC--CCcchHHHHh-hhHHHHHHHHHHHHHhhh
Confidence 8888888888988888 59998887776655444455444444443331 1221111101 11111111111111 111
Q ss_pred hc-CC----chHHHHHHHH----HH-hhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 016374 292 SH-VD----SPAMAVLCMA----CS-QGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 360 (390)
Q Consensus 292 ~~-~~----~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g 360 (390)
+. .. .+....+..+ +. ............-.++..+|...|+.+.+.|+..++|+---..+..++.|..+
T Consensus 355 ~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 355 PTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred cccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 11 11 1111111111 11 11112222233333455667899999999999999999998899999988643
No 244
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.73 E-value=1.8e-07 Score=86.53 Aligned_cols=123 Identities=15% Similarity=0.160 Sum_probs=109.0
Q ss_pred CcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhhh
Q 016374 15 NPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMN 94 (390)
Q Consensus 15 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 94 (390)
++...+.+..+..++..++.+++++++||+|+|+.+..+..+.+++.++..+.+..|.+.+++.-++.|++.+...+...
T Consensus 258 ~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~ 337 (428)
T PF13347_consen 258 NEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPW 337 (428)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccc
Confidence 44677888889999999999999999999999999999999999999988877533789999999999999999999999
Q ss_pred HHhhhcccC-------CchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCC
Q 016374 95 NILSKWVPV-------AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 137 (390)
Q Consensus 95 ~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 137 (390)
++++|..+. ++.|..+|.......+|..+++.+.+.+.+..|+
T Consensus 338 a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 338 AMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred cccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 999998863 3458999999999999999999999988876554
No 245
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.68 E-value=2.2e-06 Score=75.01 Aligned_cols=162 Identities=13% Similarity=0.056 Sum_probs=109.8
Q ss_pred HHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHH-Hhc
Q 016374 215 TFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ-LSH 293 (390)
Q Consensus 215 ~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 293 (390)
....+..+-+.+++.++.+..+++++...+..+..+.++..+++.+|+|+|+ ..+........+..+.. ...
T Consensus 28 ~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~-------gi~lgL~l~avg~~lF~pAa~ 100 (422)
T COG0738 28 ITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKA-------GIVLGLLLYAVGAALFWPAAS 100 (422)
T ss_pred HhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHH-------HHHHHHHHHHHHHHHHhhhhh
Confidence 3444455556677779999999999999999999999999999999999993 23333333222222222 122
Q ss_pred CCchHHH-HHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc--------------
Q 016374 294 VDSPAMA-VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-------------- 358 (390)
Q Consensus 294 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~-------------- 358 (390)
...+..+ ...+..+.+.+..-......+...-+|+..+.-+.+.+.+..+|..++|.+++.+..+
T Consensus 101 ~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~ 180 (422)
T COG0738 101 SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAI 180 (422)
T ss_pred hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHH
Confidence 2333333 3344556666655555555555555667788889999999999999999999998872
Q ss_pred -----CCchhHHHHHHHHHHHHHHHHHHhh
Q 016374 359 -----GSWDDVFKVSVGLYLVGTAVWNLFS 383 (390)
Q Consensus 359 -----~g~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
..++.++...+...++..+.....+
T Consensus 181 ~~~~~~~v~~pYl~~~~~lvll~v~~~~~k 210 (422)
T COG0738 181 KGADASSVQFPYLILAGLLVLLAVLILLSK 210 (422)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 3466777777766666555544443
No 246
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.67 E-value=5.8e-08 Score=65.53 Aligned_cols=72 Identities=15% Similarity=0.208 Sum_probs=67.1
Q ss_pred cccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHH
Q 016374 2 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFL 75 (390)
Q Consensus 2 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l 75 (390)
++.+|.+++|.++|.++.|++.+.+.+|+.+|.+...++.++..+++.+..+.+...+..+.+++.+ +.+..
T Consensus 12 TplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~--~~~~w 83 (85)
T PF06779_consen 12 TPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTH--SFWLW 83 (85)
T ss_pred HhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh--chHHH
Confidence 5789999999999999999999999999999999999999998899999999999999999999998 65543
No 247
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.64 E-value=1.1e-06 Score=79.50 Aligned_cols=127 Identities=15% Similarity=0.127 Sum_probs=107.8
Q ss_pred ccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccch
Q 016374 11 EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAM 90 (390)
Q Consensus 11 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 90 (390)
-+|.++.+..+.......+..++.+++.++.+|+|+|+++..+.++..++.++.-+.+..+...+++..++.+++.+...
T Consensus 266 ~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~ 345 (467)
T COG2211 266 VLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIAN 345 (467)
T ss_pred EcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccc
Confidence 34556666777778888888888999999999999999999999999999999888876578889999999999999999
Q ss_pred hhhhHHhhhccc-------CCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCC
Q 016374 91 PAMNNILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 137 (390)
Q Consensus 91 ~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 137 (390)
+...++++|..+ +++-|...+......=+|..++..+.++..+..|+
T Consensus 346 ~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 346 PLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred cccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999988774 23347888888888889999999888888876654
No 248
>PRK11462 putative transporter; Provisional
Probab=98.60 E-value=1.1e-06 Score=81.80 Aligned_cols=123 Identities=13% Similarity=0.087 Sum_probs=86.5
Q ss_pred CcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhhh
Q 016374 15 NPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMN 94 (390)
Q Consensus 15 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 94 (390)
++...+.+.+.+.++..++.+++++++||+|+|+.+..+..+..+...+..+.+..+...+++.-++.|++.+...+...
T Consensus 261 ~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~ 340 (460)
T PRK11462 261 TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQW 340 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445667788889999999999999999999998776555444434433333321333444555667877776666667
Q ss_pred HHhhhccc-------CCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCC
Q 016374 95 NILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 137 (390)
Q Consensus 95 ~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 137 (390)
++++|..+ +++.|..++......-+|..+++.+++.+.+..|+
T Consensus 341 ~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 341 VMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77887765 23345666777888999999999999998876565
No 249
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.48 E-value=4.6e-06 Score=64.39 Aligned_cols=108 Identities=13% Similarity=0.174 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhhhHHhhhcc
Q 016374 22 IQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWV 101 (390)
Q Consensus 22 ~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 101 (390)
-.++......+.+++.+.+.+++|.|+.++++.+...+-.... +-+ +.+.++.+-++.|++.+..+.+...++.+..
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~--~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYP--NSYTLYPASALLGFGAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hhh--hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC
Confidence 4456666778888899999999999999999999988665543 455 6789999999999999999999999999999
Q ss_pred cCCchhHHHHHHHHhhhhhhHhHHhhHHHHh
Q 016374 102 PVAERSRSLALVYSGMYLGSVTGLAFSPFLI 132 (390)
Q Consensus 102 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 132 (390)
++++|+|..++.......+.++|..+...+.
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988888888877665543
No 250
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.45 E-value=2.1e-06 Score=79.38 Aligned_cols=148 Identities=14% Similarity=0.094 Sum_probs=108.7
Q ss_pred HhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 016374 228 QVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACS 307 (390)
Q Consensus 228 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (390)
++.+....+.+...+.+.++.+++.+.++.+.||++..+ .+..................+.+.....-++.|
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~--------~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llG 145 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSK--------GLSVSGILWGLFGFLTAAVHSFPGLIALRFLLG 145 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHH--------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 446677788899999999999999999999999999441 222222222222212222333444455566777
Q ss_pred hhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh------cCCchhHHHHHHHHHHHHHHHHHH
Q 016374 308 QGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ------HGSWDDVFKVSVGLYLVGTAVWNL 381 (390)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~------~~g~~~~~~~~~~~~~~~~~~~~~ 381 (390)
.+.+...+.....+..-..+++|+.-+|+.+...++|+++|+.+...+.+ ..||++.|++-+++.++..++.++
T Consensus 146 l~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~ 225 (495)
T KOG2533|consen 146 LFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFF 225 (495)
T ss_pred HHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEE
Confidence 77777777777777777777899999999999999999999999988653 378999999999888887766555
Q ss_pred hh
Q 016374 382 FS 383 (390)
Q Consensus 382 ~~ 383 (390)
..
T Consensus 226 ~l 227 (495)
T KOG2533|consen 226 FL 227 (495)
T ss_pred Ee
Confidence 43
No 251
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.44 E-value=3.7e-06 Score=70.40 Aligned_cols=160 Identities=11% Similarity=0.043 Sum_probs=93.8
Q ss_pred HHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhc
Q 016374 214 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH 293 (390)
Q Consensus 214 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (390)
..+.+..|.|..- +.+|+|++|...+.....++..+ .+..|.+.||++.+.. ...+......+........
T Consensus 17 t~Y~Fs~yS~~Lk-~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~-------l~iG~~~~~~GY~~~~l~~ 87 (250)
T PF06813_consen 17 TTYTFSAYSPQLK-SRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVV-------LLIGAVLGFVGYGLLWLAV 87 (250)
T ss_pred cccchhhhhHHHH-HHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHH-------HHHHHHHHHHHHHHHHHHH
Confidence 3445555555554 55899999999998888888876 4889999999998832 2222222222222222111
Q ss_pred -----CCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHH
Q 016374 294 -----VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVS 368 (390)
Q Consensus 294 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~ 368 (390)
..+.+.......++.......+........+..|++||++.|+.-....+++.+-..+...+.+...-...+...
T Consensus 88 ~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la 167 (250)
T PF06813_consen 88 SGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLA 167 (250)
T ss_pred hCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 123333333333333333333344444444556789999999999999999999888887777663223333333
Q ss_pred HHHHHHHHHHHHHh
Q 016374 369 VGLYLVGTAVWNLF 382 (390)
Q Consensus 369 ~~~~~~~~~~~~~~ 382 (390)
....+++.+...+.
T Consensus 168 ~~~~~v~l~~~~~v 181 (250)
T PF06813_consen 168 VLPAVVCLVAMFFV 181 (250)
T ss_pred HHHHHHHHHHhhhe
Confidence 33344444443333
No 252
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.43 E-value=1.3e-05 Score=76.08 Aligned_cols=133 Identities=13% Similarity=0.083 Sum_probs=89.4
Q ss_pred hhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhcccccc
Q 016374 237 SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQS 316 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (390)
.+++.+...++..+++++.|+++|++|||+.+ ..+......+..+.... .+...+...=++.|.+.+.....
T Consensus 91 ~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l-------~~~~~~~~iG~ii~~~a-~~~~~l~~GR~l~G~g~G~~~~~ 162 (513)
T KOG0254|consen 91 QGLLTSILNLGALVGSLLAGRLGDRIGRKKTL-------LLAVVLFLIGAIIIALA-PSWYQLIVGRILTGLGVGGASVL 162 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH-------HHHHHHHHHHHHHHHHh-hhHHHHHHHHHHhccchhhhhhc
Confidence 37889999999999999999999999999432 22222222222222221 13344455556667666666544
Q ss_pred ccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCchhHHHHHHHHHHHHHHH
Q 016374 317 GLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH--GSWDDVFKVSVGLYLVGTAV 378 (390)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~--~g~~~~~~~~~~~~~~~~~~ 378 (390)
......+..|++.||...+..+....+|..++ .+.+...++ .+|+..+.+..+..++..+.
T Consensus 163 ~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 163 APVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG 225 (513)
T ss_pred chhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH
Confidence 44444444445799999999999999888888 566666555 38998887777777766666
No 253
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.42 E-value=0.0015 Score=60.65 Aligned_cols=247 Identities=11% Similarity=0.058 Sum_probs=145.0
Q ss_pred CcchHHHHHHHHHH-HHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhh--hh----------------------
Q 016374 15 NPATVGLIQSSFFW-GYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA--AK---------------------- 69 (390)
Q Consensus 15 s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~---------------------- 69 (390)
.++.+..+-....+ ...+......+++||++|++++-.....+.....++++. |.
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 45566666665555 445668889999999999999877666666665555542 10
Q ss_pred -----hhHHHHHHHHHHHhhccccchh-hhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhh---------h
Q 016374 70 -----LGLPFLLVVRVFMGIGEGVAMP-AMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH---------R 134 (390)
Q Consensus 70 -----~~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---------~ 134 (390)
.+.|...+.-++.-+-.....+ .-..+..|.++.+|-.|..++...+.++|.+++..+..++.+ .
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~ 215 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGV 215 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Confidence 0112222222232322222222 356788999999999999999999999999999988888877 1
Q ss_pred cCChHHHHH----HHHHHHHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHH
Q 016374 135 FGWPSVFYS----FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFC 210 (390)
Q Consensus 135 ~gw~~~f~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (390)
..|...+.. ..+.+.+.. .......+...++++..++++ .++.+.++.....+.+.++|+|.+..+++...+
T Consensus 216 ~~~~~~l~~l~~~v~~~g~~i~-~~~~~~~~~vl~~~~~~~~~~---~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~ 291 (491)
T PF03219_consen 216 DAWELSLNSLMGIVLILGIVII-LLYRYMNKNVLTDPRFYPSAK---KKKKKKPKMSLKESFKLLLKSKYLLCIALLVIA 291 (491)
T ss_pred ccHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHccCccccchhhh---cccccCCCccHHHHHHHHHhCHHHHHHHHHHHH
Confidence 235443321 112222222 222222222211111100000 011111122224567778899999888888888
Q ss_pred HHHHHHHHhhchHHHHhHhcCCcccc---hhhhhhHhHHHHHHHHHHHHHHHHHHHhc
Q 016374 211 HNWGTFILLTWMPTYYNQVLHFNLTE---SGLFCVLPWLTMAFSANLGGWIADTLVSK 265 (390)
Q Consensus 211 ~~~~~~~~~~~~~~~l~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 265 (390)
.+.....+....-..+++.+.-+.+. .|......++..++..++++.+.+|+|-+
T Consensus 292 Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 292 YGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 88888777776666666644322222 23344555666666677788888888866
No 254
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.40 E-value=3.5e-06 Score=80.10 Aligned_cols=140 Identities=16% Similarity=0.099 Sum_probs=103.4
Q ss_pred cCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH-HHHHh
Q 016374 230 LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACSQ 308 (390)
Q Consensus 230 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 308 (390)
...+.....+..+.+.++..+|.++.|.++||+|||+. ...++....+.-......++...+.++ ++.|+
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~---------~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPV---------LLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGF 183 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHH---------HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 45667777888899999999999999999999999943 333333333333344445555555444 44566
Q ss_pred hhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH
Q 016374 309 GTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 381 (390)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 381 (390)
+.............+..+|++|+.+..+ ......++.+++...+++.. +|++.+++......+..+..++
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l 253 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFL 253 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHc
Confidence 6555555555566677788999999999 88889999999999999888 8999999988888877666333
No 255
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.36 E-value=2.1e-05 Score=69.51 Aligned_cols=148 Identities=14% Similarity=0.095 Sum_probs=123.1
Q ss_pred ccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhh-hhhhHHHHHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHhhcc
Q 016374 9 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD-TVGGKAVLGFGVVWWSIATALTPVAAK-LGLPFLLVVRVFMGIGE 86 (390)
Q Consensus 9 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~ 86 (390)
.|-||+|..|..-++.....+..++....|++.. |.++|+.-.+++....++..+..++.. .+.+.+-..-++.|++.
T Consensus 236 g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~ 315 (403)
T PF03209_consen 236 GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGN 315 (403)
T ss_pred hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhh
Confidence 3558999999999999999999999999999988 688888888888888877766544421 16788889999999999
Q ss_pred ccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhh----------cCChHHHHHHHHHHHHHHHHHH
Q 016374 87 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR----------FGWPSVFYSFGSLGTVWFTVWL 156 (390)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~----------~gw~~~f~~~~~~~~~~~~~~~ 156 (390)
|.......+...|..++++.|..+|.+.....++..++..+++.+.|. .+|..+|.+.++..++...+..
T Consensus 316 G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 316 GLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred hHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998762 2356677777766666654443
No 256
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.32 E-value=0.00018 Score=68.14 Aligned_cols=151 Identities=15% Similarity=0.151 Sum_probs=117.8
Q ss_pred cccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhh-hhhHHHHHHHHHHHHHHHHHhhhhhh---------------
Q 016374 6 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIATALTPVAAK--------------- 69 (390)
Q Consensus 6 p~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~--------------- 69 (390)
..+.++++.+...+.-..+.+.-......+.++.++|. +||-+++.++.++...+..+..++..
T Consensus 62 ~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~ 141 (571)
T KOG1237|consen 62 TYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGG 141 (571)
T ss_pred HHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCC
Confidence 44567778777777778888888888889999999996 78999999999988888655443220
Q ss_pred --------hhHHHHHHHHHHHhhccccchhhhhHHhhhccc---C-C--chhHHHHHHHHhhhhhhHhHHhhHHHHhhhc
Q 016374 70 --------LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP---V-A--ERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 135 (390)
Q Consensus 70 --------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~---~-~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 135 (390)
.....++.+.-+..+|.|..-|...+.-+|-++ + + ++...+.++....+.|..++..+..+.-+..
