Query 016377
Match_columns 390
No_of_seqs 147 out of 1713
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 12:34:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016377.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016377hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qv2_A 5-cytosine DNA methyltr 100.0 5.6E-73 1.9E-77 544.0 31.7 314 7-389 5-325 (327)
2 4h0n_A DNMT2; SAH binding, tra 100.0 4.8E-72 1.7E-76 539.2 26.1 315 11-387 2-333 (333)
3 3ubt_Y Modification methylase 100.0 4E-71 1.4E-75 535.3 21.2 320 13-388 1-323 (331)
4 3g7u_A Cytosine-specific methy 100.0 1.3E-69 4.4E-74 530.8 23.8 340 11-388 1-366 (376)
5 1g55_A DNA cytosine methyltran 100.0 2.5E-69 8.4E-74 524.1 23.5 326 12-387 2-343 (343)
6 2c7p_A Modification methylase 100.0 3.3E-68 1.1E-72 511.9 26.4 314 4-388 3-321 (327)
7 4ft4_B DNA (cytosine-5)-methyl 100.0 7.8E-66 2.7E-70 550.7 27.0 365 8-388 208-740 (784)
8 3swr_A DNA (cytosine-5)-methyl 100.0 4.3E-64 1.5E-68 536.8 21.4 363 4-388 532-997 (1002)
9 4dkj_A Cytosine-specific methy 100.0 4.5E-63 1.5E-67 486.3 16.2 318 7-389 5-392 (403)
10 3av4_A DNA (cytosine-5)-methyl 100.0 4.1E-62 1.4E-66 532.2 18.9 365 9-388 848-1307(1330)
11 2qrv_A DNA (cytosine-5)-methyl 100.0 9.4E-60 3.2E-64 445.7 20.4 274 4-388 8-291 (295)
12 3me5_A Cytosine-specific methy 100.0 6.2E-60 2.1E-64 472.9 19.6 316 10-387 86-454 (482)
13 2qrv_B DNA (cytosine-5)-methyl 100.0 7.9E-32 2.7E-36 241.3 8.7 144 1-180 22-174 (230)
14 2pv0_B DNA (cytosine-5)-methyl 100.0 1.4E-31 4.9E-36 255.6 10.2 143 2-180 179-330 (386)
15 2igt_A SAM dependent methyltra 99.0 9.4E-10 3.2E-14 105.5 10.8 159 11-177 153-324 (332)
16 2frn_A Hypothetical protein PH 98.5 3.5E-07 1.2E-11 85.3 9.9 120 12-154 126-253 (278)
17 3c0k_A UPF0064 protein YCCW; P 98.5 1E-06 3.4E-11 86.4 12.4 144 11-162 220-376 (396)
18 3cgg_A SAM-dependent methyltra 98.2 2.7E-05 9.4E-10 67.1 14.9 147 11-177 46-194 (195)
19 3k6r_A Putative transferase PH 98.2 3.8E-06 1.3E-10 78.1 9.4 121 11-154 125-253 (278)
20 1wy7_A Hypothetical protein PH 98.2 2.6E-05 8.9E-10 68.6 13.9 117 11-153 49-170 (207)
21 3lpm_A Putative methyltransfer 98.1 3.4E-05 1.2E-09 70.7 12.2 155 11-179 49-220 (259)
22 2b78_A Hypothetical protein SM 98.0 1.2E-05 4.1E-10 78.4 9.2 79 11-91 212-299 (385)
23 4dmg_A Putative uncharacterize 98.0 1.4E-05 4.8E-10 78.1 8.1 127 12-151 215-350 (393)
24 3evz_A Methyltransferase; NYSG 97.9 0.00027 9.1E-09 63.1 15.2 152 11-178 55-220 (230)
25 3q87_B N6 adenine specific DNA 97.8 0.00067 2.3E-08 57.8 15.9 141 12-179 24-164 (170)
26 3a27_A TYW2, uncharacterized p 97.8 0.00013 4.3E-09 67.6 11.6 123 11-155 119-248 (272)
27 2yxd_A Probable cobalt-precorr 97.8 0.00032 1.1E-08 59.6 12.7 120 11-161 35-160 (183)
28 2yx1_A Hypothetical protein MJ 97.7 9.1E-05 3.1E-09 70.8 9.6 109 11-152 195-311 (336)
29 2as0_A Hypothetical protein PH 97.7 3.3E-05 1.1E-09 75.5 6.5 79 11-91 217-303 (396)
30 3p9n_A Possible methyltransfer 97.7 5.1E-05 1.7E-09 65.8 6.4 74 11-87 44-123 (189)
31 3gdh_A Trimethylguanosine synt 97.7 4.1E-05 1.4E-09 69.1 5.9 77 11-94 78-161 (241)
32 2fpo_A Methylase YHHF; structu 97.7 3.3E-05 1.1E-09 68.1 4.8 71 12-86 55-131 (202)
