BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016377
(390 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359476106|ref|XP_002282454.2| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Vitis
vinifera]
Length = 393
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 289/391 (73%), Positives = 324/391 (82%), Gaps = 5/391 (1%)
Query: 1 MEKDMCKNDGE-AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR 59
MEK +C GE WRVLEFYSGIGGMRYSL + V+A++VEAFDIN+ ANDVY+ NFGHR
Sbjct: 1 MEKGLCNPQGEDPWRVLEFYSGIGGMRYSLKRGGVNAKIVEAFDINNIANDVYQHNFGHR 60
Query: 60 PYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
P QGNIQ+LTAA+LD Y AHAWLLSPPCQPYTRQGLQK S DARAFSFLKILELI HT+
Sbjct: 61 PCQGNIQSLTAADLDRYRAHAWLLSPPCQPYTRQGLQKHSGDARAFSFLKILELIQHTLH 120
Query: 120 PPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKP 179
PP MLFVENVVGFETSDTH KMIEIL+ + ++TQEFILSP+QFGVPYSRPRYFCLAKRKP
Sbjct: 121 PPLMLFVENVVGFETSDTHEKMIEILSKTGFVTQEFILSPIQFGVPYSRPRYFCLAKRKP 180
Query: 180 LSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQ 239
LSF QL NNQLL +PSPL G++D ++I +HDQ + WDKLL+SC+PVERFLEF N+ +
Sbjct: 181 LSFENQLFNNQLLSTPSPLFGHEDDSLIDEHDQSEKIWDKLLQSCEPVERFLEFKNTINP 240
Query: 240 VNTETGFLSTGTAAVDDFGAAEETVEVDR--CVSIDHFLVPLSLIERWGSAMDIVYPDSK 297
+ TE+ +L T + + D G E E DR S D F VPLSLIERWGSAMDIVYPDSK
Sbjct: 241 LETESSYLDTLSVSTDASGELENN-ERDRSDSNSWDQFSVPLSLIERWGSAMDIVYPDSK 299
Query: 298 RCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFP 357
RCCCFTKSYYRYVKGTGSLLAT Q K K KAS L+EQ LRYFTPREVANLHSFP DF FP
Sbjct: 300 RCCCFTKSYYRYVKGTGSLLATGQSK-KDKASLLEEQCLRYFTPREVANLHSFPEDFHFP 358
Query: 358 HHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
H++LRQRYALLGNSLS+AVVAPLL YLF Q
Sbjct: 359 QHVNLRQRYALLGNSLSVAVVAPLLTYLFTQ 389
>gi|224092438|ref|XP_002309610.1| DNA methyltransferase [Populus trichocarpa]
gi|222855586|gb|EEE93133.1| DNA methyltransferase [Populus trichocarpa]
Length = 350
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 281/376 (74%), Positives = 310/376 (82%), Gaps = 27/376 (7%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
WRVLEFYSGIGGMRYSLMKA V+A+VVEAFDINDKANDVYE NFGHRPYQGNI+ LTAA+
Sbjct: 2 WRVLEFYSGIGGMRYSLMKAGVNAKVVEAFDINDKANDVYEYNFGHRPYQGNIETLTAAD 61
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
LD YGAH WLLSPPCQPYTRQGLQKQS DARAFSFLKILELIPHT +PP+MLFVENVVGF
Sbjct: 62 LDNYGAHTWLLSPPCQPYTRQGLQKQSGDARAFSFLKILELIPHTKQPPNMLFVENVVGF 121
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 192
ETSDT AKMIEILA+S+Y+TQEFILSPLQFGVPYSRPRYFCLAKRKPLSF ++ NN+LL
Sbjct: 122 ETSDTRAKMIEILASSEYITQEFILSPLQFGVPYSRPRYFCLAKRKPLSFHHEVCNNKLL 181
Query: 193 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTA 252
SPSPL +++ V DQP +WD L+ SC+PVERFLEF +S ++V TG
Sbjct: 182 WSPSPLFEHNENNVTDGWDQPPVNWDTLIHSCEPVERFLEFKSSSNRV--------TGGT 233
Query: 253 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 312
D ++VPLSLIERW SAMDIVYPDSKRCCCFTKSYYRYVKG
Sbjct: 234 GTD-------------------YIVPLSLIERWESAMDIVYPDSKRCCCFTKSYYRYVKG 274
Query: 313 TGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNS 372
TGSLLAT+QP KGK SSLK+Q LRYFTPREVANLHSFP DFQFP +SLRQ YALLGNS
Sbjct: 275 TGSLLATIQPNIKGKESSLKKQGLRYFTPREVANLHSFPDDFQFPEAISLRQCYALLGNS 334
Query: 373 LSIAVVAPLLQYLFAQ 388
LS+AVVAPLL+YLF+Q
Sbjct: 335 LSVAVVAPLLRYLFSQ 350
>gi|296081999|emb|CBI21004.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust.
Identities = 280/389 (71%), Positives = 312/389 (80%), Gaps = 28/389 (7%)
Query: 1 MEKDMCKNDGE-AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR 59
MEK +C GE WRVLEFYSGIGGMRYSL + V+A++VEAFDIN+ ANDVY+ NFGHR
Sbjct: 1 MEKGLCNPQGEDPWRVLEFYSGIGGMRYSLKRGGVNAKIVEAFDINNIANDVYQHNFGHR 60
Query: 60 PYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
P QGNIQ+LTAA+LD Y AHAWLLSPPCQPYTRQGLQK S DARAFSFLKILELI HT+
Sbjct: 61 PCQGNIQSLTAADLDRYRAHAWLLSPPCQPYTRQGLQKHSGDARAFSFLKILELIQHTLH 120
Query: 120 PPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKP 179
PP MLFVENVVGFETSDTH KMIEIL+ + ++TQEFILSP+QFGVPYSRPRYFCLAKRKP
Sbjct: 121 PPLMLFVENVVGFETSDTHEKMIEILSKTGFVTQEFILSPIQFGVPYSRPRYFCLAKRKP 180
Query: 180 LSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQ 239
LSF QL NNQLL +PSPL G++D ++I +HDQ + WDKLL+SC+PVERFLEF N+ +
Sbjct: 181 LSFENQLFNNQLLSTPSPLFGHEDDSLIDEHDQSEKIWDKLLQSCEPVERFLEFKNTINP 240
Query: 240 VNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRC 299
+ T+ S D F VPLSLIERWGSAMDIVYPDSKRC
Sbjct: 241 LETDN--------------------------SWDQFSVPLSLIERWGSAMDIVYPDSKRC 274
Query: 300 CCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHH 359
CCFTKSYYRYVKGTGSLLAT Q K K KAS L+EQ LRYFTPREVANLHSFP DF FP H
Sbjct: 275 CCFTKSYYRYVKGTGSLLATGQSK-KDKASLLEEQCLRYFTPREVANLHSFPEDFHFPQH 333
Query: 360 LSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
++LRQRYALLGNSLS+AVVAPLL YLF Q
Sbjct: 334 VNLRQRYALLGNSLSVAVVAPLLTYLFTQ 362
>gi|255548992|ref|XP_002515552.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223545496|gb|EEF47001.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 404
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/384 (69%), Positives = 308/384 (80%), Gaps = 12/384 (3%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60
ME K + E WR+LEFYSGIGGMRYSLMKA V+A+V+EAFDIN+ AND YE NFGHRP
Sbjct: 1 MEAGFVKGENEPWRILEFYSGIGGMRYSLMKAGVNAKVMEAFDINNIANDAYEHNFGHRP 60
Query: 61 YQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP 120
YQGNIQ+LTAA+LD Y AHAWLLSPPCQPYTRQGLQK S DARAFSFLKILELIPHT +P
Sbjct: 61 YQGNIQSLTAADLDSYAAHAWLLSPPCQPYTRQGLQKHSGDARAFSFLKILELIPHTKQP 120
Query: 121 PHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
PHMLFVENVVGFETSDT M+EILANS ++TQEFILSPLQFG+PYSRPRYFCLAKRKPL
Sbjct: 121 PHMLFVENVVGFETSDTRTNMVEILANSGFVTQEFILSPLQFGIPYSRPRYFCLAKRKPL 180
Query: 181 SFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQV 240
F+ + +N+QL+ S PL G+D+ TV ++DQ +SWDKLL+SC+PV FLEF NS + V
Sbjct: 181 LFQHKYINHQLVWSLGPLFGHDEGTVADRYDQSPESWDKLLQSCEPVVSFLEFKNSSNGV 240
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
+ ET F+ A +D G E T E + ++D ++VP +LIERWGSAMDIVYPDS RCC
Sbjct: 241 DAETDFV----AITNDSGDLENTGEGN-LTTMDQYIVPSNLIERWGSAMDIVYPDSNRCC 295
Query: 301 CFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHL 360
CFTKSYYRYVKGTGSLLATVQPK KGK SSL E+ LRYFTPREVANLHSFP DF FP H+
Sbjct: 296 CFTKSYYRYVKGTGSLLATVQPKEKGKTSSLHEKGLRYFTPREVANLHSFPKDFHFPEHI 355
Query: 361 SLRQRYALLGNSLSIAVVAPLLQY 384
SLRQR LSI+ V + +
Sbjct: 356 SLRQR-------LSISFVGSMCMF 372
>gi|297812763|ref|XP_002874265.1| DNA methyltransferase-2 [Arabidopsis lyrata subsp. lyrata]
gi|297320102|gb|EFH50524.1| DNA methyltransferase-2 [Arabidopsis lyrata subsp. lyrata]
Length = 383
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 269/380 (70%), Positives = 308/380 (81%), Gaps = 9/380 (2%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQN 67
++ + WRVLEFYSGIGGMRYSLM + V A+VVEAF+IND ANDVY+ NF HRPYQGNIQ+
Sbjct: 10 DEKKPWRVLEFYSGIGGMRYSLMASGVVAEVVEAFEINDSANDVYQHNFKHRPYQGNIQS 69
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
LTA +LD Y A AWLLSPPCQPYTRQGLQKQS DARAFSFL+ILELIPHT KPP +LFVE
Sbjct: 70 LTAVDLDKYNADAWLLSPPCQPYTRQGLQKQSGDARAFSFLRILELIPHTSKPPQILFVE 129
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 187
NVVGFETSDTH +MI+ L +Y+TQEFILSPLQFGVPYSRPRYFCLAKRKPL F+ Q
Sbjct: 130 NVVGFETSDTHMEMIDTLTKLNYVTQEFILSPLQFGVPYSRPRYFCLAKRKPLPFKSQHS 189
Query: 188 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFL 247
NN+LL SPSPL G DD + K Q ++ DKLL+ C+PVE+FLE S V+ E +
Sbjct: 190 NNKLLWSPSPLYGCDDQVEVGKC-QAEEGLDKLLQFCEPVEKFLE---SAAHVDGEPSSV 245
Query: 248 -STGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 306
+ + D +G +++V S+ +LVP+SLIERWG+AMDIVYPDSKRCCCFTKSY
Sbjct: 246 DDSENGSKDCYGQEDDSVP----DSVHQYLVPVSLIERWGNAMDIVYPDSKRCCCFTKSY 301
Query: 307 YRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRY 366
YRYVKGTGSLLATVQPK KGK S LKEQ LRYFTPREVAN HSFP DF FP H+SLRQRY
Sbjct: 302 YRYVKGTGSLLATVQPKIKGKESCLKEQRLRYFTPREVANFHSFPEDFVFPKHISLRQRY 361
Query: 367 ALLGNSLSIAVVAPLLQYLF 386
A+LGNSLS+AVVAPLL+YLF
Sbjct: 362 AMLGNSLSVAVVAPLLRYLF 381
>gi|18420929|ref|NP_568474.1| DNA methyltransferase-2 [Arabidopsis thaliana]
gi|332006070|gb|AED93453.1| DNA methyltransferase-2 [Arabidopsis thaliana]
Length = 383
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 268/379 (70%), Positives = 299/379 (78%), Gaps = 7/379 (1%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQN 67
N+ + W+VLEFYSGIGGMRYSLM + + ++VVEAF+IND ANDVY+ NF HRPYQGNIQ+
Sbjct: 10 NEKKPWQVLEFYSGIGGMRYSLMASGIVSEVVEAFEINDSANDVYQHNFKHRPYQGNIQS 69
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
LTAA+LD Y A AWLLSPPCQPYTRQGLQK S DARAFSFL+ILELIPHT KPP MLFVE
Sbjct: 70 LTAADLDKYNADAWLLSPPCQPYTRQGLQKHSGDARAFSFLRILELIPHTTKPPQMLFVE 129
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 187
NVVGFETSDTH +MI L DY+TQEFILSPLQFGVPYSRPRYFCLAKRKPL F+ Q
Sbjct: 130 NVVGFETSDTHMEMIGTLTKLDYVTQEFILSPLQFGVPYSRPRYFCLAKRKPLPFKSQHS 189
Query: 188 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFL 247
NN+LL SP PL G DD K Q ++ DKLLE C PVE+FLE + V+ E +
Sbjct: 190 NNKLLWSPDPLYGRDDQVEFGKC-QAEEGLDKLLEFCKPVEKFLELAA---HVDGEPSSV 245
Query: 248 STGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYY 307
D E D S+ +LVP+SLIERWG+AMDIVYPDSKRCCCFTKSYY
Sbjct: 246 DDSENGSKDCCGQEGDSVPD---SVHQYLVPVSLIERWGNAMDIVYPDSKRCCCFTKSYY 302
Query: 308 RYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYA 367
RYVKGTGSLLATVQPK KGK S LKEQ LRYFTPREVAN HSFP DF+FP H+SLRQRYA
Sbjct: 303 RYVKGTGSLLATVQPKIKGKESCLKEQRLRYFTPREVANFHSFPEDFEFPKHISLRQRYA 362
Query: 368 LLGNSLSIAVVAPLLQYLF 386
+LGNSLS+AVVAPLL+YLF
Sbjct: 363 MLGNSLSVAVVAPLLRYLF 381
>gi|21553420|gb|AAM62513.1| DNA methyltransferase PMT1-like protein [Arabidopsis thaliana]
Length = 383
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/379 (70%), Positives = 299/379 (78%), Gaps = 7/379 (1%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQN 67
N+ + W+VLEFYSGIGGMRYSLM + + ++VVEAF+IND ANDVY+ NF HRPYQGNIQ+
Sbjct: 10 NEKKPWQVLEFYSGIGGMRYSLMASGIVSEVVEAFEINDSANDVYQHNFKHRPYQGNIQS 69
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
LTAA+LD Y A AWLLSPPCQPYTRQGLQK S DARA SFL+ILELIPHT KPP MLFVE
Sbjct: 70 LTAADLDKYNADAWLLSPPCQPYTRQGLQKHSGDARASSFLRILELIPHTTKPPQMLFVE 129
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 187
NVVGFETSDTH +MI L DY+TQEFILSPLQFGVPYSRPRYFCLAKRKPL F+ Q
Sbjct: 130 NVVGFETSDTHMEMIGTLTKLDYVTQEFILSPLQFGVPYSRPRYFCLAKRKPLPFKSQHS 189
Query: 188 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFL 247
NN+LL SP PL G DD K Q ++ DKLLE C+PVE+FLE + V+ E +
Sbjct: 190 NNKLLWSPDPLYGRDDQVEFGKC-QAEEGLDKLLEFCEPVEKFLELAA---HVDGEPSSV 245
Query: 248 STGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYY 307
D E D S+ +LVP+SLIERWG+AMDIVYPDSKRCCCFTKSYY
Sbjct: 246 DDSENGSKDCCGQEGDSVPD---SVHQYLVPVSLIERWGNAMDIVYPDSKRCCCFTKSYY 302
Query: 308 RYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYA 367
RYVKGTGSLLATVQPK KGK S LKEQ LRYFTPREVAN HSFP DF+FP H+SLRQRYA
Sbjct: 303 RYVKGTGSLLATVQPKIKGKESCLKEQRLRYFTPREVANFHSFPEDFEFPKHISLRQRYA 362
Query: 368 LLGNSLSIAVVAPLLQYLF 386
+LGNSLS+AVVAPLL+YLF
Sbjct: 363 MLGNSLSVAVVAPLLRYLF 381
>gi|449441930|ref|XP_004138735.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Cucumis
sativus]
gi|449514978|ref|XP_004164528.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Cucumis
sativus]
Length = 385
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 266/389 (68%), Positives = 304/389 (78%), Gaps = 7/389 (1%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60
MEK K E WRVLEFYSGIGGMRYSL+ A + A+VV+AFDINDKANDVYE NFG RP
Sbjct: 1 MEKVFPKLQDEPWRVLEFYSGIGGMRYSLLSAGIHAKVVQAFDINDKANDVYEHNFGDRP 60
Query: 61 YQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP 120
YQGNI++LTAA++D Y AH WLLSPPCQPYTRQGLQKQS DARAFSFLKILEL+ +P
Sbjct: 61 YQGNIESLTAADIDSYQAHVWLLSPPCQPYTRQGLQKQSGDARAFSFLKILELMVEASRP 120
Query: 121 PHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
P MLF+ENVVGFETSDTH KMIEIL + + TQEFILSP+QFGVPYSRPRYFCLAKRKPL
Sbjct: 121 PVMLFMENVVGFETSDTHTKMIEILEKTGFSTQEFILSPMQFGVPYSRPRYFCLAKRKPL 180
Query: 181 SFRCQLLNNQLLRSPSPLLGND-DMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQ 239
F +L NNQLL SP+PLL +D ++ I H S DKLL SC+P+ RFL+ SN +
Sbjct: 181 FFEKELYNNQLLWSPNPLLDSDANLESIETHGSQATS-DKLLLSCEPICRFLDHSNHQEL 239
Query: 240 VNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRC 299
+ + + A + A E+ +E + +LVP SLI+RWGSAMDIVYPDS+RC
Sbjct: 240 SFYDASSIQSEVALEKNKDADEQVIE-----PFNQYLVPSSLIDRWGSAMDIVYPDSRRC 294
Query: 300 CCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHH 359
CCFTKSYYRYVKGTGSLLA + + GKA SLKEQ LRYFTPREVANLHSFP DFQFP H
Sbjct: 295 CCFTKSYYRYVKGTGSLLAPFETEGMGKAHSLKEQKLRYFTPREVANLHSFPEDFQFPQH 354
Query: 360 LSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
+ LRQRYALLGNSLSIAVVAPLL+YLF +
Sbjct: 355 IGLRQRYALLGNSLSIAVVAPLLRYLFTE 383
>gi|363814463|ref|NP_001242866.1| uncharacterized protein LOC100792567 [Glycine max]
gi|255640237|gb|ACU20409.1| unknown [Glycine max]
Length = 385
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/390 (68%), Positives = 306/390 (78%), Gaps = 8/390 (2%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60
M K+ ++ G WRVLEFYSGIGGMRYSLMKA V+AQVV+AF+IND ANDVY+ NFGHRP
Sbjct: 1 MAKESSESRG-CWRVLEFYSGIGGMRYSLMKAQVNAQVVQAFEINDTANDVYQHNFGHRP 59
Query: 61 YQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP 120
YQGNIQ LTAA+LD YGA AWLLSPPCQPYTRQGLQK + DARAFSFL+ILEL+P ++P
Sbjct: 60 YQGNIQCLTAADLDKYGADAWLLSPPCQPYTRQGLQKDTGDARAFSFLQILELMPFLLRP 119
Query: 121 PHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
P MLFVENVVGFETSDT+AK+IEIL ++++TQEFIL+PLQFG+PYSRPRYFCLAKRKP
Sbjct: 120 PSMLFVENVVGFETSDTYAKLIEILEKTNFITQEFILTPLQFGIPYSRPRYFCLAKRKPS 179
Query: 181 SFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQV 240
SF + LN+QL++SP PL + D T + D + LL+SC P+E FLE N +
Sbjct: 180 SFVNECLNSQLIQSPPPLFEHFD-TAADEDDSSKEDRQNLLQSCQPIENFLELKNPSSDI 238
Query: 241 NTETGFLSTGTA--AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKR 298
E+ L T + A G E + S+D + V SLIERWGSAMD+VYPDSKR
Sbjct: 239 AVESVALRTDLSNDAPRTLGKNNGHDEYE---SLDQYFVHPSLIERWGSAMDVVYPDSKR 295
Query: 299 CCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPH 358
CCCFTKSYYRYVKGTGSLLATVQP + K +SLKEQ LRYFTPREVANLHSFP F FP
Sbjct: 296 CCCFTKSYYRYVKGTGSLLATVQPVKRDK-TSLKEQCLRYFTPREVANLHSFPEGFVFPE 354
Query: 359 HLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
H+SLRQRYALLGNSLSIAVVAPLLQYLF Q
Sbjct: 355 HISLRQRYALLGNSLSIAVVAPLLQYLFTQ 384
>gi|357445897|ref|XP_003593226.1| tRNA (cytosine-5-)-methyltransferase [Medicago truncatula]
gi|355482274|gb|AES63477.1| tRNA (cytosine-5-)-methyltransferase [Medicago truncatula]
Length = 378
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/379 (67%), Positives = 298/379 (78%), Gaps = 4/379 (1%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
E RVLEFYSGIGGMRYSLMKA V+A+V+EAF+IN+ ANDVY+ NF HRPYQGNIQ LTA
Sbjct: 4 EMQRVLEFYSGIGGMRYSLMKAQVNAEVIEAFEINNIANDVYQHNFSHRPYQGNIQCLTA 63
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+LD YGA AWLLSPPCQPYTRQGLQK + DARAFSFL+ILELIP ++PP MLFVENVV
Sbjct: 64 TDLDKYGADAWLLSPPCQPYTRQGLQKDTGDARAFSFLQILELIPFLLQPPSMLFVENVV 123
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 190
GFETSDTHAK+IEIL ++++TQEFILSPLQFG+PYSRPRYFCLAKRKP SF LN Q
Sbjct: 124 GFETSDTHAKLIEILEKTNFITQEFILSPLQFGIPYSRPRYFCLAKRKPSSFLNGCLNRQ 183
Query: 191 LLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 250
L++SP PL + + T + D + LL+SC P+E+FL N N E+ ++
Sbjct: 184 LIQSPRPLFEHFN-TAPKEDDLSLEDSQNLLQSCQPIEKFLVLKNPNSDTNVESA--AST 240
Query: 251 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 310
T+ +D T ++D + V SL+ERWGSAMD+VYPDSKRCCCFTKSYYRYV
Sbjct: 241 TSLSNDTSRTSGTDNDHEYDTLDKYYVHPSLLERWGSAMDVVYPDSKRCCCFTKSYYRYV 300
Query: 311 KGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLG 370
KGTGSLLATVQP + K +SLKEQ LRYFTPREVANLHSFP DF+FP H+SL+QRYALLG
Sbjct: 301 KGTGSLLATVQPVKRDK-TSLKEQCLRYFTPREVANLHSFPEDFEFPEHISLKQRYALLG 359
Query: 371 NSLSIAVVAPLLQYLFAQA 389
NSLSIAVVA LLQYLF +A
Sbjct: 360 NSLSIAVVASLLQYLFTEA 378
>gi|162461489|ref|NP_001105173.1| DNA methyl transferase4 [Zea mays]
gi|13936240|gb|AAK40306.1| DNA methyltransferase ZMET4 [Zea mays]
gi|194697288|gb|ACF82728.1| unknown [Zea mays]
gi|413950584|gb|AFW83233.1| DNA methyltransferase ZMET4 isoform 1 [Zea mays]
gi|413950585|gb|AFW83234.1| DNA methyltransferase ZMET4 isoform 2 [Zea mays]
Length = 357
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/382 (62%), Positives = 283/382 (74%), Gaps = 36/382 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
WRVLEFYSGIGG+RYSLM + V A+VVEAFDIND ANDVYE NFGHRP QGNIQ LTA++
Sbjct: 7 WRVLEFYSGIGGLRYSLMASGVRAEVVEAFDINDVANDVYEHNFGHRPCQGNIQTLTASD 66
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
LD Y AHAWLLSPPCQPYTRQGLQK S+DARAFSF+KIL L+ PP MLFVENVVGF
Sbjct: 67 LDKYKAHAWLLSPPCQPYTRQGLQKHSADARAFSFIKILNLMQDMSYPPQMLFVENVVGF 126
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 192
E SDTH +++E+L++ ++ TQEFILSPLQFGVPYSRPRYFCLAKR+P+ FR +NN+LL
Sbjct: 127 EVSDTHDQLLEVLSSLNFNTQEFILSPLQFGVPYSRPRYFCLAKREPVRFRHAFVNNKLL 186
Query: 193 RSPSPLLGNDDMTVITKHDQPDDSWDKLLES-CDPVERFLEFSNSGDQVNTETGFLSTGT 251
++P L +T+ + D ++ LE C P++ FL G
Sbjct: 187 QTPMCL----SLTLSSTSQGSDHQTEEELEPVCKPIKDFLVKEADG-------------- 228
Query: 252 AAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVK 311
G +ETV D ++VP++LIERWG+AMDIVYP+ KRCCCFTKSYYRYVK
Sbjct: 229 ------GTPDETVLQD-------YMVPVNLIERWGNAMDIVYPEFKRCCCFTKSYYRYVK 275
Query: 312 GTGSLLATVQ----PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYA 367
GTGSLLAT + P+ K + SSLKE LR+FTPREVAN HSFP +F FP H+SLRQ+YA
Sbjct: 276 GTGSLLATSKNLNVPEEKLQISSLKELGLRFFTPREVANFHSFPSNFCFPDHISLRQQYA 335
Query: 368 LLGNSLSIAVVAPLLQYLFAQA 389
+LGNSLSIAVV PLL YLFA+A
Sbjct: 336 MLGNSLSIAVVGPLLHYLFAEA 357
>gi|353259789|gb|AEQ76841.1| DNA methyltransferase [Triticum aestivum]
Length = 373
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/386 (61%), Positives = 281/386 (72%), Gaps = 28/386 (7%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
WRVLEFYSGIGGMRYSL + V A+VVEAFDIND ANDVYE NFGHRP QGNIQ LTA +
Sbjct: 7 WRVLEFYSGIGGMRYSLASSGVRAEVVEAFDINDVANDVYEHNFGHRPCQGNIQTLTAGD 66
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
LD Y AHAWLLSPPCQPYTRQGLQK+S+DARAFSF+KIL L+ + PP MLFVENVVGF
Sbjct: 67 LDKYKAHAWLLSPPCQPYTRQGLQKRSADARAFSFIKILNLMQNMSFPPQMLFVENVVGF 126
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 192
E SDTH +++ +L+ + TQEFILSPLQFGVPYSRPRYFCLAK++ + F +N++LL
Sbjct: 127 EVSDTHDQLLAVLSTLSFNTQEFILSPLQFGVPYSRPRYFCLAKQESMCFPNPSVNDKLL 186
Query: 193 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTA 252
R+P+ L N T + D + D L C+P+ FLE + GD+ +A
Sbjct: 187 RTPTCLTLNTTRT----QNSYDQNEDDLEVVCNPIRNFLEAQSIGDK---------ESSA 233
Query: 253 AVDDFGAAEETVEVDRCVSID----HFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYR 308
+ F E D C I+ + VPLSLIERWG+AMDIVYP+SKRCCCFTKSYYR
Sbjct: 234 IISGFK------EADGCTPIETASHDYTVPLSLIERWGNAMDIVYPESKRCCCFTKSYYR 287
Query: 309 YVKGTGSLLATVQ-----PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLR 363
YVKGTGS+L T + PK + SSL E LR+FTPREVANLHSFP F+FP +SLR
Sbjct: 288 YVKGTGSVLVTSKSLKPVPKENLEMSSLSELGLRFFTPREVANLHSFPPSFRFPDQISLR 347
Query: 364 QRYALLGNSLSIAVVAPLLQYLFAQA 389
Q+YA+LGNSLSIAVVAPLL YLFA+
Sbjct: 348 QQYAMLGNSLSIAVVAPLLCYLFAET 373
>gi|357135492|ref|XP_003569343.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like isoform
2 [Brachypodium distachyon]
Length = 374
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/383 (62%), Positives = 285/383 (74%), Gaps = 23/383 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
WRVLEFYSGIGGMRYSL + V A+VVEAFDIND ANDVYE NFGHRP QGNIQ LTA++
Sbjct: 7 WRVLEFYSGIGGMRYSLTASGVQAEVVEAFDINDVANDVYEHNFGHRPCQGNIQTLTASD 66
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
LD Y AHAWLLSPPCQPYTRQGLQK S+DARAFSF+KIL L+ + PP +LFVENVVGF
Sbjct: 67 LDKYKAHAWLLSPPCQPYTRQGLQKHSADARAFSFIKILNLMSNMRFPPQVLFVENVVGF 126
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 192
E SDTH +++E+L+ ++ TQEFILSPLQFGVPYSRPRYFCLAK++ + F+ N +LL
Sbjct: 127 EVSDTHDQLLEVLSILNFNTQEFILSPLQFGVPYSRPRYFCLAKQESMCFQNASANKKLL 186
Query: 193 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFS--NSGDQVNTETGFLSTG 250
+P+ L N T + D + D+L +C ++ FLE N GDQ +G +S
Sbjct: 187 WTPTCLKFNS-----TTQNSYDQNEDELEIACRSIKDFLETQSINIGDQ--DCSGTISAF 239
Query: 251 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 310
A D ETV D ++VPL+LIERWG+AMDIVYP+SKRCCCFTKSYYRYV
Sbjct: 240 KEA--DGCTPSETVSQD-------YIVPLNLIERWGNAMDIVYPESKRCCCFTKSYYRYV 290
Query: 311 KGTGSLLATVQ-----PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
KGTGSLLAT + PK + SSL E LR+FTPREVANLHSFP F FP H+SLRQ+
Sbjct: 291 KGTGSLLATSKNLKPIPKENLEISSLNELRLRFFTPREVANLHSFPSSFCFPDHISLRQQ 350
Query: 366 YALLGNSLSIAVVAPLLQYLFAQ 388
YA+LGNSLS+AVVAPLL YLF++
Sbjct: 351 YAMLGNSLSVAVVAPLLHYLFSE 373
>gi|357135490|ref|XP_003569342.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like isoform
1 [Brachypodium distachyon]
Length = 359
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/381 (60%), Positives = 278/381 (72%), Gaps = 34/381 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
WRVLEFYSGIGGMRYSL + V A+VVEAFDIND ANDVYE NFGHRP QGNIQ LTA++
Sbjct: 7 WRVLEFYSGIGGMRYSLTASGVQAEVVEAFDINDVANDVYEHNFGHRPCQGNIQTLTASD 66
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
LD Y AHAWLLSPPCQPYTRQGLQK S+DARAFSF+KIL L+ + PP +LFVENVVGF
Sbjct: 67 LDKYKAHAWLLSPPCQPYTRQGLQKHSADARAFSFIKILNLMSNMRFPPQVLFVENVVGF 126
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 192
E SDTH +++E+L+ ++ TQEFILSPLQFGVPYSRPRYFCLAK++ + F+ N +LL
Sbjct: 127 EVSDTHDQLLEVLSILNFNTQEFILSPLQFGVPYSRPRYFCLAKQESMCFQNASANKKLL 186
Query: 193 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTA 252
+P+ L N T + D + D+L +C ++ FLE Q+ G + T
Sbjct: 187 WTPTCLKFNS-----TTQNSYDQNEDELEIACRSIKDFLE-----TQIKEADGCTPSETV 236
Query: 253 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 312
+ D ++VPL+LIERWG+AMDIVYP+SKRCCCFTKSYYRYVKG
Sbjct: 237 SQD-------------------YIVPLNLIERWGNAMDIVYPESKRCCCFTKSYYRYVKG 277
Query: 313 TGSLLATVQ-----PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYA 367
TGSLLAT + PK + SSL E LR+FTPREVANLHSFP F FP H+SLRQ+YA
Sbjct: 278 TGSLLATSKNLKPIPKENLEISSLNELRLRFFTPREVANLHSFPSSFCFPDHISLRQQYA 337
Query: 368 LLGNSLSIAVVAPLLQYLFAQ 388
+LGNSLS+AVVAPLL YLF++
Sbjct: 338 MLGNSLSVAVVAPLLHYLFSE 358
>gi|194706928|gb|ACF87548.1| unknown [Zea mays]
gi|413950581|gb|AFW83230.1| hypothetical protein ZEAMMB73_174249 [Zea mays]
gi|413950582|gb|AFW83231.1| hypothetical protein ZEAMMB73_174249 [Zea mays]
Length = 334
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/365 (60%), Positives = 266/365 (72%), Gaps = 36/365 (9%)
Query: 30 MKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPPCQP 89
M + V A+VVEAFDIND ANDVYE NFGHRP QGNIQ LTA++LD Y AHAWLLSPPCQP
Sbjct: 1 MASGVRAEVVEAFDINDVANDVYEHNFGHRPCQGNIQTLTASDLDKYKAHAWLLSPPCQP 60
Query: 90 YTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSD 149
YTRQGLQK S+DARAFSF+KIL L+ PP MLFVENVVGFE SDTH +++E+L++ +
Sbjct: 61 YTRQGLQKHSADARAFSFIKILNLMQDMSYPPQMLFVENVVGFEVSDTHDQLLEVLSSLN 120
Query: 150 YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITK 209
+ TQEFILSPLQFGVPYSRPRYFCLAKR+P+ FR +NN+LL++P L +T+ +
Sbjct: 121 FNTQEFILSPLQFGVPYSRPRYFCLAKREPVRFRHAFVNNKLLQTPMCL----SLTLSST 176
Query: 210 HDQPDDSWDKLLES-CDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDR 268
D ++ LE C P++ FL G G +ETV D
Sbjct: 177 SQGSDHQTEEELEPVCKPIKDFLVKEADG--------------------GTPDETVLQD- 215
Query: 269 CVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ----PKN 324
++VP++LIERWG+AMDIVYP+ KRCCCFTKSYYRYVKGTGSLLAT + P+
Sbjct: 216 ------YMVPVNLIERWGNAMDIVYPEFKRCCCFTKSYYRYVKGTGSLLATSKNLNVPEE 269
Query: 325 KGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQY 384
K + SSLKE LR+FTPREVAN HSFP +F FP H+SLRQ+YA+LGNSLSIAVV PLL Y
Sbjct: 270 KLQISSLKELGLRFFTPREVANFHSFPSNFCFPDHISLRQQYAMLGNSLSIAVVGPLLHY 329
Query: 385 LFAQA 389
LFA+A
Sbjct: 330 LFAEA 334
>gi|147856667|emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]
Length = 1148
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/295 (69%), Positives = 237/295 (80%), Gaps = 4/295 (1%)
Query: 1 MEKDMCKNDGE-AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR 59
MEK +C GE WRVLEFYSGIGGMRYSL + V+A++VEAFDIN+ ANDVY+ NFGHR
Sbjct: 851 MEKGLCNPQGEDPWRVLEFYSGIGGMRYSLKRGGVNAKIVEAFDINNIANDVYQHNFGHR 910
Query: 60 PYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
PYQGNIQ+LTAA+LD Y AHAWLLSPPCQPYTRQGLQK S DARAFSFLKILELI HT+
Sbjct: 911 PYQGNIQSLTAADLDRYRAHAWLLSPPCQPYTRQGLQKHSGDARAFSFLKILELIQHTLH 970
Query: 120 PPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKP 179
PP +LFVENVVGFETSDTH KMIEIL+ + ++TQEFILSP+QFGVPYSRPRYFCLAKRKP
Sbjct: 971 PPLILFVENVVGFETSDTHEKMIEILSKTGFVTQEFILSPIQFGVPYSRPRYFCLAKRKP 1030
Query: 180 LSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQ 239
SF QL NNQLL +PSPL G++D ++I +HDQ + WDKLL+SC+PV RFLEF N+ +
Sbjct: 1031 SSFENQLFNNQLLSTPSPLFGHEDDSLIDEHDQSEKIWDKLLQSCEPVXRFLEFKNTINP 1090
Query: 240 VNTETGFLSTGTAAVDDFGAAEETVEVDR--CVSIDHFLVPLSLIERWGSAMDIV 292
+ TE+ +L T + + D G E E DR S D F VPLSLIERWGSAM I+
Sbjct: 1091 LETESSYLETLSVSTDASGELENN-ERDRSDSNSWDQFSVPLSLIERWGSAMGIL 1144
>gi|222618843|gb|EEE54975.1| hypothetical protein OsJ_02581 [Oryza sativa Japonica Group]
Length = 353
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/386 (56%), Positives = 263/386 (68%), Gaps = 48/386 (12%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
W+VLEFYSGIGGMRYSL + A+VVEAFDIND ANDVYELNFGHRPYQGNIQ LTA++
Sbjct: 7 WKVLEFYSGIGGMRYSLAASGARAEVVEAFDINDVANDVYELNFGHRPYQGNIQTLTASD 66
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
LD Y A AWLLSPPCQPYTRQGLQK S+DARAFSF+KIL L+ + PP MLFVENVVGF
Sbjct: 67 LDKYKAQAWLLSPPCQPYTRQGLQKHSADARAFSFIKILNLMKNMCFPPQMLFVENVVGF 126
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 192
E SDTH ++IE+L++ ++ TQEFILSPLQFG+PYSRPRYFCLAKR+P+SF+ N++LL
Sbjct: 127 EVSDTHDQLIEVLSDLNFNTQEFILSPLQFGIPYSRPRYFCLAKREPVSFQNPSDNSKLL 186
Query: 193 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTA 252
R+P+ L V H++ + D+L C P+ FLE +S A
Sbjct: 187 RTPTFL-----TLVRAGHNRCNPDEDELELVCKPISDFLE-------------TISLNVA 228
Query: 253 AVDDFGAAEETVEVDRC----VSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYR 308
D G + D C + ++VPL+LIER YYR
Sbjct: 229 DQDSSGTISDINGSDGCTPSGIISQDYVVPLNLIER---------------------YYR 267
Query: 309 YVKGTGSLLATVQ-----PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLR 363
YVKGTGSLLAT K + SSLKE LR+FTPREVANLHSFP F FP+H+SLR
Sbjct: 268 YVKGTGSLLATSNNLKRISKEDLEISSLKELGLRFFTPREVANLHSFPSSFHFPNHISLR 327
Query: 364 QRYALLGNSLSIAVVAPLLQYLFAQA 389
Q+YA+LGNSLS+AVV PLL+YLFA+
Sbjct: 328 QQYAMLGNSLSVAVVGPLLRYLFAET 353
>gi|218188646|gb|EEC71073.1| hypothetical protein OsI_02832 [Oryza sativa Indica Group]
Length = 353
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/387 (57%), Positives = 264/387 (68%), Gaps = 50/387 (12%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
W+VLEFYSGIGGMRYSL + A+VVEAFDIND ANDVYELNFGHRPYQGNIQ LTA++
Sbjct: 7 WKVLEFYSGIGGMRYSLAASGARAEVVEAFDINDVANDVYELNFGHRPYQGNIQTLTASD 66
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
LD Y A AWLLSPPCQPYTRQGLQK S+DARAFSF+KIL L+ + PP MLFVENVVGF
Sbjct: 67 LDKYKAQAWLLSPPCQPYTRQGLQKHSADARAFSFIKILNLMKNMCFPPQMLFVENVVGF 126
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 192
E SDTH ++IE+L++ ++ TQEFILSPLQFG+PYSRPRYFCLAKR+P+SF+ N++LL
Sbjct: 127 EVSDTHDQLIEVLSDLNFNTQEFILSPLQFGIPYSRPRYFCLAKREPVSFQNPSDNSKLL 186
Query: 193 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTA 252
R+P+ L V H++ + D+L C P+ FLE S A
Sbjct: 187 RTPTFL-----TLVRAGHNRCNPDEDELELVCKPISDFLETR-------------SLNVA 228
Query: 253 AVDDFGAAEETVEVDRC-----VSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYY 307
D G + D C +S D ++VPL+LIER YY
Sbjct: 229 DQDSSGTISDINGSDGCTPSGIISQD-YVVPLNLIER---------------------YY 266
Query: 308 RYVKGTGSLLATVQ-----PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSL 362
RYVKGTGSLLAT K + SSLKE LR+FTPREVANLHSFP F FP+H+SL
Sbjct: 267 RYVKGTGSLLATSNNLKRISKEDLEISSLKELGLRFFTPREVANLHSFPSSFHFPNHISL 326
Query: 363 RQRYALLGNSLSIAVVAPLLQYLFAQA 389
RQ+YA+LGNSLS+AVV PLL+YLFA+
Sbjct: 327 RQQYAMLGNSLSVAVVGPLLRYLFAET 353
>gi|356528743|ref|XP_003532958.1| PREDICTED: LOW QUALITY PROTEIN: tRNA
(cytosine-5-)-methyltransferase-like [Glycine max]
Length = 348
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/333 (62%), Positives = 250/333 (75%), Gaps = 12/333 (3%)
Query: 64 NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHM 123
NI+ LTAA+LD YGA AWLLSPPCQPYTRQGLQK + DARAFSFL+ILEL+P ++PP M
Sbjct: 19 NIKCLTAADLDKYGADAWLLSPPCQPYTRQGLQKDTGDARAFSFLQILELMPFLLRPPSM 78
Query: 124 LFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
LFVENVVGFETSDTHAK+IEIL ++++TQEFIL+PLQFG+PYSRPRYFCLAKRKP SF
Sbjct: 79 LFVENVVGFETSDTHAKLIEILEKTNFITQEFILTPLQFGIPYSRPRYFCLAKRKPSSFV 138
Query: 184 CQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTE 243
+ LNN L++S PL G+ D TV + + LL+SC P+E+F+E N + + E
Sbjct: 139 NECLNNLLIQSSPPLFGHFD-TVADDDNSSKEDRQNLLQSCQPIEKFIELKNLSNDIAVE 197
Query: 244 TGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFT 303
+ L T + +D S+D + + SLI+RWGSAMD+VYPDSKRCCCFT
Sbjct: 198 SEALRTDLS--NDAPRTLGENNGHEYESLDQYYIHPSLIDRWGSAMDVVYPDSKRCCCFT 255
Query: 304 KSYYRYVKGTGSLLAT--------VQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQ 355
KSYYRYVKGTGSLLA VQP + K +SLKEQ LRYFTPREVANLHS P +F+
Sbjct: 256 KSYYRYVKGTGSLLAKLSRXEFYLVQPVKRDK-TSLKEQCLRYFTPREVANLHSSPEEFE 314
Query: 356 FPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
FP H+SL+QRYALLGNSLSIAVVAPLL YLF +
Sbjct: 315 FPEHISLKQRYALLGNSLSIAVVAPLLLYLFTE 347
>gi|413950580|gb|AFW83229.1| hypothetical protein ZEAMMB73_174249 [Zea mays]
Length = 310
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/341 (59%), Positives = 244/341 (71%), Gaps = 36/341 (10%)
Query: 30 MKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPPCQP 89
M + V A+VVEAFDIND ANDVYE NFGHRP QGNIQ LTA++LD Y AHAWLLSPPCQP
Sbjct: 1 MASGVRAEVVEAFDINDVANDVYEHNFGHRPCQGNIQTLTASDLDKYKAHAWLLSPPCQP 60
Query: 90 YTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSD 149
YTRQGLQK S+DARAFSF+KIL L+ PP MLFVENVVGFE SDTH +++E+L++ +
Sbjct: 61 YTRQGLQKHSADARAFSFIKILNLMQDMSYPPQMLFVENVVGFEVSDTHDQLLEVLSSLN 120
Query: 150 YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITK 209
+ TQEFILSPLQFGVPYSRPRYFCLAKR+P+ FR +NN+LL++P L +T+ +
Sbjct: 121 FNTQEFILSPLQFGVPYSRPRYFCLAKREPVRFRHAFVNNKLLQTPMCL----SLTLSST 176
Query: 210 HDQPDDSWDKLLES-CDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDR 268
D ++ LE C P++ FL G G +ETV D
Sbjct: 177 SQGSDHQTEEELEPVCKPIKDFLVKEADG--------------------GTPDETVLQD- 215
Query: 269 CVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ----PKN 324
++VP++LIERWG+AMDIVYP+ KRCCCFTKSYYRYVKGTGSLLAT + P+
Sbjct: 216 ------YMVPVNLIERWGNAMDIVYPEFKRCCCFTKSYYRYVKGTGSLLATSKNLNVPEE 269
Query: 325 KGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
K + SSLKE LR+FTPREVAN HSFP +F FP H+SLRQ+
Sbjct: 270 KLQISSLKELGLRFFTPREVANFHSFPSNFCFPDHISLRQQ 310
>gi|168036438|ref|XP_001770714.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678075|gb|EDQ64538.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/381 (52%), Positives = 251/381 (65%), Gaps = 37/381 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
RVLEFYSGIGG+RYSL +A V A VVEAFDIN+ ANDVYE NFGHRP Q NIQ LT ++L
Sbjct: 9 RVLEFYSGIGGLRYSLQEAGVEAVVVEAFDINEVANDVYEHNFGHRPSQRNIQRLTVSQL 68
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
D Y A W++SPPCQPYTRQGL+K + DARAFSFL++LE++P PP+ + VENVVGFE
Sbjct: 69 DAYKADTWIMSPPCQPYTRQGLRKDAGDARAFSFLQMLEMLPQMKFPPNYILVENVVGFE 128
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLR 193
S TH +I++ + ++TQEFILSPLQ G+PYSRPRYFCLAK+KP SF NN LL
Sbjct: 129 DSITHGHLIDMFEDLGFMTQEFILSPLQLGIPYSRPRYFCLAKKKPKSFVQPAYNNSLLC 188
Query: 194 SPSPLLGNDDMTVITKHDQPDDSWDKLLES---CDPVERFLEFSNSGDQVNTETGFLSTG 250
PL + K ++P +++ C PV F+E E S
Sbjct: 189 ELGPL-------PLLKMNEP------IIDPGVYCRPVSDFME----------EEPCTSDN 225
Query: 251 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 310
D + E+ + +P S++ERWG D+V DSKRCCCFTKSY Y
Sbjct: 226 LGKCFDMNMCADKWEL--------YKLPSSVLERWGDCFDMVTKDSKRCCCFTKSYGSYA 277
Query: 311 KGTGSLLAT---VQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYA 367
KGTGS+L+T + ++ + SL LRYFTPREVANLHSFP +F FP +SL+QRYA
Sbjct: 278 KGTGSVLSTKKALMTQDLPEGVSLNSLGLRYFTPREVANLHSFPPEFSFPSQVSLKQRYA 337
Query: 368 LLGNSLSIAVVAPLLQYLFAQ 388
LLGNSLS+AVV LL+YLF++
Sbjct: 338 LLGNSLSVAVVGVLLRYLFSE 358
>gi|302789792|ref|XP_002976664.1| hypothetical protein SELMODRAFT_105635 [Selaginella moellendorffii]
gi|300155702|gb|EFJ22333.1| hypothetical protein SELMODRAFT_105635 [Selaginella moellendorffii]
Length = 334
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/379 (52%), Positives = 240/379 (63%), Gaps = 51/379 (13%)
Query: 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
G RVLEFYSGIGG+R+SL +A + A VVEAF+IN+ ANDVYE NFGHRP QGNIQ L+
Sbjct: 5 GAPLRVLEFYSGIGGLRFSLEEAKIDATVVEAFEINELANDVYERNFGHRPNQGNIQRLS 64
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
++LD Y A AWLLSPPCQPYTRQGLQK S+DARA SFLK+L+ I PP +F+ENV
Sbjct: 65 VSDLDKYEADAWLLSPPCQPYTRQGLQKDSADARASSFLKLLDTISSLSIPPAHVFIENV 124
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 189
VGFETS T +++I++L ++ + QE I++PLQFG+PYSRPRYFCLAKR+P F LN
Sbjct: 125 VGFETSHTRSQLIKVLEDTGFRIQECIINPLQFGIPYSRPRYFCLAKREPFQFSRSDLNG 184
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249
QL+ P N D V TK V +LE N D
Sbjct: 185 QLVSCPFDFSTNRDFHVETKT----------------VGEYLE--NPSD----------- 215
Query: 250 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 309
++ ++VP + I RWG A DIV PDS RCCCFTKSY RY
Sbjct: 216 ---------------------CMEDYMVPSTTIARWGEAYDIVTPDSGRCCCFTKSYARY 254
Query: 310 VKGTGSLLA-TVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYAL 368
KGTGS+L + P + L+ LRYFTPREVAN HSFP F FP HLS++QRYAL
Sbjct: 255 AKGTGSILYFSKDPAELSDLAWLQSAGLRYFTPREVANFHSFPKGFDFPDHLSIKQRYAL 314
Query: 369 LGNSLSIAVVAPLLQYLFA 387
LGNSL+I VV LL YLF+
Sbjct: 315 LGNSLNIKVVGYLLNYLFS 333
>gi|302782830|ref|XP_002973188.1| hypothetical protein SELMODRAFT_98974 [Selaginella moellendorffii]
gi|300158941|gb|EFJ25562.1| hypothetical protein SELMODRAFT_98974 [Selaginella moellendorffii]
Length = 334
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/379 (52%), Positives = 238/379 (62%), Gaps = 55/379 (14%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
RVLEFYSGIGG+R+SL +A + A VVE F+IN+ ANDVYE NFGHRP QGNIQ L+ ++L
Sbjct: 5 RVLEFYSGIGGLRFSLEEAKIDAMVVEVFEINELANDVYERNFGHRPNQGNIQRLSVSDL 64
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
D Y A AWLLSPPCQPYTRQGLQK S+DARA SFLK+L+ I PP +F+ENVVGFE
Sbjct: 65 DKYEADAWLLSPPCQPYTRQGLQKDSADARASSFLKLLDTISSLSIPPTHVFIENVVGFE 124
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLR 193
TS T +++I++L ++ + QE I++PLQFG+PYSRPRYFCLAKR+P F LN QL+
Sbjct: 125 TSHTRSQLIKVLEDTGFRIQECIINPLQFGIPYSRPRYFCLAKREPFQFSRSDLNGQLVS 184
Query: 194 SPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAA 253
P N D V TK V +LE N+ D
Sbjct: 185 CPFDFSTNRDFHVETK----------------TVGEYLE--NASD--------------- 211
Query: 254 VDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGT 313
+ ++VP + I RWG A DIV PDS RCCCFTKSY RY KGT
Sbjct: 212 -----------------CTEDYMVPSTTIARWGEAYDIVTPDSGRCCCFTKSYARYAKGT 254
Query: 314 GSLLAT-----VQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYAL 368
GS+L T P + L+ LRYFTPREVAN HSFP F FP HLS++QRYAL
Sbjct: 255 GSILVTNPSFYKDPAELSDLTWLQSAGLRYFTPREVANFHSFPKGFDFPDHLSIKQRYAL 314
Query: 369 LGNSLSIAVVAPLLQYLFA 387
LGNSL+I VV LL YLF+
Sbjct: 315 LGNSLNIKVVGYLLNYLFS 333
>gi|294463393|gb|ADE77228.1| unknown [Picea sitchensis]
Length = 380
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 191/367 (52%), Positives = 240/367 (65%), Gaps = 54/367 (14%)
Query: 7 KNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ 66
K + E +RVLEFYSGIGGMR+SL ++ + A+VVEAFDIN+ AN+VY+ NFGH PYQGNIQ
Sbjct: 6 KREDEPFRVLEFYSGIGGMRFSLEQSGIHAKVVEAFDINNIANEVYKHNFGHSPYQGNIQ 65
Query: 67 NLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
+LTA++LD + A+AWLLSPPCQPYTRQGLQK + DARA+SF+KILELIP T+ PP MLFV
Sbjct: 66 SLTASQLDKFRANAWLLSPPCQPYTRQGLQKDAEDARAYSFMKILELIPLTLFPPTMLFV 125
Query: 127 ENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
ENVVGFE+S TH +M+E+L ++TQEFILSPLQF VPYSRPRYFCLAK+ L F
Sbjct: 126 ENVVGFESSITHKRMMEVLEKIGFITQEFILSPLQFYVPYSRPRYFCLAKKAALPFPRPE 185
Query: 187 LNNQLLRSPSPLLG--NDDMTVITKHDQPDDSWDKLLE---SCDPVERFLE--------- 232
N +L+ PL+ +D++ +T Q ++ + L+ SC P++ FL+
Sbjct: 186 FNGKLVTHIGPLISGEDDNLLNVTFECQMENVNEVELDTNSSCRPIKDFLQADILRSDRF 245
Query: 233 --------------FSNSGDQVNTETGFLSTGTAAVD---------DF-GAAE-ETVEV- 266
+N + +E G +D DF G A+ + VEV
Sbjct: 246 GCTEMNSSTTSHEILANKEARDESEDHHAKRGCCRIDGKEVLVCSRDFAGQADCDNVEVI 305
Query: 267 ------------DRCVS--IDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 312
DRC + + F VP SLIERWG AMDIV+PDSKRCCCFTKSY RYVKG
Sbjct: 306 TENRSNIPFESKDRCRNSEWEQFRVPASLIERWGDAMDIVFPDSKRCCCFTKSYGRYVKG 365
Query: 313 TGSLLAT 319
TGSLLAT
Sbjct: 366 TGSLLAT 372
>gi|384251331|gb|EIE24809.1| S-adenosyl-L-methionine-dependent methyltransferase [Coccomyxa
subellipsoidea C-169]
Length = 414
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 184/424 (43%), Positives = 242/424 (57%), Gaps = 63/424 (14%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ R +EFYSGIGGM Y L +A +AQVV AFD+N ANDVYE NFG RP+QGN++ ++A
Sbjct: 5 QGLRAVEFYSGIGGMHYGLQQACPTAQVVAAFDLNGVANDVYEHNFGWRPWQGNLEGVSA 64
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ LD + A WL++PPCQP+TR+GLQ+ +D R+ SFLK++ ++P PP + VENVV
Sbjct: 65 SVLDGFNAQLWLMAPPCQPFTRRGLQQDVADPRSASFLKLISILPSLRHPPQYVIVENVV 124
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC------ 184
GFE S ++ L+ + QEF+LSPLQ G+PYSRPRY+ LA+++ S C
Sbjct: 125 GFEASSMRKQLAAGLSAAGLDMQEFLLSPLQLGIPYSRPRYYALARQRTPSGACPFPTAP 184
Query: 185 ------------QLLNNQLLRSPSPL-------------------LGNDDMTVITKHDQP 213
LL + P P LG D +T
Sbjct: 185 LPDAQPFCCPANSLLPHASKSVPPPASAECSSTQNNGNCSAGESSLGGD----LTPQSAT 240
Query: 214 DDSWDKLLESCDPVERFL-EFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSI 272
+S ++ ++ P+ FL E + D N+ L G+ A D A E+ E D VS
Sbjct: 241 QNSRAEVSKALLPIAAFLVERPSPVDGANS----LQAGSNASDAGDGALES-EADGPVSN 295
Query: 273 ----------DHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQP 322
D F VP ++IE+WG +DIV P S+RC CFTK+Y RY KG+GS LAT
Sbjct: 296 AATEESEAPEDFFWVPDNVIEQWGEVLDIVVPSSQRCNCFTKTYTRYTKGSGSQLATR-- 353
Query: 323 KNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLL 382
L+ LRYFTPRE+ANLHSFP F FP H++LRQRYALLGNSLS VVA LL
Sbjct: 354 ----SLDLLRAMRLRYFTPREIANLHSFPAGFSFPAHVTLRQRYALLGNSLSALVVADLL 409
Query: 383 QYLF 386
+YL
Sbjct: 410 RYLL 413
>gi|388521015|gb|AFK48569.1| unknown [Lotus japonicus]
Length = 230
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/218 (69%), Positives = 179/218 (82%), Gaps = 1/218 (0%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+VLEFYSGIGGMRYSL+KA V+A+VVEAF+IND ANDVY+ NF HRPYQGNIQ LTAA+L
Sbjct: 6 KVLEFYSGIGGMRYSLVKAQVNAEVVEAFEINDTANDVYQHNFAHRPYQGNIQCLTAADL 65
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
D YG AWLLSPPCQPYTRQGLQK + DARAFSFL+ILEL+P +PP MLFVENVVGFE
Sbjct: 66 DKYGTDAWLLSPPCQPYTRQGLQKDTGDARAFSFLQILELMPSLSRPPSMLFVENVVGFE 125
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLR 193
TSDTHAK+IEIL ++++TQEFILSPLQFG+PYSRPRYFCLAKRKP SF +L N+QL++
Sbjct: 126 TSDTHAKLIEILEKTNFVTQEFILSPLQFGIPYSRPRYFCLAKRKPSSFVNELFNSQLIQ 185
Query: 194 SPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFL 231
SP PL + T++ + + KLL+SC + FL
Sbjct: 186 SPRPLFEHFG-TLVNEDSSLQEDRHKLLQSCQLLRNFL 222
>gi|242058009|ref|XP_002458150.1| hypothetical protein SORBIDRAFT_03g027700 [Sorghum bicolor]
gi|241930125|gb|EES03270.1| hypothetical protein SORBIDRAFT_03g027700 [Sorghum bicolor]
Length = 233
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/220 (66%), Positives = 172/220 (78%), Gaps = 7/220 (3%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
WRVLEFYSGIGGMRYSLM + V A+VVEAFDIND ANDVYE NFGHRP QGNIQ LTA++
Sbjct: 7 WRVLEFYSGIGGMRYSLMASGVRAEVVEAFDINDVANDVYEHNFGHRPCQGNIQTLTASD 66
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
LD Y AHAWLLSPPCQPYTRQGLQK S+DARAFSF+KIL L+ PP MLFVENVVGF
Sbjct: 67 LDKYKAHAWLLSPPCQPYTRQGLQKHSADARAFSFIKILNLMQDMSYPPQMLFVENVVGF 126
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 192
E SDTH +++E+L++ ++ TQEFILSPLQFGVPYSRPRYFCLAKR+P+ FR +NN+LL
Sbjct: 127 EVSDTHDQLLEVLSSLNFNTQEFILSPLQFGVPYSRPRYFCLAKREPMRFRNASVNNKLL 186
Query: 193 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLE 232
++P L MT+ + D ++ LE PV +E
Sbjct: 187 QTPMCL----SMTLNSTSQGSDHQTEEELE---PVLNLIE 219
>gi|42766604|gb|AAS45432.1| At5g25480 [Arabidopsis thaliana]
Length = 176
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 132/167 (79%), Positives = 146/167 (87%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQN 67
N+ + W+VLEFYSGIGGMRYSLM + + ++VVEAF+IND ANDVY+ NF HRPYQGNIQ+
Sbjct: 10 NEKKPWQVLEFYSGIGGMRYSLMASGIVSEVVEAFEINDSANDVYQHNFKHRPYQGNIQS 69
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
LTAA+LD Y A AWLLSPPCQPYTRQGLQK S DARAFSFL+ILELIPHT KPP MLFVE
Sbjct: 70 LTAADLDKYNADAWLLSPPCQPYTRQGLQKHSGDARAFSFLRILELIPHTTKPPQMLFVE 129
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 174
NVVGFETSDTH +MI L DY+TQEFILSPLQFGVPYSRPRYFCL
Sbjct: 130 NVVGFETSDTHMEMIGTLTKLDYVTQEFILSPLQFGVPYSRPRYFCL 176
>gi|413950583|gb|AFW83232.1| hypothetical protein ZEAMMB73_174249 [Zea mays]
Length = 172
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/164 (76%), Positives = 142/164 (86%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
WRVLEFYSGIGG+RYSLM + V A+VVEAFDIND ANDVYE NFGHRP QGNIQ LTA++
Sbjct: 7 WRVLEFYSGIGGLRYSLMASGVRAEVVEAFDINDVANDVYEHNFGHRPCQGNIQTLTASD 66
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
LD Y AHAWLLSPPCQPYTRQGLQK S+DARAFSF+KIL L+ PP MLFVENVVGF
Sbjct: 67 LDKYKAHAWLLSPPCQPYTRQGLQKHSADARAFSFIKILNLMQDMSYPPQMLFVENVVGF 126
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
E SDTH +++E+L++ ++ TQEFILSPLQFGVPYSRPRYFCL +
Sbjct: 127 EVSDTHDQLLEVLSSLNFNTQEFILSPLQFGVPYSRPRYFCLVR 170
>gi|255081819|ref|XP_002508128.1| DNA methyltransferase [Micromonas sp. RCC299]
gi|226523404|gb|ACO69386.1| DNA methyltransferase [Micromonas sp. RCC299]
Length = 404
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 159/388 (40%), Positives = 207/388 (53%), Gaps = 52/388 (13%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
R +EFY G+GG+ YSL++A A+VV AFDIN NDVYE NFG RP Q NI L A
Sbjct: 32 RAVEFYCGVGGLHYSLLRARPDAKVVAAFDINPNGNDVYEHNFGVRPSQKNIYGLPVASF 91
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKIL-ELIPHTVKPPHMLFVENVVGF 132
D A WLLSPPCQP+TRQG +K D R+ SFL++L +++P PP + VENVVGF
Sbjct: 92 DRLDAGLWLLSPPCQPFTRQGHRKDKDDGRSQSFLRLLRDVVPQLRSPPTHVLVENVVGF 151
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 192
ETSDT A I + Y T+EF+L+P FGVPYSRPRYF LAK +R +
Sbjct: 152 ETSDTRADAIAVFRRLGYDTREFMLTPRMFGVPYSRPRYFLLAKN---GYRA---GRRAS 205
Query: 193 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTA 252
PS P + G +V L+ T
Sbjct: 206 YQPS-------------------------SRATPRRSLTRGTGLGGEVGATVRRLNR-TP 239
Query: 253 AVDDFGAA---EETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 309
+ +G+ E + +V R ++ V + L A+D+V S +C CFTKSY +Y
Sbjct: 240 PITPYGSRDVNEGSADVFREYAVAERDVKIGL-----GAVDVVCRTSYKCNCFTKSYGKY 294
Query: 310 VKGTGSLL-----------ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPH 358
VKGTGS++ TV + + LRYFT E+A +HSFP DF FP
Sbjct: 295 VKGTGSMVTDKLVDKDSWDGTVASGGAHEGAEGGGVRLRYFTEGEIARMHSFPSDFSFPA 354
Query: 359 HLSLRQRYALLGNSLSIAVVAPLLQYLF 386
++ +QRYALLGNSLS+A VAPL+ +L
Sbjct: 355 GVTRQQRYALLGNSLSVACVAPLIDHLL 382
>gi|303285424|ref|XP_003062002.1| DNA methyltransferase [Micromonas pusilla CCMP1545]
gi|226456413|gb|EEH53714.1| DNA methyltransferase [Micromonas pusilla CCMP1545]
Length = 338
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 154/389 (39%), Positives = 203/389 (52%), Gaps = 82/389 (21%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH--RPYQGNIQNLTAA 71
R LEFY G+GG+ Y+L++A A V AFD+N A D Y NFG RP N+ + AA
Sbjct: 13 RALEFYCGVGGLHYALLRARPDATVAAAFDLNPHACDTYAFNFGDAARPIARNLASYPAA 72
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+D + A WLLSPPCQP+TRQG ++ D RA SFL++L+++P P L VENVVG
Sbjct: 73 SIDAHAASLWLLSPPCQPFTRQGAKRDVDDGRAESFLRLLDVVPTLANAPSHLLVENVVG 132
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQL 191
FE S+T ++ L Y T+E +LSP QFGVPYSRPRYFCLAKR
Sbjct: 133 FERSETRDALLATLRAMGYTTRERMLSPRQFGVPYSRPRYFCLAKR-------------- 178
Query: 192 LRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGT 251
+PL DD+ +H D+ D+
Sbjct: 179 ----APLRWVDDVFSGIEHGDDDEGADE-------------------------------- 202
Query: 252 AAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVK 311
GA T VP + + + ++ D+V D ++C CFTKSY +YVK
Sbjct: 203 ------GADVWTTHA----------VPRADVVKALASADVVTRDDRKCNCFTKSYGKYVK 246
Query: 312 GTGSLLATVQPKN--------KGKASSLKEQ------HLRYFTPREVANLHSFPGDFQFP 357
GTGS ++ V+ G+ + + LRYFT REVAN+HSFP +F FP
Sbjct: 247 GTGSFISDVRVVKGEWDGRIRNGQGADVSADDGGGSVRLRYFTEREVANVHSFPPEFTFP 306
Query: 358 HHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
H++ QRYALLGNSLS+A VAPL+ YL
Sbjct: 307 SHVTRAQRYALLGNSLSVACVAPLIDYLL 335
>gi|432964261|ref|XP_004086901.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Oryzias
latipes]
Length = 410
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 148/392 (37%), Positives = 204/392 (52%), Gaps = 26/392 (6%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLT 69
E RVLE YSGIGGM Y+L ++ V A+VV A DIN AN +Y+ NF P + +I+ LT
Sbjct: 2 ETVRVLELYSGIGGMHYALKESGVPAEVVAAVDINTMANQIYKHNFPDTPLWNKSIEGLT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ ++SPPCQP+TR GLQ SD R SFL IL L+P +PP + +ENV
Sbjct: 62 LEDFAGLSVDMVMMSPPCQPFTRIGLQGDVSDPRTKSFLHILHLLPRLHRPPRFILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 189
GFETS ++I L Y+ QE + SP G+P SR RYF +A+R + +
Sbjct: 122 KGFETSAARDRLINTLTECGYVFQEIMASPTSVGIPNSRLRYFLIARRSAENMNIHTGSK 181
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249
P DD+ +++K P E ++ TE
Sbjct: 182 VWDVCAQP--AEDDLALVSK---------AACSGTTPPEEKASHGLVLYKLETEMQLQRK 230
Query: 250 GTAAVD-DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYR 308
T + D ++ +E V+++ +L+P + R+ +DIV P S+R CFTK Y R
Sbjct: 231 TTQNSNPDVKQIQDFLEAGSQVNVEEYLLPPKTLLRYSLLLDIVQPTSRRSVCFTKGYGR 290
Query: 309 YVKGTGSLL-----ATVQP--------KNKGKASSLKEQHLRYFTPREVANLHSFPGDFQ 355
YV+GTGS+L VQ + + L LRYFTPREVANL FP F
Sbjct: 291 YVEGTGSVLQGCMDTEVQSVFTDLELLSEEDRLQRLMSLRLRYFTPREVANLMCFPPCFS 350
Query: 356 FPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
FP H+S QRY +LGNSL++ +VA L+Q LF+
Sbjct: 351 FPEHISTIQRYRVLGNSLNVLLVAKLVQLLFS 382
>gi|242253856|ref|NP_001156357.1| tRNA (cytosine-5-)-methyltransferase [Sus scrofa]
gi|226222432|gb|ACO38647.1| DNA methyltransferase 2 [Sus scrofa]
Length = 408
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 156/407 (38%), Positives = 222/407 (54%), Gaps = 47/407 (11%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSGIGGM +L ++ + AQVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 EPLRVLELYSGIGGMHQALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGVT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D + L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV
Sbjct: 62 LEEFDRLSFNMVLMSPPCQPFTRIGLQGDVTDPRTNSFLYILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 189
GFE S T +I+ + N + QEF+LSP G+P SR RYF +AK + F Q
Sbjct: 122 KGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPFPFQAPGQ 181
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPD--DSWDKLLESCDPVERFLEFSNSGDQVNTETGFL 247
L+ P + ++H Q D+ K+ E +ER + +S E
Sbjct: 182 VLMEFPQ---------MESEHPQKHAIDAQSKIEEK--KIERNICLDSSAQCSGKEAILF 230
Query: 248 STGTAAVDDF--------------GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVY 293
TA D G E+ ++++ +FL P SL+ R+ +DIV
Sbjct: 231 KLETAGEIDRKHQQDSDLSVQMLKGFLEDDIDMN-----SYFLPPKSLL-RYALLLDIVK 284
Query: 294 PDSKRCCCFTKSYYRYVKGTGSLLAT---VQPKNKGKA-SSLKEQH---------LRYFT 340
P S+R CFTK Y RY++GTGS+L T VQ +N K+ +SL + LR+FT
Sbjct: 285 PTSRRSMCFTKGYGRYIEGTGSVLQTSEDVQIENIYKSLTSLSPEEKIMKLLMLKLRFFT 344
Query: 341 PREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
P+E+ANL FP +F FP ++++QRY LLGNSL++ VVA L++ L+A
Sbjct: 345 PKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYA 391
>gi|260796005|ref|XP_002592995.1| hypothetical protein BRAFLDRAFT_275730 [Branchiostoma floridae]
gi|229278219|gb|EEN49006.1| hypothetical protein BRAFLDRAFT_275730 [Branchiostoma floridae]
Length = 386
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/392 (38%), Positives = 216/392 (55%), Gaps = 39/392 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAE 72
RV+EFYSG+GGM Y+++++ V A VV A DIN AN VY NF H Q +I + E
Sbjct: 12 RVVEFYSGVGGMHYAVLESKVPATVVAALDINTTANAVYRHNFPHVNLLQRDITGIKLPE 71
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
+ A +++SPPCQP+TR GL+ ++D R SFL IL+++ +PP+ + +ENV GF
Sbjct: 72 FQSWNADVFMMSPPCQPFTRVGLKGDTADPRTKSFLYILDILRRMAEPPNHILLENVKGF 131
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 192
ETS+T ++ L Y QEF+LSP QFG+P SR RYF LAKRKPL+F + +
Sbjct: 132 ETSETRGNLVTTLDECGYCYQEFLLSPNQFGIPNSRLRYFLLAKRKPLTFVFEHQTEIMK 191
Query: 193 RSP-SPLLG----NDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFL 247
P + L+G N D + +Q S +K C P F D + +T
Sbjct: 192 EMPVNSLIGQAPANQDASSSEVPNQ-STSQNKQEIPC-PYSIF-------DPEDRDTTNC 242
Query: 248 STGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYY 307
+ ++ EE + L+ L++R+ +DIV P S+R CCFTK+Y
Sbjct: 243 REISEFLEPHSKEEE----------ESLLLQDKLLDRYWKVLDIVTPSSRRSCCFTKAYG 292
Query: 308 RYVKGTGSLL-----------ATVQPKNKGKASSLKEQH---LRYFTPREVANLHSFPGD 353
YV+GTGS+L T K++ ++ L H +R+F+PREVA+LH P +
Sbjct: 293 HYVEGTGSVLFSQTDIDAKDIFTKVSKSEDQSERLDLLHQLKMRFFSPREVASLHCLPPE 352
Query: 354 FQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
F FP + +QRY +LGNSL+ VVA L + L
Sbjct: 353 FTFPQATTTKQRYRVLGNSLNAHVVAELFKLL 384
>gi|73948982|ref|XP_848593.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase isoform 2
[Canis lupus familiaris]
Length = 391
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 157/402 (39%), Positives = 218/402 (54%), Gaps = 39/402 (9%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSGIGGM +L ++ + AQVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 EPLRVLELYSGIGGMHQALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D + L+SPPCQP+TR GLQ +D R S L IL ++P K P + +ENV
Sbjct: 62 LEEFDKLSFNMILMSPPCQPFTRIGLQGDVTDPRTNSLLYILNILPRLQKLPKYVLLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQLL 187
GFE S T +I+ L N + QEF+LSP FG+P SR RYF +AK +PL F Q
Sbjct: 122 KGFEVSSTRDLLIQTLENCGFQYQEFLLSPTSFGIPNSRLRYFLIAKLQSEPLPF--QAP 179
Query: 188 NNQLLRSPSPLLGNDDMTVI-------TKHDQPDDSWDKLLESCDPVERF---LEFSNSG 237
L+ P N + I K +P+ +DK C E LE
Sbjct: 180 GQVLMEFPKTESENPEKNTIDAENKIERKKIEPNICFDK-GRQCSGKETILFKLETIQEL 238
Query: 238 DQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSK 297
D+ + + LS + DF E+ V++++ +FL P SL+ R+ +DIV P +
Sbjct: 239 DRKHHQDNDLS--VQMLKDF--LEDDVDMNQ-----YFLPPKSLL-RYALLLDIVKPTCR 288
Query: 298 RCCCFTKSYYRYVKGTGSLLATVQP-------------KNKGKASSLKEQHLRYFTPREV 344
R CFTK Y YV+GTGS+L T + + K + L LRYFTP+E+
Sbjct: 289 RSTCFTKGYGSYVEGTGSVLQTTEDVQIEDIYKSLTNLSQEEKITKLLMLKLRYFTPKEI 348
Query: 345 ANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
ANL FP +F FP ++++QRY LLGNSL++ VVA L++ L+
Sbjct: 349 ANLLGFPSEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILY 390
>gi|2895945|gb|AAC39764.1| putative DNA cytosine methyltransferase DNMT2 [Homo sapiens]
Length = 391
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 224/399 (56%), Gaps = 33/399 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 EPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D L+SPPCQP+TR G Q +D+R SFL IL+++P K P + +ENV
Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ-- 185
GFE S T +I+ + N + QEFILSP G+P SR RYF +AK +PL F+
Sbjct: 122 KGFEVSSTRDLLIQTIENCGFQYQEFILSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQ 181
Query: 186 -LLNNQLLRSPSPLLGNDDM--TVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQV 240
L+ + S P D+ + K+ +P+ S+D ++ D + LE + +
Sbjct: 182 VLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRK 241
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
N + LS + DF ++ ++ +L+P + R+ +DIV P +R
Sbjct: 242 NQQDSDLS--VKMLKDF--------LEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSV 291
Query: 301 CFTKSYYRYVKGTGSLLAT---VQPKNKGKA---SSLKEQ-------HLRYFTPREVANL 347
CFTK Y Y++GTGS+L T VQ +N K+ S +EQ LRYFTP+E+ANL
Sbjct: 292 CFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANL 351
Query: 348 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
FP +F FP ++++QRY LLGNSL++ VVA L++ L+
Sbjct: 352 LGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILY 390
>gi|410211590|gb|JAA03014.1| tRNA aspartic acid methyltransferase 1 [Pan troglodytes]
gi|410259146|gb|JAA17539.1| tRNA aspartic acid methyltransferase 1 [Pan troglodytes]
Length = 391
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 224/399 (56%), Gaps = 33/399 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 EPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D L+SPPCQP+TR G Q +D+R SFL IL+++P K P + +ENV
Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ-- 185
GFE S T +I+ + N + QEF+LSP G+P SR RYF +AK +PL F+
Sbjct: 122 KGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQ 181
Query: 186 -LLNNQLLRS--PSPLLGNDDMTVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQV 240
L+ + S P + + + K+ +P+ S+D ++ D + LE + +
Sbjct: 182 VLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRK 241
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
N E LS + DF ++ ++ +L+P + R+ +DIV P +R
Sbjct: 242 NQEDSDLS--VKMLKDF--------LEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSV 291
Query: 301 CFTKSYYRYVKGTGSLLAT---VQPKNKGKA---SSLKEQ-------HLRYFTPREVANL 347
CFTK Y Y++GTGS+L T VQ +N K+ S +EQ LRYFTP+E+ANL
Sbjct: 292 CFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANL 351
Query: 348 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
FP +F FP ++++QRY LLGNSL++ VVA L++ L+
Sbjct: 352 LGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILY 390
>gi|4758184|ref|NP_004403.1| tRNA (cytosine(38)-C(5))-methyltransferase [Homo sapiens]
gi|17374834|sp|O14717.1|TRDMT_HUMAN RecName: Full=tRNA (cytosine(38)-C(5))-methyltransferase; AltName:
Full=DNA (cytosine-5)-methyltransferase-like protein 2;
Short=Dnmt2; AltName: Full=DNA methyltransferase homolog
HsaIIP; Short=DNA MTase homolog HsaIIP; Short=M.HsaIIP;
AltName: Full=PuMet
gi|2627431|gb|AAC51939.1| putative DNA methyltransferase [Homo sapiens]
gi|2894544|emb|CAA11272.1| DNA methyltransferase [Homo sapiens]
gi|47496579|emb|CAG29312.1| DNMT2 [Homo sapiens]
gi|119606623|gb|EAW86217.1| hCG23994, isoform CRA_a [Homo sapiens]
gi|158256270|dbj|BAF84106.1| unnamed protein product [Homo sapiens]
gi|167887559|gb|ACA05983.1| tRNA aspartic acid methyltransferase 1 variant 3 [Homo sapiens]
gi|167887563|gb|ACA05987.1| tRNA aspartic acid methyltransferase 1 variant 4 [Homo sapiens]
Length = 391
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 224/399 (56%), Gaps = 33/399 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 EPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D L+SPPCQP+TR G Q +D+R SFL IL+++P K P + +ENV
Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ-- 185
GFE S T +I+ + N + QEF+LSP G+P SR RYF +AK +PL F+
Sbjct: 122 KGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQ 181
Query: 186 -LLNNQLLRSPSPLLGNDDM--TVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQV 240
L+ + S P D+ + K+ +P+ S+D ++ D + LE + +
Sbjct: 182 VLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRK 241
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
N + LS + DF ++ ++ +L+P + R+ +DIV P +R
Sbjct: 242 NQQDSDLS--VKMLKDF--------LEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSV 291
Query: 301 CFTKSYYRYVKGTGSLLAT---VQPKNKGKA---SSLKEQ-------HLRYFTPREVANL 347
CFTK Y Y++GTGS+L T VQ +N K+ S +EQ LRYFTP+E+ANL
Sbjct: 292 CFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANL 351
Query: 348 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
FP +F FP ++++QRY LLGNSL++ VVA L++ L+
Sbjct: 352 LGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILY 390
>gi|332217175|ref|XP_003257732.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Nomascus
leucogenys]
Length = 393
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 148/399 (37%), Positives = 225/399 (56%), Gaps = 33/399 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 EPVRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D L+SPPCQP+TR G Q +D+R SFL IL+++P K P + +ENV
Sbjct: 62 LEEFDRLSCDMILMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ-- 185
GFE S T +I+ + N + QEF+LSP G+P SR RYF +AK +PL F+
Sbjct: 122 KGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQ 181
Query: 186 -LLNNQLLRS--PSPLLGNDDMTVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQV 240
L+ + S P + + + K+ +P+ S+D ++ D + LE + +
Sbjct: 182 VLMEFPKIESVHPQKYAMDVENKIQEKNIEPNISFDSSMQCSGKDAILFKLETAEEIHRK 241
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
N + LS + DF ++ ++ +L+P + R+ +DIV P +R
Sbjct: 242 NQQDSDLS--VKMLKDF--------LEDDTDMNQYLLPPKSLLRYALLLDIVQPTCRRSV 291
Query: 301 CFTKSYYRYVKGTGSLLAT---VQPKNKGKA-SSLKEQH---------LRYFTPREVANL 347
CFTK Y Y++GTGS+L T VQ +N K+ ++L ++ LRYFTP+E+ANL
Sbjct: 292 CFTKGYGSYIEGTGSVLQTAEDVQVENVYKSLTNLSQEQQITKLLMLKLRYFTPKEIANL 351
Query: 348 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
FP +F FP ++++QRY LLGNSL++ VVA L++ L+
Sbjct: 352 LGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILY 390
>gi|332833684|ref|XP_001151840.2| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase isoform 4
[Pan troglodytes]
gi|397522331|ref|XP_003831225.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Pan
paniscus]
gi|29126973|gb|AAH47733.1| TRNA aspartic acid methyltransferase 1 [Homo sapiens]
gi|410293242|gb|JAA25221.1| tRNA aspartic acid methyltransferase 1 [Pan troglodytes]
gi|410348740|gb|JAA40974.1| tRNA aspartic acid methyltransferase 1 [Pan troglodytes]
Length = 391
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 224/399 (56%), Gaps = 33/399 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 EPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D L+SPPCQP+TR G Q +D+R SFL IL+++P K P + +ENV
Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ-- 185
GFE S T +I+ + N + QEF+LSP G+P SR RYF +AK +PL F+
Sbjct: 122 KGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQ 181
Query: 186 -LLNNQLLRSPSPLLGNDDM--TVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQV 240
L+ + S P D+ + K+ +P+ S+D ++ D + LE + +
Sbjct: 182 VLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRK 241
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
N + LS + DF ++ ++ +L+P + R+ +DIV P +R
Sbjct: 242 NQQDSDLS--VKMLKDF--------LEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSV 291
Query: 301 CFTKSYYRYVKGTGSLLAT---VQPKNKGKA---SSLKEQ-------HLRYFTPREVANL 347
CFTK Y Y++GTGS+L T VQ +N K+ S +EQ LRYFTP+E+ANL
Sbjct: 292 CFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANL 351
Query: 348 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
FP +F FP ++++QRY LLGNSL++ VVA L++ L+
Sbjct: 352 LGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILY 390
>gi|440909178|gb|ELR59115.1| tRNA (cytosine-5-)-methyltransferase [Bos grunniens mutus]
Length = 391
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 154/409 (37%), Positives = 215/409 (52%), Gaps = 55/409 (13%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E R LE YSGIGGM +L ++ + AQVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 EPLRALELYSGIGGMHQALRESCIPAQVVAAVDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D + L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV
Sbjct: 62 LEEFDRLSFNMILMSPPCQPFTRIGLQGDVTDPRTNSFLYILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 189
GFE S T +I+ + N + QEF+LSP G+P SR RYF +AK +P F Q
Sbjct: 122 KGFEMSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQPEPFPFQAPGQ 181
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249
L+ P T+ + P E+ E +G ++ ++ +
Sbjct: 182 VLMEFPK-----------TESEHPPKYAIN-------AEKKTEEKKTGPKICFDSSTQCS 223
Query: 250 GTAAVDDFGAAEETVEVDRCVSIDH--------------------FLVPLSLIERWGSAM 289
G A+ E E+DR D FL P SL+ R+ +
Sbjct: 224 GKEAI--LFKLETAGEIDRKHQQDSDLSVQMLKDFLEDDIDKHSFFLPPKSLL-RYALLL 280
Query: 290 DIVYPDSKRCCCFTKSYYRYVKGTGSLLAT---VQPKNKGKA-SSLKEQ---------HL 336
DIV P SKR CFTK Y RY++GTGS+L T VQ +N K+ +SL ++ L
Sbjct: 281 DIVKPTSKRSMCFTKGYGRYIEGTGSVLQTTEDVQIENIYKSLTSLSQEEKIMRLSMLQL 340
Query: 337 RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
R+FTP+E+ANL FP +F FP +++QRY LLGNSL++ VVA L++ L
Sbjct: 341 RFFTPKEIANLLGFPPEFGFPEMTTVKQRYRLLGNSLNVHVVAKLIKIL 389
>gi|145348185|ref|XP_001418536.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578765|gb|ABO96829.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 371
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 153/387 (39%), Positives = 205/387 (52%), Gaps = 51/387 (13%)
Query: 10 GEAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL 68
G RVLE Y G+G M +L +A A+V A+D+N A D Y +N+G RP Q ++ ++
Sbjct: 26 GGKLRVLEMYCGVGVMHAALRRARGDEAEVCGAYDVNPNACDAYAMNYGTRPSQKSLVSV 85
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKIL-ELIPHTVKP-PHMLFV 126
L A AW +SPPCQP+TR GL+ D RA SF++++ E++ P +FV
Sbjct: 86 AMETLVKTKAEAWAMSPPCQPFTRAGLKLDVDDGRAESFMRLVDEMVKMDASARPKYVFV 145
Query: 127 ENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
ENVVGFETS + + L+ S + QEFIL+P FGVPYSRPRYF LA R +F +
Sbjct: 146 ENVVGFETSRMRDALRDALSASAFHAQEFILTPTMFGVPYSRPRYFMLA-RSTRAFEDGV 204
Query: 187 LNNQLLRSPSPLLGNDDMTVITKHDQPD-DSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
+++ RSP P + I PD D P+ RFL+
Sbjct: 205 --DEIRRSPPPSKLSHRREWI-----PDFDDVRDADVVVAPLSRFLD------------- 244
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
A DD A + D ++R ++DIV + C CFTKS
Sbjct: 245 ------RATDDIWRANAVKQDD--------------VDRAKGSIDIVTAEDTTCNCFTKS 284
Query: 306 YYRYVKGTGSLLATVQPKNKGK-----ASSLKEQHLRYFTPREVANLHSFPGDFQFPHHL 360
YY+YVKGTGS++A Q +K + LRYFT EVA LHS P DF +P +L
Sbjct: 285 YYKYVKGTGSVVAN-QSVDKATWDGRMGDGASDVRLRYFTVDEVARLHSLPNDFAWPSNL 343
Query: 361 SLRQRYALLGNSLSIAVVAPLLQYLFA 387
+ RQ+Y LLGNS+S+A VAPLL YLFA
Sbjct: 344 TTRQKYTLLGNSMSVACVAPLLDYLFA 370
>gi|296206220|ref|XP_002750112.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase isoform 1
[Callithrix jacchus]
Length = 391
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 220/399 (55%), Gaps = 33/399 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY NF H + I+ +T
Sbjct: 2 EPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYRFNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D L+SPPCQP+TR G Q +D+R SFL IL+++P + P + +ENV
Sbjct: 62 LQEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQRLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ-- 185
GFE S T +++ + N + QEF+LSP G+P SR RYF +AK +PL F+
Sbjct: 122 KGFEVSSTRDLLLQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQ 181
Query: 186 -LLNNQLLRSPSPLLGNDDM--TVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQV 240
L+ + S P D+ + K+ P+ S+D + D + LE + +
Sbjct: 182 VLMEFPKIESAHPQKYAMDVENKIQGKNTDPNISFDSSIHCSGKDAILFKLETAEEIHRK 241
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
N + LS + DF ++ V ++ +L+P + R+ +DIV P +R
Sbjct: 242 NQQDSDLS--VQMLKDF--------LEDDVDMNQYLLPPKSLLRYALLLDIVQPTCRRSM 291
Query: 301 CFTKSYYRYVKGTGSLLAT---VQPKN----------KGKASSLKEQHLRYFTPREVANL 347
CFTK Y Y++GTGS+L T VQ +N + K + L LRYFTP+EVANL
Sbjct: 292 CFTKGYGSYIEGTGSVLQTAEDVQIENIYKSLTNLSQEEKITKLLMLKLRYFTPKEVANL 351
Query: 348 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
FP +F FP ++++QRY LLGNSL++ VVA L++ L+
Sbjct: 352 LGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILY 390
>gi|330802352|ref|XP_003289182.1| hypothetical protein DICPUDRAFT_153508 [Dictyostelium purpureum]
gi|325080758|gb|EGC34300.1| hypothetical protein DICPUDRAFT_153508 [Dictyostelium purpureum]
Length = 378
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 142/386 (36%), Positives = 211/386 (54%), Gaps = 25/386 (6%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQN 67
ND E RVLEFYSGIGGM Y L ++ V +VV++FDIN A Y+ F Q NI++
Sbjct: 13 NDEEELRVLEFYSGIGGMHYGLKESGVKFEVVQSFDINTNAILNYKYTFNENTSQKNIES 72
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
LT E+D + ++AWL+SPPCQP+TR GLQK D R SF +L++I PP + +E
Sbjct: 73 LTVEEIDNFKSNAWLMSPPCQPFTRSGLQKDDLDNRTNSFFHLLDVIGKLKSPPKYILIE 132
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 187
NV GFE S+T +++++L Y QEF L+P QF +P R RYFC+AK + F Q +
Sbjct: 133 NVFGFEKSNTRTELVKVLKQLHYSFQEFHLTPQQFDLPNQRLRYFCIAKLNSI-FNFQEI 191
Query: 188 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFL 247
+ T+I K D+ ++ + + + ++ +N G+
Sbjct: 192 ---------------EETIIDKKDENVNNINNENNENNNNNDNNDNNDKYKILNYIPGYN 236
Query: 248 STGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYY 307
+ + +T + D + H VP L+ G DI +SK C CFTKSY
Sbjct: 237 HSTLEDCEPLSNYLDTDKTDDEIYQQH-KVPEKLLLSKGMLFDIKQKESKTCNCFTKSYG 295
Query: 308 RYVKGTGSLLATVQPKNKGKA-----SSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSL 362
++V+GTGS+ +Q N+ KA SL LRYFTP+E+ LH FP +F+F L
Sbjct: 296 KFVEGTGSI---IQIDNEFKADETNPKSLIPMKLRYFTPKEITRLHGFPEEFKFSPQLKT 352
Query: 363 RQRYALLGNSLSIAVVAPLLQYLFAQ 388
Q Y L+GNSL++ +++ L++ L ++
Sbjct: 353 IQCYRLIGNSLNVKIISELVKLLVSK 378
>gi|402913885|ref|XP_003919381.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Papio
anubis]
Length = 391
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 220/398 (55%), Gaps = 33/398 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 EPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D L+SPPCQP+TR G Q +D+R SFL IL+++P K P + +ENV
Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ-- 185
GFE S T I+ + N + QEF+LSP G+P SR RYF +AK +PL F+
Sbjct: 122 KGFEVSSTRDLFIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQ 181
Query: 186 -LLNNQLLRSPSPLLGNDDM--TVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQV 240
L+ + S P D+ + K+ +P+ S+D + D + LE + +
Sbjct: 182 VLMQFPKIESVHPQKDTMDVENKIQEKNIEPNISFDSSTQCSGKDAILFKLETAEEIHRK 241
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
N + LS + DF ++ ++ +L+P + R+ +DIV P +R
Sbjct: 242 NQQDSDLS--VKMLKDF--------LEDDTDMNQYLLPPKSLLRYALLLDIVQPTCRRSV 291
Query: 301 CFTKSYYRYVKGTGSLLAT---VQPKNKGKASSLKEQH----------LRYFTPREVANL 347
CFTK Y Y++GTGS+L T VQ +N K+ + Q LRYFTP+E+ANL
Sbjct: 292 CFTKGYGSYIEGTGSVLQTAEDVQIENIYKSLTKLSQEEQITKLLMLKLRYFTPKEIANL 351
Query: 348 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
FP +F FP +++++QRY LLGNSL++ VVA L++ L
Sbjct: 352 LGFPPEFGFPENITVKQRYRLLGNSLNVHVVAKLIKIL 389
>gi|32441269|ref|NP_861528.1| tRNA (cytosine-5-)-methyltransferase [Bos taurus]
gi|75046080|sp|Q7YS61.1|TRDMT_BOVIN RecName: Full=tRNA (cytosine-5-)-methyltransferase; AltName:
Full=DNA (cytosine-5)-methyltransferase-like protein 2;
Short=Dnmt2
gi|31074159|gb|AAP20550.1| DNA cytosine-5 methyltransferase 2 [Bos taurus]
gi|296481442|tpg|DAA23557.1| TPA: tRNA (cytosine-5-)-methyltransferase [Bos taurus]
Length = 391
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 153/409 (37%), Positives = 215/409 (52%), Gaps = 55/409 (13%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E R LE YSGIGGM +L ++ + AQVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 EPLRALELYSGIGGMHQALRESCIPAQVVAAVDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D + L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV
Sbjct: 62 LEEFDRLSFNMILMSPPCQPFTRIGLQGDVTDPRTNSFLHILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 189
GFE S T +I+ + N + QEF+LSP G+P SR RYF +AK +P F Q
Sbjct: 122 KGFEMSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQPEPFPFQAPGQ 181
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249
L+ P T+ + P E+ E +G ++ ++ +
Sbjct: 182 VLMEFPK-----------TESEHPPKYAIN-------AEKKTEEKKTGPKICFDSSTQCS 223
Query: 250 GTAAVDDFGAAEETVEVDRCVSIDH--------------------FLVPLSLIERWGSAM 289
G A+ E E+DR D FL P SL+ R+ +
Sbjct: 224 GKEAI--LFKLETAGEIDRKHQQDSDLSVRMLKDFLEDDIDKHSFFLPPKSLL-RYALLL 280
Query: 290 DIVYPDSKRCCCFTKSYYRYVKGTGSLLAT---VQPKNKGKA-SSLKEQ---------HL 336
DIV P S+R CFTK Y RY++GTGS+L T VQ +N K+ +SL ++ L
Sbjct: 281 DIVKPTSRRSMCFTKGYGRYIEGTGSVLQTTEDVQIENIYKSLTSLSQEEKIMRLSMLQL 340
Query: 337 RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
R+FTP+E+ANL FP +F FP +++QRY LLGNSL++ VVA L++ L
Sbjct: 341 RFFTPKEIANLLGFPPEFGFPEMTTVKQRYRLLGNSLNVHVVAKLIKIL 389
>gi|410963252|ref|XP_003988179.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Felis catus]
Length = 391
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 157/404 (38%), Positives = 222/404 (54%), Gaps = 43/404 (10%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSGIGGM +L ++ + AQVV A D+N AN+VY NF H + I+ +T
Sbjct: 2 EPLRVLELYSGIGGMHQALRESCIPAQVVAAIDVNTVANEVYAYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D + L+SPPCQP+TR GLQ +D R S L IL+++P K P + +ENV
Sbjct: 62 LEEFDKLSFNMILMSPPCQPFTRIGLQGDVTDPRTNSLLHILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC--Q 185
GFE S T +I+ + N + QEF+LSP G+P SR RYF +AK +PL F+ Q
Sbjct: 122 KGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQ 181
Query: 186 LLNN-QLLRSPSPLLGNDDMTVIT------KHDQPDDSWDKLLESCDPVERF---LEFSN 235
+L L S P + T++ K +P+ +D C E LE
Sbjct: 182 VLKEFPKLESEHP----EKNTIVAENKIERKKIEPNICFDN-GRQCSGKEAILFKLETIE 236
Query: 236 SGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPD 295
D+ + + LS + DF E+ ++ ++ +FL P SL+ R+ +DIV P
Sbjct: 237 EIDRKHQQDSDLS--VQMLKDF--LEDDIDTNQ-----YFLPPKSLL-RYALLLDIVKPT 286
Query: 296 SKRCCCFTKSYYRYVKGTGSLLAT---VQPKN----------KGKASSLKEQHLRYFTPR 342
+R CFTK Y Y++GTGS+L T VQ +N + K + L LRYFTP+
Sbjct: 287 CRRSTCFTKGYGSYIEGTGSVLQTSEDVQIENVYKSLTNLSQEEKITKLSMLKLRYFTPK 346
Query: 343 EVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
E+ANL FP DF FP ++++QRY LLGNSL++ VVA L++ L+
Sbjct: 347 EIANLLGFPPDFGFPEKITVKQRYRLLGNSLNVHVVAELIKILY 390
>gi|426240827|ref|XP_004014295.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Ovis aries]
Length = 386
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 206/391 (52%), Gaps = 24/391 (6%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E R LE YSGIGGM +L ++ + AQVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 EPLRALELYSGIGGMHQALRESCIPAQVVAAVDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D + L+SPPCQP+TR GLQ +D R SFL IL+++P K P + VENV
Sbjct: 62 LEEFDRLSFNMILMSPPCQPFTRIGLQGDVTDPRTNSFLYILDILPRLQKLPKYILVENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 189
GFE S +I+ + N + QEF+LSP G+P SR RYF +AK +P F Q
Sbjct: 122 KGFEVSSARDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQPEPFPFQAPGQ 181
Query: 190 QLLRSPSPLLGNDDMTVIT--KHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFL 247
L+ P + I K +P+ +D + + +G+
Sbjct: 182 VLMEFPKTESEHSPQYAINAEKKTEPNICFDSSTQCSGKEAILFKLETAGEIDRKRQQDS 241
Query: 248 STGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYY 307
+ DF E+ ++ FL P SL+ R+ +DIV P S+R CFTK Y
Sbjct: 242 DLSVRILKDF--LEDNIDKH-----SFFLPPKSLL-RYALLLDIVKPTSRRSMCFTKGYG 293
Query: 308 RYVKGTGSLLAT---VQPKN----------KGKASSLKEQHLRYFTPREVANLHSFPGDF 354
RY++GTGS+L VQ +N + K L LR+FTP+E+ANL FP +F
Sbjct: 294 RYIEGTGSVLQMTEDVQIENIYKSLTSLSPEEKIMRLSMLQLRFFTPKEIANLLGFPPEF 353
Query: 355 QFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
FP +++QRY LLGNSL++ VVA L++ L
Sbjct: 354 GFPEMTTVKQRYRLLGNSLNVHVVAKLIKIL 384
>gi|355782667|gb|EHH64588.1| tRNA (cytosine-5-)-methyltransferase [Macaca fascicularis]
Length = 391
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 219/398 (55%), Gaps = 33/398 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 EPLRVLELYSGVGGMHHALRESCIPAQVVAAVDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D L+SPPCQP+TR G Q +D+R SFL IL ++P K P + +ENV
Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLYILNILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ-- 185
GFE S T +I+ + N + QEF+LSP G+P SR RYF +AK +PL F+
Sbjct: 122 KGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQ 181
Query: 186 -LLNNQLLRSPSPLLGNDDM--TVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQV 240
L+ + S P D+ + K+ +P+ S+D + D + LE + +
Sbjct: 182 VLMQFPKIESVHPQKYTVDVENKIQEKNIEPNISFDSSTQGSGKDAILFKLETAEEIHRK 241
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
N + LS + DF ++ ++ +L+P + R+ +DIV P +R
Sbjct: 242 NQQDSDLS--VKMLKDF--------LEDDTDMNQYLLPPKSLLRYALLLDIVQPTCRRSV 291
Query: 301 CFTKSYYRYVKGTGSLLAT---VQPKNKGKASSLKEQH----------LRYFTPREVANL 347
CFTK Y Y++GTGS+L T VQ +N K+ + Q LRYFTP+E+ANL
Sbjct: 292 CFTKGYGSYIEGTGSVLQTAEDVQIENIYKSLTKLSQEEQITKLLMLKLRYFTPKEIANL 351
Query: 348 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
FP +F FP ++++QRY LLGNSL++ VVA L++ L
Sbjct: 352 LGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKIL 389
>gi|355562318|gb|EHH18912.1| tRNA (cytosine-5-)-methyltransferase [Macaca mulatta]
Length = 391
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 219/398 (55%), Gaps = 33/398 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 EPLRVLELYSGVGGMHHALRESCIPAQVVAAVDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D L+SPPCQP+TR G Q +D+R SFL IL ++P K P + +ENV
Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLYILNILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ-- 185
GFE S T +I+ + N + QEF+LSP G+P SR RYF +AK +PL F+
Sbjct: 122 KGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQ 181
Query: 186 -LLNNQLLRSPSPLLGNDDM--TVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQV 240
L+ + S P D+ + K+ +P+ S+D + D + LE + +
Sbjct: 182 VLMQFPKIESVYPQKYTMDVENKIQEKNIEPNISFDSSTQRSGKDAILFKLETAEEIHRK 241
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
N + LS + DF ++ ++ +L+P + R+ +DIV P +R
Sbjct: 242 NQQDSDLS--VKMLKDF--------LEDDTDMNQYLLPPKSLLRYALLLDIVQPTCRRSV 291
Query: 301 CFTKSYYRYVKGTGSLLAT---VQPKNKGKASSLKEQH----------LRYFTPREVANL 347
CFTK Y Y++GTGS+L T VQ +N K+ + Q LRYFTP+E+ANL
Sbjct: 292 CFTKGYGSYIEGTGSVLQTAEDVQIENIYKSLTKLSQEEQITKLLMLKLRYFTPKEIANL 351
Query: 348 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
FP +F FP ++++QRY LLGNSL++ VVA L++ L
Sbjct: 352 LGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKIL 389
>gi|403278153|ref|XP_003930688.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Saimiri
boliviensis boliviensis]
Length = 391
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 220/397 (55%), Gaps = 33/397 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAA 71
RVLE YSG+GGM ++L ++ V AQVV A D+N AN+VY NF H + I+ +T
Sbjct: 4 LRVLELYSGVGGMHHALRESCVPAQVVAAVDVNTVANEVYRYNFPHTQLLAKTIEGITLQ 63
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
E D L+SPPCQP+TR G Q +D+R SFL IL+++P + P + +ENV G
Sbjct: 64 EFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQRLPKYILLENVKG 123
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ---L 186
FE S T ++ + N + QEF+LSP G+P SR RYF +AK +PL F+ L
Sbjct: 124 FEVSSTRDLLLRTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVL 183
Query: 187 LNNQLLRSPSPLLGNDDM--TVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNT 242
+ + S P D+ + K+ +P+ S+D ++ D + LE + + N
Sbjct: 184 MEFPKIESAHPQKYALDVEYKIQGKNTEPNVSFDSSIQCSGKDAILFKLETAEEIHRKNQ 243
Query: 243 ETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCF 302
+ LS + DF ++ + ++ +L+P + R+ +DIV P +R CF
Sbjct: 244 QDSDLS--VQMLKDF--------LEDDIDMNQYLLPPKSLLRYALLLDIVQPTCRRSMCF 293
Query: 303 TKSYYRYVKGTGSLLAT---VQPKN----------KGKASSLKEQHLRYFTPREVANLHS 349
TK Y YV+GTGS+L T VQ +N + K + L LRYFTP+E+ANL
Sbjct: 294 TKGYGSYVEGTGSVLQTAEDVQIENIYKSLTNLSQEEKITKLLMLKLRYFTPKEIANLLG 353
Query: 350 FPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
FP +F FP ++++QRY LLGNSL++ VVA L++ L+
Sbjct: 354 FPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILY 390
>gi|380790109|gb|AFE66930.1| tRNA (cytosine(38)-C(5))-methyltransferase [Macaca mulatta]
Length = 391
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 219/398 (55%), Gaps = 33/398 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 EPLRVLELYSGVGGMHHALRESCIPAQVVAAVDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D L+SPPCQP+TR G Q +D+R SFL IL ++P K P + +ENV
Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLYILNILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ-- 185
GFE S T +I+ + N + QEF+LSP G+P SR RYF +AK +PL F+
Sbjct: 122 KGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQ 181
Query: 186 -LLNNQLLRSPSPLLGNDDM--TVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQV 240
L+ + S P D+ + K+ +P+ S+D + D + LE + +
Sbjct: 182 VLMQFPKIESVYPQKYTMDVENKIQEKNIEPNISFDSSTQHSGKDAILFKLETAEEIHRK 241
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
N + LS + DF ++ ++ +L+P + R+ +DIV P +R
Sbjct: 242 NQQDSDLS--VKMLKDF--------LEDDTDMNQYLLPPKSLLRYALLLDIVQPTCRRSV 291
Query: 301 CFTKSYYRYVKGTGSLLAT---VQPKNKGKASSLKEQH----------LRYFTPREVANL 347
CFTK Y Y++GTGS+L T VQ +N K+ + Q LRYFTP+E+ANL
Sbjct: 292 CFTKGYGSYIEGTGSVLQTAEDVQIENIYKSLTKLSQEEQITKLLMLKLRYFTPKEIANL 351
Query: 348 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
FP +F FP ++++QRY LLGNSL++ VVA L++ L
Sbjct: 352 LGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKIL 389
>gi|431917686|gb|ELK16951.1| tRNA (cytosine-5-)-methyltransferase [Pteropus alecto]
Length = 391
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 218/398 (54%), Gaps = 33/398 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSGIGGM +L ++ + AQVV A D+N+ AN+VY NF H + I+ +T
Sbjct: 2 EPLRVLELYSGIGGMHQALRESCIPAQVVAAVDVNNIANEVYNYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E + L+SPPCQP+TR GLQ +D R SF+ IL+++P K P + +ENV
Sbjct: 62 LEEFERLSFDMILMSPPCQPFTRIGLQGDVTDPRTNSFIYILDILPRLQKLPKFILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQLL 187
GFE S T +I+ + + + QEF+LSP G+P SR RYF +AK +PL F Q
Sbjct: 122 KGFEISSTRDLLIQTIESCGFQYQEFLLSPTSLGIPNSRLRYFLVAKLQSEPLPF--QAP 179
Query: 188 NNQLLRSPS-------PLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQV 240
L+ P + + T+ K +P+ S+D + + +G+
Sbjct: 180 GQVLMEFPKIECEHTQKRAVDAENTIEGKKIEPNVSFDSSKQCSGKEAILFKLETAGEIE 239
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
+ DF +E D +S +FL P L+ R+ +DIV P +R
Sbjct: 240 RKHQQDSDLSVQMLKDF------LEDDADMS-QYFLPPKPLL-RYALLLDIVKPTCRRSM 291
Query: 301 CFTKSYYRYVKGTGSLLAT---VQPKNKGKA-SSLKEQH---------LRYFTPREVANL 347
CFTK Y RY++GTGS+L T VQ +N K+ +SL ++ LRYFTP+E+ANL
Sbjct: 292 CFTKGYGRYIEGTGSVLQTAEDVQIENIYKSLTSLSQEEKIKKLLMLKLRYFTPKEIANL 351
Query: 348 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
H FP +F FP ++++QRY LLGNSL++ +VA L++ L
Sbjct: 352 HGFPPEFGFPETVTMKQRYRLLGNSLNVHIVAKLIKIL 389
>gi|395827473|ref|XP_003786926.1| PREDICTED: LOW QUALITY PROTEIN: tRNA
(cytosine(38)-C(5))-methyltransferase [Otolemur
garnettii]
Length = 399
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 218/403 (54%), Gaps = 39/403 (9%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLT 69
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF I+ +T
Sbjct: 2 EPLRVLELYSGVGGMHHALRESGIPAQVVAAIDVNTVANEVYKYNFPQTHLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D L+SPPCQP+TR GLQ +D R SFL L+++P K P + +ENV
Sbjct: 62 LEEFDRLSCDMILMSPPCQPFTRIGLQGDMTDPRTNSFLYFLDILPRLRKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQLL 187
GFE S T +I+ + N + QEF+LSP G+P SR RYF +AK +PL F+
Sbjct: 122 KGFEVSSTRDLLIQTMENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQNP-- 179
Query: 188 NNQLLRS--------PSPLLGNDDMTVITKHDQPDDSWDKLLESC--DPVERFLEFSNSG 237
Q+L P + + + K +P D + D V LE +
Sbjct: 180 -GQVLMEFPKIECEYPQKCSIDAENKIEEKKIEPSICCDSSTQCSGRDAVLYKLETAEEI 238
Query: 238 DQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSK 297
++ + + LS G EE +++++ +FL P SL+ R+ +DIV P +
Sbjct: 239 ERKHQQDNDLSVQMLK----GFLEEDIDMNQ-----YFLPPQSLL-RYALLLDIVRPTCR 288
Query: 298 RCCCFTKSYYRYVKGTGSLLAT---VQPKN----------KGKASSLKEQHLRYFTPREV 344
R CFTK Y Y++GTGS+L T VQ +N + K + L LRYFTP+E+
Sbjct: 289 RSTCFTKGYGSYIEGTGSVLQTAEDVQIENIYKSLPDLSQEEKITKLLMLKLRYFTPKEI 348
Query: 345 ANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
AN+ FP +F FP ++++QRY LLGNSL++ VVA L++ L+A
Sbjct: 349 ANILGFPPEFGFPEEITVKQRYRLLGNSLNVHVVAKLIKILYA 391
>gi|326921696|ref|XP_003207092.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Meleagris
gallopavo]
Length = 398
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 160/408 (39%), Positives = 215/408 (52%), Gaps = 44/408 (10%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLTA 70
A RVLE YSGIGGM +L ++ V A+VV A D+N AN+VY+ NF P + I+ +T
Sbjct: 3 ALRVLELYSGIGGMHQALKESCVCAEVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGITL 62
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
E D L+SPPCQP+TR GLQ SD R SFL IL+++P K P L +ENV
Sbjct: 63 KEFDRLSFDMILMSPPCQPFTRIGLQGDVSDPRTKSFLYILDILPRLQKLPKYLLLENVK 122
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 190
GFE+S +++ L + QEF+LSP G+P SR RYF +AK F +
Sbjct: 123 GFESSSARNELLRTLETCGFEYQEFLLSPTCLGIPNSRLRYFLIAKLHQEPFFFHVPGQI 182
Query: 191 LLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 250
L R P + ++ ++K D+ D+ S E+ L SN G +++ G L
Sbjct: 183 LTRFP-----DQNLEELSK----DEVVDEASSSLPSGEKSL-VSNIGSDCSSKNGPLPK- 231
Query: 251 TAAVDDFGAAEETVEV---DRCVSI---------------DHFLVPLSLIERWGSAMDIV 292
A + AEE V D SI +FL P SL+ R+ +DIV
Sbjct: 232 EAFLFKLETAEEMVRKHSQDNDPSIQMLQDFLEDENEEMSQYFLAPKSLV-RYAFLLDIV 290
Query: 293 YPDSKRCCCFTKSYYRYVKGTGSLLAT---VQPKN----------KGKASSLKEQHLRYF 339
P +R CFTK Y YV+GTGS+L T VQ ++ + K L LRYF
Sbjct: 291 KPTCRRSTCFTKGYGHYVEGTGSVLQTAVDVQLESVFKHIENLTEEEKLMKLSTLKLRYF 350
Query: 340 TPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
TPRE+ANLH FP +F FP +S++Q Y LLGNSL++ VVA L+ L
Sbjct: 351 TPREIANLHGFPPEFGFPDKVSIKQCYRLLGNSLNVHVVAKLISILLG 398
>gi|307169339|gb|EFN62060.1| tRNA (cytosine-5-)-methyltransferase [Camponotus floridanus]
Length = 362
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 150/394 (38%), Positives = 213/394 (54%), Gaps = 57/394 (14%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAA 71
+VLE YSGIGGM Y+L +++++A+VV A DIN AN VY NF NI++L A
Sbjct: 1 MKVLELYSGIGGMHYALRESEITAKVVAAIDINPVANAVYRENFPETILMNRNIESLNAQ 60
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
EL+ G A L+SPPCQP+TR GL+K + D RA S L IL LIP +K + +ENV G
Sbjct: 61 ELNKLGLDAILMSPPCQPFTRLGLKKDALDNRACSLLHILNLIPE-LKSLRYILLENVKG 119
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF--RCQLLNN 189
FE S+ K + + + Y+ +E ILSP QFG+P SR RY+ LAKRK L F + LL N
Sbjct: 120 FEVSEMRDKFLNCIESCGYVYRELILSPCQFGIPNSRNRYYLLAKRKNLKFCFKQPLLKN 179
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249
L PS LL P S +L + ++NT++G +
Sbjct: 180 SL---PSALL-----------KLPPKSMHAIL------------AEKNGKINTKSGGM-- 211
Query: 250 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 309
+D+ E VE + +L+P L+++ +DI S CCFTK Y Y
Sbjct: 212 -CYTLDNI---LENVEESK------YLLPSKLLQKRAQVLDIRTSKSNGSCCFTKGYGHY 261
Query: 310 VKGTGSLLA-----TVQPKNKGKASS----------LKEQHLRYFTPREVANLHSFPGDF 354
V+GTGS+ T++ K A+ L + LR+F+P+EV L FP DF
Sbjct: 262 VEGTGSVYCPFADETIKLKYSKAANEENNLDQQIQLLSDLKLRFFSPKEVCRLMCFPEDF 321
Query: 355 QFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
FP H++ +Q+Y LLGNS+++ VV+ L+ L+ +
Sbjct: 322 NFPKHITDKQKYRLLGNSINVHVVSRLIFLLYTE 355
>gi|67514595|ref|NP_001020002.1| tRNA (cytosine-5-)-methyltransferase [Gallus gallus]
gi|66766328|dbj|BAD99025.1| DNA methyltransferase 2 [Gallus gallus]
Length = 398
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 156/411 (37%), Positives = 213/411 (51%), Gaps = 50/411 (12%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLTA 70
A RVLE YSGIGGM +L ++ + A+VV A D+N AN+VY+ NF P + I+ +T
Sbjct: 3 ALRVLELYSGIGGMHQALKESCICAEVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGITL 62
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
E D L+SPPCQP+TR GLQ SD R SFL IL+++P K P L +ENV
Sbjct: 63 KEFDRLSFDMILMSPPCQPFTRIGLQGDVSDPRTKSFLYILDILPRLQKCPKYLLLENVK 122
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 190
GFE+S +++ L + QEF+LSP G+P SR RYF +AK F +
Sbjct: 123 GFESSSARNELLRTLETCGFKYQEFLLSPTCLGIPNSRLRYFLIAKLHQEPFFFHVPGQI 182
Query: 191 LLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 250
L R P + ++ ++K D DK E+ L+ SN+ +++ G L G
Sbjct: 183 LTRLP-----DQNLEELSK----DKVVDKTGSXFPSGEKSLD-SNTSPDCSSKKGPLPKG 232
Query: 251 TAAVDDFGAAEETVEVDR------------------CVSIDHFLVPLSLIERWGSAMDIV 292
A + AE+ V R +FL P SL+ R+ +DIV
Sbjct: 233 -AFLFKLETAEQMVRKHRQDNDPSIQMLEDFLEEENEEMSQYFLAPKSLV-RYAFLLDIV 290
Query: 293 YPDSKRCCCFTKSYYRYVKGTGSLLAT----------------VQPKNKGKASSLKEQHL 336
P +R CFTK Y YV+GTGS+L T + + K S+LK L
Sbjct: 291 KPTCRRSTCFTKGYGHYVEGTGSVLQTAVDVELESVFKHIENLTEEEKLMKLSTLK---L 347
Query: 337 RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
RYFTPRE+ANLH FP +F FP +S++Q Y LLGNSL++ VVA L+ L
Sbjct: 348 RYFTPREIANLHGFPPEFGFPDKVSIKQCYRLLGNSLNVRVVAKLISILLG 398
>gi|224044835|ref|XP_002192893.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Taeniopygia
guttata]
Length = 399
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 159/415 (38%), Positives = 218/415 (52%), Gaps = 59/415 (14%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLTA 70
A RVLE YSGIGGM +L ++ A+VV A D+N AN VY+ NF P + I+ +T
Sbjct: 3 ALRVLELYSGIGGMHQALRESCRHAEVVAAVDVNTLANAVYKHNFPSTPLWAKTIEGITL 62
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
E D LLSPPCQP+TR GLQ SD R+ SFL IL+++P K P L +ENV
Sbjct: 63 KEFDRLSFDMILLSPPCQPFTRTGLQGDVSDPRSKSFLYILDILPRLQKLPKYLLLENVK 122
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC--QL 186
GFE+S ++++ LA + QEF+LSP G+P SR RYF +AK ++P SF+ Q+
Sbjct: 123 GFESSSARNELLQTLATCGFKYQEFLLSPTCLGIPNSRLRYFLIAKLQQEPFSFQAPGQI 182
Query: 187 LNNQLLRSPSPLL--------GNDDMTVITKHDQ------PDDSWDKL--------LESC 224
L + P +L G ++ T+ PD S L LE+
Sbjct: 183 LTRFPDQDPEGVLKEKVADKVGETSSSLSTEEKNLDPNIGPDSSSKSLPKGPFLFKLETV 242
Query: 225 DPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIER 284
+ +ER +Q N + + DF EE E+ + +FL P SL+ R
Sbjct: 243 EEMER------KHNQDN------DSSIQMLKDF-LEEENEEMSQ-----YFLPPKSLL-R 283
Query: 285 WGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATV-------------QPKNKGKASSL 331
+ +DIV P +R CFTK Y YV+GTGS+L T + + K L
Sbjct: 284 YALLLDIVKPTCRRSTCFTKGYGHYVEGTGSVLQTAVDVQLESVFKHIDELPEEEKLIKL 343
Query: 332 KEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
LRYFTPRE+ANLH FP +F FP ++++Q Y LLGNSL++ VVA L+ L
Sbjct: 344 STLKLRYFTPREIANLHGFPLEFGFPEKVTVKQCYRLLGNSLNVHVVAKLISILL 398
>gi|301766512|ref|XP_002918675.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Ailuropoda
melanoleuca]
Length = 391
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 216/398 (54%), Gaps = 31/398 (7%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E R LE YSGIGGM +L ++ V A VV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 EPLRALELYSGIGGMHQALRESCVPAHVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D + L+SPPCQP+TR GLQ +D R S L IL+++P K P + +ENV
Sbjct: 62 LEEFDKLSFNTILMSPPCQPFTRIGLQGDVTDPRTNSLLYILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ-- 185
GFE S +I+ L N + QEF+LSP G+P SR RYF +AK +PL F+
Sbjct: 122 KGFEVSSARDLLIQTLENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQVPGQ 181
Query: 186 -LLNNQLLRSPSPLLGNDD--MTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNT 242
L+ + S P D + + +P+ +DK C E L + ++++
Sbjct: 182 VLMEFPKIESEHPERNTIDGENKIEREKIEPNICFDK-SRQCSGKEAILFKLETVEEIDR 240
Query: 243 ETGFLS-TGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCC 301
+ S + DF E+ V+V++ +FL P SL+ R+ +DIV P +R C
Sbjct: 241 KLHQDSDLSVQMLKDF--LEDDVDVNQ-----YFLPPKSLL-RYALLLDIVKPTCRRSTC 292
Query: 302 FTKSYYRYVKGTGSLLATVQP-------------KNKGKASSLKEQHLRYFTPREVANLH 348
FTK Y Y++GTGS+L T + + K + L LRYFTP+E+ANL
Sbjct: 293 FTKGYGSYIEGTGSVLQTTEDVQIEDIYKSLTNLSQEEKIAKLLMLKLRYFTPKEIANLL 352
Query: 349 SFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
FP +F FP ++++QRY LLGNSL++ VVA L++ L+
Sbjct: 353 GFPSEFGFPEKITVKQRYRLLGNSLNVRVVAKLIKILY 390
>gi|13096616|pdb|1G55|A Chain A, Structure Of Human Dnmt2, An Enigmatic Dna
Methyltransferase Homologue
Length = 343
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/392 (37%), Positives = 208/392 (53%), Gaps = 66/392 (16%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 1 EPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 60
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D L+SPPCQP+TR G Q +D+R SFL IL+++P K P + +ENV
Sbjct: 61 LEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENV 120
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQLL 187
GFE S T +I+ + N + QEF+LSP G+P SR RYF +AK +PL F
Sbjct: 121 KGFEVSSTRDLLIQTIENXGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPF----- 175
Query: 188 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFL 247
++P +L I + +Q D S ++ FLE
Sbjct: 176 -----QAPGQVLMEFPKIEIHRKNQQDSDL-----SVKMLKDFLE--------------- 210
Query: 248 STGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYY 307
DD ++ +L+P + R+ +DIV P +R CFTK Y
Sbjct: 211 -------DD-------------TDVNQYLLPPKSLLRYALLLDIVQPTXRRSVCFTKGYG 250
Query: 308 RYVKGTGSLLAT---VQPKNKGKA---SSLKEQ-------HLRYFTPREVANLHSFPGDF 354
Y++GTGS+L T VQ +N K+ S +EQ LRYFTP+E+ANL FP +F
Sbjct: 251 SYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEF 310
Query: 355 QFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
FP ++++QRY LLGNSL++ VVA L++ L+
Sbjct: 311 GFPEKITVKQRYRLLGNSLNVHVVAKLIKILY 342
>gi|348553999|ref|XP_003462813.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Cavia
porcellus]
Length = 391
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 217/401 (54%), Gaps = 39/401 (9%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQNLT 69
E RVLE YSGIGGM ++L ++ + AQVV A D+N AN+VY+ NF + I+ +T
Sbjct: 2 EPLRVLELYSGIGGMHHALRESHIPAQVVAAIDVNTVANEVYKYNFPDTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D + L+SPPCQP+TR GLQ +D R SFL +L+++P K P + +ENV
Sbjct: 62 LEEFDKLSFNMILMSPPCQPFTRIGLQGDMTDRRTNSFLHVLDILPRLQKLPRYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ-- 185
GFE S T +IE + N + QEF+LSP G+P SR RYF +AK +PL F+
Sbjct: 122 KGFEVSSTRDLLIETIENCGFRYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQ 181
Query: 186 -LLNNQLLRS--PSPLLGNDDMTVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQV 240
L++ + S P + + K +P+ +D+ + D + LE + D+
Sbjct: 182 VLMDFPKIESEHPQKYAIDAENRNNVKKIEPNTCFDRNPQCSGKDTILFKLETAEEIDRK 241
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
+ + L+ + DF E V ++ +++P + R+ +DIV P +R
Sbjct: 242 HQQNNDLT--VQMLKDFLEDE--------VDMNLYILPPKSLLRYALLLDIVKPTCRRST 291
Query: 301 CFTKSYYRYVKGTGSLLATV----------------QPKNKGKASSLKEQHLRYFTPREV 344
CFTK Y YV+GTGS+L T Q + K S LK LRYFTP+E+
Sbjct: 292 CFTKGYGSYVEGTGSVLQTAEDVQIEAIYKSLTNLPQEEQIAKLSMLK---LRYFTPKEI 348
Query: 345 ANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
ANL FP +F FP ++++Q Y LLGNSL++ VVA L++ L
Sbjct: 349 ANLLGFPPEFGFPKKITMKQCYRLLGNSLNVHVVAKLIKIL 389
>gi|351705087|gb|EHB08006.1| tRNA (cytosine-5-)-methyltransferase [Heterocephalus glaber]
Length = 400
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 158/411 (38%), Positives = 224/411 (54%), Gaps = 48/411 (11%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSGIGGM ++L ++ V QVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 ETLRVLELYSGIGGMHHALRESSVPGQVVAAIDVNTVANEVYKHNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D + L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV
Sbjct: 62 LEEFDKLSFNMILMSPPCQPFTRIGLQGDMTDRRTNSFLHILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILS--------PLQF-GVPYSRPRYFCLAK--RK 178
GFE S T +IE + N + QEF+LS PLQ G+P SR RYF +AK +
Sbjct: 122 KGFEVSSTRDLLIETIENCGFQYQEFLLSPPSVAALLPLQLNGIPNSRLRYFLIAKLQSE 181
Query: 179 PLSFRCQ---LLNNQLLRSPSPLLGNDDMTVIT--KHDQPDDSWDKLLESC--DPVERFL 231
PL F+ L++ + S P D+ + K +P +DK + D + L
Sbjct: 182 PLPFQAPGQVLMDFPKIESEHPQKHAVDVENRSNIKKIEPITHFDKSPQCSGKDTILFKL 241
Query: 232 EFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDI 291
E + D+ + + +S + DF E+ +E D+ +FL P SL+ R+ +DI
Sbjct: 242 ETAEEIDRKHQQDSDVS--VQMLKDF--LEDDIETDQ-----YFLPPKSLL-RYALLLDI 291
Query: 292 VYPDSKRCCCFTKSYYRYVKGTGSLLATV----------------QPKNKGKASSLKEQH 335
V P +R CFTK Y Y++GTGS+L T Q + K S LK
Sbjct: 292 VKPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQIETVYKSLNNLPQEEQITKLSVLK--- 348
Query: 336 LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
LRYFTP+E+ANL FP +F FP ++++Q Y LLGNSL++ VVA L++ L+
Sbjct: 349 LRYFTPKEIANLLGFPPEFGFPKKITMKQCYRLLGNSLNVHVVAKLIKILY 399
>gi|72255517|ref|NP_001026813.1| tRNA (cytosine(38)-C(5))-methyltransferase [Rattus norvegicus]
gi|115311703|sp|Q4G073.1|TRDMT_RAT RecName: Full=tRNA (cytosine(38)-C(5))-methyltransferase; AltName:
Full=DNA (cytosine-5)-methyltransferase-like protein 2;
Short=Dnmt2
gi|71051331|gb|AAH98700.1| TRNA aspartic acid methyltransferase 1 [Rattus norvegicus]
gi|149021112|gb|EDL78719.1| DNA methyltransferase 2 [Rattus norvegicus]
Length = 391
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 150/408 (36%), Positives = 207/408 (50%), Gaps = 53/408 (12%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLT 69
E RVLE YSGIGGM ++L ++ V A VV A D++ AN+VY+ NF H I+ ++
Sbjct: 2 EPLRVLELYSGIGGMHHALRESRVPAHVVAAIDVSTVANEVYKHNFPHTHLLAKTIEGIS 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D + L+SPPCQP+TR GLQ SD R SFL IL+++P K P + +ENV
Sbjct: 62 LEEFDKLSFNMILMSPPCQPFTRIGLQGDMSDRRTNSFLYILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC--Q 185
GFE S T +I+ + + QEF+LSP G+P SR RYF +AK +PL F+ Q
Sbjct: 122 KGFEVSSTRGLLIQTMEACGFQYQEFLLSPSSLGIPNSRLRYFLIAKLQSEPLCFQAPGQ 181
Query: 186 LLN---NQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFL----------- 231
+L N P ++ + + +PD D C + L
Sbjct: 182 ILMEFPNSGTVQPQEYAVVEEGKLRVRTREPDVCLDSSSTQCSGQDSILFKHETAADIDR 241
Query: 232 -EFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMD 290
+S V GFL G A +L+P + R+ +D
Sbjct: 242 KRQQDSDLSVQMLKGFLEDGDTA--------------------QYLLPAKSLLRYALLLD 281
Query: 291 IVYPDSKRCCCFTKSYYRYVKGTGSLLAT---VQPKN----------KGKASSLKEQHLR 337
IV P S+R CFTK Y Y++GTGS+L T VQ +N + K + L LR
Sbjct: 282 IVKPTSRRSMCFTKGYGSYIEGTGSVLQTAEDVQIENIYKSLPDLPPEEKIAKLSMLKLR 341
Query: 338 YFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
YFTP+E+ANL FP +F FP +++QRY LLGNSL++ VV+ LL L
Sbjct: 342 YFTPKEIANLLGFPPEFGFPEKTTVKQRYRLLGNSLNVHVVSKLLTVL 389
>gi|308805380|ref|XP_003080002.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri]
gi|116058461|emb|CAL53650.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri]
Length = 394
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 153/379 (40%), Positives = 199/379 (52%), Gaps = 47/379 (12%)
Query: 15 VLEFYSGIGGMRYSL-MKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
V E Y GIG M ++ V A+ V A+D+N A D Y N G RP N+ ++ L
Sbjct: 20 VAEMYCGIGVMSLAMRWVRRVRARTVVAYDLNPNACDAYARNHGTRPLAKNLAGVSMEAL 79
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPH--TVKPPHMLFVENVVG 131
GA AWL+SPPCQP+TRQG + D RA SF +++E K P +FVENVVG
Sbjct: 80 GKIGAEAWLMSPPCQPFTRQGKRLDVEDGRADSFARLVEETTKLSVEKRPRYVFVENVVG 139
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQL 191
FETS +IE L ++ QEFIL+P FGVPYSRPRYF L R +FR + N +
Sbjct: 140 FETSKMRELLIEKLREMEFHVQEFILTPTMFGVPYSRPRYF-LCARTTHAFRDAVDN--I 196
Query: 192 LRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGT 251
R+P P + I K+D+ D+ + P+ RFL+ NS + E
Sbjct: 197 RRAPPPCELSHKRHWIPKYDETMDADVDVA----PLSRFLDSENS--DIWRENALRQ--- 247
Query: 252 AAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVK 311
DD I+R +DIV C CFTKSY++YVK
Sbjct: 248 ---DD-------------------------IDRAKGCIDIVSSSDTTCNCFTKSYFKYVK 279
Query: 312 GTGSLLATV---QPKNKGKASSLKEQ-HLRYFTPREVANLHSFPGDFQFPHHLSLRQRYA 367
GTGS++A + G+ ++ LRYFT EV LHS P DF++P LS RQRY
Sbjct: 280 GTGSVVANRLVDKSTWDGRTGEGEDDVRLRYFTVDEVMRLHSIPSDFEWPEELSKRQRYT 339
Query: 368 LLGNSLSIAVVAPLLQYLF 386
LLGNS+S+A VAPLL+YLF
Sbjct: 340 LLGNSMSVACVAPLLEYLF 358
>gi|354482485|ref|XP_003503428.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like
[Cricetulus griseus]
gi|344245952|gb|EGW02056.1| tRNA (cytosine-5-)-methyltransferase [Cricetulus griseus]
Length = 391
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 152/400 (38%), Positives = 218/400 (54%), Gaps = 37/400 (9%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLT 69
E RVLE YSGIGGM ++L ++ + A VV A D+N AN+VY+ NF H I+ ++
Sbjct: 2 EPLRVLELYSGIGGMHHALRESCIPAHVVAAIDVNTVANEVYKHNFPHTHLLAKTIEGIS 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D + L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV
Sbjct: 62 LEEFDKLSFNMILMSPPCQPFTRIGLQGDMTDPRTNSFLYILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC--Q 185
GFE S T +I+ + + QEF+LSP G+P SR RYF +AK +PL F+ Q
Sbjct: 122 KGFEVSSTRGLLIQTIEACGFQHQEFLLSPSSLGIPNSRLRYFLIAKLQSEPLPFQAPDQ 181
Query: 186 LLNN----QLLRSPSPLLGNDDMTVITKHDQPD---DSWDKLLESCDPVERFLEFSNSGD 238
+L +++ S + ++ T+ K +P DS D + LE + D
Sbjct: 182 ILMEFPKIATIQTQSYAVVAEN-TLRVKRPEPSTCFDSSSTQYSRKDSILFKLETAEEID 240
Query: 239 QVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKR 298
+ + + LS + DF E+T + +P L+ R+ +DIV P S+R
Sbjct: 241 RKHQQDNDLS--VQMLKDFLEDEDT---------SQYFLPPKLLLRYALLLDIVKPTSRR 289
Query: 299 CCCFTKSYYRYVKGTGSLLAT---VQPKN----------KGKASSLKEQHLRYFTPREVA 345
CFTK Y Y++GTGS+L T VQ +N + K + L LRYFTPRE+A
Sbjct: 290 SMCFTKGYGSYIEGTGSVLQTAEDVQIENVFKSLNDLPPEEKIAKLSTLKLRYFTPREIA 349
Query: 346 NLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
NL FP +F FP ++++QRY LLGNSL++ VVA L+ L
Sbjct: 350 NLQGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLITIL 389
>gi|26341152|dbj|BAC34238.1| unnamed protein product [Mus musculus]
Length = 415
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 212/411 (51%), Gaps = 59/411 (14%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSGIGGM ++L ++ + A VV A D+N AN+VY+ NF H I+ ++
Sbjct: 2 EPLRVLELYSGIGGMHHALRESHIPAHVVAAIDVNTVANEVYKHNFPHTHLLSKTIEGIS 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ D + L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV
Sbjct: 62 LEDFDKLSFNMILMSPPCQPFTRIGLQGDMTDPRTTSFLYILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 189
GFE S T +I+ + + QEF+LSP G+P SR RYF +AK + F Q
Sbjct: 122 KGFEVSSTRGLLIQTIEACGFQYQEFLLSPSSLGIPNSRLRYFLIAKLQSEPFPFQAPGQ 181
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249
L+ P + + + QP V+R +G ++ E+ ST
Sbjct: 182 ILMEFPKIVTVEPQKYAVVEESQPR------------VQR------TGPRICAESS--ST 221
Query: 250 GTAAVDDFGAAEETVE-------VDRCVSI------------DHFLVPLSLIERWGSAMD 290
++ D ETVE D +S+ D +L+P L+ R+ +D
Sbjct: 222 QSSGKDTILFKLETVEERDRKHQQDSDLSVQMLKDFLEDGDTDEYLLPPKLLLRYALLLD 281
Query: 291 IVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ---------------PKNK-GKASSLKEQ 334
IV P S+R CFTK Y Y++GTGS+L + P+ K K S LK
Sbjct: 282 IVKPTSRRSMCFTKGYGSYIEGTGSVLQATEDAQIENIYKSLPDLPPEEKIAKLSMLK-- 339
Query: 335 HLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
LRYFTP+E+ANL FP +F FP +++QRY LLGNSL++ VVA LL L
Sbjct: 340 -LRYFTPKEIANLQGFPPEFGFPEKTTVKQRYRLLGNSLNVHVVAKLLTVL 389
>gi|161016803|ref|NP_034197.3| tRNA (cytosine(38)-C(5))-methyltransferase [Mus musculus]
gi|20141317|sp|O55055.2|TRDMT_MOUSE RecName: Full=tRNA (cytosine(38)-C(5))-methyltransferase; AltName:
Full=DNA (cytosine-5)-methyltransferase-like protein 2;
Short=Dnmt2; AltName: Full=DNA methyltransferase homolog
MmuIIP; Short=DNA MTase homolog MmuIIP; Short=M.MmuIIP;
AltName: Full=Met-2
gi|2627433|gb|AAC53529.1| putative DNA methyltransferase [Mus musculus]
gi|56971714|gb|AAH87892.1| TRNA aspartic acid methyltransferase 1 [Mus musculus]
gi|148676105|gb|EDL08052.1| DNA methyltransferase 2 [Mus musculus]
Length = 415
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 212/411 (51%), Gaps = 59/411 (14%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSGIGGM ++L ++ + A VV A D+N AN+VY+ NF H I+ ++
Sbjct: 2 EPLRVLELYSGIGGMHHALRESHIPAHVVAAIDVNTVANEVYKHNFPHTHLLSKTIEGIS 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ D + L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV
Sbjct: 62 LEDFDKLSFNMILMSPPCQPFTRIGLQGDMTDPRTTSFLYILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 189
GFE S T +I+ + + QEF+LSP G+P SR RYF +AK + F Q
Sbjct: 122 KGFEVSSTRGLLIQTIEACGFQYQEFLLSPSSLGIPNSRLRYFLIAKLQSEPFPFQAPGQ 181
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249
L+ P + + + QP V+R +G ++ E+ ST
Sbjct: 182 ILMEFPKIVTVEPQKYAVVEESQPR------------VQR------TGPRICAESS--ST 221
Query: 250 GTAAVDDFGAAEETVE-------VDRCVSI------------DHFLVPLSLIERWGSAMD 290
++ D ETVE D +S+ D +L+P L+ R+ +D
Sbjct: 222 QSSGKDTILFKLETVEERDRKHQQDSDLSVQMLKDFLEDGDTDEYLLPPKLLLRYALLLD 281
Query: 291 IVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ---------------PKNK-GKASSLKEQ 334
IV P S+R CFTK Y Y++GTGS+L + P+ K K S LK
Sbjct: 282 IVKPTSRRSMCFTKGYGSYIEGTGSVLQAAEDAQIENIYKSLPDLPPEEKIAKLSMLK-- 339
Query: 335 HLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
LRYFTP+E+ANL FP +F FP +++QRY LLGNSL++ VVA LL L
Sbjct: 340 -LRYFTPKEIANLQGFPPEFGFPEKTTVKQRYRLLGNSLNVHVVAKLLTVL 389
>gi|348536610|ref|XP_003455789.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like
[Oreochromis niloticus]
Length = 382
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 154/404 (38%), Positives = 209/404 (51%), Gaps = 56/404 (13%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLTAAE 72
RVLE YSGIGGM Y+L ++ + AQVV A DIN AN VY+ NF + I+ +T E
Sbjct: 5 RVLELYSGIGGMHYALKESGIPAQVVTAIDINTTANQVYKHNFPDTALWNKTIEGITLDE 64
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
+ L+SPPCQP+TR GLQ +D R SFL IL+L+P + P + +ENV GF
Sbjct: 65 FNKLSFDMILMSPPCQPFTRIGLQGDVTDPRTKSFLYILDLLPRLQRLPRFILLENVKGF 124
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 192
ETS A++++ L Y QE ++SP+ G+P SR RYF +AK + LN Q
Sbjct: 125 ETSSARARLVKTLTECGYTFQEIMISPISVGIPNSRLRYFLIAK-----ISTEDLNTQ-- 177
Query: 193 RSPS------PLLGNDDMT--------VITKHDQPDDSWDKL--LESCDPVERFLEFSNS 236
+PS P L D + QP++ D L LE+ +R + NS
Sbjct: 178 -APSKILDFFPHLAESDSSEHPTFLSPACQGASQPEEGTDVLFKLETTAEAQRKIR-QNS 235
Query: 237 GDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDS 296
V FL E +EV+ ++ +L+P + R+G +DIV P
Sbjct: 236 NLSVKQIKEFL-------------EPQMEVN----MEPYLLPPKTLLRYGLVLDIVQPTC 278
Query: 297 KRCCCFTKSYYRYVKGTGSLLATV-------------QPKNKGKASSLKEQHLRYFTPRE 343
+R CFTK Y RYV+GTGS+L Q + K L + LRYF+PRE
Sbjct: 279 RRSVCFTKGYGRYVQGTGSVLQCCMETKIESVFMGLDQCSEEEKLQRLLKLKLRYFSPRE 338
Query: 344 VANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
VANL FP + FP + Q+Y LLGNSL++ VVA LLQ L +
Sbjct: 339 VANLMGFPQNLIFPEKIPTIQQYRLLGNSLNVVVVAKLLQLLVS 382
>gi|145207311|gb|AAI14323.2| TRNA aspartic acid methyltransferase 1 [Danio rerio]
Length = 381
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 213/401 (53%), Gaps = 43/401 (10%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQN 67
+ E RV E YSGIGGM Y+L ++ V A+VV A D+N AN +Y+ NF + I+
Sbjct: 3 NTERLRVFELYSGIGGMHYALKESLVPAEVVAAVDVNTTANLIYKHNFPTTQLLPKTIEG 62
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+T + D L+SPPCQP+TR GLQ +D R SFL IL+L+P K P + +E
Sbjct: 63 MTLQDFDRLNFDMILMSPPCQPFTRIGLQGDVADPRTKSFLYILDLLPRLSKRPRFILLE 122
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 187
NV GFE+S +++ L DY QEF++SP G+P SR RYF +AKR P +F +
Sbjct: 123 NVKGFESSAARDALLQTLRECDYSFQEFLISPTSLGIPNSRLRYFLIAKRAPETFSFP-V 181
Query: 188 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKL-------LESCDPVERFLEFSNSGDQV 240
+ +++ D ++V +D P S + LE+ + +ER + NS + V
Sbjct: 182 STEIIEGFPMSESTDGLSV--PYDHPTSSASEREKTIMFKLETEEDLERKRK-QNSQESV 238
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
FL EE +E+ +L+P + R+ MDIV P S+R
Sbjct: 239 RRLLDFLQ----------EEEEDMEL--------YLLPPKTLLRYALVMDIVQPSSRRSV 280
Query: 301 CFTKSYYRYVKGTGSLLATV-------------QPKNKGKASSLKEQHLRYFTPREVANL 347
CFTK Y YV+GTGS+L + Q + K L LRYFTPRE++ L
Sbjct: 281 CFTKGYGHYVEGTGSVLQSCMDVDLETVFKNLDQLSEEDKLKQLLRLKLRYFTPREISRL 340
Query: 348 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
FP F FP H+S +Q+Y +LGNSL++ VV+ L++ + ++
Sbjct: 341 MGFPDHFTFPKHISFKQQYRVLGNSLNVHVVSHLIRLMLSK 381
>gi|449662352|ref|XP_002166687.2| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Hydra
magnipapillata]
Length = 388
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 136/394 (34%), Positives = 210/394 (53%), Gaps = 29/394 (7%)
Query: 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNL 68
G + +VLEFYSGIGG+ Y+L A VS V AF+IN AN VY NF Q NI+ L
Sbjct: 2 GPSLKVLEFYSGIGGVHYALTYAGVSVHVEAAFEINTSANSVYRHNFPQTTLLQKNIEGL 61
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
+L+ + A W +SPPCQPYTR G Q+ S D RA SF K++ ++ PP +F+EN
Sbjct: 62 NLEDLEHFNADVWTMSPPCQPYTRLGKQEASCDPRAKSFKKLMNILMKMTSPPSFIFLEN 121
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK-RKPLSFRCQLL 187
V GFE SD+ + IL + Y TQ F+LSP+ FG+P SR RY+ +A+ +K +F+
Sbjct: 122 VKGFEVSDSCEDFLMILNSKGYYTQSFLLSPIDFGIPNSRLRYYLIARYQKKFNFK---- 177
Query: 188 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFL 247
+ P+ N ++ D + L S + + ++ + + N+ + +
Sbjct: 178 -----TTQKPICLNGNLCECEGLDM--ECACTALASVVQLYKPMKIKDILNVDNSVSSEI 230
Query: 248 STGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYY 307
++ + D + ++ R I + S++ R+ S DIV DS + CCFT Y
Sbjct: 231 NSSSFCEPDLKKMLDLLQ-KRSFPIKFTKISHSILLRYYSLFDIVDSDSNKSCCFTSGYS 289
Query: 308 RYVKGTGSL---------------LATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPG 352
R+++GTGSL L+ + N+ L+ LR+F+P E+A L FP
Sbjct: 290 RFIEGTGSLFSCLPQSDRNLILNKLSITENDNESNIDLLESLQLRFFSPEEIAALLCFPI 349
Query: 353 DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
F FP ++ +Q+Y LLGNS+++ VVA +++Y
Sbjct: 350 CFSFPDKITEKQKYKLLGNSVNVLVVANVMRYFL 383
>gi|66806465|ref|XP_636955.1| DNA -methyltransferase [Dictyostelium discoideum AX4]
gi|74852778|sp|Q54JH6.1|CMT1_DICDI RecName: Full=DNA (cytosine-5)-methyltransferase
gi|60465358|gb|EAL63449.1| DNA -methyltransferase [Dictyostelium discoideum AX4]
Length = 379
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 139/394 (35%), Positives = 207/394 (52%), Gaps = 51/394 (12%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
E RVLEFYSGIGGM Y L ++ V QV+++FDIN AN Y+ F Q +I++ +
Sbjct: 2 EQLRVLEFYSGIGGMHYGLQESGVDFQVIQSFDINTNANLNYKYTFNEDSSQKSIESYSV 61
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
EL+ + A+AWL+SPPCQP+TR GLQK D R SF +L+++ PP + +ENV
Sbjct: 62 EELEGFKANAWLMSPPCQPFTRLGLQKDDQDNRTNSFFHLLDVLTKIKDPPTYILIENVF 121
Query: 131 GFE---TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK-PLSFRC-Q 185
GF +S+T +++ L +Y QEF LSP QFG+ R RYFC+AKR L+F+ Q
Sbjct: 122 GFAKKGSSNTRDHLLDTLIKMNYSFQEFHLSPQQFGLANQRLRYFCIAKRNGKLNFKKEQ 181
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQ-------PDDSWDKLLESCDPVERFLEFSNSGD 238
+N+ + +++ K+D P + LE CD + + + + D
Sbjct: 182 DKHNEKVDENKLNNNSNNNNEQNKYDNLKILDHIPGYDFHTTLEECDEISNYFDKDLTDD 241
Query: 239 QVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKR 298
++ + + VP +L+ G DI DSK
Sbjct: 242 EL-------------------------------YEKYKVPHNLLLSKGMLFDIKQKDSKT 270
Query: 299 CCCFTKSYYRYVKGTGSLLATVQPKNKGKA-----SSLKEQHLRYFTPREVANLHSFPGD 353
C TKSY ++++GTGS+ +Q N KA SL LRYF+P+E+ LH FP +
Sbjct: 271 SNCVTKSYGKFIEGTGSI---IQMDNNFKADINDNKSLIPLKLRYFSPKEITRLHGFPEE 327
Query: 354 FQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
F+F L+ Q Y L+GNSL++ +V+ LL+ L +
Sbjct: 328 FKFSPKLTTIQCYRLIGNSLNVKIVSELLKVLVS 361
>gi|340381658|ref|XP_003389338.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like
[Amphimedon queenslandica]
Length = 373
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 144/389 (37%), Positives = 200/389 (51%), Gaps = 64/389 (16%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAEL 73
V+EFYSGIGG Y++ + ++ +++ A DIN AN VY+ NF + + Q NI L+A EL
Sbjct: 34 VVEFYSGIGGWHYAIRETGLNLKILAAVDINTTANQVYKHNFPNTKVLQRNILGLSAQEL 93
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
D + A+ + LSPPCQP+TRQG + D R SF ++ ++ KPP + +ENV GFE
Sbjct: 94 DSFLANLFTLSPPCQPFTRQGKNEDDIDYRTDSFFHLMGILSAMQKPPQYIMMENVKGFE 153
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLR 193
S T + +L Y QE+++SP QFG+P SR RY+ LA+ P +F+
Sbjct: 154 LSRTRGHFVHVLKELGYTFQEYLISPKQFGIPNSRLRYYLLARLSPRNFKA--------- 204
Query: 194 SPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAA 253
+PL D K+ P D L+ CD ++
Sbjct: 205 --APL---QDTVEHLKYYIPTSFHDIHLK-CDI------------------------SSY 234
Query: 254 VDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGT 313
+DD E+D + FLVP ++E++ +DIV S CCFT+ YY Y GT
Sbjct: 235 LDDLS------EID----VQQFLVPDRILEKYAQGLDIVSAKSHSSCCFTRGYYHYAVGT 284
Query: 314 GSLLA--------------TVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHH 359
GS+L Q N SLKE LRYFTP+EVA L SFP FP
Sbjct: 285 GSVLHHDCSVDLALAYQCYAEQKNNCDGIKSLKELKLRYFTPQEVAKLMSFPASHTFPTS 344
Query: 360 LSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
+S +Q Y LLGNS+++ VVA LL YL +Q
Sbjct: 345 VSNKQCYKLLGNSVNVFVVATLLCYLCSQ 373
>gi|198430517|ref|XP_002128135.1| PREDICTED: similar to DNA methyltransferase 2 [Ciona intestinalis]
Length = 343
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 143/380 (37%), Positives = 218/380 (57%), Gaps = 52/380 (13%)
Query: 14 RVLEFYSGIGGMRYSLMKADV-SAQVVEAFDINDKANDVYELNF-GHRPYQGNIQNLTAA 71
+VLE YSGIGGM Y+L+ A++ + +VV + DI+ A+ VY+ NF G + ++ +I+ +A
Sbjct: 6 KVLELYSGIGGMHYALLGANLKNCEVVCSVDISPAASLVYKHNFPGTKHWERSIEGFSAK 65
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ D G + ++SPPCQP+TR GLQK +D R SF+ +++++P PP + +ENV G
Sbjct: 66 DFDNMGFNTLMMSPPCQPFTRVGLQKDINDPRTRSFIYLMKVLPQLSNPPTYILMENVKG 125
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQL 191
FE S H +++L +Y T +F+L+P QFGVP SR RY+ LAKRKPL F ++
Sbjct: 126 FENSKAHDMFLQVLEQLEYSTAQFLLTPKQFGVPNSRLRYYLLAKRKPLQFPDEV----- 180
Query: 192 LRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGT 251
+P+ ++ ++ + L+ C SN+G + N E + T
Sbjct: 181 -NTPNEVI---------------ETMPQALQKCLN-------SNAGKEQN-EKHTIKTLE 216
Query: 252 AAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVK 311
+++ AE T++ +H L +L+ R+ MDIV P + CFTKSY Y +
Sbjct: 217 NYLEE---AESTLK-------EHALTEKTLL-RYLQVMDIVTPRHQSSTCFTKSYGYYAE 265
Query: 312 GTGSLLATVQPKNKG---KASSLKEQHLRYFTPREVANLHSFPGD-FQFPHHLSLRQRYA 367
GTGS+L N G K S+ +LRYFT REVAN+ FP D F FP + + +Q+Y
Sbjct: 266 GTGSVL------NMGGEIKMSNPLHNNLRYFTAREVANIMCFPKDKFHFPENFTRKQKYK 319
Query: 368 LLGNSLSIAVVAPLLQYLFA 387
LLGNSL++ VV+ LL+ L
Sbjct: 320 LLGNSLNVYVVSCLLKLLIT 339
>gi|89941477|ref|NP_001018153.1| tRNA (cytosine-5-)-methyltransferase [Danio rerio]
gi|62433271|dbj|BAD95483.1| DNA methyltransferase [Danio rerio]
Length = 381
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 212/401 (52%), Gaps = 43/401 (10%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQN 67
+ E RV E YSGIGGM Y+L ++ V A+VV A D+N AN +Y+ NF + I+
Sbjct: 3 NTERLRVFELYSGIGGMHYALKESLVPAEVVAAVDVNTTANLIYKHNFPTTQLLPKTIEG 62
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+T + D L+SPPCQP+TR GLQ +D R SFL IL+L+P K P + +E
Sbjct: 63 MTLQDFDRLNFDMILMSPPCQPFTRIGLQGDVADPRTKSFLYILDLLPRLSKRPRFILLE 122
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 187
NV GFE+S +++ L DY QEF++SP G+P SR RYF +AKR P +F +
Sbjct: 123 NVKGFESSAARDALLQTLRECDYSFQEFLISPTSLGIPNSRLRYFLIAKRAPETFSFP-V 181
Query: 188 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKL-------LESCDPVERFLEFSNSGDQV 240
+ +++ D ++V +D P S + LE+ + +ER + NS + V
Sbjct: 182 STEIIEGFPMSESTDGLSV--PYDHPTSSASEREKTIMFKLETEEDLERKRK-QNSQESV 238
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
FL EE +E +L+P + R+ MDIV P S+R
Sbjct: 239 RRLLDFLQ----------EEEEDME--------PYLLPPKTLLRYALVMDIVQPSSRRSV 280
Query: 301 CFTKSYYRYVKGTGSLLATV-------------QPKNKGKASSLKEQHLRYFTPREVANL 347
CFTK Y YV+GTGS+L + Q + K L LRYFTPRE++ L
Sbjct: 281 CFTKGYGHYVEGTGSVLQSCMDVDLETVFKNLDQLSEEDKLKQLLRLKLRYFTPREISRL 340
Query: 348 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
FP F FP H+S +Q+Y +LGNSL++ VV+ L++ + ++
Sbjct: 341 MGFPDHFTFPKHISFKQQYRVLGNSLNVHVVSHLIRLMLSK 381
>gi|26325124|dbj|BAC26316.1| unnamed protein product [Mus musculus]
Length = 415
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 211/411 (51%), Gaps = 59/411 (14%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSGIGGM ++L K+ + A VV A D+N AN+VY+ NF H I+ ++
Sbjct: 2 EPLRVLELYSGIGGMHHALRKSHIPAHVVAAIDVNTVANEVYKHNFPHTHLLSKTIEGIS 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ D + L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV
Sbjct: 62 LEDFDKLSFNMILMSPPCQPFTRIGLQGDMTDPRTTSFLYILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 189
GFE S T +I+ + + QEF+LSP G+P SR RYF +AK + F Q
Sbjct: 122 KGFEVSSTRGLLIQTIEACGFQYQEFLLSPSSLGIPNSRLRYFLIAKLQSEPFPFQAPGQ 181
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249
L+ P + + + QP V+R +G ++ E+ ST
Sbjct: 182 ILMEFPKIVTVEPQKYAVVEESQPR------------VQR------TGPRICAESS--ST 221
Query: 250 GTAAVDDFGAAEETVE-------VDRCVSI------------DHFLVPLSLIERWGSAMD 290
++ D ETVE D +S+ D +L+P L+ R+ +D
Sbjct: 222 QSSGKDTILFKLETVEERDRKHQQDSDLSVQMLKDFLEDGDTDEYLLPPKLLLRYALLLD 281
Query: 291 IVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ---------------PKNK-GKASSLKEQ 334
IV S+R CFTK Y Y++GTGS+L + P+ K K S LK
Sbjct: 282 IVKHTSRRSMCFTKGYGSYIEGTGSVLQAAEDAQIENIYKSLPDLPPEEKIAKLSMLK-- 339
Query: 335 HLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
LRYFTP+E+ANL FP +F FP +++QRY LLGNSL++ VVA LL L
Sbjct: 340 -LRYFTPKEIANLQGFPPEFGFPEKTTVKQRYRLLGNSLNVHVVAKLLTVL 389
>gi|2895947|gb|AAC40130.1| putative DNA cytosine methyltransferase DNMT2 [Mus musculus]
Length = 415
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 150/411 (36%), Positives = 211/411 (51%), Gaps = 59/411 (14%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSGIGGM ++L ++ + A VV A D+N AN+VY+ NF H I+ ++
Sbjct: 2 EPLRVLELYSGIGGMHHALRESHIPAHVVAAIDVNTVANEVYKHNFPHTHLLSKTIEGIS 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ D + L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV
Sbjct: 62 LEDFDKLSFNMILMSPPCQPFTRIGLQGDMTDPRTTSFLYILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 189
GFE S T +I+ + + QEF+LSP G+P SR RY +AK + F Q
Sbjct: 122 KGFEVSSTRGLLIQTIEACGFQYQEFLLSPSSLGIPNSRLRYSLIAKLQSEPFPFQAPGQ 181
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249
L+ P + + + QP V+R +G ++ E+ ST
Sbjct: 182 ILMEFPKIVTVEPQKYAVVEESQPR------------VQR------TGPRICAESS--ST 221
Query: 250 GTAAVDDFGAAEETVE-------VDRCVSI------------DHFLVPLSLIERWGSAMD 290
++ D ETVE D +S+ D +L+P L+ R+ +D
Sbjct: 222 QSSGKDTILFKLETVEERDRKHQQDSDLSVQMLKDFLEDGDTDEYLLPPKLLLRYALLLD 281
Query: 291 IVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ---------------PKNK-GKASSLKEQ 334
IV P S+R CFTK Y Y++GTGS+L + P+ K K S LK
Sbjct: 282 IVKPTSRRSMCFTKGYGSYIEGTGSVLQAAEDAQIENIYKSLPDLPPEEKIAKLSMLK-- 339
Query: 335 HLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
LRYFTP+E+ANL FP +F FP +++QRY LLGNSL++ VVA LL L
Sbjct: 340 -LRYFTPKEIANLQGFPPEFGFPEKTTVKQRYRLLGNSLNVHVVAKLLTVL 389
>gi|348041390|ref|NP_001004959.2| tRNA (cytosine(38)-C(5))-methyltransferase [Xenopus (Silurana)
tropicalis]
Length = 395
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 152/400 (38%), Positives = 212/400 (53%), Gaps = 40/400 (10%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLTAAE 72
RVLE YSGIGGM L ++ V+A+VV A D+N AN+VY+ NF + P + +I+ L+ E
Sbjct: 6 RVLELYSGIGGMHCGLTESGVAAEVVAAVDVNTIANEVYKYNFPYTPLWPKSIEGLSLKE 65
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
LD L+SPPCQP+TR GLQ SD R SFL +L+++P K P + +ENV GF
Sbjct: 66 LDALSFDMILMSPPCQPFTRIGLQGDISDPRTKSFLYVLDVLPRLKKQPAYILLENVKGF 125
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 192
ETS+ +I L Y QEF+LSP G+P SR RYF +AK + F + L
Sbjct: 126 ETSEAREALIRTLEKGGYAYQEFLLSPTCLGIPNSRLRYFLIAKLQKEPFAFPTTSKILE 185
Query: 193 RSPSPLLGNDDMTVITKHDQPDDSWDKLLES-------CDPVERFL-EFSNSGDQVNTET 244
PS G+ + + P ++ S CDP + L + + + +T
Sbjct: 186 EFPSQCPGSKRI-IHCSESNPQARVEQKYSSCPLSGTDCDPEKTVLYKLETAVELQRKQT 244
Query: 245 GFLSTGTAAVDDF--GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCF 302
+ + DF G EE + +FL P SL+ R+ +DIV P +R CF
Sbjct: 245 QDNDSSVRMLQDFLEGNVEEMSQ--------YFLPPKSLL-RYALILDIVKPTCRRSTCF 295
Query: 303 TKSYYRYVKGTGSLLAT----------------VQPKNKGKASSLKEQHLRYFTPREVAN 346
TK Y YV+GTGS+L T + + K SSLK +RYFTPRE++N
Sbjct: 296 TKGYGHYVEGTGSVLQTATDVEIDTVYKSLDLLTEEEKLAKLSSLK---MRYFTPREISN 352
Query: 347 LHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
LH FP F FP ++ +QRY LLGNSL++ +V+ L+ L
Sbjct: 353 LHGFPATFGFPEEVTKKQRYRLLGNSLNVHIVSCLISTLL 392
>gi|327274474|ref|XP_003222002.1| PREDICTED: LOW QUALITY PROTEIN: tRNA
(cytosine-5-)-methyltransferase-like [Anolis
carolinensis]
Length = 391
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 152/418 (36%), Positives = 215/418 (51%), Gaps = 69/418 (16%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLT 69
E RVLE YSGIGGM Y+L +++ A++V A D+N AN+VY NF P + I+ ++
Sbjct: 2 EPLRVLELYSGIGGMHYALQASNILAEIVAAVDVNTVANEVYTHNFCTTPLWPKTIEGIS 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E + L+SPPCQP+TR G Q+ SD R SFL IL+++P K P L +ENV
Sbjct: 62 LKEFN----KXILMSPPCQPFTRIGQQRDVSDPRTRSFLYILDILPRLAKLPKYLLLENV 117
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQLL 187
GFETS ++I L ++ QEF+LSP G+P +R RYF +A+ +P F
Sbjct: 118 KGFETSSARDELIRTLEKCGFIYQEFLLSPTCLGIPNARLRYFLIARLQTEPFPFHV--- 174
Query: 188 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWDK----LLESCDPVERFLEFSNSGDQVNTE 243
P +L T DQ D + L+E+ P+ S S D
Sbjct: 175 -------PGKIL-----TDFPNQDQVDSERSRCSTGLMEAGSPLPTRETVSGSDD----- 217
Query: 244 TGFLSTGTAAVDDFGAAEET-VEVDRCVSIDH--------------------FLVPLSLI 282
+ G ++ DF ET E++R D+ +L+P +
Sbjct: 218 ----NDGHSSKRDFLFKLETEEELERKQQQDNDPSLQMLRNFLQGDGEDLSQYLLPPKSL 273
Query: 283 ERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT---VQPKNKGKA-SSLKEQH--- 335
R+ +DIV P +R CFTK Y Y++GTGS+L T +Q ++ K+ SL E+
Sbjct: 274 LRYALLLDIVTPSCRRSTCFTKGYGHYIEGTGSVLQTEEDIQLESVFKSFESLSEEEKLM 333
Query: 336 ------LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
LRYFTPRE+ANLH FP +F FP ++ +Q+Y LLGNSL+I VVA L+ L
Sbjct: 334 KLSLLKLRYFTPREIANLHGFPPEFGFPDKVTTKQQYRLLGNSLNIQVVAKLISLLVG 391
>gi|281212492|gb|EFA86652.1| DNA cytosine-5--methyltransferase [Polysphondylium pallidum PN500]
Length = 420
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/389 (34%), Positives = 203/389 (52%), Gaps = 50/389 (12%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG--------HRPYQ 62
+ R+LEF+SGIGGM YS + + + +V+++FDIN ANDVY N H+
Sbjct: 35 DKLRILEFFSGIGGMYYSTLISGIPFEVLQSFDINTNANDVYNYNISSKYPNPKKHKVNS 94
Query: 63 GNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH 122
+I LT EL+ + A+ WL+SPPCQP+TR GLQK D R SF+ +LE + +PP
Sbjct: 95 KSIDALTTKELESFRANTWLMSPPCQPFTRVGLQKDLQDNRTNSFVHLLEQLAALAEPPT 154
Query: 123 MLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
+ +ENV GFE S+ ++E Y QEF L+P QFG+P R RYFC+AK+ L+
Sbjct: 155 YILIENVYGFEKSNARDLLLETFNQLQYQFQEFHLTPTQFGLPNQRLRYFCIAKKVLLNN 214
Query: 183 RCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNT 242
+N + + ++ D+ ++ K + S E ++ NT
Sbjct: 215 DSNNNSNSNIDIKTKIVTKDNAIIL-----------KTIPSYQHTE--------NNETNT 255
Query: 243 ETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFL---VPLSLIERWGSAMDIVYPDSKRC 299
+L +E+ D +H+ +P L+ G DI + K
Sbjct: 256 IEQYL-------------DESYNTD-----EHYYKYKIPEKLLLSKGMLFDIKTINDKTT 297
Query: 300 CCFTKSYYRYVKGTGSLLA--TVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFP 357
CFTK+Y ++V+GTGS+L T + +SL LRYF+P+E+ H FP FQFP
Sbjct: 298 NCFTKAYSKFVEGTGSVLQLDTNYKADINVPNSLIPMKLRYFSPKEITRFHFFPEQFQFP 357
Query: 358 HHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
+++ Q Y L+GNSL+ +V+ LL+YLF
Sbjct: 358 PSVTVAQGYRLIGNSLNCKIVSELLKYLF 386
>gi|349501042|ref|NP_001079673.2| tRNA (cytosine(38)-C(5))-methyltransferase [Xenopus laevis]
Length = 396
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 153/394 (38%), Positives = 209/394 (53%), Gaps = 37/394 (9%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLTA 70
A RVLE YSG+GGM L ++ V+A+VV A D+N AN VY+ NF H P + I+ +T
Sbjct: 2 ALRVLELYSGVGGMHCGLAESGVAAEVVAAVDVNTNANKVYKYNFPHTPLWPKTIEGITL 61
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
ELD L+SPPCQP+TR GLQ SD RA SFL +L+++P K P + +ENV
Sbjct: 62 KELDALSFDMILMSPPCQPFTRIGLQGDISDPRAKSFLYVLDILPRLKKLPAYILLENVK 121
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 190
GFE+S+ +I L Y+ QEF+LSP G+P SR RYF +AK + F + N
Sbjct: 122 GFESSEAREALIGTLQKCGYVYQEFLLSPTCLGIPNSRLRYFLIAKLQTEPFAFPISNTI 181
Query: 191 LLRSPS--PLLGNDDMTVITKHDQPDDSWDKLLESC-------DPVERFLEFSNSGDQVN 241
L PS + + + P D+ SC P + FL + ++
Sbjct: 182 LEEFPSQHSIDPGRRRVIHCSENNPQAGADQKNPSCPFSGTDHGPEKTFLYKLETAQELE 241
Query: 242 TETGFLSTGTA-AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
+ G + + + DF E +VE +FL P SL+ R+ +DIV P +R
Sbjct: 242 RKQGQDNDASVRMLQDF--LETSVEEMS----QYFLPPKSLL-RYALILDIVRPTCRRST 294
Query: 301 CFTKSYYRYVKGTGSLLATVQ----------------PKNKGKASSLKEQHLRYFTPREV 344
CFTK Y YV+GTGS+L T + K SSLK +RYFTPRE+
Sbjct: 295 CFTKGYGHYVEGTGSVLQTATDVEIDSVYNSLELLNEEEKLAKLSSLK---MRYFTPREI 351
Query: 345 ANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVV 378
ANLH FP F FP ++ +QRY LLGNSL++ +V
Sbjct: 352 ANLHGFPETFGFPEEVTTKQRYRLLGNSLNVHIV 385
>gi|241832196|ref|XP_002414890.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
gi|215509102|gb|EEC18555.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
Length = 361
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/404 (36%), Positives = 197/404 (48%), Gaps = 78/404 (19%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQ 66
++ RVLE YSGIGGM ++ +VV A D+N AN Y NF R Q N+Q
Sbjct: 14 DNDRRLRVLELYSGIGGMHFACPPD--KTRVVAAVDVNTTANATYAFNFPETRLLQRNVQ 71
Query: 67 NLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
+LTA ELD +SPPCQP+TRQGLQ S D R+ SFL +L ++P PP + +
Sbjct: 72 SLTARELDALRPDVLTMSPPCQPFTRQGLQLDSQDPRSASFLSLLRVLPTLKHPPTYILL 131
Query: 127 ENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR--- 183
ENV GFETS T +++L + Y ++L+P QFGVP SR R++CLAK PL F
Sbjct: 132 ENVKGFETSSTCDAFLDVLRDGGYHAHRYLLTPTQFGVPNSRLRFYCLAKLNPLRFSDCP 191
Query: 184 --CQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVN 241
C NQ P P +T+ D+P + +D FLE ++
Sbjct: 192 TACDAECNQ---EPPP--------NVTRCDRPRELYD-----------FLEQTDED---- 225
Query: 242 TETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCC 301
S +L+P ++ R+ +DI S CC
Sbjct: 226 -----------------------------SCSDYLLPDRVLSRFAYILDIADATSTNTCC 256
Query: 302 FTKSYYRYVKGTGSLLAT------------VQPKNKGK---ASSLKEQHLRYFTPREVAN 346
FTK Y YV+GTGS+L VQP+ + L+ LRYFTP EVA
Sbjct: 257 FTKGYGHYVEGTGSVLLQASRDLMHEVYRHVQPRTAVQDDVLELLRTLRLRYFTPVEVAR 316
Query: 347 LHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQAG 390
L FP DF+FP L R RY LLGNS+++ VV L+++L G
Sbjct: 317 LMCFPDDFRFPPELKARHRYQLLGNSVNVCVVGSLVRHLLDDVG 360
>gi|328772423|gb|EGF82461.1| hypothetical protein BATDEDRAFT_3612, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 344
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 138/390 (35%), Positives = 206/390 (52%), Gaps = 61/390 (15%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ RVLEF+SGIGG+ Y L +A+ +A V+ +FD+N+ AN Y+ NFG +P +I LTA
Sbjct: 2 QPLRVLEFFSGIGGLHYGLERAESTATVLASFDVNEHANSCYQHNFGIKPSNKSIDTLTA 61
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+++ Y ++ WLLSPPCQP+T+ G D R+ + L+I+E++ H PP +FVENV
Sbjct: 62 KDIEKYDSNCWLLSPPCQPFTQGGKSLDHQDNRSLALLRIIEILQHIAIPPRFVFVENVP 121
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 190
FETS+ +++++ L +Y +E+++SP+Q G+ R RY+ AK
Sbjct: 122 NFETSECRSRLVQALDQCNYDVKEYLISPIQIGISNDRRRYYLAAK-------------- 167
Query: 191 LLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 250
LRS S G ++ SC L+ S+ ++++E S+G
Sbjct: 168 -LRS-SISTGKSNL------------------SC------LQTSHMITRLDSE----SSG 197
Query: 251 TAAVDDFGAAEETVEVDRCVSIDHFLVPLS-LIERWGSAMDIVYPDSKRCCCFTKSY-YR 308
A A T C I FLVP +++R D+V P RC CFTK+Y
Sbjct: 198 IAL--PIPPAISTYLEQHC-DISEFLVPEQYILKRKTFRFDLVKPTDTRCSCFTKAYGSH 254
Query: 309 YVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGD------------FQF 356
++ G+GS L T + ++ R+FTPRE+A LH FP D F+F
Sbjct: 255 HIIGSGSFLQTANLDVSSRVFAIVASRPRFFTPREIARLHGFPIDGVLNGSIGMLHTFEF 314
Query: 357 PHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
P + Q+Y LLGNSLS+ VVA LL+ LF
Sbjct: 315 PDSVPRSQQYKLLGNSLSVDVVAYLLKLLF 344
>gi|328768493|gb|EGF78539.1| hypothetical protein BATDEDRAFT_13083 [Batrachochytrium
dendrobatidis JAM81]
Length = 350
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 138/390 (35%), Positives = 206/390 (52%), Gaps = 61/390 (15%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ RVLEF+SGIGG+ Y L +A+ +A V+ +FD+N+ AN Y+ NFG +P +I LTA
Sbjct: 3 QPLRVLEFFSGIGGLHYGLERAESTATVLASFDVNEHANSCYQHNFGIKPSNKSIDTLTA 62
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+++ Y ++ WLLSPPCQP+T+ G D R+ + L+I+E++ H PP +FVENV
Sbjct: 63 KDIEKYDSNCWLLSPPCQPFTQGGKSLDHQDNRSLALLRIIEILQHIAIPPRFVFVENVP 122
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 190
FETS+ +++++ L +Y +E+++SP+Q G+ R RY+ AK
Sbjct: 123 NFETSECRSRLVQTLDQCNYDVKEYLISPIQIGISNDRRRYYLAAK-------------- 168
Query: 191 LLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 250
LRS S G ++ SC L+ S+ ++++E S+G
Sbjct: 169 -LRS-SISTGKSNL------------------SC------LQTSHMITRLDSE----SSG 198
Query: 251 TAAVDDFGAAEETVEVDRCVSIDHFLVPLS-LIERWGSAMDIVYPDSKRCCCFTKSY-YR 308
A A T C I FLVP +++R D+V P RC CFTK+Y
Sbjct: 199 IAL--PIPPAISTYLEQHC-DIPEFLVPEQYILKRKTFRFDLVKPTDTRCSCFTKAYGSH 255
Query: 309 YVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGD------------FQF 356
++ G+GS L T + ++ R+FTPRE+A LH FP D F+F
Sbjct: 256 HIIGSGSFLQTANLDVSSRVFAIVASRPRFFTPREIARLHGFPIDGVLNGSIGMLHTFEF 315
Query: 357 PHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
P + Q+Y LLGNSLS+ VVA LL+ LF
Sbjct: 316 PDSVPRSQQYKLLGNSLSVDVVAHLLKLLF 345
>gi|338721479|ref|XP_001916681.2| PREDICTED: LOW QUALITY PROTEIN: tRNA
(cytosine(38)-C(5))-methyltransferase-like [Equus
caballus]
Length = 392
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 147/388 (37%), Positives = 213/388 (54%), Gaps = 35/388 (9%)
Query: 23 GGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAW 81
G + M++ + AQVV A D+N AN+VY+ NF H + I+ +T E D +
Sbjct: 15 GDIGNQWMESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFNMI 74
Query: 82 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 141
L+SPPCQP+TR GLQ +D R SFL IL ++P K P + +ENV GFE S T +
Sbjct: 75 LMSPPCQPFTRIGLQGDVTDPRTNSFLYILNILPRLQKLPKYILLENVKGFEVSSTRDLL 134
Query: 142 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ---LLNNQLLRSPS 196
I+ + N + QEF+LSP G+P SR RYF +AK +PL F+ L+ + S
Sbjct: 135 IQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKIESEH 194
Query: 197 PLLGNDDM--TVITKHDQPD---DSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGT 251
P D + K +P+ DS D +LE P+ LE + D+ + + LS
Sbjct: 195 PEKHAIDAENQIEGKKIEPNIWSDSSDHVLEK-QPILFKLETAEEIDRKHQQDSDLS--V 251
Query: 252 AAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVK 311
+ DF E+ V+V++ +FL P SL+ R+ +DIV P +R CFTK Y Y++
Sbjct: 252 QMLKDF--LEDNVDVNQ-----YFLPPKSLL-RYALLLDIVKPTCRRSMCFTKGYGSYIE 303
Query: 312 GTGSLLATVQPKN----KGKASSLKEQH---------LRYFTPREVANLHSFPGDFQFPH 358
GTGS+L T + ++L ++ LRYFTPRE+ANL FP DF FP
Sbjct: 304 GTGSVLQTAEDVQIEYIYNSLTNLSQEEKLTKLLMLKLRYFTPREIANLLGFPPDFGFPE 363
Query: 359 HLSLRQRYALLGNSLSIAVVAPLLQYLF 386
++++QRY LLGNSL++ VVA L++ L+
Sbjct: 364 KITVKQRYRLLGNSLNVHVVAKLIKILY 391
>gi|443726123|gb|ELU13416.1| hypothetical protein CAPTEDRAFT_108989 [Capitella teleta]
Length = 360
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 133/400 (33%), Positives = 202/400 (50%), Gaps = 63/400 (15%)
Query: 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGN-IQNL 68
G+ RVLE +SGIGGM Y+L + ++ +V+ A DIN AND+Y+ NF I+++
Sbjct: 2 GDPLRVLELFSGIGGMHYALQETGINHEVIAAADINTVANDIYKHNFPDCLLMNRCIESI 61
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
+E +SPPCQP+TR G Q+ D R SFL +L++I + +FVEN
Sbjct: 62 QLSEFSRLRPDLITMSPPCQPFTRVGKQRDIDDPRTKSFLHLLKVISTLERSVKYIFVEN 121
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 188
V GF+ S+ H ++E L +DY+ QEF++SPLQ G+P SR RY+ +AK+KPL F+ +