T Consensus 142 ~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~ 221 (571)
T KOG1237|consen 142 NVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNV 221 (571)
T ss_pred CcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 012356667778888999999999999999887 2 2 2347889999999999999998888888889
Q ss_pred CChHHHHHHHHHHHHHHHHHH
Q 016374 136 GWPSVFYSFGSLGTVWFTVWL 156 (390)
Q Consensus 136 gw~~~f~~~~~~~~~~~~~~~ 156 (390)
+|.+.|.+..+...+..++.+
T Consensus 222 ~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 222 GWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred cceeeccHHHHHHHHHHHHHH
Confidence 999999988877777655444
No 257
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.31 E-value=6.9e-05 Score=67.74 Aligned_cols=348 Identities=11% Similarity=0.009 Sum_probs=171.3
Q ss_pred cccccccc--cCcCcchHHHHHHHHHHHHHHHHHhhHHhhh-----hhhhHHHHHH-HHHHHHHHHHHhhhhh-------
Q 016374 4 AILPMSAE--FNWNPATVGLIQSSFFWGYLLTQIAGGIWAD-----TVGGKAVLGF-GVVWWSIATALTPVAA------- 68 (390)
Q Consensus 4 ~lp~i~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-----r~Grr~~l~~-~~~~~~~~~~~~~~~~------- 68 (390)
.+|.+.++ -+.|.+|.+.. |.....+. .-++|.++.| |+||||.-++ ...+.++..+..+...
T Consensus 22 siPflL~~~~~~~sy~q~~~f-Sla~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m~~l~~~i~~~~~~~ 99 (544)
T PF13000_consen 22 SIPFLLQSMAKKVSYSQQAIF-SLASYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGILMLYLSYNISQWLLFD 99 (544)
T ss_pred cchhhhccccCCCChhHheee-eeeechhH-HHHhhhhhhhhhcccccCCcchhhhHHHHHHHHHHHHHHhccchhhccc
Confidence 45666666 67777777664 32222332 2556677666 8999988433 3344444333332211
Q ss_pred --------h-------hhHHHHHHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhh
Q 016374 69 --------K-------LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 133 (390)
Q Consensus 69 --------~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 133 (390)
+ .+...+...-++.=+-.+.-..+.-.+.-...++++++.+..-...+.+.|..++..+--.+.+
T Consensus 100 ~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlalns 179 (544)
T PF13000_consen 100 GVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALNS 179 (544)
T ss_pred ccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhCC
Confidence 0 0111122222222222233344455555556678888887776666666666665544333322
Q ss_pred ------h-------cCC---hHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchh-----h--hhhhhhcccCCC---CC
Q 016374 134 ------R-------FGW---PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPA-----E--KKLIVSSCASKE---PV 187 (390)
Q Consensus 134 ------~-------~gw---~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~---~~ 187 (390)
+ .|. ..-....+...++.-....++.+|+|..+...+.+ + .++...+.++++ .+
T Consensus 180 ~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (544)
T PF13000_consen 180 PDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSDGKSKEISIEYDESDVISTE 259 (544)
T ss_pred HHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccccccccccccccccceecccccccchh
Confidence 0 011 11122344444444445556666665332111100 0 000000111111 11
Q ss_pred Cc-------chhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHH
Q 016374 188 KT-------IPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIAD 260 (390)
Q Consensus 188 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 260 (390)
+. ....+++|-|++..+.+.....-.++.........=+.| .|++.++.+.+..+ .+...++.|+.+.
T Consensus 260 ~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~li----~~P~qii~~~~~~ 334 (544)
T PF13000_consen 260 EILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLVLI----DFPFQIILPYYIG 334 (544)
T ss_pred hhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHHHH----hhhHHHHHHHHhh
Confidence 11 123446778888888888888888888777777777778 69998887665544 4455555555555
Q ss_pred HHHhcCCch--------------------hH----HHHHHHHHHH-HHHHHHH----HHHhcC-CchHHHHHHH----HH
Q 016374 261 TLVSKGLSV--------------------TT----VRKIMQSIGF-LGPAFFL----TQLSHV-DSPAMAVLCM----AC 306 (390)
Q Consensus 261 ~~~~~~~~~--------------------~~----~~~~~~~~~~-~~~~~~~----~~~~~~-~~~~~~~~~~----~~ 306 (390)
|+.+.+... .+ +..+..+... +..+... ...+.. +....+...+ .+
T Consensus 335 Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l 414 (544)
T PF13000_consen 335 KWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVL 414 (544)
T ss_pred hhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHH
Confidence 554322210 00 0111111111 1111110 011111 1111122222 22
Q ss_pred Hhhhccccccccch-hccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016374 307 SQGTDAFSQSGLYS-NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 358 (390)
Q Consensus 307 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~ 358 (390)
..+..........+ ..+..+|..-|+.+.+.|+..++|+---..+.=++.|.
T Consensus 415 ~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 415 SSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 22222222222222 23455678999999999999999998887777777764
No 258
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.31 E-value=7e-06 Score=74.40 Aligned_cols=110 Identities=17% Similarity=0.284 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhh-------hHHHHHHHHHHHhhccccchhhhhHHhhhcccCC---chhHHHHHHHHhh
Q 016374 48 AVLGFGVVWWSIATALTPVAAKL-------GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA---ERSRSLALVYSGM 117 (390)
Q Consensus 48 ~~l~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 117 (390)
|+++++.++..+|.++..++... +...++++-.+.++|.|+.-|...++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 57788889999998885444211 2257888999999999999999999999999755 5788999999999
Q ss_pred hhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHh
Q 016374 118 YLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 157 (390)
Q Consensus 118 ~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 157 (390)
++|..++..+.+++-+++||.+.|.+.++..++..+..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999988887777655443
No 259
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.29 E-value=0.00021 Score=62.29 Aligned_cols=147 Identities=11% Similarity=0.028 Sum_probs=85.1
Q ss_pred hcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHh
Q 016374 229 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQ 308 (390)
Q Consensus 229 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (390)
.+|++..+++.++........+...+.|.+.||+|||+ ..+..+.+-....+ .. ..++....+..=+++.
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~--------~cl~~cily~~scl-~k-~~~~~~~L~~GRvlgG 132 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKK--------ACLLFCILYSLSCL-TK-HSSNYPVLLLGRVLGG 132 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH--------HHHHHHHHHHHHHH-HH-hccccHHHHHHHHHHH
Confidence 47999999999999999999999999999999999993 22222222222222 22 2233333333322222
Q ss_pred hhcccccccc--chh----ccccCCCcchhHHHHHHHH-HHHHHHHHHHHHHHHHhcCC--chhHHHHHHHHHHHHHHHH
Q 016374 309 GTDAFSQSGL--YSN----HQDIAPRYSGVLLGLSNTA-GVLAGVFGTAATGYILQHGS--WDDVFKVSVGLYLVGTAVW 379 (390)
Q Consensus 309 ~~~~~~~~~~--~~~----~~~~~~~~~~~~~g~~~~~-~~~g~~ig~~i~g~l~~~~g--~~~~~~~~~~~~~~~~~~~ 379 (390)
.......+.. +.+ ..+.+++..+...+..... +.+-.+.+..+.-++.|..+ ...+|.....+.+++.++.
T Consensus 133 iaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I 212 (354)
T PF05631_consen 133 IATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLI 212 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHH
Confidence 2222222221 111 1233444455555554422 33344555555556666644 4788999988888888776
Q ss_pred HHhhcC
Q 016374 380 NLFSTG 385 (390)
Q Consensus 380 ~~~~~~ 385 (390)
...+++
T Consensus 213 ~~~W~E 218 (354)
T PF05631_consen 213 LKTWPE 218 (354)
T ss_pred Hhcccc
Confidence 655444
No 260
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.20 E-value=1.5e-08 Score=94.42 Aligned_cols=159 Identities=13% Similarity=0.064 Sum_probs=107.3
Q ss_pred ccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhh--h--hhhhh---HHHHHH
Q 016374 5 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP--V--AAKLG---LPFLLV 77 (390)
Q Consensus 5 lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--~--~~~~~---~~~l~~ 77 (390)
.|.+.++.+.++. -.......+...++.+....+.||+|||+.++.+..+.+++.+..+ . .++.+ -...++
T Consensus 276 ~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 353 (451)
T PF00083_consen 276 SPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIV 353 (451)
T ss_pred ccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccce
Confidence 3556666666665 2222233445556677777999999999999999998888877664 1 11100 011112
Q ss_pred HHHHHhhccc-cchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHH
Q 016374 78 VRVFMGIGEG-VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 156 (390)
Q Consensus 78 ~r~l~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 156 (390)
.-.+.....+ ...+....+..|.+|.+.|.+..++......++..+++.+...+.+..+-...+.+.+..+++..+..+
T Consensus 354 ~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~ 433 (451)
T PF00083_consen 354 FLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVY 433 (451)
T ss_pred eeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhhee
Confidence 2112212222 234666688899999999999999999999999999998888877766634556666777777777778
Q ss_pred hhccCCCCC
Q 016374 157 SKAHSSPAE 165 (390)
Q Consensus 157 ~~~~~~~~~ 165 (390)
.+.||++.+
T Consensus 434 ~~lpET~g~ 442 (451)
T PF00083_consen 434 FFLPETKGK 442 (451)
T ss_pred EEEeeCCCC
Confidence 888887654
No 261
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.18 E-value=1.7e-05 Score=53.29 Aligned_cols=64 Identities=20% Similarity=0.278 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCC
Q 016374 203 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGL 267 (390)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 267 (390)
.+-..+++...+...+..++|.|+++ .|+++.++|.+.++..+..+++.++.|+++||.++++.
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~ 67 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKV 67 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHH
Confidence 34456777888889999999999998 69999999999999999999999999999999999853
No 262
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.14 E-value=5.4e-06 Score=55.67 Aligned_cols=55 Identities=16% Similarity=0.237 Sum_probs=47.8
Q ss_pred ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHH
Q 016374 3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 57 (390)
Q Consensus 3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 57 (390)
|.+|...++.|.|+.|+|.+.++..+...++.+++|.++||+++++..+....++
T Consensus 21 Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 21 PFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred hhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3456667889999999999999999999999999999999999999877765543
No 263
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.13 E-value=0.00012 Score=67.51 Aligned_cols=129 Identities=18% Similarity=0.087 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchhccc
Q 016374 245 WLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQD 324 (390)
Q Consensus 245 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (390)
++...+.++..|.++||+|||..+.. .+....+-........ ++.++ ..- ..+...........+..+
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~---------~~~~~~l~~~~~~~~~-~~~~~-~~~-l~g~~~~~~s~~~a~vad 139 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLL---------PLFGTILPALCLLFQG-YWFFL-LLG-LSGGFSAIFSVGFAYVAD 139 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHH---------HHHHHHHhHHHHHHHH-HHHhh-hcc-cccchhhhhhhhhhheee
Confidence 67888999999999999999943322 2221111111111111 33222 211 222222233444444444
Q ss_pred c-CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhcC
Q 016374 325 I-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTG 385 (390)
Q Consensus 325 ~-~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (390)
. ..++|....|+.+.....+..++|.+.+.+.+..|+...+.+..+..+++.+......++
T Consensus 140 is~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~E 201 (463)
T KOG2816|consen 140 ISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPE 201 (463)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccc
Confidence 4 447999999999999999999999999999999999999999999999888877666544
No 264
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.13 E-value=0.00013 Score=70.42 Aligned_cols=163 Identities=13% Similarity=0.022 Sum_probs=103.8
Q ss_pred HHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHH-HhcCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 016374 214 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL-VSKGLSVTTVRKIMQSIGFLGPAFFLTQLS 292 (390)
Q Consensus 214 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (390)
+++++...+..|+++.+|++...+..+...+....-+..+++|++.|++ |+++.... ...+...+..+....
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~-------~~ii~~lG~~llai~ 74 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILY-------LSIVYVVGHALLSFG 74 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH-------HHHHHHHHHHHHHhc
Confidence 3456667778888888899998888888887777778888999999975 55532221 111111111111111
Q ss_pred cCC-------chHHHHHHHHHHhhhccccccccchhccccCCC---cchhHHHHHHHHHHHHHHHHHHHHHHHHhc----
Q 016374 293 HVD-------SPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPR---YSGVLLGLSNTAGVLAGVFGTAATGYILQH---- 358 (390)
Q Consensus 293 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~---- 358 (390)
..+ ....++.+.+...|.+..-+.......+...++ .+-....+.....++|+.+++.+.+++.+.
T Consensus 75 a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~f 154 (654)
T TIGR00926 75 AIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCF 154 (654)
T ss_pred cCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 111 112333444444444444444433333433332 477788899999999999999999998754
Q ss_pred ---CCchhHHHHHHHHHHHHHHHHHHhh
Q 016374 359 ---GSWDDVFKVSVGLYLVGTAVWNLFS 383 (390)
Q Consensus 359 ---~g~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
.+|...|.+.+++++++.+++...+
T Consensus 155 g~~~~~~~aF~i~~i~m~ia~lvf~~g~ 182 (654)
T TIGR00926 155 GCQDCYPLAFGVPAILMILALIVFMAGS 182 (654)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 2588899999999998887766543
No 265
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=98.09 E-value=0.00013 Score=60.44 Aligned_cols=101 Identities=14% Similarity=0.105 Sum_probs=57.5
Q ss_pred CchhHHHHHHHHhhhhhhHhHHhhHHHH---hh--hcCChHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchhhhhhhh
Q 016374 104 AERSRSLALVYSGMYLGSVTGLAFSPFL---IH--RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIV 178 (390)
Q Consensus 104 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l---~~--~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (390)
|+|+........+.++|.++....--.- .+ .-.|++.+.+.+++.++.+++..++-.|-....++ +++++.
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~-~k~~k~--- 77 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPK-EKQEKE--- 77 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc-cccccc---
Confidence 5677777777788888887764332111 11 23499999998888877766555553321111111 111100
Q ss_pred hcccCCCCCCcchhhhhhcCchhHHHHHHHHHHH
Q 016374 179 SSCASKEPVKTIPWGLILSKPPVWALIVSHFCHN 212 (390)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (390)
+.+..++....+.+|++..|...+.+...-
T Consensus 78 ----~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wL 107 (267)
T PF07672_consen 78 ----NSTLSKKPSYKSILKEKETWKWILIYGIWL 107 (267)
T ss_pred ----cccccccchHHHHHccchHHHHHHHHHHHh
Confidence 011112456778999999887776665443
No 266
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.05 E-value=1.9e-06 Score=76.49 Aligned_cols=128 Identities=13% Similarity=0.060 Sum_probs=99.9
Q ss_pred HHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhh----HHHHH----HHHHHHhhccccchhhhhHHhhhcccC
Q 016374 32 LTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLG----LPFLL----VVRVFMGIGEGVAMPAMNNILSKWVPV 103 (390)
Q Consensus 32 ~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~----~~~l~----~~r~l~G~~~~~~~~~~~~~i~~~~~~ 103 (390)
.+-.+...+.|++|||++.+.+.+++++..+..+... | -..++ +..++.-+| .......+-+|.+|.
T Consensus 363 PGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y--~~~~~~~Gf~v~y~l~~ff~NFG---Pn~ttfivpaE~FPa 437 (538)
T KOG0252|consen 363 PGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPY--NQLENTIGFVVLYSLTFFFGNFG---PNATTFIVPAEIFPA 437 (538)
T ss_pred CceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCc--ccccccCceeehHHHHHHHHhcC---CCceeEEeehhhchH
Confidence 3666777889999999999999999999999888776 4 12222 233333333 234455667899999
Q ss_pred CchhHHHHHHHHhhhhhhHhHHhhHHHHhh-----hcCChHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 016374 104 AERSRSLALVYSGMYLGSVTGLAFSPFLIH-----RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAE 165 (390)
Q Consensus 104 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-----~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 165 (390)
+-|+..-|+..+..-.|.++|...-.++.+ ..+.|+++++.+..+++..+..+++ ||+..+
T Consensus 438 rvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~-pEtk~~ 503 (538)
T KOG0252|consen 438 RVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI-PETKGK 503 (538)
T ss_pred HHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe-eccccc
Confidence 999999999999999999999999999988 7789999999999888877655544 566544
No 267
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.98 E-value=0.00017 Score=65.90 Aligned_cols=177 Identities=15% Similarity=0.080 Sum_probs=105.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhhchHHHHhH-hcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHh-cCCchhHHHHHHH
Q 016374 200 PVWALIVSHFCHNWGTFILLTWMPTYYNQ-VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVS-KGLSVTTVRKIMQ 277 (390)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~-~~~~~~~~~~~~~ 277 (390)
.++...+..++....+.....-.=.|+++ +.+-+.+..|+..+...++..++++..|+...|.++ |+.+..+ .
T Consensus 35 si~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s-----~ 109 (488)
T KOG2325|consen 35 SIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVS-----F 109 (488)
T ss_pred hHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHH-----H
Confidence 34455555555555555555555567776 346677788999999999999999999999999885 3222211 1
Q ss_pred HHHHHHHHHHHHHHhcCC-c-hHHHHHHHHHHhhhccccccccchh-ccccCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 016374 278 SIGFLGPAFFLTQLSHVD-S-PAMAVLCMACSQGTDAFSQSGLYSN-HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGY 354 (390)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~ 354 (390)
.+..++..+.+......+ . +.+.+.=++.|.+.+.. ...-.+ .....+++|.++.+..+....+|..+||.+...