33 3e8s_A Putative SAM dependent 97.7 0.00064 2.2E-08 59.9 13.3 145 12-177 53-226 (227)
34 3bt7_A TRNA (uracil-5-)-methyl 97.7 0.00014 4.8E-09 70.4 9.6 115 13-155 215-348 (369)
35 2ift_A Putative methylase HI07 97.7 4.7E-05 1.6E-09 67.0 5.7 73 12-87 54-135 (201)
36 3h2b_A SAM-dependent methyltra 97.6 0.0015 5.3E-08 56.7 15.3 144 12-179 42-196 (203)
37 3lcc_A Putative methyl chlorid 97.6 0.00044 1.5E-08 61.9 12.0 149 12-178 67-227 (235)
38 1ne2_A Hypothetical protein TA 97.6 0.0001 3.6E-09 64.4 7.2 113 11-152 51-164 (200)
39 3hnr_A Probable methyltransfer 97.6 0.0024 8.1E-08 56.2 16.1 129 11-158 45-201 (220)
40 3e23_A Uncharacterized protein 97.6 0.00064 2.2E-08 59.6 11.8 128 11-156 43-180 (211)
41 2ozv_A Hypothetical protein AT 97.6 0.0008 2.7E-08 61.6 12.8 79 11-90 36-128 (260)
42 3v97_A Ribosomal RNA large sub 97.6 0.00011 3.6E-09 77.2 7.6 76 12-91 540-623 (703)
43 3ajd_A Putative methyltransfer 97.5 0.00012 4.2E-09 67.7 6.9 83 11-95 83-174 (274)
44 1wxx_A TT1595, hypothetical pr 97.5 0.0001 3.4E-09 71.7 6.5 133 12-152 210-350 (382)
45 1uwv_A 23S rRNA (uracil-5-)-me 97.5 0.00068 2.3E-08 66.9 12.5 121 11-158 286-415 (433)
46 3dtn_A Putative methyltransfer 97.4 0.00049 1.7E-08 61.4 9.5 137 9-163 42-219 (234)
47 3tm4_A TRNA (guanine N2-)-meth 97.4 0.00065 2.2E-08 65.7 10.9 126 11-155 217-349 (373)
48 1yzh_A TRNA (guanine-N(7)-)-me 97.4 0.0014 4.7E-08 57.9 11.5 129 12-157 42-181 (214)
49 3tma_A Methyltransferase; thum 97.4 0.00042 1.4E-08 66.4 8.5 105 11-126 203-316 (354)
50 3e05_A Precorrin-6Y C5,15-meth 97.4 0.0032 1.1E-07 54.9 13.6 122 11-157 40-167 (204)
51 3g5l_A Putative S-adenosylmeth 97.4 0.0012 4.2E-08 59.6 11.1 91 11-116 44-137 (253)
52 3sm3_A SAM-dependent methyltra 97.4 0.002 7E-08 57.0 12.3 152 11-178 30-227 (235)
53 2esr_A Methyltransferase; stru 97.3 0.0002 6.9E-09 61.1 5.3 73 11-87 31-110 (177)
54 2b9e_A NOL1/NOP2/SUN domain fa 97.3 0.00025 8.5E-09 66.9 6.3 84 10-95 101-192 (309)
55 3eey_A Putative rRNA methylase 97.3 0.002 7E-08 55.7 11.7 73 11-87 22-103 (197)
56 3grz_A L11 mtase, ribosomal pr 97.3 0.00033 1.1E-08 61.3 6.5 117 11-157 60-184 (205)
57 1ixk_A Methyltransferase; open 97.3 0.00058 2E-08 64.5 8.5 82 11-95 118-205 (315)
58 2qm3_A Predicted methyltransfe 97.3 0.0031 1.1E-07 60.8 13.8 126 11-156 172-307 (373)
59 2ex4_A Adrenal gland protein A 97.3 0.002 6.9E-08 57.7 11.5 129 11-156 79-223 (241)
60 3fut_A Dimethyladenosine trans 97.3 0.00032 1.1E-08 64.8 6.2 68 14-86 49-119 (271)
61 2f8l_A Hypothetical protein LM 97.2 0.0015 5.1E-08 62.4 10.8 145 10-163 129-291 (344)
62 1inl_A Spermidine synthase; be 97.2 0.0043 1.5E-07 57.9 13.7 150 12-178 91-252 (296)
63 3njr_A Precorrin-6Y methylase; 97.2 0.0057 2E-07 53.6 13.5 116 11-155 55-177 (204)
64 1xtp_A LMAJ004091AAA; SGPP, st 97.2 0.0024 8.3E-08 57.4 11.4 147 11-176 93-253 (254)
65 4dzr_A Protein-(glutamine-N5) 97.2 0.00084 2.9E-08 58.6 8.0 138 10-154 29-188 (215)
66 3m6w_A RRNA methylase; rRNA me 97.2 0.00048 1.6E-08 68.5 7.0 84 10-95 100-188 (464)
67 1o54_A SAM-dependent O-methylt 97.2 0.0027 9.2E-08 58.4 11.7 114 12-153 113-234 (277)