Sbjct: 122 VKGFDGSEAHRMLLETLQAADYVMQEFLISPLQCGIPNSRLRYYLMAKKKPLKFQFDTTS 181
Query: 189 NQLLRSPSPLLGNDDMTVITKHDQPDDS-------WDKLLESCDPVERFLEFSNSGDQVN 241
+ P+ + +PD + +D+ C P+ +L+ S D
Sbjct: 182 QIMTELPACAASYLNHC----QSKPDSTASSSVPLYDRCAAMCRPLSSYLQEDMSHD--- 234
Query: 242 TETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCC 301
L+P + R+ MDIV P S CC
Sbjct: 235 ----------------------------------LLPEKFVHRFW-VMDIVKPSSTNSCC 259
Query: 302 FTKSYYRYVKGTGSLLAT-------VQPKNKGKA------SSLKEQHLRYFTPREVANLH 348
FTK Y +++G GS+L T + K K +++K+ LR+F+PRE+ANL
Sbjct: 260 FTKRYGHHIEGAGSVLQTNTDCEIDLTEYKKTKVYTAETEAAVKQLGLRFFSPREIANLM 319
Query: 349 SFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
FP F FP + S Q Y +LGNSL++ VVA L++ + +
Sbjct: 320 HFPAHFSFPANFSTVQTYRVLGNSLNVHVVAVLMKLMLIE 359
>gi|391328705|ref|XP_003738825.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Metaseiulus
occidentalis]
Length = 457
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 139/399 (34%), Positives = 206/399 (51%), Gaps = 82/399 (20%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSA--------QVVEAFDINDKANDVYELNFGHRPYQGNI 65
R+LE YSGIGGM Y+L +A + +VV A DIN AN+VY+ NF + I
Sbjct: 5 RLLELYSGIGGMHYALQEAAEESGLGPFSDFEVVAAVDINTVANEVYQSNFATKVLNRQI 64
Query: 66 QNLTAAELDMYGAHA---WLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH 122
Q+L+ ELD GA A +SPPCQP+TRQG Q D R SFL +L+++P P
Sbjct: 65 QSLSVKELD--GALACDLLTMSPPCQPFTRQGKQLGERDPRTQSFLHLLKVLPQLESRPK 122
Query: 123 MLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL-- 180
M+F+ENV GFE+S ++ L N ++ + LSP QFG+P SR RY+CLA R+ L
Sbjct: 123 MIFLENVRGFESSPVCHGFLQFLENCGFVYAQCSLSPTQFGIPNSRLRYYCLAIRQDLVQ 182
Query: 181 ---SFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSG 237
+ +++++ PS L ++ +T VE FL
Sbjct: 183 TAYKHMFSVDPSKIIQDPSFFLSESEVPPMTT-----------------VEHFL------ 219
Query: 238 DQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSK 297
R D L+ +++E+ +DIV P S
Sbjct: 220 ------------------------------RGAENDELLLDEAVLEKNCMVLDIVLPSST 249
Query: 298 RCCCFTKSYYRYVKGTGSLLATVQPK----------NKGKASSLKEQHLRYFTPREVANL 347
CCFTK+Y RY+KGTGS++A + PK ++ + +++K+ LR F+P EV++L
Sbjct: 250 NSCCFTKNYGRYMKGTGSVIAEL-PKARIDEAYSAPDETRLAAIKDLKLRLFSPEEVSSL 308
Query: 348 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
FP F+FP SL++RY LLGNS+++ +V+ LLQ++
Sbjct: 309 MCFPSSFRFPETTSLKERYHLLGNSVNVYIVSKLLQFML 347
>gi|383865745|ref|XP_003708333.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Megachile
rotundata]
Length = 359
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/391 (34%), Positives = 201/391 (51%), Gaps = 53/391 (13%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAAE 72
RVLE YSGIGGM Y+L ++ V ++ A DIN AN VY+ NF + NIQ+L E
Sbjct: 2 RVLELYSGIGGMHYALQESGVEGSIIAAVDINTIANSVYKYNFPNVLLMNRNIQSLVVQE 61
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
++ L+SPPCQPYTR GLQK D R+ S +LELI H +K + +ENV GF
Sbjct: 62 INDLNIDTILMSPPCQPYTRVGLQKDILDNRSSSLFHVLELI-HQIKSLKYILLENVKGF 120
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 192
E S+ +++ + + + +E I+SP QFG+P +R RY+ LAKR L F N ++
Sbjct: 121 EKSEMRNAVLKCMNDCRFHYKEIIISPCQFGIPNTRYRYYLLAKRNDLKF----CFNHII 176
Query: 193 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTA 252
+ L D + ++ P + L E C +E SN + L
Sbjct: 177 SNFH--LPEDILKLL-----PKSKHNLLAEKC-----CMESSNMDKKCYKLENILEN--- 221
Query: 253 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 312
V+D +++P L+++ MDI +S CCFTK+Y RYV+G
Sbjct: 222 -VED----------------SEYMIPKKLLQKRAWLMDIRTSESTGSCCFTKAYGRYVEG 264
Query: 313 TGSLLA---------------TVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFP 357
TGS+ ++ A +L++ LRYFTP+EV L FP +F FP
Sbjct: 265 TGSVYCPYSDELIKETFLKAREYNCQSPEAAETLEKLKLRYFTPKEVCRLMCFPEEFMFP 324
Query: 358 HHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
++ +Q+Y LLGNS+++ VV+ L+ L+ +
Sbjct: 325 KSITCKQKYRLLGNSINVHVVSRLIYLLYTE 355
>gi|322796386|gb|EFZ18927.1| hypothetical protein SINV_80475 [Solenopsis invicta]
Length = 354
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 133/385 (34%), Positives = 198/385 (51%), Gaps = 59/385 (15%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLTAAE 72
RV+E YSGIGGM Y+L ++ ++A+VV A DIN ANDVY NF NIQ++ A E
Sbjct: 10 RVMELYSGIGGMHYALCESGIAAKVVTAIDINPIANDVYHHNFPETVLINRNIQSINAQE 69
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
L+ L+SPPCQP+TR GL+K + D R+ S L IL LI +K + +ENV GF
Sbjct: 70 LNKLNIDIILMSPPCQPFTRLGLRKDTLDNRSCSLLHILNLIS-DLKDLKYILLENVKGF 128
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF---RCQLLNN 189
E S K+++ + + Y+ +EFILSP QFG+P SR RY+ LAK+ L F + L N+
Sbjct: 129 EVSQMRDKLVDCIESCGYIYREFILSPCQFGIPNSRHRYYLLAKKNNLKFCFEQSSLEND 188
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249
L L + + + K + + +++L + D + +E S
Sbjct: 189 LLPELFELLPKSKHLALAEKKGKINPKFNRLCYTLDNILENIEESK-------------- 234
Query: 250 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 309
+LVP ++++ +DI +S CCFTK Y Y
Sbjct: 235 -------------------------YLVPSKVLQKRAWVLDIRTSESNGSCCFTKGYGHY 269
Query: 310 VKGTGSL---------------LATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDF 354
+GTGS+ + + + + + L + LR+F+P+EV L FP DF
Sbjct: 270 AEGTGSVYCPFTDEIIRLKYNEVGSHENDSDKQLQILSDLKLRFFSPKEVCRLMCFPEDF 329
Query: 355 QFPHHLSLRQRYALLGNSLSIAVVA 379
FP H++ +Q+Y LLGNSL+I VV+
Sbjct: 330 HFPEHITDKQKYRLLGNSLNIHVVS 354
>gi|328782909|ref|XP_393991.3| PREDICTED: tRNA (cytosine-5-)-methyltransferase [Apis mellifera]
Length = 360
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 141/394 (35%), Positives = 203/394 (51%), Gaps = 59/394 (14%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAE 72
RVLE YSGIGGM Y+L ++ + +V A DIN AN +Y+ NF + NIQ+L+A E
Sbjct: 3 RVLELYSGIGGMHYALQESGIKGDIVAAVDINTVANSIYKYNFPNVLLLNCNIQSLSAQE 62
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
++ L+SPPCQPYTR GLQK D R+ S L +L LIP +K + +ENV GF
Sbjct: 63 INNLNIDTILMSPPCQPYTRIGLQKDMLDNRSSSLLHVLSLIPQ-IKTLKYILLENVKGF 121
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC---QLLNN 189
E S+ +++ + S + +E ILSP QFG+P +R RY+ LAK+ L F C +LN
Sbjct: 122 EKSEMRNAVLKCINTSGFNYKELILSPCQFGIPNTRYRYYLLAKKNNLEF-CFDQSVLNF 180
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249
+L S +L ++TK +S K ++C +E LE
Sbjct: 181 ELSDSILKILPKSKYNLLTKKSCTQNS--KTDKNCYTLENILEH---------------- 222
Query: 250 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 309
V +L+P L+E+ MDI S CCFTK+Y Y
Sbjct: 223 --------------------VEGSQYLIPKKLLEKRVWLMDIRTSQSNGSCCFTKAYSHY 262
Query: 310 VKGTGSLLATVQPKNKGKASS---------------LKEQHLRYFTPREVANLHSFPGDF 354
V+GTGS+ K +A S L++ LRYFTPRE+ L FP +F
Sbjct: 263 VEGTGSVYCPYSEKTIKEAFSEANKYERQSLEVSKILEKLMLRYFTPREICRLMCFPEEF 322
Query: 355 QFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
FP +++ +Q+Y LLGNS+++ VV+ L+ L+ +
Sbjct: 323 IFPEYITDKQKYRLLGNSINVYVVSRLIFLLYTE 356
>gi|195578681|ref|XP_002079192.1| GD23816 [Drosophila simulans]
gi|194191201|gb|EDX04777.1| GD23816 [Drosophila simulans]
Length = 345
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 192/400 (48%), Gaps = 85/400 (21%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTA 70
+RVLE +SGIGGM Y+ A + ++V A D+N AN VY N+G + NIQ+L+
Sbjct: 2 VFRVLELFSGIGGMHYAFKYAQLDGEIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLSV 61
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
E+ A+ L+SPPCQP+TRQGLQ+ + D R+ + + LIP ++L +ENV
Sbjct: 62 KEVTKLQANMLLMSPPCQPHTRQGLQRDTEDKRSDALTHLCGLIPECQNLQYIL-MENVK 120
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 190
GFE+S + IE L S + +EFIL+P QF VP +R RY+C+A RK F
Sbjct: 121 GFESSQARNQFIESLERSGFHWREFILTPTQFNVPNTRYRYYCIA-RKGADF-------- 171
Query: 191 LLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 250
P G D W+++ G ++
Sbjct: 172 ------PFAG-------------DKIWEEM-----------------------PGAIAQN 189
Query: 251 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 310
A EE V D FLVP ++ + MDI++P R CFTK Y Y
Sbjct: 190 QALSQIAEIVEENVSAD-------FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYT 242
Query: 311 KGTGS---------------LLATVQPKNKGKASS----------LKEQHLRYFTPREVA 345
+GTGS L+ + NK S L + LRYFTPREVA
Sbjct: 243 EGTGSAYTPLSEDESHRIFELVKEIDTSNKDAPKSEKILQQRLDLLHQVKLRYFTPREVA 302
Query: 346 NLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
L SFP DF+FP + RQ+Y LLGNS+++ VV L++ L
Sbjct: 303 RLMSFPEDFEFPPETTNRQKYRLLGNSINVKVVGELIKLL 342
>gi|281338132|gb|EFB13716.1| hypothetical protein PANDA_007177 [Ailuropoda melanoleuca]
Length = 372
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 137/375 (36%), Positives = 201/375 (53%), Gaps = 31/375 (8%)
Query: 34 VSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTR 92
V A VV A D+N AN+VY+ NF H + I+ +T E D + L+SPPCQP+TR
Sbjct: 6 VPAHVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDKLSFNTILMSPPCQPFTR 65
Query: 93 QGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLT 152
GLQ +D R S L IL+++P K P + +ENV GFE S +I+ L N +
Sbjct: 66 IGLQGDVTDPRTNSLLYILDILPRLQKLPKYILLENVKGFEVSSARDLLIQTLENCGFQY 125
Query: 153 QEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ---LLNNQLLRSPSPLLGNDD--MT 205
QEF+LSP G+P SR RYF +AK +PL F+ L+ + S P D
Sbjct: 126 QEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQVPGQVLMEFPKIESEHPERNTIDGENK 185
Query: 206 VITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLS-TGTAAVDDFGAAEETV 264
+ + +P+ +DK C E L + ++++ + S + DF E+ V
Sbjct: 186 IEREKIEPNICFDK-SRQCSGKEAILFKLETVEEIDRKLHQDSDLSVQMLKDF--LEDDV 242
Query: 265 EVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQP-- 322
+V++ +FL P SL+ R+ +DIV P +R CFTK Y Y++GTGS+L T +
Sbjct: 243 DVNQ-----YFLPPKSLL-RYALLLDIVKPTCRRSTCFTKGYGSYIEGTGSVLQTTEDVQ 296
Query: 323 -----------KNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGN 371
+ K + L LRYFTP+E+ANL FP +F FP ++++QRY LLGN
Sbjct: 297 IEDIYKSLTNLSQEEKIAKLLMLKLRYFTPKEIANLLGFPSEFGFPEKITVKQRYRLLGN 356
Query: 372 SLSIAVVAPLLQYLF 386
SL++ VVA L++ L+
Sbjct: 357 SLNVRVVAKLIKILY 371
>gi|213403582|ref|XP_002172563.1| tRNA (cytosine-5-)-methyltransferase [Schizosaccharomyces japonicus
yFS275]
gi|212000610|gb|EEB06270.1| tRNA (cytosine-5-)-methyltransferase [Schizosaccharomyces japonicus
yFS275]
Length = 326
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/376 (34%), Positives = 187/376 (49%), Gaps = 63/376 (16%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
RVLE YSGIGGM ++L K ++ +VV A DIN AN +Y NFG +I LT +L
Sbjct: 9 RVLELYSGIGGMHFALQKLNIDFKVVLAVDINPLANQIYNENFGKIAKHYDISTLTKEQL 68
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
D W LSP CQPYTR G Q+ +D RA +FL +LE++P P +F+ENV GFE
Sbjct: 69 DALRCDLWTLSPSCQPYTRLGKQQGHADPRAAAFLHVLEILPTCSYKPKFIFIENVFGFE 128
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLR 193
TS T K E+L S Y+ E +LSP Q G+P SR R++ LA+
Sbjct: 129 TSWTAEKCREVLKASGYVFHEVLLSPFQIGIPNSRLRWYGLAR----------------- 171
Query: 194 SPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAA 253
K D+ ++SW+ L D E +N
Sbjct: 172 --------------LKRDEIENSWNPKLSFPDKAETIRPINNY----------------- 200
Query: 254 VDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGT 313
+D+ V+++ VP+ +++++G +DIV P CCFT+ Y V+G+
Sbjct: 201 ------------LDKEVNMEKHSVPVDILQKYGHQLDIVKPSDTHSCCFTRGYTHLVQGS 248
Query: 314 GSLLATVQPKNKGKA--SSLKEQHLRYFTPREVANLHSFPGDFQF-PHHLSLRQRYALLG 370
GS+L ++ KA + + LRYFT RE+A + FP +F + S + Y LLG
Sbjct: 249 GSVLQMSDHEDIKKAFLENRYDLCLRYFTVREIARIMGFPEEFTWQASGASDKAMYRLLG 308
Query: 371 NSLSIAVVAPLLQYLF 386
NS++I VV+ L + L
Sbjct: 309 NSINIHVVSALQKELL 324
>gi|126341517|ref|XP_001377353.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Monodelphis
domestica]
Length = 384
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 208/391 (53%), Gaps = 59/391 (15%)
Query: 34 VSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTR 92
VSA+VV A D+N AN+VY+ NF H + + I+ +T E + + L+SPPCQP+TR
Sbjct: 16 VSAEVVAAVDVNTIANEVYKHNFPHTQLWAKTIEGITLKEFNQLSFNMILMSPPCQPFTR 75
Query: 93 QGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLT 152
GLQ +D R SFL IL ++P K P + +ENV GFE S T ++ L N +
Sbjct: 76 IGLQGDVTDPRTKSFLHILHVLPKLQKLPTYILLENVKGFEVSSTRDLFVQTLENCGFKY 135
Query: 153 QEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQLLNNQLL-----------RSPSPL- 198
QEF+LSP+ G+P SR RYF +AK +PL F Q+L L+ + P+ L
Sbjct: 136 QEFLLSPISLGIPNSRLRYFLIAKLQSEPLPF--QVLGQVLVEIPTADSANSQKQPATLD 193
Query: 199 LGNDDMTVITKHDQPD---------DSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249
LG ++ T+ + P +++ LE+ + +ER L+ +S V FL
Sbjct: 194 LGENNEGRKTEPNPPQAGDTQCSGKETFLFKLETAEEIERKLQ-QDSDLSVQMLKDFLE- 251
Query: 250 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 309
DD ++ +FL P +L+ R+ +DIV P +R CFTK Y Y
Sbjct: 252 -----DDSDMSQ------------YFLPPKALL-RYALLLDIVQPTCRRSTCFTKGYGSY 293
Query: 310 VKGTGSLLATVQP-------------KNKGKASSLKEQHLRYFTPREVANLHSFPGDFQF 356
++GTGS+L T + + K + L + LRYFTPRE+ANL FP +F+F
Sbjct: 294 IEGTGSVLQTAEDIQIEDAYASLDTLSEEEKLTRLSQLKLRYFTPREIANLLGFPPEFEF 353
Query: 357 PHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
P ++++Q Y LLGNSL++ +V+ L++ L
Sbjct: 354 PEKITVKQCYRLLGNSLNVHIVSKLIRILLG 384
>gi|426364086|ref|XP_004049153.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Gorilla
gorilla gorilla]
Length = 374
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 212/399 (53%), Gaps = 50/399 (12%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF + + I+ +T
Sbjct: 2 EPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPNTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D L+SPPCQP+TR G Q +D+R SFL IL+++P K P + +ENV
Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ-- 185
GFE S T I+ N G+P SR RYF +AK +PL F+
Sbjct: 122 KGFEVSSTS---IDFTNN--------------LGIPNSRLRYFLIAKLQSEPLPFQAPGQ 164
Query: 186 -LLNNQLLRS--PSPLLGNDDMTVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQV 240
L+ + S P + + + K+ +P+ S+D ++ D + LE + +
Sbjct: 165 VLMEFPKIESVHPQKYAMDVENKIQEKNIEPNISFDGSIQCSGKDAILFKLETAEEIHRK 224
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
N + LS + DF ++ ++ +L+P + R+ +DIV P +R
Sbjct: 225 NQQDSDLS--VKMLKDF--------LEDDTDMNQYLLPPKSLLRYALLLDIVQPTCRRSV 274
Query: 301 CFTKSYYRYVKGTGSLLAT---VQPKNKGKA----------SSLKEQHLRYFTPREVANL 347
CFTK Y Y++GTGS+L T VQ +N K+ + L LRYFTP+E+ANL
Sbjct: 275 CFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLSMLKLRYFTPKEIANL 334
Query: 348 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
FP +F FP ++++QRY LLGNSL++ VVA L++ L+
Sbjct: 335 LGFPPEFGFPKKITVKQRYRLLGNSLNVHVVAKLIKILY 373
>gi|380021060|ref|XP_003694392.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Apis
florea]
Length = 359
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 200/388 (51%), Gaps = 59/388 (15%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAE 72
RVLE YSGIGGM Y+L ++ + +V A DIN AN +Y+ NF + NIQ+L+A E
Sbjct: 2 RVLELYSGIGGMHYALQESGIKGDIVAAVDINTVANSIYKYNFPNVLLLNCNIQSLSAQE 61
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
++ L+SPPCQPYTR GL+K D R+ S L +L LIP +K + +ENV GF
Sbjct: 62 INNLNIDTILMSPPCQPYTRIGLRKDILDNRSSSLLHVLSLIPQ-IKTLKYILLENVKGF 120
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC---QLLNN 189
E S+ +++ + S + +E ILSP QFG+P +R RY+ LAK+K L F C +LN
Sbjct: 121 EKSEMRNAVLKCINTSGFNYKELILSPCQFGIPNTRYRYYLLAKKKNLEF-CFDQSVLNF 179
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249
+L S +L ++ + DS K ++C +E LE
Sbjct: 180 ELSDSILKILPKSKYNLLAEKSYNQDS--KTDKNCYTLENILEH---------------- 221
Query: 250 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 309
V +L+P L+E+ MDI S CCFTK+Y Y
Sbjct: 222 --------------------VEGSQYLIPKKLLEKRVWLMDIRTSQSNGSCCFTKAYSHY 261
Query: 310 VKGTGSLLATVQPKNKGKASS---------------LKEQHLRYFTPREVANLHSFPGDF 354
V+GTGS+ K +A S L++ LRYFTPRE+ L FP +F
Sbjct: 262 VEGTGSVYCPYSEKTIKEAFSEANKYERQSLEVSKILEKLMLRYFTPREICRLMCFPEEF 321
Query: 355 QFPHHLSLRQRYALLGNSLSIAVVAPLL 382
FP +++ +Q+Y LLGNS++I VV+ L+
Sbjct: 322 TFPEYITDKQKYRLLGNSINIYVVSRLI 349
>gi|119606624|gb|EAW86218.1| hCG23994, isoform CRA_b [Homo sapiens]
gi|167887560|gb|ACA05984.1| tRNA aspartic acid methyltransferase 1 variant 2 [Homo sapiens]
Length = 367
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 211/399 (52%), Gaps = 57/399 (14%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 EPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D L+SPPCQP+TR LQK P + +ENV
Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTR--LQKL----------------------PKYILLENV 97
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ-- 185
GFE S T +I+ + N + QEF+LSP G+P SR RYF +AK +PL F+
Sbjct: 98 KGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQ 157
Query: 186 -LLNNQLLRSPSPLLGNDDM--TVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQV 240
L+ + S P D+ + K+ +P+ S+D ++ D + LE + +
Sbjct: 158 VLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRK 217
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
N + LS + DF ++ ++ +L+P + R+ +DIV P +R
Sbjct: 218 NQQDSDLSV--KMLKDF--------LEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSV 267
Query: 301 CFTKSYYRYVKGTGSLLAT---VQPKNKGKAS---SLKEQ-------HLRYFTPREVANL 347
CFTK Y Y++GTGS+L T VQ +N K+ S +EQ LRYFTP+E+ANL
Sbjct: 268 CFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANL 327
Query: 348 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
FP +F FP ++++QRY LLGNSL++ VVA L++ L+
Sbjct: 328 LGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILY 366
>gi|291402254|ref|XP_002717405.1| PREDICTED: tRNA aspartic acid methyltransferase 1 [Oryctolagus
cuniculus]
Length = 367
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 211/398 (53%), Gaps = 57/398 (14%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLT 69
E RVLE YSGIGGM ++L ++ V AQVV A D+N AN+VYE NF H I+ +T
Sbjct: 2 EPLRVLELYSGIGGMHHALKESCVPAQVVAAIDVNTVANEVYEYNFPHTLLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D + L+SPPCQP+TR LQK P + +ENV
Sbjct: 62 LEEFDKLSFNMILMSPPCQPFTR--LQKL----------------------PKYILLENV 97
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK--PLSFRCQ-- 185
GFE S T +I+ + N + QEF+LSP G+P +R RYF +AKR+ PL F+
Sbjct: 98 KGFEVSSTRDLLIQTMENCGFQYQEFLLSPTSLGIPNARLRYFLVAKRQSEPLPFQAPGQ 157
Query: 186 -LLNNQLLRSPSPLLGNDDMTVIT--KHDQPDDSWDKLLESC--DPVERFLEFSNSGDQV 240
L+ ++S P D + K QP+ +D + D V LE + ++
Sbjct: 158 VLMEFPKIQSEYPQKYAIDTKQKSEEKEIQPNICFDGSTQCSGKDTVLFKLETAEEIERK 217
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
+ +S + DF E+ +++++ +FL P SL+ R+ +DIV P +R
Sbjct: 218 RQQDNDIS--VQMLKDF--LEDDIDMNQ-----YFLPPKSLL-RYALLLDIVRPTCRRST 267
Query: 301 CFTKSYYRYVKGTGSLLAT---VQPKN----------KGKASSLKEQHLRYFTPREVANL 347
CFTK Y Y++GTGS+L T VQ +N + K ++L LRYFTPRE+ANL
Sbjct: 268 CFTKGYGSYIEGTGSVLQTTEDVQIENIYKSLPNLPQEEKITALSMLKLRYFTPREIANL 327
Query: 348 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
FP +F FP ++L+Q Y LLGNSL++ VV+ L++ L
Sbjct: 328 LGFPPEFGFPEKITLKQCYRLLGNSLNVHVVSKLIKML 365
>gi|321476287|gb|EFX87248.1| hypothetical protein DAPPUDRAFT_187425 [Daphnia pulex]
Length = 341
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 135/391 (34%), Positives = 195/391 (49%), Gaps = 63/391 (16%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQN 67
+ + R+LE YSGIGGM Y+ A+V A+VV + DIN AN VY NF Q NI++
Sbjct: 2 EKKQMRILELYSGIGGMHYAAELANVGAEVVFSVDINTSANAVYRHNFKQTNQQARNIES 61
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
L+A E++ ++SPPCQP+TR GL+ D+R SFL +L+++PH ++ + +E
Sbjct: 62 LSAKEINKLRPDIIMMSPPCQPFTRVGLKLDVEDSRCSSFLHLLDILPH-LETVSFILME 120
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR-KPLSFRCQL 186
NVVGFETS+ + L N D+ +EFILSP +P SR RY+ +AK+ SF +
Sbjct: 121 NVVGFETSEMRNAFTKALKNCDFHFREFILSPESIKIPNSRSRYYLVAKKCTDFSFGSE- 179
Query: 187 LNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 246
N+ + P+ L + +M V K + DP
Sbjct: 180 -NDIMTSFPNSRLCDIEMPVQEK-------------TLDPY------------------- 206
Query: 247 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 306
V D E + +L+ + ++ +D+ CCFTK+Y
Sbjct: 207 ------LVKDMSDEE----------LARYLLTDKTLFKYWRILDVRQTSDTSSCCFTKAY 250
Query: 307 YRYVKGTGSLLAT----------VQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQF 356
Y +GTGS+L + K + LK LRYFTPREV NL FP +F F
Sbjct: 251 THYAEGTGSVLQHDPNEPFHQKFAEFKEDEDIAHLKPLKLRYFTPREVGNLMGFPAEFTF 310
Query: 357 PHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
P + SL+ RY LLGNSL++ VV+ LL+ L
Sbjct: 311 PENTSLKTRYRLLGNSLNVLVVSNLLRILLG 341
>gi|340725061|ref|XP_003400893.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Bombus
terrestris]
Length = 354
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 144/394 (36%), Positives = 206/394 (52%), Gaps = 64/394 (16%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAAE 72
RVLE YSGIGGM Y+L ++ ++ VV A DIN AN +Y NF + NIQ+L+A
Sbjct: 2 RVLELYSGIGGMHYALQESGINGDVVAAVDINTVANSIYRYNFPNVLLMNCNIQSLSAKL 61
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
++ L+SPPCQPYTR GLQ+ SD R+ S L +L LIP H+L +ENV GF
Sbjct: 62 INDLNIDTILMSPPCQPYTRVGLQRDISDNRSSSLLHVLSLIPQLRTLKHIL-LENVKGF 120
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF---RCQLLNN 189
E S+ +++ + S + +E ILSP QFG+P +R RY+ LAKRK F C +LN
Sbjct: 121 ENSEMRNAVLKCMNMSGFNYKELILSPCQFGIPNTRYRYYLLAKRKDSEFCFDHC-ILNF 179
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249
L + L ++ + + D ++C +E LE
Sbjct: 180 NLPEAVLKALPGSKHNLLLEGAKTD-------KNCYKLENILE----------------- 215
Query: 250 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 309
VD+ +L+P L+++ DI S CCFTK+Y Y
Sbjct: 216 ---------------NVDK----SQYLIPRKLLQKRAWLFDIRTSQSDGSCCFTKAYSHY 256
Query: 310 VKGTGSLLA-----TVQ----PKNK-GKAS-----SLKEQHLRYFTPREVANLHSFPGDF 354
+GTGS+ + T+Q NK GK S L++ LRYFTPREV+ L FP +F
Sbjct: 257 AEGTGSVYSPYTEETIQQIFLEANKYGKQSLEASEVLQKLMLRYFTPREVSRLMCFPEEF 316
Query: 355 QFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
+FP H++ +QRY LLGNS+++ VV+ L+ L+ +
Sbjct: 317 KFPEHITCKQRYRLLGNSINVYVVSRLIFLLYTE 350
>gi|61554791|gb|AAX46615.1| DNA methyltransferase 2 isoform a [Bos taurus]
Length = 377
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 192/378 (50%), Gaps = 55/378 (14%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E R LE YSGIGGM +L ++ + AQVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 EPLRALELYSGIGGMHQALRESCIPAQVVAAVDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D + L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV
Sbjct: 62 LEEFDRLSFNMILMSPPCQPFTRIGLQGDVTDPRTNSFLHILDILPRLQKLPKYILLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 189
GFE S T +I+ + N + QEF+LSP G+P SR RYF +AK +P F Q
Sbjct: 122 KGFEMSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQPEPFPFQAPGQ 181
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249
L+ P T+ + P E+ E +G ++ ++ +
Sbjct: 182 VLMEFPK-----------TESEHPPKYAIN-------AEKKTEEKKTGPKICFDSSTQCS 223
Query: 250 GTAAVDDFGAAEETVEVDRCVSIDH--------------------FLVPLSLIERWGSAM 289
G A+ E E+DR D FL P SL+ R+ +
Sbjct: 224 GKEAI--LFKLETAGEIDRKHQQDSDLSVRMLKDFLEDDIDKHSFFLPPKSLL-RYALLL 280
Query: 290 DIVYPDSKRCCCFTKSYYRYVKGTGSLLAT---VQPKNKGKA-SSLKEQ---------HL 336
DIV P S+R CFTK Y RY++GTGS+L T VQ +N K+ +SL ++ L
Sbjct: 281 DIVKPTSRRSMCFTKGYGRYIEGTGSVLQTTEDVQIENIYKSLTSLSQEEKIMRLSMLQL 340
Query: 337 RYFTPREVANLHSFPGDF 354
R+FTP+E+ANL FP +F
Sbjct: 341 RFFTPKEIANLLGFPPEF 358
>gi|19112479|ref|NP_595687.1| DNA methyltransferase [Schizosaccharomyces pombe 972h-]
gi|730347|sp|P40999.1|PMT1M_SCHPO RecName: Full=tRNA (cytosine(38)-C(5))-methyltransferase; AltName:
Full=DNA (cytosine-5)-methyltransferase-like protein 2;
Short=Dnmt2; AltName: Full=M.SpomI; AltName:
Full=SpIM.SpoI
gi|563911|emb|CAA57824.1| methyltransferase [Schizosaccharomyces pombe]
gi|5689984|emb|CAB52029.1| DNA methyltransferase homolog [Schizosaccharomyces pombe]
Length = 330
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 130/376 (34%), Positives = 186/376 (49%), Gaps = 61/376 (16%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
RVLE YSGIGGM Y+L A++ A +V A DIN +AN++Y LN G +I LTA +
Sbjct: 8 RVLELYSGIGGMHYALNLANIPADIVCAIDINPQANEIYNLNHGKLAKHMDISTLTAKDF 67
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
D + W +SP CQP+TR G +K D R+ +FL IL ++PH P + +ENV GFE
Sbjct: 68 DAFDCKLWTMSPSCQPFTRIGNRKDILDPRSQAFLNILNVLPHVNNLPEYILIENVQGFE 127
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLR 193
S + ++L N Y E ILSP QF +P SR R++ LA+ L+F+ +
Sbjct: 128 ESKAAEECRKVLRNCGYNLIEGILSPNQFNIPNSRSRWYGLAR---LNFKGE-------- 176
Query: 194 SPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAA 253
W S D V +F E + +V +L
Sbjct: 177 -----------------------W-----SIDDVFQFSEVAQKEGEVKRIRDYL------ 202
Query: 254 VDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGT 313
E++R S ++V S++ +WG DIV PDS CCCFT+ Y V+G
Sbjct: 203 -----------EIERDWS--SYMVLESVLNKWGHQFDIVKPDSSSCCCFTRGYTHLVQGA 249
Query: 314 GSLLATVQPKNKGKASSLKEQ--HLRYFTPREVANLHSFPGDFQFPH-HLSLRQRYALLG 370
GS+L +N + LRYFT REVA L FP ++ +++ + Y LLG
Sbjct: 250 GSILQMSDHENTHEQFERNRMALQLRYFTAREVARLMGFPESLEWSKSNVTEKCMYRLLG 309
Query: 371 NSLSIAVVAPLLQYLF 386
NS+++ VV+ L+ L
Sbjct: 310 NSINVKVVSYLISLLL 325
>gi|449275603|gb|EMC84405.1| tRNA (cytosine-5-)-methyltransferase, partial [Columba livia]
Length = 376
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 143/383 (37%), Positives = 191/383 (49%), Gaps = 41/383 (10%)
Query: 35 SAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQ 93
SA+VV A D+N AN+VY+ NF P + I+ +T E D L+SPPCQP+TR
Sbjct: 5 SAEVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGITLKEFDRLSFDMILMSPPCQPFTRI 64
Query: 94 GLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQ 153
GLQ SD R SFL IL+++P K P L +ENV GFE S +++ L + Q
Sbjct: 65 GLQGDVSDPRTKSFLYILDILPRLQKLPKYLLLENVKGFECSSARNELLRTLETCGFKYQ 124
Query: 154 EFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL---------GNDDM 204
EF+LSP G+P SR RYF +AK F Q L R P L G D
Sbjct: 125 EFLLSPTCLGIPNSRLRYFLIAKLHQEPFPFQAPGQILPRFPDQDLEDLFENKAAGKDSS 184
Query: 205 TVITKHDQ------PDDSWDKLLESCDPVERFL-EFSNSGDQVNTETGFLSTGTAAVDDF 257
++ ++ PD S K L P FL + + T + + DF
Sbjct: 185 SLSSEEKNLDPNIGPDCSSKKSL----PKGTFLFKLETVEEMERKHTQDNDSSIQMLKDF 240
Query: 258 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 317
EE E+ + +FL P SL+ R+ +DIV P +R CFTK Y YV+GTGS+L
Sbjct: 241 -LEEENEEMSQ-----YFLPPKSLL-RYAFLLDIVKPTCRRSTCFTKGYGHYVEGTGSVL 293
Query: 318 ATV-------------QPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQ 364
T + + K L LRYFTPRE+ANLH FP +F FP ++++Q
Sbjct: 294 QTAVDVQLESVFKCIEELPEEEKLMKLSTLKLRYFTPREIANLHGFPLEFGFPDKVTIKQ 353
Query: 365 RYALLGNSLSIAVVAPLLQYLFA 387
Y LLGNSL++ VVA L+ L
Sbjct: 354 CYRLLGNSLNVHVVAKLISILLG 376
>gi|350398300|ref|XP_003485152.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Bombus
impatiens]
Length = 354
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 143/394 (36%), Positives = 204/394 (51%), Gaps = 64/394 (16%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAAE 72
RVLE YSGIGGM Y+L ++ ++ VV A DIN AN +Y NF + NIQ+L+A
Sbjct: 2 RVLELYSGIGGMHYALQESGINGDVVAAVDINTVANSIYRYNFPNVLLMNCNIQSLSAKL 61
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
++ L+SPPCQPYTR GLQ+ SD R+ S L +L LIP H+L +ENV GF
Sbjct: 62 INDLNIDTILMSPPCQPYTRVGLQRDISDNRSSSLLHVLSLIPQLRTLKHIL-LENVKGF 120
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF---RCQLLNN 189
E S+ +++ + S + +E ILSP QFG+P +R RY+ LAKRK F C +LN
Sbjct: 121 EKSEMRNAVLKCMNMSGFNYKELILSPCQFGIPNTRYRYYLLAKRKDSEFCFDHC-ILNF 179
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249
L + L ++ + + D + C +E LE N E
Sbjct: 180 NLPEAVLKALPRSKHNLLLEGAKTD-------KKCYKLENILE--------NVEKS---- 220
Query: 250 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 309
+L+P L+++ DI S CCFTK+Y Y
Sbjct: 221 ------------------------QYLIPRKLLQKRAWLFDIRTSQSDGSCCFTKAYSHY 256
Query: 310 VKGTGSLLA-----TVQ----PKNK-GKAS-----SLKEQHLRYFTPREVANLHSFPGDF 354
+GTGS+ + T+Q NK GK S L++ LRYFTP+EV+ L FP +F
Sbjct: 257 AEGTGSVYSPYTEETIQQIFLEANKYGKQSLEASEVLQKLMLRYFTPKEVSRLMCFPEEF 316
Query: 355 QFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
+FP H++ +QRY LLGNS+++ VV+ L+ L+ +
Sbjct: 317 KFPEHITCKQRYRLLGNSINVYVVSRLIFLLYTE 350
>gi|328769954|gb|EGF79997.1| hypothetical protein BATDEDRAFT_35320 [Batrachochytrium
dendrobatidis JAM81]
Length = 621
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 189/389 (48%), Gaps = 71/389 (18%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
R LEF+SGIGGM + L A + A+VV AFDIN +AN Y NFG P + +IQ+L EL
Sbjct: 6 RALEFFSGIGGMHFGLEWAAIDAKVVAAFDINPQANACYNHNFGLEPVEKSIQDLNPKEL 65
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
+ Y A+ WL+SPPCQPYTR G Q DARA FL +L+ + PP +F+ENV FE
Sbjct: 66 ERYDANCWLMSPPCQPYTRTGKQLDDKDARAQGFLFLLDTLSQMASPPMYIFIENVANFE 125
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLR 193
S T K+I+IL+ DY+ QE++L+P+QFG+P RPRY+ A+++
Sbjct: 126 QSRTRQKLIDILSKLDYIYQEWLLNPVQFGIPNDRPRYYLTARKQ--------------- 170
Query: 194 SPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAA 253
D T+ QP+ + +L S F+ GT
Sbjct: 171 --------DRTTLPDSLLQPNLFYGRLSRSWMFEPPFV-----------------VGTLT 205
Query: 254 VDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGS--AMDIVYPDSKRCCCFTKSYYRYVK 311
V +F ++ D + F +P L+ GS + I P R CFTK+Y +
Sbjct: 206 VGEF------LQNDILCNDPVFKIPERLLRSRGSFDPLVIAKPSHTRTSCFTKAYGHHGV 259
Query: 312 GTGSLLATV-----QPKNKGKASSLKEQHLRYFTPREVANLHSFPGD------------- 353
+G+ L T + ++ + LR FT E+A LH FP D
Sbjct: 260 ASGAFLQTRGFDQDESVLLNTHEAVDKLGLRLFTSIEIARLHGFPIDLKAPQSPHINLSG 319
Query: 354 -----FQFPHHLSLRQRYALLGNSLSIAV 377
F FP +S RQ++ +LGNS+ + V
Sbjct: 320 THLHLFSFPKDISTRQQWRVLGNSMCVIV 348
>gi|49523271|gb|AAH75465.1| MGC89267 protein [Xenopus (Silurana) tropicalis]
Length = 379
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 135/369 (36%), Positives = 191/369 (51%), Gaps = 40/369 (10%)
Query: 45 NDKANDVYELNFGHRP-YQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDAR 103
N AN+VY+ NF + P + +I+ L+ ELD L+SPPCQP+TR GLQ SD R
Sbjct: 21 NTIANEVYKYNFPYTPLWPKSIEGLSLKELDALSFDMILMSPPCQPFTRIGLQGDISDPR 80
Query: 104 AFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFG 163
SFL +L+++P K P + +ENV GFETS+ +I L Y QEF+LSP G
Sbjct: 81 TKSFLYVLDVLPRLKKQPAYILLENVKGFETSEAREALIRTLEKGGYAYQEFLLSPTCLG 140
Query: 164 VPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLES 223
+P SR RYF +AK + F + L PS G+ + ++ + P ++ S
Sbjct: 141 IPNSRLRYFLIAKLQKEPFAFPTTSKILEEFPSQCPGSKRIFHCSESN-PQAGVEQKYSS 199
Query: 224 -------CDPVERFL-EFSNSGDQVNTETGFLSTGTAAVDDF--GAAEETVEVDRCVSID 273
CDP + L + + + +T + + DF G EE +
Sbjct: 200 CPLSGTDCDPEKTVLYKLETAVELQRKQTQDNDSSVRMLQDFLEGNVEEMSQ-------- 251
Query: 274 HFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT-------------- 319
+FL P SL+ R+ +DIV P +R CFTK Y YV+GTGS+L T
Sbjct: 252 YFLPPKSLL-RYALILDIVKPTCRRSTCFTKGYGHYVEGTGSVLQTATDVEIDTVYKSLD 310
Query: 320 --VQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAV 377
+ + K SSLK +RYFTPRE+ANLH FP F FP ++ +QRY LLGNSL++ +
Sbjct: 311 LLTEEEKLAKLSSLK---MRYFTPREIANLHGFPATFGFPEEVTKKQRYRLLGNSLNVHI 367
Query: 378 VAPLLQYLF 386
V+ L+ L
Sbjct: 368 VSCLISTLL 376
>gi|432099759|gb|ELK28794.1| tRNA (cytosine(38)-C(5))-methyltransferase [Myotis davidii]
Length = 502
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 136/390 (34%), Positives = 207/390 (53%), Gaps = 43/390 (11%)
Query: 31 KADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSPPCQP 89
K+ + A VV A D+ND AN+VY+ NF + I+ ++ E D + L+SPPCQP
Sbjct: 123 KSGIPAHVVAAIDVNDVANEVYKYNFPETQLLAKTIEGISLEEFDRLSFNMILMSPPCQP 182
Query: 90 YTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSD 149
+TR GLQ +D R SFL IL+++P P + +ENV GFE S +I+ + N
Sbjct: 183 FTRIGLQGDVTDPRTNSFLYILDILPRLQTLPKYILLENVKGFEVSSARDLLIKTIENCG 242
Query: 150 YLTQEFILSP----------LQFGVPYSRPRYFCLAK--RKPLSFRCQ---LLNNQLLRS 194
+ QEF+LSP Q G+P SR RYF +AK +PL F+ L+ + S
Sbjct: 243 FQYQEFLLSPTSVVDRDLFYFQLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKMES 302
Query: 195 PSPLLGNDDMT--VITKHDQPDDSWD--KLLESCDPVERFLEFSNSGDQVNTETGFLSTG 250
P D + K +P+ +D + +P+ LE + ++ + + LS
Sbjct: 303 EHPQQHAIDAVNKIEGKKIEPNICFDSSRQCSGKEPILFKLETAEEIERKHQQDSDLS-- 360
Query: 251 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 310
+ DF E+ ++ ++ +FL P SL+ R+ +DIV P +R CFTK Y RY+
Sbjct: 361 VQMLKDF--LEDDIDTNQ-----YFLPPKSLL-RYALLLDIVTPTCRRSMCFTKGYGRYI 412
Query: 311 KGTGSLLATVQP-------------KNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFP 357
+GTGS+L T + + K + L LRYFTP+E+ANL FP +F FP
Sbjct: 413 EGTGSVLQTAEDVQIEDIYKSLTDLSQEEKITKLLMLKLRYFTPKEIANLLGFPPEFGFP 472
Query: 358 HHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
+++++QRY LLGNSL++ VVA L++ L+
Sbjct: 473 ENITVKQRYRLLGNSLNVHVVAKLIKVLYG 502
>gi|345487046|ref|XP_001602026.2| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like, partial
[Nasonia vitripennis]
Length = 347
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 199/376 (52%), Gaps = 54/376 (14%)
Query: 28 SLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLTAAELDMYGAHAWLLSPP 86
+L ++ V+ +++ + DIN AN VY NF NI+++T E+ L+SPP
Sbjct: 1 ALQESSVTGKIITSIDINTTANKVYRHNFPETANISRNIESVTVEEIAKLHIDCILMSPP 60
Query: 87 CQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILA 146
CQP+TR GL+K S D R S L IL++IPH ++ + +ENV GFE+S ++I L
Sbjct: 61 CQPFTRIGLKKDSDDNRCLSLLHILQIIPH-IESLDYILLENVKGFESSQARNEVILCLE 119
Query: 147 NSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTV 206
S + +E ILSP QFG+P SR RY+ +AKRK L F DD ++
Sbjct: 120 KSGFNYKELILSPCQFGIPNSRHRYYLIAKRKGLKFIF-----------------DDASL 162
Query: 207 ITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGT-AAVDDFGAAEETVE 265
IT P+ + L P R+ L GT +++ G +
Sbjct: 163 IT--SIPEKVLELL-----PKNRYTSVP------------LEDGTHSSIKSKGKCFKLKY 203
Query: 266 VDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLA-----TV 320
+ +++FL+P ++ + GS +DI P+S CCFTK+Y YV+GTGS+ + +
Sbjct: 204 ILESNVVENFLIPGKILLKRGSLLDIRTPESSGSCCFTKAYSHYVEGTGSVFSPSPDFEI 263
Query: 321 QPK----NKG------KASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLG 370
+ K NK K +L LRYFTP+EV+ L FP +F+FP+ LS +Q+Y LLG
Sbjct: 264 KKKFEEINKSSETPEDKMQALLGLKLRYFTPKEVSRLMCFPENFEFPNDLSNKQKYRLLG 323
Query: 371 NSLSIAVVAPLLQYLF 386
NS+++ VV+ L+ L+
Sbjct: 324 NSINVHVVSQLIYLLY 339
>gi|144952808|gb|ABP04058.1| DNA methyltransferase 2 [Macrobrachium rosenbergii]
Length = 396
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 207/391 (52%), Gaps = 21/391 (5%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ R+LE YSGIGGMR + ++ + +V +++IN A +VY+ NF P NI LT
Sbjct: 8 QPLRILELYSGIGGMRVAAKESGLQFDIVGSYEINTTALEVYQHNFPKTPKAYNIMGLTL 67
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
L+ ++SPPCQP+TRQGL++ D R S L ++ L+ PP M+ +ENV
Sbjct: 68 DHLESLSPDVIMMSPPCQPFTRQGLKRDVEDTRTSSLLHLISLLEKLSHPPKMILLENVA 127
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 190
GFE S +++E+L + +Y+ QEF+LSP +FG+P SR RY+ LAK++ F C ++N+
Sbjct: 128 GFEKSLAREQLMEMLRSKNYVWQEFLLSPTEFGIPNSRLRYYLLAKQQLYPF-CLDVSNE 186
Query: 191 LLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESC-DPVERFLEFSNSGDQVNTETGFLST 249
+ + L I PD ++ +C PV L+ N
Sbjct: 187 IKEELTACLCIRRERDIQAPVLPDAR--EICANCGKPVINSLQNLLRDFHGNINNELHQP 244
Query: 250 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 309
+ D + +E D ++++ +L+ ++ ++ +DIV +SKR CCFTK Y Y
Sbjct: 245 RKSYSDLSLSLSSFMESD--INVEPYLLKDKVLSKYCMILDIVDRESKRSCCFTKGYGHY 302
Query: 310 VKGTGSL---------------LATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDF 354
V+GTGS+ L+ ++ + + LK+ RYFT E+ L FP F
Sbjct: 303 VEGTGSVIKGNSDLDVDEVYNKLSRLELGDPKRLDLLKQLKFRYFTASEILRLMCFPKWF 362
Query: 355 QFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
FP L+++Q+Y +LGNS++I VV LL L
Sbjct: 363 SFPPSLTMKQKYRVLGNSINILVVTSLLLIL 393
>gi|111185513|gb|AAH46854.2| MGC53207 protein [Xenopus laevis]
Length = 382
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 135/361 (37%), Positives = 186/361 (51%), Gaps = 37/361 (10%)
Query: 45 NDKANDVYELNFGHRP-YQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDAR 103
N AN VY+ NF H P + I+ +T ELD L+SPPCQP+TR GLQ SD R
Sbjct: 21 NTNANKVYKYNFPHTPLWPKTIEGITLKELDALSFDMILMSPPCQPFTRIGLQGDISDPR 80
Query: 104 AFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFG 163
A SFL +L+++P K P + +ENV GFE+S+ +I L Y+ QEF+LSP G
Sbjct: 81 AKSFLYVLDILPRLKKLPAYILLENVKGFESSEAREALIGTLQKCGYVYQEFLLSPTCLG 140
Query: 164 VPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPS--PLLGNDDMTVITKHDQPDDSWDKLL 221
+P SR RYF +AK + F + N L PS + + + P D+
Sbjct: 141 IPNSRLRYFLIAKLQTEPFAFPISNTILEEFPSQHSIDPGRRRVIHCSENNPQAGADQKN 200
Query: 222 ESC-------DPVERFLEFSNSGDQVNTETGFLSTGTA-AVDDFGAAEETVEVDRCVSID 273
SC P + FL + ++ + G + + + DF E +VE
Sbjct: 201 PSCPFSGTDHGPEKTFLYKLETAQELERKQGQDNDASVRMLQDF--LETSVEEMS----Q 254
Query: 274 HFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATV------------- 320
+FL P SL+ R+ +DIV P +R CFTK Y YV+GTGS+L T
Sbjct: 255 YFLPPKSLL-RYALILDIVRPTCRRSTCFTKGYGHYVEGTGSVLQTATDVEIDSVYNSLE 313
Query: 321 ---QPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAV 377
+ + K SSLK +RYFTPRE+ANLH FP F FP ++ +QRY LLGNSL++ +
Sbjct: 314 LLNEEEKLAKLSSLK---MRYFTPREIANLHGFPETFGFPEEVTTKQRYRLLGNSLNVHI 370
Query: 378 V 378
V
Sbjct: 371 V 371
>gi|355725970|gb|AES08721.1| tRNA aspartic acid methyltransferase 1 [Mustela putorius furo]
Length = 366
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 208/402 (51%), Gaps = 65/402 (16%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSGIGGM +L ++ + AQVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 EPLRVLELYSGIGGMHQALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D + L+SPPCQP+TR LQK P + +ENV
Sbjct: 62 LEEFDKLSFNMILMSPPCQPFTR--LQKL----------------------PKYILLENV 97
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC--Q 185
GFE S T +I+ L N + QEF+LSP G+P SR RYF +AK +PL F+ Q
Sbjct: 98 KGFEVSSTRDLLIQTLENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQ 157
Query: 186 LLNN-QLLRSPSP----LLGNDDMTVITKHDQPDDSWDKLLESCDPVERF---LEFSNSG 237
+L + S P + + M K +P+ DK C E LE
Sbjct: 158 VLTEFPKIESEHPERNRIEAENKME--RKKIEPNICSDK-SRPCSGKETILFKLETLEEI 214
Query: 238 DQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSK 297
D+ + + LS + DF E+ V++++ +FL P SL+ R+ DIV P +
Sbjct: 215 DRKHHQDSDLS--VQMLKDF--LEDDVDMNQ-----YFLPPKSLL-RYALLFDIVKPTCR 264
Query: 298 RCCCFTKSYYRYVKGTGSLLATVQ--------------PKNKGKASSLKEQHLRYFTPRE 343
R CFTK Y Y++GTGS+L T + P+ + K + L LRYFTP+E
Sbjct: 265 RSTCFTKGYGSYIEGTGSVLQTTEDVQIEDIYKSLTNLPQEE-KITKLLMLKLRYFTPKE 323
Query: 344 VANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
+A+L FP +F FP ++++QRY LLGNSL++ VVA L++ L
Sbjct: 324 IASLLGFPSEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKIL 365
>gi|440789532|gb|ELR10839.1| C5 cytosine-specific DNA methylase superfamily protein
[Acanthamoeba castellanii str. Neff]
Length = 366
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 190/402 (47%), Gaps = 82/402 (20%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVS--AQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
A R LEFYSG+GGM +++ +A + +VV A+D+ND AN Y NF P ++ +L
Sbjct: 9 ALRALEFYSGVGGMHWAVGRAGLEQRVKVVGAYDLNDGANRTYRHNFPDTPR--DLASLD 66
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E++ + A WL+SPP + SF +L L+ +PP L +ENV
Sbjct: 67 VHEVEAHAADIWLMSPPSR-----------------SFAHLLGLLARLDRPPSYLLLENV 109
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVP---------------YSRPRYFCL 174
GFE S++ +++ LA Y QEF+LSP QFG+P +R RYF L
Sbjct: 110 YGFERSESRTQLVAALAQGGYRHQEFLLSPTQFGIPNQARRAPPPPPPLCTTTRLRYFLL 169
Query: 175 AKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFS 234
AKR P SF +PL T+ DP+ RF+
Sbjct: 170 AKRAPHSFAW-----------APLAVASSSTI------------------DPL-RFVPAC 199
Query: 235 NSGDQVNTETGFLS-TGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVY 293
+ A + DF +E D +S+ VP +L+ + G DIV
Sbjct: 200 AEQAATAADPAQPEPAAVAPLSDF------LEPDDSLSVHAHRVPDALVWKKGLLFDIVG 253
Query: 294 PDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQH---------LRYFTPREV 344
+ R CCFTK+Y R+V+G GS+L T P G A E LRYFTPREV
Sbjct: 254 KEDMRSCCFTKAYARFVEGAGSVLRTGPPLVDGWADGATEDDIGGALLALGLRYFTPREV 313
Query: 345 ANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
A LH FP F FP RQ+Y LGNSL++ VVA LL+YL
Sbjct: 314 ARLHGFPDSFGFPEGTGERQKYQQLGNSLNVLVVARLLRYLL 355
>gi|426201930|gb|EKV51853.1| hypothetical protein AGABI2DRAFT_198459 [Agaricus bisporus var.
bisporus H97]
Length = 371
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 202/414 (48%), Gaps = 85/414 (20%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP---YQGNIQNLTA 70
R LEFY+GIGG+ +L ++ V VV+AFD + A VY +N H P +I L+
Sbjct: 4 RALEFYAGIGGLHLALQRSSVHGSVVQAFDWDRVACQVYRIN--HSPDIIKNTDISKLSV 61
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQ-KQSSDARAFSFLKILE-LIPHTVKP---PHMLF 125
+L + A WLLSP CQPYT K ++D RA SFL +++ ++P K P L
Sbjct: 62 TQLANFNADFWLLSPACQPYTVLNPNAKGATDPRARSFLYLVQDILPQLAKMNALPSRLL 121
Query: 126 VENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VENV GFETS T ++ + + Y T E +L+PLQFGVP SR RY+ LAK+ PL F
Sbjct: 122 VENVAGFETSFTRQTLVSAMRSLGYRTLELLLTPLQFGVPNSRLRYYFLAKKDPLRFAHT 181
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKH------DQPDDSWDKLLESCDPVERFLEFSNSGDQ 239
G +D+ I +H D DD +D D ER +
Sbjct: 182 --------------GKEDIDRIWRHIPGQGEDWIDDRFD------DSKER------NRVH 215
Query: 240 VNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRC 299
+ +L T AE + D++ +P ++ +WGS D++YP S R
Sbjct: 216 IPRLNSYLDT---------PAE---------TADYYTIPDKVLFKWGSLFDVIYPSSCRS 257
Query: 300 CCFTKSYYRYVKGTGSLL---------------ATVQPKNKGKASSLKEQHLRYFTPREV 344
CCFT+ Y + V+G GS+L A +P N L LRYF+P E+
Sbjct: 258 CCFTRGYTQLVRGAGSILQMNEDLDTTTVFDEFAVARPDNPDAVRILDPLRLRYFSPEEL 317
Query: 345 ANLHSF--------PGDFQFPHH--LSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
L F P F++P + LR +Y L+GNS+++ VV L++YLF +
Sbjct: 318 LRLFGFNPRIDSLEPAYFKWPDTKVVRLRSQYRLIGNSVNVTVVQALIEYLFIE 371
>gi|344277973|ref|XP_003410771.1| PREDICTED: LOW QUALITY PROTEIN: tRNA
(cytosine(38)-C(5))-methyltransferase-like [Loxodonta
africana]
Length = 441
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 207/384 (53%), Gaps = 39/384 (10%)
Query: 29 LMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGN-IQNLTAAELDMYGAHAWLLSPPC 87
L ++ + AQVV A D+N AN+VY+ NF H I+ +T E D + L+SPPC
Sbjct: 71 LKESCIPAQVVAAVDVNTVANEVYKYNFPHTLLLAKAIEGITLEEFDRLSFNMILMSPPC 130
Query: 88 QPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILAN 147
QP+TR GLQ +D R SFL IL+++P K P + +ENV GFE S T +I+ + N
Sbjct: 131 QPFTRIGLQGDKADPRTSSFLYILDILPRLKKLPKYILLENVKGFEVSSTRDMLIQTIEN 190
Query: 148 SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDD---- 203
+ QEF+LSP G Y R R+ L+K S LL P +G+++
Sbjct: 191 CGFQHQEFLLSPNSVGTIYLRFRHRLLSKESFDSLYIFTXFQILLEFPK--IGSENPQKH 248
Query: 204 -----MTVITKHDQPDDSWDKLLESCDPVERF---LEFSNSGDQVNTETGFLSTGTAAVD 255
K +P+ D + C E LE + D+ + + LS +
Sbjct: 249 AIDAEKKTEEKKIEPNICLDGSTQ-CSGKETILFKLETAKEIDRKHQQNSDLS--VQMLK 305
Query: 256 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 315
DF E +++++ +FL P L++R+ +DIV P +R CFTK Y R+++GTGS
Sbjct: 306 DF--LEHDIDINQ-----YFLSP-KLLQRYAFILDIVKPTCRRSTCFTKGYGRFIEGTGS 357
Query: 316 LLAT---VQPKNKGKA-SSLKEQH---------LRYFTPREVANLHSFPGDFQFPHHLSL 362
+L T VQ ++ K+ S+L E+ LRYFTP+E+ANL FP +F FP ++++
Sbjct: 358 VLQTAEDVQIESIYKSLSNLSEEEKITKLLMLKLRYFTPKEIANLLGFPPEFGFPENVTV 417
Query: 363 RQRYALLGNSLSIAVVAPLLQYLF 386
+QRY LLGNSL++ +VA L++ LF
Sbjct: 418 KQRYCLLGNSLNVHIVAKLIKILF 441
>gi|390357256|ref|XP_001200726.2| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like
[Strongylocentrotus purpuratus]
Length = 404
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 212/426 (49%), Gaps = 92/426 (21%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
RV+EF+SG+GG+ + F ++D A+
Sbjct: 20 LRVVEFFSGVGGLHCA------------GFTVDDFAS----------------------- 44
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
+ A +++SPPCQP+TR GL+ +DAR +F I+ + K P L VENV GF
Sbjct: 45 ---FDADMFVMSPPCQPFTRVGLKGDKNDARTNAFFNIMRNLAEMAKKPTYLLVENVKGF 101
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR----CQLLN 188
+TS+T ++E L +Y+ QEF+LSP+ G+P R RYF LAK++PL F+ QL+
Sbjct: 102 DTSETRNFLVETLQKCNYVFQEFLLSPMNIGIPNQRVRYFMLAKQRPLQFKEEHGTQLVQ 161
Query: 189 NQLLRSPSPLLGND---------DMTVITKHDQPD----DSWDKLLESCDPV----ERFL 231
+ R PL+ N+ D ++++ +Q + +S ++ + + E+ +
Sbjct: 162 H---RVNMPLMPNEIKETSRLVCDNSMVSSQEQTNMELTESRERTGQDESSMVSLNEQSI 218
Query: 232 EFSNSGDQVNTETGFLSTGTAAVDDFGAA-----EETVEVD--RCV-----------SID 273
E +N + + + + +D ++ +ET E D R + S+
Sbjct: 219 ERKTDEQHLNEKERTDNVKSGSCEDMVSSSEQNEQETGEDDERRKIGDYLQADLSEESMA 278
Query: 274 HFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT------------VQ 321
+L+P ++ ++ + MDIV + + CFTK+Y YV+GTGS+L T
Sbjct: 279 EYLIPDRILLKYVNVMDIVTVEDTKTRCFTKAYAYYVEGTGSVLRTDLSADMSSAFSSGS 338
Query: 322 PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPL 381
+ + LK LRYF+PREVANLH FP DF FP + +Q+Y LLGNSL++ ++A L
Sbjct: 339 CSDDERLERLKALRLRYFSPREVANLHHFPQDFGFPECSTKKQKYRLLGNSLNVTLLAQL 398
Query: 382 LQYLFA 387
+ Y+ A
Sbjct: 399 ISYMVA 404
>gi|195350999|ref|XP_002042024.1| GM26726 [Drosophila sechellia]
gi|194123848|gb|EDW45891.1| GM26726 [Drosophila sechellia]
Length = 330
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 183/388 (47%), Gaps = 87/388 (22%)
Query: 25 MRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAAELDMYGAHAWLL 83
M Y+ A + ++V A D+N AN VYE N+G + NIQ+L+ E+ A+ L+
Sbjct: 1 MHYAFKYAQLDGEIVAALDVNTVANAVYEHNYGSNLVKTRNIQSLSVKEVTKLQANMLLM 60
Query: 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 143
SPPCQP+TRQGLQ+ + D R+ + + LIP ++L +ENV GFE+S + IE
Sbjct: 61 SPPCQPHTRQGLQRDTEDKRSDALTHLCGLIPECQNLQYIL-MENVKGFESSQARNQFIE 119
Query: 144 ILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDD 203
L S + +EFIL+P QF VP +R RY+C+A++ G D
Sbjct: 120 SLERSGFHWREFILTPTQFNVPNTRYRYYCIARK----------------------GAD- 156
Query: 204 MTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTET-GFLSTGTAAVDDFGAAEE 262
F +GDQ+ E G ++ A EE
Sbjct: 157 -----------------------------FPFAGDQIWEEMPGAIAQNQALSQIAEIVEE 187
Query: 263 TVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS------- 315
V D FLVP ++ + MDI++P R CFTK Y Y +GTGS
Sbjct: 188 NVSAD-------FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAYTPLSE 240
Query: 316 --------LLATVQPKNKGKASS----------LKEQHLRYFTPREVANLHSFPGDFQFP 357
L+ + NK S L + LRYFTPREVA L SFP DF+FP
Sbjct: 241 DESHRIFELVKEIDTSNKDAPKSENILQQRLDLLHQVKLRYFTPREVARLMSFPEDFEFP 300
Query: 358 HHLSLRQRYALLGNSLSIAVVAPLLQYL 385
+ RQ+Y LLGNS+++ VV L++ L
Sbjct: 301 PETTNRQKYRLLGNSINVKVVGELIKLL 328
>gi|256078707|ref|XP_002575636.1| DNA (cytosine-5)-methyltransferase [Schistosoma mansoni]
gi|339776689|gb|AEK05284.1| DNA-methyltransferase 2 isoform 1 [Schistosoma mansoni]
Length = 368
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 130/401 (32%), Positives = 206/401 (51%), Gaps = 62/401 (15%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-PYQGNIQNLTAAE 72
RVLE YSGIGGM + ++ V +VV A +IN A DVY+ NF + I++ +
Sbjct: 2 RVLELYSGIGGMHIAFKESTVKHEVVAAVEINGVATDVYKYNFPNTLTLNRVIESFSPDY 61
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
+ A+ W L PPCQP+TR G + +D R+ SF +L+LI ++ P + +ENV GF
Sbjct: 62 VCSLNANVWSLCPPCQPFTRLGKRMCEADNRSSSFFHVLDLI--SILKPAGIILENVKGF 119
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQL- 191
E S+ ++IE+L + DY ++F+LSPLQFG+P R R++ LA+ + S+ +
Sbjct: 120 EHSEPWRRLIEVLNSCDYEYRQFLLSPLQFGIPNCRLRFYLLARLRSSSWNSNFKMGKSE 179
Query: 192 ---LRSP--SPLLGNDDMT----VITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNT 242
LR P +P+L T VI+ + DD++ + ++ C P+ FL + +
Sbjct: 180 SIDLRPPIDAPMLPGCQCTSCSGVISHIEHTDDNFTEYIQFCRPISEFLLVPSDSSK--- 236
Query: 243 ETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCF 302
E FL ++C ++R+ +DIV K+ CF
Sbjct: 237 ELYFLD------------------EKC------------LQRYFRVLDIVRSCDKKTRCF 266
Query: 303 TKSYYRYVKGTGSLLAT-VQPKNKGKASSLKEQH---------------LRYFTPREVAN 346
TK Y + ++GTGS+ T ++ + K ++ E + LR+F REVAN
Sbjct: 267 TKGYSKRLEGTGSVFQTSMENETSEKITNFYEANKEDEQAVLQYAKLLKLRFFHSREVAN 326
Query: 347 LHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
+ FP F FP H++ +QR LLGNS++I VV+ L+ + F
Sbjct: 327 MMCFPKSFDFPEHITEKQRLRLLGNSVNILVVSHLIYWAFG 367
>gi|409083019|gb|EKM83376.1| hypothetical protein AGABI1DRAFT_123710 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 378
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 203/421 (48%), Gaps = 92/421 (21%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP---YQGNIQNLTA 70
R LEFY+GIGG+ +L ++ V VV+AFD + A VY +N H P +I L+
Sbjct: 4 RALEFYAGIGGLHLALQRSSVHGSVVQAFDWDRVACQVYRIN--HSPDIIKNTDISKLSV 61
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQ-KQSSDARAFSFLKILE-LIPHTVKP---PHMLF 125
+L + A WLLSP CQPYT K ++D RA SFL +++ ++P K P L
Sbjct: 62 TQLANFNADLWLLSPACQPYTVLNPNAKGATDPRARSFLYLVQDILPQLAKMNALPSRLL 121
Query: 126 VENVVGFE-------TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VENV GFE TS T ++ + + Y T E +L+PLQFGVP SR RY+ LAK+
Sbjct: 122 VENVAGFESPPSLGKTSFTRQTLVSAMRSLGYRTLELLLTPLQFGVPNSRLRYYFLAKKD 181
Query: 179 PLSFRCQLLNNQLLRSPSPLLGNDDMTVITKH------DQPDDSWDKLLESCDPVERFLE 232
PL F G +D+ I +H D DD +D D ER
Sbjct: 182 PLRFAHT--------------GKEDIDRIWRHIPGQGEDWIDDRFD------DSKER--- 218
Query: 233 FSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIV 292
+ + T +L T AE + D++ +P ++ +WGS D++
Sbjct: 219 ---NRVHIPTLNSYLDT---------PAE---------TADYYPIPDKVLFKWGSLFDVI 257
Query: 293 YPDSKRCCCFTKSYYRYVKGTGSLL---------------ATVQPKNKGKASSLKEQHLR 337
YP S R CCFT+ Y + V+G GS+L A +P N L LR
Sbjct: 258 YPSSCRSCCFTRGYTQLVRGAGSILQMNEDLDTTTVFDEFAVARPDNPDAVRILDPLRLR 317
Query: 338 YFTPREVANLHSF--------PGDFQFPHH--LSLRQRYALLGNSLSIAVVAPLLQYLFA 387
YF+P E+ L F P F++P + LR +Y L+GNS+++ VV L++YLF
Sbjct: 318 YFSPEELLRLFGFNPRIDSLEPAYFKWPDTKVVRLRSQYRLIGNSVNVTVVQALIEYLFI 377
Query: 388 Q 388
+
Sbjct: 378 E 378
>gi|195472313|ref|XP_002088445.1| GE18570 [Drosophila yakuba]
gi|194174546|gb|EDW88157.1| GE18570 [Drosophila yakuba]
Length = 331
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 184/387 (47%), Gaps = 85/387 (21%)
Query: 25 MRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAAELDMYGAHAWLL 83
M Y+ A + ++V A DIN AN VY N+GH + NIQ+L+ E+ A+ L+
Sbjct: 1 MHYAFKYAQLEGEIVAAMDINTVANAVYAHNYGHNFVKTRNIQSLSVKEVGKLQANMLLM 60
Query: 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 143
SPPCQP+TRQGLQK + D R+ + I LIP ++L +ENV GFE S + IE
Sbjct: 61 SPPCQPHTRQGLQKDTEDKRSDALTHICGLIPECQNLQYIL-MENVKGFEISQARNQFIE 119
Query: 144 ILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDD 203
L S++ +EFIL+P QF VP +R RY+C+A RK F P G+
Sbjct: 120 ALERSEFHWREFILTPTQFNVPNTRYRYYCIA-RKGADF--------------PFAGS-- 162
Query: 204 MTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEET 263
K+ E+ + G A + E
Sbjct: 163 ---------------KIWEA-----------------------MPGGIAQNQNLSQISEI 184
Query: 264 VEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS-------- 315
VE + VS D FLVP ++ + MDI++P R CFTK Y Y +GTGS
Sbjct: 185 VEEN--VSSD-FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAYTPLSEE 241
Query: 316 -------LLATVQPKNKGKASS----------LKEQHLRYFTPREVANLHSFPGDFQFPH 358
L+ + N S L + LRYFTPREVA L SFP DF+FP
Sbjct: 242 ESHRIFELVKEIDTNNHDDVKSEKILEQRLDLLHQVKLRYFTPREVARLMSFPEDFEFPP 301
Query: 359 HLSLRQRYALLGNSLSIAVVAPLLQYL 385
+ RQ+Y LLGNS+++ VV L++ L
Sbjct: 302 ETTNRQKYRLLGNSINVKVVGELIKLL 328
>gi|328774327|gb|EGF84364.1| hypothetical protein BATDEDRAFT_29368 [Batrachochytrium
dendrobatidis JAM81]
Length = 349
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 193/392 (49%), Gaps = 71/392 (18%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-GNIQNLTAAE 72
+VLEFYSGIGG +L K ++ QV++AFD+N AN VY+ P NI L+ +
Sbjct: 9 KVLEFYSGIGGFHAALSKTHIAFQVLQAFDMNINANLVYQTTHPTVPVSVRNIGFLSPID 68
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
LD + A +LLSPPCQPY+R+G +K +D+RA SF+++L+ I + P + VENV GF
Sbjct: 69 LDAFQADMFLLSPPCQPYSRKGSRKGINDSRADSFVQLLDSIKKMQQKPKWMLVENVYGF 128
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 192
ETSDT + E L +Y Q F L+P FG+PYSRPR F LAK + + NQ
Sbjct: 129 ETSDTFTILKEKLVG-EYDIQSFELNPWHFGIPYSRPRIFILAKLR--------VCNQC- 178
Query: 193 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESC-DPVERFLEFSNSGDQVNTETGFLSTGT 251
D + T Q D E C D + L GFL
Sbjct: 179 --------KQDYRLDTDSHQGDH------EKCRDTTPQIL------------AGFLDNPN 212
Query: 252 AAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVK 311
+ +D E D + HF D+V P+S R CCFTK+Y Y +
Sbjct: 213 S--EDTNPYMLVTEQDLWAAARHF--------------DVVGPESTRSCCFTKAYGSYAR 256
Query: 312 GTGSLLAT-----VQPKNKGKAS-----------SLKEQHLRYFTPREVANLHSFPGD-F 354
G GS+ T ++ +GK+ L E LRYF+ E+ LH FP +
Sbjct: 257 GGGSVRVTKKKPSMEAAREGKSKWWDELSKTRPCPLVELKLRYFSSSEMGRLHGFPKEQL 316
Query: 355 QFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
+FP + QR+ L+GNSL + +V L++Y+
Sbjct: 317 KFPESTTQIQRFKLIGNSLHVDIVRMLIEYMM 348
>gi|56385094|gb|AAV85978.1| 5' cytosine DNA methyl transferase-like protein [Pristionchus
pacificus]
Length = 313
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 186/383 (48%), Gaps = 79/383 (20%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQ 66
++GE +VLEFY GIGG+ ++L + + + AFDIN N +Y NF + + NIQ
Sbjct: 5 HEGEEVKVLEFYCGIGGIHFALKRTSIPFHIAAAFDINTTTNVIYRHNFPSTKLKESNIQ 64
Query: 67 NLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
++ + LD GA W +SPPCQP+T +G +K D R SF K+L + P +F+
Sbjct: 65 GVSVSSLDKLGAELWTMSPPCQPFTLKGNRKGDDDPRCDSFKKLLHCLNKMSNRPRWIFI 124
Query: 127 ENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
ENV F ++ H+ +IE L Y +E++LSP+Q G+P SRPRY+ LA
Sbjct: 125 ENVSAFHSTSMHSTLIETLNTIGYRIEEYMLSPVQLGIPNSRPRYYLLA----------- 173
Query: 187 LNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQV--NTET 244
L+ P + N+ ++ L + D VE E S + + N +T
Sbjct: 174 ---SLMEGP---VHNEYVS-------------HLYQYIDGVEE-CEMSTVREYLSDNVDT 213
Query: 245 GFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTK 304
+LS+ ++ LS++E P S CFTK
Sbjct: 214 AYLSSDKVDANN----------------------LSIVE----------PSSISSSCFTK 241
Query: 305 SYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQ 364
SY +++ G GS L T +R F+PREVA+L SFP F +PH ++ +Q
Sbjct: 242 SYTQFLVGCGSYLRTC-------------SGIRPFSPREVASLMSFPNSFSWPHQITQKQ 288
Query: 365 RYALLGNSLSIAVVAPLLQYLFA 387
Y LGNS+++ VV+ LL+ L
Sbjct: 289 VYRALGNSVNVLVVSKLLERLLT 311
>gi|336363407|gb|EGN91799.1| hypothetical protein SERLA73DRAFT_118184 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378383|gb|EGO19541.1| hypothetical protein SERLADRAFT_453499 [Serpula lacrymans var.
lacrymans S7.9]
Length = 368
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 133/405 (32%), Positives = 197/405 (48%), Gaps = 70/405 (17%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLTAAE 72
R LEFYSGIGG+ +L ++ S V++AFD + A VY N+G + + +I +L+A +
Sbjct: 4 RALEFYSGIGGLHLALSRSLRSGSVIQAFDWDQTACKVYAENYGFKLISKVDISSLSALD 63
Query: 73 LDMYGAHAWLLSPPCQPYTRQG-LQKQSSDARAFSFLKILE-LIPHTVKP---PHMLFVE 127
L Y A WLLSP CQPYT +K +SD RA SFL ++E ++P + P + +E
Sbjct: 64 LASYRADIWLLSPSCQPYTVLNPSRKGASDPRAASFLHLIEDVLPELARQYSRPRYILIE 123
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 187
NV GFE S T ++ L Y E +L+PLQFG+P SR RY+ LA+ P
Sbjct: 124 NVAGFEMSSTRQTLLSTLKEIGYFVVELLLTPLQFGIPNSRLRYYLLARLIPFE------ 177
Query: 188 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFL 247
S L + D I +H + CD + +NT
Sbjct: 178 --------SVSLQDSDCGDIWRHIPG--------QGCDWTD--------PRSINT----- 208
Query: 248 STGTAAVDDFGAAE--ETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
A DDF E E ++ + V+I + V ++++WG DIV P S+R CCFT+
Sbjct: 209 -----AGDDFPVQELREYLDAENDVNIHSYKVTDRVLQKWGHLFDIVLPSSRRTCCFTRG 263
Query: 306 YYRYVKGTGSLLATVQPKN----------------KGKASSLKEQHLRYFTPREVANLHS 349
Y R V+ +GS+L N +G L + LRYFTP E+ L
Sbjct: 264 YTRLVERSGSILQANDDLNTTAVFDEFRLKHSQGIEGAVRILDQLGLRYFTPDELLRLFH 323
Query: 350 F------PGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
F +P +++L+ +Y L+GNS+++ VV L+ YL +
Sbjct: 324 FESRHYPSNSLIWPDNITLKTKYKLIGNSVNVEVVTRLIDYLLEK 368
>gi|395323231|gb|EJF55715.1| S-adenosyl-L-methionine-dependent methyltransferase [Dichomitus
squalens LYAD-421 SS1]
Length = 358
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 187/390 (47%), Gaps = 57/390 (14%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-GNIQNLTAAELD 74
LEFYSGIGG+ +L ++++ +V AFD + A VY N H Q +I +LTA ++
Sbjct: 6 LEFYSGIGGLHCALAQSNLDGSIVHAFDWDQAACRVYSANHSHVVVQKADISSLTAPDIA 65
Query: 75 MYGAHAWLLSPPCQPYT-RQGLQKQSSDARAFSFLKILE-LIPHTV---KPPHMLFVENV 129
A WLLSP CQPYT L K + D RA SF++++E ++P V K P + VENV
Sbjct: 66 ELDATLWLLSPSCQPYTVLNPLAKGAEDPRAKSFIRLMEEVLPELVQMGKHPQYMLVENV 125
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 189
GFETS T +++ L Y T E +L+PLQFG+P SR RY+ LAK PL+F
Sbjct: 126 AGFETSSTRIRLLATLRAVKYSTVELLLTPLQFGIPNSRLRYYLLAKASPLAF------- 178
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249
+D D W + + D + T
Sbjct: 179 -----------------ANANDSADRIWRHIP------------GHGSDWTDPRTQSEEE 209
Query: 250 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 309
+ E ++ D +P ++E+WG DIV P KR CCFT+ Y +
Sbjct: 210 SSEVE--VAEVREYLDEDTGADPPSHAIPQRVLEKWGRLFDIVRPSDKRTCCFTRGYTKL 267
Query: 310 VKGTGSLLATVQPKNKGKASS----LKEQHLRYFTPREVANLHSF--PGD-------FQF 356
+ GS+L + ++ + L+ LRYF+P E+ L +F P F +
Sbjct: 268 AERAGSVLQMNEDLDRAGDDAAVRLLEPLKLRYFSPTELLRLFAFLPPNSDGQGRRRFVW 327
Query: 357 PHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
P +S + +Y L+GNS+++ VV L+ YLF
Sbjct: 328 PEDISTKTKYRLIGNSVNVRVVTELINYLF 357
>gi|170063953|ref|XP_001867327.1| DNA (cytosine-5)-methyltransferase [Culex quinquefasciatus]
gi|167881402|gb|EDS44785.1| DNA (cytosine-5)-methyltransferase [Culex quinquefasciatus]
Length = 345
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 129/396 (32%), Positives = 189/396 (47%), Gaps = 78/396 (19%)
Query: 4 DMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-HRPYQ 62
D + + +RVLE +SGIGGM Y++ +A +VV A +IN AN +Y NFG
Sbjct: 7 DQNEQNPSEYRVLELFSGIGGMHYAIRRAGKPFRVVAAMEINPVANTIYNHNFGPGAATN 66
Query: 63 GNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH 122
NI +LT +D GA+ L+SPPCQP+TR G K D RA F+ + +L+ K P
Sbjct: 67 SNILSLTPERIDQLGANVILMSPPCQPFTRNGHFKDVEDRRADPFVHLCDLLD---KIPQ 123
Query: 123 MLFV--ENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
+ FV ENV GFE S + L + + +EFILSP +GVP +R RY+C+AKR P
Sbjct: 124 VRFVLLENVKGFERSQACEQYKVRLTAAGFFFREFILSPHNYGVPNTRHRYYCVAKRTPF 183
Query: 181 SFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQV 240
G ++ H++ S + E +P + GD +
Sbjct: 184 E------------------GPTQEIIVKPHNKHVKSLKSIGEIVEP--------DDGDHL 217
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
N +L+ L+ + + MD+ PDS+
Sbjct: 218 N--------------------------------RYLLKPDLLRKRLAIMDVCTPDSRNSM 245
Query: 301 CFTKSYYRYVKGTGSLLATVQPKN-------KGKASSLKEQ-------HLRYFTPREVAN 346
CFTK+Y Y +GTGS+ + + ++ G A +EQ +RYFTP+EVA
Sbjct: 246 CFTKAYTHYAEGTGSVYSPLAREDFDRIYAQIGLAEDAEEQDRLRASLKVRYFTPKEVAR 305
Query: 347 LHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLL 382
L SFP F FP + +Q Y +LGNS+++ VV+ L
Sbjct: 306 LMSFPEGFGFPKGTTDKQCYRVLGNSINVLVVSSLF 341
>gi|328869161|gb|EGG17539.1| DNA (cytosine-5-)-methyltransferase [Dictyostelium fasciculatum]
Length = 373
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 191/395 (48%), Gaps = 79/395 (20%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF------------------ 56
++E++SGIGGM YS + V V ++FDIN AN Y +
Sbjct: 3 IIEYFSGIGGMYYSAKLSGVPFTVKQSFDINTTANTCYNYSIHSLSNTDNNNNTTNSKSK 62
Query: 57 --GHRPYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELI 114
+I LT +L+ Y A+ WL+SPPCQP+ R GL+K D R SF+ +L L+
Sbjct: 63 KKNVVVNNKSIDALTVKDLESYKANTWLMSPPCQPFCRVGLEKGLEDNRTNSFVNLLTLL 122
Query: 115 PHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 174
PP + +ENV GFE SD +IE Y QEF LSP QFG+P R RYFC+
Sbjct: 123 GKLESPPTYILIENVFGFEKSDARELLIETFMRLKYQYQEFHLSPTQFGLPNQRLRYFCI 182
Query: 175 AKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFS 234
AK LS + + +L+ P + + I+++ L++ +P E +
Sbjct: 183 AK---LSDKPTIRKINILKE-IPTFKTIEPSAISQY----------LDTTNPEETY---- 224
Query: 235 NSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYP 294
+ F +ET L+ + G DI
Sbjct: 225 --------------------EKFKIPQET-----------------LLSKRGMLFDIKTM 247
Query: 295 DSKRCCCFTKSYYRYVKGTGSLL---ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFP 351
K CFT+SY ++V+GTGS+L +++P + +SL LRYFTP+E+ LH FP
Sbjct: 248 GEKTTNCFTRSYSKFVEGTGSVLQLNESLKP-DASDPNSLLPLRLRYFTPKEITRLHGFP 306
Query: 352 GDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
+F+F L+ +Q + L+GNSL++ +V+ L++YL+
Sbjct: 307 EEFKFHPSLTSQQCFRLIGNSLNVKIVSELIKYLY 341
>gi|384497196|gb|EIE87687.1| hypothetical protein RO3G_12398 [Rhizopus delemar RA 99-880]
Length = 285
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 166/322 (51%), Gaps = 57/322 (17%)
Query: 83 LSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI 142
+SPPCQPYTR GLQ+ S DARA SFL +L+++ P L VENV GFE SD+ ++
Sbjct: 1 MSPPCQPYTRLGLQQGSEDARAKSFLHLLKVLKEMKNKPKYLLVENVKGFEESDSREMLV 60
Query: 143 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 202
+L S+Y QEF+L+PLQ G+P SR RY+ LAK KP F + NN + P ++
Sbjct: 61 NVLQESNYSFQEFLLTPLQLGIPNSRMRYYLLAKLKPSEFAVPVTNNIIKYIPL----SE 116
Query: 203 DMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEE 262
M+ ++ ++ D+ +P+ +LE + +D+
Sbjct: 117 KMSEAFIDNRGEEQVDE--NVVEPISNYLE-------------------SDIDE------ 149
Query: 263 TVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL----- 317
D +L+ + + DIV S+R CCFTK YY Y +GTGS+L
Sbjct: 150 ----------DSYLLTDKTLVKNVQVFDIVKKSSRRSCCFTKGYYHYAQGTGSILQMNEE 199
Query: 318 ----ATVQPKNKGKASSLKEQ-------HLRYFTPREVANLHSFPGDFQFPHHLSLRQRY 366
+Q K K ++Q LRYFTPREV+NL FP F FP S++Q+Y
Sbjct: 200 LDTATVIQEAEKYKGVDEEKQLQLLRSLKLRYFTPREVSNLMGFPQHFSFPETSSVKQKY 259
Query: 367 ALLGNSLSIAVVAPLLQYLFAQ 388
LGNS+++ +V+ L+ YL +
Sbjct: 260 RTLGNSINVKLVSQLMCYLLKE 281
>gi|328710652|ref|XP_001949338.2| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Acyrthosiphon
pisum]
Length = 328
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 199/385 (51%), Gaps = 69/385 (17%)
Query: 13 WRVLEFYSGIGGMRYSLMKADV-SAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTA 70
RV+EF+SGIGGM ++L + ++ + +VV A DIN AN VY F + NI +L+
Sbjct: 1 MRVIEFFSGIGGMHFALKECNLENFEVVLAVDINTVANAVYRHFFPSTNLRDLNILSLSP 60
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILE-LIPHTVKPPHMLFVENV 129
+ D Y L+SPPCQP+TR GL K +D R L I+E +IP + ++L VENV
Sbjct: 61 EQFDAYHPDILLMSPPCQPFTRNGLVKDINDERTKPLLHIIENIIPKSESLKYIL-VENV 119
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 189
GFE+S K++ L+ S + +EF+LSP+ FG+ SR RY+ LAK+KPL F L N+
Sbjct: 120 KGFESSLARDKLVNALSQSGFTFKEFLLSPVHFGICNSRLRYYLLAKKKPLDFAISLPND 179
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249
+IT ++ WD L C V++
Sbjct: 180 ----------------IIT-----ENYWDDKL--CSRVQQ-------------------- 196
Query: 250 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 309
V D + +T ++ +L+ + + G A+DIV SKR CCFT+SY Y
Sbjct: 197 ----VSDVLSESDT-------ELEEYLINDKQLLKGGKALDIVTKHSKRSCCFTRSYSSY 245
Query: 310 VKGTGSLLATVQPKNKGKASS--------LKEQHLRYFTPREVANLHSFPGDFQFPHHLS 361
+ GTGS+ +++ +N + S LK LR+FTP EVA FP FP +S
Sbjct: 246 LCGTGSVYSSLCEENIKEIISNNDDNLEVLKSLKLRFFTPAEVAKFMCFPVS-DFP--VS 302
Query: 362 LRQRYALLGNSLSIAVVAPLLQYLF 386
++ Y LLGNS+++ VV+ LL L
Sbjct: 303 KKKAYQLLGNSINVYVVSRLLCLLL 327
>gi|21428368|gb|AAM49844.1| GM14972p [Drosophila melanogaster]
Length = 331
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 182/387 (47%), Gaps = 85/387 (21%)
Query: 25 MRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAAELDMYGAHAWLL 83
M Y+ A + Q+V A D+N AN VY N+G + NIQ+L+ E+ A+ L+
Sbjct: 1 MHYAFNYAQLDGQIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLSVKEVTKLQANMLLM 60
Query: 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 143
SPPCQP+TRQGLQ+ + D R+ + + LIP + ++L +ENV GFE+S + IE
Sbjct: 61 SPPCQPHTRQGLQRDTEDKRSDALTHLCGLIPECQELEYIL-MENVKGFESSQARNQFIE 119
Query: 144 ILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDD 203
L S + +EFIL+P QF VP +R RY+C+A++ S P G
Sbjct: 120 SLERSGFHWREFILTPTQFNVPNTRYRYYCIARKG---------------SDFPFAGG-- 162
Query: 204 MTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEET 263
W+++ G ++ A EE
Sbjct: 163 -----------KIWEEM-----------------------PGAIAQNQALSQIAEIVEEN 188
Query: 264 VEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS-------- 315
V D FLVP ++ + MDI++P R CFTK Y Y +GTGS
Sbjct: 189 VSPD-------FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAYTPLSED 241
Query: 316 -------LLATVQPKNKGKASS----------LKEQHLRYFTPREVANLHSFPGDFQFPH 358
L+ + N+ + S L + LRYFTPREVA L SFP +F+FP
Sbjct: 242 ESHRIFELVKEIDTSNQDASKSEKILQQRLDLLHQVRLRYFTPREVARLMSFPENFEFPP 301
Query: 359 HLSLRQRYALLGNSLSIAVVAPLLQYL 385
+ RQ+Y LLGNS+++ VV L++ L
Sbjct: 302 ETTNRQKYRLLGNSINVKVVGELIKLL 328
>gi|409050914|gb|EKM60390.1| hypothetical protein PHACADRAFT_167754 [Phanerochaete carnosa
HHB-10118-sp]
Length = 360
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 134/391 (34%), Positives = 189/391 (48%), Gaps = 62/391 (15%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-HRPYQGNIQNLTAA 71
+R +EFYSGIGG+ +L ++ V+ V+ A+D + A VY+ N+G Q +I LTA
Sbjct: 14 FRAVEFYSGIGGLHRALRRSTVNGCVIRAYDWDQAACQVYQANYGPGLVKQADISLLTAG 73
Query: 72 ELDMYGAHAWLLSPPCQPYT-RQGLQKQSSDARAFSFLKILE-LIPHTV---KPPHMLFV 126
EL A WLLSP CQPYT L K D RA SF +++ ++P V + P + V
Sbjct: 74 ELAGLRADLWLLSPSCQPYTVLNPLAKGPEDPRAKSFAHLIQGVLPELVDMGQQPRYILV 133
Query: 127 ENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
ENV GFE S T E L Y E +L+PLQFG P SR RY+ LAK +PL+FR
Sbjct: 134 ENVAGFEASSTR----EQLDARGYNCLELLLTPLQFGTPNSRLRYYLLAKWRPLAFRNAG 189
Query: 187 LNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 246
+L R P G D + D P
Sbjct: 190 TPGRLARH-IPGQGEDWSDPRSTSDAP--------------------------------- 215
Query: 247 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 306
D A E ++ D + + F +P ++E+WG DIV P KR CCFT+ Y
Sbjct: 216 -----VLFGDLKALHEYLDPDD--TNEEFKIPDRVLEKWGRLFDIVLPSGKRTCCFTRGY 268
Query: 307 YRYVKGTGSLLATVQPKNK-GKASSLK---EQHLRYFTPREVANLHSF-------PGDFQ 355
+ + GS+L + +K G A +++ LRYF+P+E+ L F G F
Sbjct: 269 TKLAERAGSVLQLNEDLDKRGNADTVRLLDPLRLRYFSPQELLRLFCFDPPSSLGAGSFI 328
Query: 356 FPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
+P S + +Y L+GNS+++ VV L+ YLF
Sbjct: 329 WPEKTSTKTKYKLIGNSVNVEVVCRLINYLF 359
>gi|392596911|gb|EIW86233.1| S-adenosyl-L-methionine-dependent methyltransferase [Coniophora
puteana RWD-64-598 SS2]
Length = 401
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 130/416 (31%), Positives = 203/416 (48%), Gaps = 67/416 (16%)
Query: 16 LEFYSGIGGMRYSLMKADV-SAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLTAAEL 73
+EFYSGIGG+ +L ++ + +AQ++ A+D + A VY N G + +I LTA EL
Sbjct: 4 VEFYSGIGGLHVALTRSSIPNAQLIRAYDWDQSACQVYTANHGPSIVSRTDISKLTANEL 63
Query: 74 DMYGAHAWLLSPPCQPYT--RQGLQKQSSDARAFSFLKILELIPHTV----KPPHMLFVE 127
GA W +SP CQPYT + + D RA SFL +++ + T+ K P L VE
Sbjct: 64 AALGADIWFMSPSCQPYTVLNPNRARGALDPRAQSFLHVIDDVLPTLCEEGKQPRYLLVE 123
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 187
NV GF+ S T +++ L Y T EF+L+P+QFG+P SR RY+ LAK PL F
Sbjct: 124 NVAGFQDSTTRTHLLDTLVRLGYTTSEFLLTPMQFGIPNSRLRYYLLAKASPLKFAGL-- 181
Query: 188 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFL 247
P+P L + +D+ ++ S P GD +
Sbjct: 182 -------PAPNLAR----------KRNDAGVEVEASSSPAV-LTYIPGQGDPWIDD---- 219
Query: 248 STGTAAVDD-------FGAAEETVEVDRCVSIDH--FLVPLSLIERWGSAMDIVYPDSKR 298
AAVDD E +D+ ++ + +P ++ +WG DIV P ++R
Sbjct: 220 RLSPAAVDDPKVSDSQLPGGELASYLDKLTDNEYETYKIPDKVLSKWGRLFDIVLPSARR 279
Query: 299 CCCFTKSYYRYVKGTGSLLATVQP-------------KNKGKASS---LKEQHLRYFTPR 342
CCFT+ Y + V+ GS+L + + G +S+ L+ LRYFTP
Sbjct: 280 TCCFTRGYTQLVERAGSILQMNEEMDTTETFDRFLALQRAGDSSTLDVLRPLRLRYFTPT 339
Query: 343 EVANLHSFPG----------DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
E+ L G +F++P ++SL+ +Y L+GNS+++ VV L+ Y++ +
Sbjct: 340 ELLRLFRIIGPRSNDNGEDQEFKWPENISLKTKYRLIGNSVNVEVVRRLIDYMYLE 395
>gi|6110464|gb|AAF03835.1|AF185647_1 DNA (5-cytosine) methyltransferase homolog [Drosophila
melanogaster]
Length = 345
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 182/386 (47%), Gaps = 87/386 (22%)
Query: 27 YSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAAELDMYGAHAWLLSP 85
Y+ A + Q+V A D+N AN VY N+G + NIQ+L+ E+ A+ L+SP
Sbjct: 17 YTFEDAQLDGQIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLSVKEVTKLQANMLLMSP 76
Query: 86 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 145
PCQP+TRQGLQ+ + D R+ + + LIP + ++L +ENV GFE+S + IE L
Sbjct: 77 PCQPHTRQGLQRDTEDKRSDALTHLCGLIPECQELEYIL-MENVKGFESSQARNQFIESL 135
Query: 146 ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMT 205
+ +EFIL+P QF VP +R RY+C+A++ G+D
Sbjct: 136 ERPGFHWREFILTPTQFNVPNTRYRYYCIARK----------------------GSD--- 170
Query: 206 VITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTET-GFLSTGTAAVDDFGAAEETV 264
F +G ++ E G ++ A EE V
Sbjct: 171 ---------------------------FPFAGGKIWEEMPGAIAQNQALSQIAEIVEENV 203
Query: 265 EVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS--------- 315
D FLVP ++ + MDI++P R CFTK Y Y +GTGS
Sbjct: 204 SPD-------FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAYTPLSEDE 256
Query: 316 ------LLATVQPKNKGKASS----------LKEQHLRYFTPREVANLHSFPGDFQFPHH 359
L+ + N+ + S L + LRYFTPREVA L SFP +F+FP
Sbjct: 257 SHRIFELVKEIDTSNQDASKSEKIVQQRLDLLHQVRLRYFTPREVARLMSFPENFEFPPE 316
Query: 360 LSLRQRYALLGNSLSIAVVAPLLQYL 385
+ RQ+Y LLGNS+++ VV L++ L
Sbjct: 317 TTNRQKYRLLGNSINVKVVGELIKLL 342
>gi|393247766|gb|EJD55273.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 344
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 139/393 (35%), Positives = 202/393 (51%), Gaps = 72/393 (18%)
Query: 14 RVLEFYSGIGGMRYSLMKADV-SAQVVEAF--DINDKANDVYELNFGHRPYQGNIQNLTA 70
R LEFY+GIGG+ +L + V ++V AF D + A Y H ++ +I L+A
Sbjct: 3 RALEFYAGIGGLSLALSRCTVRDVELVAAFEWDPSAAAVYAYNNAKRHPVHRTDISRLSA 62
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQ-KQSSDARAFSFLKIL-ELIPHTVKP---PHMLF 125
A L Y A +LLSPPCQPYT K +D RA SF ++ ++P K P +F
Sbjct: 63 AVLAAYNASVFLLSPPCQPYTVLSPDAKGDADPRASSFHHLMFSVLPDLAKQCSLPRFVF 122
Query: 126 VENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VENV GF+ S TH ++ E+LA+ +Y T+EF+LSPLQFG+P SR R++ LAK PL F
Sbjct: 123 VENVAGFKDSVTHRQLHEMLASLNYSTREFLLSPLQFGIPNSRKRFYLLAKLGPLEFAL- 181
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
PS V + P D+ + L S + + RFL DQ TET
Sbjct: 182 --------PPS---------VFVEWTDPRDTNEPL--SSESLARFL------DQGTTET- 215
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
+ C+ VP ++ +W DIV P ++R CCFT+
Sbjct: 216 ---------------------NECI------VPDKVLLKWAHEFDIVLPSAQRTCCFTRG 248
Query: 306 YYRYVKGTGSLL---ATVQPKNKGKASS-LKEQHLRYFTPREVANLHSF--PGD----FQ 355
Y +G+GS+L A ++ + +A + L+ LRYFTP E+ + F P + F
Sbjct: 249 YTHLAQGSGSVLQENADLEARLTDEAVAILRPLRLRYFTPTELLRIFCFLPPSESQIPFS 308
Query: 356 FPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
+P ++S + +Y LLGNS+++ VV LL YLF +
Sbjct: 309 WPANISRKTKYKLLGNSVNVLVVRHLLDYLFTE 341
>gi|119606625|gb|EAW86219.1| hCG23994, isoform CRA_c [Homo sapiens]
gi|167887562|gb|ACA05986.1| tRNA aspartic acid methyltransferase 1 variant 1 [Homo sapiens]
Length = 345
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/399 (33%), Positives = 197/399 (49%), Gaps = 79/399 (19%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF H + I+ +T
Sbjct: 2 EPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D L+SPPCQP+TR L
Sbjct: 62 LEEFDRLSFDMILMSPPCQPFTRDLL---------------------------------- 87
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ-- 185
I+ + N + QEF+LSP G+P SR RYF +AK +PL F+
Sbjct: 88 ------------IQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQ 135
Query: 186 -LLNNQLLRSPSPLLGNDDM--TVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQV 240
L+ + S P D+ + K+ +P+ S+D ++ D + LE + +
Sbjct: 136 VLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRK 195
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
N + LS + DF ++ ++ +L+P + R+ +DIV P +R
Sbjct: 196 NQQDSDLSV--KMLKDF--------LEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSV 245
Query: 301 CFTKSYYRYVKGTGSLLAT---VQPKNKGKAS---SLKEQ-------HLRYFTPREVANL 347
CFTK Y Y++GTGS+L T VQ +N K+ S +EQ LRYFTP+E+ANL
Sbjct: 246 CFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANL 305
Query: 348 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
FP +F FP ++++QRY LLGNSL++ VVA L++ L+
Sbjct: 306 LGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILY 344
>gi|198475758|ref|XP_001357145.2| Mt2 [Drosophila pseudoobscura pseudoobscura]
gi|198137946|gb|EAL34212.2| Mt2 [Drosophila pseudoobscura pseudoobscura]
Length = 347
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 182/383 (47%), Gaps = 47/383 (12%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
+RVLE +SGIGGM Y+ A + +V A D+N AN VY NIQ+L+
Sbjct: 2 GFRVLELFSGIGGMHYAFKYAQLDGNIVAAMDVNTVANAVYNFALNCHVKTRNIQSLSEK 61
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
E+ GA L+SPPCQP+TRQGLQ+ + D R+ + + LIP ++L +ENV G
Sbjct: 62 EVSKLGATMLLMSPPCQPHTRQGLQRDTEDKRSDALTHLCTLIPQCETLQYIL-MENVKG 120
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR-KPLSFRCQLLNNQ 190
FE S + +E L + + +EFIL+P QF VP +R RY+C+A++ K +F + +
Sbjct: 121 FECSQARNQFVEALEKAGFYWREFILTPTQFNVPNTRYRYYCIARKTKDFAFAGGKIWEE 180
Query: 191 LLRSPSPLLGNDDMTVITKHD------QPDDSWDKLLESCDPVERFLEFSNSGDQVNTET 244
+ SPS ++ I + + PDD K + D + N
Sbjct: 181 MPESPSTEQSVSQISAILEDNVSCEYLVPDDVLTKRVLVMDIIH---------PTQNRSM 231
Query: 245 GFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTK 304
F T + G+A PLS E S R K
Sbjct: 232 CFTKGYTHYTEGTGSA---------------FTPLSKEE------------SHRIFELVK 264
Query: 305 SYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQ 364
+ T S V+ + + L++ LRYFTPREVA L SFP +F FP + RQ
Sbjct: 265 EIDNNNQDTSSSSEDVRQR---RLDLLRQIKLRYFTPREVARLMSFPEEFAFPPETTNRQ 321
Query: 365 RYALLGNSLSIAVVAPLLQYLFA 387
+Y LLGNS+++ VV L++ L A
Sbjct: 322 KYRLLGNSINVKVVGELIKLLIA 344
>gi|393218987|gb|EJD04475.1| S-adenosyl-L-methionine-dependent methyltransferase [Fomitiporia
mediterranea MF3/22]
Length = 348
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 134/402 (33%), Positives = 185/402 (46%), Gaps = 93/402 (23%)
Query: 14 RVLEFYSGIGG-MRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAA 71
R LEFYSGIGG + +L ++V A VV A+D + + VYE N+G + +I LTA
Sbjct: 4 RTLEFYSGIGGGLHRALELSNVDASVVRAYDWDQTSCRVYEANYGPGIVRKVDISTLTAL 63
Query: 72 ELDMYGAHAWLLSPPCQPYT-RQGLQKQSSDARAFSFLKILE-LIPHTVKP---PHMLFV 126
+L A WLLSP CQPYT K S D RA SFL +++ +IP + P + V
Sbjct: 64 DLASENAPLWLLSPSCQPYTVLNPSAKGSQDPRAKSFLHLVQQVIPELARIDQCPKWILV 123
Query: 127 ENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
ENV GFE S T ++E L +Y T E +L+PLQFG+P SR RY+ LAK+ P SF
Sbjct: 124 ENVAGFEASSTRKILLETLHACNYTTVELLLTPLQFGIPNSRLRYYLLAKQLPSSF---- 179
Query: 187 LNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 246
+D P+D C+ + + D ET
Sbjct: 180 ----------------------ANDTPED--------CETTQLRAYLDRAADSAEDETSS 209
Query: 247 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 306
VP ++ RWG DIV P S+R CCFT+ Y
Sbjct: 210 ------------------------------VPDRVLLRWGRLFDIVLPSSRRSCCFTRGY 239
Query: 307 YRYVKGTGSLLATVQ---------PKNKGKASSLKEQ-HLRYFTPREVANLHSFPGD--- 353
+ V+ GS+L + P N+ ++ E LRYFTP E+ L F
Sbjct: 240 TQLVERAGSILQMNEYLDVSPQFSPANRRILLNILEPLRLRYFTPSELLRLFHFESSTDA 299
Query: 354 ---------FQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
F +P ++S + +Y LLGNS+++ VV L+ YLF
Sbjct: 300 GIRGNKTRAFVWPENVSRKSQYRLLGNSVNVEVVRRLVNYLF 341
>gi|112818953|gb|ABI23560.1| DNA methyltransferase 2 [Artemia franciscana]
Length = 379
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/386 (32%), Positives = 194/386 (50%), Gaps = 44/386 (11%)
Query: 11 EAWRVLEFYSGIGGMRYSLM-KADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNL 68
E +VLE ++G+GG+ ++ + D + QVV++F+IN A Y+ NFGH NI +L
Sbjct: 2 EYIQVLELFAGLGGLHIAVNNQKDANIQVVKSFEINVNAVKTYQENFGHDVVSNRNILSL 61
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
+ EL +A +SPPCQP+TR G + +D R +F +L+L+P + ++L +EN
Sbjct: 62 STEELFRQNVNAIFMSPPCQPFTRLGKKLDVNDDRCNAFHHVLKLLPRSPNIQYLL-IEN 120
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 188
V GFE+S M+EIL + + T EF+LSP FGVP SR RY+ LA++ C+
Sbjct: 121 VYGFESSKMRDTMLEILQSCGFYTIEFLLSPTDFGVPNSRLRYYLLARKNKKFTFCK--- 177
Query: 189 NQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFL- 247
D T I K K L + SN +VNT L
Sbjct: 178 -------------HDHTSIVKEFPYCTCRVKSLNDQASI-----CSNCQREVNTNISSLV 219
Query: 248 --STGTAAVDDF-GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTK 304
+ G AA + + +D+ I+ + VP ++ R+G+ +D+ CCFTK
Sbjct: 220 QQNAGNAAQNSLVNPGKLHSYLDKETDIEQYAVPDKILLRYGNILDLRTFQDSSSCCFTK 279
Query: 305 SYYRYVKGTGSLL-----ATVQPKNK-----------GKASSLKEQHLRYFTPREVANLH 348
Y V+G+GS+L T++ K SL++ +RYFTP+EV +
Sbjct: 280 GYTHLVEGSGSVLVCSRSVTIEEAYKVYNEFKDTDSEAALKSLRKLKIRYFTPKEVERIM 339
Query: 349 SFPGDFQFPHHLSLRQRYALLGNSLS 374
FP ++ +P +S + +Y LLGNS++
Sbjct: 340 CFPDNYTWPKDISDKTKYKLLGNSVN 365
>gi|195160038|ref|XP_002020883.1| GL16217 [Drosophila persimilis]
gi|194117833|gb|EDW39876.1| GL16217 [Drosophila persimilis]
Length = 347
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 182/383 (47%), Gaps = 47/383 (12%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
+RVLE +SGIGGM Y+ A + +V A D+N AN VY NIQ+L+
Sbjct: 2 GFRVLELFSGIGGMHYAFKYAQLDGNIVAAMDVNTVANAVYNFALNCHVKTRNIQSLSEK 61
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
E+ GA L+SPPCQP+TRQGLQ+ + D R+ + + LIP ++L +ENV G
Sbjct: 62 EVSKLGATMLLMSPPCQPHTRQGLQRDTEDKRSDALTHLCTLIPQCETLQYIL-MENVKG 120
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR-KPLSFRCQLLNNQ 190
FE S + +E L + + +EFIL+P QF VP +R RY+C+A++ + +F + +
Sbjct: 121 FECSQARNQFVEALEKAGFYWREFILTPTQFNVPNTRYRYYCIARKTEDFAFAGGKIWEE 180
Query: 191 LLRSPSPLLGNDDMTVITKHD------QPDDSWDKLLESCDPVERFLEFSNSGDQVNTET 244
+ SPS ++ I + + PDD K + D + N
Sbjct: 181 MPESPSTEQSVSQISAILEDNVSCEYLVPDDVLTKRVLVMDIIH---------PTQNRSM 231
Query: 245 GFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTK 304
F T + G+A PLS E S R K
Sbjct: 232 CFTKGYTHYTEGTGSA---------------FTPLSKEE------------SHRIFELVK 264
Query: 305 SYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQ 364
+ T S V+ + + L++ LRYFTPREVA L SFP +F FP + RQ
Sbjct: 265 EMDNNNQDTSSSSEDVRQR---RLDLLRQIKLRYFTPREVARLMSFPEEFAFPPETTNRQ 321
Query: 365 RYALLGNSLSIAVVAPLLQYLFA 387
+Y LLGNS+++ VV L++ L A
Sbjct: 322 KYRLLGNSINVKVVGELIKLLIA 344
>gi|157112484|ref|XP_001657555.1| DNA (cytosine-5)-methyltransferase [Aedes aegypti]
gi|108878059|gb|EAT42284.1| AAEL006166-PA [Aedes aegypti]
Length = 344
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 179/386 (46%), Gaps = 77/386 (19%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-HRPYQGNIQNLTAA 71
++VLE +SGIGGM +++ ++ +VV A DIN AN +Y NFG ++ NI +LT
Sbjct: 15 YQVLELFSGIGGMHFAIERSGKRYKVVSAIDINPVANAIYNHNFGANKASNSNILSLTPD 74
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ G + L+SPPCQP++R G K D RA F+ + +L+ + + +ENV G
Sbjct: 75 RIQKLGVNVILMSPPCQPFSRNGNFKDVDDRRADPFVHLCDLL-DKIPTVQFILLENVKG 133
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQL 191
FE S L+ + + +E+ILSP FGVP +R RY+C+AKR
Sbjct: 134 FERSQACELYKTRLSAAGFRFKEYILSPHDFGVPNTRHRYYCVAKRT------------- 180
Query: 192 LRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGT 251
EF N D++ ++ GT
Sbjct: 181 ----------------------------------------EFRNPSDEIVSKPTLQHVGT 200
Query: 252 AA-VDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 310
A + D E ++ +L+ L+ + + MDI PDS CFTK+Y Y
Sbjct: 201 AKRICDLVEPESE-------KLNRYLLKDDLLRKRLAIMDICTPDSTNSMCFTKAYTHYA 253
Query: 311 KGTGSLLATVQ--------------PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQF 356
+GTGS+ + + + K L+ +RYFTP EVA L FP DF+F
Sbjct: 254 EGTGSVYSPLMRSEFDAIYKQIETTDDDDEKLKLLRSLRVRYFTPAEVAKLMCFPDDFEF 313
Query: 357 PHHLSLRQRYALLGNSLSIAVVAPLL 382
P + +Q Y +LGNS+++ VV+ L
Sbjct: 314 PKQTTDKQCYRVLGNSINVLVVSSLF 339
>gi|326428358|gb|EGD73928.1| hypothetical protein PTSG_05624 [Salpingoeca sp. ATCC 50818]
Length = 512
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/307 (38%), Positives = 157/307 (51%), Gaps = 26/307 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLTAAE 72
RVLEFYSGIGGM +L AD +A+V+ AFDIND AN VY NF P +Q I+++
Sbjct: 19 RVLEFYSGIGGMHAALKVADPTARVLRAFDINDTANKVYRHNFPETPVWQRLIESIPRER 78
Query: 73 LD-MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ A +L+SPPCQP+TR G Q+ D R+ S IL+LI PP + VENV G
Sbjct: 79 FEGKLQADMYLMSPPCQPFTRTGKQQGIEDKRSTSLRFILDLITTMKTPPRYILVENVKG 138
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQL 191
FE+S+ +I L + DY QEFILSP QFG+P SR RYF +A R PL
Sbjct: 139 FESSNARQPLISALQSRDYSFQEFILSPDQFGIPNSRLRYFLVAVRAPLQL--------- 189
Query: 192 LRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFS-NSGDQVNTETGFLSTG 250
PSP G + T D + + + FL + V +
Sbjct: 190 ---PSPPTGTVLYHIPTLGGAFADGYSPQIAA----HSFLPPAPQQVPGVPPVRPWTLRP 242
Query: 251 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 310
AV + +A+E I LVP+ ++ R G DIV S R CFTK+Y Y
Sbjct: 243 VRAVGAYLSADEG-------EIAANLVPMKVVLRHGQLFDIVDATSHRTMCFTKAYSHYA 295
Query: 311 KGTGSLL 317
+GTGS++
Sbjct: 296 EGTGSVV 302
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 328 ASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
+ +L LR+FTPRE+ +H F + P ++ +Q +GN L++ VVA L++++ A
Sbjct: 448 SEALGALRLRWFTPREMLTIHGFADTYTVPADVTAKQMRRCIGNGLNVVVVAELIKFMLA 507
>gi|339776691|gb|AEK05285.1| DNA-methyltransferase 2 isoform 2 [Schistosoma mansoni]
Length = 360
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 198/401 (49%), Gaps = 70/401 (17%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-PYQGNIQNLTAAE 72
RVLE YSGIGGM + ++ V +VV A +IN A DVY+ NF + I++ +
Sbjct: 2 RVLELYSGIGGMHIAFKESTVKHEVVAAVEINGVATDVYKYNFPNTLTLNRVIESFSPDY 61
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
+ A+ W L PPCQP+TR G + +D R+ SF +L+LI ++ P + +ENV GF
Sbjct: 62 VCSLNANVWSLCPPCQPFTRLGKRMCEADNRSSSFFHVLDLI--SILKPAGIILENVKGF 119
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQL- 191
E S+ ++IE+L + DY +FG+P R R++ LA+ + S+ +
Sbjct: 120 EHSEPWRRLIEVLNSCDY--------EYRFGIPNCRLRFYLLARLRSSSWNSNFKMGKSE 171
Query: 192 ---LRSP--SPLLGNDDMT----VITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNT 242
LR P +P+L T VI+ + DD++ + ++ C P+ FL + +
Sbjct: 172 SIDLRPPIDAPMLPGCQCTSCSGVISHIEHTDDNFTEYIQFCRPISEFLLVPSDSSK--- 228
Query: 243 ETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCF 302
E FL ++C ++R+ +DIV K+ CF
Sbjct: 229 ELYFLD------------------EKC------------LQRYFRVLDIVRSCDKKTRCF 258
Query: 303 TKSYYRYVKGTGSLLAT-VQPKNKGKASSLKEQH---------------LRYFTPREVAN 346
TK Y + ++GTGS+ T ++ + K ++ E + LR+F REVAN
Sbjct: 259 TKGYSKRLEGTGSVFQTSMENETSEKITNFYEANKEDEQAVLQYAKLLKLRFFHSREVAN 318
Query: 347 LHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
+ FP F FP H++ +QR LLGNS++I VV+ L+ + F
Sbjct: 319 MMCFPKSFDFPEHITEKQRLRLLGNSVNILVVSHLIYWAFG 359
>gi|308805851|ref|XP_003080237.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri]
gi|116058697|emb|CAL54404.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri]
Length = 382
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/398 (31%), Positives = 184/398 (46%), Gaps = 69/398 (17%)
Query: 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
G+ + E YSGIG R +L V Q V A D +D AN VYE NFG P + NI++L
Sbjct: 32 GDPASLRELYSGIGATRLALEHL-VDLQDVVAIDNSDAANAVYEANFGDVPRRANIEHLD 90
Query: 70 AAEL--DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
A L +A SPPCQPYTR+GL S D RA SF +++ IP+ PP +FVE
Sbjct: 91 ANALFPSSERDYALTASPPCQPYTRRGLGLASEDPRAKSFHAVIDAIPNLSNPPRWVFVE 150
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 187
NV GFE+SDT +++ L+ DY +EFI+ P GVP +R RY+ +A R P F
Sbjct: 151 NVRGFESSDTRRALLDALSERDYDIREFIVDPTALGVPNTRERYYLIATRSPGGF----- 205
Query: 188 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFL 247
+P +W + G ++ F+
Sbjct: 206 -----------------------SEPTPTWLR-----------------GRAIDAAGQFV 225
Query: 248 STGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYY 307
+ + + + + C + D ++ +I ++ +D+V P SKRC FT Y
Sbjct: 226 GEASTSQSTTSTLADYIRTE-CDNEDELVLGSEMIRKYWRVLDVVTPTSKRCSTFTSGYA 284
Query: 308 RYVKGTGSLLATVQPKNKG-----------KASSLKEQ-------HLRYFTPREVANLHS 349
V G GS+L + +G S + E+ +LR+F E+ LH
Sbjct: 285 DTVFG-GSVLLRSRGVQRGLDELLELDADSGVSRINERDVEHFIDNLRWFHVDEIKALHG 343
Query: 350 FPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
DF F + S ++ LLGNS+S+ VV +L +LF+
Sbjct: 344 VRDDFTF-NACSRKKAIFLLGNSISVHVVREVLLHLFS 380
>gi|414145788|pdb|4H0N|A Chain A, Crystal Structure Of Spodoptera Frugiperda Dnmt2
E260a/e261a/k263a Mutant
gi|414145789|pdb|4H0N|B Chain B, Crystal Structure Of Spodoptera Frugiperda Dnmt2
E260a/e261a/k263a Mutant
gi|414145790|pdb|4H0N|C Chain C, Crystal Structure Of Spodoptera Frugiperda Dnmt2
E260a/e261a/k263a Mutant
gi|414145791|pdb|4H0N|D Chain D, Crystal Structure Of Spodoptera Frugiperda Dnmt2
E260a/e261a/k263a Mutant
Length = 333
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 181/396 (45%), Gaps = 83/396 (20%)
Query: 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNL 68
G + ++LE YSGIGGM + ++ + ++V A DIN AN VY+ NF NIQ L
Sbjct: 1 GMSHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQL 60
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
T + + L+SPPCQP+TR G +D R SFL ++ ++ ++L +EN
Sbjct: 61 TPQVIKKWNVDTILMSPPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNVDYIL-MEN 119
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 188
V GFE S I+ L +++ QEF+L P GVP SR L + C
Sbjct: 120 VKGFENSTVRNLFIDKLKECNFIYQEFLLCPSTVGVPNSR-----------LRYYCTARR 168
Query: 189 NQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLS 248
N L +W P +R D++ T
Sbjct: 169 NNL------------------------TW--------PFKR-------RDEIITRLP--- 186
Query: 249 TGTAAVDDFG---AAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
DFG + E +E D + FLVP ++ R DI Y SKR CCFTK+
Sbjct: 187 ------KDFGVPHSLESIIEED---VDEKFLVPEKML-RCAKVFDICYKTSKRSCCFTKA 236
Query: 306 YYRYVKGTGSLL-------------ATVQPKNKGK--ASSLKEQHLRYFTPREVANLHSF 350
Y Y GTGS+ A Q + G+ KE LRYFTP+EV + F
Sbjct: 237 YTHYADGTGSIFTDKPREVVQKCYAAAAQNEIGGEKFVELFKELKLRYFTPKEVLMIMCF 296
Query: 351 PGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
P + P ++S++Q Y LLGNS+++ V++ LL+ LF
Sbjct: 297 PKSYNLPTNISMKQCYRLLGNSVNVKVISELLKILF 332
>gi|302673748|ref|XP_003026560.1| hypothetical protein SCHCODRAFT_62152 [Schizophyllum commune H4-8]
gi|300100243|gb|EFI91657.1| hypothetical protein SCHCODRAFT_62152 [Schizophyllum commune H4-8]
Length = 345
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 189/407 (46%), Gaps = 98/407 (24%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY------------ 61
R LEFYSGIGG+ +L ++ ++ QV AFD + A VY+ NF P
Sbjct: 4 RALEFYSGIGGLHLALERSKIAGQVACAFDWDQAAEQVYKHNFPATPVKRVRDMIPHAHR 63
Query: 62 ------QGNIQNLTAAEL-DMY-GAHAWLLSPPCQPYTRQGLQ-KQSSDARAFSFLKILE 112
Q +I LTA+ L D++ WLLSP CQPYT K + D RA SFL +++
Sbjct: 64 YTDLSTQVDISTLTASSLRDLFPDIDIWLLSPACQPYTVLNPNGKGAQDPRAQSFLHLVQ 123
Query: 113 LI-PHTVK---PPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSR 168
++ P + P L VENV GFE S T + IL + Y EF+L+PLQFG+P SR
Sbjct: 124 VVLPDLAREGAAPRYLLVENVAGFEQSTTRQLTLSILQSMGYHCAEFLLTPLQFGIPNSR 183
Query: 169 PRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVE 228
RY+ LA+ R P P + + +S V
Sbjct: 184 LRYYLLAR----------------RDPFPSISS--------------------KSAASVL 207
Query: 229 RFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSA 288
R++ SG ++ + +P ++ +WG
Sbjct: 208 RYIPGHGSGPWIDPPA-----------------------------KYTIPDKVLVKWGWL 238
Query: 289 MDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASS---LKEQHLRYFTPREVA 345
DIVYP +R CCFT+ Y + V+ GS+L + + + L+ LRYFTP+E+
Sbjct: 239 FDIVYPSDRRTCCFTRGYTKLVERAGSILQMNEDMDTNPTQALQILRPLRLRYFTPQELL 298
Query: 346 NLHSF--PG---DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
L F PG +++P+++S + +Y L+GNS++I VV L+ YL +
Sbjct: 299 CLFGFNDPGLQVAYKWPYNISEKTKYRLIGNSVNIHVVTNLVNYLVS 345
>gi|406868804|gb|AFS64716.1| DNA methyltransferase-2 [Spodoptera frugiperda]
Length = 332
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 182/393 (46%), Gaps = 85/393 (21%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLTAAE 72
++LE YSGIGGM + ++ + ++V A DIN AN VY+ NF NIQ LT
Sbjct: 4 KILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQV 63
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
+ + L+SPPCQP+TR G +D R SFL ++ ++ ++L +ENV GF
Sbjct: 64 IKKWNVDTILMSPPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNVDYIL-MENVKGF 122
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 192
E S I+ L +++ QEF+L P GVP SR L + C N L
Sbjct: 123 ENSTVRNLFIDKLKECNFIYQEFLLCPSTVGVPNSR-----------LRYYCTARRNNL- 170
Query: 193 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTA 252
+W P +R D++ T
Sbjct: 171 -----------------------TW--------PFKR-------RDEIITRLP------- 185
Query: 253 AVDDFG---AAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 309
DFG + E +E D + FLVP ++ R DI Y SKR CCFTK+Y Y
Sbjct: 186 --KDFGVPHSLESIIEED---VDEKFLVPEKML-RCAKVFDICYKTSKRSCCFTKAYTHY 239
Query: 310 VKGTGSLLATVQPKN-------KGKASSL---------KEQHLRYFTPREVANLHSFPGD 353
GTGS+ T +P+ + K + + KE LRYFTP+EV + FP
Sbjct: 240 ADGTGSIF-TDKPREVVQKCYEEAKQNEIGGEKFVELFKELKLRYFTPKEVLMIMCFPKS 298
Query: 354 FQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
+ P ++S++Q Y LLGNS+++ V++ LL+ LF
Sbjct: 299 YNLPTNISMKQCYRLLGNSVNVKVISELLKILF 331
>gi|112983066|ref|NP_001036934.1| DNA cytosine-5 methyltransferase [Bombyx mori]
gi|54888741|dbj|BAD67190.1| DNA cytosine-5 methyltransferase [Bombyx mori]
Length = 336
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 181/378 (47%), Gaps = 52/378 (13%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLTAAE 72
R+LE YSGIGGM + ++ + +VV A DIN ANDVY+ NF + NIQ+LT E
Sbjct: 8 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 67
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
++ Y L+SPPCQP+TR G +D R SFL ++++ + + +ENV GF
Sbjct: 68 IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDK-LNTLQYILMENVKGF 126
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 192
E S +E L ++ QEF+LSP+ GVP SR RY+C+AKR ++ + + +
Sbjct: 127 ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN-TWNFKRKDELIT 185
Query: 193 RSPSPLLGNDDMTVITKHDQPDDSW--DKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 250
P + I +++ PDD DK+L
Sbjct: 186 CLPKTFAKPHCLKDIIENNVPDDYLVPDKMLRK--------------------------- 218
Query: 251 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 310
A + D A+ + H+ +E GS FT++ Y V
Sbjct: 219 -ANIFDICYADSNRSCCFTKAYTHY------VEGTGSV-------------FTETSYDIV 258
Query: 311 KGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLG 370
+ L + + +LK+ LR+FT +E+ L SFP ++ FP ++ +Q Y LLG
Sbjct: 259 QKYLKLANYFEVGSDEFLQTLKKLKLRFFTSKEILQLMSFPSEYSFPKTVTRKQCYRLLG 318
Query: 371 NSLSIAVVAPLLQYLFAQ 388
NS+++ V++ LLQ LF +
Sbjct: 319 NSVNVKVISELLQILFDE 336
>gi|347971242|ref|XP_312975.5| AGAP004101-PA [Anopheles gambiae str. PEST]
gi|333468578|gb|EAA08679.5| AGAP004101-PA [Anopheles gambiae str. PEST]
Length = 339
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 186/391 (47%), Gaps = 74/391 (18%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-GNIQNLT 69
E RVLE +SGIGGMR +L +A ++V A D+N AN+VY+ NFG + GNI +LT
Sbjct: 7 EPHRVLELFSGIGGMRMALEEAGKEFEIVSAIDVNPIANEVYKHNFGAETVRNGNILSLT 66
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV--E 127
A ++ L+SPPCQP+TR G +D R+ FL I EL+ K P + F+ E
Sbjct: 67 AEKVTKLKVDTILMSPPCQPFTRNGKFNDINDRRSDPFLHICELLD---KMPLVEFILME 123
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 187
NV GFE S L + + Q++ILSP QFGVP +R RY+C+AKR F+ +
Sbjct: 124 NVKGFENSQACEMYKARLREAGFHYQQYILSPHQFGVPNTRHRYYCIAKRHGADFKWK-- 181
Query: 188 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWDK-------------LLESCDPVERFLEFS 234
+ +++ + G V T D D+ + L++ C P E +
Sbjct: 182 SEEIITTSQAGYGAKQTLVGTIVDTQQDALGQYGLKSATLLKHLPLMDVCTP-----EST 236
Query: 235 NSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYP 294
NS T + + GT +V PLS E
Sbjct: 237 NSMCFTKAYTHY-AEGTGSV---------------------YCPLSRQE----------- 263
Query: 295 DSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDF 354
F K+Y +L + K S L+E +RYFTP+EVA L SFP F
Sbjct: 264 -------FDKTY--------ALAMGAEEDEDRKLSVLRELRVRYFTPKEVARLMSFPEHF 308
Query: 355 QFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
FP ++ +QRY +LGNS+++ VV+ LL L
Sbjct: 309 SFPDTVTNKQRYRVLGNSINVFVVSVLLHEL 339
>gi|357620806|gb|EHJ72855.1| DNA cytosine-5 methyltransferase [Danaus plexippus]
Length = 318
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 179/371 (48%), Gaps = 77/371 (20%)
Query: 32 ADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLTAAELDMYGAHAWLLSPPCQPY 90
++++ +VV A DIN AN+VY+ NF + P NIQ+L+ ++ + L+SPPCQP+
Sbjct: 8 SELNGEVVTAVDINTVANEVYKHNFPNTPLITKNIQSLSYEDIKKMNVNTILMSPPCQPF 67
Query: 91 TRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDY 150
TR G +D R SF +++L ++L +ENV GFE S I L ++
Sbjct: 68 TRNGKFLDENDPRTNSFTYLIDLFDELDNIEYIL-MENVKGFECSTVRNLFINKLKKCNF 126
Query: 151 LTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKH 210
+ QEF+L P GVP SR RY+C+A++ L + S + ++ +T +TK
Sbjct: 127 VYQEFLLCPTSVGVPNSRLRYYCIARKNTLDW-------------SFIRTDEIITKLTKD 173
Query: 211 DQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCV 270
+ + +LE+ P E++L +N FL
Sbjct: 174 YGEPHTLEAILETNVP-EKYLLTNN----------FL----------------------- 199
Query: 271 SIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQP-------K 323
+ +DI Y SKR CCFTKSY YV+GTGS+ P K
Sbjct: 200 -------------KRAYLLDICYKHSKRSCCFTKSYTHYVEGTGSVYTDSTPDEVENCIK 246
Query: 324 NKGKASSLKEQH--------LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSI 375
+ + KE++ LR+FTP+EV L FP ++FP + +Q Y LLGNS+++
Sbjct: 247 DAKQYEVGKEEYVDRFQQLKLRFFTPKEVLALMMFPKSYKFPERTTTKQCYRLLGNSVNV 306
Query: 376 AVVAPLLQYLF 386
V++ LL+ LF
Sbjct: 307 KVISELLKILF 317
>gi|313244000|emb|CBY14873.1| unnamed protein product [Oikopleura dioica]
Length = 552
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 187/383 (48%), Gaps = 68/383 (17%)
Query: 37 QVVEAFDINDKANDVYELNFGHRPYQGNIQN--LTAAELDMYGAHAWL-LSPPCQPYTRQ 93
QV+ A DIN+ A Y+LN H + ++ N + AA + + L +SPPCQP+TR
Sbjct: 179 QVLSAMDINNNATSCYKLN--HMSMEKDVINTDINAAPWEQTSGYNTLAMSPPCQPFTRN 236
Query: 94 GLQKQSSDARAFSFLKILELIPHTVKP--PHMLFVENVVGFETSDTHAKMIEILANSDYL 151
G QK D R L I+E I T K P + +ENV FE S+T + L + +++
Sbjct: 237 GKQKDKEDPRTKPLLSIIEKIKTTKKKFLPRYIIMENVKFFEKSETCKDFLAALDSRNFI 296
Query: 152 TQEFILSPLQFGVPYSRPRYFCLAKR----------------------KPLSFRCQLLNN 189
++F++SP G P R RYF +AKR +P + + +L
Sbjct: 297 YRQFLISPTDLGTPNQRSRYFLIAKRGKHMKFHFDPYVINWKKKSAAKEPKNKKQKLDAR 356
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPDDSWD----KLLESCDPVERFLEFSNSGDQVNTETG 245
++ ++ + D+M V +HD PD + K+ E +ER+++ + ++V E
Sbjct: 357 EIPKANVKMY--DNMDVFVRHDGPDANSQILGLKIKEKIHSLERYIQDLDFKEEVWNEIY 414
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
L+ L R+ + +DIV S R CFTK+
Sbjct: 415 VLTD------------------------------QLKRRFLNVLDIVRTSSSRSICFTKA 444
Query: 306 YYRYVKGTGSL---LATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSL 362
Y +Y +GTGS+ + V+P ++ K ++ LRYFT EVA L FP DF FP L+
Sbjct: 445 YGKYAQGTGSMIDMMEKVEPSDRTKDREPEDFELRYFTEMEVAGLMGFPKDFSFPPDLTT 504
Query: 363 RQRYALLGNSLSIAVVAPLLQYL 385
RQRYALLGNSL++ VVA L++ +
Sbjct: 505 RQRYALLGNSLNVDVVAVLIKLM 527
>gi|392572088|gb|EIW65260.1| S-adenosyl-L-methionine-dependent methyltransferase [Trametes
versicolor FP-101664 SS1]
Length = 368
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 190/403 (47%), Gaps = 69/403 (17%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAAE 72
+ LEFYSGIGG+ +L ++ VV A+D + A VY N+G + Q +I +L A +
Sbjct: 4 KALEFYSGIGGLHRALAQSAARGNVVRAYDWDQAACRVYAANYGPKAVQKVDISSLEATD 63
Query: 73 LDMYGAHAWLLSPPCQPYT-RQGLQKQSSDARAFSFLKILE-LIPHTV---KPPHMLFVE 127
L A WLLSP CQPYT L K + D RA SF++++E ++P V K P L VE
Sbjct: 64 LAELDADLWLLSPSCQPYTVLNPLAKGAEDPRAKSFIRLMESVLPELVRLRKHPQKLLVE 123
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 187
NV GFE+S T +++ L Y T E +L+PLQFG+P SR RY+ LAK P F
Sbjct: 124 NVAGFESSSTRERLVANLRTLGYTTLELLLTPLQFGIPNSRLRYYLLAKFSPSEF----- 178
Query: 188 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFL 247
+ +Q D W + D V+T T
Sbjct: 179 -------------------VGASEQEDRVWRHIP------------GRGTDWVDTRT--- 204
Query: 248 STGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYY 307
+G A ++ + V +P ++E+WG DIV P ++R CCFT+ Y
Sbjct: 205 LSGEEAPGAVTEVRNYLDEESSVEPHPHAIPEKVLEKWGRLFDIVLPSARRTCCFTRGYT 264
Query: 308 RYVKGTGSLLAT-------------VQPKNKGKASSL---KEQHLRYFTPREVANLHSF- 350
+ V+ GS+L + + G +++ + LRY +P E+ L F
Sbjct: 265 KLVERAGSVLQMNEDLDTTRTFDTFLDAQRAGDDNAVRLLRPLRLRYLSPTELLRLFEFL 324
Query: 351 --PGD-----FQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
P F +P ++ + +Y LLGNS+++ VV L+ YLF
Sbjct: 325 PPPSTDSASFFAWPDQITTKTKYKLLGNSVNVRVVTQLINYLF 367
>gi|219129968|ref|XP_002185148.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403327|gb|EEC43280.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 376
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 123/405 (30%), Positives = 195/405 (48%), Gaps = 62/405 (15%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVV-----------EAFDINDKANDVYELNFG 57
D R +EF++G+GG +L +A Q+V A D +D +V+E N
Sbjct: 3 DTAPLRYVEFFAGVGGWTMALQEA---IQIVYPSDPPELFCSAALDHSDLCIEVFEHNHS 59
Query: 58 HRPYQG-NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQK----QSSDARAFSFLKILE 112
+ I+ LT ++ Y A W++SPPCQP+TRQ + + +R+F L L
Sbjct: 60 LVIQKAVRIEKLTMNQIFEYRADIWMMSPPCQPHTRQHSNQDQELEDPRSRSFLHLCDLL 119
Query: 113 LIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYF 172
L + P ++F+ENVVGFE+S + K IL + Y+ + F L+P Q GVP RPRYF
Sbjct: 120 LELPSENLPKLIFLENVVGFESSQSCRKWNTILQSRQYIIKHFHLNPTQVGVPNDRPRYF 179
Query: 173 CLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLE 232
CLA R + Q + + D+ IT PD + L
Sbjct: 180 CLAVRSTEIHDSNDNDLQFHVHAKTKMADSDLRPIT----PDTNLPNL--------NIKG 227
Query: 233 FSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGS-AMDI 291
+S +V++ FL D ++T +P S+++R + DI
Sbjct: 228 LRDSTVKVSSVAEFLDK------DLTEHQKT----------SLRIPQSILQRNAAWCFDI 271
Query: 292 VYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKE--------------QHLR 337
V P+S R CFT SY ++VKGTGS+L T +++ + ++ ++ +HLR
Sbjct: 272 VTPESLRSACFTSSYGKFVKGTGSVLYTGPYRDRIRLTNPEDRKFDDAWDQGLDLPKHLR 331
Query: 338 YFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLL 382
YF+ E+A + FP F FP ++ +Q++ L+GNSL++ V A L+
Sbjct: 332 YFSGSELARIFGFPSTFSFPETITRKQQWKLIGNSLNVRVAAKLV 376
>gi|145348417|ref|XP_001418645.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578875|gb|ABO96938.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 398
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 177/404 (43%), Gaps = 81/404 (20%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
R++E YSGIG R +L + V+ + A D +D AN VYE NF P + N+++L L
Sbjct: 42 RLVELYSGIGATRLAL-EPLVTLKSAIAVDNSDAANAVYEANFADAPRRVNVEHLDLNAL 100
Query: 74 DMYGA-----------HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH 122
G + +SPPCQPYTR+G S D RA SF +++ + P
Sbjct: 101 FASGNGDEGRQGRRNDYVLTVSPPCQPYTRRGKGLASEDPRARSFHAVIDQLRAIEHVPR 160
Query: 123 MLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
+FVENVVGFE+SDT ++ L + Y +EFI+SP+ G+PYSR RY+ +A + F
Sbjct: 161 RIFVENVVGFESSDTRRALLNALGSRRYDVREFIVSPMALGIPYSRSRYYLIATLREGGF 220
Query: 183 RCQLLNNQLLRSPSPLLG---NDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQ 239
R +P+ L G NDD +V+T Q S L
Sbjct: 221 RAP--------TPAWLAGRELNDDGSVVTSDAQSSPSSSATL------------------ 254
Query: 240 VNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRC 299
E + D +D L P I+++ +D+V+ S+RC
Sbjct: 255 ---------------------SEYIVADADGRVDLLLSP-DTIKKYRRMLDVVHAKSRRC 292
Query: 300 CCFTKSYYRYVKGTGSLLA----------TVQPKNKGKASSLKEQ-------HLRYFTPR 342
FT Y V G +L V + + E+ LR+F
Sbjct: 293 STFTSGYGSTVFGGSVVLRGGNDELVSMLEVDVNETSGVARISERDIERFVGELRWFAVE 352
Query: 343 EVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
E+ LH DF F S ++ LLGNS+S+ VV +L++L
Sbjct: 353 EIKRLHGVRRDFTF-DACSTKKAIFLLGNSISVDVVREVLRHLI 395
>gi|307210936|gb|EFN87251.1| tRNA (cytosine-5-)-methyltransferase [Harpegnathos saltator]
Length = 238
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 109/171 (63%), Gaps = 2/171 (1%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAA 71
+VLE YSGIGGM ++L+++ + A+VV A DIN ANDVY NF NIQ+++A
Sbjct: 1 MKVLELYSGIGGMHFALLESGIPAKVVAAIDINPVANDVYRHNFPETVLMNRNIQSISAQ 60
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
L+ A L+SPPCQP+TR GLQ+ D+RA S L +L LIP +K + +ENV G
Sbjct: 61 TLNKLDVDAILMSPPCQPFTRLGLQRDILDSRACSLLHVLSLIPK-LKNLKYILLENVQG 119
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
FE S K+++ L Y +E +LSP QFG+P SR RY+ LAKRK L F
Sbjct: 120 FEVSQMRNKLVDCLEECGYAYRELMLSPSQFGIPNSRRRYYLLAKRKDLKF 170
>gi|403411631|emb|CCL98331.1| predicted protein [Fibroporia radiculosa]
Length = 339
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 171/356 (48%), Gaps = 73/356 (20%)
Query: 68 LTAAELDMYGAHAWLLSPPCQPYT-RQGLQKQSSDARAFSFLKILE-LIPHTVKP---PH 122
L AA L Y A WLLSP CQPYT L K ++D RA SF+ ++E ++P V+ P
Sbjct: 2 LNAANLATYRAELWLLSPSCQPYTVLNPLAKGAADPRAKSFIHLIEDVLPEMVRDSTHPK 61
Query: 123 MLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
+ VENV GFE S T ++++ L + Y E +L+PLQFG+P SR RY+ LAK +P+ F
Sbjct: 62 YMLVENVAGFERSSTRLRLLKTLDSLGYGVLELLLTPLQFGIPNSRLRYYLLAKAQPMPF 121
Query: 183 RCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNT 242
+ + L P G D W DP R N + +
Sbjct: 122 PGTIASGLRLWRHIPGHGQD--------------W------IDP--RMYIDHNDNEMIAD 159
Query: 243 ETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFL----VPLSLIERWGSAMDIVYPDSKR 298
E + D+ +D V H +P +++WG DI+ P ++R
Sbjct: 160 E----------IRDY--------LDEDVPERHSTHPNAIPDQTLQKWGRLFDIILPSARR 201
Query: 299 CCCFTKSYYRYVKGTGSLLAT-------------VQPKNKGKASSLK---EQHLRYFTPR 342
CCFT+ Y R + +GS+L ++ + G+ ++++ LRYF+P
Sbjct: 202 SCCFTRGYVRMAERSGSVLQMNEELDTTSTFDRFLEAQKSGREAAVRVLDPLRLRYFSPT 261
Query: 343 EVANL-HSFPG-------DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQAG 390
E+ + H P FQ+P LS++ +Y L+GNS+++ VVA L++YLF G
Sbjct: 262 ELLRIFHFLPTAKTEAQESFQWPADLSVKTQYRLIGNSVNVQVVAELIRYLFEVEG 317
>gi|390603836|gb|EIN13227.1| S-adenosyl-L-methionine-dependent methyltransferase [Punctularia
strigosozonata HHB-11173 SS5]
Length = 346
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 171/372 (45%), Gaps = 81/372 (21%)
Query: 62 QGNIQNLTAAEL---DMYGAHAWLLSPPCQPYT-RQGLQKQSSDARAFSFL----KILEL 113
+ +I LTA +L D H WLLSP CQPYT K + D RA SFL ++L
Sbjct: 4 KTDISTLTADDLRNIDGQRIHLWLLSPACQPYTVLNPSAKGAQDPRAQSFLHLVTRVLPQ 63
Query: 114 IPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFC 173
+ P L VENV GFE+S T +++ L N Y T+E +L+PLQFGVP SR RY+
Sbjct: 64 LAERNDHPRCLLVENVAGFESSSTRTTLVDTLRNLGYETRELLLTPLQFGVPNSRLRYYL 123
Query: 174 LAKRKPLSFRCQLLNNQLLRSPSPLLGND--DMTVITKHDQPDDSWDKLLESCDPVERFL 231
LAK + S Q+ ++ + P LG D D I +++ P L P E
Sbjct: 124 LAKLRTTSPPPQITDHSAVLRHIPGLGEDWVDPRSIDQNNGP-------LGEAQPAE--- 173
Query: 232 EFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDI 291
G +V+ +L+T ++ +P ++++WG DI
Sbjct: 174 -----GSKVHALCRYLNTD--------------------GMEACTIPDRVLQKWGRLFDI 208
Query: 292 VYPDSKRCCCFTKSYYRYVKGTGSLLAT-------------VQPKNKGKASS---LKEQH 335
V P S R CCFT+ Y + V+ GS+L + + G + L
Sbjct: 209 VLPSSTRSCCFTRGYTQLVESAGSILQMNETLDTTAIFDEFLSAQENGDPDAVRILNSLR 268
Query: 336 LRYFTPREVANLHSF--------------------PGDFQFPHHLSLRQRYALLGNSLSI 375
LRYF P E+ L F DF++P LS++ +Y L+GNS++I
Sbjct: 269 LRYFHPDELLRLFGFRRPVPMMEGEKNNGSAGVEDAEDFRWPVDLSMKTKYRLIGNSINI 328
Query: 376 AVVAPLLQYLFA 387
VV+ L++YLF+
Sbjct: 329 VVVSELIRYLFS 340
>gi|297720201|ref|NP_001172462.1| Os01g0612000 [Oryza sativa Japonica Group]
gi|255673459|dbj|BAH91192.1| Os01g0612000, partial [Oryza sativa Japonica Group]
Length = 148
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/105 (71%), Positives = 85/105 (80%), Gaps = 5/105 (4%)
Query: 290 DIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ-----PKNKGKASSLKEQHLRYFTPREV 344
DIV P+SKRCCCFTKSYYRYVKGTGSLLAT K + SSLKE LR+FTPREV
Sbjct: 44 DIVCPESKRCCCFTKSYYRYVKGTGSLLATSNNLKRISKEDLEISSLKELGLRFFTPREV 103
Query: 345 ANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQA 389
ANLHSFP F FP+H+SLRQ+YA+LGNSLS+AVV PLL+YLFA+
Sbjct: 104 ANLHSFPSSFHFPNHISLRQQYAMLGNSLSVAVVGPLLRYLFAET 148
>gi|405958955|gb|EKC25033.1| tRNA (cytosine-5-)-methyltransferase [Crassostrea gigas]
Length = 373
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 106/171 (61%), Gaps = 1/171 (0%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAA 71
RVLE YSGIGGM ++ + +S +++ A D+N AN +Y+ NF I++L+A
Sbjct: 1 MRVLELYSGIGGMHCAVKECGISYEIIAAIDVNTTANKIYKHNFPESNLMDCGIESLSAT 60
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+LD ++SPPCQP+TR G + + D R SF+ +L L+P P + VENV G
Sbjct: 61 QLDEMKIDMIVMSPPCQPFTRVGKKLDAEDIRTKSFIHLLSLLPRLNNCPKYILVENVKG 120
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
FE S+T K+ E L ++ QEF+L+PLQFG+P SR RY+ +AKR PL F
Sbjct: 121 FEDSETCLKLRETLMKCNFTYQEFLLTPLQFGIPNSRLRYYLIAKRSPLKF 171
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 288 AMDIVYPDSKRCCCFTKSYYRYVKGTGSLLA--------------TVQPKNKGKASS--- 330
MDIV+P ++ CFTK Y +++G GS+ T++ KN+ + S
Sbjct: 247 VMDIVFPCLQKTTCFTKRYGHFMEGAGSIFQMSHSISVTSELKDRTLELKNRDQWSDEDY 306
Query: 331 --LKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
L LRYFTPRE+AN FP + FP LS Q Y LGNSL++ VV+ L+Q + +
Sbjct: 307 QVLSRLRLRYFTPREIANFLCFPATYNFPQDLSKIQLYRTLGNSLNVRVVSKLIQLMVKE 366
>gi|353231993|emb|CCD79348.1| putative dna (cytosine-5)-methyltransferase [Schistosoma mansoni]
Length = 293
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 162/317 (51%), Gaps = 46/317 (14%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-PYQGNIQNLTAAE 72
RVLE YSGIGGM + ++ V +VV A +IN A DVY+ NF + I++ +
Sbjct: 2 RVLELYSGIGGMHIAFKESTVKHEVVAAVEINGVATDVYKYNFPNTLTLNRVIESFSPDY 61
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
+ A+ W L PPCQP+TR G + +D R+ SF +L+LI ++ P + +ENV GF
Sbjct: 62 VCSLNANVWSLCPPCQPFTRLGKRMCEADNRSSSFFHVLDLI--SILKPAGIILENVKGF 119
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQL- 191
E S+ ++IE+L + DY ++F+LSPLQFG+P R R++ LA+ + S+ +
Sbjct: 120 EHSEPWRRLIEVLNSCDYEYRQFLLSPLQFGIPNCRLRFYLLARLRSSSWNSNFKMGKSE 179
Query: 192 ---LRSP--SPLLGNDDMT----VITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNT 242
LR P +P+L T VI+ + DD++ + ++ C P+ FL + +
Sbjct: 180 SIDLRPPIDAPMLPGCQCTSCSGVISHIEHTDDNFTEYIQFCRPISEFLLVPSDSSK--- 236
Query: 243 ETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCF 302
E FL ++C ++R+ +DIV K+ CF
Sbjct: 237 ELYFLD------------------EKC------------LQRYFRVLDIVRSCDKKTRCF 266
Query: 303 TKSYYRYVKGTGSLLAT 319
TK Y + ++GTGS+ T
Sbjct: 267 TKGYSKRLEGTGSVFQT 283
>gi|47207937|emb|CAF91437.1| unnamed protein product [Tetraodon nigroviridis]
Length = 405
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 99/165 (60%), Gaps = 1/165 (0%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLTAA 71
RVLE YSGIGGM Y+L +++V QVV A DIN ANDVY NF I+ +T
Sbjct: 1 MRVLELYSGIGGMHYALKESEVCHQVVAAVDINTTANDVYRHNFPSTALLNKTIEGITLE 60
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
E + L+SPPCQP+TR GLQ+ +D+R SFL +++L+P K P + +ENV G
Sbjct: 61 EFNQLSFDVILMSPPCQPFTRIGLQRDVADSRTRSFLHVVDLLPRLSKAPVFILLENVKG 120
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
FE S ++ L Y QE ++SP FG+P SR RY+ LAK
Sbjct: 121 FEKSAAREYLLRTLRECGYAVQEMLVSPTHFGIPNSRLRYYLLAK 165
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 82/145 (56%), Gaps = 19/145 (13%)
Query: 254 VDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGT 313
+ DF +E + +D+ HFL P L+ R+ +DIV P +R CFTK Y +YV+GT
Sbjct: 267 IQDFLEPQENLNLDQ-----HFLPPKILL-RYAQLLDIVRPTCRRSICFTKGYGKYVEGT 320
Query: 314 GSLLATV-------------QPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHL 360
GS+L Q + + L E LRYFTPREVANL FP F FP +
Sbjct: 321 GSVLQCCMDTSVEHVFPRLDQCSEEERVQKLLELKLRYFTPREVANLMGFPPTFSFPESV 380
Query: 361 SLRQRYALLGNSLSIAVVAPLLQYL 385
S +Q+Y LLGNSL++ VVA LLQ L
Sbjct: 381 STKQQYRLLGNSLNVVVVAKLLQLL 405
>gi|428178936|gb|EKX47809.1| hypothetical protein GUITHDRAFT_137189 [Guillardia theta CCMP2712]
Length = 380
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 107/169 (63%), Gaps = 6/169 (3%)
Query: 15 VLEFYSGIGGMRYS------LMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL 68
+LEF+SGIGGM Y+ + S ++V AF+++D N VY NFG P Q +I++L
Sbjct: 11 ILEFFSGIGGMHYAAENWSRASSSSRSVEIVAAFEVSDVCNLVYSSNFGENPIQRSIEHL 70
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
A+ LD + A WL+SPPCQPYT G QK D RA + L + +++ +PP+ + +EN
Sbjct: 71 DASYLDSFNADTWLMSPPCQPYTSMGKQKDDQDPRARALLHLCQVVQDMQRPPNFILLEN 130
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
V F+ S++H + ++ L + ++ EF+LSP QFG+P R RY+ LA+R
Sbjct: 131 VNNFQHSNSHDRWLQALGSIGFMVHEFLLSPTQFGIPNERIRYYALARR 179
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 81/157 (51%), Gaps = 38/157 (24%)
Query: 270 VSIDHFLVPLSLIERW-----GSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKN 324
V + ++V + + +W G DIV P+S+RC CFTKSY +Y++GTGSLL+T
Sbjct: 223 VDLTPYMVADNDLMKWKHGLQGYVFDIVTPESRRCSCFTKSYSKYIRGTGSLLSTNFYDE 282
Query: 325 KGK-----------------------------ASSLKEQHLRYFTPREVANLHSFPGD-F 354
+G+ ++++ LRYFT EV+ L FP + F
Sbjct: 283 EGRLKKMNFIVLPHSGSSRCIFDVEDPWSIQDLNAMRGLKLRYFTETEVSRLMGFPEERF 342
Query: 355 QFPHHL---SLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
+FP + R Y +LGNSL++ VVA LL+YLF +
Sbjct: 343 KFPQEMLYPKSRLGYRMLGNSLNVEVVASLLEYLFKE 379
>gi|39995337|ref|NP_951288.1| DNA methyltransferase [Geobacter sulfurreducens PCA]
gi|39982099|gb|AAR33561.1| DNA methyltransferase, putative [Geobacter sulfurreducens PCA]
Length = 305
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 169/375 (45%), Gaps = 81/375 (21%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQNLTAAE 72
R +E + GIGG ++ V +VV A D ++ A Y LNF GH + +++ ++A E
Sbjct: 2 RAVELFCGIGGFAAAVEGTGV--RVVAAMDQDEAALATYRLNFPGHGARKVDLERVSAWE 59
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP--PHMLFVENVV 130
L G W LSPPCQPY +G+++ +D RA S + IL L P L +ENV
Sbjct: 60 LTAGGVDLWWLSPPCQPYCERGVRRDLADPRARSLVHILNLAARMSDEALPRHLALENVA 119
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 190
GF S+ H ++ E+L++ Y QE +L P + G+P RPRY+ A R+ L+ +
Sbjct: 120 GFVGSEAHGRLTEVLSSRGYRLQERLLCPTELGIPSRRPRYYLAASRESLA------PAE 173
Query: 191 LLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 250
+L SP P QP + LL + N + L
Sbjct: 174 VL-SPLP-------------RQPLAEYLDLLPA-----------------NGQPAELLLS 202
Query: 251 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 310
A V+ FGA F + +D PD+ CFT Y R +
Sbjct: 203 PAIVERFGAG--------------FRI-----------LDPADPDAY-TTCFTSGYGRSL 236
Query: 311 KGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLG 370
+G+ L +R F+P E+A L FP F+FP + LR+R+ L+G
Sbjct: 237 TASGAYLRC-------------SDGVRRFSPEEIARLLHFPPSFRFPEEVPLRKRWQLVG 283
Query: 371 NSLSIAVVAPLLQYL 385
NSLS+A V +L+ L
Sbjct: 284 NSLSVAAVREVLRAL 298
>gi|221039820|dbj|BAH11673.1| unnamed protein product [Homo sapiens]
Length = 306
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/295 (35%), Positives = 156/295 (52%), Gaps = 32/295 (10%)
Query: 82 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 141
L+SPPCQP+TR G Q +D+R SFL IL+++P K P + +ENV GFE S T +
Sbjct: 3 LMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTRDLL 62
Query: 142 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ---LLNNQLLRS-- 194
I+ + N + QEF+LSP G+P SR RYF +AK +PL F+ L+ + S
Sbjct: 63 IQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKIESVH 122
Query: 195 PSPLLGNDDMTVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLSTGTA 252
P + + + K+ +P+ S D ++ D + LE + + N + LS
Sbjct: 123 PQKYAMDVENKIQEKNVEPNISLDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLS--VK 180
Query: 253 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 312
+ DF ++ ++ +L+P + R+ +DIV P +R CFTK Y Y++G
Sbjct: 181 MLKDF--------LEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 232
Query: 313 TGSLLAT---VQPKNKGKA---SSLKEQ-------HLRYFTPREVANLHSFPGDF 354
TGS+L T VQ +N K+ S +EQ LRYFTP+E+ANL FP +F
Sbjct: 233 TGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEF 287
>gi|194765989|ref|XP_001965107.1| GF21561 [Drosophila ananassae]
gi|190617717|gb|EDV33241.1| GF21561 [Drosophila ananassae]
Length = 334
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 105/167 (62%), Gaps = 2/167 (1%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTA 70
+RVLE +SGIGGM Y+ A + +VV A D+N AN VY NFG + + NIQ+LT
Sbjct: 2 GFRVLELFSGIGGMHYAFQCAQLEGEVVGAMDVNTVANAVYAHNFGQKTVKTRNIQSLTE 61
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
E+ A+ L+SPPCQP+TRQGLQK + D R+ + + LIP K + +ENV
Sbjct: 62 KEVTKVNANMILMSPPCQPHTRQGLQKDTEDRRSDALTHLCALIPE-CKTLQYILMENVK 120
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
GFE S + ++ L +++ +EFIL+P QF VP +R RY+C+A++
Sbjct: 121 GFECSQARNQFVDALEKAEFYWREFILTPTQFNVPNTRHRYYCIARK 167
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 69/126 (54%), Gaps = 14/126 (11%)
Query: 274 HFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKN--------- 324
+FLVP ++ + MDI++P R CFTK Y Y +GTGS + +
Sbjct: 206 NFLVPDDVLTKRVLVMDIIHPTQSRSMCFTKGYTHYTEGTGSAYTPLSEEESHRLFKLLE 265
Query: 325 -----KGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVA 379
+ + L + LRYFTPREVA L SFP +F FP + RQ+Y LLGNS+++ VV
Sbjct: 266 DTEDAEARLKLLHQIKLRYFTPREVARLMSFPEEFTFPGETTNRQKYRLLGNSINVKVVG 325
Query: 380 PLLQYL 385
L++ L
Sbjct: 326 ELIKLL 331
>gi|255072031|ref|XP_002499690.1| DNA methyltransferase [Micromonas sp. RCC299]
gi|226514952|gb|ACO60948.1| DNA methyltransferase [Micromonas sp. RCC299]
Length = 401
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 114/182 (62%), Gaps = 13/182 (7%)
Query: 14 RVLEFYSGIGGMRYSLMKA---DVSAQV--VEAFDINDKANDVYELNFGHRPYQG----- 63
+++EFY+G+G MR+SL +A D+ A V + + D ++ AN VY N+ G
Sbjct: 60 KMVEFYAGMGTMRWSLERALESDMGASVTALASIDNSEVANAVYLANYPDENASGVLMRR 119
Query: 64 NIQNLTAAE-LDMY--GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP 120
N+++L++ E LD GA W LSPPCQPYTR+G + D RA SF +ILE +P P
Sbjct: 120 NVEHLSSVETLDARFGGADVWTLSPPCQPYTRKGKRLHGEDPRAGSFARILEALPKLRAP 179
Query: 121 PHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
P + VENVVGFE+S+T ++ L + Y+ +E+ SP+ GVP +R RY+ LAKRKPL
Sbjct: 180 PERILVENVVGFESSETRRALVAALDEAGYVWREYHASPVDIGVPCTRTRYYALAKRKPL 239
Query: 181 SF 182
SF
Sbjct: 240 SF 241
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 266 VDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLA------- 318
++R V V +ER+ +D+V P RC FT Y + V G GS+LA
Sbjct: 265 LERPVHDADLAVEAGTVERYWRWLDVVSPSCVRCSTFTSGYGKTVYG-GSVLASDAFVAE 323
Query: 319 -------TVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFP-HHLSLRQRYALLG 370
T + + G +RYF+PRE+ANLH ++ P L+ RQ + +G
Sbjct: 324 HCDVDAGTGRARLVGPFKGEWAGEMRYFSPREMANLHGLDAGWRLPSRELTRRQLWFTVG 383
Query: 371 NSLSIAVVAPLLQYLF 386
NS+S+ VVA L++ L
Sbjct: 384 NSISVDVVAALMRQLM 399
>gi|358254165|dbj|GAA54195.1| DNA (cytosine-5-)-methyltransferase, partial [Clonorchis sinensis]
Length = 320
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 161/348 (46%), Gaps = 68/348 (19%)
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
E+ + A W +SPPCQP+TR G QK D R+ SF +L LI P + +ENV G
Sbjct: 1 EVTAFNADMWSMSPPCQPFTRLGNQKHEEDNRSASFFYVLGLI--AAIRPKFILLENVKG 58
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL---- 187
FE ++ + +++L Y Q+F+L+PLQFGVP R RY+ +A S L
Sbjct: 59 FEHTEPWCQFLKVLQTCGYRYQQFLLTPLQFGVPNCRLRYYLVASSSSDSACSGLFASHV 118
Query: 188 ------NNQLLRSPS--PLLGNDDMTVITKH----DQPDDSWDKLLESCDPVERFLEFSN 235
N L P+ P L + V H +PD+++D L C P+ +L
Sbjct: 119 HDSDHANTIHLIPPADLPPLPGCECAVCLGHVSHITKPDENFDDYLPYCRPISDYL---- 174
Query: 236 SGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPD 295
+ Q +++ FL D C ++R+ +DIV P
Sbjct: 175 AQQQQHSKLDFLD------------------DNC------------LKRYFHVLDIVRPC 204
Query: 296 SKRCCCFTKSYYRYVKGTGSLL----------------ATVQPKNKGKASSLKEQHLRYF 339
++ CFTK Y + ++GTGS+L T + + S K LR+F
Sbjct: 205 DRKSRCFTKGYQKRIEGTGSVLQTATDTLTSEEINAQWITARSDPETLMSLAKRLQLRFF 264
Query: 340 TPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
REVANL FP + FP ++ +QR LLGNS+++ VVA L+ + F
Sbjct: 265 HSREVANLLCFPQTYNFPEDVTEKQRIRLLGNSVNVLVVAHLIHWAFG 312
>gi|156358701|ref|XP_001624654.1| predicted protein [Nematostella vectensis]
gi|156211447|gb|EDO32554.1| predicted protein [Nematostella vectensis]
Length = 226
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 104/181 (57%), Gaps = 7/181 (3%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQN 67
D +RV+EFYSGIGGM Y+L +A+VV A +I+ AN VY NF + + NI+
Sbjct: 3 DSSTFRVVEFYSGIGGMHYALKGCKKNAEVVAALEISTTANTVYGHNFPTTKIWNCNIEV 62
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+ A ++SPPCQPYT GLQ S D RA SFL IL L+ PP +E
Sbjct: 63 CELCNVTTMPAIYMVMSPPCQPYTWVGLQGASKDPRALSFLHILSLLKRLQHPPKYWLIE 122
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 187
NV GFETSDT ++ NS FI+S QFG+P SR RY+ LAKR PL+F +
Sbjct: 123 NVKGFETSDTRFYILLAFCNS------FIVSSPQFGIPNSRLRYYLLAKRHPLTFSTAMG 176
Query: 188 N 188
N
Sbjct: 177 N 177
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 273 DHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSL 316
+ FL+P ++ R+ +DIV S+R CCFTK+Y Y +GTGS+
Sbjct: 183 EQFLLPTKVLSRFSLVLDIVTAKSRRSCCFTKAYGHYAEGTGSV 226
>gi|159490457|ref|XP_001703193.1| DNA methyltransferase [Chlamydomonas reinhardtii]
gi|158270733|gb|EDO96569.1| DNA methyltransferase [Chlamydomonas reinhardtii]
Length = 539
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 100/176 (56%), Gaps = 8/176 (4%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADV------SAQVVEAFDINDKANDVYELNFGHRPY 61
NDG R+L+ YSG+G + +L + V QV A DIN AN VY + G P
Sbjct: 25 NDGGVVRILDLYSGVGCLHAALGRPGVLPPGCTQVQVAAAVDINTAANAVYAVEHGTEPR 84
Query: 62 QGNIQNLTAAELDMYGAHAWLLSPPCQPYTR--QGLQKQSSDARAFSFLKILELIPHTVK 119
++ +TAA+LD A WLL+PPCQPYT +K ++D RA S L + ++P +
Sbjct: 85 ALDLTRVTAAQLDALCADVWLLTPPCQPYTTTTNARRKDTADPRAASLLHLASVLPSMRR 144
Query: 120 PPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
PP L +ENV GF S + + LA Y QEF++SP Q GVPYSRPRYF LA
Sbjct: 145 PPSRLLLENVPGFAGSHSRRVLAAALAGCGYGLQEFLVSPHQLGVPYSRPRYFALA 200
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 336 LRYFTPREVANLHSFPGDFQFPHHLSLR----QRYALLGNSLSIAVVAPLLQYLF 386
LR+FTP EVA LH P + + Q+YALLGN LS+ V A LLQYLF
Sbjct: 470 LRFFTPEEVAALHGLPQGWAARAAAAGVGAARQQYALLGNGLSVDVAAHLLQYLF 524
>gi|389750852|gb|EIM91925.1| S-adenosyl-L-methionine-dependent methyltransferase [Stereum
hirsutum FP-91666 SS1]
Length = 452
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 152/304 (50%), Gaps = 31/304 (10%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP---YQGNIQNLTA 70
R LEFYSGIGG+ +L ++ VS +VV+AFD + A VY N H P + +I LT
Sbjct: 7 RALEFYSGIGGLHLALERSSVSGEVVQAFDWDQLACSVY--NSNHEPKLARKVDIATLTP 64
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQ-KQSSDARAFSFLKILE-LIP---HTVKPPHMLF 125
L Y A WLLSP CQPYT Q K + D RA SFL I+ L+P + P +
Sbjct: 65 DILAAYAADLWLLSPSCQPYTVLNPQAKGADDPRAESFLWIVRTLLPGLKEKGREPGWVL 124
Query: 126 VENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
+ENV GFETS T +IE++ + Y T E +L+PLQFG+P SR RY+ LA++ P
Sbjct: 125 IENVAGFETSSTRQILIEVMKSLGYHTIELLLTPLQFGIPNSRLRYYMLARKTP------ 178
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQ-----PDDSWDKLLESCDPVERFLEFSNSGDQV 240
N L S P + + D+ P +D + DP L+ + + V
Sbjct: 179 -FNIPLPPSSRPSDPTSNECALPPEDRVWRHIPGRGYDWV----DP-RNGLDVESVENNV 232
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
+ +L + E+ E + +V ++ +WG D+V P+++R C
Sbjct: 233 DEIRRYLDRSKESRWKKVVGEDGKE----RWMHPHMVSDRVLGKWGRLFDVVLPEARRTC 288
Query: 301 CFTK 304
CFT+
Sbjct: 289 CFTR 292
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 13/70 (18%)
Query: 331 LKEQHLRYFTPREVANLHSFP-------------GDFQFPHHLSLRQRYALLGNSLSIAV 377
L LRYF+P E+ L F F +P +S + +Y L+GNS+++ V
Sbjct: 383 LNPLQLRYFSPSELLRLFCFERVANDTEEKTEEEKGFVWPEGISTKSKYRLIGNSVNVLV 442
Query: 378 VAPLLQYLFA 387
V+ L+ +LFA
Sbjct: 443 VSRLIDFLFA 452
>gi|116007318|ref|NP_001036355.1| methyltransferase 2, isoform C [Drosophila melanogaster]
gi|113194978|gb|ABI31309.1| methyltransferase 2, isoform C [Drosophila melanogaster]
Length = 345
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 106/167 (63%), Gaps = 2/167 (1%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTA 70
+RVLE +SGIGGM Y+ A + Q+V A D+N AN VY N+G + NIQ+L+
Sbjct: 2 VFRVLELFSGIGGMHYAFNYAQLDGQIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLSV 61
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
E+ A+ L+SPPCQP+TRQGLQ+ + D R+ + + LIP + ++L +ENV
Sbjct: 62 KEVTKLQANMLLMSPPCQPHTRQGLQRDTEDKRSDALTHLCGLIPECQELEYIL-MENVK 120
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
GFE+S + IE L S + +EFIL+P QF VP +R RY+C+A++
Sbjct: 121 GFESSQARNQFIESLERSGFHWREFILTPTQFNVPNTRYRYYCIARK 167
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 77/145 (53%), Gaps = 26/145 (17%)
Query: 266 VDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS---------- 315
V+ VS D FLVP ++ + MDI++P R CFTK Y Y +GTGS
Sbjct: 199 VEENVSPD-FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAYTPLSEDES 257
Query: 316 -----LLATVQPKNKGKASS----------LKEQHLRYFTPREVANLHSFPGDFQFPHHL 360
L+ + N+ + S L + LRYFTPREVA L SFP +F+FP
Sbjct: 258 HRIFELVKEIDTSNQDASKSEKILQQRLDLLHQVRLRYFTPREVARLMSFPENFEFPPET 317
Query: 361 SLRQRYALLGNSLSIAVVAPLLQYL 385
+ RQ+Y LLGNS+++ VV L++ L
Sbjct: 318 TNRQKYRLLGNSINVKVVGELIKLL 342
>gi|91089179|ref|XP_974235.1| PREDICTED: similar to DNA cytosine-5 methyltransferase [Tribolium
castaneum]
Length = 579
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 105/173 (60%), Gaps = 3/173 (1%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
+ +LE YSGIGGM ++L + V + A DIN AN VY+ NF H N+Q+LT
Sbjct: 249 QKMEILELYSGIGGMHWALKVSGVEGTIKAAVDINPTANSVYKHNFPHINLLNRNVQSLT 308
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
++ G + L+SPPCQP+TR GLQ+ +D R SF+ +L ++P +K +L +ENV
Sbjct: 309 PQFINKLGVNTILMSPPCQPFTRNGLQEDINDERTKSFIHVLAILPD-LKVTRIL-IENV 366
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
GFE S +IE L + QEFIL+P Q G+P +R RY+CLAK+ P F
Sbjct: 367 KGFERSKMRDLLIETLEKCGFNYQEFILTPTQIGIPNTRHRYYCLAKKPPNVF 419
>gi|270012712|gb|EFA09160.1| DNA methyltransferase 2 [Tribolium castaneum]
Length = 329
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 104/169 (61%), Gaps = 3/169 (1%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAEL 73
+LE YSGIGGM ++L + V + A DIN AN VY+ NF H N+Q+LT +
Sbjct: 3 ILELYSGIGGMHWALKVSGVEGTIKAAVDINPTANSVYKHNFPHINLLNRNVQSLTPQFI 62
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
+ G + L+SPPCQP+TR GLQ+ +D R SF+ +L ++P +K +L +ENV GFE
Sbjct: 63 NKLGVNTILMSPPCQPFTRNGLQEDINDERTKSFIHVLAILPD-LKVTRIL-IENVKGFE 120
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
S +IE L + QEFIL+P Q G+P +R RY+CLAK+ P F
Sbjct: 121 RSKMRDLLIETLEKCGFNYQEFILTPTQIGIPNTRHRYYCLAKKPPNVF 169
>gi|298714740|emb|CBJ25639.1| Cytosine-C5 specific DNA methyltransferase [Ectocarpus siliculosus]
Length = 412
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 109/168 (64%), Gaps = 5/168 (2%)
Query: 15 VLEFYSGIGGMRYSLMKA--DVSAQV-VEAFDINDKANDVYELNF-GHRPYQGNIQNLTA 70
LEFYSGIGG+R SL KA VS + V +F+I+ AN VYE NF G + +I++L+A
Sbjct: 55 ALEFYSGIGGLRVSLEKALEAVSLETSVGSFEISSVANSVYEHNFPGCSVTRRSIEHLSA 114
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
++++ A WLLSPPCQP+ R G + D R+ SFL +L L+ PP LF+ENV
Sbjct: 115 QDIEV-DADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIRTPPSFLFLENVQ 173
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
GFE S H +++E L + ++++LSP Q G+P SR RY+CLA+R+
Sbjct: 174 GFEGSHAHLRLLETLIARGFDVEQYLLSPNQLGIPNSRLRYYCLARRR 221
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 290 DIVYPDSKRCCCFTKSYYRYVKGTGSL-LATVQPKNKGKASSL-----------KEQHLR 337
D+V S FTK Y ++ G + L T + + L + + +R
Sbjct: 281 DVVTLQSTETTTFTKGYRKHAGRAGPVVLLTDDGERRVSGEKLGRFPSGLDLGPEGKEVR 340
Query: 338 YFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
+F+ E+ LH FP F FP L+ RQR AL+GNS+++ VVA LL+++
Sbjct: 341 WFSDGEMLRLHGFPEAFDFPTALTPRQRCALVGNSVNVEVVALLLEFML 389
>gi|303277675|ref|XP_003058131.1| DNA methyltransferase [Micromonas pusilla CCMP1545]
gi|226460788|gb|EEH58082.1| DNA methyltransferase [Micromonas pusilla CCMP1545]
Length = 416
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 105/173 (60%), Gaps = 8/173 (4%)
Query: 14 RVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHR---PYQGNIQNLT 69
R++E++SG G MR +L + + V A D ++ AN VY NF + P +GN+++ T
Sbjct: 63 RLVEWFSGTGMMRVALDRGTSRGVEHVAAIDNSEVANAVYAANFPNDATPPSRGNVEHWT 122
Query: 70 AAELDMYG---AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
AA +D G A W LSPPCQPYTR+G Q+ D RA +F +LE+ P P + V
Sbjct: 123 AARIDAEGLGAAELWTLSPPCQPYTRKGKQRHGDDPRATAFAHLLEIFPTLRARPDRVLV 182
Query: 127 ENVVGFETSDTHAKMIEILANSDYLTQEFI-LSPLQFGVPYSRPRYFCLAKRK 178
ENVVGFETS+T +I L + Y +EF+ SP GVP +RPRY+ LAK++
Sbjct: 183 ENVVGFETSETRDALIRALETTGYAWREFVGASPADVGVPNARPRYYALAKKR 235
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 16/139 (11%)
Query: 266 VDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT------ 319
+D + D VP + E++ +D+V P S R CFT Y + V G GS+LA+
Sbjct: 277 LDERAASDDLTVPSRVTEKYWKWLDVVAPSSTRSECFTAGYGKTVYG-GSVLASDAFLSA 335
Query: 320 -----VQPKNKGK---ASSLKEQHLRYFTPREVANLHSFPGDFQFPHH-LSLRQRYALLG 370
V G+ AS LRYF+PRE+A+LH DF P L+ RQ Y LG
Sbjct: 336 RERDFVDAGGSGRVRLASPPPPGALRYFSPREIASLHGLGDDFALPSEVLTRRQLYFALG 395
Query: 371 NSLSIAVVAPLLQYLFAQA 389
NS+S+ VV+ L+++LF A
Sbjct: 396 NSISVDVVSSLMRHLFDDA 414
>gi|299755231|ref|XP_001828513.2| DNA methyltransferase ZMET4 [Coprinopsis cinerea okayama7#130]
gi|298411129|gb|EAU93300.2| DNA methyltransferase ZMET4 [Coprinopsis cinerea okayama7#130]
Length = 330
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 162/336 (48%), Gaps = 57/336 (16%)
Query: 81 WLLSPPCQPYTRQGLQKQSS-DARAFSFLKILELIPHTVKP----PHMLFVENVVGFETS 135
WLLSP CQPYT Q + D RA S+L +L + ++ P + VENV GFE S
Sbjct: 23 WLLSPACQPYTVLNPNAQGAEDPRAQSYLHLLRNVLPGLEERGCLPGYVLVENVAGFEGS 82
Query: 136 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 195
T +E+L Y QE +L+PLQFG+P SR RY+ LA+R R L ++
Sbjct: 83 TTRQLQLEVLKELGYHIQELLLTPLQFGIPNSRLRYYMLARRGKDFSRPGLGSSS---GD 139
Query: 196 SPLLGNDDMTVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLSTGTAA 253
P + ++V+ DQ D+ ++L P E E V G+L
Sbjct: 140 GPRGEEEGVSVL---DQGDEEEYRVLRHIPGQPAEWREE------DVEELRGYL------ 184
Query: 254 VDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGT 313
D+ + EE+ + F V ++ +WG DIV P +R CCFT+ Y V+ +
Sbjct: 185 -DEETSLEES---------NEFAVSDKVLSKWGRLFDIVLPSGRRSCCFTRGYTHLVERS 234
Query: 314 GSLLAT-------------VQPKNKGKASSLKEQH---LRYFTPREVANLHSFPGD---- 353
GS+L +Q +G A ++K + LRYF+P E+ + +F G
Sbjct: 235 GSILQMAEDLDTTQTFDKFLQETREGNADAVKILYPLRLRYFSPSELLRIFAFEGKGGDG 294
Query: 354 --FQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
F +P +S + +Y L+GNS+++ VV L++YL +
Sbjct: 295 QGFVWPTGVSTKSKYKLIGNSVNVRVVEELIRYLLS 330
>gi|339773547|gb|AEK05180.1| DNA methyltransferase 2 [Schistocerca gregaria]
Length = 199
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 110/186 (59%), Gaps = 3/186 (1%)
Query: 26 RYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLS 84
R++L + S +VV A DIN AN VY NF + Q NI++LTA E++ + L+S
Sbjct: 4 RHALCSSSGSGEVVAAVDINTVANLVYAANFPQTKLLQKNIESLTAEEINNMKINMILMS 63
Query: 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEI 144
PPCQP+TR GLQK ++D R FL L L+P + +ENV GFE S+ + I
Sbjct: 64 PPCQPFTRNGLQKDTADNRTSPFLHFLRLLPELTGNLKYILLENVKGFEKSEARDMFVNI 123
Query: 145 LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDM 204
L ++++ QEF+LSP QF +P SR RY+ +AK++PL+F + L+ + +L +D
Sbjct: 124 LQEANFIFQEFLLSPFQFHIPNSRTRYYLIAKKRPLNFSFSI--KPLVDDITQILDGNDS 181
Query: 205 TVITKH 210
T+ H
Sbjct: 182 TLYKTH 187
>gi|444302579|gb|AGD99088.1| DNA methyltransferase 2, partial [Quercus suber]
Length = 78
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/78 (85%), Positives = 71/78 (91%)
Query: 306 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
YYRYVKGTGSLLATVQPK KGK+S LKEQ LR+FTPREVANLHSFP DF FP +SLRQR
Sbjct: 1 YYRYVKGTGSLLATVQPKKKGKSSPLKEQCLRFFTPREVANLHSFPEDFHFPQQISLRQR 60
Query: 366 YALLGNSLSIAVVAPLLQ 383
YALLGNSLSIAVVAPLL+
Sbjct: 61 YALLGNSLSIAVVAPLLR 78
>gi|158284395|ref|XP_306830.2| Anopheles gambiae str. PEST AGAP012836-PA [Anopheles gambiae str.