T Consensus 110 ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~--a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~ 187 (488)
T KOG2325|consen 110 LIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF--AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLA 187 (488)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH--HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHH
Confidence 122222222212222222 2 22233334444443332 222223 333456788888888888788888888877654
Q ss_pred HHhc-------------CCchhHHHHHHHHHHHHHHHHHHhh
Q 016374 355 ILQH-------------GSWDDVFKVSVGLYLVGTAVWNLFS 383 (390)
Q Consensus 355 l~~~-------------~g~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
+... .-|..+-|++++..++..+...+..
T Consensus 188 f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f 229 (488)
T KOG2325|consen 188 FTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFF 229 (488)
T ss_pred HhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhhe
Confidence 4321 2366777888888888777666553
No 268
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.88 E-value=0.0016 Score=59.98 Aligned_cols=58 Identities=9% Similarity=0.079 Sum_probs=37.7
Q ss_pred CchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 016374 295 DSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAAT 352 (390)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~ 352 (390)
+.++..+...+++...+...........+.+++++|..+..+....-.+|-.+|..+.
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455556666666655555555555666778888888887777777877777653
No 269
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.86 E-value=0.00011 Score=62.08 Aligned_cols=317 Identities=12% Similarity=0.071 Sum_probs=168.9
Q ss_pred HHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhhhHHhh
Q 016374 19 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILS 98 (390)
Q Consensus 19 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 98 (390)
.|.+.-+-.+...+..+....+.||+---.=..+..++.+.+..+.++++ +.++=+++-.+..++.|.....-.++-+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~--s~~~sL~GV~~aSissGlGEiTFL~lss 141 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSN--SVPMSLLGVVFASISSGLGEITFLALSS 141 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEecc--chhHHHhhhhhhhhcCCcceeehhhhhc
Confidence 45555666777778888888899985543334455667788888899999 8899899999999998877666555433
Q ss_pred hcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhh--cCChHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC-chhh--
Q 016374 99 KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQL-RPAE-- 173 (390)
Q Consensus 99 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 173 (390)
. +++ ...+.+..+.+.+.++|..--..+.+. .+-|...++...+.++.+...++.+++++...... ++..
T Consensus 142 ~-Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~ptl~~~~~~ 216 (409)
T KOG3880|consen 142 R-YPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYSPTLQPSTEI 216 (409)
T ss_pred c-CCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccCCCcCcccee
Confidence 3 322 334555666666677777666666663 45688888888777776666665555443322111 1111
Q ss_pred --hhhhhhcccCCC--CCCcchhhhhh-cCchhHHHHHHHHHHHHHHHHHhhchHHHHhH--hcCCcc---cchhhhhhH
Q 016374 174 --KKLIVSSCASKE--PVKTIPWGLIL-SKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ--VLHFNL---TESGLFCVL 243 (390)
Q Consensus 174 --~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~g~~~---~~~~~~~~~ 243 (390)
++....+..+++ +......++-+ +-+++...++-....++..+.++.-+...+.- ..|++. .|.-++...
T Consensus 217 ~~~~~~~~~a~e~~sv~s~~~~~~e~~~~i~pll~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRwyqvl 296 (409)
T KOG3880|consen 217 IPSQYLPFEAAEEKSVPSRRLGLKETLKRIKPLLKYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRWYQVL 296 (409)
T ss_pred ccCCCCcccccccccCchhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchhhhee
Confidence 100111111111 11111222211 12233334444444444444444332222111 123332 233455555
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHH--HHH-HHHHHHhcCCchHHHHHHHHH-Hhhhccccccccc
Q 016374 244 PWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL--GPA-FFLTQLSHVDSPAMAVLCMAC-SQGTDAFSQSGLY 319 (390)
Q Consensus 244 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 319 (390)
+.++..+++-- -|+-+-+ . ...+.+.-. ... ..-......+..+......+. |...+........
T Consensus 297 YQlGVFiSRSS-----~~~~~~p-~-----l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~ 365 (409)
T KOG3880|consen 297 YQLGVFISRSS-----INLFTMP-Y-----LWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFH 365 (409)
T ss_pred eeeeEEEEecc-----ceEEech-H-----HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHH
Confidence 55544433321 1111111 0 111111111 111 111223344555555555444 5555555566667
Q ss_pred hhccccCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 016374 320 SNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATG 353 (390)
Q Consensus 320 ~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g 353 (390)
.+.++.+|++|-.+++.......+|..++..+.=
T Consensus 366 ~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 366 NIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred HHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 7788899999999999988888888777766653
No 270
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.85 E-value=0.00031 Score=62.81 Aligned_cols=150 Identities=9% Similarity=0.047 Sum_probs=86.3
Q ss_pred hhHHHHHHHHHHHHHH-HHHhhch--HHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHH
Q 016374 200 PVWALIVSHFCHNWGT-FILLTWM--PTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIM 276 (390)
Q Consensus 200 ~~~~~~~~~~~~~~~~-~~~~~~~--~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 276 (390)
+-|...+...+.++.+ .....|. ..+.++.+| +...+-+...++.+..++-.+.+.|+.||+|-|...
T Consensus 42 rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~-------- 112 (480)
T KOG2563|consen 42 RRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTAL-------- 112 (480)
T ss_pred hHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHH--------
Confidence 3344444444444443 2223333 345666677 666667788888899999999999999999998322
Q ss_pred HHHHHHHHHHH--HHHHhcC----CchH---HHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHH
Q 016374 277 QSIGFLGPAFF--LTQLSHV----DSPA---MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVF 347 (390)
Q Consensus 277 ~~~~~~~~~~~--~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i 347 (390)
.++...-++. +-..... +..+ ....-.+.+........-+.-....-.+|++|+.+..+..+...+|.++
T Consensus 113 -llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvav 191 (480)
T KOG2563|consen 113 -LLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAV 191 (480)
T ss_pred -HHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHH
Confidence 2222221111 1111111 1222 1122222222222222222233345567899999999999999999999
Q ss_pred HHHHHHHHHhcC
Q 016374 348 GTAATGYILQHG 359 (390)
Q Consensus 348 g~~i~g~l~~~~ 359 (390)
+..+.+.+..+.
T Consensus 192 g~llppilV~~~ 203 (480)
T KOG2563|consen 192 GFLLPPILVPSS 203 (480)
T ss_pred HhhccceecCCC
Confidence 988888887653
No 271
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.55 E-value=0.0075 Score=53.85 Aligned_cols=133 Identities=10% Similarity=0.006 Sum_probs=61.8
Q ss_pred HHHHhhchHHHHhHhcCCc---ccchhhhhhH-hHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHH-
Q 016374 215 TFILLTWMPTYYNQVLHFN---LTESGLFCVL-PWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT- 289 (390)
Q Consensus 215 ~~~~~~~~~~~l~~~~g~~---~~~~~~~~~~-~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 289 (390)
+.......|-+..+..+-+ ....-..... +++...+|.....+.-++-. |+.. .....=......+.
T Consensus 259 y~VTLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~-r~l~-------i~v~lR~lfiPlF~~ 330 (406)
T KOG1479|consen 259 YFVTLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPDP-RKLT-------IPVLLRLLFIPLFLL 330 (406)
T ss_pred eeeeeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCCC-ceeh-------HHHHHHHHHHHHHHH
Confidence 3444556777777654322 2223333444 66777788666666644432 2221 11111111111111
Q ss_pred H------HhcCCchHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016374 290 Q------LSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL 356 (390)
Q Consensus 290 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~ 356 (390)
. ....+..+......+++...+-.....+....+.++|+++-.+-.+. .+...++.....+.+++.
T Consensus 331 cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m-~~fl~~Gl~~G~~~s~l~ 402 (406)
T KOG1479|consen 331 CNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLM-VFFLVGGLALGSLLSWVF 402 (406)
T ss_pred hccCCCCceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHH-HHHHHHHHHHhhHHHHHH
Confidence 1 11334555556666666666555444444445555565555544444 444444444444444443
No 272
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.53 E-value=0.00097 Score=61.64 Aligned_cols=155 Identities=19% Similarity=0.165 Sum_probs=92.2
Q ss_pred chHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHH---hcCCchhHHHHHHHHHHHHHH---HHHHHHHhc-
Q 016374 221 WMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV---SKGLSVTTVRKIMQSIGFLGP---AFFLTQLSH- 293 (390)
Q Consensus 221 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~- 293 (390)
-...++++.+|.++.+...+.....+.. ...++.|.++|-+. +||. ..+.++.+.. ...+...+.
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~-------~Y~~i~~~~~~~~~~~~~~~~~~ 82 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRK-------PYMIIGWLLGAVSALVLALLPAS 82 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcch-------HHHHHHHHHHHHHHHHHHhcccc
Confidence 3446778889999998877666655444 34668899999874 2321 2222222222 122222222
Q ss_pred CCchHHHHHHHHHHhhhccccccccchhcccc---CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHH
Q 016374 294 VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDI---APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVG 370 (390)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~ 370 (390)
..+......+.++.................|. .|+.+|...+.......+|+.++..+.|.+.+..+++..|.+.+.
T Consensus 83 ~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~ 162 (433)
T PF03092_consen 83 ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAA 162 (433)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHH
Confidence 12222222222222222223333333222222 234488889999999999999999999999999999999988887
Q ss_pred HHHHHHHHHHHhh
Q 016374 371 LYLVGTAVWNLFS 383 (390)
Q Consensus 371 ~~~~~~~~~~~~~ 383 (390)
+..+..+..+...
T Consensus 163 ~~~l~~~~~~~~~ 175 (433)
T PF03092_consen 163 LPLLMLIVALFLL 175 (433)
T ss_pred HHHHHHHHHHHhh
Confidence 7777665544443
No 273
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.49 E-value=0.011 Score=54.01 Aligned_cols=181 Identities=14% Similarity=0.097 Sum_probs=115.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 016374 200 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI 279 (390)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 279 (390)
..+.+....++..+..-...+-.|.++.+.+.-+..-.+.+...-.+..++.+...|...||..|.+.........-..+
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSV 82 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHH
Confidence 44567888889999999999999999999866666666666677778888899999999999998876655432222222
Q ss_pred HHHHHHHHHHHHhcCC---chHHH----HHHHHHHhhhccccccccchhcc-------ccCCCcchhHHHHHHHHHHHHH
Q 016374 280 GFLGPAFFLTQLSHVD---SPAMA----VLCMACSQGTDAFSQSGLYSNHQ-------DIAPRYSGVLLGLSNTAGVLAG 345 (390)
Q Consensus 280 ~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~g~~~~~~~~g~ 345 (390)
......+......... +.+.. .....++.............+.+ +-.++.....++...-+-....
T Consensus 83 ~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ck 162 (432)
T PF06963_consen 83 AASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCK 162 (432)
T ss_pred HHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHH
Confidence 2222222222222111 11111 11112222111111111111111 2234567788888888888899
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Q 016374 346 VFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN 380 (390)
Q Consensus 346 ~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 380 (390)
.++|.+.|.+.+..++.....+.++..+++...=+
T Consensus 163 llaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy 197 (432)
T PF06963_consen 163 LLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEY 197 (432)
T ss_pred HHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888888888888876543
No 274
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.29 E-value=0.016 Score=44.87 Aligned_cols=110 Identities=15% Similarity=0.055 Sum_probs=72.4
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhcccccccc
Q 016374 239 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGL 318 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (390)
.-.++......++.++.+.+.+++|.| ..+.++.+............+.+..+....+.|.+.+.......
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K---------~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg 111 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPK---------WSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQG 111 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhH---------HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhh
Confidence 335556677788888999999999998 44445555444444444344445555666666666665544444
Q ss_pred chhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016374 319 YSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 357 (390)
Q Consensus 319 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~ 357 (390)
..+.+...++.+++..++.-.+.+.+..+|..+.-.+.+
T Consensus 112 ~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 112 TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444444445788999999888888888888877655543
No 275
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.25 E-value=0.015 Score=52.33 Aligned_cols=162 Identities=9% Similarity=-0.050 Sum_probs=98.7
Q ss_pred HHHHhhchHHHHhHh-cCCcccchhhhhhHhHH-HHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 016374 215 TFILLTWMPTYYNQV-LHFNLTESGLFCVLPWL-TMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS 292 (390)
Q Consensus 215 ~~~~~~~~~~~l~~~-~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (390)
+-....++..|+.+. +|++..+...-.-+... ..+...+....+.|..+.|+. +.+..+........+.
T Consensus 19 frPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpv---------iil~~~~~i~t~~lll 89 (412)
T PF01770_consen 19 FRPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPV---------IILQALSYIITWLLLL 89 (412)
T ss_pred cCCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHH---------HHHHHHHHHHHHHHHH
Confidence 444577888899887 89988887544333332 445555667889999998842 2222222222222222
Q ss_pred cCCchHHH-HHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCchhHHHHHH
Q 016374 293 HVDSPAMA-VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH--GSWDDVFKVSV 369 (390)
Q Consensus 293 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~--~g~~~~~~~~~ 369 (390)
..++...+ +.-++.|..... -..-...+-..+++++--++.+........|..++..++-.+... .+|.....+..
T Consensus 90 ~~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl 168 (412)
T PF01770_consen 90 FGTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISL 168 (412)
T ss_pred HHCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 22333333 333333333332 112222233556777778889999999999999999988887774 66777777887
Q ss_pred HHHHHHHHHHHHhhcCC
Q 016374 370 GLYLVGTAVWNLFSTGE 386 (390)
Q Consensus 370 ~~~~~~~~~~~~~~~~~ 386 (390)
....++.+..+++.+.+
T Consensus 169 ~~~~~a~~~~~fLP~~~ 185 (412)
T PF01770_consen 169 ASVSLALLIALFLPMPK 185 (412)
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 77777777766665443
No 276
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.23 E-value=0.16 Score=46.55 Aligned_cols=255 Identities=8% Similarity=0.000 Sum_probs=144.0
Q ss_pred cccccCc---CcchHHHHHHHHHH-HHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh-------h-----
Q 016374 8 MSAEFNW---NPATVGLIQSSFFW-GYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL-------G----- 71 (390)
Q Consensus 8 i~~~~~~---s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~-------~----- 71 (390)
+.+.+.+ +++.+.++-+..-+ +..+..++.+++.+++.|++++-.....+....+++++.-.+ +
T Consensus 49 lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~ 128 (509)
T COG3202 49 LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSR 128 (509)
T ss_pred hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHH
Confidence 3444433 45667888888888 777889999999999999999888777777777777653200 0
Q ss_pred ------------------HHHHHHHHHHHhhccccchh-hhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHh
Q 016374 72 ------------------LPFLLVVRVFMGIGEGVAMP-AMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI 132 (390)
Q Consensus 72 ------------------~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 132 (390)
.|..-+.-.+.-+=.+.... .-.....|.+..+|-.|..++++.+.+++..++..+..++.
T Consensus 129 ~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~ 208 (509)
T COG3202 129 DLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLS 208 (509)
T ss_pred HHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 02222222222211111112 34456788888889999999999999999999988888877
Q ss_pred hhc-C---------ChHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhH
Q 016374 133 HRF-G---------WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVW 202 (390)
Q Consensus 133 ~~~-g---------w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (390)
++- . -+..+.+.+..+++...+..+.-+...++ +....+..+ .++.+..+-.-..+.+.+.|+|.++
T Consensus 209 k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~-~~f~~~~~~--kk~~~k~k~~~~~s~k~i~~SkyL~ 285 (509)
T COG3202 209 KHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTD-PLFYLRAKK--KKKKKKLKLGLIESFKMILRSKYLG 285 (509)
T ss_pred hchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccC-cchhHHHhc--ccccccccCcHHHHHHHHHhhhHHH
Confidence 631 1 23444445545444443333332222211 111000000 0000001111133566678888888
Q ss_pred HHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccch---hhhhhHhHHH-HHHHHHHHHHHHHHHHhc
Q 016374 203 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTES---GLFCVLPWLT-MAFSANLGGWIADTLVSK 265 (390)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~---~~~~~~~~~~-~~~~~~~~g~l~d~~~~~ 265 (390)
.+.+...+.+.+.+.+....-.-.++.+..+.+.. +.+....++. .++....++.+.+|.|=.
T Consensus 286 ~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~ 352 (509)
T COG3202 286 AIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWF 352 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHH
Confidence 88888777777777665544433343232222222 2333334444 344455567777777643
No 277
>PRK03612 spermidine synthase; Provisional
Probab=97.04 E-value=0.036 Score=52.46 Aligned_cols=166 Identities=15% Similarity=0.092 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Q 016374 204 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG 283 (390)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 283 (390)
+.+..++..++.........-.+...+|.+..+.+.+.+.+..+..+|+.+++++.++..++. . ..-..+++..