PEST]
gi|157021124|gb|EAA45924.2| AGAP012836-PA [Anopheles gambiae str. PEST]
Length = 238
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 120/218 (55%), Gaps = 8/218 (3%)
Query: 5 MCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-G 63
M E RVLE +SGIGGMR +L +A ++V A D+N AN+VY+ NFG + + G
Sbjct: 7 MESTKSEPHRVLELFSGIGGMRMALEQAGKEFEIVSAIDVNPIANEVYKHNFGAKTVRNG 66
Query: 64 NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHM 123
NI +LTA ++ L+SPPCQP+TR G +D R+ FL I EL+ K P +
Sbjct: 67 NILSLTAEKVTKLKVDTILMSPPCQPFTRNGKFNDINDRRSDPFLHICELLD---KMPLV 123
Query: 124 LFV--ENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
F+ ENV GFE S L + + Q++ILSP QFGVP +R RY+C+AKR
Sbjct: 124 KFILMENVKGFENSQACEMYKARLREAGFHYQQYILSPHQFGVPNTRHRYYCIAKRHGAD 183
Query: 182 FRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDK 219
F+ + + ++ +P G V T D D+ ++
Sbjct: 184 FKWK--SEDIITTPQSGCGAKQTLVGTIVDTQQDALEQ 219
>gi|195996059|ref|XP_002107898.1| hypothetical protein TRIADDRAFT_49657 [Trichoplax adhaerens]
gi|190588674|gb|EDV28696.1| hypothetical protein TRIADDRAFT_49657 [Trichoplax adhaerens]
Length = 254
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 100/167 (59%), Gaps = 15/167 (8%)
Query: 5 MCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQG 63
M G+ +V+EFYSGIGGM Y+L +++++A+++ A DIN AN+VY NFG+ P +Q
Sbjct: 1 MSSARGQVMQVVEFYSGIGGMHYALQESNINAKILAAIDINTVANNVYRHNFGNTPVWQR 60
Query: 64 NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHM 123
I ++ EL + +SPPCQP+TR G + +DAR SFL +++L+ PP
Sbjct: 61 EIGKISLKELQELNGDLYTMSPPCQPFTRLGKKADVNDARTSSFLHVIDLLIKMENPPKY 120
Query: 124 LFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPR 170
+ +ENV GFETS EF+L+PLQFG+P SR R
Sbjct: 121 ILLENVKGFETSAAR--------------NEFLLTPLQFGIPNSRLR 153
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 63/98 (64%), Gaps = 8/98 (8%)
Query: 290 DIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHS 349
++V PDS+R CCFTKSY+ Y +GTGS+L P + LRYFTPREVAN+H
Sbjct: 165 NVVKPDSQRSCCFTKSYFHYAEGTGSVLQITNP--------ILHLKLRYFTPREVANIHC 216
Query: 350 FPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
FP F FP + + +Q Y LLGNSL++ V + LL+ L
Sbjct: 217 FPVHFNFPENATKKQCYRLLGNSLNVHVASELLKLLIT 254
>gi|373487375|ref|ZP_09578043.1| DNA-cytosine methyltransferase [Holophaga foetida DSM 6591]
gi|372009457|gb|EHP10077.1| DNA-cytosine methyltransferase [Holophaga foetida DSM 6591]
Length = 289
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 99/167 (59%), Gaps = 5/167 (2%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
+EF+SGIGG RY+L +VV A+DI+ AND Y N G RP+ I +L +++
Sbjct: 4 AIEFFSGIGGWRYALGD---QGKVVRAYDISPAANDTYAHNHGDRPWDREIASLDPSQVQ 60
Query: 75 MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET 134
A WL+SPPCQP+ R G + D R+ +FL +++L+ + PP L +ENV+GF
Sbjct: 61 ALKADTWLMSPPCQPFCRMGNHRGLEDLRSKAFLHLMDLL--RLIPPEHLVLENVIGFLG 118
Query: 135 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
SD H + E L S +E+ L P QFG+P RPR + +A R P++
Sbjct: 119 SDAHELLAERLRASGMHWREYQLCPTQFGIPNLRPRVYLVASRHPIA 165
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 286 GSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVA 345
G + +V P+S+ CF Y + G+G L T Q +R F+P EVA
Sbjct: 200 GPGLALVNPESRTSACFIGGYGKRFVGSGPFLRT-------------PQGIRRFSPEEVA 246
Query: 346 NLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVV 378
L P +F+FP +S +RY LLGN LSI V
Sbjct: 247 RLLGLPREFRFPDSISRTKRYKLLGNGLSIPVA 279
>gi|428177515|gb|EKX46394.1| hypothetical protein GUITHDRAFT_107597 [Guillardia theta CCMP2712]
Length = 355
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 172/391 (43%), Gaps = 62/391 (15%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
RVLE +SGIGGM ++M+A+V A + A+D + N YELNF H P N + A +
Sbjct: 2 RVLELFSGIGGMHAAMMEAEVKAGEIVAYDTSLICNKTYELNFIHSPAPLNRCAVRAKLV 61
Query: 74 ------DMYGAHAWLLSPPCQPY--TRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
D+ G W +SPPCQPY T+ Q+ D R+ I++L+ PP +
Sbjct: 62 EQLEVEDLEGFDLWTMSPPCQPYSTTKAANQRDDLDPRSQGLHHIIKLLLDVKNPPKWIL 121
Query: 126 VENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
+ENV GF S K + + +++ S+R
Sbjct: 122 LENVKGFHGSKMQNKFLGAI------------------------------EQRGFSWRQF 151
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQ--PDDSWDKLLESCDPVERFLEFSNSGDQVNTE 243
LLN + P+ L D + T D D + + E+ D + +N E
Sbjct: 152 LLNPIQVGIPNNRLRYDMLLRATCDDWHYKGDLFTDVPETSD---------QRAEAMNGE 202
Query: 244 TGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIER-WGSAMDIVYPDSKRCCCF 302
+ + +F +E + D + P S++E+ W + V CF
Sbjct: 203 SSKEERSVRRLREF--LDEELGPD---DPQELVTPASILEKPWARGLSYVGQHDTTTFCF 257
Query: 303 TKSYYR-YVKGTGSLLATVQPKNKGKASSLKEQ------HLRYFTPREVANLHSFPGDFQ 355
T SY + Y K +GS+L + + KE +R F+PRE+ NL FP F+
Sbjct: 258 TGSYGKVYHKSSGSMLYMHADHALAEVALDKEDMTRHIGRIRLFSPREILNLMGFPKGFK 317
Query: 356 FPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
FP L+LR +Y L+GNS+++ VVA L ++L
Sbjct: 318 FPEGLTLRHKYKLVGNSINVTVVALLFKFLI 348
>gi|339237069|ref|XP_003380089.1| putative type II DNA modification methyltransferase [Trichinella
spiralis]
gi|316977147|gb|EFV60295.1| putative type II DNA modification methyltransferase [Trichinella
spiralis]
Length = 298
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 151/342 (44%), Gaps = 73/342 (21%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAAE 72
R+LE ++GIGG + V V A+DI++ N Y NFG ++ NI +LT E
Sbjct: 8 RILELFAGIGG-------SKVKYVPVGAYDIDETCNSTYVANFGGDIFRRRNICSLTWNE 60
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
LD + W+LSPPCQP+ G ++ +D+RA F+ I+E++ P + +ENV GF
Sbjct: 61 LDQLQSDFWMLSPPCQPFMLSGNRRDVNDSRAEPFVHIIEVLTKMQSFPKYILLENVPGF 120
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 192
S + E L Y ++ FIL P FG+P R R + +A+ + +
Sbjct: 121 INSVACTNLTETLEMKGYNSKIFILDPYDFGIPNHRKRAYLIAEHESV------------ 168
Query: 193 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTA 252
DD+ + +Q L +C V +
Sbjct: 169 ---------DDLVAVDACEQ--------LSNCPKV---------------------VCSK 190
Query: 253 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 312
+ +F + E+ + +LVP L+ MDIV D CFTK Y RYVKG
Sbjct: 191 PISEFLCTLQETELQK------YLVPERLLIH-KDCMDIVCRDDTSSNCFTKGYGRYVKG 243
Query: 313 TGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDF 354
TGS+L + K E+ LR+FTP E+ L FP F
Sbjct: 244 TGSIL-------RCKMQDGTEK-LRFFTPSEIQRLMGFPETF 277
>gi|194386588|dbj|BAG61104.1| unnamed protein product [Homo sapiens]
Length = 310
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 160/315 (50%), Gaps = 54/315 (17%)
Query: 94 GLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQ 153
G Q +D+R SFL IL+++P + +I+ + N + Q
Sbjct: 27 GRQGDMTDSRTNSFLHILDILPRDL----------------------LIQTIENCGFQYQ 64
Query: 154 EFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ---LLNNQLLRSPSPLLGNDDM--TV 206
EF+LSP G+P SR RYF +AK +PL F+ L+ + S P D+ +
Sbjct: 65 EFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKI 124
Query: 207 ITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETV 264
K+ +P+ S+D ++ D + LE + + N + LS + DF
Sbjct: 125 QEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLSV--KMLKDF------- 175
Query: 265 EVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT---VQ 321
++ ++ +L+P + R+ +DIV P +R CFTK Y Y++GTGS+L T VQ
Sbjct: 176 -LEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQ 234
Query: 322 PKNKGKAS---SLKEQ-------HLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGN 371
+N K+ S +EQ LRYFTP+E+ANL FP +F FP ++++QRY LLGN
Sbjct: 235 VENIYKSLTNLSQEEQITKLLVLKLRYFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGN 294
Query: 372 SLSIAVVAPLLQYLF 386
SL++ VVA L++ L+
Sbjct: 295 SLNVHVVAKLIKILY 309
>gi|326427797|gb|EGD73367.1| methyltransferase [Salpingoeca sp. ATCC 50818]
Length = 519
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 100/178 (56%), Gaps = 16/178 (8%)
Query: 14 RVLEFYSGIGGMRYSLM--------------KADVSAQVVEAFDINDKANDVYELNFGHR 59
RV++ YSGIGG+ +L +A S + V FD+N AN VY+ N
Sbjct: 8 RVVDLYSGIGGLHAALGVAIARINARPTRAGQAPWSVEDVRPFDVNTAANKVYQHNHSIA 67
Query: 60 PYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
P I LT + ++ WL+SPPCQPYTR G Q D RA SFL ++E++
Sbjct: 68 PSPRGIDALTPRHV--RDSNLWLMSPPCQPYTRIGKQLDVEDPRAASFLHMIEMLSKMES 125
Query: 120 PPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
PP +LF+ENV FE S+T +++ +L +Y QEF++SP Q G+P +R RY+ LA R
Sbjct: 126 PPQLLFLENVKNFEHSETRRRLLHVLHQRNYSVQEFLVSPTQLGIPNTRLRYYLLASR 183
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 337 RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
R F E+ LH FP F+ P ++ +Q L+GNS+++ VVA LLQYL
Sbjct: 455 RLFAVSEMLRLHGFPEAFEMPAGITQKQGRGLVGNSVNVEVVAHLLQYLL 504
>gi|290997570|ref|XP_002681354.1| predicted protein [Naegleria gruberi]
gi|284094978|gb|EFC48610.1| predicted protein [Naegleria gruberi]
Length = 435
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 197/450 (43%), Gaps = 88/450 (19%)
Query: 5 MCKNDGEAWRVLEFYSGIGGMRYSL--MKADVSAQV---------VEAFDINDKANDVYE 53
M +D E + + EFYSGIGG R SL ++A AQV +EAFDIN+ AN +Y
Sbjct: 1 MASHDEEVY-IAEFYSGIGGTRMSLEMIQAFFEAQVNGKKIKFNWIEAFDINENANTLYN 59
Query: 54 LNFGHRPYQ--------GNIQN----------LTAAELDMYGAHA----WLLSPPCQPYT 91
F H+P G+ QN L A+ + W +SPPCQP+T
Sbjct: 60 NLFNHKPCAKDIVHIPIGDFQNHYFKLFKNSSLEQAKKKLKTEQTRKLMWTMSPPCQPFT 119
Query: 92 RQGLQKQSSDARAFSFLKIL-ELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDY 150
G +K S D R+ SFL ++ +L P + P +FVENV FE S T ++ L N Y
Sbjct: 120 LNGNRKDSEDDRSKSFLFLMADLFPQVL--PDYIFVENVKNFEISKTRQHLVNQLENFGY 177
Query: 151 LTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKH 210
+E+++ P Q G+P R RY+ + KR + PL +++ I H
Sbjct: 178 KYEEYLICPTQLGLPNQRVRYYLIGKR-------------VANITPPLEKTEELREIPLH 224
Query: 211 DQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD--DFGAAEETVEVDR 268
D +L +P+ ++F +S + L G +D D + T ++
Sbjct: 225 -LITDPPKTILRDQEPLRPKIDFESSYGK----EKILQLGAKLIDLYDLNSILLTPGEEK 279
Query: 269 CVSIDH-FLVPLSLIERWGSAMDIVYPD----------SKRCCCFTKSY--YRYVKGTGS 315
D +L ++ + G D+++ D C C TKSY ++++GTG
Sbjct: 280 KYQTDMIYLNEKNITKIKGYRYDLIFKDPYGKKNLTPIKSECSCITKSYGQVQFLRGTGP 339
Query: 316 LLATVQPKNKGKASSLKEQH-----------------LRYFTPREVANLHSF-PGDFQFP 357
++ + S + + LR+ P EV+ L +F P
Sbjct: 340 IVLILDENQMLDIDSNETIYKKIDFENPVETMMPLGKLRFLHPIEVSRLMTFVPWIMNNT 399
Query: 358 HHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
L+++Q Y L+GNS++ +A ++ LF+
Sbjct: 400 GKLTVKQLYKLMGNSVNPITLANIIYLLFS 429
>gi|345309099|ref|XP_001520279.2| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like, partial
[Ornithorhynchus anatinus]
Length = 264
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 129/271 (47%), Gaps = 26/271 (9%)
Query: 67 NLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
++ E D L+SPPCQP+TR GL+ ++D R SFL +L ++P KPP + +
Sbjct: 1 GISLQEFDRLSFDVMLMSPPCQPFTRTGLRGDAADGRTNSFLYLLRILPRLRKPPRYILL 60
Query: 127 ENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
ENV GFE S T +++ + + QEF+LSP G+P SR RYF +AK + F Q+
Sbjct: 61 ENVKGFEGSATRDLLVQTIEKCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSSPFPFQV 120
Query: 187 LNNQLLRSPSPLLGNDDMTVIT------KHDQP--DDSWDKLLESCDPVER--------F 230
L P P GN + + +P +++ + S D R
Sbjct: 121 RGQILTEFPEPGSGNSPRREVAVAGGSERAAEPGKEENTEPRCRSADGTPRPGREAVLFK 180
Query: 231 LEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMD 290
LE + + G LS G EE R +FL P L+ R+G +D
Sbjct: 181 LETAEEMQRKRQRDGDLSVEMLR----GFLEEDSGPSR-----YFLPPKPLL-RYGLLLD 230
Query: 291 IVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ 321
+V P +R CFTK Y YV+GTGS+L T +
Sbjct: 231 VVKPTCRRSTCFTKGYGSYVEGTGSVLQTAE 261
>gi|312385012|gb|EFR29606.1| hypothetical protein AND_01274 [Anopheles darlingi]
Length = 348
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 97/166 (58%), Gaps = 2/166 (1%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-GNIQNLT 69
+ RVLE +SGIGGMR +L + + ++V A D+N AN VY NFG + + GNI +LT
Sbjct: 11 KTLRVLELFSGIGGMRMALERTGRAFEIVSAIDVNPIANSVYTHNFGEKAARNGNILSLT 70
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
A + L+SPPCQP+TR G D R+ FL I EL+ H + + +ENV
Sbjct: 71 AKTISKLAIDTVLMSPPCQPFTRNGKFNDIHDRRSDPFLHICELL-HEIPTVEFILMENV 129
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
GFE S A L + + QE++LSP QFG+P +R RY+CLA
Sbjct: 130 KGFEGSQACALYKARLKEAGFEYQEYVLSPHQFGIPNTRHRYYCLA 175
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 266 VDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNK 325
VD + + +L+ + + + MD+ P+S CFTK+Y Y +GTGS+ P +K
Sbjct: 210 VDPSENDEKYLLKEATLRKHLPIMDVCTPESNNSMCFTKAYTHYAEGTGSVFT---PHSK 266
Query: 326 GK 327
K
Sbjct: 267 EK 268
>gi|395539996|ref|XP_003771948.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Sarcophilus
harrisii]
Length = 305
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 94/161 (58%), Gaps = 3/161 (1%)
Query: 2 EKDMCKNDG--EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH- 58
E C G E RVLE YSGIGGM +L + VSA+VV A D+N AN+VY+ NF H
Sbjct: 38 EACTCSPGGAREPLRVLELYSGIGGMHQALKDSSVSAEVVAAIDVNTIANEVYKHNFPHT 97
Query: 59 RPYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTV 118
+ + I+ +T E + + L+SPPCQP+TR GLQ +D R SFL IL ++P
Sbjct: 98 QLWAKTIEGITLQEFNQLSFNMILMSPPCQPFTRIGLQGDVTDPRTKSFLHILRILPRLQ 157
Query: 119 KPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSP 159
K P + +ENV GFE S ++ L N + QEF+LSP
Sbjct: 158 KLPKYILLENVKGFEVSSARDLFVQTLENCGFKYQEFLLSP 198
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 59/96 (61%), Gaps = 13/96 (13%)
Query: 305 SYYRYVKGTGSLLAT---VQPKN----------KGKASSLKEQHLRYFTPREVANLHSFP 351
+Y YV+GTGS+L T +Q +N + K L LRYFTPRE+ANLH FP
Sbjct: 210 NYGTYVEGTGSVLQTAEDIQIENVYTSLETLSEEEKLMKLSMLKLRYFTPREIANLHGFP 269
Query: 352 GDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
+F FP L+++Q Y LLGNSL++ VV+ L++ L
Sbjct: 270 PEFGFPEKLTMKQCYRLLGNSLNVHVVSKLIRTLLG 305
>gi|194861352|ref|XP_001969765.1| GG23765 [Drosophila erecta]
gi|190661632|gb|EDV58824.1| GG23765 [Drosophila erecta]
Length = 331
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 97/154 (62%), Gaps = 2/154 (1%)
Query: 25 MRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAAELDMYGAHAWLL 83
M Y+ A + ++V A D+N AN VY N+G+ + NIQ+L+A E++ A+ L+
Sbjct: 1 MHYAFKYAQLDGEIVAALDVNTVANAVYAHNYGNNLVKTRNIQSLSAKEVNKLQANVLLM 60
Query: 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 143
SPPCQPYTRQGLQ+ + D R+ + + LIP ++L +ENV GFE+S + IE
Sbjct: 61 SPPCQPYTRQGLQRDTEDKRSDALTHLCGLIPECQNLQYIL-MENVKGFESSQARNQFIE 119
Query: 144 ILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
L S + +EFIL+P QF VP +R RY+C+A++
Sbjct: 120 ALERSGFHWREFILTPTQFNVPNTRYRYYCIARK 153
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 74/145 (51%), Gaps = 26/145 (17%)
Query: 266 VDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS---------- 315
V+ VS D FLVP ++ + MDI++P R CFTK Y Y +GTGS
Sbjct: 185 VEENVSSD-FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAYTPLAEEES 243
Query: 316 -----LLATVQPKNKGKASS----------LKEQHLRYFTPREVANLHSFPGDFQFPHHL 360
L+ + + S L + LRYFTPREVA L SFP DF+F
Sbjct: 244 HRIFELVKEIDTNYQDAVKSEKILQQRLDLLHQVKLRYFTPREVARLMSFPEDFEFSPET 303
Query: 361 SLRQRYALLGNSLSIAVVAPLLQYL 385
+ RQ+Y LLGNS+++ VV L++ L
Sbjct: 304 TNRQKYRLLGNSINVKVVGELIKLL 328
>gi|332029105|gb|EGI69118.1| tRNA (cytosine-5-)-methyltransferase [Acromyrmex echinatior]
Length = 309
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 98/168 (58%), Gaps = 8/168 (4%)
Query: 31 KADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAAELDMYGAHAWLLSPPCQP 89
++ ++A+VV A DIN ANDVY NF NIQ++ A EL+ +SPPCQP
Sbjct: 3 ESGIAAKVVAAIDINPVANDVYHHNFPETVLMNRNIQSINAQELNKLNVDIMFMSPPCQP 62
Query: 90 YTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSD 149
+TR GL+K + D R+ S IL L+P +K + +ENV GFE S +++E + +
Sbjct: 63 FTRLGLKKDAFDNRSCSLKHILNLLPE-LKNLKYILLENVKGFEVSQMRDELVECIKSCG 121
Query: 150 YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF------RCQLLNNQL 191
Y+ +E ILSP QFG+P SR RY+ LAKR L F C LNN L
Sbjct: 122 YVYRELILSPCQFGMPNSRYRYYLLAKRNNLKFCFKQSSLCYTLNNIL 169
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 15/129 (11%)
Query: 275 FLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSL---------------LAT 319
+LVP L+++ +DI +S CCFTK Y Y +GTGS+ +
Sbjct: 177 YLVPSKLLQKRARILDIRTSESNGSCCFTKGYSYYAEGTGSVYCPFTDEIIKSKYNEITN 236
Query: 320 VQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVA 379
+ + + L + LR+F+P+E+ L FP DF FP H++ RQ+Y LLGNS++I VV+
Sbjct: 237 YENDSNKQMQILSDLKLRFFSPKEICRLMCFPEDFHFPEHITDRQKYRLLGNSINIHVVS 296
Query: 380 PLLQYLFAQ 388
L+ L +
Sbjct: 297 RLILLLCTE 305
>gi|170084905|ref|XP_001873676.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651228|gb|EDR15468.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 330
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 105/172 (61%), Gaps = 5/172 (2%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
R LEFY GIGG+ ++L ++ + VV AFD + A VY+ N + +I L AA+L
Sbjct: 4 RALEFYCGIGGLHFALSRSSLGGTVVRAFDWDQCACRVYKANHSNIVTNVDISTLVAADL 63
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQ-KQSSDARAFSFLKILE-LIPH---TVKPPHMLFVEN 128
A WLLSP CQPYT + K +SD RA SFL +++ ++P T + P L VEN
Sbjct: 64 AALKADLWLLSPACQPYTILNPKAKDASDPRAQSFLHLIQNVLPELGSTNQHPQRLLVEN 123
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
V GFETS T ++ IL + Y T E +L+PLQFG+P SR RY+ LAK+ PL
Sbjct: 124 VAGFETSTTRQILVSILHSLGYSTLELLLTPLQFGIPNSRLRYYLLAKKAPL 175
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 17/135 (12%)
Query: 266 VDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT-----V 320
+DR FLVP ++++WG DIV P S+R CCFT+ Y + V+ +GS+L V
Sbjct: 197 LDRGYDPQEFLVPDKILKKWGRLFDIVLPSSRRTCCFTRGYTQLVERSGSVLQNNEILDV 256
Query: 321 QPKNKGKASSLKEQHLRYFTPREVANLHSFPG---------DFQFPHHLSLRQRYALLGN 371
QP+ L LRYF+P E+ + F F +P +S + +Y L+GN
Sbjct: 257 QPE---AVKILHPLGLRYFSPEELLRIFDFNSCDPRADLEPAFHWPDDISTKTKYRLIGN 313
Query: 372 SLSIAVVAPLLQYLF 386
S++I V+ L+ YLF
Sbjct: 314 SVNIRVIQELIDYLF 328
>gi|195387886|ref|XP_002052623.1| GJ17650 [Drosophila virilis]
gi|194149080|gb|EDW64778.1| GJ17650 [Drosophila virilis]
Length = 332
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 25 MRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAAELDMYGAHAWLL 83
M Y+ A + +VV A D+N AN VY N+G + NIQ+L+ E+ GA+ L+
Sbjct: 1 MHYAFKYAQLPGEVVAALDVNTVANAVYAHNYGSTKVKTRNIQSLSEKEVTKLGANMLLM 60
Query: 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 143
SPPCQP+TRQGLQ+ D R+ + + LIP ++L +ENV GFE S + IE
Sbjct: 61 SPPCQPHTRQGLQRDVDDKRSCALSHLCSLIPQCETLEYVL-MENVKGFEGSQARKQFIE 119
Query: 144 ILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
L + Y +EFIL+P QF VP +R RY+C+A++
Sbjct: 120 ALEKAGYHWREFILTPTQFNVPNTRHRYYCIARK 153
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 71/137 (51%), Gaps = 30/137 (21%)
Query: 276 LVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASS----- 330
LVP ++ + MDI++P R CFTK Y Y +GTGS P ++ ++ S
Sbjct: 196 LVPDDVLTKRVLVMDIIHPSQSRSMCFTKGYTHYTEGTGSAFT---PLSEAESHSIFEAV 252
Query: 331 ----------------------LKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYAL 368
L+E LRYFTPREVA L SFP DF+FP + RQRY L
Sbjct: 253 KEIDMDPNSTNCEAAQHRRLELLREVKLRYFTPREVARLMSFPEDFEFPAETTNRQRYRL 312
Query: 369 LGNSLSIAVVAPLLQYL 385
LGNS+++ VV LL+ L
Sbjct: 313 LGNSINVCVVGELLKLL 329
>gi|324516189|gb|ADY46452.1| tRNA (cytosine-5-)-methyltransferase [Ascaris suum]
Length = 193
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 93/160 (58%), Gaps = 1/160 (0%)
Query: 4 DMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQ 62
D+ A R LE +SGIGG Y+L ++ +++ AFDIND AN +Y+ NF +Q
Sbjct: 3 DVALTQPAALRCLELFSGIGGFHYALKESGTRFEMLAAFDINDVANAIYKHNFPCTTVHQ 62
Query: 63 GNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH 122
NIQ LT+ D A W +SPPCQP+T++G+Q+ D R + ++I + +PP
Sbjct: 63 CNIQALTSEFYDRQCADLWTMSPPCQPFTKKGMQRDVDDRRCDALMRICTALERMHEPPR 122
Query: 123 MLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQF 162
+F+ENV GFETS H+ +E+LA Y Q L LQ+
Sbjct: 123 FIFLENVCGFETSTAHSIFVEVLAKLHYHMQVRNLYYLQW 162
>gi|195443002|ref|XP_002069228.1| GK21086 [Drosophila willistoni]
gi|194165313|gb|EDW80214.1| GK21086 [Drosophila willistoni]
Length = 221
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 119/213 (55%), Gaps = 12/213 (5%)
Query: 25 MRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY--QGNIQNLTAAELDMYGAHAWL 82
M Y+ + +VV A D+N AN VY N+ + Y NIQ+L+ E++ A+ L
Sbjct: 1 MHYAFNYTKLQGEVVAAMDVNTVANKVYAHNYKNPKYLKTRNIQSLSEKEVNKLNANMLL 60
Query: 83 LSPPCQPYTRQGLQKQSSDARAFSFLKILELIP--HTVKPPHMLFVENVVGFETSDTHAK 140
+SPPCQP+TRQGLQ+ + D R+ + ++ L+P T+K + +ENV GFE S +
Sbjct: 61 MSPPCQPHTRQGLQRDTEDKRSSALNQLCSLLPKCETIK---YILMENVKGFECSQARQQ 117
Query: 141 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR-KPLSFRCQLLNNQLL-RSPSPL 198
IE L + + +EFIL+P QF VP +R RY+CLA++ K F + Q+ ++P P
Sbjct: 118 FIEALQQAKFYWREFILTPTQFQVPNTRYRYYCLARKDKDFDFPSGKIWEQMPGQAPHP- 176
Query: 199 LGNDDMTVITKHDQPDDSWDKLLESCDPVERFL 231
++M I+ +P S + L D ++R L
Sbjct: 177 --TNEMDTISSLLEPSISTSEFLVPDDVLKRVL 207
>gi|242024278|ref|XP_002432555.1| Modification methylase HaeIII, putative [Pediculus humanus
corporis]
gi|212518015|gb|EEB19817.1| Modification methylase HaeIII, putative [Pediculus humanus
corporis]
Length = 267
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 100/159 (62%), Gaps = 8/159 (5%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAA 71
V+E YSGIGGM ++L ++ + +VV+A DIN AN+VY+LNF G NIQ+L
Sbjct: 1 MNVIELYSGIGGMHFALKESGIDYKVVKAVDINTTANEVYKLNFPKTLLLGKNIQSLQLE 60
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS--FLKILELIPHTVKPPHMLFVENV 129
D G L+SPPCQP+TR GL++ + D R+ S +L L H+V + + +ENV
Sbjct: 61 --DFNGIDMILMSPPCQPHTRNGLKRDNLDERSHSLLYLLTLLPKLHSV---NYILLENV 115
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSR 168
GFE S ++++IL +S Y QEF+L+P QFG+P SR
Sbjct: 116 KGFEISRIRDELVDILISSGYTYQEFLLTPTQFGIPNSR 154
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 36/50 (72%)
Query: 338 YFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
YFTP+E++ L FP FP++ + +Q+Y LLGNS+++ VV+ L++ L +
Sbjct: 218 YFTPKEISKLMCFPDSLIFPNYFTKKQKYRLLGNSVNVHVVSILIKLLVS 267
>gi|17137742|ref|NP_477475.1| methyltransferase 2, isoform A [Drosophila melanogaster]
gi|7297918|gb|AAF53163.1| methyltransferase 2, isoform A [Drosophila melanogaster]
Length = 345
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 94/152 (61%), Gaps = 2/152 (1%)
Query: 27 YSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAAELDMYGAHAWLLSP 85
Y+ A + Q+V A D+N AN VY N+G + NIQ+L+ E+ A+ L+SP
Sbjct: 17 YTFEDAQLDGQIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLSVKEVTKLQANMLLMSP 76
Query: 86 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 145
PCQP+TRQGLQ+ + D R+ + + LIP + ++L +ENV GFE+S + IE L
Sbjct: 77 PCQPHTRQGLQRDTEDKRSDALTHLCGLIPECQELEYIL-MENVKGFESSQARNQFIESL 135
Query: 146 ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
S + +EFIL+P QF VP +R RY+C+A++
Sbjct: 136 ERSGFHWREFILTPTQFNVPNTRYRYYCIARK 167
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 77/145 (53%), Gaps = 26/145 (17%)
Query: 266 VDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS---------- 315
V+ VS D FLVP ++ + MDI++P R CFTK Y Y +GTGS
Sbjct: 199 VEENVSPD-FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAYTPLSEDES 257
Query: 316 -----LLATVQPKNKGKASS----------LKEQHLRYFTPREVANLHSFPGDFQFPHHL 360
L+ + N+ + S L + LRYFTPREVA L SFP +F+FP
Sbjct: 258 HRIFELVKEIDTSNQDASKSEKILQQRLDLLHQVRLRYFTPREVARLMSFPENFEFPPET 317
Query: 361 SLRQRYALLGNSLSIAVVAPLLQYL 385
+ RQ+Y LLGNS+++ VV L++ L
Sbjct: 318 TNRQKYRLLGNSINVKVVGELIKLL 342
>gi|409910784|ref|YP_006889249.1| DNA methyltransferase [Geobacter sulfurreducens KN400]
gi|298504342|gb|ADI83065.1| DNA methyltransferase, putative [Geobacter sulfurreducens KN400]
Length = 305
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 95/171 (55%), Gaps = 5/171 (2%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQNLTAAE 72
R +E + GIGG ++ V VV A D +D A Y LNF GH + +++ ++A E
Sbjct: 2 RAVELFCGIGGFAAAVEGTGV--HVVAALDQDDAALATYRLNFPGHGARKVDLERVSAWE 59
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP--PHMLFVENVV 130
L G W LSPPCQPY +G+++ +D RA S + IL+L P L +ENV
Sbjct: 60 LTAGGVDLWWLSPPCQPYCERGVRRDLADPRARSLVHILDLAARMSDEALPRHLALENVA 119
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
GF S+ H ++ E+LA Y QE +L P + G+P RPRY+ A R+ L+
Sbjct: 120 GFVGSEAHGRLTEVLALRGYRLQERLLCPTELGIPSRRPRYYLAASRQALA 170
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 15/114 (13%)
Query: 274 HFLVPLSLIERWGSAMDIVYP-DSKR-CCCFTKSYYRYVKGTGSLLATVQPKNKGKASSL 331
L+ S++ER+G+ I+ P DS CFT Y R + +G+ L N G
Sbjct: 198 ELLLSPSIVERFGAGFRILDPADSDAYTTCFTSGYGRSLTASGAYLRC----NDG----- 248
Query: 332 KEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
+R F+P E+A L FP F+FP + LR+R+ L+GNSLS+A V +L+ L
Sbjct: 249 ----VRRFSPEEIARLLHFPPSFRFPEEVPLRKRWQLVGNSLSVAAVREVLRAL 298
>gi|209875617|ref|XP_002139251.1| DNA (cytosine-5)-methyltransferase domain-containing protein
[Cryptosporidium muris RN66]
gi|209554857|gb|EEA04902.1| DNA (cytosine-5)-methyltransferase domain-containing protein
[Cryptosporidium muris RN66]
Length = 422
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 189/413 (45%), Gaps = 50/413 (12%)
Query: 21 GIGGMRYSLMKA---------DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
GIGG+ SL A + +V++AF++N+ N++Y+ +F + Q +++ +
Sbjct: 9 GIGGLHLSLKYAIEKLVEHGQAIDIKVIKAFELNENCNNIYKRHF--KDTQVCTKSIESL 66
Query: 72 ELD-MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELI--PHTVKPPHMLFVEN 128
+D + A+ WLL P CQP+TR G ++ S D R LKI++L+ P + F+EN
Sbjct: 67 NIDDIPKANIWLLGP-CQPFTRGGAKRDSDDNRCKPLLKIIDLMYKIDVSNMPSIWFIEN 125
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR-KPLSFRCQ-- 185
VV FE S TH MI++ + DY +F+LSP +P +R RY+C+A R L C+
Sbjct: 126 VVNFEQSRTHKFMIDMFNDLDYTYIQFLLSPTLLNIPNTRVRYYCMAFRCSNLVLSCKYS 185
Query: 186 -------LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFL------E 232
+ + +LR+ + +I Q ++D+LL +F
Sbjct: 186 ILSRYENFIASNILRNNCKGTKKLEYKLIINDPQNKSTYDELLCHLPYSSKFCYKLLHSH 245
Query: 233 FSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWG------ 286
GD + T L + A ++ +SI + S IE G
Sbjct: 246 PKKIGDIIYTAKSSLFSEVANKVIERNNSFRFDIVNELSIVSTTITRSYIESAGRGEPLF 305
Query: 287 ----SAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL-ATVQPKNKGKASSLKEQHLRYFTP 341
+ + Y + C S Y+ + T L + Q N+ L + ++R+ P
Sbjct: 306 MKSSNVDNTKYINEYLSCDEPSSVYKQIFDTSKLCPSRFQCINE---IDLSKCNIRFLQP 362
Query: 342 REVANLHSFPGD-----FQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQA 389
E+ +L FP + +++ L+Q+Y+L+GNS+SI +V+ L+ Y+ A
Sbjct: 363 SEILSLMGFPSNWLSAIYKYDSLEFLKQQYSLIGNSISIHIVSILMYYMIDLA 415
>gi|418066940|ref|ZP_12704295.1| C-5 cytosine-specific DNA methylase [Geobacter metallireducens
RCH3]
gi|373559652|gb|EHP85941.1| C-5 cytosine-specific DNA methylase [Geobacter metallireducens
RCH3]
Length = 330
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 95/168 (56%), Gaps = 7/168 (4%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQNLTAAE 72
R LE + GIGG ++ +V ++V AFD + A D Y LNF GH + +++ ++A E
Sbjct: 27 RTLELFCGIGGFSAAVEGGNV--RIVGAFDQDPAALDTYRLNFPGHGARKVDLERVSAWE 84
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILEL---IPHTVKPPHMLFVENV 129
L G W LSPPCQPY +G ++ +D RA S + ILEL IP + P H L +ENV
Sbjct: 85 LTAGGVDLWWLSPPCQPYCERGARRDLADPRARSLVHILELLERIPDDLLPRH-LALENV 143
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
GF S+ H + E+L + + +E L P + G P RPRY+ A R
Sbjct: 144 AGFVGSEGHGLLTEVLTSRGFQVRERFLCPTELGAPMRRPRYYLAASR 191
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 15/112 (13%)
Query: 274 HFLVPLSLIERWGSAMDIVYPDSKRCC--CFTKSYYRYVKGTGSLLATVQPKNKGKASSL 331
L+ ++ R+G A+ I+ C CFT Y R + GS L
Sbjct: 223 ELLLSPDVVARFGGALPILDSGDGSACATCFTAGYGRSITSAGSYLQCAS---------- 272
Query: 332 KEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQ 383
+R+F+P E+ +FP F+FP + LR+R+ L+GNSLS+A V +L+
Sbjct: 273 ---GVRHFSPEEIVRFMAFPEGFRFPDEVPLRKRWHLIGNSLSVAAVREVLR 321
>gi|404495112|ref|YP_006719218.1| DNA methyltransferase [Geobacter metallireducens GS-15]
gi|403377942|gb|ABB30500.2| DNA methyltransferase, putative [Geobacter metallireducens GS-15]
Length = 311
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 95/168 (56%), Gaps = 7/168 (4%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQNLTAAE 72
R LE + GIGG ++ +V ++V AFD + A D Y LNF GH + +++ ++A E
Sbjct: 8 RTLELFCGIGGFSAAVEGGNV--RIVGAFDQDPAALDTYRLNFPGHGARKVDLERVSAWE 65
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILEL---IPHTVKPPHMLFVENV 129
L G W LSPPCQPY +G ++ +D RA S + ILEL IP + P H L +ENV
Sbjct: 66 LTAGGVDLWWLSPPCQPYCERGARRDLADPRARSLVHILELLERIPDDLLPRH-LALENV 124
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
GF S+ H + E+L + + +E L P + G P RPRY+ A R
Sbjct: 125 AGFVGSEGHGLLTEVLTSRGFQVRERFLCPTELGAPMRRPRYYLAASR 172
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 15/112 (13%)
Query: 274 HFLVPLSLIERWGSAMDIVYPDSKRCC--CFTKSYYRYVKGTGSLLATVQPKNKGKASSL 331
L+ ++ R+G A+ I+ C CFT Y R + GS L
Sbjct: 204 ELLLSPDVVARFGGALPILDSGDGSACATCFTAGYGRSITSAGSYLQCAS---------- 253
Query: 332 KEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQ 383
+R+F+P E+ +FP F+FP + LR+R+ L+GNSLS+A V +L+
Sbjct: 254 ---GVRHFSPEEIVRFMAFPEGFRFPDEVPLRKRWHLIGNSLSVAAVREVLR 302
>gi|412986361|emb|CCO14787.1| tRNA (cytosine-5-)-methyltransferase [Bathycoccus prasinos]
Length = 443
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 102/194 (52%), Gaps = 25/194 (12%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADV---SAQVVEAFDINDKANDVYELNFGH-----RPYQG 63
+ V+E +SGIGGMR +L +A+V S A D N AN VY+ NF + R +G
Sbjct: 74 VFEVVELFSGIGGMRLALERANVFNKSEVHFTAIDNNCNANAVYKANFMNLSSETRVLEG 133
Query: 64 NIQNLTAAEL---DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELI------ 114
NI++ L + G LSPPCQPYTR+G + DAR+ + +I+++
Sbjct: 134 NIESFDVERLLASSVDGCEILTLSPPCQPYTRKGKNRGEKDARSTALARIIDIFEDAGEE 193
Query: 115 ------PHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFI-LSP-LQFGVPY 166
T P + +ENVVGFE + IE L ++Y +EF+ LSP GVP
Sbjct: 194 KEESVGTRTTALPKRILLENVVGFELGTERERFIEALKKNEYHVKEFVGLSPETMLGVPV 253
Query: 167 SRPRYFCLAKRKPL 180
RPRY+ LA+RK L
Sbjct: 254 KRPRYYLLARRKEL 267
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 334 QHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
+ +RYF+P E+ LH DF FP LS+RQ+Y L+GN +S+ VVA LL+YLF
Sbjct: 390 KSVRYFSPTELCRLHGIKDDFVFPPSLSMRQQYKLIGNGISVHVVAKLLEYLF 442
>gi|195114574|ref|XP_002001842.1| GI17066 [Drosophila mojavensis]
gi|193912417|gb|EDW11284.1| GI17066 [Drosophila mojavensis]
Length = 331
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 25 MRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAAELDMYGAHAWLL 83
M Y+ A +S +VV A D+N AN VY N+G + NIQ+L E+ A+ L+
Sbjct: 1 MHYAFKYAQLSGEVVAAMDVNTVANAVYAHNYGATSVKTRNIQSLAEKEIKKLNANMLLM 60
Query: 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 143
SPPCQP+TRQGLQ+ D R+ + + LIP ++L +ENV GFE S + IE
Sbjct: 61 SPPCQPHTRQGLQRDVEDKRSCALAHLCLLIPQCDTLEYVL-MENVKGFEVSQARQQFIE 119
Query: 144 ILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
L + + +E IL+P QF VP +R RY+C+A++
Sbjct: 120 ALDKAGFHWRELILTPTQFKVPNTRHRYYCIARK 153
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 71/137 (51%), Gaps = 24/137 (17%)
Query: 273 DHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLA-------------- 318
D FLVP ++ + MDI++P R CFTK Y Y +GTGS+
Sbjct: 193 DDFLVPDDVLSKRVLVMDIIHPSQSRSMCFTKGYTHYTEGTGSVFTPLSEAQSHSIFEAV 252
Query: 319 ---TVQPKNKGKASS-------LKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYAL 368
+ P +K + L+ LRYFTPREVA L SFP +F+FP RQ+Y L
Sbjct: 253 KQIDMDPNSKDSEEAQQRRLELLRRVKLRYFTPREVARLMSFPEEFEFPPETKNRQKYRL 312
Query: 369 LGNSLSIAVVAPLLQYL 385
LGNS+++ VV LL+ L
Sbjct: 313 LGNSINVCVVGELLKLL 329
>gi|167539782|ref|XP_001741349.1| DNA (cytosine-5)-methyltransferase [Entamoeba dispar SAW760]
gi|165894050|gb|EDR22134.1| DNA (cytosine-5)-methyltransferase, putative [Entamoeba dispar
SAW760]
Length = 322
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 98/178 (55%), Gaps = 6/178 (3%)
Query: 14 RVLEFYSGIGGMR--YSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
RV+EF+SGIGG+R Y ++SA + FDIN+ AN +Y NF N+ +++
Sbjct: 7 RVIEFFSGIGGLRSSYEHSSINISATFI-PFDINEIANKIYSKNFKEEVQVKNLDSISIK 65
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQS--SDARAFSFLKIL-ELIPHTVKPPHMLFVEN 128
+++ + W +SPPCQPY + K +D RA S L + +++P + P +F+EN
Sbjct: 66 QIESLNCNTWFMSPPCQPYNTSIMSKHKDINDPRAKSVLHLYRDILPFLINKPTHIFIEN 125
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
V F+ S ++ IL + Y ++ I SP+ G+P SR RY+ +A+ P QL
Sbjct: 126 VPLFKESLVFKEIYNILIKNQYYIKDIICSPIDIGIPNSRTRYYVMARLTPFKNEIQL 183
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 72/118 (61%), Gaps = 3/118 (2%)
Query: 273 DHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPK--NKGKASS 330
+ + +P LI + G DIV D KR CCFTKSY + V+GTGS+ ++ KA +
Sbjct: 201 ESYYIPSDLILKKGMLFDIVGKDDKRTCCFTKSYTKIVEGTGSIYCPIESHFIPVKKAEN 260
Query: 331 LKEQHLRYFTPREVANLHSFPGDFQFP-HHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
L ++LRYFTP E+ +H F +F ++ +Q+Y LGNS+S V+A L++YLF+
Sbjct: 261 LLNKNLRYFTPNEIKKIHGFSSEFTTQVDGITDKQQYQCLGNSVSCFVIAQLMEYLFS 318
>gi|195035415|ref|XP_001989173.1| GH11576 [Drosophila grimshawi]
gi|193905173|gb|EDW04040.1| GH11576 [Drosophila grimshawi]
Length = 327
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 25 MRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAAELDMYGAHAWLL 83
M Y+ A + +VV A D+N AN VY N+G + NIQ+L+ E+ A+ L+
Sbjct: 1 MHYAFKYAQLPGEVVAALDVNTVANAVYVHNYGTTHLKTRNIQSLSEKEVRQLNANVLLM 60
Query: 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 143
SPPCQP+TRQGLQ+ D R+ + + L+P ++L +ENV GFE S + IE
Sbjct: 61 SPPCQPHTRQGLQRDVDDKRSCALSHLCCLLPFCETLDYVL-MENVKGFEASQARQQFIE 119
Query: 144 ILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
L + + +EFIL+P QF VP +R RY+C+A++
Sbjct: 120 ALEKAGFHWREFILTPTQFSVPNTRYRYYCIARK 153
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 70/135 (51%), Gaps = 25/135 (18%)
Query: 273 DHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLK 332
D LVP ++ + MDI++P R CFTK Y Y +GTGS P ++ +A S+
Sbjct: 194 DETLVPDDVLSKRVLVMDIIHPSQSRSMCFTKGYTHYTEGTGSAFT---PLSEEQAHSIF 250
Query: 333 E----------------------QHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLG 370
E LRYFTPREVA L SFP F+FP + RQ+Y LLG
Sbjct: 251 EAVKQIDTGSDEAQRRRLELLRQLKLRYFTPREVARLMSFPEYFEFPAETTNRQKYRLLG 310
Query: 371 NSLSIAVVAPLLQYL 385
NS+++ VV LL+ L
Sbjct: 311 NSINVRVVGELLKLL 325
>gi|183230936|ref|XP_655267.2| DNA (cytosine-5)-methyltransferase [Entamoeba histolytica
HM-1:IMSS]
gi|45505012|gb|AAS66974.1| 5-cytosine DNA methyltransferase [Entamoeba histolytica]
gi|169802689|gb|EAL49892.2| DNA (cytosine-5)-methyltransferase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449702632|gb|EMD43233.1| DNA (cytosine5)-methyltransferase, putative [Entamoeba histolytica
KU27]
Length = 322
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 97/176 (55%), Gaps = 4/176 (2%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVV-EAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
V+EF+SGIGG+R S ++ ++ FDIN+ AN +Y NF N+ +++ ++
Sbjct: 8 VIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEEVQVKNLDSISIKQI 67
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQS--SDARAFSFLKIL-ELIPHTVKPPHMLFVENVV 130
+ + W +SPPCQPY + K +D RA S L + +++P+ + P +F+ENV
Sbjct: 68 ESLNCNTWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVP 127
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
F+ S ++ IL + Y ++ I SP+ G+P SR RY+ +A+ P QL
Sbjct: 128 LFKESLVFKEIYNILIKNQYYIKDIICSPIDIGIPNSRTRYYVMARLTPFKNEIQL 183
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 71/117 (60%), Gaps = 3/117 (2%)
Query: 273 DHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPK--NKGKASS 330
+ + +P LI + G DIV D KR CCFTKSY + V+GTGS+ ++P KA
Sbjct: 201 ESYSIPSDLILKKGMLFDIVGKDDKRTCCFTKSYTKIVEGTGSIYCPIEPHFIPVKKAED 260
Query: 331 LKEQHLRYFTPREVANLHSFPGDFQFP-HHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
L ++LRYFTP E+ +H F +F L+ +Q+Y LGNS+S V+A L++YLF
Sbjct: 261 LLNKNLRYFTPNEIKKIHGFSSNFTTQIDGLTDKQQYQCLGNSVSCFVIAQLMEYLF 317
>gi|383875353|pdb|3QV2|A Chain A, Structure Analysis Of Entamoeba Histolytica
Methyltransferase Ehmeth
Length = 327
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 97/176 (55%), Gaps = 4/176 (2%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVV-EAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
V+EF+SGIGG+R S ++ ++ FDIN+ AN +Y NF N+ +++ ++
Sbjct: 13 VIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEEVQVKNLDSISIKQI 72
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQS--SDARAFSFLKIL-ELIPHTVKPPHMLFVENVV 130
+ + W +SPPCQPY + K +D RA S L + +++P+ + P +F+ENV
Sbjct: 73 ESLNCNTWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVP 132
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
F+ S ++ IL + Y ++ I SP+ G+P SR RY+ +A+ P QL
Sbjct: 133 LFKESLVFKEIYNILIKNQYYIKDIICSPIDIGIPNSRTRYYVMARLTPFKNEIQL 188
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 71/117 (60%), Gaps = 3/117 (2%)
Query: 273 DHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPK--NKGKASS 330
+ + +P LI + G DIV D KR CCFTKSY + V+GTGS+ ++P KA
Sbjct: 206 ESYSIPSDLILKKGMLFDIVGKDDKRTCCFTKSYTKIVEGTGSIYCPIEPHFIPVKKAED 265
Query: 331 LKEQHLRYFTPREVANLHSFPGDFQFP-HHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
L ++LRYFTP E+ +H F +F L+ +Q+Y LGNS+S V+A L++YLF
Sbjct: 266 LLNKNLRYFTPNEIKKIHGFSSNFTTQIDGLTDKQQYQCLGNSVSCFVIAQLMEYLF 322
>gi|302843860|ref|XP_002953471.1| hypothetical protein VOLCADRAFT_63767 [Volvox carteri f.
nagariensis]
gi|300261230|gb|EFJ45444.1| hypothetical protein VOLCADRAFT_63767 [Volvox carteri f.
nagariensis]
Length = 302
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 78/120 (65%), Gaps = 5/120 (4%)
Query: 68 LTAAELD-MYGAHAWLLSPPCQPYT--RQGLQKQSSDARAFSFLKILE--LIPHTVKPPH 122
+TA++LD A WLL+PPCQPYT ++ ++D RA S L ++ ++P +PP
Sbjct: 1 VTASQLDEQLAADLWLLTPPCQPYTTTSNARRRDTADPRAASLLHLMSPAVLPAMQRPPT 60
Query: 123 MLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
L +ENV GF SD+H M+ L + Y QEFI+SP Q GVPYSRPRYF LA R+PLSF
Sbjct: 61 RLMMENVPGFVGSDSHKMMVAALGTAGYELQEFIVSPHQLGVPYSRPRYFALAVRRPLSF 120
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 275 FLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKA-SSLKE 333
+ V + + R+ +D+V P S C CFTK Y + GS+LA+ G+A +
Sbjct: 184 YAVSAAQLARFWRVLDVVTPSSTYCNCFTKHYTDNLLAAGSVLASEDFAEPGEAHAEAVV 243
Query: 334 QHLRYFTPREVANLHSFPGDFQFPHH---LSLRQRYALLGNSLSIAVVAPLLQYLF 386
LR+F+P EVA +H D+ L RQ+YALLGN LS+ V + LL YL
Sbjct: 244 LGLRFFSPDEVAAIHGVRADWAARARAAGLQPRQQYALLGNGLSVDVASYLLTYLL 299
>gi|407040168|gb|EKE39997.1| DNA (cytosine-5)-methyltransferase, putative [Entamoeba nuttalli
P19]
Length = 330
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 96/176 (54%), Gaps = 4/176 (2%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVV-EAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
V+EF+SGIGG+R S ++ ++ FDIN+ AN +Y NF N+ +++ ++
Sbjct: 16 VIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEEVQVKNLDSISIKQI 75
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQS--SDARAFSFLKIL-ELIPHTVKPPHMLFVENVV 130
+ + W +SPPCQPY + K +D RA S L + +++P+ P +F+ENV
Sbjct: 76 ESLNCNTWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLTNKPTHIFIENVP 135
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
F+ S ++ IL + Y ++ I SP+ G+P SR RY+ +A+ P QL
Sbjct: 136 LFKESLVFKEIYNILIKNQYYIKDIICSPIDIGIPNSRTRYYVMARLTPFKNDIQL 191
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 71/117 (60%), Gaps = 3/117 (2%)
Query: 273 DHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPK--NKGKASS 330
+ + +P LI + G DIV D KR CCFTKSY + V+GTGS+ ++P KA
Sbjct: 209 ESYYIPSDLILKKGMLFDIVGKDDKRTCCFTKSYTKIVEGTGSIYCPIEPHFIPVKKAED 268
Query: 331 LKEQHLRYFTPREVANLHSFPGDFQFP-HHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
L ++LRYFTP E+ +H F +F L+ +Q+Y LGNS+S V+A L++YLF
Sbjct: 269 LLNKNLRYFTPNEIKKIHGFSSNFTTQIDGLTDKQQYQCLGNSVSCFVIAQLMEYLF 325
>gi|295646363|gb|ADG23067.1| DNA (cytosine-5)-methyltransferase 2 [Gadus morhua]
Length = 139
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 79/137 (57%), Gaps = 1/137 (0%)
Query: 41 AFDINDKANDVYELNFGHRP-YQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQS 99
A D+N AN++Y NF P + I+ ++ E + L+SPPCQP+TR GLQ +
Sbjct: 2 AIDVNTTANEIYRHNFPDTPLWPKTIEGISLEEFNKLSFDMILMSPPCQPFTRIGLQGDT 61
Query: 100 SDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSP 159
SD R SFL IL+L+P P + +ENV GFETS ++ L + Y QE ++SP
Sbjct: 62 SDPRTKSFLYILDLLPRLAVLPRFILLENVKGFETSSARDSLLNTLRDCGYTFQEILVSP 121
Query: 160 LQFGVPYSRPRYFCLAK 176
G+P SR RYF +AK
Sbjct: 122 TSLGIPNSRLRYFLIAK 138
>gi|50841408|gb|AAT84068.1| 5-cytosine DNA methyltransferase [Entamoeba invadens]
gi|440292743|gb|ELP85927.1| methyltransferase, putative [Entamoeba invadens IP1]
Length = 324
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 97/178 (54%), Gaps = 4/178 (2%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVE-AFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
R+LEF+SGIGG+R SL ++ V A DIN+ AN +YE N+ + N+ ++
Sbjct: 10 RILEFFSGIGGLRASLERSKVHTNTTFCAIDINEIANTIYEGNYKEKVVVKNLDTVSVEW 69
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQS--SDARAFSFLKIL-ELIPHTVKPPHMLFVENV 129
++ A+ W +SPPCQPY + K D RA S L + +++ + P +F+ENV
Sbjct: 70 IEEKRANVWFMSPPCQPYNNSIMSKHKDIDDPRAKSVLHLYRDVLKNMENKPEHIFIENV 129
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 187
F+ S ++ +L +Y Q+ ++SP Q G+P SR RY+ +A++ C +
Sbjct: 130 PLFKESLVFKDIMCVLNELEYHIQDIVISPHQIGIPNSRTRYYVMARKTKFETPCTFV 187
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 242 TETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCC 301
T F+ +V F E TV+V+ F V L+ + G DIV S+R CC
Sbjct: 182 TPCTFVKYENVSVSTF--LENTVDVN-------FEVKKELLLKKGMLFDIVGVKSQRTCC 232
Query: 302 FTKSYYRYVKGTGSLLA--TVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFP-H 358
FTKSY + V+GTGS+LA ++ KA L HLRYFTP E+ +H FP F
Sbjct: 233 FTKSYTKIVEGTGSILAPQVDTFESVKKAEDLLNLHLRYFTPTEIKRIHGFPETFTTNVA 292
Query: 359 HLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
+S + +Y LGNS+S V++ L+++LF+
Sbjct: 293 GVSEKGQYQCLGNSVSCYVISQLMEHLFS 321
>gi|353234718|emb|CCA66740.1| hypothetical protein PIIN_00421 [Piriformospora indica DSM 11827]
Length = 241
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 125/284 (44%), Gaps = 78/284 (27%)
Query: 121 PHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
P + VENV GFETS T + +L Y T EF+L+P Q+G+P SR RY+ +A+ P
Sbjct: 15 PTYILVENVAGFETSTTRTSINRLLHELGYHTTEFLLTPRQYGIPNSRLRYYLMARLIPF 74
Query: 181 SFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQV 240
+ SP LG + C P GD
Sbjct: 75 TV-------------SPDLG--------------------ILRCLP----------GDN- 90
Query: 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 300
T ++ + + D T DR ++ RWG DIVYP S C
Sbjct: 91 ---THYIPSTISDYLDKNIDPHTAISDRVLA------------RWGRLFDIVYPSSTNSC 135
Query: 301 CFTKSYYRYVKGTGSLL-------------ATVQPKNKGKASSLKEQH---LRYFTPREV 344
CFT+ Y V+G+GS+L + KG+A +++ H LRYF+P E+
Sbjct: 136 CFTRGYSHLVEGSGSILQLNDALETSSVFDVYFSQQEKGEADAVQTLHQLQLRYFSPEEL 195
Query: 345 ANLH--SFPG-DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
L S P F +P H+S + +Y L+GNS+++AVV L+ +L
Sbjct: 196 LRLFHLSTPSRKFLWPEHVSRKTKYRLIGNSVNVAVVGRLITFL 239
>gi|167515786|ref|XP_001742234.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778858|gb|EDQ92472.1| predicted protein [Monosiga brevicollis MX1]
Length = 356
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 72/114 (63%)
Query: 64 NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHM 123
NIQ + +L+ A WL+SPPCQPY+RQG Q+ DAR+ SF +L+ + PP +
Sbjct: 15 NIQAVPIRQLEKLAADLWLMSPPCQPYSRQGHQRGLEDARSDSFRYLLDALTQMKNPPSV 74
Query: 124 LFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
+ VENVVGFE+S +++ L Y QEF LSP QFGVP SR RYF LA R
Sbjct: 75 ILVENVVGFESSQGREELVATLNTLQYRFQEFWLSPDQFGVPNSRLRYFLLAIR 128
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 13/106 (12%)
Query: 290 DIVYPDSKRCCCFTKSYYRYVKGTGSLLATV-------------QPKNKGKASSLKEQHL 336
DIV P+ +R CFTK Y V+GTGS+ P +++ L
Sbjct: 249 DIVRPEERRSLCFTKGYSHKVEGTGSVFQVCICVAIPMAFEQLDVPSPGAGWPAVEALEL 308
Query: 337 RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLL 382
RYFTP+E+ LH FP DF P ++ RQ +GNSL + +VA LL
Sbjct: 309 RYFTPQEMLRLHGFPTDFVIPSSVTDRQARKAIGNSLCVTIVAHLL 354
>gi|401409426|ref|XP_003884161.1| putative DNA methyltransferase 2 [Neospora caninum Liverpool]
gi|325118579|emb|CBZ54130.1| putative DNA methyltransferase 2 [Neospora caninum Liverpool]
Length = 794
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%)
Query: 78 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 137
A WLLSPPCQPYTR G ++ D RA L +L+ + PP +LF+ENV GFE S T
Sbjct: 206 ADVWLLSPPCQPYTRGGKREDLHDPRARGLLNLLDCLERLADPPKLLFLENVRGFEESQT 265
Query: 138 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
A+++++L Y +EF+LSP Q G P +R RY+CLA R
Sbjct: 266 RARLLKVLRQRAYQVEEFLLSPTQLGFPNTRVRYYCLATR 305
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 17/90 (18%)
Query: 1 MEKDMCKNDGEA--WRVLEFYSGIGGMRYSLMKAD---------------VSAQVVEAFD 43
MEK D A W+V EF+SGIGG+ +A + A V A+D
Sbjct: 49 MEKRNGDRDSRAVDWQVFEFFSGIGGLHAGWDRAVEIFNCASSAFASAVVLQAPVCRAYD 108
Query: 44 INDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+N AN VY NFG P ++++L A+ L
Sbjct: 109 VNATANQVYVHNFGLSPQHLSLEHLPASLL 138
>gi|221486626|gb|EEE24887.1| DNA methyltransferase 2, putative [Toxoplasma gondii GT1]
Length = 830
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 61/98 (62%)
Query: 77 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 136
A WLLSPPCQPYTR G ++ D RA L +L+ + PP +LF+ENV GFE S
Sbjct: 282 AADVWLLSPPCQPYTRGGKREDLHDPRARGLLHLLDCLERLKTPPKLLFLENVRGFEESQ 341
Query: 137 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 174
T +++ +L Y +EF+LSP Q G P +R RY+CL
Sbjct: 342 TRQRLLSVLKKKAYTVEEFLLSPTQLGCPNTRVRYYCL 379
>gi|237834203|ref|XP_002366399.1| DNA methyltransferase 2, putative [Toxoplasma gondii ME49]
gi|211964063|gb|EEA99258.1| DNA methyltransferase 2, putative [Toxoplasma gondii ME49]
Length = 834
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 61/98 (62%)
Query: 77 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 136
A WLLSPPCQPYTR G ++ D RA L +L+ + PP +LF+ENV GFE S
Sbjct: 282 AADVWLLSPPCQPYTRGGKREDLHDPRARGLLHLLDCLERLKTPPKLLFLENVRGFEESQ 341
Query: 137 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 174
T +++ +L Y +EF+LSP Q G P +R RY+CL
Sbjct: 342 TRQRLLSVLKKKAYTVEEFLLSPTQLGCPNTRVRYYCL 379
>gi|223999981|ref|XP_002289663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974871|gb|EED93200.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 533
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 123/550 (22%), Positives = 207/550 (37%), Gaps = 215/550 (39%)
Query: 16 LEFYSGIGGMRYSLMKA-----------------------------------------DV 34
LEFYSGIGG +++ +A +
Sbjct: 7 LEFYSGIGGWGFAMEQACRSIQSAVDLPSLLMDPTNQLVKRPKLDGSADVVGGKLPPLQL 66
Query: 35 SAQVVEAFDINDKANDVYELNFG------------------------HRPYQGNIQNLTA 70
S+Q++ A+D +D N V+ N ++P Q I+ +T
Sbjct: 67 SSQLLAAYDHSDLCNSVFMHNHASFEKSSSSVPSSSSTSKKKSKAKFYKPRQTPIERITQ 126
Query: 71 AELDMYGAHAWLLSPPCQPYTRQ--GLQKQSSDARAFSFLKILELIPHTVKP--PHMLFV 126
EL+ + A W +SPPCQP+TRQ K+ D R+ SFL + ++ + P ++ +
Sbjct: 127 QELESHSAIVWCMSPPCQPHTRQHSNQHKELEDPRSKSFLHLCHVLSVMEEDSLPCLILL 186
Query: 127 ENVVGFETS------------------DTHAKMIE----------------ILANSDYLT 152
ENVVGFE S D H + +LA +Y
Sbjct: 187 ENVVGFERSWMSACATADASSGDSNEADQHQPSTQQSQESEPSGSFQMWRKVLAQREYQV 246
Query: 153 QEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTV---ITK 209
F L P F +P +RPRY+C+A FR L +L++S GND++ + + K
Sbjct: 247 GHFHLDPTHFRLPNNRPRYYCVA------FRRGSLQARLMKS-----GNDNIRMGFNVKK 295
Query: 210 HDQPDDSWDKLLESC--DPV---ERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETV 264
H+ +ES +PV E+ ++ + + FL D + ++++
Sbjct: 296 HNL------FTIESLSNEPVIHTEKSIQEYHVVPTIPNIKSFLDA------DISSKKQSL 343
Query: 265 EVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL------- 317
++ V + W D+V P R CFT SY ++++GTGS+L
Sbjct: 344 QIPEKVRMSS--------SAW--CFDLVTPYHLRSSCFTHSYGKFIRGTGSILYYGQLRL 393
Query: 318 --ATVQPKNKGKASSLKEQH---------------------------------------- 335
+ V ++ + S++ +H
Sbjct: 394 GDSAVGDESNSQWSTVDLKHDNKNEDENDTTIPTIDKFQLALPEERSFEEDWSAAIDWDT 453
Query: 336 -LRYFTPREVANLHSFP------GD---------------FQFPHHLSLRQRYALLGNSL 373
+RY + E+A L FP G+ F FP +++Q++ LLGNSL
Sbjct: 454 SIRYLSGTEIARLMGFPVSEPAVGEESNKSSSTDGAKMRMFSFPQSCAMKQQWKLLGNSL 513
Query: 374 SIAVVAPLLQ 383
++ V A + +
Sbjct: 514 NVRVAATVTE 523
>gi|14573295|gb|AAK68034.1| DNA methyltransferase 2b [Homo sapiens]
Length = 137
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 83/159 (52%), Gaps = 27/159 (16%)
Query: 28 SLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSPP 86
+L ++ + AQVV A D+N AN+VY+ NF H + I+ +T E D L+SPP
Sbjct: 1 ALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPP 60
Query: 87 CQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILA 146
CQP+TR LQK P + +ENV GFE S T +I+ +
Sbjct: 61 CQPFTR--LQKL----------------------PKYILLENVKGFEVSSTRDLLIQTIE 96
Query: 147 NSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFR 183
N + QEF+LSP G+P SR RYF +AK +PL F+
Sbjct: 97 NCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQ 135
>gi|397623507|gb|EJK67022.1| hypothetical protein THAOC_11993 [Thalassiosira oceanica]
Length = 502
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 100/216 (46%), Gaps = 56/216 (25%)
Query: 16 LEFYSGIGGMRYSLMKA-----------------------------------DVSAQVVE 40
LEFYSG+GG Y+L A SA+++
Sbjct: 54 LEFYSGVGGWGYALEAACRSLSASFVYDEAAASKRPRVAVSPPEPDEGGVTTQASARLLA 113
Query: 41 AFDINDKANDVYELN---FGHR--PYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQ-- 93
AFD +D N V++ N G R P Q I+ L+ EL+ Y A W LSPPCQP+TRQ
Sbjct: 114 AFDHSDLCNGVFQHNHKDIGKRCKPRQTPIERLSLDELEQYDATVWCLSPPCQPHTRQHS 173
Query: 94 GLQKQSSDARAFSFLKILELIPHTVKP--PHMLFVENVVGFETSDTHAK----------- 140
++ D R+ SFL + +L+ + P++L +ENVVGFE + A
Sbjct: 174 NQHRERDDPRSSSFLHLCDLLIEMDEDMLPNLLLLENVVGFEQNWAVADDCGRDDMGSFT 233
Query: 141 -MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
++L + Y T F L P G+P +RPR++ +A
Sbjct: 234 LWRKVLCDRQYETAHFHLDPTDVGIPNNRPRHYTVA 269
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 39/154 (25%)
Query: 270 VSIDHFLVPLSLIERWGS-AMDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT--------- 319
S++ +P + E G+ DIV P+ +R CFT SY ++++GTGS+L T
Sbjct: 341 ASLEQLRIPKKIRESSGAWCFDIVTPEQRRSSCFTHSYGKFIRGTGSILYTGPVAANDCE 400
Query: 320 ------------VQPKNKGKASSLK-----EQHLRYFTPREVANLHSFPGD--------- 353
PK++ S E+ +RY + E+A L FP D
Sbjct: 401 GDALPRAELFELADPKDRAYDESWSKRINWEEDMRYLSGTEIARLFGFPVDCASDGPTAM 460
Query: 354 --FQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
F+FP +++Q++ LLGNS+++ +VA + Y+
Sbjct: 461 RSFEFPSTCTMKQQWKLLGNSINV-IVASTVAYV 493
>gi|444706037|gb|ELW47400.1| tRNA (cytosine(38)-C(5))-methyltransferase [Tupaia chinensis]
Length = 208
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 79/133 (59%), Gaps = 13/133 (9%)
Query: 266 VDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQP--- 322
++ + ++ + +P L+ R+ +DIV P +R CFTK Y Y++GTGS+L T +
Sbjct: 74 LEENIDMNPYFLPPKLLLRYALLLDIVKPTCRRSTCFTKGYGSYIEGTGSVLQTAEDVQI 133
Query: 323 ----------KNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNS 372
+ K + L LRYFTP+E+ANL FP +F FP ++++QRY LLGNS
Sbjct: 134 EDIYKSLTNLSQEEKITQLLMLKLRYFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNS 193
Query: 373 LSIAVVAPLLQYL 385
L++ VVA L++ L
Sbjct: 194 LNVHVVAKLIKIL 206
>gi|126649199|ref|XP_001388272.1| DNA methyltransferase PMT1 - like protein [Cryptosporidium parvum
Iowa II]
gi|126117194|gb|EAZ51294.1| DNA methyltransferase PMT1 - like protein [Cryptosporidium parvum
Iowa II]
Length = 303
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 134/298 (44%), Gaps = 38/298 (12%)
Query: 119 KPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
K P FVENV FETS+TH +MI++L+ ++ T EF+LSP GVP +R RY+C++ RK
Sbjct: 9 KLPKAWFVENVANFETSNTHKEMIKMLSKLNFCTFEFMLSPTLIGVPNTRVRYYCVSVRK 68
Query: 179 PLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSN--- 235
+ + LN + + V+ H S +K E P + LE+SN
Sbjct: 69 DSANLIKQLNELKISIYQKNCQSIASNVLLSH-----SIEKNTEDFKPEKIPLEYSNLLC 123
Query: 236 -SGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGS-AMDIVY 293
+ N + ++ D ++ + + F ++I+ S DIV
Sbjct: 124 SLPYEYNQIIQMIDNIPNSISDVVMKSNDIDYESFNLLKQF--AKNIIKNNPSFKFDIVN 181
Query: 294 PDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKE-------------------- 333
+SK FTKSY KG G L ++ S+ +
Sbjct: 182 INSKASTTFTKSYIE-TKGRGGPLFDFSENHEKIEKSIIDYYDTYSHIFNTRILEHQRFQ 240
Query: 334 -----QHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
+LR F P+E+ + FP ++ ++ L+++Y+L+GNS+SI +V LL ++
Sbjct: 241 TARDNDNLRCFHPKEMLLIMGFPNNWFEGVNIDLKKQYSLIGNSISIHIVTILLHFML 298
>gi|443477276|ref|ZP_21067135.1| DNA-cytosine methyltransferase [Pseudanabaena biceps PCC 7429]
gi|443017642|gb|ELS32040.1| DNA-cytosine methyltransferase [Pseudanabaena biceps PCC 7429]
Length = 328
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 104/211 (49%), Gaps = 14/211 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
+R ++ +SGIGG+R KA + V + +I+ A YE NFG P+ G+I +
Sbjct: 24 YRAIDLFSGIGGIRLGFEKAFKERVEFVFSSEIDKYARITYESNFGDCPH-GDITKIPPH 82
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
E+ + L PCQP++ GL+K D R F I ++I P ++F+ENV G
Sbjct: 83 EIPAF--DILLAGFPCQPFSHAGLKKGFDDTRGTLFFDIAKII--EFHRPEVVFLENVKG 138
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA-KRKPLSFRCQLL 187
F+ D T A + L N Y +L+ FGVP +R R + +A + ++F +
Sbjct: 139 FKNHDKGNTFAVVKRTLNNLGYKVFAEVLNAKNFGVPQNRERIYIIAFQNHDINFEFPIG 198
Query: 188 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWD 218
NNQ +R + L N D +K+ D W+
Sbjct: 199 NNQGIRLGNILEANVD----SKYTISDKLWE 225
>gi|401405250|ref|XP_003882075.1| putative DNA methyltransferase [Neospora caninum Liverpool]
gi|325116489|emb|CBZ52043.1| putative DNA methyltransferase [Neospora caninum Liverpool]
Length = 1250
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 85/168 (50%), Gaps = 28/168 (16%)
Query: 37 QVVEAFDINDKANDVYELNF-----------GHRPYQ------------GNIQNLTAAEL 73
+VV D+N A DVY N +P Q +I + A+
Sbjct: 366 EVVGVIDVNPTAMDVYRRNLLPPSAESPSASRRQPSQTLQSPGVPLTSTKSIDSYPASFY 425
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILEL---IPHTVKPPHMLFVENVV 130
+ A WL+SPPCQP+TR GLQK ++D R SFL +L++ +PH +P ++L +ENVV
Sbjct: 426 GAFEADLWLVSPPCQPFTRIGLQKGNADRRNASFLYLLDVLCQLPHAQRPKYLL-LENVV 484
Query: 131 GFETSDTHAKMIEILAN-SDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
FE SDT ++ L Y F L+PL FG+P R R F AK+
Sbjct: 485 RFEVSDTFDCLLHALECVCGYQVDVFHLNPLHFGIPNCRSRCFVTAKK 532
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 333 EQHLRYFTPREVANLHSFPGDFQFPHHLSLR---QRYALLGNSLSIAVVAPLLQYLF 386
E +R+F+P+E+ LH FP F FP R + ++GNSL++ +V L+ +L
Sbjct: 1188 ETAVRFFSPQEILALHGFPPSFAFPDADEPRAWPSQRRMVGNSLNVHLVGMLIDFLV 1244
>gi|254445875|ref|ZP_05059351.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae
bacterium DG1235]
gi|198260183|gb|EDY84491.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae
bacterium DG1235]
Length = 321
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 93/174 (53%), Gaps = 12/174 (6%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
A+R ++ ++GIGG R L + + + V + +I+ A YE NFGH+P G+I + A+
Sbjct: 6 AFRFIDLFAGIGGFRIGLER--LGGECVFSSEIDRHAAATYERNFGHKP-AGDITKIDAS 62
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
E+ H + PCQP++ G Q DAR F +++ L+ + K P ++F+ENV
Sbjct: 63 EVP---DHEVICGGFPCQPFSVSGKQLGFEDARGTLFFEVMRLV--SAKRPKVVFLENVA 117
Query: 131 GF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ + T + + +L + Y T+ +L+ +GVP +R R + + RK L
Sbjct: 118 NYVRHQGGKTLKRTVGMLEEAGYATKWAVLNASDYGVPQARKRLYIVGIRKDLG 171
>gi|294949213|ref|XP_002786099.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239900227|gb|EER17895.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 125
Score = 87.8 bits (216), Expect = 8e-15, Method: Composition-based stats.
Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Query: 14 RVLEFYSGIGGMRYSLMKAD-VSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+VLE +SGIGGMR +L A + + + A D+N ++N VY ++G P NI + + +
Sbjct: 7 KVLELFSGIGGMRCALASAGLIMSSKITAVDVNTESNKVYARSYGDSPIAKNIASAGSVK 66
Query: 73 -LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILEL 113
D A W LSPPCQPYTRQG Q+ S D RA + +I ++
Sbjct: 67 WFDSMAADMWTLSPPCQPYTRQGKQQDSEDCRATALGRITQV 108
>gi|237835125|ref|XP_002366860.1| DNA methyltransferase, putative [Toxoplasma gondii ME49]
gi|211964524|gb|EEA99719.1| DNA methyltransferase, putative [Toxoplasma gondii ME49]
Length = 1172
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 69/109 (63%), Gaps = 8/109 (7%)
Query: 76 YGA-HA--WLLSPPCQPYTRQGLQKQSSDARAFSFLKILEL---IPHTVKPPHMLFVENV 129
YGA HA WL+SPPCQP+TR GLQK ++D R SFL +L++ +PH +P ++L +ENV
Sbjct: 441 YGAFHADIWLVSPPCQPFTRIGLQKGNADRRNVSFLYLLDVLCQLPHAQRPKYIL-LENV 499
Query: 130 VGFETSDTHAKMIEILAN-SDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
V FE SDT ++ L Y F L+PL FG+P R R F AK+
Sbjct: 500 VRFEVSDTFDCLVHALECVCGYEVNVFHLNPLHFGIPNCRSRCFVTAKK 548
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 315 SLLATVQPKNKGKASSL-----KEQHLRYFTPREVANLHSFPGDFQFPHHLSLR----QR 365
S+ + + PK + K L E +R+F+P E+ LH FP F FP R QR
Sbjct: 1087 SVSSFLPPKKRNKGWELHDILPPETLVRFFSPNEMLALHGFPPSFSFPEADEPRAWPAQR 1146
Query: 366 YALLGNSLSIAVVAPLLQYL 385
++GNSL++ +V L+ +L
Sbjct: 1147 R-MVGNSLNVHLVGMLIDFL 1165
>gi|119484300|ref|ZP_01618917.1| modification methylase NlaIV [Lyngbya sp. PCC 8106]
gi|119457774|gb|EAW38897.1| modification methylase NlaIV [Lyngbya sp. PCC 8106]
Length = 449
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 175/440 (39%), Gaps = 91/440 (20%)
Query: 14 RVLEFYSGIGGMRYSLMKADVS----AQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
+ ++ ++GIGG+R + S + + A +I+ +A+ VY NF H P +G+I+ +
Sbjct: 3 KFIDLFAGIGGLRLGFERGIASLGLRGECLLASEIDAEASQVYSQNFLHVP-EGDIRQIK 61
Query: 70 AAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
+ H LL+ PCQ ++ G ++ + R F +I+ LI P +L +EN
Sbjct: 62 SLP-----KHDVLLAGFPCQSFSYAGKKQGFGEIRGTLFFEIMRLI--DTNQPKVLILEN 114
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFC----------- 173
V G T D H K + + Y +FIL+ + FG+P +R R +
Sbjct: 115 VRGLTTHD-HGKTFATIKHEIQLRGYSFYQFILNSVNFGLPQNRVRVYMIGVLNASPQFN 173
Query: 174 ----LAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVER 229
L + S+ LN L+ P + + + PD S+D C P
Sbjct: 174 LISDLGPKDSHSYNAVQLNLFSLQHFPPKVKD------ILEENPDSSFD-----CSP--- 219
Query: 230 FLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE----ETVEVDRCVSIDHFLVPLSLIER- 284
EFS + ++V G +D G E +C + L+ L + ER
Sbjct: 220 --EFSQALNKVVQGDLNKLHGVRLIDYRGGNSIHSWELGLRGKCSEDEIKLMNLLITERR 277
Query: 285 ---WGSAMD------------IVYPD---------SKRCCCFTKSYYRYVKGTGS----- 315
+G D +P SKR Y+ V G S
Sbjct: 278 KKKFGKHQDGKQLTREQIASFFEHPKLTHLLESLVSKRYLKVINGQYKPVSGNFSFEVYK 337
Query: 316 ------LLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALL 369
+ T+ + + + +R TPRE A L FP DFQ H +L + + L
Sbjct: 338 FLDPEKVSVTLVASDANRIGVYHQNRVRRITPREAARLQGFPDDFQL--HPNLTKAFYQL 395
Query: 370 GNSLSIAVVAPLLQYLFAQA 389
GNS+SI V+ + Q + AQ
Sbjct: 396 GNSVSINVITAITQDVIAQV 415
>gi|189096062|pdb|2UYH|A Chain A, Hhai Dna Methyltransferase S87q-Q237s Mutant Complex With
13mer Gcgc-Gmgc Oligonucleotide And Sah
Length = 327
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 151/384 (39%), Gaps = 80/384 (20%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
R ++ ++G+GG R +L A+ V + + + A +VYE+NFG +P +G+I +
Sbjct: 11 GLRFIDLFAGLGGFRLAL--ESCGAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNEK 67
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ H L + PCQ ++ QG QK D+R F I ++ K P ++F+ENV
Sbjct: 68 TIP---DHDILCAGFPCQAFSIQGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMENVK 122
Query: 131 GFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
F + D + +E++ N+ DY +L+ L +G+P R R + + R
Sbjct: 123 NFASHD-NGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRND------- 174
Query: 187 LNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 246
LN Q + P P N T + PD + L+ ++R D V T
Sbjct: 175 LNIQNFQFPKPFELN---TFVKDLLLPDSEVEHLV-----IDR-------KDLVMTNQEI 219
Query: 247 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 306
T V L ++ + GS I S R T S
Sbjct: 220 EQTTPKTVR-----------------------LGIVGKGGSGERIY---STRGIAITLSA 253
Query: 307 YRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRY 366
Y G G T L R PRE A + +P ++ H S Q Y
Sbjct: 254 Y----GGGIFAKT--------GGYLVNGKTRKLHPRECARVMGYPDSYKV--HPSTSQAY 299
Query: 367 ALLGNSLSIAVVAPLLQYLFAQAG 390
GNS+ I V LQY+ G
Sbjct: 300 KQFGNSVVINV----LQYIAYNIG 319
>gi|153870185|ref|ZP_01999636.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
gi|152073352|gb|EDN70367.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
Length = 235
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 99/220 (45%), Gaps = 22/220 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+ ++ ++GIGG+R + + V + + + A D YE NFG RP +G+I + A
Sbjct: 4 FEFIDLFAGIGGIRLGF--ESIGGKCVFSSEWDKYAQDTYEANFGERP-EGDITKINAKT 60
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H LL PCQ ++ G QK SD R F I E++ +K P+ +ENV
Sbjct: 61 IP---EHNILLGGFPCQAFSICGNQKGFSDTRGTLFFNIEEIL--RIKKPYAFMLENVKN 115
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 188
+ D T ++E L N Y IL+ L FG+P R R + ++ ++F
Sbjct: 116 LRSHDKGRTFKILLEHLENLGYSVHHTILNSLDFGIPQKRERTIIVGFQENIAFSF---- 171
Query: 189 NQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVE 228
P PL D+T I + D + LL S E
Sbjct: 172 ------PKPLGIKPDLTKILEKDSEVEKNILLLMSLKKRE 205
>gi|440753140|ref|ZP_20932343.1| modification methylase HhaI [Microcystis aeruginosa TAIHU98]
gi|440177633|gb|ELP56906.1| modification methylase HhaI [Microcystis aeruginosa TAIHU98]
Length = 331
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 9 DGEAWRVLEFYSGIGGMRYSL----MKADVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
D + R ++ + G+GG R ++ + ++ + V + DI+ A +Y+ NFG +P QG+
Sbjct: 6 DSKKIRFIDLFCGLGGFRVAIEQVCRQKNLESDCVFSCDIDKDAQSIYQANFGDKP-QGD 64
Query: 65 IQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
I + A LD+ + PCQP++ G K D R F +I ++ K P
Sbjct: 65 ITEIAA--LDIPNHDILMAGFPCQPFSICGNLKGFEDTRGTLFFEIARILK--AKQPAAF 120
Query: 125 FVENVV---GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ENV G + T +++ L + DY T +L+ L FG+P R R F + R+
Sbjct: 121 ILENVKQLQGHQQGKTLQVILDTLQDLDYYTDYRVLNALNFGLPQKRERIFIVGFRETRG 180
Query: 182 FRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPD 214
F P P L +T I + + D
Sbjct: 181 FIW----------PKPALSRTSLTEILEENVSD 203
>gi|443654424|ref|ZP_21131346.1| cytosine-specific methyltransferase [Microcystis aeruginosa
DIANCHI905]
gi|159026805|emb|CAO86650.1| ngoBIM [Microcystis aeruginosa PCC 7806]
gi|443333816|gb|ELS48356.1| cytosine-specific methyltransferase [Microcystis aeruginosa
DIANCHI905]
Length = 331
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
D + R ++ +SG+GG R ++ + ++ + V + DI+ A +Y NFG +P +G+
Sbjct: 6 DSKKIRFIDLFSGLGGFRLAIEQVCRPKNLESDCVFSCDIDKDAQAIYHANFGDQP-RGD 64
Query: 65 IQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
I + A LD+ + PCQP++ G K D R F +I ++ K P
Sbjct: 65 ITEIAA--LDIPNHDILMAGFPCQPFSICGDLKGFEDTRGTLFFEIARIL--KAKQPAAF 120
Query: 125 FVENVV---GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ENV G + T +++ L + DY T +L+ L FG+P R R F + R+
Sbjct: 121 ILENVKQLQGHQQGKTLEVILDTLQDLDYYTDYRVLNALNFGLPQKRERIFIVGFREARG 180
Query: 182 FRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPD 214
F P P L +T I + + D
Sbjct: 181 FIW----------PKPALSRTSLTEILEENVSD 203
>gi|425443062|ref|ZP_18823294.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9717]
gi|389715722|emb|CCH99951.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9717]
Length = 331
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
D + R ++ + G+GG R ++ + ++ + V + DI+ A +Y NFG +P QG+
Sbjct: 6 DKQKIRFVDLFCGLGGFRVAIEQVCRQQNLESDCVFSCDIDKDARAIYHANFGDKP-QGD 64
Query: 65 IQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
I + A LD+ + PCQP++ G K D R F +I ++ K P
Sbjct: 65 ITEIAA--LDIPNHDILMAGFPCQPFSICGDLKGFEDTRGTLFFEIARILK--AKQPAAF 120
Query: 125 FVENVV---GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ENV G + T +++ L + DY T +L+ L FG+P R R F + R+
Sbjct: 121 ILENVKQLQGHQQGKTLEVILDTLQDLDYYTDYRVLNALNFGLPQKRERIFIVGFREARG 180
Query: 182 FRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPD 214
F P P L +T I + + D
Sbjct: 181 FIW----------PKPALSRTTLTEILEENVSD 203
>gi|428776054|ref|YP_007167841.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
gi|428690333|gb|AFZ43627.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
Length = 333
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVS-AQVVEAFDINDKANDVYELNFGHR 59
++K++ +R ++ ++GIGG+R +A + + V + +I+ A Y+ NF
Sbjct: 9 IQKELFDFTNRKYRAIDLFAGIGGIRLGFQQAFANNIEFVFSSEIDRFARMTYQANFSEE 68
Query: 60 PYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
P QG++ T + LD+ L PCQP++ GL+K DAR F I ++I
Sbjct: 69 P-QGDL--TTISPLDIPPFDILLAGFPCQPFSNAGLKKGFEDARGTLFFDIAKII--EAH 123
Query: 120 PPHMLFVENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
P ++F+ENV F T D T + EI+ Y + + FGVP +R R + +A
Sbjct: 124 QPEIIFLENVKNFRTHDQGNTFKVVKEIMEKLGYQVYAQVFNAKHFGVPQNRERIYIVA 182
>gi|390955024|ref|YP_006418782.1| DNA-methyltransferase Dcm [Aequorivita sublithincola DSM 14238]
gi|390421010|gb|AFL81767.1| DNA-methyltransferase Dcm [Aequorivita sublithincola DSM 14238]
Length = 326
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 12/179 (6%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ 66
E + ++ + GIGG R + +A D+ V + DI+ A + YE NFG +P+ G+I
Sbjct: 4 EKLKFIDLFCGIGGFRVAFEEACEENDIQPDCVFSSDIDKYAQESYEANFGEKPF-GDIT 62
Query: 67 NLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
+ E D+ PCQP++ G K +D R F I +I K P +
Sbjct: 63 KIN--EKDIPDHDILFGGFPCQPFSIIGQMKGLNDTRGTLFFDIARII--EAKRPKAFIL 118
Query: 127 ENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
ENV VG + T +++ L + Y Q +L+ L +G+P R R + R+P+ F
Sbjct: 119 ENVKQLVGHDQGKTLKVIVQSLKDLGYHVQYSVLNALDYGLPQKRERVVIVGHREPIMF 177
>gi|166367724|ref|YP_001659997.1| modification methylase NgoBI [Microcystis aeruginosa NIES-843]
gi|425464491|ref|ZP_18843804.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9809]
gi|166090097|dbj|BAG04805.1| modification methylase NgoBI [Microcystis aeruginosa NIES-843]
gi|389833509|emb|CCI21930.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9809]
Length = 330
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 9 DGEAWRVLEFYSGIGGMRYSL----MKADVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
D + R ++ + G+GG R ++ + ++ + V + DI+ A +Y NFG +P QG+
Sbjct: 6 DKQKIRFVDLFCGLGGFRVAIEQVCRQKNLESDCVFSCDIDKDARSIYHANFGDQP-QGD 64
Query: 65 IQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
I + A LD+ + PCQP++ G K D R F +I ++ K P
Sbjct: 65 ITEIAA--LDIPNHDILMAGFPCQPFSICGDLKGFEDTRGTLFFEIARILK--AKQPAAF 120
Query: 125 FVENVV---GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ENV G + T +++ L + DY T +L+ L FG+P R R F + R+
Sbjct: 121 ILENVKQLQGHQQGKTLEVILDTLQDLDYYTDYRVLNALNFGLPQKRERIFIVGFREARG 180
Query: 182 FRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPD 214
F P P L +T I + + D
Sbjct: 181 FIW----------PKPALSRTTLTEILEENVSD 203
>gi|60098349|emb|CAH65005.1| hypothetical protein RCJMB04_1a16 [Gallus gallus]
Length = 102
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLTA 70
A RVLE YSGIGGM +L ++ + A+VV A D+N AN+VY+ NF P + I+ +T
Sbjct: 3 ALRVLELYSGIGGMHQALKESCICAEVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGITL 62
Query: 71 AELDMYGAHAWLLSPPCQPYTR 92
E D L+SPPCQP+TR
Sbjct: 63 KEFDRLSFDMILMSPPCQPFTR 84
>gi|387773675|ref|ZP_10128965.1| modification methylase HhaI [Haemophilus parahaemolyticus HK385]
gi|127455|sp|P05102.1|MTH1_HAEPH RecName: Full=Modification methylase HhaI; Short=M.HhaI; AltName:
Full=Cytosine-specific methyltransferase HhaI
gi|1065144|pdb|1MHT|A Chain A, Covalent Ternary Structure Of Hhai Methyltransferase, Dna
And S-Adenosyl-L-Homocysteine
gi|1942412|pdb|3MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With
Unmodified Dna And Adohcy
gi|1942415|pdb|4MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Native
Dna And Adohcy
gi|2392799|pdb|5MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With
Hemimethylated Dna And Adohcy
gi|3660437|pdb|6MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Adohcy
And Dna Containing 4'-Thio-2'deoxycytidine At The Target
gi|4139672|pdb|7MHT|A Chain A, Cytosine-Specific Methyltransferase HhaiDNA COMPLEX
gi|4139675|pdb|8MHT|A Chain A, Cytosine-Specific Methyltransferase HhaiDNA COMPLEX
gi|4139680|pdb|9MHT|A Chain A, Cytosine-specific Methyltransferase Hhai/dna Complex
gi|4558252|pdb|10MH|A Chain A, Ternary Structure Of Hhai Methyltransferase With Adohcy
And Hemimethylated Dna Containing
5,6-Dihydro-5-Azacytosine At The Target
gi|4699814|pdb|2HMY|B Chain B, Binary Complex Of Hhai Methyltransferase With Adomet
Formed In The Presence Of A Short Nonpsecific Dna
Oligonucleotide
gi|24158912|pdb|1M0E|A Chain A, Zebularine: A Novel Dna Methylation Inhibitor That Forms A
Covalent Complex With Dna Methyltransferase
gi|52695513|pdb|1SKM|A Chain A, Hhai Methyltransferase In Complex With Dna Containing An
Abasic South Carbocyclic Sugar At Its Target Site
gi|85544385|pdb|2C7O|A Chain A, Hhai Dna Methyltransferase Complex With 13mer
Oligonucleotide Containing 2-Aminopurine Adjacent To The
Target Base (Pcgc:gmgc) And Sah
gi|85544388|pdb|2C7P|A Chain A, Hhai Dna Methyltransferase Complex With Oligonucleotide
Containing 2-Aminopurine Opposite To The Target Base (
Gcgc:gmpc) And Sah
gi|85544391|pdb|2C7Q|A Chain A, Hhai Dna Methyltransferase Complex With Oligonucleotide
Containing 2-Aminopurine Outside The Recognition
Sequence (Paired With G) And Sah
gi|116667789|pdb|2HR1|A Chain A, Ternary Structure Of Wt M.hhai C5-cytosine Dna
Methyltransferase With Unmodified Dna And Adohcy
gi|157831356|pdb|1HMY|A Chain A, Crystal Structure Of The Hhai Dna Methyltransferase
Complexed With S- Adenosyl-L-Methionine
gi|290560089|pdb|3EEO|A Chain A, M. Hhai Co-Crystallized With Synthetic Dsdna Containing A
Propane Diol In Place Of The Deoxycytidine Residue
Targeted For Methylation.
gi|148949|gb|AAA24989.1| DNA methylase [Haemophilus haemolyticus]
gi|386904416|gb|EIJ69210.1| modification methylase HhaI [Haemophilus parahaemolyticus HK385]
Length = 327
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 149/384 (38%), Gaps = 80/384 (20%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
R ++ ++G+GG R +L A+ V + + + A +VYE+NFG +P +G+I +
Sbjct: 11 GLRFIDLFAGLGGFRLAL--ESCGAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNEK 67
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ H L + PCQ ++ G QK D+R F I ++ K P ++F+ENV
Sbjct: 68 TIP---DHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMENVK 122
Query: 131 GFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
F + D + +E++ N+ DY +L+ L +G+P R R + + R
Sbjct: 123 NFASHD-NGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRND------- 174
Query: 187 LNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 246
LN Q + P P N T + PD + L+ ++R D V T
Sbjct: 175 LNIQNFQFPKPFELN---TFVKDLLLPDSEVEHLV-----IDR-------KDLVMTNQEI 219
Query: 247 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 306
T V L ++ + G I S R T S
Sbjct: 220 EQTTPKTVR-----------------------LGIVGKGGQGERIY---STRGIAITLSA 253
Query: 307 YRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRY 366
Y G G T L R PRE A + +P ++ H S Q Y
Sbjct: 254 Y----GGGIFAKT--------GGYLVNGKTRKLHPRECARVMGYPDSYKV--HPSTSQAY 299
Query: 367 ALLGNSLSIAVVAPLLQYLFAQAG 390
GNS+ I V LQY+ G
Sbjct: 300 KQFGNSVVINV----LQYIAYNIG 319
>gi|309803758|ref|ZP_07697844.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
11V1-d]
gi|308164167|gb|EFO66428.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
11V1-d]
Length = 336
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 150/381 (39%), Gaps = 77/381 (20%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ ++GIGG R +L AQ V + + + A + Y +NFG P +G+I +
Sbjct: 10 KGYKFIDLFAGIGGFRLAL--ESFGAQCVYSNEWDKFAQETYHMNFGDTP-EGDITQVDE 66
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ H L + PCQP++ G Q D+R F + ++ K P ++F+ENV
Sbjct: 67 TSIP---DHDILCAGFPCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENV 121
Query: 130 VGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
F T D K I ++ N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 122 KNFATHDG-GKTISVVKNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDIE---- 176
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSW-DKLLESCDPVERFLEFSNSGDQVNTET 244
+L P P N + PD+ D ++ D V D+VN
Sbjct: 177 ---RELFVFPQPFKLN---RFVEDFLLPDNEVRDLIVNRTDLV--------LNDKVNINY 222
Query: 245 GFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTK 304
ST G E + + ++I + +G + F K
Sbjct: 223 NSPSTIRVGTVGKGGQGERIYSPKGIAI--------TLSAYGGGV------------FAK 262
Query: 305 SYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQ 364
TG L Q R PRE A + FP F+ H ++ Q
Sbjct: 263 --------TGGYLINGQT--------------RRLHPRECARIMGFPDSFKL--HPNMNQ 298
Query: 365 RYALLGNSLSIAVVAPLLQYL 385
Y LGNS+ + V+ + Q +
Sbjct: 299 AYKQLGNSVVVDVLQLITQQI 319
>gi|365875704|ref|ZP_09415230.1| DNA-cytosine methyltransferase [Elizabethkingia anophelis Ag1]
gi|442587430|ref|ZP_21006247.1| DNA-cytosine methyltransferase [Elizabethkingia anophelis R26]
gi|365756549|gb|EHM98462.1| DNA-cytosine methyltransferase [Elizabethkingia anophelis Ag1]
gi|442562871|gb|ELR80089.1| DNA-cytosine methyltransferase [Elizabethkingia anophelis R26]
Length = 436
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 10/172 (5%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++ ++GIGG R L ++ V + + ++ A YE NFG P+ G+I +
Sbjct: 106 IDLFAGIGGFR--LAAQNLGGNCVFSSEWDEFAQKTYESNFGESPF-GDITKSETKKFIP 162
Query: 76 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 135
PCQP++ GL++ + R F ILE++ +T P M +ENV G ++
Sbjct: 163 KNYELLCAGFPCQPFSYAGLKQGFDETRGTLFFDILEILKNTT--PKMFLLENVKGLKSH 220
Query: 136 DTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
D K ++++ NS Y + IL+ FG+P R R++C+ R ++F
Sbjct: 221 DG-GKTLKVIENSLTELGYTIKWEILNSYDFGLPQYRERWYCVGFRDKVNFE 271
>gi|54297036|ref|YP_123405.1| hypothetical protein lpp1078 [Legionella pneumophila str. Paris]
gi|53750821|emb|CAH12229.1| hypothetical protein lpp1078 [Legionella pneumophila str. Paris]
Length = 320
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 12/169 (7%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+A++ ++ ++GIGG+R K ++ + V + +I+ YE NFG +P+ G+I ++
Sbjct: 4 KAFKFIDLFAGIGGIRIPFDK--LNGECVFSSEIDPYCQKTYEANFGEKPF-GDITKISP 60
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
++ H LL PCQ ++ G QK SD R F I +++ VK P +ENV
Sbjct: 61 QDVP---DHDILLGGFPCQAFSIIGRQKGFSDTRGTLFFNIEQIL--KVKRPRAFLLENV 115
Query: 130 VGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
T D T +IE L N Y IL+ L FGVP R R + +
Sbjct: 116 KQLSTHDGGRTFQIIIETLRNLGYTVYSTILNSLDFGVPQKRERTYIVG 164
>gi|390438968|ref|ZP_10227394.1| Modification methylase NgoBI [Microcystis sp. T1-4]
gi|389837617|emb|CCI31518.1| Modification methylase NgoBI [Microcystis sp. T1-4]
Length = 340
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 16 LEFYSGIGGMRYSL----MKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
++ + G+GG R ++ + ++ + V + DI+ A +Y+ NFG +P QG+I + A
Sbjct: 13 IDLFCGLGGFRVAIEQVCRQKNLESDCVFSCDIDKDARAIYQANFGDQP-QGDITEIAA- 70
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV- 130
LD+ + PCQP++ G K D R F +I ++ VK P +ENV
Sbjct: 71 -LDIPNHDILMAGFPCQPFSICGDLKGFEDTRGTLFFEIARILK--VKQPAAFILENVKQ 127
Query: 131 --GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 188
G + T +++ L + DY T +L+ L FG+P R R F + R+ F
Sbjct: 128 LQGHQQGKTLQVILDTLQDLDYYTDYRVLNALNFGLPQKRERIFIVGFRESRRFIW---- 183
Query: 189 NQLLRSPSPLLGNDDMTVITKHDQPD 214
P P L +T I + + D
Sbjct: 184 ------PKPALSRTSLTEILEENVSD 203
>gi|378776967|ref|YP_005185404.1| hypothetical protein lp12_1037 [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|364507781|gb|AEW51305.1| hypothetical protein lp12_1037 [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 341
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 12/169 (7%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+A++ ++ ++GIGG+R K ++ + V + +I+ YE NFG +P+ G+I ++
Sbjct: 25 KAFKFIDLFAGIGGIRIPFDK--LNGECVFSSEIDPYCQKTYEANFGEKPF-GDITKISP 81
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
++ H LL PCQ ++ G QK SD R F I +++ VK P +ENV
Sbjct: 82 QDVP---DHDILLGGFPCQAFSIIGRQKGFSDTRGTLFFNIEQIL--KVKRPRAFLLENV 136
Query: 130 VGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
T D T +IE L N Y IL+ L FGVP R R + +
Sbjct: 137 KQLSTHDGGRTFQIIIETLRNLGYTVYSTILNSLDFGVPQKRERTYIVG 185
>gi|425468721|ref|ZP_18847714.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9701]
gi|389884620|emb|CCI35097.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9701]
Length = 331
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
D + R ++ + G+GG R ++ + ++ + V + DI+ A +Y NFG +P +G+
Sbjct: 6 DSKKIRFVDLFCGLGGFRVAIAQVCRQKNLESDCVFSCDIDKDARSIYHANFGDQP-RGD 64
Query: 65 IQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
I + A LD+ + PCQP++ G K D R F +I ++ K P
Sbjct: 65 ITEIAA--LDIPNHDILMAGFPCQPFSICGDLKGFEDTRGTLFFEIARIL--KAKQPAAF 120
Query: 125 FVENVV---GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ENV G + T +++ L + DY T +L+ L FG+P R R F + R+
Sbjct: 121 ILENVKQLQGHQQGKTLQVILDTLQDLDYYTDYRVLNALHFGLPQKRERIFIVGFREARR 180
Query: 182 FRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPD 214
F P P L +T I + + D
Sbjct: 181 FIW----------PKPALSRTSLTEILEENVSD 203
>gi|425460097|ref|ZP_18839579.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9808]
gi|389827241|emb|CCI21624.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9808]
Length = 331
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 9 DGEAWRVLEFYSGIGGMRYSL----MKADVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
D + R ++ +SG+GG R ++ + ++ + V + DI+ A +Y NF +P QG+
Sbjct: 6 DSKKIRFIDLFSGLGGFRVAIEQVCRQKNLESDCVFSCDIDKDARSIYHANFCDQP-QGD 64
Query: 65 IQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
I + A LD+ + PCQP++ G K D R F +I ++ K P
Sbjct: 65 ITEIAA--LDIPNHDILMAGFPCQPFSICGDLKGFEDTRGTLFFEIARILK--AKQPAAF 120
Query: 125 FVENVV---GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ENV G + T +++ L + DY T +L+ L FG+P R R F + R+
Sbjct: 121 ILENVKQLQGHQQGKTLQVILDTLQDLDYYTDYRVLNALNFGLPQKRERIFIVGFREARR 180
Query: 182 FRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPD 214
F P P L +T I + + D
Sbjct: 181 FIW----------PKPALSRTSLTEILEENVSD 203
>gi|50513617|pdb|1SVU|A Chain A, Structure Of The Q237w Mutant Of Hhai Dna
Methyltransferase: An Insight Into Protein-Protein
Interactions
gi|50513618|pdb|1SVU|B Chain B, Structure Of The Q237w Mutant Of Hhai Dna
Methyltransferase: An Insight Into Protein-Protein
Interactions
Length = 327
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 149/382 (39%), Gaps = 80/382 (20%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
R ++ ++G+GG R +L A+ V + + + A +VYE+NFG +P +G+I + +
Sbjct: 13 RFIDLFAGLGGFRLAL--ESCGAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNEKTI 69
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
H L + PCQ ++ G QK D+R F I ++ K P ++F+ENV F
Sbjct: 70 P---DHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMENVKNF 124
Query: 133 ETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 188
+ D + +E++ N+ DY +L+ L +G+P R R + + R LN
Sbjct: 125 ASHD-NGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRND-------LN 176
Query: 189 NQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLS 248
Q + P P N T + PD + L+ ++R D V T
Sbjct: 177 IQNFQFPKPFELN---TFVKDLLLPDSEVEHLV-----IDR-------KDLVMTNQEIEQ 221
Query: 249 TGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYR 308
T V L ++ + G I S R T S Y
Sbjct: 222 TTPKTVR-----------------------LGIVGKGGWGERIY---STRGIAITLSAY- 254
Query: 309 YVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYAL 368
G G T L R PRE A + +P ++ H S Q Y
Sbjct: 255 ---GGGIFAKT--------GGYLVNGKTRKLHPRECARVMGYPDSYKV--HPSTSQAYKQ 301
Query: 369 LGNSLSIAVVAPLLQYLFAQAG 390
GNS+ I V LQY+ G
Sbjct: 302 FGNSVVINV----LQYIAYNIG 319
>gi|12084381|pdb|1FJX|A Chain A, Structure Of Ternary Complex Of Hhai Methyltransferase
Mutant (T250g) In Complex With Dna And Adohcy
gi|85544394|pdb|2C7R|A Chain A, Hhai Dna Methyltransferase (T250g Mutant) Complex With
Oligonucleotide Containing 2-Aminopurine As A Target
Base (Gpgc:gmgc) And Sah
Length = 327
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 14/177 (7%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
R ++ ++G+GG R +L A+ V + + + A +VYE+NFG +P +G+I +
Sbjct: 11 GLRFIDLFAGLGGFRLAL--ESCGAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNEK 67
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ H L + PCQ ++ G QK D+R F I ++ K P ++F+ENV
Sbjct: 68 TIP---DHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMENVK 122
Query: 131 GFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
F + D + +E++ N+ DY +L+ L +G+P R R + + R L+ +
Sbjct: 123 NFASHD-NGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRNDLNIQ 178
>gi|425434415|ref|ZP_18814884.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9432]
gi|389676067|emb|CCH94831.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9432]
Length = 331
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
D + R ++ + G+GG R ++ + ++ + V + DI+ A +Y+ NF +P +G+
Sbjct: 6 DSKKIRFVDLFCGLGGFRVAIERVCRQKNLESDCVFSCDIDKDAQAIYQANFSDKP-RGD 64
Query: 65 IQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
I + A LD+ + PCQP++ G K D R F +I+ ++ K P
Sbjct: 65 ITEIAA--LDIPNHDILMAGFPCQPFSICGNLKGFEDTRGTLFFEIVRILK--AKQPAAF 120
Query: 125 FVENVV---GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ENV G + T +++ L + DY T +L+ L FG+P R R F + R+
Sbjct: 121 ILENVKQLQGHQQGKTLQVILDTLQDLDYYTDYRVLNALNFGLPQKRERIFIVGFRETRG 180
Query: 182 FRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPD 214
F P P L +T I + + D
Sbjct: 181 FIW----------PKPALSRTTLTEILEENVSD 203
>gi|161761159|pdb|2ZCJ|A Chain A, Ternary Structure Of The Glu119gln M.Hhai, C5-Cytosine Dna
Methyltransferase, With Unmodified Dna And Adohcy
Length = 327
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 149/384 (38%), Gaps = 80/384 (20%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
R ++ ++G+GG R +L A+ V + + + A +VYE+NFG +P +G+I +
Sbjct: 11 GLRFIDLFAGLGGFRLAL--ESCGAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNEK 67
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ H L + PCQ ++ G QK D+R F I ++ K P ++F++NV
Sbjct: 68 TIP---DHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMQNVK 122
Query: 131 GFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
F + D + +E++ N+ DY +L+ L +G+P R R + + R
Sbjct: 123 NFASHD-NGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRND------- 174
Query: 187 LNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 246
LN Q + P P N T + PD + L+ ++R D V T
Sbjct: 175 LNIQNFQFPKPFELN---TFVKDLLLPDSEVEHLV-----IDR-------KDLVMTNQEI 219
Query: 247 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 306
T V L ++ + G I S R T S
Sbjct: 220 EQTTPKTVR-----------------------LGIVGKGGQGERIY---STRGIAITLSA 253
Query: 307 YRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRY 366
Y G G T L R PRE A + +P ++ H S Q Y
Sbjct: 254 Y----GGGIFAKT--------GGYLVNGKTRKLHPRECARVMGYPDSYKV--HPSTSQAY 299
Query: 367 ALLGNSLSIAVVAPLLQYLFAQAG 390
GNS+ I V LQY+ G
Sbjct: 300 KQFGNSVVINV----LQYIAYNIG 319
>gi|418695778|ref|ZP_13256791.1| putative modification methylase HhaI [Leptospira kirschneri str.
H1]
gi|421109759|ref|ZP_15570270.1| putative modification methylase HhaI [Leptospira kirschneri str.
H2]
gi|409956522|gb|EKO15450.1| putative modification methylase HhaI [Leptospira kirschneri str.
H1]
gi|410005119|gb|EKO58919.1| putative modification methylase HhaI [Leptospira kirschneri str.