T Consensus 19 l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~-~-----~~e~~i~l~~ 92 (521)
T PRK03612 19 LLAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF-V-----AVELLLALLG 92 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH-H-----HHHHHHHHHH
Confidence 344445566666666666666777778888888888888888888888888877764333221 0 0111111111
Q ss_pred --HH-HHHHHHhcCCch-H-HHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh-
Q 016374 284 --PA-FFLTQLSHVDSP-A-MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ- 357 (390)
Q Consensus 284 --~~-~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~- 357 (390)
.. +........... . .....+..++..++. .|...-.......++.+...|-......+|+.+|+.+.+++.-
T Consensus 93 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~-~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp 171 (521)
T PRK03612 93 GLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGME-IPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLP 171 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHH
Confidence 11 111111111111 1 111222223333332 3333333333223345677888899999999999999987654
Q ss_pred cCCchhHHHHHHHHHHHHH
Q 016374 358 HGSWDDVFKVSVGLYLVGT 376 (390)
Q Consensus 358 ~~g~~~~~~~~~~~~~~~~ 376 (390)
..|.....+..+.+.++..
T Consensus 172 ~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 172 RLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred hcchHHHHHHHHHHHHHHH
Confidence 5776655555544444443
No 278
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.93 E-value=0.047 Score=50.67 Aligned_cols=149 Identities=13% Similarity=0.019 Sum_probs=82.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCC-----cccchhhhhhHhHHHHHHH-HHHHHHHHHHHHhcCCchhHHH
Q 016374 200 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF-----NLTESGLFCVLPWLTMAFS-ANLGGWIADTLVSKGLSVTTVR 273 (390)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~-----~~~~~~~~~~~~~~~~~~~-~~~~g~l~d~~~~~~~~~~~~~ 273 (390)
++....+..++..+.++. ---++|.... +.+....+.+...+...+. .++.+++++|++|++......
T Consensus 8 k~~~~~l~fF~il~~Y~i-----LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~- 81 (472)
T TIGR00769 8 KFLPLFLMFFCILFNYTI-----LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVI- 81 (472)
T ss_pred HHHHHHHHHHHHHHHHHH-----HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHH-
Confidence 444444444444444332 2334555544 2345555555554544444 788899999999996654321
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCc--------------------------hHHHHHHHHHHhhhcccccc-ccchhccccC
Q 016374 274 KIMQSIGFLGPAFFLTQLSHVDS--------------------------PAMAVLCMACSQGTDAFSQS-GLYSNHQDIA 326 (390)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 326 (390)
......+.+.+ ....+..+. .|......+..-..+....+ ..+...+|..
T Consensus 82 -~~F~~~f~lF~--~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~ 158 (472)
T TIGR00769 82 -SPFLGFFALFA--FVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQIT 158 (472)
T ss_pred -HHHHHHHHHHH--HHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 11111111111 111111111 12222233333333334444 5556666666
Q ss_pred C-CcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016374 327 P-RYSGVLLGLSNTAGVLAGVFGTAATGYILQ 357 (390)
Q Consensus 327 ~-~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~ 357 (390)
+ ++..+-.++.....++|..+++.+..++.+
T Consensus 159 t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 159 TIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 788999999999999999999999988874
No 279
>PRK03612 spermidine synthase; Provisional
Probab=96.80 E-value=0.047 Score=51.67 Aligned_cols=139 Identities=16% Similarity=0.173 Sum_probs=82.4
Q ss_pred ccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHH-HHHHHH-HHHHHh----hhhhhhhH-HHHHHHHHHHh
Q 016374 11 EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGF-GVVWWS-IATALT----PVAAKLGL-PFLLVVRVFMG 83 (390)
Q Consensus 11 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~-~~~~~~-~~~~~~----~~~~~~~~-~~l~~~r~l~G 83 (390)
-+|-+....+.+.+++..+.++|+.+.+++.++--|+...+- ...+.+ ++..+. ++.. .. ..++..-++.+
T Consensus 44 ~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~--~~~~~~~~~~~~~~ 121 (521)
T PRK03612 44 LLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQG--LSRLLLYVLVLLIG 121 (521)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 356677788999999999999999999988755433332211 111111 111111 1111 11 12233345666
Q ss_pred hccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHh-hhcCChHHHHHHHHHHHHHH
Q 016374 84 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI-HRFGWPSVFYSFGSLGTVWF 152 (390)
Q Consensus 84 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~gw~~~f~~~~~~~~~~~ 152 (390)
+..|+..|....+..+.. .++-++..|.......+|.++|.++.+++. +.+|-....++.+.+.++..
T Consensus 122 ~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 122 LLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred HHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 777777777666555432 234567788889999999999998877654 46775444444444444433
No 280
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.71 E-value=0.015 Score=39.50 Aligned_cols=53 Identities=15% Similarity=0.241 Sum_probs=45.3
Q ss_pred HHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhc
Q 016374 212 NWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 265 (390)
Q Consensus 212 ~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 265 (390)
..+.+.+...+|...+| .++|..+.+++.+.+.++..+|.+...++.++.+++
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~ 57 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR 57 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH
Confidence 44567777888888888 699999999999999999999999999998875555
No 281
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.52 E-value=0.1 Score=45.24 Aligned_cols=151 Identities=18% Similarity=0.189 Sum_probs=84.7
Q ss_pred HHHHHHhhchHHHHhHhcCCcc--cchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHH
Q 016374 213 WGTFILLTWMPTYYNQVLHFNL--TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ 290 (390)
Q Consensus 213 ~~~~~~~~~~~~~l~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (390)
..........+.+..+ .+.+. ...+.......+...++.+..|++.||.|||+... ..............
T Consensus 16 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~-------~~~~~~~~~~~~~~ 87 (338)
T COG0477 16 LDLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLI-------IGLLLFLLGTLLLA 87 (338)
T ss_pred HhcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHH-------HHHHHHHHHHHHHH
Confidence 3344444556666666 34444 46778888888888898899999999998873222 11111111111111
Q ss_pred HhcCCchHHHHHHHH-HHhhhccccccccchhccccCC--CcchhHHHHHHH-HHHHHHHHHHHHHHHHHhc--CCchhH
Q 016374 291 LSHVDSPAMAVLCMA-CSQGTDAFSQSGLYSNHQDIAP--RYSGVLLGLSNT-AGVLAGVFGTAATGYILQH--GSWDDV 364 (390)
Q Consensus 291 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~-~~~~g~~ig~~i~g~l~~~--~g~~~~ 364 (390)
............... .+.+.+.. .+.......+..| ++++...+.... ....+..++|.+.+.+.+. .+|+..
T Consensus 88 ~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T COG0477 88 LAPNVGLALLLILRLLQGLGGGGL-LPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAA 166 (338)
T ss_pred hCccchHHHHHHHHHHHHhhhHHH-HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH
Confidence 111112233322222 33443322 3333344444444 478888888888 5778888888777777665 556665
Q ss_pred HHHHHHHH
Q 016374 365 FKVSVGLY 372 (390)
Q Consensus 365 ~~~~~~~~ 372 (390)
+.......
T Consensus 167 ~~~~~~~~ 174 (338)
T COG0477 167 FLLAALLG 174 (338)
T ss_pred HHHHHHHH
Confidence 55544444
No 282
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.70 E-value=0.16 Score=46.86 Aligned_cols=103 Identities=17% Similarity=0.237 Sum_probs=77.3
Q ss_pred HHHHHHHHHhhHHhhh---hhhhHHHHHHHHHHHHHHHHHhhhhhhh----------------hHHHHHHHHHHHhhccc
Q 016374 27 FWGYLLTQIAGGIWAD---TVGGKAVLGFGVVWWSIATALTPVAAKL----------------GLPFLLVVRVFMGIGEG 87 (390)
Q Consensus 27 ~~~~~~~~~~~g~l~d---r~Grr~~l~~~~~~~~~~~~~~~~~~~~----------------~~~~l~~~r~l~G~~~~ 87 (390)
.++..++..+.+.+.+ |+||++.+..+..+..++.++.-..... ++...++.-++.|++.+
T Consensus 289 g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~ 368 (461)
T KOG3098|consen 289 GLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDA 368 (461)
T ss_pred hHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHH
Confidence 3344444555566654 5889999999998888888776543211 34566777899999999
Q ss_pred cchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHH
Q 016374 88 VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF 130 (390)
Q Consensus 88 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 130 (390)
......+.++.+.. +++|..+.++...-..++..++......
T Consensus 369 ~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 369 CFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 99999999999999 8899999999988888888776555443
No 283
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.57 E-value=0.13 Score=46.53 Aligned_cols=114 Identities=15% Similarity=0.085 Sum_probs=80.0
Q ss_pred cchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHH---HHHhhhhhhhhHHHHHHHHHHHhhccccchhh
Q 016374 16 PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA---TALTPVAAKLGLPFLLVVRVFMGIGEGVAMPA 92 (390)
Q Consensus 16 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~---~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 92 (390)
.++..+....|.+|-.++.--...+ |+.+-+++.+-..+..+. ....-+.+ +.|..++.-+..|+..|..+.-
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fip--si~ivf~lif~eGLlGGa~YVN 355 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIP--SIWIVFVLIFYEGLLGGASYVN 355 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHhhhHHHHH
Confidence 4566777777777666554332221 332222222222222222 22334556 7888889999999999999999
Q ss_pred hhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhh
Q 016374 93 MNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 133 (390)
Q Consensus 93 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 133 (390)
....+.|-.|+++|..+++....+-+.|..++..++-.+-+
T Consensus 356 tF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 356 TFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988876654
No 284
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.31 E-value=0.036 Score=50.13 Aligned_cols=148 Identities=10% Similarity=-0.004 Sum_probs=89.0
Q ss_pred chhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHH----HHhcCCchhHHHH
Q 016374 199 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT----LVSKGLSVTTVRK 274 (390)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~~~~~~~~~~~~~ 274 (390)
+.........+...++...=..+.|+|+++ .|.+....+.+.....+.+.+-+++.|..+|| +||||......
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~-- 108 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAG-- 108 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccchHHHh--
Confidence 344555566667777888888999999999 69999999999998899999999999999996 67776543321
Q ss_pred HHHHHHHHHHHHHHHHH--------hcCC-c--hHHHHHHHHHHhhhcc-----ccccccchhccccCCCcchh-HHHHH
Q 016374 275 IMQSIGFLGPAFFLTQL--------SHVD-S--PAMAVLCMACSQGTDA-----FSQSGLYSNHQDIAPRYSGV-LLGLS 337 (390)
Q Consensus 275 ~~~~~~~~~~~~~~~~~--------~~~~-~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~g~~ 337 (390)
...+...+.+... .... . ....+...++++-.-- ...+.-........++++.+ +++..
T Consensus 109 ----s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f 184 (498)
T KOG0637|consen 109 ----SLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVF 184 (498)
T ss_pred ----hHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhH
Confidence 1111111111111 1111 1 1122333333332222 22222222233334444444 88888
Q ss_pred HHHHHHHHHHHHHHHH
Q 016374 338 NTAGVLAGVFGTAATG 353 (390)
Q Consensus 338 ~~~~~~g~~ig~~i~g 353 (390)
.....+|+.+|=...+
T Consensus 185 ~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 185 SFFMAVGNVLGYALGS 200 (498)
T ss_pred HHHHHhcceeeeeccc
Confidence 8888888888876665
No 285
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.94 E-value=0.78 Score=44.76 Aligned_cols=183 Identities=13% Similarity=0.055 Sum_probs=110.2
Q ss_pred chhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHH
Q 016374 199 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 278 (390)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 278 (390)
+.+..+.....+......++....-+-+++.++++..+.|++...+-++..+......+...|..|.+++..+. ..++
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~--~~m~ 173 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGL--VLMG 173 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeech--hHHH
Confidence 33443333333333333355555556677889999999999999999999999999999999998888777764 3333
Q ss_pred HHHHHHHHHHHHH--------h-------c---------------------------CCc--hHHH--HHHHHHHhhhcc
Q 016374 279 IGFLGPAFFLTQL--------S-------H---------------------------VDS--PAMA--VLCMACSQGTDA 312 (390)
Q Consensus 279 ~~~~~~~~~~~~~--------~-------~---------------------------~~~--~~~~--~~~~~~~~~~~~ 312 (390)
++.++.++--... . . .++ .+.+ ..-++.|.|...
T Consensus 174 lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tp 253 (735)
T KOG3626|consen 174 LGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATP 253 (735)
T ss_pred HHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCC
Confidence 3333332210000 0 0 001 1211 122233333333
Q ss_pred ccccccchhcccc-CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc-------------------CCchhHHHHHHHHH
Q 016374 313 FSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-------------------GSWDDVFKVSVGLY 372 (390)
Q Consensus 313 ~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~-------------------~g~~~~~~~~~~~~ 372 (390)
.. +.-..+.+|. .+++.+...|+..++..+|=++|=.+++.+.+. +.|...|++.+.+.
T Consensus 254 i~-tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~ 332 (735)
T KOG3626|consen 254 IF-TLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALL 332 (735)
T ss_pred Cc-cCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHH
Confidence 33 3333444444 446888899999988888888888888777643 12556677777777
Q ss_pred HHHHHHHHHhhc
Q 016374 373 LVGTAVWNLFST 384 (390)
Q Consensus 373 ~~~~~~~~~~~~ 384 (390)
++..+.++++.+
T Consensus 333 ~~~a~p~f~fPk 344 (735)
T KOG3626|consen 333 LFSAVPLFFFPK 344 (735)
T ss_pred HHHHHHHHhCcc
Confidence 777776666644
No 286
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=94.94 E-value=0.0051 Score=54.11 Aligned_cols=114 Identities=10% Similarity=0.011 Sum_probs=2.1
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHHH-HhcCCchhHHHHHHHHHHHHHHHHHH----HHHhcCCchHHHHHHHHHHhhhccc
Q 016374 239 LFCVLPWLTMAFSANLGGWIADTL-VSKGLSVTTVRKIMQSIGFLGPAFFL----TQLSHVDSPAMAVLCMACSQGTDAF 313 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (390)
..+..++++-.+|+.+..+..-+. .+|........+....-.+..+-.-- ......+.++.++...+++...+..
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 346678899999999887643221 22221111111111111111110000 0001123344444555566665555
Q ss_pred cccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 016374 314 SQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAAT 352 (390)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~ 352 (390)
....+....+.+++++|..+..+....-..|-.+|..+.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp -HHHH----------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555555666777777777777777777777776554
No 287
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.78 E-value=0.21 Score=45.28 Aligned_cols=87 Identities=11% Similarity=0.006 Sum_probs=67.5
Q ss_pred hHHHHHHHHHHhhhccccccccchhccccCC---CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 016374 297 PAMAVLCMACSQGTDAFSQSGLYSNHQDIAP---RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYL 373 (390)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~ 373 (390)
....+.+.++..|.+..=+.......+..++ +++.+.........++|..+++.+.+++.++.||...|.+.++..+
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~ 113 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGML 113 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHH
Confidence 3456666677777777666655555555544 3577788888999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh
Q 016374 374 VGTAVWNLFS 383 (390)
Q Consensus 374 ~~~~~~~~~~ 383 (390)
++.+.++.-+
T Consensus 114 ~~~~~f~~~~ 123 (372)
T PF00854_consen 114 LALIVFLSGR 123 (372)
T ss_dssp HHHHHHHCCC
T ss_pred HHHHHHHhCC
Confidence 9988766543
No 288
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.63 E-value=0.008 Score=57.03 Aligned_cols=143 Identities=10% Similarity=0.039 Sum_probs=1.1
Q ss_pred HHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 016374 213 WGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS 292 (390)
Q Consensus 213 ~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (390)
....++..-.-.-++++++++..++|.+.+..-++.++..++..+..+|.+|.|++..+. .+++++.++.++=-+...
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~--~~~~~g~~l~~lPhf~~~ 93 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGA--LLMGLGSLLFALPHFLSG 93 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecH--HHHHHHHHHHhccHhhcC
Confidence 444444444445667779999999999999999999999999999999877776655543 333333322221111000
Q ss_pred c---------------------------------------CCchHHHHHH-----HHHHhhhccccccccchhccccCCC
Q 016374 293 H---------------------------------------VDSPAMAVLC-----MACSQGTDAFSQSGLYSNHQDIAPR 328 (390)
Q Consensus 293 ~---------------------------------------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (390)
. .......... ++.|.+...........+-+.++++
T Consensus 94 ~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~ 173 (539)
T PF03137_consen 94 PYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKK 173 (539)
T ss_dssp ----------------------------------------------------------SSS-------------------
T ss_pred CCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccc
Confidence 0 0000011112 2333333333333333334555667
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016374 329 YSGVLLGLSNTAGVLAGVFGTAATGYILQ 357 (390)
Q Consensus 329 ~~~~~~g~~~~~~~~g~~ig~~i~g~l~~ 357 (390)
+.+...|+......+|-++|=.+++...+
T Consensus 174 ~splYiGi~~~~~~lGPa~Gf~lg~~~L~ 202 (539)
T PF03137_consen 174 NSPLYIGILYAMSILGPALGFLLGSFCLR 202 (539)
T ss_dssp -----------------------------
T ss_pred cCccchhhhhHHhhccHHHHHHHHHHHHh
Confidence 88888888888888888777777776653
No 289
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.79 E-value=3.8 Score=37.11 Aligned_cols=178 Identities=13% Similarity=0.035 Sum_probs=77.8
Q ss_pred chhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHH
Q 016374 199 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 278 (390)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 278 (390)
-.++..++...........+.+-.+.|.++..+.+. .........+.+.+...+...+.-|...|.....+.......