H2]
Length = 338
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 14/177 (7%)
Query: 14 RVLEFYSGIGGMRY----SLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
R ++ + GIGG R S KA + + V + DI++ A Y NFG P+ G+I +
Sbjct: 8 RFVDLFCGIGGFRVAAEKSFKKAKLDFKCVFSSDIDEYAQKAYFANFGEMPF-GDISKIP 66
Query: 70 AAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
+ E+ H L + PCQP++ G K D R F +I ++ K P +EN
Sbjct: 67 SNEIP---DHDLLFAGFPCQPFSIIGKGKGFEDTRGTLFFEIARIL--DAKRPKAFILEN 121
Query: 129 V---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
V V T K+IE L + Y + +L+ L +G+P R R F + KP+ F
Sbjct: 122 VKQLVSHNEGKTFKKIIETLNSLGYSIEYKVLNALHYGLPQKRERVFIVGFHKPMQF 178
>gi|172038109|ref|YP_001804610.1| putative modification methylase [Cyanothece sp. ATCC 51142]
gi|354556456|ref|ZP_08975751.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
gi|171699563|gb|ACB52544.1| putative modification methylase [Cyanothece sp. ATCC 51142]
gi|353551668|gb|EHC21069.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
Length = 344
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 19/188 (10%)
Query: 8 NDGEAWRVLEFYSGIGGMR---------YSLMKADVSAQVVEAFDINDKANDVYELNFGH 58
N + ++ + GIGG R Y L + + V + DI+ A YE NF
Sbjct: 11 NSNLQLKYIDLFCGIGGFRIALESVCSQYRLKDKKIESICVFSSDIDPDAKKNYEANFKE 70
Query: 59 RPYQGNIQNLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHT 117
+P QG+I T ++ H LL+ PCQP++ G + D R F +I ++ +
Sbjct: 71 KP-QGDI---TKIPIESIPKHDLLLAGFPCQPFSICGKLEGFEDTRGTLFFEIARILDY- 125
Query: 118 VKPPHMLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 174
P+ +ENV VG T +++IL++ Y T +L+ L FG+P R R F +
Sbjct: 126 -HKPYAFILENVKQLVGHNKGKTLKTILKILSDLGYYTDYKVLNALNFGLPQKRERVFIV 184
Query: 175 AKRKPLSF 182
R PL+F
Sbjct: 185 GFRDPLAF 192
>gi|416389979|ref|ZP_11685428.1| putative modification methylase [Crocosphaera watsonii WH 0003]
gi|357264134|gb|EHJ13060.1| putative modification methylase [Crocosphaera watsonii WH 0003]
Length = 338
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 14 RVLEFYSGIGGMR---------YSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
+ ++ + GIGG R Y ++ V + DI+ A YE NF +P QG+
Sbjct: 17 KYIDLFCGIGGFRIALELVCSHYKFKDQKINPICVFSSDIDADAQKNYEANFKDKP-QGD 75
Query: 65 IQNLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHM 123
I T +++ H LL+ PCQP++ G + D R F I ++ + P+
Sbjct: 76 I---TQIPVELIPNHNLLLAGFPCQPFSICGKLQGFEDTRGTLFFDIARILDY--HKPYA 130
Query: 124 LFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
+ENV VG T ++EIL++ Y T+ +L+ L FG+P R R F + R PL
Sbjct: 131 FILENVKQLVGHNKGKTLNTILEILSDLGYYTEYKVLNALDFGLPQKRERIFIIGLRDPL 190
Query: 181 SF 182
+F
Sbjct: 191 NF 192
>gi|309807025|ref|ZP_07701007.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
03V1-b]
gi|308166645|gb|EFO68842.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
03V1-b]
Length = 336
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 150/381 (39%), Gaps = 77/381 (20%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ ++GIGG R +L A+ V + + + A + Y++NFG P G+I +
Sbjct: 10 KGYKFIDLFAGIGGFRLAL--ESFGAKCVYSNEWDKFAQETYQMNFGDTP-GGDITQVDE 66
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ H L + PCQP++ G Q D+R F + ++ K P ++F+ENV
Sbjct: 67 TSIP---DHDILCAGFPCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENV 121
Query: 130 VGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
F T D K I ++ N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 122 KNFATHDG-GKTIRVVKNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDIE---- 176
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDS-WDKLLESCDPVERFLEFSNSGDQVNTET 244
+L P P N + PD+ D ++ D V D+VN
Sbjct: 177 ---RELFVFPQPFKLN---RFVEDFLLPDNEVRDLIVNRTDLV--------LNDKVNINY 222
Query: 245 GFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTK 304
ST G E + + ++I + +G + F K
Sbjct: 223 NSPSTIRVGTVGKGGQGERIYSPKGIAI--------TLSAYGGGV------------FAK 262
Query: 305 SYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQ 364
TG L Q R PRE A + FP F+ H ++ Q
Sbjct: 263 --------TGGYLINGQT--------------RRLHPRECARIMGFPDSFKL--HPNMNQ 298
Query: 365 RYALLGNSLSIAVVAPLLQYL 385
Y LGNS+ + V+ + Q +
Sbjct: 299 AYKQLGNSVVVDVLQLITQQI 319
>gi|425434431|ref|ZP_18814900.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9432]
gi|389676083|emb|CCH94847.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9432]
Length = 340
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 4 DMCKNDGEAWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHR 59
++ KN E R ++ + G+GG R ++ + ++++ V + DI+ A +Y NFG
Sbjct: 2 NLLKNK-ERIRFIDLFCGLGGFRVAIAQVCRQKNLASDCVFSCDIDKDAQAIYHANFGDE 60
Query: 60 PYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
P QG+I + A LD+ + PCQP++ G K D R F +I ++ K
Sbjct: 61 P-QGDITEIAA--LDIPNHDILMAGFPCQPFSICGNLKGFEDTRGTLFFEIARILK--AK 115
Query: 120 PPHMLFVENVV---GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
P +ENV G + T +++ L + Y T +L+ L FG+P R R F +
Sbjct: 116 QPASFILENVKQLQGHQQGKTLEVILDTLQDLGYYTDYRVLNALNFGLPQKRERIFIVGF 175
Query: 177 RKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPD 214
R+ F P P L +T I + + D
Sbjct: 176 REARGFIW----------PKPALSRTSLTEILEENVSD 203
>gi|425446969|ref|ZP_18826964.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9443]
gi|389732590|emb|CCI03507.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9443]
Length = 331
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
D + R ++ + G+GG R ++ + ++ + V + DI+ A +Y NFG +P QG+
Sbjct: 6 DKQKIRFIDLFCGLGGFRVAIEQVCRQQNLESDCVFSCDIDKDAQAIYHANFGDQP-QGD 64
Query: 65 IQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
I + A LD+ + PCQP++ G K D R F +I ++ K P
Sbjct: 65 ITEIAA--LDIPNHDILMAGFPCQPFSICGDLKGFDDTRGTLFFEIARIL--KAKQPAAF 120
Query: 125 FVENVV---GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ENV G + T ++ L + DY +L+ L FG+P R R F + R+
Sbjct: 121 ILENVKQLQGHQQGKTLEVILNTLQDLDYYIDYRVLNALNFGLPQKRERIFIVGFRESRG 180
Query: 182 FRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPD 214
F P P L +T I + + D
Sbjct: 181 FIW----------PKPALSRTSLTEILEENVSD 203
>gi|189339547|pdb|2UZ4|A Chain A, Hhai Dna Methyltransferase R165n Mutant Complex With 13mer
Gcgc-Gmgc Oligonucleotide And Sah
Length = 327
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 148/384 (38%), Gaps = 80/384 (20%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
R ++ ++G+GG R +L A+ V + + + A +VYE+NFG +P +G+I +
Sbjct: 11 GLRFIDLFAGLGGFRLAL--ESCGAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNEK 67
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ H L + PCQ ++ G QK D+R F I ++ K P ++F+ENV
Sbjct: 68 TIP---DHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMENVK 122
Query: 131 GFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
F + D + +E++ N+ DY +L+ L +G+P R + + R
Sbjct: 123 NFASHD-NGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRENIYMICFRND------- 174
Query: 187 LNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 246
LN Q + P P N T + PD + L+ ++R D V T
Sbjct: 175 LNIQNFQFPKPFELN---TFVKDLLLPDSEVEHLV-----IDR-------KDLVMTNQEI 219
Query: 247 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 306
T V L ++ + G I S R T S
Sbjct: 220 EQTTPKTVR-----------------------LGIVGKGGQGERIY---STRGIAITLSA 253
Query: 307 YRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRY 366
Y G G T L R PRE A + +P ++ H S Q Y
Sbjct: 254 Y----GGGIFAKT--------GGYLVNGKTRKLHPRECARVMGYPDSYKV--HPSTSQAY 299
Query: 367 ALLGNSLSIAVVAPLLQYLFAQAG 390
GNS+ I V LQY+ G
Sbjct: 300 KQFGNSVVINV----LQYIAYNIG 319
>gi|189096047|pdb|2UYC|A Chain A, Hhai Dna Methyltransferase R163n Mutant Complex With 13mer
Gcgc-Gmgc Oligonucleotide And Sah
Length = 327
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 148/384 (38%), Gaps = 80/384 (20%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
R ++ ++G+GG R +L A+ V + + + A +VYE+NFG +P +G+I +
Sbjct: 11 GLRFIDLFAGLGGFRLAL--ESCGAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNEK 67
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ H L + PCQ ++ G QK D+R F I ++ K P ++F+ENV
Sbjct: 68 TIP---DHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMENVK 122
Query: 131 GFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
F + D + +E++ N+ DY +L+ L +G+P R + + R
Sbjct: 123 NFASHD-NGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKNERIYMICFRND------- 174
Query: 187 LNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 246
LN Q + P P N T + PD + L+ ++R D V T
Sbjct: 175 LNIQNFQFPKPFELN---TFVKDLLLPDSEVEHLV-----IDR-------KDLVMTNQEI 219
Query: 247 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 306
T V L ++ + G I S R T S
Sbjct: 220 EQTTPKTVR-----------------------LGIVGKGGQGERIY---STRGIAITLSA 253
Query: 307 YRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRY 366
Y G G T L R PRE A + +P ++ H S Q Y
Sbjct: 254 Y----GGGIFAKT--------GGYLVNGKTRKLHPRECARVMGYPDSYKV--HPSTSQAY 299
Query: 367 ALLGNSLSIAVVAPLLQYLFAQAG 390
GNS+ I V LQY+ G
Sbjct: 300 KQFGNSVVINV----LQYIAYNIG 319
>gi|160877870|pdb|2Z6U|A Chain A, Ternary Structure Of The Glu119ala M.Hhai, C5-Cytosine Dna
Methyltransferase, With Unmodified Dna And Adohcy
Length = 327
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 148/384 (38%), Gaps = 80/384 (20%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
R ++ ++G+GG R +L A+ V + + + A +VYE+NFG +P +G+I +
Sbjct: 11 GLRFIDLFAGLGGFRLAL--ESCGAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNEK 67
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ H L + PCQ ++ G QK D+R F I ++ K P ++F+ NV
Sbjct: 68 TIP---DHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMANVK 122
Query: 131 GFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
F + D + +E++ N+ DY +L+ L +G+P R R + + R
Sbjct: 123 NFASHD-NGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRND------- 174
Query: 187 LNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 246
LN Q + P P N T + PD + L+ ++R D V T
Sbjct: 175 LNIQNFQFPKPFELN---TFVKDLLLPDSEVEHLV-----IDR-------KDLVMTNQEI 219
Query: 247 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 306
T V L ++ + G I S R T S
Sbjct: 220 EQTTPKTVR-----------------------LGIVGKGGQGERIY---STRGIAITLSA 253
Query: 307 YRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRY 366
Y G G T L R PRE A + +P ++ H S Q Y
Sbjct: 254 Y----GGGIFAKT--------GGYLVNGKTRKLHPRECARVMGYPDSYKV--HPSTSQAY 299
Query: 367 ALLGNSLSIAVVAPLLQYLFAQAG 390
GNS+ I V LQY+ G
Sbjct: 300 KQFGNSVVINV----LQYIAYNIG 319
>gi|67924690|ref|ZP_00518097.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67853467|gb|EAM48819.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 420
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 16/170 (9%)
Query: 16 LEFYSGIGGMRYSL----MKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
++ ++GIGGMR L K ++ + + + +I+ KA + Y LNF P QG+I+N+
Sbjct: 5 IDLFAGIGGMRLGLELACKKLNIETRCILSSEIDYKACETYALNFDEIP-QGDIKNI--- 60
Query: 72 ELDMYGAHAWLLS-PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
D + ++L+ PCQP++ G + D R F ++ E I KP L +ENV
Sbjct: 61 --DKISSFNFILAGSPCQPFSYAGKHQGFGDTRGTLFFEV-ERILDKYKPDGFL-LENVR 116
Query: 131 GFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
G T D T +I L + DY + F+L+ F VP +R R + + K+
Sbjct: 117 GLVTHDKGRTLKTIINKLNDLDYSVEYFLLNSSNFNVPQNRVRIYIVGKK 166
>gi|425450148|ref|ZP_18829980.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 7941]
gi|389769132|emb|CCI05932.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 7941]
Length = 331
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
D + R ++ + G+GG R ++ + ++ + V + DI+ A +Y NFG +P +G+
Sbjct: 6 DSKKIRFVDLFCGLGGFRVAIERVCRQKNLESDCVFSCDIDKDAQAIYHANFGDQP-RGD 64
Query: 65 IQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
I + A LD+ + PCQP++ G K D R F +I ++ K P
Sbjct: 65 ITEIAA--LDIPNHDILMAGFPCQPFSICGNLKGFEDTRGTLFFEIARIL--KAKQPAAF 120
Query: 125 FVENVV---GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ENV G + T +++ L + DY +L+ L FG+P R R F + R+
Sbjct: 121 ILENVKQLQGHQQGKTLQVILDTLQDLDYYIDYRVLNALNFGLPQKRERIFIVGFREARG 180
Query: 182 FRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPD 214
F P P L +T I + + D
Sbjct: 181 FIW----------PKPALSRQSLTEILEENVSD 203
>gi|282899236|ref|ZP_06307209.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii
CS-505]
gi|281195872|gb|EFA70796.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii
CS-505]
Length = 422
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 18/171 (10%)
Query: 14 RVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
R ++ ++GIGGMR +A V + V + +I+ KA + Y++NF +P +G+I+
Sbjct: 3 RFIDLFAGIGGMRLGFQQACDVLGVEYECVLSSEIDKKAVETYKINFDDQP-RGDIR--- 58
Query: 70 AAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
E+D+ ++L+ PCQP++ G Q+ D R F +I L+ T P +EN
Sbjct: 59 --EIDIMPEFDFMLAGFPCQPFSYAGKQQGFGDTRGTLFFEIERLL--TSYQPEAFLLEN 114
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLA 175
V G T D H + + NS Y +L+ FGVP +R R + L
Sbjct: 115 VRGLTTHD-HGRTFNTIINSLEKLGYGIHYLLLNSSNFGVPQNRVRIYILG 164
>gi|307152213|ref|YP_003887597.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
gi|306982441|gb|ADN14322.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
Length = 317
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 13/186 (6%)
Query: 4 DMCKNDGEAWRVLEFYSGIGGMRYS----LMKADVSAQVVEAFDINDKANDVYELNFGHR 59
D+ K + + R ++ + GIGG R + ++ ++ Q V + DI+ A VY FG +
Sbjct: 5 DVVKGE-KVIRYIDLFCGIGGFRIAASQVCLEYNIKPQCVFSSDIDPDAQQVYSKYFGEK 63
Query: 60 PYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
P G+I + A + + H L PCQP++ G+ K D R F +I ++ + K
Sbjct: 64 P-AGDITKIPADSIPDH--HLLLAGFPCQPFSICGVLKGFEDTRGTLFFEIARILEY--K 118
Query: 120 PPHMLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
P +ENV G + T +I+IL Y IL+ L FG+P R R F +
Sbjct: 119 KPLAFVLENVKQLFGHQQGKTLKVIIDILEKLGYNVTYKILNALDFGLPQKRERIFIVGC 178
Query: 177 RKPLSF 182
+P+ F
Sbjct: 179 LEPIPF 184
>gi|158431504|pdb|2Z6Q|A Chain A, Ternary Structure Of Arg165ala M.Hhai C5-Cytosine Dna
Methyltransferase With Unmodified Dna And Adohcy
Length = 327
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 148/384 (38%), Gaps = 80/384 (20%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
R ++ ++G+GG R +L A+ V + + + A +VYE+NFG +P +G+I +
Sbjct: 11 GLRFIDLFAGLGGFRLAL--ESCGAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNEK 67
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ H L + PCQ ++ G QK D+R F I ++ K P ++F+ENV
Sbjct: 68 TIP---DHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMENVK 122
Query: 131 GFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
F + D + +E++ N+ DY +L+ L +G+P R + + R
Sbjct: 123 NFASHD-NGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKREAIYMICFRND------- 174
Query: 187 LNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 246
LN Q + P P N T + PD + L+ ++R D V T
Sbjct: 175 LNIQNFQFPKPFELN---TFVKDLLLPDSEVEHLV-----IDR-------KDLVMTNQEI 219
Query: 247 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 306
T V L ++ + G I S R T S
Sbjct: 220 EQTTPKTVR-----------------------LGIVGKGGQGERIY---STRGIAITLSA 253
Query: 307 YRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRY 366
Y G G T L R PRE A + +P ++ H S Q Y
Sbjct: 254 Y----GGGIFAKT--------GGYLVNGKTRKLHPRECARVMGYPDSYKV--HPSTSQAY 299
Query: 367 ALLGNSLSIAVVAPLLQYLFAQAG 390
GNS+ I V LQY+ G
Sbjct: 300 KQFGNSVVINV----LQYIAYNIG 319
>gi|422304470|ref|ZP_16391815.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9806]
gi|389790376|emb|CCI13741.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9806]
Length = 324
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
D + R ++ + G+GG R ++ + ++ + V + DI+ A +Y NF +P +G+
Sbjct: 6 DSKKIRFIDLFCGLGGFRVAIERVCRQKNLESDCVFSCDIDKDAQAIYHANFNDQP-RGD 64
Query: 65 IQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
I + A LD+ + PCQP++ G K D R F +I ++ K P
Sbjct: 65 ITEIAA--LDIPNHDILMAGFPCQPFSICGDLKGFEDTRGTLFFEIARILK--AKQPAAF 120
Query: 125 FVENVV---GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ENV G + T +++ L + DY T +L+ L FG+P R R F + R+
Sbjct: 121 ILENVKQLQGHQQGKTLQVILDTLQDLDYYTDYRVLNALNFGLPQKRERIFIVGFREARG 180
Query: 182 FRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPD 214
F P P L +T I + + D
Sbjct: 181 FIW----------PKPALSRTSLTEILEENVSD 203
>gi|1171048|sp|P25263.2|MTC1_HERAU RecName: Full=Modification methylase HgiCI; Short=M.HgiCI; AltName:
Full=Cytosine-specific methyltransferase HgiCI
gi|515372|emb|CAA38933.1| methyltransferase [Herpetosiphon aurantiacus]
Length = 420
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 170/423 (40%), Gaps = 58/423 (13%)
Query: 14 RVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
+ ++ ++GIGGMR +A + V + +I+ A Y +NF H QG+I
Sbjct: 3 KFIDLFAGIGGMRLGFEQAMHELGIETACVLSSEIDKHAQTTYAMNF-HEQSQGDI---- 57
Query: 70 AAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
++ + + +LL+ PCQP++ G QK D R F +I E I +P L +EN
Sbjct: 58 -TQIQDFPSFDFLLAGFPCQPFSYAGKQKGFGDTRGTLFFEI-ERILKAYRPKGFL-LEN 114
Query: 129 VVGFETSDTHAKMIEILANSDYLTQE--FILSPLQFGVPYSRPRYFC--LAKRKPL---- 180
V G T D IL L IL+ F VP +R R + L + +P
Sbjct: 115 VRGLTTHDKGRTFKTILQKLHELNYGVYLILNSSNFQVPQNRLRVYIVGLDQSQPELTIT 174
Query: 181 -------SFRCQLLNNQ--LLRSPSPLLGNDDMT--VITKHDQPDDSWDKLLESCD-PV- 227
S + + L+NQ L + +L D + + K++ D +KLL P+
Sbjct: 175 SHIGATDSHKFKQLSNQASLFDTNKIMLVRDILEDHPLDKYNCSTDFVNKLLAFIGHPIK 234
Query: 228 ---ERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIER 284
+R +++ N + E G T+ F A + L+ IE+
Sbjct: 235 LNGKRLIDYRNGNSIHSWELGIKGECTSDEIQFMNALIANRRKKHFGAHQDGKKLT-IEQ 293
Query: 285 WGSAMDIVYPDSKRCCCFTKSYYRYVKGT------------------GSLLATVQPKNKG 326
+ + DS TK Y + V G S+ T+ +
Sbjct: 294 IKTFFEHDDLDSIMQSLITKGYLQEVNGRFNPVAGNMSFEVFKFLDPDSVSITLVSSDAH 353
Query: 327 KASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
K + + +R TPRE A L FP FQF SL Y GNS+S+ VV ++ LF
Sbjct: 354 KIGVVHQNRIRRITPRECARLQGFPDSFQFHPKDSL--AYRQFGNSVSVPVVKAVILDLF 411
Query: 387 AQA 389
A
Sbjct: 412 KSA 414
>gi|118138268|pdb|2I9K|A Chain A, Engineered Extrahelical Base Destabilization Enhances
Sequence Discrimination Of Dna Methyltransferase M.Hhai
Length = 327
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 148/384 (38%), Gaps = 80/384 (20%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
R ++ ++G+GG R +L A+ V + + + A +VYE+NFG +P +G+I +
Sbjct: 11 GLRFIDLFAGLGGFRLAL--ESCGAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNEK 67
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ H L + PCQ ++ G QK D+R F I ++ K P ++F+ENV
Sbjct: 68 TIP---DHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMENVK 122
Query: 131 GFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
+ D + +E++ N+ DY +L+ L +G+P R R + + R
Sbjct: 123 NAASHD-NGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRND------- 174
Query: 187 LNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 246
LN Q + P P N T + PD + L+ ++R D V T
Sbjct: 175 LNIQNFQFPKPFELN---TFVKDLLLPDSEVEHLV-----IDR-------KDLVMTNQEI 219
Query: 247 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 306
T V L ++ + G I S R T S
Sbjct: 220 EQTTPKTVR-----------------------LGIVGKGGQGERIY---STRGIAITLSA 253
Query: 307 YRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRY 366
Y G G T L R PRE A + +P ++ H S Q Y
Sbjct: 254 Y----GGGIFAKT--------GGYLVNGKTRKLHPRECARVMGYPDSYKV--HPSTSQAY 299
Query: 367 ALLGNSLSIAVVAPLLQYLFAQAG 390
GNS+ I V LQY+ G
Sbjct: 300 KQFGNSVVINV----LQYIAYNIG 319
>gi|159795737|pdb|2Z6A|A Chain A, S-Adenosyl-L-Methionine-Dependent Methyl Transfer:
Observable Precatalytic Intermediates During Dna
Cytosine Methylation
Length = 327
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 148/384 (38%), Gaps = 80/384 (20%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
R ++ ++G+GG R +L A+ V + + + A +VYE+NFG +P +G+I +
Sbjct: 11 GLRFIDLFAGLGGFRLAL--ESCGAECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNEK 67
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ H L + P Q ++ G QK D+R F I ++ K P ++F+ENV
Sbjct: 68 TIP---DHDILCAGFPAQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMENVK 122
Query: 131 GFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
F + D + +E++ N+ DY +L+ L +G+P R R + + R
Sbjct: 123 NFASHD-NGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRND------- 174
Query: 187 LNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 246
LN Q + P P N T + PD + L+ ++R D V T
Sbjct: 175 LNIQNFQFPKPFELN---TFVKDLLLPDSEVEHLV-----IDR-------KDLVMTNQEI 219
Query: 247 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 306
T V L ++ + G I S R T S
Sbjct: 220 EQTTPKTVR-----------------------LGIVGKGGQGERIY---STRGIAITLSA 253
Query: 307 YRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRY 366
Y G G T L R PRE A + +P ++ H S Q Y
Sbjct: 254 Y----GGGIFAKT--------GGYLVNGKTRKLHPRECARVMGYPDSYKV--HPSTSQAY 299
Query: 367 ALLGNSLSIAVVAPLLQYLFAQAG 390
GNS+ I V LQY+ G
Sbjct: 300 KQFGNSVVINV----LQYIAYNIG 319
>gi|309804726|ref|ZP_07698791.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
09V1-c]
gi|312871535|ref|ZP_07731628.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
3008A-a]
gi|325913106|ref|ZP_08175476.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B]
gi|308166118|gb|EFO68336.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
09V1-c]
gi|311092930|gb|EFQ51281.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
3008A-a]
gi|325477527|gb|EGC80669.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B]
Length = 336
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 150/381 (39%), Gaps = 77/381 (20%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ ++GIGG R +L A+ V + + + A + Y +NFG P +G+I +
Sbjct: 10 KGYKFIDLFAGIGGFRLAL--ESFGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQVDE 66
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ H L + PCQP++ G Q D+R F + ++ K P ++F+ENV
Sbjct: 67 TRIP---DHDILCAGFPCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENV 121
Query: 130 VGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
F T D K I ++ N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 122 KNFATHDG-GKTISVVKNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDIE---- 176
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDS-WDKLLESCDPVERFLEFSNSGDQVNTET 244
+L P P N + PD+ D ++ D V D+VN
Sbjct: 177 ---RELFVFPQPFKLN---RFVEDFLLPDNEVRDLIVNRTDLV--------LNDKVNINY 222
Query: 245 GFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTK 304
ST G E + + ++I + +G + F K
Sbjct: 223 NSPSTIRVGTVGKGGQGERIYSPKGIAI--------TLSAYGGGV------------FAK 262
Query: 305 SYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQ 364
TG L Q R PRE A + FP F+ + ++ Q
Sbjct: 263 --------TGGYLINGQT--------------RRLHPRECARIMGFPDSFKL--NPNMNQ 298
Query: 365 RYALLGNSLSIAVVAPLLQYL 385
Y LGNS+ + V+ + Q +
Sbjct: 299 AYKQLGNSVVVDVLQLITQQI 319
>gi|319407456|emb|CBI81106.1| Cytosine-specific methyltransferase NlaX [Bartonella sp. 1-1C]
Length = 307
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADV--SAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+R+++ ++GIGG+R A + Q + +I+ + Y+LNF + G+I +
Sbjct: 2 YRIIDLFAGIGGIRLGFESAFGLNNTQCIFTSEIDKYSIQTYKLNFNNDYVHGDITQIHE 61
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E+ H LL+ PCQP+++ GL+K +DAR F I ++ H + P +ENV
Sbjct: 62 EEIP---KHDILLAGFPCQPFSQAGLKKGFADARGTLFFDINRILSH--RKPRAFLLENV 116
Query: 130 ---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
G + T ++++E L S Y IL FGVP +R R + +
Sbjct: 117 KQLKGHDKGRTLSRIVEHLQLSGYKVFYDILKARDFGVPQNRERIYIVG 165
>gi|288559284|ref|YP_003422770.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1]
gi|288541994|gb|ADC45878.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1]
Length = 339
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 19/200 (9%)
Query: 4 DMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG 63
D + + + + ++ +SGIGG R + V + V + DI+ AN+ Y +NFG P+ G
Sbjct: 21 DETEENDKDFTFIDLFSGIGGFRLAF--ESVGGKCVFSSDIDKWANETYYMNFGEYPH-G 77
Query: 64 NIQNLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH 122
+I + A ++ H L + PCQP++ G +K D R F +I ++ K P
Sbjct: 78 DISEIPANQIP---DHDILCAGFPCQPFSIGGYRKGFCDTRGTLFFEIERIL--KAKKPQ 132
Query: 123 MLFVENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK- 178
M +ENV G D T + E L N Y +L+ +GVP +R R F + +
Sbjct: 133 MFLLENVKGLTNHDKGKTFKVIKESLWNLGYSIFYQVLNSKDYGVPQNRERIFIVGFKDN 192
Query: 179 ------PLSFRCQLLNNQLL 192
PL F + N LL
Sbjct: 193 VNTFKFPLPFENKANINDLL 212
>gi|119488852|ref|ZP_01621814.1| NgoIM [Lyngbya sp. PCC 8106]
gi|119455013|gb|EAW36155.1| NgoIM [Lyngbya sp. PCC 8106]
Length = 385
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 11/169 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ +E ++GIGG R + A++ + V A D ++ + VYE NFG + ++T +L
Sbjct: 2 KAIELFAGIGGFRLGMKGANI--ETVWANDSSELSCRVYESNFGQNSIV--LADITQIDL 57
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVENVVG 131
H +L + PCQP++ G ++ D R F +I+E+I K P +ENV
Sbjct: 58 SDIPHHDFLTAGFPCQPFSPAGKKQGIRDQVRGTLFERIVEIIKD--KQPQYFLLENVKR 115
Query: 132 FETSDT--HAKMI-EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
T + H ++I LA DYL + +++PL FG+P +R R F L +
Sbjct: 116 ILTMEQGYHFRVILNALATLDYLIEWRLINPLHFGIPQNRDRVFILGTK 164
>gi|67922277|ref|ZP_00515790.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67855853|gb|EAM51099.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 226
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 19/182 (10%)
Query: 14 RVLEFYSGIGGMR---------YSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
+ ++ + GIGG R Y + + V + DI+ A YE NF +P QG+
Sbjct: 17 KYIDLFCGIGGFRIALELVCSHYKFKEHKIKPICVFSSDIDADAQKNYEANFKDKP-QGD 75
Query: 65 IQNLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHM 123
I T +++ H LL+ PCQ ++ G + D R F I ++ + P+
Sbjct: 76 I---TQIPVELIPNHNLLLAGFPCQTFSICGKLQGFEDTRGTLFFDIARVLDY--HKPYA 130
Query: 124 LFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
+ENV VG T ++EIL++ Y T+ +L+ L FG+P R R F + R PL
Sbjct: 131 FILENVKQLVGHNKGKTLNTILEILSDLGYYTEYKVLNALDFGLPQKRERIFIIGLRDPL 190
Query: 181 SF 182
+F
Sbjct: 191 NF 192
>gi|317473510|ref|ZP_07932802.1| C-5 cytosine-specific DNA methylase [Anaerostipes sp. 3_2_56FAA]
gi|316899021|gb|EFV21043.1| C-5 cytosine-specific DNA methylase [Anaerostipes sp. 3_2_56FAA]
Length = 385
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA--E 72
++ ++G GGM A + +V AF+ D A YE NF H ++ ++ N+ +A +
Sbjct: 3 TVDLFAGCGGMSLGFQNAGFN--LVAAFEFWDIAAKCYEENFNHPVFKSDLSNVKSAVEQ 60
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDAR-AFSFLKILELIPHTVKPPHMLFVENVVG 131
+ + + PPCQ ++ G + +SS A S+ KI+E I P +ENV
Sbjct: 61 IRRFSPELIIGGPPCQDFSHAGKRVESSRASLTESYAKIIENIK-----PQYFVMENVDR 115
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
+ S K I N+ Y + +L + GVP R R+FC+
Sbjct: 116 AQKSKAFEKAENIFKNAGYGLTKIVLDASKCGVPQKRKRFFCIG 159
>gi|259500984|ref|ZP_05743886.1| modification methylase EcoRII [Lactobacillus iners DSM 13335]
gi|302190566|ref|ZP_07266820.1| DNA-cytosine methyltransferase [Lactobacillus iners AB-1]
gi|259167678|gb|EEW52173.1| modification methylase EcoRII [Lactobacillus iners DSM 13335]
Length = 336
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ ++GIGG R +L A+ V + + + A + Y++NFG P +G+I +
Sbjct: 10 KGYKFIDLFAGIGGFRLAL--ESFGAKCVYSNEWDKFAQETYQMNFGDTP-EGDITQVDE 66
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ H L + PCQP++ G Q D+R F + ++ K P ++F+ENV
Sbjct: 67 TSIP---DHDILCAGFPCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENV 121
Query: 130 VGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
F T D K I ++ N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 122 KNFATHDG-GKTIRVVKNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDI 175
>gi|416406066|ref|ZP_11688038.1| Type II modification methyltransferase HpaII [Crocosphaera watsonii
WH 0003]
gi|357261153|gb|EHJ10455.1| Type II modification methyltransferase HpaII [Crocosphaera watsonii
WH 0003]
Length = 420
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 16/170 (9%)
Query: 16 LEFYSGIGGMRYSL----MKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
++ ++GIGGMR L K ++ + + + +I+ KA + Y LNF P QG+I+N+
Sbjct: 5 IDLFAGIGGMRLGLELACKKLNIETRCILSSEIDYKACETYALNFDEIP-QGDIKNI--- 60
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
D + ++L+ PCQP++ G + D R F ++ E I KP L +ENV
Sbjct: 61 --DKISSFNFILAGFPCQPFSYAGKHQGFGDTRGTLFFEV-ERILDKYKPDGFL-LENVR 116
Query: 131 GFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
G T D T +I L + DY + +L+ F VP +R R + + K+
Sbjct: 117 GLVTHDKGRTLKTIINKLNDLDYSVEYLLLNSSNFNVPQNRVRIYIVGKK 166
>gi|225571452|ref|ZP_03780448.1| hypothetical protein CLOHYLEM_07550 [Clostridium hylemonae DSM
15053]
gi|225159928|gb|EEG72547.1| hypothetical protein CLOHYLEM_07550 [Clostridium hylemonae DSM
15053]
Length = 377
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 22/180 (12%)
Query: 14 RVLEFYSGIGGMRYS----LMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
R ++ + GIGG RY+ K D+ + V + DI+ A YE NFG RP G+I +
Sbjct: 75 RYIDLFCGIGGFRYASQYAFDKLDLEGKCVFSSDIDKYAQVSYEANFGERP-MGDITKIE 133
Query: 70 AAELD----MYGAHAWLLSPPCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHML 124
A+E+ ++G PCQ ++ GLQK +D + F I +I K P
Sbjct: 134 ASEIPDFDILFGGF------PCQAFSICGLQKGFADNTKGTLFFDIARIIKE--KQPQAF 185
Query: 125 FVENVVGFETSD---THAKMIEILANS-DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
+ENV + D T ++E+L + Y +L+ L FG+P R R + +KP
Sbjct: 186 VLENVKNLASHDNGKTLKTILEVLRDELGYHVDYKLLNALDFGLPQKRERIIIIGSKKPF 245
>gi|423284632|ref|ZP_17263515.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fragilis HMW 615]
gi|404579823|gb|EKA84536.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fragilis HMW 615]
Length = 343
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 162/389 (41%), Gaps = 72/389 (18%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ + GIGG R ++ + V + V + D + A YE NF P G+I+ +
Sbjct: 3 KKYKGIDLFCGIGGFRLAMNSSQV--ECVFSSDNDKFAQQTYEANFHEVP-TGDIKAVN- 58
Query: 71 AELDMYGAHAWLLSPPCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
E D+ PCQP++ +QG + F +ILE KPP M+F+
Sbjct: 59 -EKDIPSFDILTAGFPCQPFSYAGEKQGFNDEVRGTLFFDVCRILEY----HKPP-MVFL 112
Query: 127 ENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
ENV G ++ D T +++ L Y ILS L +G+P R R++C+A R + F
Sbjct: 113 ENVKGLKSHDNGKTLQTVLDTLKKLGYYPHWTILSSLDYGLPQKRERWYCVAFRTEVDFE 172
Query: 184 C--QLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVN 241
+ + +LR + + I K + D D + P +R ++ NS + N
Sbjct: 173 WPKPVKGHPVLRDIIDMNDRNPSLAIPKFEL--DRIDYHFANAKPGDR-IQHDNSKYKPN 229
Query: 242 TETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVP--LSLIERWGSAMDIVYPDSKRC 299
T+ G V F A+ ++ H P + E + S +D
Sbjct: 230 TK-----KGKYGVFSFQKADGSLRF-------HVGDPAKTQIQEAFYSCLDTY------- 270
Query: 300 CCFTKSYYRYVKGTGSLLATVQPK---NKGKASSLKEQHLRYFTPREVANLHSFPGDFQF 356
+++A PK + K S L+ + L+ FP DF F
Sbjct: 271 -------------ASTIIANRTPKLWDIRRKLSVLESKRLQ-----------GFPDDFVF 306
Query: 357 PHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
P +S Q Y LGNS+S+ ++ ++ +
Sbjct: 307 P--VSDAQAYKQLGNSVSVPIIVTIMNNM 333
>gi|85709931|ref|ZP_01040996.1| Type II restriction-modification system methylation subunit
[Erythrobacter sp. NAP1]
gi|85688641|gb|EAQ28645.1| Type II restriction-modification system methylation subunit
[Erythrobacter sp. NAP1]
Length = 370
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 34/196 (17%)
Query: 6 CKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNI 65
+N + ++ ++GIGGMR ++ + + + + A D YELNFGHRP G+I
Sbjct: 15 VRNANRRFTFIDLFAGIGGMRIPF--DELGGECTFSSEWDKFAQDTYELNFGHRP-NGDI 71
Query: 66 QNLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
+ A+E+ GAH LL PCQ ++ GL++ D R F +I ++ P M
Sbjct: 72 TKIDASEV---GAHDILLGGFPCQAFSNAGLKQGFLDTRGTMFFEIQRILAEW--RPRMF 126
Query: 125 FVENVV---GFETSDTHAKMIEILANSD----------------------YLTQEFILSP 159
+ENV G + T ++ ILA D Y +L+
Sbjct: 127 LLENVKQLRGHDGGRTLDTILSILAGKDSRVPDNVPMSLEARRSLSRKLNYSVGYQVLAA 186
Query: 160 LQFGVPYSRPRYFCLA 175
+FGVP R R + +
Sbjct: 187 TEFGVPQKRERVYIVG 202
>gi|402300660|ref|ZP_10820134.1| DNA-cytosine methyltransferase [Bacillus alcalophilus ATCC 27647]
gi|401724193|gb|EJS97577.1| DNA-cytosine methyltransferase [Bacillus alcalophilus ATCC 27647]
Length = 349
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 12/174 (6%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ + ++ ++GIGG + L A+ V A + + A Y NFG P +G+I + A
Sbjct: 12 KGMKYVDLFAGIGG--FHLAMKSFGAECVYASEWDKHAQTTYSANFGIHP-EGDITQIEA 68
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+E+ H L + PCQP++ G ++ D R F + ++ H P ++F+ENV
Sbjct: 69 SEIPQ---HDILCAGFPCQPFSISGKRQGFEDTRGTLFFDVARIVKH--HQPKLVFMENV 123
Query: 130 VGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
F T D T + E L Y +L+ QFG+P +R R + +A RK L
Sbjct: 124 RNFATHDQGNTLNTVRETLEQIGYKFWHQVLNASQFGLPQNRERIYMVAIRKDL 177
>gi|119026301|ref|YP_910146.1| DNA-methyltransferase MKpn2kI [Bifidobacterium adolescentis ATCC
15703]
gi|118765885|dbj|BAF40064.1| DNA-methyltransferase MKpn2kI [Bifidobacterium adolescentis ATCC
15703]
Length = 383
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 85/174 (48%), Gaps = 12/174 (6%)
Query: 7 KNDGEA-WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNI 65
KN EA +R ++ ++GIGG R + +VV + +IN + Y NFG P G+I
Sbjct: 66 KNPDEADYRSIDLFAGIGGTRLGFQETG-RVKVVFSSEINKFSAKTYHANFGEYP-AGDI 123
Query: 66 QNLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
+ A+++ H L+ PCQ +++ GL+K DAR F +I ++ K P
Sbjct: 124 TQIAASDIP---DHDILVGGFPCQAFSQAGLKKGFEDARGTMFFEIARILKE--KRPKAF 178
Query: 125 FVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
+ENV VG + +T + IL Y +L+ FGVP +R R + +
Sbjct: 179 LLENVKNLVGHDHGNTFRTIKSILEGLGYAVNAKVLAAKDFGVPQNRERIYIVG 232
>gi|434381477|ref|YP_006703260.1| cytosine-specific DNA-methyltransferase [Brachyspira pilosicoli
WesB]
gi|404430126|emb|CCG56172.1| cytosine-specific DNA-methyltransferase [Brachyspira pilosicoli
WesB]
Length = 417
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++GIGG +L K + + V A +I+ D Y NFG PY G+I N++ ++
Sbjct: 2 KFIDLFAGIGGFHLALNK--LGYECVFASEIDTILQDTYNKNFGIIPY-GDISNISLKDI 58
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
H L S PCQP+++ G +K++ DAR L +E I KP + +ENV F
Sbjct: 59 P---KHDILCSGFPCQPFSKAGERKETEDARGL-LLNYVEKIILNHKPSFFI-LENVERF 113
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
S + S Y Q I+SP Q G+P RPR F + ++
Sbjct: 114 GKSKLKKDFTNKVE-SLYNIQYVIVSPDQLGIPQHRPRIFIIGQK 157
>gi|325912401|ref|ZP_08174796.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII
143-D]
gi|325475743|gb|EGC78914.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII
143-D]
Length = 336
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ ++GIGG R +L A+ V + + + A + Y++NFG P +G+I +
Sbjct: 10 KGYKFIDLFAGIGGFRLAL--ESFGAKCVYSNEWDRFAQETYQMNFGDTP-EGDITQVDE 66
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ H L + PCQP++ G Q D+R F + ++ K P ++F+ENV
Sbjct: 67 TSIP---DHDILCAGFPCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENV 121
Query: 130 VGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
F T D K I ++ N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 122 KNFATHDG-GKTISVVKNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDI 175
>gi|294661528|ref|YP_003579981.1| hypothetical protein KP-KP15_gp115 [Klebsiella phage KP15]
gi|292660689|gb|ADE34937.1| hypothetical protein [Klebsiella phage KP15]
Length = 308
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
++++ +G+GG+R KA + + +I+ A Y N+G QG+I T E
Sbjct: 2 KIIDLCAGVGGVRLGFDKAFGGVECLLTSEIDKHAQQTYADNWGDENIQGDI--FTIDEN 59
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
D+ L PCQ +++ GL++ D R +IL +I K P +LF ENV
Sbjct: 60 DVPDHDILLAGFPCQAFSKAGLKQGMLDPRGTIIFEILRII--RAKKPSVLFFENVPQLL 117
Query: 134 TSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
T D T + +L + Y +++ FG+P R R F + R P+ F
Sbjct: 118 THDKGNTFKTIYRLLQDEGYDIHYQVMNTKDFGLPQRRERVFIVCFRDPVFF 169
>gi|315653956|ref|ZP_07906872.1| modification methylase EcoRII [Lactobacillus iners ATCC 55195]
gi|315488652|gb|EFU78298.1| modification methylase EcoRII [Lactobacillus iners ATCC 55195]
Length = 336
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 14/175 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ ++GIGG R +L A+ V + + + A + Y +NFG P +G+I +
Sbjct: 10 KGYKFIDLFAGIGGFRLAL--ESFGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQVDE 66
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ H L + PCQP++ G Q D+R F + ++ K P ++F+ENV
Sbjct: 67 TRIP---DHDILCAGFPCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENV 121
Query: 130 VGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
F T D K I ++ N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 122 KNFATHDG-GKTIRVVKNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDI 175
>gi|434398940|ref|YP_007132944.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
gi|428270037|gb|AFZ35978.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
Length = 446
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 14 RVLEFYSGIGGMRYSL----MKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
R ++ ++GIGGMR L K D+S + V +I + A Y+ NF G++ ++
Sbjct: 6 RFIDLFAGIGGMRQGLENACQKMDISTKCVFTSEIKEHAITTYQENFSVNKIYGDLTKIS 65
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E+ + L PCQP++ G ++ D R F +I +++ K P +ENV
Sbjct: 66 NVEIPDF--DILLAGFPCQPFSSAGTRQGFLDTRGTLFFEIEKIL--QAKQPFGFLLENV 121
Query: 130 VGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPR-YFCLAKRKPLSF--- 182
G D T ++ L DY +L+ FG+P R R Y K+ P+S
Sbjct: 122 EGLVKHDRGRTLGTILNKLEQLDYHVTWKVLNAKNFGIPQDRKRIYIAGNKKHPISLEFS 181
Query: 183 -RCQLLNNQLLRSPSPLLGNDDMTVITKH 210
+ Q+L + P+L D + + H
Sbjct: 182 NQKQVLLKNIFEIGKPVLTTDLIQRLLSH 210
>gi|349611852|ref|ZP_08891082.1| modification methylase HhaI [Lactobacillus sp. 7_1_47FAA]
gi|348608317|gb|EGY58302.1| modification methylase HhaI [Lactobacillus sp. 7_1_47FAA]
Length = 336
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 14/172 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ ++GIGG R +L A+ V + + + A + Y +NFG P +G+I +
Sbjct: 10 KGYKFIDLFAGIGGFRLAL--ESFGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQIDE 66
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ H L + PCQP++ G Q D+R F + ++ K P ++F+ENV
Sbjct: 67 TSIP---DHDILCAGFPCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENV 121
Query: 130 VGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
F T D K I ++ N+ Y Q +L+P+ +G+P R R + + R
Sbjct: 122 KNFATHDG-GKTISVVKNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFR 172
>gi|312874304|ref|ZP_07734336.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2052A-d]
gi|311090177|gb|EFQ48589.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2052A-d]
Length = 336
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 14/175 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ ++GIGG R +L A+ V + + + A + Y +NFG P +G+I +
Sbjct: 10 KGYKFIDLFAGIGGFRLAL--ESFGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQVDE 66
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ H L + PCQP++ G Q D+R F + ++ K P ++F+ENV
Sbjct: 67 TRIP---DHDILCAGFPCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENV 121
Query: 130 VGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
F T D K I ++ N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 122 KNFATHDG-GKTIRVVKNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDI 175
>gi|312874943|ref|ZP_07734962.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2053A-b]
gi|311089688|gb|EFQ48113.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2053A-b]
Length = 336
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 14/176 (7%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ ++GIGG R +L A+ V + + + A + Y +NFG P +G+I +
Sbjct: 10 KGYKFIDLFAGIGGFRLAL--ESFGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQVDE 66
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ H L + PCQP++ G Q D+R F + ++ K P ++F+ENV
Sbjct: 67 TRIP---DHDILCAGFPCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENV 121
Query: 130 VGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
F T D K I ++ N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 122 KNFATHDG-GKTIRVVKNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDIK 176
>gi|309808410|ref|ZP_07702309.1| putative modification methylase HhaI [Lactobacillus iners LactinV
01V1-a]
gi|308168238|gb|EFO70357.1| putative modification methylase HhaI [Lactobacillus iners LactinV
01V1-a]
Length = 198
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 14/175 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ ++GIGG R +L A+ V + + + A + Y +NFG P +G+I +
Sbjct: 10 KGYKFIDLFAGIGGFRLAL--ESFGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQVDE 66
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ H L + PCQP++ G Q D+R F + ++ K P ++F+ENV
Sbjct: 67 TRIP---DHDILCAGFPCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENV 121
Query: 130 VGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
F T D K I ++ N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 122 KNFATHDG-GKTISVVKNTMLELGYSFQFSVLNPINYGIPQKRERVYMVCFRNDI 175
>gi|312872570|ref|ZP_07732638.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2062A-h1]
gi|311091932|gb|EFQ50308.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2062A-h1]
Length = 336
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 14/175 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ ++GIGG R +L A+ V + + + A + Y +NFG P +G+I +
Sbjct: 10 KGYKFIDLFAGIGGFRLAL--ESFGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQVDE 66
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ H L + PCQP++ G Q D+R F + ++ K P ++F+ENV
Sbjct: 67 TSIP---DHDILCAGFPCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENV 121
Query: 130 VGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
F T D K I ++ N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 122 KNFATHDG-GKTISVVKNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDI 175
>gi|309809622|ref|ZP_07703479.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners SPIN
2503V10-D]
gi|308170103|gb|EFO72139.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners SPIN
2503V10-D]
Length = 336
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 14/175 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ ++GIGG R +L A+ V + + + A + Y +NFG P +G+I +
Sbjct: 10 KGYKFIDLFAGIGGFRLAL--ESFGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQVDE 66
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ H L + PCQP++ G Q D+R F + ++ K P ++F+ENV
Sbjct: 67 TRIP---DHDILCAGFPCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENV 121
Query: 130 VGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
F T D K I ++ N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 122 KNFATHDG-GKTISVVKNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDI 175
>gi|329920363|ref|ZP_08277095.1| modification methylase HhaI [Lactobacillus iners SPIN 1401G]
gi|328936039|gb|EGG32492.1| modification methylase HhaI [Lactobacillus iners SPIN 1401G]
Length = 336
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 14/172 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ ++GIGG R +L A+ V + + + A + Y +NFG P +G+I +
Sbjct: 10 KGYKFIDLFAGIGGFRLAL--ESFGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQVDE 66
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ H L + PCQP++ G Q D+R F + ++ K P ++F+ENV
Sbjct: 67 TSIP---DHDILCAGFPCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENV 121
Query: 130 VGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
F T D K I ++ N+ Y Q +L+P+ +G+P R R + + R
Sbjct: 122 KNFATHDG-GKTISVVKNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFR 172
>gi|428671680|gb|EKX72598.1| hypothetical protein BEWA_050660 [Babesia equi]
Length = 526
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 126/326 (38%), Gaps = 90/326 (27%)
Query: 101 DARAFSFLKILELIPHT--VKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILS 158
D R L+I LI T K P +F+EN+ F S + I L Y F LS
Sbjct: 238 DGRRAPILRITRLILSTDPEKLPLYIFLENIKEFYHSVDYRIFIAALRIRGYKVLSFKLS 297
Query: 159 PLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWD 218
LQFG P R R + AK + LR PL +IT + P+ ++
Sbjct: 298 TLQFGFPNERTRLYITAKLDGFP--------EYLRHYGPL------DLIT--ELPNSFYE 341
Query: 219 KLLESCDPVER--FLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFL 276
+ + + + LEF N E D SI F
Sbjct: 342 RYGVRKEALVKAPILEFLNE----------------------------ENDAHDSI--FN 371
Query: 277 VPLSLIE-RWGSAMDIVYPD-----SKRCCCFTKSYYRYVKGTGSLLATVQPK------- 323
+P S++ R + DIVY D CFTK+Y R++ GTGS+ P
Sbjct: 372 IPESILACRKSLSFDIVYKDPTYKGRSYTMCFTKNYGRFINGTGSVWCFGGPDPESYKDD 431
Query: 324 NKGKASSLKEQHLRYFTPREVANLHSFPGDFQ---------------------------F 356
N+ + ++ +RYF+P+EVA L F D Q F
Sbjct: 432 NRLENLAVYSNSIRYFSPKEVARLMGFRVDEQKFAFVPFLTSLDCACTNGDKDGYTSLKF 491
Query: 357 PHHLSLRQRYALLGNSLSIAVVAPLL 382
P +LS +Q Y LLGNSL+ VVA L
Sbjct: 492 PRNLSNKQLYGLLGNSLNPQVVATLF 517
>gi|428211804|ref|YP_007084948.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
gi|428000185|gb|AFY81028.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
Length = 390
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 162/388 (41%), Gaps = 52/388 (13%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-GNIQNLTAAE 72
+ +E ++GIGG + A++ Q + A D ++ A VY NFG +Q G+I + E
Sbjct: 8 KAVELFAGIGGFHLGMAAANI--QTIWANDNSELAAQVYRSNFGEASFQFGDITEIDITE 65
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVV 130
+ +H L + PCQP++ G ++ D R F +I+E++ K P F+ENV
Sbjct: 66 IP---SHDILTAGFPCQPFSSAGKKQGIRDCLRGTLFERIIEILDK--KQPPYFFLENVK 120
Query: 131 GFETSDT--HAKMI-EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR--KPLSFRCQ 185
T ++ H ++I + L+ DY + +++ L FG+P +R R F R P S+
Sbjct: 121 RMLTMESGYHFRVILDALSALDYFIEWRVINTLSFGLPQNRDRIFIFGTRINSPQSYL-- 178
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
+LL + S LL D+ I Q ++ + S + N G +
Sbjct: 179 ----ELLENHSVLLTQADVEAIQVDSQLQSNFTPISSSHS------KLPNWG--IAYHRK 226
Query: 246 FLSTGTAAVDDFGAAEETVEV--DRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFT 303
+ A+ D ++ ++ D F +ER + + R C
Sbjct: 227 MYAKPIPALPDIQLRKKLRDILQDESEVESQFDFTPDTLERIKQSKAV-----NRYCNGV 281
Query: 304 KSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYF------------TPREVANLHSFP 351
+ Y +G G+ L G S+L R++ TP E A L FP
Sbjct: 282 EILYN--QGGGARLGYTIFGINGITSTLTASTSRHYERYRVGDKYRRLTPVEYARLMGFP 339
Query: 352 GDFQFPHHLSLRQRYALLGNSLSIAVVA 379
D + + RYAL GN+++ VA
Sbjct: 340 DD--WCRVARIYDRYALFGNAIAPPSVA 365
>gi|225019628|ref|ZP_03708820.1| hypothetical protein CLOSTMETH_03581 [Clostridium methylpentosum
DSM 5476]
gi|224947595|gb|EEG28804.1| hypothetical protein CLOSTMETH_03581 [Clostridium methylpentosum
DSM 5476]
Length = 390
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 9/188 (4%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL--TAA 71
++++ ++G GG+ S+ D +V AF+ D A D YE NF H Y+ ++ ++ +
Sbjct: 3 KIVDLFAGCGGL--SMGFQDAGFNIVGAFEFWDIAADCYEKNFEHPVYRMDLSDVEKSVE 60
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
++ + + PPCQ ++ G + ++ A S I ++P + + +ENV
Sbjct: 61 KIKLLKPEIIIGGPPCQDFSHAGKRIEAGRA---SLTGAYAQIISEIRPRYFV-MENVDR 116
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK-RKPLSFRCQLLNNQ 190
+ S+T+A I + Y E IL GVP R R+FC+ + F + NNQ
Sbjct: 117 AQKSNTYASARNIFVKAGYGLTEIILDASHCGVPQKRKRFFCIGSLGQKDGFLLEYFNNQ 176
Query: 191 LLRSPSPL 198
+ + + L
Sbjct: 177 VSKHETTL 184
>gi|328947436|ref|YP_004364773.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
gi|328447760|gb|AEB13476.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
Length = 439
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 18/180 (10%)
Query: 5 MCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY--- 61
C ++ ++ ++ ++GIGG R ++ Q V + + +D A Y N+G P+
Sbjct: 88 FCASESLSFTFIDLFAGIGGFRLAMQSC--GGQCVFSSEWDDAAKQTYFENYGEVPFGDI 145
Query: 62 -QGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVK 119
+ I++L + D+ A PCQP++ G +K D R F +I E++ V
Sbjct: 146 TKTEIKDLIPKKFDVLCA-----GFPCQPFSYSGQKKGFEDKTRGTLFFEICEIL--KVH 198
Query: 120 PPHMLFVENVVGF---ETSDTHAKMIEILANS-DYLTQEFILSPLQFGVPYSRPRYFCLA 175
P +F+ENV G + +T A + IL + Y E ILS L F +P R R++C+
Sbjct: 199 RPKFIFLENVKGLISHKNGETIATIRTILKDELGYDIHEVILSSLDFELPQKRERWYCVG 258
>gi|418028740|ref|ZP_12667292.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354691423|gb|EHE91351.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 334
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60
ME+ K++G V +SGIGG+ M + +V A D A DVY+ N R
Sbjct: 1 MERTSEKSNG--LTVASLFSGIGGLDLGFMYS--GYNLVWANDFEKNAVDVYKENVDERI 56
Query: 61 YQGNIQNL--TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTV 118
G+I + E D+ + PCQP++ G QK D R F I +I
Sbjct: 57 VLGDITEIYEQVPETDV-----LIGGFPCQPFSMMGKQKGFDDERGTLFFTIQRIIELHE 111
Query: 119 KPPHMLFVENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
+ P +L +ENV T D T KM IL + Y+ +L+ +G+P +R R F +A
Sbjct: 112 QQPKILVLENVKNLLTHDHGRTFKKMKSILEDLGYIVHAKVLNTSDYGLPQNRRRVFVVA 171
>gi|334121160|ref|ZP_08495234.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
gi|333455446|gb|EGK84095.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
Length = 343
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 11/173 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ +SGIGG R K + + V + +IN K + Y+ NFG P+ +I N+ A+L
Sbjct: 2 KFIDLFSGIGGFRQGFEK--IGFECVFSCEINSKCREAYQKNFGEVPF-ADISNINPADL 58
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---V 130
+ + PCQP++ G + D R F +I ++I +K P ++ +ENV +
Sbjct: 59 ADF--DILVAGFPCQPFSICGKKLGFEDTRGTLFFEICKII--KIKQPKVIVLENVKHLI 114
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR-KPLSF 182
+ +T +I L + Y +L+ FG+P R R F +A + +P +F
Sbjct: 115 HHDKGNTLKVIIASLEDLGYRVNYQMLNAKDFGIPQHRERIFIIATQGQPFNF 167
>gi|440682814|ref|YP_007157609.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
gi|428679933|gb|AFZ58699.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
Length = 390
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ +E ++GIGG R L A++ + + A DIN + VYE NFG + ++
Sbjct: 6 FKAVELFAGIGGFRLGLTNANI--ETIWANDINQLSCQVYESNFGKDSIV--LGDINKIP 61
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVV 130
+ H L + PCQP++ G + D+ R F +I+E+I K P +ENV
Sbjct: 62 ISCIPNHDILTAGFPCQPFSPAGKKLGVRDSVRGSLFERIVEIINE--KQPKHFLLENVK 119
Query: 131 GFETSDT--HAKMI-EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 187
T + H ++I L+ DY + I+SP+ FG+P +R R F + F +
Sbjct: 120 RLLTMENGYHFRVILNALSELDYFIEWRIISPISFGIPQNRDRIFIFGTK----FNSTDI 175
Query: 188 NNQLLRSPSPLLGNDDM-------TVITKHDQPDDS 216
+++L S L D+ +I K+ P D+
Sbjct: 176 TSEVLEKTSIFLTQPDLIDLENIEILIEKNMMPIDA 211
>gi|380694454|ref|ZP_09859313.1| DNA-cytosine methyltransferase [Bacteroides faecis MAJ27]
Length = 343
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 161/389 (41%), Gaps = 72/389 (18%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ + GIGG R ++ + V + V + D + A YE NF P G+I+
Sbjct: 3 KKYKGIDLFCGIGGFRLAMNSSQV--ECVFSSDNDKFAQQTYEANFHEVP-TGDIK--AV 57
Query: 71 AELDMYGAHAWLLSPPCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
E D+ PCQP++ +QG + F +ILE KPP M+F+
Sbjct: 58 DEKDIPKFDILTAGFPCQPFSYAGEKQGFNDEVRGTLFFDVCRILEY----HKPP-MVFL 112
Query: 127 ENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
ENV G ++ D T +++ L Y ILS L +G+P R R++C+A R + F
Sbjct: 113 ENVKGLKSHDKGKTLQTVLDTLKKLGYYPHWTILSSLDYGLPQKRERWYCVAFRTDVDFE 172
Query: 184 C--QLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVN 241
+ + +LR + + I+K + D D + P +R ++ NS + N
Sbjct: 173 WPKPIKGHPVLRDIIEMNDRNPSLAISKFEL--DRIDYHFANAKPGDR-IQHDNSKYKPN 229
Query: 242 TETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVP--LSLIERWGSAMDIVYPDSKRC 299
T+ G V F + ++ H P + E + S +D
Sbjct: 230 TK-----KGKYGVFSFQKTDGSLRF-------HVGDPAKTQIQEAFYSCLDTY------- 270
Query: 300 CCFTKSYYRYVKGTGSLLATVQPK---NKGKASSLKEQHLRYFTPREVANLHSFPGDFQF 356
+++A PK + K S L+ + ++ FP DF F
Sbjct: 271 -------------ASTIIANRTPKLWDIRRKLSVLESKRIQ-----------GFPDDFVF 306
Query: 357 PHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
P +S Q Y LGNS+S+ ++ ++ +
Sbjct: 307 P--VSDAQAYKQLGNSVSVPIIVKIMNNM 333
>gi|269122857|ref|YP_003305434.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
gi|268314183|gb|ACZ00557.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
Length = 329
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 14/177 (7%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
+ ++ ++G+GG R SL A+ V + + + A VY++NFG P +G+I T
Sbjct: 11 GLKFIDLFAGLGGFRLSL--ESFGAECVYSNEWDKNAQKVYQMNFGDMP-EGDI---TLI 64
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ + H L + PCQ ++ G QK D R F + +I K P ++F+ENV
Sbjct: 65 DENNIPDHDILCAGFPCQAFSISGKQKGFEDNRGTLFFDVARII--KAKNPKVVFMENVK 122
Query: 131 GFETSDTHAKMIEILANSDY-LTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
F + D + ++I+ N+ L +F IL+ L FG+P R R + + RK L+ +
Sbjct: 123 NFASHD-NGNTLKIVQNTMIDLGYDFYYDILNSLDFGIPQKRERIYMVCFRKDLNIK 178
>gi|78777762|ref|YP_394077.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM
1251]
gi|78498302|gb|ABB44842.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM
1251]
Length = 328
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 9/176 (5%)
Query: 4 DMCKNDGEAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQ 62
+M N E++R ++ ++GIGG+R +A + V A +I+ A + Y NFG P+
Sbjct: 11 NMDINKEESFRAIDLFAGIGGIRLGFEQAFGEKIEFVFASEIDKYARETYYANFGETPH- 69
Query: 63 GNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH 122
G+I + + + L PCQ ++ G +K D R F ++ + + P
Sbjct: 70 GDITQIDEKNIPPF--DILLAGFPCQAFSVAGHRKGFEDTRGTLFFDVMRIAAY--HKPK 125
Query: 123 MLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
++F+ENV VG + T ++E L Y + IL+ +GVP +R R + +
Sbjct: 126 VIFLENVKGLVGHDKGKTFKVILETLKELGYYVEYQILNAKDYGVPQNRERIYIVG 181
>gi|448260666|ref|YP_007348760.1| cytosine-specific methyltransferase [Klebsiella phage KP27]
gi|370343475|gb|AEX26604.1| cytosine-specific methyltransferase [Klebsiella phage KP27]
Length = 303
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 7/172 (4%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
++++ +G+GG+R KA + + +I+ A Y N+G QG+I E
Sbjct: 2 KIIDLCAGVGGVRLGFDKAFGGVECLLTSEIDKHAQQTYADNWGDENIQGDI--FAIDEN 59
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
D+ L PCQ +++ GL++ D R +IL +I K P +LF ENV
Sbjct: 60 DVPDHDILLAGFPCQAFSKAGLKQGMLDPRGTIIFEILRII--RAKKPSVLFFENVPQLL 117
Query: 134 TSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
T D T + +L + Y +++ FG+P R R F + R P+ F
Sbjct: 118 THDKGNTFKTIYRLLQDEGYDIHYQVMNTKDFGLPQRRERVFIVCFRDPVFF 169
>gi|323650700|gb|ADX97434.1| M2.BspACI [Psychrobacillus psychrodurans]
Length = 444
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 11/174 (6%)
Query: 7 KNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ 66
+ND +++ +SGIGG L +++VS ++V + +I+ A YE NF + G+I
Sbjct: 80 ENDVGKLKIVSLFSGIGGFEAGLEESNVSGKIVFSSEIDRFAKISYEANFPNHNLHGDIT 139
Query: 67 NLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
+ A ++ H L+ PCQ ++ G ++ D R F + +I K P L
Sbjct: 140 KIDAKDV---PNHDLLIGGFPCQAFSIAGSREGFEDIRGTLFFDVARIIRE--KKPEFLL 194
Query: 126 VENVVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLA 175
+ENV + D ++K I ++ N+ Y I++ + GVP SR R + +A
Sbjct: 195 LENVKNLVSHD-NSKTIRVILNTLNELGYTVDFTIINSSEAGVPQSRDRTYIVA 247
>gi|257060181|ref|YP_003138069.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|256590347|gb|ACV01234.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 336
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 19/179 (10%)
Query: 17 EFYSGIGGMRYSL-------MKADVSAQVVEAF--DINDKANDVYELNFGHRPYQGNIQN 67
+ + GIGG R +L + D + + F DI+ A YELNFG +P+ G+I
Sbjct: 20 DLFCGIGGFRVALDIVCSTSKRWDKKIKPICVFSSDIDPDAQKNYELNFGEKPF-GDITK 78
Query: 68 LTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
+ A + H L + PCQP++ G + D R F I ++ K P+ +
Sbjct: 79 IEAQSIP---NHNLLFAGFPCQPFSICGKLQGFEDTRGTVFFDIARILKE--KKPYAFIL 133
Query: 127 ENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
ENV G + T +++IL + Y +L+ L F +P+ R R F + R PL F
Sbjct: 134 ENVKQLKGHQQGKTLKIILDILEDLGYYCDYKVLNALDFALPHKRERIFIVGFRDPLQF 192
>gi|14573297|gb|AAK68035.1| DNA methyltransferase 2c [Homo sapiens]
Length = 115
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 69/159 (43%), Gaps = 49/159 (30%)
Query: 28 SLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSPP 86
+L ++ + AQVV A D+N AN+VY+ NF H + I+ +T E D L+SPP
Sbjct: 1 ALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPP 60
Query: 87 CQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILA 146
CQP+TR L I+ +
Sbjct: 61 CQPFTRDLL----------------------------------------------IQTIE 74
Query: 147 NSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFR 183
N + QEF+LSP G+P SR RYF +AK +PL F+
Sbjct: 75 NCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQ 113
>gi|359403347|ref|ZP_09196253.1| cytosine-specific DNA modification methyltransferase [Spiroplasma
melliferum KC3]
gi|438120350|ref|ZP_20871945.1| DNA-methyltransferase [Spiroplasma melliferum IPMB4A]
gi|358832410|gb|EHK51684.1| cytosine-specific DNA modification methyltransferase [Spiroplasma
melliferum KC3]
gi|434155144|gb|ELL44119.1| DNA-methyltransferase [Spiroplasma melliferum IPMB4A]
Length = 404
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 91/179 (50%), Gaps = 17/179 (9%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL-- 68
E + ++ ++GIGG +L K +++++ A DI+ +VY NF ++ G+I+ +
Sbjct: 2 EKIKFVDLFAGIGGFHLALNKIS-NSELIFACDIDQYCREVYLNNFNNKIL-GDIKEIDE 59
Query: 69 -TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
T + D+ A PCQP+++ G QK +D R F +I+ ++ K P L +E
Sbjct: 60 NTIPDFDLLCA-----GFPCQPFSKGGFQKGFNDTRGALFFEIVRIL--QAKKPIFLLLE 112
Query: 128 NV---VGFETSDTHAKMIEILANSDYL--TQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
NV V + +T+ + E L Y+ ++ +L+P G+P R R + RK LS
Sbjct: 113 NVSNLVSHDNGNTYRVITEELTRLGYIFPSKPLVLTPTDIGIPMHRKRIYIPGIRKDLS 171
>gi|323650698|gb|ADX97433.1| M1.BspACI [Psychrobacillus psychrodurans]
Length = 320
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ +SGIGG R +L + Q V + DI+ A + Y+ NFG P G+I + + E
Sbjct: 4 FKFIDLFSGIGGFRIAL--EENGGQCVFSSDIDKYARETYKENFGEEP-SGDITKIKSEE 60
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H L + PCQP++ G + D R F + +I K P +ENV G
Sbjct: 61 IP---DHDILCAGFPCQPFSIAGKRLGFEDTRGTLFFDVARIIKD--KRPKAFLLENVAG 115
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
+ D T ++ L+ Y + +++ +GVP +R R++C+
Sbjct: 116 ITSHDGGKTLDTILNTLSELGYEREWKLMNAKYYGVPQNRNRWYCVG 162
>gi|52788777|gb|AAU87368.1| MnlI m5C-methyltransferase [Moraxella nonliquefaciens]
Length = 351
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 18/180 (10%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
+L+ + G GG+ Y +A +A V D N+KA D Y+ N H+ Q +LT+ EL
Sbjct: 3 ILDLFCGAGGLSYGFEQAGFNA--VLGVDFNEKALDTYQKN--HKNSQILCGDLTSCELK 58
Query: 75 --------MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
A L PPCQ ++ +G + +D+R F F + LE++ P + +
Sbjct: 59 DEIVKIAKTNNVRAVLGGPPCQGFSLKGKKLGMNDSRNFLFQEYLEIVRQV--NPDFIVM 116
Query: 127 ENVVGFETSDTHAKMIEILA---NSDYLTQEFILSPLQFGVPYSRPRYFCLA-KRKPLSF 182
ENV + +IL + Y +L+ +GVP SR R F +A K +P F
Sbjct: 117 ENVKALTNKTNEYFLTQILTGLKSMGYFVNYQVLNAKDYGVPQSRERIFIIATKNQPFDF 176
>gi|150026305|ref|YP_001297131.1| Type II modification methyltransferase HpaII [Flavobacterium
psychrophilum JIP02/86]
gi|149772846|emb|CAL44330.1| Type II modification methyltransferase HpaII [Flavobacterium
psychrophilum JIP02/86]
Length = 425
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 150/380 (39%), Gaps = 81/380 (21%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY----QGNIQN 67
+++ ++ ++GIGG R ++ ++ + V + + +A Y N+G P+ + I++
Sbjct: 94 SFKFVDLFAGIGGFRMAMQ--NLGGKCVFTSEWDKEAQKTYRANYGEVPFGDITKQQIKD 151
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+E D+ A PCQ ++ G + D R F + E+I P +F+E
Sbjct: 152 YIPSEFDLLCA-----GFPCQAFSIAGKRGGFDDTRGTLFFDVAEIIKK--HKPKAIFLE 204
Query: 128 NVVGFETSD---THAKMIEILAN--SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
NV G + D T ++ +L N Y+ + +++ FGVP +R R + + R
Sbjct: 205 NVKGLRSHDKGKTLETILNVLRNDLGYYVPEPQVVNAKNFGVPQNRERIYIVGFR----- 259
Query: 183 RCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNT 242
Q LN P PL N + + P K S V+ + ++ +
Sbjct: 260 --QDLNISSFEYPEPLENNPTFESVKEKLVPP---TKYYLSTQYVQTLI--NHKARHASK 312
Query: 243 ETGFLSTGTAAVDDFGAAEETV----EVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKR 298
GF G A + D G A V +R + +DH R
Sbjct: 313 GNGF---GYAIIPDNGIANAIVVGGMGRERNLVLDH-----------------------R 346
Query: 299 CCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPH 358
+T + ++KGT + + +R TPRE A L FP D+ P
Sbjct: 347 ITDYTPT--THIKGT-----------------VNREGIRKMTPREWARLQGFPDDYIIP- 386
Query: 359 HLSLRQRYALLGNSLSIAVV 378
++ Y GNS+++ +
Sbjct: 387 -VADASAYKQFGNSVAVPAI 405
>gi|221044562|dbj|BAH13958.1| unnamed protein product [Homo sapiens]
Length = 254
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 13/96 (13%)
Query: 272 IDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT---VQPKNKGKA 328
++ +L+P + R+ +DIV P +R CFTK Y Y++GTGS+L T VQ +N K+
Sbjct: 140 VNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENIYKS 199
Query: 329 ---SSLKEQ-------HLRYFTPREVANLHSFPGDF 354
S +EQ LRYFTP+E+ANL FP +F
Sbjct: 200 LTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEF 235
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH 58
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF H
Sbjct: 2 EPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH 49
>gi|23428398|gb|AAL15430.1| DNA methyltransferase A [Moraxella nonliquefaciens]
Length = 351
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 18/180 (10%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
+L+ + G GG+ Y +A +A V D N+KA D Y+ N H+ Q +LT+ EL
Sbjct: 3 ILDLFCGAGGLSYGFEQAGFNA--VLGVDFNEKALDTYQKN--HKNSQILCGDLTSCELK 58
Query: 75 --------MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
A L PPCQ ++ +G + +D+R F F + LE++ P + +
Sbjct: 59 DEIVKIAKTNNVRAVLGGPPCQGFSLKGKKLGMNDSRNFLFQEYLEIVRQV--NPDFIVM 116
Query: 127 ENVVGFETSDTHAKMIEILA---NSDYLTQEFILSPLQFGVPYSRPRYFCLA-KRKPLSF 182
ENV + +IL + Y +L+ +GVP SR R F +A K +P F
Sbjct: 117 ENVKALTNKTNEYFLTQILTGLKSMGYFVNYQVLNAKDYGVPQSRERIFIIATKNQPFDF 176
>gi|227485931|ref|ZP_03916247.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC
51172]
gi|227235976|gb|EEI85991.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC
51172]
Length = 318
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 12/170 (7%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ + GIGG R + ++ + V + DI+ A + Y NFG P G+I + A
Sbjct: 2 YKFIDLFCGIGGFRIAF--ENLGCKCVFSSDIDVYARETYNDNFGEYP-AGDIIKVDAET 58
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H L + PCQP++ G + DAR F ++ ++ K P +ENV G
Sbjct: 59 IP---NHDILCAGFPCQPFSIAGKRMGFEDARGTLFFEVARIL--KAKRPKAFILENVAG 113
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
+ D T +I IL DY +L+ +G+P +R R++C+ K
Sbjct: 114 LVSHDNGNTLGTIINILNELDYKVVWKLLNAKNYGIPQNRNRWYCVGVDK 163
>gi|431797343|ref|YP_007224247.1| DNA-methyltransferase Dcm [Echinicola vietnamensis DSM 17526]
gi|430788108|gb|AGA78237.1| DNA-methyltransferase Dcm [Echinicola vietnamensis DSM 17526]
Length = 452
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++GIGG +L ++ + V A ++ + D+YE+NFG RP +++T +
Sbjct: 10 KYIDLFAGIGGFHIAL--ENLGFECVFASELKESLADLYEINFGIRPN----RDITKIAV 63
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVG 131
+ H L + PCQP+++ G QK D R S F KI+E++ + P +ENV
Sbjct: 64 EDIPVHDILCAGFPCQPFSKAGSQKGLEDERNGSLFDKIVEILDY--HKPKYFILENVRN 121
Query: 132 FET---SDTHAKMIEILANS-DYLTQEFILSPLQFGVPYSRPRYFCLA 175
E +T A + L N +Y + + SP FG+P R R+F +
Sbjct: 122 LENHKKGETWAYIQNRLENELNYSIDKHVFSPHHFGIPQHRERFFIVG 169
>gi|416241717|ref|ZP_11632930.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC7]
gi|326571776|gb|EGE21785.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC7]
Length = 458
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 155/402 (38%), Gaps = 95/402 (23%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ ++GIGG+R + FD A Y+LN P+ G+I + A
Sbjct: 120 FKFIDLFAGIGGIRLGAERNGGLCVFSSEFD--KFAQQTYQLNHHEMPF-GDITQIDANN 176
Query: 73 LDMYGAHAWLLSP-PCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
L +H LL+ PCQP++ +G + ++ F L+ILE K P +E
Sbjct: 177 LP---SHDLLLAGFPCQPFSYSGKTEGFEDKTRGTLFFDVLRILE-----NKQPKFALLE 228
Query: 128 NVVGFETSDTHAKM---IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 184
NV GF++ D M ++ L + Y T IL+ +GVP R R++C+A RK
Sbjct: 229 NVKGFKSHDKGKTMDIALKALDEAGYNTYWTILNSYDYGVPQFRERWYCVAIRKD----- 283
Query: 185 QLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTET 244
+N P N D T + D+ DK L + +F
Sbjct: 284 --SDNGRFEFPK----NRDRTTKLRDIIESDNNDKSL----ILSKF-------------- 319
Query: 245 GFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTK 304
E+DR I++ + ER + P +K+
Sbjct: 320 --------------------EIDR---INYHFANCHINERVEHDNSMYAPYTKKG---KH 353
Query: 305 SYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVAN------------------ 346
+ Y+K G+L V K + L ++P +AN
Sbjct: 354 GVFSYLKADGALRFHVGDFAKTQIQEAFYASLDTYSPTIIANRVPKLWDIQRKLSVREAL 413
Query: 347 -LHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
L F DF+F +S Q Y LGNS+++ V+ +L LFA
Sbjct: 414 RLQGFNDDFKFD--VSNAQAYKQLGNSVTVPVIQAILASLFA 453
>gi|67595546|ref|XP_666006.1| DNA methyltransferase PMT1 - like protein [Cryptosporidium hominis
TU502]
gi|54656899|gb|EAL35775.1| DNA methyltransferase PMT1 - like protein [Cryptosporidium hominis]
Length = 205
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%)
Query: 119 KPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
K P FVENV FETS+TH +MI++L+ ++ T EF+LSP GVP +R RY+C++ RK
Sbjct: 9 KLPKAWFVENVANFETSNTHKEMIKMLSKLNFCTFEFMLSPTLIGVPNTRVRYYCVSVRK 68
>gi|186686332|ref|YP_001869528.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
gi|186468784|gb|ACC84585.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
Length = 331
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 9/176 (5%)
Query: 3 KDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ 62
KD KN + RV++ ++G GG+ SL + +V AFD A DVY+ NF H +
Sbjct: 6 KDYTKNS--SLRVVDLFAGCGGL--SLGFQNAGFNIVAAFDNWKPAIDVYQKNFSHEIFD 61
Query: 63 GNIQNLTAAE--LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP 120
++ NL + PPCQ ++ G ++ + R + E++ +
Sbjct: 62 YDLNNLRKNYQIFREICPEIIIGGPPCQDFSSAG-KRDENLGRGDLSIVFSEIVTSVL-- 118
Query: 121 PHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
P +ENV F S+ + ++ +I N+ Y E IL GVP R R+FC +
Sbjct: 119 PQWFLIENVDLFRKSNKYKEVKQIFKNTGYGLSEIILDASLCGVPQKRKRFFCFGE 174
>gi|218439646|ref|YP_002377975.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
gi|218172374|gb|ACK71107.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
Length = 320
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 12/189 (6%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNF 56
ME C ++ + + ++ + GIGG R ++ + + + V + DI+ A VY NF
Sbjct: 1 MELLECGDEKKVIKYVDLFCGIGGFRLAVNQVSEGYNFKSICVFSSDIDGDAQTVYRENF 60
Query: 57 GHRPYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPH 116
G P +G+I + A + + H L PCQP++ G K D R F I ++
Sbjct: 61 GDLP-EGDITKIPAEMIPHH--HLLLAGFPCQPFSICGDLKGFEDTRGTLFFDIARILES 117
Query: 117 TVKPPHMLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFC 173
K P+ +ENV + + T +I+ L Y IL+ L FG+P R R F
Sbjct: 118 --KKPYTFVLENVKQLLVHQQGQTLNVIIKSLQKLGYYVNHKILNALDFGLPQKRERIFI 175
Query: 174 LAKRKPLSF 182
+ P+ F
Sbjct: 176 VGCLDPIPF 184
>gi|127420|sp|P19888.1|MTBA_BACAR RecName: Full=Modification methylase BanI; Short=M.BanI; AltName:
Full=Cytosine-specific methyltransferase BanI
gi|216242|dbj|BAA00613.1| BanI modification methylase [Aneurinibacillus aneurinilyticus]
Length = 428
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
+ ++ ++GIGG+R +A ++ + V + +I+ KA + Y LNF P QG+I +T
Sbjct: 4 KFVDLFAGIGGIRIGFERAAKRFELETECVLSSEIDKKACETYALNFKEEP-QGDIHEIT 62
Query: 70 A-AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
+ E D L PCQP++ G Q+ D R F ++ ++ P +EN
Sbjct: 63 SFPEFDF-----LLAGFPCQPFSYAGKQQGFGDTRGTLFFEVERVLRDN--RPKAFLLEN 115
Query: 129 VVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
V G T D T +I L Y +L+ FGVP +R R + L
Sbjct: 116 VRGLVTHDKGRTLKTIISKLEELGYGVSYLLLNSSTFGVPQNRVRIYILG 165
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 315 SLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLS 374
S+ T+ + K ++ R TPRE A L FP DF H + Y LGNS++
Sbjct: 342 SISITLTSSDAHKLGVVQNNVPRRITPRECARLQGFPDDFIL--HSNDNFAYKQLGNSVT 399
Query: 375 IAVVAPLLQYLF 386
+ VV +++ LF
Sbjct: 400 VKVVEKVIEDLF 411
>gi|428770450|ref|YP_007162240.1| DNA-cytosine methyltransferase [Cyanobacterium aponinum PCC 10605]
gi|428684729|gb|AFZ54196.1| DNA-cytosine methyltransferase [Cyanobacterium aponinum PCC 10605]
Length = 350
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 10/194 (5%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
++ ++ ++GIGG R KA + DI+ A ++Y NF +P G+I+ +
Sbjct: 2 TYKFIDLFAGIGGFRLGFEKAGFNCVFSSEIDIH--AREMYLANFQEKP-DGDIRKINHK 58
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ + L PCQP++ G +K +D R F +I ++I + P ++ +ENV
Sbjct: 59 NIPNFDV--LLAGFPCQPFSIAGEKKGFNDIRGTLFFEIAKIIEY--HQPKVIVLENVKH 114
Query: 132 FETSDTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 188
F+ D +I + L N Y T +L+ FGVP +R R + + + F L
Sbjct: 115 FKNHDNGKTLITVLNTLNNLGYTTSWTLLNAKDFGVPQNRERTIIIGCLEQIQFDFDKLE 174
Query: 189 NQLLRSPSPLLGND 202
+ + +L N+
Sbjct: 175 TKPQKKLKDILENE 188
>gi|422301674|ref|ZP_16389039.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9806]
gi|389789264|emb|CCI14672.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9806]
Length = 347
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 13/176 (7%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
W ++ ++G+GG R +L ++ Q V + +I+ + VY N+GH P +I+ L A
Sbjct: 2 WTFIDLFAGVGGFRIAL--ENLGCQCVFSSEIDPHSQKVYLANYGHLPDNQDIRKLEAKT 59
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H L PCQ ++ G + DAR F ++ ++ K P +ENV G
Sbjct: 60 VP---DHDILCGGFPCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQG 114
Query: 132 FETSD---THAKMIEILANS--DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
D T +++ILA ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 115 LVHHDRGKTLKTILDILAKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|427718054|ref|YP_007066048.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
gi|427350490|gb|AFY33214.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
Length = 432
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 16/173 (9%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ 66
+ R ++ +SGIGG+R + +A ++++ V + +IN A VY+ NFGH+P G+++
Sbjct: 2 QKIRFVDLFSGIGGIRLAFEQAADSLNIASTCVLSSEINTDAQLVYQENFGHKPL-GDVR 60
Query: 67 NLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
+D H LL+ PCQ ++ G + D R F +I L+ + KP +F
Sbjct: 61 -----LIDSLPEHEILLAGFPCQSFSHAGKKAGFGDIRGTLFFEIARLL-DSYKPKAFIF 114
Query: 126 VENVVGFETSDTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
ENV G + D + I + Y F+L+ FG+P +R R + +
Sbjct: 115 -ENVRGLYSHDEGKTLATIQHEIQKRGYSFHAFLLNSANFGLPQNRVRIYLVG 166
>gi|255279955|ref|ZP_05344510.1| modification methylase EcoRII [Bryantella formatexigens DSM 14469]
gi|255269728|gb|EET62933.1| DNA (cytosine-5-)-methyltransferase [Marvinbryantia formatexigens
DSM 14469]
Length = 311
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V+ +SGIGG+ + D V+ A D + A Y+ NFG G+I + E+
Sbjct: 2 KVVSLFSGIGGLDRGFL--DTGYDVIWANDFDKYAVQTYKANFGEHIVLGDINEIPLDEI 59
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK---PPHMLFVENVV 130
+ PCQP++ G QK D R F +I E+I +K P + +ENV
Sbjct: 60 P--DCDVLIGGFPCQPFSMMGQQKGFEDTRGTLFFRIAEIIADKIKKGRKPAAIVLENVR 117
Query: 131 GFETSDTHAKMIEILAN-SDYLTQEF---ILSPLQFGVPYSRPRYF--CLAKRK 178
+T D EI D L E IL+ FGVP +R R + C + +K
Sbjct: 118 TLKTHDKGNTFREIRRILQDELGYEVFCDILNSADFGVPQTRNRTYLVCFSNQK 171
>gi|425472619|ref|ZP_18851460.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9701]
gi|389881279|emb|CCI38157.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9701]
Length = 347
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 19/179 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
W ++ ++GIGG R +L ++ Q V + +I+ + VY N+GH P +I+ L E
Sbjct: 2 WTFIDLFAGIGGFRIAL--ENLGCQCVFSSEIDPHSQKVYLANYGHLPDNQDIRKL---E 56
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H L PCQ ++ G + DAR F ++ ++ K P +ENV G
Sbjct: 57 VKTVPDHDILCGGFPCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQG 114
Query: 132 FETSDTHAKMIEILANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 182
D + IL D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 115 LVHHDRGKTLKTIL---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIIGFREDLNI 170
>gi|399116811|emb|CCG19620.1| modification methylase HhaI [Taylorella asinigenitalis 14/45]
Length = 324
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ + ++ +SGIGG R +L + A+ + + D + A + Y +NF P+ ++T
Sbjct: 10 KGFTFIDLFSGIGGFRVALQ--SLGAKCLFSSDWDRYAKETYWINFKELPHD----DITK 63
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+L H L + PCQ ++ G + D+R F ++ ++ K P ++F+ENV
Sbjct: 64 IDLKFIPEHDILCAGFPCQAFSISGKRLGFEDSRGTLFFDVIRIVKD--KKPKVVFLENV 121
Query: 130 VGFETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLS 181
F T D + + N L +F +L+P FG+P +RPR + +A R+ +
Sbjct: 122 SYFGTHDQGRTLRVVHYNFYKLGYKFYSKVLNPCDFGIPQNRPRLYMIALREDIK 176
>gi|428318060|ref|YP_007115942.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
gi|428241740|gb|AFZ07526.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
Length = 345
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ +SGIGG R K + V + +IN K VY NFG P+ G+I + EL
Sbjct: 2 KFIDLFSGIGGFRQGFEKN--GFKCVFSCEINSKCRQVYTDNFGEVPF-GDISKINPVEL 58
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---V 130
+ + + PCQP++ G + D R F I ++I +K P ++ +ENV +
Sbjct: 59 EDF--DVLVAGFPCQPFSICGKKLGFEDTRGTLFFDICKII--KIKQPKVIVLENVKHLI 114
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
+ +T +I L + Y +L+ FG+P R R F +A
Sbjct: 115 HHDKGNTLKVIIASLEDLGYSVNYKMLNAKDFGIPQHRERIFIIA 159
>gi|228469904|ref|ZP_04054843.1| cytosine-specific methyltransferase NlaX [Porphyromonas uenonis
60-3]
gi|228308539|gb|EEK17327.1| cytosine-specific methyltransferase NlaX [Porphyromonas uenonis
60-3]
Length = 395
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 18/179 (10%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELN--------FGHRPYQGNIQN 67
++ ++GIGG + L V AQ V A + + A YE N F + G+I
Sbjct: 37 IDLFAGIGG--FHLAMHSVGAQCVFASEWDQYARQTYEANYRKLAPELFSRGLFAGDITK 94
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK---PPHML 124
+ A + + PCQP++ GL++ D R F I ++ ++ PP +L
Sbjct: 95 VDPASIPPF--DILCAGFPCQPFSVAGLRRGFEDTRGTLFFNIANIVKSKIEEGNPPKVL 152
Query: 125 FVENVVGFETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPL 180
F+ENV G T D + IL + L + +L+ FGVP +R R F +A K L
Sbjct: 153 FLENVRGLRTHDKGNTLRVILNTLEELGYRYSYEVLNAKYFGVPQNRERLFIVAWSKDL 211
>gi|428780232|ref|YP_007172018.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428694511|gb|AFZ50661.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 324
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 14/187 (7%)
Query: 5 MCKNDGEAWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRP 60
M N ++ R ++ + GIGG R + ++ V + D + A Y+ NF P
Sbjct: 1 MLFNQIQSLRYVDLFCGIGGFRIATETVCKNYNLKPVCVFSSDWDLDAQKTYQANFNDSP 60
Query: 61 YQGNIQNLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
QG+ LT ++ H LL+ PCQP++ G D R +F I ++ +
Sbjct: 61 -QGD---LTKIPVEAIPKHDLLLAGFPCQPFSICGKLNGFEDIRGTAFFDIARILDY--H 114
Query: 120 PPHMLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
P L +ENV VG + T ++E+L N Y + +L+ L FG+P R R F +
Sbjct: 115 QPEALVLENVKQLVGHQKGKTLQIILEVLRNLGYYVEYKVLNALDFGLPQKRERVFIVGC 174
Query: 177 RKPLSFR 183
R+ + F+
Sbjct: 175 RQSVRFQ 181
>gi|355575377|ref|ZP_09044915.1| hypothetical protein HMPREF1008_00892 [Olsenella sp. oral taxon 809
str. F0356]
gi|354817687|gb|EHF02186.1| hypothetical protein HMPREF1008_00892 [Olsenella sp. oral taxon 809
str. F0356]
Length = 295
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 82/165 (49%), Gaps = 9/165 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ--NLTAA 71
RV++ ++G GGM Y +A VV AFD D A +YE NF H Y+ ++ ++T
Sbjct: 2 RVVDLFAGCGGMSYGFEQA--GFDVVAAFDNWDAAIRIYEANFDHPIYKRDLSTDDITPM 59
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
++ + PPCQ Y+ G K+ RA +K EL+ +KP ++F ENV
Sbjct: 60 VREL-KPDVIVGGPPCQDYSIAG--KRQIGERANLTVKYAELVID-IKPTWVVF-ENVYN 114
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
E T KM + L ++ Y +L + GVP R R+F + K
Sbjct: 115 IERFPTLPKMEQKLRDAGYGITTHVLDASRCGVPQKRRRFFLIGK 159
>gi|440756964|ref|ZP_20936164.1| modification methylase HpaII [Microcystis aeruginosa TAIHU98]
gi|440172993|gb|ELP52477.1| modification methylase HpaII [Microcystis aeruginosa TAIHU98]
Length = 347
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 19/179 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
W ++ ++GIGG R +L ++ Q V + +I+ + VY N+GH P +I+ L E
Sbjct: 2 WTFIDLFAGIGGFRIAL--ENLGCQCVFSSEIDPHSQKVYLANYGHLPDNQDIRKL---E 56
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H L PCQ ++ G + DAR F ++ ++ K P +ENV G
Sbjct: 57 VKTVPDHDILCGGFPCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQG 114
Query: 132 FETSDTHAKMIEILANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 182
D + IL D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 115 LVHHDRGKTLKTIL---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|425440571|ref|ZP_18820869.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9717]
gi|389718951|emb|CCH97155.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9717]
Length = 347
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 19/179 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
W ++ ++GIGG R +L ++ Q V + +I+ + VY N+GH P +I+ L A
Sbjct: 2 WTFIDLFAGIGGFRIAL--ENLGCQCVFSSEIDPHSQKVYLANYGHLPDNQDIRKLEAKT 59
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H L PCQ ++ G + DAR F ++ ++ K P +ENV G
Sbjct: 60 VP---DHDILCGGFPCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQG 114
Query: 132 FETSDTHAKMIEILANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 182
D + IL D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 115 LVHHDRGKTLKTIL---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|390438785|ref|ZP_10227224.1| Modification methylase HpaII [Microcystis sp. T1-4]
gi|389837791|emb|CCI31348.1| Modification methylase HpaII [Microcystis sp. T1-4]
Length = 347
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 19/179 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
W ++ ++GIGG R +L ++ Q V + +I+ + VY N+GH P +I+ L E
Sbjct: 2 WTFIDLFAGIGGFRIAL--ENLGCQCVFSSEIDPHSQKVYLANYGHLPDNQDIRKL---E 56
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H L PCQ ++ G + DAR F ++ ++ K P +ENV G
Sbjct: 57 VKTVPDHDILCGGFPCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQG 114
Query: 132 FETSDTHAKMIEILANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 182
D + IL D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 115 LVHHDRGKTLKTIL---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|425451275|ref|ZP_18831097.1| Modification methylase HpaII [Microcystis aeruginosa PCC 7941]
gi|389767477|emb|CCI07114.1| Modification methylase HpaII [Microcystis aeruginosa PCC 7941]
Length = 342
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 19/179 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
W ++ ++GIGG R +L ++ Q V + +I+ + VY N+GH P +I+ L E
Sbjct: 2 WTFIDLFAGIGGFRIAL--ENLGCQCVFSSEIDPHSQKVYLANYGHLPDNQDIRKL---E 56
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H L PCQ ++ G + DAR F ++ ++ K P +ENV G
Sbjct: 57 VKTVPDHDILCGGFPCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQG 114
Query: 132 FETSDTHAKMIEILANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 182
D + IL D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 115 LVHHDRGKTLKTIL---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|425447575|ref|ZP_18827560.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9443]
gi|389731828|emb|CCI04164.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9443]
Length = 347
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
W ++ ++GIGG R +L ++ Q V + +I+ + VY N+GH P +I+ L E
Sbjct: 2 WTFIDLFAGIGGFRIAL--ENLGCQCVFSSEIDPHSQKVYLANYGHLPDNQDIRKL---E 56
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H L PCQ ++ G + DAR F ++ ++ K P +ENV G
Sbjct: 57 VKTVPDHDILCGGFPCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQG 114
Query: 132 FETSDTHAKMIEILANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLS 181
D + IL D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 115 LVHHDGGKTLKTIL---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLN 169
>gi|443662730|ref|ZP_21133000.1| modification methylase HpaII [Microcystis aeruginosa DIANCHI905]
gi|159027151|emb|CAO86782.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443332022|gb|ELS46652.1| modification methylase HpaII [Microcystis aeruginosa DIANCHI905]
Length = 347
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 19/179 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
W ++ ++GIGG R +L ++ Q V + +I+ + VY N+GH P +I+ L A
Sbjct: 2 WTFIDLFAGIGGFRIAL--ENLGCQCVFSSEIDPHSQKVYLANYGHLPDNQDIRKLEAKT 59
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H L PCQ ++ G + DAR F ++ ++ K P +ENV G
Sbjct: 60 VP---DHDILCGGFPCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQG 114
Query: 132 FETSDTHAKMIEILANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 182
D + IL D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 115 LVHHDRGKTLKTIL---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|420414314|ref|ZP_14913434.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|420419419|ref|ZP_14918509.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393026648|gb|EJB27745.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393031325|gb|EJB32397.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 317
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V +SGIGG+ ++ S ++V A D + A + Y+ N G G+I+ E
Sbjct: 2 KVASLFSGIGGLDLGFIQN--SFEIVWANDFDKYAVETYKANIGQNIVLGDIE----VEK 55
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV--- 129
D H L+ PCQP++ G + D R F I E+I P ++ +ENV
Sbjct: 56 DHICGHDILIGGFPCQPFSTLGSLQGFEDKRGTLFFTICEIIKKY--RPKIVVLENVKNL 113
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
+ ++ +++ L DY IL+ L FG+P R R F +A RK
Sbjct: 114 INHNKGESFKRILFELNELDYQVNYDILNTLDFGIPQQRNRVFIVALRK 162
>gi|425462557|ref|ZP_18842030.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9808]
gi|389824352|emb|CCI26716.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9808]
Length = 347
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 19/179 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
W ++ ++GIGG R +L ++ Q V + +I+ + VY N+GH P +I+ L E
Sbjct: 2 WTFIDLFAGIGGFRTAL--ENLGCQCVFSSEIDPHSQKVYLANYGHLPDNQDIRKL---E 56
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H L PCQ ++ G + DAR F ++ ++ K P +ENV G
Sbjct: 57 VKTVPDHDILCGGFPCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQG 114
Query: 132 FETSDTHAKMIEILANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 182
D + IL D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 115 LVHHDRGKTLKTIL---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|445418183|ref|ZP_21434814.1| putative DNA (cytosine-5-)-methyltransferase [Acinetobacter sp.
WC-743]
gi|444760872|gb|ELW85301.1| putative DNA (cytosine-5-)-methyltransferase [Acinetobacter sp.
WC-743]
Length = 293
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG--HRPYQGNIQNLTAA 71
R ++ ++GIGG +L A+ A+ V A +IN+ A Y N G+I T
Sbjct: 14 RFIDLFAGIGGFHLAL--ANQGAKCVFASEINENAVKTYLENHALEKEKMHGDI---TLI 68
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ + H L + PCQP+++ G +K D R F IL+++ K P F+ENV
Sbjct: 69 DPNNIPDHEVLCAGFPCQPFSQAGHKKGFEDVRGTLFFNILKIL--EAKQPKAYFLENVR 126
Query: 131 GFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
G D T + + E L N Y Q F++ +G+P RPR F +
Sbjct: 127 GLLKHDDGRTFSIIKEKLENLGYTFQSFVVKSSDYGLPQHRPRLFMIG 174
>gi|336321961|ref|YP_004601929.1| DNA-cytosine methyltransferase [[Cellvibrio] gilvus ATCC 13127]
gi|336105542|gb|AEI13361.1| DNA-cytosine methyltransferase [[Cellvibrio] gilvus ATCC 13127]
Length = 456
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 161/434 (37%), Gaps = 76/434 (17%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
A+R ++ ++GIGG +L + V + +I+ A VYELN+GH P Q+ T +
Sbjct: 6 AFRFVDLFAGIGGFAAALTA--FGGKGVYSVEIDRAAAKVYELNWGHSPLGDITQDATDS 63
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+++ PCQP+++ G Q+ + R + IL ++ P ++ +ENV
Sbjct: 64 VMNVPAHDVLAAGFPCQPFSKSGAQRGMDETRGTLYWNILNIV--QAHHPSVVLLENVRN 121
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEF--ILSPLQF-----GVPYSRPRYFCLAKRKPLS 181
G ++E L + Y E + SP Q G P R R F A P
Sbjct: 122 LAGPRHRHEWQVIVETLRDEGYRLSETPAVFSPHQIPPEHGGRPQVRERVFITATYDPDG 181
Query: 182 FRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPD------------------DSWD---KL 220
+ ++ + + G D T + D D D+WD +L
Sbjct: 182 IGSAIAAEPVVSPRTRVGGFDPSTEWSLDDFLDEDHHVRGCDLSVAEKLWIDAWDDFVQL 241
Query: 221 LESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSID------- 273
+ R F D T + + AEET R +
Sbjct: 242 MWEQREGRRLPGFPLWADAWPTTAAKAAELAELI----RAEETASWKRDFLVKNAAFYDA 297
Query: 274 HFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYR------YVKGTG----------SLL 317
H V E+WG D P ++ + R +++ +G +L+
Sbjct: 298 HRRVIDQWAEKWGVFTDAFPPSRRKLEWQAQDTPRLWDTVMHLRPSGIRAKRPTYLPALV 357
Query: 318 ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQF---PHHLSLRQRYALLGNSLS 374
A Q +S+ R +PRE A L P +F F P + RQ LGN ++
Sbjct: 358 AITQ-------TSIIGPRERRLSPREAARLQGLPDEFTFGTQPASATYRQ----LGNGVN 406
Query: 375 IAVVAPLLQYLFAQ 388
+ V +L+ A+
Sbjct: 407 VGAVWNVLKAHVAR 420
>gi|347533695|ref|YP_004841703.1| hypothetical protein LSA_1p00140 [Lactobacillus sanfranciscensis
TMW 1.1304]
gi|345505091|gb|AEN99771.1| hypothetical protein LSA_1p00140 [Lactobacillus sanfranciscensis
TMW 1.1304]
Length = 438
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 162/401 (40%), Gaps = 85/401 (21%)
Query: 7 KNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NI 65
K + +SG GG+ Y L+K+ + ++ A DI A + Y N G P +I
Sbjct: 80 KRTSTGLNTISLFSGAGGLDYGLIKSGFN--IIFANDILKAAVENYRYNIG--PIDDRDI 135
Query: 66 QNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
+ +EL A + PCQP++ G + + D R +L+++ +I K P ++
Sbjct: 136 TKINTSELP--AADVVVGGFPCQPFSNAGNRLGTDDDRGNLYLELIRII--NAKNPKVVL 191
Query: 126 VENVVGFET--SDTHAKMIEIL------ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
+ENV G + + +K+I+ + A S Y +L +GVP +R R + R
Sbjct: 192 MENVRGLLSIKNKDGSKLIDTIVYLLEHAASGYTVTYKLLRASDYGVPQNRYRVMIVGIR 251
Query: 178 KPLSFRCQLLNNQLLRSPSPL-LGNDDMTVITKHDQP------DDSWDKLLESCDPVERF 230
K L F+ + P P+ + D+TV + P D+ WD +S + V
Sbjct: 252 KDLGFKFEF--------PKPIKVDPKDLTVEHAINIPEGTPNQDEVWDLSPQSQEIVNNI 303
Query: 231 LEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMD 290
E G + + V D+ L ER +
Sbjct: 304 PE-------------------------GKSWKAVPYDK------------LPER----LK 322
Query: 291 IVYPDSKRCCCFTKSYYRYVKG--TGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLH 348
+ + KR Y R+ + G++ A P++ G + R ++ RE+A +
Sbjct: 323 KIRNNMKRYHS-PNMYRRFARNEINGTITAAATPEHSGIVHPTEN---RRYSVREIARIQ 378
Query: 349 SFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQA 389
SFP D+ F S+ +Y ++GN+ V P L ++ A
Sbjct: 379 SFPDDYVFVGD-SVSSKYKVIGNA-----VPPKLAHVVGDA 413
>gi|59802299|ref|YP_209011.1| NgoIM [Neisseria gonorrhoeae FA 1090]
gi|59719194|gb|AAW90599.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae FA 1090]
Length = 315
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ +SGIGG+R K + +D A VYE NFG +P+ G+I + ++
Sbjct: 2 YKTIDLFSGIGGIRLGFEKYGCTNVFSSEWD--KYARQVYEANFGEKPF-GDINGIDPSD 58
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H LL+ PCQP++ G D R F I E++ K P +ENV
Sbjct: 59 IP---DHDILLAGFPCQPFSIAGKGLGFEDTRGTLFFNIAEIL--KTKQPKAFLLENVKR 113
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 188
T D T ++E L Y +L+ L FG+P R R + + + F
Sbjct: 114 LTTHDSGRTFRIILETLKQLGYTVYFKVLNTLDFGLPQKRERIYIVGFSDNIPFYFPEPI 173
Query: 189 NQLLRSPSPLLGND 202
NQ R LL ND
Sbjct: 174 NQ-YRPLGELLEND 186
>gi|268597921|ref|ZP_06132088.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae FA19]
gi|268551709|gb|EEZ46728.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae FA19]
Length = 320
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ +SGIGG+R K + +D A VYE NFG +P+ G+I + ++
Sbjct: 7 YKTIDLFSGIGGIRLGFEKYGCTNVFSSEWD--KYARQVYEANFGEKPF-GDINGIDPSD 63
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H LL+ PCQP++ G D R F I E++ K P +ENV
Sbjct: 64 IP---DHDILLAGFPCQPFSIAGKGLGFEDTRGTLFFNIAEIL--KTKQPKAFLLENVKR 118
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
T D T ++E L Y +L+ L FG+P R R + +
Sbjct: 119 LTTHDSGRTFRIILETLKQLGYTVYFKVLNTLDFGLPQKRERIYIVG 165
>gi|166368121|ref|YP_001660394.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa
NIES-843]
gi|166090494|dbj|BAG05202.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa
NIES-843]
Length = 347
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 19/179 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
W ++ ++G+GG R +L ++ Q V + +I+ + VY N+GH P +I+ L A
Sbjct: 2 WTFIDLFAGVGGFRIAL--ENLGCQCVFSSEIDPHSQKVYLANYGHLPDNQDIRKLEAKT 59
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H L PCQ ++ G + DAR F ++ ++ K P +ENV G
Sbjct: 60 VP---DHDILCGGFPCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQG 114
Query: 132 FETSDTHAKMIEILANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 182
D + IL D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 115 LVHHDRGKTLKTIL---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|404379848|ref|ZP_10984897.1| DNA (cytosine-5-)-methyltransferase [Simonsiella muelleri ATCC
29453]
gi|404294517|gb|EFG32046.2| DNA (cytosine-5-)-methyltransferase [Simonsiella muelleri ATCC
29453]
Length = 339
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 11/169 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+ ++ ++G+GG+R +A + V + +I+ A Y N+ PY G+I + A E
Sbjct: 26 KAIDLFAGVGGIRTGFQQAFGERIEFVFSSEIDKFARQTYAANYHEIPY-GDITQIQAHE 84
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H +L+ PCQ ++ GL+K +D R F + + + P +LF+ENV G
Sbjct: 85 VP---THDIILAGFPCQAFSVAGLRKGFADTRGTLFFDVARIAEY--HKPKILFLENVKG 139
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
F+ D T A + L Y +L+ FGVP +R R + +A R
Sbjct: 140 FKNHDKGNTFATVKLTLEQLGYRVYADVLNAKNFGVPQNRERIYIVAIR 188
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 337 RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
R TPRE + L FP DF P +S Q Y GNS+++ V+ L Q ++
Sbjct: 283 RKLTPREASLLQGFPSDFVIP--VSDVQAYKQFGNSVAVPVIKALAQEIY 330
>gi|188588765|ref|YP_001921868.1| DNA-cytosine methyltransferase [Clostridium botulinum E3 str.
Alaska E43]
gi|188499046|gb|ACD52182.1| DNA-cytosine methyltransferase [Clostridium botulinum E3 str.
Alaska E43]
Length = 304
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V++ + G GG +SL + ++V A+D + A VY+ NF H Y ++QN++ E+
Sbjct: 2 KVIDLFCGCGG--FSLGMQNAGFEIVAAYDNWEPAIKVYDENFNHPIYNIDLQNISLEEI 59
Query: 74 D---MYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVE 127
+ + PPCQ Y+ G ++ + RA SF KI+ I P +E
Sbjct: 60 ESMKKLNPDVIIGGPPCQDYSSAG-KRDENGGRADLTISFAKIINQI-----RPQYFIME 113
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
NV + T +I S Y E +L + VP +R RYF + + K
Sbjct: 114 NVNDIKKYTTLKNAKQIFEKSGYGLTEVVLDASLYEVPQARKRYFLVGELK 164
>gi|308185227|ref|YP_003929360.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SJM180]
gi|308061147|gb|ADO03043.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SJM180]
Length = 317
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 8/167 (4%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
++ +SGIGG+ ++ ++V A D + A + Y+ N G G+I+ E
Sbjct: 2 KIASLFSGIGGLDLGFIQN--GFEIVWANDFDKHAVETYKANIGQNIILGDIE----IEK 55
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIP-HTVKPPHMLFVENVVG 131
D H L+ PCQP++ G + D R F I E+I H K + V+N++
Sbjct: 56 DHICGHDILIGGFPCQPFSTLGSLQGFEDKRGTLFFTICEIIKKHRPKIVVLENVKNLIN 115
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
++ +++ L DY IL+ L FG+P R R F +A RK
Sbjct: 116 HNKGESFKRILFELNELDYQVNYDILNTLDFGIPQQRNRVFIVALRK 162
>gi|425437022|ref|ZP_18817451.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9432]
gi|389678124|emb|CCH93007.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9432]
Length = 347
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 19/179 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
W ++ ++G+GG R +L ++ Q V + +I+ + VY N+GH P +I+ L A
Sbjct: 2 WTFIDLFAGVGGFRIAL--ENLGCQCVFSSEIDPHSQKVYLANYGHLPDNQDIRKLEAKT 59
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H L PCQ ++ G + DAR F ++ ++ K P +ENV G
Sbjct: 60 VP---DHDILCGGFPCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQG 114
Query: 132 FETSDTHAKMIEILANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 182
D + IL D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 115 LVHHDRGKTLKTIL---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|268595734|ref|ZP_06129901.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae 35/02]
gi|291044897|ref|ZP_06570606.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|293397972|ref|ZP_06642178.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|268549123|gb|EEZ44541.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae 35/02]
gi|291011791|gb|EFE03787.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|291611918|gb|EFF40987.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
Length = 320
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ +SGIGG+R K + +D A VYE NFG +P+ G+I + ++
Sbjct: 7 YKTIDLFSGIGGIRLGFEKYGCTNVFSSEWD--KYARQVYEANFGEKPF-GDINGIDPSD 63
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H LL+ PCQP++ G D R F I E++ K P +ENV
Sbjct: 64 IP---DHDILLAGFPCQPFSIAGKGLGFEDTRGTLFFNIAEIL--KTKQPKAFLLENVKR 118
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
T D T ++E L Y +L+ L FG+P R R + +
Sbjct: 119 LTTHDSGRTFRIVLETLKQLGYTVYFKVLNTLDFGLPQKRERIYIVG 165
>gi|194099739|ref|YP_002002874.1| NgoIM [Neisseria gonorrhoeae NCCP11945]
gi|240013125|ref|ZP_04720038.1| NgoIM [Neisseria gonorrhoeae DGI18]
gi|240015568|ref|ZP_04722108.1| NgoIM [Neisseria gonorrhoeae FA6140]
gi|240120196|ref|ZP_04733158.1| NgoIM [Neisseria gonorrhoeae PID24-1]
gi|254492718|ref|ZP_05105889.1| modification methylase NgoBI [Neisseria gonorrhoeae 1291]
gi|268600171|ref|ZP_06134338.1| modification methylase NgoBI [Neisseria gonorrhoeae MS11]
gi|268600304|ref|ZP_06134471.1| modification methylase NgoBI [Neisseria gonorrhoeae PID18]
gi|268602536|ref|ZP_06136703.1| modification methylase NgoBI [Neisseria gonorrhoeae PID1]
gi|268681085|ref|ZP_06147947.1| modification methylase NgoBI [Neisseria gonorrhoeae PID332]
gi|268685237|ref|ZP_06152099.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-92-679]
gi|268685565|ref|ZP_06152427.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-93-1035]
gi|385336683|ref|YP_005890630.1| NgoIM [Neisseria gonorrhoeae TCDC-NG08107]
gi|193935029|gb|ACF30853.1| NgoIM [Neisseria gonorrhoeae NCCP11945]
gi|226511758|gb|EEH61103.1| modification methylase NgoBI [Neisseria gonorrhoeae 1291]
gi|268584302|gb|EEZ48978.1| modification methylase NgoBI [Neisseria gonorrhoeae MS11]
gi|268584435|gb|EEZ49111.1| modification methylase NgoBI [Neisseria gonorrhoeae PID18]
gi|268586667|gb|EEZ51343.1| modification methylase NgoBI [Neisseria gonorrhoeae PID1]
gi|268621369|gb|EEZ53769.1| modification methylase NgoBI [Neisseria gonorrhoeae PID332]
gi|268625521|gb|EEZ57921.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-92-679]
gi|268625849|gb|EEZ58249.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-93-1035]
gi|317165226|gb|ADV08767.1| NgoIM [Neisseria gonorrhoeae TCDC-NG08107]
Length = 315
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ +SGIGG+R K + +D A VYE NFG +P+ G+I + ++
Sbjct: 2 YKTIDLFSGIGGIRLGFEKYGCTNVFSSEWD--KYARQVYEANFGEKPF-GDINGIDPSD 58
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H LL+ PCQP++ G D R F I E++ K P +ENV
Sbjct: 59 IP---DHDILLAGFPCQPFSIAGKGLGFEDTRGTLFFNIAEIL--KTKQPKAFLLENVKR 113
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 188
T D T ++E L Y +L+ L FG+P R R + + + F
Sbjct: 114 LTTHDSGRTFRIVLETLKQLGYTVYFKVLNTLDFGLPQKRERIYIVGFSDNIPFYFPEPI 173
Query: 189 NQLLRSPSPLLGND 202
NQ R LL ND
Sbjct: 174 NQ-YRPLGELLEND 186
>gi|365837695|ref|ZP_09379055.1| DNA (cytosine-5-)-methyltransferase [Hafnia alvei ATCC 51873]
gi|364561408|gb|EHM39312.1| DNA (cytosine-5-)-methyltransferase [Hafnia alvei ATCC 51873]
Length = 346
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG----NIQ-NL 68
+V +F+SG GG L A +V DI++++ + NF + N+ N+
Sbjct: 4 KVFDFFSGCGGTSAGLKAAGF--DIVFGLDIDNESAGTFTKNFSDAFFINDDIRNVDVNI 61
Query: 69 TAAELDMYGAHAWLL----SPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPP 121
+D Y A++ L+ PCQP++RQ QK++ D R + F + +E P
Sbjct: 62 IKDMVDTYKANSELVLFCGCAPCQPFSRQNNQKKTDDPRLNLLWEFGRFVETCQ-----P 116
Query: 122 HMLFVENVVGFETSDTHA----KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
+ VENV G + D + IE++ ++ Y + ++ + +GVP R R+ LA +
Sbjct: 117 DFVLVENVPGIQKLDVSSGPLLSFIELIKSNKYHSNHGVIPAIWYGVPQKRERFVLLASK 176
Query: 178 KPL 180
K +
Sbjct: 177 KSI 179
>gi|427713211|ref|YP_007061835.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 6312]
gi|427377340|gb|AFY61292.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 6312]
Length = 437
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
R ++ ++GIGGMR L +A + ++ V + +I+ KA + Y LNF P QG+I+ ++
Sbjct: 3 RFIDLFAGIGGMRLGLEQACQQLGLESKCVLSSEIDRKAKETYALNFNEVP-QGDIRQVS 61
Query: 70 AA-ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
+ D L PCQP++ G QK D R F +I ++ P +EN
Sbjct: 62 EIPKFDF-----MLAGFPCQPFSHAGKQKGFGDTRGTLFFEIERILEQC--QPKGFLLEN 114
Query: 129 VVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
V G T D T ++ L Y T +L+ F + +R R + +
Sbjct: 115 VRGLTTHDRGRTFQTILHSLEKLGYKTNYLLLNSSNFSLAQNRVRIYIIG 164
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 315 SLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPH--HLSLRQRYALLGNS 372
S+ T+ + + + + +R TPRE A L FP F H H + +Q LGN+
Sbjct: 345 SISITLTSSDASRIGVIHQDRIRRITPRECARLQGFPETFAIHHEDHAAYKQ----LGNA 400
Query: 373 LSIAVVAPLLQYLF 386
+S+ VV +++ LF
Sbjct: 401 VSVPVVKAIIKDLF 414
>gi|425442125|ref|ZP_18822382.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9717]
gi|389716960|emb|CCH98858.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9717]
Length = 347
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 19/179 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
W ++ ++GIGG R +L ++ Q V + +I+ + VY N+GH P +I+ L E
Sbjct: 2 WTFIDLFAGIGGFRIAL--ENLGCQCVFSSEIDPHSQKVYLANYGHLPDNQDIRKL---E 56
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H + PCQ ++ G + DAR F ++ ++ K P +ENV G
Sbjct: 57 VKTVPDHDIMCGGFPCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQG 114
Query: 132 FETSDTHAKMIEILANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 182
D + IL D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 115 LVHHDRGKTLKTIL---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|313667524|ref|YP_004047808.1| cytosine-specific methyltransferase [Neisseria lactamica 020-06]
gi|422111278|ref|ZP_16380944.1| DNA cytosine methyltransferase M.NlaX [Neisseria lactamica
Y92-1009]
gi|309378245|emb|CBX23130.1| DNA cytosine methyltransferase M.NlaX [Neisseria lactamica
Y92-1009]
gi|313004986|emb|CBN86414.1| cytosine-specific methyltransferase [Neisseria lactamica 020-06]
Length = 313
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+++++ ++GIGG+R +A + V + +I+ A Y+ N G G+I A+
Sbjct: 2 FKIIDLFAGIGGIRLGFEQAFDGVRCVFSSEIDKYAVQTYQANHGGETVCGDITQTDVAD 61
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H LL+ PCQP+++ GL+K +D R F I ++ K P +ENV
Sbjct: 62 IP---DHDILLAGFPCQPFSQAGLKKGFADTRGTLFFDIERIL--LAKKPQAFLLENVKQ 116
Query: 132 FETSDTHAKMIEILAN---SDYLTQEFILSPLQFGVPYSRPRYFCLA 175
+ D + ILA+ + Y +L FG+P +R R + +
Sbjct: 117 LKGHDKGRTLQVILAHLQQAGYKVYTEVLKARDFGIPQNRERIYLVG 163
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 337 RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
R TPRE A L FP FQ P +S Q Y GNS+ + V+ + + + A
Sbjct: 255 RKITPREAARLQGFPDSFQIP--VSDAQAYRQFGNSVCVPVIRAIAEQMKA 303
>gi|410643136|ref|ZP_11353638.1| DNA (cytosine-5-)-methyltransferase [Glaciecola chathamensis S18K6]
gi|410137314|dbj|GAC11825.1| DNA (cytosine-5-)-methyltransferase [Glaciecola chathamensis S18K6]
Length = 356
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 157/395 (39%), Gaps = 58/395 (14%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNL 68
++ ++ +SG+GG+ Y KA ++ A + N YE NF H N N+
Sbjct: 3 SFETVDLFSGVGGLSYGFEKAGFISKY--AVEFNSSIAKGYEENFPHSKIINEDINTVNI 60
Query: 69 TAAELDMYGAHAWLLS-PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+ ++ G ++ PPCQ ++++G + +D R F FLK +E + V P +E
Sbjct: 61 KSVFGNLNGDKTIIIGGPPCQGFSQKGKRIGLNDERNFLFLKYIECV--EVINPIAFVIE 118
Query: 128 NVVGFETSDTH---AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 184
NV G T++ ++IE L Y E +L+ +GVP +R R F + R
Sbjct: 119 NVPGLLTNEGGFFLNEIIEKLQGLGYSLFERVLNASDYGVPQNRKRAFIVGLRT------ 172
Query: 185 QLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTET 244
N P T K +D+ L P+ + E S S
Sbjct: 173 ---ENATFTWP---------TEFGKKVTINDAISDL-----PILKSGEGSKS-------A 208
Query: 245 GFLSTGTAAVDDFGAAEETV--EVDRCVSIDH---FLVPLSLIERWGSAMDIVYPDSKRC 299
G+ TA V D+ +V VS H L L LI G D+ P+
Sbjct: 209 GYR---TAPVSDYQVKMRGTVSKVLNHVSTKHSPLVLERLKLIPEDGGRTDLP-PEHLTK 264
Query: 300 CCFTKSYYRY-VKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPH 358
F+ ++ R G + T +L Q R T RE A + SFP F+FP
Sbjct: 265 STFSGTWCRLPANGIARTITTRFDTPSSGMFTLPRQD-RCLTVREAARIQSFPDSFRFPG 323
Query: 359 HLSLRQRYALLGNS----LSIAVVAPLLQYLFAQA 389
S + +GN+ L+ AV L++ L A
Sbjct: 324 GKS--TQMLQVGNAVPPLLAEAVGKQLMKSLLKMA 356
>gi|12229862|sp|Q59603.2|MTB1_NEIGO RecName: Full=Modification methylase NgoBI; Short=M.NgoBI; AltName:
Full=Cytosine-specific methyltransferase NgoBI;
Short=M.NgoI
gi|5924404|gb|AAB03206.2| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae]
Length = 317
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ +SGIGG+R K + +D A VYE NFG +P+ G+I + ++
Sbjct: 2 YKTIDLFSGIGGIRLGFEKYGCTNVFSSEWD--KYARQVYEANFGEKPF-GDINGIDPSD 58
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H LL+ PCQP++ G D R F I E++ K P +ENV
Sbjct: 59 IP---DHDILLAGFPCQPFSIAGKGLGFEDTRGTLFFNIAEIL--KTKQPKAFLLENVKR 113
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 188
T D T ++E L Y +L+ L FG+P R R + + + F
Sbjct: 114 LTTHDSGRTFRIVLETLKQLGYTVYFKVLNTLDFGLPQKRERIYIVGFSDNIPFYFPEPI 173
Query: 189 NQLLRSPSPLLGND 202
NQ R LL ND
Sbjct: 174 NQ-YRPLGELLEND 186
>gi|365154735|ref|ZP_09351161.1| modification methylase ScrFIA [Campylobacter sp. 10_1_50]
gi|363648972|gb|EHL88107.1| modification methylase ScrFIA [Campylobacter sp. 10_1_50]
Length = 393
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQN 67
N+ +++++ ++GIGG R + VV + +I+ A Y+ NFG P+ G+I
Sbjct: 74 NENAPYKIIDLFAGIGGTRLGFYQTG-KTNVVFSSEIDKFAVKTYKANFGETPF-GDITK 131
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+ +E D+ + PCQ +++ G + D R F +I +I K P +E
Sbjct: 132 I--SEKDIPNHDIIVGGFPCQAFSQAGKKLGFEDTRGTLFFEIARIIKE--KRPKAFLLE 187
Query: 128 NVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
NV ++ D T+ + + L + +Y IL FGVP +R R + +
Sbjct: 188 NVKNLKSHDKGRTYKTIEKTLKDLNYDVHSIILKAKDFGVPQNRERIYIVG 238
>gi|262280408|ref|ZP_06058192.1| DNA cytosine methyltransferase [Acinetobacter calcoaceticus
RUH2202]
gi|262258186|gb|EEY76920.1| DNA cytosine methyltransferase [Acinetobacter calcoaceticus
RUH2202]
Length = 354
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 18/178 (10%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAE 72
+V++F+SG GG L +A + + D + KA++ YE NF + Y +I+ L E
Sbjct: 2 KVIDFFSGCGGASEGLRQAGLDIAI--GLDFDKKASETYEANFPEAKFYNVDIRELDEKE 59
Query: 73 L-----DMYGAHAWLL---SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
L D+ LL PCQP++ Q K D R + I P +
Sbjct: 60 LAAAFKDINQKEEPLLLVACAPCQPFSSQNKAKSEDDIRRTLLDETHRFINEL--QPDYI 117
Query: 125 FVENVVGFETSDT-----HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
F+ENV G + D + + I+ L +Y EFI ++GVP R R+ LA +
Sbjct: 118 FIENVPGLQNIDKDKEGPYKRFIQFLNMQNYKFIEFIAKSEEYGVPQRRKRFVLLASK 175
>gi|424782768|ref|ZP_18209614.1| DNA-cytosine methyltransferase [Campylobacter showae CSUNSWCD]
gi|421959589|gb|EKU11198.1| DNA-cytosine methyltransferase [Campylobacter showae CSUNSWCD]
Length = 393
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQN 67
N+ +++++ ++GIGG R + VV + +I+ A Y+ NFG P+ G+I
Sbjct: 74 NENAPYKIIDLFAGIGGTRLGFYQTG-KTNVVFSSEIDKFAVKTYKANFGETPF-GDITK 131
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+ +E D+ + PCQ +++ G + D R F +I +I K P +E
Sbjct: 132 I--SEKDIPNHDIIVGGFPCQAFSQAGKKLGFEDTRGTLFFEIARIIKE--KRPKAFLLE 187
Query: 128 NVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
NV ++ D T+ + + L + +Y IL FGVP +R R + +
Sbjct: 188 NVKNLKSHDKGRTYKTIEKTLKDLNYDVHSIILKAKDFGVPQNRERIYIVG 238
>gi|429742796|ref|ZP_19276407.1| DNA (cytosine-5-)-methyltransferase [Neisseria sp. oral taxon 020
str. F0370]
gi|429167658|gb|EKY09557.1| DNA (cytosine-5-)-methyltransferase [Neisseria sp. oral taxon 020
str. F0370]
Length = 357
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 10/166 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+R ++ ++GIGG+R +A Q V + +I+ A Y +G P+ G+I +T +E
Sbjct: 50 FRFIDLFAGIGGIRLPFEEA--GGQCVFSSEIDKFAKTTYHAFYGDVPH-GDITQITPSE 106
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
+ + L PCQP+++ GL+K +D R F I E+I K P +ENV G
Sbjct: 107 IPDF--DLLLAGFPCQPFSQAGLKKGFTDTRGTMFFHIEEIIRQ--KRPKAFLLENVKGL 162
Query: 133 ETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
+ D T + + L+ Y +++ F +P +R R + +
Sbjct: 163 KGHDKGRTFKTIYDSLSALGYTVSAKVMAAKDFNLPQNRERIYIVG 208
>gi|420417787|ref|ZP_14916882.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393030968|gb|EJB32041.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 317
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 8/167 (4%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
++ +SGIGG+ ++ ++V A D + A + Y+ N G G+I+ E
Sbjct: 2 KIASLFSGIGGLDLGFIQN--GFEIVWANDFDKHAVETYKANMGQNIILGDIE----IEK 55
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIP-HTVKPPHMLFVENVVG 131
D H L+ PCQP++ G + D R F I E+I H K + V+N++
Sbjct: 56 DHICGHDILIGGFPCQPFSTLGSLQGFEDKRGTLFFTICEIIKKHRPKIVVLENVKNLIN 115
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
++ +++ L DY IL+ L FG+P R R F +A RK
Sbjct: 116 HNKRESFKRILFELNELDYQVNYDILNTLDFGIPQQRNRVFIVALRK 162
>gi|420201801|ref|ZP_14707397.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
NIHLM018]
gi|394270279|gb|EJE14798.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
NIHLM018]
Length = 396
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 141/378 (37%), Gaps = 79/378 (20%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+++++ ++GIGG R + + + + + + + Y NFG P+ G+I + A +
Sbjct: 87 FKLVDLFAGIGGTRLGF-QLNGRINCIFSSEWDKFSAKTYRANFGDTPH-GDITKIDAKD 144
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H L++ PCQ ++ GL+K D R F I ++ K P +ENV
Sbjct: 145 IP---DHDILVAGFPCQAFSLAGLKKGFDDTRGTLFFDIARVLNE--KRPKAFLLENVKN 199
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 188
+ D T + +I L +Y +L FG P +R R + + K + + N
Sbjct: 200 LRSHDKGKTFSIIINTLNELNYEVHTAVLKSTDFGCPQNRERIYIVGFDKNI-----IKN 254
Query: 189 NQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLS 248
+ R P+P WDK L + + D+ T + L
Sbjct: 255 SADFRFPTPC-----------------KWDKTLSNI--------LQKNVDEKYTISDKLW 289
Query: 249 TGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYR 308
G A + G + SK + YY+
Sbjct: 290 LGHQRRKKEHAKKGN----------------------GFGYSLFNEKSKYTNTLSARYYK 327
Query: 309 YVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYAL 368
GS + QP Q+ R TPRE A L FP +F P +S Q Y
Sbjct: 328 ----DGSEILIEQP----------NQNPRKITPREAARLQGFPENFIIP--VSDTQAYKQ 371
Query: 369 LGNSLSIAVVAPLLQYLF 386
GNS+S+ V+ + + +
Sbjct: 372 FGNSVSVPVIKSIAKNIL 389
>gi|261400948|ref|ZP_05987073.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970]
gi|269209191|gb|EEZ75646.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970]
Length = 313
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+++++ ++GIGG+R +A + V + +I+ A Y+ N G G+I A+
Sbjct: 2 FKIIDLFAGIGGIRLGFEQAFDDVRCVFSSEIDKYAVQTYQANHGGETVCGDITQTDVAD 61
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H LL+ PCQP+++ GL+K +D R F I ++ K P +ENV
Sbjct: 62 IP---DHDILLAGFPCQPFSQAGLKKGFADTRGTLFFDIERIL--LAKKPQAFLLENVKQ 116
Query: 132 FETSDTHAKMIEILAN---SDYLTQEFILSPLQFGVPYSRPRYFCLA 175
+ D + ILA+ + Y +L FG+P +R R + +
Sbjct: 117 LKGHDKGRTLQVILAHLQQAGYKVYTEVLKARDFGIPQNRERIYLVG 163
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 337 RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
R TPRE A L FP FQ P +S Q Y GNS+ + V+ + + + A
Sbjct: 255 RKITPREAARLQGFPDSFQIP--VSDAQAYRQFGNSVCVPVIRAIAEQMKA 303
>gi|386748708|ref|YP_006221916.1| DNA (cytosine-5-)-methyltransferase [Helicobacter cetorum MIT
99-5656]
gi|384554950|gb|AFI06706.1| DNA (cytosine-5-)-methyltransferase [Helicobacter cetorum MIT
99-5656]
Length = 317
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V +SGIGG ++ ++V A D + A Y+ N G+I N E
Sbjct: 2 KVASLFSGIGGFDLGFIQN--GFEIVWANDFDKYAVKTYKANISQNIVLGDILN----EK 55
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV--- 129
D G H L+ PCQP++ G K D R F I E+I P M+ +ENV
Sbjct: 56 DNIGKHDILIGGFPCQPFSTLGALKGFDDKRGTLFFTICEIIEK--HKPKMVVLENVKNL 113
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
+ +T +++ L +Y IL+ L FG+P R R F +A +K
Sbjct: 114 INHNKGETFKRILFELDRLNYQVNYEILNTLDFGLPQQRNRVFIVALKK 162
>gi|428778955|ref|YP_007170741.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428693234|gb|AFZ49384.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 333
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH---RPYQGNI-- 65
+ + ++ ++GIGG Y L D+ Q V A +++ KA + YE NF + + G
Sbjct: 9 QPLKFIDLFAGIGGFHYGL--HDLGLQCVFASELDRKARETYEHNFKQISPQLFTGETQP 66
Query: 66 ---QNLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKP 120
Q++T + ++ H L PCQP++ G +K D R F ILE+I K
Sbjct: 67 LFNQDITQQDFNLIPDHDVLCGGFPCQPFSIAGYRKGLKDQGRGDLFFTILEIIRR--KK 124
Query: 121 PHMLFVENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLAK 176
P ++F+ENV + D T+ M +++ Y E +L+ + +G +P +R R + L
Sbjct: 125 PAVIFLENVKNLLSHDQGKTYNYMKTLISEEGYYVTEKVLNTMTYGNLPQNRERLYILGF 184
Query: 177 RKPLSF 182
+ +++
Sbjct: 185 KSKIAY 190
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 333 EQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
E+ +R TP E L FP +F FP LS +Y +GN++S++VV + Q + Q
Sbjct: 275 EKGIRKLTPLECLRLQGFPKEFTFPETLSRGNQYKQVGNAVSVSVVKSIAQQIKLQ 330
>gi|254804105|ref|YP_003082326.1| putative type II DNA modification methyltransferase [Neisseria
meningitidis alpha14]
gi|254667647|emb|CBA03458.1| putative type II DNA modification methyltransferase [Neisseria
meningitidis alpha14]
Length = 315
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ +SGIGG+R K + +D A +YE NFG +P+ G+I + ++
Sbjct: 2 YKTIDLFSGIGGIRLGFEKYGCTNVFSSEWD--KYARQMYEANFGEKPF-GDINGIDPSD 58
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H LL+ PCQP++ G D R F I E++ K P +ENV
Sbjct: 59 IP---DHDILLAGFPCQPFSIAGKGLGFEDTRGTLFFNIAEIL--KTKQPKAFLLENVKR 113
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 188
T D T ++E L Y +L+ L FG+P R R + + + F
Sbjct: 114 LTTHDSGRTFRIILETLKQLGYTVYFKVLNTLDFGLPQKRERIYIIGFSDNIPFYFPEPI 173
Query: 189 NQLLRSPSPLLGND 202
NQ R LL ND
Sbjct: 174 NQ-YRPLGELLEND 186
>gi|420489566|ref|ZP_14988158.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|420523507|ref|ZP_15021925.1| modification methylase HpaII [Helicobacter pylori Hp P-11b]
gi|393104987|gb|EJC05538.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|393125856|gb|EJC26308.1| modification methylase HpaII [Helicobacter pylori Hp P-11b]
Length = 317
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 8/167 (4%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V +SGIGG+ ++ +++ A D + A + Y+ N G G+I+ E
Sbjct: 2 KVASLFSGIGGLDLGFIQN--GFEIIWANDFDKHAVETYKANIGQNIVLGDIE----IEK 55
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIP-HTVKPPHMLFVENVVG 131
D H L+ PCQP++ G + D R F I E+I H K + V+N++
Sbjct: 56 DHIFEHDILIGGFPCQPFSTLGSLQGFEDKRGTLFFTICEIIKKHRPKIVVLENVKNLIN 115
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
++ +++ L DY IL+ L FG+P R R F +A RK
Sbjct: 116 HNKGESFKRILFELNELDYQVNYDILNTLDFGIPQQRNRVFIVALRK 162
>gi|425439307|ref|ZP_18819635.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9717]
gi|389720490|emb|CCH95818.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9717]
Length = 346
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 17 EFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMY 76
+FY+GIGG R L + + Q V + + N Y NF +++ L + L +
Sbjct: 22 DFYAGIGGFRLGLEQ--IGWQCVFSNENNPDCVKTYNHNFHESIKPQDVEALIPSLLPDF 79
Query: 77 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFE 133
+ PCQP++R G QK D+R + +IL + K P ++F+ENV V
Sbjct: 80 --EVFCGGFPCQPFSRAGQQKGWQDSRGLAIQEILRICHE--KKPKVIFLENVSNIVRLN 135
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
++ L +YL ++ F +P SRPR+F LA RK L +
Sbjct: 136 QGQILKDILIQLKEINYLAFYAVIDSKYFQIPQSRPRFFLLAFRKDLGIK 185
>gi|197302809|ref|ZP_03167861.1| hypothetical protein RUMLAC_01538 [Ruminococcus lactaris ATCC
29176]
gi|197298046|gb|EDY32594.1| modification methylase HhaI [Ruminococcus lactaris ATCC 29176]
Length = 333
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 14/176 (7%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
+ ++ ++G+GG R +L + A+ V + + N VY NFG P +G+I T
Sbjct: 11 GYSFIDLFAGLGGFRIAL--ESLGAKCVYSNEWNVPVQKVYADNFGDIP-EGDI---TQV 64
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ + H L + PCQ ++ G Q+ D+R F + ++ K P ++F+ENV
Sbjct: 65 DENTIPDHDILCAGFPCQAFSISGKQRGFEDSRGTLFFDVARIVK--AKKPKVVFMENVK 122
Query: 131 GFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
F T D H K +E++ + Y + +L+ + +G+P R R + + R L
Sbjct: 123 NFATHD-HGKTLEVVKRTMETLGYTFYQKVLNAVDYGIPQKRERIYMVCFRNDLGI 177
>gi|159025987|emb|CAO87894.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 329
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 17 EFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMY 76
+FY+GIGG R L + Q V + + N Y NF +++ L + L +
Sbjct: 5 DFYAGIGGFRLGL--EQIGWQCVFSNENNPDCVKTYNHNFHESIKPQDVEALIPSLLPDF 62
Query: 77 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 136
+ PCQP++R G QK D+R + +IL + K P ++F+ENV +
Sbjct: 63 --EVFCGGFPCQPFSRAGQQKGWQDSRGLAIQEILRICHE--KKPKVIFLENVSNIMRLN 118
Query: 137 THAKMIEILAN---SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
+ +IL +YL ++ F +P SRPR+F LA RK L +
Sbjct: 119 QGQILKDILIQLKEINYLAFYAVIDSKYFQIPQSRPRFFLLAFRKDLGIK 168
>gi|390440209|ref|ZP_10228555.1| Cytosine-specific methyltransferase [Microcystis sp. T1-4]
gi|389836353|emb|CCI32681.1| Cytosine-specific methyltransferase [Microcystis sp. T1-4]
Length = 346
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 17 EFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMY 76
+FY+GIGG R L + + Q V + + N Y NF +++ L + L +
Sbjct: 22 DFYAGIGGFRLGLEQ--IGWQCVFSNENNPDCVKTYNHNFHESIKPQDVEALIPSLLPDF 79
Query: 77 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFE 133
+ PCQP++R G QK D+R + +IL + K P ++F+ENV V
Sbjct: 80 --EVFCGGFPCQPFSRAGQQKGWQDSRGLAIQEILRICHE--KKPKVIFLENVSNIVRLN 135
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
++ L +YL ++ F +P SRPR+F LA RK L +
Sbjct: 136 QGQILKDILIQLKEINYLAFYAVIDSKYFQIPQSRPRFFLLAFRKDLGIK 185
>gi|296313699|ref|ZP_06863640.1| modification methylase NgoBI [Neisseria polysaccharea ATCC 43768]
gi|296839717|gb|EFH23655.1| modification methylase NgoBI [Neisseria polysaccharea ATCC 43768]
Length = 315
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ +SGIGG+R K + +D A +YE NFG +P+ G+I + ++
Sbjct: 2 YKTIDLFSGIGGIRLGFEKYGCTNVFSSEWD--KYARQMYEANFGEKPF-GDINGIDPSD 58
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H LL+ PCQP++ G D R F I E++ K P +ENV
Sbjct: 59 IP---DHDILLAGFPCQPFSIAGKGLGFEDTRGTLFFNIAEIL--KTKQPKAFLLENVKR 113
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
T D T ++E L Y +L+ L FG+P R R + +
Sbjct: 114 LTTHDSGRTFRIILETLKQLGYTVYFKVLNTLDFGLPQKRERIYIVG 160
>gi|432343044|ref|ZP_19592255.1| DNA-cytosine methyltransferase [Rhodococcus wratislaviensis IFP
2016]
gi|430771931|gb|ELB87748.1| DNA-cytosine methyltransferase [Rhodococcus wratislaviensis IFP
2016]
Length = 350
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 145/373 (38%), Gaps = 85/373 (22%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
A R L+ ++G GG+ +AD+ + V A +I+ A Y+ +FG Y G I++L
Sbjct: 4 AIRTLDLFAGAGGLSLGFEQADLGFEPVHAVEIDAAAARTYKRHFGCPVYDGPIEDLERF 63
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP-----PHMLFV 126
E A L PPCQ ++ G + + ++RA ++ EL H ++ P +
Sbjct: 64 E----DADVILGGPPCQGFSPLG-RDRDDESRA----QLNELWQHYLRAVRQVKPKAFVI 114
Query: 127 ENVVGFETSDTHAKMIEILANSDYLTQ-EF---ILSPLQFGVPYSRPRYFCLAKRKPLSF 182
ENV F+ S A+++E++ L + F +L+ +GVP R R +A R
Sbjct: 115 ENVPEFQRSAQFARLLELMETDRELKKYRFAYGVLNAADYGVPQRRRRGIFMAVRG---- 170
Query: 183 RCQLLNNQLLRSPSPLLGNDDMTV---ITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQ 239
++ P+P G D ++ +T HD
Sbjct: 171 -----RKKVPWPPAPTHGPDSVSATEYVTVHDA--------------------------- 198
Query: 240 VNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSL-----IERWGSAMDIVYP 294
G + TA + E V+ + + I P+SL I G+ D+
Sbjct: 199 ----IGDIPLATARTE-----VEVVDGQQDLHIGRNARPMSLARYQAIPEGGNRFDLA-- 247
Query: 295 DSKRCCCFTKSYYRYVKGTGSLLATV---QPKNKGKASSLKEQHLRYFTP--------RE 343
R K + GT ++ + +P + K + RY P RE
Sbjct: 248 -RNRPDLLPKCWANKPTGTTDVMGRLWWDRPSVTIRTEFYKPEKGRYLHPVADRPITHRE 306
Query: 344 VANLHSFPGDFQF 356
A L SFP DF+F
Sbjct: 307 AARLQSFPDDFEF 319
>gi|119511452|ref|ZP_01630563.1| modification methylase NlaIV [Nodularia spumigena CCY9414]
gi|119463917|gb|EAW44843.1| modification methylase NlaIV [Nodularia spumigena CCY9414]
Length = 433
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 16/173 (9%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ 66
+ R ++ +SGIGG+R + +A ++ ++ V + +IN A VYE NF H+ G+++
Sbjct: 2 QKIRFVDLFSGIGGIRLAFEQAANSLNIESECVLSSEINTDAQFVYETNFNHKSL-GDVR 60
Query: 67 NLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
++ H LL+ PCQ ++ G ++ D R F +I L+ T KP +F
Sbjct: 61 -----LIEKLPEHEVLLAGFPCQSFSHAGKKEGFGDTRGTLFFEITRLL-DTYKPQAFIF 114
Query: 126 VENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
ENV G + D T A + + Y F+L+ FG+P +R R + +
Sbjct: 115 -ENVRGIYSHDQGKTLATIKHEIQKRGYSFDAFLLNSANFGLPQNRVRIYLIG 166
>gi|427713414|ref|YP_007062038.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 6312]
gi|427377543|gb|AFY61495.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 6312]
Length = 323
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 13 WRVLEFYSGIGGMRYSLMKAD----VSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL 68
++ ++ + GIGG R + +A + + V + DI+ A Y NF P Q +I +
Sbjct: 2 FKCIDLFCGIGGFRVAANQASKDLGIDLKWVFSCDIDSHAQQTYFENFEDYP-QSDITTI 60
Query: 69 TAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+ ++ H L + PCQP++ G K D+R F +I ++ K P +E
Sbjct: 61 ESKDIP---DHDLLFAGFPCQPFSICGDLKGFEDSRGTLFFEIARILRE--KRPVAFVLE 115
Query: 128 NV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
NV VG T ++++IL Y +L+ L FG+P+ R R F + R+P +F
Sbjct: 116 NVKQLVGHNHGKTLRRILDILHEIGYFADYKVLNGLDFGIPHKRERIFIVGFREPYNF 173
>gi|395802256|ref|ZP_10481509.1| DNA-cytosine methyltransferase [Flavobacterium sp. F52]
gi|395435497|gb|EJG01438.1| DNA-cytosine methyltransferase [Flavobacterium sp. F52]
Length = 328
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+ V Y+G+GG+ A + FD KA Y NF H+ +G++ L +
Sbjct: 5 YTVGSLYAGVGGICLGFENAGFKLEWANEFD--KKACVTYRNNFEHKLIEGDVMQLDVKK 62
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
L+ PCQP++ G +K D+R F KIL+ I P ++F+ENV
Sbjct: 63 LNK--IDILTAGFPCQPFSLAGHRKGFKDSRGNHFFKILDFIDEM--RPKVVFLENVKNL 118
Query: 133 ETSDTHAKMIEI---LANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
+ D M I + +Y IL+ FG +P++R R F +A
Sbjct: 119 KGHDKGNTMKVIQREIKKRNYTFDSAILNTKDFGNIPHNRERIFMIA 165
>gi|325298663|ref|YP_004258580.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170]
gi|324318216|gb|ADY36107.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170]
Length = 463
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 141/365 (38%), Gaps = 61/365 (16%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLTAAE 72
+V F+SG GG+ +A + +V+ A DI ++ Y+ N + + +I+ L A+
Sbjct: 2 KVASFFSGCGGLDLGFEQAGI--EVIWANDIEASIHETYQYNHPNTILCKSDIRELHAS- 58
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
D+ ++ PPCQ ++ G Q +D R FL + LI K P +ENV G
Sbjct: 59 -DIPDCDGFIGGPPCQSWSEGGKQLGLNDERGKLFLDYVRLIKE--KQPKFFVIENVKGI 115
Query: 133 ETSDTHAK----MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 188
SD H + + IL Y+ +L+ F +P R R F + K L
Sbjct: 116 -ISDKHLQTFLSFLSILEKVGYIVSYALLNAADFRIPQDRYRVFVVGFLKDL-------- 166
Query: 189 NQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLS 248
N P P L N +T+ K + + V RF GD VN G
Sbjct: 167 NCNFHFPHP-LQNAHITL-----------QKAIGDINEVPRFYA---DGDTVNQTYGRWL 211
Query: 249 TGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYR 308
F A + + + W + +K C ++
Sbjct: 212 NHDVFTGPFDAK---------------FMSRNRVRAWNEVSFTIQAQAKNCPLHPQA--- 253
Query: 309 YVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYAL 368
+ + P + A E R F+ RE A + SFP F+F ++ +++ Y +
Sbjct: 254 ------PTMKYISPHKRIFAVGY-EHLYRRFSIRECARIQSFPDSFRFFYN-DIQEGYKM 305
Query: 369 LGNSL 373
+GN++
Sbjct: 306 VGNAV 310
>gi|397904752|ref|ZP_10505647.1| DNA-cytosine methyltransferase( EC:2.1.1.37 ) [Caloramator
australicus RC3]
gi|397162204|emb|CCJ32981.1| DNA-cytosine methyltransferase [Caloramator australicus RC3]
Length = 338
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 16/186 (8%)
Query: 4 DMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG 63
D+ K + ++ ++G+GG R +L + A+ V + +I++ +VY NFG PY G
Sbjct: 3 DIKKKSLYGFTFIDLFAGLGGFRIAL--ESLGAKCVFSSEIDESVREVYIENFGDIPY-G 59
Query: 64 NIQNLTAAELDMYG--AHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP 120
+I ++D Y H L + PCQ ++ G Q+ D+R F I ++ K
Sbjct: 60 DI-----TQIDEYSIPEHDILCAGFPCQAFSISGKQRGFEDSRGTLFFDIARIV--KAKK 112
Query: 121 PHMLFVENVVGFETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKR 177
P ++F+ENV F + D + + + + L F +L+ +G+P R R + + R
Sbjct: 113 PKIVFMENVKNFASHDNGKTLSVVKSIMEELGYTFYYKVLNAADYGIPQKRERIYMVCFR 172
Query: 178 KPLSFR 183
L+ +
Sbjct: 173 NDLAIK 178
>gi|229126345|ref|ZP_04255362.1| Cytosine-specific methyltransferase [Bacillus cereus BDRD-Cer4]
gi|228657116|gb|EEL12937.1| Cytosine-specific methyltransferase [Bacillus cereus BDRD-Cer4]
Length = 363
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 158/388 (40%), Gaps = 80/388 (20%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
E +V+ +SG GG+ L +A +++ A D++ A ++Y+ N G + +G+I ++
Sbjct: 6 EKLKVVSLFSGCGGLDLGLEQA--GFEILWANDVDKHAVEIYKHNIG-KIVEGDITKISE 62
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
E+ PCQP++ G +K D R F + + +I K P ++ ENV
Sbjct: 63 EEIP--SCDVLTAGFPCQPFSSAGNRKGVMDERGTLFEECIRVI--KAKKPLVVLFENVR 118
Query: 131 GFETSDT------HAKMIEILANSD--YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
G T+ ++ IL D Y + +L +GVP R R +A RK L
Sbjct: 119 GILTTKNLDGSLLLDSIVSILDELDPGYNVEYKLLKASDYGVPQQRYRVIFVAFRKDLDV 178
Query: 183 RCQLLNNQLLRSPSPLLGNDDMTVITKH------DQP--DDSWDKLLESCDPVERFLEFS 234
+ P P + D ++ H + P D+ W + P
Sbjct: 179 NYKF--------PLPTYDSSDPSLTVGHAINIPLNTPNQDEVW-----TLSP-------- 217
Query: 235 NSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYP 294
Q N ++ G + +I + ++P ER D +
Sbjct: 218 ----QSNKLIPYIKEGGS----------------WKNIPYEILP----ERLKKIRDDI-- 251
Query: 295 DSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDF 354
R F + + R + G++ A P+N G L++ R ++ RE+A + SFP DF
Sbjct: 252 KRYRAPNFYRRFARN-EINGTITAAATPENCGIIHPLED---RRYSVREIARIQSFPDDF 307
Query: 355 QFPHHLSLRQRYALLGNSLSIAVVAPLL 382
F S++ +Y ++GN+ V PLL
Sbjct: 308 IFVGE-SIQAKYRVIGNA-----VPPLL 329
>gi|425450655|ref|ZP_18830479.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
7941]
gi|389768406|emb|CCI06475.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
7941]
Length = 346
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 9/170 (5%)
Query: 17 EFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMY 76
+FY+GIGG R L + Q V + + N Y NF +++ L + L +
Sbjct: 22 DFYAGIGGFRLGL--EQIGWQCVFSNENNPDCVKTYNHNFHESMKPQDVEALIPSLLPDF 79
Query: 77 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFE 133
+ PCQP++R G QK D+R + +IL + K P ++F+ENV V
Sbjct: 80 --EVFCGGFPCQPFSRAGQQKGWQDSRGLAIQEILRICHE--KKPKVIFLENVSNIVRLN 135
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
++ L +YL ++ F +P SRPR+F LA RK L +
Sbjct: 136 QGQILKDILIQLKEINYLAFYAVIDSKYFQIPQSRPRFFLLAFRKDLGIK 185
>gi|406928102|gb|EKD63977.1| hypothetical protein ACD_51C00115G0004 [uncultured bacterium]
Length = 323
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 24/180 (13%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF---------------GH 58
+ ++ ++GIGG L ++ + V + +DKA YE NF G
Sbjct: 2 KFIDLFAGIGGFHLGLH--NIGGECVFVSEWDDKARITYEENFKTISPKVFETGLFSKGV 59
Query: 59 RPYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTV 118
++G+I + + + PCQP++ GL+K D+R F + +I H
Sbjct: 60 NLFEGDITKVDEKNIPKF--DILCAGFPCQPFSNAGLKKGFEDSRGTLFFDVSRIIKH-- 115
Query: 119 KPPHMLFVENVVGFET---SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
P ++F+ENV GF+ +T + E L N Y +L+ +GVP +R R + L
Sbjct: 116 HKPKVVFLENVKGFKNHNKGNTFHIVKETLENLGYKVYAEVLNAKDYGVPQNRERIYILG 175
>gi|443658652|ref|ZP_21132195.1| modification methylase HhaI [Microcystis aeruginosa DIANCHI905]
gi|159029905|emb|CAO90959.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443332886|gb|ELS47470.1| modification methylase HhaI [Microcystis aeruginosa DIANCHI905]
Length = 346
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 17 EFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMY 76
+FY+GIGG R L + Q V + + N Y NF +++ L + L +
Sbjct: 22 DFYAGIGGFRLGL--EQIGWQCVFSNENNPDCVKTYNHNFHESIKPQDVEALIPSLLPDF 79
Query: 77 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 136
+ PCQP++R G QK D+R + +IL + K P ++F+ENV +
Sbjct: 80 --EVFCGGFPCQPFSRAGQQKGWQDSRGLAIQEILRICHE--KKPKVIFLENVSNIMRLN 135
Query: 137 THAKMIEILAN---SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
+ +IL +YL ++ F +P SRPR+F LA RK L +
Sbjct: 136 QGQILKDILIQLKEINYLAFYAVIDSKYFQIPQSRPRFFLLAFRKDLGIK 185
>gi|425454475|ref|ZP_18834214.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9807]
gi|389804864|emb|CCI15801.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9807]
Length = 346
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 17 EFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMY 76
+FY+GIGG R L + Q V + + N Y NF +++ L + L +
Sbjct: 22 DFYAGIGGFRLGL--EQIGWQCVFSNENNPDCVKTYNHNFHESIKPQDVEALIPSLLPDF 79
Query: 77 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 136
+ PCQP++R G QK D+R + +IL + K P ++F+ENV +
Sbjct: 80 --EVFCGGFPCQPFSRAGQQKGWQDSRGLAIQEILRICHE--KKPKVIFLENVSNILRLN 135
Query: 137 THAKMIEIL---ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
+ +IL +YL ++ F +P SRPR+F LA RK L +
Sbjct: 136 QGQILKDILIQLKGINYLAFYAVIDSKYFQIPQSRPRFFLLAFRKDLGIK 185
>gi|425460405|ref|ZP_18839886.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9808]
gi|440755344|ref|ZP_20934546.1| modification methylase HhaI [Microcystis aeruginosa TAIHU98]
gi|389826918|emb|CCI22234.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9808]
gi|440175550|gb|ELP54919.1| modification methylase HhaI [Microcystis aeruginosa TAIHU98]
Length = 346
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 17 EFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMY 76
+FY+GIGG R L + Q V + + N Y NF +++ L + L +
Sbjct: 22 DFYAGIGGFRLGL--EQIGWQCVFSNENNPDCVKTYNHNFHESMKPQDVEALIPSLLPDF 79
Query: 77 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 136
+ PCQP++R G QK D+R + +IL + K P ++F+ENV +
Sbjct: 80 --EVFCGGFPCQPFSRAGQQKGWQDSRGLAIQEILRICHE--KKPKVIFLENVSNILRLN 135
Query: 137 THAKMIEIL---ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
+ +IL +YL ++ F +P SRPR+F LA RK L +
Sbjct: 136 KGQILKDILIQLKEINYLAFYAVIDSKYFQIPQSRPRFFLLAFRKDLGIK 185
>gi|150026187|ref|YP_001297013.1| type II modification methyltransferase [Flavobacterium
psychrophilum JIP02/86]
gi|149772728|emb|CAL44211.1| Probable type II modification methyltransferase [Flavobacterium
psychrophilum JIP02/86]
Length = 335
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 14 RVLEFYSGIGGMRYSL-MKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++++ ++GIGG+R + + + + V + N + Y N+ + G+I ++ +
Sbjct: 8 KIIDLFAGIGGIRLGFELASKNNIECVFTSEWNKYSEQTYLANYPNEIVHGDITQISETQ 67
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ H LL+ PCQP+++ GL+K SD R F I ++ K P +ENV
Sbjct: 68 IP---EHDILLAGFPCQPFSQAGLKKGFSDTRGTLFFDIERIL--IAKKPQAFLLENVKQ 122
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEF-ILSPLQFGVPYSRPRYFCLA 175
G + T A +IE L N Y ++ +L +FG+P +R R + +
Sbjct: 123 LKGHDKGKTLATIIEHLKNIGYENVQYEVLKAKEFGLPQNRERIYIVG 170
>gi|331677320|ref|ZP_08377999.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H591]
gi|331075055|gb|EGI46371.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H591]
Length = 415
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 23/220 (10%)
Query: 14 RVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
+ ++ +SG GG+R +A +S + V++ +I+ KA + Y+LNF Y
Sbjct: 3 KFVDLFSGTGGIRLGFEQAMKEIGLSTKCVKSSEIDKKACETYKLNFDEESY------CD 56
Query: 70 AAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
++D+ + LL+ PCQ ++ G Q +D R F ++ +I P + +EN
Sbjct: 57 IHDVDIDESFDVLLAGFPCQAFSYAGKQLGFADTRGTLFFEVERIIKKN--KPKLCLLEN 114
Query: 129 VVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK-RKPLSFRC 184
V G + D T + +++ L N Y + +L+ FGVP +R R + +A K ++
Sbjct: 115 VRGLTSHDKGRTFSTILKSLHNLGYHVEYRLLNTSNFGVPQNRVRIYIIASLEKEVTLTI 174
Query: 185 -QLLNNQLLRSPSPLLGNDDMTVITK-----HDQPDDSWD 218
L + + P G D +K D PD+S+D
Sbjct: 175 PNDLGAKDTHNYKPSKGGHDFYTESKVSDILEDSPDESYD 214
>gi|422794573|ref|ZP_16847248.1| DNA-cytosine methyltransferase, partial [Escherichia coli TA007]
gi|323968854|gb|EGB64190.1| DNA-cytosine methyltransferase [Escherichia coli TA007]
Length = 272
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQN 67
N+ +R+++ ++GIGG R + + + VV + + + A Y N+G P G+I
Sbjct: 67 NENGRYRMIDLFAGIGGTRLGFHQTN-AVNVVFSSEWDKFAQKTYHANYGDFP-DGDITK 124
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+ E D+ + PC +++ GL+K +D R F I +I K PH +E
Sbjct: 125 ID--EKDIPDHEILVGGFPCVAFSQAGLKKGFNDTRGTLFFDIARIIKE--KKPHAFLLE 180
Query: 128 NV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 184
NV +G + T + + L +Y I + FGVP +R R + + K
Sbjct: 181 NVKNLLGHDKGRTFSIIKNTLEELNYTVYYNIFAAKDFGVPQNRERIYIVGFNKE----- 235
Query: 185 QLLNNQLLRSPSPL 198
++ N++ P+PL
Sbjct: 236 KVRNHEHFTFPTPL 249
>gi|255066464|ref|ZP_05318319.1| modification methylase EcoRII [Neisseria sicca ATCC 29256]
gi|298369378|ref|ZP_06980696.1| modification methylase EcoRII [Neisseria sp. oral taxon 014 str.
F0314]
gi|255049344|gb|EET44808.1| modification methylase EcoRII [Neisseria sicca ATCC 29256]
gi|298283381|gb|EFI24868.1| modification methylase EcoRII [Neisseria sp. oral taxon 014 str.
F0314]
Length = 357
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+R ++ ++GIGG+R ++ Q V + +I+ A Y+ +G P+ G+I + +E
Sbjct: 50 FRFIDLFAGIGGIRLPF--EELGGQCVFSSEIDKFAKTTYQAFYGDVPH-GDITQIAPSE 106
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
+ + L PCQP+++ GL+K +D R F I E+I K P +ENV G
Sbjct: 107 IPDF--DLLLAGFPCQPFSQAGLKKGFTDTRGTMFFHIEEIIRQ--KHPKAFLLENVKGL 162
Query: 133 ETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
+ D T + + L Y +++ F +P +R R + + R
Sbjct: 163 KGHDKGRTFQTIYDSLTALGYTVNAKVMAAKDFNLPQNRERIYIVGFR 210
>gi|313674544|ref|YP_004052540.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
gi|312941242|gb|ADR20432.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
Length = 420
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ ++GIGG R ++ ++ + + + + KA Y NFG P+ ++T E
Sbjct: 98 FKFIDLFAGIGGFRIAMQ--NLGGKCIFTSEWDSKAKVTYRANFGEEPFG----DITKEE 151
Query: 73 LDMYGAHAWLL---SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
Y + L PCQ ++ G + D R F + E+I K P +F+ENV
Sbjct: 152 TKSYIPDNFDLLCAGFPCQAFSIAGRRGGFEDTRGTLFFDVAEIIRR--KKPKAIFLENV 209
Query: 130 VGFETSD---THAKMIEILAN--SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
G D T A ++ +L N Y+ + I++ +GVP R R F + RK L
Sbjct: 210 KGLRGHDKGKTLATILNVLRNELGYYVPEPEIINAKDYGVPQKRERIFIVGFRKDLK 266
>gi|374374531|ref|ZP_09632190.1| DNA-cytosine methyltransferase [Niabella soli DSM 19437]
gi|373233973|gb|EHP53767.1| DNA-cytosine methyltransferase [Niabella soli DSM 19437]
Length = 450
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++G+GG +L ++ + V A +++ +VY+ N+G P +G+I+ + ++
Sbjct: 2 KFIDLFAGLGGFHKALH--ELGHECVFASELSQTLREVYKTNWGIEP-KGDIRKIVDHDI 58
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVENVVG 131
D H L + PCQP+++ G QK D R F +I++++ H + P +ENV
Sbjct: 59 DSIPEHDILCAGFPCQPFSKAGKQKGREDEERGTLFDEIVKILAH--RKPKFFILENVPF 116
Query: 132 FETSDTHAK---MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
D A M L Y + + SP FG+P R R F +
Sbjct: 117 IRQHDNEATWNYMHSELTKLGYEVEHEVYSPQDFGIPQHRKRIFIVG 163
>gi|422303759|ref|ZP_16391110.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9806]
gi|389791274|emb|CCI12941.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9806]
Length = 346
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 9/170 (5%)
Query: 17 EFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMY 76
+FY+GIGG R L + Q V + + N Y NF +++ L + L +
Sbjct: 22 DFYAGIGGFRLGL--EQIGWQCVFSNENNPDCVKTYNHNFHESIKPQDVEALIPSLLPDF 79
Query: 77 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFE 133
+ PCQP++R G QK D+R + +IL + K P ++F+ENV V
Sbjct: 80 --EVFCGGFPCQPFSRAGQQKGWQDSRGLAIQEILRICHE--KKPKVIFLENVSNIVRLN 135
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
++ L +YL ++ F +P SRPR+F LA RK L +
Sbjct: 136 KGQILKDILIQLKEINYLAFYAVIDSKYFQMPQSRPRFFLLAFRKDLGIK 185
>gi|166366204|ref|YP_001658477.1| DNA cytosine methylase [Microcystis aeruginosa NIES-843]
gi|166088577|dbj|BAG03285.1| DNA cytosine methylase [Microcystis aeruginosa NIES-843]
Length = 346
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 9/170 (5%)
Query: 17 EFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMY 76
+FY+GIGG R L + Q V + + N Y NF +++ L + L +
Sbjct: 22 DFYAGIGGFRLGL--EQIGWQCVFSNENNPDCVKTYNHNFHESIKPQDVEALIPSLLPDF 79
Query: 77 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFE 133
+ PCQP++R G QK D+R + +I+ + K P ++F+ENV V
Sbjct: 80 --EVFCGGFPCQPFSRAGQQKGWQDSRGLAIQEIIRICHE--KKPKVIFLENVSNIVRLN 135
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
++ L +YL ++ F +P SRPR+F LA RK L +
Sbjct: 136 QGQILKDILIQLKEINYLAFYAVIDSKYFQIPQSRPRFFLLAFRKDLGIK 185
>gi|124024750|ref|YP_001013866.1| site-specific DNA methylase [Prochlorococcus marinus str. NATL1A]
gi|123959818|gb|ABM74601.1| Site-specific DNA methylase [Prochlorococcus marinus str. NATL1A]
Length = 305
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+R ++ ++GIGG+R ++ + V + + + + YE NFG P +G+I + A +
Sbjct: 5 FRFIDLFAGIGGIRIPF--EELGGECVFSSEWDKYSQITYEANFGEIP-KGDITKINAED 61
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ H L+ PCQ +++ GL+K D R F I ++ P +ENV
Sbjct: 62 IP---KHDLLVGGFPCQAFSQAGLKKGFQDTRGTLFFDIARIL--KFHKPKAFLLENVKH 116
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEF-ILSPLQFGVPYSRPRYFCLA 175
G ++ T ++ +L + Y T E+ +L+ FGVP +R R F
Sbjct: 117 LKGHDSGKTFKTIMNVLRDIGYQTIEYKVLNAKDFGVPQNRERIFIFG 164
>gi|399073745|ref|ZP_10750652.1| DNA-methyltransferase Dcm [Caulobacter sp. AP07]
gi|398041261|gb|EJL34333.1| DNA-methyltransferase Dcm [Caulobacter sp. AP07]
Length = 380
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 146/389 (37%), Gaps = 58/389 (14%)
Query: 17 EFYSGIGGMRYSLMKADVSA-----QVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
EF++G G R L A A V+A D D N ++G++ + A
Sbjct: 11 EFFAGGGMARLGLGGAWTCAFANDFDPVKAATYRDNHADAGSSNGEGHFHEGDVWKIAPA 70
Query: 72 ELDMYGAHAWLLSPPCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+L AW S PCQ ++ R GLQ S A F F K++E + + P + VE
Sbjct: 71 DLPGQADLAWA-SSPCQDFSLAGARAGLQGGRSSA-FFGFWKLMEALSAEGRGPDTVVVE 128
Query: 128 NVVGFETSDTHA---KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS--- 181
NV G TS A + LA+ Y + +F P SRPR F +A R+P+
Sbjct: 129 NVTGLLTSHGGADFTALCRALADQGYRFGALEIDAARF-TPQSRPRVFVVATRRPVDGLT 187
Query: 182 ----FRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSG 237
F+ + + R P+ L G + D P L +P
Sbjct: 188 GPSPFQTRAVREAHARLPADLQG---LWTWWGVDAPPARNTDLAALLEP----------D 234
Query: 238 DQVNTETGFLSTGTAAVDDFGAAEETVEVD-RCVSIDHFLVPLSLIERWGSAMDIVYPDS 296
DQV T T + D A V+ R S + + R G V D
Sbjct: 235 DQVAWRT---DAATQTLLDLMAPAHRAAVEARLASGQRAVGAVFRRMRGGQQRAEVRFDG 291
Query: 297 KRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQF 356
C T GS T+ + G+A S R TPRE A L P ++
Sbjct: 292 LAGCLRTPR-------GGSSRQTLLVIDGGQARS------RLITPREGARLMGLPDTYRL 338
Query: 357 PHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
P R + A L + + V AP++++L
Sbjct: 339 P-----RSQTAGL-HVIGDGVAAPVVRWL 361
>gi|308229518|gb|ADO24171.1| M.AciI [Arthrobacter citreus]
Length = 703
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 17/195 (8%)
Query: 2 EKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY 61
EK M K + ++ +SGIGG R +L K + + DI+ A + Y NFG P
Sbjct: 379 EKRMTK-----FSFIDLFSGIGGFRLALEKN--GGTCLFSSDIDKYARETYFNNFGEMP- 430
Query: 62 QGNIQNLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP 120
G+I + + + H L + PCQP++ G + D R F + +I K
Sbjct: 431 SGDITKIASENIPF---HDILCAGFPCQPFSIAGKRLGFEDTRGTLFFDVARIIKD--KR 485
Query: 121 PHMLFVENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
P +ENV G + D T + IL + +Y + +++ +GVP +R R++C+
Sbjct: 486 PKAFILENVAGIVSHDHGNTLDTISNILEDLNYTFEWKLMNAKDYGVPQNRNRWYCVGIN 545
Query: 178 KPLSFRCQLLNNQLL 192
L +N++
Sbjct: 546 NDLGVVSTSMNSEFF 560
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 9/176 (5%)
Query: 4 DMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG 63
D K ++++V+ +SGIGG L + +S+ V+ + +I+ A Y NF + G
Sbjct: 13 DNKKTGLKSYKVVSLFSGIGGFELGLKYSSLSSHVIFSSEIDKFAQQSYLANFPNHNLVG 72
Query: 64 NIQNLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH 122
+I + E+ H L+ PCQ ++ G + D R F + ++ K P
Sbjct: 73 DITKIDEQEIP---DHDILMGGFPCQAFSIAGNRHGFEDTRGTLFFNVARIL--NAKKPK 127
Query: 123 MLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
++F+ENV V + S T ++ L + Y I++ + G+P +R R + +
Sbjct: 128 VVFLENVKNLVSHDDSRTIHVILRTLNDLGYTVDFSIINSNEAGLPQNRDRTYIVG 183
>gi|383124600|ref|ZP_09945263.1| DNA (cytosine-5-)-methyltransferase [Bacteroides sp. 1_1_6]
gi|251841245|gb|EES69326.1| DNA (cytosine-5-)-methyltransferase [Bacteroides sp. 1_1_6]
Length = 448
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 10/170 (5%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ +R ++ ++G+GG +L K + + V A ++ + ++Y LN G + + G+I N
Sbjct: 2 KQYRFIDLFAGLGGFHLALEK--LGCKCVFASELQQELQELYYLNHGIKCH-GDI-NQVN 57
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDA--RAFSFLKILELIPHTVKPPHMLFVEN 128
+ D+ PCQP+++ G Q+ +D R F KI+E++ P +F+EN
Sbjct: 58 IKNDIPSHDILCAGFPCQPFSKAGKQEGFNDQQDRGNLFYKIMEIL--EFHKPEYVFLEN 115
Query: 129 VVGFETSDTHA--KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
V +T D H +I +S Y Q+ I+SP FGVP R R + + +
Sbjct: 116 VSNLKTHDNHNTYHVIYEKLSSLYDVQDAIISPHYFGVPQHRNRIYIVGR 165
>gi|166368724|ref|YP_001660997.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
gi|166091097|dbj|BAG05805.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
Length = 189
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL-D 74
++ ++G GG+ KA + +V AFD A DVY NF H + ++ ++ E+
Sbjct: 4 IDLFAGCGGLSLGFQKAGFT--IVAAFDNWIPAIDVYRNNFSHPIFNVDLSRESSQEIFA 61
Query: 75 MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET 134
Y + SPPCQ ++ G ++ RA L E++ T P +ENV E
Sbjct: 62 QYNPEIIVGSPPCQDFSSAG-KRDEGLGRANLTLTFAEIV--TGVSPQWFVMENVDRIEK 118
Query: 135 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
S + +I + Y E +++ GVP +R RYF + K K
Sbjct: 119 SKILTQAKQIFKSHGYGLTEKVINSCYCGVPQTRKRYFLIGKMK 162
>gi|119485563|ref|ZP_01619838.1| modification methylase [Lyngbya sp. PCC 8106]
gi|119456888|gb|EAW38015.1| modification methylase [Lyngbya sp. PCC 8106]
Length = 317
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 7/165 (4%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL-TAAE 72
RV++ ++G GG+ L +A + +V AFD + A VY+ NF H + GN+Q + TA +
Sbjct: 2 RVVDLFAGCGGLSLGLQQAGFN--IVAAFDDWESAIKVYQKNFAHPIFSGNLQEVQTAVD 59
Query: 73 L-DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
L + + + PPCQ ++ G ++ + R L ++I T P +ENV
Sbjct: 60 LIKPFSPNVIVGGPPCQDFSSAG-KRDENLGRGDLTLAFSDII--TRIKPQWFILENVEL 116
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
F+ S +++ + S Y E + GVP R R+F + +
Sbjct: 117 FKKSRQYSQAKALFEQSGYGLTEKVFDASLCGVPQKRKRFFWVGE 161
>gi|430375877|ref|ZP_19430280.1| DNA-cytosine methyltransferase [Moraxella macacae 0408225]
gi|429541108|gb|ELA09136.1| DNA-cytosine methyltransferase [Moraxella macacae 0408225]
Length = 349
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 10/170 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
R ++ ++GIGG +L A A+ V A + + A+ Y N+G P+ G+I + A +
Sbjct: 7 RFIDLFAGIGGFHTAL--ASFGAKCVFACEWDMHASKTYHANYGILPF-GDITKIDEAAI 63
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF- 132
+ H PCQ ++ G Q+ D R F +I ++ H P ++ +ENV F
Sbjct: 64 PAH--HILCAGFPCQAFSISGKQQGFDDVRGTLFFEIARIVKH--HQPKLILLENVKNFI 119
Query: 133 --ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
+T +++IL +Y +L+ FG+P +R R + + RK +
Sbjct: 120 KHNNQNTLKTVLKILDELNYQVFYQVLNASDFGLPQNRERVYFVCFRKDI 169
>gi|1657420|gb|AAC45971.1| DNA cytosine methyltransferase M.SenPI [Salmonella enterica subsp.
enterica serovar Enteritidis]
Length = 379
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQN 67
N+ +R+++ ++GIGG R + + + VV + + + A Y N+G P G+I
Sbjct: 67 NENGRYRMIDLFAGIGGTRLGFHQTN-AVNVVFSSEWDKFAQKTYHANYGDFP-DGDITK 124
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+ E D+ + PC +++ GL+K +D R F I +I K PH +E
Sbjct: 125 ID--EKDIPDHEILVGGFPCVAFSQAGLKKGFNDTRGTLFFDIARIIKE--KKPHAFLLE 180
Query: 128 NV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 184
NV +G + T + + L +Y I + FGVP +R R + + K
Sbjct: 181 NVKNLLGHDKGRTFSIIKNTLEELNYTVYYNIFAAKDFGVPQNRERIYIVGFNKE----- 235
Query: 185 QLLNNQLLRSPSPL 198
++ N++ P+PL
Sbjct: 236 KVRNHEHFTFPTPL 249
>gi|304390602|ref|ZP_07372555.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326358|gb|EFL93603.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 321
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Query: 11 EAWR--VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL 68
E WR V++ +SG GGM SL QVV AFD A D+Y+ NF H + ++
Sbjct: 21 EGWRMRVIDLFSGCGGM--SLGFEQGGYQVVAAFDNWQPAVDIYKENFQHPIHNIDLATD 78
Query: 69 TAAE-LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
A E ++ + PPCQ Y+ G K+ RA ++ E++ VKP ++F E
Sbjct: 79 EALEIIEQAKPDVIIGGPPCQDYSIAG--KRKLGQRANLTIRFAEIVVR-VKPKWVVF-E 134
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
NV E T M +L+++ Y +L GVP R R+F + +
Sbjct: 135 NVYNIERFSTLPVMKAMLSDAGYGLSSKVLDASLCGVPQKRRRFFLVGR 183
>gi|193216537|ref|YP_001999779.1| cytosine-specific methyltransferase, related to HhaI [Mycoplasma
arthritidis 158L3-1]
gi|193001860|gb|ACF07075.1| cytosine-specific methyltransferase, related to HhaI [Mycoplasma
arthritidis 158L3-1]
Length = 327
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 16/176 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++G+GG R +L A+ V + + + A +VY++NF P G+I + E
Sbjct: 13 KFIDLFAGLGGFRIAL--ESCGAKCVYSNEWDKHAQEVYKMNFNEIP-DGDITLIN--EN 67
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
D+ PCQ ++ G Q+ D+R F + ++ K P ++F+ENV F
Sbjct: 68 DIPDHDVLCAGFPCQAFSISGKQRGFQDSRGTLFFDVARIV--RAKKPKVVFMENVKNFA 125
Query: 134 TSDTHAKMIEILANS------DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
+ D + ++++ N+ D+ ++ +L+ L FGVP R R + + R+ L+ +
Sbjct: 126 SHD-NGNTLKVVRNTMIDLGYDFYSE--VLNSLNFGVPQKRERIYMVCFRRDLNIK 178
>gi|225862882|ref|YP_002748260.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
gi|225789623|gb|ACO29840.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
Length = 360
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQNLTAAE 72
RV++ + G GG+ + ++V DIN+ A + + NF + Y +I+ + +
Sbjct: 4 RVIDLFCGCGGISEGFRLS--GFEIVGGLDINEDAVETFNKNFPDSQAYCADIEKIKNDD 61
Query: 73 L----DMYGAHAWLLS-PPCQPYTRQG-LQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
+ D+ G ++ PPCQ ++ QK+ D R F + + + V P ++ +
Sbjct: 62 IPFMFDLLGDIDVIVGGPPCQGFSSANRWQKEIEDPRNKLFYEYIRFV--EVLKPKVVLI 119
Query: 127 ENVVGFETSDT---HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
ENV G T D K+ EIL S Y +L ++GVP R R F LA R+ +
Sbjct: 120 ENVRGILTRDNGYAKNKIYEILQRSGYNVDSAVLDASEYGVPQKRLRAFFLATRQDIP-- 177
Query: 184 CQLLNNQLLRSPSPLLGN--DDMTVITKHDQPDDS 216
Q+ +L++ P L+ +++ V+ K Q ++
Sbjct: 178 -QITFEKLVKQPKVLVKEAIEELYVLEKKAQKGET 211
>gi|1871451|dbj|BAA11167.1| C5-cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhi]
gi|3421011|emb|CAA76526.1| M.Ecl18kI (DNA-methyltransferase) [Enterobacter cloacae]
gi|360047424|gb|AEV93420.1| type II DNA-methyltransferase StyD4I [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 379
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQN 67
N+ +R+++ ++GIGG R + + + VV + + + A Y N+G P G+I
Sbjct: 67 NENGRYRMIDLFAGIGGTRLGFHQTN-AVNVVFSSEWDKFAQKTYHANYGDFP-DGDITK 124
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+ E D+ + PC +++ GL+K +D R F I +I K PH +E
Sbjct: 125 ID--EKDIPDHEILVGGFPCVAFSQAGLKKGFNDTRGTLFFDIARIIKE--KKPHAFLLE 180
Query: 128 NV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 184
NV +G + T + + L +Y I + FGVP +R R + + K
Sbjct: 181 NVKNLLGHDKGRTFSIIKNTLEELNYTVYYNIFAAKDFGVPQNRERIYIVGFNKE----- 235
Query: 185 QLLNNQLLRSPSPL 198
++ N++ P+PL
Sbjct: 236 KVRNHEHFTFPTPL 249
>gi|146298415|ref|YP_001193006.1| DNA-cytosine methyltransferase [Flavobacterium johnsoniae UW101]
gi|146152833|gb|ABQ03687.1| DNA-cytosine methyltransferase [Flavobacterium johnsoniae UW101]
Length = 329
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
V Y+G+GG+ KA + FD N A Y+ NF H +G++ L L
Sbjct: 5 VGSLYAGVGGICLGFKKAGFELEWANEFDKN--ACITYKNNFEHNLIEGDVMALDVTSLK 62
Query: 75 MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET 134
+ PCQP++ G +K D+R F KIL+ + P+++F+ENV +
Sbjct: 63 K--INILTAGFPCQPFSVAGYRKGFEDSRGNHFFKILDFVDEM--RPNVIFLENVKNLKG 118
Query: 135 SDTHAKMIEILANS----DYLTQEFILSPLQFG-VPYSRPRYFCLA 175
D I+++ N Y +L+ FG +P++R R F +A
Sbjct: 119 HDK-GNTIKVIENEIRKRGYTFDSAVLNTKDFGNIPHNRERIFIVA 163
>gi|32470131|ref|NP_863573.1| DNA-methyltransferase MKpn2kI [Klebsiella pneumoniae]
gi|386622391|ref|YP_006147220.1| type II DNA-methyltransferase [Escherichia coli O7:K1 str. CE10]
gi|462656|sp|P34879.1|MTS2_SHISO RecName: Full=Modification methylase SsoII; Short=M.SsoII; AltName:
Full=Cytosine-specific methyltransferase SsoII
gi|11559818|gb|AAG38101.1|AF300473_2 DNA-methyltransferase MKpn2kI [Klebsiella pneumoniae]
gi|294244|gb|AAA98279.1| C5-cytosine methylase [Plasmid P4]
gi|349741575|gb|AEQ15936.1| type II DNA-methyltransferase [Escherichia coli O7:K1 str. CE10]
Length = 379
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQN 67
N+ +R+++ ++GIGG R + + + VV + + + A Y N+G P G+I
Sbjct: 67 NENGRYRMIDLFAGIGGTRLGFHQTN-AVNVVFSSEWDKFAQKTYHANYGDFP-DGDITK 124
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+ E D+ + PC +++ GL+K +D R F I +I K PH +E
Sbjct: 125 ID--EKDIPDHEILVGGFPCVAFSQAGLKKGFNDTRGTLFFDIARIIKE--KKPHAFLLE 180
Query: 128 NV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 184
NV +G + T + + L +Y I + FGVP +R R + + K
Sbjct: 181 NVKNLLGHDKGRTFSIIKNTLEELNYTVYYNIFAAKDFGVPQNRERIYIVGFNKE----- 235
Query: 185 QLLNNQLLRSPSPL 198
++ N++ P+PL
Sbjct: 236 KVRNHEHFTFPTPL 249
>gi|425464802|ref|ZP_18844112.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9809]
gi|389833097|emb|CCI22700.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9809]
Length = 347
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 19/179 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
W ++ ++G+GG R +L ++ Q V + +I+ + Y N+GH P +I+ L A
Sbjct: 2 WTFIDLFAGVGGFRIAL--ENLGCQCVFSSEIDPHSQKGYLANYGHLPDNQDIRKLEAKT 59
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H L PCQ ++ G + DAR F ++ ++ K P +ENV G
Sbjct: 60 VP---DHDILCGGFPCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQG 114
Query: 132 FETSDTHAKMIEILANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 182
D + IL D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 115 LVHHDRGKTLKTIL---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|440753325|ref|ZP_20932528.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa TAIHU98]
gi|440177818|gb|ELP57091.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa TAIHU98]
Length = 306
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 6/165 (3%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE-L 73
++ ++G GG+ KA + +V AFD A DVY NF H + ++ ++ E L
Sbjct: 3 TIDLFAGCGGLSLGFQKAGFT--IVAAFDNWIPAIDVYRNNFSHPIFNVDLSRESSQEIL 60
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
Y + SPPCQ ++ G ++ RA L E++ T P +ENV E
Sbjct: 61 AQYNPEIIVGSPPCQDFSSAG-KRDEGLGRANLTLTFAEIV--TRVSPQWFVMENVDRIE 117
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
S + +I + Y E +++ GVP +R RYF + K K
Sbjct: 118 KSKILIQAKQIFKSHGYGLTEKVINSCYCGVPQTRKRYFLIGKMK 162
>gi|443657878|ref|ZP_21131993.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa DIANCHI905]
gi|159029640|emb|CAO87718.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443333088|gb|ELS47664.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa DIANCHI905]
Length = 306
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 6/165 (3%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE-L 73
++ ++G GG+ KA + +V AFD A DVY NF H + ++ + E L
Sbjct: 3 TIDLFAGCGGLSLGFQKAGFT--IVAAFDNWIPAIDVYSNNFSHPIFNVDLSRESNQEIL 60
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
Y + SPPCQ ++ G ++ RA L E++ T P +ENV E
Sbjct: 61 AQYNPEIIVGSPPCQDFSSAG-KRDEGLGRANLTLTFAEIV--TRLTPQWFVMENVARIE 117
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
S + +I + Y E +++ GVP +R RYF + K K
Sbjct: 118 KSKILIQAKQIFKSHGYGLTEKVINSCYCGVPQTRKRYFMIGKMK 162
>gi|363890146|ref|ZP_09317490.1| hypothetical protein HMPREF9628_01932 [Eubacteriaceae bacterium
CM5]
gi|361965982|gb|EHL18935.1| hypothetical protein HMPREF9628_01932 [Eubacteriaceae bacterium
CM5]
Length = 320
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 13/197 (6%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH--RPYQGNIQNL 68
E VLE + GIG +R + ++ +S ++V+ +++ Y +G RP Q ++
Sbjct: 7 EEINVLELFGGIGAIRKAFIRQKISHRIVDYVEVDKNCVKSYNALYGEDFRP-QDIVKYH 65
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLF 125
+ E + H PCQ ++R GL+K + S R+ + + +I + P ++
Sbjct: 66 SPDERIDFVMHG----SPCQDFSRSGLKKGGEKGSGTRSSLLFETIRIIEEMKEKPKVVL 121
Query: 126 VENVVGFETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSF 182
ENV G + A L + L E IL+ + FG+P +R R F ++ F
Sbjct: 122 WENVKGVLDKNMRASFFHYLKEMERLGYESKYKILNAMDFGIPQNRKRIFVVSILGQNDF 181
Query: 183 RCQLLNNQLLRSPSPLL 199
+ L N RS L
Sbjct: 182 DFETLKNAETRSIDDFL 198
>gi|327403407|ref|YP_004344245.1| DNA-cytosine methyltransferase [Fluviicola taffensis DSM 16823]
gi|327318915|gb|AEA43407.1| DNA-cytosine methyltransferase [Fluviicola taffensis DSM 16823]
Length = 422
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 10/174 (5%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ ++GIGG R +L ++ + V + +++A Y+ NFG P+ G+I +
Sbjct: 97 FKFIDLFAGIGGFRLALQ--NLGGKCVFTSEWDEQAKKTYQANFGEIPF-GDITKDSTKA 153
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
G PCQ ++ G + D R F + E+I K P F+ENV G
Sbjct: 154 FIPDGFDVLCGGFPCQAFSIAGKRGGFEDTRGTLFFDVAEIIKQ--KQPKAFFLENVKGL 211
Query: 133 ETSDTHAKMIEILA--NSD---YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
D + IL D Y+ +++ FGVP +R R F + RK L+
Sbjct: 212 FNHDKGKTLKTILNVLREDLGYYVPDPKVMNAKNFGVPQNRERIFIVGFRKDLN 265
>gi|315637499|ref|ZP_07892709.1| modification methylase EcoRII [Arcobacter butzleri JV22]
gi|315478217|gb|EFU68940.1| modification methylase EcoRII [Arcobacter butzleri JV22]
Length = 326
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 9/167 (5%)
Query: 13 WRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
++ ++ ++GIGG+R K ++ V A +++ A Y N+ +PY G+I +
Sbjct: 20 YKFIDLFAGIGGIRTGFEKVFKEESEFVFASELDRYAQIAYFENYNEKPY-GDITKIN-- 76
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
E D+ L PCQ ++ G +K D R F + ++ P ++F+ENV G
Sbjct: 77 EEDIPNHDIVLAGFPCQAFSIAGHRKGFEDIRGTLFFDVARIVDK--HKPQVVFLENVKG 134
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
F+ D T + L N Y +L+ FGVP +R R + +A
Sbjct: 135 FKNHDKGNTFNTIKSTLENMGYRVFAEVLNAKDFGVPQNRERIYIIA 181
>gi|289423024|ref|ZP_06424844.1| putative site-specific DNA-methyltransferase [Peptostreptococcus
anaerobius 653-L]
gi|289156598|gb|EFD05243.1| putative site-specific DNA-methyltransferase [Peptostreptococcus
anaerobius 653-L]
Length = 706
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 11/190 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++GIGG R A + V + +I+D A ++YELNFG P + +I L ++
Sbjct: 7 KFIDLFAGIGGFRLGFENA--GCKCVFSSEIDDHACEMYELNFGENP-RCDITQLNPKDI 63
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
+ PCQ ++ G QK D R F I +I K P +ENV
Sbjct: 64 PDF--DILCAGFPCQAFSICGKQKGFYDETRGTLFFDICRIIEE--KKPKAFVLENVSNL 119
Query: 133 ETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 189
E D T M+ +L+ Y +L+ FGVP +R R + +F L
Sbjct: 120 EKHDSGRTLTVMLSVLSELGYTVVYKVLNARNFGVPQNRERIIIVGNLNGRAFDFTKLKT 179
Query: 190 QLLRSPSPLL 199
+ + P L
Sbjct: 180 NTIETMKPFL 189
>gi|169794286|ref|YP_001712079.1| cytosine-specific methyltransferase [Acinetobacter baumannii AYE]
gi|213159140|ref|YP_002321138.1| DNA cytosine methyltransferase [Acinetobacter baumannii AB0057]
gi|215481844|ref|YP_002324026.1| Modification methylase HgiDII(Cytosine-specificmethyltransferase
HgiDII) [Acinetobacter baumannii AB307-0294]
gi|332850048|ref|ZP_08432435.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013150]
gi|332871527|ref|ZP_08440021.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013113]
gi|417575262|ref|ZP_12226115.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii Canada
BC-5]
gi|421623462|ref|ZP_16064347.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
OIFC074]
gi|421641908|ref|ZP_16082439.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
IS-235]
gi|421647936|ref|ZP_16088347.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
IS-251]
gi|421657072|ref|ZP_16097353.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
Naval-83]
gi|421698463|ref|ZP_16138005.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii IS-58]
gi|421795872|ref|ZP_16231947.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
Naval-21]
gi|421799550|ref|ZP_16235541.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii Canada
BC1]
gi|169147213|emb|CAM85072.1| putative cytosine-specific methyltransferase [Acinetobacter
baumannii AYE]
gi|213058300|gb|ACJ43202.1| DNA cytosine methyltransferase [Acinetobacter baumannii AB0057]
gi|213986404|gb|ACJ56703.1| Modification methylase HgiDII(Cytosine-specificmethyltransferase
HgiDII) [Acinetobacter baumannii AB307-0294]
gi|332730897|gb|EGJ62203.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013150]
gi|332731381|gb|EGJ62673.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013113]
gi|400205995|gb|EJO36975.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii Canada
BC-5]
gi|404572763|gb|EKA77805.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii IS-58]
gi|408514660|gb|EKK16266.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
IS-235]
gi|408516130|gb|EKK17709.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
IS-251]
gi|408693248|gb|EKL38858.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
OIFC074]
gi|408714638|gb|EKL59778.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
Naval-83]
gi|410401023|gb|EKP53185.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
Naval-21]
gi|410409572|gb|EKP61500.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii Canada
BC1]
Length = 355
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLTAAE 72
+V++F+SG GG L +A + + FDI KA + Y+ NF Y +I+ L E
Sbjct: 2 KVIDFFSGCGGASEGLRQAGLDITIGLDFDI--KAAETYQANFPEALFYNVDIRELDEKE 59
Query: 73 LDMYGAHA--------WLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
L ++ PCQP++ Q K D R + L +KP ++L
Sbjct: 60 LAKAFKEKNREKEPLLFVACAPCQPFSTQNKSKSEDDIRR-TLLDETHRFISKLKPEYIL 118
Query: 125 FVENVVGFETSDT-----HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
VENV G + D + + I L + Y EFI ++GVP R R+ LA +
Sbjct: 119 -VENVPGLQKIDKEKDGPYKRFITFLESKKYKITEFIAKSEEYGVPQKRKRFVLLASK 175
>gi|399925718|ref|ZP_10783076.1| DNA-cytosine methyltransferase [Myroides injenensis M09-0166]
Length = 329
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
V Y+G+GG+ + + + FD N A Y+ NF H QG++ + +L
Sbjct: 12 VGSLYAGVGGICLGFINSGYTVSWANEFDKN--ACTTYKKNFKHDLIQGDVFAIDLKKLS 69
Query: 75 MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET 134
A PCQP++ G +K D R F +ILE + T++P ++F+ENV +T
Sbjct: 70 SIDVLAAGF--PCQPFSVAGYRKGFDDHRGNHFFRILEFV-DTIRPK-VVFLENVKNLKT 125
Query: 135 SDTHAKMIEILANS----DYLTQEFILSPLQFG-VPYSRPRYFCLA 175
D +++ NS +Y Q +L+ +G +P++R R F +A
Sbjct: 126 HD-KGNTFKVIENSLRERNYSFQAQVLNTKSYGNIPHNRERIFMVA 170
>gi|425465275|ref|ZP_18844585.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9809]
gi|389832515|emb|CCI23796.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9809]
Length = 405
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 6/170 (3%)
Query: 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
G ++ ++G GG+ KA + +V AFD A DVY NF H + ++ +
Sbjct: 93 GSKMITIDLFAGCGGLSLGFQKAGFT--IVAAFDNWIPAIDVYRNNFSHPIFNVDLSRES 150
Query: 70 AAE-LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
+ E L Y + SPPCQ ++ G ++ RA L E++ T P +EN
Sbjct: 151 SQEILAQYNPEIIVGSPPCQDFSSAG-KRDEGLGRANLTLTFAEIV--TGVSPQWFVMEN 207
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
V E S +I + Y E +++ GVP +R RYF + K K
Sbjct: 208 VDRIEKSKILTLAKQIFKSHGYGLTEKVINSCYCGVPQTRKRYFLIGKMK 257
>gi|30019096|ref|NP_830727.1| Type II restriction-modification system methylation subunit
[Bacillus cereus ATCC 14579]
gi|29894639|gb|AAP07928.1| Type II restriction-modification system methylation subunit
[Bacillus cereus ATCC 14579]
Length = 373
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 159/389 (40%), Gaps = 82/389 (21%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
E +V+ +SG GG+ L +A +++ A D++ A ++Y+ N G + +G+I ++
Sbjct: 16 EKLKVVSLFSGCGGLDLGLEQA--GFEILWANDVDKHAVEIYKHNIG-KIVEGDITKISE 72
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
E+ PCQP++ G +K D R F + + +I K P ++ ENV
Sbjct: 73 EEIP--SCDVLTAGFPCQPFSSAGNRKGVMDERGTLFEECIRVI--KAKKPLVVLFENVR 128
Query: 131 GFETSDT------HAKMIEILANSD--YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
G T+ ++ IL D Y + +L +GVP R R +A RK L
Sbjct: 129 GILTTKNLDGSLLLDSIVSILDELDPGYNVEYKLLKASDYGVPQQRYRVIFVAFRKDLDV 188
Query: 183 RCQLLNNQLLRSPSPLLGNDDMTVITKH------DQP--DDSWDKLLESCDPVERFLEFS 234
+ P P + D ++ H + P D+ W + P
Sbjct: 189 NYKF--------PLPTYDSSDPSLTVGHAINIPLNTPNQDEVW-----TLSP-------- 227
Query: 235 NSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYP 294
Q N ++ G + +I + ++P ER D +
Sbjct: 228 ----QSNKLIPYIKEGGS----------------WKNIPYEILP----ERLKKIRDDI-- 261
Query: 295 DSKRCCCFTKSYYR-YVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGD 353
R F + + R + GT + AT P+N G L++ R ++ RE+A + SFP D
Sbjct: 262 KRYRAPNFYRRFARNEINGTITAAAT--PENCGIIHPLED---RRYSVREIARIQSFPDD 316
Query: 354 FQFPHHLSLRQRYALLGNSLSIAVVAPLL 382
F F S++ +Y ++GN+ V PLL
Sbjct: 317 FIFVGE-SIQAKYRVIGNA-----VPPLL 339
>gi|260886138|ref|ZP_05736578.2| modification methylase EcoRII [Prevotella tannerae ATCC 51259]
gi|260850757|gb|EEX70626.1| modification methylase EcoRII [Prevotella tannerae ATCC 51259]
Length = 427
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 9/174 (5%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ ++G+GG R +L + + + V + + A Y N+G P+ G+I +
Sbjct: 105 FKFIDLFAGVGGFRLALQR--IGGRCVYSSEFEPNAQQTYLANYGEMPF-GDITKESTKS 161
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
PCQP++ G QK +D R F + +++ K P ++F+ENV
Sbjct: 162 YIPDNFDVLCAGFPCQPFSISGKQKGFADTRGTLFFDVCQILER--KHPSVVFLENVKHL 219
Query: 133 ETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK-RKPLSF 182
+ D T ++E L Y T+ IL+ FGVP +R R + ++P F
Sbjct: 220 QYHDGGRTLEVILEKLKELGYHTEWKILNAADFGVPQNRERIIIIGSLKQPFVF 273
>gi|210632067|ref|ZP_03297189.1| hypothetical protein COLSTE_01082 [Collinsella stercoris DSM 13279]
gi|210159724|gb|EEA90695.1| DNA (cytosine-5-)-methyltransferase [Collinsella stercoris DSM
13279]
Length = 392
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA--E 72
+++ ++G GG+ A VV A++ D A Y LNF H Q ++ ++ AA E
Sbjct: 5 IVDLFAGCGGLSKGFELAGF--DVVAAYENWDSAIACYNLNFNHSAKQLDLNDVDAAVQE 62
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDAR-AFSFLKILELIPHTVKPPHMLFVENVVG 131
+ A + PPCQ ++ G + ++ A S+ I++ I P +ENV
Sbjct: 63 IAPMKPTAIIGGPPCQDFSHAGKRIEAGRAGLTESYANIIQQIR-----PRCFVMENVAR 117
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
++S +A EI + Y E +L+ GVP SR R+FC+
Sbjct: 118 AQSSHAYAVAREIFKTAGYGLTEQVLTASFCGVPQSRKRFFCIG 161
>gi|386816060|ref|ZP_10103278.1| DNA-cytosine methyltransferase [Thiothrix nivea DSM 5205]
gi|386420636|gb|EIJ34471.1| DNA-cytosine methyltransferase [Thiothrix nivea DSM 5205]
Length = 432
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 16/171 (9%)
Query: 13 WRVLEFYSGIGGMRY----SLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL 68
R ++ ++G+GG+R ++ + + Q V + +I+ A + Y LNFG P QG+I +
Sbjct: 2 MRFVDLFAGVGGIRLGFEQTMQELGIPHQCVLSSEIDKFAQETYALNFGEMP-QGDIYGI 60
Query: 69 TA-AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
E D L PCQP++ G Q+ D R F ++ ++ P +E
Sbjct: 61 RQFPEFDF-----LLAGFPCQPFSYAGKQQGFGDTRGTLFFEVERILRE--HQPKGFLLE 113
Query: 128 NVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
NV G T D T +++ L Y + +L+ FG+P +R R + +
Sbjct: 114 NVRGLTTHDKGRTFKTILQHLEALGYGVEYLLLNGSSFGIPQNRVRVYIVG 164
>gi|402553563|ref|YP_006594834.1| site-specific DNA methylase [Bacillus cereus FRI-35]
gi|401794773|gb|AFQ08632.1| site-specific DNA methylase [Bacillus cereus FRI-35]
Length = 430
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
V+ ++G GGM + A FD+N A + Y N G G+I + + E+
Sbjct: 7 VVSLFAGAGGMDLGFIHAGFDVIWANDFDVN--AVNTYRKNIGDHIVHGDITQIPSEEIP 64
Query: 75 MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET 134
+ PCQ ++ ++ D R F +L++L ++ K P ENV G
Sbjct: 65 GEDVDVVIGGFPCQGFSVANTKRSMEDKRNFLYLELLRIVKD--KKPKFFVAENVKGL-L 121
Query: 135 SDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
S + K+IE++ N Y + +L+ +GVP R R + R
Sbjct: 122 SMSKGKVIEMIKNDFEKLGYTVEYRVLNAADYGVPQLRERVIIIGNR 168
>gi|167648711|ref|YP_001686374.1| DNA-cytosine methyltransferase [Caulobacter sp. K31]
gi|167351141|gb|ABZ73876.1| DNA-cytosine methyltransferase [Caulobacter sp. K31]
Length = 375
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 99/232 (42%), Gaps = 43/232 (18%)
Query: 17 EFYSGIGGMRYSLMKADVSA-----QVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
EF++G G R L +A A V+A D D +F ++G++ + AA
Sbjct: 11 EFFAGGGMARLGLGEAWTCAFANDFDPVKAATYRDNHKDAAT-HF----HEGDVWKIAAA 65
Query: 72 ELDMYGAHAWLLSPPCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+L AW S PCQ ++ R GLQ S A F F K++E + + P + VE
Sbjct: 66 DLPGQADLAWA-SSPCQDFSLAGARAGLQGGRSSA-FFGFWKLMEALNAEGRGPDTVVVE 123
Query: 128 NVVGFETSDTHA---KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS--- 181
NVVG TS A + LA+ Y + +F VP SRPR F +A R P+
Sbjct: 124 NVVGLLTSHGGADFTALCRALADQGYRFGALEIDAARF-VPQSRPRVFVVATRLPVGDLA 182
Query: 182 ----FRCQLLNNQLLRSPSPLLG-------------NDDMTVITKHDQPDDS 216
F+ + + R P L G N D+T + +PDD+
Sbjct: 183 GPSPFQTRAVREAHARLPPDLQGLWTWWGVDAPPARNTDLTALL---EPDDA 231
>gi|339321014|ref|YP_004683536.1| cytosine-specific DNA methylase [Mycoplasma bovis Hubei-1]
gi|392430096|ref|YP_006471141.1| DNA-methyltransferase [Mycoplasma bovis HB0801]
gi|338227139|gb|AEI90201.1| cytosine-specific DNA methylase [Mycoplasma bovis Hubei-1]
gi|392051505|gb|AFM51880.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma bovis HB0801]
Length = 479
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++ +SGIGG ++ K + + V A DI+ +Y+ N+ Y ++T ++
Sbjct: 9 IDLFSGIGGFHQAMSK--LGGECVFASDIDIDCAKIYKKNYSIDSYS----DITKVSVEN 62
Query: 76 YGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF-- 132
H L + PCQ +++ G Q +DAR F I ++ H P +ENV F
Sbjct: 63 IPKHDVLCAGFPCQAFSKAGKQAGINDARGTLFYDIARILEH--HKPKFFILENVRNFVS 120
Query: 133 -ETSDTHAKMIEILANSDY-LTQE-FILSPLQFGVPYSRPRYFCLAKRKP 179
++ +T A + IL + Y LT +LSP QFGVP R R + L + P
Sbjct: 121 HDSGNTWAIVKNILRSLGYRLTYSPLVLSPHQFGVPQFRERVYILGQYDP 170
>gi|317504402|ref|ZP_07962385.1| modification methylase Sau3AI [Prevotella salivae DSM 15606]
gi|315664482|gb|EFV04166.1| modification methylase Sau3AI [Prevotella salivae DSM 15606]
Length = 579
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 89/424 (20%), Positives = 170/424 (40%), Gaps = 56/424 (13%)
Query: 5 MCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVV-----EAFDINDKANDVYELNFGHR 59
M K + +V+E ++G+GG R L A + + E I+ A+ VY FG +
Sbjct: 1 MSKTNYHKIKVVELFAGVGGFRIGLEGASDDYETIWNNQWEPSTIHQDASLVYRARFGSK 60
Query: 60 PY-QGNIQNLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARA------FSFLKIL 111
+ +I N+ A + H L+ PCQ Y+ S + +IL
Sbjct: 61 GHCNEDINNVDTANIP---NHDLLVGGFPCQDYSVASTLSHSGGIEGKKGVLWWQIYRIL 117
Query: 112 ELIPHTVKPPHMLFVENVVGFETSDTH------AKMIEILANSDYLTQEFILSPLQFGVP 165
+ + PH LF ENV +S A ++ LAN Y + I++ ++G+P
Sbjct: 118 Q--EKGEQRPHYLFFENVDRLLSSPAKQRGRDFAIILASLANLGYTIEWRIINAAEYGMP 175
Query: 166 YSRPRYFCLA-------KRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWD 218
R R + + ++K F+ +L + ++ PL + K + +
Sbjct: 176 QRRRRIYIIGYYKGSTIEKKIEDFKNWILFDGVMAKAFPLEQKNKSGSSFK---IEGTIK 232
Query: 219 KLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVP 278
++ ++ + ++ F N+G N + + T T + VD + D+F +P
Sbjct: 233 EVSDNFNVKQKNSPFGNTGIMTNRQVYTIDT-TPVYNGTHMTLGGNIVDESLVPDNFFIP 291
Query: 279 LSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL--------ATVQPKNKGKASS 330
+S I RW +K+ +K Y+Y+ G + + +G S
Sbjct: 292 ISDIARWEYE-----KGAKKIERTSKEGYKYIFSEGGMSFPDVLDRPSRTIITGEGGTSP 346
Query: 331 LKEQHL--------RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLL 382
+ +H+ R P E+ L+ FP + + ++ +R L+GN+L ++ +
Sbjct: 347 SRFKHVIRTPSGRYRRLIPLELERLNMFPDNHTYHPDVNDGRRAFLMGNALVCGIIQRMG 406
Query: 383 QYLF 386
Q L+
Sbjct: 407 QSLY 410
>gi|410625897|ref|ZP_11336667.1| DNA (cytosine-5-)-methyltransferase [Glaciecola mesophila KMM 241]
gi|410154517|dbj|GAC23436.1| DNA (cytosine-5-)-methyltransferase [Glaciecola mesophila KMM 241]
Length = 430
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 20/182 (10%)
Query: 6 CKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNI 65
C N +R ++ ++GIGG+R L V + + + A + Y N G P+ G+I
Sbjct: 92 CDN---KFRFIDLFAGIGGIR--LGAQSNGGICVFSSEFDSFAQNTYSYNHGEHPF-GDI 145
Query: 66 QNLTAAELDMYGAHAWLLSPPCQPYTR----QGLQKQSSDARAFSFLKILELIPHTVKPP 121
+ E ++ L PCQP++ +G + ++ F L+ILE K P
Sbjct: 146 TKIQ--ERNIPDHDVLLAGFPCQPFSYSGRCEGFEDKTRGTLFFDVLRILE-----KKRP 198
Query: 122 HMLFVENVVGFETSDTHAKM---IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
+ENV GF++ + M ++ L + Y IL+ +GVP R R++C+A RK
Sbjct: 199 KFALLENVKGFKSHNKGETMFIALKALEEAGYEPYWTILNSYDYGVPQYRERWYCVAIRK 258
Query: 179 PL 180
L
Sbjct: 259 DL 260
>gi|127471|sp|P24581.1|MTNX_NEILA RecName: Full=Cytosine-specific methyltransferase NlaX;
Short=M.NlaX
gi|45004|emb|CAA38357.1| cytosine-specific methyltransferase of NlaIII [Neisseria lactamica]
Length = 313
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 11/168 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+++++ ++GIGG+R +A + V + +I+ A Y+ N G G+I A+
Sbjct: 2 FKIIDLFAGIGGIRLGFEQAFDDVRCVFSSEIDKYAVQTYQANHGGETVCGDITQTDVAD 61
Query: 73 LDMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ + +LS PCQP+++ GL+K +D R F I ++ K P +ENV
Sbjct: 62 IPDHD----ILSAGFPCQPFSQAGLKKGFADTRGTLFFDIERIL--LAKKPQAFLLENVK 115
Query: 131 GFETSDTHAKMIEILAN---SDYLTQEFILSPLQFGVPYSRPRYFCLA 175
+ D + ILA+ + Y +L FG+P +R R + +
Sbjct: 116 QLKGHDKGRTLQVILAHLQQAGYKVYTEVLKARDFGIPQNRERIYLVG 163
>gi|417844498|ref|ZP_12490540.1| modification methylase EcoRII [Haemophilus haemolyticus M21639]
gi|341956695|gb|EGT83114.1| modification methylase EcoRII [Haemophilus haemolyticus M21639]
Length = 306
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
++++ ++GIGG+R +A + V + +I+ A Y+ NF G+I T +
Sbjct: 4 KIVDLFAGIGGIRLGFEQAFNNVDCVFSSEIDKYAIQTYKTNFKDEFVFGDI---TQIDE 60
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV--- 129
+ H LL+ PCQP+++ GL+K SD R F I ++ K P +ENV
Sbjct: 61 KLVPDHDILLAGFPCQPFSQAGLKKGFSDTRGTLFFDIERILLE--KKPKAFLLENVKQL 118
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
G + +T ++E L + Y +L FG+P +R R + +
Sbjct: 119 KGHDKGNTLKVILEHLEKAGYKVFYDVLRAKDFGIPQNRERIYIVG 164
>gi|432395094|ref|ZP_19637896.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE21]
gi|430912198|gb|ELC33430.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE21]
Length = 415
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 23/220 (10%)
Query: 14 RVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
+ ++ +SG GG+R +A +S + V++ +I+ KA + Y+LNF Y
Sbjct: 3 KFVDLFSGTGGIRLGFEQAMKEIGLSTKCVKSSEIDKKACETYKLNFDEESY------CD 56
Query: 70 AAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
++D+ + LL+ PCQ ++ G Q +D R F ++ +I P + +EN
Sbjct: 57 IHDVDIDESFDVLLAGFPCQAFSYAGKQLGFADTRGTLFFEVERIIKKN--KPKLCLLEN 114
Query: 129 VVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK-RKPLSFRC 184
V G + D T + +++ L + Y + +L+ FGVP +R R + +A +K ++
Sbjct: 115 VRGLTSHDKGRTFSTILKSLHDLGYHVEYRLLNTSNFGVPQNRVRIYIIASLKKEVTLTI 174
Query: 185 -QLLNNQLLRSPSPLLGNDDMTVITK-----HDQPDDSWD 218
L + + P G D +K D PD S+D
Sbjct: 175 PNDLGAKDTHNYKPSKGGHDFYTESKVSDILEDSPDKSYD 214
>gi|308126237|ref|ZP_05908633.2| DNA (cytosine-5-)-methyltransferase [Vibrio parahaemolyticus
AQ4037]
gi|308107574|gb|EFO45114.1| DNA (cytosine-5-)-methyltransferase [Vibrio parahaemolyticus
AQ4037]
Length = 426
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 153/411 (37%), Gaps = 104/411 (25%)
Query: 7 KNDGEA--WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
+ND E+ + ++ ++GIGG+R +V + V +I+ A Y NFG P +G+
Sbjct: 77 RNDNESPEFTFIDLFAGIGGIRLPFQ--EVGGKCVFTSEIDKFAQQTYLANFGEYP-KGD 133
Query: 65 IQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
I ++A+ D+ L PCQ +++ GL++ +D R F +I ++ K P M
Sbjct: 134 ITKISAS--DIPNHDVLLAGFPCQAFSQAGLKRGFNDTRGTMFFEIQRILSE--KRPKMF 189
Query: 125 FVENVVGFETSD--------------THAKMI-----------EILANS-DYLTQEFILS 158
+ENV + D TH + I L+N +Y +L
Sbjct: 190 LLENVKQLKGHDKGRTLDTILGILRGTHEQEIPQDISISEESRNALSNKLNYWVNFKVLR 249
Query: 159 PLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWD 218
FG P +R R + + K + L N + + P P + +P D
Sbjct: 250 AADFGAPQNRERIYLVGFDK--DYFGDLDFNSIFQFPEPTM------------KPTKVGD 295
Query: 219 KLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVP 278
+LE+ D V+ F D A+ + + + F
Sbjct: 296 -ILETSDYVDSF---------------------TISDKIWASHQKRKAGHKNKGNGF--- 330
Query: 279 LSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHL-- 336
+V ++K + YY+ G + + + HL
Sbjct: 331 ---------GFTLVNSETKYTNTISARYYK----------------DGSEALVDQSHLGK 365
Query: 337 --RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
R TPRE A L FP ++ +S Q Y GNS+ + VV L + +
Sbjct: 366 NPRMLTPRECARLQGFPENY-IVDAVSKGQSYKQFGNSVCMNVVKELARNM 415
>gi|397689937|ref|YP_006527191.1| DNA-cytosine methyltransferase [Melioribacter roseus P3M]
gi|395811429|gb|AFN74178.1| DNA-cytosine methyltransferase [Melioribacter roseus P3M]
Length = 322
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 12/176 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
+ ++ + GIGG RY+ +A + + V + DI+ A + Y NFG P G+I +
Sbjct: 4 KYIDLFCGIGGFRYAAEQAFKEYSIKPKCVFSSDIDKYAREAYFANFGEYP-AGDITKID 62
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D+ PCQP++ G +K D R F I ++ + K P +ENV
Sbjct: 63 --ENDIPDHDVLFAGFPCQPFSIIGQKKGFEDTRGTLFFDIARIL--SAKRPKAFVLENV 118
Query: 130 ---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
VG + T ++ +L Y +L+ L +G+P R R + K + F
Sbjct: 119 KMLVGHDKGRTLKTILRVLRELGYYVDYKVLNALDYGLPQKRERVIIIGYYKFILF 174
>gi|420443356|ref|ZP_14942284.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
gi|393060863|gb|EJB61732.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
Length = 309
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 87/177 (49%), Gaps = 14/177 (7%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++A ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQAGF--EIGWANELDKDACNTYRANFKHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLAKRKPLSFRC 184
V +T ++E L N Y IL+ ++ +P +R R + + ++C
Sbjct: 114 LVSHNKGETLKFILETLKNLGYFVHYKILNTYEYSTIPQNRERVYIIGFLDKNHYKC 170
>gi|392596915|gb|EIW86237.1| hypothetical protein CONPUDRAFT_148330 [Coniophora puteana
RWD-64-598 SS2]
Length = 148
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 19/162 (11%)
Query: 14 RVLEFYSGIGGMRYSLMKADV-SAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLTAA 71
+ +EFYSGI G+ +L + + +AQ+++A+D + A VY N G + +I LTA
Sbjct: 2 KCIEFYSGICGLHIALKGSRIPNAQLIKAYDWDQSACQVYTTNHGPSIVSRTDISRLTAG 61
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSS--DARAFSFLKILELIPHTVKPPHMLFVENV 129
EL G WL P G + +S +AR+ K+ P T M F
Sbjct: 62 ELAALGVDIWLALLPVD----HGPESESEPREARSTRGHKV----PFTTS--MMCF---- 107
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRY 171
F S T +++ LA Y T EF L+P+QFG+ S RY
Sbjct: 108 -RFHDSATRTHLVDALARLGYTTAEFFLAPVQFGILNSLLRY 148
>gi|423246650|ref|ZP_17227703.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei CL02T12C06]
gi|392635002|gb|EIY28909.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei CL02T12C06]
Length = 248
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++G+GG +L K + + V A +I + +YE NFG + G+I + +
Sbjct: 5 KFIDLFAGLGGFHLALEK--LGCECVFASEIQPELQSLYERNFGMK-CSGDINEIDITK- 60
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDA--RAFSFLKILELIPHTVKPPHMLFVENVVG 131
D+ PCQP+++ G Q+ D R F KI E++ K P +F+ENV
Sbjct: 61 DIPDHDILCAGFPCQPFSQAGKQQGFDDQKRRGNLFYKIWEIL--ECKKPEFVFLENVPN 118
Query: 132 FETSDTHA--KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
++ D K+I + Y Q+ I+SP FG+P R R + + + K
Sbjct: 119 LKSHDNKNTYKVIYSTLSQLYDIQDDIISPHYFGIPQHRTRIYIVGRLK 167
>gi|224796590|ref|YP_002641667.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 64b]
gi|387828019|ref|YP_005806162.1| DNA-cytosine methyltransferase [Borrelia burgdorferi N40]
gi|223929176|gb|ACN23896.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 64b]
gi|312149869|gb|ADQ29935.1| DNA-cytosine methyltransferase [Borrelia burgdorferi N40]
Length = 324
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 12/169 (7%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ + GIGG R +L K + + V + DI+ A Y+ NFG +PY ++T
Sbjct: 15 FKFIDLFCGIGGFRVALQKQGM--ECVFSCDIDKYAQTAYQKNFGDKPY----GDVTEIP 68
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF--VENV 129
D H L + PCQP++ G + + D R F +I+ + + KP M+ V+N+
Sbjct: 69 EDKIPRHEILCAGFPCQPFSISGKKLGTKDIRGRLFYEIIRIAQYH-KPLVMILENVKNI 127
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPR-YF-CLAK 176
+ + + + + L Y +L+ FGVP +R R YF CL K
Sbjct: 128 MSMDNGEVIKDIRQKLDEIGYNVHINVLNASNFGVPQARERVYFACLRK 176
>gi|406660433|ref|ZP_11068565.1| Modification methylase HpaII [Cecembia lonarensis LW9]
gi|405555818|gb|EKB50824.1| Modification methylase HpaII [Cecembia lonarensis LW9]
Length = 418
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 10/175 (5%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
+++ ++ ++GIGG R ++ + + V + + +++A Y NFG P+ G+I
Sbjct: 94 SFKFIDLFAGIGGFRLAMQ--SLGGKCVFSSEWDEQAKKTYFANFGEVPF-GDITKEETK 150
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ G PCQ ++ G + D R F + E+I K P F+ENV G
Sbjct: 151 QFIPDGFDVLCAGFPCQAFSIAGRRGGFEDTRGTLFFDVAEIIRR--KKPKAFFLENVKG 208
Query: 132 FETSD---THAKMIEILAN--SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
D T A ++ +L ++ + +++ FGVP +R R F + RK L
Sbjct: 209 LVNHDRGRTLATILNVLREDLGYFVPEPKVINAKDFGVPQNRERIFIVGFRKDLG 263
>gi|299536257|ref|ZP_07049570.1| DNA-methyltransferase MKpn2kI [Lysinibacillus fusiformis ZC1]
gi|298728243|gb|EFI68805.1| DNA-methyltransferase MKpn2kI [Lysinibacillus fusiformis ZC1]
Length = 403
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 12/171 (7%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
+++ ++GIGG+R + +D A Y NFG P G+I + E+
Sbjct: 74 MIDLFAGIGGIRLAFQSQGGYCCFTSEWD--KFAAKTYRANFGDEP-NGDITKINEKEIP 130
Query: 75 MYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
H LL+ PCQ +++ GL++ D R F + +I K P +ENV
Sbjct: 131 ---DHNILLAGFPCQAFSQAGLKQGFEDTRGTLFFDVARIIAE--KRPDAFLLENVKNLR 185
Query: 134 TSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
D T K+ E L DY + +L FGVP +R R F + K +
Sbjct: 186 NHDKGRTFTKIKETLEGLDYTFEAKVLRAADFGVPQNRERVFMVGFNKRIG 236
>gi|423232099|ref|ZP_17218501.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei CL02T00C15]
gi|392625163|gb|EIY19234.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei CL02T00C15]
Length = 248
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++G+GG +L K + + V A +I + +YE NFG + G+I + +
Sbjct: 5 KFIDLFAGLGGFHLALEK--LGCECVFASEIQPELQSLYERNFGMK-CSGDINEIDITK- 60
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDA--RAFSFLKILELIPHTVKPPHMLFVENVVG 131
D+ PCQP+++ G Q+ D R F KI E++ K P +F+ENV
Sbjct: 61 DIPDHDILCAGFPCQPFSQAGKQQGFDDQKRRGNLFYKIWEIL--ECKKPEFVFLENVPN 118
Query: 132 FETSDTHA--KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
++ D K+I + Y Q+ I+SP FG+P R R + + + K
Sbjct: 119 LKSHDNKNTYKVIYSTLSQLYDIQDDIISPHYFGIPQHRTRIYIVGRLK 167
>gi|219724141|ref|YP_002477179.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Borrelia
burgdorferi 156a]
gi|225575842|ref|YP_002724642.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 118a]
gi|219693145|gb|ACL34349.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Borrelia
burgdorferi 156a]
gi|225546742|gb|ACN92742.1| DNA-cytosine methyltransferase [Borrelia burgdorferi 118a]
Length = 311
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 12/169 (7%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ + GIGG R +L K + + V + DI+ A Y+ NFG +PY ++T
Sbjct: 2 FKFIDLFCGIGGFRVALQKQGM--ECVFSCDIDKYAQTAYQKNFGDKPY----GDVTEIP 55
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF--VENV 129
D H L + PCQP++ G + + D R F +I+ + + KP M+ V+N+
Sbjct: 56 EDKIPRHEILCAGFPCQPFSISGKKLGTKDIRGRLFYEIIRIAQYH-KPLVMILENVKNI 114
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPR-YF-CLAK 176
+ + + + + L Y +L+ FGVP +R R YF CL K
Sbjct: 115 MSMDNGEVIKDIRQKLDEIGYNVHINVLNASNFGVPQARERVYFACLRK 163
>gi|428312113|ref|YP_007123090.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
gi|428253725|gb|AFZ19684.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
Length = 425
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLTAAELD 74
+E + GIGG R + K ++ + V A DI KA VY FG QGNI L A E+
Sbjct: 43 VELFCGIGGFRIAADKRNI--RTVWANDICPKACKVYRTQFGDAELRQGNINEL-AHEIP 99
Query: 75 MYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF--VENVVG 131
H L + PCQP++ G ++ D R F I++++ H KP + V+ ++
Sbjct: 100 ---PHELLTAGFPCQPFSSAGKKEGVRDPRGNLFEVIVDIL-HRHKPRFFILENVKRLLS 155
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
E AK++ LA+ DY + +++ + FG+P +R R L
Sbjct: 156 MEEGTHFAKILSRLASLDYTIEWRLVNAMHFGLPQNRQRIVILG 199
>gi|404483313|ref|ZP_11018536.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
OBRC5-5]
gi|404343586|gb|EJZ69947.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
OBRC5-5]
Length = 325
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA----NDVYELNFGHRPYQGNIQ 66
E VLE + GIG +R +L++ + +V++ +I+ N +Y +F + G
Sbjct: 12 ETLNVLELFGGIGAIRKALIRQKIPHKVIDYVEIDKNCVKSYNALYNADFKPKSIIGYNP 71
Query: 67 NLTAAELDMYGAHAWLLSPPCQPYTRQGLQ---KQSSDARAFSFLKILELIPHTVKPPHM 123
+ +L M+G+ PCQ ++R GL+ K+ S R+ + + +I P +
Sbjct: 72 SKQRIDLLMHGS-------PCQDFSRAGLKQGGKKGSGTRSSLLFETIRIIEEMNSRPRI 124
Query: 124 LFVENVVGFETSDTHAKMIEILANSDYLTQE---FILSPLQFGVPYSRPRYFCLA 175
+ ENV G + A L + L E IL+ + FG+P R R F ++
Sbjct: 125 VIWENVKGVLDKNLRASFFHYLTEMESLGYENIYAILNAMDFGIPQKRERIFVVS 179
>gi|225691140|gb|ACO06242.1| 5'-methylcytosine methyltransferase M.BbrI [Bifidobacterium breve
UCC2003]
gi|339478470|gb|ABE94925.1| Modification methylase [Bifidobacterium breve UCC2003]
Length = 392
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 42/250 (16%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF----GHRPYQGNIQNLT 69
+ LEF++GIG R L +A QV + DI+ ++Y NF GH +G++ L+
Sbjct: 16 QALEFFAGIGLARLGLEEAGF--QVEWSNDIDAAKCEMYRNNFTDTPGHTLVEGDMSELS 73
Query: 70 AAELDMYGAHAWLLSPPCQPY----TRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
+L + AW S PC TR GL + S A + ++++LE + +T +PP +
Sbjct: 74 GDDLPHDASIAW-GSSPCTDLSLAGTRTGLNGKQSGA-FWQYVRLLEELGNT-RPP-IAV 129
Query: 126 VENVVGFETSDTH---AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS- 181
+ENV G TS + A + Y + +F +P SRPR F + + P +
Sbjct: 130 LENVNGLATSHSGEDLAAAVHAFNELGYSVDVLSIDTRRF-IPQSRPRLFLVGLQNPPAA 188
Query: 182 ----------FRCQLLNNQLLRS--------PSPLLGNDDMTVITKHDQPDDSWD----- 218
+ Q+ + LR+ PSPL+ +M V + D + W+
Sbjct: 189 EQFDSSLRPDWLQQVFADTSLRTHRAPLPEPPSPLMSGLNMYVESMADDDERWWNAERTA 248
Query: 219 KLLESCDPVE 228
K L+S PV+
Sbjct: 249 KFLDSLSPVQ 258
>gi|325857409|ref|ZP_08172464.1| DNA (cytosine-5-)-methyltransferase [Prevotella denticola CRIS
18C-A]
gi|325483119|gb|EGC86099.1| DNA (cytosine-5-)-methyltransferase [Prevotella denticola CRIS
18C-A]
Length = 320
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 7/165 (4%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA-- 71
+V++ + G GG+ +A ++ A+D + A DVY LNF H ++ ++ N A
Sbjct: 2 KVVDLFCGCGGLSLGFQQAGF--DIIAAYDNWEAATDVYRLNFSHPVHKADLMNAARASE 59
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ Y + PPCQ Y+ G + RA ++ E++ T P +ENV
Sbjct: 60 SIMQYSPEMIIGGPPCQDYSSAG-GRNEDGGRAILTVRFAEIV--TAVRPEWFVMENVSS 116
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
+ ++I ++ Y IL+ GVP R R+F + +
Sbjct: 117 IMKYSKVFEAMQIFHDAGYGLSYHILNAALCGVPQRRKRFFMVGR 161
>gi|430377337|ref|ZP_19431470.1| DNA (cytosine-5-)-methyltransferase [Moraxella macacae 0408225]
gi|429540474|gb|ELA08503.1| DNA (cytosine-5-)-methyltransferase [Moraxella macacae 0408225]
Length = 615
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 13/174 (7%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++ ++GIGG +L +D+ A+ V A + + A Y NF ++ N +++ +
Sbjct: 8 VDLFAGIGGFHLAL--SDLGAKCVFASEKDSHARQTYRKNFDTTQFELN-EDIRKIAPEH 64
Query: 76 YGAHAWLLSP-PCQPYTRQGLQKQSSDA----RAFSFLKILELIPHTVKPPHMLFVENV- 129
H L + PCQP+++ GL+K D R F I++++ K P +ENV
Sbjct: 65 IPDHDILCAGFPCQPFSQAGLKKGFQDGADSERGNLFFCIVDILE--AKKPKAFILENVR 122
Query: 130 --VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
V + T+A ++ +L + Y+ Q +L + VP RPR F + +K +S
Sbjct: 123 HLVNHDDGKTYATILTLLDKAGYVVQHQVLKASDYNVPQHRPRVFLVGFKKDIS 176
>gi|338210458|ref|YP_004654507.1| DNA-cytosine methyltransferase [Runella slithyformis DSM 19594]
gi|336304273|gb|AEI47375.1| DNA-cytosine methyltransferase [Runella slithyformis DSM 19594]
Length = 348
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 10/175 (5%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
A+ ++ ++GIGG R +L + Q V + + + +A Y NFG +P+ + T +
Sbjct: 24 AFTFIDLFAGIGGFRMALQS--LGGQCVFSSEWDPQAQKTYAANFGEKPFGDITKEETKS 81
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
++ G PCQ ++ G + D R F + ++I K P +F+ENV G
Sbjct: 82 QIPD-GFDMLCGGFPCQAFSIAGRRGGFEDTRGTLFFDVADIIRR--KKPKAIFLENVKG 138
Query: 132 FETSDTHAKMIEILAN-----SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
D + ILA ++ + +++ FGVP +R R F + R+ L
Sbjct: 139 LINHDKGQTLKTILATLREDLGYFVPEPRVMNAKDFGVPQNRERIFIVGFREDLG 193
>gi|134296266|ref|YP_001120001.1| DNA-cytosine methyltransferase [Burkholderia vietnamiensis G4]
gi|134139423|gb|ABO55166.1| DNA-cytosine methyltransferase [Burkholderia vietnamiensis G4]
Length = 384
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 160/392 (40%), Gaps = 62/392 (15%)
Query: 16 LEFYSGIG----GMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-GNIQNLTA 70
LEF++G G G+R + V A D+++K Y N G R + G+I+N+
Sbjct: 19 LEFFAGSGLVAEGLRGLF-------RPVWANDLSEKKAATYTANHGARHFHLGSIENVEG 71
Query: 71 AEL---DMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHML 124
A L DM A S PCQ + G Q AR+ + +L+ L+ IP +PP +L
Sbjct: 72 AVLPVADMTWA-----SFPCQDLSLAGKQAGIHAARSGLVWQWLRALDEIPE--RPP-VL 123
Query: 125 FVENVVGFETS---DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
ENVVG ++ + + ++ L YL L ++ +P SRPR F +A R+ L
Sbjct: 124 VAENVVGLVSAHGGEGYLQLHAALRERGYLVGAMKLDAARW-LPQSRPRIFVVAYRESLP 182
Query: 182 FRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVN 241
+L+N+ + L ++ + D W +P R ++ DQ +
Sbjct: 183 LPAELVNDGPGWAHDTALRRVRESLESASPAGSDGW-VWWALPEPPARAARLASVLDQ-S 240
Query: 242 TETGFLSTGTAAVDDFGAAEETVEVD--RCVSIDHFLVPLSLIERWGSAMDIVYPDSKRC 299
+ + A+ A E+ D R + + P R G + + D
Sbjct: 241 AKWSAVDAPPKALALIAPAHESQLRDEARQATSGVAVAPGYRRTRPGGQVVELRFDGLAG 300
Query: 300 CCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHH 359
C T KG S VQ + G+A R+ TPRE A L P
Sbjct: 301 CLRTP------KGGSSRQLLVQSTDGGEA----PLQCRWLTPREAARLMGAP-------- 342
Query: 360 LSLRQRYALLGN------SLSIAVVAPLLQYL 385
+RYAL G+ ++ AV AP+ ++L
Sbjct: 343 ----ERYALAGSATDAYAAMGDAVAAPVARWL 370
>gi|462657|sp|P34877.1|MTSA_LACLC RecName: Full=Modification methylase ScrFIA; Short=M.ScrFI-A;
Short=M.ScrFIA; AltName: Full=Cytosine-specific
methyltransferase ScrFIA
gi|149493|gb|AAA25220.1| SCRFI methylase [Lactococcus lactis]
gi|2327034|gb|AAB66696.1| 5-methyl-cytosine methyltransferase [Lactococcus lactis subsp.
cremoris]
Length = 389
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+++++ ++GIGG R + + V + +I+ A Y+ NFG P+ G+I + E
Sbjct: 79 YKMIDLFAGIGGTRLGFHQTEKVKSVFSS-EIDKFAIKTYKANFGDEPH-GDITKID--E 134
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
D+ + PCQ +++ G + D R F +I +I K P +ENV
Sbjct: 135 KDIPDHDILVGGFPCQAFSQAGKKLGFDDTRGTLFFEIARIIKE--KRPKAFLLENVKNL 192
Query: 133 ETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA-KRKPLSFRCQLLN 188
+T D T ++ L DY + FG+P +R R + + RK +S N
Sbjct: 193 KTHDKGRTFKTILNTLEELDYEVHTALFKARDFGLPQNRERIYIVGFDRKSIS------N 246
Query: 189 NQLLRSPSPL-----LGNDDMTVI-TKHDQPDDSWD 218
+ P+PL +GN +V+ K+ D WD
Sbjct: 247 YSDFQMPTPLQEKTRVGNILESVVDDKYTISDKLWD 282
>gi|419808401|ref|ZP_14333305.1| Type II restriction modification system C5-cytosine and N4-cytosine
or N6-adenine DNAmethyltransferase [Mycoplasma
agalactiae 14628]
gi|390605804|gb|EIN15177.1| Type II restriction modification system C5-cytosine and N4-cytosine
or N6-adenine DNAmethyltransferase [Mycoplasma
agalactiae 14628]
Length = 593
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 18/178 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQNLTAA 71
+R+L+ +SG GG Y L + ++ A D N+ A + ++ N G+I
Sbjct: 4 FRILDLFSGAGGFSYGLDSLNEFETLI-ATDFNESALNTFKRNIPKAETILGDITKREVK 62
Query: 72 ELDMYGAHAWLLS-----PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
E + A+ ++ PPCQ ++ +G +K D R F FL+ L+++ P + +
Sbjct: 63 EQIINKANELKINMIIGGPPCQGFSNKGKKKGLDDPRNFLFLEYLDIVEKV--SPELFII 120
Query: 127 ENVVGFETS------DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
ENV T+ D K IE++ Y +L+ FG+P SRPR +A ++
Sbjct: 121 ENVKTMLTAVKGYFIDQIVKKIELMG---YKISYGVLNAKDFGIPQSRPRAIIIAHKE 175
>gi|355575378|ref|ZP_09044916.1| hypothetical protein HMPREF1008_00893 [Olsenella sp. oral taxon 809
str. F0356]
gi|354817688|gb|EHF02187.1| hypothetical protein HMPREF1008_00893 [Olsenella sp. oral taxon 809
str. F0356]
Length = 315
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 18/197 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKA--DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL--T 69
R ++ ++G GGM A DVSA AF+ A DVY NF H + ++ + +
Sbjct: 11 RAVDLFAGCGGMSRGFENAGYDVSA----AFEFWKPAIDVYRANFSHTVVEQDLSKVDES 66
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
++ YG + PPCQ ++ G Q ++ R + L + P +ENV
Sbjct: 67 VEKIRTYGPDIIIGGPPCQDFSTAGYQDET---RGRAILSVCYARIVIAVMPRYFVMENV 123
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 189
+++ K+I + Y + +L+ GVP +R R F + + LS L+
Sbjct: 124 ATIRNTESFRKVIVTFKEAGYGLTQKVLNAAYCGVPQTRKRMFVVGE---LSGEDDFLDE 180
Query: 190 QLLRSPSPLLGNDDMTV 206
+L R+ L + MT+
Sbjct: 181 ELERN----LADKPMTI 193
>gi|414073385|ref|YP_006998602.1| Modification methylase ScrFIA [Lactococcus lactis subsp. cremoris
UC509.9]
gi|413973305|gb|AFW90769.1| Modification methylase ScrFIA [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 375
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+++++ ++GIGG R + + V + +I+ A Y+ NFG P+ G+I + E
Sbjct: 65 YKMIDLFAGIGGTRLGFHQTEKVKSVFSS-EIDKFAIKTYKANFGDEPH-GDITKID--E 120
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
D+ + PCQ +++ G + D R F +I +I K P +ENV
Sbjct: 121 KDIPDHDILVGGFPCQAFSQAGKKLGFDDTRGTLFFEIARIIKE--KRPKAFLLENVKNL 178
Query: 133 ETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA-KRKPLSFRCQLLN 188
+T D T ++ L DY + FG+P +R R + + RK +S N
Sbjct: 179 KTHDKGRTFKTILNTLEELDYEVHTALFKARDFGLPQNRERIYIVGFDRKSIS------N 232
Query: 189 NQLLRSPSPL-----LGNDDMTVI-TKHDQPDDSWD 218
+ P+PL +GN +V+ K+ D WD
Sbjct: 233 YSDFQMPTPLQEKTRVGNILESVVDDKYTISDKLWD 268
>gi|421654595|ref|ZP_16094922.1| putative modification methylase HaeIII [Acinetobacter baumannii
Naval-72]
gi|408510366|gb|EKK12028.1| putative modification methylase HaeIII [Acinetobacter baumannii
Naval-72]
Length = 309
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL---TA 70
+V+ +SG GG+ + A +VV A D ++ A Y N G GNI ++ T
Sbjct: 2 KVVSLFSGAGGLDLGFINAGF--EVVWANDFDEDACKTYAHNIGEHIVHGNISSIFSDTI 59
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
E D+ + PCQ +++ L++ + D R +L+ L ++ T K P ENV
Sbjct: 60 PECDVV-----IGGFPCQGFSQANLKRSNDDDRNQLYLEFLRIV--TDKKPKYFVAENVR 112
Query: 131 G---FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
G + + K+I+ N+ Y Q + + +GVP +R R + R L+
Sbjct: 113 GILSLDGGNAIKKIIDDFKNAGYRIQYQLFNTADYGVPQTRYRVIIIGIRNDLN 166
>gi|428301089|ref|YP_007139395.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
gi|428237633|gb|AFZ03423.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
Length = 326
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 83/171 (48%), Gaps = 19/171 (11%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA--- 70
+V++ ++G GG+ SL + ++V AF+ + A +VY+ NF H Y ++ NL
Sbjct: 13 KVIDLFAGCGGL--SLGFQNAGFKIVGAFENWNPAIEVYKKNFSHPIYNYDLSNLKGDDK 70
Query: 71 ----AELDMYGAHAWLLSPPCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLF 125
+ DM + PPCQ ++ G K++ D R + E++ P
Sbjct: 71 LFQNIDFDMI-----IGGPPCQDFSSAG--KRNEDLGRGDLSISFAEIV--ISNRPKWFL 121
Query: 126 VENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
+ENV G++ + +++++ + + Y E I+ GVP +R RY C+ K
Sbjct: 122 MENVEGYKKTQKYSQIVNMFRANSYGLTETIIKASLCGVPQNRKRYICIGK 172
>gi|386752365|ref|YP_006225584.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi169]
gi|386753903|ref|YP_006227121.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi112]
gi|384558623|gb|AFH99090.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi169]
gi|384560161|gb|AFI00628.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi112]
Length = 309
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++A ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQAGF--EIGWANELDKDACNTYRANFKHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V +T ++E L N Y IL+ ++ VP +R R + +
Sbjct: 114 LVSHNKGETLKFILETLKNLGYFVHYKILNTYEYSTVPQNRERIYIIG 161
>gi|410609536|ref|YP_006953590.1| type II DNA methyltransferase M.EcoO34I [Escherichia coli]
gi|417126105|ref|ZP_11973900.1| putative modification methylase HaeIII [Escherichia coli 97.0246]
gi|420091914|ref|ZP_14603644.1| putative site-specific DNA-methyltransferase [Escherichia coli
O111:H8 str. CVM9602]
gi|420119027|ref|ZP_14628334.1| putative site-specific DNA-methyltransferase [Escherichia coli
O26:H11 str. CVM10030]
gi|424747487|ref|ZP_18175667.1| putative site-specific DNA-methyltransferase [Escherichia coli
O26:H11 str. CFSAN001629]
gi|425376183|ref|ZP_18760775.1| cytosine-specific methyltransferase [Escherichia coli EC1865]
gi|355469723|gb|AER93372.1| type II DNA methyltransferase M.EcoO34I [Escherichia coli]
gi|386145375|gb|EIG91834.1| putative modification methylase HaeIII [Escherichia coli 97.0246]
gi|394381647|gb|EJE59324.1| putative site-specific DNA-methyltransferase [Escherichia coli
O111:H8 str. CVM9602]
gi|394432251|gb|EJF04359.1| putative site-specific DNA-methyltransferase [Escherichia coli
O26:H11 str. CVM10030]
gi|408313887|gb|EKJ30394.1| cytosine-specific methyltransferase [Escherichia coli EC1865]
gi|421946117|gb|EKU03269.1| putative site-specific DNA-methyltransferase [Escherichia coli
O26:H11 str. CFSAN001629]
Length = 385
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 17/196 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL--TAA 71
R+++ +SG GG+ +K VV A+D D A + Y NF H + ++ N+
Sbjct: 2 RIIDLFSGCGGLSLGFLKG--GFDVVGAYDFWDPAIECYRDNFSHPIKKLDLSNVDDVVR 59
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDAR-AFSFLKILELIPHTVKPPHMLFVENVV 130
EL + PPCQ ++ GL+ + + A SF +I++ I P +ENV
Sbjct: 60 ELKDIDFDMIIGGPPCQDFSHAGLRIEGARANLTRSFSEIIKRIK-----PKWFVMENVD 114
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 190
S + + I S Y E +L + GVP R R F + K L R + N+
Sbjct: 115 RALRSGAYLEARGIFKESGYGLTEIVLDASKCGVPQKRKRLFVIGK---LDVRDGFILNE 171
Query: 191 LLRSPSPLLGNDDMTV 206
++ S D MTV
Sbjct: 172 VMCGIS----KDSMTV 183
>gi|172039424|ref|YP_001805925.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC
51142]
gi|354552311|ref|ZP_08971619.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
gi|171700878|gb|ACB53859.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC
51142]
gi|353555633|gb|EHC25021.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
Length = 729
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 14/170 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL-- 68
+ + ++ ++GIGG R + KA V + +IND VY NFG P Q + +
Sbjct: 4 KTLKFIDLFAGIGGFRLAFEKA--GYHCVYSCEINDHCRQVYYDNFGELPDQDITKIIPK 61
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
+ D+ A PCQP++ G ++ D R F I E+I VK P ++ +EN
Sbjct: 62 NIPDFDILTA-----GFPCQPFSICGKREGFKDTRGTLFFHICEII--EVKKPKVIVLEN 114
Query: 129 V---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
V + + T +I L + YL +L+ FGVP +R R +
Sbjct: 115 VKHLIHHQQGKTLETIIYALEDLGYLVDYKLLNAKDFGVPQNRERIIIIG 164
>gi|433448430|ref|ZP_20411362.1| DNA methylase [Weissella ceti NC36]
gi|429539901|gb|ELA07935.1| DNA methylase [Weissella ceti NC36]
Length = 306
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 143/377 (37%), Gaps = 90/377 (23%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
E + ++ ++GIGG+R D + V + + + A YE N+G P QG+I + A
Sbjct: 3 EKLKFIDLFAGIGGIRQGF--EDENTVGVFSSEWDKFAQKTYEANYGEVP-QGDITQIDA 59
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVEN 128
++ H LL+ PCQP++ G ++ A + F +L +I H P M +EN
Sbjct: 60 NDIP---DHDVLLAGFPCQPFSSIGKREGFMHATQGTLFFDVLRIINH--HQPKMFLLEN 114
Query: 129 VVGFETSDTHAKMIEILANSD---YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
V G T D M ILA+ D Y +L FG+P R R + K L+
Sbjct: 115 VQGLLTHDKGNTMKVILASLDEAGYDVSYKVLDAQNFGLPQVRKRVMIVGFHKDLN---- 170
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
IT D P+ K+ PV LE + G
Sbjct: 171 ---------------------ITNFDIPEGDNKKV-----PVGSILESNPDG-------- 196
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSK-RCCCFTK 304
SI + L L ++ I+ +S +
Sbjct: 197 ------------------------YSISNRLQESYLFKKDDGRPQIIDKESDIQVKTLVA 232
Query: 305 SYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQ 364
SY++ + TG+ + KG E +R + EV + FP DF P +S Q
Sbjct: 233 SYHKIQRLTGTFV-------KG-----GETGIRLLSQLEVKRIMGFPDDFVVP--VSRTQ 278
Query: 365 RYALLGNSLSIAVVAPL 381
Y GNS+++ ++ +
Sbjct: 279 MYRQFGNSVAVPMIKAV 295
>gi|430377053|ref|ZP_19431186.1| hypothetical protein MOMA_06646 [Moraxella macacae 0408225]
gi|429540190|gb|ELA08219.1| hypothetical protein MOMA_06646 [Moraxella macacae 0408225]
Length = 335
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+ ++ ++GIGG+R + + V A + + A Y N+G P+ G+I + +
Sbjct: 21 KAIDLFAGIGGIRLGFEQVFKHQIEFVFASEFDKFAQQTYYANYGELPH-GDITQIDVKD 79
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H +L+ PCQ ++ GL+K D R F + + H P ++F+ENV G
Sbjct: 80 IPH---HDIILAGFPCQAFSVAGLRKGFEDTRGTLFFDVARIAKH--HRPKLIFLENVKG 134
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
F+ D T + L + Y IL+ FG+P +R R + +A
Sbjct: 135 FKNHDKGNTFKVVKRTLEDLGYRVYADILNAKNFGIPQNRERIYIIA 181
>gi|385248901|ref|YP_005777120.1| DNA-cytosine methyltransferase [Helicobacter pylori F57]
gi|317181696|dbj|BAJ59480.1| DNA-cytosine methyltransferase [Helicobacter pylori F57]
Length = 309
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++A ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQAGF--EIGWANELDKDACNTYRANFKHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIIMEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V +T ++E L N Y IL+ ++ +P +R R + +
Sbjct: 114 LVSHNKGETLKFILETLKNLGYFVHYKILNTYEYSTIPQNRERIYIIG 161
>gi|420441721|ref|ZP_14940666.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-36]
gi|393059850|gb|EJB60725.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-36]
Length = 309
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++A ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQAGF--EIGWANELDKDACNTYRANFKHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V +T ++E L N Y IL+ ++ +P +R R + +
Sbjct: 114 LVSHNKGETLKFILETLKNLGYFVHYKILNTYEYSTIPQNRERIYIIG 161
>gi|419264366|ref|ZP_13806760.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC10C]
gi|378120434|gb|EHW81908.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC10C]
Length = 297
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 17/196 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL--TAA 71
R+++ +SG GG+ +K VV A+D D A + Y NF H + ++ N+
Sbjct: 2 RIIDLFSGCGGLSLGFLKG--GFDVVGAYDFWDPAIECYRDNFSHPIKKLDLSNVDDVVR 59
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDAR-AFSFLKILELIPHTVKPPHMLFVENVV 130
EL + PPCQ ++ GL+ + + A SF +I++ I P +ENV
Sbjct: 60 ELKDIDFDMIIGGPPCQDFSHAGLRIEGARANLTRSFSEIIKRIK-----PKWFVMENVD 114
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 190
S + + I S Y E +L + GVP R R F + K L R + N+
Sbjct: 115 RALRSGAYLEARGIFKESGYGLTEIVLDASKCGVPQKRKRLFVIGK---LDVRDGFILNE 171
Query: 191 LLRSPSPLLGNDDMTV 206
++ S D MTV
Sbjct: 172 VMCGIS----KDSMTV 183
>gi|209554428|ref|YP_002284952.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|209541929|gb|ACI60158.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
Length = 319
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-PYQGNIQNLTAAE 72
+V ++GIGG+ Y +A A++V A +I+ A Y NFG +G+I+N+ +
Sbjct: 5 KVASLFAGIGGICYGFKQA--GAKIVWANEIDRDACKTYRYNFGDSYLVEGDIKNIGPND 62
Query: 73 L-DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ D+ + PCQ ++ G QK +D R F +I+ +I VK P + +ENV
Sbjct: 63 IPDIDILNGGF---PCQAFSIAGYQKGFNDERGNLFFEIVRII--KVKKPRAILLENVKN 117
Query: 132 FETSDTHAKMIEILANS----DYLTQEFILSPLQFG-VPYSRPRYFCLA 175
ET D + +++ N Y +L+ + +G VP +R R + +
Sbjct: 118 LETHD-NGNTFKVIKNELEKLGYHVHHKVLNTMDYGNVPQNRERIYIVG 165
>gi|421720038|ref|ZP_16159322.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
gi|407221361|gb|EKE91166.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
Length = 309
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++A ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQAGF--EIGWANELDKDACNTYRANFKHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V +T ++E L N Y IL+ ++ +P +R R + +
Sbjct: 114 LVSHNKGETLKFILETLKNLGYFVHYKILNTYEYSTIPQNRERVYIIG 161
>gi|157737722|ref|YP_001490405.1| DNA (cytosine-5-)-methyltransferase [Arcobacter butzleri RM4018]
gi|157699576|gb|ABV67736.1| DNA (Cytosine-5-)-methyltransferase [Arcobacter butzleri RM4018]
Length = 326
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 9/167 (5%)
Query: 13 WRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
++ ++ ++GIGG+R K ++ V A +++ A Y N+ +PY G+I +
Sbjct: 20 YKFIDLFAGIGGIRTGFEKVFKEESEFVFASELDKYAQIAYFENYNEKPY-GDITKIK-- 76
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
E D+ L PCQ ++ G +K D R F + ++ P ++F+ENV G
Sbjct: 77 EEDIPNHDIILAGFPCQAFSIAGHRKGFDDIRGTLFFDVARIV--NKHKPQVVFLENVKG 134
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
F+ D T + L + Y +L+ FGVP +R R + +A
Sbjct: 135 FKNHDKGNTFNTVKSTLEDMGYRVFAEVLNARNFGVPQNRERIYIIA 181
>gi|253827583|ref|ZP_04870468.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313141791|ref|ZP_07803984.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis
MIT 98-5491]
gi|253510989|gb|EES89648.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313130822|gb|EFR48439.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis
MIT 98-5491]
Length = 589
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 21/184 (11%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG----------HRPYQ 62
+R+L+ + G GG Y L + + + + V D A D + NF ++ +
Sbjct: 2 YRILDLFCGAGGFSYGL-EQNKNFKTVIGLDFEKAAIDTFNHNFKQAIGICGDITNKEVK 60
Query: 63 GNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH 122
+ NL A EL + + + PPCQ ++ +G +D R F FL+ LEL+ P
Sbjct: 61 DKVVNL-AKELKV---NMVIGGPPCQGFSLKGKNLGLADERNFLFLEYLELVEKV--NPE 114
Query: 123 MLFVENVVGFETSDT---HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA-KRK 178
+ +ENV + ++I+ + N Y+ IL+ +GVP +R R F +A K +
Sbjct: 115 IFIIENVKNLYNAVNGYFREEIIKKIKNMGYVVNCKILNAKHYGVPQNRERVFFIAHKER 174
Query: 179 PLSF 182
LSF
Sbjct: 175 LLSF 178
>gi|325269501|ref|ZP_08136117.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM
16608]
gi|324988120|gb|EGC20087.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM
16608]
Length = 388
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 158/386 (40%), Gaps = 55/386 (14%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF--GHRPYQGNIQNLTA- 70
R+ +SGIG + ++ + +++ ++V A DI+ Y N+ + +IQNL A
Sbjct: 34 RLATSFSGIGAIEHAFKRLNLNVEIVFAGDIDANCKKAYFANYKISEEQWHTDIQNLDAR 93
Query: 71 ---AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
++D++ A PCQ ++ G Q+ D R F + ++ P + E
Sbjct: 94 PYKGKVDLFVGGA-----PCQAFSIVGDQRGFDDTRGTLFREFARVVKEC--QPKVFIFE 146
Query: 128 NVVGFETSDTHAKMIEILANS--DYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSF 182
NV G D + E++ N+ DY + +L+ +G+P +R R +C+ +K F
Sbjct: 147 NVQGLFKHD-QGRTWEVIYNTFKDYCGYDVHYQLLNARDYGIPQTRERLYCVGFKKKTKF 205
Query: 183 RCQLLNNQLLRSPSPLLGN--DDMTVITKHDQ-PDDSWDKLLESCDPVERFLEFSNSGDQ 239
+ +P PL D + T + D K+L S + + + ++ ++
Sbjct: 206 K--------YPAPIPLRYKMYDFLEDYTNSEYFEKDKGVKVLTSNEEHRQAIIGGSASER 257
Query: 240 VNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRC 299
N F+ D + +++ + C F P+ + +DI P
Sbjct: 258 FND---FIFPVREIDDKYYLSKKVAKYVLCPGTKTFKTPIK------TDLDIARP----- 303
Query: 300 CCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHH 359
+S ++ + T + K+KG LR TPRE L F DF+
Sbjct: 304 --LLQSMHKMHRAGVDNYVTYK-KDKGVNG------LRKLTPRECLRLMGFKDDFKIA-- 352
Query: 360 LSLRQRYALLGNSLSIAVVAPLLQYL 385
+S Y GNS+ + V+ LL+ +
Sbjct: 353 VSNTSAYMEAGNSIVVDVLIALLKQM 378
>gi|195867949|ref|ZP_03079946.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar
9 str. ATCC 33175]
gi|195660345|gb|EDX53605.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar
9 str. ATCC 33175]
Length = 319
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-PYQGNIQNLTAAE 72
+V ++GIGG+ Y +A A++V A +I+ A Y NFG +G+I+N+ +
Sbjct: 5 KVASLFAGIGGICYGFKQA--GAKIVWANEIDRDACKTYRYNFGDSYLVEGDIKNIGPND 62
Query: 73 L-DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ D+ + PCQ ++ G QK +D R F +I+ +I VK P + +ENV
Sbjct: 63 IPDIDILNGGF---PCQAFSIAGYQKGFNDERGNLFFEIVRII--KVKKPRAILLENVKN 117
Query: 132 FETSDTHAKMIEILANS----DYLTQEFILSPLQFG-VPYSRPRYFCLA 175
ET D + +++ N Y +L+ + +G VP +R R + +
Sbjct: 118 LETHD-NGNTFKVIKNELEKLGYHVHHKVLNTMDYGNVPQNRERIYIVG 165
>gi|421709752|ref|ZP_16149111.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R018c]
gi|421723005|ref|ZP_16162262.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R056a]
gi|407211197|gb|EKE81066.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R018c]
gi|407225373|gb|EKE95144.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R056a]
Length = 309
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++A ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQAGF--EIGWANELDKDACNTYRANFKHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V +T ++E L N Y IL+ ++ +P +R R + +
Sbjct: 114 LVSHNKGETLKFILETLKNLGYFVHYKILNTYEYSTIPQNRERVYIIG 161
>gi|171920707|ref|ZP_02931926.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|185179015|ref|ZP_02964765.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|188024024|ref|ZP_02996783.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|188518336|ref|ZP_03003849.1| cytosine-specific methyltransferase NlaX [Ureaplasma urealyticum
serovar 11 str. ATCC 33695]
gi|188524309|ref|ZP_03004347.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar
12 str. ATCC 33696]
gi|198273488|ref|ZP_03206024.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar
4 str. ATCC 27816]
gi|225550923|ref|ZP_03771872.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar
2 str. ATCC 27814]
gi|225551062|ref|ZP_03772008.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar
8 str. ATCC 27618]
gi|171903447|gb|EDT49736.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|184209104|gb|EDU06147.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|188019052|gb|EDU57092.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|188997975|gb|EDU67072.1| cytosine-specific methyltransferase NlaX [Ureaplasma urealyticum
serovar 11 str. ATCC 33695]
gi|195660089|gb|EDX53469.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar
12 str. ATCC 33696]
gi|198250008|gb|EDY74788.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar
4 str. ATCC 27816]
gi|225378877|gb|EEH01242.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar
8 str. ATCC 27618]
gi|225380077|gb|EEH02439.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar
2 str. ATCC 27814]
Length = 319
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-PYQGNIQNLTAAE 72
+V ++GIGG+ Y +A A++V A +I+ A Y NFG +G+I+N+ +
Sbjct: 5 KVASLFAGIGGICYGFKQA--GAKIVWANEIDRDACKTYRYNFGDSYLVEGDIKNIGPND 62
Query: 73 L-DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ D+ + PCQ ++ G QK +D R F +I+ +I VK P + +ENV
Sbjct: 63 IPDIDILNGGF---PCQAFSIAGYQKGFNDERGNLFFEIVRII--KVKKPRAILLENVKN 117
Query: 132 FETSDTHAKMIEILANS----DYLTQEFILSPLQFG-VPYSRPRYFCLA 175
ET D + +++ N Y +L+ + +G VP +R R + +
Sbjct: 118 LETHD-NGNTFKVIKNELEKLGYHVHHKVLNTMDYGNVPQNRERIYIVG 165
>gi|420463346|ref|ZP_14962124.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
gi|393080874|gb|EJB81599.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
Length = 309
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++A ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQAGF--EIGWANELDKDACNTYRANFKHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V +T ++E L N Y IL+ ++ +P +R R + +
Sbjct: 114 LVSHNKGETLKFILETLKNLGYFVHYKILNTYEYSTIPQNRERVYIIG 161
>gi|420501190|ref|ZP_14999734.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
gi|393149996|gb|EJC50304.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
Length = 309
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++A ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQAGF--EIGWANELDKDACNTYRANFKHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V +T ++E L N Y IL+ ++ +P +R R + +
Sbjct: 114 LVSHNKGETLKFILETLKNLGYFVHYKILNTYEYSTIPQNRERVYIIG 161
>gi|420461645|ref|ZP_14960435.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
gi|393081625|gb|EJB82345.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
Length = 309
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++A ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQAGF--EIGWANELDKDACNTYRANFKHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V +T ++E L N Y IL+ ++ +P +R R + +
Sbjct: 114 LVSHNKGETLKFILETLKNLGYFVHYKILNTYEYSTIPQNRERVYIIG 161
>gi|385229664|ref|YP_005789580.1| DNA-cytosine methyltransferase [Helicobacter pylori Puno135]
gi|344336102|gb|AEN18063.1| DNA-cytosine methyltransferase [Helicobacter pylori Puno135]
Length = 309
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++A ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQAGF--EIGWANELDKDACNTYRANFKHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V +T ++E L N Y IL+ ++ +P +R R + +
Sbjct: 114 LVSHNKGETLKFILETLKNLGYFVHYKILNTYEYSTIPQNRERVYIIG 161
>gi|319956919|ref|YP_004168182.1| DNA-cytosine methyltransferase [Nitratifractor salsuginis DSM
16511]
gi|319419323|gb|ADV46433.1| DNA-cytosine methyltransferase [Nitratifractor salsuginis DSM
16511]
Length = 394
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 155/416 (37%), Gaps = 71/416 (17%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
++ +SGIG + S ++V + +I+ A Y +G P ++ N+ A
Sbjct: 2 KIATLFSGIGAPEMAARHIFPSHEIVFSCEIDKFARKSYAAIYGEEPLYHDVHNVPAI-- 59
Query: 74 DMYGAHAWLL--SPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVEN 128
Y H LL PCQ ++ G++K +D R + F ++++ +P LF EN
Sbjct: 60 -FYQGHIDLLVGGSPCQSFSVAGIRKGVNDPRGALIYQFYRVVD----EARPKVFLF-EN 113
Query: 129 VVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA-KRKPLSFRC 184
V GF + D T + Y +L+ +G+P +R RYF + K K R
Sbjct: 114 VKGFRSIDKGQTREEFERAFRLLGYTVHSAVLNTKHYGLPQNRERYFLVGFKSKTAGERF 173
Query: 185 QLLNNQLLRSP-SPLLGN--DDMTVIT-------KHDQPDD--SWDKLLESCDPVERFLE 232
+ L+ S +L N D+ +T D D +WDK L D ++
Sbjct: 174 RFPKKVPLKLILSDVLENKVDEKYYLTDKALEYMNRDTGDGRTNWDKGLH-YDTAKKI-- 230
Query: 233 FSNSGDQVNTETGF---------LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLS-LI 282
S N G + T++ +H + P +I
Sbjct: 231 --GSAVPANMHKGLPYAVLLQRPRGKNAGGLKALDGVCPTLDSSYFEHNNHIVEPGEPMI 288
Query: 283 ERW-----GSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLR 337
ERW GS +D + P K ++ + + K H+R
Sbjct: 289 ERWANSKIGSVLDTIAPTIKANSMYSDI-------------------RNRPRIHKNGHIR 329
Query: 338 YFTPREVANLHSFPG---DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQAG 390
TP+E L FP D +S QRY GNS+S+ V+ L + + G
Sbjct: 330 KITPKECWRLQGFPDWAHDSAKDAGVSDTQRYKQAGNSMSVPVIEALFRSIAIATG 385
>gi|421711360|ref|ZP_16150703.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
gi|407212509|gb|EKE82371.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
Length = 309
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++A ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQAGF--EIGWANELDKDACNTYRANFKHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V +T ++E L N Y IL+ ++ +P +R R + +
Sbjct: 114 LVSHNKGETLKFILETLKNLGYFVHYKILNTYEYSTIPQNRERIYIIG 161
>gi|167854713|ref|ZP_02477492.1| cell division protein MukB [Haemophilus parasuis 29755]
gi|167854127|gb|EDS25362.1| cell division protein MukB [Haemophilus parasuis 29755]
Length = 361
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 20/179 (11%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNI-----QN 67
+ ++ ++GIGG R ++ K + V + +I++ A Y NFG +PY G+I +
Sbjct: 37 FTFIDLFAGIGGFRLAMEK--LGGYCVFSSEIDENAQKTYATNFGEKPY-GDITLEETKR 93
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
L D+ A PCQ ++ G + D R F ++ E+I P F+E
Sbjct: 94 LIPTTFDILCA-----GFPCQAFSIAGKRGGFEDTRGTLFFEVAEIIRR--HQPKAFFLE 146
Query: 128 NVVGFETSDTHAKMIEIL----ANSDYLTQE-FILSPLQFGVPYSRPRYFCLAKRKPLS 181
NV G + D + IL + +Y + IL+ FGVP +R R F + R+ L+
Sbjct: 147 NVKGLSSHDKGRTLSTILNVLREDLNYFVPDPKILNAKDFGVPQNRERIFIVGFRQDLA 205
>gi|420449869|ref|ZP_14948735.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
gi|393069186|gb|EJB69984.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
Length = 309
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++A ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQAGF--EIGWANELDKDACNTYRANFKHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V +T ++E L N Y IL+ ++ +P +R R + +
Sbjct: 114 LVSHNKGETLKFILETLKNLGYFVHYKILNTYEYSTIPQNRERVYIIG 161
>gi|56461628|ref|YP_156909.1| DNA cytosine methylase [Idiomarina loihiensis L2TR]
gi|56180638|gb|AAV83360.1| DNA cytosine methylase [Idiomarina loihiensis L2TR]
Length = 419
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 19/170 (11%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++G+GG+R + KA A V + +I+ A Y N G PY G+I + A
Sbjct: 100 KFIDLFAGVGGIRLAFEKA--GAACVFSSEIDTHAQLTYFTNHGTVPY-GDITKIDA--- 153
Query: 74 DMYGAHAWLLSP-PCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
D +H L + PCQP++ R+G + + ++I E K P +LF+EN
Sbjct: 154 DSIPSHDILCAGFPCQPFSHIGRREGFKHPTQGTMFHEIVRIAE-----KKRPRVLFLEN 208
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
V G + +T +++ L Y IL+ FGVP +R R++ +A
Sbjct: 209 VPGIVNHDNGNTLKVILDTLTELGYECNHTILNASDFGVPQNRKRFYLVA 258
>gi|420416566|ref|ZP_14915675.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393036995|gb|EJB38033.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 309
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++A ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQAGF--EIGWANELDKDACNTYRANFKHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V +T ++E L N Y IL+ ++ +P +R R + +
Sbjct: 114 LVSHNKGETLKFILETLKNLGYFVHYKILNTYEYSTIPQNRERIYIIG 161
>gi|385220188|ref|YP_005781660.1| DNA-cytosine methyltransferase [Helicobacter pylori India7]
gi|317008995|gb|ADU79575.1| DNA-cytosine methyltransferase [Helicobacter pylori India7]
Length = 309
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++A ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQAGF--EIGWANELDKDACNTYRANFKHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V +T ++E L N Y IL+ ++ +P +R R + +
Sbjct: 114 LVSHNKGETLKFILETLKNLGYFVHYKILNTYEYSTIPQNRERIYIIG 161
>gi|384892407|ref|YP_005766500.1| DNA-cytosine methyltransferase [Helicobacter pylori Cuz20]
gi|384893960|ref|YP_005768009.1| DNA-cytosine methyltransferase [Helicobacter pylori Sat464]
gi|385216220|ref|YP_005776177.1| DNA-cytosine methyltransferase [Helicobacter pylori F32]
gi|386750781|ref|YP_006224001.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi417]
gi|425788977|ref|YP_007016897.1| DNA-cytosine methyltransferase [Helicobacter pylori Aklavik117]
gi|308061704|gb|ADO03592.1| DNA-cytosine methyltransferase [Helicobacter pylori Cuz20]
gi|308063214|gb|ADO05101.1| DNA-cytosine methyltransferase [Helicobacter pylori Sat464]
gi|317180749|dbj|BAJ58535.1| DNA-cytosine methyltransferase [Helicobacter pylori F32]
gi|384557039|gb|AFH97507.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi417]
gi|425627292|gb|AFX90760.1| DNA-cytosine methyltransferase [Helicobacter pylori Aklavik117]
Length = 309
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++A ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQAGF--EIGWANELDKDACNTYRANFKHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V +T ++E L N Y IL+ ++ +P +R R + +
Sbjct: 114 LVSHNKGETLKFILETLKNLGYFVHYKILNTYEYSTIPQNRERIYIIG 161
>gi|149369548|ref|ZP_01889400.1| C-5 cytosine-specific DNA-methylase [unidentified eubacterium
SCB49]
gi|149356975|gb|EDM45530.1| C-5 cytosine-specific DNA-methylase [unidentified eubacterium
SCB49]
Length = 421
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ ++GIGG R +L ++ + V + + + Y+ NFG P+ G+I
Sbjct: 97 FKFIDLFAGIGGFRMALQ--NLEGKCVFTSEWDKYSKQTYKANFGEIPF-GDITRPQTKS 153
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
PCQ ++ G + D R F + E+I K P +F+ENV G
Sbjct: 154 YIPDNFDVLCAGFPCQAFSIAGKRGGFEDTRGTLFFDVAEIIKR--KKPKAIFLENVKGL 211
Query: 133 ETSD---THAKMIEILAN--SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
D T A ++ +L + Y+ + IL+ +FGVP +R R F + RK L
Sbjct: 212 RNHDKGKTLATILNVLREDLNYYVPEPQILNAKKFGVPQNRERIFIVGFRKDLG 265
>gi|220929948|ref|YP_002506857.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10]
gi|220000276|gb|ACL76877.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10]
Length = 338
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 85/174 (48%), Gaps = 12/174 (6%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
++ ++ ++G+GG R +L + A+ V + + + VY NFG P +G+I +
Sbjct: 11 GFKFIDLFAGLGGFRIAL--ESLGAKCVYSNEWDKPVRKVYTDNFGDIP-EGDITQINEN 67
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ H L + PCQ ++ G Q+ D+R F + ++ K P ++F+ENV
Sbjct: 68 SIP---EHDILCAGFPCQAFSISGKQRGFEDSRGTLFFDVARIV--KAKKPKIVFMENVK 122
Query: 131 GFETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLS 181
F + D + + A + L +F +L+ + +G+P +R R + + R L+
Sbjct: 123 NFVSHDDGKTLCIVKATMEELGYKFNQKVLNAVNYGIPQNRERIYMVCFRNDLN 176
>gi|428779102|ref|YP_007170888.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|1709152|sp|P50185.1|MTD5_DACSA RecName: Full=Modification methylase DsaV; Short=M.DsaV; AltName:
Full=Cytosine-specific methyltransferase DsaV
gi|505694|gb|AAA86046.1| DsaV methyltransferase [Dactylococcopsis salina]
gi|428693381|gb|AFZ49531.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 351
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++GIGGMR ++ + V + +I+ YE NFG P G+I L+A
Sbjct: 7 KFIDLFAGIGGMRIPF--EELGGKCVFSSEIDKHCQRTYEANFGEMP-TGDITKLSA--- 60
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
D H LL+ PCQ +++ G ++ D R F ++ +++ P + +ENV G
Sbjct: 61 DSIPYHDLLLAGFPCQAFSQGGRKQGFQDERGQLFFQVAKILND--HRPQAILLENVKGL 118
Query: 133 ETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
D T ++ +L +Y+ I+S F +P R R F +
Sbjct: 119 RGHDKGRTLQMILYVLEKLNYVVSWKIISATDFNLPQKRERIFIVG 164
>gi|260909972|ref|ZP_05916659.1| modification methylase EcoRII [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635922|gb|EEX53925.1| modification methylase EcoRII [Prevotella sp. oral taxon 472 str.
F0295]
Length = 370
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPY----QGNIQNLT- 69
++ ++GIGG ++ M++ V + V A + + A YE N+ P+ GN Q L
Sbjct: 9 IDLFAGIGGF-HTAMRS-VGGKCVFASEWDKNARLSYEANYIESEPHLFKKGGNGQYLYF 66
Query: 70 ------AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK---P 120
A +M PCQP++ GL++ D R F I ++ V+ P
Sbjct: 67 NEDINHAIPSEMPNFDICCGGFPCQPFSVAGLKRGFDDTRGTLFFNIANIVREKVRAGHP 126
Query: 121 PHMLFVENVVGFETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKR 177
P +LF+ENV G + D + ILA D L + +L+ FGVP +R R F +A
Sbjct: 127 PRVLFLENVRGLKNHDKGKTLNVILATLDELGYNYSHEVLNAKYFGVPQNRERLFIIAWN 186
Query: 178 KPL 180
+ L
Sbjct: 187 REL 189
>gi|317497297|ref|ZP_07955620.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895366|gb|EFV17525.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 385
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 11/167 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ ++GIGG+R + + V + + + A Y +NFG P G+I +E
Sbjct: 72 FKQIDLFAGIGGIRQAFQRQ--GGYNVYSSEWDKFAQKTYRINFGEIP-DGDIT--LVSE 126
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV--- 129
D+ L PCQP+++ GL K DAR F + +I K P +ENV
Sbjct: 127 NDIPDHDILLAGFPCQPFSQAGLHKGFEDARGTLFFDVARII--RAKRPKAFMLENVKQL 184
Query: 130 VGFETSDTHAKMIEILANSDYLTQE-FILSPLQFGVPYSRPRYFCLA 175
G + +T ++ IL DY + IL+ FG+P +R R +
Sbjct: 185 KGHDKGNTIKVILSILNELDYYVPDPQILNAYHFGIPQNRERIIIVG 231
>gi|188527161|ref|YP_001909848.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi470]
gi|188143401|gb|ACD47818.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi470]
Length = 309
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++A ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQAGF--EIDWANELDKDACNTYRANFKHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V +T ++E L N Y IL+ ++ +P +R R + +
Sbjct: 114 LVSHNKGETLKFILETLKNLGYFVHYKILNTYEYSTIPQNRERIYIIG 161
>gi|384887373|ref|YP_005761884.1| DNA-cytosine methyltransferase [Helicobacter pylori 52]
gi|261839203|gb|ACX98968.1| DNA-cytosine methyltransferase [Helicobacter pylori 52]
Length = 309
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++A ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQAGF--EIGWANELDKDACNTYRANFKHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V +T ++E L N Y IL+ ++ +P +R R + +
Sbjct: 114 LVSHNKGETLKFILETLKNLGYFVHYKILNTYEYSTIPQNRERIYIVG 161
>gi|421716410|ref|ZP_16155721.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
gi|407220673|gb|EKE90479.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
Length = 309
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++A ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQAGF--EIGWANELDKDACNTYRANFRHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V +T ++E L N Y IL+ ++ +P +R R + +
Sbjct: 114 LVSHNKGETLKFILETLKNLGYFVHYKILNTYEYSTIPQNRERIYIIG 161
>gi|390953503|ref|YP_006417261.1| DNA-methyltransferase Dcm [Aequorivita sublithincola DSM 14238]
gi|390419489|gb|AFL80246.1| DNA-methyltransferase Dcm [Aequorivita sublithincola DSM 14238]
Length = 436
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 20/182 (10%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
+++ ++ ++GIGG R + ++ + V + + + Y+ NFG P+ ++ T +
Sbjct: 103 SFKFIDLFAGIGGFRLAFQ--NLGGKCVFTSEWDKYSKQTYKANFGEIPFGDITKDKTKS 160
Query: 72 ----ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+ D+ A PCQ ++ G + D R F + E+I K P +F+E
Sbjct: 161 YIPDDFDVLCA-----GFPCQAFSIAGRRGGFEDTRGTLFFDVAEIIKK--KQPEAIFLE 213
Query: 128 NVVGFETSDTHAKMIEILAN------SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
NV G D K + I+ N + Y+ + I++ +FGVP +R R F + RK L
Sbjct: 214 NVKGLRNHD-KGKTLAIILNVLREDLNYYVPEPKIMNAKEFGVPQNRERIFIVGFRKDLG 272
Query: 182 FR 183
+
Sbjct: 273 IK 274
>gi|386730222|ref|YP_006196605.1| Type II restriction-modification system methylation subunit
[Staphylococcus aureus subsp. aureus 71193]
gi|387603777|ref|YP_005735298.1| modification methylase EcoRII (Cytosine-specificmethyltransferase
EcoRII) (M.EcoRII) [Staphylococcus aureus subsp. aureus
ST398]
gi|404479805|ref|YP_006711235.1| DNA Methyltransferase [Staphylococcus aureus 08BA02176]
gi|418311836|ref|ZP_12923354.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus aureus subsp.
aureus 21331]
gi|418979015|ref|ZP_13526814.1| Type II restriction-modification system methylation subunit
[Staphylococcus aureus subsp. aureus DR10]
gi|283471715|emb|CAQ50926.1| modification methylase EcoRII (Cytosine-specificmethyltransferase
EcoRII) (M.EcoRII) [Staphylococcus aureus subsp. aureus
ST398]
gi|365233356|gb|EHM74312.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus aureus subsp.
aureus 21331]
gi|379993286|gb|EIA14733.1| Type II restriction-modification system methylation subunit
[Staphylococcus aureus subsp. aureus DR10]
gi|384231515|gb|AFH70762.1| Type II restriction-modification system methylation subunit
[Staphylococcus aureus subsp. aureus 71193]
gi|404441294|gb|AFR74487.1| DNA Methyltransferase [Staphylococcus aureus 08BA02176]
Length = 397
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 18/191 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+++++ ++GIGG R + + + V + + + + Y+ NFG P +G+I + A E
Sbjct: 86 YKMIDLFAGIGGTRLGF-QLHGNVKCVFSSEWDKFSAKTYKANFGETP-KGDITQIIADE 143
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H L++ PCQ +++ GL+K +D R F I ++ K P +ENV
Sbjct: 144 IP---THDILVAGFPCQAFSQAGLKKGFNDTRGTLFFDIARIL--KAKRPKCFLLENVKN 198
Query: 132 FETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 187
+ D K +I+ N+ DY IL FG P +R R + + K Q+
Sbjct: 199 LRSHD-KGKTFDIIMNTLLELDYDVSSSILRARDFGCPQNRERIYIVGFDKQ-----QIK 252
Query: 188 NNQLLRSPSPL 198
N + P PL
Sbjct: 253 NAENFSFPEPL 263
>gi|269123998|ref|YP_003306575.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
gi|268315324|gb|ACZ01698.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
Length = 438
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 163/424 (38%), Gaps = 75/424 (17%)
Query: 14 RVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
+ ++ ++G+GG+R +A +S + V + +I A Y FG G+I+ ++
Sbjct: 18 KFIDLFAGLGGIRIGFEQAFNTLGISTECVFSSEIKKHAILSYTKYFGDYKIHGDIKEIS 77
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
++ + L PCQP++ G + +D R F +I ++ + K P+ +ENV
Sbjct: 78 VDDIPDF--DFLLAGFPCQPFSSAGNRLGFNDTRGTLFFEIERILKN--KKPYGFLLENV 133
Query: 130 VGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL----- 180
G D + K +E + NS Y +L ++FG+ SR R + + + L
Sbjct: 134 EGLINHD-NGKTLETILNSLNSLGYKVNYKVLDSIEFGLAQSRKRIYIVGTKDKLISLEN 192
Query: 181 ------SFR------CQLLNNQLLR------SPSPLLGNDDMTVITKHDQPDD--SWDKL 220
SFR C+ LN R +P L G ++ K D+ SWD
Sbjct: 193 FDKKYSSFRDIQEKNCETLNTDFTRKLLLNYNPCDLYGK---SIKDKRGGSDNIHSWDIG 249
Query: 221 L--ESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVP 278
L E D + L G + + +D T++ I F
Sbjct: 250 LKGEVTDKQKELL-----GALLKERRKKVWAAEIGIDWMDGMPLTLK-----QISTFFND 299
Query: 279 LSLIERWGSAMD-----IVYPD----SKRCCCFTKSY-YRYVKGTGS-----------LL 317
SL E + + YP +KR TK Y V G S +
Sbjct: 300 KSLKEMLNDLVQKKYLVLEYPKKLVGNKREYDITKEKGYNIVTGKLSFEFSKILNPDGVA 359
Query: 318 ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAV 377
T+ + K + + +R T RE L FP D+ L R+ LLGN++ I V
Sbjct: 360 PTLVATDVEKLGVIDNKGIRKLTIREGLRLFGFPEDYSL-DFLKYRESLDLLGNTVCIPV 418
Query: 378 VAPL 381
+ +
Sbjct: 419 IKSI 422
>gi|383449604|ref|YP_005356325.1| Type II modification methyltransferase HpaII [Flavobacterium
indicum GPTSA100-9]
gi|380501226|emb|CCG52268.1| Type II modification methyltransferase HpaII [Flavobacterium
indicum GPTSA100-9]
Length = 422
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ ++GIGG R ++ ++ + V + + A Y+ NFG RP+ G+I
Sbjct: 97 FKFIDLFAGIGGFRLAMQ--NLGGKCVFTSEWDKDAKRTYKANFGERPF-GDITKEETKA 153
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
G PCQ ++ G + D R F + E+I K P +F+ENV G
Sbjct: 154 FIPDGFDLLCAGFPCQAFSIAGKRGGFEDTRGTLFFDVAEIIKR--KQPKAIFLENVKGL 211
Query: 133 ETSD---THAKMIEILAN--SDYLTQEFILSPLQFGVPYSRPRYFCLA 175
+ T A ++ +L N ++ + I++ FGVP +R R + +
Sbjct: 212 RNHNGGKTLATILNVLRNDLGYFIPEPQIINAKDFGVPQNRERIYIVG 259
>gi|414077047|ref|YP_006996365.1| DNA-cytosine methyltransferase [Anabaena sp. 90]
gi|413970463|gb|AFW94552.1| DNA-cytosine methyltransferase [Anabaena sp. 90]
Length = 328
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
+ ++ +SG GG R ++ + + Q V + DI+ A +Y NFG P I ++T
Sbjct: 3 KFIDLFSGTGGFRLAIERICHNYKIPCQCVFSSDIDINAQKIYLENFGETP----IGDIT 58
Query: 70 AAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
+ + H LL PCQP++ G K D R F I +I + K P +EN
Sbjct: 59 KIDENDIPDHDILLGGFPCQPFSICGELKGFEDTRGTLFFDIARIIKN--KQPSAFILEN 116
Query: 129 VV---GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
V G + T +I L + Y T IL+ + FG+P R R +
Sbjct: 117 VKQLKGHQQGQTLQIIINTLKDLGYYTDYQILNAVNFGLPQKRERILIVG 166
>gi|386820986|ref|ZP_10108202.1| DNA-methyltransferase Dcm [Joostella marina DSM 19592]
gi|386426092|gb|EIJ39922.1| DNA-methyltransferase Dcm [Joostella marina DSM 19592]
Length = 461
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++G+GG +L ++ + V A +++ +VY+ N+G QG+I+ + E+
Sbjct: 7 KFIDLFAGLGGFHKALH--ELGHECVFASELDPTLRNVYQANWGIEA-QGDIKRIVEKEI 63
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
+ H L + PCQP+++ G Q D R F +I +++ + P +ENV
Sbjct: 64 ESIPPHDILCAGFPCQPFSKAGKQLGRDDDRGTLFDEIAKIL--AFRKPKFFILENVPFI 121
Query: 133 ETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
+ D T M L+N Y + SP FGVP R R F +
Sbjct: 122 KQHDNEETWNYMHNELSNLGYEVDHQVYSPQDFGVPQHRKRIFIVG 167
>gi|282879499|ref|ZP_06288233.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS
5C-B1]
gi|281306646|gb|EFA98672.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS
5C-B1]
Length = 438
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 77/202 (38%), Gaps = 44/202 (21%)
Query: 10 GEAWRVLEF------------YSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELN-- 55
G++W+ LEF +SGIG + ++L + + +V A DI+ Y N
Sbjct: 47 GKSWKDLEFSNPERTIRLGTMFSGIGAIEHALQRLRLKHHIVFAGDIDANCKKSYFANYD 106
Query: 56 ------------FGHRPYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDAR 103
F R Y+G I L PCQ ++ G + DAR
Sbjct: 107 IKEKDWFNDARTFDARKYRGQIDLLVGG-------------APCQAFSMVGKRLGFEDAR 153
Query: 104 AFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMIEILANSDYLTQEFILSPL 160
F + +I T P + ENV G D T M I A+ Y +L+
Sbjct: 154 GTLFYEFARVIKET--QPKVFIFENVKGLINHDKGRTWMVMHSIFADLGYQVNYRVLNSK 211
Query: 161 QFGVPYSRPRYFCLAKRKPLSF 182
+G+P R R FC+ P+ F
Sbjct: 212 DYGIPQHRERIFCIGFHTPVKF 233
>gi|304373674|ref|YP_003858419.1| putative DNA-methyltransferase, type II restriction-modification
system [Enterobacteria phage RB16]
gi|299829630|gb|ADJ55423.1| putative DNA-methyltransferase, type II restriction-modification
system [Enterobacteria phage RB16]
Length = 302
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
++++ +G+GG+R+ A + + +I+ A Y N+G QG+ L A +
Sbjct: 2 KIIDLCAGVGGVRFGFDNAFGGVECLLTSEIDKHAQQTYIENWGDDNLQGD---LFAIDE 58
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
+ H LL+ PCQ +++ GL+ DAR F +IL +I K P +LF ENV
Sbjct: 59 NKVPDHDILLAGFPCQAFSKAGLKLGFDDARGTVFFEILRII--RAKKPRVLFFENVPEL 116
Query: 133 ETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 174
T D T + +L Y L+ FG+P R R F +
Sbjct: 117 LTHDKGKTFKTIYGLLEAEGYNVFYQRLNTKDFGLPQRRERVFIV 161
>gi|328543334|ref|YP_004303443.1| DNA methylase [Polymorphum gilvum SL003B-26A1]
gi|326415695|gb|ADZ72758.1| DNA methylase, C-5 cytosine-specific family [Polymorphum gilvum
SL003B-26A1]
Length = 418
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 151/396 (38%), Gaps = 39/396 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLTAAE 72
R ++ ++G GG+ A +V D++ A + LNF + +G + L A E
Sbjct: 23 RCVDLFAGAGGLAVGFRSAGWG--IVAGNDVDPDAAQTFRLNFPEASFFEGPVSKLAADE 80
Query: 73 L------DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
L + + PPCQ ++ + + D RA F L L+ P L +
Sbjct: 81 LLADCGIERGDLDCLVGGPPCQSFSHNNHHRSAVDERARLFEHYLTLV--GALNPKTLVM 138
Query: 127 ENVVGFETSDTHAKMIEILANSDYLTQEFI---LSPLQFGVPYSRPRYFCLAKRKPLSFR 183
ENV G + D + EILA+ L + + LS +FG P R R F +A R +
Sbjct: 139 ENVPGILSIDGGRVVDEILASLKELGFDAVVGRLSAEEFGTPQLRRRVFIVASR--IGAA 196
Query: 184 CQLLNNQLLRSPS-PLLGNDDMTVITKHDQPDDSWDKL-----LESCDPVERFLEFSNSG 237
+LL N SP+ G +P W + +E+ V+ +++S
Sbjct: 197 SELLPNPTHWSPALAKWGGPKERPAGATKRPVTVWQAIGDLPEIENGGGVQ-IAPWASSH 255
Query: 238 DQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSA-MDIVYPDS 296
+ + A +V +DR V + W + D++
Sbjct: 256 PTTTYQREMRRAAPQLYNHVCHALASVNLDRIVHVPEG-------GNWRNVPRDLLPAGM 308
Query: 297 KRCCC--FTKSYYRYVKG--TGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPG 352
KR TK Y R +G ++L P ++ R + RE A L FP
Sbjct: 309 KRARLQDHTKRYGRLSRGGFASTILTKCDPHWGAYVHPTQD---RTISVREAARLQGFPD 365
Query: 353 DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
F+F +L + Y +GN++ I V + + A
Sbjct: 366 SFRFAGD-NLSKHYTQVGNAVPIQVAQAIGSAVLAH 400
>gi|331002097|ref|ZP_08325616.1| hypothetical protein HMPREF0491_00478 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411191|gb|EGG90607.1| hypothetical protein HMPREF0491_00478 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 706
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 11/195 (5%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL 68
+ + + ++ ++GIGG R D + V + +I++ A ++YELNFG P + +I L
Sbjct: 2 ENKKLKFIDLFAGIGGFRLGF--EDAGCKCVFSSEIDEHACEMYELNFGENP-KCDITKL 58
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVE 127
++ + PCQ ++ G QK D R F I +I K P +E
Sbjct: 59 NIKDIPDF--DILCAGFPCQAFSICGKQKGFYDETRGTLFFDICRIIEE--KRPKTFILE 114
Query: 128 NVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 184
NV E D T M+ +L+ Y +L+ FGVP +R R + F
Sbjct: 115 NVSNLEKHDSGRTLTVMLSVLSELGYTVVYKVLNARNFGVPQNRERIIIVGNIDGRIFDF 174
Query: 185 QLLNNQLLRSPSPLL 199
L + + P L
Sbjct: 175 TKLKMNTVETMKPFL 189
>gi|262201418|ref|YP_003272626.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247]
gi|262084765|gb|ACY20733.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247]
Length = 342
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 12/171 (7%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLTAAEL 73
V++F+SG GG A + Q+ D + A+ ++ NF + +G+I+N++ ++
Sbjct: 8 VVDFFSGCGGTSAGFRSAGM--QIAAGLDSDPDASATFKRNFKKSSFIEGDIRNVSTEQV 65
Query: 74 -DMYGAHAWLL---SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
D+ + A L PCQP++RQ + ++D R + + P ++ +ENV
Sbjct: 66 SDVVPSGAVTLFAGCAPCQPFSRQNGNRSANDPRRNLLREFQRFV--LALHPDLVVIENV 123
Query: 130 VGFETSDTHAKM---IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
G + + + ++ Y +L L+FGVP R R LA R
Sbjct: 124 PGLQLQSRKGPLDSFLRAISRDGYAVNVRVLRALEFGVPQERRRLVVLASR 174
>gi|212716999|ref|ZP_03325127.1| hypothetical protein BIFCAT_01946 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212660059|gb|EEB20634.1| hypothetical protein BIFCAT_01946 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 392
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 111/250 (44%), Gaps = 42/250 (16%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF----GHRPYQGNIQNLT 69
+ LEF++GIG R L ++ QV + DI+ ++Y NF GH +G++ L+
Sbjct: 16 QALEFFAGIGLARLGLEESGF--QVEWSNDIDSAKCEMYRNNFTDTPGHTLVEGDMSELS 73
Query: 70 AAELDMYGAHAWLLSPPCQPY----TRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
+L + AW S PC TR GL + S A + ++++LE + + +PP +
Sbjct: 74 GDDLPHDASIAWG-SSPCTDLSLAGTRTGLNGKQSGA-FWQYVRLLEELGDS-RPP-IAI 129
Query: 126 VENVVGFETSDTH---AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS- 181
+ENV G TS + A + Y + +F +P SRPR F + + P S
Sbjct: 130 LENVNGLATSHSGEDLAAAVHAFNVLGYSVDVLSIDTRRF-IPQSRPRLFLVGLQNPPSA 188
Query: 182 ----------FRCQLLNNQLLRS--------PSPLLGNDDMTVITKHDQPDDSWD----- 218
+ Q+ + LR+ PSPL+ +M V D + WD
Sbjct: 189 EQFDSSLRPDWLQQVFADTSLRTHRAPLPEPPSPLMSGLNMYVENMADDDERWWDAERTA 248
Query: 219 KLLESCDPVE 228
K L+S PV+
Sbjct: 249 KFLDSLSPVQ 258
>gi|68075627|ref|XP_679733.1| modification methylase-like protein [Plasmodium berghei strain
ANKA]
gi|56500547|emb|CAH94597.1| modification methylase-like protein, putative [Plasmodium berghei]
Length = 689
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 101 DARAFSFLKILELIPH--TVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILS 158
D R +SF + L+ + P +F+ENV FE+S + I + N +Y Q ++LS
Sbjct: 256 DKRVYSFFHVCNLLKNMNVNNLPKYIFIENVKNFESSFSFLYFINSIKN-NYNFQTYLLS 314
Query: 159 PLQFGVPYSRPRYFCLAKRK 178
PLQFG+P R R++C+ KRK
Sbjct: 315 PLQFGIPNERLRFYCICKRK 334
>gi|420413317|ref|ZP_14912441.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|420418302|ref|ZP_14917394.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393029304|gb|EJB30385.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393033128|gb|EJB34191.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 309
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++ V ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQ--VGFEIGWANELDKDACNTYRANFKHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIVVEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V +T ++E L N Y IL+ ++ +P +R R + +
Sbjct: 114 LVSHNKGETLKFILETLKNLGYFIHYKILNTYEYSTIPQNRERIYIIG 161
>gi|365128270|ref|ZP_09340555.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum sp.
4_3_54A2FAA]
gi|363623307|gb|EHL74431.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum sp.
4_3_54A2FAA]
Length = 359
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 10/171 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ + G+GG+ Y L KA + VV DI+D Y N +++++T E+
Sbjct: 4 KAVDLFCGVGGLTYGLQKAGIP--VVAGIDIDDSCEYAYTHNNNCTFIHKSVEDVTGKEI 61
Query: 74 D--MYGAHAWLL--SPPCQPYTRQGLQKQS-SDARAFSFL-KILELIPHTVKPPHMLFVE 127
+ GA +L PCQP++ KQ+ S + + L + L+ T PH++ +E
Sbjct: 62 RALLRGADVKILVGCAPCQPFSSHQKDKQNRSKHKDWKLLYQFGRLVEET--RPHIVSME 119
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
NV E + L +Y+ +++ +GVP R R LA R+
Sbjct: 120 NVPELEKEKVFKDFVSTLEGLNYIVNYQVVNVANYGVPQRRKRLILLASRR 170
>gi|296453364|ref|YP_003660507.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
longum JDM301]
gi|384196400|ref|YP_005582144.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium breve
ACS-071-V-Sch8b]
gi|296182795|gb|ADG99676.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
longum JDM301]
gi|333109600|gb|AEF26616.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium breve
ACS-071-V-Sch8b]
Length = 392
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 42/250 (16%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF----GHRPYQGNIQNLT 69
+ LEF++GIG R L +A QV + DI+ ++Y NF GH +G++ L+
Sbjct: 16 QALEFFAGIGLARLGLEEAGF--QVEWSNDIDAAKCEMYRNNFTDTPGHTLVEGDMSELS 73
Query: 70 AAELDMYGAHAWLLSPPCQPY----TRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
+L + AW S PC TR GL + S A + ++++LE + +T +PP +
Sbjct: 74 GDDLPHDASIAW-GSSPCTDLSLAGTRTGLNGKQSGA-FWQYVRLLEELGNT-RPP-IAV 129
Query: 126 VENVVGFETSDTH---AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS- 181
+ENV G TS + A + Y + +F +P SRPR F + + P +
Sbjct: 130 LENVNGLATSHSGEDLAAAVHAFNELGYSVDVLSIDTRRF-IPQSRPRLFLVGLQNPPAA 188
Query: 182 ----------FRCQLLNNQLLRS--------PSPLLGNDDMTVITKHDQPDDSWD----- 218
+ Q+ + LR+ PSPL+ +M V + + + W+
Sbjct: 189 EQFDSSLRPDWLQQVFADTSLRTHRAPLPEPPSPLMSGLNMYVESMANDDERWWNAERTA 248
Query: 219 KLLESCDPVE 228
K L+S PV+
Sbjct: 249 KFLDSLSPVQ 258
>gi|419652936|ref|ZP_14183979.1| hypothetical protein cje146_08282 [Campylobacter jejuni subsp.
jejuni 2008-894]
gi|380627593|gb|EIB45971.1| hypothetical protein cje146_08282 [Campylobacter jejuni subsp.
jejuni 2008-894]
Length = 256
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ 66
N+ + + ++ ++GIGG+R + V + +I+ A Y NF P+ G+I
Sbjct: 3 NNTKKLKAIDLFAGIGGIRIGFKNIFQEKLEFVFSSEIDKFACQTYFCNFNELPH-GDIT 61
Query: 67 NLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
+ + H LL+ PCQ ++ G +K +D R F + ++ P ++F
Sbjct: 62 QINENNIP---KHNILLAGFPCQAFSIAGHRKGFNDIRGTLFFDVARIVKKH--KPEIVF 116
Query: 126 VENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA----KRK 178
+ENV GF+ D T + + L + Y +L+ FG+P +R R + +A K K
Sbjct: 117 LENVKGFKNHDKGKTFSVVKNTLEDMGYDVFSEVLNARNFGIPQNRERIYIVAFLKNKFK 176
Query: 179 PLSFRCQLLNNQLLRSP 195
+SF L N ++S
Sbjct: 177 NISFNFNELKNIEIKSK 193
>gi|119493789|ref|ZP_01624358.1| type II restriction enzyme HaeII [Lyngbya sp. PCC 8106]
gi|119452484|gb|EAW33671.1| type II restriction enzyme HaeII [Lyngbya sp. PCC 8106]
Length = 689
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 25/218 (11%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++ ++GIGG+R ++ + V + + ++ A + YE NFG RP G+I + +
Sbjct: 13 IDLFAGIGGIRLPF--EELGGKCVFSSEWDEAAQETYEANFGERPL-GDITTIDPGSIP- 68
Query: 76 YGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET 134
H LL+ PCQ ++ G + ++AR F I E+I K P +ENV +T
Sbjct: 69 --HHDILLAGFPCQAFSIIGKMEGFNEARGTLFYNI-EMILKA-KQPQAFLLENVKQLKT 124
Query: 135 SD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQL 191
D T + E L N Y +L+ L FG+P R R + + L N
Sbjct: 125 HDKGKTFKVITEHLQNLGYHLYTEVLNALDFGLPQKRERTYIVG----------FLENIH 174
Query: 192 LRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVER 229
P P+ ++ I +PD+ DK L + + +++
Sbjct: 175 FSFPKPIQKRVSLSEIL---EPDEQVDKSLFASEFIQK 209
>gi|325973250|ref|YP_004250314.1| cytosine-specific DNA modification methylase, HpaII-like protein
[Mycoplasma suis str. Illinois]
gi|323651852|gb|ADX97934.1| cytosine-specific DNA modification methylase, HpaII-like protein
[Mycoplasma suis str. Illinois]
Length = 326
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSL-MKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ 66
N+ +R+++ ++GIGG R + +V +VV + +I+ A Y+ NF P G+I+
Sbjct: 14 NENSKYRMIDLFAGIGGTRLGFHLTGEV--KVVFSSEIDKFAKKTYKSNFSDEPL-GDIR 70
Query: 67 NLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
+ + ++ H L++ PCQ +++ G +K D R F +I+ ++ K P
Sbjct: 71 EINSEDIP---NHDILVAGFPCQAFSQAGKKKGFEDERGALFFEIIRILKD--KKPKTFL 125
Query: 126 VENVVGFETSDTHA--KMIEI-LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
+ENV T + K+IE L + +Y +L FG+P +R R + + K L
Sbjct: 126 LENVKNLRTHNKGETLKVIEQHLKDLNYHITYKVLKSRDFGIPQNRERIYIVGFNKDL 183
>gi|422303947|ref|ZP_16391296.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9806]
gi|389791017|emb|CCI13157.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9806]
Length = 405
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 6/170 (3%)
Query: 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
G ++ ++G GG+ KA + +V AFD A DVY NF H + ++ +
Sbjct: 93 GSKMITIDLFAGCGGLSLGFQKAGFT--IVAAFDNWIPAIDVYRNNFSHPIFNVDLSRES 150
Query: 70 AAEL-DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
+ E+ Y + SPPCQ ++ G ++ RA L E++ T P +EN
Sbjct: 151 SQEIFAQYNPEIIVGSPPCQDFSSAG-KRDEGLGRANLKLTFAEIV--TGVSPQWFVMEN 207
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
V E S + +I + Y +++ GVP +R RYF + K K
Sbjct: 208 VDRIEKSKILTQAKQIFKSHGYGLTGKVINSCYCGVPQTRKRYFLIGKMK 257
>gi|167746073|ref|ZP_02418200.1| hypothetical protein ANACAC_00768 [Anaerostipes caccae DSM 14662]
gi|373121714|ref|ZP_09535581.1| DNA (cytosine-5-)-methyltransferase [Erysipelotrichaceae bacterium
21_3]
gi|167654588|gb|EDR98717.1| DNA (cytosine-5-)-methyltransferase [Anaerostipes caccae DSM 14662]
gi|371664693|gb|EHO29862.1| DNA (cytosine-5-)-methyltransferase [Erysipelotrichaceae bacterium
21_3]
Length = 312
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 13/171 (7%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
RVL + G GG+ + +V A D + A + Y+ NFG G+I + L
Sbjct: 2 RVLSLFCGCGGLDKGF--DETGYNIVWANDFDKYAVETYKANFGDNVILGDINEIELNSL 59
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTV---KPPHMLFVENVV 130
+ + PCQP++ G +K D R F +I E++ + + + P + +ENV
Sbjct: 60 PEF--DVLIGGFPCQPFSMMGAEKGFEDTRGTLFFRIAEILKYKIDQGRKPRTVILENVR 117
Query: 131 GFETSD---THAKMIEILANS-DYLTQEFILSPLQFGVPYSRPRYF--CLA 175
T + T + +L N +Y + +L+ +G+P +R R + C A
Sbjct: 118 SLRTHNKGKTFKTIKRVLENELNYKVFDQVLNTADYGIPQTRNRTYIVCFA 168
>gi|423135701|ref|ZP_17123347.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CIP
101113]
gi|371640805|gb|EHO06401.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CIP
101113]
Length = 321
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+ V Y+G+GG+ A+ +D N A Y NF H+ + ++ N+
Sbjct: 5 FSVGSLYAGVGGICLGFKNANFELAWANEYDKN--ACITYRKNFKHQLIEEDVFNVDIDS 62
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
L A PCQP++ G +K D R F +IL+ + + P ++F+ENV
Sbjct: 63 LSKVDVLAGGF--PCQPFSVAGYRKGFDDHRGNHFFRILDFV--DIIRPKVVFLENVKNL 118
Query: 133 ETSD--THAKMIE-ILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
+T D T K+IE L +Y Q +L+ +G +P++R R F +A
Sbjct: 119 KTHDKGTTFKVIENALRERNYSFQSAVLNTKDYGNIPHNRERIFIVA 165
>gi|150400370|ref|YP_001324137.1| DNA-cytosine methyltransferase [Methanococcus vannielii SB]
gi|150013073|gb|ABR55525.1| DNA-cytosine methyltransferase [Methanococcus vannielii SB]
Length = 368
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 28/229 (12%)
Query: 8 NDGEAWRVLEFYSGIGGMR------YSLMKADVSA---QVVEAFDINDKANDVYELNFGH 58
N + ++V+ +SG GGM + + K +++ + DI+DKA YE NF H
Sbjct: 30 NYAKKFKVISLFSGCGGMDLGFKGGFEIFKQHYEHNPYEIIFSNDISDKACRTYESNFCH 89
Query: 59 RPYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTV 118
+I+++ D+ A + PCQ ++ G +K S R +L++ +I +
Sbjct: 90 SSVCADIKDIKNE--DIPNADIVIGGFPCQDFSHAGKRKGLSAERGRLYLEMKRVIDYI- 146
Query: 119 KPPHMLFVENVVGFETS----DTHA--KMIEILANSDYLTQEFILSPLQFGVPYSRPRYF 172
P ENV G T+ DT A +++ +S Y +L+ +GVP +R R
Sbjct: 147 -KPIAFVAENVDGIRTNSKGKDTTALDIILKDFMDSGYQVAYKVLNTADYGVPQTRIRVI 205
Query: 173 CLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDM-TVITKHDQPDDSWDKL 220
+ R + + + P P+ GN+ + +T + DD WDK+
Sbjct: 206 IMG------IRNDYVGDIMY--PKPVRGNEGLFEWMTSKEAIDDLWDKI 246
>gi|376002334|ref|ZP_09780170.1| Modification methylase M.Asp8005ORF1636 (Cytosine-specific
methyltransferase M.Asp8005ORF1636) (prototype M.HgiCI)
[Arthrospira sp. PCC 8005]
gi|375329328|emb|CCE15923.1| Modification methylase M.Asp8005ORF1636 (Cytosine-specific
methyltransferase M.Asp8005ORF1636) (prototype M.HgiCI)
[Arthrospira sp. PCC 8005]
Length = 429
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 26/178 (14%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAF----------DINDKANDVYELNFGHRP 60
+ + ++ ++GIGG+R Q VE+F +I+ A VY+ NF P
Sbjct: 2 KTVKFIDLFAGIGGLRLGF------EQAVESFGCIPDCLLSSEIDRDARQVYQANFSETP 55
Query: 61 YQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP 120
QG+I+ +++ + H L PCQ ++ G + D R F +IL LI +
Sbjct: 56 -QGDIKTISS----LPPHHILLAGFPCQSFSYAGKKAGFGDTRGTLFFEILRLI--DSQQ 108
Query: 121 PHMLFVENVVGFETSDTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
P ENV G T D + I + + Y F+L+ +GVP +R R + +
Sbjct: 109 PQAFIFENVRGLVTHDQGKTINTIRQKMQDRGYSFDLFLLNSSNYGVPQNRVRAYMMG 166
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 336 LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
+R TPRE A L FP FQ H + + Y LGNS++I VV + Q L
Sbjct: 366 VRRITPREAARLQGFPDSFQL--HPNQNKAYRQLGNSVTIPVVKAIAQELL 414
>gi|451980761|ref|ZP_21929147.1| Cytosine-specific methyltransferase (modular protein) [Nitrospina
gracilis 3/211]
gi|451762097|emb|CCQ90386.1| Cytosine-specific methyltransferase (modular protein) [Nitrospina
gracilis 3/211]
Length = 463
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 161/381 (42%), Gaps = 69/381 (18%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT----AA 71
+ +SG GG+ +A + V A D++ A Y N G +G+I ++
Sbjct: 93 VSLFSGCGGIDLGFRQAGF--KTVFANDLDPDACSTYRSNLGE-IVEGDIHTVSLPRMRK 149
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+LD+ A PCQP++ G +K D R + LE++ +KP ++F ENV G
Sbjct: 150 KLDILSAGF-----PCQPFSNAGSRKGIKDKRGTLYQTALEVV-EELKPRAVVF-ENVRG 202
Query: 132 FETSDTHAKMI--EILANSDYLTQEFILSPL---QFGVPYSRPRYFCLAKRKPLSFRCQL 186
+ T K++ EI + D+L + + S + + VP R R F + +
Sbjct: 203 LLSFKTEKKLLIEEICEHLDFLGYDVLFSLVDASKHHVPQKRLRVFMVGIERA------- 255
Query: 187 LNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 246
N P+P+ ND + KH +L+ C + N + +
Sbjct: 256 KKNGRFSFPAPVERND---LTLKHT--------ILDICQNTQ------NQQELIQLNPQA 298
Query: 247 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 306
+ G+ + G + +++ ++ L ER D + + R F + +
Sbjct: 299 IHIGSMVPE--GGSWKSIPYEK------------LPERLKKIADNM--EKYRWPNFYRRF 342
Query: 307 YRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRY 366
+R + G++ A +P+N G L++ R F+ RE+A + SFP F+F +++ +Y
Sbjct: 343 HRN-EVAGTITAAFKPENAGVWHPLEQ---RVFSVREIARIQSFPDWFRFEGR-NIKSKY 397
Query: 367 ALLGNSLSIAVVAPLLQYLFA 387
+GN+ V P L Y A
Sbjct: 398 QQIGNA-----VPPRLAYELA 413
>gi|408675054|ref|YP_006874802.1| DNA-cytosine methyltransferase [Emticicia oligotrophica DSM 17448]
gi|387856678|gb|AFK04775.1| DNA-cytosine methyltransferase [Emticicia oligotrophica DSM 17448]
Length = 370
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 10/166 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ ++GIGG +L + A V A + + A D YE NF RP G+I + E
Sbjct: 35 YKFIDLFAGIGGFHIAL--SSFGASCVFASEWDKYAADSYEANFNQRPV-GDITQIN--E 89
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV--- 129
+D+ PCQ ++ G Q D R F I+ +I P ++F+ENV
Sbjct: 90 IDIPKHDILCAGFPCQSFSISGKQMGFEDIRGSLFFDIVRII--NFHKPKVVFLENVKNL 147
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
V + T +I L + Y IL+ FG+P +R R + +A
Sbjct: 148 VNHDEGRTLKVVIYTLESVGYKVFTKILNSSNFGLPQNRERIYIVA 193
>gi|325270514|ref|ZP_08137114.1| modification methylase HindV [Prevotella multiformis DSM 16608]
gi|324987090|gb|EGC19073.1| modification methylase HindV [Prevotella multiformis DSM 16608]
Length = 320
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 7/165 (4%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA-- 71
+ ++ + G GG+ +A + VV A+D D A DVY LNF H ++ ++ + A
Sbjct: 2 KAVDLFCGCGGLSLGFQQAGYN--VVAAYDNWDAATDVYRLNFSHPVHKADLMDAGKASE 59
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ Y + PPCQ Y+ G + + RA ++ E++ P +ENV
Sbjct: 60 SIARYAPEIIIGGPPCQDYSSAGGRNEEG-GRAILTVRFAEIV--AAVRPGWFVMENVSN 116
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
+ ++IL ++ Y +L+ GVP R R+F + +
Sbjct: 117 IMKYGKVFEAMQILHDAGYGLSCHVLNAALCGVPQRRKRFFMVGR 161
>gi|415747050|ref|ZP_11475794.1| DNA (cytosine-5) methyltransferase [Campylobacter jejuni subsp.
jejuni 327]
gi|315931535|gb|EFV10502.1| DNA (cytosine-5) methyltransferase [Campylobacter jejuni subsp.
jejuni 327]
Length = 284
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ 66
N+ + + ++ ++GIGG+R + V + +I+ A Y NF P+ G+I
Sbjct: 3 NNTKKLKAIDLFAGIGGIRIGFKNIFQEKLEFVFSSEIDKFACQTYFCNFNELPH-GDIT 61
Query: 67 NLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
+ + H LL+ PCQ ++ G +K +D R F + ++ P ++F
Sbjct: 62 QINENNIP---KHNILLAGFPCQAFSIAGHRKGFNDIRGTLFFDVARIVKK--HKPEIVF 116
Query: 126 VENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA----KRK 178
+ENV GF+ D T + + L + Y +L+ FG+P +R R + +A K K
Sbjct: 117 LENVKGFKNHDKGKTFSVVKNTLEDMGYDVFSEVLNARNFGIPQNRERIYIVAFLKNKFK 176
Query: 179 PLSFRCQLLNNQLLRSP 195
+SF L N ++S
Sbjct: 177 NISFNFNELKNIEIKSK 193
>gi|390439088|ref|ZP_10227507.1| Modification methylase HindV [Microcystis sp. T1-4]
gi|389837511|emb|CCI31631.1| Modification methylase HindV [Microcystis sp. T1-4]
Length = 310
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE-L 73
++ ++G GG+ KA + +V AFD A DVY NF H + ++ + E L
Sbjct: 3 TIDLFAGCGGLSLGFQKAGFT--IVAAFDNWIPAIDVYRNNFSHPIFNVDLSRESNQEIL 60
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
Y + SPPCQ ++ G ++ RA L E++ T P +ENV E
Sbjct: 61 AQYNPEIIVGSPPCQDFSSAG-KRNEGLGRANLTLTFAEIV--TRVSPQWFVMENVDRIE 117
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
S + +I + Y +++ GVP +R RYF + K K
Sbjct: 118 KSKILTQAKQIFKSHGYGLTGKVINSCYCGVPQTRKRYFLIGKMK 162
>gi|393781071|ref|ZP_10369272.1| DNA (cytosine-5-)-methyltransferase [Bacteroides salyersiae
CL02T12C01]
gi|392677406|gb|EIY70823.1| DNA (cytosine-5-)-methyltransferase [Bacteroides salyersiae
CL02T12C01]
Length = 371
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 86 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK---PPHMLFVENVVGFETSDTHAKMI 142
PCQP++ GL++ D R F I +I + PP +LF+ENV G +T D +
Sbjct: 89 PCQPFSVAGLKRGFEDTRGTLFFSIANIIREKINAGNPPRVLFLENVRGLKTHDKGNTLK 148
Query: 143 EILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPL 180
ILA + L + +L+ FGVP +R R F +A K L
Sbjct: 149 VILATLEELGYAYSFDVLNAKYFGVPQNRERLFIIAWYKKL 189
>gi|119510471|ref|ZP_01629604.1| DNA cytosine methylase [Nodularia spumigena CCY9414]
gi|119464893|gb|EAW45797.1| DNA cytosine methylase [Nodularia spumigena CCY9414]
Length = 727
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 9/170 (5%)
Query: 17 EFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMY 76
+ ++GIGG R + KAD + V + +I+ VY NFG +P + +I+ + +L +
Sbjct: 10 DLFAGIGGFRLAFEKADY--ECVFSCEIDQACQQVYLNNFGDKP-ECDIRKIDLEKLPYF 66
Query: 77 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF--VENVVGFET 134
PCQP++ G +K D R F I E+I H + PP ++ V++++ +
Sbjct: 67 DV--LTAGFPCQPFSICGHRKGFHDTRGTLFFHICEIIEH-IHPPVVVLENVKHILHHDQ 123
Query: 135 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPR-YFCLAKRKPLSFR 183
T ++ L + Y+ I++ FG+P +R R F K K +F+
Sbjct: 124 GRTLDVILYSLEDMGYIVNYEIVNSRDFGLPQNRERVVFVATKDKKFNFK 173
>gi|425443961|ref|ZP_18824024.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9443]
gi|389732668|emb|CCI03436.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9443]
Length = 382
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE-L 73
++ ++G GG+ KA + +V AFD A DVY NF H + ++ + E L
Sbjct: 98 TIDLFAGCGGLSLGFQKAGFT--IVAAFDNWIPAIDVYRNNFSHPIFNVDLSRESNQEIL 155
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
Y + SPPCQ ++ G ++ RA L E++ T P +ENV E
Sbjct: 156 AQYNPEIIVGSPPCQDFSSAG-KRNEGLGRANLTLTFAEIV--TRVSPQWFVMENVDRIE 212
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
S + +I + Y +++ GVP +R RYF + K K
Sbjct: 213 KSKILIQAKQIFKSHGYGLTGKVINSCYCGVPQTRKRYFLIGKMK 257
>gi|345808802|gb|AEO17041.1| type II modification DNA-cytosine methyltransferase [Bacillus sp.
N16-5]
Length = 372
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 93/226 (41%), Gaps = 32/226 (14%)
Query: 15 VLEFYSGIGGMR------YSLMKADVSAQ---VVEAFDINDKANDVYELNFGHRPYQGNI 65
V+ +SG GGM + + + ++ A DI A VYE NF H G+
Sbjct: 27 VVSLFSGCGGMDLGFRGGFEFLNKNYEENPFNIIFANDIFKAAMQVYEHNFNH---AGDN 83
Query: 66 QNLTAAELDMYG-AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
+++T +L+ A + PCQ ++ G +K S R + ++ ++ H M
Sbjct: 84 ESITEVDLNKIPLADVVIGGFPCQDFSLAGKRKGLSSERGRLYEHMIRVVKHC--NAKMF 141
Query: 125 FVENVVGFETSDTHAK--------MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
ENV G T+ + ++E S Y+ Q +L+ FGVP +R R
Sbjct: 142 VAENVDGIRTNKANKTVDASALDTILENFEKSGYIVQYKVLNAADFGVPQTRKRVIIFGV 201
Query: 177 RKPLSFRCQLLNNQLL--RSPSPLLGNDDMTVITKHDQPDDSWDKL 220
RK + N + +S LG +T D DD WDK+
Sbjct: 202 RKDIY-------NAIYYPKSSHSELGGFGQPWVTSKDALDDIWDKI 240
>gi|227485932|ref|ZP_03916248.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC
51172]
gi|227235977|gb|EEI85992.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC
51172]
Length = 358
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
++ +SG+GG L A + +V A +I+ A Y NF G+I + +
Sbjct: 6 KIASLFSGVGGFEEGLRLAKIDFDLVFASEIDRFAQKSYSSNFDTDNLYGDITKINEKNI 65
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV--- 129
H LL+ PCQ ++ G +K D R F + ++ K P + +ENV
Sbjct: 66 ---PDHDLLLAGFPCQSFSIAGKRKGFEDTRGTLFYDVARILNE--KKPKLFLLENVKNL 120
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPR-YFC 173
+ ++S T +M++IL + +Y I++ ++ GVP +R R Y C
Sbjct: 121 ISHDSSRTIKQMLKILNDLNYTVDFTIINSVESGVPQNRERTYIC 165
>gi|82752078|ref|YP_417819.1| DNA modification methylase [Staphylococcus aureus RF122]
gi|82657609|emb|CAI82057.1| DNA modification methylase [Staphylococcus aureus RF122]
Length = 402
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 16/190 (8%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60
M + ND + + F+SG+GG+ + + +VV A + + A YE NF +
Sbjct: 1 MTDSVSSNDASKYSLAAFFSGVGGIELGFHQTN-KFRVVYANEFDKNAQITYENNFNNVS 59
Query: 61 YQ-GNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
+I ++ +E+ M + + PCQ ++ G QK D R F ++L I K
Sbjct: 60 LDCRDIHDVKTSEIPM--SDVIVGGFPCQAFSIAGYQKGFEDERGDLFFELLRFINE--K 115
Query: 120 PPHMLFVENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
P +F+ENV T D T + E L + Y + +L+ +G +P +R R + +
Sbjct: 116 SPQAIFIENVKNMVTHDHGNTFKVIKEALTLNGYFIKWKVLNAKDYGDIPQNRERIYIVG 175
Query: 176 KRKPLSFRCQ 185
F+C+
Sbjct: 176 ------FKCR 179
>gi|363900396|ref|ZP_09326901.1| hypothetical protein HMPREF9625_01561 [Oribacterium sp. ACB1]
gi|395209970|ref|ZP_10398946.1| DNA (cytosine-5-)-methyltransferase [Oribacterium sp. ACB8]
gi|361956270|gb|EHL09588.1| hypothetical protein HMPREF9625_01561 [Oribacterium sp. ACB1]
gi|394704610|gb|EJF12145.1| DNA (cytosine-5-)-methyltransferase [Oribacterium sp. ACB8]
Length = 319
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA----NDVYELNFGHRPYQGNIQ 66
E VLE + GIG +R +L++ + +V++ +I+ N +Y NF +
Sbjct: 4 ETLNVLELFGGIGAIRKALIRQKIPHKVIDYVEIDKNCVKSYNALYNANFKPKSIIDYNP 63
Query: 67 NLTAAELDMYGAHAWLLSPPCQPYTRQGLQ---KQSSDARAFSFLKILELIPHTVKPPHM 123
+L M+G+ PCQ ++R GL+ K+ S R+ + + +I P +
Sbjct: 64 PEKRIDLLMHGS-------PCQDFSRAGLKQGGKKGSGTRSSLLFETIRIIEEMAMRPKI 116
Query: 124 LFVENVVGFETSDTHAKMIEILANSD---YLTQEFILSPLQFGVPYSRPRYFCLA 175
+ ENV G + A L + Y + IL+ + FG+P R R F ++
Sbjct: 117 VIWENVKGVLDKNLRASFFHYLTEMERLGYKNKYAILNAMDFGIPQKRERIFVVS 171
>gi|418962312|ref|ZP_13514179.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383345960|gb|EID24044.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 325
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 31/209 (14%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA----NDVYELNFG-------HR 59
E +++E + GIG +R + ++ + QV++ +I+ N +Y NF H
Sbjct: 12 ETIKIIELFGGIGAIRKAFIRQKIPHQVIDYVEIDKNCVKSYNALYNTNFKPKSILYFHP 71
Query: 60 PYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPH 116
P + +L M+G+ PCQ ++R GL+K + S R+ + + +I
Sbjct: 72 PDE-------KIDLLMHGS-------PCQDFSRSGLKKGGTKGSGTRSSLLFETIRIIEE 117
Query: 117 TVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFC 173
P ++ ENV G + A L + L E IL+ ++FG+P R R F
Sbjct: 118 MKIRPKIVLWENVKGVLDKNMRASFFHYLKEMERLGYENKYEILNAIEFGIPQKRERIFV 177
Query: 174 LAKRKPLSFRCQLLNNQLLRSPSPLLGND 202
++ SF L R S L D
Sbjct: 178 VSILGNNSFDFAKLEKTQTRDISEFLEKD 206
>gi|124512074|ref|XP_001349170.1| modification methylase-like protein, putative [Plasmodium
falciparum 3D7]
gi|23498938|emb|CAD51016.1| modification methylase-like protein, putative [Plasmodium
falciparum 3D7]
Length = 706
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 22/129 (17%)
Query: 57 GHRPYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPH 116
G +Q N+ N+ EL+ Y D R SF+ I L+
Sbjct: 229 GDENHQFNVDNINIDELNNYIY-------------------NDKDERTKSFIHICTLLTK 269
Query: 117 T--VKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 174
P +F+ENV FE S + + + N +Y Q ++LSPLQFG+P R R++C+
Sbjct: 270 VDFKNLPEYIFIENVKNFELSSSFIYFLYCIKN-NYSFQTYLLSPLQFGIPNERLRFYCI 328
Query: 175 AKRKPLSFR 183
K+K F+
Sbjct: 329 CKKKNYDFK 337
>gi|323486195|ref|ZP_08091524.1| cytosine-specific methyltransferase [Clostridium symbiosum
WAL-14163]
gi|323400521|gb|EGA92890.1| cytosine-specific methyltransferase [Clostridium symbiosum
WAL-14163]
Length = 382
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 147/387 (37%), Gaps = 96/387 (24%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+++R ++ ++GIGGMR + +A + V + + N + Y NFG +P +G+I + A
Sbjct: 53 DSFRFIDLFAGIGGMRIAYERA--GGKCVYSSEWNKYSQQTYFANFGEQP-EGDITQVEA 109
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFS---------FLKILELIPHTVKP 120
++ H L++ PCQP++ G+ K++S RA F + ++ K
Sbjct: 110 EDIP---DHDILVAGFPCQPFSIAGVSKKNSLGRATGFEDKTQGTLFFDVCRILKQ--KR 164
Query: 121 PHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPL--QFGVPYSRPRYFCLAKRK 178
P +ENV + D I + + L E + L Q VP R R + +
Sbjct: 165 PKAFMLENVKNLCSHDRGRTFKVITESLNELNYEVFYAVLDGQNFVPQHRERIIIVGFDR 224
Query: 179 PLSFRCQLLNNQLLRS-PSPLLGND-DMTVITKHDQPDDSWDKLLESCDPVERFLEFSNS 236
+ + ++ + P P++ + D V K+ D W L
Sbjct: 225 ERYGQDIKFDFEITPAIPKPVMKDILDKKVDEKYTLSDKLWIYL---------------- 268
Query: 237 GDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDS 296
+ + AA + FG + + PL + R SA
Sbjct: 269 -------QSYAAKHKAAGNGFG---------------YGIAPLDGVSRTISA-------- 298
Query: 297 KRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQF 356
RY K +L + KN R TPRE A L FP DF+
Sbjct: 299 -----------RYYKDGSEILINQRGKNP-----------RRLTPRECARLQGFPEDFKI 336
Query: 357 PHHLSLRQRYALLGNSLSIAVVAPLLQ 383
P +S Q Y GNS VV PL++
Sbjct: 337 P--VSDTQAYRQFGNS----VVVPLME 357
>gi|290969050|ref|ZP_06560585.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
gi|290781006|gb|EFD93599.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
Length = 333
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAF--DINDKANDVYELNFGHRPYQGNIQNLTA 70
+R ++ ++GIGG+R +A A++ F + N K+ + Y NFG + ++TA
Sbjct: 2 YRAIDLFAGIGGIRLGFEQA-FGAEMTTVFTSEWNKKSQETYLANFGEEIHI--FGDITA 58
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ H LL+ PCQ ++ G ++ D R F + ++ + P ++F ENV
Sbjct: 59 IDERNIPPHDILLAGFPCQAFSLAGKKRGFEDTRGTLFFDVARIVNY--HKPKVVFCENV 116
Query: 130 ---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK---PLSFR 183
V + T + + L + Y +L+ FGVP +R R + +A R+ P +FR
Sbjct: 117 KNLVNHDRGKTFKIINQTLQDLGYTVFHNVLNSKDFGVPQNRERIYIVAFREDIAPNTFR 176
>gi|289423000|ref|ZP_06424820.1| modification methylase ScrFIB [Peptostreptococcus anaerobius 653-L]
gi|289156574|gb|EFD05219.1| modification methylase ScrFIB [Peptostreptococcus anaerobius 653-L]
Length = 329
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 31/209 (14%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA----NDVYELNFG-------HR 59
E +++E + GIG +R + ++ + QV++ +I+ N +Y NF H
Sbjct: 16 ETIKIIELFGGIGAIRKAFIRQKIPHQVIDYVEIDKNCVKSYNALYNTNFKPKSILYFHP 75
Query: 60 PYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPH 116
P + +L M+G+ PCQ ++R GL+K + S R+ + + +I
Sbjct: 76 PDE-------KIDLLMHGS-------PCQDFSRSGLKKGGTKGSGTRSSLLFETIRIIEE 121
Query: 117 TVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFC 173
P ++ ENV G + A L + L E IL+ ++FG+P R R F
Sbjct: 122 MKIRPKIVLWENVKGVLDKNMRASFFHYLKEMERLGYENKYEILNAIEFGIPQKRERIFV 181
Query: 174 LAKRKPLSFRCQLLNNQLLRSPSPLLGND 202
++ SF L R S L D
Sbjct: 182 VSILGNNSFDFAKLEKTQTRDISEFLEKD 210
>gi|157414453|ref|YP_001481709.1| hypothetical protein C8J_0133 [Campylobacter jejuni subsp. jejuni
81116]
gi|283955585|ref|ZP_06373079.1| hypothetical protein C1336_000030018 [Campylobacter jejuni subsp.
jejuni 1336]
gi|157385417|gb|ABV51732.1| hypothetical protein C8J_0133 [Campylobacter jejuni subsp. jejuni
81116]
gi|283792928|gb|EFC31703.1| hypothetical protein C1336_000030018 [Campylobacter jejuni subsp.
jejuni 1336]
Length = 321
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 15/196 (7%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ 66
N+ + + ++ ++GIGG+R + V + +I+ A Y NF P+ G+I
Sbjct: 3 NNTKKLKAIDLFAGIGGIRIGFKNIFQEKLEFVFSSEIDKFACQTYFCNFNELPH-GDIT 61
Query: 67 NLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
+ + H LL+ PCQ ++ G +K +D R F + ++ P ++F
Sbjct: 62 QINENNIP---KHNILLAGFPCQAFSIAGHRKGFNDIRGTLFFDVARIVKK--HKPEIVF 116
Query: 126 VENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA----KRK 178
+ENV GF+ D T + + L + Y +L+ FG+P +R R + +A K K
Sbjct: 117 LENVKGFKNHDKGKTFSVVKNTLEDMGYDVFSEVLNARNFGIPQNRERIYIVAFLKNKFK 176
Query: 179 PLSFRCQLLNNQLLRS 194
+SF L N ++S
Sbjct: 177 NISFNFNELKNIEIKS 192
>gi|428299006|ref|YP_007137312.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
gi|428235550|gb|AFZ01340.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
Length = 438
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 152/396 (38%), Gaps = 68/396 (17%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-GNIQNLTAAEL 73
V+ + GIGG+ A +V A D N K ++Y+ NF +I +TA E+
Sbjct: 9 VVSLFCGIGGLDLGFQSAGF--EVAIAIDNNPKVLELYQNNFPDTTVLCKDIGEITATEI 66
Query: 74 ---------DMYGAHAWLLS-PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHM 123
D G A ++ PPCQ ++ G QK D R LK + L+ P M
Sbjct: 67 RDIIQHKYQDWDGEIAAVIGGPPCQGFSVAGKQKLDDD-RNQLVLKFINLVIEL--NPSM 123
Query: 124 LFVENVVGFETSDTHAKMIEILANS------DYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
+ENV E K I N+ Y+ +++L+ +GVP R R + +
Sbjct: 124 FVMENVPAIE----WKKFAGITGNAIALIEEQYILSKWLLTASDYGVPQKRQRAIWIGSK 179
Query: 178 -----KPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLE 232
PL ++ + D++ I + Q D+W+ L E E
Sbjct: 180 FGEVIPPLESDKKVTVGDAI---------SDLSYIPINSQ-TDTWE-LGEKG-------E 221
Query: 233 FSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIV 292
++ D++ T T + D +++++ + H +A
Sbjct: 222 YAEYLDKIFTSTLRRRLRAGRLSDHPCVSKSLDISGFQATVH-----------TAATQQK 270
Query: 293 YPDSKRCCCFTKSY-YRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFP 351
Y D+K + ++ YR V S N+ A + +H R T RE A LHSFP
Sbjct: 271 YTDTKPGEKESTTWAYRLVSDGFSPTLRAGSGNRTAARPIHYEHARVITVREAARLHSFP 330
Query: 352 GDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
F F S + +GNS V PLL Y A
Sbjct: 331 DWFDF--GTSKLAAHKAIGNS-----VPPLLAYAIA 359
>gi|313892290|ref|ZP_07825883.1| modification methylase HpaII [Dialister microaerophilus UPII 345-E]
gi|313119428|gb|EFR42627.1| modification methylase HpaII [Dialister microaerophilus UPII 345-E]
Length = 329
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 13/176 (7%)
Query: 13 WRVLEFYSGIGGMRYSL---MKADVSAQVVEAFDINDKANDVYELNFGHR-PYQGNIQNL 68
++ ++ ++GIGG+R K ++ V +D KA + Y NF +G+I
Sbjct: 2 YKSIDLFAGIGGIRLGFEQAFKNEIKTVFVSEWD--KKAQETYRANFKDDIEIRGDIN-- 57
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
T E D+ + L PCQ ++ G +K DAR F + ++ + P ++F EN
Sbjct: 58 TIDEKDIPKHNILLAGFPCQAFSLAGQKKGFEDARGTLFFSVAKIAEY--HKPEVIFCEN 115
Query: 129 VVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
V D T + IL + Y IL+ FGVP +R R + +A R +S
Sbjct: 116 VKNLLNHDKGRTFKVIKNILVDLGYTVFYKILNSKNFGVPQNRERIYIVAFRNDIS 171
>gi|420404369|ref|ZP_14903552.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6261]
gi|393018248|gb|EJB19399.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6261]
Length = 434
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 14 RVLEFYSGIGGMRYSLMKADVS----AQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
R ++ ++G+GG+R +A S +Q + + +I A Y +F P QG+I +
Sbjct: 30 RFVDLFAGLGGLRLGFEQASSSIGLKSQCILSSEIKKSALQAYTDHFKETP-QGDITQIN 88
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
++ + L PCQP++ G ++ D R F +I+ + K P +ENV
Sbjct: 89 TNDIPNF--DVLLAGFPCQPFSNAGKRRGLDDTRGTLFFEIMRFL--LAKKPRGFLLENV 144
Query: 130 VGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
G T D T + M+ L Y +L+ FGV +R R + +
Sbjct: 145 PGLLTHDKGKTFSIMLSHLKECGYFVNYKLLNAKDFGVAQNRERLYIVG 193
>gi|385249206|ref|YP_005777425.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter
pylori F57]
gi|387908011|ref|YP_006338345.1| DNA-cytosine methyltransferase [Helicobacter pylori XZ274]
gi|317182001|dbj|BAJ59785.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter
pylori F57]
gi|387572946|gb|AFJ81654.1| DNA-cytosine methyltransferase [Helicobacter pylori XZ274]
Length = 434
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 14 RVLEFYSGIGGMRYSLMKADVS----AQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
R ++ ++G+GG+R +A S +Q + + +I A Y +F P QG+I +
Sbjct: 30 RFVDLFAGLGGLRLGFEQASSSIGLKSQCILSSEIKKSALQAYTDHFKETP-QGDITQIN 88
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
++ + L PCQP++ G ++ D R F +I+ + K P +ENV
Sbjct: 89 TNDIPNF--DVLLAGFPCQPFSNAGKRRGLDDTRGTLFFEIMRFL--LAKKPRGFLLENV 144
Query: 130 VGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
G T D T + M+ L Y +L+ FGV +R R + +
Sbjct: 145 PGLLTHDKGKTFSIMLSHLKECGYFVNYKLLNAKDFGVAQNRERLYIVG 193
>gi|221052431|ref|XP_002257791.1| modification methylase-like protein [Plasmodium knowlesi strain H]
gi|193807622|emb|CAQ38127.1| modification methylase-like protein, putative [Plasmodium knowlesi
strain H]
Length = 749
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 52/256 (20%)
Query: 101 DARAFSFLKILELIPHTVKP--PHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILS 158
D R+ SF+ I L+ + + P +F+ENV FE S + I + +Y Q ++LS
Sbjct: 287 DERSRSFIHICNLLKNVKEENLPKYIFIENVRNFELSTSFFYFINSVK-ENYNFQTYLLS 345
Query: 159 PLQFGVPYSRPRYFCLAKRK------------PLSFRCQLLNNQLLRSPSPLLGNDDMTV 206
PLQ+G+P R R++C+ +RK + L +N L+ + + ++
Sbjct: 346 PLQYGIPNERLRFYCICRRKHKLADLTSGESFTSGWTTSLYSNSLMPAKCIMPAFENNAN 405
Query: 207 ITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEV 266
+ L D E++ N+ +++N L+ GT ++++ + T+E
Sbjct: 406 FRPSQRYSFYTPSLATFLDHNEKYEITCNTNEEIN-----LTNGT--LEEYQVSNSTLE- 457
Query: 267 DRCVSIDHFLVPLSLIERWGSAM-------------------------DIVYPDSKRCCC 301
+C S F + I R G+ D++ ++ C
Sbjct: 458 -KCSS---FCFDMIDINRNGNVCCFEGGRYYVEKSETIKDLPNEKNLKDLINSNNLHSMC 513
Query: 302 FTKSYYRYVKGTGSLL 317
FT +Y RY+ G+GS+L
Sbjct: 514 FTSNYGRYINGSGSVL 529
>gi|166237008|gb|ABY86226.1| BsaHI DNA methyltransferase [Geobacillus stearothermophilus]
Length = 323
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
RV++ ++G GGM A ++V AF+ A +VY+ NF H + ++ N+ +
Sbjct: 2 RVIDLFAGCGGMSKGFENA--GYEIVAAFENWKDAIEVYKKNFKHPVIEYDLSNVEDYNI 59
Query: 74 -DMYGAHAWLLSPPCQPYTRQGLQKQSSDAR-AFSFLKILELIPHTVKPPHMLFVENVVG 131
+ + PPCQ Y+ G +K+ +A F I+ VKP + L +ENV
Sbjct: 60 FKQFKPDMIIGGPPCQDYSSAGKRKEDENANLTIDFANIIA----NVKPKYFL-MENVDQ 114
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 174
+ + + K +EI + Y IL GVP R R+F
Sbjct: 115 IKKYNAYHKAVEIFRKAGYGLSAKILDASLCGVPQKRKRFFLF 157
>gi|376287512|ref|YP_005160078.1| DNA (cytosine-5-)-methyltransferase [Corynebacterium diphtheriae
BH8]
gi|371584846|gb|AEX48511.1| DNA (cytosine-5-)-methyltransferase [Corynebacterium diphtheriae
BH8]
Length = 393
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 11/182 (6%)
Query: 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
G +R ++ ++GIGG+R + + + V A + + A Y NFG P QG+I +
Sbjct: 81 GAKYRSIDLFAGIGGIRLGFEQTN-QVRTVFASEWDKFAQKTYRANFGEVP-QGDITQID 138
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D+ L PCQ +++ G + +D R F + +I K P +ENV
Sbjct: 139 --EKDVPDHDILLAGFPCQAFSQAGRKLGFNDTRGTLFFDVARIIKE--KRPKAFLLENV 194
Query: 130 VGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
++ D H + +++ + +Y + FG P +R R + + K L F
Sbjct: 195 KNLKSHD-HGRTFKVIQKTLEELEYDLHVMLFKARDFGAPQNRERIYLVGFDKNLDFSLP 253
Query: 186 LL 187
L
Sbjct: 254 FL 255
>gi|300813374|ref|ZP_07093725.1| Modification methylase HpaII [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300512517|gb|EFK39666.1| Modification methylase HpaII [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 347
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 13 WRVLEFYSGIGGMRYSLMKA---DVSAQVVEAFDINDKANDVYELNFGHRPYQ-GNIQNL 68
++ ++ ++GIGG+R +A D+ V +D KA + Y NFG +P G+I +
Sbjct: 2 FKSIDLFAGIGGIRLGFDQAFGNDIETVFVSEWD--KKAQETYIANFGEKPKIFGDITKI 59
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
E+D+ L PCQ ++ G +K D R F + ++ P ++F EN
Sbjct: 60 D--EIDIPIHDILLAGFPCQAFSLAGQKKGFEDTRGTLFFDVARIVE--FHKPKVVFCEN 115
Query: 129 V---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
V V + T + + L + Y +++ FGVP +R R + +A R+ +S
Sbjct: 116 VKNLVNHDRGKTFKIIKKTLNDLGYRVFYKVINSKDFGVPQNRERIYIVAFREDIS 171
>gi|205374924|ref|ZP_03227716.1| DNA-cytosine methyltransferase [Bacillus coahuilensis m4-4]
Length = 323
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA-AE 72
RV++ +SG GGM SL + ++V AF+ D+A D+Y NF H + ++ ++ +
Sbjct: 2 RVIDLFSGCGGM--SLGFQNAGFEIVSAFENWDEAIDIYRKNFQHPICKYDLSDVKDYND 59
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
+ PPCQ Y+ G +K+ ++A + I VKP + L +ENV
Sbjct: 60 FSKLNPDIIIGGPPCQDYSSAGKRKEEANA---NLTTDYANIIANVKPKYFL-MENVDQI 115
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
+ + + +EI + Y IL GVP R R+F +
Sbjct: 116 KKYSVYLRAVEIFKEAGYGLSAKILDASLCGVPQKRKRFFLFGE 159
>gi|91213886|ref|YP_543872.1| hypothetical protein UTI89_C4938 [Escherichia coli UTI89]
gi|110644679|ref|YP_672409.1| modification methylase [Escherichia coli 536]
gi|191170832|ref|ZP_03032384.1| modification methylase HgiDII [Escherichia coli F11]
gi|300974517|ref|ZP_07172633.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1]
gi|386606922|ref|YP_006113222.1| DNA-cytosine methyltransferase [Escherichia coli UM146]
gi|422366411|ref|ZP_16446879.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 153-1]
gi|422377725|ref|ZP_16457960.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 60-1]
gi|432443967|ref|ZP_19686287.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE189]
gi|432444295|ref|ZP_19686608.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE191]
gi|432454611|ref|ZP_19696824.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE201]
gi|432469689|ref|ZP_19711743.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE206]
gi|432516593|ref|ZP_19753803.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE224]
gi|432571672|ref|ZP_19808168.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE55]
gi|432653865|ref|ZP_19889596.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE87]
gi|432701721|ref|ZP_19936859.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE169]
gi|432716220|ref|ZP_19951239.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE8]
gi|432748179|ref|ZP_19982835.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE43]
gi|432988209|ref|ZP_20176908.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE215]
gi|432993425|ref|ZP_20182049.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE218]
gi|433012735|ref|ZP_20201117.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE104]
gi|433022308|ref|ZP_20210333.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE106]
gi|433061115|ref|ZP_20248102.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE124]
gi|433076824|ref|ZP_20263389.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE131]
gi|433100073|ref|ZP_20286184.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE145]
gi|433118431|ref|ZP_20304182.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE153]
gi|433142922|ref|ZP_20328102.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE168]
gi|433197111|ref|ZP_20381039.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE94]
gi|433327076|ref|ZP_20403659.1| DNA-cytosine methyltransferase [Escherichia coli J96]
gi|91075460|gb|ABE10341.1| hypothetical protein UTI89_C4938 [Escherichia coli UTI89]
gi|110346271|gb|ABG72508.1| modification methylase [Escherichia coli 536]
gi|190909056|gb|EDV68643.1| modification methylase HgiDII [Escherichia coli F11]
gi|300308872|gb|EFJ63392.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1]
gi|307629406|gb|ADN73710.1| DNA-cytosine methyltransferase [Escherichia coli UM146]
gi|315290903|gb|EFU50272.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 153-1]
gi|324010993|gb|EGB80212.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 60-1]
gi|430960119|gb|ELC78286.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE189]
gi|430977377|gb|ELC94218.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE191]
gi|430986963|gb|ELD03525.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE201]
gi|431000237|gb|ELD16305.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE206]
gi|431036777|gb|ELD47766.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE224]
gi|431113151|gb|ELE16832.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE55]
gi|431186073|gb|ELE85648.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE87]
gi|431238754|gb|ELF33409.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE169]
gi|431249948|gb|ELF44102.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE8]
gi|431288452|gb|ELF79215.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE43]
gi|431491428|gb|ELH71034.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE215]
gi|431512402|gb|ELH90526.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE218]
gi|431535562|gb|ELI11902.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE104]
gi|431540917|gb|ELI16370.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE106]
gi|431562253|gb|ELI35566.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE124]
gi|431600852|gb|ELI70517.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE131]
gi|431622501|gb|ELI91191.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE145]
gi|431626909|gb|ELI95324.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE153]
gi|431666881|gb|ELJ33505.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE168]
gi|431725573|gb|ELJ89421.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE94]
gi|432345091|gb|ELL39614.1| DNA-cytosine methyltransferase [Escherichia coli J96]
Length = 348
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 16/175 (9%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLTAAEL 73
V++F+ G GG L +A ++ DI+ +A++ ++ NF + Q +I+ + ++
Sbjct: 3 VIDFFCGCGGASEGLRQAGFDIEL--GLDIDQQASETFKANFPDAKFIQDDIRKIEPQDI 60
Query: 74 ----DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
D+ LLS PCQP+++Q K S D+R + I + P + +E
Sbjct: 61 SDIIDIKAKRPLLLSACAPCQPFSQQNKNKTSDDSRRNLLNETHRFIRELL--PEYIMLE 118
Query: 128 NVVGFETSDTHA-----KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
NV G + D + I++L +Y FI + +G+P R R LA R
Sbjct: 119 NVPGMQKIDEEKEGPFQEFIKLLKELEYNYISFIANAENYGIPQRRKRLVLLASR 173
>gi|425469988|ref|ZP_18848876.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9701]
gi|389880133|emb|CCI39083.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9701]
Length = 407
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 6/168 (3%)
Query: 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
G ++ ++G GG+ KA + +V AFD A DVY NF H + ++ +
Sbjct: 93 GSKMITIDLFAGCGGLSLGFQKAGFT--IVAAFDNWIPAIDVYSNNFSHPIFNVDLSRES 150
Query: 70 AAE-LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
E L Y + SPPCQ ++ G ++ RA L E++ T P +EN
Sbjct: 151 NQEILAQYNPEIIVGSPPCQDFSSAG-KRDEGLGRANLTLTFAEIV--TRVSPQWFVMEN 207
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
V E S + +I + Y +++ GVP +R RYF + K
Sbjct: 208 VDRIEKSKILTQAKQIFKSHGYGLTGKVINSCYCGVPQTRKRYFLIGK 255
>gi|408356769|ref|YP_006845300.1| modification methylase [Amphibacillus xylanus NBRC 15112]
gi|407727540|dbj|BAM47538.1| modification methylase [Amphibacillus xylanus NBRC 15112]
Length = 416
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 20/183 (10%)
Query: 3 KDMCKNDGEAWRVLEF---YSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR 59
KD K + VL+F ++GIGG+R D + V + + + A YE N+G +
Sbjct: 88 KDRDKKTQSKFNVLKFIDLFAGIGGIRKGF--EDEFTKCVFSSEWDKYAVKTYEANYGEK 145
Query: 60 PYQGNIQNLTAAELDMYGAHAWLLSPPCQPYT----RQGLQKQSSDARAFSFLKILELIP 115
P+ G+I + E D+ L PCQP++ R+G ++ F L+IL+
Sbjct: 146 PH-GDITKIN--EKDIPDHDVLLAGFPCQPFSHIGKREGFAHETQGTLFFDVLRILK--- 199
Query: 116 HTVKPPHMLFVENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYF 172
K P M +ENV G T+D T ++E L + Y +L FG+P R R
Sbjct: 200 --EKEPKMFLLENVKGLLTNDNGETFRIILENLKSLGYSVFYEVLDAQDFGLPQRRERVL 257
Query: 173 CLA 175
+
Sbjct: 258 IVG 260
>gi|348590515|ref|YP_004874977.1| DNA-cytosine methyltransferase [Taylorella asinigenitalis MCE3]
gi|347974419|gb|AEP36954.1| DNA-cytosine methyltransferase [Taylorella asinigenitalis MCE3]
gi|399116677|emb|CCG19485.1| cytosine-specific methyltransferase [Taylorella asinigenitalis
14/45]
Length = 333
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 11/177 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLTA 70
+ ++ ++GIGG+R +A + V A +I+ A Y NF + G++
Sbjct: 2 YSSIDLFAGIGGIRLGFEQAFGEKLKTVYASEIDSNAVKTYVSNFSSKKIIHGDVTKEVE 61
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
A++ AH +LL+ PCQ ++ G + DAR F + +I P ++F ENV
Sbjct: 62 ADIP---AHDFLLAGFPCQAFSAAGRKMGFDDARGTLFFDVARIIK--FHKPKVVFAENV 116
Query: 130 ---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
V + T ++ +L Y +L+ FGVP +R R + +A R+ L R
Sbjct: 117 KNLVNHDKGTTFKIILNVLKELGYEVFFQVLNSKNFGVPQNRERIYIVAFRENLGIR 173
>gi|24527986|emb|CAD33713.1| putative DNA methylase [Escherichia coli]
Length = 310
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 9/170 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V+ +SG GG+ L ++ + ++ A DI + A D Y+ N G G+I N+ ++
Sbjct: 2 KVVSLFSGAGGLDLGLKQSGLD--IIWANDIYEDAVDTYKRNIGEHIVLGDIANINSS-- 57
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
D+ + PCQ ++ + ++S D R +L+++ +I K P ENV G
Sbjct: 58 DIPNCDVVVGGFPCQGFSVANMNRKSEDPRNKLYLEMVRIIRD--KRPAYFIAENVKGIL 115
Query: 134 TSDTHAKMIEILANSD---YLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
+ D + +I ++ + Y + +L+ +GVP +R R L RK L
Sbjct: 116 SLDKGLVIQKITSDFESLGYNVKYSLLNCADYGVPQTRMRVIILGVRKDL 165
>gi|319893523|ref|YP_004150398.1| DNA-cytosine methyltransferase [Staphylococcus pseudintermedius
HKU10-03]
gi|317163219|gb|ADV06762.1| DNA-cytosine methyltransferase [Staphylococcus pseudintermedius
HKU10-03]
Length = 394
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 13/177 (7%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+++++ ++GIGG R + + + + V + + + + Y+ NFG P G+I + +
Sbjct: 86 YKMIDLFAGIGGTRLGF-QLNGNVKSVFSSEWDKFSQKTYKANFGEIP-AGDITEIKEGD 143
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H L+ PCQ +++ GL++ D R F I +I K P +ENV
Sbjct: 144 IP---NHDILVGGFPCQAFSQAGLKRGFEDTRGTLFFDIARIIKE--KRPKAFLLENVKN 198
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA--KRKPLSFR 183
++ D T++ + + L + DY +L FGVP +R R + + KR+ +R
Sbjct: 199 LKSHDKGKTYSTIEKTLIDLDYAVYPLLLKAKDFGVPQNRERIYIVGFDKRRIKKWR 255
>gi|268610192|ref|ZP_06143919.1| cytosine-specific DNA methylase [Ruminococcus flavefaciens FD-1]
Length = 475
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 31/204 (15%)
Query: 5 MCKNDGEA-WRVLEFYSGIGG----MRYSLMKADVSAQVVEAFDINDKANDVYELNF--G 57
+ + GEA +R ++ ++G+GG MRY + + V A + N + Y+LN+
Sbjct: 50 ITREKGEARFRFIDLFAGVGGFHQAMRY------LGGECVMAAETNQECVKTYKLNYKID 103
Query: 58 HRPYQGNIQNL---TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSD-ARAFSFLKILEL 113
+ +G++ + T A D+ A PCQP+++ G QK D R F KI+++
Sbjct: 104 EKEVRGDVNKIDPETIAPFDVLCA-----GFPCQPFSKAGAQKGFKDETRGNLFYKIMDI 158
Query: 114 IPHTVKPPHMLFV--ENVVGFETSDTHAKMI--EILANSDYLTQE-FILSPLQFGVPYSR 168
+ P + F+ ENV + +I E+ + Y+T+ ILSP FG+P R
Sbjct: 159 LDGH---PEVKFIILENVRNLADKTENWDIITTELTKRNFYITETPIILSPSDFGIPQIR 215
Query: 169 PRYFCLAKRKPLSFRCQLLNNQLL 192
R + L R+ + + Q+L N +
Sbjct: 216 ERVYILGIRRDIRNQ-QILTNGFI 238
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 332 KEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQA 389
+++H RY TPRE ANL SF F+F ++ +Y LGNS+++ ++ L + LF A
Sbjct: 410 QKEHFRYITPREAANLQSFHASFKFQGTDAI--KYRQLGNSVNVRILKILGESLFNLA 465
>gi|335049000|ref|ZP_08542011.1| modification methylase HpaII [Megasphaera sp. UPII 199-6]
gi|333764445|gb|EGL41839.1| modification methylase HpaII [Megasphaera sp. UPII 199-6]
Length = 333
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAF--DINDKANDVYELNFGHRPYQGNIQNLTA 70
+R ++ ++GIGG+R +A A++ F + N K+ + Y NFG + ++TA
Sbjct: 2 YRAIDLFAGIGGIRLGFEQA-FGAEMTTVFTSEWNKKSQETYLANFGEEIHI--FGDITA 58
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ H LL+ PCQ ++ G ++ D R F + ++ + P ++F ENV
Sbjct: 59 IDEKNIPPHDILLAGFPCQAFSLAGKKRGFEDTRGTLFFDVARIVNY--HKPKVVFCENV 116
Query: 130 ---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK---PLSFR 183
V + T + + L + Y +L+ FGVP +R R + +A R+ P +FR
Sbjct: 117 KNLVNHDRGKTFKIINQTLQDLGYKVFHKVLNSKDFGVPQNRERIYIVAFREDIAPNTFR 176
>gi|219870523|ref|YP_002474898.1| Type II modification methyltransferase HpaII/DNA
(cytosine-5-)-methyltransferase [Haemophilus parasuis
SH0165]
gi|219690727|gb|ACL31950.1| Type II modification methyltransferase HpaII/DNA
(cytosine-5-)-methyltransferase [Haemophilus parasuis
SH0165]
Length = 350
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 20/179 (11%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNI-----QN 67
+ ++ ++G GG R ++ K + V + +I++ A Y NFG +PY G+I +
Sbjct: 26 FTFIDLFAGFGGFRLAMEK--LGGYCVFSSEIDENAQKTYATNFGEKPY-GDITLEETKR 82
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
L D+ A PCQ ++ G + D R F ++ E+I P F+E
Sbjct: 83 LIPTTFDILCA-----GFPCQAFSIAGKRGGFEDTRGTLFFEVAEIIRR--HQPKAFFLE 135
Query: 128 NVVGFETSDTHAKMIEIL----ANSDYLTQE-FILSPLQFGVPYSRPRYFCLAKRKPLS 181
NV G + D + IL + +Y + IL+ FGVP +R R F + R+ L+
Sbjct: 136 NVKGLSSHDKGRTLSTILNVLREDLNYFVPDPKILNAKDFGVPQNRERIFIVGFRQDLA 194
>gi|296126560|ref|YP_003633812.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563]
gi|296018376|gb|ADG71613.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563]
Length = 311
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+R ++ ++G+GG + S V A +I+ A + Y+LNF +G+I +
Sbjct: 2 YRFIDLFAGVGGFHLAFN----SENCVFASEIDINARETYKLNFPDTVLEGDITEIDEKN 57
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H L + PCQP++ G +K D R F I +I + P + +ENV
Sbjct: 58 I---PEHDILCAGFPCQPFSVAGYRKGFDDTRGTLFFDIARIIKY--HKPKAILLENVKN 112
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQF-GVPYSRPRYFCLAKRKPLSFRCQLL 187
E D T +I L N +Y +L+ ++ +P +R R F A K C
Sbjct: 113 LENHDNGNTLKTIINTLRNLNYYVSYKVLNSAEYSNIPQNRERIFIAAFSKEKV--CSYS 170
Query: 188 NNQLLRSPSPLLGNDDMTVITKHDQPDDSW 217
N + P P+ + H++ DD +
Sbjct: 171 N---FKFPEPVELTKTIHDFIDHEKQDDIY 197
>gi|428317977|ref|YP_007115859.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
gi|428241657|gb|AFZ07443.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
Length = 439
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 16/170 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
R ++ +SGIGGMR + A ++ + V + +IN A VY+ NF P G+I+
Sbjct: 16 RFIDLFSGIGGMRLAFESAARSLNLETECVLSSEINPDAQLVYQKNFADTPL-GDIR--- 71
Query: 70 AAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
+D H LL+ PCQ ++ G ++ D R F +I LI T KP +F EN
Sbjct: 72 --LIDKLPEHEILLAGFPCQSFSYAGKKEGFGDTRGTLFFEIARLI-DTFKPQAFIF-EN 127
Query: 129 VVGFETSDTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
V G + D + I + + Y F+L+ F +P +R R + +
Sbjct: 128 VRGLVSHDGGRTLETIKGEIKSRGYSFDYFLLNSSNFSLPQNRVRVYLVG 177
>gi|365128252|ref|ZP_09340537.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum sp.
4_3_54A2FAA]
gi|363623289|gb|EHL74413.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum sp.
4_3_54A2FAA]
Length = 386
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 147/390 (37%), Gaps = 103/390 (26%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++ ++GIGGMR + +A V + + N + Y NFG +P G+I + A +
Sbjct: 57 IDLFAGIGGMRIAFEQA--GGHCVYSNEWNKYSQQTYFANFGDQP-DGDITKVDAGTIP- 112
Query: 76 YGAHAWLLSP-PCQPYTRQGLQKQSSDARA------------FSFLKILELIPHTVKPPH 122
H L++ PCQP++ G+ K+ S RA F +IL+ K P
Sbjct: 113 --DHDILVAGFPCQPFSIAGVSKKQSLGRATGFEDKTQGTLFFDVCRILK-----AKRPK 165
Query: 123 MLFVENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA--KR 177
+ENV + D T + E L DY ++ F VP R R + ++
Sbjct: 166 AFLLENVKNLCSHDRGRTFKVICEALDELDYEVFYQVIDGQAF-VPQHRERILIVGFDRK 224
Query: 178 KPLSFRCQLLNNQLLRSPSPLLGNDDMTVIT--KHDQPDDSWDKLLESCDPVERFLEFSN 235
+ L Q N + + P P++ D + T K+ D W+ L +
Sbjct: 225 RYLPEEMQFKFNIIPKEPKPVM-RDILEAETDEKYTLSDKLWNYLQD------------- 270
Query: 236 SGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPD 295
+ + AA + FG + L P+ + R SA
Sbjct: 271 ----------YAAKHKAAGNGFG---------------YGLAPVDGVSRTLSA------- 298
Query: 296 SKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQ 355
RY K +L + + KN R TPRE A L FP F+
Sbjct: 299 ------------RYYKDGSEILISQKNKNP-----------RRLTPRECARLQGFPDTFK 335
Query: 356 FPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
P +S Q Y GNS+ + ++A + + +
Sbjct: 336 IP--VSDTQAYKQFGNSVVVPLMAAVAKLM 363
>gi|350272701|ref|YP_004884009.1| cytosine-specific methyltransferase [Oscillibacter valericigenes
Sjm18-20]
gi|348597543|dbj|BAL01504.1| cytosine-specific methyltransferase [Oscillibacter valericigenes
Sjm18-20]
Length = 384
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 12/161 (7%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
V+ +SG+GG+ + + ++ A DI+ A + Y+LNFGH +G+I N++ D
Sbjct: 10 VVSLFSGLGGLDLGFVWEGFN--IIWASDISSNATETYKLNFGHEAIRGDILNVSLN--D 65
Query: 75 MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET 134
+ A + PPCQ ++ G ++ D R + L+++ H + P + +ENV G
Sbjct: 66 IPKADVVIGGPPCQSFSLVG-KRNPDDIRGQLVFRYLDVVKHLM--PKVFVMENVPGLAA 122
Query: 135 SDTHAK-----MIEILANSDYLTQEFILSPLQFGVPYSRPR 170
S + K +I+ Y L + VP R R
Sbjct: 123 SKINKKRLTDILIDEYTQLGYKVTRMDLVATDYLVPQKRKR 163
>gi|257061088|ref|YP_003138976.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|256591254|gb|ACV02141.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 331
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 14/172 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG--NIQNL 68
+ ++ ++ ++GIGG R + +A Q V + +IN+ VY NF P I
Sbjct: 4 KPFKFIDLFAGIGGFRLAFEQA--QYQCVYSCEINEYCQKVYYNNFDECPDNDVTQINPD 61
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
T + D+ A PCQP++ G +K +D R F I ++I K P + +EN
Sbjct: 62 TLPDFDVLTA-----GFPCQPFSICGKKKGFNDTRGTLFFYICQII--AAKQPQAVILEN 114
Query: 129 V---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
V + + T +I L + +YL +L+ FGVP R R +A R
Sbjct: 115 VKHLIHHQQGKTLETIIYALEDLEYLVDYQLLNAKDFGVPQHRERIVIIATR 166
>gi|127464|sp|P11408.1|MTM1_MORSP RecName: Full=Modification methylase MspI; Short=M.MspI; AltName:
Full=Cytosine-specific methyltransferase MspI
gi|44539|emb|CAA32393.1| unnamed protein product [Moraxella sp.]
Length = 418
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 19/171 (11%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ +SGIGG+R S + V + +I+ A Y NFG P+ ++T E
Sbjct: 105 FKFIDLFSGIGGIRQSFEVN--GGKCVFSSEIDPFAKFTYYTNFGVVPFG----DITKVE 158
Query: 73 LDMYGAHAWLLSP-PCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
H L + PCQP++ R+G + + ++I+E T K P +LF+E
Sbjct: 159 ATTIPQHDILCAGFPCQPFSHIGKREGFEHPTQGTMFHEIVRIIE----TKKTP-VLFLE 213
Query: 128 NVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
NV G D T +IE L + Y +L FG+P R R++ +A
Sbjct: 214 NVPGLINHDDGNTLKVIIETLEDMGYKVHHTVLDASHFGIPQKRKRFYLVA 264
>gi|148826843|ref|YP_001291596.1| modification methylase HaeII [Haemophilus influenzae PittGG]
gi|148718085|gb|ABQ99212.1| modification methylase HaeII [Haemophilus influenzae PittGG]
Length = 318
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 12/176 (6%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ ++GIGG+R + V + + + A +YE+NFG +P+ G+I +++
Sbjct: 2 KEYKTIDLFAGIGGIRLGF--EAFGCKNVFSSEWDKYAQSMYEVNFGEKPF-GDINDISP 58
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+++ H LL+ PCQP++ G +D R F I ++ K P +ENV
Sbjct: 59 SDIP---DHDILLAGFPCQPFSIAGKGLGFADTRGTLFFNIEAIL--KAKKPKAFLLENV 113
Query: 130 VGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
T D T + + L Y +L+ L FG+P R R + + L F
Sbjct: 114 KRLTTHDNGNTFKVINDKLNKLGYTVYHKVLNTLDFGLPQKRERIYIVGFLDKLHF 169
>gi|260591129|ref|ZP_05856587.1| modification methylase AluI [Prevotella veroralis F0319]
gi|260536994|gb|EEX19611.1| modification methylase AluI [Prevotella veroralis F0319]
Length = 452
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 10/172 (5%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+++ ++ ++G+GG +L K + + V A ++ +YE NF + GNI ++
Sbjct: 8 KSYTFIDLFAGLGGFHLALQK--LGCKCVFASELQTDLQTLYERNFNMK-CSGNINDVNI 64
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDA--RAFSFLKILELIPHTVKPPHMLFVEN 128
+ D+ PCQP+++ G Q+ D R F KI+E++ + P +F+EN
Sbjct: 65 -KTDIPHHDILCGGFPCQPFSQAGKQQGFGDEKDRGNLFYKIMEILEY--HKPEFVFLEN 121
Query: 129 VVGFETSDTHA--KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
V ++ D K+I +S Y + I+SP FG+P+ R R + + + K
Sbjct: 122 VPNLKSHDNKNTYKVIHSQLSSLYEVADDIISPHYFGIPHHRNRMYIVGRLK 173
>gi|68250112|ref|YP_249224.1| modification methylase HaeII [Haemophilus influenzae 86-028NP]
gi|68058311|gb|AAX88564.1| modification methylase HaeII [Haemophilus influenzae 86-028NP]
Length = 318
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 12/176 (6%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ ++GIGG+R + V + + + A +YE+NFG +P+ G+I +++
Sbjct: 2 KEYKTIDLFAGIGGIRLGF--EAFGCKNVFSSEWDKYAQSMYEVNFGEKPF-GDINDISP 58
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+++ H LL+ PCQP++ G +D R F I ++ K P +ENV
Sbjct: 59 SDIP---DHDILLAGFPCQPFSIAGKGLGFADTRGTLFFNIEAIL--KAKKPKAFLLENV 113
Query: 130 VGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
T D T + + L Y +L+ L FG+P R R + + L F
Sbjct: 114 KRLTTHDNGNTFKVINDKLNKLGYTVYHKVLNTLDFGLPQKRERIYIVGFLDKLHF 169
>gi|319776347|ref|YP_004138835.1| cytosine-specific methyltransferase [Haemophilus influenzae F3047]
gi|329123500|ref|ZP_08252064.1| modification methylase HaeII [Haemophilus aegyptius ATCC 11116]
gi|317450938|emb|CBY87164.1| Cytosine-specific methyltransferase [Haemophilus influenzae F3047]
gi|327471082|gb|EGF16537.1| modification methylase HaeII [Haemophilus aegyptius ATCC 11116]
Length = 318
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 12/176 (6%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ ++GIGG+R + V + + + A +YE+NFG +P+ G+I +++
Sbjct: 2 KEYKTIDLFAGIGGIRLGF--EAFGCKNVFSSEWDKYAQSMYEVNFGEKPF-GDINDISP 58
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+++ H LL+ PCQP++ G +D R F I ++ K P +ENV
Sbjct: 59 SDIP---DHDILLAGFPCQPFSIAGKGLGFADTRGTLFFNIEAIL--KAKKPKAFLLENV 113
Query: 130 VGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
T D T + + L Y +L+ L FG+P R R + + L F
Sbjct: 114 KRLTTHDNGNTFKVINDKLNKLGYTVYHKVLNTLDFGLPQKRERIYIVGFLDKLHF 169
>gi|12229852|sp|O30868.1|MTH2_HAEAE RecName: Full=Modification methylase HaeII; Short=M.HaeII; AltName:
Full=Cytosine-specific methyltransferase HaeII
gi|2425087|gb|AAB70829.1| HaeII methylase [Haemophilus aegyptius ATCC 11116]
Length = 318
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 12/176 (6%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ ++GIGG+R + V + + + A +YE+NFG +P+ G+I +++
Sbjct: 2 KEYKTIDLFAGIGGIRLGF--EAFGCKNVFSSEWDKYAQSMYEVNFGEKPF-GDINDISP 58
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+++ H LL+ PCQP++ G +D R F I ++ K P +ENV
Sbjct: 59 SDIP---DHDILLAGFPCQPFSIAGKGLGFADTRGTLFFNIEAIL--KAKKPKAFLLENV 113
Query: 130 VGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
T D T + + L Y +L+ L FG+P R R + + L F
Sbjct: 114 KRLTTHDNGNTFKVINDKLNKLGYTVYHKVLNTLDFGLPQKRERIYIVGFLDKLHF 169
>gi|420413687|ref|ZP_14912810.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|420418627|ref|ZP_14917719.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393028216|gb|EJB29303.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393033453|gb|EJB34516.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 434
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 14 RVLEFYSGIGGMRYSLMKAD----VSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
R ++ ++G+GG+R +A + +Q + + +I A Y +F P QG+I +
Sbjct: 30 RFVDLFAGLGGLRLGFEQASSNIGLKSQCILSSEIKKSALQAYTDHFKETP-QGDITQIN 88
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
++ + L PCQP++ G ++ D R F +I+ + K P +ENV
Sbjct: 89 TNDIPNF--DVLLAGFPCQPFSNAGKRRGLDDTRGTLFFEIMRFL--LAKKPRGFLLENV 144
Query: 130 VGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
G T D T + M+ L Y +L+ FGV +R R + +
Sbjct: 145 PGLLTHDKGKTFSIMLSHLKECGYFVNYKLLNAKDFGVAQNRERLYIVG 193
>gi|384210135|ref|YP_005595855.1| DNA-cytosine methyltransferase [Brachyspira intermedia PWS/A]
gi|343387785|gb|AEM23275.1| DNA-cytosine methyltransferase [Brachyspira intermedia PWS/A]
Length = 323
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 19/209 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
R ++ ++G+GG + S V A +I+ A++ Y+LNF +G+I + ++
Sbjct: 3 RFIDLFAGVGGFHLAFN----SEYCVFASEIDKYASETYKLNFPDTRLEGDITKIDEKDV 58
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
H L + PCQP++ G +K D R F I +I + P + +ENV
Sbjct: 59 ---PEHDILCAGFPCQPFSVAGYRKGFEDVRGTLFFDIARIIKY--HRPKAVLLENVKNL 113
Query: 133 ETSD---THAKMIEILANSDYLTQEFILSPLQF-GVPYSRPRYFCLAKRKPLSFRCQLLN 188
E D T +I +L + +Y IL+ ++ +P +R R F +A K +LN
Sbjct: 114 ENHDNGNTLKTIINVLQDLNYYVCYKILNSAEYSNIPQNRERIFIVAFNKD-----TVLN 168
Query: 189 NQLLRSPSPLLGNDDMTVITKHDQPDDSW 217
+ P P+ + + ++ DD +
Sbjct: 169 YSYFKFPEPVELTNTIHDFIDQEKQDDVF 197
>gi|390942511|ref|YP_006406272.1| DNA-methyltransferase Dcm [Belliella baltica DSM 15883]
gi|390415939|gb|AFL83517.1| DNA-methyltransferase Dcm [Belliella baltica DSM 15883]
Length = 425
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 10/176 (5%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ ++GIGG R + + + V + +++A Y NFG P+ G+I
Sbjct: 100 FKFIDLFAGIGGFRLAFQ--SLGGKCVFTSEWDEQAKKTYYANFGEIPF-GDITKPETKN 156
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
G PCQ ++ G + D R F + E+I K P F+ENV G
Sbjct: 157 FIPDGFDVLCAGFPCQAFSIAGKRGGFEDTRGTLFYDVAEIIKR--KKPKAFFLENVKGL 214
Query: 133 ETSD---THAKMIEILAN--SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
D T + ++ +L N Y+ +++ FGVP +R R F + R L +
Sbjct: 215 VNHDRGRTLSTILNVLRNDLGYYVPDPKVINAKDFGVPQNRERIFIVGFRSDLGIK 270
>gi|425454808|ref|ZP_18834534.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9807]
gi|389804430|emb|CCI16581.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9807]
Length = 405
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 6/163 (3%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE-L 73
++ ++G GG+ KA + +V AFD A DVY NF H + ++ + E L
Sbjct: 98 TIDLFAGCGGLSLGFQKAGFT--IVAAFDNWIPAIDVYRNNFSHPIFNVDLSRESNQEIL 155
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
Y + SPPCQ ++ G ++ RA L E++ T P +ENV E
Sbjct: 156 AQYNPEIIVGSPPCQDFSSAG-KRNEGLGRASLTLTFAEIV--TRVSPQWFVMENVDRIE 212
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
S + +I + Y +++ GVP +R RYF + K
Sbjct: 213 KSKILIQAKQIFKSHGYGLTGKVINSCYCGVPQTRKRYFLIGK 255
>gi|325912423|ref|ZP_08174818.1| modification methylase HhaI [Lactobacillus iners UPII 143-D]
gi|325475765|gb|EGC78936.1| modification methylase HhaI [Lactobacillus iners UPII 143-D]
Length = 314
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 147/365 (40%), Gaps = 86/365 (23%)
Query: 35 SAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSP-PCQPYTRQ 93
AQ V + + + A + Y++NFG P +G+I + + H L + PCQ ++
Sbjct: 11 GAQCVYSSEWDKYAQETYKMNFGDVP-EGDITQIDEKNIP---DHDILCAGFPCQAFSIS 66
Query: 94 GLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANS----D 149
G Q+ D+R F + ++ K P ++F+ENV F T D K + ++ N+
Sbjct: 67 GKQQGFEDSRGTLFFDVARIVKE--KRPIVVFLENVKTFATHD-GGKTLNVVINTMNELG 123
Query: 150 YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITK 209
Y Q +L+P+ +GVP R R + L R +N ++ P P
Sbjct: 124 YSFQYSVLNPVDYGVPQKRERIYMLCFRND-------INREVFTFPRPF----------- 165
Query: 210 HDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRC 269
+K +E +F S +VN + VD E + ++
Sbjct: 166 ------KLNKFVE---------DFLISDYEVN---------SLIVD-----REDLRLNEK 196
Query: 270 VSIDH---FLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKG 326
+ I++ + + + + G I P + T S Y G + A K G
Sbjct: 197 IDINYNSISTIRVGTVGKGGQGERIYSP---KGIAITLSAY------GGVFA----KTGG 243
Query: 327 KASSLKEQHLRYFTPREVANLHSFPGDFQF-PHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
+ K + L PRE A + FP F+ P++ Q Y LGNS VV +LQ++
Sbjct: 244 YLINGKTRRLH---PRECARIMGFPDSFKLNPNN---NQAYKQLGNS----VVIDVLQFI 293
Query: 386 FAQAG 390
Q G
Sbjct: 294 TKQIG 298
>gi|254409526|ref|ZP_05023307.1| DNA-cytosine methyltransferase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
gi|196183523|gb|EDX78506.1| DNA-cytosine methyltransferase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
Length = 437
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
R ++ ++GIGG+R + +A + + V A +I+ VY+ NF H G+I+
Sbjct: 5 RFIDLFAGIGGIRLAFEQAANTLNYKTECVLASEISPDCQWVYKNNFNHEVL-GDIR--- 60
Query: 70 AAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
+++ H LL+ PCQ ++ G + D R F +IL LI T KP ++F EN
Sbjct: 61 --KINQLPPHDVLLAGFPCQSFSYAGKKAGFGDTRGTLFFEILRLI-DTCKPKALIF-EN 116
Query: 129 VVGFETSDTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
V G + D + I L + Y F+L+ FG+P +R R + +
Sbjct: 117 VRGIYSHDRGRTLETIKHELKSRGYSFDTFLLNSAHFGLPQNRVRLYMVG 166
>gi|398345731|ref|ZP_10530434.1| DNA-methyltransferase (dcm) [Leptospira broomii str. 5399]
Length = 420
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 15/171 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++G+GG +L K + V A +I+++ ++Y NFG RP +G+I+ + L
Sbjct: 2 KFIDLFAGLGGFHIALTK--LGHDCVFACEIDEELRNIYSDNFGIRP-EGDIRKIN---L 55
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK--PPHMLFVENV- 129
H L + PCQP+++ G QK + + + E + +K P +F+ENV
Sbjct: 56 KSIPKHDILCAGFPCQPFSKAGFQKGFNCP---DYGDLFEYVYKIIKFHNPKFVFLENVP 112
Query: 130 --VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
V T +++ L N Y +LSP +G+P R R + + +K
Sbjct: 113 NIVKHNNGKTWKTIVDKLENIGYNINHNVLSPHFYGIPQIRERVYIICTKK 163
>gi|331091354|ref|ZP_08340194.1| hypothetical protein HMPREF9477_00837 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330404515|gb|EGG84059.1| hypothetical protein HMPREF9477_00837 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 391
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 164/415 (39%), Gaps = 75/415 (18%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++GIGG ++ ++ + V A +I+ A + Y+ N+G I E
Sbjct: 6 KFIDLFAGIGGFHQAM--HNLGGECVFASEIDKYAIETYKTNYG---VDAGINIRDVHEE 60
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
D+ PCQ +++ G QK D R F +I+ ++ + P + +ENV
Sbjct: 61 DIPEHDVLCAGFPCQAFSKAGYQKGFEDETRGTLFFEIVRILKYHRTP--YIILENVRNL 118
Query: 133 ETSDTHAKMIEILANSDY-----LTQE-FILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
TS H ++ ++ + +T+E I+SP Q GVP R R L L Q
Sbjct: 119 -TSHDHGNTWRVIKSALHELGYIITEEPIIISPHQLGVPQFRERVVILGIHSSLGI--QN 175
Query: 187 LNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 246
LN +L P DD+ +T +LE+ D E++ S+ + F
Sbjct: 176 LNIEL-----PDKSKDDINFLT---------SGILETTDVDEKYYISSHEEKVLICWDEF 221
Query: 247 LSTGTAAV-------DDFGAAEET------------VEVDRCVSIDHFLVPLSLIERWGS 287
+ V D+FG + ++ +R + ++ S E+W +
Sbjct: 222 IKGIKEKVIGFPIWFDEFGKTYDYTDLGYADWKVKFIQKNRQLYENNKEFIDSWREKWNN 281
Query: 288 AMDIVYPDSK---RC---CCFTKSYYRYVKGTG----------SLLATVQPKNKGKASSL 331
D + K +C C + +G +L+A VQ G
Sbjct: 282 LEDFTMTEKKFEWQCGKDCSSVWEALIQFRPSGVRVKRPSVFPALVAMVQIPVIGSVR-- 339
Query: 332 KEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
R TPRE A L SFP F + + RQ Y GN++++ V+ + + LF
Sbjct: 340 -----RRLTPREAARLQSFPD--TFICNPNDRQAYKQFGNAVNVRVIQYMGEQLF 387
>gi|313667095|gb|ADR72992.1| M2.BspMI [Bacillus sp. M(2010)]
Length = 353
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 29/189 (15%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLTAAELD 74
++ +SG GG+ +L +A Q + + +IN+ A + ++ NF P +QG+IQNLT ++
Sbjct: 5 VDLFSGAGGLLLALKEA--GYQTLLSCEINESACETHKYNFPEIPLFQGDIQNLTEDKII 62
Query: 75 MY--GAHAWLL--SPPCQPYT----RQGLQKQSSDAR-------AFSFLKILELIPHTVK 119
Y G L+ PPCQ Y+ R+ + Q D + + ++++++++
Sbjct: 63 EYTKGTDVDLVVGGPPCQGYSMFGKRRFINTQGYDPQEDPRNKLVYEYIRVVKIL----- 117
Query: 120 PPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFI----LSPLQFGVPYSRPRYFCLA 175
P F+ENV GF + D + ++ + L + I + FGVP R R F +
Sbjct: 118 RPKYFFMENVKGFLSLDNGQFLKTVIQEFEELGYDNIKCEVVCAADFGVPQQRYRMFMIG 177
Query: 176 KR--KPLSF 182
R KP++F
Sbjct: 178 NRVGKPVNF 186
>gi|209527672|ref|ZP_03276170.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|423066291|ref|ZP_17055081.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
gi|209491900|gb|EDZ92257.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|406712333|gb|EKD07522.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
Length = 429
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 14/169 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVE----AFDINDKANDVYELNFGHRPYQGNIQNLT 69
+ ++ ++GIGG+R +A S + + +I+ A VY+ NF P QG+IQ +
Sbjct: 5 KFIDLFAGIGGLRLGFEQALESLGCIPDCLLSSEIDGDARQVYQANFSETP-QGDIQTIP 63
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ + H L PCQ ++ G + D R F +IL L+ + P ENV
Sbjct: 64 S----LPPHHVLLAGFPCQSFSYAGKKAGFGDTRGTLFFEILRLM--DSQQPQAFIFENV 117
Query: 130 VGFETSDTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
G T D + I + Y F+L+ +GVP +R R + +
Sbjct: 118 RGLVTHDQGKTINTIRQKMQERGYSFDLFLLNSSNYGVPQNRVRAYMMG 166
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 336 LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
+R TPRE A L FP FQ H + + Y LGNS++I VV + Q L
Sbjct: 366 VRRITPREAARLQGFPDSFQL--HPNQNKAYRQLGNSVTIPVVKAIAQELL 414
>gi|312281368|ref|YP_004022731.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181897|gb|ADQ42066.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 319
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTA-- 70
RV+ +SG+GG+ + +A V+ A DI+ A Y NF +G+IQ++ +
Sbjct: 5 RVVSLFSGVGGICLAFKQA--GFDVIWANDIDKYACITYRSNFPTVELVEGDIQSIDSNN 62
Query: 71 -AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E D+ A PCQP++ G Q+ +D R F +I+ ++ K P ++F+ENV
Sbjct: 63 IPECDIITAGF-----PCQPFSIAGYQRGLNDPRGRLFYEIVRIVHD--KKPKIIFLENV 115
Query: 130 ---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V T ++ L N Y + +L+ L++G VP +R R + +
Sbjct: 116 KNLVSHNNGITFKNILNALENEGYYLKYAVLNSLEYGNVPQNRERVYIVG 165
>gi|402833758|ref|ZP_10882370.1| modification methylase HaeIII family protein [Selenomonas sp. CM52]
gi|402279922|gb|EJU28697.1| modification methylase HaeIII family protein [Selenomonas sp. CM52]
Length = 411
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 8/165 (4%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA-- 71
R+++ ++G GG+ A Q+V AF+ +KA + Y LNF H + ++ N+ A
Sbjct: 2 RIVDLFAGCGGLSKGFQNAGF--QIVAAFEFWNKAAECYALNFSHPVFTTDLSNIEEAVG 59
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
++ + + PPCQ ++ G + + S A + I V+P + + +ENV
Sbjct: 60 KIQDLQPNIIIGGPPCQDFSHAGKRVEGSRA---GLTEAYAEIVRAVRPKYFV-MENVDR 115
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
S + + Y +L + GVP R R+FC+ +
Sbjct: 116 ARNSCAFREAHAVFKQLGYGLTMMVLDASRCGVPQKRKRFFCIGE 160
>gi|423135700|ref|ZP_17123346.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CIP
101113]
gi|371640804|gb|EHO06400.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CIP
101113]
Length = 318
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+ V Y+GIGG+ A+ +D N A Y NF H+ + ++ N+
Sbjct: 5 FSVGSLYAGIGGICLGFKNANFELAWANEYDKN--ACITYRKNFKHQLIEEDVFNVDIDS 62
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
L A PCQP++ G +K D R F +IL+ + + P ++F+ENV
Sbjct: 63 LSKVDVLAGGF--PCQPFSIAGYRKGFDDHRGNHFFRILDFVD--IIRPKVVFLENVKNL 118
Query: 133 ETSDTHA--KMIE-ILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
+T D K+IE L +Y Q +L+ +G +P++R R F +A
Sbjct: 119 KTHDKGITFKVIENALRERNYSFQSAVLNTKDYGNIPHNRERIFIVA 165
>gi|408789603|ref|ZP_11201258.1| DNA-cytosine methyltransferase [Lactobacillus florum 2F]
gi|408521209|gb|EKK21195.1| DNA-cytosine methyltransferase [Lactobacillus florum 2F]
Length = 414
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 6 CKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY---Q 62
KND ++ F++G+GG+ A V A + + A +ELNF R +
Sbjct: 1 MKND-----IISFFAGVGGIDLGFEDAG-KYHTVYANEFDKNAQHTFELNFNKRGTYLDR 54
Query: 63 GNIQNLTAAEL--DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP 120
+I+ +T ++ A L PCQP++ G +K D R F + L +I
Sbjct: 55 RDIKEVTTDDIRKQTQNADVLLAGFPCQPFSVAGFRKGFDDNRGDLFFETLRIIKSL--Q 112
Query: 121 PHMLFVENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLAK 176
P ++F+ENV T D T + E + ++ Y + +L+ ++G VP +R R + +
Sbjct: 113 PRVVFLENVKNLVTHDHGNTFKVIREFMVHTGYYIKWKVLNSKEYGNVPQNRERIYVVGF 172
Query: 177 RKPLSF 182
+ ++F
Sbjct: 173 KDKVAF 178
>gi|167761084|ref|ZP_02433211.1| hypothetical protein CLOSCI_03482 [Clostridium scindens ATCC 35704]
gi|167661318|gb|EDS05448.1| modification methylase HpaII [Clostridium scindens ATCC 35704]
Length = 405
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 161/410 (39%), Gaps = 71/410 (17%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++ +SGIGG ++ + + + V A +I+ + Y+ N+G I E D+
Sbjct: 26 IDLFSGIGGFHQAM--SSLGGRCVFASEIDKYCIETYQENYG---MDSGIDIRNVDEKDI 80
Query: 76 YGAHAWLLSPPCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHML-FVENVVGFE 133
PCQ +++ G Q+ D R F +I+ ++ H P +L V N+V +
Sbjct: 81 PPHDVLCAGFPCQAFSKAGKQEGMEDETRGTLFFEIVRILKHHHTPYIVLENVRNLVSHD 140
Query: 134 TSDTHAKMIEILANSDYLTQE--FILSPLQFGVPYSRPRYFCLAKRKP--LSFRCQLLNN 189
+T + L Y E ILSP FGVP R R L K +P + ++ +
Sbjct: 141 HGNTWKVIRANLRKQGYRLMEKPLILSPHHFGVPQLRERVVILGKYEPNRVDEPLDIVFH 200
Query: 190 QLLRSPSPLLGN-------DDMTVITKHDQPD-DSWDKLLESCD------PV-ERFLEFS 234
L++ + + D I++H++ ++WD+ D P+ F +
Sbjct: 201 DLIKKEQNSIYDVVKDHPVDKKYAISEHEEKVLNAWDEFYHGIDMKVIGFPIWSEFFRYE 260
Query: 235 NSGDQ--------VNTETGFLSTGTAAVD----------DFGAAEETVEVDRCVSIDHFL 276
+ + VN + +D DF + +E +ID
Sbjct: 261 KAPAEFPAWKQEFVNKNIRLYQSNQKFIDQWLKKYNDLKDFTPTQRKMEWQAGTNIDS-- 318
Query: 277 VPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHL 336
V +I+ S + I P CF +L+A VQ G+ +
Sbjct: 319 VWEGVIQLRPSGVRIKVP-----TCFP-----------ALVAIVQIPIIGR-------YK 355
Query: 337 RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
R T E A L SFP +F + + +Q Y GNS+++ V+A + LF
Sbjct: 356 RRLTVEESAALQSFPA--KFISNANDQQAYKQYGNSVNVTVIAECAKRLF 403
>gi|385225390|ref|YP_005785315.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 83]
gi|332673536|gb|AEE70353.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 83]
Length = 434
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 14 RVLEFYSGIGGMRYSLMKADVS----AQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
R ++ ++G+GG+R +A S +Q + + +I A Y +F P QG+I +
Sbjct: 30 RFVDLFAGLGGLRLGFEQASSSIGLKSQCILSSEIKKSALQAYIDHFKETP-QGDITQIN 88
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
++ + L PCQP++ G ++ D R F +I+ + K P +ENV
Sbjct: 89 TNDIPNF--DVLLAGFPCQPFSNAGKRRGLDDTRGTLFFEIMRFL--LAKKPRGFLLENV 144
Query: 130 VGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
G T D T + M+ L Y +L+ FGV +R R + +
Sbjct: 145 PGLLTHDKGKTFSIMLSHLKECGYFVNYKLLNAKDFGVAQNRERLYIVG 193
>gi|414086205|ref|YP_006986395.1| putative DNA-methyltransferase, type II restriction-modification
system [Cronobacter phage vB_CsaM_GAP161]
gi|378566530|gb|AFC22226.1| putative DNA-methyltransferase, type II restriction-modification
system [Cronobacter phage vB_CsaM_GAP161]
Length = 303
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
++++ +G+GG+R KA + + +I+ A Y N+G QG +L A +
Sbjct: 2 KIIDLCAGVGGVRLGFDKAFGGVECLLTSEIDKFAQQTYIENWGDDNLQG---DLFAIDE 58
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
+ H LL+ PCQ +++ GL+ D R F +IL +I K P +LF ENV
Sbjct: 59 NKVPDHDILLAGFPCQAFSKAGLKLGFDDVRGTVFFEILRII--RAKKPRVLFFENVPEL 116
Query: 133 ETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 174
T D T + +L Y L+ FG+P R R F +
Sbjct: 117 LTHDKGKTFKTIYGLLEAEGYNVFYQRLNTKDFGLPQRRERVFIV 161
>gi|425790875|ref|YP_007018792.1| DNA-cytosine methyltransferase [Helicobacter pylori Aklavik86]
gi|425629190|gb|AFX89730.1| DNA-cytosine methyltransferase [Helicobacter pylori Aklavik86]
Length = 309
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + ++A ++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFLQAGF--EIGWANELDKDACNTYRANFKHKLLEQDIKDLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ G L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 EDVG----LISAGFPCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V +T ++E L Y IL+ ++ +P +R R + +
Sbjct: 114 LVSHNKGETLKFILETLKKLGYFIHYKILNTYEYSTIPQNRERIYIIG 161
>gi|409991833|ref|ZP_11275061.1| DNA (cytosine-5-)-methyltransferase [Arthrospira platensis str.