T Consensus 18 ~v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~ 95 (406)
T KOG1479|consen 18 LVYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIA 95 (406)
T ss_pred cHHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555566677777777777666545444 444444455555555555554444444442222211111111
Q ss_pred HHHHHHHHHHHHH-hcCC---chHHHHHHHHHHhhhccccccccchhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 016374 279 IGFLGPAFFLTQL-SHVD---SPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGY 354 (390)
Q Consensus 279 ~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~ 354 (390)
+.+ ...+.+... .... ..+..........+..+...........+.|+|.....++=.+.++.+-+.. ..+.-.
T Consensus 96 il~-i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqavm~G~a~aG~l~Sl~-~i~tka 173 (406)
T KOG1479|consen 96 ILF-IVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAVMSGQALAGTLTSLL-RILTKA 173 (406)
T ss_pred HHH-HHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHHHhcchhHhHHHHHH-HHHHHH
Confidence 111 111111110 1111 1222333333444445555666777778888876543332222222222111 122222
Q ss_pred HHhc--CCchhHHHHHHHHHHHHHHHHH
Q 016374 355 ILQH--GSWDDVFKVSVGLYLVGTAVWN 380 (390)
Q Consensus 355 l~~~--~g~~~~~~~~~~~~~~~~~~~~ 380 (390)
..+. .+-..-|.+..+..+++.+++.
T Consensus 174 ~~~~~~~sA~~yF~~s~~~~llC~i~y~ 201 (406)
T KOG1479|consen 174 AFSDSRTSALIYFITSTVILLLCFVLYL 201 (406)
T ss_pred hcCCCCceeehhHHHHHHHHHHHHHHHH
Confidence 2221 2333445555555566665555
No 290
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=92.86 E-value=0.98 Score=40.13 Aligned_cols=175 Identities=15% Similarity=0.078 Sum_probs=99.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHH
Q 016374 198 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ 277 (390)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 277 (390)
++....+.+.+++..+.--...+-...|+.+..|-+....+.....-+....+...+.|...|+..|.|.........-.
T Consensus 26 s~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNl 105 (503)
T KOG2601|consen 26 SSTVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNL 105 (503)
T ss_pred cceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccH
Confidence 34445566777778888878888888888886665666666666666667777777888899999998876654322222
Q ss_pred HHHHHHHHHHHHHHhcC-----CchHHHHHHHHHHhhhcccc----ccccch--------hccccCCCcchhHHHHHHHH
Q 016374 278 SIGFLGPAFFLTQLSHV-----DSPAMAVLCMACSQGTDAFS----QSGLYS--------NHQDIAPRYSGVLLGLSNTA 340 (390)
Q Consensus 278 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~----~~~~~~--------~~~~~~~~~~~~~~g~~~~~ 340 (390)
..+..+..+. ..+.+. +.++...+..+. ...+.+. ...... +.+.-+|+.....++.....
T Consensus 106 Sv~vagglvi-~~l~~~~~~~~t~pv~t~~lvLa-~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~i 183 (503)
T KOG2601|consen 106 SVIVAGGLVI-TLLVHKDLKSATSPVFTVCLVLA-NLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGI 183 (503)
T ss_pred HHHHHHHHHh-hheeecchhcccccHHHHHHHHH-HHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhh
Confidence 2222222222 222222 223322222221 1111111 111111 11222233444445777777
Q ss_pred HHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Q 016374 341 GVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLV 374 (390)
Q Consensus 341 ~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~ 374 (390)
-..-..+.|.+.|.+.+..+.+..-...++-..+
T Consensus 184 Dq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 184 DQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 7888999999999999998887655555544444
No 291
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=92.62 E-value=2.7 Score=35.46 Aligned_cols=40 Identities=3% Similarity=-0.331 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHhHhc----CCcccchhhhhhHh
Q 016374 205 IVSHFCHNWGTFILLTWMPTYYNQVL----HFNLTESGLFCVLP 244 (390)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~l~~~~----g~~~~~~~~~~~~~ 244 (390)
.+...+.....++.+..=..|.+|+. +-+.....+.++-.
T Consensus 184 G~~LAv~aGvlyGs~fvPv~Yi~~~~~~y~~as~~~ldYvFs~f 227 (254)
T PF07857_consen 184 GIILAVFAGVLYGSNFVPVIYIQDHPDIYPGASQNGLDYVFSHF 227 (254)
T ss_pred hHHHHHHHHHHHhcccchHHHHHhCccccCCCCCcchheeHHHH
Confidence 33334444556666666677888753 23444444444443
No 292
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=92.51 E-value=7.1 Score=37.66 Aligned_cols=177 Identities=12% Similarity=0.081 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhc-CCchhHHHHHHHHHHH
Q 016374 203 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK-GLSVTTVRKIMQSIGF 281 (390)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~-~~~~~~~~~~~~~~~~ 281 (390)
..+..-.+...+++++...+..|+.+.++.+...+.-.............+.+++++|.+--| +....+. .+..+++
T Consensus 41 ~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s--~i~~~G~ 118 (571)
T KOG1237|consen 41 FILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS--LISLLGL 118 (571)
T ss_pred HHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH--HHHHHHH
Confidence 344445556666777778888899998898887777777777777778888999999987544 2221111 1111111
Q ss_pred HHHHHHHHHHhc---------C----Cc------hHHHHHHHHHHhhhccccccccchhccccC---C-C--cchhHHHH
Q 016374 282 LGPAFFLTQLSH---------V----DS------PAMAVLCMACSQGTDAFSQSGLYSNHQDIA---P-R--YSGVLLGL 336 (390)
Q Consensus 282 ~~~~~~~~~~~~---------~----~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~--~~~~~~g~ 336 (390)
.+.......... . +. ......+.+...+.++.-+.....-.+..+ | + ....-+..
T Consensus 119 ~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW 198 (571)
T KOG1237|consen 119 FGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNW 198 (571)
T ss_pred HHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhH
Confidence 111111111100 0 10 112223333333444444443333333333 2 2 34467778
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH
Q 016374 337 SNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 381 (390)
Q Consensus 337 ~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 381 (390)
.....+.|..++..+.-+.-|..+|...|-+..++..++.++++.
T Consensus 199 ~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 199 FYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred HHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHc
Confidence 888889999999999988889999999999999999988877654
No 293
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=91.87 E-value=1.9 Score=38.66 Aligned_cols=68 Identities=13% Similarity=0.070 Sum_probs=41.4
Q ss_pred chhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHH-----HHHhcCCchh
Q 016374 199 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIAD-----TLVSKGLSVT 270 (390)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----~~~~~~~~~~ 270 (390)
+++..+...+........... .+|..++. .|.|-.+.+.......- .---++...++| |+||||....
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~GrrksWvv 103 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRFGRRKSWVV 103 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhhccccceee
Confidence 456666667777766655555 88988886 57776665544333221 112345556667 9999975443
No 294
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=91.41 E-value=9.5 Score=33.58 Aligned_cols=72 Identities=11% Similarity=0.155 Sum_probs=53.4
Q ss_pred HHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhhhHHhhhcc
Q 016374 27 FWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWV 101 (390)
Q Consensus 27 ~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 101 (390)
.+.-....++.+.+..++|-|+++.++.......-..- +-+ .+..++-.-...|++.+..+..--+++++..
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N-l~p--r~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN-LEP--RYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh-cch--hHHhhccHHHhhccccccccccCcceecHHH
Confidence 34445556666689999999999998887766543322 223 5788999999999999998887777776655
No 295
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=88.89 E-value=5.2 Score=35.83 Aligned_cols=126 Identities=14% Similarity=0.087 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHh------hhhhh----hhHHHHHHHHHHHh----hccccch
Q 016374 25 SFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT------PVAAK----LGLPFLLVVRVFMG----IGEGVAM 90 (390)
Q Consensus 25 ~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~------~~~~~----~~~~~l~~~r~l~G----~~~~~~~ 90 (390)
.-.....+..++.|...|+..|+|++...+.+--++...+ -+..+ .+++.+..+-.+.- ++-=...
T Consensus 71 vesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~ 150 (503)
T KOG2601|consen 71 VESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASL 150 (503)
T ss_pred HHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHh
Confidence 3444566778889999999999999887766543333322 22221 13444443333322 2211111
Q ss_pred hhhhHHhhhcc----cCCchhHHH---HHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHH
Q 016374 91 PAMNNILSKWV----PVAERSRSL---ALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 150 (390)
Q Consensus 91 ~~~~~~i~~~~----~~~~r~~~~---~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~ 150 (390)
......-.||. ..+.+.... +.....-..--.+.|.+.|.+.+..+-|..-...++-.++
T Consensus 151 A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 151 AGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 11112223443 334444444 5555555566788899988888877777654444444444
No 296
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=87.41 E-value=7.8 Score=33.08 Aligned_cols=134 Identities=13% Similarity=0.067 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHHHhhHHhhhhhhhH--HHHHHHHHHHHHHHHHhhh----hhh-hhHHHHHHHHHHHhhccccchh
Q 016374 19 VGLIQSSFFWGYLLTQIAGGIWADTVGGK--AVLGFGVVWWSIATALTPV----AAK-LGLPFLLVVRVFMGIGEGVAMP 91 (390)
Q Consensus 19 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~----~~~-~~~~~l~~~r~l~G~~~~~~~~ 91 (390)
-|.+.+.++++.++|+-+..++..|-..| ..+.+..++..+...+... +++ .+...=+++-.+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 48899999999999999999998875544 3455554444444333221 221 0112223333444455677899
Q ss_pred hhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhh--hcCChHHHHHHHHHHHHHHHH
Q 016374 92 AMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH--RFGWPSVFYSFGSLGTVWFTV 154 (390)
Q Consensus 92 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--~~gw~~~f~~~~~~~~~~~~~ 154 (390)
..+.+=+++.|++.|...+.++..-.++=..++-.- .-.+ ..+-|..|-++.+...+..+.
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLyn--lh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYN--LHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhhee--cccccCccccchhhhhhHHHHHHHHHH
Confidence 999999999999999999888766554432222110 0011 134567887777766665443
No 297
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=85.49 E-value=27 Score=33.37 Aligned_cols=28 Identities=14% Similarity=0.086 Sum_probs=16.1
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHhcCCch
Q 016374 242 VLPWLTMAFSANLGGWIADTLVSKGLSV 269 (390)
Q Consensus 242 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 269 (390)
..+.+.+.+++..++++...++.+++..
T Consensus 304 ~~y~~~~~iaGy~S~~~yk~~~g~~W~~ 331 (521)
T PF02990_consen 304 ILYALTSFIAGYVSARLYKSFGGKKWKK 331 (521)
T ss_pred HHHHHHhhHHHHHHHHHHHHcCCCceee
Confidence 3344555566666666666666665544
No 298
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=82.39 E-value=6 Score=34.46 Aligned_cols=76 Identities=12% Similarity=0.050 Sum_probs=60.4
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHh
Q 016374 55 VWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI 132 (390)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 132 (390)
+++.+...+..+.+ +++..++.-+.-|+-.|..++-..--+.+-.++++|..+++....+-++|..++..++-.+.
T Consensus 327 l~ff~~~a~~~ftp--si~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh 402 (409)
T KOG3880|consen 327 LLFFLLQAWYWFTP--SIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLH 402 (409)
T ss_pred HHHHHHHHHHHhcc--HHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccch
Confidence 33444455567778 88888888999998888888887777888788999999999999999999888877665443
No 299
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=82.29 E-value=1.5 Score=36.87 Aligned_cols=158 Identities=8% Similarity=0.010 Sum_probs=83.3
Q ss_pred cchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCc
Q 016374 189 TIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLS 268 (390)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 268 (390)
+.+|..-+++-.+....+.+.+.-...+.-..|+|.|..++++++.....++-.+..++...-+.+..-.- .-|+|+..
T Consensus 191 Rm~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eip-wngkrlKa 269 (412)
T KOG4830|consen 191 RMHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIP-WNGKRLKA 269 (412)
T ss_pred cccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCC-cCcceeee
Confidence 45566667777888888888988888888899999999988887766665554554444443333221110 11222111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhccccccccchhccccCC--CcchhHHHHHHHHHHHHHH
Q 016374 269 VTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP--RYSGVLLGLSNTAGVLAGV 346 (390)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~ 346 (390)
.. ..-.+.-+.++......+.........+..++|.................... +..+...|..+....+...
T Consensus 270 yY----saGgiiwifcga~ilLlpr~i~symyAisvfIGIAnAimlvtslsitavli~~~~~~~aFv~GamSF~DKlS~G 345 (412)
T KOG4830|consen 270 YY----SAGGIIWIFCGAVILLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLINKNTESGAFVYGAMSFFDKLSNG 345 (412)
T ss_pred ee----ecccHHHHHhhhheeecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCceEEEehHHHHHhhccc
Confidence 11 11111122222222333333344445555556655554433333322222222 4456666766666666555
Q ss_pred HHHHH
Q 016374 347 FGTAA 351 (390)
Q Consensus 347 ig~~i 351 (390)
++-.+
T Consensus 346 iA~~l 350 (412)
T KOG4830|consen 346 IAYQL 350 (412)
T ss_pred HHHHH
Confidence 55443
No 300
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=82.28 E-value=9.4 Score=35.51 Aligned_cols=61 Identities=18% Similarity=0.263 Sum_probs=52.4
Q ss_pred hHHHHHHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHH
Q 016374 71 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 131 (390)
Q Consensus 71 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 131 (390)
+-+..++..++.|+..|-....++.+..+..++++|..+-.+...+..+|..+|..++-.+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777799999999988888899999999999999999999999999999988776443
No 301
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.34 E-value=14 Score=26.21 Aligned_cols=42 Identities=12% Similarity=0.199 Sum_probs=31.6
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCchhHHHHH
Q 016374 327 PRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVS 368 (390)
Q Consensus 327 ~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~-~g~~~~~~~~ 368 (390)
++.++.+.++-...-.+++++-....||+.|+ .+-.+.+++.
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv 79 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIV 79 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 35678888888888899999999999999998 3333333333
No 302
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=77.69 E-value=19 Score=28.20 Aligned_cols=57 Identities=11% Similarity=0.088 Sum_probs=34.1
Q ss_pred hcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhc------CChHHHHHHHHHHHHHHHHH
Q 016374 99 KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF------GWPSVFYSFGSLGTVWFTVW 155 (390)
Q Consensus 99 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------gw~~~f~~~~~~~~~~~~~~ 155 (390)
...|.++|.+..+.+.++.-.+...--.+=+.+.+.. .+...+++.++.+.+.++..
T Consensus 13 ~~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mv 75 (166)
T PF05255_consen 13 PWFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMV 75 (166)
T ss_pred CCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHh
Confidence 3455566666666666655555444444444443322 47778888888888776544
No 303
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=76.62 E-value=12 Score=33.37 Aligned_cols=95 Identities=6% Similarity=-0.085 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHhhhhhhhHHH--HHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhccccchhhhhHHh
Q 016374 20 GLIQSSFFWGYLLTQIAGGIWADTVGGKAV--LGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNIL 97 (390)
Q Consensus 20 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~--l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 97 (390)
|..-++..+..+++.+..|++--++.|..- +..+.+.-+...+++..++ +.|..+++-++.+.-.....+.+..-+
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~--~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQ--HIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhccc--ceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 566677788888999999999888777633 4445555555556667777 888888887777777777777787888
Q ss_pred hhcccCCchhHHHHHHHHh
Q 016374 98 SKWVPVAERSRSLALVYSG 116 (390)
Q Consensus 98 ~~~~~~~~r~~~~~~~~~~ 116 (390)
++..+++.-|..+|+....
T Consensus 352 A~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTFV 370 (433)
T ss_pred HHhhhhhhheeeeehHHHH
Confidence 8888788888888876644
No 304
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=73.40 E-value=69 Score=28.75 Aligned_cols=55 Identities=13% Similarity=0.103 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHH
Q 016374 206 VSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIAD 260 (390)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 260 (390)
++.+.+..+.......+........|-+..+.+.+.+.+-...-+|+.+.-++.|
T Consensus 14 laVf~~aa~GlvyElal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~d 68 (508)
T COG4262 14 LAVFVCAACGLVYELALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLD 68 (508)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccC
Confidence 3333344344444444444444445666677777766666666666665555444
No 305
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=73.30 E-value=50 Score=27.05 Aligned_cols=38 Identities=24% Similarity=0.324 Sum_probs=23.6
Q ss_pred CCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHH
Q 016374 103 VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSV 140 (390)
Q Consensus 103 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 140 (390)
+|++.+.-.......-++..+|..+++.+.+..+.+..