Paraca]
gi|409937298|gb|EKN78734.1| DNA (cytosine-5-)-methyltransferase [Arthrospira platensis str.
Paraca]
Length = 429
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVE----AFDINDKANDVYELNFGHRPYQGNIQ 66
+ + ++ ++GIGG+R +A S + + +I+ A VY+ NF P QG+I+
Sbjct: 2 KTVKFIDLFAGIGGLRLGFEQAVDSFGCIPDCLLSSEIDRDARQVYQANFSETP-QGDIK 60
Query: 67 NLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
+++ + H L PCQ ++ G + D R F +IL LI + P
Sbjct: 61 TISS----LPPHHILLAGFPCQSFSYAGKKAGFGDTRGTLFFEILRLI--DSQQPQAFIF 114
Query: 127 ENVVGFETSDTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
ENV G T D + I + Y F+L+ +GVP +R R + +
Sbjct: 115 ENVRGLVTHDQGKTINTIRQKMQERGYSFDLFLLNSSNYGVPQNRVRAYMMG 166
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 336 LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
+R TPRE A L FP FQ H + + Y LGNS++I VV + Q L
Sbjct: 366 VRRITPREAARLQGFPDSFQL--HPNQNKAYRQLGNSVTIPVVKAIAQELL 414
>gi|291569071|dbj|BAI91343.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39]
Length = 429
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVE----AFDINDKANDVYELNFGHRPYQGNIQ 66
+ + ++ ++GIGG+R +A S + + +I+ A VY+ NF P QG+I+
Sbjct: 2 KTVKFIDLFAGIGGLRLGFEQAVDSFGCIPDCLLSSEIDRDARQVYQANFSETP-QGDIK 60
Query: 67 NLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
+++ + H L PCQ ++ G + D R F +IL LI + P
Sbjct: 61 TISS----LPPHHILLAGFPCQSFSYAGKKAGFGDTRGTLFFEILRLI--DSQQPQAFIF 114
Query: 127 ENVVGFETSDTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
ENV G T D + I + Y F+L+ +GVP +R R + +
Sbjct: 115 ENVRGLVTHDQGKTINTIRQKMQERGYSFDLFLLNSSNYGVPQNRVRAYMMG 166
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 336 LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
+R TPRE A L FP FQ H + + Y LGNS++I VV + Q L
Sbjct: 366 VRRITPREAARLQGFPDSFQL--HPNQNKAYRQLGNSVTIPVVKAIAQELL 414
>gi|302347057|ref|YP_003815355.1| putative modification methylase HhaI [Prevotella melaninogenica
ATCC 25845]
gi|302150379|gb|ADK96640.1| putative modification methylase HhaI [Prevotella melaninogenica
ATCC 25845]
Length = 453
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++ ++G+GG +L K + + V + ++ + +Y++N+ +G+I + ++
Sbjct: 10 IDLFAGLGGFHLALSK--LGCKCVFSSELKEDLRKLYQINYPGVRIEGDITKIAPKDIP- 66
Query: 76 YGAHAWLLSP-PCQPYTRQGLQKQSSD--ARAFSFLKILELIPHTVKPPHMLF--VENVV 130
AH + + PCQP+++ G ++ +D R F I++++ + KP +++ V N+
Sbjct: 67 --AHDIICAGFPCQPFSQAGNRQGFNDEKGRGTLFDYIIDIVAYH-KPKYIILENVSNLK 123
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
G + +T + E L +Y + ILSP +FG+P R R + + RK L
Sbjct: 124 GHDNGNTWRIIQEKLDEQEYSVKAEILSPHEFGIPQHRKRIYIVCIRKDLGL 175
>gi|428215157|ref|YP_007088301.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
gi|428003538|gb|AFY84381.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
Length = 418
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKAD----VSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
R ++ ++GIGG+R KA + V + +I + VY+ NFG P QG+I+ L
Sbjct: 5 RFVDLFAGIGGIRLGFEKAAEKLALKTHCVLSCEIKADSGWVYQQNFGESP-QGDIRIL- 62
Query: 70 AAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
+ H LL+ PCQ ++ G + D R F +I+ L+ T + LF EN
Sbjct: 63 ----EKLPPHDVLLAGFPCQSFSAAGKKAGFGDTRGTLFFEIIRLM-DTSQSQAFLF-EN 116
Query: 129 VVGFETSD--THAKMIE-ILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
V G T+D KMI+ L Y F+L+ FG+P +R R + L
Sbjct: 117 VRGLLTNDGGNTIKMIQHQLEARGYSFDIFVLNSANFGLPQNRLRVYLLG 166
>gi|363890421|ref|ZP_09317758.1| hypothetical protein HMPREF9628_02047 [Eubacteriaceae bacterium
CM5]
gi|361965685|gb|EHL18660.1| hypothetical protein HMPREF9628_02047 [Eubacteriaceae bacterium
CM5]
Length = 407
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 14/180 (7%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69
+ ++ +E ++G GG+ + KA + FD A+D + N H R +I N++
Sbjct: 73 KTFKTIELFAGAGGLALGIEKAGFDTIGLIEFD--KSASDTLKCNRPHWRVINDDIANIS 130
Query: 70 AAELDMY----GAHAWLLS--PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHM 123
+L+ Y LLS PCQ ++ G + DAR F + + P M
Sbjct: 131 CLDLEKYFDIKKGELDLLSGGAPCQSFSYAGKRLGLEDARGTLFYHYAKFLDKL--QPKM 188
Query: 124 LFVENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
ENV G T D T+ + +I NS Y Q+ IL+ +GV R R + R L
Sbjct: 189 FLFENVKGLLTHDRGRTYKTITDIFENSGYTIQKSILNAWDYGVAQKRERLITIGIRNDL 248
>gi|385226718|ref|YP_005786642.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SNT49]
gi|344331631|gb|AEN16661.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SNT49]
Length = 351
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 147/384 (38%), Gaps = 51/384 (13%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y A +++ A DI++ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SAHPHFELIWANDIDEDAILSYQAN--HKEAQTILCDIMQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CYNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VVG + ++ Y+ + IL+ L +GVP R R + K SF+
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK--SFK-- 169
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
Q R P P I H D+ L P++ +GD + G
Sbjct: 170 ----QKFRFPKP---------IKTHFSLKDALGDL----PPIQS----GENGDAL----G 204
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
+L +F + + + L+ + + G + D + + +T +
Sbjct: 205 YLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPESLRPKSGYTNT 264
Query: 306 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
Y + + T + + + R + RE A L SFP D++F S ++
Sbjct: 265 YAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDDYKFCGSSSAKR- 323
Query: 366 YALLGNSLSIAVVAPLLQYLFAQA 389
+GN+ V PLL A A
Sbjct: 324 -LQIGNA-----VPPLLSMALAHA 341
>gi|336420488|ref|ZP_08600652.1| hypothetical protein HMPREF0993_00029 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336009847|gb|EGN39836.1| hypothetical protein HMPREF0993_00029 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 387
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 161/410 (39%), Gaps = 71/410 (17%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++ +SGIGG ++ + + + V A +I+ + Y+ N+G I E D+
Sbjct: 8 IDLFSGIGGFHQAM--SSLGGRCVFASEIDKYCIETYQENYG---MDSGIDIRNVDEKDI 62
Query: 76 YGAHAWLLSPPCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHML-FVENVVGFE 133
PCQ +++ G Q+ D R F +I+ ++ H P +L V N+V +
Sbjct: 63 PPHDVLCAGFPCQAFSKAGKQEGMEDETRGTLFFEIVRILKHHHTPYIVLENVRNLVSHD 122
Query: 134 TSDTHAKMIEILANSDYLTQE--FILSPLQFGVPYSRPRYFCLAKRKP--LSFRCQLLNN 189
+T + L Y E ILSP FGVP R R L K +P + ++ +
Sbjct: 123 HGNTWKVIRANLRKQGYRLMEKPLILSPHHFGVPQLRERVVILGKYEPNRVDEPLDIVFH 182
Query: 190 QLLRSPSPLLGN-------DDMTVITKHDQPD-DSWDKLLESCD------PV-ERFLEFS 234
L++ + + D I++H++ ++WD+ D P+ F +
Sbjct: 183 DLIKKEQNSIYDVVKDHPVDKKYAISEHEEKVLNAWDEFYHGIDMKVIGFPIWSEFFRYE 242
Query: 235 NSGDQ--------VNTETGFLSTGTAAVD----------DFGAAEETVEVDRCVSIDHFL 276
+ + VN + +D DF + +E +ID
Sbjct: 243 KAPAEFPAWKQEFVNKNIRLYQSNQKFIDQWLKKYNDLKDFTPTQRKMEWQAGTNIDS-- 300
Query: 277 VPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHL 336
V +I+ S + I P CF +L+A VQ G+ +
Sbjct: 301 VWEGVIQLRPSGVRIKVP-----TCFP-----------ALVAIVQIPIIGR-------YK 337
Query: 337 RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
R T E A L SFP +F + + +Q Y GNS+++ V+A + LF
Sbjct: 338 RRLTVEESAALQSFPA--KFISNANDQQAYKQYGNSVNVTVIAECAKRLF 385
>gi|326798326|ref|YP_004316145.1| DNA-cytosine methyltransferase [Sphingobacterium sp. 21]
gi|326549090|gb|ADZ77475.1| DNA-cytosine methyltransferase [Sphingobacterium sp. 21]
Length = 409
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 10/178 (5%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL 68
D + ++ ++GIGG R L ++ + V + N+ A YE NF P+ G+I
Sbjct: 81 DRPKFTFIDLFAGIGGFR--LACQNLGGKCVFTSEWNESAKRTYEANFAEVPF-GDITKE 137
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
+ PCQ ++ G + D R F + E+I P F+EN
Sbjct: 138 STKAFIPKQFDVLCAGFPCQAFSIAGKRGGFEDTRGTLFFDVAEIIKR--HQPKAFFLEN 195
Query: 129 VVGFETSD---THAKMIEILAN--SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
V G D T ++ +L N + ++ I++ FGVP +R R F + RK L
Sbjct: 196 VKGLRNHDKGRTLTTILNVLRNDLNYFVPDPEIVNAKNFGVPQNRERIFIVGYRKDLG 253
>gi|296126993|ref|YP_003634245.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563]
gi|296018809|gb|ADG72046.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563]
Length = 324
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 8/170 (4%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++ ++GIGG R +L + A+ V + + + A + Y NFG P ++T + +
Sbjct: 15 IDLFAGIGGFRIAL--ESLGAKCVYSNEWDKFAKESYYKNFGDIPDD----DITKIDEKL 68
Query: 76 YGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPH-TVKPPHMLFVENVVGFE 133
AH L + PCQ ++ G QK D R F I ++ H K M V+N+V +
Sbjct: 69 IPAHDILCAGFPCQAFSISGKQKGFEDKRGNLFFDIARILKHQKTKVVFMENVKNLVRHD 128
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
T +I+I+ Y +L+ +G+P R R + + RK L+ +
Sbjct: 129 NGRTLNTIIKIMNELGYDFYYKVLNASDYGIPQKRERIYIVCFRKDLNIK 178
>gi|429460710|gb|AFZ85150.1| type II restriction-modification system methylation subunit [Vibrio
cholerae]
Length = 420
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 91/220 (41%), Gaps = 42/220 (19%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+R ++ ++GIGG+R + FD A Y+ N G P+ G+I + A E
Sbjct: 96 FRFIDLFAGIGGVRLGFQQNGGVCVFSSEFD--KHAQQTYKNNHGEIPF-GDITKIPANE 152
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H LL+ PCQP++ GL+ D R F I ++ K P +ENV G
Sbjct: 153 IP---DHDVLLAGFPCQPFSHAGLKLGIEDTRGTLFHDIANIL--ETKKPKFALLENVKG 207
Query: 132 FETSD---THAKMIEILANSDY-------------------LTQEFILSPLQFGVPYSRP 169
+ D T +++ L Y L +E +L + FG+P +R
Sbjct: 208 LISHDKGYTLKVILKTLTKMGYSCNIPKSVIEHGSTKEIQALAKEMVLKSVDFGIPQNRQ 267
Query: 170 RYFCLAKR----------KPLSFRCQLLNNQLLRSPSPLL 199
R + + R KPL + + ++L +P P L
Sbjct: 268 RIYIVLWRDGEVKSFEYPKPLGIEVK-VGDKLEENPDPKL 306
>gi|220930232|ref|YP_002507141.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10]
gi|220000560|gb|ACL77161.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10]
Length = 416
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 7 KNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ 66
+N G ++ ++GIGG+R D + V + + + A YE N+G +P+ G+I
Sbjct: 95 QNSGIKLTFIDLFAGIGGIRLGF--EDKYTKCVFSSEWDKYAAQTYEANYGEKPH-GDIT 151
Query: 67 NLTAAELDMYGAHAWLLSPPCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPH 122
+ E D+ L PCQP++ R+G ++ F L+IL+ K P
Sbjct: 152 KIN--ENDIPDHDVLLAGFPCQPFSNIGKREGFAHETQGTLFFDVLRILK-----KKQPK 204
Query: 123 MLFVENVVGFETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLA 175
M +ENV G T+D IL N L ++ FG+P R R +
Sbjct: 205 MFLLENVKGLLTNDNGNTFRVILDNLKSLGYSVFYEVMDAQNFGLPQRRERIVIVG 260
>gi|425462326|ref|ZP_18841800.1| Modification methylase HindV [Microcystis aeruginosa PCC 9808]
gi|389824640|emb|CCI26264.1| Modification methylase HindV [Microcystis aeruginosa PCC 9808]
Length = 310
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 6/163 (3%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE-L 73
++ ++G GG+ KA + +V AFD A DVY NF H + ++ + E L
Sbjct: 3 TIDLFAGCGGLSLGFQKAGFT--IVAAFDNWIPAIDVYSNNFSHPIFNVDLSRESNQEIL 60
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
Y + SPPCQ ++ G ++ RA L E++ T P +ENV E
Sbjct: 61 AQYNPEIIVGSPPCQDFSSAG-KRDEGLGRANLTLTFAEIV--TRVSPQWFVMENVDRIE 117
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
S + +I + Y +++ GVP +R RYF + K
Sbjct: 118 KSKILIQAKQIFTSHGYGLTGKVINSCYCGVPQARKRYFLIGK 160
>gi|313201769|ref|YP_004040427.1| modification methylase [Methylovorus sp. MP688]
gi|312441085|gb|ADQ85191.1| putative modification methylase [Methylovorus sp. MP688]
Length = 378
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLTAAE 72
+ +E +SGIGG R + ++ + V A DI A DVY FG ++G+I++
Sbjct: 2 KAVELFSGIGGFRLACDNKNI--RTVFANDIKTLACDVYASQFGTSVLHRGDIKDF---- 55
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF--VENV 129
D H L + PCQP++ G ++ D R F I++ + KP + + V+ +
Sbjct: 56 FDKIPDHDLLTAGFPCQPFSSAGKKEGIRDPRGTLFQSIVKTLDKN-KPKYFILENVKRL 114
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
+ E + A +++ L+ Y + +++ + FG+P +R R F R
Sbjct: 115 LSMENGEHFATILQELSTLGYCVEWRLINAIHFGLPQNRQRLFITGIR 162
>gi|220903552|ref|YP_002478864.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867851|gb|ACL48186.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 310
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 81/173 (46%), Gaps = 9/173 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
R++ +SG GG+ L++A ++V A D + Y+ N G+ G+I+ + A+++
Sbjct: 2 RIVSLFSGAGGLDLGLIQA--GHEIVWANDFDKDCVATYKKNIGNHAVLGDIKKINASQI 59
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
+ PCQ +++ L + +D R +++ L ++ + P ENV G
Sbjct: 60 PR--GEVVVGGFPCQGFSQANLLRSGNDERNSLYIEFLRIV--SSLQPRYFLAENVRGIL 115
Query: 134 TSDTHAKMIEILA---NSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
+ + + + +IL N+ Y + + + FGVP SR R RK + R
Sbjct: 116 SLEGGSAIKKILGDFNNAGYRLKYKLFNVADFGVPQSRFRVIIAGTRKDIPKR 168
>gi|384897195|ref|YP_005772623.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Lithuania75]
gi|317012300|gb|ADU82908.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Lithuania75]
Length = 348
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 155/390 (39%), Gaps = 63/390 (16%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPYFELIWANDIDKDAILSYQAN--HKKTQTILCDIMQLD 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFEN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 184
VVG S ++ + + N+ Y+ + IL+ L +GVP R R + K SF+
Sbjct: 114 VVGL-MSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGTLK--SFK- 169
Query: 185 QLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTET 244
Q SP P I H D+ L P++ +GD +
Sbjct: 170 -----QKFHSPKP---------IKTHFSLKDALGDL----PPIQS----GENGDAL---- 203
Query: 245 GFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTK 304
G+L +F + + + L+ + + G + D + P+S R K
Sbjct: 204 GYLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDL-PESLR----PK 258
Query: 305 SYY--RYVKGTGSLLATVQPKNKGKASSLKEQH---LRYFTPREVANLHSFPGDFQFPHH 359
S Y Y K A +N SS + H R + RE A L SFP D++F
Sbjct: 259 SGYINTYAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDDYKFCGS 318
Query: 360 LSLRQRYALLGNSLSIAVVAPLLQYLFAQA 389
S ++ +GN+ V PLL AQA
Sbjct: 319 ASAKRLQ--IGNA-----VPPLLSVALAQA 341
>gi|383318860|ref|YP_005379701.1| DNA-methyltransferase (dcm) [Methanocella conradii HZ254]
gi|379320230|gb|AFC99182.1| DNA-methyltransferase (dcm) [Methanocella conradii HZ254]
Length = 420
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 88/173 (50%), Gaps = 15/173 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++G+GG +L ++ + V A +IN+ +Y NFG +P +G+I+++ ++
Sbjct: 2 KFIDLFAGLGGFHLAL--RELGHECVFASEINENLRKIYLANFGIKP-EGDIRDIAIEKI 58
Query: 74 ---DMYGAHAWLLSPPCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLF--VE 127
D+ A PCQP+++ G QK +D R F +IL++I + P +++F V
Sbjct: 59 PPHDIICAGF-----PCQPFSKAGSQKGLNDTERGTLFYEILKIIDYH-DPKYLIFENVP 112
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
N+ T + +L + Y +SP FG+P R R + + K+ L
Sbjct: 113 NIRRHNNGQTWRIIEGLLRDRGYDISCNDISPHHFGIPQIRLRTYIVGKKNSL 165
>gi|428308044|ref|YP_007144869.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
gi|428249579|gb|AFZ15359.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
Length = 395
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 154/393 (39%), Gaps = 70/393 (17%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++F+SG GG A + + A+D N+ A + N +N+ +L+
Sbjct: 6 IDFFSGAGGWSCGFKMAGLKH--IGAYDFNESACRTAKYNIS--------ENVKCVDLNT 55
Query: 76 YGAHAWL--------LSPPCQPYTRQGL--QKQSSDARAFSFLKILELIPHTVKPPHMLF 125
+ L SPPCQ ++ +G +K ++ + F +E++ P +
Sbjct: 56 FDVRTILDGNVDIVVGSPPCQGFSNEGYKNEKDPRNSLVWKFFDFIEILT-----PKVWI 110
Query: 126 VENVVGFETSDTHAKMIEILANSD----YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
ENV GF+TS ++ + Y FIL+ +GVP R R+F + +K
Sbjct: 111 FENVPGFKTSYKGIYFKQLQQRLELMPAYQWNYFILNSSDYGVPQKRSRFFAIGAKKFQP 170
Query: 182 FRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKL--LESCDPVERFLEFSNSGDQ 239
R + +++L +LG D + W+ + L E+ F
Sbjct: 171 QRPEATHSKL----GEVLGTDKAISL---------WESISDLPKIGIGEKKGIFEYDKPA 217
Query: 240 VNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIV---YPDS 296
+ G+ + + + + V + VP+ GS M++ Y ++
Sbjct: 218 ECEYQKWARLGSNIIKNHTSQNHSQRVLEKIK----SVPM------GSGMEVFVNKYQEN 267
Query: 297 KRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQF 356
K C Y R VK S A +G S E+H R+ +PRE A + SFP F F
Sbjct: 268 KVVYC--GGYRRAVKDEPSYTAYW---TRGMTSIHPEEH-RFLSPRECARIQSFPDSFIF 321
Query: 357 PHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQA 389
+ + Y + N+ V PL+ FA++
Sbjct: 322 --QGTTIENYTQICNA-----VPPLVARSFARS 347
>gi|386750888|ref|YP_006224108.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi417]
gi|384557146|gb|AFH97614.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi417]
Length = 348
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 146/384 (38%), Gaps = 51/384 (13%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIMQLN 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VVG + ++ DY+ + IL+ L +GVP R R + K SF+
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERDYILEHAILNALDYGVPQIRERVILVGALK--SFK-- 169
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
Q P P I H D+ L P++ +GD + G
Sbjct: 170 ----QKFHFPKP---------IKTHFSLKDALGDL----PPIQS----GENGDAL----G 204
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
+L +F + + + L+ + + G + D + + + +T +
Sbjct: 205 YLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKNLRPKSGYTNT 264
Query: 306 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
Y + + T + + + R + RE A L SFP +++F S ++
Sbjct: 265 YAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSVREGARLQSFPDNYKFCGSTSAKRL 324
Query: 366 YALLGNSLSIAVVAPLLQYLFAQA 389
+GN+ V PLL A A
Sbjct: 325 Q--IGNA-----VPPLLSVALAHA 341
>gi|374587417|ref|ZP_09660509.1| DNA-cytosine methyltransferase [Leptonema illini DSM 21528]
gi|373876278|gb|EHQ08272.1| DNA-cytosine methyltransferase [Leptonema illini DSM 21528]
Length = 343
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 32/229 (13%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
R+++ ++GIGG R + V A+ V + +IN A Y+ NFG P G+I+N+ A ++
Sbjct: 11 RIIDLFAGIGGFRLAF--ESVGARCVFSSEINPSARRTYKENFGDEP-AGDIRNIHAMDI 67
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARA------------FSFLKILELIPHTVKPP 121
+ PCQP++ G+ K+ S R F L+ILE P
Sbjct: 68 PRF--DVLCAGFPCQPFSSAGVSKKQSMGRPHGFADKTSGTLFFEILRILEW-----HQP 120
Query: 122 HMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPL--QFGVPYSRPRYFCLAKRKP 179
+ENV + D I + + L + + + +F VP R R + R
Sbjct: 121 SAFLLENVKNLQAHDRGRTFTVIQKSLEALGYKLFVQLIDGRFWVPQKRQRIYIAGFRDR 180
Query: 180 LS-------FRCQLLNNQLLRSPSPLLGND-DMTVITKHDQPDDSWDKL 220
+ F + + SP P L + D+ V ++ D +W L
Sbjct: 181 AAWAAFVRRFEDAISGSLFDESPLPKLADILDVDVPERYTLGDKTWSYL 229
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 41/83 (49%), Gaps = 13/83 (15%)
Query: 310 VKGTGSL--LATVQPKNKGK--ASSLKEQ---HLRYFTPREVANLHSFPGDFQFPHHLSL 362
VKG L A P GK A L EQ + R TPRE A L +P DF FP +S
Sbjct: 245 VKGFADLDGCANTLPARYGKDGAEILIEQIGRNPRRLTPRECARLMGYPDDFVFP--VSD 302
Query: 363 RQRYALLGNSLSIAVVAPLLQYL 385
Q Y LGNS V+ P+++ L
Sbjct: 303 SQAYKQLGNS----VIPPVIRIL 321
>gi|448497515|ref|ZP_21610468.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
gi|445699746|gb|ELZ51766.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
Length = 399
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 144/380 (37%), Gaps = 77/380 (20%)
Query: 2 EKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY 61
E D +D +A V F+SG GG+ +A V D + A + Y NF
Sbjct: 18 ESDATSDDADAPVVAGFFSGCGGLDLGFERA--GFDVALGSDQWEPAAETYRRNFADTEV 75
Query: 62 -QGNIQNLTA---------AELDMYGAHAWLLSPPCQPYTRQG-----LQKQSSDARAFS 106
+G+++ L A A D G + PPCQ ++R L + D R
Sbjct: 76 LEGDVRELDAPAIRDAVAGAGYDPDGVDVVIGGPPCQGFSRLNNEQIELDEMEKDRRNTL 135
Query: 107 FLKILELIPHTVKPPHMLFVENV---VGFETSD---THAKMIEILANSDYLTQEFILSPL 160
F + L ++ +V P ++ +ENV + +TSD +++ A Y + +L
Sbjct: 136 FEEFLRVV--SVLEPRLVLMENVRDLINRQTSDDRYVKDLIVDEFAAHGYKCEYRVLEAE 193
Query: 161 QFGVPYSRPRYFCLAKRK--PLSFRCQLLNNQLLRSPSPLLGN--DDMTVITKHDQPDDS 216
Q+GVP R R F + + P+ F R+ L + DD+ +T D+
Sbjct: 194 QYGVPQKRRRIFFIGTDRDVPIRFPEPTTPEGSWRTAGEALADASDDLPNMTYA----DT 249
Query: 217 WDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFL 276
+K LE V + + D++ T + + D C D
Sbjct: 250 GEKTLERIRHVPPGGYYRDLPDRLKT-------------------KKYQCD-CEDTDTCP 289
Query: 277 VPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHL 336
+++R+G+ + + P+ T + + P+
Sbjct: 290 HEPEIVKRYGTYLRRLDPEEPSLTVSTNVF-------------IHPRED----------- 325
Query: 337 RYFTPREVANLHSFPGDFQF 356
RY TPRE+A L +FP +F F
Sbjct: 326 RYLTPREMARLQTFPDEFAF 345
>gi|66391578|ref|YP_239103.1| hypothetical protein RB43ORF127c [Enterobacteria phage RB43]
gi|62288666|gb|AAX78649.1| hypothetical protein RB43ORF127c [Enterobacteria phage RB43]
gi|406718867|emb|CCL97592.1| protein of unknown function [Enterobacteria phage RB43]
gi|415434135|emb|CCK73975.1| protein of unknown function [Enterobacteria phage RB43]
Length = 302
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
++++ +G+GG+R +A + V +I+ A Y N+G +G +L A +
Sbjct: 2 KLIDLCAGVGGVRMGFDRAFDGVECVLTAEIDKFAQQTYAANWGGDNLEG---DLFAIDE 58
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
+ H LL+ PCQ +++ GL+ D R F +IL +I K P +LF ENV
Sbjct: 59 NKVPDHDILLAGFPCQAFSKAGLKLGFDDVRGTVFFEILRII--RAKKPRVLFFENVPEL 116
Query: 133 ETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 174
T D T + +L Y L+ FG+P R R F +
Sbjct: 117 LTHDKGKTFKTIYGLLEAEGYNVFYQRLNTKDFGLPQRRERVFIV 161
>gi|420157319|ref|ZP_14664157.1| DNA (cytosine-5-)-methyltransferase [Clostridium sp. MSTE9]
gi|394756612|gb|EJF39692.1| DNA (cytosine-5-)-methyltransferase [Clostridium sp. MSTE9]
Length = 391
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 146/402 (36%), Gaps = 100/402 (24%)
Query: 2 EKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY 61
+K + KND + + ++ ++GIGGMR + A V + + N Y NFG +P
Sbjct: 43 QKQVIKNDIDGFTFIDLFAGIGGMRIAFESA--GGHCVYSNEWNKYCQQTYFANFGEQP- 99
Query: 62 QGNIQNLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARA------------FSFL 108
G+I + A ++ H L++ PCQP++ G+ K++S RA F
Sbjct: 100 DGDITKVNAEDIP---DHDILVAGFPCQPFSIAGISKKNSLGRATGFEDKTQGTLFFDVC 156
Query: 109 KILELIPHTVKPPHMLFVENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVP 165
+IL+ K P +ENV + D T + E L DY IL F VP
Sbjct: 157 RILK-----AKRPKAFMLENVKNLCSHDRGRTFEVIKESLKELDYEVFPQILDGQNF-VP 210
Query: 166 YSRPRYFCLA-KRKPLSFRCQLLNNQLLRSPSPLLGND-DMTVITKHDQPDDSWDKLLES 223
R R + R+ + P P++ + + V ++ D W L
Sbjct: 211 QHRERILIVGFDRRRYGNDIDFKFDITPVHPKPVMRDILEAEVEDRYTLSDKLWSYL--- 267
Query: 224 CDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIE 283
+ + AA + FG + L PL +
Sbjct: 268 --------------------QNYAAKHKAAGNGFG---------------YGLAPLDGVS 292
Query: 284 RWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPRE 343
R SA RY K +L KN K TPRE
Sbjct: 293 RTLSA-------------------RYYKDGSEVLIAQLGKNPRK-----------LTPRE 322
Query: 344 VANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
A L FP F+ P +S Q Y GNS+ + ++A + + +
Sbjct: 323 CARLQGFPDTFKIP--VSDTQAYKQFGNSVVVPLMANVAKLI 362
>gi|293395454|ref|ZP_06639738.1| modification methylase HgiDII [Serratia odorifera DSM 4582]
gi|291422138|gb|EFE95383.1| modification methylase HgiDII [Serratia odorifera DSM 4582]
Length = 354
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-GNIQNLT---- 69
++F+ G GG L +A VV D++ +A++ Y+ NF + +I+N+T
Sbjct: 3 AIDFFCGCGGASEGLRQAGFD--VVLGIDVDQQASETYKANFPDADFIFDDIRNVTVERV 60
Query: 70 AAELDMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
A + A LLS PCQP+++Q K D R + + + P +F+E
Sbjct: 61 ANSIAFKSADGLLLSACAPCQPFSQQNKYKNKDDERICLLDETHRFVSRLL--PEYIFLE 118
Query: 128 NVVGFETSDTH-----AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
NV G + D + I +L +Y F+ + ++GVP R R+ LA
Sbjct: 119 NVPGIQKIDGSKESPFTRFISLLDKLNYHYVYFVANAEKYGVPQRRKRFVLLA 171
>gi|256760956|ref|ZP_05501536.1| type II restriction-modification system methylation subunit
[Enterococcus faecalis T3]
gi|256682207|gb|EEU21902.1| type II restriction-modification system methylation subunit
[Enterococcus faecalis T3]
Length = 405
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 3 KDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDIN-DK-ANDVYELNFGHRP 60
K ND + +++ ++GIGG R ++ +V F DK A Y NFG P
Sbjct: 85 KPFLNNDKAPYTMIDLFAGIGGTRLGFQ---LTGKVKSVFSSEWDKFAQKTYFANFGEYP 141
Query: 61 YQGNIQNLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
+ ++T + + H L++ PCQ +++ G + D R F + +I K
Sbjct: 142 HG----DITQIDEKVVPNHDILVAGFPCQAFSQAGKKLGFEDIRGTLFFDVARII--KAK 195
Query: 120 PPHMLFVENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
P M +ENV +T D T+ + + L + DY + FG P +R R + +
Sbjct: 196 RPKMFLLENVKNLKTHDKGRTYETITKTLRDMDYEVDSILYKARDFGAPQNRERIYIVG 254
>gi|50914506|ref|YP_060478.1| Type II restriction-modification system methylation subunit
[Streptococcus pyogenes MGAS10394]
gi|40218542|gb|AAR83196.1| type II modification methylase [Streptococcus pyogenes]
gi|50261587|gb|AAT72355.1| methylase [Streptococcus pyogenes]
gi|50903580|gb|AAT87295.1| Type II restriction-modification system methylation subunit
[Streptococcus pyogenes MGAS10394]
gi|114386439|gb|ABI74454.1| DNA methyltransferase [Streptococcus pyogenes]
Length = 408
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 24/217 (11%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+++++ ++GIGG R + + V + + A Y NFG P +G+I T +
Sbjct: 101 FKMIDLFAGIGGTRLGFQLTN-EVETVFTSEWDKFAQKTYITNFGDTP-EGDI---TQID 155
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H L++ PCQ +++ G + D R F + +I K P +ENV
Sbjct: 156 ENTIPDHDILVAGFPCQAFSQAGKRLGFEDTRGTLFFDVARIIK--AKRPKAFLLENVKN 213
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 188
+T D T+ +I L N Y T + FGVP +R R + + F +N
Sbjct: 214 LKTHDKGKTYKIIISTLENLGYSTSTVLFKARDFGVPQNRERIYIVG------FDKTCVN 267
Query: 189 N-QLLRSPSPL-----LGNDDMT-VITKHDQPDDSWD 218
N R P P LGN T V K+ D W+
Sbjct: 268 NFSEFRFPEPFHLETKLGNILQTDVDEKYTISDKLWE 304
>gi|420437308|ref|ZP_14936292.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-28]
gi|393053622|gb|EJB54566.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-28]
Length = 348
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y A +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SAHPHFELIWANDIDKDAILSYQAN--HKEAQTILCDIMQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP +R R F + K
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQTRERVFLVGALK 166
>gi|209527695|ref|ZP_03276192.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|423064249|ref|ZP_17053039.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
gi|209491867|gb|EDZ92225.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|406713492|gb|EKD08660.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
Length = 314
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 12/167 (7%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE- 72
R ++ ++G GG+ SL + + AF+I A VY+ NF H +Q ++ +
Sbjct: 2 RTIDLFAGCGGL--SLGFENAGFDIKAAFEIWQPAIKVYQRNFRHPIFQVDLSEESVIHT 59
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENV 129
L Y + PPCQ ++ G ++ S RA +F +I+ I P +ENV
Sbjct: 60 LREYKPEVIIGGPPCQDFSSAG-KRDESLGRANLTINFARIIASIK-----PRFFMMENV 113
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
S T +IL NS Y +L GVP +R RYF + +
Sbjct: 114 SRITKSQTLKVTWQILKNSGYGLTGSVLDASYCGVPQARKRYFLIGE 160
>gi|383398018|gb|AFH22790.1| putative DNA methylase [Environmental Halophage eHP-35]
Length = 418
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
R ++ + GIGG R+ L +A + V+ + ++ A Y FG ++ L+ +E+
Sbjct: 6 RFIDLFGGIGGFRHGLEQASDRYECVDYIENDEYAVKSYNEIFGEEHKPRDVTQLSKSEI 65
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
H L + PCQ ++ G ++ + +AR F +I+ + K P ML +ENV G
Sbjct: 66 K---DHDLLCAGFPCQSFSVAGNRQGTDEARGKLFREIVRIA--KAKKPEMLLLENVKGI 120
Query: 133 ------------ETSDTHA--KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
E + HA ++++ L Y + +L+ +GVP +R R F +
Sbjct: 121 LSQKVVEDGGSVEGTKGHAFTEVLQALHELGYCLEWQVLNSKHWGVPQNRERVFIIG 177
>gi|416892728|ref|ZP_11924052.1| methylase [Aggregatibacter aphrophilus ATCC 33389]
gi|347814426|gb|EGY31075.1| methylase [Aggregatibacter aphrophilus ATCC 33389]
Length = 360
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNI-- 65
N E + ++ ++GIGG R ++ K + + V + + +++A YE NFG PY G+I
Sbjct: 29 NSQEKFTFIDLFAGIGGFRIAMQK--LGGKCVFSSEWDEQAQKTYEANFGDLPY-GDITL 85
Query: 66 ---QNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH 122
++ + D+ A PCQ ++ G + D R F + E+I P
Sbjct: 86 EETKSFIPEKFDILCAGF-----PCQAFSIAGKRGGFEDTRGTLFFDVAEIIRR--HQPK 138
Query: 123 MLFVENVVGFETSDTHAKMIEIL----ANSDYLTQE-FILSPLQFGVPYSRPRYFCLAKR 177
F+ENV G D + IL + Y E I++ FGVP +R R + +
Sbjct: 139 AFFLENVKGLTNHDKGRTLKTILNVLREDLGYFVPEPEIVNAKNFGVPQNRERIYIVGFH 198
Query: 178 K 178
K
Sbjct: 199 K 199
>gi|428777731|ref|YP_007169518.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
gi|428692010|gb|AFZ45304.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
Length = 468
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 20/182 (10%)
Query: 5 MCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
C+N + ++ ++GIGG R +L K + + + +I+ +A +VY+ NF +
Sbjct: 21 FCQNQ---FTFVDLFAGIGGFRIALEK--LGGKCLGYSEIDREAREVYQKNFINYVNANE 75
Query: 65 IQNLTAAELDMYGAHAWLL--SPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVK 119
I +++ H L+ PCQP++ G D R F ++I+EL
Sbjct: 76 IDLGDVKQINYLPWHIDLIVGGVPCQPWSIAGKSGGFDDPRGRLWFDVIRIVEL-----N 130
Query: 120 PPHMLFVENVVGFETSDTHAK----MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
P ENV G T H K ++E L NS Y Q +L+ FG+P R R F +
Sbjct: 131 QPQGFIFENVKGL-TDPRHQKSFSYILESLTNSGYQVQWKVLNSYDFGLPQDRQRVFIVG 189
Query: 176 KR 177
+
Sbjct: 190 NK 191
>gi|325989685|ref|YP_004249384.1| cytosine-specific methyltransferase [Mycoplasma suis KI3806]
gi|323574770|emb|CBZ40430.1| Cytosine-specific methyltransferase [Mycoplasma suis KI3806]
Length = 326
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSL-MKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ 66
N+ +++++ ++GIGG R + +V +VV + +I+ A Y+ NF P G+I+
Sbjct: 14 NENAKYKMIDLFAGIGGTRLGFHLTGEV--KVVFSSEIDKFAKQTYKSNFSDEPL-GDIR 70
Query: 67 NLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
+ + ++ H L++ PCQ +++ G +K D R F +I+ ++ K P
Sbjct: 71 EINSEDIP---NHDILVAGFPCQAFSQAGKKKGFEDERGTLFFEIIIILKD--KKPKTFL 125
Query: 126 VENVVGFETSDTHA--KMIEI-LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
+ENV T + K+IE L + +Y +L FG+P +R R + + K L
Sbjct: 126 LENVKNLRTHNKGETLKVIEQHLKDLNYHITYKVLKSRDFGIPQNRERIYIVGFNKDL 183
>gi|300869073|ref|ZP_07113674.1| Cytosine-specific methyltransferase (fragment) [Oscillatoria sp.
PCC 6506]
gi|300332930|emb|CBN58870.1| Cytosine-specific methyltransferase (fragment) [Oscillatoria sp.
PCC 6506]
Length = 345
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++GIGG R A + V + +++ +VY NF P+ G+I+++ E+
Sbjct: 2 KFIDLFAGIGGFRQGFENA--GFECVFSCEVDKHCREVYSNNFNEVPF-GDIKDVNPHEI 58
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---V 130
+ + + PCQP++ G + D R F I ++I VK P ++ +ENV +
Sbjct: 59 EDF--DVLVAGFPCQPFSICGKKLGFEDTRGTLFFDICQII--KVKQPKVVVLENVKHLI 114
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
+ +T ++ L + Y IL+ FG+P R R F + +
Sbjct: 115 HHDRGNTLKVILASLRDLGYNVDYKILNAKNFGLPQHRERIFIIGTK 161
>gi|335044409|ref|ZP_08537434.1| site-specific DNA methylase [Methylophaga aminisulfidivorans MP]
gi|333787655|gb|EGL53539.1| site-specific DNA methylase [Methylophaga aminisulfidivorans MP]
Length = 420
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 91/224 (40%), Gaps = 42/224 (18%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+R ++ ++GIGG+R + FD A Y+ N G P+ G+I + A E
Sbjct: 96 FRFIDLFAGIGGVRLGFQQNGGVCVFSSEFD--KHAQQTYKNNHGEIPF-GDITKIPANE 152
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H LL+ PCQP++ GL+ D R F I ++ K P +ENV G
Sbjct: 153 IP---DHDVLLAGFPCQPFSHAGLKLGIEDTRGTLFHDIANIL--ETKKPKFALLENVKG 207
Query: 132 FETSD---THAKMIEILANSDY-------------------LTQEFILSPLQFGVPYSRP 169
+ D T +++ L Y L +E +L + FG+P +R
Sbjct: 208 LISHDKGYTLKVILKTLTKMGYSCNIPKSVIEHGSTKEIQALAKEMVLKSVDFGIPQNRQ 267
Query: 170 RYFCLAKR----------KPLSFRCQLLNNQLLRSPSPLLGNDD 203
R + + R KPL + + + L +P P L D
Sbjct: 268 RIYIVLWRDGEVKSFEYPKPLGIEVK-VGDMLEENPDPKLTISD 310
>gi|256822924|ref|YP_003146887.1| DNA-cytosine methyltransferase [Kangiella koreensis DSM 16069]
gi|256796463|gb|ACV27119.1| DNA-cytosine methyltransferase [Kangiella koreensis DSM 16069]
Length = 419
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++ ++GIGG+R K V + + A + Y+ NFG P+ G+I + + +
Sbjct: 100 IDLFAGIGGIRLGFQK--YGGACVFSSEFEKAAQNTYKENFGEHPF-GDITTVPSENIP- 155
Query: 76 YGAHAWLLSP-PCQPYTRQGLQKQSSD--ARAFSFLKILELIPHTVKPPHMLF--VENVV 130
H LL PCQ ++ G ++ SD R F KI ++I T KP L V+N+
Sbjct: 156 --KHDILLGGFPCQAFSVAGYREGFSDKKGRGNLFFKIHDII-KTKKPEAFLLENVKNLQ 212
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
G + +T ++E L S Y +L+ + FG VP +R R + +
Sbjct: 213 GHDGGNTFKVIVEYLHESGYSVISNVLNSMDFGDVPQNRERIYIIG 258
>gi|306824635|ref|ZP_07457980.1| DNA methylase [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|304433203|gb|EFM36174.1| DNA methylase [Streptococcus sp. oral taxon 071 str. 73H25AP]
Length = 410
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 8/180 (4%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60
M + N E + + F+SG+GG+ + + +VV A + + A Y+LN
Sbjct: 1 MTNSVSSNRSEKYNIAAFFSGVGGIELGFEQTN-EFRVVYANEFDKYARQTYQLNHPDTY 59
Query: 61 YQG-NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
G +I ++ ++ + + PCQ ++ G +K D R F ++L +I +
Sbjct: 60 LDGRDIHDVQPEDIPVERVDIIMGGFPCQAFSIAGYRKGFDDDRGDLFFELLRMIEG--R 117
Query: 120 PPHMLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
P +F+ENV VG + +T + E L ++Y + +L+ +G +P +R R + +
Sbjct: 118 KPRAIFIENVKNMVGHDHGNTFKVIREALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|448494453|ref|ZP_21609440.1| DNA-cytosine methyltransferase [Halorubrum californiensis DSM
19288]
gi|445689288|gb|ELZ41528.1| DNA-cytosine methyltransferase [Halorubrum californiensis DSM
19288]
Length = 389
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 142/380 (37%), Gaps = 85/380 (22%)
Query: 6 CKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGN 64
++D +A V F+SG GG+ +A V D + A Y NF +G+
Sbjct: 12 ARDDADAPVVAGFFSGCGGLDLGFERA--GFDVALGSDQWEPAAKTYRRNFADTEVLEGD 69
Query: 65 IQNLTA---------AELDMYGAHAWLLSPPCQPYTRQG-----LQKQSSDARAFSFLKI 110
++ L A A D G + PPCQ ++R L + D R F +
Sbjct: 70 VRELDAPTIREAVAGAGYDPDGVDVVIGGPPCQGFSRLNNEQIELDEMEKDRRNTLFEEF 129
Query: 111 LELIPHTVKPPHMLFVENV---VGFETSD---THAKMIEILANSDYLTQEFILSPLQFGV 164
L ++ +V P ++ +ENV + +TSD +++ A Y + +L Q+GV
Sbjct: 130 LRVV--SVLEPQLVLMENVRDLINRQTSDDRYVKDLIVDEFAAHGYKCEYRVLEAEQYGV 187
Query: 165 PYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESC 224
P R R F + + + +R P P P+ +W E+
Sbjct: 188 PQKRRRIFFMGTDRDVP----------IRFPEPTT-------------PEGNWRTAGEA- 223
Query: 225 DPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIER 284
+++GD + T + TG E+T+E R V + L
Sbjct: 224 --------LADAGDDLPNMT-YADTG----------EKTLERIRHVPPGGYYRDLP---- 260
Query: 285 WGSAMDIVYPDSKRCCCFTKSYYRY----VKGTGSLLATVQPKNKGKASS----LKEQHL 336
D + +C C K + VK G+ L + P S +
Sbjct: 261 -----DRLKTKKYQCDCEDKDACPHEPEIVKRYGTYLRRLDPDEPSLTVSTNVFIHPSED 315
Query: 337 RYFTPREVANLHSFPGDFQF 356
RY TPRE+A L +FP +F F
Sbjct: 316 RYLTPREMARLQTFPDEFAF 335
>gi|386747437|ref|YP_006220645.1| DNA-cytosine methyltransferase [Helicobacter cetorum MIT 99-5656]
gi|384553679|gb|AFI05435.1| DNA-cytosine methyltransferase [Helicobacter cetorum MIT 99-5656]
Length = 309
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 83/168 (49%), Gaps = 14/168 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V ++GIGG + + V +++ A +++ A + Y NF H+ + +I++L EL
Sbjct: 2 KVGSLFAGIGGFECAFKQ--VGFEILWANELDKDACNTYRTNFKHKLLEQDIKSLNPNEL 59
Query: 74 DMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ + L+S PCQ ++ GLQK +D R +++ +I K P +L +ENV
Sbjct: 60 E----NVELISAGFPCQAFSIAGLQKGLNDERGAIVMELFRII--QAKKPQVLLLENVKN 113
Query: 132 F---ETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
+T ++E L N Y IL+ ++ +P +R R + +
Sbjct: 114 LARHNKGETLNLILETLKNLGYFVYYKILNTYEYSTIPQNRERIYIVG 161
>gi|429192518|ref|YP_007178196.1| DNA-methyltransferase Dcm [Natronobacterium gregoryi SP2]
gi|448326430|ref|ZP_21515789.1| hypothetical protein C490_13541 [Natronobacterium gregoryi SP2]
gi|429136736|gb|AFZ73747.1| DNA-methyltransferase Dcm [Natronobacterium gregoryi SP2]
gi|445612067|gb|ELY65806.1| hypothetical protein C490_13541 [Natronobacterium gregoryi SP2]
Length = 321
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 85/175 (48%), Gaps = 10/175 (5%)
Query: 13 WRVLEFYSGIGGMRYSLMKAD-VSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
++ + ++GIGG R + + D + V + +I+++A + YE N+G + +I+++ A
Sbjct: 4 YKFADLFAGIGGTRAAFSQVDGYEGECVFSCEISEEAQNAYERNWGESITEHDIRDVDAG 63
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ H LL+ PC ++R G + D R F +I++++ K P +ENV
Sbjct: 64 AV---PDHDVLLACWPCPSFSRMGKKDGFEDERGMLFFEIVDILKK--KQPKAFLLENVK 118
Query: 131 GFETSDTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
+ + + + L + Y + +L+ L FG+P R R + R+ ++
Sbjct: 119 NLRSVNDGSAFQTVKSHLTAAGYHVYDEVLNALDFGLPQHRERLILVGFREDIAL 173
>gi|434384967|ref|YP_007095578.1| DNA-methyltransferase Dcm [Chamaesiphon minutus PCC 6605]
gi|428015957|gb|AFY92051.1| DNA-methyltransferase Dcm [Chamaesiphon minutus PCC 6605]
Length = 318
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 10/172 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
++++ ++GIGG+R +D + A +YE N+G +P+ G+I + A
Sbjct: 4 KIIDLFAGIGGIRLGFEAHGCECIFSSEWDAD--AQKMYEANYGEQPH-GDITKI--APD 58
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
D+ L PCQP++ G +D R F I E++ K P+ +ENV
Sbjct: 59 DIPNHDILLAGFPCQPFSIIGKSLGFADTRGTLFFNIEEILRR--KQPYAFMLENVKQLR 116
Query: 134 TSDTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
+ D ++ I L Y +L+ L FG+P R R + ++ L F
Sbjct: 117 SHDRGRTLLVIKQKLEALGYFIYITVLNALDFGLPQKRERIIIVGFKEDLEF 168
>gi|313669224|ref|YP_004049508.1| DNA modification methylase [Neisseria lactamica 020-06]
gi|313006686|emb|CBN88152.1| putative DNA modification methylase [Neisseria lactamica 020-06]
Length = 330
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 17/197 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA-- 71
+ ++ ++G GG+ +A +V AF+ DKA D+Y NF H Y+ ++ + A
Sbjct: 2 KCIDLFAGCGGLSLGFEQAGF--EVCAAFEKWDKAIDIYRKNFNHPVYETDLTDEQTAIS 59
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVEN 128
++ Y + PPCQ ++ G ++ + RA + F I+ P +EN
Sbjct: 60 QISNYQPDLIMGGPPCQDFSSAG-KRDVTLGRADLTYHFANIV-----CSAHPTWFVMEN 113
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK-RKPLSFRCQLL 187
V + S +I+ +DY IL GVP +R R+F + K + +F +L
Sbjct: 114 VEQIKKSHILHDVIKQFMQADYGLTSVILDASYCGVPQARTRFFLIGKLGEEHNFLTPIL 173
Query: 188 NNQLLRSPSPL---LGN 201
++L P + LGN
Sbjct: 174 TDRLAEKPMTVRDYLGN 190
>gi|144900416|emb|CAM77280.1| modification methylase MthTI [Magnetospirillum gryphiswaldense
MSR-1]
Length = 356
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
E + F++ GG + + A + V F +++ LN G + + +++T
Sbjct: 18 ENFTFASFFACAGGADFGMKAAGANPVYVNEF--RRSVAELHRLNHG---FPVDTRSITE 72
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ YG+ +L PCQP+++ G Q DAR + E I KPP + ENV
Sbjct: 73 TGVTDYGSPTIMLGGFPCQPFSKAGNQLGGQDARGQMGVVFAEKI-MAAKPPAFI-CENV 130
Query: 130 VGF----ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
F E +D + M+ + ++ Y+ +L+ +GVP SR R F + R+ L R
Sbjct: 131 APFLTKPEFADVYGAMLAVWGDA-YVVTPTLLNACHYGVPQSRERAFIIGYRRDLGIR 187
>gi|417003688|ref|ZP_11942677.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus prevotii
ACS-065-V-Col13]
gi|325478388|gb|EGC81503.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 321
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA-----NDVYELNFGHRPYQGNIQNL 68
++LE + GIG +R + + + +VV+ +I DKA N++Y ++ + G
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEI-DKACVKSYNELYGEDYKAKSVVGYKAPN 63
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLF 125
+L M+G+ PCQ ++R G ++ ++S R+ + + +I + P +
Sbjct: 64 EKIDLIMHGS-------PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKEKPKWII 116
Query: 126 VENVVGFETSD------THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKP 179
ENV G + + K +EIL Y ++ IL+ + FG+P R R F ++
Sbjct: 117 WENVKGVLDRNMRDSFFIYLKELEILG---YESKYEILNAMDFGIPQKRERIFVVSCLGA 173
Query: 180 LSFRCQLLNNQLLRSPSPLLGND 202
+F L + R S L ND
Sbjct: 174 NNFSFNKLERKETRPLSEFLEND 196
>gi|419799142|ref|ZP_14324510.1| putative DNA (cytosine-5-)-methyltransferase [Streptococcus
parasanguinis F0449]
gi|385698682|gb|EIG29029.1| putative DNA (cytosine-5-)-methyltransferase [Streptococcus
parasanguinis F0449]
Length = 406
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60
M + N E + + F+SG+GG+ + + +VV A + + A Y LN+ +
Sbjct: 1 MTNSVSSNQSEKYNIAAFFSGVGGIELGFEQTN-EFRVVYANEFDKYARQTYRLNYPNTH 59
Query: 61 YQG-NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
+I + E+ + PCQ ++ G +K D R F ++L +I +
Sbjct: 60 LDSRDIHAVQPEEIPAERVDVIMGGFPCQAFSIAGYRKGFDDDRGDLFFELLRMIEG--R 117
Query: 120 PPHMLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
P +F+ENV VG + +T + E L ++Y + +L+ +G +P +R R + +
Sbjct: 118 KPRAIFIENVKNMVGHDHGNTFKVIREALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|261401478|ref|ZP_05987603.1| modification methylase HindV [Neisseria lactamica ATCC 23970]
gi|269208450|gb|EEZ74905.1| modification methylase HindV [Neisseria lactamica ATCC 23970]
Length = 330
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 17/197 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA-- 71
+ ++ ++G GG+ +A +V AF+ DKA D+Y NF H Y+ ++ + A
Sbjct: 2 KCIDLFAGCGGLSLGFEQAGF--EVCAAFEKWDKAIDIYRKNFNHPVYETDLTDEQTAIS 59
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVEN 128
++ Y + PPCQ ++ G ++ + RA + F I+ P +EN
Sbjct: 60 QISNYQPDLIMGGPPCQDFSSAG-KRDVTLGRADLTYHFANIV-----CSAHPTWFVMEN 113
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK-RKPLSFRCQLL 187
V + S +I+ +DY IL GVP +R R+F + K + +F +L
Sbjct: 114 VEQIKKSHILHDVIKQFMQADYGLTSVILDASYCGVPQARTRFFLIGKLGEEHNFLTPIL 173
Query: 188 NNQLLRSPSPL---LGN 201
++L P + LGN
Sbjct: 174 TDRLAEKPMTVRDYLGN 190
>gi|113478034|ref|YP_724095.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
gi|110169082|gb|ABG53622.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
Length = 413
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 17/170 (10%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ----GNIQNLT 69
+ +E ++GIGG + A++ + + A D++ VY+ NFG I L
Sbjct: 30 KAIELFAGIGGFCLGMRAANI--KTIWANDVSKLCCQVYQSNFGSSSIVLDDINKINLLE 87
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVEN 128
E D+ A PCQP+++ G + D R F +I+E+I K P +EN
Sbjct: 88 IPEHDILTA-----GFPCQPFSQAGKKMGIRDRLRGTLFERIIEII--QAKKPKYFLLEN 140
Query: 129 VVGFETSDT--HAKMI-EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
V T + H ++I LA+ DY + I++P+ F +P +R R F
Sbjct: 141 VKRILTMEKGYHFRIILNALASLDYFIEWRIINPINFSIPQNRDRIFIFG 190
>gi|420422764|ref|ZP_14921841.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4110]
gi|393036698|gb|EJB37737.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4110]
Length = 318
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++F SGIGG R L + + + V +IND+A YEL F G++ + +L
Sbjct: 7 IDFCSGIGGGRLGLERCHL--KCVGHAEINDEALRTYELFFKDTHNFGDLMRINPNDLPN 64
Query: 76 YGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGF 132
+ A + PCQ ++ G +K D R + ++IL+ VK P +ENV G
Sbjct: 65 FD--ALISGFPCQAFSINGKRKGLEDERGTIIYGLIRILK-----VKQPKCFLLENVKGL 117
Query: 133 ---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ +T +I+ L + Y T IL+ F + +R R + + RK L
Sbjct: 118 IHHKQQETFKIIIKALQEAGYTTHYQILNSADFQLAQNRERLYIVGFRKDLK 169
>gi|357541808|gb|AET84570.1| DNA methylase [Ostreococcus lucimarinus virus OlV4]
Length = 418
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 16 LEFYSGIGGMRYSLM-----KADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
++ SGIGG R ++ ++++ V + DI A D Y LNF + +I +L
Sbjct: 6 IDLCSGIGGFRVAIEDFQNESSNINFNCVLSADIKQDAIDTYNLNFNEHNEKCDIYSLEV 65
Query: 71 AELDMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
++ + LL PCQP++ G +K SD R KI+EL + P + +EN
Sbjct: 66 EKVKPFD----LLCAGFPCQPFSTAGQRKGFSDDRGGMIFKIMELCKY--HKPKYILLEN 119
Query: 129 VVGFETSDTHA---KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
V T D +I++ +Y L+ FG P SR R + +
Sbjct: 120 VYNLLTIDGGKCIQTIIQLFEELNYNVYYEKLNSKDFGCPQSRERVYIIC 169
>gi|331091845|ref|ZP_08340677.1| hypothetical protein HMPREF9477_01320 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402744|gb|EGG82311.1| hypothetical protein HMPREF9477_01320 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 410
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL 68
D +A+ +E ++G GG+ + KA + FD D A + R +I N+
Sbjct: 73 DSDAFTTIELFAGAGGLALGIEKAGFEPVGLIEFD-KDAAESLKTNRPNWRVIHDDIANI 131
Query: 69 TAAEL-DMYGAHAWLL-----SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH 122
+ +L D +G L PCQ ++ G + DAR F + P
Sbjct: 132 SCLDLEDYFGIKKGELDLLSGGAPCQAFSYAGKRLGLEDARGTLFYHYATFLQKL--QPK 189
Query: 123 MLFVENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKP 179
M ENV G T D T+A + I + Y Q+ +L+ FGVP R R + R
Sbjct: 190 MFLFENVRGLLTHDKGRTYATITNIFEQAGYTIQKKVLNAWDFGVPQKRERLITVGIRND 249
Query: 180 L 180
L
Sbjct: 250 L 250
>gi|239627884|ref|ZP_04670915.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239518030|gb|EEQ57896.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 325
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+ ++ + GIGG R +L V V + D N A Y+ N+G P G+I + A +
Sbjct: 4 FTFIDLFCGIGGFRQAL--ESVGGTCVFSCDKNKNARLTYQSNYGDMP-DGDITKIEAKD 60
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
+ + + PCQP++ G Q+ +D R F +I +I T P ++F+ENV
Sbjct: 61 IPPF--NILCAGFPCQPFSIAGKQRGFADERGTMFFEIARII--TYHKPEIVFLENVANL 116
Query: 133 ETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
D T + L Y + +L +G R R + + RK L
Sbjct: 117 TRHDGGNTLKVITGTLKKLGYHVKCEVLKASDYGCATIRKRIYFVCFRKDLK 168
>gi|305665822|ref|YP_003862109.1| DNA (cytosine-5-)-methyltransferase [Maribacter sp. HTCC2170]
gi|88710593|gb|EAR02825.1| DNA (cytosine-5-)-methyltransferase [Maribacter sp. HTCC2170]
Length = 408
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 164/414 (39%), Gaps = 56/414 (13%)
Query: 14 RVLEFYSGIGGMRYSLMKAD----VSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNL 68
+V+E ++G+GG R L V + E A+ VYE FG + +I +
Sbjct: 5 KVIELFAGVGGFRLGLENTGNYEVVWSNQWEPATKAQHASMVYEARFGSENHSNQDISEV 64
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSD---ARAFSFLKILELIPHTVKPPHMLF 125
E+ A + PCQ Y+ + S + + I +++ PP LF
Sbjct: 65 PTGEIP--DADILVGGFPCQDYSVATTLQNSRGLIGKKGVLWWSIHKILSEKKNPPKYLF 122
Query: 126 VENVVGFETSDT------HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKP 179
+ENV S + A M++ L Y + +++ +G+P R R F +A K
Sbjct: 123 LENVDRLLKSPSTQRGRDFAIMLKSLGELGYAVEWRVINAADYGMPQRRRRIFFIAYHKS 182
Query: 180 LSFRCQLLNNQLLRSPSPLLGNDDMTV---------ITKHDQ--PDDSWDKLLESCDPVE 228
+ + +L ++ S ND T+ + H + + + ++ E+ + E
Sbjct: 183 TA-----IYKKLKKADSSQWLNDIGTISEAFPVHHILENHKRFSIEGNLVEISETFNQGE 237
Query: 229 RFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSID-HFLVPLSLIERWGS 287
+ F+NSG V+ G T A + G +V + + F +P + +W
Sbjct: 238 KLSPFANSGVFVD---GRAHTAKAFANYEGGKTVLNDVLQNGEVTPEFFIPAEDVPKWE- 293
Query: 288 AMDIVYPDSKRCCCFTKSYYRYVKGTGSLL---------ATVQPKNKGKASSL------K 332
SK+ K+ ++Y G+++ T+ GK+ S
Sbjct: 294 ----YLKGSKKEVRTAKTGFQYNYSEGAMVFPDALDNASRTIITGEGGKSPSRFKHVVQS 349
Query: 333 EQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 386
+ LR TP E+ L+ FP D ++ +R +GN+L + VV + + LF
Sbjct: 350 SKGLRRLTPVELERLNMFPDDHTKLEGVTDAKRAFFMGNALVVGVVEKIGKKLF 403
>gi|435849917|ref|YP_007301858.1| DNA-methyltransferase Dcm [Methanomethylovorans hollandica DSM
15978]
gi|433663405|gb|AGB50830.1| DNA-methyltransferase Dcm [Methanomethylovorans hollandica DSM
15978]
Length = 355
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ 66
++ +V +SGIGG + A D+S +++ A +I A +Y+ +FG G+I
Sbjct: 2 QSLKVASLFSGIGGFEKGIFDAANEFDISIELIFASEIEKNACKIYKNHFGSAHLHGDIT 61
Query: 67 NLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
++++ + H L + PC +++ G +K D R F ++ ++ KP + L
Sbjct: 62 TISSSRIP---DHNILCAGFPCPSFSQAGNRKGFDDCRGQLFFEVCRIL-RDKKPEYYLL 117
Query: 126 --VENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPR 170
V+N+V T ++ +I+ Y + +L+ FG+P +R R
Sbjct: 118 ENVKNLVNHNEGRTIERIAQIIGELGYSFEFQVLNTRDFGIPQNRER 164
>gi|372210504|ref|ZP_09498306.1| DNA-cytosine methyltransferase [Flavobacteriaceae bacterium S85]
Length = 421
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNI-----QN 67
++ ++ ++GIGG R +L ++ + V + + + Y+ NFG P+ G+I +N
Sbjct: 97 FKFIDLFAGIGGFRLALQ--NLKGKCVFTSEWDKYSKQTYKANFGEFPF-GDITKPETKN 153
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
D+ A PCQ ++ G + D R F + E+I K P +F+E
Sbjct: 154 YIPDNFDVLCAGF-----PCQAFSIAGRRGGFEDTRGTLFFDVAEIIKK--KQPKAIFLE 206
Query: 128 NVVGFETSD---THAKMIEILAN--SDYLTQEFILSPLQFGVPYSRPRYFCLA 175
NV G D T A ++ +L Y+ + I++ +FGVP +R R F +
Sbjct: 207 NVKGLRNHDKGKTLATILNVLREDLGYYVPEPQIINAKEFGVPQNRERIFIVG 259
>gi|297563163|ref|YP_003682137.1| DNA-cytosine methyltransferase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847611|gb|ADH69631.1| DNA-cytosine methyltransferase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 387
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 163/384 (42%), Gaps = 49/384 (12%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG----HRPYQGNIQNLTA 70
VLEF++GIG R L A + +V + D ++YE +FG H +I+ + A
Sbjct: 14 VLEFFAGIGLARIGLEAAGL--RVSWSNDYETSKKNMYEGHFGTSSDHTYVLRDIRKVYA 71
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIP--HTVKPPHMLFVEN 128
+L + AW S PC + G + + A + +F + + ++ + +PP + +EN
Sbjct: 72 DQLPAGASVAW-ASSPCTDLSLAGARAGLAGAESGTFWEFIRILKDFNESRPP-IAVLEN 129
Query: 129 VVGFETS---DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VVG TS + A ++ Y ++ +F +P SRPR F +A + P + R Q
Sbjct: 130 VVGLATSHAGEDLAAAVKAFNELGYSVDVLVIDARRF-IPQSRPRLFLVAAQNPPNGRPQ 188
Query: 186 LLNNQLLRSP--SPLLGNDDMTVITKH-DQPDDSWDKLLESCDPVERF-LEFSNSGDQVN 241
+ LR P+ G+ +T H +P C VE L D+
Sbjct: 189 --TDSTLRPDFLQPVFGDPTLTTHRAHLPEPPALLTSGFGMC--VEEMPLNDERWWDEER 244
Query: 242 TETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCC 301
TE F+S+ + + +++ + + R G + V PD C
Sbjct: 245 TE-AFMSSLSPT-----QYQRVMQMHSSPGVKYRTA--YRRTRKGIPVWEVRPDDVSGCL 296
Query: 302 FTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLS 361
R +G S A ++ N SSL H+R+ TPRE A L G+++
Sbjct: 297 ------RTARGGSSKQAVLRVDN----SSL---HVRWMTPREYARLMG-AGEYKLD---G 339
Query: 362 LRQRYALLGNSLSIAVVAPLLQYL 385
+R AL G AV AP++Q+L
Sbjct: 340 IRANKALFG--FGDAVAAPVVQWL 361
>gi|389581931|dbj|GAB64652.1| DNA (cytosine-5)-methyltransferase-like protein 2, partial
[Plasmodium cynomolgi strain B]
Length = 769
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 28/244 (11%)
Query: 101 DARAFSFLKILELIPHTVKP--PHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILS 158
D R+ SF+ I L+ + P +F+ENV FE S + I + +Y Q ++LS
Sbjct: 287 DERSRSFIHICNLLKKVKEENLPKYIFIENVRNFELSTSFFYFINSVK-ENYNFQTYLLS 345
Query: 159 PLQFGVPYSRPRYFCLAKRK------------PLSFRCQLLNNQLLRSPSPLLGNDDMTV 206
PLQ+G+P R R++C+ +RK P L +N L+ + + ++
Sbjct: 346 PLQYGIPNERLRFYCICRRKHNLVDLTSWECFPSGGTTPLYSNSLMPAKCIIPAFENNPN 405
Query: 207 ITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE----E 262
+ L D E++ + ++N G L A +
Sbjct: 406 FRPSPKYSFYTPSLATFLDHNEKYPITCYTKGEINLTNGTLEEHEVANSTLTTCSSFCFD 465
Query: 263 TVEVDR-----CVSIDHFLVPLSL----IERWGSAMDIVYPDSKRCCCFTKSYYRYVKGT 313
++++R C + V S + G D++ + CFT +Y RY+ G+
Sbjct: 466 MIDINRNGNVCCFDGGRYYVEKSEAIKDLPNQGYLKDLINSNKLHSMCFTSNYGRYINGS 525
Query: 314 GSLL 317
GS+L
Sbjct: 526 GSVL 529
>gi|260890952|ref|ZP_05902215.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254]
gi|260859505|gb|EEX74005.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254]
Length = 452
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 9/169 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V+ +SG GGM ++KA +V+ A D A + Y N G+ G+I +++ E+
Sbjct: 10 KVISLFSGAGGMDLGIIKA--GFEVIWANDFEKDAVETYRRNIGNHIVLGDITMISSKEI 67
Query: 74 DMYGAHAWLL--SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ L+ PCQ ++ + D R F + ++L +I K P ENV G
Sbjct: 68 PLKKGEVDLIIGGFPCQGFSIANKNRSMEDKRNFLYKEMLRIIKD--KKPKFFIAENVKG 125
Query: 132 ---FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
+ +++ + Y +L+ +GVP R R + R
Sbjct: 126 ILSLHNGEVIKMILKDFEDLGYKVDVKLLNAADYGVPQQRERVIIMGNR 174
>gi|419835140|ref|ZP_14358588.1| DNA (cytosine-5-)-methyltransferase family protein [Vibrio cholerae
HC-46B1]
gi|421341858|ref|ZP_15792267.1| DNA-cytosine methyltransferase family protein [Vibrio cholerae
HC-43B1]
gi|423733488|ref|ZP_17706718.1| DNA (cytosine-5-)-methyltransferase family protein [Vibrio cholerae
HC-41B1]
gi|424007784|ref|ZP_17750740.1| DNA (cytosine-5-)-methyltransferase family protein [Vibrio cholerae
HC-44C1]
gi|395947035|gb|EJH57693.1| DNA-cytosine methyltransferase family protein [Vibrio cholerae
HC-43B1]
gi|408632260|gb|EKL04725.1| DNA (cytosine-5-)-methyltransferase family protein [Vibrio cholerae
HC-41B1]
gi|408859281|gb|EKL98942.1| DNA (cytosine-5-)-methyltransferase family protein [Vibrio cholerae
HC-46B1]
gi|408867641|gb|EKM06997.1| DNA (cytosine-5-)-methyltransferase family protein [Vibrio cholerae
HC-44C1]
Length = 417
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 91/224 (40%), Gaps = 42/224 (18%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+R ++ ++GIGG+R + FD A Y+ N G P+ G+I + A E
Sbjct: 96 FRFIDLFAGIGGVRLGFQQNGGVCVFSSEFD--KHAQQTYKNNHGEIPF-GDITKIPANE 152
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H LL+ PCQP++ GL+ D R F I ++ K P +ENV G
Sbjct: 153 IP---DHDVLLAGFPCQPFSHAGLKLGIEDTRGTLFHDIANIL--ETKKPKFALLENVKG 207
Query: 132 FETSD---THAKMIEILANSDY-------------------LTQEFILSPLQFGVPYSRP 169
+ D T +++ L Y L +E +L + FG+P +R
Sbjct: 208 LISHDKGYTLKVILKTLTKMGYSCNIPKSVIEHGSTKEIQALAKEMVLKSVDFGIPQNRQ 267
Query: 170 RYFCLAKR----------KPLSFRCQLLNNQLLRSPSPLLGNDD 203
R + + R KPL + + + L +P P L D
Sbjct: 268 RIYIVLWRDGEVKSFEYPKPLGIEVK-VGDMLEENPDPKLTISD 310
>gi|152998369|ref|YP_001343204.1| DNA-cytosine methyltransferase [Marinomonas sp. MWYL1]
gi|150839293|gb|ABR73269.1| DNA-cytosine methyltransferase [Marinomonas sp. MWYL1]
Length = 417
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 31/186 (16%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
++R ++ ++GIGG+R +A + FD A Y+ N G P+ G+I ++
Sbjct: 95 SFRFIDLFAGIGGVRLGFQQAGGTCVFSSEFD--KHAQLTYKKNHGEFPF-GDITLISPE 151
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ AH LL+ PCQP++ GL+ D R F I +I K P +ENV
Sbjct: 152 SIP---AHDVLLAGFPCQPFSHAGLKLGIEDTRGTLFHDIARIIEE--KNPRFAVLENVK 206
Query: 131 GFETSD---THAKMIEILANSDY-------------------LTQEFILSPLQFGVPYSR 168
G + D T +++ L N Y L + +L + FGVP +R
Sbjct: 207 GLISHDKGHTLKVILKTLTNIGYSCNIPKSTIENGSTKEIQTLAKSMVLKSVDFGVPQNR 266
Query: 169 PRYFCL 174
R + +
Sbjct: 267 QRIYIV 272
>gi|317500279|ref|ZP_07958506.1| cytosine-specific methyltransferase [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087487|ref|ZP_08336423.1| hypothetical protein HMPREF1025_00006 [Lachnospiraceae bacterium
3_1_46FAA]
gi|316898322|gb|EFV20366.1| cytosine-specific methyltransferase [Lachnospiraceae bacterium
8_1_57FAA]
gi|330410467|gb|EGG89898.1| hypothetical protein HMPREF1025_00006 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 410
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL 68
D +A+ +E ++G GG+ + KA + FD D A + R +I N+
Sbjct: 73 DSDAFTTIELFAGAGGLALGIEKAGFEPLGLIEFD-KDAAESLKTNRPNWRVIHDDIANI 131
Query: 69 TAAEL-DMYGAHAWLL-----SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH 122
+ +L D +G L PCQ ++ G + DAR F + P
Sbjct: 132 SCLDLEDYFGIKKGELDLLSGGAPCQAFSYAGKRLGLEDARGTLFYHYATFLQKL--QPK 189
Query: 123 MLFVENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKP 179
M ENV G T D T+A + I + Y Q+ +L+ FGVP R R + R
Sbjct: 190 MFLFENVRGLLTHDKGRTYATITNIFEQAGYTIQKKVLNAWDFGVPQKRERLITVGIRND 249
Query: 180 L 180
L
Sbjct: 250 L 250
>gi|321310755|ref|YP_004193084.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis str.
Langford 1]
gi|319802599|emb|CBY93245.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis str.
Langford 1]
Length = 362
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQN 67
N+ +++++ ++GIGG R K VV + +I+ + Y+ NFG P G+I
Sbjct: 50 NEKATYKMIDLFAGIGGTRLGFYKTG-KVNVVFSSEIDKFSIKTYKANFGETP-SGDITK 107
Query: 68 LTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
+ + ++ H L+ PCQ +++ G + D R F +I ++ K P +
Sbjct: 108 IGSEDIP---DHDILVGGFPCQSFSQAGKKLGFKDTRGTLFFEIERVLRD--KRPKAFLL 162
Query: 127 ENVVGFET---SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
ENV ++ +T+ + L N +Y IL FGVP +R R + +
Sbjct: 163 ENVKNLKSHKGGETYEVIERALRNLNYEVYSTILRARDFGVPQNRERIYIVG 214
>gi|86136173|ref|ZP_01054752.1| hypothetical protein MED193_18659 [Roseobacter sp. MED193]
gi|85827047|gb|EAQ47243.1| hypothetical protein MED193_18659 [Roseobacter sp. MED193]
Length = 399
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 22/200 (11%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-HRPYQGNIQNLTAAELD 74
++ ++GIGG+R A V + N + + Y NFG P G+I ++ AE+
Sbjct: 53 IDLFAGIGGLRVGFEAA--GGTCVFTSEWNRFSQETYSANFGDEHPLSGDITEISEAEIP 110
Query: 75 MYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFL---------KILELIPHTVKPPHML 124
AH LL+ PCQP++ G+ K++S RA FL ++ +I H P
Sbjct: 111 ---AHDVLLAGFPCQPFSIAGVSKKNSLGRAHGFLDETQGTLFFDVVRIIAH--HRPRAF 165
Query: 125 FVENVVGFETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ENV + D M IL D L E ++ + VP R R F R+ +
Sbjct: 166 LLENVKNLLSHDKGNTMRVILHALDELGYEVDHKVIDARSW-VPQHRERIFISGFRRDVP 224
Query: 182 FRCQLLNNQLLRSPSPLLGN 201
R L + + P+P L +
Sbjct: 225 TRFCLDDVVIPPGPNPRLSD 244
>gi|153955289|ref|YP_001396054.1| DNA methylase [Clostridium kluyveri DSM 555]
gi|146348147|gb|EDK34683.1| Predicted DNA methylase [Clostridium kluyveri DSM 555]
Length = 416
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 7 KNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ 66
+N G ++ ++GIGG+R D + V + + + A YE N+G +P+ G+I
Sbjct: 95 QNLGIKLTFIDLFAGIGGIRLGF--EDKYTKCVFSSEWDKYAAQTYEANYGEKPH-GDIT 151
Query: 67 NLTAAELDMYGAHAWLLSPPCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPH 122
+ E D+ L PCQP++ R+G ++ F L+IL+ K P
Sbjct: 152 KIN--ENDIPDHDVLLAGFPCQPFSNIGKREGFAHETQGTLFFDVLRILK-----KKQPK 204
Query: 123 MLFVENVVGFETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLA 175
M +ENV G T+D IL N L ++ FG+P R R +
Sbjct: 205 MFLLENVKGLLTNDNGNTFRVILDNLKSLGYSVFYEVMDAQNFGLPQRRERIVIVG 260
>gi|391230864|ref|ZP_10267070.1| DNA-methyltransferase Dcm [Opitutaceae bacterium TAV1]
gi|391220525|gb|EIP98945.1| DNA-methyltransferase Dcm [Opitutaceae bacterium TAV1]
Length = 412
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 154/402 (38%), Gaps = 55/402 (13%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLTAAEL- 73
++ +SG GG+ +A S +V DI+ A++ + NF + +G+I L+ E+
Sbjct: 18 VDIFSGAGGLAEGFRQAGFS--IVSGSDIDSFASETFRFNFPESSFFEGDIAELSGQEIL 75
Query: 74 ---DMYGAHAWLL--SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
D+ L PPCQ ++ + A F + L L+ P L +EN
Sbjct: 76 QSTDIADGEIDCLIGGPPCQAFSYNSHLRTHEGQVAGLFREYLRLVGELN--PRYLVMEN 133
Query: 129 VVGFETSDTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
V G + + EI L Y T I+ +GVP R R +A R L
Sbjct: 134 VPGILSVGDGGVVGEIASRLGELGYETDGRIVYAEDYGVPQQRRRMIFVASRIGLPANIF 193
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLE-FSNSGD-----Q 239
+ PSP V +H WD CDP R + +S GD
Sbjct: 194 PVGTH---GPSP------KPVSNEHVH---RWDP--NPCDPPSRLVRVWSAIGDLPVTVS 239
Query: 240 VNTETGFLSTGTAAVDDFG--AAEETVEV--DRCVSID-HFLVPLSLIERWGSAMDI--- 291
E+ L T A DF A E ++ V C + + L +S + + GS DI
Sbjct: 240 TTDESKALGYRTGAWCDFQRYAREGSLGVLNHHCAGLGPNSLARISHVPQGGSWRDIPRH 299
Query: 292 VYP---DSKRCCCFTKSYYRYVKGTGSLLATVQPK-NKGKASSLKEQHLRYFTPREVANL 347
+ P R TK Y R L TV K + + R T RE A L
Sbjct: 300 LLPAGMQRARTSDHTKRYGRLAPK--DLACTVLTKCDPHWGCYIHPNEDRVLTVREAARL 357
Query: 348 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQA 389
SFP F F L Q Y L+GNS V PLL AQ+
Sbjct: 358 QSFPDRFNF-IGPQLAQ-YRLVGNS-----VPPLLARSIAQS 392
>gi|317480905|ref|ZP_07939986.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36]
gi|316902990|gb|EFV24863.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36]
Length = 441
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 11/169 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++G+GG +L K + + V A +I + +YE N G + G+I N E
Sbjct: 5 KFIDLFAGLGGFHLALEK--LGCECVFASEIQTELRTLYERNHGIICH-GDI-NEVDIEK 60
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVVGF 132
D+ PCQP+++ G QK D R F KI +++ K P +F+ENV
Sbjct: 61 DIPEHDILCGGFPCQPFSQAGKQKGFGDENRGNLFYKIWDIL--QCKKPEFVFLENVPNL 118
Query: 133 ETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
++ D T+ + E L+ Y Q+ I+SP FG+P R R + + + K
Sbjct: 119 KSHDEGNTYRVIHETLSRL-YDIQDDIISPHYFGIPQHRTRIYIVGRLK 166
>gi|344202630|ref|YP_004787773.1| DNA-cytosine methyltransferase [Muricauda ruestringensis DSM 13258]
gi|343954552|gb|AEM70351.1| DNA-cytosine methyltransferase [Muricauda ruestringensis DSM 13258]
Length = 415
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 163/420 (38%), Gaps = 64/420 (15%)
Query: 14 RVLEFYSGIGGMRYSLMKAD----VSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNL 68
+V E ++G+GG R L V + E A+ VYE FG + NI+N+
Sbjct: 5 KVCELFAGVGGFRLGLENTGHYKVVWSNQWEPATKMQHASLVYEARFGTGNHSNTNIENV 64
Query: 69 TAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSD---ARAFSFLKILELIPHTVKPPHML 124
+E+ H L+ PCQ Y+ K S + + I ++ P L
Sbjct: 65 ETSEIP---DHDMLVGGFPCQDYSVATSLKNSKGLIGKKGVLWWSIHRILSEKTNKPKYL 121
Query: 125 FVENVVGFETSDTH------AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
F+ENV S + A M+ L+N Y + +++ ++G+P R R F +A K
Sbjct: 122 FLENVDRLLKSPSSQRGRDFAVMLRSLSNLGYAVEWHVINAAEYGMPQRRRRVFFMAYLK 181
Query: 179 PLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGD 238
F +LL + +L ++ DQ + L S D E + S++
Sbjct: 182 GTPFFKKLLKSH---PKDWILKEGTISAAFPVDQTAQN----LVSFDLEEDLVALSHN-- 232
Query: 239 QVNTETG---FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPD 295
NTE G FL++G + D +I LS I GS Y D
Sbjct: 233 -FNTEKGLSPFLNSGVCVNGKVSTLKTVPSYDGKRTI------LSDILENGSIPSEYYID 285
Query: 296 ------------SKRCCCFTKSYYRYVKGTGSLL---ATVQPK-----NKGKASSLKEQH 335
K+ TK+ + Y GS++ A QP +G S + +H
Sbjct: 286 DADLPKWEYLKGGKKEIRKTKAGFEYNYSEGSMVFPDALDQPSRTIITGEGGKSPSRFKH 345
Query: 336 -------LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
LR P E+ L+ FP + + +S +R +GN+L + +V + LF +
Sbjct: 346 VVQTSKGLRRLLPVELERLNMFPDNHTQLNGISDAKRAFFMGNALVVGIVEQVGASLFRK 405
>gi|219855710|ref|YP_002472832.1| hypothetical protein CKR_2367 [Clostridium kluyveri NBRC 12016]
gi|219569434|dbj|BAH07418.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 419
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 7 KNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ 66
+N G ++ ++GIGG+R D + V + + + A YE N+G +P+ G+I
Sbjct: 98 QNLGIKLTFIDLFAGIGGIRLGF--EDKYTKCVFSSEWDKYAAQTYEANYGEKPH-GDIT 154
Query: 67 NLTAAELDMYGAHAWLLSPPCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPH 122
+ E D+ L PCQP++ R+G ++ F L+IL+ K P
Sbjct: 155 KIN--ENDIPDHDVLLAGFPCQPFSNIGKREGFAHETQGTLFFDVLRILK-----KKQPK 207
Query: 123 MLFVENVVGFETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLA 175
M +ENV G T+D IL N L ++ FG+P R R +
Sbjct: 208 MFLLENVKGLLTNDNGNTFRVILDNLKSLGYSVFYEVMDAQNFGLPQRRERIVIVG 263
>gi|325913633|ref|ZP_08175995.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B]
gi|325476992|gb|EGC80142.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B]
Length = 372
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 15/171 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++GIGG+R + + V + + + A Y+ NFG P G+I ++A+ +
Sbjct: 57 KFIDLFAGIGGIRLGFEGDSKNTECVYSSEWDKYAQKTYQANFGVMP-DGDITKVSASSI 115
Query: 74 DMYGAHAWLLSPPCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ + L PCQP++ R+G ++ F L+IL+ H P +ENV
Sbjct: 116 PNF--NVLLAGFPCQPFSSIGKREGFANKTQGTLFFDILRILKY--HM---PEAFLLENV 168
Query: 130 VGFET---SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
G T +T +I L + Y +L FG+ SR R + R
Sbjct: 169 PGLLTIQHGETFKVIISALEEAGYSVHHTVLEASDFGLAQSRKRVIIVGFR 219
>gi|149373126|ref|ZP_01892014.1| DcmB [unidentified eubacterium SCB49]
gi|149354274|gb|EDM42843.1| DcmB [unidentified eubacterium SCB49]
Length = 349
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 143/394 (36%), Gaps = 88/394 (22%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLTAAE 72
+++ F++G GG+ +A + V+ A + + + + YE N + + +I N+ A E
Sbjct: 2 KIVSFFAGAGGLDLGFQQAGFN--VIWANEYDKEIWETYEKNHPNTILDKRSIVNIPADE 59
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENV 129
+ + PPCQ ++ G + D R + F++ILE K P ENV
Sbjct: 60 VPE--CDGIIGGPPCQSWSEAGAARGIKDKRGQLFYDFIRILE-----AKQPKFFLAENV 112
Query: 130 VGFETSDTHAKMIEIL------ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
G S H + +E + A Y +L+ + VP R R F + RK L+F+
Sbjct: 113 SGMLIS-KHTEALEGIKELFRNAGIGYELSFQMLNASDYNVPQDRKRVFFIGIRKDLNFK 171
Query: 184 CQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTE 243
Q + P +D L E P LE++N+
Sbjct: 172 YQFPTETFPKIPL-----------------EDVISDLQEGVLPA---LEYNNTNG----- 206
Query: 244 TGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFT 303
D CV +H E + ++ R +
Sbjct: 207 -----------------------DNCVVPNH--------EYMIGSFSTIFMSRNRVRSWD 235
Query: 304 KSYYRYVKGTGSLLATVQP---------KNKGKASSLKEQHLRYFTPREVANLHSFPGDF 354
+ Y G A + P KNK KE R + RE A + +FP DF
Sbjct: 236 EQ--SYTIQAGGRHAPIHPQAPKMKFIEKNKRIFVPGKEHLYRRLSVRECARIQTFPNDF 293
Query: 355 QFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
F H+ + Y ++GN++ + + L + Q
Sbjct: 294 IF-HYKKVAAGYKMIGNAVPVNLAKFLANSIMEQ 326
>gi|315917403|ref|ZP_07913643.1| type II restriction-modification system methylation subunit
[Fusobacterium gonidiaformans ATCC 25563]
gi|313691278|gb|EFS28113.1| type II restriction-modification system methylation subunit
[Fusobacterium gonidiaformans ATCC 25563]
Length = 320
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 17/202 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA----NDVYELNFGHRPYQGNIQ 66
E +++E + GIG +R + ++ + QV++ +I+ N +Y +F +
Sbjct: 5 ETIKIIELFGGIGAIRKAFIRQKIPHQVIDYVEIDKNCVKSYNALYNTDFKPKSILDFHP 64
Query: 67 NLTAAELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHM 123
+L M+G+ PCQ ++R GL+K + S R+ + + +I P +
Sbjct: 65 PDERIDLLMHGS-------PCQDFSRSGLKKGGEKGSGTRSSLLFETIRIIEEMKIRPKI 117
Query: 124 LFVENVVGFETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPL 180
+ ENV G + A L + L E IL+ + FG+P R R F ++
Sbjct: 118 VLWENVKGVLDKNMRASFFHYLKEMERLGYENKYEILNAMDFGIPQKRERIFVVSILGNN 177
Query: 181 SFRCQLLNNQLLRSPSPLLGND 202
SF L R S + D
Sbjct: 178 SFDFAKLEKTQTRDISEFIEKD 199
>gi|187778292|ref|ZP_02994765.1| hypothetical protein CLOSPO_01884 [Clostridium sporogenes ATCC
15579]
gi|187771917|gb|EDU35719.1| DNA (cytosine-5-)-methyltransferase [Clostridium sporogenes ATCC
15579]
Length = 355
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ + GIG +R +A + V + + + +Y + FG P G+I A EL
Sbjct: 2 KFIDMFCGIGTVRMGFEQA--GHECVYSIEWDKWKRKIYSIIFGGEPEGGDITKCRANEL 59
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP--PHMLFVENVVG 131
+ W PCQ ++ G ++ R+ ++ L + P L ENV G
Sbjct: 60 PK--SDCWCFGAPCQDFSVAGKREGLEGDRSSLVREVFRLCGEIEEEHRPQWLLYENVKG 117
Query: 132 FETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLA 175
+S+ +EIL D L + +L+ FGVP +R R F +
Sbjct: 118 MLSSNKGLDYLEILFEMDSLGYDIEWQLLNSKDFGVPQNRERVFTIG 164
>gi|152994008|ref|YP_001359729.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1]
gi|151425869|dbj|BAF73372.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1]
Length = 362
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 155/393 (39%), Gaps = 56/393 (14%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE-LD 74
++ +SG GGM + A ++ + FD + A Y+ N H +++ E L
Sbjct: 8 VDIFSGAGGMSIGAVMAGITPVLAVEFD--EHAAATYKANHPHTNVLA--KDIKGVEPLK 63
Query: 75 MYGAHAWLL--SPPCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVENVVG 131
H +LL PPCQ ++ + ++ D + F + + +KP +F ENVVG
Sbjct: 64 HVEKHPFLLFGGPPCQGFSVANTKTRNLDNPNNWMFREYCRFV-EDLKPDWFVF-ENVVG 121
Query: 132 FETSDTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 188
F++ D +E+ L + Y T +L+ FGVP R R+F + RK +
Sbjct: 122 FKSFDKGRFAVEVEKELKSLGYKTNSSVLNAADFGVPQYRNRFFIIGHRKEKG-GIKFDF 180
Query: 189 NQLLRSPSPLLGN--DDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 246
+ L + P +G D+ + D+ ++ K ++ P + +
Sbjct: 181 DSLEKKPKVTVGEALKDLPSLKNGDKIKEAAYKRVKQVHPYVKLIR-------------- 226
Query: 247 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 306
T A+ + V+R +I E W +A KR T S
Sbjct: 227 -RTSKKALQNHVTHSRPHIVERYEAIKQG-------ENWEAA-------KKRGLLETYSS 271
Query: 307 YRYV-KGTGSLLATVQP----KNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLS 361
++ G L +P N K+ + R + RE A L SFP DF F LS
Sbjct: 272 TKHTHSGIYKRLKEDEPAVTIANYRKSMLIHPHEHRGLSLREAARLQSFPDDFIFKGPLS 331
Query: 362 LRQRYALLGNS----LSIAVVAPLLQYLFAQAG 390
+Q+ +GN+ LS + ++Q A G
Sbjct: 332 FQQQQ--VGNAVPPLLSKVIFEKIIQLSSANVG 362
>gi|384887473|ref|YP_005761984.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori 52]
gi|261839303|gb|ACX99068.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori 52]
Length = 348
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 146/384 (38%), Gaps = 51/384 (13%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPYFELIWANDIDKDAILSYQAN--HKKTQTILCDIMQLN 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VVG + ++ Y+ + IL+ L +GVP R R + K SF+
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK--SFK-- 169
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
Q P P I H D+ L P++ +GD + G
Sbjct: 170 ----QKFHFPKP---------IKTHFSLKDA----LGDLPPIQS----GENGDAL----G 204
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
+L +F + + + L+ + + G + D + + + +T +
Sbjct: 205 YLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKNLRPKSGYTNT 264
Query: 306 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
Y + + T + + + R + RE A L SFP +++F + S +
Sbjct: 265 YAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKF--YGSSSAK 322
Query: 366 YALLGNSLSIAVVAPLLQYLFAQA 389
+GN+ V PLL AQA
Sbjct: 323 RLQIGNA-----VPPLLSVALAQA 341
>gi|256819660|ref|YP_003140939.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271]
gi|256581243|gb|ACU92378.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271]
Length = 318
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 88/177 (49%), Gaps = 22/177 (12%)
Query: 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNI---- 65
G++ + ++ ++G+GG RY+L ++ A+ V + + + A Y+LN+G P+ G+I
Sbjct: 2 GKSVKFIDLFAGVGGFRYALQ--NIGAECVFSSEWDKFAQQTYKLNYGEVPF-GDITLQE 58
Query: 66 -QNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
++ E D+ A PCQ ++ G QK D R F +I E++ P ++
Sbjct: 59 TKDNIPNEFDILCA-----GFPCQAFSIAGYQKGFEDIRGTLFFEIEEIVRK--HRPKVI 111
Query: 125 FVENVVGFETSDTHAKMIEILANS-----DYLTQEFILSPLQFG-VPYSRPRYFCLA 175
F+ENV + D K +++ N Y +L+ +++ +P +R R F +A
Sbjct: 112 FLENVKNLVSHD-KGKTFKVITNILEEKLGYKIFYKVLNTMEYANIPQNRERIFIVA 167
>gi|419705088|ref|ZP_14232629.1| cytosine-specific DNA methylase [Mycoplasma canis UFG1]
gi|384395671|gb|EIE42100.1| cytosine-specific DNA methylase [Mycoplasma canis UFG1]
Length = 413
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 91/423 (21%), Positives = 171/423 (40%), Gaps = 65/423 (15%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++ ++ +SGIGG + MK + + V + +I+ A YE N+ P ++T
Sbjct: 3 KKFKFIDLFSGIGGF-HQAMKV-LGGECVFSSEIDPFAIQTYEENYKINPKN----DITK 56
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLF--V 126
E H L + PCQ +++ G Q D + F I+ ++ T K P+++ V
Sbjct: 57 VEASDIPVHDVLCAGFPCQAFSKAGSQLGFEDKIKGTLFFDIVRIL-KTHKTPYIILENV 115
Query: 127 ENVVGFETSDTHAKMIEILANSDYLTQE--FILSPLQFGVPYSRPRYFCLAKRKPLSFRC 184
N+V + T + E L Y+ E I+SP G+P R R L K + +
Sbjct: 116 RNLVSHDKGRTWEIIKESLIQLGYVITENPIIISPHHIGIPQHRERVLILGVHKSVGIKQ 175
Query: 185 QLLNNQLLRSPSPLLGNDDMT---------VITKHDQ-PDDSWDKLLESCDPVERFLEFS 234
+N Q + + + ++ I++H++ + W++ ++ F+
Sbjct: 176 LNINFQKINKNDINIFDSNILERSNKLEEYFISEHEELVLNCWNEFIKGIS----FIPVK 231
Query: 235 N--SGDQVNTETGFLSTGTAAVDDFGAAE-----------ETVEVDRCVSIDHFLVPLSL 281
N S + + E V++F E E + +R + +++
Sbjct: 232 NPKSNNYIKKEFDGTIGFPIWVNEFNNYEVNMNDIPKWKKEIILKNRSLYVNNKEFIDKW 291
Query: 282 IERWGSAMDIVYPDSK---RCCCFTKSYYRYV---KGTG----------SLLATVQPKNK 325
+ +W + + K +C K + + + +G +L+A VQ
Sbjct: 292 LSKWNYLKNFSNTEKKMEWQCGNSCKEIWDGIIQFRPSGIRVKSPNIFPALVAMVQIPII 351
Query: 326 GKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
GK R TPRE A L SFP F+ H + Q Y GN+++I V++ + + L
Sbjct: 352 GKLK-------RRLTPREAARLQSFPDSFKI--HENKYQAYKQFGNAVNINVISFIAEQL 402
Query: 386 FAQ 388
Q
Sbjct: 403 LQQ 405
>gi|345515584|ref|ZP_08795085.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei 5_1_36/D4]
gi|423309031|ref|ZP_17287021.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T12C37]
gi|229436216|gb|EEO46293.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei 5_1_36/D4]
gi|392685770|gb|EIY79081.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T12C37]
Length = 374
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 86 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK---PPHMLFVENVVGFETSDTHAKMI 142
PCQP++ GL++ D R F I ++ + PP +LF+ENV G +T +
Sbjct: 89 PCQPFSIAGLRRGFEDTRGTLFFNIANIVKQKIDSGIPPKVLFLENVKGLKTHMKGETLK 148
Query: 143 EILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPL 180
ILA D L + +L+ FGVP +R R F +A K +
Sbjct: 149 TILATLDELGYAYNYDVLNAKYFGVPQNRERLFIVAWYKDI 189
>gi|385324950|ref|YP_005879389.1| putative type II restriction-modification system enzyme Mod
[Neisseria meningitidis 8013]
gi|261393337|emb|CAX50970.1| putative type II restriction-modification system enzyme Mod
[Neisseria meningitidis 8013]
Length = 330
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 17/197 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA-- 71
+ ++ ++G GG+ +A +V AF+ DKA D+Y NF H Y+ ++ + A
Sbjct: 2 KCIDLFAGCGGLSLGFEQAGF--EVCAAFEKWDKAIDIYRKNFNHPVYETDLTDEQTAIS 59
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVEN 128
++ Y + PPCQ ++ G ++ + RA + F I+ P +EN
Sbjct: 60 QISNYQPDLIMGGPPCQDFSSAG-KRDVTLGRADLTYHFANIV-----CSAHPTWFVMEN 113
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK-RKPLSFRCQLL 187
V + S +I+ +DY IL GVP +R R+F + K + +F +L
Sbjct: 114 VEQIKKSHILHDVIKQFMQADYGLTSVILDASYCGVPQARTRFFLIGKLGEEHNFLTPIL 173
Query: 188 NNQLLRSPSPL---LGN 201
++L P + LGN
Sbjct: 174 TDRLADKPMTVRDYLGN 190
>gi|281420730|ref|ZP_06251729.1| DNA (cytosine-5-)-methyltransferase [Prevotella copri DSM 18205]
gi|281405022|gb|EFB35702.1| DNA (cytosine-5-)-methyltransferase [Prevotella copri DSM 18205]
Length = 432
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 10/176 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF--GHRPYQGNIQNLTAA 71
R+ +SGIG + ++ + ++ ++V A DI K Y N+ + +I+ A
Sbjct: 58 RIGTLFSGIGAIEHAFQRLGLNHKIVFAGDIEPKCKISYFANYKINEEDWFTDIREFDAT 117
Query: 72 ELDMYGAHAWLLS-PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ G +++ PCQ ++ G + DAR F + ++ T P + ENV
Sbjct: 118 KYK--GKVDFIVGGAPCQAFSMVGHRLGFEDARGTLFYEFARVVKET--EPKVFLFENVR 173
Query: 131 GFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
G + D T + +I Y + +L+ +G+P R R FCL +KP F+
Sbjct: 174 GLLSHDKGRTWHVIHDIFEELGYDVKFRVLNSCDYGIPQHRERVFCLGFKKPTDFK 229
>gi|261400408|ref|ZP_05986533.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970]
gi|269209852|gb|EEZ76307.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970]
Length = 362
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 10/167 (5%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++ ++GIGG R ++ ++ + V + + ++KA YE NFG P+ G+I +
Sbjct: 39 IDLFAGIGGFRIAMQ--NLGGECVFSSEWDEKAKQTYEANFGEVPF-GDITLEETKQCIP 95
Query: 76 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 135
PCQ ++ G + D R F + E+I P F+ENV G
Sbjct: 96 EQFDVLCAGFPCQAFSIAGRRGGFEDTRGTLFFDVAEIIRR--HRPKAFFLENVKGLTNH 153
Query: 136 DTHAKMIEILAN-----SDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
D + IL ++ + I++ FGVP +R R F + R
Sbjct: 154 DRGRTLQTILNTLREDLGYFVPEPEIVNAKDFGVPQNRERIFIVGFR 200
>gi|269986305|gb|EEZ92611.1| DNA-cytosine methyltransferase [Candidatus Parvarchaeum acidiphilum
ARMAN-4]
Length = 349
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKAN-DVYELNFGHRPYQGNIQNLTAAEL 73
++ +SG GG+ A +V A D NDKA + YE NFGH+ +I ++ +
Sbjct: 5 LISLFSGCGGLDLGFRNAGFG--IVFAND-NDKAVWETYEKNFGHKLDGRSIIDIKSE-- 59
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
D+ A + PPCQ ++ G + +D R F + + +I K P ENV G
Sbjct: 60 DLPDADGIIGGPPCQSWSLAGAMRGINDERGQLFYEYIRVIRD--KQPKFFVAENVPGML 117
Query: 134 TSDTHA----KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
+S TH K+I + Y I +GVP R R + RK + F
Sbjct: 118 SS-THKSEFNKIINQMERLGYRVSYNIYDARNYGVPQERKRVIIVGYRKDIGF 169
>gi|313668796|ref|YP_004049080.1| C-5 cytosine-specific DNA-methylase [Neisseria lactamica 020-06]
gi|313006258|emb|CBN87720.1| C-5 cytosine-specific DNA-methylase [Neisseria lactamica 020-06]
Length = 362
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 10/167 (5%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++ ++GIGG R ++ ++ + V + + ++KA YE NFG P+ G+I +
Sbjct: 39 IDLFAGIGGFRIAMQ--NLGGECVFSSEWDEKAKQTYEANFGEVPF-GDITLEETKQCIP 95
Query: 76 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 135
PCQ ++ G + D R F + E+I P F+ENV G
Sbjct: 96 EQFDVLCAGFPCQAFSIAGRRGGFEDTRGTLFFDVAEIIRR--HRPKAFFLENVKGLTNH 153
Query: 136 DTHAKMIEILAN-----SDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
D + IL ++ + I++ FGVP +R R F + R
Sbjct: 154 DRGRTLQTILNTLREDLGYFVPEPEIVNAKDFGVPQNRERIFIVGFR 200
>gi|157961098|ref|YP_001501132.1| DNA-cytosine methyltransferase [Shewanella pealeana ATCC 700345]
gi|157846098|gb|ABV86597.1| DNA-cytosine methyltransferase [Shewanella pealeana ATCC 700345]
Length = 406
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 32/194 (16%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-----YQGNIQNLT 69
++ +SG GG+ L +A + ++ + +I++ A +LN +P G+I LT
Sbjct: 1 MISLFSGAGGLDIGLCEAGFTNRL--SVEIDEDAQKTLKLN---QPSLKLATPGDIHKLT 55
Query: 70 AAEL----DMYGAHAWLLS--PPCQPYTRQGLQKQS-----SDARAFSFLKILELIPHTV 118
+EL + LL+ PPCQP+++ G + +D RA + L+++ V
Sbjct: 56 PSELLRQSGLQPKELTLLAGGPPCQPFSKSGYWAKGDTDRLTDPRAETLTAYLDIV--KV 113
Query: 119 KPPHMLFVENVVGFETSD---------THAKMIEILANSDYLTQEFILSPLQFGVPYSRP 169
P +L +ENV G SD T I N+ Y+ + ++ +GVP R
Sbjct: 114 ALPQVLLLENVKGIAYSDKDEGLQLLITELNNINSEMNTSYMPEVITVNASSYGVPQHRE 173
Query: 170 RYFCLAKRKPLSFR 183
R F +A R +F+
Sbjct: 174 RVFIVANRDGGTFK 187
>gi|420398545|ref|ZP_14897758.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
gi|393015219|gb|EJB16390.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
Length = 352
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPYFELIWANDIDKDAILSYQAN--HKKTQTILCDIMQLN 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ DY+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERDYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|167887558|gb|ACA05982.1| tRNA aspartic acid methyltransferase 1 variant 5 [Homo sapiens]
Length = 117
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH 58
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF H
Sbjct: 2 EPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH 49
>gi|386826504|ref|ZP_10113611.1| DNA-methyltransferase Dcm [Beggiatoa alba B18LD]
gi|386427388|gb|EIJ41216.1| DNA-methyltransferase Dcm [Beggiatoa alba B18LD]
Length = 319
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 12/175 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ ++GIGG+R +D A +Y NF +P+ G+I + +
Sbjct: 2 YKTIDLFAGIGGIRLGFEAHKCKNVFSSEWD--KDAQKMYFANFNEQPH-GDINLIQPKD 58
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H LL+ PCQP++ G +D R F I ++ K P +ENV
Sbjct: 59 IP---DHDILLAGFPCQPFSIAGKGLGFADTRGTLFFNIETIL--ATKRPRAFLLENVKR 113
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
T D T A ++E L +Y +L+ L FG+P R R + + +PL+F+
Sbjct: 114 LTTHDNGKTFAIILEKLQQLNYSVFYQVLNSLDFGLPQKRERIYIVGFSQPLNFQ 168
>gi|111607698|gb|ABH10736.1| DNA methyltransferase [Flavobacterium sp. 4H]
Length = 408
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 20/174 (11%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNI-----Q 66
+++ ++ ++GIGG R +L +V + V + N++A Y NFG P+ G+I +
Sbjct: 94 SFKFIDLFAGIGGFRLALQ--NVGGKCVFTSEWNNEAQKTYRENFGEVPF-GDITKERNK 150
Query: 67 NLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
N + D+ A PCQ ++ G QK +D R F I +++ P ++F+
Sbjct: 151 NYIPEKFDILCA-----GFPCQAFSIAGYQKGFADTRGTLFFDIEQIVEK--HKPKVVFL 203
Query: 127 ENV---VGFETSDTHAKMIEILA-NSDYLTQEFIL-SPLQFGVPYSRPRYFCLA 175
ENV V + +T +IE L Y T +L S VP +R R F +A
Sbjct: 204 ENVKNLVSHDNGNTFKTIIETLELKLGYKTFAKVLNSATHANVPQNRERIFIVA 257
>gi|217033040|ref|ZP_03438509.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128]
gi|298736593|ref|YP_003729119.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|216945239|gb|EEC23921.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128]
gi|298355783|emb|CBI66655.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 351
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 152/389 (39%), Gaps = 61/389 (15%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y K +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGFSKHPY-FELIWANDIDKDAILSYQAN--HKEAQTILCDIVQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L + L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVSINILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLVK-----PKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VVG + ++ DY+ + IL+ L +GVP R R + K SF+
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERDYILEHAILNALDYGVPQIRERVILVGALK--SFK-- 169
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
Q P P I H D+ L P++ +GD + G
Sbjct: 170 ----QKFHFPKP---------IKTHFSLKDALGDL----PPIQS----GENGDAL----G 204
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
+L +F + + + L+ + + G + D + P+S R KS
Sbjct: 205 YLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDL-PESLR----PKS 259
Query: 306 YY--RYVKGTGSLLATVQPKNKGKASSLKEQH---LRYFTPREVANLHSFPGDFQFPHHL 360
Y Y K A +N SS + H R + RE A L SFP +++F
Sbjct: 260 GYINTYAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIRERARLQSFPDNYKFCGSA 319
Query: 361 SLRQRYALLGNSLSIAVVAPLLQYLFAQA 389
S ++ +GN+ V PLL A A
Sbjct: 320 SAKR--LQIGNA-----VPPLLSVALAHA 341
>gi|167887556|gb|ACA05980.1| tRNA aspartic acid methyltransferase 1 variant 6 [Homo sapiens]
Length = 71
Score = 58.9 bits (141), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH 58
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF H
Sbjct: 2 EPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH 49
>gi|91206207|ref|YP_538562.1| site-specific DNA methylase [Rickettsia bellii RML369-C]
gi|91069751|gb|ABE05473.1| Site-specific DNA methylase [Rickettsia bellii RML369-C]
Length = 308
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 83/173 (47%), Gaps = 12/173 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ + GIGG R +L ++ + V + DI+ + Y+ NFG +P+ G+I + A +
Sbjct: 2 YKFIDLFCGIGGFRKALESKNL--ECVFSSDIDKDVQEAYKRNFGDKPH-GDITEMPANK 58
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ H L + PCQ ++ G + D F +I+ + + P++L +ENV
Sbjct: 59 IP---KHDILCAGFPCQSFSISGKRGGIEDNNGKLFYEIIRIAQY--HKPYILLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ + + + + L Y IL+ FGVP +R R + + RK S
Sbjct: 114 ILNIDNGNVIKTIDQKLEEIGYKVYRHILNASLFGVPQARERVYFVCLRKDFS 166
>gi|410638483|ref|ZP_11349044.1| DNA (cytosine-5-)-methyltransferase [Glaciecola lipolytica E3]
gi|410141892|dbj|GAC16249.1| DNA (cytosine-5-)-methyltransferase [Glaciecola lipolytica E3]
Length = 420
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 43/228 (18%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL 68
DG+ +R ++ ++GIGG+R + FD A Y+ N G P+ G+I +
Sbjct: 93 DGK-FRFIDLFAGIGGVRLGFQQNGGICVFSSEFD--KHAQQTYKNNHGEIPF-GDITKI 148
Query: 69 TAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
A+E+ H LL+ PCQP++ GL+ D R F I ++ K P +E
Sbjct: 149 PASEIP---DHDILLAGFPCQPFSHAGLKLGIEDTRGTLFHDIANIL--ETKKPKFALLE 203
Query: 128 NVVGFETSD---THAKMIEILANSDY-------------------LTQEFILSPLQFGVP 165
NV G + D T +++ L Y L +E +L + FG+P
Sbjct: 204 NVKGLISHDKGYTLKVILKTLTKMGYSCNIPKSVIEHGSTKEIQALAKEMVLKSVDFGIP 263
Query: 166 YSRPRYFCLAKR----------KPLSFRCQLLNNQLLRSPSPLLGNDD 203
+R R + + R PL + + + L +P P L D
Sbjct: 264 QNRQRIYIVLWRDGEVKSFEYPNPLGIEVK-VGDMLEENPDPKLTISD 310
>gi|127427|sp|P17044.1|MTBF_BACSU RecName: Full=Modification methylase BsuFI; Short=M.BsuFI; AltName:
Full=Cytosine-specific methyltransferase BsuFI
gi|39984|emb|CAA35888.1| unnamed protein product [Bacillus subtilis]
Length = 409
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 7 KNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ 66
+N G ++ ++GIGG+R D + V + + + A YE N+G +P+ G+I
Sbjct: 95 QNRGIKLTFIDLFAGIGGIRLGF--EDKYTKCVFSSEWDKYAAQTYEANYGEKPH-GDIT 151
Query: 67 NLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
+ E D+ L PCQP++ G ++ + R +L ++ K P M +
Sbjct: 152 KIN--ENDIPDQDVLLAGFPCQPFSNIGKREGFAHERRNIIFDVLRILKK--KQPKMFLL 207
Query: 127 ENVVGFETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLA 175
ENV G T+D IL N L ++ FG+P R R +
Sbjct: 208 ENVKGLLTNDNGNTFRVILDNLKSLGYSVFYEVMDAQNFGLPQRRERIVIVG 259
>gi|297686112|ref|XP_002820609.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Pongo
abelii]
Length = 63
Score = 58.9 bits (141), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH 58
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF H
Sbjct: 2 EPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH 49
>gi|322510834|gb|ADX06148.1| putative C-5 cytosine-specific DNA methyltransferase [Organic Lake
phycodnavirus 1]
Length = 344
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 10/170 (5%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
E + ++ + GIG YS K + V + DI+ + Y+ N+G P G+I +
Sbjct: 67 ENIKFIDLFCGIGSFHYSFKK--LGWDCVMSCDIDKAVKETYKSNYGILPL-GDITEIEP 123
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ Y PCQP+++ G K D R F I++ + + P ++ +ENV+
Sbjct: 124 KNITNY--DILCAGFPCQPFSQCGQHKGFDDKRGTLFFNIMKFVDY--HKPKVIILENVM 179
Query: 131 GFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
G D T K+ + S+Y ++ +G+P R R + R
Sbjct: 180 GLLNHDGGKTFEKIKCDIETSNYSITYKVIKCSDYGLPQMRKRLIIVGVR 229
>gi|428779076|ref|YP_007170862.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428693355|gb|AFZ49505.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 468
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 36/192 (18%)
Query: 3 KDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ 62
K C+N + ++ ++GIGG R +L K + + + +I+ A +VY+ NF
Sbjct: 19 KSFCQN---RFTFIDLFAGIGGFRIALEK--LGGKCLGYSEIDRDAREVYQKNF------ 67
Query: 63 GNIQNLTAAELDMYGAHA-----WLL-----SPPCQPYTRQGLQKQSSDARA---FSFLK 109
I + + E+D+ W + PCQP++ G D R F ++
Sbjct: 68 --INYVNSDEIDLGDVKQIHHLPWRIDLIVGGVPCQPWSIAGKSGGFDDPRGRLWFDVIR 125
Query: 110 ILELIPHTVKPPHMLFVENVVGFETSDTHAK----MIEILANSDYLTQEFILSPLQFGVP 165
I+EL P ENV G T H K ++E L NS Y Q +L+ FG+P
Sbjct: 126 IVEL-----NQPQGFIFENVKGL-TDPRHQKSFSYILESLTNSGYQVQWKVLNSYDFGLP 179
Query: 166 YSRPRYFCLAKR 177
R R F + +
Sbjct: 180 QDRQRVFIVGNK 191
>gi|49476998|ref|YP_035184.1| modification methylase HpaII (cytosine-specific methyltransferase
HpaII) [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49328554|gb|AAT59200.1| modification methylase HpaII (Cytosine-specific methyltransferase
HpaII) [Bacillus thuringiensis serovar konkukian str.
97-27]
Length = 373
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 149/403 (36%), Gaps = 80/403 (19%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ L+ ++GIGG+R V+ A +I+ A YE + P ++T+AE
Sbjct: 3 YKTLDLFAGIGGIRRGFELTGRFENVLSA-EIDQYACQTYEHLYSENPKN----DVTSAE 57
Query: 73 ----LDMYGAHAWLLSPPCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVE 127
++ L PCQ ++ G ++ D R F + ++I T P +E
Sbjct: 58 FKEKVEKLTYDVLLGGFPCQAFSTAGKKEGFRDKTRGTLFFDVADIIERT--RPKAFLLE 115
Query: 128 NVVGF---ETSDTHAKMIEILA--------------NSD--YLTQEFILSPLQFGVPYSR 168
NV G + +T ++E L N + Y + F+L+ FGVP +R
Sbjct: 116 NVEGLIRHKKGETFKTILETLVIELDYKVIGVEKGENGELIYDPRSFLLNSRNFGVPQNR 175
Query: 169 PRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVE 228
PR + + N +L R D + + P K + D V
Sbjct: 176 PRIYIVG-----------FNQRLYR--------DKIESMPLFTLPKSRSRKKI--YDSVR 214
Query: 229 RFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSA 288
LE N G++ G+L T + G + + +V L IE S
Sbjct: 215 DVLE-DNVGEKYYLSEGYLETLKKHKEAQGK--------KGNGFGYSIVNLPEIENPVSN 265
Query: 289 MDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLH 348
+ S + Y + G L+ K K S L + +R TP E L
Sbjct: 266 ALLATGGSGKERNLIYDYNPDI--VGKLV-------KSKKSPLNSEGVRIMTPNEWGKLQ 316
Query: 349 SFPG----------DFQFPHHLSLRQRYALLGNSLSIAVVAPL 381
F G F FP +S QRY GNS++I V+ +
Sbjct: 317 GFVGYAFKSASGEDTFSFPEKMSDAQRYKQFGNSVTIPVIEEI 359
>gi|374599926|ref|ZP_09672928.1| DNA-cytosine methyltransferase [Myroides odoratus DSM 2801]
gi|423325087|ref|ZP_17302928.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CIP
103059]
gi|373911396|gb|EHQ43245.1| DNA-cytosine methyltransferase [Myroides odoratus DSM 2801]
gi|404607096|gb|EKB06630.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CIP
103059]
Length = 414
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 160/416 (38%), Gaps = 63/416 (15%)
Query: 14 RVLEFYSGIGGMRYSLMKAD----------VSAQVVEAFDINDKANDVYELNFGHRPYQG 63
+V+E ++G+GG R L KA+ V + E ++ A+ +YE +G +
Sbjct: 6 KVVELFAGVGGFRIGLEKANTELNDNFFDVVWSNQWEPSTVSQHASMIYENRWGGENHSN 65
Query: 64 -NIQNLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSD---ARAFSFLKILELIPHTV 118
NI+ + E+ H L+ PCQ Y+ K S + + I ++
Sbjct: 66 VNIEEVPTNEIP---NHDILVGGFPCQDYSVATTLKNSKGILGKKGVLWWSINRILTEKE 122
Query: 119 KPPHMLFVENVVGFETSDTH------AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYF 172
P L ENV S ++ A M++ L + Y + +++ +G+P R R F
Sbjct: 123 NKPRYLIFENVDRLLKSPSNQRGRDFAVMLKCLNDLGYAVEWRVINAADYGMPQKRRRVF 182
Query: 173 CLAKR---------KPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLES 223
+ + +N+ ++ + P+ G D V KH +DS + + E
Sbjct: 183 FIGYHITSEVYQTIDASDLQAWCINDGIIANAFPV-GTD--VVNEKHIAFNDSLNNISEE 239
Query: 224 CDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDH----FLVPL 279
+ EF N+G +N + TA V V D ++++ + +P
Sbjct: 240 FGKGRKISEFENAGIMINGQIY-----TAKVKPQYEGNRQVLKDILENVENVPQEYFIPD 294
Query: 280 SLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL--------ATVQPKNKGKASSL 331
I++W K F Y Y +G G + T+ GK+ S
Sbjct: 295 EDIDKWNYLKGAKKEIRKSSTGFE---YNYAEG-GMIFPDNIEDASRTIITGEGGKSPSR 350
Query: 332 ------KEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPL 381
E+ LR P E+ L+ FP + ++ +R L+GN+L +V L
Sbjct: 351 FKHVVKTEKGLRRLMPVELERLNMFPDNHTQQIGVTDTKRAFLMGNALVTGIVTKL 406
>gi|288928693|ref|ZP_06422539.1| modification methylase NgoBI (Cytosine-specific methyltransferase
NgoBI) [Prevotella sp. oral taxon 317 str. F0108]
gi|288329677|gb|EFC68262.1| modification methylase NgoBI (Cytosine-specific methyltransferase
NgoBI) [Prevotella sp. oral taxon 317 str. F0108]
Length = 309
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 12/173 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
R ++ ++GIGG+R ++ AQ V + + + A Y NFG P G+I + A ++
Sbjct: 3 RYVDLFAGIGGIRIPF--DELGAQCVFSSEWDKAACKTYAANFGDIP-SGDITKIAAEDI 59
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
H LL+ PCQ ++ G K D R F ++ ++ + P + +ENV
Sbjct: 60 P---PHQLLLAGFPCQAFSIMGQMKGFDDTRGTMFFEVARILDY--HKPKAVLLENVKQL 114
Query: 133 ETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
T D T + L + Y +L+ + FG+P R R + R +++
Sbjct: 115 TTHDRGKTFETIKATLRSLGYHINWRVLNAMDFGLPQKRERVIIVGFRDKMAY 167
>gi|27497145|gb|AAO17336.1| methylase [Neisseria lactamica]
Length = 384
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 10/167 (5%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++ ++GIGG R ++ ++ + V + + ++KA YE NFG P+ G+I +
Sbjct: 61 IDLFAGIGGFRIAMQ--NLGGECVFSSEWDEKAKQTYEANFGEVPF-GDITLEETKQCIP 117
Query: 76 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 135
PCQ ++ G + D R F + E+I P F+ENV G
Sbjct: 118 EQFDVLCAGFPCQAFSIAGRRGGFEDTRGTLFFDVAEIIRR--HRPKAFFLENVKGLTNH 175
Query: 136 DTHAKMIEILAN-----SDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
D + IL ++ + I++ FGVP +R R F + R
Sbjct: 176 DRGRTLQTILNTLREDLGYFVPEPEIVNAKDFGVPQNRERIFIVGFR 222
>gi|421713201|ref|ZP_16152532.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
gi|407216567|gb|EKE86404.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
Length = 351
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 153/390 (39%), Gaps = 63/390 (16%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-STHPHFELIWANDIDKDAILSYQAN--HKEAQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLVK-----PKIFVFEN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 184
VVG S ++ + + N+ DY+ + IL+ L +GVP R R F + K
Sbjct: 114 VVGL-MSMQKGQLFQQICNAFKERDYILEHAILNALDYGVPQIRERVFLVGALKRF---- 168
Query: 185 QLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTET 244
Q P P I H D+ L P++ +GD +
Sbjct: 169 ----KQKFYFPKP---------IKTHFSLKDA----LGDLPPIQS----GENGDAL---- 203
Query: 245 GFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTK 304
G+L +F + + + L+ + + G + D + P+S R K
Sbjct: 204 GYLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDL-PESLR----PK 258
Query: 305 SYY--RYVKGTGSLLATVQPKNKGKASSLKEQH---LRYFTPREVANLHSFPGDFQFPHH 359
S Y Y K A +N SS + H R + RE A L SFP +++F +
Sbjct: 259 SGYINTYAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKF--Y 316
Query: 360 LSLRQRYALLGNSLSIAVVAPLLQYLFAQA 389
S + +GN+ V PLL AQA
Sbjct: 317 GSASAKRLQIGNA-----VPPLLSVALAQA 341
>gi|282859944|ref|ZP_06269032.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010]
gi|424899947|ref|ZP_18323489.1| DNA-methyltransferase Dcm [Prevotella bivia DSM 20514]
gi|282587347|gb|EFB92564.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010]
gi|388592147|gb|EIM32386.1| DNA-methyltransferase Dcm [Prevotella bivia DSM 20514]
Length = 448
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+ ++ ++GIGG R ++ ++ + V + + + +A Y LN+G P+ Q T A
Sbjct: 114 FTFIDLFAGIGGFRMAMQ--NLGGRCVFSSEWDIQAQKTYFLNYGEVPFGDITQERTKAY 171
Query: 73 LDMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+ H +L PCQ ++ G + + R F + E+I K P F+ENV
Sbjct: 172 IP---DHFDILCAGFPCQAFSLAGKRLGFEETRGTLFFDVAEIIKR--KQPKAFFLENVK 226
Query: 131 GFETSDTHAKMIEILAN------SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 184
G D K I + N + Y+ +L+ FGVP R R + + RK L+ +
Sbjct: 227 GLLIHD-KGKTINTILNVLREDLNYYVPDPEVLNAANFGVPQHRERVYIVGFRKDLNIKA 285
>gi|83285959|ref|XP_729952.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23489206|gb|EAA21517.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 830
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 101 DARAFSFLKILELIPH--TVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILS 158
D R +SF + L+ + P +F+ENV FE S + I + +Y Q ++LS
Sbjct: 396 DKRTYSFFHVCNLLKNMNVNSLPKYIFIENVKNFELSFSFLYFINSIK-DNYNFQTYLLS 454
Query: 159 PLQFGVPYSRPRYFCLAKRK 178
PLQFG+P R R++C+ K+K
Sbjct: 455 PLQFGIPNERLRFYCICKKK 474
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 28 SLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-----------QGNIQNLTAAELDMY 76
++ ++S+Q + + +I + ND Y FG + Q +I NLT D +
Sbjct: 200 NISSQNISSQHINSQNIRSQNNDNYNNQFGDSNFMSDLKNKDYILQTDINNLTFEFFDNF 259
Query: 77 GAHAWLLSPPCQPYTR 92
+ L+S PCQPYTR
Sbjct: 260 KFYILLISNPCQPYTR 275
>gi|420406668|ref|ZP_14905838.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
gi|393023505|gb|EJB24619.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
Length = 351
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 146/384 (38%), Gaps = 51/384 (13%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPYFELIWANDIDKDAILSYQAN--HKKTQTILCDIMQLN 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VVG + ++ Y+ + IL+ L +GVP R R F + K SF+
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVFLVGVLK--SFK-- 169
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
Q P P I H D+ L P++ +GD + G
Sbjct: 170 ----QKFHFPKP---------IKTHFSLKDA----LGDLPPIQS----GENGDAL----G 204
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
+L +F + + + L+ + + G + D + + + +T +
Sbjct: 205 YLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKNLRPKSGYTNT 264
Query: 306 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
Y + + T + + + R + RE A L SFP +++F S ++
Sbjct: 265 YAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSSSAKR- 323
Query: 366 YALLGNSLSIAVVAPLLQYLFAQA 389
+GN+ V PLL A A
Sbjct: 324 -LQIGNA-----VPPLLSAALAHA 341
>gi|387782130|ref|YP_005792843.1| type II m5C methylase [Helicobacter pylori 51]
gi|261837889|gb|ACX97655.1| type II m5C methylase [Helicobacter pylori 51]
Length = 348
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 146/384 (38%), Gaps = 51/384 (13%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI++ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPYFELIWANDIDNDAILSYQAN--HKETQTILCDIMQLD 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VVG + ++ Y+ + IL+ L +GVP R R + K SF+
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGTLK--SFK-- 169
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
Q P P I H D+ L P++ +GD + G
Sbjct: 170 ----QKFHFPKP---------IKAHFSLKDA----LGDLPPIQS----GENGDAL----G 204
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
+L +F + + + L+ + + G + D + + +T +
Sbjct: 205 YLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPESLRPKSGYTNT 264
Query: 306 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
Y + + T + + + R + RE A L SFP +++F + S +
Sbjct: 265 YAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKF--YGSSSAK 322
Query: 366 YALLGNSLSIAVVAPLLQYLFAQA 389
+GN+ V PLL AQA
Sbjct: 323 RLQIGNA-----VPPLLSVALAQA 341
>gi|110643909|ref|YP_671639.1| type II 5-cytosoine methyltransferase [Escherichia coli 536]
gi|110345501|gb|ABG71738.1| putative type II 5-cytosoine methyltransferase [Escherichia coli
536]
Length = 305
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 18 FYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYG 77
+SG GG+ L ++ + ++ A DI + A D Y+ N G G+I N+ ++ D+
Sbjct: 1 MFSGAGGLDLGLKQSGLD--IIWANDIYEDAVDTYKRNIGEHIVLGDIANINSS--DIPN 56
Query: 78 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 137
+ PCQ ++ + ++S D R +L+++ +I K P ENV G + D
Sbjct: 57 CDVVVGGFPCQGFSVANMNRKSEDPRNKLYLEMVRIIRD--KRPAYFIAENVKGILSLDK 114
Query: 138 HAKMIEILANSD---YLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
+ +I ++ + Y + +L+ +GVP +R R L RK L
Sbjct: 115 GLVIQKITSDFESLGYNVKYSLLNCADYGVPQTRMRVIILGVRKDL 160
>gi|167887561|gb|ACA05985.1| tRNA aspartic acid methyltransferase 1 variant 7 [Homo sapiens]
Length = 63
Score = 58.9 bits (141), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH 58
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF H
Sbjct: 2 EPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH 49
>gi|420404923|ref|ZP_14904103.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
gi|393024793|gb|EJB25903.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
Length = 351
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 146/384 (38%), Gaps = 51/384 (13%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIMQLN 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VVG + ++ Y+ + IL+ L +GVP R R F + K SF+
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVFLVGVLK--SFK-- 169
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
Q P P I H D+ L P++ +GD + G
Sbjct: 170 ----QKFHFPKP---------IKTHFSLKDALGDL----PPIQS----GENGDAL----G 204
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
+L +F + + + L+ + + G + D + + + +T +
Sbjct: 205 YLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKNLRPKSGYTNT 264
Query: 306 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
Y + + T + + + R + RE A L SFP +++F S ++
Sbjct: 265 YAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSSSAKR- 323
Query: 366 YALLGNSLSIAVVAPLLQYLFAQA 389
+GN+ V PLL A A
Sbjct: 324 -LQIGNA-----VPPLLSAALAHA 341
>gi|327198092|ref|YP_004306459.1| gp47 [Burkholderia phage KL3]
gi|310657226|gb|ADP02340.1| gp47 [Burkholderia phage KL3]
Length = 422
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 147/399 (36%), Gaps = 82/399 (20%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-HRPYQGNIQNLTAA 71
+R ++ ++GIGG+R + V + ND + Y NFG H P+ G+I A
Sbjct: 70 FRFIDLFAGIGGIRLGFEAH--GGECVFTSEWNDFSKKTYVDNFGDHHPFIGDIVPFAAE 127
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFS---------FLKILELIPHTVKPP 121
+ H LL+ PCQP++ G+ K++S R F + +I K P
Sbjct: 128 SVP---THDVLLAGFPCQPFSIAGVSKKNSLGRPHGFECTTQGTLFFDVARII--AAKRP 182
Query: 122 HMLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
+ENV + + +T A +++ L + + + Q P R R + RK
Sbjct: 183 AAFVLENVKNLLSHDKGNTFAVILQTLRDELQYDVHYKIIDGQHFTPQHRERIVIVGFRK 242
Query: 179 PLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHD--QPDDSWDKLLESCDPVERFLEFSNS 236
F L L + P L +++ K D +P WD ERF +
Sbjct: 243 KTGFSWDDLR---LPADGPRLA----SILHKTDGSEPVLPWDG--------ERFFDHEKR 287
Query: 237 GDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDS 296
Q S T + + + E R G + YPDS
Sbjct: 288 KVQ--------SKYTLTPNLWTYLQAYAEKHRAAGN-------------GFGFGMAYPDS 326
Query: 297 KRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQF 356
T++ GS + Q K K R TPRE A L FP ++
Sbjct: 327 -----VTRTLSARYHKDGSEILVYQGKGK---------RPRRLTPRECARLMGFPDTYRI 372
Query: 357 PHHLSLRQRYALLGNSLSIAV-------VAPLLQYLFAQ 388
P +S Q Y GNS+ + V + P +Q L A+
Sbjct: 373 P--VSDTQAYRQFGNSVVMPVMKEVARIMTPHIQTLVAE 409
>gi|433639960|ref|YP_007285720.1| site-specific DNA methylase [Halovivax ruber XH-70]
gi|433291764|gb|AGB17587.1| site-specific DNA methylase [Halovivax ruber XH-70]
Length = 371
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 19/183 (10%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
++ + G GG+ Y L KA +S VV D + YE N + +IQ L
Sbjct: 5 AVDLFCGAGGLSYGLQKAGIS--VVAGIDHDPDCKYPYEQNIDGDFVRADIQALAQDPEP 62
Query: 75 MYGAHAW-------LLSPPCQPYTRQGLQKQSS--DARAFSFLKILELIPHTVKPPHMLF 125
+ + W PCQPY+ G K+S D + + L + I V P ++
Sbjct: 63 IAQMYPWDTDLKVLAACAPCQPYSTMGHSKESGHEDHQKWGLLNEVSRIAEYVD-PDVVV 121
Query: 126 VENVVGFETSD-THAKMIEILANSDYLT----QEFILSPLQFGVPYSRPRYFCLA-KRKP 179
ENV+ + D + IE L + DY + + P ++G+P +R R+ +A KR P
Sbjct: 122 TENVLQVKQEDGVYDAFIESLESQDYHINSDENKNVYCP-EYGIPQNRKRWVVMASKRGP 180
Query: 180 LSF 182
LS
Sbjct: 181 LSL 183
>gi|386586337|ref|YP_006082739.1| modification methylase HaeIII [Streptococcus suis D12]
gi|353738483|gb|AER19491.1| modification methylase HaeIII [Streptococcus suis D12]
gi|451939649|gb|AGF89780.1| C-5 cytosine-specific DNA methylase [Streptococcus phage phiD12]
Length = 355
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 23/185 (12%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
+++ +SG+GG+ +A S V FD + Y + H + + ++T+ EL+
Sbjct: 5 IIDLFSGVGGLSLGFEQAGFSTIVANEFD----KSIAYSYSKNHPFTKMIVGDITSLELE 60
Query: 75 ----MYGAHAWLL--SPPCQPYTRQGLQKQSSDARAF---SFLKILELIPHTVKPPHMLF 125
Y ++ PPCQ Y+++G +K D R F F+K++EL+ P+
Sbjct: 61 KEFLQYKNKVDVVVGGPPCQGYSQKGSRKTIHDERNFLFKYFVKVVELV-----SPNYFV 115
Query: 126 VENVVGFETSDT---HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPL 180
+ENV T++ ++I + Y I+ +FGVP R R L K +K +
Sbjct: 116 MENVPNLLTAEKGFFKQELITLFEELGYSLSMEIVDASKFGVPQRRRRAIILGKKGKKSV 175
Query: 181 SFRCQ 185
+FR +
Sbjct: 176 TFRLE 180
>gi|419419078|ref|ZP_13959345.1| M.HpyAVIII, a type II cytosine specific DNA methyltransferase
[Helicobacter pylori NCTC 11637 = CCUG 17874]
gi|384373035|gb|EIE28580.1| M.HpyAVIII, a type II cytosine specific DNA methyltransferase
[Helicobacter pylori NCTC 11637 = CCUG 17874]
Length = 313
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 15/172 (8%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++F SGIGG R L + + + V +IND+A YEL F G++ + +L
Sbjct: 1 MDFCSGIGGGRLGLERCRL--KCVGHAEINDEALRTYELFFKDTHNFGDLMRINPNDLPD 58
Query: 76 YGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGF 132
+ A + PCQ ++ G +K D R + ++IL+ VK P +ENV G
Sbjct: 59 FD--ALISGFPCQAFSINGKRKGLEDERGTIIYGLIRILK-----VKQPECFLLENVKGL 111
Query: 133 ---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ +T +I+ L + Y T IL+ F + R R + + RK L
Sbjct: 112 INHKQQETFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLK 163
>gi|116627564|ref|YP_820183.1| site-specific DNA methylase [Streptococcus thermophilus LMD-9]
gi|116100841|gb|ABJ65987.1| Site-specific DNA methylase [Streptococcus thermophilus LMD-9]
Length = 406
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
+L +SG GGM A + ++ A D A + Y+ N G+ G+I + ++E+
Sbjct: 6 LLSLFSGAGGMDLGFKNAGFN--ILWANDFQKDAVETYKNNIGNHIVLGDITKIDSSEIP 63
Query: 75 MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET 134
+ PCQ ++ +++ D R F +L++L +I K P ENV G
Sbjct: 64 GTDIDVVIGGFPCQGFSIANVKRNMEDHRNFLYLELLRVIKD--KQPKFFVAENVKGL-L 120
Query: 135 SDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
S K+I ++ Y +L+ ++GVP +R R + R
Sbjct: 121 SMQKGKVINMIVKDFESLGYKVDYQLLNAAEYGVPQARERVIIIGNR 167
>gi|119355930|ref|YP_910574.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM
266]
gi|119353279|gb|ABL64150.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM
266]
Length = 371
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 143/381 (37%), Gaps = 57/381 (14%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGN-IQNLTAAE 72
RV +F+SG GG +A + Q A D A Y+ NF P + I+ L
Sbjct: 13 RVYDFFSGCGGTSVGFGRAGI--QHALAVDSCSDAISTYQKNFIGVPVITDPIETLNVDR 70
Query: 73 LDMYGAHA-----WLLSPPCQPYTRQGLQKQ---SSDARAFSFLKILELIPHTVKPPHML 124
+ Y +H + PCQP+T+Q + +SD R + +++ + P ++
Sbjct: 71 IQNYFSHNPEVKLFCGCAPCQPFTKQKTNTKKDAASDDRRGLLIYFSDIVHACL--PELV 128
Query: 125 FVENVVGF-----ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKP 179
FVENV G E A I L +DY +++ +G P R R+ +A R
Sbjct: 129 FVENVPGLQKFSLEDGGPLAMFISRLKQNDYFVDFDVIAAQDYGSPQVRRRFVLIASR-- 186
Query: 180 LSFRCQLLNNQLLRSPSPLLG-NDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGD 238
L L P+P G N + +T HD + + V+ E ++ +
Sbjct: 187 -------LGKITL--PAPTHGPNTKNSYVTVHDA--------IGNLPSVKHGTEHPDNQN 229
Query: 239 QVNTETGFLST-GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSK 297
N LS + GA +R L+P ++ D K
Sbjct: 230 YPNHRAAMLSALNLERIRHTGANGRRDWPER-------LLPKCYAQK---------KDGK 273
Query: 298 RCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFP 357
R + Y R G + T + + + R T RE A L FP DF F
Sbjct: 274 RYEGHSDCYTRLAWGEPAPGLTTRCISYSNGRFGHPEQDRAITIREAAKLQGFPDDFIFT 333
Query: 358 HHLSLRQRYALLGNSLSIAVV 378
L+ R +GN++ ++V
Sbjct: 334 GSLNSMARQ--IGNAVPVSVA 352
>gi|420402021|ref|ZP_14901212.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6081]
gi|393017840|gb|EJB18992.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6081]
Length = 188
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPYFELIWANDIDKDAILSYQAN--HKKTQTILCDIMQLN 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R F + K
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVFLVGVLK 166
>gi|385262628|ref|ZP_10040731.1| modification methylase HhaI family protein [Streptococcus sp.
SK643]
gi|385189941|gb|EIF37392.1| modification methylase HhaI family protein [Streptococcus sp.