T Consensus 157 ~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~al 194 (209)
T PF06912_consen 157 GKDRALRRALRYLLIILSFFIGAILGALLYRRLGFWAL 194 (209)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 34443344455566666777777778888887775433
No 306
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=67.91 E-value=90 Score=27.83 Aligned_cols=60 Identities=17% Similarity=0.064 Sum_probs=31.0
Q ss_pred chhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhc
Q 016374 199 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 265 (390)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 265 (390)
++++.+.....+.+..+.+..... ..... +......+ .....-+.+.++.+.+.+++|-|
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nlq-~~vn~--~lg~~sl~----~~y~~l~~s~m~~~~~Ir~~g~K 88 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNLQ-TSVNY--DLGTVSLG----ALYLSLIDSSMFMPLLIRFLGTK 88 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHH-HHHhc--Ccccchhh----hhhHHHHHHHHHHHHHHHHHhhH
Confidence 355555555555555555543322 22221 22222222 23344556666677899999988
No 307
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=64.66 E-value=1.2e+02 Score=28.22 Aligned_cols=44 Identities=14% Similarity=-0.004 Sum_probs=29.3
Q ss_pred cCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHH
Q 016374 102 PVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 150 (390)
Q Consensus 102 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~ 150 (390)
.+++.+...++...+.+.|.+.-|...+. +|-++..+..+++..
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g~-----~Gf~p~lillll~~p 61 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAGF-----GGLIPILLMLVLAYP 61 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHhc-----chHHHHHHHHHHHHH
Confidence 35677888888888888888888876654 344555544444433
No 308
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=62.31 E-value=2.9 Score=36.85 Aligned_cols=105 Identities=11% Similarity=0.024 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHhhHHhhhhh-hhHHHHHHHHHHHH---HHHHHhh----------hhhhhhHHHHHHHHHHHhhccc
Q 016374 22 IQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGVVWWS---IATALTP----------VAAKLGLPFLLVVRVFMGIGEG 87 (390)
Q Consensus 22 ~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~---~~~~~~~----------~~~~~~~~~l~~~r~l~G~~~~ 87 (390)
....+.++-.+|....++.-=+- .+|+.. ...+.-. -..++|- .-+ |-+..++.-++.|+..|
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~--~d~~~~i~~~l~g~TNG 263 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFN--SDAWFIILMLLFGFTNG 263 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCccc--chHHHHHHHHHHHHccc
Confidence 44577788888887776632111 244433 3322222 2222221 122 44667778899999999
Q ss_pred cchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHH
Q 016374 88 VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSP 129 (390)
Q Consensus 88 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 129 (390)
-.....+.+..+..++++|..+-.+...+...|..+|..++-
T Consensus 264 yl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 264 YLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp ---HHHH-----------------------------------
T ss_pred hhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988888888888888877653
No 309
>PF03706 UPF0104: Uncharacterised protein family (UPF0104); InterPro: IPR022791 This family of proteins are integral membrane proteins. These proteins are uncharacterised but contain a conserved PG motif. Some members of this family are annotated as dolichol-P-glucose synthetase and contain a PF00535 from PFAM domain. This entry also contains proteins of unknown function that are involved in the addition of lysine to phosphatidylglycerol (lysylphosphatidylglycerol synthetase, L-PG synthase). L-PG synthase produces lysyl-phosphatidylglycerol (L-PG), the major component of the bacterial membrane and responsible for its positive charge. L-PG synthesis contributes to bacterial virulence as it is involved in the cationic antimicrobial peptides (CAMP) resistance mechanism of the host's immune system (defensins, cathelicidins) and of the competing microorganisms (bacteriocins).
Probab=60.80 E-value=1.1e+02 Score=26.39 Aligned_cols=52 Identities=15% Similarity=0.050 Sum_probs=29.6
Q ss_pred CcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHh
Q 016374 13 NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 64 (390)
Q Consensus 13 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 64 (390)
+.+............+...+-..-+-.+.++.|.|..+.-..-....+....
T Consensus 23 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 74 (294)
T PF03706_consen 23 SANPWWLLLALLLSLLSYVLRALRWRLLLRRLGHRISFRDALRISFIGFFLN 74 (294)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence 3445555555566666677767777777777665554444444444444333
No 310
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=56.46 E-value=40 Score=24.04 Aligned_cols=37 Identities=19% Similarity=0.030 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHhhHHhhhhh-hhHHHHHHHHHH
Q 016374 20 GLIQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGVVW 56 (390)
Q Consensus 20 g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~ 56 (390)
..-.+.-.++..+.....||+.||| |-++.-++..++
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~ll 82 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLL 82 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 4445667778888888999999995 445544443333
No 311
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=55.29 E-value=1e+02 Score=26.07 Aligned_cols=25 Identities=24% Similarity=0.313 Sum_probs=15.0
Q ss_pred hHHHHHHHHhhhhhhHhHHhhHHHH
Q 016374 107 SRSLALVYSGMYLGSVTGLAFSPFL 131 (390)
Q Consensus 107 ~~~~~~~~~~~~~g~~~g~~~~~~l 131 (390)
.+.....-.+.-+|..+|...+..-
T Consensus 9 ~~~~~~illg~~iGg~~G~~~~~~~ 33 (248)
T PF11368_consen 9 LRFLLLILLGGLIGGFIGFFIGRIG 33 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666666666555444
No 312
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=54.56 E-value=27 Score=29.78 Aligned_cols=61 Identities=15% Similarity=0.223 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHH---------HHHHHHHhcCC
Q 016374 206 VSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGG---------WIADTLVSKGL 267 (390)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g---------~l~d~~~~~~~ 267 (390)
+..+..-.......+|+-.|+++. |.++.....++....+...+..++.| +-.||+|||+.
T Consensus 24 vGHmlNDitAScWFTYlllfltqi-glsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~ 93 (412)
T KOG4830|consen 24 VGHMLNDITASCWFTYLLLFLTQI-GLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMS 93 (412)
T ss_pred hhHHHhhHHHHHHHHHHHHHHHHh-cCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceee
Confidence 344455555666677888888885 99998888888888888888877764 45789998853
No 313
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=52.00 E-value=1.1e+02 Score=24.67 Aligned_cols=11 Identities=9% Similarity=0.392 Sum_probs=6.9
Q ss_pred HhhchHHHHhH
Q 016374 218 LLTWMPTYYNQ 228 (390)
Q Consensus 218 ~~~~~~~~l~~ 228 (390)
...|.|.+.+.
T Consensus 113 igIYiP~Fa~~ 123 (191)
T PF03596_consen 113 IGIYIPLFASL 123 (191)
T ss_pred EEEeehhhhcC
Confidence 45677777554
No 314
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=50.37 E-value=79 Score=24.41 Aligned_cols=82 Identities=17% Similarity=0.114 Sum_probs=47.0
Q ss_pred HhhhhhhhHHHHHHHHHHH-HHHHHHh--hhhh-----hhhHHHHHHHHHHHhhccccchhhhhHHhhhcccCCchhHHH
Q 016374 39 IWADTVGGKAVLGFGVVWW-SIATALT--PVAA-----KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSL 110 (390)
Q Consensus 39 ~l~dr~Grr~~l~~~~~~~-~~~~~~~--~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 110 (390)
.++||.-||..+..|.-.. +++.+.. .+.. -.++..++..-.+.|+| .....+..++.-.++++.|..+
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~g---llGisYGilSaSWD~~r~GSll 132 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLG---LLGISYGILSASWDPEREGSLL 132 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHH---HHhhhhhhcccccCCCCCCCcc
Confidence 4678887776655544222 1111111 1111 01344555555555554 3445666777788889899999
Q ss_pred HHHHHhhhhhhHh
Q 016374 111 ALVYSGMYLGSVT 123 (390)
Q Consensus 111 ~~~~~~~~~g~~~ 123 (390)
|+-..-.+++-+.
T Consensus 133 G~~e~~~N~~r~~ 145 (153)
T PF11947_consen 133 GWEEFKRNWGRMW 145 (153)
T ss_pred cHHHHHHhHHHHH
Confidence 9988888776543
No 315
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=49.99 E-value=1.4e+02 Score=24.23 Aligned_cols=35 Identities=17% Similarity=0.036 Sum_probs=26.6
Q ss_pred CCcccchhhhhhHhHHHHHHHHHHHHHHHHHHHhc
Q 016374 231 HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 265 (390)
Q Consensus 231 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 265 (390)
.-|+.+....+..++++.++.-...+...++.+++
T Consensus 146 s~s~~~G~l~m~~FgLGT~p~ll~~~~~~~~l~~~ 180 (199)
T PF13386_consen 146 SGSPLYGALLMLAFGLGTLPALLLAGLLAGKLSRR 180 (199)
T ss_pred cCChHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 33677777888888998888888888777776654
No 316
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=48.84 E-value=44 Score=23.83 Aligned_cols=53 Identities=17% Similarity=0.184 Sum_probs=42.8
Q ss_pred cchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhh
Q 016374 16 PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA 68 (390)
Q Consensus 16 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 68 (390)
++..|=..++|.-.+.+.++.+++..|+.-+.+-=.+|..+..++..+.-+.+
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 46678888999999999999999999998887777777777777766655544
No 317
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=47.37 E-value=2.5e+02 Score=26.50 Aligned_cols=27 Identities=4% Similarity=-0.111 Sum_probs=18.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016374 330 SGVLLGLSNTAGVLAGVFGTAATGYIL 356 (390)
Q Consensus 330 ~~~~~g~~~~~~~~g~~ig~~i~g~l~ 356 (390)
|-.+.-.++....++..+.|.-+..+.
T Consensus 403 ~q~~vla~q~g~gl~n~isPtsg~~m~ 429 (465)
T PF03606_consen 403 RQTAVLAFQFGDGLGNSISPTSGVLMA 429 (465)
T ss_pred HHHHHHHHHHHHHHHhhccchHHHHHH
Confidence 445555567788888888887665544
No 318
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=46.51 E-value=67 Score=24.79 Aligned_cols=27 Identities=19% Similarity=0.251 Sum_probs=19.4
Q ss_pred hccccCCCcchhHHHHHHHHHHHHHHH
Q 016374 321 NHQDIAPRYSGVLLGLSNTAGVLAGVF 347 (390)
Q Consensus 321 ~~~~~~~~~~~~~~g~~~~~~~~g~~i 347 (390)
....-.+++.|...|+-.+-.+++...
T Consensus 119 lSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 119 LSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred cccccCCCCCCCcccHHHHHHhHHHHH
Confidence 344456778899999988877776543
No 319
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=46.36 E-value=66 Score=30.55 Aligned_cols=31 Identities=16% Similarity=0.320 Sum_probs=17.8
Q ss_pred CcccchhhhhhHhHHHHHHHHHHHHHHHHHH
Q 016374 232 FNLTESGLFCVLPWLTMAFSANLGGWIADTL 262 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 262 (390)
.+|+.-|.+++..-+..++.++++|+.+.|.
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 4666666666655555555555555555543
No 320
>PRK10263 DNA translocase FtsK; Provisional
Probab=46.31 E-value=4.2e+02 Score=28.77 Aligned_cols=34 Identities=12% Similarity=0.058 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Q 016374 343 LAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT 376 (390)
Q Consensus 343 ~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~ 376 (390)
.|+++|..+...+....|.....++..++.++++
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LILLlllLIGL 175 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGL 175 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4677777777666666555444444444444443
No 321
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=45.99 E-value=91 Score=25.01 Aligned_cols=23 Identities=13% Similarity=0.494 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHhhHHhhhhhhh
Q 016374 24 SSFFWGYLLTQIAGGIWADTVGG 46 (390)
Q Consensus 24 s~~~~~~~~~~~~~g~l~dr~Gr 46 (390)
.-|.+++.+.+.+.|++.||.-+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 46888999999999999999875
No 322
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=45.92 E-value=27 Score=28.91 Aligned_cols=99 Identities=21% Similarity=0.282 Sum_probs=60.3
Q ss_pred cccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhc
Q 016374 6 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIG 85 (390)
Q Consensus 6 p~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 85 (390)
..+.|.+|.+..|--=..+.|..|..++.++.+.++.-+ ..+ +...=...-.-.|+|
T Consensus 128 aiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~-------------------a~~----~~fhP~ALAMasGvG 184 (241)
T PF11299_consen 128 AIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLL-------------------ASL----GIFHPYALAMASGVG 184 (241)
T ss_pred eeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHH-------------------Hhc----cCCCHHHHHHHcCCc
Confidence 345666777666655556777777777766665543211 111 111122333446888
Q ss_pred cccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhH
Q 016374 86 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS 128 (390)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 128 (390)
++..+.++..-+.+.+| +......++.....-+....|-...
T Consensus 185 SgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ 226 (241)
T PF11299_consen 185 SGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMS 226 (241)
T ss_pred HHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888884 6667777776666666655554443
No 323
>COG4769 Predicted membrane protein [Function unknown]
Probab=43.55 E-value=31 Score=26.75 Aligned_cols=53 Identities=11% Similarity=0.051 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhc
Q 016374 25 SFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIG 85 (390)
Q Consensus 25 ~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 85 (390)
++++...+.+...-++..++|+|..-+++... ..++.+ |..++.+.+++.+-.
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~h--Nl~QLivas~Lv~~~ 133 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTH--NLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHH--hHHHHHHHHHHHhcc
Confidence 45666667777778888899988875555432 346777 889999988887643
No 324
>PRK02237 hypothetical protein; Provisional
Probab=42.61 E-value=77 Score=22.69 Aligned_cols=52 Identities=15% Similarity=0.018 Sum_probs=41.2
Q ss_pred chHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhh
Q 016374 17 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA 68 (390)
Q Consensus 17 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 68 (390)
+..|=+.++|.-.+.+.++.+++..|+.-+-+-=.+|..+..++..+.-+.+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 4578888999999999999999999998877776677777777766555543
No 325
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=42.19 E-value=29 Score=21.52 Aligned_cols=25 Identities=16% Similarity=0.288 Sum_probs=18.5
Q ss_pred cCChHHHHHHHHHHHHHHHHHHhhc
Q 016374 135 FGWPSVFYSFGSLGTVWFTVWLSKA 159 (390)
Q Consensus 135 ~gw~~~f~~~~~~~~~~~~~~~~~~ 159 (390)
-|||....+.++++++.+.+.-...
T Consensus 3 rg~r~~~~~ggfVg~iG~a~Ypi~~ 27 (58)
T PF15061_consen 3 RGWRYALFVGGFVGLIGAALYPIYF 27 (58)
T ss_pred ccccchhhHHHHHHHHHHHHhhhhc
Confidence 3799999999988888765544443
No 326
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=42.07 E-value=39 Score=24.16 Aligned_cols=33 Identities=21% Similarity=0.145 Sum_probs=24.7
Q ss_pred HhhhcCChHHHHHHHHHHHHHHHHHHhhccCCC
Q 016374 131 LIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 163 (390)
Q Consensus 131 l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (390)
-.+..+|+.+|++...++++.+.+.+.+.||..
T Consensus 53 ~~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 53 KRDWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred cchHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 345678999999887788777777777777644
No 327
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=41.57 E-value=2.9e+02 Score=25.49 Aligned_cols=30 Identities=20% Similarity=0.259 Sum_probs=20.4
Q ss_pred CchhHHHHHHHHhhhhhhHhHHhhHHHHhh
Q 016374 104 AERSRSLALVYSGMYLGSVTGLAFSPFLIH 133 (390)
Q Consensus 104 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 133 (390)
.+|.+...+.....-.+..+-|++..+.-.
T Consensus 107 aeR~~~~~~ii~~~l~~~~vy~~~~~w~w~ 136 (399)
T PF00909_consen 107 AERIKFSAYIIFGFLWGGLVYPPLAHWVWG 136 (399)
T ss_dssp CCCCHHHHHHHHHHHCCCCTHHHHHHHHHC
T ss_pred eceeeehHHHHHHHHHhhhhccccceEEEe
Confidence 456777777777777777777776655443
No 328
>COG1288 Predicted membrane protein [Function unknown]
Probab=41.33 E-value=3e+02 Score=25.64 Aligned_cols=23 Identities=13% Similarity=0.274 Sum_probs=15.2
Q ss_pred HhhhcCChHHHHHHHHHHHHHHH
Q 016374 131 LIHRFGWPSVFYSFGSLGTVWFT 153 (390)
Q Consensus 131 l~~~~gw~~~f~~~~~~~~~~~~ 153 (390)
+.+-.+||...++......+..+
T Consensus 212 ~~sG~~~Riv~~v~~~~~~i~y~ 234 (481)
T COG1288 212 FLSGMGLRIVVWVVFTLISIIYV 234 (481)
T ss_pred ccccchHHHHHHHHHHHHHHHHH
Confidence 34456899998887766555443
No 329
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=39.99 E-value=3.7e+02 Score=26.28 Aligned_cols=30 Identities=27% Similarity=0.171 Sum_probs=16.9
Q ss_pred cccchhhhhhHhHHHHHHHHHHHHHHHHHH
Q 016374 233 NLTESGLFCVLPWLTMAFSANLGGWIADTL 262 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 262 (390)
++...+..+..++++..+--++.+....|.