SK643]
Length = 406
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60
M + N E + + F+SG+GG+ + + +VV A + + A Y+LN
Sbjct: 1 MTNSVSSNRPEKYNIAAFFSGVGGIELGFEQTN-EFRVVYANEFDKYARQTYQLNHPDTY 59
Query: 61 YQG-NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
G +I ++ ++ + PCQ ++ G +K D R F ++L +I +
Sbjct: 60 LDGRDIHDVQPEDIPAERVDVIMGGFPCQAFSIAGYRKGFDDDRGDLFFELLRMIEG--R 117
Query: 120 PPHMLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
P +F+ENV VG + +T + E L ++Y + +L+ +G +P +R R + +
Sbjct: 118 KPRAIFIENVKNMVGHDHGNTFKVIREALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|422110390|ref|ZP_16380413.1| putative DNA cytosine methyltransferase [Neisseria lactamica
Y92-1009]
gi|309378773|emb|CBX22599.1| putative DNA cytosine methyltransferase [Neisseria lactamica
Y92-1009]
Length = 342
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 10/167 (5%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++ ++GIGG R ++ ++ + V + + ++KA YE NFG P+ G+I +
Sbjct: 19 IDLFAGIGGFRIAMQ--NLGGECVFSSEWDEKAKQTYEANFGEVPF-GDITLEETKQCIP 75
Query: 76 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 135
PCQ ++ G + D R F + E+I P F+ENV G
Sbjct: 76 EQFDVLCAGFPCQAFSIAGRRGGFEDTRGTLFFDVAEIIRR--HRPKAFFLENVKGLTNH 133
Query: 136 DTHAKMIEILAN-----SDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
D + IL ++ + I++ FGVP +R R F + R
Sbjct: 134 DRGRTLQTILNTLREDLGYFVPEPEIVNAKDFGVPQNRERIFIVGFR 180
>gi|31874014|emb|CAD97925.1| hypothetical protein [Homo sapiens]
gi|167887557|gb|ACA05981.1| tRNA aspartic acid methyltransferase 1 variant 8 [Homo sapiens]
Length = 69
Score = 58.5 bits (140), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH 58
E RVLE YSG+GGM ++L ++ + AQVV A D+N AN+VY+ NF H
Sbjct: 2 EPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH 49
>gi|421863621|ref|ZP_16295316.1| putative DNA cytosine methyltransferase [Neisseria lactamica
Y92-1009]
gi|309378924|emb|CBX22511.1| putative DNA cytosine methyltransferase [Neisseria lactamica
Y92-1009]
Length = 330
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA-- 71
+ ++ ++G GG+ +A +V AF+ DKA D+Y NF H Y+ ++ + A
Sbjct: 2 KCIDLFAGCGGLSLGFEQAGF--EVCAAFEKWDKAIDIYRKNFNHPVYETDLTDEQTAIS 59
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVEN 128
++ Y + PPCQ ++ G ++ + RA + F I+ P +EN
Sbjct: 60 QISNYQPDLIMGGPPCQDFSSAG-KRDVTLGRADLTYHFANIV-----CSAHPTWFVMEN 113
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK-RKPLSFRCQLL 187
V + S +I+ +DY IL GVP +R R+F + K + +F L
Sbjct: 114 VEQIKKSHILHDVIKQFMQADYGLTSVILDASYCGVPQARTRFFLIGKLGEEHNFLTPTL 173
Query: 188 NNQLLRSPSPL---LGN 201
++L P + LGN
Sbjct: 174 TDRLAEKPMTVRDYLGN 190
>gi|80159730|ref|YP_398474.1| putative DNA methylase [Clostridium phage c-st]
gi|416355462|ref|ZP_11681841.1| prophage LambdaSa04, methyltransferase C-5 [Clostridium botulinum C
str. Stockholm]
gi|78675320|dbj|BAE47742.1| putative DNA methylase [Clostridium phage c-st]
gi|338195202|gb|EGO87516.1| prophage LambdaSa04, methyltransferase C-5 [Clostridium botulinum C
str. Stockholm]
Length = 370
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 19/174 (10%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG--NIQNLTAA 71
+ ++F+SG G R + D + + +I +A + YE N+ ++ L A
Sbjct: 2 KFIDFFSGAGMFRKGM--EDAGHECIGYVEIQKQARETYETNYDTTKEWTFHDVAQLKAE 59
Query: 72 ELDMYGAHAWLLSPPCQPY------TRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
D+ A W PC+ TR GL+ + S FL + +L+ + P +LF
Sbjct: 60 --DIPNADIWCFGFPCKNMSTANVTTRTGLKGEQSGL----FLIMCDLLNKMKRKPQILF 113
Query: 126 VENVVGFETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAK 176
+ENV GF T + + +E L L + I S +Q+ VP +R R + + K
Sbjct: 114 IENVQGFSTINGGSDFLEALVRLHKLGYDIKYEISSAMQYDVPQNRIRTYLICK 167
>gi|348590059|ref|YP_004874521.1| DNA-cytosine methyltransferase [Taylorella asinigenitalis MCE3]
gi|347973963|gb|AEP36498.1| DNA-cytosine methyltransferase [Taylorella asinigenitalis MCE3]
Length = 325
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++ +SGIGG R +L + A+ + + D + A + Y +NF P+ ++T ++
Sbjct: 15 IDLFSGIGGFRVALQ--SLGAKCLFSSDWDRYAKETYWINFKELPH----DDITKIDIKF 68
Query: 76 YGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET 134
H L + PCQ ++ G + D+R F ++ + + P ++F+ENV F
Sbjct: 69 IPEHDILCAGFPCQAFSISGKRLGFEDSRGTLFFDVVRIAES--RRPKVIFLENVRNFAK 126
Query: 135 SDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
D+ + + ++ S Y +L+ +G+P SR R F +A R+ L
Sbjct: 127 HDS-GRTLRVVKQSLLRLGYSFDWKVLNSSDYGIPQSRARIFMVAFREDL 175
>gi|322510825|gb|ADX06139.1| putative C-5 cytosine-specific DNA methyltransferase [Organic Lake
phycodnavirus 1]
Length = 390
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 20/183 (10%)
Query: 7 KNDGEAWRVLEFYSGIGGM-----RYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY 61
+N + + ++ + G+G R ++++ +V V A DIN+ +YE N+G +P
Sbjct: 73 ENQRKEVKYIDLFCGLGAFHTAFNRNNILQNEVKYTCVLASDINECVRKIYEENYGIKP- 131
Query: 62 QGNIQNL---TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSD-ARAFSFLKILELIPHT 117
+G+I + T + D+ A PCQP++ G QK D R F KILE+I
Sbjct: 132 EGDINKINIDTMPDFDILCA-----GFPCQPFSIAGNQKGFQDKTRGNLFYKILEIIDR- 185
Query: 118 VKPPHMLFVENVVGFET---SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 174
K P L +ENV T +T + L Y ++ + P SR R + +
Sbjct: 186 -KQPETLMLENVKNLHTIHKGETFKIIKNELETRGYNLSYKVIDSRYYNSPQSRQRIYII 244
Query: 175 AKR 177
+
Sbjct: 245 CNK 247
>gi|418088332|ref|ZP_12725497.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae GA47033]
gi|418201844|ref|ZP_12838275.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae GA52306]
gi|419454963|ref|ZP_13994924.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae EU-NP04]
gi|421285192|ref|ZP_15735969.1| cytosine-specific methyltransferase [Streptococcus pneumoniae
GA60190]
gi|421306757|ref|ZP_15757403.1| cytosine-specific methyltransferase [Streptococcus pneumoniae
GA60132]
gi|353756009|gb|EHD36612.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae GA47033]
gi|353868526|gb|EHE48412.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae GA52306]
gi|379630031|gb|EHZ94622.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae EU-NP04]
gi|395887171|gb|EJG98186.1| cytosine-specific methyltransferase [Streptococcus pneumoniae
GA60190]
gi|395908720|gb|EJH19597.1| cytosine-specific methyltransferase [Streptococcus pneumoniae
GA60132]
Length = 406
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60
M + N E + + F+SG+GG+ + + +VV A + + A Y+LN
Sbjct: 1 MTNSVSSNRPEKYNIAAFFSGVGGIELGFEQTN-EFRVVYANEFDKYARQTYQLNHPDTY 59
Query: 61 YQG-NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
G +I ++ ++ + PCQ ++ G +K D R F ++L +I +
Sbjct: 60 LDGRDIHDVQPEDIPAERVDVIMGGFPCQAFSIAGYRKGFDDDRGDLFFELLRMIEG--R 117
Query: 120 PPHMLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
P +F+ENV VG + +T + E L ++Y + +L+ +G +P +R R + +
Sbjct: 118 KPRAIFIENVKNMVGHDHGNTFKVIREALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|429105820|ref|ZP_19167689.1| Unknown, probable DNA-methyltransferase [Cronobacter malonaticus
681]
gi|426292543|emb|CCJ93802.1| Unknown, probable DNA-methyltransferase [Cronobacter malonaticus
681]
Length = 379
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 16/182 (8%)
Query: 7 KNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-HRPYQGNI 65
+ D E W LEF++GIG R + +A + +D+N K+ +YE ++ H+ + +I
Sbjct: 7 RGDAE-WTALEFFAGIGLARAGMEQAGIKTVWSNDYDLNKKS--MYEGHWKTHKLFLADI 63
Query: 66 QNLTAAELDMYGAHAWLLSPPCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPP 121
L + +L AW S PC + R GL+ + F F +L + + P
Sbjct: 64 HTLNSEDLPTADV-AW-ASSPCTDLSLAGKRVGLRGGRESSAFFGFTDLLAGMNE--RKP 119
Query: 122 HMLFVENVVGFETSDTHAKM---IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
++ +ENV G +S + ++ Y L +F VP SRPR F + +
Sbjct: 120 EVIVLENVTGLASSHNREDLRAAVKEFNELGYAVDAITLDARRF-VPQSRPRLFLIGAKN 178
Query: 179 PL 180
P+
Sbjct: 179 PI 180
>gi|420419623|ref|ZP_14918711.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
gi|393038989|gb|EJB40021.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
Length = 318
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 15/177 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
E ++F SGIGG R L + + + V +IND+A YEL F G++ +
Sbjct: 2 EILTFMDFCSGIGGGRLGLERCHL--KCVGHAEINDEALRTYELFFKDTYNFGDLMRINP 59
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVE 127
+L + A + PCQ ++ G +K D R + ++IL+ VK P +E
Sbjct: 60 NDLPDFD--ALISGFPCQAFSINGKRKGLEDERGTIIYGLIRILK-----VKQPKCFLLE 112
Query: 128 NVVGFETSDTHAK---MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
NV G + A +I+ L + Y T IL+ F + +R R + + RK L
Sbjct: 113 NVKGLINHNKKATFNIIIKALQEAGYTTYYKILNSADFQLAQNRERLYIVGFRKDLK 169
>gi|386748677|ref|YP_006221885.1| type II DNA modification (methyltransferase) [Helicobacter cetorum
MIT 99-5656]
gi|384554919|gb|AFI06675.1| type II DNA modification (methyltransferase) [Helicobacter cetorum
MIT 99-5656]
Length = 349
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 25/175 (14%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG--------N 64
+RV + + G GG+ Y + +++ A DI+ A Y+ N H+ Q N
Sbjct: 3 FRVADIFCGAGGLSYGF-STHPNFELIWANDIDKDAILSYQAN--HKNTQTILCDITQLN 59
Query: 65 IQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHM 123
QNL ++D+ L PPCQ Y+ G ++ A F +L++L+L+ P +
Sbjct: 60 CQNLPRTQIDIL-----LGGPPCQSYSTLGKRQMDEKANLFKEYLRVLDLV-----KPKI 109
Query: 124 LFVENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
ENVVG + K+ + Y+ + IL+ L +GVP R R +
Sbjct: 110 FIFENVVGLMSMQKGQLFKKICSAFKDRGYILEYTILNALDYGVPQIRERVILVG 164
>gi|427730822|ref|YP_007077059.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
gi|427366741|gb|AFY49462.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
Length = 455
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++ ++GIGG R +L K + Q + +I+ +A VY+ NF Q I+ ++
Sbjct: 28 VDLFAGIGGFRIALEK--LGGQCLGYSEIDKQAIQVYKQNFISYLNQDEIELGDITKIPE 85
Query: 76 YGAHAWLL--SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
A+ ++ PCQP++ G + D R + ++ L+ + +P +F ENV G
Sbjct: 86 LPANIDIVVGGVPCQPWSVAGCLRGFDDPRGKLWFDVIRLVNQS-QPKSFIF-ENVSGLA 143
Query: 134 TSDTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 188
+ + I L N Y + IL+ FG+P +R R F + RK + +CQ N
Sbjct: 144 SPKNRENLELILHELENIGYCVKWKILNAYDFGLPQNRDRVFIVGIRKDIE-KCQEYN 200
>gi|322392562|ref|ZP_08066022.1| DNA methylase [Streptococcus peroris ATCC 700780]
gi|321144554|gb|EFX39955.1| DNA methylase [Streptococcus peroris ATCC 700780]
Length = 406
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60
M + N E + + F+SG+GG+ + + +VV A + + A Y+LN
Sbjct: 1 MTNSVSSNRPEKYNIAAFFSGVGGIELGFEQTN-EFRVVYANEFDKYARQTYQLNHPDTY 59
Query: 61 YQG-NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
G +I ++ ++ + PCQ ++ G +K D R F ++L +I +
Sbjct: 60 LDGRDIHDVQPEDIPAERVDVIMGGFPCQAFSIAGYRKGFDDDRGDLFFELLRMIEG--R 117
Query: 120 PPHMLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
P +F+ENV VG + +T + E L ++Y + +L+ +G +P +R R + +
Sbjct: 118 KPRAIFIENVKNMVGHDHGNTFKVIREALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|336402811|ref|ZP_08583538.1| hypothetical protein HMPREF0127_00851 [Bacteroides sp. 1_1_30]
gi|335947692|gb|EGN09476.1| hypothetical protein HMPREF0127_00851 [Bacteroides sp. 1_1_30]
Length = 355
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 14/172 (8%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
V++ + GIGG+ + + K ++ FDI+D YE N + Y +I+ +T +++
Sbjct: 9 VIDLFCGIGGLSHGMFKEGFD--IIAGFDIDDTCKYAYENNNKSKFYNQDIKTVTIEQIN 66
Query: 75 ----MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFL----KILE-LIPHTVKPPHMLF 125
Y PCQP++ + + D + L +I+E ++P V M
Sbjct: 67 NLFANYDIKVLAGCAPCQPFSSYAFKVKDKDKNKYDLLYEFGRIVEGVLPDIVT---MEN 123
Query: 126 VENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
V ++ F+ +++L + Y I+ +G+P +R R LA R
Sbjct: 124 VSQILSFKQKPVLNDFVDLLKKNQYQVDYKIVYCPDYGIPQTRKRIVLLASR 175
>gi|157827820|ref|YP_001496884.1| site-specific DNA methylase [Rickettsia bellii OSU 85-389]
gi|157803124|gb|ABV79847.1| Site-specific DNA methylase [Rickettsia bellii OSU 85-389]
Length = 165
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 13/171 (7%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ + GIGG R +L ++ + V + DI+ + Y+ NFG +P+ G+I + A +
Sbjct: 2 YKFIDLFCGIGGFRKALESKNL--ECVFSSDIDKDVQEAYKRNFGDKPH-GDITEIPANK 58
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
+ H L + PCQ ++ G + D F +I+ + + P++L +ENV
Sbjct: 59 IP---KHDILCAGFPCQSFSISGKRGGIEDNNGKLFYEIIRIAQY--HKPYILLLENVKN 113
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPR-YFCLAKRK 178
+ + + + + L Y IL+ FGVP +R R FCL ++
Sbjct: 114 ILNIDNGNVIKTIDQKLEEIGYKVYRHILNASLFGVPQARERSLFCLLTKR 164
>gi|385860126|ref|YP_005906636.1| cytosine-specific methyltransferase [Mycoplasma haemofelis Ohio2]
gi|334193827|gb|AEG73555.1| Cytosine-specific methyltransferase [Mycoplasma haemofelis Ohio2]
Length = 378
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQN 67
N+ +++++ ++GIGG R K VV + +I+ + Y+ NFG P G+I
Sbjct: 66 NEKAPYKMIDLFAGIGGTRLGFYKTG-KVNVVFSSEIDKFSIKTYKANFGETP-SGDITK 123
Query: 68 LTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
+ + ++ H L+ PCQ +++ G + D R F +I ++ K P +
Sbjct: 124 IGSEDIP---DHDILVGGFPCQSFSQAGKKLGFKDTRGTLFFEIERVLRD--KRPKAFLL 178
Query: 127 ENVVGFET---SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
ENV ++ +T+ + L N +Y +L FGVP +R R + +
Sbjct: 179 ENVKNLKSHKGGETYEVIERALRNLNYEVYSTVLRARDFGVPQNRERIYIVG 230
>gi|70734372|ref|YP_260119.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas protegens Pf-5]
gi|68348671|gb|AAY96277.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas protegens Pf-5]
Length = 394
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 18/186 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAAE 72
R EF++G G R L Q + A D++ Y N+G + +I+ + + +
Sbjct: 6 RFFEFFAGGGMARAGLGN---QWQCLFANDMDRIKASTYIQNWGKDHFDSRDIREVNSED 62
Query: 73 LDMYGAHAWLLSPPCQPYT--RQGLQKQSSDARAFS-------FLKILELIPHTVKPPHM 123
L+ G AW S PCQ + GL SS A+ F+ FL +++ + + P +
Sbjct: 63 LERNGDLAWA-SFPCQDLSVAGNGLGIGSSSAKDFTRSGALWPFLDLIDTLRQEERQPPL 121
Query: 124 LFVENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
L +ENVVG E A + E L Y I+ F +P SRPR F +A ++ +
Sbjct: 122 LVLENVVGLLTLEGGRDFAAICERLGEIGYRYGAVIIDAKHF-LPQSRPRVFIIAVQRNI 180
Query: 181 SFRCQL 186
C+L
Sbjct: 181 DIPCKL 186
>gi|323650438|gb|ADX97294.1| M.Cac8I [Clostridium acetobutylicum]
Length = 398
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 148/394 (37%), Gaps = 71/394 (18%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG----HRPYQGNIQNLT 69
RV+ F+SG GGM A ++V + D + A Y N G H G+I L
Sbjct: 27 RVISFFSGAGGMDLGFTLA--GHEIVWSNDFDKDAVQTYNENIGKYWKHESVLGDITKLL 84
Query: 70 AA---ELD--MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
+ E+D + + PCQ ++ + + D + + +L++L++I VK P
Sbjct: 85 SKPFEEIDKIIPDGDVVIGGFPCQGFSIANVNRSMEDEKNYLYLELLKVI--HVKNPKFF 142
Query: 125 FVENVVGFETSDTHAKMIEIL------ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
+ENV G E + + IL Y +L+ FGVP +R R + R
Sbjct: 143 VLENVKGLENMEKGEVLNVILDDLEKAGKCGYTVCYDVLNAYNFGVPQNRERVIIVGIRN 202
Query: 179 PLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEF----- 233
L R + P + N T+ K S KL E P ++
Sbjct: 203 DLRDR-------YIIPQKPAVKNKRKTLFVKPTHSKTS--KLGEELKPWQKINYLYNLWT 253
Query: 234 -----SNSGDQVNT--ETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHF--LVPLSLIER 284
SN VN ET L+T A+ D E D ++H L +S+ R
Sbjct: 254 NGKLDSNKNYLVNENDETYKLATLRDAISDLPLE---FEADNKDILNHTGSLCKVSISNR 310
Query: 285 WGSAMDIVYPDSKRCCCFTK---SYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTP 341
G+ R + K + GTG L P QH R +
Sbjct: 311 VGN----------RATSWDKYAPTIMGRGSGTGGPLIIPHPL----------QH-RRLSV 349
Query: 342 REVANLHSFPGDFQFPHHLSLRQRYALLGNSLSI 375
REVA + +FP F F + S Y +GN++ +
Sbjct: 350 REVARIQTFPDKFLFKGNNS--ACYRQIGNAVPV 381
>gi|384894068|ref|YP_005768117.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Sat464]
gi|308063322|gb|ADO05209.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Sat464]
Length = 348
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 146/384 (38%), Gaps = 51/384 (13%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y++N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPYFELIWANDIDKDAILSYQVN--HKEVQTILCDIMQLN 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VVG + ++ Y+ + IL+ L +GVP R R + K SF+
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYVLEHAILNALDYGVPQIRERVILVGVLK--SFK-- 169
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
Q P P I H D+ L P++ +GD + G
Sbjct: 170 ----QKFHFPKP---------IKTHFSLKDALGDL----PPIQS----GENGDAL----G 204
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
+L +F + + + L+ + + G + D + + + +T +
Sbjct: 205 YLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKNLRPKSGYTNT 264
Query: 306 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
Y + + T + + + R + RE A L SFP +++F S ++
Sbjct: 265 YAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSVREGARLQSFPDNYKFCGSTSAKRL 324
Query: 366 YALLGNSLSIAVVAPLLQYLFAQA 389
+GN+ V PLL A A
Sbjct: 325 Q--IGNA-----VPPLLSVALAHA 341
>gi|296170222|ref|ZP_06851815.1| DNA (cytosine-5-)-methyltransferase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895098|gb|EFG74816.1| DNA (cytosine-5-)-methyltransferase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 388
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 15/176 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG----HRPYQGNIQNLT 69
+ +EF++GIG R L KA QV A D +Y FG H G+I +
Sbjct: 13 KAIEFFAGIGLARMGLEKAGF--QVTWANDYEPDKRAMYVGQFGESEGHTFALGDIGKVK 70
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFV 126
AA+L A AW S PC + G + + + + + F K+L+ + +PP ++ +
Sbjct: 71 AADLPTDAALAW-ASSPCTDLSLAGGRAGFAGSESGVFWDFTKLLDGMGEDNRPP-VIVL 128
Query: 127 ENVVGFETSDTHAKMIEILANSD---YLTQEFILSPLQFGVPYSRPRYFCLAKRKP 179
ENV G TS + +A + Y L +F VP SRPR F + + P
Sbjct: 129 ENVTGLATSHGGDDLTAAIAEFNRLGYSVDVLALDARRF-VPQSRPRLFVVGAQNP 183
>gi|254410261|ref|ZP_05024041.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
gi|196183297|gb|EDX78281.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
Length = 384
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL-- 68
E + ++ ++GIGG R + + + V + +I+ K +VY NF +P G+I+ +
Sbjct: 2 EKIKFIDLFAGIGGFRIAFEQT--GYKCVYSCEIDPKCQEVYFNNFLDKP-AGDIREIDI 58
Query: 69 -TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+ + D+ A PCQP++ G +K D R F +I E+I K P ++ +E
Sbjct: 59 NSIPDFDVLTA-----GFPCQPFSICGKRKGFQDTRGTLFFRICEII--AAKKPPVILLE 111
Query: 128 NVVGFETSDTHAKMIEILANSD---YLTQEFILSPLQFGVPYSRPRYFCLA-KRKPLSF 182
NV D + IL + + Y +L+ FGVP +R R +A K K +F
Sbjct: 112 NVKHLMHQDKGRTLKVILYSLEDLGYNVNYSLLNSKDFGVPQNRERIIIVATKNKQFNF 170
>gi|418166192|ref|ZP_12802848.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae GA17971]
gi|353829788|gb|EHE09918.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae GA17971]
Length = 406
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60
M + N E + + F+SG+GG+ + + +VV A + + A Y+LN
Sbjct: 1 MTNSVSSNRSEKYNIAAFFSGVGGIELGFEQTN-EFRVVYANEFDKYARQTYQLNHPETY 59
Query: 61 YQG-NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
G +I + ++ + PCQ ++ G +K D R F ++L +I
Sbjct: 60 LDGRDIHAVQPEDIPAERVDVIMGGFPCQAFSIAGYRKGFDDDRGDLFFELLRMIEGC-- 117
Query: 120 PPHMLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
P +F+ENV VG + +T + E L ++Y + +L+ +G +P +R R + +
Sbjct: 118 KPRAIFIENVKNMVGHDQGNTFKVIREALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|301020988|ref|ZP_07185039.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1]
gi|3660493|emb|CAA57706.1| M.EcoHK31I alpha polypeptide [Escherichia coli]
gi|300398362|gb|EFJ81900.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1]
Length = 309
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 75/176 (42%), Gaps = 11/176 (6%)
Query: 5 MCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
M K + ++V F++GIGG L KA + +VV +IN V N+ P +
Sbjct: 1 MKKKPLKQYKVSSFFAGIGGFDLGLEKAGM--EVVFQCEINKFCQKVLRKNWSKVPLHTD 58
Query: 65 IQNLTAAELDMYGAHAWLLSPPCQPYT--RQGLQKQSSDARAFSFLKILELIPHTVKPPH 122
I L A E+ ++ W PCQ + QG +K AR+ F +LI + P
Sbjct: 59 ITRLNADEIPE--SNVWCGGFPCQDVSSANQGKRKGLEGARSGLFYTYAKLIEE--RKPE 114
Query: 123 MLFVENVVGFETSDTHAK---MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
L +ENV G S +I+ L Y +L FG P R R + +A
Sbjct: 115 WLIIENVPGLLNSHNGQDFKVVIDTLVEFGYGVSWRVLDAKYFGTPQRRRRVYIVA 170
>gi|169786848|ref|YP_001700742.1| modification methylase (Cytosine-specific
methyltransferase)(HpaIIM-like) [Acinetobacter
baumannii]
gi|169150765|emb|CAP02959.1| modification methylase (Cytosine-specific
methyltransferase)(HpaIIM-like) [Acinetobacter
baumannii]
Length = 366
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 10/171 (5%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ ++GIGG R + ++ + V + +I+ A Y NFG PY G+I + +
Sbjct: 42 FKFIDLFAGIGGFRLAFQ--NLGGRCVFSSEIDLAAQKTYTANFGDTPY-GDITLESTKD 98
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
PCQ ++ G + D R F + ++I K P F+ENV G
Sbjct: 99 AIPDNFDILCGGFPCQAFSIAGKRSGFEDTRGTLFFDVADIIKR--KQPKAFFLENVKGL 156
Query: 133 ETSDTHAKMIEILA--NSD---YLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
+ D + IL D Y+ + I++ FGVP +R R F + K
Sbjct: 157 VSHDKGKTLRTILQVLREDLGYYVPEPKIINAKDFGVPQNRERIFIVGFHK 207
>gi|303328045|ref|ZP_07358484.1| modification methylase MspI [Desulfovibrio sp. 3_1_syn3]
gi|302861871|gb|EFL84806.1| modification methylase MspI [Desulfovibrio sp. 3_1_syn3]
Length = 417
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++ ++G+GG L +A Q V A +I+ +YE NFG RP + ++ +++
Sbjct: 10 IDLFAGLGGFHLGLSRAGY--QCVFASEIDGDLASLYERNFGLRP----VGDIRKVDVNH 63
Query: 76 YGAHAWLLSP-PCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV- 129
H L + PCQP++ +QG + S L+I+E P + +ENV
Sbjct: 64 VPKHDVLCAGFPCQPFSSAGKKQGAKCPKSGRLINEVLRIVEF-----HHPEYILLENVP 118
Query: 130 --VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA-KRKPLSF 182
+ + + + LA Y I SP QFG+P +R R F +A KR + F
Sbjct: 119 QIITIQNGEFWKHVNSSLARLGYHVTYKIYSPKQFGIPQNRERVFVVASKRHAIEF 174
>gi|381179820|ref|ZP_09888667.1| DNA-cytosine methyltransferase [Treponema saccharophilum DSM 2985]
gi|380768298|gb|EIC02290.1| DNA-cytosine methyltransferase [Treponema saccharophilum DSM 2985]
Length = 361
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 141/391 (36%), Gaps = 58/391 (14%)
Query: 16 LEFYSGIGGMR--YSLMKAD--VSAQVVEAFDINDKANDVYELNFGH--RPYQGNIQNLT 69
+E +SGIGG R +L++ D + V +I A Y+ N+ G+I
Sbjct: 4 VELFSGIGGFRQALNLIQKDFNIPFNCVAFSEIEKNAVATYKANYDTTGEIEMGDIVAFN 63
Query: 70 AAELDMYGAHAWLLSP--PCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHML 124
+ E ++ H LL+ PCQP++ G Q SD R F KIL++ + +
Sbjct: 64 SNEDNIRNLHFDLLTGGFPCQPFSMMGEQLGFSDTRGTMFFEIEKILKIKKEQGEQIPFV 123
Query: 125 FVENVVGFETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRY--FCLAKRKP 179
+ENV T D I A+ + L F I + F + R R F K P
Sbjct: 124 VLENVRNLYTHDKGNTFKTIKAHLENLGYHFFSSIFNTENFALAQKRNRIIIFATTKNIP 183
Query: 180 LSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQ 239
F N + + D+M I K D +LE P + FL
Sbjct: 184 NGFDFSAENIKQVFDAHI----DEMKSIYKQQTTLD----VLEKEVPAKYFL-------S 228
Query: 240 VNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRC 299
+ LS GTA C ++ R
Sbjct: 229 EKIKPTILSNGTAGFKSNSKINLLTARPLCATMHKM---------------------HRA 267
Query: 300 CCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDF-QFPH 358
C ++ + Q K + ++ H+R TP E NL FP +F + PH
Sbjct: 268 CQDNYFSQEFISSENPIAYLKQKYTKEEEAT---HHIRKLTPEEAFNLQGFPKEFCKKPH 324
Query: 359 HLSLRQR--YALLGNSLSIAVVAPLLQYLFA 387
L + Y GN++S+ V+ ++ YLF
Sbjct: 325 ELKMSDGALYKQAGNAVSVNVIYAIMYYLFV 355
>gi|384895833|ref|YP_005769822.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
gi|315586449|gb|ADU40830.1| possible DNA (cytosine-5-)-methyltransferase [Helicobacter pylori
35A]
Length = 351
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 147/384 (38%), Gaps = 50/384 (13%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N HR Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPHFELIWANDIDKDAILSYQAN--HRKTQTILCDIMQLN 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNFPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VVG + ++ Y+ + IL+ L +GVP R R + K SF+
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGVLK--SFK-- 169
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
Q P P I H D+ L P++ +GD + G
Sbjct: 170 ----QKFHFPKP---------IKTHFSLKDALGDL----PPIQS----GENGDAL----G 204
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
+L +F + + + L+ + + G + D + + + +T +
Sbjct: 205 YLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKNLRPKSGYTNT 264
Query: 306 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
Y + + T + + + R + RE A L SFP +++F S ++
Sbjct: 265 YAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSSSTKR- 323
Query: 366 YALLGNS----LSIAVVAPLLQYL 385
+GN+ LS+A+V + +L
Sbjct: 324 -LQIGNAVPPLLSVALVHAVFDFL 346
>gi|283783021|ref|YP_003373775.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
gi|283441534|gb|ADB14000.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
Length = 357
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 21/174 (12%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
V++ +SG+GG+ + S + +D + + Y N H+ + + ++T+ +LD
Sbjct: 5 VIDLFSGVGGLSLGFEEEGFSVLLANEYD--ESIANAYMKN--HKTTKMVVGDITSLDLD 60
Query: 75 -MYGAH-----AWLLSPPCQPYTRQGLQKQSSDARAFSF---LKILELIPHTVKPPHMLF 125
++G + + PPCQ ++++G +K D R F F +K++EL+ P
Sbjct: 61 AVFGTYKNKIDVIIGGPPCQGFSQKGQRKTIYDKRNFLFEYYVKVVELV-----KPKYFV 115
Query: 126 VENVVGFETSDTHA--KMIEILANS-DYLTQEFILSPLQFGVPYSRPRYFCLAK 176
+ENV T++ IE L N+ Y Q +L+ FGVP +R R + K
Sbjct: 116 MENVPNLLTAEKGYFFNEIETLFNAMGYFLQHGVLNAADFGVPQNRKRAVIIGK 169
>gi|420448488|ref|ZP_14947368.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
gi|393065842|gb|EJB66670.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
Length = 222
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G+GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGVGGLSYGF-STRPYFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L+ P + EN
Sbjct: 59 CHNLPCIPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGTHK 166
>gi|386752472|ref|YP_006225691.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi169]
gi|384558730|gb|AFH99197.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi169]
Length = 348
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 145/384 (37%), Gaps = 51/384 (13%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIMQLN 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VVG + ++ Y+ + IL+ L +GVP R R + K SF+
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK--SFK-- 169
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
Q P P I H D+ L P++ +GD + G
Sbjct: 170 ----QKFHFPKP---------IKTHFSLKDALGDL----PPIQS----GENGDAL----G 204
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
+L +F + + + L+ + + G + D + + + +T +
Sbjct: 205 YLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKNLRPKSGYTNT 264
Query: 306 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
Y + + T + + + R + RE A L SFP +++F S ++
Sbjct: 265 YAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSVREGARLQSFPDNYKFCGSTSAKRL 324
Query: 366 YALLGNSLSIAVVAPLLQYLFAQA 389
+GN+ V PLL A A
Sbjct: 325 Q--IGNA-----VPPLLSVALAHA 341
>gi|255262721|ref|ZP_05342063.1| cytosine-specific methyltransferase NlaX [Thalassiobium sp. R2A62]
gi|255105056|gb|EET47730.1| cytosine-specific methyltransferase NlaX [Thalassiobium sp. R2A62]
Length = 421
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 156/383 (40%), Gaps = 57/383 (14%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+R ++ ++GIGG+R ++ V + + + + Y N+G P QG+I + A +
Sbjct: 80 FRFIDLFAGIGGIRMPFQ--ELGGHCVFSSEWDKFSQKSYAANYGEVP-QGDITQIAAND 136
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ H LL+ PCQ +++ GL++ +D R F +I ++ H P +ENV
Sbjct: 137 IP---EHDLLLAGFPCQAFSQAGLKQGFNDTRGTMFFEIQRVLAH--HRPKAFLLENVKQ 191
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC--QLLNN 189
D + IL S +E + P VP S L+ PL++R ++L
Sbjct: 192 LRGHDKGRTLNTIL--SILRGEEGAVVPEN--VPMSEEARKSLS--TPLNYRVDFEVLAA 245
Query: 190 QLLRSPSP-----LLG--NDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNT 242
+ P ++G D ++ D P + D L E + T
Sbjct: 246 KNFGVPQNRERVYIVGFDRDQVSEAEARDLPREILDGLKER---------------KSET 290
Query: 243 ETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCF 302
G + A+VD + T+ DR ++ + + G + +S C
Sbjct: 291 RLGDVLETNASVD----PKFTIS-DRLLAGHERRLRAHRAKGNGFGFSLFNAESPYCNTI 345
Query: 303 TKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSL 362
+ YY+ GS + Q + GK + R TPRE A + FP +F +S
Sbjct: 346 SARYYK----DGSEVLIDQ-SDIGK-------NPRKLTPRECARIQGFPEEFNV-GAVSN 392
Query: 363 RQRYALLGNSLSIAVVAPLLQYL 385
Q Y GNS+S+ V+ + + +
Sbjct: 393 VQNYRQFGNSVSVPVIRAIAEEM 415
>gi|238917714|ref|YP_002931231.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC
27750]
gi|238873074|gb|ACR72784.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC
27750]
Length = 311
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V+ F+SG+GG+ + D ++ A D + A Y+ NFG G+I + E+
Sbjct: 2 KVVSFFSGLGGLDKGFV--DTGYDIIWANDFDKYAVQTYKANFGEHIVLGDINEIPLEEI 59
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPH---TVKPPHMLFVENVV 130
+ PCQP++ G QK DAR F +I E++ K P + +ENV
Sbjct: 60 P--DCDILIGGFPCQPFSMMGQQKGFEDARGTLFFRIAEIVDDKIKKGKKPKAIILENVR 117
Query: 131 GFET---SDTHAKMIEILANS-DYLTQEFILSPLQFGVPYSRPRYFCL 174
T +T+ ++ IL + Y IL+ +GVP +R R + +
Sbjct: 118 SLRTHNNGETYKEIYRILHDVLGYNVFCDILNSADYGVPQTRNRTYIV 165
>gi|227500535|ref|ZP_03930589.1| possible DNA (cytosine-5-)-methyltransferase [Anaerococcus
tetradius ATCC 35098]
gi|227217363|gb|EEI82692.1| possible DNA (cytosine-5-)-methyltransferase [Anaerococcus
tetradius ATCC 35098]
Length = 321
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA-----NDVYELNFGHRPYQGNIQNL 68
++LE + GIG +R + + + +VV+ +I DKA N +Y ++ + G
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEI-DKACVKSYNALYGEDYKSKSVVGYKAPN 63
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLF 125
+L M+G+ PCQ ++R G ++ ++S R+ + + +I + P +
Sbjct: 64 EKIDLIMHGS-------PCQDFSRIGKKQGGAKNSGTRSSLLFETIRIIKEMKEKPKWII 116
Query: 126 VENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
ENV G D+ ++ L + Y ++ IL+ + FG+P R R F ++ +F
Sbjct: 117 WENVKGVLDRNMKDSFFIYLKELEDLGYESKYEILNAMDFGIPQKRERIFVVSCLGANNF 176
Query: 183 RCQLLNNQLLRSPSPLLGND 202
L + R+ S L D
Sbjct: 177 SFDKLERKETRTLSEFLEKD 196
>gi|213972219|ref|ZP_03400299.1| cytosine-specific DNA methylase [Pseudomonas syringae pv. tomato
T1]
gi|289626827|ref|ZP_06459781.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|301386398|ref|ZP_07234816.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
Max13]
gi|302062510|ref|ZP_07254051.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
K40]
gi|422585424|ref|ZP_16660502.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|213923026|gb|EEB56641.1| cytosine-specific DNA methylase [Pseudomonas syringae pv. tomato
T1]
gi|330870292|gb|EGH05001.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 382
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 159/389 (40%), Gaps = 50/389 (12%)
Query: 17 EFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-GNIQNLTAAELDM 75
EF++G GGM + + D Q + A D + K Y N+G + G++ LT EL
Sbjct: 6 EFFAG-GGMARAGLGPDW--QCMFANDFDPKKAASYATNWGDDHLRVGDVAALTTTELPG 62
Query: 76 YGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGF 132
AW S PCQ + G R+ + F K+++ + + P M+ +ENV G
Sbjct: 63 VVDLAWA-SFPCQDLSLAGAGAGLKGHRSGTFWPFWKLMKALGEEDRAPRMIVLENVCGA 121
Query: 133 ETS---DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 189
TS A + L+N Y +++ + F +P SRPR F +A RK ++ N
Sbjct: 122 ITSHDGKDFAAISAALSNGGYRFGAVVMNAVHF-LPQSRPRLFIIAVRKSSPIPHTIVAN 180
Query: 190 --QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFL 247
++ S L+ + + ++K Q W L P R F+ D V +
Sbjct: 181 GPEVEWHSSTLV--EAYSKLSKRSQSAWIWWHL---SAPPARTTIFA---DLVEDTPHGV 232
Query: 248 STGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLI------ERWGSAMDIVY----PDSK 297
+ TA VE + +S+ + PL+L + G + +Y D
Sbjct: 233 TWHTA-----------VETKKLLSM---MSPLNLAKVEAAKKSGGRIVGTIYKRTRADGP 278
Query: 298 RCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHL--RYFTPREVANLHSFPGDFQ 355
F ++ R+ G L ++ ++ + + R +PRE A L P +
Sbjct: 279 NGEKFQRAEIRFDDVAGCLRTPTGGSSRQTIMVIEGKRVRSRLLSPREAARLMGLPDTYV 338
Query: 356 FPHHLSLRQRYALLGNSLSIAVVAPLLQY 384
P + + Y L G+ ++I VV L ++
Sbjct: 339 LPKNYN--DAYHLAGDGVAIPVVRFLAEH 365
>gi|127459|sp|P15446.1|MTH2_HAEPA RecName: Full=Modification methylase HpaII; Short=M.HpaII; AltName:
Full=Cytosine-specific methyltransferase HpaII
gi|43630|emb|CAA35705.1| unnamed protein product [Haemophilus parainfluenzae]
gi|305377|gb|AAA20481.1| HpaII modification methyltransferase [Haemophilus parainfluenzae]
Length = 358
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 16/176 (9%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
E + ++ ++GIGG R ++ ++ + + + + +++A YE NFG PY ++T
Sbjct: 30 EKFTFIDLFAGIGGFRIAMQ--NLGGKCIFSSEWDEQAQKTYEANFGDLPY----GDITL 83
Query: 71 AELDMYGAHAWLL---SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
E + + + PCQ ++ G + D R F + E+I P F+E
Sbjct: 84 EETKAFIPEKFDILCAGFPCQAFSIAGKRGGFEDTRGTLFFDVAEIIRR--HQPKAFFLE 141
Query: 128 NVVGFETSDTHAKMIEIL----ANSDYLTQE-FILSPLQFGVPYSRPRYFCLAKRK 178
NV G + D + IL + Y E I++ FGVP +R R + + K
Sbjct: 142 NVKGLKNHDKGRTLKTILNVLREDLGYFVPEPAIVNAKNFGVPQNRERIYIVGFHK 197
>gi|428299407|ref|YP_007137713.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
gi|428235951|gb|AFZ01741.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
Length = 458
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 144/403 (35%), Gaps = 80/403 (19%)
Query: 15 VLEFYSGIGGMRYSLMKADVSA------QVVEAFDINDKANDVYELNFGHRPYQ-GNIQN 67
V+ + GIGG+ A ++ A D N K ++Y+ NF +I
Sbjct: 9 VVSLFCGIGGLDLGFQSVVTEASRSAGFEIAIAIDNNPKVLELYQNNFPDTTVLCKDIGE 68
Query: 68 LTAAEL---------DMYGAHAWLLS-PPCQPYTRQGLQKQSSDARAFSFLKILELIPHT 117
+TA E+ D G A ++ PPCQ ++ G QK D R+ LK + L+
Sbjct: 69 ITATEIRDIIQHKYQDWDGEIAAVIGGPPCQGFSVAGKQKLDDD-RSQLVLKFINLVIEL 127
Query: 118 VKPPHMLFVENVVGFETSDTHAKMIEILANS------DYLTQEFILSPLQFGVPYSRPRY 171
P M +ENV E K I N+ Y+ +++L+ FGVP R R
Sbjct: 128 --NPSMFVMENVPAIEWK----KFAGITGNAIALIEEHYILSKWLLTASDFGVPQKRQRA 181
Query: 172 FCLAKR-----KPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDP 226
+ R P + R S D++ + D D+W+ L
Sbjct: 182 IWVGSRFGEVAAPTENEVRFSIGDANRKVSVFDAIADLSHLPI-DSQTDTWE--LNQKGE 238
Query: 227 VERFLE--FSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIER 284
++L+ F N +G L+T A ++
Sbjct: 239 YAQYLDKIFPELSKSSNLISGCLATAHTAATQ--------------------------KK 272
Query: 285 WGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREV 344
+G + P K + YR V S N+ A + +H R T RE
Sbjct: 273 YGDTV----PGEKEPTTWA---YRLVSDGFSPTLRAGSGNRTAARPIHYEHARVITVREA 325
Query: 345 ANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387
A LHSFP F F S + +GNS V PLL Y A
Sbjct: 326 ARLHSFPDWFDF--GASKLAAHKAIGNS-----VPPLLAYAIA 361
>gi|420487387|ref|ZP_14985991.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|420521170|ref|ZP_15019601.1| modification methylase BanI [Helicobacter pylori Hp P-8b]
gi|393101964|gb|EJC02530.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|393127757|gb|EJC28202.1| modification methylase BanI [Helicobacter pylori Hp P-8b]
Length = 423
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 14 RVLEFYSGIGGMRY----SLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
R ++ ++G+GG+R +L + +Q V + +I A Y +F P QG++ +
Sbjct: 19 RFVDLFAGLGGLRLGFEQALFSIGLKSQCVLSSEIKKSALQAYINHFKETP-QGDVTQID 77
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ + L PCQP++ G ++ D R F +I+ + K P +ENV
Sbjct: 78 TNAIPNF--DILLAGFPCQPFSSAGKRRGLDDTRGTLFFEIMRFL--LAKKPKGFLLENV 133
Query: 130 VGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
G T D T + M+ L Y +L+ FGV +R R + +
Sbjct: 134 PGLLTHDKGKTFSIMLGHLKECGYFVNYKLLNAKDFGVAQNRERLYIVG 182
>gi|416053093|ref|ZP_11578704.1| cell division protein MukB [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|418464457|ref|ZP_13035397.1| Type II modification methyltransferase HpaII/DNA
(cytosine-5-)-methyltransferase [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|347991393|gb|EGY32869.1| cell division protein MukB [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|359757253|gb|EHK91409.1| Type II modification methyltransferase HpaII/DNA
(cytosine-5-)-methyltransferase [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 359
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 20/178 (11%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNI----- 65
E + ++ ++GIGG R ++ ++ + V + + +++A YE NFG PY G+I
Sbjct: 32 EKFTFIDLFAGIGGFRIAMQ--NLGGKCVFSSEWDEQAQKTYEANFGDLPY-GDITLEET 88
Query: 66 QNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
+++ + D+ A PCQ ++ G + D R F + E+I P F
Sbjct: 89 KSVIPKKFDILCAGF-----PCQAFSIAGKRGGFEDTRGTLFFDVAEIIRR--HQPKAFF 141
Query: 126 VENVVGFETSDTHAKMIEILA--NSD---YLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
+ENV G D + IL D ++ + I++ FGVP +R R + + K
Sbjct: 142 LENVKGLTNHDKGRTLKTILNVLREDLGYFVPKPEIINAKNFGVPQNRERIYIVGFHK 199
>gi|421719923|ref|ZP_16159207.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
gi|407221246|gb|EKE91051.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
Length = 160
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 17/168 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPYFELIWANDIDKDAILSYQAN--HKEVQTILCDIMQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K +A F +L++L+L VKP +F EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEEANLFKEYLRLLDL----VKPKIFVF-EN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYF 172
VVG S ++ + + N+ Y+ + IL+ L +GVP R R F
Sbjct: 114 VVGL-MSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVF 160
>gi|329769727|ref|ZP_08261128.1| hypothetical protein HMPREF0433_00892 [Gemella sanguinis M325]
gi|328838089|gb|EGF87707.1| hypothetical protein HMPREF0433_00892 [Gemella sanguinis M325]
Length = 406
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 8/168 (4%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-GNIQNLTAA 71
+ V F+SG+GG+ K + +VV A +I+ A Y+LNF + +I +
Sbjct: 10 YNVAAFFSGVGGIELGFEKTN-KFRVVYANEIDKNARITYKLNFPNVFLDPRDIHEVKPE 68
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
E+ + PCQ ++ G +K D R F ++L +I + K P +F+ENV
Sbjct: 69 EIKEEKLDVIVGGFPCQAFSIAGYRKGFEDERGDLFFELLRIIKN--KKPRAIFLENVKN 126
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
T D T + E L ++Y + +L+ +G +P +R R + +
Sbjct: 127 MVTHDHGNTFKVIKEALTENNYYIKWKVLNGKDYGNIPQNRERIYIVG 174
>gi|427732095|ref|YP_007078332.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
gi|427368014|gb|AFY50735.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
Length = 314
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNI-QNLTAAE 72
+ ++ ++G GG+ SL + +V AFD A +VY NF H ++ ++ + A
Sbjct: 2 KAIDLFAGCGGL--SLGFQNAGFDIVAAFDYWPSAIEVYRENFQHTIFEKDLLREDVCAL 59
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENV 129
+ + + PPCQ ++ G ++ + RA F F I+ + P+ +ENV
Sbjct: 60 IASFNPEIIIGGPPCQDFSSAG-KRDENLGRADLTFVFANIISQVK-----PNWFVMENV 113
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 189
S ++EI S Y IL+ GVP +R RYF + + L + LN+
Sbjct: 114 ERISKSKVLKTVLEIFKKSGYGLTSSILNASYCGVPQARRRYFLIGQ---LHGKDDALNH 170
Query: 190 QLLRSPS 196
L++ S
Sbjct: 171 YLIKHQS 177
>gi|218247578|ref|YP_002372949.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|218168056|gb|ACK66793.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
Length = 727
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 14/172 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG--NIQNL 68
+ ++ ++ ++GIGG R + +A Q V + +IN+ VY NF P I
Sbjct: 4 QPFKFIDLFAGIGGFRLAFEQA--QYQCVYSCEINEYCQKVYYNNFDECPDNDVTKINPH 61
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
T D+ A PCQP++ G ++ +D R F I ++I K P + +EN
Sbjct: 62 TLPNFDVLTA-----GFPCQPFSICGKKEGFNDTRGTLFFYICQII--AAKQPQAVILEN 114
Query: 129 V---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
V + + T +I L + YL +L+ FGVP R R +A R
Sbjct: 115 VKHLIHHQQGKTLETIIYSLEDLGYLVDYQLLNAKDFGVPQHRERIVIIATR 166
>gi|10954474|ref|NP_039765.1| TIM [Methanothermobacter thermautotrophicus]
gi|266583|sp|P29567.1|MTHT_METTF RecName: Full=Modification methylase MthTI; Short=M.MthTI; AltName:
Full=Cytosine-specific methyltransferase MthTI
gi|44641|emb|CAA48436.1| TIM [Methanothermobacter thermautotrophicus]
gi|149743|gb|AAA73370.1| TIM [Methanothermobacter thermautotrophicus]
Length = 330
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 13/177 (7%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL- 73
+ F+SG GG+ KA + +V A D +E N G + + I+ L +E+
Sbjct: 5 IASFFSGAGGLDLGFTKAGFN--IVFANDNWKGCWKTFEKNHGIKINKKPIEWLKPSEIP 62
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
D+ G ++ PPCQ ++ G + D R +F ++L+ K P ENV G
Sbjct: 63 DVVG---FIGGPPCQSWSLAGSMCGADDPRGKTFYAYVDLVKE--KDPLFFLAENVPGI- 116
Query: 134 TSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
S TH + L NS Y + +L+ +GVP R R F + R+ L+ + +
Sbjct: 117 VSRTHLPEFKRLVNSFIDIGYNVEYKVLNAKDYGVPQDRKRVFIVGYREDLNLKFEF 173
>gi|188527268|ref|YP_001909955.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi470]
gi|188143508|gb|ACD47925.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Shi470]
Length = 348
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 146/384 (38%), Gaps = 51/384 (13%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIMQLN 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VVG + ++ Y+ + IL+ L +GVP R R + K SF+
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYVLEHAILNALDYGVPQIRERVILVGVLK--SFK-- 169
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
Q P P I H D+ L P++ +GD + G
Sbjct: 170 ----QKFHFPKP---------IKTHFSLKDALGDL----PPIQS----GENGDAL----G 204
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
+L +F + + + L+ + + + G + D + + + +T +
Sbjct: 205 YLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQMLKDGQSKDDLPKNLRPKSGYTNT 264
Query: 306 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
Y + + T + + + R + RE A L SFP +++F S ++
Sbjct: 265 YAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSVREGARLQSFPDNYKFCGSTSAKRL 324
Query: 366 YALLGNSLSIAVVAPLLQYLFAQA 389
+GN+ V PLL A A
Sbjct: 325 Q--IGNA-----VPPLLSVALAHA 341
>gi|397634955|gb|EJK71655.1| hypothetical protein THAOC_06884 [Thalassiosira oceanica]
Length = 632
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 142/402 (35%), Gaps = 85/402 (21%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF---GHRP---Y 61
N+ ++ E ++GIGG R L + + A +I+ A VY NF GH
Sbjct: 225 NEASSFTYAELFAGIGGFRLGLDA--IGGKCAYANEIDPYACSVYRRNFSRNGHDADSLL 282
Query: 62 QGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPP 121
+G+I +L M PCQ ++R+G Q D R + +++ ++ T +P
Sbjct: 283 EGDILDLCPERDAMPTVDVLSGGFPCQAFSRRGEQGALRDDRGHLYRELVRVLCAT-RPK 341
Query: 122 HMLFVENVVGF------------ETSDTHAKMIEILANSDYLTQEFILSPL--QFGVPYS 167
+F ENV G E A M IL + E + L ++ VP
Sbjct: 342 SFIF-ENVKGLVTLEGGYVNKGGEEMKAGAVMQRILDEFEACGYEVSWNILDAKYWVPQR 400
Query: 168 RPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV 227
R R F + R DD+ SWD
Sbjct: 401 RKRLFIVGIR------------------------DDIDAQF-------SWDW-------- 421
Query: 228 ERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLI-ERWG 286
+ EF +G ST + D E EVD C+S F L +RW
Sbjct: 422 --YDEFKTNG----------STDDRVLSDI--LEPPHEVDTCLSSSQFDAMKRLRGDRWH 467
Query: 287 SAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVAN 346
+ V+ +K+ SY + T + +A K R+ TPRE A
Sbjct: 468 EVEEAVFDVNKKTSTLISSYRGHSSITTKYVME-------EADGTKRDVPRFLTPRECAR 520
Query: 347 LHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
L FP + P +A + AVV PL+ L ++
Sbjct: 521 LQGFPEWYAVPLAPDSDHEHAHFYKGIGNAVVPPLIMRLGSE 562
>gi|384899203|ref|YP_005774583.1| Type II DNA modification enzyme [Helicobacter pylori F30]
gi|317179147|dbj|BAJ56935.1| Type II DNA modification enzyme [Helicobacter pylori F30]
Length = 351
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 148/384 (38%), Gaps = 50/384 (13%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIMQLN 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VVG + ++ Y+ + IL+ L +GVP R R + K SF+
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK--SFK-- 169
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
Q P P I H D+ L P++ +GD + G
Sbjct: 170 ----QKFHFPKP---------IKTHFSLKDALGDL----PPIQS----GENGDAL----G 204
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
+L +F + + + L+ + + G + D + + + +T +
Sbjct: 205 YLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKNLRPKSGYTNT 264
Query: 306 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
Y + + T + + + R + RE A L SFP +++F S ++
Sbjct: 265 YAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSSSAKR- 323
Query: 366 YALLGNS----LSIAVVAPLLQYL 385
+GN+ LS+A+V + +L
Sbjct: 324 -LQIGNAVPPLLSVALVHAVFDFL 346
>gi|308184264|ref|YP_003928397.1| type II DNA modification enzyme [Helicobacter pylori SJM180]
gi|308060184|gb|ADO02080.1| type II DNA modification enzyme [Helicobacter pylori SJM180]
Length = 188
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPHFELIWANDIDKDAILSYQAN--HKEAQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ L Y+ + IL+ L +G P R R F + K
Sbjct: 114 VVGLMSMQKGQLFQRICNALKERGYILEHAILNALDYGAPQVRERVFLVGALK 166
>gi|148988377|ref|ZP_01819824.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
SP6-BS73]
gi|147926058|gb|EDK77132.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
SP6-BS73]
Length = 343
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 151/394 (38%), Gaps = 102/394 (25%)
Query: 14 RVLEFYSGIGGMRYSLMK---------ADVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
++ +SG GG AD ++V A DI D AN ++E NFG P N
Sbjct: 5 KIASLFSGGGGTDIGFAGGFDFLGKHYADNQIEIVYANDIEDSANKMFEKNFGVTPDNRN 64
Query: 65 IQNLTAAELDMYGAHAWLLSPPCQPYT-------RQGLQKQSSDARAFSFLKILELIPHT 117
I+ + + E+ + PCQ ++ R G++ D + F +++ ++
Sbjct: 65 IREIKSDEIPSFDILTGGF--PCQSFSVSAQNPKRLGIK----DEKGTLFFEMVRVL--K 116
Query: 118 VKPPHMLFVENVVGFETSDTHAK---MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 174
P F ENV G +++ +IE + Y + ++GVP R R F +
Sbjct: 117 AHQPKAFFAENVKGILSANNKEAFPLIIEEFEKAGYNVSYKLCVATKYGVPQKRERVFIV 176
Query: 175 AKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFS 234
RK L+F + P+ +D T + K++ D E++ FS
Sbjct: 177 GIRKDLNFTFEF-------PEEPIQNVEDYTPL-----------KVILQQDIDEKYY-FS 217
Query: 235 NSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYP 294
Q G L++ + + G A++ + VS L +SL ++ D V
Sbjct: 218 ERAVQ-----GMLNSKSGKKMNKGRAQDIEQPSNTVS--SHLAKVSL-----NSTDPVLL 265
Query: 295 DSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDF 354
++ R Y RY TPREVA + SFP ++
Sbjct: 266 ENGR-------YRRY------------------------------TPREVARIQSFPENY 288
Query: 355 QFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
+ S +Y +LGN+ + P++ + A+
Sbjct: 289 ELLG--SEGAQYRMLGNA-----IPPVMMWYIAE 315
>gi|409993125|ref|ZP_11276279.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca]
gi|79835469|gb|ABB52095.1| Mod [Arthrospira platensis]
gi|291565921|dbj|BAI88193.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
gi|409935999|gb|EKN77509.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca]
Length = 314
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 6/164 (3%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE- 72
R ++ ++G GG+ A + AF+I A VY+ NF H +Q ++ +
Sbjct: 2 RTIDLFAGCGGLSLGFQNAGFDMKA--AFEIWKPAIKVYQRNFSHPIFQVDLSKESVINT 59
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
L + + PPCQ ++ G ++ S RA + +I ++KP +ENV
Sbjct: 60 LGEWKPEVIIGGPPCQDFSSAG-KRDESLGRANLTINFAGIIA-SIKP-QFFVMENVSRI 116
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
+ T +IL NS Y +L GVP +R RYF + +
Sbjct: 117 TKTQTLKVTWQILKNSGYGLTASVLDASYCGVPQARKRYFLIGE 160
>gi|421886425|ref|ZP_16317599.1| LcmA protein [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|379983821|emb|CCF89872.1| LcmA protein [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
Length = 355
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLT---- 69
V++F+ G GG L +A V DI+ +A++ Y NF + +I+N+T
Sbjct: 3 VIDFFCGCGGASEGLRQAGF--DVALGIDIDPQASETYRANFPDAAFISDDIRNVTVEKV 60
Query: 70 AAELDMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
A + A LLS PCQP+++Q K D R S L T+ P +++ +E
Sbjct: 61 ANSIAFKSADGLLLSACAPCQPFSQQNKFKTEDDER-ISLLDETHRFVSTLLPEYIM-LE 118
Query: 128 NVVGFETSDTH-----AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
NV G + D + I +L Y F+ + ++GVP R R+ LA
Sbjct: 119 NVPGIQKIDGSKESPFTRFIALLDKLGYEYVYFVANAEKYGVPQRRKRFVLLA 171
>gi|195867543|ref|ZP_03079546.1| type II restriction-modification system methylation subunit
[Ureaplasma urealyticum serovar 9 str. ATCC 33175]
gi|195867960|ref|ZP_03079957.1| type II restriction-modification system methylation subunit
[Ureaplasma urealyticum serovar 9 str. ATCC 33175]
gi|195660356|gb|EDX53616.1| type II restriction-modification system methylation subunit
[Ureaplasma urealyticum serovar 9 str. ATCC 33175]
gi|195660787|gb|EDX54041.1| type II restriction-modification system methylation subunit
[Ureaplasma urealyticum serovar 9 str. ATCC 33175]
Length = 323
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA-----NDVYELNFGHRPYQGNIQNL 68
++LE + GIG +R + + + +VV+ +I DKA N +YE N+ + G
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEI-DKACVKSYNALYEENYKPKSVLGYKAPN 63
Query: 69 TAAELDMYGAHAWLLSPPCQPYTR----QGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
+L M+G+ PCQ ++R QG K S + + F + + +I P +
Sbjct: 64 EKIDLIMHGS-------PCQDFSRIGKKQGGVKNSGTSSSLLF-ETIRIIKEMKDKPKWI 115
Query: 125 FVENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
ENV G D+ ++ L + Y ++ IL+ + FG+P R R F ++ +
Sbjct: 116 IWENVKGVLDRNMRDSFFIYLKELEDLGYESKYEILNAMDFGIPQKRERIFVVSCLGANN 175
Query: 182 FRCQLLNNQLLRSPSPLLGND 202
F L + R S L D
Sbjct: 176 FSFNKLERKETRPLSEFLEKD 196
>gi|254410214|ref|ZP_05023994.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
gi|196183250|gb|EDX78234.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
Length = 392
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAEL 73
+E + GIGG R + + +++ + A D KA VY FG + +QG+I L +
Sbjct: 9 TVELFCGIGGFRIAADQRNIAT--IWANDRCPKACQVYRDRFGKAQLHQGDIYQL----V 62
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV--- 129
D H L + PCQP++ G +K D R F I++++ P +ENV
Sbjct: 63 DEIPPHDLLTAGFPCQPFSSAGKKKGVRDPRGHIFQVIIDVLKR--HKPRFFILENVKRL 120
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
+ E A ++ LA+ DY + +++ + G+P +R R L
Sbjct: 121 LSMEEGTHFATILSELAHLDYTIEWRLVNAMHLGLPQNRQRVVILG 166
>gi|335030551|ref|ZP_08524039.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK1076]
gi|334265842|gb|EGL84333.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK1076]
Length = 406
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60
M + N E + + F+SG+GG+ + + +VV A + + A Y+LN
Sbjct: 1 MTNSVSSNRSEKYNIAAFFSGVGGIELGFEQTN-EFRVVYANEFDKYARQTYQLNHPETY 59
Query: 61 YQG-NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
G +I + ++ + PCQ ++ G +K D R F ++L +I
Sbjct: 60 LDGRDIHAVQPEDIPAERVDVIMGGFPCQAFSIAGYRKGFDDDRGDLFFELLRMIEGC-- 117
Query: 120 PPHMLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
P +F+ENV VG + +T + E L ++Y + +L+ +G +P +R R + +
Sbjct: 118 KPRAIFIENVKNMVGHDHGNTFKVIREALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|126660265|ref|ZP_01731380.1| putative DNA modification methylase (N.MgoV) [Cyanothece sp.
CCY0110]
gi|126618440|gb|EAZ89194.1| putative DNA modification methylase (N.MgoV) [Cyanothece sp.
CCY0110]
Length = 458
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF--GHRPYQGNIQNLTAAEL 73
++F++GIGG R L K + + + +I+ +A VY+ NF + + N+ +++
Sbjct: 31 IDFFAGIGGFRIPLEK--LGGKCLGYSEIDKEAIKVYQQNFISYYNSEELNLGDISKINS 88
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
++ PCQP++ G K +D R + ++ L+ P ENV G
Sbjct: 89 LPKNVDLFVGGVPCQPWSVAGKLKGFNDPRGQLWFNVIRLVKDY--QPKAFIFENVKGLT 146
Query: 134 TSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
T K+ E L N +Y+ +++ FGVP +R R F + RK
Sbjct: 147 TGKNKDKL-EYLVNQFEQVNYVVSWKVINSYDFGVPQNRERVFIVGIRK 194
>gi|452206973|ref|YP_007487095.1| site-specific DNA-methyltransferase (cytosine-specific)
[Natronomonas moolapensis 8.8.11]
gi|452083073|emb|CCQ36357.1| site-specific DNA-methyltransferase (cytosine-specific)
[Natronomonas moolapensis 8.8.11]
Length = 370
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 28/195 (14%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA---- 70
++ + G GG+ + L +A +S V D + YE N Q +++ L+
Sbjct: 5 AVDLFCGSGGLSHGLEQAGISVNV--GVDKDPHCKHAYEQNIDAEYRQTDVRPLSQDPER 62
Query: 71 --------AELDMYGAHAWLLSPPCQPYTRQGLQKQSS--DARAFSFLKILELIPHTVKP 120
++LD+ GA A PCQPY+ G K + D + + LK ++ I V+
Sbjct: 63 VARMFPWDSDLDVLGACA-----PCQPYSTMGQSKNKTHQDHQKWGLLKDIKKISEYVE- 116
Query: 121 PHMLFVENVVGFETSDTHAKMIEILANSDYLTQE----FILSPLQFGVPYSRPRYFCLA- 175
P ++ ENV D + + ++ L + Y + + P ++G+P +R R+ +A
Sbjct: 117 PDIIITENVPQVRKDDVYDEFVQTLKDLGYHVNDDENKKVYCP-EYGIPQNRKRWVMMAS 175
Query: 176 KRKPLSFRCQLLNNQ 190
K P+S L N+
Sbjct: 176 KEGPISLPDPLYENE 190
>gi|416250697|ref|ZP_11637377.1| DcmB [Moraxella catarrhalis CO72]
gi|326574028|gb|EGE23977.1| DcmB [Moraxella catarrhalis CO72]
Length = 337
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/370 (19%), Positives = 134/370 (36%), Gaps = 65/370 (17%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAE 72
+++ +SG GG+ KA V +D + A ++ N + + +G+I+++ +
Sbjct: 2 KIISLFSGCGGLDLGFKKAGFKIAVANEYDKSIWA--TFKANHHNTKLIEGDIRHILEED 59
Query: 73 L--DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
D+ G + PPCQ ++ G + +DAR F + ++ + K P ENV
Sbjct: 60 FPNDIDGI---IGGPPCQSWSEAGALRGINDARGQLFYDYIRILKN--KQPKFFLAENVS 114
Query: 131 GF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 187
G SD ++ + + Y +++ +GV R R F + RK L+
Sbjct: 115 GMLANRHSDAVKSILNMFDDCGYDVTVNMVNAKNYGVAQERKRVFYIGFRKDLAINFNF- 173
Query: 188 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFL 247
P DD + K D WD
Sbjct: 174 -------PIGSTAEDDNKITLK----DVIWD---------------------------LQ 195
Query: 248 STGTAAVDDFGAAEETVEVDRCV--SIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
T AA+D + + + S + + ++ W V ++C ++
Sbjct: 196 QTAVAALDKNQTNPKAINNNEYFIGSFSPIYMSRNRVKAWHEQGFTVQASGRQCQLHPQA 255
Query: 306 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
GT + KE R T REVA + FP DF+F + ++
Sbjct: 256 PKMQKHGTNDFRFAIG----------KEHLYRRMTVREVARIQGFPDDFKFIYQ-NVNDG 304
Query: 366 YALLGNSLSI 375
Y ++GN++ +
Sbjct: 305 YKMIGNAVPV 314
>gi|212695555|ref|ZP_03303683.1| hypothetical protein ANHYDRO_00072 [Anaerococcus hydrogenalis DSM
7454]
gi|212677433|gb|EEB37040.1| hypothetical protein ANHYDRO_00072 [Anaerococcus hydrogenalis DSM
7454]
Length = 321
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 19/173 (10%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA-----NDVYELNFGHRPYQGNIQNL 68
++LE + GIG +R + + + +VV+ +I DKA N +Y N+ + G
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEI-DKACVKSYNALYGENYKPKSVVGYKIPN 63
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLF 125
+L M+G+ PCQ ++R G ++ ++S R+ + + +I + P +
Sbjct: 64 EKIDLIMHGS-------PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKEKPKWII 116
Query: 126 VENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
ENV G D+ ++ L N Y ++ IL+ + FG+P R R F ++
Sbjct: 117 WENVKGVLDRNMRDSFFIYLKELENLGYESKYEILNAMDFGIPQKRDRIFVVS 169
>gi|431758610|ref|ZP_19547235.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium E3083]
gi|430616978|gb|ELB53864.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium E3083]
Length = 353
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 135/349 (38%), Gaps = 88/349 (25%)
Query: 35 SAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPPCQPYT--- 91
+ ++V A DI AN ++E NFG +P + NI+ + ++E+ + PCQ ++
Sbjct: 35 NVEIVYANDIEKSANIMFEANFGIKPDERNIREVKSSEIPDFDILTGGF--PCQSFSVSA 92
Query: 92 ----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK---MIEI 144
R G++ D R F +++ ++ + P ENV G +++ H +I+
Sbjct: 93 QNPKRLGIK----DERGTLFFEMVRILRE--RQPVAFVAENVKGILSANNHEAFPLIIKE 146
Query: 145 LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDM 204
+ Y+ + FGVP R R F + R F+ + S +P+ D
Sbjct: 147 FEEAGYVVNHKLCFAADFGVPQKRERVFIVGIRADQGFQYEF-------SEAPIRSEQDY 199
Query: 205 TVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETV 264
I+ K+LE + +E FS Q G L + T+ + G A++
Sbjct: 200 VSIS----------KILE--EKIEDKYFFSEKAVQ-----GMLKSRTSKTMNKGRAQDIN 242
Query: 265 EVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKN 324
+ VS S LA V +
Sbjct: 243 KPSNTVS-------------------------------------------SHLAKVSLNS 259
Query: 325 KGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSL 373
+ ++ RY TPREVA + SFP +++ S +Y +LGN++
Sbjct: 260 TDPVLLINGKYRRY-TPREVARIQSFPEEYKLIG--SEGAQYRMLGNAI 305
>gi|421231709|ref|ZP_15688354.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae 2080076]
gi|395596199|gb|EJG56421.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae 2080076]
Length = 346
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 151/394 (38%), Gaps = 102/394 (25%)
Query: 14 RVLEFYSGIGGMRYSLMK---------ADVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
++ +SG GG AD ++V A DI D AN ++E NFG P N
Sbjct: 5 KIASLFSGGGGTDIGFAGGFDFLGKHYADNQIEIVYANDIEDSANKMFEKNFGVTPDNRN 64
Query: 65 IQNLTAAELDMYGAHAWLLSPPCQPYT-------RQGLQKQSSDARAFSFLKILELIPHT 117
I+ + + E+ + PCQ ++ R G++ D + F +++ ++
Sbjct: 65 IREIKSDEIPSFDILTGGF--PCQSFSVSAQNPKRLGIK----DEKGTLFFEMVRVL--K 116
Query: 118 VKPPHMLFVENVVGFETSDTHAK---MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 174
P F ENV G +++ +IE + Y + ++GVP R R F +
Sbjct: 117 AHQPKAFFAENVKGILSANNKEAFPLIIEEFEKAGYNVSYKLCVATKYGVPQKRERVFIV 176
Query: 175 AKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFS 234
RK L+F + P+ +D T + K++ D E++ FS
Sbjct: 177 GIRKDLNFTFEF-------PEEPIQNVEDYTPL-----------KVILQQDIDEKYY-FS 217
Query: 235 NSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYP 294
Q G L++ + + G A++ + VS L +SL ++ D V
Sbjct: 218 ERAVQ-----GMLNSKSGKKMNKGRAQDIEQPSNTVS--SHLAKVSL-----NSTDPVLL 265
Query: 295 DSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDF 354
++ R Y RY TPREVA + SFP ++
Sbjct: 266 ENGR-------YRRY------------------------------TPREVARIQSFPENY 288
Query: 355 QFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
+ S +Y +LGN+ + P++ + A+
Sbjct: 289 ELLD--SEGAQYRMLGNA-----IPPVMMWYIAE 315
>gi|421718682|ref|ZP_16157978.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
gi|407219782|gb|EKE89594.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
Length = 312
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 15/172 (8%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++F SGIGG R L + + + V +IND+A YEL F G++ + +L
Sbjct: 1 MDFCSGIGGGRLGLEQCHL--KCVGHAEINDEALRTYELFFKDTYNFGDLMRINPNDLPD 58
Query: 76 YGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGF 132
+ A + PCQ ++ G +K D R + ++IL+ VK P +ENV G
Sbjct: 59 FD--ALVSGFPCQAFSINGKRKGLEDERGTIIYGLIRILK-----VKQPKCFLLENVKGL 111
Query: 133 ---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ +T +I+ L + Y T IL+ F + R R + + RK L
Sbjct: 112 IHHKQQETFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLK 163
>gi|365128268|ref|ZP_09340553.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum sp.
4_3_54A2FAA]
gi|363623305|gb|EHL74429.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum sp.
4_3_54A2FAA]
Length = 367
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 13 WRVLEFYSGIGGMRYSL--MKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-GNIQNLT 69
W + EF++G G + Y L M A + A DI+++ VYE NFG ++ G+I+++
Sbjct: 19 WTMHEFFAGSGLVAYGLKGMFAPIWAN-----DISEQKAAVYEANFGCEHFELGDIKDVN 73
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+L AH S PCQ + G +R+ + L ++ + P +L +ENV
Sbjct: 74 GRDLPF--AHLSWASFPCQDLSLAGSLGGIHASRSGLVWEWLRVLDEMEEKPRILTLENV 131
Query: 130 VGFETS---DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
G ++ D + + L Y +L+ F VP SRPR F +A
Sbjct: 132 TGLLSTNGGDNYRVLHMALVERGYDCGAIVLNASHF-VPQSRPRVFVIA 179
>gi|422875785|ref|ZP_16922255.1| DNA methylase [Streptococcus sanguinis SK1056]
gi|332362221|gb|EGJ40021.1| DNA methylase [Streptococcus sanguinis SK1056]
Length = 412
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60
M + + E + + F+SG+GG+ + + +VV A + + A Y+LN
Sbjct: 7 MTNSVSSDHSEKYNIAAFFSGVGGIELGFEQTN-EFRVVYANEFDKYARQTYQLNHPDTY 65
Query: 61 YQG-NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
G +I ++ ++ + PCQ ++ G +K D R F ++L +I +
Sbjct: 66 LDGRDIHDVQPEDIPAERVDVIMGGFPCQAFSIAGYRKGFDDDRGDLFFELLRMIEW--R 123
Query: 120 PPHMLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
P +F+ENV VG + +T + E L ++Y + +L+ +G +P +R R + +
Sbjct: 124 KPRAIFIENVKNMVGHDHGNTFKVIREALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 183
>gi|440752731|ref|ZP_20931934.1| hypothetical protein O53_1103 [Microcystis aeruginosa TAIHU98]
gi|440177224|gb|ELP56497.1| hypothetical protein O53_1103 [Microcystis aeruginosa TAIHU98]
Length = 728
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
E R ++ ++GIGG R + V V + +I++ VY NF P Q +I+ +
Sbjct: 3 NEKLRFIDLFAGIGGFRLAF--ESVGYDCVYSCEIDENCQKVYFNNFQEIPDQ-DIRKIA 59
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+L + PCQP++ G + D R F I E++ +K P ++ +ENV
Sbjct: 60 IHDLPDF--EVLTAGFPCQPFSISGKRAGFRDTRGTLFFHICEIV--ELKKPKIILLENV 115
Query: 130 VGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
D K ++I+ +S YL +L+ FGVP +R R +A +
Sbjct: 116 KHLIHLDK-GKNLDIILHSLEELGYLVDYKLLNAKNFGVPQNRERIIIIATQ 166
>gi|307067513|ref|YP_003876479.1| site-specific DNA methylase [Streptococcus pneumoniae AP200]
gi|306409050|gb|ADM84477.1| Site-specific DNA methylase [Streptococcus pneumoniae AP200]
Length = 321
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 23/202 (11%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA--- 70
++LE + GIG +R + + + +VV+ +I+ Y +G ++ A
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEIDKACVKSYNALYGEDYKAKSVVRYKAPNE 64
Query: 71 -AELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLFV 126
+L M+G+ PCQ ++R G ++ ++S R+ + + +I P +
Sbjct: 65 KIDLIMHGS-------PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKDKPKWIIW 117
Query: 127 ENVVGFETSD------THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
ENV G + + K +EIL Y ++ IL+ + FG+P R R F ++
Sbjct: 118 ENVKGVLDRNMRDSFFIYLKELEILG---YESKYEILNAMDFGIPQKRERIFVVSYLGAN 174
Query: 181 SFRCQLLNNQLLRSPSPLLGND 202
+F L + R S L ND
Sbjct: 175 NFSFNKLERKETRPLSEFLEND 196
>gi|156095147|ref|XP_001613609.1| DNA (cytosine-5)-methyltransferase-like protein 2 [Plasmodium vivax
Sal-1]
gi|148802483|gb|EDL43882.1| DNA (cytosine-5)-methyltransferase-like protein 2, putative
[Plasmodium vivax]
Length = 807
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 102/250 (40%), Gaps = 40/250 (16%)
Query: 101 DARAFSFLKILELIPHTVKP--PHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILS 158
D R+ SF I L+ + P +F+ENV FE S + I + +Y Q ++LS
Sbjct: 305 DERSRSFFHICNLLKKVKEENLPKYIFIENVRNFELSSSFLYFINSVK-KNYNFQTYLLS 363
Query: 159 PLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDM----TVITKHDQPD 214
PLQ+G+P R R++C+ +RK S + +PL N M + T + P+
Sbjct: 364 PLQYGIPNERLRFYCICRRKDKSVGLTSWESFPNGGTAPLYSNSLMPAKCILRTFENNPN 423
Query: 215 DSWDKLLESCDP-VERFLEFSNSGD-QVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSI 272
P + FL+ ++ NT G ++ + ++ T+E +C S
Sbjct: 424 FRPSPKYSFYTPSLATFLDHNDKYPIMCNTSEG-INLTNETLQEYEVKNSTLE--KCSS- 479
Query: 273 DHFLVPLSLIERWGSA-------------------------MDIVYPDSKRCCCFTKSYY 307
F + I R G+ D++ + CFT +Y
Sbjct: 480 --FCFDMIDINRNGNVCCFDGGSYFGQKSEAIRDLPHERNLRDLINSNKVHSMCFTSNYA 537
Query: 308 RYVKGTGSLL 317
RY+ G+GS+L
Sbjct: 538 RYINGSGSVL 547
>gi|420477123|ref|ZP_14975783.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-23]
gi|393093971|gb|EJB94584.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-23]
Length = 352
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-STHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L+ P + EN
Sbjct: 59 CHNLPCIPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLVK-----PKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ DY+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERDYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|83955480|ref|ZP_00964111.1| C-5 cytosine-specific DNA methylase [Sulfitobacter sp. NAS-14.1]
gi|83840124|gb|EAP79299.1| C-5 cytosine-specific DNA methylase [Sulfitobacter sp. NAS-14.1]
Length = 384
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 20/177 (11%)
Query: 17 EFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNI----QNLTAA 71
EF+ G G +R +L V A DI+ VY N+G +QG+I +L A
Sbjct: 13 EFFCGGGMVRAALQD---RWDCVLANDIDAMKCKVYAQNWGQAALHQGDIAAMPDDLLAR 69
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP---PHMLFVEN 128
++DMY A S PCQ ++ G + AR+ F + I +K P ++ EN
Sbjct: 70 QIDMYWA-----SSPCQDFSLAGKGRGLGGARSGVFAHWADKIATAIKAGFAPRIIAFEN 124
Query: 129 VVGFETSDTHAKMIEILAN---SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
VVG + + A M +LA Y + +F +P SRPR F + R+ +
Sbjct: 125 VVGLVSRNGGADMNTVLATFVRLGYKVGALEIDARRF-LPQSRPRLFVVCVREDIDI 180
>gi|417936804|ref|ZP_12580110.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis X]
gi|343399246|gb|EGV11768.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis X]
Length = 406
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60
M + N E + + F+SG+GG+ + + +VV A + + A Y+LN
Sbjct: 1 MTNSVSSNRPEKYNIAAFFSGVGGIELGFEQTN-EFRVVYANEFDKYARQTYQLNHPDTY 59
Query: 61 YQG-NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
G +I ++ ++ + PCQ ++ G +K D R F ++L +I
Sbjct: 60 LDGRDIHDVQPEDIPAERVDVIMGGFPCQAFSIAGYRKGFDDDRGDLFFELLRMIEGC-- 117
Query: 120 PPHMLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
P +F+ENV VG + +T + E L ++Y + +L+ +G +P +R R + +
Sbjct: 118 KPRAIFIENVKNMVGHDHGNTFKVIREALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|420455009|ref|ZP_14953839.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
gi|393073359|gb|EJB74133.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
Length = 348
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 17/174 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y A +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SAHPHFELIWANDIDKDAILSYQAN--HKEAQTILCDIMQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG S ++ + + N+ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGL-MSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|385216117|ref|YP_005776074.1| Type II DNA modification enzyme [Helicobacter pylori F32]
gi|317180646|dbj|BAJ58432.1| Type II DNA modification enzyme [Helicobacter pylori F32]
Length = 348
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 145/384 (37%), Gaps = 51/384 (13%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIMQLD 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VVG + ++ Y+ + IL+ L +GVP R R + K SF+
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK--SFK-- 169
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
Q P P I H D+ L P++ +GD + G
Sbjct: 170 ----QKFHFPKP---------IKTHFSLKDALGDL----PPIQS----GENGDAL----G 204
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
+L +F + + + L+ + + G + D + + + +T +
Sbjct: 205 YLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKNLRPKSGYTNT 264
Query: 306 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
Y + + T + + + R + RE A L SFP +++F S ++
Sbjct: 265 YAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSASAKRL 324
Query: 366 YALLGNSLSIAVVAPLLQYLFAQA 389
+GN+ V PLL A A
Sbjct: 325 Q--IGNA-----VPPLLSVALAHA 341
>gi|302380785|ref|ZP_07269249.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna
ACS-171-V-Col3]
gi|302311385|gb|EFK93402.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna
ACS-171-V-Col3]
Length = 321
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA-----NDVYELNFGHRPYQGNIQNL 68
++LE + GIG +R + + + +VV+ +I DKA N +Y N+ + G
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEI-DKACVKSYNALYGENYKPKSVVGYKAPN 63
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLF 125
+L M+G+ PCQ ++R G ++ ++S R+ + + +I P +
Sbjct: 64 EKIDLIMHGS-------PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKDKPKWII 116
Query: 126 VENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
ENV G D+ ++ L + Y ++ IL+ + FG+P R R F ++ SF
Sbjct: 117 WENVRGVLDRNMRDSFFIYLKELESLGYESKYEILNAMDFGIPQKRERIFVVSCLGANSF 176
Query: 183 RCQLLNNQLLRSPSPLLGND 202
L + R S L D
Sbjct: 177 SFDKLERKETRPLSEFLEKD 196
>gi|307710826|ref|ZP_07647254.1| DNA-cytosine methyltransferase family protein [Streptococcus mitis
SK321]
gi|307617432|gb|EFN96604.1| DNA-cytosine methyltransferase family protein [Streptococcus mitis
SK321]
Length = 406
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60
M + N E + + F+SG+GG+ + + +VV A + + A Y+LN
Sbjct: 1 MTNSVSSNRPEKYNIAAFFSGVGGIELGFEQTN-EFRVVYANEFDKYARQTYQLNHPDTY 59
Query: 61 YQG-NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
G +I ++ ++ + PCQ ++ G +K D R F ++L +I
Sbjct: 60 LDGRDIHDVQPEDIPAERVDVIMGGFPCQAFSIAGYRKGFDDDRGDLFFELLRMIEGC-- 117
Query: 120 PPHMLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
P +F+ENV VG + +T + E L ++Y + +L+ +G +P +R R + +
Sbjct: 118 KPRAIFIENVKNMVGHDHGNTFKVIREALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|390442178|ref|ZP_10230192.1| Cytosine-specific methyltransferase [Microcystis sp. T1-4]
gi|425472072|ref|ZP_18850923.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9701]
gi|389834470|emb|CCI34318.1| Cytosine-specific methyltransferase [Microcystis sp. T1-4]
gi|389881963|emb|CCI37552.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9701]
Length = 728
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
E R ++ ++GIGG R + V V + +I++ VY NF P Q +I+ +
Sbjct: 3 NEKLRFIDLFAGIGGFRLAF--ESVGYDCVYSCEIDENCRKVYFNNFQEIPDQ-DIRKIA 59
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+L + PCQP++ G + D R F I E++ +K P ++ +ENV
Sbjct: 60 IHDLPDF--EVLTAGFPCQPFSISGKRAGFRDTRGTLFFHICEIV--ELKKPKIILLENV 115
Query: 130 VGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
D K ++I+ +S YL +L+ FGVP +R R +A +
Sbjct: 116 KHLIHLDK-GKNLDIILHSLEELGYLVDYKLLNAKDFGVPQNRERIIIIATQ 166
>gi|322376119|ref|ZP_08050628.1| DNA modification methylase [Streptococcus sp. C300]
gi|321278887|gb|EFX55931.1| DNA modification methylase [Streptococcus sp. C300]
Length = 406
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60
M + N E + + F+SG+GG+ + + +VV A + + A Y+LN
Sbjct: 1 MTNSVSSNRPEKYNIAAFFSGVGGIELGFEQTN-EFRVVYANEFDKYARQTYQLNHPDTY 59
Query: 61 YQG-NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
G +I ++ ++ + PCQ ++ G +K D R F ++L +I
Sbjct: 60 LDGRDIHDVQPEDIPAERVDVIMGGFPCQAFSIAGYRKGFDDDRGDLFFELLRMIEGC-- 117
Query: 120 PPHMLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
P +F+ENV VG + +T + E L ++Y + +L+ +G +P +R R + +
Sbjct: 118 KPRAIFIENVKNMVGHDHGNTFKVIREALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|386754006|ref|YP_006227224.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Shi112]
gi|384560264|gb|AFI00731.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Shi112]
Length = 188
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIMQLN 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFKRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|166367718|ref|YP_001659991.1| modification methylase [Microcystis aeruginosa NIES-843]
gi|166090091|dbj|BAG04799.1| modification methylase [Microcystis aeruginosa NIES-843]
Length = 159
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQG 63
D + R ++ + G+GG R ++ + ++ + V + DI+ A +Y NFG +P QG
Sbjct: 5 KDSKKIRFIDLFCGLGGFRVAIERVCRQKNLESDCVFSCDIDKDARAIYHANFGDQP-QG 63
Query: 64 NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHM 123
+I + A LD+ + PCQP++ G K D R F +I ++ K P
Sbjct: 64 DITEIAA--LDIPNHDILMAGFPCQPFSICGDLKGFEDTRGTLFFEIARIL--KAKQPAA 119
Query: 124 LFVENVVGFETSDTHAKMIEILANS 148
ENV + K +E++ ++
Sbjct: 120 FIPENVKQLQ-GHQQGKTLEVILDT 143
>gi|289167787|ref|YP_003446056.1| site-specific DNA methylase [Streptococcus mitis B6]
gi|417847802|ref|ZP_12493763.1| putative modification methylase BanI [Streptococcus mitis SK1073]
gi|418166562|ref|ZP_12803218.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA17971]
gi|421211041|ref|ZP_15668025.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae 2070035]
gi|288907354|emb|CBJ22191.1| site-specific DNA methylase [Streptococcus mitis B6]
gi|339456200|gb|EGP68793.1| putative modification methylase BanI [Streptococcus mitis SK1073]
gi|353830158|gb|EHE10288.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA17971]
gi|395573764|gb|EJG34351.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae 2070035]
Length = 346
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 151/394 (38%), Gaps = 102/394 (25%)
Query: 14 RVLEFYSGIGGMRYSLMK---------ADVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
++ +SG GG AD ++V A DI D AN ++E NFG P N
Sbjct: 5 KIASLFSGGGGTDIGFAGGFDFLGKHYADNQIEIVYANDIEDSANKMFEKNFGVTPDNRN 64
Query: 65 IQNLTAAELDMYGAHAWLLSPPCQPYT-------RQGLQKQSSDARAFSFLKILELIPHT 117
I+ + + E+ + PCQ ++ R G++ D + F +++ ++
Sbjct: 65 IREIKSDEIPSFDILTGGF--PCQSFSVSAQNPKRLGIK----DEKGTLFFEMVRVL--K 116
Query: 118 VKPPHMLFVENVVGFETSDTHAK---MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 174
P F ENV G +++ +IE + Y + ++GVP R R F +
Sbjct: 117 AHQPKAFFAENVKGILSANNKEAFPLIIEEFEKAGYNVSYKLCVATKYGVPQKRERVFIV 176
Query: 175 AKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFS 234
RK L+F + P+ +D T + K++ D E++ FS
Sbjct: 177 GIRKDLNFTFEF-------PEEPIQNVEDYTPL-----------KVILQQDIDEKYY-FS 217
Query: 235 NSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYP 294
Q G L++ + + G A++ + VS L +SL ++ D V
Sbjct: 218 ERAVQ-----GMLNSKSGKKMNKGRAQDIEQPSNTVS--SHLAKVSL-----NSTDPVLL 265
Query: 295 DSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDF 354
++ R Y RY TPREVA + SFP ++
Sbjct: 266 ENGR-------YRRY------------------------------TPREVARIQSFPENY 288
Query: 355 QFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
+ S +Y +LGN+ + P++ + A+
Sbjct: 289 ELLG--SEGAQYRMLGNA-----IPPVMMWYIAE 315
>gi|342903643|ref|ZP_08725451.1| modification methylase NgoPII [Haemophilus haemolyticus M21621]
gi|341954894|gb|EGT81363.1| modification methylase NgoPII [Haemophilus haemolyticus M21621]
Length = 336
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/372 (19%), Positives = 135/372 (36%), Gaps = 69/372 (18%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP----YQGNIQNLT 69
+V+ + G GG+ +A V +D ++E + P +G+I+N+
Sbjct: 2 KVISLFCGCGGLDLGFERAGFQVLVANEYD-----KTIWETFKANHPKTRLIEGDIRNIK 56
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFV 126
+ + PPCQ ++ G + +DAR F +++IL+ K P
Sbjct: 57 EDDFPDE-VDGIIGGPPCQSWSEAGALRGINDARGQLFFDYIRILK-----SKQPKFFLA 110
Query: 127 ENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
ENV G +D ++++ Y +++ +G+ R R F + RK L
Sbjct: 111 ENVSGMLANRHNDAVQNLLKMFDECGYDVTLTMVNAKDYGIAQERKRVFYIGFRKDLGIN 170
Query: 184 CQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTE 243
+ P +D+ + K D WD + +ER L+ + +N
Sbjct: 171 FEF--------PIGSTSSDEKKITLK----DIIWDLKDTAVPALERNLK---NPAAINNN 215
Query: 244 TGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFT 303
F+ S + + ++ W V ++C
Sbjct: 216 EYFIG----------------------SFSPIFMSRNRVKAWHEQAFTVQASGRQCQLHP 253
Query: 304 KSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLR 363
++ GT + KE+ R T REVA + FP DF+F + +L
Sbjct: 254 QAPKMEKHGTNDYRFVIG----------KEKLYRRMTVREVARIQGFPDDFKFIYK-NLN 302
Query: 364 QRYALLGNSLSI 375
Y ++GN++ +
Sbjct: 303 DAYKMIGNAVPV 314
>gi|428220506|ref|YP_007104676.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 7502]
gi|427993846|gb|AFY72541.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 7502]
Length = 341
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ 66
++ R ++ + GIGG R A +++ V + DI+ A Y+ NF G+I
Sbjct: 3 QSIRFVDLFCGIGGFRLGAEIACNQRNINPTCVFSSDIDPDAQVAYKSNFDEVTV-GDIT 61
Query: 67 NLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
++ +++ H LL+ PCQP++ G K D R F I ++ K P
Sbjct: 62 KVSTSDIP---DHDILLAGFPCQPFSICGDLKGFEDVRGTLFFDIARIL--EAKQPKAFV 116
Query: 126 VENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
+ENV G T ++++ L Y T IL+ L +G+P R R F + ++ F
Sbjct: 117 LENVKQLKGHNEGKTLQRILQTLQELGYHTDYKILNALNYGLPQKRERIFIIGFKESCHF 176
>gi|157151353|ref|YP_001449946.1| cytosine-specific methyltransferase [Streptococcus gordonii str.
Challis substr. CH1]
gi|157076147|gb|ABV10830.1| cytosine-specific methyltransferase [Streptococcus gordonii str.
Challis substr. CH1]
Length = 406
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60
M + N E + + F+SG+GG+ + + +VV A + + A Y+LN
Sbjct: 1 MTNSVSSNRPEKYNIAAFFSGVGGIELGFEQTN-EFRVVYANEFDKYARQTYQLNHPDTY 59
Query: 61 YQG-NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
G +I ++ ++ + PCQ ++ G +K D R F ++L +I
Sbjct: 60 LDGRDIHDVQPEDIPAERVDVIMGGFPCQAFSIAGYRKGFDDDRGDLFFELLRMIEGC-- 117
Query: 120 PPHMLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
P +F+ENV VG + +T + E L ++Y + +L+ +G +P +R R + +
Sbjct: 118 RPRAIFIENVKNMVGHDHGNTFKVIREALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|421882427|ref|ZP_16313698.1| DNA-cytosine methyltransferase [Helicobacter bizzozeronii CCUG
35545]
gi|375315272|emb|CCF81694.1| DNA-cytosine methyltransferase [Helicobacter bizzozeronii CCUG
35545]
Length = 313
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 17/206 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++G+GG + A V A +IN A Y LNF P G+I + +
Sbjct: 3 KFIDLFAGVGGFHAAFKDL---AHCVFASEINQDAQKTYALNFPKTPLFGDITD-PRIQT 58
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
+ PCQ ++ G Q+ D R F +I + I H + P +LF+ENV +
Sbjct: 59 QIPPFDILCAGFPCQAFSIAGYQRGFEDTRGTLFFEIAK-IAHKHR-PKVLFLENVKNLK 116
Query: 134 TSDTHAKMIEILANS----DYLTQEFIL-SPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 188
T D + E++ N+ Y+ +L S +P +R R F +A R Q+ N
Sbjct: 117 THD-RGRTFEVICNTLSDLGYVIYSAVLNSATHANIPQNRERLFIVA----FDIR-QVEN 170
Query: 189 NQLLRSPSPLLGNDDMTVITKHDQPD 214
+Q P P+ N ++ ++ Q D
Sbjct: 171 HQNFTFPKPVKPNRNIHACLQNLQQD 196
>gi|189423373|ref|YP_001950550.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ]
gi|189419632|gb|ACD94030.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ]
Length = 375
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 77/187 (41%), Gaps = 20/187 (10%)
Query: 5 MCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QG 63
M +D + V +F+ G GG KA + + A D++ A + + NF +
Sbjct: 11 MINHDKKNISVFDFFCGCGGTSRGFQKAGMD--IAFALDVDKDAKNTFTKNFPSTDFCDK 68
Query: 64 NIQNLTAAE----LDMYGAHAWLLS--PPCQPYTRQGLQKQSSDARAFSFLKILELIPHT 117
+I+ LT + LD Y L PCQP+T+Q + D R +L
Sbjct: 69 SIKKLTVLDFQHTLDKYKDSYKLFCGCAPCQPFTKQNTESPKQDERK----DLLTYFGTI 124
Query: 118 VK--PPHMLFVENVVGFETSDTHAK-----MIEILANSDYLTQEFILSPLQFGVPYSRPR 170
VK P +FVENV G + H E+L +Y +++ +G P R R
Sbjct: 125 VKECEPDFVFVENVPGLQKVPNHKHGPFPAFEELLHKLNYQIAYGVVAAQDYGAPQLRRR 184
Query: 171 YFCLAKR 177
+ LA R
Sbjct: 185 FVLLASR 191
>gi|406885095|gb|EKD32374.1| hypothetical protein ACD_77C00108G0001, partial [uncultured
bacterium]
Length = 380
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 12/193 (6%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++ ++G+GG +L + + Q V A +I+ VY+ NFG P G+++ ++ +
Sbjct: 1 MDLFAGVGGFHVAL--SHLGGQCVFASEIDPVLQAVYKENFGLTP-SGDLKLISPTSVPN 57
Query: 76 YGAHAWLLSPPCQPYTRQGLQKQ-SSDARAFSFLKILELIPHTVKPPHMLFVENV---VG 131
+ PCQP+++ G Q D + F + E+I K P +ENV +
Sbjct: 58 HDVLC--AGFPCQPFSKAGEQLGFGCDKQGDLFQYVAEII--AAKRPAFFLLENVPNLLK 113
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS-FRCQLLNNQ 190
T+ ++E L N Y E LSP FGVP R R + + + L F N
Sbjct: 114 HNNGKTYKLILEKLKNLQYDVDEHRLSPHHFGVPQIRDRVYIVGAKHGLRHFSWPEKKNH 173
Query: 191 LLRSPSPLLGNDD 203
L L GN D
Sbjct: 174 ELNICDVLEGNPD 186
>gi|194335097|ref|YP_002016957.1| DNA-cytosine methyltransferase [Prosthecochloris aestuarii DSM 271]
gi|194312915|gb|ACF47310.1| DNA-cytosine methyltransferase [Prosthecochloris aestuarii DSM 271]
Length = 340
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 137/368 (37%), Gaps = 63/368 (17%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAA--- 71
++ +SG+GG+ L KA ++ AF+I++ A+ VY+LN + +I+N++
Sbjct: 6 IDIFSGVGGLTEGLHKAGFQTEL--AFEIDELASKVYKLNHKKTKVITDDIRNISTENVK 63
Query: 72 -ELDMYGAHAWLLSPPCQPYT---RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
EL H PPCQ ++ R + D R + + + + P+ +E
Sbjct: 64 QELGNKTIHLLAGCPPCQGFSSIRRLNKPEPVKDDRNKLIKEFVRFVKELM--PYTFMME 121
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEF-ILSPLQFGVPYSRPRYFCLAKR-KPLSFRCQ 185
NV G + ++ L N+ Y ++ I++ +GVP SR R + R PL
Sbjct: 122 NVPGLALDKSFKSALKELENAGYYKPDWKIVNIKDYGVPQSRKRLVLVGSRLAPLRIAEP 181
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
+ +R VI K +P++S D L + F + D++
Sbjct: 182 TKKKKTVRQ-----------VIGKLPKPENSMDPLHQI---------FPSHSDEILNLIK 221
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
+ + D G + +C K F
Sbjct: 222 DIPKNGGSRKDLGKDRQL----KC-------------------------HQKENVGFNDV 252
Query: 306 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
Y R S T N K L + R + RE + L SFP ++FP +
Sbjct: 253 YGRLRWDDFSTTITGGCLNPSKGRFLHPEQDRCISAREASMLQSFPKTYKFPIDAPRTKI 312
Query: 366 YALLGNSL 373
++GN+L
Sbjct: 313 ALMIGNAL 320
>gi|420446856|ref|ZP_14945751.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-43]
gi|393064566|gb|EJB65401.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-43]
Length = 165
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 16/172 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y A +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SAHPHFELIWANDIDKDAILSYQAN--HKEAQTILCDIMQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
VVG + ++ Y+ + IL+ L +GVP R R L++R
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVI-LSRR 164
>gi|256821199|ref|YP_003142398.1| DNA-cytosine methyltransferase [Anaerococcus prevotii DSM 20548]
gi|256799179|gb|ACV29833.1| DNA-cytosine methyltransferase [Anaerococcus prevotii DSM 20548]
Length = 321
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 17/196 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA--- 70
++LE + GIG +R + + + +VV+ +I+ Y +G ++ A
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEIDKACVKSYNALYGEEYKAKSVVGYKAPNE 64
Query: 71 -AELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLFV 126
+L M+G+ PCQ ++R G ++ ++S R+ + + +I P +
Sbjct: 65 KIDLIMHGS-------PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEIKDKPKWIIW 117
Query: 127 ENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
ENV G D+ ++ L N Y ++ IL+ + FG+P R R F +++ +F
Sbjct: 118 ENVKGVLDRNMRDSFFIYLKELENLGYKSKYEILNAMDFGIPQKRERIFVVSQFGENNFS 177
Query: 184 CQLLNNQLLRSPSPLL 199
L + R S L
Sbjct: 178 FNKLERKETRPLSEFL 193
>gi|420418415|ref|ZP_14917507.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393033241|gb|EJB34304.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 189
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 17/174 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y A +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGTGGLSYGF-SAQPYFELIWANDIDKDAILSYQAN--HKEAQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG S ++ + + N+ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGL-MSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|168335325|ref|ZP_02693422.1| DNA-cytosine methyltransferase [Epulopiscium sp. 'N.t. morphotype
B']
Length = 324
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 145/379 (38%), Gaps = 63/379 (16%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
R++ ++G GG+ KA +D A YE N +G+I + +A+
Sbjct: 2 RLISLFAGAGGLDLGFEKAGYEIAAANEYDKTIWA--TYEKNHKGPLIKGDISKIPSADF 59
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
G + PPCQ ++ G + D R F + + ++ K P ENV G
Sbjct: 60 PD-GIDGIIGGPPCQSWSAAGRLRGIEDPRGRLFYEYIRILKD--KKPKFFLAENVKGMM 116
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQ---FGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 190
+ + I++ + + + + L +GV R R F + RK L+ + + Q
Sbjct: 117 AQRHNEAVKGIVSQFEEVGYDVFIKLLNANDYGVAQDRKRVFYIGFRKDLNIKFEFPKPQ 176
Query: 191 LLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 250
+ P+L D WD + +++ ++ N FLS
Sbjct: 177 EYK---PVL-------------RDILWDLKDNAVPALDK--------NKKNASVKFLSH- 211
Query: 251 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 310
+ F A T+ + R + + +W V ++C ++
Sbjct: 212 ----EYFTGAFSTMFMSR-----------NRVRQWDEPGFTVQASGRQCQLHPQA----- 251
Query: 311 KGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLG 370
+ V+ KNK + +E R + REVA + FP DF+F + S+ Y ++G
Sbjct: 252 ----PKMPKVE-KNKNVFAEGQEHLYRRLSVREVARVQGFPDDFEF-IYTSVDTGYKMIG 305
Query: 371 NS----LSIAVVAPLLQYL 385
N+ L+ AV + +Y+
Sbjct: 306 NAVPVGLAYAVAEQIKKYI 324
>gi|427400236|ref|ZP_18891474.1| DNA (cytosine-5-)-methyltransferase [Massilia timonae CCUG 45783]
gi|425720976|gb|EKU83891.1| DNA (cytosine-5-)-methyltransferase [Massilia timonae CCUG 45783]
Length = 328
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 153/392 (39%), Gaps = 93/392 (23%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLT----A 70
++ + G GG+ L A +V FD +A Y+ NF +QG+++++
Sbjct: 7 VDLFCGAGGLSLGLELAGWKTKVAADFDA--QACATYKRNFPDTDVHQGDVRSVDWTRLR 64
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP-----PHMLF 125
++D+ PPCQP++ G QK + D R +++P V+ P ++
Sbjct: 65 GKIDLVAG-----GPPCQPFSVAGNQKAADDIR--------DMLPEFVRAVAEIRPKLVL 111
Query: 126 VENVVGFETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSF 182
+ENV G +S + E LA L E +L+ QFGVP R R +
Sbjct: 112 MENVAGLASSRHETYLNEKLAIISELGYEVEFKVLNSAQFGVPQERNRVIVIG------- 164
Query: 183 RCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCD--PVERFLEFSNSGD-Q 239
++ + + PSP G TK + + +L + P + ++ S +
Sbjct: 165 ----VDRSIPKFPSPTHG-------TKQRPYKSAREAILNAPADVPNSAIVTYAKSPILR 213
Query: 240 VNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRC 299
+ G L G + A +T+ + H +++ G ++
Sbjct: 214 PSPWAGMLVNGGGRPINLDAPSQTIPASAGGNRTH------IVDETGILLN--------- 258
Query: 300 CCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQF--P 357
Y+ ++ G++ + + + +R T +E A L SFP DF+F P
Sbjct: 259 ------YHSHLLSGGNVKSGIV------------EGVRRLTVKESAALQSFPSDFEFLGP 300
Query: 358 HHLSLRQRYALLGNSLSIAVVAPLLQYLFAQA 389
RQ +GN+ V PLL + +A
Sbjct: 301 RSAQYRQ----IGNA-----VPPLLAHAVGKA 323
>gi|254779148|ref|YP_003057253.1| type II cytosine specific DNA methyltransferase [Helicobacter
pylori B38]
gi|254001059|emb|CAX29005.1| M. Hpy99XI, type II cytosine specific DNA methyltransferase
[Helicobacter pylori B38]
Length = 348
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 142/384 (36%), Gaps = 51/384 (13%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHSHFELIWANDIDKDAILSYQAN--HKEVQTILCDIVQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPRVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGVLKRF----- 168
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
Q P P I H D+ L P++ +GD + G
Sbjct: 169 ---KQKFHFPKP---------IKTHFSLKDA----LGDLPPIQS----GENGDAL----G 204
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
+L +F + + + L+ + + G + D + + +T +
Sbjct: 205 YLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPESLRPKSGYTNT 264
Query: 306 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
Y + + T + + + R + RE A L SFP D++F S ++
Sbjct: 265 YAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDDYKFCGSASAKR- 323
Query: 366 YALLGNSLSIAVVAPLLQYLFAQA 389
+GN+ V PLL AQA
Sbjct: 324 -LQIGNA-----VPPLLSVALAQA 341
>gi|207092664|ref|ZP_03240451.1| type II DNA modification enzyme [Helicobacter pylori
HPKX_438_AG0C1]
gi|207108938|ref|ZP_03243100.1| type II DNA modification enzyme [Helicobacter pylori
HPKX_438_CA4C1]
Length = 160
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ---GNIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-STHPHFELIWANDIDKDAILSYQAN--HKEVQIILCDIVQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L VKP +F EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDL----VKPKIFVF-EN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYF 172
VVG S ++ + + N+ Y+ + IL+ L +GVP R R F
Sbjct: 114 VVGL-MSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVF 160
>gi|385249008|ref|YP_005777227.1| Type II DNA modification enzyme [Helicobacter pylori F57]
gi|317181803|dbj|BAJ59587.1| Type II DNA modification enzyme [Helicobacter pylori F57]
Length = 351
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 145/384 (37%), Gaps = 51/384 (13%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPYFELIWANDIDKDAILSYQAN--HKKTQTILCDIMQLN 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VVG + ++ Y+ + IL+ L +GVP R R + K SF+
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGVLK--SFK-- 169
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
Q P P I H D+ L P++ +GD + G
Sbjct: 170 ----QKFHFPKP---------IKTHFSLKDALGDL----PPIQS----GENGDAL----G 204
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
+L +F + + + L+ + + G + D + + + +T +
Sbjct: 205 YLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKNLRPKSGYTNT 264
Query: 306 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
Y + + T + + + R + RE A L SFP +++F S ++
Sbjct: 265 YAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSASAKRL 324
Query: 366 YALLGNSLSIAVVAPLLQYLFAQA 389
+GN+ V PLL A A
Sbjct: 325 Q--IGNA-----VPPLLSAALAHA 341
>gi|256544753|ref|ZP_05472125.1| type II restriction-modification system methylation subunit
[Anaerococcus vaginalis ATCC 51170]
gi|256399642|gb|EEU13247.1| type II restriction-modification system methylation subunit
[Anaerococcus vaginalis ATCC 51170]
Length = 320
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA-----NDVYELNFGHRPYQGNIQNL 68
++LE + GIG +R + + + +VV+ +I DKA N +Y ++ + G
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEI-DKACVKSYNALYGEDYKPKSVVGYKAPN 63
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLF 125
+L M+G+ PCQ ++R G ++ ++S R+ + + +I + P +
Sbjct: 64 EKIDLIMHGS-------PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKEKPKWII 116
Query: 126 VENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
ENV G D+ ++ L N Y ++ IL+ + FG+P R R F ++ +F
Sbjct: 117 WENVKGVLDRNMRDSFFIYLKELENLGYESKYEILNAMDFGIPQKRERIFVVSCLGANNF 176
Query: 183 RCQLLNNQLLRSPSPLLGND 202
L + R S L D
Sbjct: 177 SFNKLERKETRPLSDFLEKD 196
>gi|379730544|ref|YP_005322740.1| DNA-cytosine methyltransferase [Saprospira grandis str. Lewin]
gi|378576155|gb|AFC25156.1| DNA-cytosine methyltransferase [Saprospira grandis str. Lewin]
Length = 418
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 32/205 (15%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY----QGNIQNL 68
++ ++ ++GIGG R +L + + V + + + +A Y NFG P+ + ++++
Sbjct: 89 FKFIDLFAGIGGFRLALQ--SLGGECVFSSEWDKQAQKTYYTNFGEYPFGDITKESVKSQ 146
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
+ D+ A PCQ ++ G + D R F + E+I K P +F+EN
Sbjct: 147 IPDDFDILCAGF-----PCQAFSIAGKRGGFEDTRGTLFFDVAEIIRR--KKPKAIFLEN 199
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPL 180
V G D + IL L ++ +++ FGVP +R R F +
Sbjct: 200 VKGLRNHDKGKTLSTIL---HVLREDLGYSVPDPQVVNARDFGVPQNRERIFIVG----- 251
Query: 181 SFRCQLLNNQLLRSPSPLLGNDDMT 205
FR + N P L N+++T
Sbjct: 252 -FREDIANEVAFEYPKAL--NEEVT 273
>gi|148658198|ref|YP_001278403.1| DNA-cytosine methyltransferase [Roseiflexus sp. RS-1]
gi|148570308|gb|ABQ92453.1| DNA-cytosine methyltransferase [Roseiflexus sp. RS-1]
Length = 395
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 17 EFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ--GNIQNLTAAELD 74
EF++G G R+ L + + A DI++K +VY+ NF P +I+++T A L
Sbjct: 8 EFFAGGGLARFGLGR---QWTCLFANDIDEKKAEVYQRNFSGAPEMVVEDIRHITTAMLP 64
Query: 75 MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH---MLFVENVVG 131
AW S PCQ + G R+ +F LI + ++ +ENVVG
Sbjct: 65 GRATLAW-ASFPCQDLSLAGKGGGLRAERSGTFWPFWNLITALNREGRGVPIIAIENVVG 123
Query: 132 FETSDT---HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
TS+ ++I ++ Y ++ + F VP SRPR F +A + L
Sbjct: 124 LLTSNNGHDFQELITVITTEGYRLGAMVVDAVHF-VPQSRPRLFIIAVKDHL 174
>gi|167751358|ref|ZP_02423485.1| hypothetical protein EUBSIR_02344 [Eubacterium siraeum DSM 15702]
gi|167655604|gb|EDR99733.1| DNA (cytosine-5-)-methyltransferase [Eubacterium siraeum DSM 15702]
Length = 316
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 70/168 (41%), Gaps = 24/168 (14%)
Query: 19 YSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGA 78
++GIGG+ +A A + A DIN A Y NF N+ E D+
Sbjct: 7 FAGIGGIDLGFEQAGFRA--IWANDINKNACKTYRYNF---------PNVNLYECDIRSL 55
Query: 79 HAWLLSP--------PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+L P PCQP++ G +K +D R F +I+ ++PP ++F ENV
Sbjct: 56 DPSILQPVDVLTAGFPCQPFSVCGQKKGFADERGNLFFEIMRF-ADVLQPP-IIFFENVA 113
Query: 131 GFETSDTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
D I L + DY + I +G+P R R + +A
Sbjct: 114 NLTEHDNGRTFNVIHNELVSRDYAIRYLIADACDYGIPQHRTRTYIVA 161
>gi|16923911|gb|AAL31632.1|AF438204_2 C5 DNA methyltransferase [Positive selection vector pMTet1]
Length = 418
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ +SGIGG+R S + V + +I+ A Y NFG P+ ++T E
Sbjct: 105 FKFIDLFSGIGGIRQSFEVN--GGKCVFSSEIDPFAKFTYYTNFGVVPFG----DITKVE 158
Query: 73 LDMYGAHAWLLSP-PCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
H L + P QP++ R+G + + ++I+E T K P +LF+E
Sbjct: 159 ATTIPEHDILCAGFPGQPWSHMGKREGFEHPTQGTMFHEIVRIIE----TKKTP-VLFLE 213
Query: 128 NVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
NV G D T +IE L + Y +L FG+P R R++ +A
Sbjct: 214 NVPGLINHDDGNTLKVIIETLEDMGYKVHHTVLDASHFGIPQKRKRFYLVA 264
>gi|420497419|ref|ZP_14995979.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25]
gi|420527743|ref|ZP_15026137.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25c]
gi|420530274|ref|ZP_15028658.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25d]
gi|393113698|gb|EJC14216.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25]
gi|393134869|gb|EJC35278.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25c]
gi|393135477|gb|EJC35873.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25d]
Length = 160
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 17/168 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-STHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L+ P + EN
Sbjct: 59 CHNLPRVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFEN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYF 172
VVG S ++ + + N+ Y+ + IL+ L +GVP R R F
Sbjct: 114 VVGL-ISMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVF 160
>gi|376006902|ref|ZP_09784110.1| Modification methylase HindV [Arthrospira sp. PCC 8005]
gi|375324711|emb|CCE19863.1| Modification methylase HindV [Arthrospira sp. PCC 8005]
Length = 314
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 12/167 (7%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE- 72
R ++ ++G GG+ SL + + AF+I A VY+ NF H +Q ++ +
Sbjct: 2 RTIDLFAGCGGL--SLGFENAGFDIKAAFEIWQPAIKVYQRNFRHPIFQVDLSEESVIHT 59
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENV 129
L + PPCQ ++ G ++ S RA +F +I+ I P +ENV
Sbjct: 60 LRECKPEVIIGGPPCQDFSSAG-KRDESLGRANLTINFARIIASIK-----PRFFMMENV 113
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
S T +IL NS Y +L GVP +R RYF + +
Sbjct: 114 SRITKSQTLKVTWQILKNSGYGLTGSVLDASYCGVPQARKRYFLIGE 160
>gi|420413430|ref|ZP_14912554.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393029417|gb|EJB30498.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
Length = 351
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 17/174 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y A +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SAQPYFELIWANDIDKDAILSYQAN--HKEAQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG S ++ + + N+ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGL-MSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|2760954|gb|AAB95336.1| EaeI methyltransferase alpha subunit [Enterobacter aerogenes]
Length = 309
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 75/176 (42%), Gaps = 11/176 (6%)
Query: 5 MCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
M K + ++V F++GIGG L KA + +VV +IN V N+ + P +
Sbjct: 1 MKKKPLKQYKVSSFFAGIGGFDLGLEKAGM--EVVFQCEINKFCQKVLRKNWPNVPLHTD 58
Query: 65 IQNLTAAELDMYGAHAWLLSPPCQPYT--RQGLQKQSSDARAFSFLKILELIPHTVKPPH 122
I L A E+ + W PCQ + QG +K AR+ F +LI + P
Sbjct: 59 ITQLNADEIPE--SSVWCGGFPCQDVSSANQGKRKGLEGARSGLFYTYAKLIEE--RKPE 114
Query: 123 MLFVENVVGFETSDTHAK---MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
L +ENV G S +I+ L Y +L FG P R R + +A
Sbjct: 115 WLVIENVPGLLNSHNGQDFKVVIDTLVELGYGVSWRVLDAKYFGTPQRRRRVYIVA 170
>gi|422855126|ref|ZP_16901784.1| modification methylase ScrFIA [Streptococcus sanguinis SK1]
gi|327463103|gb|EGF09424.1| modification methylase ScrFIA [Streptococcus sanguinis SK1]
Length = 346
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 27/188 (14%)
Query: 14 RVLEFYSGIGGMRYSLMK---------ADVSAQVVEAFDINDKANDVYELNFGHRPYQGN 64
++ +SG GG AD ++V A DI+D AN ++E NFG P N
Sbjct: 5 KIASLFSGGGGTDIGFAGGFDFLDQHYADNQIEIVYANDIDDSANKMFEKNFGITPDNRN 64
Query: 65 IQNLTAAELDMYGAHAWLLSPPCQPYT-------RQGLQKQSSDARAFSFLKILELIPHT 117
++ + + E+ + PCQ ++ R G++ D + F +++ ++
Sbjct: 65 VREVKSNEIPSFDILTGGF--PCQSFSVSAQNPKRLGIK----DEKGTLFFEMVRVL--K 116
Query: 118 VKPPHMLFVENVVGFETSDTHAK---MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 174
P F ENV G +++ +IE + Y + ++GVP R R F +
Sbjct: 117 AHQPKAFFAENVKGILSANNKEAFPLIIEEFEKAGYNVSYKLCVATKYGVPQKRERVFIV 176
Query: 175 AKRKPLSF 182
RK L+F
Sbjct: 177 GIRKDLNF 184
>gi|386748038|ref|YP_006221246.1| DNA-cytosine methyltransferase [Helicobacter cetorum MIT 99-5656]
gi|384554280|gb|AFI06036.1| DNA-cytosine methyltransferase [Helicobacter cetorum MIT 99-5656]
Length = 437
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 14 RVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
R ++ ++G+GG+R +A + ++ V + +I A Y +F P QG+I +
Sbjct: 30 RFMDLFAGLGGLRLGFEQALSSIGLKSECVLSSEIKKSALKAYANHFKEIP-QGDITKID 88
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ + L PCQP++ G ++ D R F +I+ + K P +ENV
Sbjct: 89 TNNIPNF--DILLAGFPCQPFSSAGKRRGLEDTRGTLFFEIMRFL--LTKKPKGFLLENV 144
Query: 130 VGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
G T D T + M+ L + +L+ FGV +R R + +
Sbjct: 145 PGLLTHDKGKTFSIMLHHLEECGHFVNYKLLNAKDFGVAQNRERLYIVG 193
>gi|363897130|ref|ZP_09323670.1| hypothetical protein HMPREF9624_00232 [Oribacterium sp. ACB7]
gi|361959228|gb|EHL12521.1| hypothetical protein HMPREF9624_00232 [Oribacterium sp. ACB7]
Length = 414
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 12/172 (6%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
V E ++GIG R +L+ ++ ++V +I+ A YE +G G+I + LD
Sbjct: 6 VNELFAGIGAFRKALINQNIPHEIVGISEIDKYAIKSYEAMYGETRNYGDISKI--ERLD 63
Query: 75 MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFL-----KILELIPHTVKPPHMLFVENV 129
A W PCQ + G K S L ++LE+ P L +ENV
Sbjct: 64 Y--ADLWTYGFPCQDISLAGDMKGIVKGETRSGLLHEVERLLEVAKEEGTLPKFLIMENV 121
Query: 130 VGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
+ + I+ L++ Y T+ +L +G+P R R F ++ RK
Sbjct: 122 KNLVSKKFIGDFQRWIDKLSDLGYTTEWKVLIASDYGIPQRRERVFAVSVRK 173
>gi|319639602|ref|ZP_07994349.1| cytosine-specific methyltransferase [Neisseria mucosa C102]
gi|317399173|gb|EFV79847.1| cytosine-specific methyltransferase [Neisseria mucosa C102]
Length = 327
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 37 QVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQ 96
++V A D + A Y NF H +I+NL ELD + L PCQ ++
Sbjct: 38 EIVYALDFDKFAVQTYNANFEHPAICDDIKNLNIQELDDFD--LLLGGFPCQSFSTVNPS 95
Query: 97 KQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILA---NSDYLTQ 153
K ++DARA + ++++++ T +P + +F ENV G T + ++L + Y Q
Sbjct: 96 KDTNDARANLYKELVKVL-QTKQPKYFIF-ENVKGLMTLQKGKILQKVLTEFKQAGYEVQ 153
Query: 154 EFILSPLQFGVPYSRPRYFCLAKRK 178
+L FG+P R R F + RK
Sbjct: 154 YKLLLAANFGIPQKRERVFMVGVRK 178
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 337 RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQA 389
R FTPRE A + SFP FQFP +S Q Y +GN+ + P+L + A A
Sbjct: 277 RRFTPREAAGIQSFPDTFQFP--VSDIQAYRQIGNA-----IPPVLMWHVANA 322
>gi|313890914|ref|ZP_07824537.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pseudoporcinus
SPIN 20026]
gi|313120711|gb|EFR43827.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pseudoporcinus
SPIN 20026]
Length = 316
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA-----NDVYELNFGHRPYQGNIQNL 68
++LE + GIG +R + + + +VV+ +I DKA N +Y ++ + G
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEI-DKACVKSYNALYGESYKPKSVVGYKAPN 63
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLF 125
+L M+G+ PCQ ++R G ++ ++S R+ + + +I + P +
Sbjct: 64 EKIDLIMHGS-------PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKEKPKWII 116
Query: 126 VENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
ENV G D+ ++ L N Y ++ IL+ + FG+P R R F ++ +F
Sbjct: 117 WENVKGVLDRNMRDSFFIYLKELENLGYESKYEILNAMDFGIPQKRERIFVVSCLGANNF 176
Query: 183 RCQLLNNQLLRSPSPLLGND 202
L + R S L D
Sbjct: 177 SFNKLERKETRPLSDFLEKD 196
>gi|334335721|ref|YP_004540873.1| DNA-cytosine methyltransferase [Isoptericola variabilis 225]
gi|334106089|gb|AEG42979.1| DNA-cytosine methyltransferase [Isoptericola variabilis 225]
Length = 494
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY----QGNIQNLT 69
R ++ ++GIGG ++++ A + + V A +I+ +A VYE N+G +G+I T
Sbjct: 7 RYVDLFAGIGGF-HAVLDA-MGGECVYAVEIDAEARRVYEANWGLSARGNNDKGDITLDT 64
Query: 70 AAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
+ + H L++ PCQP+++ G QK +AR F I+ ++ + P ++ +EN
Sbjct: 65 SGDEVNVPEHDVLVAGFPCQPFSKSGAQKGMEEARGTLFFDIMRVVED--RRPSIVLLEN 122
Query: 129 V---VGFETSDTHAKMIEILANSDYLT--QEFILSPLQF-----GVPYSRPRYFCLAKRK 178
V G +I+ L + Y + I SP G P +R R F A R
Sbjct: 123 VRNLAGPRHIHEWEVIIKTLRQAGYRVSHKAAIFSPAMIAPEFGGHPQTRERVFIAATRI 182
Query: 179 PLSFRCQLLNNQ----LLRSPSPL 198
R + + L+ PSP
Sbjct: 183 NPEHRSDVYRQRRAAGTLKLPSPF 206
>gi|212710423|ref|ZP_03318551.1| hypothetical protein PROVALCAL_01485 [Providencia alcalifaciens DSM
30120]
gi|212686843|gb|EEB46371.1| hypothetical protein PROVALCAL_01485 [Providencia alcalifaciens DSM
30120]
Length = 330
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 16/175 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLTAAE 72
R++ F++G GG+ +A + FD + A Y+ N H Q +I N+T+ E
Sbjct: 4 RIVSFFAGAGGLDLGFEQAGFNVIWANEFDKDIWA--TYKKNHPHTELDQRSITNITSDE 61
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENV 129
+ + PPCQ ++ G Q+ +D R F F++ILE K P ENV
Sbjct: 62 VPE--CDGIIGGPPCQSWSEAGAQRGINDKRGQLFFDFIRILE-----AKKPKFFLAENV 114
Query: 130 VGFETS---DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
G E + D + ++ ++ Y +L+ + +GV R R + R L+
Sbjct: 115 SGMEHARHKDALDNIKKMFKDAGYDLYYKMLNAVDYGVAQDRKRVIFVGFRSDLN 169
>gi|425461547|ref|ZP_18841025.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9808]
gi|389825583|emb|CCI24535.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9808]
Length = 728
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
E R ++ ++GIGG R + V V + +I++ VY NF P Q +I+ +
Sbjct: 3 NEKLRFIDLFAGIGGFRLAF--ESVGYDCVYSCEIDENCRKVYFNNFQEIPDQ-DIRKIA 59
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+L + PCQP++ G + D R F I E++ +K P ++ +ENV
Sbjct: 60 IHDLPDF--EVLTAGFPCQPFSISGKRAGFRDTRGTLFFHICEIV--ELKKPKIILLENV 115
Query: 130 VGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
D K ++I+ S YL +L+ FGVP +R R +A +
Sbjct: 116 KHLIHLDK-GKNLDIILRSLEELGYLVDYKLLNAKDFGVPQNRERIIIIATQ 166
>gi|420440236|ref|ZP_14939193.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-30]
gi|393056884|gb|EJB57793.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-30]
Length = 351
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y A +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SAHPHFELIWANDIDKDAILSYQAN--HKEAQTILCDIMQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNTLDYGVPQIRERVILVGALK 166
>gi|420482042|ref|ZP_14980679.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2]
gi|420512466|ref|ZP_15010949.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2b]
gi|393099276|gb|EJB99857.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2]
gi|393157529|gb|EJC57790.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2b]
Length = 351
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y A +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SAHPHFELIWANDIDKDAILSYQAN--HKEAQTILCDIAQLN 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFEN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPR 170
VVG S ++ + + N+ Y+ + IL+ L +GVP R R
Sbjct: 114 VVGL-MSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRER 158
>gi|417925342|ref|ZP_12568766.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna
SY403409CC001050417]
gi|341591741|gb|EGS34846.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna
SY403409CC001050417]
Length = 321
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA-----NDVYELNFGHRPYQGNIQNL 68
++LE + GIG +R + + + +VV+ +I DKA N +Y ++ + G
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEI-DKACVKSYNALYGESYKAKSVVGYKAPN 63
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLF 125
+L M+G+ PCQ ++R G ++ ++S R+ + + +I P +
Sbjct: 64 EKIDLIMHGS-------PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKDKPKWII 116
Query: 126 VENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
ENV G D+ ++ L N Y ++ IL+ + FG+P R R F ++ +F
Sbjct: 117 WENVKGVLDRNMRDSFFIYLKELENLGYESKYEILNAMDFGIPQKRERIFVVSCFGANNF 176
Query: 183 RCQLLNNQLLRSPSPLLGND 202
L + R S L D
Sbjct: 177 SFNKLERKETRPLSEFLEKD 196
>gi|258406639|ref|YP_003199380.1| transcriptional regulator, XRE family [Desulfohalobium retbaense
DSM 5692]
gi|257798866|gb|ACV69802.1| transcriptional regulator, XRE family [Desulfohalobium retbaense
DSM 5692]
Length = 468
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 151/403 (37%), Gaps = 68/403 (16%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR- 59
+EK GEA + +SG GG +SL + V +++ +Y LNF +
Sbjct: 105 IEKKHANPKGEALNAISLFSGCGG--FSLGFSAAGFNVRGFLELDPGLRKIYRLNFPNSF 162
Query: 60 PYQGNIQNLTAAELDMYGA-----HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELI 114
G+I + A++ Y + + PPCQ ++ G ++ +D R F L +
Sbjct: 163 EMGGDITQIQDAKIKNYKSLIGDIDVIIGGPPCQGFSLSG-KRDVNDPRNTLFKHYLRFV 221
Query: 115 PHTVKPPHMLFVENVVGFET-SDTHAKMIEILANSD-----YLTQEFILSPLQFGVPYSR 168
P + +ENV + ++ +++ SD Y Q F ++ +GVP R
Sbjct: 222 --DAFRPKIAIMENVRLLSSMKNSEGNLVKCDIESDFHNHGYNVQSFEINAKDYGVPQHR 279
Query: 169 PRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVE 228
R +A R LS + + P P G + LL + P
Sbjct: 280 ERIIFVAVRNDLSIKSSI--------PDPKFG---------------YVEDLLSNKIPYR 316
Query: 229 RFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSA 288
F GD ++ FL +G D F AA H + L + SA
Sbjct: 317 TF------GDAC-SDLEFLESGEKGSDVFHAA--------VRHPSHVIEWLWDVPEGKSA 361
Query: 289 MDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQH---LRYFTPREVA 345
D P + + +Y R + + +TVQ G S + H R T RE A
Sbjct: 362 HDNEDPKLRPPSGYNTTYKRQIWDEPA--STVQ-TTFGMISGCRNVHPIATRSLTIREAA 418
Query: 346 NLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
+ SFP F+ L + + +GN+ V PLL Y +
Sbjct: 419 RIQSFPDSFKLVGRLGIIR--TGIGNA-----VPPLLAYELGE 454
>gi|443654401|ref|ZP_21131323.1| putative potein [Microcystis aeruginosa DIANCHI905]
gi|159027646|emb|CAO89510.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443333793|gb|ELS48333.1| putative potein [Microcystis aeruginosa DIANCHI905]
Length = 728
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
E R ++ ++GIGG R + V V + +I++ VY NF P Q +I+ +
Sbjct: 3 NEKLRFIDLFAGIGGFRLAF--ESVGYDCVYSCEIDENCRKVYFNNFQEIPDQ-DIRKIA 59
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+L + PCQP++ G + D R F I E++ +K P ++ +ENV
Sbjct: 60 IHDLPDF--EVLTAGFPCQPFSISGKRAGFRDTRGTLFFHICEIV--ELKKPKIILLENV 115
Query: 130 VGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
D K ++I+ S YL +L+ FGVP +R R +A +
Sbjct: 116 KHLIHLDK-GKNLDIILRSLEELGYLVDYKLLNAKDFGVPQNRERIIIIATQ 166
>gi|434397563|ref|YP_007131567.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
gi|428268660|gb|AFZ34601.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
Length = 339
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
+ + ++ ++GIGGMR +L K + A V + + + A Y+ NFG P+ G+I +T
Sbjct: 28 SLKFIDLFAGIGGMRIALEK--IGASCVFSSEWDKYAQKTYQANFGEVPH-GDITKITTE 84
Query: 72 ELDMYGAHAWLLSPPCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+ + + PCQP++ R+G Q + + ++IL K P +E
Sbjct: 85 IIPDFD--ILVAGFPCQPFSSIGKREGFQHPTQGTLFYEIIRIL-----IAKQPIAFLLE 137
Query: 128 NVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPR-YFCLAKRKPLSFR 183
NV G D T +I+ L + +Y +L +GVP R R YF R ++
Sbjct: 138 NVEGLIYHDKKKTLETIIKSLNDLNYDVFYQVLDAAHYGVPQHRKRVYFVGFNR---NYS 194
Query: 184 CQLLN 188
Q +N
Sbjct: 195 AQTIN 199
>gi|374598198|ref|ZP_09671200.1| DNA-cytosine methyltransferase [Myroides odoratus DSM 2801]
gi|423326546|ref|ZP_17304362.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CIP
103059]
gi|373909668|gb|EHQ41517.1| DNA-cytosine methyltransferase [Myroides odoratus DSM 2801]
gi|404603010|gb|EKB02690.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CIP
103059]
Length = 423
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 162/448 (36%), Gaps = 122/448 (27%)
Query: 19 YSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR--------PY--------- 61
+SG+G +L++ +V + V A D++ A + LN+G PY
Sbjct: 10 FSGVGAFDQALLRLEVDYESVFACDMDSNARHSFILNYGTEKDLELLTHPYVIFCNKMYG 69
Query: 62 ----QGNIQNLT-------------------------------AAELDMYGAHAWLLSPP 86
GN + T +A LD+Y + SPP
Sbjct: 70 SFSKHGNFKKQTYSDVKKLARIQDEAARLFSFYYPWNVKYRKESAPLDIY-----MTSPP 124
Query: 87 CQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMIE 143
CQ ++ G +K D R F E I KP + +F ENV G + D T + I+
Sbjct: 125 CQAFSLAGKRKGEEDKRGVLFYNSHEFIQKN-KPRYFIF-ENVKGLLSDDGGKTFQRWID 182
Query: 144 ILANSD---------------YLTQEFILSPLQFGVPYSRPRYFCLAKR----KPLSFRC 184
L Y +L+ +GVP +R R F + R SF
Sbjct: 183 FLGGKSVNGNPVIFPHEESVPYHIYYKVLNAKNYGVPQNRERIFIVGIRDDQDNNFSFPV 242
Query: 185 QLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTET 244
++ +L + +L D +K S ++ F+ + Q
Sbjct: 243 EI---ELKKRLKDIL-------------ETDVDEKYFLSDKLIDFFISHTEKHKQKGNGF 286
Query: 245 GFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLS-------LIERWGSAMDIVYPDSK 297
F ++ + VD D+++ S + E +++ +P+S+
Sbjct: 287 SFKPKDIESIGQAVTTKAGTRVD-----DNYIYVKSANSKGYEIAEEEEDSINFEHPNSE 341
Query: 298 RCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFP 357
R KG L T N+G S+L +R TPRE L FP F++
Sbjct: 342 TRRG------RVGKGVAQTLTT--SCNQGIYSNL---MIRKLTPRECFRLMDFPDSFKW- 389
Query: 358 HHLSLRQRYALLGNSLSIAVVAPLLQYL 385
++S Q Y GNS+ +AV+A ++Q L
Sbjct: 390 -NVSDSQAYKQAGNSIVVAVLAAIIQKL 416
>gi|419881089|ref|ZP_14402439.1| putative DNA methylase [Escherichia coli O111:H11 str. CVM9545]
gi|421776835|ref|ZP_16213437.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli AD30]
gi|432850040|ref|ZP_20081021.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE144]
gi|388366340|gb|EIL30076.1| putative DNA methylase [Escherichia coli O111:H11 str. CVM9545]
gi|408458217|gb|EKJ82006.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli AD30]
gi|431400932|gb|ELG84290.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE144]
Length = 346
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 15/175 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGN----IQNLT 69
+V +F+SG GG +A + +V D + A + NF + + I N
Sbjct: 5 KVFDFFSGCGGTSQGFHQAGM--DIVFGLDFDVDAASSFRANFPQAAFINSDIRLIDNNA 62
Query: 70 AAELDMYGAHAWLL---SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
+L + ++L PCQPY++Q K++ D R + + H + P +FV
Sbjct: 63 INKLVKKHRNDYILFSGCAPCQPYSKQNSNKKNDDPRLDLLKEFSRFVEHYM--PDFIFV 120
Query: 127 ENVVGFE----TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
ENV G + T +E+L++ Y ++ +GVP +R R +A +
Sbjct: 121 ENVPGMQKFNKNEGTFMMFLEMLSSKGYSVDYKVMPAAWYGVPQTRERLVLIASK 175
>gi|365960575|ref|YP_004942142.1| DNA-cytosine methyltransferase [Flavobacterium columnare ATCC
49512]
gi|365737256|gb|AEW86349.1| DNA-cytosine methyltransferase [Flavobacterium columnare ATCC
49512]
Length = 343
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 20/180 (11%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLTAAE 72
+++ F++G GG+ KA + V+ A + + + + YE N H + +I N+ A E
Sbjct: 2 KIVSFFAGAGGLDLGFQKAGFN--VIWANEYDKEIWETYEKNHPHTKLDRRSIVNIPADE 59
Query: 73 L-DMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVEN 128
+ D G + PPCQ ++ G K +D R F F++ILE K P EN
Sbjct: 60 VPDCDGI---IGGPPCQSWSEAGALKGINDKRGQLFFDFIRILE-----AKQPKFFLAEN 111
Query: 129 VVGF---ETSDTHAKMIEILANS--DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
V G S+ + E+ N+ Y +L+ + VP R R F + RK L F+
Sbjct: 112 VSGMLLGRHSEALKNIQELFRNAGIGYELSFEMLNASDYDVPQDRKRVFFIGIRKDLKFK 171
>gi|291549830|emb|CBL26092.1| DNA-methyltransferase (dcm) [Ruminococcus torques L2-14]
Length = 410
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
A+ +E ++G GG+ + KA + FD D A + R +I N++
Sbjct: 76 AFTTIELFAGAGGLALGIEKAGFETLGLVEFD-KDAAESLKTNRPNWRVIHDDIANISCM 134
Query: 72 ELDMY----GAHAWLLS--PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
+L+ Y LLS PCQ ++ G + DAR F + ++P LF
Sbjct: 135 DLEEYFGIKKGELDLLSGGAPCQAFSYAGKRLGLEDARGTLFYH-YAIFLQKLQPKIFLF 193
Query: 126 VENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
ENV G T D T+A + +I + Y Q+ +L+ +GVP R R + R L
Sbjct: 194 -ENVKGLLTHDKGRTYATITDIFEQAGYTIQKKVLNAWDYGVPQKRERLITIGIRNDL 250
>gi|385228214|ref|YP_005788147.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Puno120]
gi|344334652|gb|AEN15096.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Puno120]
Length = 351
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIMQLN 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|430376998|ref|ZP_19431131.1| DNA-cytosine methyltransferase [Moraxella macacae 0408225]
gi|429540135|gb|ELA08164.1| DNA-cytosine methyltransferase [Moraxella macacae 0408225]
Length = 335
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 81/190 (42%), Gaps = 22/190 (11%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
++ ++G GGM M+A +V+ A + + K YE N +G+I++ A D
Sbjct: 8 LISLFAGAGGMDLGFMQAGF--EVILANEYDKKIWATYEYNHQTPLLKGDIRHFNAD--D 63
Query: 75 MYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVG 131
+ PPCQ ++ G + DAR F +++IL T K P ENV G
Sbjct: 64 FPNCDGIIGGPPCQSWSEAGALRGIDDARGQLFFDYIRIL-----TAKQPKFFVAENVSG 118
Query: 132 FETSDTHAKMIEILA---NSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 188
+ ILA + Y +L FGV +R R F + RK L +N
Sbjct: 119 MLAKRHSFAVQNILAQFEQAGYQVFVKMLDAYDFGVAQNRKRVFYIGFRKDLG-----VN 173
Query: 189 NQLLRSPSPL 198
+ L P+PL
Sbjct: 174 DFLF--PTPL 181
>gi|296535365|ref|ZP_06897565.1| site-specific DNA methylase [Roseomonas cervicalis ATCC 49957]
gi|296264307|gb|EFH10732.1| site-specific DNA methylase [Roseomonas cervicalis ATCC 49957]
Length = 337
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 17/170 (10%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT---- 69
RVL+ + G GG + +A A++V D DKA + Y LNFG +++LT
Sbjct: 4 RVLDLFCGGGGSSWGAQRA--GAEIVCGVDAWDKAVEAYGLNFGRE----KVRHLTLTPD 57
Query: 70 ---AAELDMYGAHAWLLSPPCQPYT-RQGLQKQSSDARAFSFLKILELIPHTVKP-PHML 124
A D+ L SP C +T +G + + +++ ++ + + P P L
Sbjct: 58 TGPEALGDIGPIDLILASPECTHHTCARGSRPRDEESKRTAYY--VTRFARDLNPRPRWL 115
Query: 125 FVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 174
+ENVV + + + E L Y +E +L FGVP SR R F L
Sbjct: 116 VIENVVHMRGWNGYDLLFEELHELGYRIRETVLDASDFGVPQSRRRVFIL 165
>gi|300905017|ref|ZP_07122835.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1]
gi|301305818|ref|ZP_07211903.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1]
gi|415865124|ref|ZP_11538058.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 85-1]
gi|424757713|ref|ZP_18185448.1| putative DNA methylase [Escherichia coli O111:H11 str. CFSAN001630]
gi|300403166|gb|EFJ86704.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1]
gi|300838908|gb|EFK66668.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1]
gi|315254408|gb|EFU34376.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 85-1]
gi|421949161|gb|EKU06151.1| putative DNA methylase [Escherichia coli O111:H11 str. CFSAN001630]
Length = 354
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 15/175 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGN----IQNLT 69
+V +F+SG GG +A + +V D + A + NF + + I N
Sbjct: 13 KVFDFFSGCGGTSQGFHQAGM--DIVFGLDFDVDAASSFRANFPQAAFINSDIRLIDNNA 70
Query: 70 AAELDMYGAHAWLL---SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
+L + ++L PCQPY++Q K++ D R + + H + P +FV
Sbjct: 71 INKLVKKHRNDYILFSGCAPCQPYSKQNSNKKNDDPRLDLLKEFSRFVEHYM--PDFIFV 128
Query: 127 ENVVGFE----TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
ENV G + T +E+L++ Y ++ +GVP +R R +A +
Sbjct: 129 ENVPGMQKFNKNEGTFMMFLEMLSSKGYSVDYKVMPAAWYGVPQTRERLVLIASK 183
>gi|428778178|ref|YP_007169965.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
gi|428692457|gb|AFZ45751.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
Length = 320
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA-- 71
RV++ ++G GG+ +L + Q+V A D A D+Y+ NF H + ++ ++ ++
Sbjct: 8 RVVDLFAGCGGL--TLGFQNQGFQLVVAADNWKTAIDIYKNNFSHDIFPIDLSDIESSIE 65
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQS--SDARAFSFLKILELIPHTVKPPHMLFVENV 129
L + + PPCQ +++ G + ++ +SF +I+E + P +ENV
Sbjct: 66 VLKDFEPDIIIGGPPCQDFSQAGKRDENLGRGNLTYSFARIIEQVK-----PQYFVMENV 120
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
D + + I++L + Y +L GVP R RYF + +
Sbjct: 121 DQLVKKDVYKESIKLLKSRSYGITVQLLDASLCGVPQKRKRYFVIGE 167
>gi|307244197|ref|ZP_07526312.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus stomatis
DSM 17678]
gi|306492347|gb|EFM64385.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus stomatis
DSM 17678]
Length = 534
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 13/174 (7%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+++ +SG GGM +A ++V A D + A VYE NFG + L E
Sbjct: 197 KLVSLFSGCGGMDLGFKQA--GYEIVYANDFDSDAQRVYEKNFGEIDKRSI---LDVDEK 251
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG-F 132
++ PCQP++ G ++ +D+R + + L +I K P ++ ENV G
Sbjct: 252 EIPDCDILTAGFPCQPFSNAGNRRGVNDSRGNLYKECLRVINE--KHPKVVVFENVRGLL 309
Query: 133 ETSDTHAK-MIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
T D + +IE + ++ Y T +++ +GVP +R R +A RK L+
Sbjct: 310 STKDENGNPLIETIISNLYELGYKTTYKLVNASSYGVPQNRIRVIVVAFRKDLN 363
>gi|254443346|ref|ZP_05056822.1| C-5 cytosine-specific DNA methylase superfamily [Verrucomicrobiae
bacterium DG1235]
gi|198257654|gb|EDY81962.1| C-5 cytosine-specific DNA methylase superfamily [Verrucomicrobiae
bacterium DG1235]
Length = 349
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 24/191 (12%)
Query: 4 DMCKNDGEAWRVL----EFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR 59
+ K +GE R + ++G GG R++L + + + V + +++ A Y+ NFG
Sbjct: 21 ESSKAEGEVVRARFTFSDIFAGAGGGRFALER--LEGRCVFSCELDKFAQRTYQANFGET 78
Query: 60 PYQGNIQNLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTV 118
PY G+I +++ + H L + PCQP++ G K D RA + E+I V
Sbjct: 79 PY-GDIFDVSPKSVP---PHNILFAGFPCQPFSHAGKGKGLRDPRAQVIFPLFEVI--EV 132
Query: 119 KPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQE--FILSPLQ------FGVPYSRPR 170
P +ENV G H ++ + LT+E + + P+Q FG+ R R
Sbjct: 133 AKPSAFILENVNGL-LGKRHVHSLQYILG--VLTKELGYYIPPVQTLKASDFGLAQKRER 189
Query: 171 YFCLAKRKPLS 181
F + RK L
Sbjct: 190 VFIVGFRKSLG 200
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 334 QHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQAG 390
+ +R TPRE A L FP F FP +S Q + LGN++++ V+ L + + G
Sbjct: 294 EGIRRMTPREWARLQGFPDSFTFP--VSATQAFKQLGNAVAVPVIEALAKQVLDALG 348
>gi|156936516|ref|YP_001440431.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
gi|156534770|gb|ABU79595.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
Length = 415
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 157/401 (39%), Gaps = 63/401 (15%)
Query: 16 LEFYSGIGGMRYSLMKA--------DVSAQVVEAFDIND-----KANDVYELNFGHRPYQ 62
L+ ++G GG+ L +A ++S + + + +N ++ D+ E++ H+
Sbjct: 19 LDLFAGAGGLSEGLREAGFTSLYANEISPRYAQTYAVNHPGTIVESRDIREVD-AHKIR- 76
Query: 63 GNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH 122
N+ L ELD+ PPCQ ++ ++ + D+R F + L + P
Sbjct: 77 -NLLGLKRGELDLIAG-----GPPCQGFSINAPKRSTEDSRNHLFREYLRFVSEF--QPR 128
Query: 123 MLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKP 179
+ +ENV V FE T ++E L N Y IL +G+P +R R L R
Sbjct: 129 AVLIENVPGMVSFEGGATLDAILESLKNLGYEADVRILYAPHYGIPQTRWRTIILGCRDG 188
Query: 180 LSFRCQLLNNQLLRSP-----SPLLGNDDMT------VITKHDQPDDSWDKLLESCDPV- 227
L+ +L L ++P + G ++ + H D+ L C+
Sbjct: 189 LN-PTELFPEPLRQAPVRVNFTSQFGGKNLVNLPISLELPSHVTVRDAIGDLPSLCNGEI 247
Query: 228 -ERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE-ETVEVDRCVSIDHFLVPLSLIERW 285
E+ + +S D N + G+ V AA + ++R I W
Sbjct: 248 GEQVKSYRHSAD--NQYQKLMRIGSDGVTCHEAARLSKINLERMAHIPQG-------GNW 298
Query: 286 GSAMDIVYPDSKRCCCFTKSYYRYVK----GTGSLLATVQPKNKGKASSLKEQHLRYFTP 341
+ D + P R + RY + G S + T + G + + R FT
Sbjct: 299 TNIPDELLPRGMRMARRSDHTKRYGRVHPDGLASTILTKCDPHWG--AYFHYEQDRTFTV 356
Query: 342 REVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLL 382
RE A L SFP + F S ++Y +GN+ V PLL
Sbjct: 357 REAARLQSFPDTYTFCG--SRVEQYEQVGNA-----VPPLL 390
>gi|420399961|ref|ZP_14899165.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
gi|393019502|gb|EJB20645.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
Length = 351
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 145/384 (37%), Gaps = 51/384 (13%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIMQLD 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLQLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VVG + ++ Y+ + IL+ L +GVP R R + K SF+
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK--SFK-- 169
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
Q P P I H D+ L P++ +GD + G
Sbjct: 170 ----QKFHFPKP---------IKTHFSLKDALGDL----PPIQS----GENGDAL----G 204
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
+L +F + + + L+ + + G + D + + + +T +
Sbjct: 205 YLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKNLRPKSGYTNT 264
Query: 306 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 365
Y + + T + + + R + RE A L SFP +++F S ++
Sbjct: 265 YAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSVREGARLQSFPDNYKFCGSSSAKRL 324
Query: 366 YALLGNSLSIAVVAPLLQYLFAQA 389
+GN+ V PLL A A
Sbjct: 325 Q--IGNA-----VPPLLSVALAHA 341
>gi|319776343|ref|YP_004138831.1| Modification methylase HaeIII [Haemophilus influenzae F3047]
gi|127460|sp|P20589.1|MTH3_HAEAE RecName: Full=Modification methylase HaeIII; Short=M.HaeIII;
AltName: Full=Cytosine-specific methyltransferase HaeIII
gi|148915|gb|AAA24970.1| methyltransferase [Haemophilus aegyptius]
gi|2961233|gb|AAC05696.1| HaeIII DNA modification methyltransferase [Haemophilus influenzae
biotype aegyptius]
gi|317450934|emb|CBY87160.1| Modification methylase HaeIII [Haemophilus influenzae F3047]
Length = 330
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 134/365 (36%), Gaps = 61/365 (16%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
++ +SG GG+ KA +++ A + + YE N + +G+I +++ E
Sbjct: 3 LISLFSGAGGLDLGFQKAGF--RIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFP 60
Query: 75 MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET 134
+ PPCQ ++ G + D R F + + ++ K P ENV G
Sbjct: 61 K--CDGIIGGPPCQSWSEGGSLRGIDDPRGKLFYEYIRILKQ--KKPIFFLAENVKGM-M 115
Query: 135 SDTHAK----MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 190
+ H K I+ N+ Y +L+ +GV R R F + FR +L N
Sbjct: 116 AQRHNKAVQEFIQEFDNAGYDVHIILLNANDYGVAQDRKRVFYIG------FRKELNINY 169
Query: 191 LLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 250
L P P L K D WD +++ N N E
Sbjct: 170 L--PPIPHL--------IKPTFKDVIWDLKDNPIPALDKNKTNGNKCIYPNHEY------ 213
Query: 251 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 310
F + T+ + R + + +W V ++C ++
Sbjct: 214 ------FIGSYSTIFMSR-----------NRVRQWNEPAFTVQASGRQCQLHPQA----- 251
Query: 311 KGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLG 370
++ V KN K KE R T RE A + FP DF F H+ SL Y ++G
Sbjct: 252 ----PVMLKVS-KNLNKFVEGKEHLYRRLTVRECARVQGFPDDFIF-HYESLNDGYKMIG 305
Query: 371 NSLSI 375
N++ +
Sbjct: 306 NAVPV 310
>gi|428771327|ref|YP_007163117.1| DNA-cytosine methyltransferase [Cyanobacterium aponinum PCC 10605]
gi|428685606|gb|AFZ55073.1| DNA-cytosine methyltransferase [Cyanobacterium aponinum PCC 10605]
Length = 344
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 14/175 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++GIGG +L + A+ V A + + +Y N+G P +G+I + E+
Sbjct: 8 KFIDLFAGIGGFHQAL--SYYGAKCVFASEWDKHCQGIYLKNYGILP-EGDITIIPENEI 64
Query: 74 DMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
+H L + PCQ ++ G Q +D R F I+ + + P +L +ENV F
Sbjct: 65 P---SHDILCAGFPCQAFSISGKQLGFNDTRGTLFFDIVRIAQY--HQPSLLILENVKNF 119
Query: 133 ETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
D K ++++ NS Y +L+ FGVP R R + L RK L+ +
Sbjct: 120 ARHD-EGKTLKVVENSLNEIGYDVFYKVLNASNFGVPQKRERIYILGFRKDLNVK 173
>gi|94995093|ref|YP_603191.1| Type II restriction-modification system methylation subunit
[Streptococcus pyogenes MGAS10750]
gi|94548601|gb|ABF38647.1| Type II restriction-modification system methylation subunit
[Streptococcus pyogenes MGAS10750]
Length = 321
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 17/172 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG--HRPYQGNIQNLTAA 71
++LE + GIG +R + + + +VV+ +I+ Y +G ++P A
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEIDRACVKSYNALYGEDYKPKSVVEYKAPNA 64
Query: 72 ELD--MYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLFV 126
++D M+G+ PCQ ++R G +K ++S R+ + + +I P +
Sbjct: 65 KIDLVMHGS-------PCQDFSRIGKKKGGVKNSGTRSSLLFETIRIIKEMKDKPKWIIW 117
Query: 127 ENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
ENV G D+ ++ L N Y ++ IL+ + FG+P R R F ++
Sbjct: 118 ENVKGVLDRNMRDSFFIYLKELENLGYESKYEILNAMDFGIPQKRERIFVVS 169
>gi|254228592|ref|ZP_04922017.1| Site-specific DNA methylase [Vibrio sp. Ex25]
gi|262392607|ref|YP_003284461.1| DNA-cytosine methyltransferase [Vibrio sp. Ex25]
gi|151938974|gb|EDN57807.1| Site-specific DNA methylase [Vibrio sp. Ex25]
gi|262336201|gb|ACY49996.1| DNA-cytosine methyltransferase [Vibrio sp. Ex25]
Length = 427
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 21/192 (10%)
Query: 18 FYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYG 77
F++GIGG + L + + ++N V + ++G P G+I NL A+E+
Sbjct: 13 FFAGIGG--FDLAFENQGFEPSFQCELNAFCQSVLKKHWGRVPLHGDISNLDASEIPK-- 68
Query: 78 AHAWLLSPPCQPYT-------RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
A W PCQ + RQGL+ +S F +LI P + +ENVV
Sbjct: 69 ATVWCGGFPCQDLSVARGSKGRQGLRGSNSGL----FYPFFDLIAS--HKPEAVVIENVV 122
Query: 131 GFETSDTHAK---MIEILANSDYLTQEFILSPLQFGVPYSRPRYF-CLAKRKPLSFRCQL 186
G +S ++E L + Y +++ FG P SRPR F C + PL L
Sbjct: 123 GLLSSHNGQDFRIILEKLTSIGYAVAWRVVNSRFFGAPQSRPRVFICAFRGNPLKAFSTL 182
Query: 187 LNNQLLRSPSPL 198
+ P L
Sbjct: 183 YETGVGTKPKDL 194
>gi|535137|emb|CAA56493.1| type II DNA-methyltransferase [Bacillus phage phi3T]
Length = 326
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 17/193 (8%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
+ VLE + G GG+ + K+ ++V+A DI+ A Y NFG Q +I +
Sbjct: 13 GFTVLELFCG-GGLGATGFKS-AGYEIVKALDIDKNAVKAYRHNFGDYVEQADINEIDID 70
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
L PPCQ ++ G + R + LE+I K P ENV G
Sbjct: 71 SLP--DTDVIFGGPPCQDFSVAGKGVGADGERGKLVWRYLEIIER--KQPKAFVFENVKG 126
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 188
T T +IE Y +++ +GV R R F + R L F+
Sbjct: 127 LITKRHRPTFDALIEKFNEIGYEISWEVVNAWDYGVAQKRERVFIVGVRNDLGFKFDF-- 184
Query: 189 NQLLRSPSPLLGN 201
P+PL G+
Sbjct: 185 ------PNPLEGD 191
>gi|390456269|ref|ZP_10241797.1| cytosine-specific methyltransferase [Paenibacillus peoriae KCTC
3763]
Length = 379
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLTAAELD 74
L +SG GGM KA V+ +V + +++ A + YE N ++G+I+N EL+
Sbjct: 7 LSLFSGAGGMDVGFKKAGVN--IVWSNELDKDACNTYEANHPESTLFRGDIRN-AFNELE 63
Query: 75 MY-GAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVV 130
Y G PPCQ ++ G + +D R+ +++L ++ +I P +ENV
Sbjct: 64 AYKGTDIIFGGPPCQGFSVAG-KMDPNDERSTLIWTYLDVVRIIK-----PKAFVLENVS 117
Query: 131 GFET----SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
D KM +I Y F+L+ +GVP R R F +
Sbjct: 118 ALAKLEKWKDVRTKMFQIANEMGYSCYPFLLNSSNYGVPQKRERVFFIG 166
>gi|420459983|ref|ZP_14958782.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
gi|393077085|gb|EJB77834.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
Length = 348
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAA 71
++V + + G GG+ Y A +++ A DI+ A Y+ N + +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SAHPHFELIWANDIDKDAILSYQANHKEAKTILCDIAQLHCH 60
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVV 130
L L PPCQ Y+ G +K A F +L++L L+ P + ENVV
Sbjct: 61 NLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLYLVK-----PKIFVFENVV 115
Query: 131 GF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
G + ++ DY+ + IL+ L +GVP R R + K
Sbjct: 116 GLMSMQKGQLFKQICNAFKERDYILEHAILNALDYGVPQIRERVILVGTLK 166
>gi|425464485|ref|ZP_18843798.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9809]
gi|389833503|emb|CCI21919.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9809]
Length = 159
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGHRPYQG 63
D + R ++ + G+GG R ++ + ++ + V + DI+ A +Y NFG +P QG
Sbjct: 5 KDSKKIRFVDLFCGLGGFRVAIEQVCRQKNLESDCVFSCDIDKDARAIYHANFGDQP-QG 63
Query: 64 NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHM 123
+I + A LD+ + PCQP++ G K D R F +I ++ K P
Sbjct: 64 DITEIAA--LDIPNHDILMAGFPCQPFSICGDLKGFEDTRGTLFFEIARIL--KAKQPAA 119
Query: 124 LFVENVVGFETSDTHAKMIEILANS 148
ENV + K +E++ ++
Sbjct: 120 FIPENVKQLQ-GHQQGKTLEVILDT 143
>gi|218441855|ref|YP_002380184.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
gi|218174583|gb|ACK73316.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
Length = 342
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 18/180 (10%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGN-IQNLTAAEL 73
V++ ++G GG+ + + FD+N A Y N +GN ++ + E
Sbjct: 33 VVDLFAGCGGLSLGF---EAQGFLTIGFDMNHDACQSYCHNL-----EGNCLEIILTPET 84
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDAR-AFS-FLKILELIPHTVKPPHMLFVENVVG 131
+ + SPPCQP++ G QK +D R F FL +E P + +ENV G
Sbjct: 85 LLPDCRVIIGSPPCQPFSVSGKQKGLADIRDGFPIFLSAVERYK-----PELWIIENVRG 139
Query: 132 --FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 189
+ ++I N DYL + +L+ + P +R R F + R +F C+L N+
Sbjct: 140 LFYRNKWYLEEIITQFRNLDYLVEVKLLNASWYETPQNRERVFIIGHRGKFTFPCRLSNS 199
>gi|254456253|ref|ZP_05069682.1| Cytosine-specific methyltransferase HphIA [Candidatus Pelagibacter
sp. HTCC7211]
gi|207083255|gb|EDZ60681.1| Cytosine-specific methyltransferase HphIA [Candidatus Pelagibacter
sp. HTCC7211]
Length = 342
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 24/196 (12%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL- 73
V +F+SG GG+ +A QV A D + + F H +NL +
Sbjct: 4 VNDFFSGCGGLSQGFKEAGFKIQV--AVD----KEEAFLKTFSHNFKDSQTKNLDLGDSK 57
Query: 74 ---DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
D+ + + PPCQ ++ G + D R +L + E + T P VENV
Sbjct: 58 TLNDIPKSDIIIAGPPCQGFSITG-PRNIDDPRNKLYLSVFETLKLT--NPKAFVVENVR 114
Query: 131 GFET---SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 187
G +T + ++I+ ++ Y+ E +L+ +GVP R R F + +K L
Sbjct: 115 GLKTMWGGNVFKEIIKKFESAGYIVTESLLNSADYGVPQIRHRVFIVGIKKEL------- 167
Query: 188 NNQLLRSPSPLLGNDD 203
N+ P P DD
Sbjct: 168 -NKKFEFPKPEFDKDD 182
>gi|417939243|ref|ZP_12582536.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK970]
gi|343390688|gb|EGV03268.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK970]
Length = 406
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60
M + N E + + F+SG+GG+ + + +VV A + + A Y++N
Sbjct: 1 MTNSVSSNRPEKYNIAAFFSGVGGIELGFEQTN-EFRVVYANEFDKYARQTYQVNHPDTY 59
Query: 61 YQG-NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
G +I ++ ++ + PCQ ++ G +K D R F ++L +I
Sbjct: 60 LDGRDIHDVQPEDIPAERVDVIMGGFPCQAFSIAGYRKGFDDDRGDLFFELLRMIEGC-- 117
Query: 120 PPHMLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
P +F+ENV VG + +T + E L ++Y + +L+ +G +P +R R + +
Sbjct: 118 KPRAIFIENVKNMVGHDHGNTFKVIREALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|319897026|ref|YP_004135221.1| modification methylase haeiii [Haemophilus influenzae F3031]
gi|317432530|emb|CBY80890.1| Modification methylase HaeIII [Haemophilus influenzae F3031]
Length = 330
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 134/365 (36%), Gaps = 61/365 (16%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
++ +SG GG+ KA +++ A + + YE N + +G+I +++ E
Sbjct: 3 LISLFSGAGGLDLGFQKAGF--RIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFP 60
Query: 75 MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET 134
+ PPCQ ++ G + D R F + + ++ K P ENV G
Sbjct: 61 K--CDGIIGGPPCQSWSEGGSLRGIDDPRGKLFYEYIRILKE--KKPIFFLAENVKGM-M 115
Query: 135 SDTHAK----MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 190
+ H K I+ N+ Y +L+ +GV R R F + FR +L N
Sbjct: 116 AQRHNKAVQEFIQEFDNAGYDVHIILLNANDYGVAQDRKRVFYIG------FRKELNINY 169
Query: 191 LLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 250
L P P L K D WD +++ N N E
Sbjct: 170 L--PPIPHL--------IKPTFKDVIWDLKDNPIPALDKNKTNGNKCIYPNHEY------ 213
Query: 251 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 310
F + T+ + R + + +W V ++C ++
Sbjct: 214 ------FIGSYSTIFMSR-----------NRVRQWNEPAFTVQASGRQCQLHPQA----- 251
Query: 311 KGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLG 370
++ V KN K KE R T RE A + FP DF F H+ SL Y ++G
Sbjct: 252 ----PVMLKVS-KNLNKFVEGKEHLYRRLTVRECARVQGFPDDFIF-HYESLNDGYKMIG 305
Query: 371 NSLSI 375
N++ +
Sbjct: 306 NAVPV 310
>gi|334345632|ref|YP_004554184.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1]
gi|334102254|gb|AEG49678.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1]
Length = 368
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 8/167 (4%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL- 73
V++ + G GG+ Y L A ++ V D++ E N G + + ++ ++TA +L
Sbjct: 18 VVDLFCGAGGLAYGLRSAGLT--VKAGVDLDPSCKHPLEENTGAKFEKRDVADVTADDLI 75
Query: 74 DMYG-AHAWLLS--PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+G A +L+ PCQP++ ++S D R ++ L+ E + VK P ++ +ENV
Sbjct: 76 GWFGDAEVRVLAGCAPCQPFSTYSQSRKSKDDR-WTLLREFERLAVDVK-PEIVTMENVP 133
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
G + + L Y ++ +GVP SR R LA +
Sbjct: 134 GLANQSVWKEFVAALRGEGYKVWWSEIACDDYGVPQSRRRLVLLASK 180
>gi|359768802|ref|ZP_09272571.1| putative methyltransferase [Gordonia polyisoprenivorans NBRC 16320]
gi|359313840|dbj|GAB25404.1| putative methyltransferase [Gordonia polyisoprenivorans NBRC 16320]
Length = 344
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 20/183 (10%)
Query: 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR--------PY 61
G+ R ++ ++GIGG +L + AQ V A + + A YE NFG R +
Sbjct: 51 GQPIRFVDHFAGIGGFHLAL--DSLGAQCVFATERDRFARTTYENNFGPRCPELFAAGRF 108
Query: 62 QGNIQNLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP 120
+I ++ ++ AH + + PCQP++ G Q+ D F ++ LI HT
Sbjct: 109 ARDIADVDPTDVP---AHDIMTAGFPCQPFSFAGRQRGLDDEGGVMFYQLARLIMHTR-- 163
Query: 121 PHMLFVENVVGFE---TSDTHAKMIEILANS-DYLTQEFILSPLQFGVPYSRPRYFCLAK 176
P E+ G T A + E + Y + +L FG+P RPR F +
Sbjct: 164 PRAFIFEHGAGLRFHHHGTTFAAIRETMTTQLGYSFRTAVLRACDFGLPQLRPRLFMVGF 223
Query: 177 RKP 179
R P
Sbjct: 224 RDP 226
>gi|239625135|ref|ZP_04668166.1| EaeI methyltransferase alpha subunit [Clostridiales bacterium
1_7_47_FAA]
gi|239519365|gb|EEQ59231.1| EaeI methyltransferase alpha subunit [Clostridiales bacterium
1_7_47FAA]
Length = 301
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 11/173 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
R F+SGIGG+ L K+ + ++V +I V + ++ + P +I LT
Sbjct: 2 RAASFFSGIGGIDLGLEKSGI--EIVYQCEILSFGQKVLKKHWPNIPLSQDITKLTGK-- 57
Query: 74 DMYGAHAWLLSPPCQPYT--RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
D+ A + PCQ + QG +K AR+ F K ELI P +F+ENV G
Sbjct: 58 DIPDAEIFAGGFPCQDLSLANQGKRKGLEGARSGLFYKYAELIGEN--RPRWVFIENVPG 115
Query: 132 FETSDTHAKMIEILANSD---YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
S A +L+ D Y IL FG P R R + +A R +
Sbjct: 116 LLNSAKGADFKVVLSTLDELGYGVSWRILDAKFFGTPQRRRRTYIVASRGTIG 168
>gi|420458340|ref|ZP_14957150.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-26]
gi|393075861|gb|EJB76615.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-26]
Length = 351
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 17/174 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y K +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGFSKHP-HFELIWANDIDKDAILSYQAN--HKEAQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFEN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG S ++ + + N+ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGL-MSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|385229774|ref|YP_005789690.1| type II DNA modification methyltransferase [Helicobacter pylori
Puno135]
gi|344336212|gb|AEN18173.1| type II DNA modification methyltransferase [Helicobacter pylori
Puno135]
Length = 351
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHSHFELIWANDIDKDAILSYQAN--HKEVQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|434396656|ref|YP_007130660.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
gi|428267753|gb|AFZ33694.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
Length = 724
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++ ++GIGG R + +A + V + +I+ +VY NFG +P ++T +++
Sbjct: 9 IDLFAGIGGFRLAFEQA--GYKCVYSCEIDSACQEVYFNNFGEKPKD----DITKIDIEK 62
Query: 76 YGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VG 131
L + PCQP++ G ++ D R F I ++I K P ++ +ENV V
Sbjct: 63 IPDFDVLTAGFPCQPFSICGKRQGFEDTRGTLFFHICKIIE--AKQPSVVLLENVKHLVH 120
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA-KRKPLSFRCQLLNN 189
+ T ++ L + YL IL+ FG+P +R R A K K F NN
Sbjct: 121 HDRGRTLDIILYSLEDLGYLVDYKILNSKDFGLPQNRERIIIFATKNKKFDFNLIETNN 179
>gi|1127162|pdb|1DCT|A Chain A, Dna (Cytosine-5) Methylase From Haeiii Covalently Bound To
Dna
gi|1127163|pdb|1DCT|B Chain B, Dna (Cytosine-5) Methylase From Haeiii Covalently Bound To
Dna
Length = 324
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 134/365 (36%), Gaps = 61/365 (16%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
++ +SG GG+ KA +++ A + + YE N + +G+I +++ E
Sbjct: 3 LISLFSGAGGLDLGFQKAGF--RIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFP 60
Query: 75 MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET 134
+ PPCQ ++ G + D R F + + ++ K P ENV G
Sbjct: 61 K--CDGIIGGPPCQSWSEGGSLRGIDDPRGKLFYEYIRILKQ--KKPIFFLAENVKGM-M 115
Query: 135 SDTHAK----MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 190
+ H K I+ N+ Y +L+ +GV R R F + FR +L N
Sbjct: 116 AQRHNKAVQEFIQEFDNAGYDVHIILLNANDYGVAQDRKRVFYIG------FRKELNINY 169
Query: 191 LLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 250
L P P L K D WD +++ N N E
Sbjct: 170 L--PPIPHL--------IKPTFKDVIWDLKDNPIPALDKNKTNGNKCIYPNHEY------ 213
Query: 251 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 310
F + T+ + R + + +W V ++C ++
Sbjct: 214 ------FIGSYSTIFMSR-----------NRVRQWNEPAFTVQASGRQCQLHPQA----- 251
Query: 311 KGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLG 370
++ V KN K KE R T RE A + FP DF F H+ SL Y ++G
Sbjct: 252 ----PVMLKVS-KNLNKFVEGKEHLYRRLTVRECARVQGFPDDFIF-HYESLNDGYKMIG 305
Query: 371 NSLSI 375
N++ +
Sbjct: 306 NAVPV 310
>gi|417847988|ref|ZP_12493944.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis SK1073]
gi|339455586|gb|EGP68188.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis SK1073]
Length = 406
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP 60
M + N E + + F+SG+GG+ + + +VV A + + A Y+LN
Sbjct: 1 MTNSVSSNRPEKYNIAAFFSGVGGIELGFEQTN-EFRVVYANEFDKYARQTYQLNHPDTY 59
Query: 61 YQG-NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
G +I + ++ + PCQ ++ G +K D R F ++L +I
Sbjct: 60 LDGRDIHAVQPEDIPAERVDVIMGGFPCQAFSIAGYRKGFDDDRGDLFFELLRMIEGC-- 117
Query: 120 PPHMLFVENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
P +F+ENV VG + +T + E L ++Y + +L+ +G +P +R R + +
Sbjct: 118 KPRAIFIENVKNMVGHDHGNTFKVIREALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|448382790|ref|ZP_21562285.1| modification methylase XorII [Haloterrigena thermotolerans DSM
11522]
gi|445661259|gb|ELZ14050.1| modification methylase XorII [Haloterrigena thermotolerans DSM
11522]
Length = 361
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 149/391 (38%), Gaps = 74/391 (18%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V++ +SG+GG+ SL ++ A VV A D N+KA + Y NF + N+ TA +
Sbjct: 5 KVVDLFSGVGGL--SLGISEAGADVVLAVDNNEKALEAYNSNFPDK-ITKNLDLSTADQD 61
Query: 74 DMYGAHAWLL--------SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
D+ PPCQ ++ G ++ D R LK E I + P
Sbjct: 62 DILSNTGITKEEVDIVTGGPPCQGFSVMG-KRDPDDERNNLLLKYAEHI--SGLSPDYFV 118
Query: 126 VENVVGFETSDTHAKMIEIL-----ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
+ENV G + D + E L A + + +L +FGVP R R L R
Sbjct: 119 MENVKGLMSGDKREFLEEFLNEIRSAGYNIVEPIQVLDAAEFGVPQYRERVIVLGYRD-- 176
Query: 181 SFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWD---KLLESCDPVERFLEFSNSG 237
C P P + T D +SWD L + D VE +
Sbjct: 177 --TC----------PKP-------SYPTPDDSNVNSWDAIGDLPNNLDDVENGV------ 211
Query: 238 DQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSK 297
E G S ++ + T+ + +D P+ ER + V P S
Sbjct: 212 --YKGELGPQSDYVKKINSWKQKASTIP-EGITGLD----PVDHSERVRNRFADVDPGSN 264
Query: 298 RCCCFTKSYYRYVKGTGSL-LATVQPKNKGKASSLKEQH---LRYFTPREVANLHSFPGD 353
YYR K S+ L ++G + + H R T RE A + SFP
Sbjct: 265 DEVS---RYYRLKKTEPSVTLRAGSSPDRGTHTPARPIHPVAPRCITVREAARIQSFPDW 321
Query: 354 FQFP--HHLSLRQRYALLGNSLSIAVVAPLL 382
FQF + LRQ +GNS V PLL
Sbjct: 322 FQFSPTKYHGLRQ----IGNS-----VPPLL 343
>gi|440683449|ref|YP_007158244.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
gi|428680568|gb|AFZ59334.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
Length = 449
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 166/413 (40%), Gaps = 80/413 (19%)
Query: 7 KNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ 66
KN + +E ++G GGM +A V+ A +I+ +E NF P+ Q
Sbjct: 25 KNKYKRPIAVELFAGAGGMTLGFEQAGFD--VLAAVEIDPVHCATHEFNF---PFW---Q 76
Query: 67 NLTAAELDMYGAHAWLLS-------------PPCQPYTRQG--LQKQSSDARAFSFLK-I 110
+ +++ G LS PPCQ ++ G L ++ F +++ +
Sbjct: 77 IFCKSVVEISGEEIRKLSKIKNQEIDVLFGGPPCQGFSLIGKRLLDDPRNSLVFHYIRLV 136
Query: 111 LELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL---ANSDY-LTQEF-ILSPLQFGVP 165
LEL P + +ENV G ++E++ A +Y + Q++ +L+ +GVP
Sbjct: 137 LEL------QPKFVVLENVKGMTVGKHREFILEVISAFAAINYKVYQDYQVLNAANYGVP 190
Query: 166 YSRPRYFCLAKRKPLSF------------RCQLLNNQLLRSPSPLLGNDDMTVITKHDQP 213
+R R F LA R+ L + + +NNQLL +PS D+ +I + +
Sbjct: 191 QNRERLFLLACRQDLDLPNYPQPITTYIKKKKAINNQLLLTPSVKKALQDLPIIENYPEL 250
Query: 214 DDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSID 273
+ D +L R+++ N + + + + EV
Sbjct: 251 YEQ-DWILADFGKSSRYVQRLNGFNSKFNNYSYKRIYDPKILTSSLRTKHTEVS------ 303
Query: 274 HFLVPLSLIERWGSAM-DIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLK 332
I+R+ + + P S+ F K Y KG + L NKG +S +
Sbjct: 304 --------IQRFAETLPGKIEPISR----FYKLDY---KGICNTLRAGTASNKGAFTSPR 348
Query: 333 EQH---LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLL 382
H R T RE A LHS+P F+F H++ + +GNS V PLL
Sbjct: 349 PIHPFIPRCITVREAARLHSYPDWFRF--HVTKWHGFRQIGNS-----VPPLL 394
>gi|427406708|ref|ZP_18896913.1| DNA (cytosine-5-)-methyltransferase [Selenomonas sp. F0473]
gi|425708138|gb|EKU71179.1| DNA (cytosine-5-)-methyltransferase [Selenomonas sp. F0473]
Length = 342
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 17/174 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKA---DVSAQVVEAFDINDKANDVYELNFGHRPY--QGNIQN 67
++ ++ ++GIGG+R +A D+ V +D +KA Y NF H P+ +G++
Sbjct: 2 YKAIDLFAGIGGIRLGFDQAFEKDIDTVFVSEWD--EKAQITYRENF-HDPFPIRGDLTK 58
Query: 68 LTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
+ A++ AH LL+ PCQ ++ G ++ D R F + + P ++F
Sbjct: 59 IREADIP---AHDILLAGFPCQAFSLAGKRRGFEDTRGTLFFDVERIA--RFHRPRVIFC 113
Query: 127 ENV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
ENV V + T + I Y +L+ FGVP R R + +A R
Sbjct: 114 ENVKNLVNHDRGRTFRVIRSIFEKLGYRIFYKVLNSKDFGVPQHRERIYIVAFR 167
>gi|31074171|gb|AAP20556.1| DNA cytosine-5 methyltransferase 2 isoform gamma [Bos taurus]
Length = 63
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH 58
E R LE YSGIGGM +L ++ + AQVV A D+N AN+VY+ NF H
Sbjct: 2 EPLRALELYSGIGGMHQALRESCIPAQVVAAVDVNTVANEVYKYNFPH 49
>gi|444375329|ref|ZP_21174624.1| type II DNA modification methyltransferase [Helicobacter pylori
A45]
gi|443620177|gb|ELT80628.1| type II DNA modification methyltransferase [Helicobacter pylori
A45]
Length = 160
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 17/168 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHSHFELIWANDIDKDAILSYQAN--HKEAQTILCDIMQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 YHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYF 172
VVG S ++ + + N+ Y+ + IL+ L +GVP R + F
Sbjct: 114 VVGL-MSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIREKVF 160
>gi|420453298|ref|ZP_14952137.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-8]
gi|393070906|gb|EJB71695.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-8]
Length = 269
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y ++V A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-STHPHFELVWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L+ P + EN
Sbjct: 59 CHNLPRVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGTLK 166
>gi|419648632|ref|ZP_14179966.1| type II DNA modification methyltransferase [Campylobacter jejuni
subsp. jejuni LMG 9217]
gi|380626143|gb|EIB44638.1| type II DNA modification methyltransferase [Campylobacter jejuni
subsp. jejuni LMG 9217]
Length = 356
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 12/175 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAE 72
+V + + G GG+ Y + +V A DI+ A Y LN + + Y NI L E
Sbjct: 2 KVADIFCGAGGLSYGF-STNPFFNIVFANDIDKDAIKSYALNHPNTKVYHKNISKLDEME 60
Query: 73 LDMYGAHAWLLS-PPCQPYTRQGLQKQSSDARAF-SFLKILELIPHTVKPPHMLFVENVV 130
+ +G LL PPCQ Y+ G +K A F +L++L+++ P + ENV+
Sbjct: 61 MLNFGKIDLLLGGPPCQSYSTLGKRKMDERANLFQEYLRVLKIL-----QPKIFIFENVI 115
Query: 131 GF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
G + + + +Y+ IL+ +GVP R R + R+ + +
Sbjct: 116 GLLSMQKGELFKYICCQFKKINYVVDYSILNAAFYGVPQIRERLIIVGIRQDIYY 170
>gi|420456726|ref|ZP_14955547.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-16]
gi|393075357|gb|EJB76112.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-16]
Length = 351
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-STHSYFELIWANDIDKDAILSYQAN--HKEAQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPR 170
VVG S ++ + + N+ Y+ + IL+ L +GVP R R
Sbjct: 114 VVGL-MSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRER 158
>gi|338795759|emb|CBX19867.1| C-5 cytosine specific DNA methylase [Streptococcus pyogenes]
Length = 321
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA-----NDVYELNFGHRPYQGNIQNL 68
++LE + GIG +R + + + +VV+ +I D+A N +Y ++ + G
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEI-DRACVKSYNALYGEDYKPKSVVGYKAPN 63
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLF 125
+L M+G+ PCQ ++R G ++ ++S R+ + + +I P +
Sbjct: 64 EKIDLVMHGS-------PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKDKPKWII 116
Query: 126 VENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
ENV G D+ ++ L N Y ++ IL+ + FG+P R R F ++ +F
Sbjct: 117 WENVKGVLDRNMRDSFFIYLKELENLGYESKYEILNAMDFGIPQKRERVFVVSYLGKNNF 176
Query: 183 RCQLLNNQLLRSPSPLLGND 202
L + R S L D
Sbjct: 177 SFNKLERKETRPLSEFLERD 196
>gi|94263940|ref|ZP_01287743.1| DNA (cytosine-5-)-methyltransferase [delta proteobacterium MLMS-1]
gi|93455685|gb|EAT05864.1| DNA (cytosine-5-)-methyltransferase [delta proteobacterium MLMS-1]
Length = 366
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 71/175 (40%), Gaps = 16/175 (9%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQNLTAAEL 73
V +F+ G GG KA + V A D A +E NF G +I L A++L
Sbjct: 12 VFDFFCGCGGTSRGFQKAGID--VAFALDTGPDAKSTFERNFPGTFFCHKSINELNASDL 69
Query: 74 D------MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+ G + PCQP+TRQ ++ SD + + + P +FVE
Sbjct: 70 EPILQAHKNGYKLFCGCAPCQPFTRQFTERAKSDTKKNLLGQFGVFVER--HEPDFVFVE 127
Query: 128 NVVGFETSDTHA-----KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
NV G + H +E+L Y +++ +G P R R+ LA +
Sbjct: 128 NVPGLQKVPKHKDGPFPAFLELLMGLGYHITYGVVAAQDYGAPQLRRRFILLASK 182
>gi|399926077|ref|ZP_10783435.1| DNA-cytosine methyltransferase, partial [Myroides injenensis
M09-0166]
Length = 444
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++G+GG +L K + + V A ++ + ++Y+ N G G+I N +
Sbjct: 6 KFIDLFAGLGGFHLALAK--LGHECVFASELMPELQNLYKTNHG-IVCAGDI-NQVDIKK 61
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDA--RAFSFLKILELIPHTVKPPHMLFVENVVG 131
D+ PCQP+++ G Q+ +D R F KI+E++ H P +F+ENV
Sbjct: 62 DIPEHDILCGGFPCQPFSQAGSQQGFNDEKDRGNLFYKIMEILQH--HKPEFVFLENVPN 119
Query: 132 FETSD--THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
++ D +I+ + Y Q+ I+SP FG+P R R + + + K
Sbjct: 120 LKSHDDGNTYTVIKNELETLYEVQDDIISPHYFGIPQHRTRIYIVGRLK 168
>gi|269219712|ref|ZP_06163566.1| DNA (cytosine-5-)-methyltransferase [Actinomyces sp. oral taxon 848
str. F0332]
gi|269210954|gb|EEZ77294.1| DNA (cytosine-5-)-methyltransferase [Actinomyces sp. oral taxon 848
str. F0332]
Length = 310
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF----GHRPYQGNIQNLTA 70
VLEF++GIG R L A FD + KA +YE F H G+I +TA
Sbjct: 14 VLEFFAGIGLARIGLEAAGFRVTWANDFDPDKKA--MYEAQFEDAGDHVFALGDIGKITA 71
Query: 71 AELDMYGAHAWLLSPPCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
EL A AW S PC + R GL S + F+++LE + P + +
Sbjct: 72 DELPRDAALAW-ASSPCTDLSLAGGRAGLAGNQS-GTFWHFVRLLEELEDGR--PQIAVL 127
Query: 127 ENVVGFETS---DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKP 179
EN+ G TS D I+ Y + +F +P SRPR F + + P
Sbjct: 128 ENLTGLATSHGGDDLIAAIKAFNRLGYSVDALAIDARRF-LPQSRPRLFLVGAQTP 182
>gi|379011713|ref|YP_005269525.1| putative DNA methylase [Acetobacterium woodii DSM 1030]
gi|375302502|gb|AFA48636.1| putative DNA methylase [Acetobacterium woodii DSM 1030]
Length = 347
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 13/166 (7%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLTAAE 72
+V +F+SG GG KA ++ DI++ A++ + NF + +I+NL +
Sbjct: 6 KVYDFFSGCGGASSGFRKAGF--EIALGIDIDNDASETFRQNFPEAEFINEDIRNLMPED 63
Query: 73 LDMY----GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
+ Y + PCQP+++Q K D R + I + P LF+EN
Sbjct: 64 ISEYVDTESKKLFCGCAPCQPFSKQNRNKTGEDMRINLLDEFYRFIDFYL--PDYLFIEN 121
Query: 129 VVGFETSDTHAKMIEI----LANSDYLTQEFILSPLQFGVPYSRPR 170
V G + +E L Y + +++ FGVP R R
Sbjct: 122 VPGIQNFKMGGSPLESFVHKLKECGYKIKTQVIAASDFGVPQIRKR 167
>gi|2894387|emb|CAA74997.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase
(C2) [Bacillus pumilus]
Length = 392
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 14/172 (8%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLTAAELD 74
L+ +SG GG L A + + + A +++ A++ + NF P YQ NI +E+
Sbjct: 5 LDLFSGAGGFTLGLKNAGI--KTIGAIELDRFASETFRKNFPEIPHYQANITEYGDSEII 62
Query: 75 --MYGAHAWLLSPPCQPYTRQG-LQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
G PPCQ ++ G Q D R +++ ++ P+++ +ENV G
Sbjct: 63 KLFKGVDIITGGPPCQGFSVAGPSQYGIIDNRNNLIMEMYRF--ASILKPNLVILENVKG 120
Query: 132 F---ETSDTHAKMIEIL---ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
+ S T + E + +N Y + F+L+ FGVP R R F +A R
Sbjct: 121 ILNGKLSPTKKALDEYMNNMSNIGYKIKVFVLNTSDFGVPQGRQRVFVIAAR 172
>gi|308182632|ref|YP_003926759.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori PeCan4]
gi|308064817|gb|ADO06709.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori PeCan4]
Length = 351
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPYFELIWANDIDKDAILSYQAN--HEEVQTILCDIMQLN 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|293371777|ref|ZP_06618187.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f]
gi|292633229|gb|EFF51800.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f]
Length = 459
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLTAAE 72
+V F++G GG+ +A +V+ A + ++ ++ Y+ N + + +I+ L AA
Sbjct: 2 KVASFFAGCGGLDLGFEQA--GYEVIWANEFDEGIHETYQFNHPNTYLCKSDIRTLKAA- 58
Query: 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
D+ ++ PPCQ ++ G Q +D R FL ++LI K P +ENV G
Sbjct: 59 -DIPDCDGFIGGPPCQSWSEGGKQLGLNDDRGRLFLDYIQLIKQ--KRPKFFIIENVQGM 115
Query: 133 ETSDTHAK----MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
SD H K + L + Y+ +L+ + +P R R F + K L+
Sbjct: 116 -ISDKHFKTFLSFLSSLECAGYVVSYSLLNAADYCIPQDRFRVFIVGFIKELN 167
>gi|169824652|ref|YP_001692263.1| cytosine-specific DNA-methyltransferase [Finegoldia magna ATCC
29328]
gi|297588631|ref|ZP_06947274.1| type II restriction-modification system methylation subunit
[Finegoldia magna ATCC 53516]
gi|304440076|ref|ZP_07399968.1| type II restriction-modification system methylation subunit
[Peptoniphilus duerdenii ATCC BAA-1640]
gi|167831457|dbj|BAG08373.1| cytosine-specific DNA-methyltransferase [Finegoldia magna ATCC
29328]
gi|297574004|gb|EFH92725.1| type II restriction-modification system methylation subunit
[Finegoldia magna ATCC 53516]
gi|304371443|gb|EFM25057.1| type II restriction-modification system methylation subunit
[Peptoniphilus duerdenii ATCC BAA-1640]
Length = 320
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 17/199 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA--- 70
++LE + GIG +R + + +S +VV+ +I+ Y +G ++ A
Sbjct: 5 KILELFGGIGAIRKAFINLKISYEVVDYVEIDKACVKSYNALYGEAYKPKSVVGYKAPNE 64
Query: 71 -AELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLFV 126
+L M+G+ PCQ ++R G ++ ++S R+ + + +I P +
Sbjct: 65 KIDLIMHGS-------PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKDKPKWIIW 117
Query: 127 ENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
ENV G D+ ++ L + Y ++ IL+ + FG+P R R F ++ +F
Sbjct: 118 ENVKGVLDRNMRDSLFIYLKELEDLGYESKYEILNAMDFGIPQKRERIFVVSCLGANNFS 177
Query: 184 CQLLNNQLLRSPSPLLGND 202
L + R S L D
Sbjct: 178 FNKLERKETRPLSEFLEKD 196
>gi|375002902|ref|ZP_09727242.1| DNA (cytosine-5-)-methyltransferase [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353077590|gb|EHB43350.1| DNA (cytosine-5-)-methyltransferase [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
Length = 379
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQNLTAA 71
W LEF++GIG R + +A + +D+N KA +YE ++ H +I L +
Sbjct: 12 WTALEFFAGIGLARAGMEQAGLKTIWANDYDLNKKA--MYEGHWKSHELLLADIHALKSE 69
Query: 72 ELDMYGAHAWLLSPPCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+L AW S PC + R GL+ + F F ++ + + P ++ +E
Sbjct: 70 DLPSADV-AW-ASSPCTDLSLAGKRAGLRGGRESSAFFGFTDLIAGMNE--RKPEVIVLE 125
Query: 128 NVVGFETS----DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
NV G +S D A + E A Y L +F VP SRPR F + + P+
Sbjct: 126 NVTGLASSHNRDDLRAAVKEFNALG-YAVDAITLDARRF-VPQSRPRLFLIGAKSPI 180
>gi|319779706|ref|YP_004130619.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9]
gi|397661933|ref|YP_006502633.1| cytosine-specific methyltransferase [Taylorella equigenitalis ATCC
35865]
gi|317109730|gb|ADU92476.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9]
gi|394350112|gb|AFN36026.1| cytosine-specific methyltransferase [Taylorella equigenitalis ATCC
35865]
gi|399115775|emb|CCG18578.1| cytosine-specific methyltransferase [Taylorella equigenitalis
14/56]
Length = 329
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 23/193 (11%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG--NIQNL 68
E ++ ++GIGG R +L + A+ V + + + A + Y LNF + I
Sbjct: 10 EGLTFIDLFAGIGGFRVALQ--SLGAKCVFSSEWDKFAKETYWLNFNEIAHDDITKIDEC 67
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
T D+ A PCQ ++ G + D+R F ++ + K P ++F+EN
Sbjct: 68 TIPNHDILCA-----GFPCQAFSISGKRLGFEDSRGTLFFDVVRIAKS--KRPKVIFLEN 120
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 184
V F D + I I+ S Y +L+ +G+P SR R F +A R+ L
Sbjct: 121 VKNFAKHDG-GRTIRIVKESLLRLGYSFDWKVLNSCDYGIPQSRARIFMVAFREDLK--- 176
Query: 185 QLLNNQLLRSPSP 197
+Q + P+P
Sbjct: 177 ----HQEFKFPAP 185
>gi|291530357|emb|CBK95942.1| DNA-methyltransferase (dcm) [Eubacterium siraeum 70/3]
Length = 317
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 117/291 (40%), Gaps = 43/291 (14%)
Query: 19 YSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQNLTAAELDMYG 77
++GIGG+ + V +V A +I+ A Y+ NF + + +I+ + +EL+
Sbjct: 7 FAGIGGIELGFEQ--VGFDIVWANEIDTDACKTYQFNFPKTKLIKSDIRKVNFSELEK-- 62
Query: 78 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 137
PCQP++ G K D R F +I+ + + P ++F+ENV T
Sbjct: 63 IDIITAGFPCQPFSVCGKGKGFFDERGNLFFEIMRAV--DILRPQIIFLENVANL-TEHN 119
Query: 138 HAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLR 193
K ++ N DY+ + I +G+P R R + +A R + L
Sbjct: 120 GGKTFNVIHNELVSRDYIIRYLIADACDYGIPQHRTRTYIVAFR-------DFAKSVLFD 172
Query: 194 SPSP-LLGNDDMTVITKHDQPDDS---------WDKLLESCDPVERFLEFSNSGDQVNTE 243
P L VI K + D S + K+ +S D + FS+ G Q ++
Sbjct: 173 FPQKQQLQKHIFDVIDKRTKADKSFYLDCNSRQYYKMKQSIDDNNQIYRFSDYGIQ-KSK 231
Query: 244 TGFLSTGTAAV-----------DDFGAAEETVEVDRCVSIDHFLVPLSLIE 283
G T A + DDFG + T + C+++ F S +E
Sbjct: 232 DGICFTLKANMGTWYNRVPIIRDDFGIRKITPK--ECLALQGFPKEFSFLE 280
>gi|83942245|ref|ZP_00954706.1| C-5 cytosine-specific DNA methylase [Sulfitobacter sp. EE-36]
gi|83846338|gb|EAP84214.1| C-5 cytosine-specific DNA methylase [Sulfitobacter sp. EE-36]
Length = 384
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 17 EFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNI----QNLTAA 71
EF+ G G +R +L V A DI+ VY N+G +QG+I +L
Sbjct: 13 EFFCGGGMVRAALQD---RWDCVLANDIDAMKCKVYAQNWGQAALHQGDIATMPDDLLTR 69
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP---PHMLFVEN 128
++DMY A S PCQ ++ G + AR+ F + I +K P ++ EN
Sbjct: 70 QIDMYWA-----SSPCQDFSLAGKGRGLGGARSGVFAHWADKIATAIKAGFAPRIIAFEN 124
Query: 129 VVGFETSDTHAKMIEILAN---SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
VVG + + A M +LA Y + +F +P SRPR F + R+ +
Sbjct: 125 VVGLVSRNGGADMNTVLATFVRLGYKVGALEIDARRF-LPQSRPRLFVVCVREDIDI 180
>gi|419418098|ref|ZP_13958451.1| type II DNA modification enzyme [Helicobacter pylori NCTC 11637 =
CCUG 17874]
gi|384374751|gb|EIE30122.1| type II DNA modification enzyme [Helicobacter pylori NCTC 11637 =
CCUG 17874]
Length = 348
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 147/389 (37%), Gaps = 61/389 (15%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPYFELIWANDIDKDAILSYQAN--HKEAQTILCDIMQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 185
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRF----- 168
Query: 186 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 245
Q P P I H D+ L P++ +GD + G
Sbjct: 169 ---KQKFHFPKP---------IKTHFSLKDALGDL----PPIQS----GENGDAL----G 204
Query: 246 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 305
+L +F + + + L+ + + G + D + P+S R KS
Sbjct: 205 YLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDL-PESLR----PKS 259
Query: 306 YY--RYVKGTGSLLATVQPKNKGKASSLKEQH---LRYFTPREVANLHSFPGDFQFPHHL 360
Y Y K A +N SS + H R + RE A L SFP +++F
Sbjct: 260 GYINTYAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSA 319
Query: 361 SLRQRYALLGNSLSIAVVAPLLQYLFAQA 389
S ++ +GN+ V PLL AQA
Sbjct: 320 SAKRLQ--IGNA-----VPPLLSVALAQA 341
>gi|420504023|ref|ZP_15002553.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-62]
gi|393155412|gb|EJC55689.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-62]
Length = 203
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPHFELIWANDIDKDAILSYQAN--HKEAQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGAHK 166
>gi|321312120|ref|YP_004204407.1| cytosine-specific methyltransferase [Bacillus subtilis BSn5]
gi|320018394|gb|ADV93380.1| cytosine-specific methyltransferase [Bacillus subtilis BSn5]
Length = 380
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 22/171 (12%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP----YQGNIQNL 68
++ + +SG GGM KA V VV A +I+ A + YELN P +G+I +
Sbjct: 5 FKAISLFSGAGGMDIGFQKAGV--DVVWANEIDKDACNTYELN---NPDTYLRRGDISEV 59
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDAR---AFSFLKILELIPHTVKPPHMLF 125
+ G PPCQ ++ G + +D R ++FL +L+++ P
Sbjct: 60 YEELKNYNGIDLLFGGPPCQGFSVAG-KMDPTDIRNTLVWNFLDVLKIVK-----PKAFV 113
Query: 126 VENVVGFET----SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYF 172
+ENV T + ++ ++ + Y +IL+ FGVP R R F
Sbjct: 114 IENVKALGTLKKWENVRERIFKLSNDMGYSCNAYILNSSHFGVPQKRERIF 164
>gi|418398074|ref|ZP_12971690.1| hypothetical protein BP354A_6017 [Burkholderia pseudomallei 354a]
gi|418558129|ref|ZP_13122695.1| hypothetical protein BP354E_5814 [Burkholderia pseudomallei 354e]
gi|385363117|gb|EIF68897.1| hypothetical protein BP354E_5814 [Burkholderia pseudomallei 354e]
gi|385367031|gb|EIF72599.1| hypothetical protein BP354A_6017 [Burkholderia pseudomallei 354a]
Length = 480
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 24/230 (10%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL 68
D A+R ++ ++G+GG +L A + Q V A + + ++YE N G +P G+I+ +
Sbjct: 31 DMRAFRFIDLFAGLGGFHLAL--ARMGGQCVFAAEWKEHLRELYETNHGLKP-AGDIREV 87
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQ-SSDARAFSFLKILELIPHTVKPPHMLFVE 127
+++ + PCQP+++ G Q + F + ++ K P +E
Sbjct: 88 HPSDVPEHDVLT--AGFPCQPFSKAGEQLGFECTEQGNLFFNVAAILKE--KKPTFFILE 143
Query: 128 NVVGFETSD---THAKMIEILANSD----YLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
NV D T +++ IL + Y + LSP FG+P R R + + PL
Sbjct: 144 NVPNLLKHDKGRTWEQILRILGTGEGGLGYDIRAQRLSPHHFGIPQIRERVYIVGSLLPL 203
Query: 181 -SFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPD-----DSWDKLLESC 224
SF +NN + L DD + P + W++ L++C
Sbjct: 204 DSFVWPEINNAETNIDTVL---DDRPADARQLSPQVKECLEVWNEFLKAC 250
>gi|413915569|emb|CCM44165.1| DNA-cytosine methyltransferase [Staphylococcus xylosus]
Length = 359
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 154/395 (38%), Gaps = 73/395 (18%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-HRPYQGNIQNLTAAE 72
+VL+ + G GG+ SL + + + ++ A+ + NF + + G+I ++
Sbjct: 4 KVLDLFCGAGGL--SLGFQNAGFNIYGGIEWDEVASLTHTKNFNTNYHFAGDITEVSNET 61
Query: 73 L--DMYGAHAWLLSPPCQPYTRQG-LQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ ++ + PPCQ ++ K D R F + L + + P +ENV
Sbjct: 62 IKKELLQIDVIIGGPPCQGFSSANRYLKDEDDPRNKLFYEYLRFV--NIIRPKAFIIENV 119
Query: 130 VGFETSDT---HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
G T D K++E+ + DY + +LS +GVP R R F + RK L+ +
Sbjct: 120 PGILTRDNGYAKEKILELTESYDYNVEVKVLSSENYGVPEIRKRAFFVGIRKDLNLKFNF 179
Query: 187 LNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 246
N P+ N T HD D LE SG NT
Sbjct: 180 AN------LKPIFEN-----TTVHDAIKD---------------LEVLESGQLYNT---L 210
Query: 247 LSTGTAAVDDFGAAEETVEVDR---CVSIDHFLVPLSLIERWGSAMDIVYP--DSKRCCC 301
+ + + E +++++ V + + + + + G+ D+ D+KR
Sbjct: 211 FGVELSPIQKYYFDENSLQIENHNISVHNEKVVERIKHVPQGGNWRDVPEELWDTKRNNR 270
Query: 302 FTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTP--------REVANLHSFPGD 353
+ +Y R L +P + ++ H+ YF P RE A + SF
Sbjct: 271 HSSAYRR--------LDYSKP-----SITIDTGHMNYFHPVFHRVPSVRESARIQSFNDS 317
Query: 354 FQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
F F + + Q+Y +GN+ V P+L AQ
Sbjct: 318 FVF--YGTKTQQYKQVGNA-----VPPILAQALAQ 345
>gi|403744257|ref|ZP_10953589.1| DNA-cytosine methyltransferase [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122210|gb|EJY56447.1| DNA-cytosine methyltransferase [Alicyclobacillus hesperidum
URH17-3-68]
Length = 282
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 67/166 (40%), Gaps = 9/166 (5%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDK-ANDVYELNFGHRPYQGNIQNLTAAELD 74
++ ++GIGGMR L +A S F DK A YE F + T
Sbjct: 4 IDLFAGIGGMRRGLEEAGCSCV---GFVERDKFARRSYEAIFNTKGEWSAHDIQTVHAQA 60
Query: 75 MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP--PHMLFVENVVGF 132
M A +W PCQ + G + + R+ F ++ LI + P L ENVVGF
Sbjct: 61 MPRADSWTFGFPCQDLSVAGRHRGFTGERSSLFFTVMRLIRELPEDHRPEWLVAENVVGF 120
Query: 133 ETSDTHAKMI---EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
+ + LA S Y + +L FG+P R R F +
Sbjct: 121 LSCKRGYDFLAAQTALAESGYDCEWDVLGATSFGIPQHRDRVFLVG 166
>gi|420441830|ref|ZP_14940775.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-36]
gi|393059959|gb|EJB60834.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-36]
Length = 352
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y K +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGFSKHPY-FELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGIHK 166
>gi|408371100|ref|ZP_11168871.1| DNA-cytosine methyltransferase [Galbibacter sp. ck-I2-15]
gi|407743487|gb|EKF55063.1| DNA-cytosine methyltransferase [Galbibacter sp. ck-I2-15]
Length = 410
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 20/180 (11%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ ++GIGG+R L + + V + + + A YE NFG P+ G+I ++
Sbjct: 85 FKFIDLFAGIGGIR--LAYQNNGGKCVFSSEWDPYAKKTYEANFGEVPF-GDITQISE-- 139
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFL---------KILELIPHTVKPPH 122
+ H LL PCQP++ G+ K++S RA FL I +I H K P
Sbjct: 140 -EFIPDHDILLGGFPCQPFSIAGVSKKNSMGRAHGFLDETQGTLFFDIARIIKH--KQPK 196
Query: 123 MLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPL--QFGVPYSRPRYFCLAKRKPL 180
+ENV + D I++ + L L +F VP +R R + +K +
Sbjct: 197 AFMLENVKNLVSHDKKKTFKVIISTLERLGYNVYFKVLNGKFYVPQNRERIIIVGFKKSI 256
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 332 KEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQ 383
K+++ R TPRE A L FP +F P +S Q Y GNS VV PL+Q
Sbjct: 341 KDKNPRRLTPRECARLQGFPDEFIIP--VSNNQAYKQFGNS----VVTPLIQ 386
>gi|420443465|ref|ZP_14942393.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
gi|393060972|gb|EJB61841.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
Length = 165
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 18/173 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPHFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFEN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
VVG S ++ + + N+ Y+ + IL+ L +GVP R R L++R
Sbjct: 114 VVGL-MSMQKGQLFQRICNAFKERGYILEHAILNTLDYGVPQIRERVI-LSRR 164
>gi|420412053|ref|ZP_14911182.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4228]
gi|420416683|ref|ZP_14915792.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393027711|gb|EJB28799.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4228]
gi|393037112|gb|EJB38150.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 351
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPHFELIWANDIDKDAILSYQAN--HKETQTILCDIMQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALK 166
>gi|326802740|ref|YP_004320558.1| DNA (cytosine-5-)-methyltransferase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651598|gb|AEA01781.1| DNA (cytosine-5-)-methyltransferase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 321
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA-----NDVYELNFGHRPYQGNIQNL 68
++LE + GIG +R + + + +VV+ +I DKA N +Y ++ + G
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEI-DKACVKSYNALYGESYKAKSVIGYKAPN 63
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLF 125
+L M+G+ PCQ ++R G ++ ++S R+ + + +I P +
Sbjct: 64 DKIDLVMHGS-------PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKDKPKWII 116
Query: 126 VENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
ENV G D+ ++ L + Y ++ IL+ + FG+P R R F ++ SF
Sbjct: 117 WENVKGVLDRNMRDSFFIYLKELESLGYESKYEILNAMDFGIPQKRERIFVVSCLGANSF 176
Query: 183 RCQLLNNQLLRSPSPLLGND 202
L + R S L D
Sbjct: 177 SFDKLERKETRPLSEFLEKD 196
>gi|420425058|ref|ZP_14924122.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
gi|393043645|gb|EJB44649.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
Length = 298
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y A +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SAHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALK 166
>gi|304387412|ref|ZP_07369603.1| modification methylase EcoRII [Neisseria meningitidis ATCC 13091]
gi|418288465|ref|ZP_12900948.1| modification methylase EcoRII [Neisseria meningitidis NM233]
gi|418290707|ref|ZP_12902830.1| modification methylase EcoRII [Neisseria meningitidis NM220]
gi|421557387|ref|ZP_16003292.1| cytosine-specific methyltransferase [Neisseria meningitidis 80179]
gi|421559073|ref|ZP_16004948.1| cytosine-specific methyltransferase [Neisseria meningitidis 92045]
gi|304338505|gb|EFM04624.1| modification methylase EcoRII [Neisseria meningitidis ATCC 13091]
gi|372201146|gb|EHP15107.1| modification methylase EcoRII [Neisseria meningitidis NM220]
gi|372201840|gb|EHP15718.1| modification methylase EcoRII [Neisseria meningitidis NM233]
gi|402335025|gb|EJU70300.1| cytosine-specific methyltransferase [Neisseria meningitidis 80179]
gi|402336468|gb|EJU71728.1| cytosine-specific methyltransferase [Neisseria meningitidis 92045]
Length = 336
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 149/396 (37%), Gaps = 98/396 (24%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNI--- 65
+ E + ++ ++GIGG R ++ +V + V + + +DKA Y++NF PY G+I
Sbjct: 16 NNEKFTFIDLFAGIGGFRIAM--ENVGGRCVFSSEWDDKARQTYQVNFNDIPY-GDITLK 72
Query: 66 --QNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFL---------KILELI 114
+ ++ D+ A PCQP++ G+ K+ S R FL + E+I
Sbjct: 73 ETKAAIPSKFDVLTAGF-----PCQPFSIAGVSKKKSLGRETGFLDKAQGTLFFDVAEII 127
Query: 115 -PHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFC 173
H K + V+N+V + +T + L DY +++ ++ VP +R R F
Sbjct: 128 GKHRPKIFLLENVKNLVSHDKGNTFKVIKGTLEELDYQIFYQVMNA-KYYVPQNRERIFI 186
Query: 174 LAKRKPLSFRCQLLNNQL-LRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLE 232
+ F Q N ++ PSP + I +D D D + +L+
Sbjct: 187 VG------FDRQYFNKEINFNFPSPPESQPKLKQIL-----EDDVDNSFTLSDNLWLYLQ 235
Query: 233 FSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIV 292
+ A + FG LV L I R SA
Sbjct: 236 ------------NYAKKHKAKGNGFGFG---------------LVDLDGISRTLSA---- 264
Query: 293 YPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPG 352
RY K +L + KN R TPRE + L FP
Sbjct: 265 ---------------RYYKDGSEILIPQKGKNP-----------RKLTPRECSRLMGFPK 298
Query: 353 DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
DF +S Y GNS+++ PL+Q + Q
Sbjct: 299 DFVI-DAVSKTAAYKQFGNSIAV----PLVQAIAKQ 329
>gi|420395561|ref|ZP_14894788.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1124]
gi|393013997|gb|EJB15171.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1124]
Length = 352
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 15/165 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SMHPYFELMWANDIDKDAILSYQAN--HKKTQTILCDIMQLN 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P M EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPR 170
VVG + ++ Y+ + IL+ L +GVP R R
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRER 158
>gi|384890848|ref|YP_005764981.1| DNA cytosine methyltransferase [Helicobacter pylori 908]
gi|307637157|gb|ADN79607.1| DNA cytosine methyltransferase [Helicobacter pylori 908]
Length = 165
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L VKP +F EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDL----VKPKIFVF-EN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
VVG S ++ + + N+ Y+ + IL+ L +GVP R R L++R
Sbjct: 114 VVGL-ISMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVI-LSRR 164
>gi|448532943|ref|ZP_21621363.1| DNA-cytosine methyltransferase [Halorubrum hochstenium ATCC 700873]
gi|445706177|gb|ELZ58062.1| DNA-cytosine methyltransferase [Halorubrum hochstenium ATCC 700873]
Length = 396
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 138/378 (36%), Gaps = 85/378 (22%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQ 66
+DG A V F+SG GG+ +A V D + A + Y NF + + +++
Sbjct: 21 DDGAAPVVAGFFSGCGGLDLGFERA--GFDVALGSDQWEPAAETYRRNFPDVEFVEEDVR 78
Query: 67 NLTA---------AELDMYGAHAWLLSPPCQPYTRQG-----LQKQSSDARAFSFLKILE 112
L A A D G + PPCQ ++R L + D R F + L
Sbjct: 79 ELDAPAIRESVERAGYDPGGIDVVIGGPPCQGFSRLNNEQIELDEMEKDRRNTLFEEFLR 138
Query: 113 LIPHTVKPPHMLFVENV---VGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPY 166
++ +V P ++ +ENV + +TSD +++ A Y + +L Q+GVP
Sbjct: 139 VV--SVLEPQLVLMENVRDLINRQTSDDRYVKDLIVDEFAAHGYKCEYRVLEAEQYGVPQ 196
Query: 167 SRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDP 226
R R F + + + +R P P P+ SW
Sbjct: 197 KRRRIFFMGTDRDVP----------IRFPEPTT-------------PEGSW--------- 224
Query: 227 VERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWG 286
+G+ + T L T A E+T+E R V + L
Sbjct: 225 -------RTAGEALADATDDLPNMTYA----NTQEKTLERIRHVPPGGYYRDLP------ 267
Query: 287 SAMDIVYPDSKRCCCFTKSYYRY----VKGTGSLLATVQPKNKGKASS----LKEQHLRY 338
D + RC C + VK G+ L + P+ S + RY
Sbjct: 268 ---DRLKTKKYRCDCEDTDTCPHEPEIVKRYGTYLRRLDPEEPSLTVSTNVFIHPSEDRY 324
Query: 339 FTPREVANLHSFPGDFQF 356
TPRE+A L +FP +F F
Sbjct: 325 LTPREMARLQTFPDEFAF 342
>gi|373119048|ref|ZP_09533161.1| DNA (cytosine-5-)-methyltransferase [Lachnospiraceae bacterium
7_1_58FAA]
gi|371665629|gb|EHO30792.1| DNA (cytosine-5-)-methyltransferase [Lachnospiraceae bacterium
7_1_58FAA]
Length = 438
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 16/174 (9%)
Query: 16 LEFYSGIGGMRYSL----MKADVSAQVVEAFDINDKA-NDVYELNFGHRPYQGNIQNLTA 70
L+F+SGIGG R M+ ++ + D + +A +D+ E + Y +I +T
Sbjct: 7 LDFFSGIGGFRKGFELCGMRCVGHCEIDKYADRSYRAIHDIKEDEW----YAADITKVTP 62
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTV---KPPHMLF-- 125
AEL A W PCQ + G Q+ + AR+ F + EL+ +P ++
Sbjct: 63 AELPR--ADLWAAGFPCQDISVSGRQRGINGARSGLFFTLAELVKGQSPENRPTWIVLEN 120
Query: 126 VENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKP 179
V+N++ A +++ LA+ Y + +L+ FG P +R R + +A R P
Sbjct: 121 VKNLLSIHGGWDFAAVLDTLASLGYHIEYGLLNTKDFGPPQNRERVYLVACRHP 174
>gi|328947038|ref|YP_004364375.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
gi|328447362|gb|AEB13078.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
Length = 466
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL 68
D + ++ ++G+GG ++ K + + V A ++ + +Y+ N+G + G+I +
Sbjct: 22 DKHQFSFIDLFAGLGGFHLAMQK--LGGKCVFASELKEDLRILYKENYGIDCF-GDINKV 78
Query: 69 -----TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDA--RAFSFLKILELIPHTVKPP 121
+ DM A PCQP+++ G Q+ +D R F KI++++ K P
Sbjct: 79 DIDKDIPKKFDMLCAGF-----PCQPFSKAGKQQGFNDEKDRGNLFWKIMDILKD--KTP 131
Query: 122 HMLFVENVVGFETSDTHAKMIEILANSD--YLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
+ +ENV +T D I N + Y + I+SP FG+P R R + + + K
Sbjct: 132 EYILLENVQNLQTHDNGNTWEVIRTNLEKLYDVKCDIISPHNFGIPQHRKRIYIVGRLK 190
>gi|392397795|ref|YP_006434396.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
gi|390528873|gb|AFM04603.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
Length = 321
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 28/190 (14%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+ ++ + GIGG R + ++ + V + DI+ A Y+ NFG P ++++T +
Sbjct: 1 MKFIDLFCGIGGFRIAF--EELGGECVFSADIDKYACTTYKDNFGDFP----LRDITKVD 54
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ L + PCQP++ GL+K D R F I ++ K P +ENV G
Sbjct: 55 ENEIPNFDILCAGFPCQPFSIGGLRKGFEDIRGTLFFDIERIL--RAKKPKAFILENVKG 112
Query: 132 FETSDTHAKMIEILANS------------------DYLTQEFILSPLQFGVPYSRPRYFC 173
+ K +EI+ N +Y +++ FGVP +R R +
Sbjct: 113 L-VNHEKGKTLEIILNKLGSKINGIINSEKHDDCLNYNVFYKVVNSKTFGVPQNRERIYI 171
Query: 174 LAKRKPLSFR 183
+ ++F+
Sbjct: 172 IGFENDINFK 181
>gi|449881058|ref|ZP_21784249.1| cytosine-specific methyltransferase [Streptococcus mutans SA38]
gi|449927102|ref|ZP_21801080.1| cytosine-specific methyltransferase [Streptococcus mutans 4SM1]
gi|449159934|gb|EMB63229.1| cytosine-specific methyltransferase [Streptococcus mutans 4SM1]
gi|449251942|gb|EMC49937.1| cytosine-specific methyltransferase [Streptococcus mutans SA38]
Length = 408
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+ + F+SG+GG+ + + +VV A + + A Y LN + P +++ A
Sbjct: 13 YNIAAFFSGVGGIELGFEQTN-EFRVVFANEFDKYARVTYTLNNSNTPLDS--RDIHAVP 69
Query: 73 LDMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV- 129
D G + ++ PCQ ++ G +K D R F ++L +I P +F+ENV
Sbjct: 70 ADEIGDNIDVIVGGFPCQAFSIAGYRKGFEDDRGDLFFELLRMIERC--KPKAIFIENVK 127
Query: 130 --VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
VG + +T + E L ++Y + +L+ FG +P +R R + +
Sbjct: 128 NMVGHDHGNTFKVIREALTENNYFIKWKVLNGKDFGNIPQNRERIYIVG 176
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 336 LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQ 383
+R TP+E N +P DF+ P LS Q Y GNS+ + V+ + +
Sbjct: 275 IRKLTPKETFNAQGYPKDFKIPSELSNGQLYKQAGNSVVVPVIKRIAE 322
>gi|296139305|ref|YP_003646548.1| DNA-cytosine methyltransferase [Tsukamurella paurometabola DSM
20162]
gi|296027439|gb|ADG78209.1| DNA-cytosine methyltransferase [Tsukamurella paurometabola DSM
20162]
Length = 385
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 17/176 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF----GHRPYQGNIQNL 68
WR EF++GIG L KAD+ +V + DI+ +YE +F GHR G++ L
Sbjct: 13 WRAAEFFAGIGLAGIGLEKADI--KVAWSNDISPVKYALYEKHFGEREGHRYIVGDLATL 70
Query: 69 TAAELDMYGAHAWLLSPPCQPY----TRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
A++ + AW S PC TR G+ + +S + + F+K L + + P ++
Sbjct: 71 EASQDPIDIDVAW-ASFPCTDLSVAGTRAGIHRGTSSSAFWYFVKTLSRMKES--RPSVV 127
Query: 125 FVENVVGFET---SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
+ENV T + A +I L Y + F V SRPR F + +
Sbjct: 128 VLENVNALATRRGGEDIASVIRALNGLGYSVDVMSIDAKHF-VAQSRPRLFLVGAK 182
>gi|406980256|gb|EKE01884.1| hypothetical protein ACD_21C00028G0001 [uncultured bacterium]
Length = 319
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 23/176 (13%)
Query: 16 LEFYSGIGGMRYSLMKADVS-AQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
+E +G GG L +A A +VE I+ A +N H N+T +L
Sbjct: 6 IEICAGAGGQALGLEQAGFEHASLVE---IDAHACQTLRVNRSH-------WNVTEGDLH 55
Query: 75 MYGAHAW----LLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
Y A W LL+ PC P+++ G Q + D R F + L L+ P + +EN
Sbjct: 56 YYSAEKWKGIELLAGGVPCPPFSKAGKQLGNQDERDL-FPEALRLVSEC--KPQAVMLEN 112
Query: 129 VVGFETS---DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
V G S + AK+I L Y+ + +L+ FGVP RPR +A +K ++
Sbjct: 113 VRGLLDSVFDEYRAKIIADLKKLGYIAEWRLLNASDFGVPQLRPRVIFVALKKSVA 168
>gi|420414874|ref|ZP_14913990.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4053]
gi|393033841|gb|EJB34902.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4053]
Length = 160
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 17/168 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y A +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SAQPYFELIWANDIDKDAILSYQAN--HKEAQTILCDIVQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFEN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYF 172
VVG S ++ + + N+ Y+ + IL+ L +GVP R F
Sbjct: 114 VVGL-MSMQKGQLFKQICNAFKERGYILENAILNALDYGVPQIREEVF 160
>gi|421718028|ref|ZP_16157329.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
gi|407222820|gb|EKE92618.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
Length = 168
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 15/165 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SIHPHFELIWANDIDKDAILSYQAN--HKEAQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L VKP +F EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDL----VKPKIFVF-EN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPR 170
VVG + ++ Y+ + IL+ L +GVP R R
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRER 158
>gi|385231371|ref|YP_005791290.1| DNA-cytosine methyltransferase [Helicobacter pylori 2018]
gi|325995748|gb|ADZ51153.1| DNA-cytosine methyltransferase [Helicobacter pylori 2018]
Length = 160
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L VKP +F EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDL----VKPKIFVF-EN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPR 170
VVG S ++ + + N+ Y+ + IL+ L +GVP R R
Sbjct: 114 VVGL-ISMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRER 158
>gi|385223522|ref|YP_005783448.1| Type II DNA modification enzyme [Helicobacter pylori 2017]
gi|325997344|gb|ADZ49552.1| Type II DNA modification enzyme [Helicobacter pylori 2017]
Length = 159
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L VKP +F EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDL----VKPKIFVF-EN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPR 170
VVG S ++ + + N+ Y+ + IL+ L +GVP R R
Sbjct: 114 VVGL-ISMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRER 158
>gi|386755513|ref|YP_006228730.1| type II DNA modification (methyltransferase) [Helicobacter pylori
PeCan18]
gi|384561771|gb|AFI02237.1| type II DNA modification (methyltransferase) [Helicobacter pylori
PeCan18]
Length = 351
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPHFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALK 166
>gi|325846341|ref|ZP_08169331.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325481605|gb|EGC84644.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 315
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 19/173 (10%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA-----NDVYELNFGHRPYQGNIQNL 68
++LE + GIG +R + + + +VV+ +I DKA N +Y ++ + G
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEI-DKACVKSYNALYGEDYKPKSVVGYKAPN 63
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLF 125
+L M+G+ PCQ ++R G ++ ++S R+ + + +I P +
Sbjct: 64 EKIDLIMHGS-------PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIINEMKDKPKWII 116
Query: 126 VENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
ENV G D+ ++ L N Y ++ IL+ + FG+P R R F ++
Sbjct: 117 WENVKGVLDRNMRDSFFIYLKELENLGYESKYEILNAMDFGIPQKRERIFVVS 169
>gi|419718252|ref|ZP_14245581.1| modification methylase HpaII [Lachnoanaerobaculum saburreum F0468]
gi|383305602|gb|EIC96958.1| modification methylase HpaII [Lachnoanaerobaculum saburreum F0468]
Length = 346
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 13/176 (7%)
Query: 13 WRVLEFYSGIGGMRYSLMKA---DVSAQVVEAFDINDKANDVYELNFGHR-PYQGNIQNL 68
++ ++ ++GIGG+R +A ++ + +D +KA + Y+ NF G+I +
Sbjct: 2 YKSIDLFAGIGGIRLGFDQAFGNNIKTVFISEWD--EKAVETYKANFNDGIDVVGDITKV 59
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
E D+ L PCQ ++ G ++ DAR F + +I P ++F EN
Sbjct: 60 D--EKDIPNHDILLAGFPCQAFSLAGHKRGFEDARGTLFFDVARIIKK--HKPKIVFCEN 115
Query: 129 V---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
V V + T + IL Y +L+ FGVP +R R + +A R ++
Sbjct: 116 VKNLVNHDRGRTFQVIKNILEELGYAVFYQVLNSKNFGVPQNRERIYIVAFRNDIA 171
>gi|342215469|ref|ZP_08708116.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus sp. oral taxon
375 str. F0436]
gi|341586359|gb|EGS29759.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus sp. oral taxon
375 str. F0436]
Length = 321
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 9/192 (4%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
++LE + GIG +R + + + +VV+ +I+ Y +G ++ A
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEIDKACVKSYNALYGEDYKPKSVVGYKAPNE 64
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
+Y + PCQ ++R G ++ ++S R+ + + +I P + ENV
Sbjct: 65 KIY---LVMHGSPCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKDKPKWIIWENVK 121
Query: 131 GF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 187
G D+ ++ L N Y ++ IL+ + FG+P R R F ++ + +F L
Sbjct: 122 GVLDRNMRDSFFIYLKELENLGYESKYEILNAMDFGIPQKRERIFVVSCLEANNFSFNKL 181
Query: 188 NNQLLRSPSPLL 199
+ R S L
Sbjct: 182 ERKETRPLSEFL 193
>gi|420420451|ref|ZP_14919537.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
gi|393036142|gb|EJB37182.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
Length = 165
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y A +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SAQPYFELIWANDIDKDAILSYQAN--HKEAQTILCDIVQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L VKP +F EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDL----VKPKIFIF-EN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPR 170
VVG + ++ L Y+ + IL+ L +G P R R
Sbjct: 114 VVGLMSMQKGQLFQQICNALKERGYILEHAILNALDYGAPQVRER 158
>gi|238751088|ref|ZP_04612584.1| Modification methylase FnuDI [Yersinia rohdei ATCC 43380]
gi|238710778|gb|EEQ03000.1| Modification methylase FnuDI [Yersinia rohdei ATCC 43380]
Length = 362
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 4 DMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ- 62
++ + + E RVL +SG GGM + + A +VV A DI + A + F +
Sbjct: 3 NIFEREHENIRVLSLFSGGGGMDFGIESA--GGKVVFANDIVENACKTLDKYFPDSDIRL 60
Query: 63 ---GNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK 119
NIQ+ ++ + G PCQ ++ G +K SDAR+ + + L ++ + V+
Sbjct: 61 GDISNIQSFPCVDVVVGGY-------PCQSFSMAGNRKPDSDARSNLYKQFLRVL-NIVR 112
Query: 120 PPHMLFVENVVGFETSDTHAKMIEILA---NSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
P + + ENV G + + + + L + Y +++ ++GVP SR R F +
Sbjct: 113 PKYFV-AENVSGLQQLGAGSFLEQQLTAYQQAGYQVSYHLVNAKEYGVPQSRKRLFIIGV 171
Query: 177 RKPLS--FRCQLLNNQLLRSPSPLL 199
RK L F L + L +P L
Sbjct: 172 RKDLDQYFEFPLATHGKLSQKNPHL 196
>gi|126658057|ref|ZP_01729209.1| DNA cytosine methylase [Cyanothece sp. CCY0110]
gi|126620695|gb|EAZ91412.1| DNA cytosine methylase [Cyanothece sp. CCY0110]
Length = 358
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 19/167 (11%)
Query: 17 EFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMY 76
+ ++GIGGMR ++ +Q V + + + A Y+ NFG +P+ G+I + ++
Sbjct: 44 DLFAGIGGMRMGFSRS--YSQCVFSSEWDKYAQQTYQFNFGEKPF-GDINKINPQDIP-- 98
Query: 77 GAHAWLLSP-PCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
H L+ PCQP++ R+G + ++ ++ +ILE K P +ENV G
Sbjct: 99 -DHDILIGGFPCQPFSTIGKREGFRHETQGNLFYNIAQILE-----AKKPFCFLLENVPG 152
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
D T +++ L + +Y + IL F +P R R + +
Sbjct: 153 LVNHDKVQTFNIILKTLDSLNYDVRYSILDAALFNLPQVRERIYIVG 199
>gi|450121904|ref|ZP_21866494.1| cytosine-specific methyltransferase [Streptococcus mutans ST6]
gi|449228643|gb|EMC28002.1| cytosine-specific methyltransferase [Streptococcus mutans ST6]
Length = 408
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+ + F+SG+GG+ + + +VV A + + A Y LN + P +++ A
Sbjct: 13 YNIAAFFSGVGGIELGFEQTN-EFRVVFANEFDKYARVTYTLNNSNTPLDS--RDIHAVP 69
Query: 73 LDMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV- 129
D G + ++ PCQ ++ G +K D R F ++L +I P +F+ENV
Sbjct: 70 ADEIGDNIDVIVGGFPCQAFSIAGYRKGFEDDRGDLFFELLRMIEKC--KPKAIFIENVK 127
Query: 130 --VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
VG + +T + E L ++Y + +L+ FG +P +R R + +
Sbjct: 128 NMVGHDHGNTFKVIREALTENNYFIKWKVLNGKDFGNIPQNRERIYIVG 176
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 336 LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQ 383
+R TP+E N +P DF+ P LS Q Y GNS+ + V+ + +
Sbjct: 275 IRKLTPKETFNAQGYPKDFKIPSELSNGQLYKQAGNSVVVPVIKRIAE 322
>gi|386754039|ref|YP_006227257.1| site-specific DNA methyltransferase [Helicobacter pylori Shi112]
gi|384560297|gb|AFI00764.1| site-specific DNA methyltransferase [Helicobacter pylori Shi112]
Length = 327
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 9/171 (5%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAEL 73
+L ++G GG+ KA V +D N Y LN + R + +I+NL +E+
Sbjct: 3 LLSLFAGAGGLDLGFEKAGFKIVVANEYDKN--ITPTYRLNHKNTRLLEKDIKNLQTSEI 60
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF- 132
+ + + PPCQ ++ G K DAR F + L L+ P ENV G
Sbjct: 61 N-FSVDGIIGGPPCQSWSEAGNLKGIDDARGQLFYEYLRLLREL--KPKFFLAENVRGML 117
Query: 133 -ETSDTHAK-MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ +T K ++ Y +++ +GV R R F + RK L
Sbjct: 118 AQRHETSVKNILNAFKECGYEVNTHLVNAKDYGVAQERLRVFYIGFRKDLK 168
>gi|419642666|ref|ZP_14174450.1| type II DNA modification enzyme [Campylobacter jejuni subsp. jejuni
ATCC 33560]
gi|380624230|gb|EIB42892.1| type II DNA modification enzyme [Campylobacter jejuni subsp. jejuni
ATCC 33560]
Length = 320
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
+ ++F SGIGG R L KA + + +I+ A Y+ F + + + +LT
Sbjct: 1 MKFIDFCSGIGGGRLGLEKAGFTC--IAFSEIDKAAIKTYKRLFDTKN-ELELGDLTKIN 57
Query: 73 LDMYGAHAWLLSP-PCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
++ L+S PCQ ++ R+GL + F IL+ +K P+ +E
Sbjct: 58 PEILPDFDLLISGFPCQSFSIVGKREGLDNKEKGQVIFYLADILK-----IKQPNFFILE 112
Query: 128 NVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
NV G D T K++E+L + DY +L+ L F + SR R + + +K L+
Sbjct: 113 NVKGLLNHDKGQTFQKILELLKSLDYEVSTKLLNSLDFSLAQSRERVYFIGIKKSLN 169
>gi|423490993|ref|ZP_17467643.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BtB2-4]
gi|402427209|gb|EJV59319.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BtB2-4]
Length = 527
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 20/205 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V E +SGIG +L + V + V +I+ A Y G G+I + EL
Sbjct: 5 KVFESFSGIGTQSMALKQLGVDYETVGIAEIDKFAIQSYMAIHGETKNYGDISKIDPTEL 64
Query: 74 -DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF--VENVV 130
DM + S PCQ + G Q+ + L E + T KP ++L V+N+V
Sbjct: 65 PDM---DLFTYSFPCQDLSISGKQRGMGEGTRSGLLYECEKVITTKKPKYLLLENVKNLV 121
Query: 131 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 190
G + K +E L + Y +L+ +GVP +R R F ++ +L +
Sbjct: 122 GKKFKPDFDKWLEWLESQGYKNYWQVLNAKDYGVPQNRERVFVVS----------ILGEE 171
Query: 191 LLRSPSPLLGNDDMTVITKHDQPDD 215
PS D+ +I KHD P +
Sbjct: 172 TYEFPSL---QKDIKII-KHDIPQE 192
>gi|291618481|ref|YP_003521223.1| Bsp6IM [Pantoea ananatis LMG 20103]
gi|291153511|gb|ADD78095.1| Bsp6IM [Pantoea ananatis LMG 20103]
Length = 384
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLTAA 71
W LEF++GIG R + +A + +D+N KA +YE ++ + +I +L +
Sbjct: 12 WTALEFFAGIGLARAGMEQAGIKTVWANDYDVNKKA--MYEGHWQSADFLLADIHSLKSE 69
Query: 72 ELDMYGAHAWLLSPPCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
EL AW S PC + R GL+ + F F ++ + + P ++ +E
Sbjct: 70 ELPDADV-AW-ASSPCTDLSLAGKRVGLRGGRESSAFFGFTDLIAGMHE--RQPEVIVLE 125
Query: 128 NVVGFETS----DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
NV+G +S D A + E A Y L +F VP SRPR F + + P++
Sbjct: 126 NVIGLASSNEREDLRAAVKEFNALG-YSVDAITLDARRF-VPQSRPRLFIIGVKTPVN 181
>gi|153814224|ref|ZP_01966892.1| hypothetical protein RUMTOR_00433 [Ruminococcus torques ATCC 27756]
gi|145848620|gb|EDK25538.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus torques ATCC
27756]
Length = 702
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 13/184 (7%)
Query: 7 KNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNI 65
K + +R+L+ +SG GGM Y + K + V A D N+KA ++ N G+I
Sbjct: 344 KEETPMFRILDLFSGAGGMSYGMEKNEHFTTEV-ALDFNEKALQTFKHNMPDTETVCGDI 402
Query: 66 --QNLTAAELDMYGA---HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP 120
+ + A +++ A + + PPCQ ++ +G + D R F F + L + +
Sbjct: 403 TDEKIKAKVIELCKAKKVNMIIGGPPCQGFSLKGKKLGLDDPRNFLFNEYLRFV--EILK 460
Query: 121 PHMLFVENVVGFETSDT---HAKMIEILANSDYLTQEFILSPLQFGVPYSRPR-YFCLAK 176
P + +ENV ++ ++I+ + Y + +L+ FGVP +R R F +K
Sbjct: 461 PEVFVIENVKALLSTSAGWFKDQIIKKVTEMGYHVEYGVLTASDFGVPQARQRAIFICSK 520
Query: 177 RKPL 180
K +
Sbjct: 521 NKSI 524
>gi|386748451|ref|YP_006221659.1| type II R-M system methyltransferase [Helicobacter cetorum MIT
99-5656]
gi|384554693|gb|AFI06449.1| type II R-M system methyltransferase [Helicobacter cetorum MIT
99-5656]
Length = 319
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 9/169 (5%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
++F SGIGG R L + ++ + V +IN +A YEL F G++ + +L
Sbjct: 5 IDFCSGIGGGRLGLEQCNL--KCVGHAEINREALRTYELFFKDTNNFGDLMQVNPNDLPH 62
Query: 76 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 135
+ + PCQ ++ G +K D R +++++ +K P +ENV G
Sbjct: 63 FDV--LISGFPCQAFSINGKRKGFDDTRGTIIYGLIDILK--IKQPKCFLLENVKGLINH 118
Query: 136 DTHA---KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ A MI+ L Y T IL+ F + +R R + + RK L
Sbjct: 119 NKKATFNTMIKALQEVGYTTYYEILNSADFKLAQNRERIYIVGFRKDLK 167
>gi|342214696|ref|ZP_08707377.1| putative DNA (cytosine-5-)-methyltransferase [Veillonella sp. oral
taxon 780 str. F0422]
gi|341591437|gb|EGS34597.1| putative DNA (cytosine-5-)-methyltransferase [Veillonella sp. oral
taxon 780 str. F0422]
Length = 327
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 11/171 (6%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL 68
D + +++ ++GIGG R +VV + +I+ A Y+ N+G P G+I +
Sbjct: 78 DNADYTMIDLFAGIGGTRLGFQLTG-RTKVVFSSEIDKFAAKTYKSNYGEEP-SGDITLI 135
Query: 69 TAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
E+ H L+ PCQ +++ G + D R F +I +I K P +E
Sbjct: 136 HEEEIP---NHDILVGGFPCQAFSQAGKKLGFEDTRGTLFFEIERIIK--AKRPKAFLLE 190
Query: 128 NVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
NV ++ D T++ + L + Y + + FGVP +R R + +
Sbjct: 191 NVKNLKSHDKGKTYSVIKTTLEDLGYAVYDNVFKAKDFGVPQNRERIYIVG 241
>gi|414075630|ref|YP_006994948.1| type II modification methylase [Anabaena sp. 90]
gi|413969046|gb|AFW93135.1| type II modification methylase [Anabaena sp. 90]
Length = 317
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ--NLT 69
+ +V++ +SG GG+ + ++V AF+ A +VY+ NF H ++ ++ N
Sbjct: 5 SLKVIDLFSGCGGLSVGFQNSGF--EIVAAFENWKSAINVYQQNFHHPIFEYDLSQVNNN 62
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVEN 128
+ + + PPCQ ++ G K++ D R + E++ + +EN
Sbjct: 63 YSIFKQFLPDVIIGGPPCQDFSSAG--KRNEDLGRGDLSITFAEIVANVSS--QWFVLEN 118
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
V F S + + +IL ++ Y E +L GVP R R+FC+ +
Sbjct: 119 VELFRKSHKYQEFKQILKSAGYGLTEKVLDASLCGVPQKRKRFFCIGE 166
>gi|15677157|ref|NP_274310.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis MC58]
gi|161870164|ref|YP_001599334.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis 053442]
gi|218768314|ref|YP_002342826.1| modification methylase [Neisseria meningitidis Z2491]
gi|385328559|ref|YP_005882862.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis
alpha710]
gi|385338145|ref|YP_005892018.1| putative type II restriction-modification system enzyme Mod
[Neisseria meningitidis WUE 2594]
gi|385341790|ref|YP_005895661.1| modification methylase EcoRII [Neisseria meningitidis M01-240149]
gi|385851111|ref|YP_005897626.1| modification methylase EcoRII [Neisseria meningitidis M04-240196]
gi|385853078|ref|YP_005899592.1| modification methylase EcoRII [Neisseria meningitidis H44/76]
gi|385857363|ref|YP_005903875.1| modification methylase EcoRII [Neisseria meningitidis NZ-05/33]
gi|416182816|ref|ZP_11612252.1| modification methylase EcoRII [Neisseria meningitidis M13399]
gi|416187695|ref|ZP_11614307.1| modification methylase EcoRII [Neisseria meningitidis M0579]
gi|416196389|ref|ZP_11618159.1| modification methylase EcoRII [Neisseria meningitidis CU385]
gi|416213209|ref|ZP_11622193.1| modification methylase EcoRII [Neisseria meningitidis M01-240013]
gi|421538241|ref|ZP_15984418.1| cytosine-specific methyltransferase [Neisseria meningitidis 93003]
gi|421542586|ref|ZP_15988693.1| cytosine-specific methyltransferase [Neisseria meningitidis NM255]
gi|421544584|ref|ZP_15990660.1| cytosine-specific methyltransferase [Neisseria meningitidis NM140]
gi|421546699|ref|ZP_15992744.1| cytosine-specific methyltransferase [Neisseria meningitidis NM183]
gi|421548951|ref|ZP_15994975.1| cytosine-specific methyltransferase [Neisseria meningitidis NM2781]
gi|421550788|ref|ZP_15996789.1| cytosine-specific methyltransferase [Neisseria meningitidis 69166]
gi|421552902|ref|ZP_15998874.1| cytosine-specific methyltransferase [Neisseria meningitidis NM576]
gi|421561362|ref|ZP_16007210.1| modification methylase HpaII [Neisseria meningitidis NM2657]
gi|421565539|ref|ZP_16011312.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3081]
gi|421567632|ref|ZP_16013366.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3001]
gi|427827954|ref|ZP_18994973.1| modification methylase SsoII [Neisseria meningitidis H44/76]
gi|433465237|ref|ZP_20422719.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM422]
gi|433471639|ref|ZP_20429025.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 68094]
gi|433475175|ref|ZP_20432516.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 88050]
gi|433477738|ref|ZP_20435058.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 70012]
gi|433479967|ref|ZP_20437257.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63041]
gi|433488574|ref|ZP_20445736.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M13255]
gi|433490617|ref|ZP_20447743.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM418]
gi|433505175|ref|ZP_20462114.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9506]
gi|433507300|ref|ZP_20464208.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9757]
gi|433509345|ref|ZP_20466214.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 12888]
gi|433511506|ref|ZP_20468333.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 4119]
gi|433513613|ref|ZP_20470403.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63049]
gi|433515850|ref|ZP_20472618.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2004090]
gi|433517686|ref|ZP_20474432.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 96023]
gi|433520068|ref|ZP_20476788.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 65014]
gi|433522003|ref|ZP_20478694.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 61103]
gi|433524187|ref|ZP_20480848.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97020]
gi|433526381|ref|ZP_20483011.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 69096]
gi|433528361|ref|ZP_20484970.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM3652]
gi|433530562|ref|ZP_20487151.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM3642]
gi|433532831|ref|ZP_20489394.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2007056]
gi|433534752|ref|ZP_20491292.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2001212]
gi|433536912|ref|ZP_20493417.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 77221]
gi|433539073|ref|ZP_20495549.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 70030]
gi|433541146|ref|ZP_20497598.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63006]
gi|7226530|gb|AAF41666.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis MC58]
gi|121052322|emb|CAM08652.1| putative modification methylase [Neisseria meningitidis Z2491]
gi|161595717|gb|ABX73377.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis 053442]
gi|254670478|emb|CBA06174.1| putative DNA modification methylase [Neisseria meningitidis
alpha153]
gi|308389411|gb|ADO31731.1| C-5 cytosine-specific DNA-methylase [Neisseria meningitidis
alpha710]
gi|316984080|gb|EFV63058.1| modification methylase SsoII [Neisseria meningitidis H44/76]
gi|319410559|emb|CBY90927.1| putative type II restriction-modification system enzyme Mod
[Neisseria meningitidis WUE 2594]
gi|325134466|gb|EGC57111.1| modification methylase EcoRII [Neisseria meningitidis M13399]
gi|325136204|gb|EGC58812.1| modification methylase EcoRII [Neisseria meningitidis M0579]
gi|325140483|gb|EGC63004.1| modification methylase EcoRII [Neisseria meningitidis CU385]
gi|325144567|gb|EGC66866.1| modification methylase EcoRII [Neisseria meningitidis M01-240013]
gi|325200082|gb|ADY95537.1| modification methylase EcoRII [Neisseria meningitidis H44/76]
gi|325201996|gb|ADY97450.1| modification methylase EcoRII [Neisseria meningitidis M01-240149]
gi|325205934|gb|ADZ01387.1| modification methylase EcoRII [Neisseria meningitidis M04-240196]
gi|325208252|gb|ADZ03704.1| modification methylase EcoRII [Neisseria meningitidis NZ-05/33]
gi|389605602|emb|CCA44519.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis
alpha522]
gi|402317060|gb|EJU52599.1| cytosine-specific methyltransferase [Neisseria meningitidis 93003]
gi|402317416|gb|EJU52954.1| cytosine-specific methyltransferase [Neisseria meningitidis NM255]
gi|402322944|gb|EJU58394.1| cytosine-specific methyltransferase [Neisseria meningitidis NM183]
gi|402323775|gb|EJU59217.1| cytosine-specific methyltransferase [Neisseria meningitidis NM140]
gi|402325630|gb|EJU61039.1| cytosine-specific methyltransferase [Neisseria meningitidis NM2781]
gi|402329325|gb|EJU64686.1| cytosine-specific methyltransferase [Neisseria meningitidis 69166]
gi|402330081|gb|EJU65430.1| cytosine-specific methyltransferase [Neisseria meningitidis NM576]
gi|402338825|gb|EJU74055.1| modification methylase HpaII [Neisseria meningitidis NM2657]
gi|402343665|gb|EJU78811.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3001]
gi|402343974|gb|EJU79116.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3081]
gi|432203181|gb|ELK59235.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM422]
gi|432208491|gb|ELK64469.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 68094]
gi|432210993|gb|ELK66948.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 88050]
gi|432215403|gb|ELK71292.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 70012]
gi|432216306|gb|ELK72188.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63041]
gi|432223407|gb|ELK79188.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M13255]
gi|432227608|gb|ELK83317.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM418]
gi|432241300|gb|ELK96830.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9506]
gi|432241665|gb|ELK97194.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9757]
gi|432246733|gb|ELL02179.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 12888]
gi|432247145|gb|ELL02584.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63049]
gi|432247554|gb|ELL02991.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 4119]
gi|432252776|gb|ELL08126.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2004090]
gi|432253422|gb|ELL08766.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 96023]
gi|432254790|gb|ELL10124.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 65014]
gi|432259431|gb|ELL14702.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97020]
gi|432259820|gb|ELL15090.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 61103]
gi|432261145|gb|ELL16402.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 69096]
gi|432265162|gb|ELL20358.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM3652]
gi|432266654|gb|ELL21836.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2007056]
gi|432267069|gb|ELL22250.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM3642]
gi|432271494|gb|ELL26619.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2001212]
gi|432273435|gb|ELL28533.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 70030]
gi|432273848|gb|ELL28945.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 77221]
gi|432277159|gb|ELL32208.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63006]
Length = 337
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 149/396 (37%), Gaps = 98/396 (24%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNI--- 65
+ E + ++ ++GIGG R ++ +V + V + + +DKA Y++NF PY G+I
Sbjct: 16 NNEKFTFIDLFAGIGGFRIAM--ENVGGRCVFSSEWDDKARQTYQVNFNDIPY-GDITLK 72
Query: 66 --QNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFL---------KILELI 114
+ ++ D+ A PCQP++ G+ K+ S R FL + E+I
Sbjct: 73 ETKAAIPSKFDVLTAGF-----PCQPFSIAGVSKKKSLGRETGFLDKAQGTLFFDVAEII 127
Query: 115 -PHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFC 173
H K + V+N+V + +T + L DY +++ ++ VP +R R F
Sbjct: 128 GKHRPKIFLLENVKNLVSHDKGNTFKVIKGTLEELDYQIFYQVMNA-KYYVPQNRERIFI 186
Query: 174 LAKRKPLSFRCQLLNNQL-LRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLE 232
+ F Q N ++ PSP + I +D D D + +L+
Sbjct: 187 VG------FDRQYFNKEINFNFPSPPESQPKLKQIL-----EDDVDNSFTLSDNLWLYLQ 235
Query: 233 FSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIV 292
+ A + FG LV L I R SA
Sbjct: 236 ------------NYAKKHKAKGNGFGFG---------------LVDLDGISRTLSA---- 264
Query: 293 YPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPG 352
RY K +L + KN R TPRE + L FP
Sbjct: 265 ---------------RYYKDGSEILIPQKGKNP-----------RKLTPRECSRLMGFPK 298
Query: 353 DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
DF +S Y GNS+++ PL+Q + Q
Sbjct: 299 DFVI-DAVSKTAAYKQFGNSIAV----PLVQAIAKQ 329
>gi|345007263|ref|YP_004810115.1| DNA-cytosine methyltransferase [halophilic archaeon DL31]
gi|344322889|gb|AEN07742.1| DNA-cytosine methyltransferase [halophilic archaeon DL31]
Length = 598
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 27/192 (14%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ----GNIQ--NL 68
V++ +SG GG+ L +A + A DI+ A Y LN P+Q G+++ NL
Sbjct: 170 VVDLFSGAGGLSCGLRQA--GYDIRWAIDIDTDAVATYRLNHPEIPHQNVVCGDVREVNL 227
Query: 69 TAAELDMYGAHAWLLS-PPCQPYTRQGLQKQSSDARAFSFLKILELIPHT--VKP----- 120
TA D L+ PPCQ ++ G + + D +S L +T VK
Sbjct: 228 TARIQDAVSELDLLVGGPPCQSLSKAGYRSRRGDDEDYSILDDDRTTLYTQYVKAVEELR 287
Query: 121 PHMLFVENVVGF--ETSDTHAKMIE-ILANSDYLTQ-------EFILSPL-QFGVPYSRP 169
P + +ENV G E DT ++I+ +L + + L++ EF L + + GVP R
Sbjct: 288 PKTIVMENVEGMVNEVGDTGIRVIDWVLEDLEMLSETGPGYDVEFKLQDMTELGVPQKRE 347
Query: 170 RYFCLAKRKPLS 181
R + R L+
Sbjct: 348 RVLLVGIRDDLT 359
>gi|254413051|ref|ZP_05026823.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180215|gb|EDX75207.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
Length = 353
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 13/172 (7%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL 68
D A V++ ++G GG+ A E A Y+ N YQ +
Sbjct: 21 DATAPLVIDLFAGCGGLALGFEAAGFRTIGYEKLA---DACTTYQHNLHGFCYQTTL--- 74
Query: 69 TAAELDMY-GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
A + D+ GA + PPCQP++ G Q+ D+R F L+ + + +P LF E
Sbjct: 75 -ARQPDLVDGADVIIGGPPCQPFSVGGHQRGLKDSRD-GFPIFLDAV-KSYRPQLALF-E 130
Query: 128 NVVG--FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
NV G F +++ L +Y+ + IL+ +GVP R R FC+A R
Sbjct: 131 NVRGMLFRNKTYFEEIVSALRELNYIVEWEILNAADYGVPQRRERLFCVAHR 182
>gi|406659161|ref|ZP_11067299.1| modification methylase SsoII [Streptococcus iniae 9117]
gi|405577270|gb|EKB51418.1| modification methylase SsoII [Streptococcus iniae 9117]
Length = 406
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 8/170 (4%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLT 69
+ + + F+SG+GG+ + +VV A + + A Y LN+ +I +
Sbjct: 11 KKYNIAAFFSGVGGIELGFEQTG-EFRVVYANEFDKNARKTYALNYPDTFLDSRDIHAVD 69
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
E+ + PCQ ++ G +K D R F ++L +I VK P +F+ENV
Sbjct: 70 PDEIPSETVDLIVGGFPCQAFSIAGYRKGFEDERGDLFFELLRMIK--VKKPRAIFIENV 127
Query: 130 ---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
VG + +T + E L ++Y + +L+ +G +P +R R + +
Sbjct: 128 KNMVGHDHGNTFKVIREALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|303233873|ref|ZP_07320524.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna BVS033A4]
gi|302495017|gb|EFL54772.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna BVS033A4]
Length = 315
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 80/172 (46%), Gaps = 17/172 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA--- 70
++LEF+ GIG +R + + + +VV+ +I+ Y +G ++ A
Sbjct: 5 KILEFFGGIGAIRKAFINLKIPYEVVDYVEIDKACVKSYNALYGEDYKPKSVVAYKAPNE 64
Query: 71 -AELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLFV 126
+L M+G+ PCQ ++R G ++ ++S R+ + + +I + P +
Sbjct: 65 KIDLVMHGS-------PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKEKPKWIIW 117
Query: 127 ENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
ENV G D+ ++ L + Y ++ IL+ + FG+P R R F ++
Sbjct: 118 ENVKGVLDRNMRDSFFIYLKELESLGYESKYEILNAMDFGIPQKRERIFVVS 169
>gi|260913722|ref|ZP_05920198.1| modification methylase NgoPII [Pasteurella dagmatis ATCC 43325]
gi|260632261|gb|EEX50436.1| modification methylase NgoPII [Pasteurella dagmatis ATCC 43325]
Length = 329
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 141/382 (36%), Gaps = 89/382 (23%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQNLTA-- 70
+V+ +SG GG+ KA V +D A ++ N + +G+I+++
Sbjct: 2 KVISLFSGCGGLDLGFEKAGFEIPVANEYDKTIWA--TFKANHPKTKLIEGDIRSIKEDD 59
Query: 71 --AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLF 125
E+D + PPCQ ++ G + +DAR F +++IL+ K P
Sbjct: 60 FPNEID-----GIIGGPPCQSWSEAGSLRGINDARGQLFFDYIRILK-----SKQPKFFL 109
Query: 126 VENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
ENV G S+ ++++ + Y +++ +GV R R F + RK LS
Sbjct: 110 AENVSGMLANRHSEAVQNILKMFEDCGYDVTLTMVNAKDYGVAQERKRVFYIGFRKDLSI 169
Query: 183 RCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNT 242
Q P ND+ + K D WD L E+ P + ++ VN
Sbjct: 170 SFQF--------PIGSTVNDEDKITLK----DIIWD-LQETAVPA--LAQNKSNPQAVNN 214
Query: 243 ETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCC- 301
F TG S + + ++ W V ++C
Sbjct: 215 NEYF--TG--------------------SFSPIFMSRNRVKSWNEQGFTVQASGRQCQLH 252
Query: 302 --------FTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGD 353
+ + YR+V G KE R T REVA + FP D
Sbjct: 253 PQAPKMEKYGINDYRFVVG-------------------KENLYRRMTIREVARVQGFPDD 293
Query: 354 FQFPHHLSLRQRYALLGNSLSI 375
F+F + + Y ++GN++ +
Sbjct: 294 FKFIYQ-NTNDAYKMIGNAVPV 314
>gi|420487096|ref|ZP_14985704.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|420520981|ref|ZP_15019412.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
gi|393104649|gb|EJC05206.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|393127568|gb|EJC28013.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
Length = 351
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 15/165 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPHFELIWANDIDKDAILSYQAN--HKETQAILCDIVQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPR 170
VVG + ++ Y+ + IL+ L +GVP R R
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRER 158
>gi|188527304|ref|YP_001909991.1| site-specific DNA methyltransferase [Helicobacter pylori Shi470]
gi|386751241|ref|YP_006224461.1| site-specific DNA methyltransferase [Helicobacter pylori Shi417]
gi|386752834|ref|YP_006226053.1| site-specific DNA methyltransferase [Helicobacter pylori Shi169]
gi|188143544|gb|ACD47961.1| site-specific DNA methyltransferase [Helicobacter pylori Shi470]
gi|384557499|gb|AFH97967.1| site-specific DNA methyltransferase [Helicobacter pylori Shi417]
gi|384559092|gb|AFH99559.1| site-specific DNA methyltransferase [Helicobacter pylori Shi169]
Length = 327
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 9/171 (5%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAEL 73
+L ++G GG+ KA V +D N Y LN + R + +I+NL +E+
Sbjct: 3 LLSLFAGAGGLDLGFEKAGFKIVVANEYDKN--ITPTYRLNHKNTRLLEKDIKNLQTSEI 60
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF- 132
+ + + PPCQ ++ G K DAR F + L L+ P ENV G
Sbjct: 61 N-FSVDGIIGGPPCQSWSEAGNLKGIDDARGQLFYEYLRLLREL--KPKFFLAENVRGML 117
Query: 133 -ETSDTHAK-MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ +T K ++ Y +++ +GV R R F + RK L
Sbjct: 118 AQRHETSVKNILNAFKECGYEVNTHLVNAKDYGVAQERLRVFYIGFRKDLK 168
>gi|421716580|ref|ZP_16155890.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
gi|407220104|gb|EKE89913.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
Length = 168
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPHFELIWANDIDKDAILSYQAN--HKEAQTILCDIVQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L VKP +F EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDL----VKPKIFVF-EN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPR 170
VVG S ++ + + N+ Y+ + IL+ L +GVP R R
Sbjct: 114 VVGL-MSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRER 158
>gi|227484740|ref|ZP_03915056.1| possible DNA (cytosine-5-)-methyltransferase [Anaerococcus
lactolyticus ATCC 51172]
gi|227237262|gb|EEI87277.1| possible DNA (cytosine-5-)-methyltransferase [Anaerococcus
lactolyticus ATCC 51172]
Length = 321
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA-----NDVYELNFGHRPYQGNIQNL 68
++LE + GIG +R + + + +VV+ +I DKA N +Y ++ + G
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEI-DKACVKSYNALYGEDYKPKSVVGYKAPN 63
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLF 125
+L M+G+ PCQ ++R G ++ ++S R+ + + +I + P +
Sbjct: 64 EQIDLVMHGS-------PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKEKPKWII 116
Query: 126 VENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
ENV G D+ ++ L + Y ++ IL+ + FG+P R R F ++ +F
Sbjct: 117 WENVKGVLDRNMRDSFFIYLKELEDLGYESKYEILNAMDFGIPQKRERIFVVSCLGANNF 176
Query: 183 RCQLLNNQLLRSPSPLLGND 202
L + R S L D
Sbjct: 177 SFNKLERKETRPLSEFLEKD 196
>gi|420502448|ref|ZP_15000989.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
gi|393153728|gb|EJC54021.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
Length = 351
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPHFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|423303334|ref|ZP_17281333.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T00C23]
gi|423307943|ref|ZP_17285933.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T12C37]
gi|392688295|gb|EIY81583.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T00C23]
gi|392688928|gb|EIY82211.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T12C37]
Length = 345
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 142/365 (38%), Gaps = 58/365 (15%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAEL- 73
++ +SG+GG+ L KA ++ AF+I++ A+ VY+LN + NI+N++ ++
Sbjct: 6 IDLFSGVGGLTQGLRKAGFQTKM--AFEIDELASSVYKLNHKRTKVITDNIRNVSTEKVK 63
Query: 74 -DMYGAHAWLLS--PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK-PPHMLFVENV 129
G LL+ PPCQ ++ + + + I E + V P+ +ENV
Sbjct: 64 KQFKGKTIHLLAGCPPCQGFSSIRRLNKPTPVKDDRNTLINEYVRFVVDLKPYTFMMENV 123
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR-KPLSFRCQLLN 188
G + ++ + Y T I++ ++GVP SR R + R P+
Sbjct: 124 PGLALDKSFEVALQTFESIGYFTDWRIVNVKEYGVPQSRKRLVLVGSRLAPIQIAHPTNK 183
Query: 189 NQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLS 248
+ +R I K P++ S DP+ + F Q+ +
Sbjct: 184 KKTVRQ-----------TIGKLPLPEN-------SDDPLHKI--FPTHTSQIKYFISQIP 223
Query: 249 TGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYR 308
+ D G +++ L ++ + VY + C T
Sbjct: 224 HNGGSRKDLGESQQ----------------LKCHQKENIGFNDVYGRLRWDDCSTTI--- 264
Query: 309 YVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYAL 368
TG L N K L + R + RE + L +FP ++ FP ++ + +
Sbjct: 265 ----TGGCL------NPSKGRFLHPEQNRCISAREASLLQTFPPNYIFPANIPRTKLALM 314
Query: 369 LGNSL 373
+GN+L
Sbjct: 315 IGNAL 319
>gi|312874669|ref|ZP_07734692.1| modification methylase HaeIII [Lactobacillus iners LEAF 2053A-b]
gi|311089796|gb|EFQ48217.1| modification methylase HaeIII [Lactobacillus iners LEAF 2053A-b]
Length = 331
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 11/172 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+++ +SG GG+ KA ++V A + + YE N R +G+I + + E
Sbjct: 2 KLISLFSGAGGLDLGFKKA--GYEIVAANEFDKTIWKTYEKNHATRLIKGDICKIPSDEF 59
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
+ PPCQ ++ G K +DAR F + + ++ K P ENV G
Sbjct: 60 PE--CDGIIGGPPCQSWSEAGSLKGINDARGQLFYQYIRILKD--KKPKFFLAENVKGM- 114
Query: 134 TSDTHAKMIEILA----NSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ H+ +E + + Y +L+ +GVP R R F + RK L+
Sbjct: 115 MAKRHSVAVENIVLQFEKAGYDVFIHLLNASDYGVPQDRKRVFYVGFRKDLN 166
>gi|170729237|ref|YP_001763263.1| DNA-cytosine methyltransferase [Shewanella woodyi ATCC 51908]
gi|169814584|gb|ACA89168.1| DNA-cytosine methyltransferase [Shewanella woodyi ATCC 51908]
Length = 416
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 31/185 (16%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE 72
++ ++ ++GIGG+R + D + FD + +A Y+ N G P+ ++TA
Sbjct: 96 FKFIDLFAGIGGVRLGFQQNDGACVFSSEFDKHAQAT--YQTNHGELPFG----DITAIN 149
Query: 73 LDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
H LL+ PCQP++ GL+ D R F I +I K P +ENV G
Sbjct: 150 PTHIPDHDVLLAGFPCQPFSHAGLKLGIEDTRGTLFHNIARIIEE--KQPKFALLENVKG 207
Query: 132 FETSD---THAKMIEILANSDY---LTQEFI----------------LSPLQFGVPYSRP 169
+ D T +++ L + Y +++E I + + FGVP +R
Sbjct: 208 LVSHDKGYTLKVILKTLTDIGYSCNISKELIEHGTAKQIQIEAKKMVMRSVDFGVPQNRQ 267
Query: 170 RYFCL 174
R + +
Sbjct: 268 RIYII 272
>gi|420423359|ref|ZP_14922432.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-4]
gi|393042639|gb|EJB43648.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-4]
Length = 351
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPHFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLISMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|167920593|ref|ZP_02507684.1| cytosine-specific DNA methylase [Burkholderia pseudomallei BCC215]
Length = 454
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+++R ++ ++G+GG +L + + V A + + D+YE+NFG RP +G+I ++
Sbjct: 2 KSFRFVDLFAGLGGFHLALQR--LGGTCVYAAEWQEHLRDLYEVNFGLRP-EGDITLISP 58
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
++ +H L + PCQP+++ G Q + + +E I K P +ENV
Sbjct: 59 KDVP---SHDVLTAGFPCQPFSKAGDQLGFECTKQGNLFFNVEAILKE-KMPRFFILENV 114
Query: 130 VGFETSD---THAKMIEILA----NSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
D T K+ E L Y + LSP FG+P R R + + +PL+
Sbjct: 115 PNLLKHDDGRTWEKIQEKLGLGPDGLGYHIRAEKLSPHNFGIPQIRERVYIVGSTEPLT 173
>gi|434390025|ref|YP_007125731.1| site-specific DNA methylase [Cylindrospermum stagnale PCC 7417]
gi|428262603|gb|AFZ28551.1| site-specific DNA methylase [Cylindrospermum stagnale PCC 7417]
Length = 419
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 141/399 (35%), Gaps = 95/399 (23%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ-GNIQNLTAAELD 74
+ +SG+GG A ++ A D N A Y+ NF H +I+ +T E+
Sbjct: 12 VSLFSGVGGFDLGFKAAGF--EIAIAIDNNPIALATYQHNFPHATVLCKDIREVTGEEIR 69
Query: 75 MY----------GAHAWLLSPPCQPYTRQGLQKQSSDARAF--SFLK-ILELIPHTVKPP 121
HA PPCQ ++ GLQ + + F++ +LEL P
Sbjct: 70 ACIQAKYINWDGEIHAVFGGPPCQGFSVAGLQNVEDERNSLVGEFVRLVLELNPLAA--- 126
Query: 122 HMLFVENVVGFETSD--THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKP 179
+ENV G E ++ + Y ++ L+ +GVP +R R F +A R
Sbjct: 127 ---IMENVPGIENQKFGCITANLQAVLEEHYFLSKWNLNASDYGVPQARKRVFFVASRFG 183
Query: 180 LSFRCQLLNNQLLR------SPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLE- 232
+ +R SP PLL + T+ PD W K ++LE
Sbjct: 184 EIIPPKHQPQHTVRDAIADLSPVPLLPKQN----TQEWHPD--WVK-----GEYAKYLEK 232
Query: 233 -FSNSGDQVNTETGFLSTGTAA------VDDFGAAEETVEVDRCVSIDHFLVPLSLIERW 285
F N N ETGF +T ++ A E + + D F V L R
Sbjct: 233 IFPNLSIVTNIETGFAATTHTPEVIQQFINTPPGAREAKSKSKKLQWDGFCVTL----RA 288
Query: 286 GSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVA 345
GS N+ L + R + RE A
Sbjct: 289 GSG-----------------------------------NRTALRPLHPEQPRVISVREAA 313
Query: 346 NLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQY 384
LHS+P F F + QR +GNS V PLL Y
Sbjct: 314 RLHSYPDWFNFSEAILHAQRE--IGNS-----VPPLLAY 345
>gi|420410013|ref|ZP_14909156.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4200]
gi|393028326|gb|EJB29412.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4200]
Length = 351
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 15/165 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPHFELIWANDIDKDAILSYQAN--HKETQTILCDIMQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPR 170
VVG + ++ Y+ + IL+ L +GVP R R
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRER 158
>gi|304390603|ref|ZP_07372556.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326359|gb|EFL93604.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 309
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 10/186 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNL--TAA 71
R ++ +SG GGM A VV A++ A VY NF H + ++ N+ +
Sbjct: 8 RCVDLFSGCGGMSLGFEMAGF--DVVAAYENWAPALRVYRANFDHPAVEQDLSNVAESVE 65
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
+ + + PPCQ ++ G Q ++ RA +K E+I ++P + + +ENV
Sbjct: 66 SITQFEPDLVIGGPPCQDFSTAGHQDETR-GRAILSVKFSEIIAD-IRPSYFV-MENVAT 122
Query: 132 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQL 191
+++ + + + + IL GVP SR R F + +K L+ +L
Sbjct: 123 IRNTESFRAALANFKKAGFGLTQTILDAAYCGVPQSRKRMFVVGGQKEDD---GFLDAEL 179
Query: 192 LRSPSP 197
R+ SP
Sbjct: 180 ERALSP 185
>gi|127440|sp|P24600.1|MTD1_HERAU RecName: Full=Modification methylase HgiDI; Short=M.HgiDI; AltName:
Full=Cytosine-specific methyltransferase HgiDI
gi|43482|emb|CAA38938.1| methyltransferase [Herpetosiphon aurantiacus]
Length = 309
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 13/169 (7%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE- 72
+ ++ ++G GGM M+A ++V A D A + Y+ NF H ++ ++ + AA
Sbjct: 2 KTIDLFAGCGGMSLGFMQAGF--EIVAAVDNWRPAINTYQQNFTHPIHELDLAQIDAAVS 59
Query: 73 -LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVEN 128
+ + + PPCQ ++ G ++ RA F KI+ I P + +EN
Sbjct: 60 LIKTHSPELIIGGPPCQDFSSAG-KRDEGLGRANLTLDFAKIVLAIQ-----PAWVIMEN 113
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
V S H + +L + Y + +L GVP R R F + R
Sbjct: 114 VERARLSKIHQQACSMLGDEGYSLAQVVLDASLCGVPQLRKRTFVIGHR 162
>gi|424902798|ref|ZP_18326311.1| product [Burkholderia thailandensis MSMB43]
gi|390930671|gb|EIP88072.1| product [Burkholderia thailandensis MSMB43]
Length = 457
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+++R ++ ++G+GG +L + + V A + + D+YE+NFG RP +G+I ++
Sbjct: 5 KSFRFVDLFAGLGGFHLALQR--LGGTCVYAAEWQEHLRDLYEVNFGLRP-EGDITLISP 61
Query: 71 AELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
++ +H L + PCQP+++ G Q + + +E I K P +ENV
Sbjct: 62 KDVP---SHDVLTAGFPCQPFSKAGDQLGFECTKQGNLFFNVEAILKE-KMPRFFILENV 117
Query: 130 VGFETSD---THAKMIEILA----NSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
D T K+ E L Y + LSP FG+P R R + + +PL+
Sbjct: 118 PNLLKHDGGRTWEKIQEKLGLGPDGLGYHIRAEKLSPHNFGIPQIRERVYIVGSTEPLT 176
>gi|408410143|ref|ZP_11181386.1| Cytosine-specific methyltransferase [Lactobacillus sp. 66c]
gi|407875697|emb|CCK83192.1| Cytosine-specific methyltransferase [Lactobacillus sp. 66c]
Length = 405
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAA 71
+ + F++G+GG+ + +VV A + + A YELN G +I +++
Sbjct: 11 YNIDAFFAGVGGIELGFTQTG-EFRVVYANEFDKNARITYELNNPETRLDGRDIHDVSPD 69
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131
E+ + PCQ ++ G +K D R F ++L++I K P ++FVENV
Sbjct: 70 EIP--DCDVIMGGFPCQAFSIAGYRKGFEDERGDLFFELLKMI--KAKKPRVVFVENVKN 125
Query: 132 FETSD---THAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
T D T + E LA + Y + +L+ +G VP +R R + +
Sbjct: 126 LVTHDHGNTFKVIREALAENGYFIKWKVLNSKDYGNVPQNRERIYMVG 173
>gi|260580130|ref|ZP_05847960.1| site-specific DNA-methyltransferase (cytosine-specific)
[Haemophilus influenzae RdAW]
gi|260093414|gb|EEW77347.1| site-specific DNA-methyltransferase (cytosine-specific)
[Haemophilus influenzae RdAW]
Length = 304
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 13/168 (7%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA-- 71
+ ++ +SG GG+ A ++ AF+ +KA ++Y+ NF H Y +++N A
Sbjct: 2 KCVDLFSGCGGLSLGFELAGF--EICAAFENWEKAIEIYKNNFSHPIYNIDLRNEKEAVE 59
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVEN 128
++ Y + PPCQ ++ G ++ S RA +SF I+ I P +EN
Sbjct: 60 KIKKYSPDLIMGGPPCQDFSSAG-KRDISLGRADLTYSFANIVCNIR-----PKWFVMEN 113
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
V + S +I + Y IL GVP SR R+F + K
Sbjct: 114 VEQIKKSHILQDIINQFIDFGYGLTSAILDASYCGVPQSRTRFFLIGK 161
>gi|406986027|gb|EKE06710.1| hypothetical protein ACD_18C00299G0002 [uncultured bacterium]
Length = 523
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQNLT 69
+ ++ ++ ++G+GG+R +A + V A D K D Y+LNF G + + +IQ L
Sbjct: 209 KKFKTIDLFAGVGGIRLGFEEA--GFETVFANDFEQKCKDTYDLNFDGTQLFVEDIQKLN 266
Query: 70 AAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSD--ARAFSFLKILELIPHTVKPPHMLFV 126
+L + +LL PCQ ++ G ++ D R F + +I K P +
Sbjct: 267 EKKLPDFD---FLLGGFPCQAFSIAGYREGFDDKKGRGNLFFDVARIIKE--KKPMGFML 321
Query: 127 ENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLAKR 177
ENV + D T +++ L + Y + +L+ +++G VP +R R + + R
Sbjct: 322 ENVKNLKNHDNGKTFKIILDTLESLGYHVKAKVLNSMEYGNVPQNRERIYIVGFR 376
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 333 EQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
++ +R TP E A + FP DF+ P ++S Y GNS+S+ VV + + +
Sbjct: 465 KKGIRKLTPLECARIQGFPMDFKLPANMSDSALYKQFGNSVSVPVVKAVAKQI 517
>gi|420463458|ref|ZP_14962236.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
gi|393080986|gb|EJB81711.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
Length = 160
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-STHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L VKP +F EN
Sbjct: 59 CHNLPCIPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDL----VKPKIFVF-EN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPR 170
VVG S ++ + + N+ Y+ + IL+ L +GVP R R
Sbjct: 114 VVGL-MSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRER 158
>gi|345851147|ref|ZP_08804129.1| DNA-cytosine methyltransferase [Streptomyces zinciresistens K42]
gi|345637376|gb|EGX58901.1| DNA-cytosine methyltransferase [Streptomyces zinciresistens K42]
Length = 414
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVV----EAFDINDKANDVYELNF----GHRPYQGNI 65
R ++ ++G GG+ + A + V A +++ A Y +NF G +QG+I
Sbjct: 12 RTIDLFAGCGGLTQGFIDAKCGGRPVYRPVAAVELDRAAAATYAVNFTEKFGAHIHQGDI 71
Query: 66 QNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
+ + A L PPCQ ++R G Q +DAR + L+++ TV+P M F
Sbjct: 72 ADWVDRPGGLPEADIVLGGPPCQGFSRLGNQ-DPNDARNQLWRHYLDVV-STVRP--MAF 127
Query: 126 V-ENVVGFETSDTHAKMIEILANSDYLTQEFI----LSPLQFGVPYSRPRYFCLAKRKPL 180
V ENV F S + + + L++ FI L+ +GVP R R + RK L
Sbjct: 128 VMENVDAFRNSPEFELLRREVRDGGALSEYFIYDDLLNAADYGVPQRRFRAIVVGIRKDL 187
>gi|224539035|ref|ZP_03679574.1| hypothetical protein BACCELL_03935 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519363|gb|EEF88468.1| hypothetical protein BACCELL_03935 [Bacteroides cellulosilyticus
DSM 14838]
Length = 345
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 8/168 (4%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAEL- 73
++ +SG+GG+ L KA ++ AF+I++ A+ VY+LN + NI+N++ ++
Sbjct: 6 IDLFSGVGGLTQGLRKAGFQTKM--AFEIDELASSVYKLNHKRTKVITDNIRNVSTEKVK 63
Query: 74 -DMYGAHAWLLS--PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK-PPHMLFVENV 129
G LL+ PPCQ ++ + + + I E + V P+ +ENV
Sbjct: 64 KQFKGKTIHLLAGCPPCQGFSSIRRLNKPTPVKDDRNTLINEYVRFVVDLKPYTFMMENV 123
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
G + ++ + Y T I++ ++GVP SR R + R
Sbjct: 124 PGLALDKSFEVALQTFESIGYFTDWKIVNVKEYGVPQSRKRLVLVGSR 171
>gi|416170631|ref|ZP_11608383.1| modification methylase EcoRII [Neisseria meningitidis OX99.30304]
gi|325130344|gb|EGC53110.1| modification methylase EcoRII [Neisseria meningitidis OX99.30304]
Length = 337
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 149/396 (37%), Gaps = 98/396 (24%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNI--- 65
+ E + ++ ++GIGG R ++ +V + V + + +DKA Y++NF PY G+I
Sbjct: 16 NNEKFTFIDLFAGIGGFRIAM--ENVGGRCVFSSEWDDKARQTYQVNFNDIPY-GDITLK 72
Query: 66 --QNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFL---------KILELI 114
+ ++ D+ A PCQP++ G+ K+ S R FL + E+I
Sbjct: 73 ETKAAIPSKFDVLTAGF-----PCQPFSIAGVSKKKSLGRETGFLDKAQGTLFFDVAEII 127
Query: 115 -PHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFC 173
H K + V+N+V + +T + L DY +++ ++ VP +R R F
Sbjct: 128 GKHRPKIFLLENVKNLVSHDKGNTFKVIKGTLEELDYQIFYQVMNA-KYYVPQNRERIFI 186
Query: 174 LAKRKPLSFRCQLLNNQL-LRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLE 232
+ F Q N ++ PSP + I +D D D + +L+
Sbjct: 187 VG------FDRQYFNKEINFNFPSPPESQPKLKQIL-----EDDVDNSFTLSDNLWLYLQ 235
Query: 233 FSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIV 292
+ A + FG LV L I R SA
Sbjct: 236 ------------NYAKKHKAKGNGFGFG---------------LVDLDGISRTLSA---- 264
Query: 293 YPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPG 352
RY K +L + KN R TPRE + L FP
Sbjct: 265 ---------------RYYKDGSEILIPQKGKNP-----------RKLTPRECSRLMGFPK 298
Query: 353 DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
DF +S Y GNS+++ PL+Q + Q
Sbjct: 299 DFVI-DAVSKTAAYKQFGNSIAV----PLVQAISKQ 329
>gi|218134306|ref|ZP_03463110.1| hypothetical protein BACPEC_02199 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991681|gb|EEC57687.1| DNA (cytosine-5-)-methyltransferase [[Bacteroides] pectinophilus
ATCC 43243]
Length = 622
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 3 KDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPY 61
K K + +R+L+ +SG GGM Y + K + V A D N+KA ++ N
Sbjct: 260 KQPMKEETPMFRILDLFSGAGGMSYGMEKNEHFTTEV-ALDFNEKALQTFKHNMPDTETV 318
Query: 62 QGNI--QNLTAAELDMYGA---HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPH 116
G+I + + A +++ A + + PPCQ ++ +G + D R F F + L +
Sbjct: 319 CGDITDEKIKAKVIELCKAKKVNMIIGGPPCQGFSLKGKKLGLDDPRNFLFNEYLRFV-- 376
Query: 117 TVKPPHMLFVENVVGFETSDT---HAKMIEILANSDYLTQEFILSPLQFGVPYSRPR-YF 172
+ P + +ENV ++ ++I+ + Y + +L+ FGVP +R R F
Sbjct: 377 EILKPEVFVIENVKALLSTSAGWFKDQIIKKVTEMGYHVEYGVLTASDFGVPQARQRAIF 436
Query: 173 CLAKRKPL 180
+K K +
Sbjct: 437 ICSKNKSI 444
>gi|419271860|ref|ZP_13814174.1| C-5 cytosine-specific DNA methylase family protein [Escherichia
coli DEC10D]
gi|378120376|gb|EHW81855.1| C-5 cytosine-specific DNA methylase family protein [Escherichia
coli DEC10D]
Length = 259
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 11/173 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSA--QVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+RV++ + G GG+ Y + ++S + + A D N A + Y NFG Q NI+ +
Sbjct: 7 FRVIDLFCGAGGLSYGFLHGEMSDYFESILAIDNNAAAINTYNANFGLHGVQANIEEWAS 66
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAF--SFLKILELIPHTVKPPHMLFVEN 128
+ + A + PPCQ ++ + RA ++ ++E M +EN
Sbjct: 67 SNT-VPEADVVIGGPPCQGFSLLNKNRYGDHRRALWEPYMDVIERSRAC-----MFVMEN 120
Query: 129 VVGFETSDTHAKMIEILANSDY-LTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
V G SD A + + + L +L+ +GVP +R R + ++ L
Sbjct: 121 VPGLLISDEFADITFRAKSMGFILLNPMVLNTADYGVPQTRKRTIAIGIKREL 173
>gi|294673665|ref|YP_003574281.1| prophage PRU01 DNA methylase, C-5 cytosine-specific family
[Prevotella ruminicola 23]
gi|294471747|gb|ADE81136.1| prophage PRU01, DNA methylase, C-5 cytosine-specific family
[Prevotella ruminicola 23]
Length = 330
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 147/378 (38%), Gaps = 81/378 (21%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP----YQGNIQNLT 69
+V+ +SG GG+ +A V FD + ++E + P +G+I+N+
Sbjct: 2 KVISLFSGCGGLDLGFERAGFEVPVANEFDPS-----IWETFEANHPKTKLIRGDIRNIK 56
Query: 70 AAEL--DMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHML 124
++ D+ G + PPCQ ++ G + DAR F +++IL+ + P
Sbjct: 57 ESDFPKDVDGI---IGGPPCQSWSEAGSLRGIEDARGQLFFDYIRILQEV-----KPKFF 108
Query: 125 FVENVVGFETSDTHAKMIEILAN----SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
ENV G +D H+ ++ + N S Y +++ +GV R R F + R L
Sbjct: 109 LAENVSGM-LADRHSGAVQNILNMFKESGYNVSLTLVNAKDYGVAQERKRVFYIGFRNDL 167
Query: 181 SFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSG-DQ 239
+ + DD IT D WD L +S P LE ++ +
Sbjct: 168 NIDFKFPEGST---------RDDKKKITLRDI---IWD-LKDSAVPA---LEKNHHNPEA 211
Query: 240 VNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDH--FLVPLSLIERWGSAMDIVYPDSK 297
+N F+ + + +R + D F V S G + +P +
Sbjct: 212 INNNEYFIGAYSTIY---------MSRNRVKAWDEQGFTVQAS-----GRQCQL-HPQAP 256
Query: 298 RCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFP 357
+ F + R+V+G KE R T REVA + FP F+F
Sbjct: 257 KMIKFDTNDCRFVEG-------------------KEHLYRRMTVREVARVQGFPDSFKFI 297
Query: 358 HHLSLRQRYALLGNSLSI 375
+ + Y ++GN++ +
Sbjct: 298 YD-KVDNAYKMIGNAVPV 314
>gi|227112465|ref|ZP_03826121.1| putative C-5 cytosine-specific DNA methylase [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 390
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 32/203 (15%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF--GHR--------PYQG 63
+ ++ ++G GG S ++A V V+ A + + A + Y NF G + P +G
Sbjct: 4 KAIDLFAGAGGFTLSAIEAGVD--VIAAVEFDKSAAETYRKNFIEGKKRKIELRSGPQKG 61
Query: 64 NIQNLT------AAELDMYGAHAWLLSPPCQPYTRQGLQKQS-SDARAFSFLKILELIPH 116
+I N+T + EL+ L PPCQ ++ ++ D R LK E + H
Sbjct: 62 DINNITPLELRQSLELERGELDIILGGPPCQGFSTHRIKNAGVDDPRNALLLKYFEFV-H 120
Query: 117 TVKPPHMLFVENVVGF---ETSDTHAKMIEILANSDY-LTQEFILSPLQFGVPYSRPRYF 172
+P L VENV G + I++ NS Y L I++ + +GVP +R R F
Sbjct: 121 EFQPKAFL-VENVTGLLWKRHEKYFHQFIDLAQNSHYTLKFSNIINAVDYGVPQNRKRVF 179
Query: 173 CLAKRKPLSFRCQLLNNQLLRSP 195
+ LNN ++ P
Sbjct: 180 IFGIH-------EDLNNSTIKFP 195
>gi|421733472|ref|ZP_16172577.1| DNA-cytosine methyltransferase [Bifidobacterium bifidum LMG 13195]
gi|407078611|gb|EKE51412.1| DNA-cytosine methyltransferase [Bifidobacterium bifidum LMG 13195]
Length = 449
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 146/391 (37%), Gaps = 72/391 (18%)
Query: 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQN 67
DG +R ++ ++GIGG+R A VV + + N+ + Y N+G G+I
Sbjct: 76 DGTDFRAIDLFAGIGGIRRGF--ASAGGHVVFSSEWNEFSTRTYRTNYGFAETMAGDITQ 133
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS---------FLKILELIPHTV 118
+ D+ L PCQP++ G+ K+ S R F + +I
Sbjct: 134 VDVD--DIPDCDVVLAGFPCQPFSLAGVSKKRSLGRETGFRDKTQGTLFFDVARII--AA 189
Query: 119 KPPHMLFVENVVGFETSD---THAKMIEILANS-DYLTQEFILSPLQFGVPYSRPRYFCL 174
K P +ENV + D T +++ L N Y ++ F VP R R + +
Sbjct: 190 KRPAAFLLENVKNLTSHDKGRTFQVILDALQNELGYEVHWKVIDGQNF-VPQHRERIYIV 248
Query: 175 AKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFS 234
R F L P+L D+ T +P WD +R+ F
Sbjct: 249 GFRSHTDFTWDDLK---FPERKPVLA--DILHKTDGAEPYLPWDG--------DRY--FD 293
Query: 235 NSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYP 294
+ ++V + + ++ A E + + LV +++ R SA
Sbjct: 294 HERNKVQDKYTLTPRLWQYLQEYKAKHEAM----GHGFGYGLVTPNMVSRTLSA------ 343
Query: 295 DSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDF 354
RY K +L + +++ R TPRE A L +P DF
Sbjct: 344 -------------RYHKDGSEILV-----------AQEDERPRRLTPRECARLMGYPDDF 379
Query: 355 QFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 385
+ P +S Q Y GNS+ + +A + + +
Sbjct: 380 RIP--VSDTQAYRQFGNSVVVPAIAEIARIM 408
>gi|420519255|ref|ZP_15017699.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-5b]
gi|393128347|gb|EJC28791.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-5b]
Length = 351
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-STHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALK 166
>gi|376259604|ref|YP_005146324.1| DNA-methyltransferase Dcm [Clostridium sp. BNL1100]
gi|373943598|gb|AEY64519.1| DNA-methyltransferase Dcm [Clostridium sp. BNL1100]
Length = 385
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 88/224 (39%), Gaps = 25/224 (11%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSA----------QVVEAFDINDKANDVYELNFGHRP 60
+ + V+ +SG GG + D + ++ A DI A + Y+ NF H
Sbjct: 54 KVFTVVSLFSGCGGKDLGF-RGDFAVFGKHYERNNFNIIWANDIESHACETYKHNFKHDI 112
Query: 61 YQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP 120
+I+N+ + A + PCQ ++ GL+K S R +L++ +I H
Sbjct: 113 VCNDIKNVDINTIPK--ADIVIGGFPCQDFSIAGLRKGLSSERGQLYLEMKRVIEHC--Q 168
Query: 121 PHMLFVENVVGFETSDTHAKMIEIL----ANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
P ENV G + + IE++ A Y + +GVP +R R F +
Sbjct: 169 PLAFIAENVEGLTNINGSNETIELIKEDFAKCGYNVTYNLFHATDYGVPQTRKRVFIIGI 228
Query: 177 RKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKL 220
R+ L L P + D +T + DD W KL
Sbjct: 229 REDLH------KTIYLPKPDRDQFSKDRPWMTAKEAIDDLWGKL 266
>gi|300813808|ref|ZP_07094115.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus sp. oral taxon
836 str. F0141]
gi|300512098|gb|EFK39291.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus sp. oral taxon
836 str. F0141]
Length = 321
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA-----NDVYELNFGHRPYQGNIQNL 68
++LE + GIG +R + + + +VV+ +I DKA N +Y ++ + G
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEI-DKACVKSYNALYGEDYKAKSVVGYKAPN 63
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLF 125
+L M+G+ PCQ ++R G ++ ++S R+ + + +I + P +
Sbjct: 64 ENIDLVMHGS-------PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKEKPKWII 116
Query: 126 VENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
ENV G D+ ++ L Y ++ IL+ + FG+P R R F ++ +F
Sbjct: 117 WENVKGVLDRNMRDSFFIYLKELEELGYESKYEILNAMDFGIPQKRERIFVVSCLGANNF 176
Query: 183 RCQLLNNQLLRSPSPLLGND 202
L + R S L D
Sbjct: 177 SFNKLERKETRPLSEFLEKD 196
>gi|225076313|ref|ZP_03719512.1| hypothetical protein NEIFLAOT_01354 [Neisseria flavescens
NRL30031/H210]
gi|224952437|gb|EEG33646.1| hypothetical protein NEIFLAOT_01354 [Neisseria flavescens
NRL30031/H210]
Length = 359
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 4 DMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG 63
DM ++ E + ++ ++GIGG R ++ + + + + + +DKA Y NFG P+ G
Sbjct: 30 DMAES--EKFTFIDLFAGIGGFRIAMQ--SLGGKCLFSSEWDDKAQQTYAANFGEIPF-G 84
Query: 64 NI-----QNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTV 118
+I ++ E D+ A PCQ ++ G + D R F + E+I
Sbjct: 85 DITTEETKSHIPKEFDILCA-----GFPCQAFSIAGKRGGFEDTRGTLFFDVAEIIKR-- 137
Query: 119 KPPHMLFVENVVGFETSDTHAKMIEILANS------DYLTQEFILSPLQFGVPYSRPRYF 172
P +ENV G + D K ++ + N+ ++ I++ FGVP +R R F
Sbjct: 138 HQPKAFLLENVKGLISHD-KGKTLQTILNTLREDLGYFVPDPEIINAKDFGVPQNRERIF 196
Query: 173 CLA 175
+
Sbjct: 197 IVG 199
>gi|388543421|ref|ZP_10146712.1| cytosine-specific methyltransferase [Pseudomonas sp. M47T1]
gi|388278733|gb|EIK98304.1| cytosine-specific methyltransferase [Pseudomonas sp. M47T1]
Length = 360
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 133/372 (35%), Gaps = 59/372 (15%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELN-FGHRPYQGNIQNLTAAEL 73
++ + G GG+ L+ + ++ V D + +E N G + ++ +LT EL
Sbjct: 7 AVDLFCGAGGLTRGLLNSGIN--VTHGVDFDPACTYAFEHNNSGAKFVNKSVTDLTGNEL 64
Query: 74 DMY--GAHAWLLS--PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
+ + G LL+ PCQP+++ ++S+D + L + KP ++ +ENV
Sbjct: 65 NNWFGGQEIKLLAGCAPCQPFSKYSSTRKSNDDDKWKLLNEFRRLISETKP-ELVTMENV 123
Query: 130 VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 189
T + + K + L S Y ++S Q+G+P R R LA
Sbjct: 124 PQLRTHEIYLKFVSFLKVSGYHVDFKVVSCAQYGLPQMRKRLVLLAS------------- 170
Query: 190 QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249
+LG +E P F++ D + LS
Sbjct: 171 --------MLGP-------------------IEIIPPTHSSGNFTSVRDAIK-HLPRLSA 202
Query: 250 GTAAVDD---FGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 306
G DD + A+ + + R + P W + K + Y
Sbjct: 203 GEQDPDDPLHYSASLSQINLQRIIRSS----PGGTWRDWPEHLRAPCHSKKSGSTYASVY 258
Query: 307 YRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQF---PHHLSLR 363
R S T Q G + R + RE A L SFP D+ F +S R
Sbjct: 259 GRMEWDKPSPTITTQSYGYGNGRFGHPEQNRALSLREAAILQSFPDDYSFYEPGTDMSTR 318
Query: 364 QRYALLGNSLSI 375
++GN++ +
Sbjct: 319 ALCTMIGNAVPV 330
>gi|420435793|ref|ZP_14934792.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-27]
gi|420492530|ref|ZP_14991104.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-15]
gi|420506345|ref|ZP_15004860.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-74]
gi|420526553|ref|ZP_15024954.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-15b]
gi|393051652|gb|EJB52603.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-27]
gi|393106969|gb|EJC07512.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-15]
gi|393115850|gb|EJC16360.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-74]
gi|393131858|gb|EJC32281.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-15b]
Length = 351
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y A +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SAHPHFELIWANDIDKDAILSYQAN--HKEAQTILCDIMQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +G P R R + K
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGAPQIRERVILVGALK 166
>gi|269122950|ref|YP_003305527.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
gi|268314276|gb|ACZ00650.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
Length = 328
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 15/176 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA-- 71
+++ +SG GG+ KA +V A + + + YE N +G+I N+ ++
Sbjct: 2 KIISLFSGAGGLDLGFKKAGFD--IVAANEFDKTIWETYEKNHKTHLIKGDICNIHSSMF 59
Query: 72 -ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
E D + PPCQ ++ G K D R F + + ++ K P ENV
Sbjct: 60 PECD-----GIIGGPPCQSWSEAGSLKGIEDPRGQLFYQYIRILKE--KQPKFFLAENVK 112
Query: 131 GFET---SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
G + +D ++ + Y +L+ +GVP R R F + RK L+ +
Sbjct: 113 GMMSKRHNDAVKNIVSQFEEAGYDVYIHLLNASDYGVPQDRKRVFYIGFRKDLNIK 168
>gi|330797774|ref|XP_003286933.1| hypothetical protein DICPUDRAFT_150953 [Dictyostelium purpureum]
gi|325083099|gb|EGC36561.1| hypothetical protein DICPUDRAFT_150953 [Dictyostelium purpureum]
Length = 58
Score = 54.7 bits (130), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 8 NDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA 48
ND E RVLEFYSGIGGM Y L ++ V +VV++FDIN A
Sbjct: 13 NDEEELRVLEFYSGIGGMHYGLKESGVKFEVVQSFDINTNA 53
>gi|420485505|ref|ZP_14984123.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4]
gi|420515995|ref|ZP_15014458.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4c]
gi|420517700|ref|ZP_15016154.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4d]
gi|393103640|gb|EJC04203.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4]
gi|393123199|gb|EJC23668.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4d]
gi|393124294|gb|EJC24762.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4c]
Length = 351
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPHFELIWANDIDKDAILSYQAN--HKEAQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|420449975|ref|ZP_14948841.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
gi|393069292|gb|EJB70090.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
Length = 348
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 151/390 (38%), Gaps = 63/390 (16%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SIHPYFELIWANDIDRDAILSYQAN--HKEAQTILCDIAQLN 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFEN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 184
VVG S ++ + + N+ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGL-MSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFK--- 169
Query: 185 QLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTET 244
Q P P I H D+ L P++ +GD +
Sbjct: 170 -----QKFHFPKP---------IKTHFSLKDALGDL----PPIQS----GENGDAL---- 203
Query: 245 GFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTK 304
G+L +F + + + L+ + + G + D + P+S R K
Sbjct: 204 GYLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDL-PESLR----PK 258
Query: 305 SYY--RYVKGTGSLLATVQPKNKGKASSLKEQH---LRYFTPREVANLHSFPGDFQFPHH 359
S Y Y K A +N SS + H R + RE A L SFP +++F
Sbjct: 259 SGYINTYAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGS 318
Query: 360 LSLRQRYALLGNSLSIAVVAPLLQYLFAQA 389
S ++ +GN+ V PLL AQA
Sbjct: 319 ASAKRLQ--IGNA-----VPPLLSVALAQA 341
>gi|420483743|ref|ZP_14982373.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-3]
gi|420514098|ref|ZP_15012571.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-3b]
gi|393102968|gb|EJC03532.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-3]
gi|393158561|gb|EJC58821.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-3b]
Length = 203
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-STHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALK 166
>gi|420530985|ref|ZP_15029360.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-28b]
gi|393139011|gb|EJC39392.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-28b]
Length = 351
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-STHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|332668060|ref|YP_004450848.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
gi|332336874|gb|AEE53975.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
Length = 395
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 33/218 (15%)
Query: 17 EFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG--HRPYQ-GNIQNLTAAEL 73
EF++GIG MR L +A ++ A DI+ + +Y+ +F +Q G+I L E+
Sbjct: 15 EFFAGIGLMRLGLEQA--GWEITYANDIDPIKDKIYQNHFQDPQNHFQLGDIHQLDVKEI 72
Query: 74 DMYGAHAWLLSPPCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129
S PC + R+GL ++S A + F+K+L+ + + + P ++ +ENV
Sbjct: 73 PYVTLAT--ASFPCTDLSLAGRREGLVGKNSSA-YWGFIKVLKEMGN--RRPRLILLENV 127
Query: 130 VGFETSDTHAKMIEIL--ANS-DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
GF TS+ E L NS Y F++ +F VP SR R F + K P++
Sbjct: 128 EGFLTSNKGEDFKEALLALNSLGYSVDAFVIDAAKF-VPQSRVRLFVVGKLTPVT----- 181
Query: 187 LNNQLLRSP------SPLLGNDDMTVITKHDQPDDSWD 218
+ L++SP S L + I H P+ +WD
Sbjct: 182 --HNLVKSPQLSFYQSELRTHRLADFILNH--PEINWD 215
>gi|420438503|ref|ZP_14937477.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-29]
gi|393056103|gb|EJB57015.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-29]
Length = 351
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-STHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|343520520|ref|ZP_08757489.1| modification methylase HpaII [Parvimonas sp. oral taxon 393 str.
F0440]
gi|343397478|gb|EGV10012.1| modification methylase HpaII [Parvimonas sp. oral taxon 393 str.
F0440]
Length = 346
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 15/177 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKA---DVSAQVVEAFDINDKANDVYELNFGHR-PYQGNIQNL 68
++ ++ ++GIGG+R +A ++ + +D +KA + Y+ NF G+I +
Sbjct: 2 YKSIDLFAGIGGIRLGFDQAFGKNIKTVFISEWD--EKAVETYKANFNDSIDVVGDITKV 59
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
E D+ L PCQ ++ G ++ DAR F + +I P ++F EN
Sbjct: 60 D--EKDIPDHDILLAGFPCQAFSLAGHKRGFEDARGTLFFDVARIIKE--HKPKIVFCEN 115
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
V D + +++ N+ Y +L+ FGVP +R R + +A R ++
Sbjct: 116 VKNLVNHD-RGRTFQVIRNTLEELGYAVFYQVLNSKDFGVPQNRERIYIVAFRNDIA 171
>gi|313677762|ref|YP_004055758.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
gi|312944460|gb|ADR23650.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
Length = 378
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 103/254 (40%), Gaps = 40/254 (15%)
Query: 14 RVLEFYSGIGGM------RYSLMKADVSA---QVVEAFDINDKANDVYELNFGHRPYQGN 64
+ F+ G GGM ++ + + S+ ++V A D + A ++Y NF H+ +
Sbjct: 11 KAASFFCGCGGMDLGLVGNFNYLNGNYSSLPFEIVYANDFDTYATEIYNSNFEHKCITKD 70
Query: 65 IQNLTAAELDMYGAHAWLLSP-PCQPYT-------RQGLQKQSSDARAFSFLKILELIPH 116
I++++ +E+ H LL PCQ ++ R G + D R F +++ ++ +
Sbjct: 71 IKDVSMSEIP---EHDILLGGFPCQSFSISAQNPPRLGYK----DERGLLFFEMVNILKN 123
Query: 117 TVKPPHMLFVENVVGFETSDTHAK---MIEILANSDYLTQEFILSPLQFGVPYSRPRYFC 173
K P ENV G +++ +I+ + Y + + + ++GVP R R F
Sbjct: 124 --KQPRFFIAENVKGILSANKKKAFPMIIKEFEKAGYHVKYQLFNASEYGVPQKRERVFI 181
Query: 174 LAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMT----VITKHDQPDDSWDKLLESCDPVER 229
+ + F P P ND VI K D+ W + D + R
Sbjct: 182 IGFKNYEDF-------AYFNFPQPTTLNDSKVKLKEVIDKKANKDEKWFFSQRAVDGMMR 234
Query: 230 FLEFSNSGDQVNTE 243
+ N G N E
Sbjct: 235 VQKKMNKGRDQNLE 248
>gi|410418275|ref|YP_006898724.1| hypothetical protein BN115_0466 [Bordetella bronchiseptica MO149]
gi|408445570|emb|CCJ57222.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
Length = 383
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 17 EFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG--HRPYQGNIQNLTAAELD 74
EF++G G R L D + + + A D + K Y+ N+G G++ + A +L
Sbjct: 6 EFFAGGGMARAGL---DSAWECLFANDFDYKKGMTYQANWGTGGELQIGDVNAVRAVDLP 62
Query: 75 MYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVG 131
Y W S PCQ + G R+ + F KI+E + + P ++ +ENV+G
Sbjct: 63 GYADLVWG-SFPCQDLSLAGGGAGLKGERSGTFYPFWKIVEDLAAAGRAPKIVALENVLG 121
Query: 132 FETSDTHA-----KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
TS HA + +LA + Y +++ F VP SRPR F + R+ ++ L
Sbjct: 122 TLTS--HAGKDFDAICRVLAKAGYRYGALVINASLF-VPQSRPRLFIIGIREDVAIPSAL 178
Query: 187 LNNQLLRSPSPL 198
L +P PL
Sbjct: 179 L------TPEPL 184
>gi|386745963|ref|YP_006219180.1| type II DNA modification (methyltransferase) [Helicobacter pylori
HUP-B14]
gi|384552212|gb|AFI07160.1| type II DNA modification (methyltransferase) [Helicobacter pylori
HUP-B14]
Length = 351
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y ++V A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPHFELVWANDIDKDAILSYQAN--HKEAQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQMRERVILVGALK 166
>gi|325849320|ref|ZP_08170737.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480182|gb|EGC83251.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 321
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA-----NDVYELNFGHRPYQGNIQNL 68
++LE + GIG +R + + + +VV+ +I DKA N +Y ++ + G
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEI-DKACVKSYNALYGEDYKAKSVVGYKAPN 63
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLF 125
+L M+G+ PCQ ++R G ++ ++S R+ + + +I P +
Sbjct: 64 EKIDLIMHGS-------PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKDMKDKPKWII 116
Query: 126 VENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
ENV G D+ ++ L + Y ++ IL+ + FG+P R R F ++ +F
Sbjct: 117 WENVKGVLDRNMRDSFFIYLKELESLGYESKYEILNAMDFGIPQKRERIFVVSCLGANNF 176
Query: 183 RCQLLNNQLLRSPSPLLGND 202
L + R S L D
Sbjct: 177 SFNKLERKETRPLSEFLEKD 196
>gi|322514130|ref|ZP_08067198.1| modification methylase NgoPII [Actinobacillus ureae ATCC 25976]
gi|322120016|gb|EFX92002.1| modification methylase NgoPII [Actinobacillus ureae ATCC 25976]
Length = 356
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 139/374 (37%), Gaps = 73/374 (19%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQNLTAA- 71
+V+ + G GG+ KA V +D A ++ N R +G+I+N+
Sbjct: 2 KVISLFCGCGGLDLGFEKAGFEVPVANEYDKTIWA--TFKANHPKTRLIEGDIRNIKEED 59
Query: 72 ---ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLF 125
E+D + PPCQ ++ G + DAR F +++IL+ K P
Sbjct: 60 FPDEID-----GIIGGPPCQSWSEAGALRGIDDARGQLFFDYIRILK-----SKQPKFFL 109
Query: 126 VENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
ENV G S+ ++++ Y +++ +GV R R F + RK L
Sbjct: 110 AENVSGMLANRHSEAVQNLLKMFDECGYDVTLTMVNAKDYGVAQERKRVFYIGYRKDLGI 169
Query: 183 RCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQ-VN 241
+ P +DD + K D WD L ++ P LE + + Q VN
Sbjct: 170 DFEF--------PVGSTIDDDKKISLK----DIIWD-LKDTAVPA---LERNQTNPQAVN 213
Query: 242 TETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCC 301
F TG S + + ++ W V ++C
Sbjct: 214 NNEYF--TG--------------------SFSPIFMSRNRVKAWHEQGFTVQASGRQCQL 251
Query: 302 FTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLS 361
++ GT N + + KE R T REVA + FP DF+F + +
Sbjct: 252 HPQAPKMEKHGT----------NDYRFVAGKENLYRRMTIREVARIQGFPDDFKFIYK-N 300
Query: 362 LRQRYALLGNSLSI 375
Y ++GN++ +
Sbjct: 301 TNDAYKMIGNAVPV 314
>gi|15611502|ref|NP_223153.1| type II DNA modification (methyltransferase [Helicobacter pylori
J99]
gi|4154963|gb|AAD06007.1| TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) [Helicobacter
pylori J99]
Length = 351
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-STHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L+IL+L+ P + EN
Sbjct: 59 CHNLPRVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALK 166
>gi|86151502|ref|ZP_01069717.1| type II DNA-methyltransferase [Campylobacter jejuni subsp. jejuni
260.94]
gi|85841849|gb|EAQ59096.1| type II DNA-methyltransferase [Campylobacter jejuni subsp. jejuni
260.94]
Length = 187
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 12/174 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQNLTAA 71
+++L+ + G GG + + + + + D N A + ++ N + G++++
Sbjct: 3 FKILDLFCGAGGFSNGFEQNE-NFKTIIGVDFNKFALETFKYNHPDSKVICGDLKDALVK 61
Query: 72 -----ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126
E G + + PPCQ ++ +G D R F F + LE++ + P + +
Sbjct: 62 SYIIDEAQKNGINMIIGGPPCQGFSSKGKNLGLQDERNFLFKEYLEIVK--IIKPDIFII 119
Query: 127 ENVVGFETSDTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
ENV T + + EI + DY + +L+ L FGVP +R R F +A +
Sbjct: 120 ENVKNLITCENSYFLNEIKKEIKKLDYKLEFKVLNALDFGVPQNRQRAFLIASK 173
>gi|293417389|ref|ZP_06660013.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185]
gi|291430909|gb|EFF03905.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185]
Length = 345
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 8/176 (4%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
A +V++ + G GG+ + L +A + VV DI YE N + +I +T
Sbjct: 2 AVKVVDLFCGAGGLTHGLKQAGL--DVVAGIDIESACRVAYESNNSALFIEKDISLVTKD 59
Query: 72 EL-DMY-GAHAWLLS--PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
EL D++ GA +L+ PCQP++R + + + + L E + V P ++ +E
Sbjct: 60 ELNDLFEGAQVRVLAGCAPCQPFSRYTQGRDKKNDKKWPLLYEFERLIRGVN-PEIVTME 118
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR-KPLSF 182
NV ++ L Y + + +GVP +R R+ LA + PLSF
Sbjct: 119 NVPDVTKHSVYSDFYNSLEALGYHVWAGKVECVDYGVPQNRVRHVLLASKFAPLSF 174
>gi|282883032|ref|ZP_06291633.1| type II restriction-modification system methylation subunit
[Peptoniphilus lacrimalis 315-B]
gi|281297089|gb|EFA89584.1| type II restriction-modification system methylation subunit
[Peptoniphilus lacrimalis 315-B]
Length = 312
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 19/173 (10%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA-----NDVYELNFGHRPYQGNIQNL 68
++LE + GIG +R + + + +VV+ +I DKA N +Y N+ + G
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEI-DKACVKSYNALYGENYKPKSVVGYKAPN 63
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLF 125
+L M+G+ CQ ++R G ++ ++S R+ + + +I P +
Sbjct: 64 EKIDLIMHGS-------SCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKDKPKWII 116
Query: 126 VENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
ENV G D+ ++ L N Y ++ IL+ + FG+P R R F ++
Sbjct: 117 WENVKGILDRNMRDSFFIYLKELENLGYESKYEILNAVDFGIPQKRERIFVVS 169
>gi|419346659|ref|ZP_13888030.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC13A]
gi|378184606|gb|EHX45242.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC13A]
Length = 432
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 20/168 (11%)
Query: 18 FYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYG 77
F++GIGG + A + ++N + E ++ P G+IQ+L A D+
Sbjct: 13 FFAGIGGFDLAFENAGFTTNF--QCELNKFCVRILEEHWPDVPRYGDIQSLDAK--DIPD 68
Query: 78 AHAWLLSPPCQPYT-------RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
A W PCQ + R GL+ ++S F F+ ++E K P ++ +ENV
Sbjct: 69 ASVWCGGFPCQDVSVARGSKGRLGLKGKNS-GLFFPFINLIE-----AKRPQVVLLENVT 122
Query: 131 GFETSDTHAK---MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
G +S ++E L + Y+ +++ FG P SRPR F A
Sbjct: 123 GLLSSHNGQDFRVILERLTSLGYVVSWRVMNSRFFGAPQSRPRVFICA 170
>gi|327399867|ref|YP_004346898.1| cytosine-specific methyltransferase [Lactobacillus amylovorus GRL
1112]
gi|327182537|gb|AEA32972.1| cytosine-specific methyltransferase [Lactobacillus amylovorus GRL
1112]
Length = 401
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 10/168 (5%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG-NIQNLTAA 71
+ + F++G+GG+ K +VV A + + A Y N P G +I ++ +
Sbjct: 10 YTIDAFFAGVGGIELGF-KQTGEFRVVYANEFDKNARKTYAENNPETPLDGRDIHDVKSD 68
Query: 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-- 129
E+ ++ + PCQ ++ G +K D R F ++L +I K P ++F+ENV
Sbjct: 69 EIP--DSNVIMGGFPCQAFSIAGYRKGFEDDRGDLFFELLRMI--NAKRPRVIFIENVKN 124
Query: 130 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 175
V + +T + E L +DY + +L+ +G +P +R R + +
Sbjct: 125 LVSHDHGNTFKVIREALVENDYYIKWKVLNGKDYGNIPQNRERIYVVG 172
>gi|432502767|ref|ZP_19744511.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE216]
gi|433108480|ref|ZP_20294427.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE148]
gi|431025031|gb|ELD38149.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE216]
gi|431622076|gb|ELI90861.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE148]
Length = 436
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 20/168 (11%)
Query: 18 FYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYG 77
F++GIGG + A + ++N + E ++ P G+IQ+L A D+
Sbjct: 17 FFAGIGGFDLAFENAGFTTNF--QCELNKFCVRILEEHWPDVPRYGDIQSLDAK--DIPD 72
Query: 78 AHAWLLSPPCQPYT-------RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
A W PCQ + R GL+ ++S F F+ ++E K P ++ +ENV
Sbjct: 73 ASVWCGGFPCQDVSVARGSKGRLGLKGKNS-GLFFPFINLIE-----AKRPQVVLLENVT 126
Query: 131 GFETSDTHAK---MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
G +S ++E L + Y+ +++ FG P SRPR F A
Sbjct: 127 GLLSSHNGQDFRVILERLTSLGYVVSWRVMNSRFFGAPQSRPRVFICA 174
>gi|423135365|ref|ZP_17123011.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CIP
101113]
gi|423328031|ref|ZP_17305839.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CCUG
3837]
gi|371642354|gb|EHO07920.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CIP
101113]
gi|404605563|gb|EKB05147.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CCUG
3837]
Length = 325
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 6/164 (3%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE-L 73
+++ +SG GGM SL + Q++ AFD + A VY NF H Y ++ E +
Sbjct: 3 IVDLFSGCGGM--SLGFQNAGFQILAAFDKWEPAVKVYRDNFDHPIYDTDLGTNEGLEFV 60
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
+ + PPCQ ++ G ++ + RA + +I P +ENV
Sbjct: 61 KSFKPQMIIGGPPCQDFSSAG-KRDETLGRADLTISFANIISEA--NPEWFVMENVERIT 117
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
S+ + ++I + Y +L GVP SR R+F + +
Sbjct: 118 KSNILKEALKIFKKAGYGISYQVLDASYCGVPQSRKRFFLIGHK 161
>gi|419318312|ref|ZP_13860113.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC12A]
gi|419341449|ref|ZP_13882910.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC12E]
gi|378168109|gb|EHX29020.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC12A]
gi|378185998|gb|EHX46622.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC12E]
Length = 432
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 20/168 (11%)
Query: 18 FYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYG 77
F++GIGG + A + ++N + E ++ P G+IQ+L A D+
Sbjct: 13 FFAGIGGFDLAFENAGFTTNF--QCELNKFCVRILEEHWPDVPRYGDIQSLDAK--DIPD 68
Query: 78 AHAWLLSPPCQPYT-------RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
A W PCQ + R GL+ ++S F F+ ++E K P ++ +ENV
Sbjct: 69 ASVWCGGFPCQDVSVARGSKGRLGLKGKNS-GLFFPFINLIE-----AKRPQVVLLENVT 122
Query: 131 GFETSDTHAK---MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
G +S ++E L + Y+ +++ FG P SRPR F A
Sbjct: 123 GLLSSHNGQDFRVILERLTSLGYVVSWRVMNSRFFGAPQSRPRVFICA 170
>gi|296282358|ref|ZP_06860356.1| DNA-cytosine methyltransferase [Citromicrobium bathyomarinum JL354]
Length = 439
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQNLTAA 71
+R ++ ++GIGG+R + V + + A + Y +NF + G+++ A
Sbjct: 90 FRFIDLFAGIGGLRIGFQ--GIGGHCVFTSEWDRFAQETYRVNFRDNHKLHGDVREF-AE 146
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSS---------DARAFSFLKILELIPHTVKPP 121
++ H LL PCQP++ G+ K+++ D + F ++I H P
Sbjct: 147 NPELIPEHDVLLGGFPCQPFSLAGVSKKNALGRPHGFMCDTQGTLFFDTAQIIAH--HQP 204
Query: 122 HMLFVENVVGFETSD---THAKMIEILANS-DYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
+ENV E D T A ++ +L N Y Q ++S + VP R R F + R
Sbjct: 205 AAFVLENVKNLEGHDKGRTFATIMHVLENELGYHVQARVISSAPW-VPQKRERIFIVGFR 263
Query: 178 KPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSW 217
+ +F N L P+ G +++ HDQ D +
Sbjct: 264 EKSAF-----NLAGLEIPAVADGPKLGSILEPHDQVDPKY 298
>gi|420473869|ref|ZP_14972547.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-19]
gi|393090997|gb|EJB91630.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-19]
Length = 351
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-STHPHFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFIFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALK 166
>gi|420470231|ref|ZP_14968941.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-11]
gi|393086356|gb|EJB87033.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-11]
Length = 348
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 17/174 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPHFELIWANDIDKDAILSYQAN--HKEAQTILCDIMQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFIFEN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG S ++ + + N+ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGL-MSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|420430157|ref|ZP_14929187.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
gi|393048776|gb|EJB49743.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
Length = 351
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 15/165 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-STHPYFELIWANDIDKDAILSYQAN--HKEAQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFIFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPR 170
VVG + ++ Y+ + IL+ L +GVP R R
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRER 158
>gi|419351123|ref|ZP_13892456.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC13B]
gi|378198710|gb|EHX59180.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC13B]
Length = 436
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 20/168 (11%)
Query: 18 FYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYG 77
F++GIGG + A + ++N + E ++ P G+IQ+L A D+
Sbjct: 17 FFAGIGGFDLAFENAGFTTNF--QCELNKFCVRILEEHWPDVPRYGDIQSLDAK--DIPD 72
Query: 78 AHAWLLSPPCQPYT-------RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130
A W PCQ + R GL+ ++S F F+ ++E K P ++ +ENV
Sbjct: 73 ASVWCGGFPCQDVSVARGSKGRLGLKGKNS-GLFFPFINLIE-----AKRPQVVLLENVT 126
Query: 131 GFETSDTHAK---MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
G +S ++E L + Y+ +++ FG P SRPR F A
Sbjct: 127 GLLSSHNGQDFRVILERLTSLGYVVSWRVMNSRFFGAPQSRPRVFICA 174
>gi|262038316|ref|ZP_06011702.1| modification methylase spri [Leptotrichia goodfellowii F0264]
gi|261747667|gb|EEY35120.1| modification methylase spri [Leptotrichia goodfellowii F0264]
Length = 318
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 9/168 (5%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75
+F SGIGG R K V +I++KA+ Y+L + G++ + EL
Sbjct: 6 FDFCSGIGGGRLGFEKNGFIC--VGHCEIDEKADKTYQLFYNDGRNYGDLMKVNPKELPD 63
Query: 76 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF--- 132
+ + + PCQ ++ G ++ +D R + ++ P +ENV G
Sbjct: 64 F--NYLIAGFPCQTFSIVGKREGFNDKRGEIIYGLKNILKEKNTP--FFIMENVKGLANH 119
Query: 133 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
E T K+IE+L DY + IL L +GV R R + + +K L
Sbjct: 120 EKGKTLKKIIELLEELDYHVEYKILDSLDYGVSQMRERLYIVGIKKEL 167
>gi|148555377|ref|YP_001262959.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1]
gi|148500567|gb|ABQ68821.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1]
Length = 412
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 95/230 (41%), Gaps = 41/230 (17%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELN-----FGHRPYQ-GNIQN 67
+ + ++GIGG+ + A V A +I+ + V N G + G +
Sbjct: 10 KAISLFTGIGGLDFGFEAAGFDTAV--ALEIDKASCRVLGDNRDWPIIGEDIHDVGTPRL 67
Query: 68 LTAAELDMYGAHAWLLSPPCQPYTRQGL-----QKQSSDARA---FSFLKILELIPHTVK 119
L AA L++ A + PPCQP+++ G K+ SD RA ++L++LE K
Sbjct: 68 LQAANLEVGEADILIGGPPCQPFSKSGYWASGDAKRLSDRRADTLGAYLRVLE----EAK 123
Query: 120 PPHMLFVENVVGFETSDTHAKMIEIL---------ANSDYLTQEFILSPLQFGVPYSRPR 170
P L +ENV G + IL A + Y +L+ FGVP R R
Sbjct: 124 PKSFL-LENVYGLAYRGKDEGLNRILSGIEEINRRAGTSYKPSWQVLNAASFGVPQLRER 182
Query: 171 YFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKL 220
F +A R+ +F+ P P G D TV+ + WD L
Sbjct: 183 VFIVASREGKNFKF----------PQPTHGPKD-TVLDGQEPFRTCWDAL 221
>gi|425432238|ref|ZP_18812810.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori GAM100Ai]
gi|410715217|gb|EKQ72642.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori GAM100Ai]
Length = 213
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPYFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFIFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|340351631|ref|ZP_08674538.1| modification methylase HgiDII [Prevotella pallens ATCC 700821]
gi|339617510|gb|EGQ22134.1| modification methylase HgiDII [Prevotella pallens ATCC 700821]
Length = 362
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 10/170 (5%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE-L 73
V++ + GIGG+ Y MK+ ++++ FD++ YE N +I+N+T + L
Sbjct: 18 VVDLFCGIGGLSYG-MKSQ-GFKILKGFDLDATCKYSYETNNEAEFQYKDIRNVTQKDIL 75
Query: 74 DMYGAHAWLL---SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV- 129
+Y ++ + PCQP++ + ++ D +S L + V P ++ +ENV
Sbjct: 76 PLYSKNSIKVLAGCAPCQPFSSYAFKNKTKDKEKYSLLDEFGRLVKEVH-PDIVTMENVP 134
Query: 130 --VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
F+ + I++L ++ ++ +G+P +R R LA R
Sbjct: 135 AITSFKLKSVLSDFIKVLQEENFFVTYQVVYCPNYGIPQTRKRLVLLASR 184
>gi|317501747|ref|ZP_07959934.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium
8_1_57FAA]
gi|336439618|ref|ZP_08619228.1| hypothetical protein HMPREF0990_01622 [Lachnospiraceae bacterium
1_1_57FAA]
gi|316896869|gb|EFV18953.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium
8_1_57FAA]
gi|336015678|gb|EGN45483.1| hypothetical protein HMPREF0990_01622 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 499
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 14/173 (8%)
Query: 14 RVLEFYSGIGGMRYS----LMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
R ++ ++G+GG+R L + + A+ V + +I A Y+ FG+ G+I T
Sbjct: 68 RFIDLFAGLGGIRLGFEEGLREVGLEAKCVFSSEIKKYAIKAYQGYFGNEKVYGDI---T 124
Query: 70 AAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTV---KPPHMLF 125
E D +LL+ PCQP++ G +D R F +I ++ + K
Sbjct: 125 QIETDTIPDFDFLLAGFPCQPFSSAGKGLGFADTRGTMFFEIERILKEKMDAGKAAKGFL 184
Query: 126 VENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
+ENV G D T A +++ L Y ++ FG+P SR R + +
Sbjct: 185 LENVEGLVNHDGGNTLAVIMDHLQKLGYNVNYKLIDSQYFGLPQSRKRVYIVG 237
>gi|428773133|ref|YP_007164921.1| DNA-cytosine methyltransferase [Cyanobacterium stanieri PCC 7202]
gi|428687412|gb|AFZ47272.1| DNA-cytosine methyltransferase [Cyanobacterium stanieri PCC 7202]
Length = 340
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 12/172 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+ ++ ++GIGG +L A V A + + + ++Y N G P +G+I + E
Sbjct: 8 KFVDLFAGIGGFHQAL--KSYQADCVFASEWDQYSQEIYLKNHGILP-EGDITKI--PEF 62
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
D+ PCQ ++ G Q +D R F + ++ + P + +ENV F
Sbjct: 63 DIPSHDLLCAGFPCQAFSISGKQLGFNDTRGTLFFDVARIVNY--HQPKFILLENVKNFA 120
Query: 134 TSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
D H + I+ N+ Y +L+ FGVP R R + +A RK L
Sbjct: 121 RHD-HGNALNIVVNTLDEIGYKVYYQVLNSSYFGVPQKRERIYIVAFRKDLE 171
>gi|169823586|ref|YP_001691089.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328]
gi|167832206|dbj|BAG09121.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328]
Length = 330
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 11/171 (6%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74
++ +SG GG+ +KA + V +D + + YE N+ R + +I N+ + EL
Sbjct: 3 LISLFSGAGGLDLGFIKAGFNVLVANEYD--KRIWETYEKNYETRLIKDDITNVRSNELP 60
Query: 75 MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET 134
+ PPCQ ++ G K D R F + + ++ K P ENV G
Sbjct: 61 --DCDGLIGGPPCQSWSEAGSLKGIEDPRGQLFYEYIRILRD--KSPKFFLAENVKGM-M 115
Query: 135 SDTHAKMIEILAN----SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
+ H K ++ + + + Y +L+ +GV R R F + RK L+
Sbjct: 116 AKRHNKAVQSIISQFNKAGYDVFIHLLNASDYGVAQDRKRIFYVGFRKDLN 166
>gi|421709865|ref|ZP_16149224.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R018c]
gi|421723116|ref|ZP_16162373.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R056a]
gi|407211310|gb|EKE81179.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R018c]
gi|407225484|gb|EKE95255.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R056a]
Length = 160
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-STHPYFELIWANDIDKDAILSYQAN--HKEAQTILCDIMQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L VKP +F EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDL----VKPKIFVF-EN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYF 172
VVG S ++ + + N+ Y+ + IL+ L +GVP R F
Sbjct: 114 VVGL-MSMQKGQLFQQICNAFKERGYILEHAILNALDYGVPQIREEVF 160
>gi|428214875|ref|YP_007088019.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
gi|428003256|gb|AFY84099.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
Length = 298
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 11/175 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
RV F++GIGG +A + QV+ +I+ + + ++ + P +I LT A +
Sbjct: 2 RVASFFAGIGGFDLGFERAGM--QVIFQCEIDKFCQAILKRHWPNVPIYEDITTLTPATI 59
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQS-SDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132
+ W PCQ + +++ R+ F K +EL+ V PP ++ +ENV G
Sbjct: 60 PQ--SDLWCAGWPCQDLSNANTERKGLGGERSGLFYKFMELV-GEVHPPWVV-LENVPGL 115
Query: 133 ---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK-RKPLSFR 183
E +I L YL + L G+P+ R R F +A R P +++
Sbjct: 116 LCAEQGTALEAVINTLETHGYLGGWLSCNALHSGLPHDRDRVFFIASFRSPRAYK 170
>gi|254488706|ref|ZP_05101911.1| C-5 cytosine-specific DNA methylase [Roseobacter sp. GAI101]
gi|214045575|gb|EEB86213.1| C-5 cytosine-specific DNA methylase [Roseobacter sp. GAI101]
Length = 384
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 22/173 (12%)
Query: 17 EFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP-YQGNIQNLTAAEL-- 73
EF+ G G +R +L V A DI+ VYE N+G +QG+I L A+L
Sbjct: 13 EFFCGGGMVRAALQD---RWDCVLANDIDPMKCAVYERNWGQEALHQGDIATLPDAKLRQ 69
Query: 74 --DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP---PHMLFVEN 128
D+Y A S PCQ ++ G + S AR+ F + I + P ++ EN
Sbjct: 70 PIDLYWA-----SSPCQDFSLAGKGQGLSGARSGVFGHWADKIETAIDAGFAPRIIAFEN 124
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFG----VPYSRPRYFCLAKR 177
VVG + + A + +LA ++ + + L+ +P SRPR F + R
Sbjct: 125 VVGLVSRNAGADLNTVLAR--FVRLGYKVGALEIDARRFLPQSRPRLFVICVR 175
>gi|37524602|ref|NP_927946.1| hypothetical protein plu0600 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784026|emb|CAE12895.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 379
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GHRPYQGNIQNLTAA 71
W LEF++GIG R L A + +DIN KA +YE + G+ ++ +L
Sbjct: 12 WTALEFFAGIGLARAGLELAGIKTLWANDYDINKKA--MYEGQWGGNELLLADVHSLCGD 69
Query: 72 ELDMYGAHAWLLSPPCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+L AW S PC + R GL+ + F F +++ + + P ++ +E
Sbjct: 70 DLPTVDV-AW-SSSPCTDLSLAGKRAGLRGGRESSAFFGFTRLIAEMKE--RKPKVIALE 125
Query: 128 NVVGFETS----DTHAKMIEILANS-DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
NV G +S D A E NS Y L +F +P SRPR F + + P+
Sbjct: 126 NVTGLASSHNREDLRAAAKEF--NSLGYAVDAITLDARRF-IPQSRPRLFLIGAQYPI 180
>gi|116748761|ref|YP_845448.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB]
gi|116697825|gb|ABK17013.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB]
Length = 429
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 104/255 (40%), Gaps = 40/255 (15%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQ--GNIQNLTAAE 72
+ ++G GG+ L A + ++ A + ++N H G+I ++ E
Sbjct: 25 TISLFTGAGGLDLGLEAAGFCISI--CVEVAKDAQETLKVNRPHWKLAEPGHIHQISPPE 82
Query: 73 L----DMYGAHAWLLS--PPCQPYT--------RQGLQKQSSDARAFSFLKILELIPHTV 118
+ ++ LLS PPCQP++ RQGL+ D RA L+++ V
Sbjct: 83 ILEQSNLRRGELALLSGGPPCQPFSKSAYWTGGRQGLR----DPRASGLRAYLDVV--EV 136
Query: 119 KPPHMLFVENVVGFETSDTHAKMIEILAN----------SDYLTQEFILSPLQFGVPYSR 168
P ++ +ENV G + +++LA+ S Y Q F L+ + +GVP SR
Sbjct: 137 ALPKVILLENVRGLAPNGNRDGGLKLLADGIRDINRRLGSAYKLQVFHLNAVNYGVPQSR 196
Query: 169 PRYFCLAKRKPLSFRCQLLNNQLLRSPSP------LLGNDDMTVITKHDQPDDSWDKLLE 222
R F LA +F+ + + P +G+ D +P W LL+
Sbjct: 197 ERVFLLASIDGTTFQIPPVTHGCGDRLEPRVTAWDAIGDLDSPEWPSELEPAGKWAGLLK 256
Query: 223 SCDPVERFLEFSNSG 237
S + +L + G
Sbjct: 257 SIPEGKNYLWHTKRG 271
>gi|17863973|gb|AAL46998.1|AF448250_2 putative C-5 cytosine-specific DNA methylase [Bacteroides coprosuis
DSM 18011]
Length = 401
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA 71
++ ++ ++GIGG+R + V + +I+ A Y N+G P G+I + A
Sbjct: 73 TFKFIDLFAGIGGIRLPFQLN--GGECVFSSEIDYHAQKTYYSNYGDYP-SGDITKIKAE 129
Query: 72 ELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV- 129
++ H LL+ PCQ +++ GL K +D R F +I ++ K P M +ENV
Sbjct: 130 DIP---DHDILLAGFPCQAFSQAGLGKGFNDTRGTMFFEIQRILAE--KQPKMFLLENVK 184
Query: 130 --VGFETSDTHAKMIEILANS-----------------------DYLTQEFILSPLQFGV 164
+ + T MI+IL+ S +Y +L+ FG
Sbjct: 185 RLISHDGKKTFKTMIDILSGSHNEEIPKDFPISDEARKALSKKLNYWIDFKVLNAKDFGS 244
Query: 165 PYSRPRYFCLA 175
P +R R + +
Sbjct: 245 PQNRERIYIVG 255
>gi|386748487|ref|YP_006221695.1| site-specific DNA methylase [Helicobacter cetorum MIT 99-5656]
gi|384554729|gb|AFI06485.1| site-specific DNA methylase [Helicobacter cetorum MIT 99-5656]
Length = 405
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 22/195 (11%)
Query: 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLT 69
G ++++ +SG GG+ +K +V+ A D +A + Y+ N G G+I +
Sbjct: 3 GNKYKIISLFSGCGGLDLGFIKE--GFEVIWANDFFKEAVETYQKNIGSHIVYGDITKIP 60
Query: 70 A----AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125
+ +E D+ L PCQ ++ ++ D R F + ++L L+ K P
Sbjct: 61 SNDIPSECDIL-----LGGFPCQGFSVANTKRSMEDKRNFLYKELLRLLRD--KQPKFFV 113
Query: 126 VENVVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKR---- 177
ENV G S ++IE++ Y +L +GVP R R + R
Sbjct: 114 AENVKGL-LSMQKGQVIEMIVKDFKSLGYYVDYKLLKASDYGVPQHRERVIIIGNRLGLK 172
Query: 178 KPLSFRCQLLNNQLL 192
P + L N LL
Sbjct: 173 NPFPKKTHGLCNDLL 187
>gi|396578258|gb|AFM52076.2| DNA methyltransferase [Mycoplasma bovis HB0801]
Length = 594
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 13 WRVLEFYSGIGGMRY---------SLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG 63
+R+L+ +SG GG Y +L+ D + + F N D+ + +
Sbjct: 5 FRILDLFSGAGGFSYGLDSLEEFETLIATDFNKSALNTFKHNIPKADIILGDITKSEVKE 64
Query: 64 NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHM 123
I N A EL + + + PPCQ ++ +G ++ D R F FL+ L+++ P +
Sbjct: 65 QIIN-KANELKI---NMIIGGPPCQGFSNKGKKQGLDDPRNFLFLEYLDIVEKV--SPEL 118
Query: 124 LFVENVVGFETS------DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA-K 176
+ENV + D + IE++ Y +L+ FGVP +R R +A K
Sbjct: 119 FIIENVKTMLIAVKGYFIDQIVEKIEMMG---YKISYGVLNAKDFGVPQNRARAIIIAHK 175
Query: 177 RKPLSF 182
K +S
Sbjct: 176 EKTISL 181
>gi|342732478|ref|YP_004771317.1| cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384455872|ref|YP_005668467.1| DNA-cytosine methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|417960381|ref|ZP_12602994.1| Cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-1]
gi|417965740|ref|ZP_12607224.1| Cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-4]
gi|417968993|ref|ZP_12609958.1| Cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-co]
gi|418016119|ref|ZP_12655684.1| DNA (cytosine-5-)-methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418372731|ref|ZP_12964823.1| Cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342329933|dbj|BAK56575.1| cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345506454|gb|EGX28748.1| DNA (cytosine-5-)-methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984215|dbj|BAK79891.1| DNA-cytosine methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|380331171|gb|EIA22260.1| Cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-1]
gi|380335896|gb|EIA25988.1| Cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-4]
gi|380338564|gb|EIA27441.1| Cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-co]
gi|380342400|gb|EIA30845.1| Cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-SU]
Length = 297
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 20/181 (11%)
Query: 16 LEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH---RPYQGN-------I 65
++ ++GIGG ++ ++ + V A + + Y NF ++ N
Sbjct: 9 IDLFAGIGGFHIAM--HNIGGKCVFASEWDSNCRKTYRKNFDRISPSIFKKNDSDLKLFA 66
Query: 66 QNLTAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
+++T ++++ H L + PCQP+++ G + D R F + ++I K P +
Sbjct: 67 EDITKVDVNLIPNHDVLCAGFPCQPFSQAGYKLGFEDIRGTLFFNVADII--RAKKPKAV 124
Query: 125 FVENVVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
F+ENV G D + + ++ N+ Y I+ FG+P RPR + + R +
Sbjct: 125 FLENVRGLLKHD-NGRTFNVIENTLRELCYTVNYKIIKASDFGLPQHRPRIYIICMRSDI 183
Query: 181 S 181
Sbjct: 184 K 184
>gi|402311123|ref|ZP_10830074.1| putative modification methylase HhaI [Eubacterium sp. AS15]
gi|400365859|gb|EJP18903.1| putative modification methylase HhaI [Eubacterium sp. AS15]
Length = 314
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 17/171 (9%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA----NDVYELNFGHRPYQGNIQNLTA 70
VLE + GIG +R +L++ + +VV+ +I+ N +Y +F +
Sbjct: 11 VLELFGGIGALRKALIRLKIPHKVVDYVEIDKNCVKSYNALYNTDFISKDIVKYHAPNER 70
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+L M+G+ PCQ ++R G +K + + R+ + + +I P ++ E
Sbjct: 71 VDLLMHGS-------PCQDFSRIGQKKGGVKGTGTRSSLLFETVRIIEEMNMRPKVVLWE 123
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLA 175
NV G D + L + L E +L+ + FG+P +R R F ++
Sbjct: 124 NVKGVLDKDMRTSFFQYLDEMERLGYENKYKVLNAMDFGIPQNRERIFVVS 174
>gi|399925125|ref|ZP_10782483.1| cytosine-specific DNA-methyltransferase [Peptoniphilus rhinitidis
1-13]
Length = 312
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA-----NDVYELNFGHRPYQGNIQNL 68
++LE + GIG +R + + + +VV+ +I DKA N +Y ++ + G
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEI-DKACVKSYNALYGEDYKPKSVVGYKAPN 63
Query: 69 TAAELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLF 125
+L M+G+ PCQ ++R G ++ ++S R+ + + +I P +
Sbjct: 64 EKIDLIMHGS-------PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKDKPKWII 116
Query: 126 VENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 182
ENV G D+ ++ L + Y ++ IL+ + FG+P R R F ++ +F
Sbjct: 117 WENVKGVLDRNMRDSFFIYLKELESLGYESKYEILNAMDFGIPQKRERIFVVSCLGANNF 176
Query: 183 RCQLLNNQLLRSPSPLLGND 202
L + R S L D
Sbjct: 177 SFNKLERKETRPLSEFLEKD 196
>gi|433615137|ref|YP_007191934.1| Site-specific DNA methylase [Sinorhizobium meliloti GR4]
gi|429553336|gb|AGA08335.1| Site-specific DNA methylase [Sinorhizobium meliloti GR4]
Length = 504
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 29/197 (14%)
Query: 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNI-QNL 68
G RVL+ +SG GG+ A ++V A + + A + LNF H + +I +++
Sbjct: 18 GARPRVLDLFSGCGGISLGFQSAGF--EIVAAVENDPDAARSHGLNFHHGEDRHSIPRDI 75
Query: 69 TA---AELDMY-------GAHAWLLS-PPCQPYTRQGLQKQSS----------DARAFSF 107
TA A+L GA ++ PPCQ + R G K D RA +
Sbjct: 76 TATSPADLATALGLGPAAGAFDVIVGGPPCQAFARVGRSKLREIAEHPEAFRHDPRARLY 135
Query: 108 LKILELIPHTVKPPHMLFVENVVGFETSDTH---AKMIEILANSDYLTQEFILSPLQFGV 164
++ L + P + +ENV H A++ EILA+ DY+ + +L+ +GV
Sbjct: 136 IEYLAYVEACA--PLAVVIENVPDMLNHGGHNLAAEIGEILASKDYVVRYTLLNAAFYGV 193
Query: 165 PYSRPRYFCLAKRKPLS 181
P R R +A RK L+
Sbjct: 194 PQMRERMILIAIRKELA 210
>gi|419882036|ref|ZP_14403310.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9545]
gi|388363105|gb|EIL27049.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9545]
Length = 372
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 11/173 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSA--QVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+RV++ + G GG+ Y + ++S + + A D N A + Y NFG Q NI+ +
Sbjct: 7 FRVIDLFCGAGGLSYGFLHGEMSDYFESILAIDNNAAAINTYNANFGLHGVQANIEEWAS 66
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAF--SFLKILELIPHTVKPPHMLFVEN 128
+ + A + PPCQ ++ + RA ++ ++E M +EN
Sbjct: 67 SNT-VPEADVVIGGPPCQGFSLLNKNRYGDHRRALWEPYMDVIERSRAC-----MFVMEN 120
Query: 129 VVGFETSDTHAKMIEILANSDY-LTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
V G SD A + + + L +L+ +GVP +R R + ++ L
Sbjct: 121 VPGLLISDEFADITFRAKSMGFILLNPMVLNTADYGVPQTRKRTIAIGIKREL 173
>gi|339321213|ref|YP_004683735.1| adenine-specific DNA-methyltransferase [Mycoplasma bovis Hubei-1]
gi|392430292|ref|YP_006471337.1| DNA methyltransferase [Mycoplasma bovis HB0801]
gi|338227338|gb|AEI90400.1| adenine-specific DNA-methyltransferase [Mycoplasma bovis Hubei-1]
Length = 593
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 13 WRVLEFYSGIGGMRY---------SLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG 63
+R+L+ +SG GG Y +L+ D + + F N D+ + +
Sbjct: 4 FRILDLFSGAGGFSYGLDSLEEFETLIATDFNKSALNTFKHNIPKADIILGDITKSEVKE 63
Query: 64 NIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHM 123
I N A EL + + + PPCQ ++ +G ++ D R F FL+ L+++ P +
Sbjct: 64 QIIN-KANELKI---NMIIGGPPCQGFSNKGKKQGLDDPRNFLFLEYLDIVEKV--SPEL 117
Query: 124 LFVENVVGFETS------DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA-K 176
+ENV + D + IE++ Y +L+ FGVP +R R +A K
Sbjct: 118 FIIENVKTMLIAVKGYFIDQIVEKIEMMG---YKISYGVLNAKDFGVPQNRARAIIIAHK 174
Query: 177 RKPLSF 182
K +S
Sbjct: 175 EKTISL 180
>gi|404481724|ref|ZP_11016954.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
OBRC5-5]
gi|404345028|gb|EJZ71382.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
OBRC5-5]
Length = 346
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 15/177 (8%)
Query: 13 WRVLEFYSGIGGMRYSL---MKADVSAQVVEAFDINDKANDVYELNFGHR-PYQGNIQNL 68
++ ++ ++GIGG+R K D+ V +D KA + Y+ N+ G+I +
Sbjct: 2 YKSIDLFAGIGGIRLGFEQAFKGDIKTVFVSEWD--KKAVETYKANYNDGIDVVGDITKV 59
Query: 69 TAAELDMYGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE 127
++ H LL+ PCQ ++ G ++ DAR F + ++ + P ++F E
Sbjct: 60 DEKDIP---PHDILLAGFPCQAFSLAGQKRGFEDARGTLFFDVARIVKY--HKPKVVFCE 114
Query: 128 NV---VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
NV V + T + +L + Y +L+ FGVP +R R + + R ++
Sbjct: 115 NVKNLVNHDRGRTFDVIKSVLEDLGYKVFYKVLNSKNFGVPQNRERIYIVGFRNDIA 171
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 329 SSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388
S+ ++++R TPRE A L FP +F+F ++ Y GNS+++ V+ + + + AQ
Sbjct: 266 GSVNKEYIRKMTPREWARLQGFPDNFKFV--VADTHLYKQFGNSVTVPVIRAIAEKIKAQ 323
>gi|419208896|ref|ZP_13752002.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC8C]
gi|419874476|ref|ZP_14396402.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9534]
gi|420101124|ref|ZP_14612254.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9455]
gi|420107297|ref|ZP_14617649.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9553]
gi|425253383|ref|ZP_18646236.1| cytosine-specific methyltransferase [Escherichia coli CB7326]
gi|378057669|gb|EHW19893.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC8C]
gi|388350875|gb|EIL16187.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9534]
gi|394413243|gb|EJE87296.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9553]
gi|394418148|gb|EJE91849.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9455]
gi|408185748|gb|EKI11880.1| cytosine-specific methyltransferase [Escherichia coli CB7326]
Length = 372
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 11/173 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSA--QVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+RV++ + G GG+ Y + ++S + + A D N A + Y NFG Q NI+ +
Sbjct: 7 FRVIDLFCGAGGLSYGFLHGEMSDYFESILAIDNNAAAINTYNANFGLHGVQANIEEWAS 66
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAF--SFLKILELIPHTVKPPHMLFVEN 128
+ + A + PPCQ ++ + RA ++ ++E M +EN
Sbjct: 67 SNT-VPEADVVIGGPPCQGFSLLNKNRYGDHRRALWEPYMDVIERSRAC-----MFVMEN 120
Query: 129 VVGFETSDTHAKMIEILANSDY-LTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
V G SD A + + + L +L+ +GVP +R R + ++ L
Sbjct: 121 VPGLLISDEFADITFRAKSMGFILLNPMVLNTADYGVPQTRKRTIAIGIKREL 173
>gi|208434405|ref|YP_002266071.1| type II DNA modification enzyme [Helicobacter pylori G27]
gi|208432334|gb|ACI27205.1| type II DNA modification enzyme [Helicobacter pylori G27]
Length = 348
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 17/174 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SIHPYFELIWANDIDRDAILSYQAN--HKEAQTILCDIAQLN 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFEN 113
Query: 129 VVGFETSDTHAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG S ++ + + N+ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGL-MSMQKGQLFQQICNAFKERGYVLEHAILNALDYGVPQIRERVILVGTLK 166
>gi|153933427|ref|YP_001385281.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. ATCC 19397]
gi|153933974|ref|YP_001384769.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. ATCC 19397]
gi|153935154|ref|YP_001386762.1| DNA-cytosine methyltransferase [Clostridium botulinum A str. Hall]
gi|153935271|ref|YP_001386815.1| DNA-cytosine methyltransferase [Clostridium botulinum A str. Hall]
gi|153937696|ref|YP_001388073.1| DNA-cytosine methyltransferase [Clostridium botulinum A str. Hall]
gi|152929471|gb|ABS34971.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. ATCC 19397]
gi|152930018|gb|ABS35518.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. ATCC 19397]
gi|152931068|gb|ABS36567.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. Hall]
gi|152931185|gb|ABS36684.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. Hall]
gi|152933610|gb|ABS39109.1| DNA-cytosine methyltransferase family protein [Clostridium
botulinum A str. Hall]
Length = 315
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
++LE + GIG R +L+ V + ++ +I++KA Y F H+ Q++ L
Sbjct: 3 QILELFGGIGAPRKALINLGVPVKAIDYVEIDEKAVRSYNAIF-HKDLAYKTQSVVGYNL 61
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPH--TVKPPHMLF--V 126
+ PCQ ++ G QK + ++ R+ + + +I KP ++++ V
Sbjct: 62 K---PDILIHGSPCQDFSIAGHQKGADKGTETRSSLMWETINIIEQMGVWKPKYVIWENV 118
Query: 127 ENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
+NV+ K ++ + N Y + +L+ L FG+P R R F ++
Sbjct: 119 KNVLSKHMRHNFNKYLDEMQNMGYTSNFEVLNALDFGLPQKRERVFTIS 167
>gi|440680639|ref|YP_007155434.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
gi|428677758|gb|AFZ56524.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
Length = 329
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA- 70
+ +V++ +SG GG+ SL + ++ AF+ A +VY+ NF H + ++ +
Sbjct: 9 SLKVIDLFSGCGGL--SLGFQNYGFEISAAFENWKPAINVYQQNFNHPIIEYDLSQVNND 66
Query: 71 -AELDMYGAHAWLLSPPCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVEN 128
+ + + PPCQ ++ G K++ D R + E++ + +EN
Sbjct: 67 YSIFKKFLPDVIIGGPPCQDFSSAG--KRNEDLGRGDLSITFAEIVANVAS--QWFVIEN 122
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
V F S+ + + +IL ++ Y E +L GVP R R+FC+ +
Sbjct: 123 VDLFRKSNKYQEFRQILKSAGYGLTEKVLDASLCGVPQKRKRFFCIGE 170
>gi|420471951|ref|ZP_14970647.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-18]
gi|393091306|gb|EJB91938.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-18]
Length = 348
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y ++V A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-STHPYFELVWANDIDKDAILSYQAN--HKEAQTILCDIVQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVSIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|193071751|ref|ZP_03052649.1| DNA-cytosine methyltransferase [Escherichia coli E110019]
gi|192954951|gb|EDV85456.1| DNA-cytosine methyltransferase [Escherichia coli E110019]
Length = 374
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 11/173 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSA--QVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+RV++ + G GG+ Y + ++S + + A D N A + Y NFG Q NI+ +
Sbjct: 9 FRVIDLFCGAGGLSYGFLHGEMSDYFESILAIDNNAAAINTYNANFGLHGVQANIEEWAS 68
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAF--SFLKILELIPHTVKPPHMLFVEN 128
+ + A + PPCQ ++ + RA ++ ++E M +EN
Sbjct: 69 SNT-VPEADVVIGGPPCQGFSLLNKNRYGDHRRALWEPYMDVIERSRAC-----MFVMEN 122
Query: 129 VVGFETSDTHAKMIEILANSDY-LTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
V G SD A + + + L +L+ +GVP +R R + ++ L
Sbjct: 123 VPGLLISDEFADITFRAKSMGFILLNPMVLNTADYGVPQTRKRTIAIGIKREL 175
>gi|424756231|ref|ZP_18184063.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424774160|ref|ZP_18201186.1| DNA-cytosine methyltransferase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421934668|gb|EKT92421.1| DNA-cytosine methyltransferase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421949804|gb|EKU06718.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CFSAN001630]
Length = 374
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 11/173 (6%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSA--QVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+RV++ + G GG+ Y + ++S + + A D N A + Y NFG Q NI+ +
Sbjct: 9 FRVIDLFCGAGGLSYGFLHGEMSDYFESILAIDNNAAAINTYNANFGLHGVQANIEEWAS 68
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAF--SFLKILELIPHTVKPPHMLFVEN 128
+ + A + PPCQ ++ + RA ++ ++E M +EN
Sbjct: 69 SNT-VPEADVVIGGPPCQGFSLLNKNRYGDHRRALWEPYMDVIERSRAC-----MFVMEN 122
Query: 129 VVGFETSDTHAKMIEILANSDY-LTQEFILSPLQFGVPYSRPRYFCLAKRKPL 180
V G SD A + + + L +L+ +GVP +R R + ++ L
Sbjct: 123 VPGLLISDEFADITFRAKSMGFILLNPMVLNTADYGVPQTRKRTIAIGIKREL 175
>gi|315654722|ref|ZP_07907628.1| modification methylase NgoPII [Mobiluncus curtisii ATCC 51333]
gi|315491186|gb|EFU80805.1| modification methylase NgoPII [Mobiluncus curtisii ATCC 51333]
Length = 360
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 142/374 (37%), Gaps = 71/374 (18%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY----QGNIQNLTA 70
V+ +SG GG+ +A + V FD +YE + P+ +G+I+ +T
Sbjct: 8 VISLFSGCGGLDLGFEQAGFNIPVANEFDPT-----IYETFKANHPHTHLIEGDIRGVTI 62
Query: 71 AELDMY--GAHAWLLS-PPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHML 124
++ + G A ++ PPCQ ++ G + DAR + +++IL P
Sbjct: 63 EDIAPFIDGEVAGIIGGPPCQSWSEAGALRGIEDARGQLFYDYIRILREF-----RPKFF 117
Query: 125 FVENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181
ENV G S+ +I++ + Y +++ +GV R R F + RK L+
Sbjct: 118 LAENVSGMLANRHSEAVQNIIKLFEEAGYDVTLTMVNAKNYGVAEERKRVFYIGFRKDLN 177
Query: 182 FRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVN 241
DD IT D WD L E+ P + ++ + +N
Sbjct: 178 IDFVFPKGST---------EDDAKKITLRDV---IWD-LQETAVPAAE--KNRHNPEAIN 222
Query: 242 TETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCC 301
F + + +R + D + R ++P + +
Sbjct: 223 NNEYFTGAFSPIF---------MSRNRVKNWDEQAFTVQASGRQCQ----LHPQAPKMVK 269
Query: 302 FTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLS 361
F ++ R+V+G+ +L R T REVA + FP DF+F +
Sbjct: 270 FGQNDCRFVEGSENL-------------------YRRMTIREVARIQGFPDDFKFIYK-E 309
Query: 362 LRQRYALLGNSLSI 375
Y ++GN++ +
Sbjct: 310 TNNAYKMIGNAVPV 323
>gi|225849813|ref|YP_002730047.1| modification methylase FnuDI [Persephonella marina EX-H1]
gi|225646519|gb|ACO04705.1| putative modification methylase FnuDI [Persephonella marina EX-H1]
Length = 307
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 71/173 (41%), Gaps = 7/173 (4%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+VL+ + G+GG Y L KA + DIN ++E N + +++N +
Sbjct: 2 KVLDLFCGMGGFSYGLSKAGYE---ITGVDINKWVEKIFEKNCIGKAIIKDLKNDFIFDE 58
Query: 74 DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE 133
+ + PC+P++ L+K+ S F ++ L +KP +F ENVV
Sbjct: 59 N---PDIIVGGSPCKPWSTLNLKKRGSSHEDFVLMEKYFLHVLEIKPAVFVF-ENVVPVG 114
Query: 134 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 186
T K I L Y E + FG +R RYF K S R Q
Sbjct: 115 KDKTLRKFIRKLRAHGYSIYETKIKYSDFGAAIARERYFAFGFYKDKSARKQF 167
>gi|283834737|ref|ZP_06354478.1| modification methylase HgiDII [Citrobacter youngae ATCC 29220]
gi|291068977|gb|EFE07086.1| modification methylase HgiDII [Citrobacter youngae ATCC 29220]
Length = 351
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 14 RVLEFYSGIGGMR--YSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY-QGNIQNLTA 70
+V++F+ G GG + L D++ + D + A D Y+ NF + + +I+N+
Sbjct: 2 KVIDFFCGCGGASKGFELAGFDIALGI----DFDKSAADSYKANFPNTAFINSDIRNVRV 57
Query: 71 AELDMY------GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHML 124
++ + PCQP++ Q ++ S+D R S L + +P + +
Sbjct: 58 RDIAEIVPDWKENDLIFCACAPCQPFSSQNKKRDSADTRR-SLLSETKRFIRAFRPKY-I 115
Query: 125 FVENVVGFET-----SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 176
F+ENV G ++ + A + L DY + ++S +GVP R R LAK
Sbjct: 116 FIENVPGIQSVKLTENGPFADFLSFLTRFDYQYEYHVISSEFYGVPQQRKRLVVLAK 172
>gi|423068110|ref|ZP_17056898.1| hypothetical protein HMPREF9682_00119 [Streptococcus intermedius
F0395]
gi|355367001|gb|EHG14714.1| hypothetical protein HMPREF9682_00119 [Streptococcus intermedius
F0395]
Length = 318
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 17/171 (9%)
Query: 15 VLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKA----NDVYELNFGHRPYQGNIQNLTA 70
VLE + GIG ++ +L++ + + V+ +++ N +Y+ F +
Sbjct: 8 VLELFGGIGAIKKALIRQKIPHKTVDYVELDKNCVKSYNALYDEEFEPKSIVDFHPTDEK 67
Query: 71 AELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLFVE 127
+L M+G+ PCQ ++R GL+K + S R+ + + +I P ++ E
Sbjct: 68 IDLLMHGS-------PCQDFSRSGLKKGGTKGSGTRSSLLFETIRIIEEMNIKPKVVLWE 120
Query: 128 NVVGFETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLA 175
NV G + A L + L E IL+ + FG+P R R F ++
Sbjct: 121 NVKGVLDRNLRASFFHYLKEMERLGYESKYEILNAMDFGIPQKRERIFVVS 171
>gi|419632144|ref|ZP_14164704.1| DNA-cytosine methyltransferase [Campylobacter jejuni subsp. jejuni
LMG 23264]
gi|419684114|ref|ZP_14212724.1| DNA-cytosine methyltransferase [Campylobacter jejuni subsp. jejuni
1577]
gi|380609405|gb|EIB29075.1| DNA-cytosine methyltransferase [Campylobacter jejuni subsp. jejuni
LMG 23264]
gi|380667472|gb|EIB82911.1| DNA-cytosine methyltransferase [Campylobacter jejuni subsp. jejuni
1577]
Length = 349
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 9/169 (5%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+V++ + G+GG+ L +A +++ +D++ YE N + + NI+N+++ E+
Sbjct: 5 KVIDLFCGVGGLSCGLKQAGF--EIIAGYDLDKTCKYAYEKNIKAQFIEKNIKNISSNEI 62
Query: 74 DMY-GAHAWLL---SPPCQPYTRQGLQKQSSDARAFSFL-KILELIPHTVKPPHMLFVEN 128
Y G + + PCQ +++ K + + ++ L + L LI P ++ +EN
Sbjct: 63 QEYFGDTKYKILVGCAPCQTFSKYTKGKNNENDEKWTLLNEFLRLIIEI--KPEIISMEN 120
Query: 129 VVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
V E I L Y I+ ++G+P +R R L +
Sbjct: 121 VPDLEKYPIFKNFISTLKKHGYFIDYKIIFCPEYGMPQNRKRLVLLGSK 169
>gi|313888225|ref|ZP_07821897.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845756|gb|EFR33145.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 321
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 17/199 (8%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA--- 70
++LE + GIG +R + + + +VV+ +I+ Y +G ++ A
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEIDKACVKSYNALYGEEYKPKSVVGYKAPNE 64
Query: 71 -AELDMYGAHAWLLSPPCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLFV 126
+L M+G+ PCQ ++R G ++ ++S R+ + + +I P +
Sbjct: 65 KIDLVMHGS-------PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKDKPKWIIW 117
Query: 127 ENVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 183
ENV G D+ ++ L + Y ++ IL+ + FG+P R R F ++ +F
Sbjct: 118 ENVKGVLDRNMRDSFFIYLKELESLGYESKYEILNAMDFGIPQKRERIFVVSCLGANNFS 177
Query: 184 CQLLNNQLLRSPSPLLGND 202
L + R S L D
Sbjct: 178 FNKLERKETRPLSEFLEKD 196
>gi|420480501|ref|ZP_14979145.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|420510945|ref|ZP_15009434.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
gi|393098414|gb|EJB99006.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|393121453|gb|EJC21936.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
Length = 351
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPHFELIWANDIDKDAILSYQAN--HKEAQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCIPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFIFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178
VVG + ++ Y+ + IL+ L +GVP R R + K
Sbjct: 114 VVGLMSMQKGQLFKQICNAFKERGYILEHAILNALDYGVPQMRERVILVGALK 166
>gi|420475342|ref|ZP_14974013.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-21]
gi|393093449|gb|EJB94066.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-21]
Length = 352
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 15/165 (9%)
Query: 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQG---NIQNLT 69
++V + + G GG+ Y +++ A DI+ A Y+ N H+ Q +I L
Sbjct: 2 YKVADIFCGAGGLSYGF-SVHPHFELIWANDIDKDAILSYQAN--HKETQTILCDIAQLH 58
Query: 70 AAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVEN 128
L L PPCQ Y+ G +K A F +L++L+L+ P + EN
Sbjct: 59 CHNLPCVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFIFEN 113
Query: 129 VVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPR 170
VVG + ++ Y+ + IL+ L +GVP R R
Sbjct: 114 VVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRER 158
>gi|227357019|ref|ZP_03841390.1| DNA-cytosine methyltransferase [Proteus mirabilis ATCC 29906]
gi|261345118|ref|ZP_05972762.1| DNA (cytosine-5-)-methyltransferase [Providencia rustigianii DSM
4541]
gi|227162822|gb|EEI47782.1| DNA-cytosine methyltransferase [Proteus mirabilis ATCC 29906]
gi|282566805|gb|EFB72340.1| DNA (cytosine-5-)-methyltransferase [Providencia rustigianii DSM
4541]
Length = 301
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 11/170 (6%)
Query: 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA 70
+ ++V F++GIGG L ++ ++ VV +IN V N+ P +I NL A
Sbjct: 7 KEYKVSSFFAGIGGFDLGLERSGMN--VVFQCEINKFCQSVLNKNWPDIPLYTDITNLKA 64
Query: 71 AELDMYGAHAWLLSPPCQPYT--RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128
D+ ++ W PCQ + QG +K AR+ F +LI + P L +EN
Sbjct: 65 N--DIPDSNVWCGGFPCQDVSSANQGKRKGLEGARSGLFYTYAKLIEE--RKPEWLIIEN 120
Query: 129 VVGFETSDTHAK---MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 175
V G S +I+ L Y +L FG P R R + +
Sbjct: 121 VPGLLNSHNGQDFRIVIDTLVELGYGISWRVLDAKYFGTPQRRRRVYIIG 170
>gi|372268774|ref|ZP_09504822.1| C-5 cytosine-specific DNA methylase [Alteromonas sp. S89]
Length = 412
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 29/211 (13%)
Query: 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAEL 73
+++ ++G GG+ L A V A +++ A N ++ +I N+T+ +L
Sbjct: 3 KIVSLFTGAGGLDLGLEAAGFETAV--AVEMDKWACQTLRANRDWPVFEDDIHNVTSEDL 60
Query: 74 DMYGA------HAWLLSPPCQPYTR-----QGLQKQSSDARAFSFLKILELIPHTVKPPH 122
G + PPCQP+++ +G K+ D RA + L ++ +KP
Sbjct: 61 KSAGGFNRRAPDLLIGGPPCQPFSKSAYWSKGDTKRLDDPRADTLTAYLRVL-RDLKPKA 119
Query: 123 MLFVENVVG--FETSDTHAKMIEIL-------ANSDYLTQEFILSPLQFGVPYSRPRYFC 173
L +ENV G F+ D K++E + S+Y +L+ +GVP R R F
Sbjct: 120 FL-LENVQGMTFKGKDEGLKLLENIIQKINEETGSNYSFTWQVLNAADYGVPQMRERVFL 178
Query: 174 LAKRKPLSFRCQLLNNQLLRSPSPLLGNDDM 204
+ R FR +Q P L DD+
Sbjct: 179 VGSRDGKVFRFPAATHQ-----DPELAVDDL 204
>gi|330718183|ref|ZP_08312783.1| cytosine-specific methyltransferase [Leuconostoc fallax KCTC 3537]
Length = 414
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 17/186 (9%)
Query: 6 CKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY---Q 62
KND ++ F++G+GG+ A + V A + + A +E NF R +
Sbjct: 1 MKND-----IVSFFAGVGGIDLGFEDAG-EYRTVYANEFDKNAQHTFETNFKSRGTYLDR 54
Query: 63 GNIQNLTAAELDMYGAHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP 120
+I+ + A E+ +A +L PCQP++ G + D R F + +I
Sbjct: 55 RDIKQVDAKEVKAKAPNASVLLAGFPCQPFSIAGYRHGFEDNRGDLFFETHRIIRFL--Q 112
Query: 121 PHMLFVENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLAK 176
P ++F+ENV T D T + E L +S Y + +L+ ++G +P +R R + +
Sbjct: 113 PKVIFLENVKNLVTHDHGNTFKVIREFLVHSGYYIKWKVLNAKEYGNIPQNRERIYVVGF 172
Query: 177 RKPLSF 182
+ +F
Sbjct: 173 KDKKAF 178
>gi|212694208|ref|ZP_03302336.1| hypothetical protein BACDOR_03734 [Bacteroides dorei DSM 17855]
gi|212663274|gb|EEB23848.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei DSM 17855]
Length = 370
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 15/178 (8%)
Query: 7 KNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQ 66
+N+ R + +SG GG+ +KA A VV A D+ +A Y+ N G QG+I
Sbjct: 6 QNNFNNIRTISLFSGAGGLDIGAIKA--GAHVVFANDMMKEACLTYKENIGDHIIQGDIN 63
Query: 67 NLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHM 123
L + + PPCQ ++ G + D R+ +S+ K++E P
Sbjct: 64 TLFDEIGKVDNPDLVIGGPPCQGFSVAG-KMDVDDKRSQLIWSYAKVIEFT-----RPRA 117
Query: 124 LFVENVVGFETSDTHAK----MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 177
+ENV T K ++E L + Y +L+ + VP +R R F + R
Sbjct: 118 FIMENVKALGTLKKWEKIREALLEKLRSLGYSVNFMVLNATDYNVPQARERIFVVGIR 175
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,255,162,486
Number of Sequences: 23463169
Number of extensions: 259543110
Number of successful extensions: 514902
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 2167
Number of HSP's that attempted gapping in prelim test: 511960
Number of HSP's gapped (non-prelim): 3756
length of query: 390
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 246
effective length of database: 8,980,499,031
effective search space: 2209202761626
effective search space used: 2209202761626
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)