T Consensus 323 ~~~~g~~~l~~~gLG~~~Plll~~~~~~~~ 352 (571)
T PRK00293 323 DLLLGGLTLYLLALGMGLPLILITTFGNKL 352 (571)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 444555666667777655555555545444
No 330
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=39.79 E-value=3.2e+02 Score=25.57 Aligned_cols=147 Identities=8% Similarity=-0.166 Sum_probs=71.8
Q ss_pred hhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhh-cCChHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCchhhhhh
Q 016374 98 SKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKL 176 (390)
Q Consensus 98 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (390)
.|..|+|+|-..........+.-..++....|.+... .+++...+....-.++..+.....--.-++..-++.
T Consensus 11 ~~~vp~~~r~~~~~~~~vWfga~~~ias~~~G~ll~~~L~~~~si~aillG~llG~i~~A~~s~~Ga~~Glpqm------ 84 (442)
T COG1457 11 IEPVPEESRKGWLNLFLVWFGANFTIASMVTGGLLVPGLSFGQSLLAILLGNLLGGIFMAYFSYQGARTGLPQM------ 84 (442)
T ss_pred CCCCChhhhhcchhHHHHHHHhHhHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhccccCCChh------
Confidence 4556777774444555555544444544444444332 566665554333333333332222222222111110
Q ss_pred hhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHH
Q 016374 177 IVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGG 256 (390)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g 256 (390)
..-|..+-++.-+...+.......+.++++.++.-.... .+ +...........++...+-.+++-
T Consensus 85 -------------i~sR~~fG~~Gs~l~sll~~~~~iGW~~v~~~l~~~a~~-~~-~~~~~~~~ili~g~l~~l~~ifG~ 149 (442)
T COG1457 85 -------------ILSRYPFGVKGSILPSLLNGITLIGWFGVNVILSGIAIG-SG-TGLPVWAGILIIGVLMTLVTIFGY 149 (442)
T ss_pred -------------eeecccccchhHHHHHHHHHHHHhhHHHHHHHHhccccc-cC-CCCcHHHHHHHHHHHHHHHHHHhH
Confidence 001112333333455555555566666666665444311 12 333344555666677777888888
Q ss_pred HHHHHHHhc
Q 016374 257 WIADTLVSK 265 (390)
Q Consensus 257 ~l~d~~~~~ 265 (390)
+..+++.|-
T Consensus 150 r~l~~l~~~ 158 (442)
T COG1457 150 RALHKLERI 158 (442)
T ss_pred HHHHHHHHH
Confidence 888888766
No 331
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=39.37 E-value=3.5e+02 Score=25.89 Aligned_cols=62 Identities=16% Similarity=0.146 Sum_probs=46.7
Q ss_pred HHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCCh
Q 016374 77 VVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 138 (390)
Q Consensus 77 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 138 (390)
+.-.+.-+.......+..+.-+++.+|.-=|..|.+.+...++|.---..+.-++.|.+.++
T Consensus 410 ~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~ 471 (544)
T PF13000_consen 410 IQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTVA 471 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcccc
Confidence 34566667666777888888899999999999999999999999765555555555554443
No 332
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=37.99 E-value=2.7e+02 Score=24.21 Aligned_cols=57 Identities=12% Similarity=0.077 Sum_probs=33.4
Q ss_pred HHHHHHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHh
Q 016374 75 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI 132 (390)
Q Consensus 75 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 132 (390)
.-..|.+.|+-. ......++++.-.+|++++--..--...+.+++.++-|++|-.+.
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455687777664 345668899999998655433333334444444455555554443
No 333
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=37.84 E-value=64 Score=21.87 Aligned_cols=20 Identities=0% Similarity=-0.097 Sum_probs=12.8
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 016374 138 PSVFYSFGSLGTVWFTVWLS 157 (390)
Q Consensus 138 ~~~f~~~~~~~~~~~~~~~~ 157 (390)
|+..++.+++-+++++.+.+
T Consensus 23 RYGLf~GAIFQliCilAiI~ 42 (85)
T PF06783_consen 23 RYGLFVGAIFQLICILAIIL 42 (85)
T ss_pred HHHHHHHHHHHHHHHHheee
Confidence 56666777777777654443
No 334
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=37.49 E-value=97 Score=18.86 Aligned_cols=37 Identities=19% Similarity=0.185 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHhhHHhhhh-hhhHHHHHHHHHHHHHH
Q 016374 24 SSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIA 60 (390)
Q Consensus 24 s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~ 60 (390)
........+.....|+..|+ +|.++...+..++.++.
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~ 44 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIA 44 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 34555566677778888885 77756554444444433
No 335
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=36.52 E-value=1.6e+02 Score=22.73 Aligned_cols=25 Identities=16% Similarity=0.419 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHhhHHhhhhhhhHH
Q 016374 24 SSFFWGYLLTQIAGGIWADTVGGKA 48 (390)
Q Consensus 24 s~~~~~~~~~~~~~g~l~dr~Grr~ 48 (390)
.-|.+++.+...+.|++.||..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 4688889999999999999988764
No 336
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=35.46 E-value=2.3e+02 Score=22.69 Aligned_cols=57 Identities=12% Similarity=0.213 Sum_probs=32.2
Q ss_pred ccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHH
Q 016374 87 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG 145 (390)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~ 145 (390)
+.-+....+++.+..|+++|.++.-+=..+..+--.+.-..+.++.+. |++..++.+
T Consensus 11 s~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~--~~~i~~igG 67 (183)
T PF03741_consen 11 SIDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI--FPWILLIGG 67 (183)
T ss_pred HhhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 345566677788888887777665443333333334444556666665 344544444
No 337
>PF02667 SCFA_trans: Short chain fatty acid transporter; InterPro: IPR006160 Members of this family may be short chain fatty acid transporters although there has been no experimental characterisation of this function.
Probab=35.42 E-value=2.1e+02 Score=26.78 Aligned_cols=13 Identities=8% Similarity=-0.089 Sum_probs=6.9
Q ss_pred HHhhHHhhhhhhh
Q 016374 34 QIAGGIWADTVGG 46 (390)
Q Consensus 34 ~~~~g~l~dr~Gr 46 (390)
+++..++.||+-+
T Consensus 77 sp~v~r~l~~lA~ 89 (453)
T PF02667_consen 77 SPPVKRLLDRLAS 89 (453)
T ss_pred ChHHHHHHHHHHh
Confidence 4555556665443
No 338
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised.; GO: 0016021 integral to membrane
Probab=34.42 E-value=2.7e+02 Score=23.12 Aligned_cols=22 Identities=23% Similarity=0.143 Sum_probs=12.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc
Q 016374 244 PWLTMAFSANLGGWIADTLVSK 265 (390)
Q Consensus 244 ~~~~~~~~~~~~g~l~d~~~~~ 265 (390)
...+.+++..++.++.+|..++
T Consensus 202 ~~~~~~~G~~lG~~~~~~i~~~ 223 (240)
T PF01925_consen 202 LLPGAFLGAFLGAKLARKIPQK 223 (240)
T ss_pred HHHHHHHHHHHHHHHHHhCCHH
Confidence 4445556666666666666544
No 339
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=34.29 E-value=3e+02 Score=23.63 Aligned_cols=67 Identities=22% Similarity=0.471 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHhhHHhhhh-hhhHHHHH----HHHHHHHHHHHHh-hhhhh--hhHHHHHHHHHHHhhcc
Q 016374 20 GLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLG----FGVVWWSIATALT-PVAAK--LGLPFLLVVRVFMGIGE 86 (390)
Q Consensus 20 g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~----~~~~~~~~~~~~~-~~~~~--~~~~~l~~~r~l~G~~~ 86 (390)
....-.+..+..+|....|.+... +.||+.+. .+.+...+..+.. ....+ .+...+++.-++.|.+.
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~ 218 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFL 218 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHH
Confidence 444456667777777888888774 56666543 3344444444432 12221 13566788888888764
No 340
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=33.19 E-value=2.7e+02 Score=22.66 Aligned_cols=50 Identities=14% Similarity=0.143 Sum_probs=32.1
Q ss_pred CCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhc--CChHHHHHHHHHHHHHH
Q 016374 103 VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF--GWPSVFYSFGSLGTVWF 152 (390)
Q Consensus 103 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--gw~~~f~~~~~~~~~~~ 152 (390)
.++.+++..+.-.+..+|.++|..+..++.... +.+.+=.+.+.+..+.+
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~~~~p~~~s~~~~~sl~~~i~l 187 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPVDIVPGPWSPEQLVSLFTYILL 187 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCHHHHHHHHHHHHH
Confidence 566788888888888888888888877765432 33334444444444443
No 341
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=31.96 E-value=4e+02 Score=24.28 Aligned_cols=87 Identities=16% Similarity=0.146 Sum_probs=56.8
Q ss_pred CcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHH----HHHHHHHHHHHHHh-hhhh--hhhHHHHHHHHHHHhhc
Q 016374 13 NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVL----GFGVVWWSIATALT-PVAA--KLGLPFLLVVRVFMGIG 85 (390)
Q Consensus 13 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l----~~~~~~~~~~~~~~-~~~~--~~~~~~l~~~r~l~G~~ 85 (390)
|-+--|.+.+.+.|..+..+|+...-++.|.--.-+.. +.+++.-.-..++. .|+. ..+-+.+++.-++.|.-
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~L 118 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVL 118 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 34556789999999999999999998887753333222 22222111111111 3332 11456777888999998
Q ss_pred cccchhhhhHHhhh
Q 016374 86 EGVAMPAMNNILSK 99 (390)
Q Consensus 86 ~~~~~~~~~~~i~~ 99 (390)
.|...|..+.++..
T Consensus 119 VG~EiPL~mrml~~ 132 (508)
T COG4262 119 VGAEIPLLMRMLQR 132 (508)
T ss_pred HhcchHHHHHHHHH
Confidence 99999999998877
No 342
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=31.80 E-value=2.6e+02 Score=22.08 Aligned_cols=28 Identities=7% Similarity=0.090 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCchhHH
Q 016374 245 WLTMAFSANLGGWIADTLVSKGLSVTTV 272 (390)
Q Consensus 245 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 272 (390)
.+...+.-.+.|+..-|++.+++.+.+.
T Consensus 123 ~~~~~~~L~ilG~~~a~~s~~~~~~s~l 150 (169)
T TIGR00267 123 VLLTLIALLVLGVYLGRISRENILISSL 150 (169)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 3445555566788888888776655443
No 343
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.75 E-value=4.6e+02 Score=24.62 Aligned_cols=22 Identities=9% Similarity=0.037 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCch
Q 016374 248 MAFSANLGGWIADTLVSKGLSV 269 (390)
Q Consensus 248 ~~~~~~~~g~l~d~~~~~~~~~ 269 (390)
.-+....+|-+-.|.|-|++..
T Consensus 340 s~i~GY~~gs~Y~r~gG~~Wik 361 (593)
T KOG1277|consen 340 SPINGYVSGSFYARLGGRRWIK 361 (593)
T ss_pred ccccccccceeeehhccHHHHH
Confidence 3334444444555666665443
No 344
>COG3162 Predicted membrane protein [Function unknown]
Probab=30.19 E-value=2e+02 Score=20.27 Aligned_cols=41 Identities=12% Similarity=0.269 Sum_probs=28.0
Q ss_pred cchhhhhhcCch--hHHHHHHHHHHHHHHHHHhhchHHHHhHh
Q 016374 189 TIPWGLILSKPP--VWALIVSHFCHNWGTFILLTWMPTYYNQV 229 (390)
Q Consensus 189 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 229 (390)
...++++.++++ .|.+.+..+..++++.....+.|.++...
T Consensus 12 ~p~f~eLv~kr~~Fa~~ltl~flv~Y~~filLiaf~~~~l~tp 54 (102)
T COG3162 12 NPRFRELVRKRRRFAVPLTLIFLVVYFGFILLIAFAPGWLATP 54 (102)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHhcCc
Confidence 334556665543 45667777778888888888888777664
No 345
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=30.06 E-value=4.6e+02 Score=24.43 Aligned_cols=65 Identities=8% Similarity=-0.021 Sum_probs=34.1
Q ss_pred cCchhHHHHHHHHHHHHHHHHHhhchHHHHhHh----------cCCcccchhhhhhHhHHHHHHHHHHHHHHHHH
Q 016374 197 SKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV----------LHFNLTESGLFCVLPWLTMAFSANLGGWIADT 261 (390)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 261 (390)
++..++...+..++....+..+.--+-.+++++ .+....+.+.+...+.+.+++.+...-.+.-|
T Consensus 296 ~Rg~lI~W~v~~fllglvygs~fg~l~~fL~~n~avrqave~~e~ag~le~~Flv~lfsIisil~a~~~V~~vlk 370 (536)
T COG3559 296 NRGSLILWTVGLFLLGLVYGSVFGGLGDFLGDNTAVRQAVERMEGAGALEQAFLVLLFSIISILAAAFAVSLVLK 370 (536)
T ss_pred ccCccHHHHHHHHHHHHHHHHHhhhhhhhhcCcHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555566666666655554444444432 23334445566666666666666554444433
No 346
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=29.78 E-value=1.1e+02 Score=20.33 Aligned_cols=38 Identities=11% Similarity=0.290 Sum_probs=18.4
Q ss_pred HHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHH
Q 016374 111 ALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 151 (390)
Q Consensus 111 ~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~ 151 (390)
-+.+....++.+++-.. |+..+. .+..+++.++-.++.
T Consensus 11 ~l~~~il~~~~iisfi~-Gy~~q~--~~~~~~~~~~g~~~~ 48 (76)
T PF06645_consen 11 KLMQYILIISAIISFIV-GYITQS--FSYTFYIYGAGVVLT 48 (76)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHH
Confidence 34445555555555444 444442 455555554444443
No 347
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=29.46 E-value=1.6e+02 Score=18.97 Aligned_cols=31 Identities=13% Similarity=-0.015 Sum_probs=14.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 016374 137 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDP 167 (390)
Q Consensus 137 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (390)
|-.++.+...+.++.+-.+-..+||+.++.+
T Consensus 30 ~Aav~~~~~~~~l~~~~~iG~~LPe~s~~aP 60 (67)
T PF11511_consen 30 YAAVFFLGLWFLLVALYFIGLLLPERSRQAP 60 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSTTTCSS-S
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCchhcccCC
Confidence 4444444444444444445566777655443
No 348
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=28.94 E-value=77 Score=22.65 Aligned_cols=33 Identities=15% Similarity=0.160 Sum_probs=28.2
Q ss_pred cchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCC
Q 016374 235 TESGLFCVLPWLTMAFSANLGGWIADTLVSKGL 267 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 267 (390)
...|-.++.++...++.+++.++..|+....+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~ 86 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRW 86 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChH
Confidence 556788899999999999999999999877644
No 349
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=28.11 E-value=3.9e+02 Score=25.26 Aligned_cols=30 Identities=10% Similarity=0.057 Sum_probs=19.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHH
Q 016374 45 GGKAVLGFGVVWWSIATALTPVAAKLGLPFLL 76 (390)
Q Consensus 45 Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 76 (390)
|.|+......+.+.++.+.-++.+ ++....
T Consensus 339 ~~~~~~~~~~~t~~~sa~WHG~~~--gYyl~f 368 (465)
T PLN02332 339 GKKPGFFQLLATQTVSAVWHGLYP--GYILFF 368 (465)
T ss_pred CcchhHHHHHHHHHHHHHHhcCCc--HHHHHH
Confidence 455555555667778888888887 654443
No 350
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=27.88 E-value=4.7e+02 Score=23.82 Aligned_cols=36 Identities=19% Similarity=0.375 Sum_probs=21.9
Q ss_pred hhcccCCchhHHHHHHH-HhhhhhhHhHHhhHHHHhhhcCCh
Q 016374 98 SKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFGWP 138 (390)
Q Consensus 98 ~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~gw~ 138 (390)
.|+. |.+|-..++... ...+.|.++||.++ ..+||-
T Consensus 47 vDYv-P~~~~vlfghhf~sIAGaGPI~GPi~a----a~~Gwl 83 (376)
T PF02554_consen 47 VDYV-PTNKWVLFGHHFASIAGAGPIVGPILA----AQFGWL 83 (376)
T ss_pred CCCC-CCchHHhhHHHHHHHhccccchHHHHH----HHhcch
Confidence 3455 455566666654 34566677777666 347886
No 351
>COG3619 Predicted membrane protein [Function unknown]
Probab=26.78 E-value=3.8e+02 Score=22.42 Aligned_cols=122 Identities=16% Similarity=0.142 Sum_probs=55.6
Q ss_pred cchHHHHHHHHHHHHHHHHHhhHHhhhhhhh-HH-H-HHHHHHHHHHHHHHhhhhhhh--hHHHHHHH-----------H
Q 016374 16 PATVGLIQSSFFWGYLLTQIAGGIWADTVGG-KA-V-LGFGVVWWSIATALTPVAAKL--GLPFLLVV-----------R 79 (390)
Q Consensus 16 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~-~-l~~~~~~~~~~~~~~~~~~~~--~~~~l~~~-----------r 79 (390)
+...........+...++......+..|..| .. . .....++........++.++. |....+.. |
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~l~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg~Qnasf~ 133 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATRSFIPVLLLVSLLLALIALLALGFIPESSPDFVAVILVAFAMGIQNASFR 133 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 3444555566777777775555555555443 12 2 223333333333333432210 22222222 3
Q ss_pred HHHhhccccchhhh-----hHHhhhcccCC-chhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCC
Q 016374 80 VFMGIGEGVAMPAM-----NNILSKWVPVA-ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 137 (390)
Q Consensus 80 ~l~G~~~~~~~~~~-----~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 137 (390)
=+.|...+..+... ..-+.++..+| +.-.--...+...-.+.++|...++++...+|=
T Consensus 134 k~~g~~~~~t~~TGnl~~~~~~l~~~l~~k~~~~~~~~~~~~~~il~f~~GAi~g~ll~~~~g~ 197 (226)
T COG3619 134 KVGGAPYGTTYVTGNLKSAGRGLGRYLSGKDKEKLRDWLIYLSLILSFIVGAICGALLTLFFGL 197 (226)
T ss_pred HhcCccccchhhhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34444444333221 12234444333 222333444555566677777777777665553
No 352
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=26.71 E-value=1.5e+02 Score=17.64 Aligned_cols=34 Identities=12% Similarity=0.151 Sum_probs=15.6
Q ss_pred hHHhhHHHHhhhcC----ChHHHHHHHHHHHHHHHHHH
Q 016374 123 TGLAFSPFLIHRFG----WPSVFYSFGSLGTVWFTVWL 156 (390)
Q Consensus 123 ~g~~~~~~l~~~~g----w~~~f~~~~~~~~~~~~~~~ 156 (390)
+|..+++++.+.++ +.+.-++.+++..+.++..+
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i~ 43 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFIY 43 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHH
Confidence 44444455444333 34444455555554444333
No 353
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=26.30 E-value=5.8e+02 Score=24.38 Aligned_cols=51 Identities=8% Similarity=0.096 Sum_probs=37.1
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 016374 328 RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAV 378 (390)
Q Consensus 328 ~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 378 (390)
++...-+|-.+...++-..+-..+.+.+.+..||...-.+..++.++..+.
T Consensus 315 ~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~~~ 365 (491)
T PF03219_consen 315 NDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITGLL 365 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHH
Confidence 566777777777777766666778888999999998777776666555443
No 354
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=25.80 E-value=2.3e+02 Score=19.57 Aligned_cols=64 Identities=14% Similarity=0.242 Sum_probs=36.3
Q ss_pred hhhhhcC--chhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhhHhHHHHHHHHHHHHHH
Q 016374 192 WGLILSK--PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWI 258 (390)
Q Consensus 192 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l 258 (390)
++++.|. +-.+.+....+..++++.....+.|..+.....-+....|+.. +++.++......++
T Consensus 7 f~~L~r~r~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~---g~~~~~~~~~l~~~ 72 (91)
T PF04341_consen 7 FQELVRRRRRLAWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVL---GLGQIVFAWVLTWL 72 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHH---HHHHHHHHHHHHHH
Confidence 3444443 3345666677778888888888999888775432334444433 33344444443333
No 355
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=25.69 E-value=4.7e+02 Score=24.19 Aligned_cols=41 Identities=10% Similarity=0.047 Sum_probs=23.0
Q ss_pred ccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhH
Q 016374 87 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS 128 (390)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 128 (390)
+........++ |..+-++---+.++...+...|.+..++..
T Consensus 304 g~v~~~~~~~~-~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 304 GVIVVFSIVLL-DKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HHHHHHHHHHH-HhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 33333333333 445556666677777777666666655543
No 356
>PF04018 DUF368: Domain of unknown function (DUF368); InterPro: IPR007163 This is a predicted transmembrane family of unknown function. Proteins usually have between 6 and 9 predicted transmembrane segments.
Probab=25.53 E-value=4.3e+02 Score=22.63 Aligned_cols=40 Identities=13% Similarity=0.095 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHhc--CC-chhHHHHHHHHHHHHHHHH
Q 016374 340 AGVLAGVFGTAATGYILQH--GS-WDDVFKVSVGLYLVGTAVW 379 (390)
Q Consensus 340 ~~~~g~~ig~~i~g~l~~~--~g-~~~~~~~~~~~~~~~~~~~ 379 (390)
...+|..+|-.....+.++ .. ++..+.+...+.+-+....
T Consensus 193 ~f~~G~~~Gi~~~skll~~ll~~~~~~t~~~i~GlviGSl~~i 235 (257)
T PF04018_consen 193 PFGIGVVIGILLFSKLLSYLLKRYRSQTYAFIIGLVIGSLRAI 235 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 3445566666655555554 22 3344554444444444443
No 357
>PRK02237 hypothetical protein; Provisional
Probab=25.47 E-value=1.3e+02 Score=21.63 Aligned_cols=33 Identities=12% Similarity=0.012 Sum_probs=28.0
Q ss_pred cchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCC
Q 016374 235 TESGLFCVLPWLTMAFSANLGGWIADTLVSKGL 267 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 267 (390)
...|-.++.++...++.+++.++..|+....+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~ 88 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRW 88 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChh
Confidence 347788999999999999999999999877644
No 358
>PRK11588 hypothetical protein; Provisional
Probab=25.25 E-value=6.1e+02 Score=24.30 Aligned_cols=32 Identities=9% Similarity=0.086 Sum_probs=18.9
Q ss_pred hHHhhhhhhhHHH--HHHHHHHHHHHHHHhhhhh
Q 016374 37 GGIWADTVGGKAV--LGFGVVWWSIATALTPVAA 68 (390)
Q Consensus 37 ~g~l~dr~Grr~~--l~~~~~~~~~~~~~~~~~~ 68 (390)
.+++.+|++.|.. +.+.+.+++++....+.+.
T Consensus 136 i~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~E 169 (506)
T PRK11588 136 ILALIRKTRGNEILFIPVLFILFSLGGAVFGMGE 169 (506)
T ss_pred HHHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhH
Confidence 3677888876643 3444455555555556655
No 359
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=24.88 E-value=36 Score=25.44 Aligned_cols=12 Identities=8% Similarity=0.108 Sum_probs=5.3
Q ss_pred hHHHHHHHHHHH
Q 016374 138 PSVFYSFGSLGT 149 (390)
Q Consensus 138 ~~~f~~~~~~~~ 149 (390)
||++++..++.+
T Consensus 1 RW~l~~iii~~i 12 (130)
T PF12273_consen 1 RWVLFAIIIVAI 12 (130)
T ss_pred CeeeHHHHHHHH
Confidence 455544433333
No 360
>PRK12489 anaerobic C4-dicarboxylate transporter; Reviewed
Probab=24.73 E-value=5.9e+02 Score=23.93 Aligned_cols=23 Identities=13% Similarity=-0.117 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCch
Q 016374 247 TMAFSANLGGWIADTLVSKGLSV 269 (390)
Q Consensus 247 ~~~~~~~~~g~l~d~~~~~~~~~ 269 (390)
.+.+..++++.=.|+..+.....
T Consensus 279 ~a~~i~l~~k~~~~~i~~~~vF~ 301 (443)
T PRK12489 279 TGALILILTKTDPASISNGEVFK 301 (443)
T ss_pred HHHHHHHHcCCCHHHhccchhhH
Confidence 33444444444444544443333
No 361
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=24.61 E-value=3.7e+02 Score=24.85 Aligned_cols=47 Identities=19% Similarity=0.193 Sum_probs=27.1
Q ss_pred HhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhH
Q 016374 82 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS 128 (390)
Q Consensus 82 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 128 (390)
.|+-.+........++.+..+-|+---+.++.....-+|.+..++..
T Consensus 285 iG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 285 IGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 34333434444444455666555555577777777777776666554
No 362
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=24.30 E-value=1.9e+02 Score=18.21 Aligned_cols=33 Identities=15% Similarity=0.254 Sum_probs=16.6
Q ss_pred HhhhcCC-----hHHHHHHHHHH---HHHHHHHHhhccCCC
Q 016374 131 LIHRFGW-----PSVFYSFGSLG---TVWFTVWLSKAHSSP 163 (390)
Q Consensus 131 l~~~~gw-----~~~f~~~~~~~---~~~~~~~~~~~~~~~ 163 (390)
+.+++|| |..|.+..... ++.=++.+...|++|
T Consensus 20 lA~~~gid~~~vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 20 LAEYFGIDPTLVRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 4455553 66666655543 222234455666654
No 363
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=23.63 E-value=1.5e+02 Score=25.57 Aligned_cols=29 Identities=14% Similarity=-0.016 Sum_probs=14.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHhhcCCC
Q 016374 359 GSWDDVFKVSVGLYLVGTAVWNLFSTGEK 387 (390)
Q Consensus 359 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (390)
..|..+-++..++.++-.+++.++.|++|
T Consensus 259 ~Pcgiaalvllil~vvliiLYiWlyrrRK 287 (295)
T TIGR01478 259 LPYGIAALVLIILTVVLIILYIWLYRRRK 287 (295)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 45555555555555555555555544443
No 364
>PTZ00370 STEVOR; Provisional
Probab=23.57 E-value=1.4e+02 Score=25.68 Aligned_cols=30 Identities=13% Similarity=-0.030 Sum_probs=15.4
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHhhcCCC
Q 016374 358 HGSWDDVFKVSVGLYLVGTAVWNLFSTGEK 387 (390)
Q Consensus 358 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (390)
...|..+-++..++.++-.+++.++.|++|
T Consensus 254 F~Pygiaalvllil~vvliilYiwlyrrRK 283 (296)
T PTZ00370 254 FYPYGIAALVLLILAVVLIILYIWLYRRRK 283 (296)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 345555555555555555555555544443
No 365
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=23.49 E-value=4.2e+02 Score=22.97 Aligned_cols=17 Identities=12% Similarity=0.200 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHhhhhh
Q 016374 52 FGVVWWSIATALTPVAA 68 (390)
Q Consensus 52 ~~~~~~~~~~~~~~~~~ 68 (390)
.+.++++++.++..+..
T Consensus 4 ~~~~~~~~~s~~~~l~~ 20 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLF 20 (284)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 34444444444444443
No 366
>PRK15049 L-asparagine permease; Provisional
Probab=22.98 E-value=6.7e+02 Score=23.93 Aligned_cols=17 Identities=6% Similarity=0.063 Sum_probs=8.7
Q ss_pred CChHHHHHHHHHHHHHH
Q 016374 136 GWPSVFYSFGSLGTVWF 152 (390)
Q Consensus 136 gw~~~f~~~~~~~~~~~ 152 (390)
+.|+...+.....++..
T Consensus 446 ~~~~~~~~~~~~~~~~~ 462 (499)
T PRK15049 446 NGTYTIAALPIIGILLV 462 (499)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 46666665544444433
No 367
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=22.28 E-value=2.7e+02 Score=21.46 Aligned_cols=50 Identities=14% Similarity=0.030 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q 016374 24 SSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 81 (390)
Q Consensus 24 s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 81 (390)
-.++++..+.+...-.+..|..||+.-..+. ++..+.++ |..++.++..+
T Consensus 68 f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~gi------Si~Gai~H--N~gQl~va~~i 117 (148)
T PF07456_consen 68 FLFSLAGGLLSLLVMALLKKLFKKKFSLIGI------SIAGAIAH--NIGQLIVASLI 117 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccHHHH------HHHHHHHH--HHHHHHHHHHH
Confidence 4566677777777777788887666544443 22345556 66666666554
No 368
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=22.18 E-value=2.3e+02 Score=18.79 Aligned_cols=30 Identities=10% Similarity=-0.127 Sum_probs=23.5
Q ss_pred HhhhhhhhHHHHHHHHHHHHHHHHHhhhhh
Q 016374 39 IWADTVGGKAVLGFGVVWWSIATALTPVAA 68 (390)
Q Consensus 39 ~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 68 (390)
.--|+-.|++-+.+.+.+-..+.++..+..
T Consensus 9 ~~~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~ 38 (73)
T PF11298_consen 9 LSQDQRRRRRRYLIMMGIRIPCFVLAAVVY 38 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345777888889888888888888777766
No 369
>COG1983 PspC Putative stress-responsive transcriptional regulator [Transcription / Signal transduction mechanisms]
Probab=21.87 E-value=2.4e+02 Score=18.45 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=16.6
Q ss_pred HhhhcCC-----hHHHHHHHHHH------HHHHHHHHhhccCCCC
Q 016374 131 LIHRFGW-----PSVFYSFGSLG------TVWFTVWLSKAHSSPA 164 (390)
Q Consensus 131 l~~~~gw-----~~~f~~~~~~~------~~~~~~~~~~~~~~~~ 164 (390)
+.+++|| |..+.+..... +++-++.++..|+.+.
T Consensus 21 la~yf~id~tlVRll~vl~~~~~~~~~~~ii~Yiia~~imP~~~~ 65 (70)
T COG1983 21 LAEYFGIDPTLVRLLFVLLTLFGGLTGFGIIAYIIAALIMPSEED 65 (70)
T ss_pred HHHHhCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHCCCCcc
Confidence 5566776 44444444443 2323344555565443
No 370
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=21.78 E-value=3.5e+02 Score=24.91 Aligned_cols=48 Identities=17% Similarity=0.150 Sum_probs=27.0
Q ss_pred HHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhh
Q 016374 80 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAF 127 (390)
Q Consensus 80 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 127 (390)
++.|+..+.........+.+..+-|+---+.++.......|.+..++.
T Consensus 278 ~~iG~iag~i~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glf 325 (399)
T PF00909_consen 278 LLIGAIAGLISYFGVSWLLKRLKIDDPVGAFAVHGVGGIWGTILTGLF 325 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTS-HTTGHHHHCHHHHHHHHHHHHHH
T ss_pred HHhhhhHhhhhhhheecccceeEeccccceEeeeeccHHHHHHHHHHH
Confidence 334444443434444456666666666667787777766666665544
No 371
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=21.36 E-value=1.3e+02 Score=21.05 Aligned_cols=23 Identities=22% Similarity=0.278 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHhhHHhhhhhhhH
Q 016374 25 SFFWGYLLTQIAGGIWADTVGGK 47 (390)
Q Consensus 25 ~~~~~~~~~~~~~g~l~dr~Grr 47 (390)
.....+.+.+.+.|.+.||..||
T Consensus 83 ~~~~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 83 ITFAVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Confidence 44455566778888888888765
No 372
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=20.77 E-value=3.3e+02 Score=19.58 Aligned_cols=55 Identities=16% Similarity=0.115 Sum_probs=34.3
Q ss_pred HHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhcccc
Q 016374 33 TQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 88 (390)
Q Consensus 33 ~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 88 (390)
..-..=+.+|.+.|+...+...+...++..+.+.+-+ +.+.=.+--...|+|...
T Consensus 16 ~~~~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~alk-~ipvgvAYAiW~GiG~v~ 70 (106)
T COG2076 16 VGTTLLKYSDGFTRLWPSILTIVGYGLSFYLLSLALK-TIPLGVAYAIWTGIGIVG 70 (106)
T ss_pred HHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHh-hCchHHHHHHHHHHHHHH
Confidence 3344556788888888888888888877777776642 233333334555555443
No 373
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=20.28 E-value=4.6e+02 Score=24.16 Aligned_cols=102 Identities=10% Similarity=0.097 Sum_probs=58.1
Q ss_pred ccccc-cccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHh
Q 016374 5 ILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMG 83 (390)
Q Consensus 5 lp~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 83 (390)
.|.+. +..|.++++...+.+.-.+...++.++-.+-.-++|.|..+..+.....+......- .+.++...+.+-++.|
T Consensus 15 ~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~-~~~~~~~~~ga~~v~G 93 (406)
T TIGR03173 15 VPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIG-AGGGLGAIFGAVIVAG 93 (406)
T ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHh-hhhhHHHHHHHHHHHH
Confidence 34443 445899888888888888888888887753333577776665554443333222211 1114555555556665
Q ss_pred hccccchhhhhHHhhhcccCCchhH
Q 016374 84 IGEGVAMPAMNNILSKWVPVAERSR 108 (390)
Q Consensus 84 ~~~~~~~~~~~~~i~~~~~~~~r~~ 108 (390)
+-.-... .....+.+.+|+.-.|.
T Consensus 94 ii~illg-~~~~~l~~~iPp~v~G~ 117 (406)
T TIGR03173 94 LFVILLA-PFFSKLVRFFPPVVTGT 117 (406)
T ss_pred HHHHHHH-HHHHHHHHHCCcHHHHH
Confidence 4432222 24455777777655443
No 374
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=20.08 E-value=1.6e+02 Score=15.86 Aligned_cols=19 Identities=16% Similarity=0.499 Sum_probs=11.7
Q ss_pred HhHHHHHHHHHHHHHHHHH
Q 016374 243 LPWLTMAFSANLGGWIADT 261 (390)
Q Consensus 243 ~~~~~~~~~~~~~g~l~d~ 261 (390)
...+++++.+++.+|+-+|
T Consensus 16 AP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 16 APIIAGIIASLIVGWLRNR 34 (35)
T ss_pred hHHHHHHHHHHHHHHHHhc
Confidence 4456666777776766544
Done!