68 2jjq_A Uncharacterized RNA met 97.1 0.0004 1.4E-08 68.5 5.7 69 11-87 290-363 (425)
69 1iy9_A Spermidine synthase; ro 97.1 0.012 4.1E-07 54.2 15.4 150 11-178 75-236 (275)
70 3m4x_A NOL1/NOP2/SUN family pr 97.1 0.00032 1.1E-08 69.6 4.9 82 10-95 104-193 (456)
71 2frx_A Hypothetical protein YE 97.1 0.00081 2.8E-08 67.3 7.8 82 11-95 117-205 (479)
72 2fhp_A Methylase, putative; al 97.1 0.00045 1.5E-08 59.2 5.0 74 11-86 44-125 (187)
73 3ldg_A Putative uncharacterize 97.1 0.00065 2.2E-08 66.0 6.6 106 11-127 194-343 (384)
74 1l3i_A Precorrin-6Y methyltran 97.1 0.0034 1.2E-07 53.5 10.5 119 11-157 33-159 (192)
75 3axs_A Probable N(2),N(2)-dime 97.1 0.00028 9.6E-09 68.7 3.9 73 12-88 53-136 (392)
76 3mb5_A SAM-dependent methyltra 97.1 0.0049 1.7E-07 55.6 12.0 113 11-151 93-215 (255)
77 2ipx_A RRNA 2'-O-methyltransfe 97.1 0.014 4.7E-07 52.0 14.7 145 11-178 77-232 (233)
78 1y8c_A S-adenosylmethionine-de 97.1 0.0071 2.4E-07 53.8 12.8 68 11-85 37-109 (246)
79 3bzb_A Uncharacterized protein 97.1 0.0061 2.1E-07 56.3 12.6 129 11-155 79-234 (281)
80 1ws6_A Methyltransferase; stru 97.1 0.00069 2.4E-08 57.0 5.6 75 11-88 41-121 (171)
81 2fca_A TRNA (guanine-N(7)-)-me 97.0 0.0049 1.7E-07 54.4 11.4 133 11-155 38-176 (213)
82 1yb2_A Hypothetical protein TA 97.0 0.0055 1.9E-07 56.3 12.1 114 11-154 110-233 (275)
83 1nv8_A HEMK protein; class I a 97.0 0.00096 3.3E-08 62.0 7.0 74 12-92 124-207 (284)
84 2pt6_A Spermidine synthase; tr 97.0 0.006 2E-07 57.6 12.5 147 12-178 117-277 (321)
85 1fbn_A MJ fibrillarin homologu 97.0 0.017 5.9E-07 51.3 14.8 143 11-178 74-228 (230)
86 3ll7_A Putative methyltransfer 97.0 0.00059 2E-08 66.7 5.1 121 12-145 94-222 (410)
87 2vdv_E TRNA (guanine-N(7)-)-me 97.0 0.0046 1.6E-07 55.8 10.9 129 11-150 49-191 (246)
88 3mti_A RRNA methylase; SAM-dep 97.0 0.0078 2.7E-07 51.3 11.8 136 11-155 22-166 (185)
89 4df3_A Fibrillarin-like rRNA/T 97.0 0.0079 2.7E-07 54.1 12.2 146 10-176 76-230 (233)
90 2ih2_A Modification methylase 97.0 0.0019 6.5E-08 63.0 8.8 152 12-178 40-211 (421)
91 3tqs_A Ribosomal RNA small sub 97.0 0.0011 3.7E-08 60.7 6.5 72 11-86 29-105 (255)
92 3ftd_A Dimethyladenosine trans 96.9 0.0011 3.7E-08 60.4 6.2 71 11-86 31-104 (249)
93 2dul_A N(2),N(2)-dimethylguano 96.9 0.00056 1.9E-08 66.3 4.5 73 12-88 48-142 (378)
94 3iv6_A Putative Zn-dependent a 96.9 0.002 6.8E-08 59.1 7.9 76 11-90 45-123 (261)
95 1g8a_A Fibrillarin-like PRE-rR 96.9 0.012 4.2E-07 52.0 12.8 144 11-177 73-226 (227)
96 3dmg_A Probable ribosomal RNA 96.9 0.003 1E-07 61.3 9.3 105 11-129 233-342 (381)
97 2h1r_A Dimethyladenosine trans 96.9 0.0011 3.6E-08 62.2 5.9 72 11-90 42-119 (299)
98 3gru_A Dimethyladenosine trans 96.9 0.0009 3.1E-08 62.6 5.4 71 11-87 50-124 (295)
99 1o9g_A RRNA methyltransferase; 96.9 0.0025 8.4E-08 57.7 8.1 45 11-56 51-97 (250)
100 3dh0_A SAM dependent methyltra 96.9 0.0054 1.9E-07 53.8 10.1 129 11-155 37-178 (219)
101 4gek_A TRNA (CMO5U34)-methyltr 96.8 0.0029 1E-07 57.9 8.4 104 11-130 70-181 (261)
102 1sqg_A SUN protein, FMU protei 96.8 0.0015 5.2E-08 64.3 6.8 84 10-95 245-333 (429)
103 2h00_A Methyltransferase 10 do 96.8 0.0016 5.6E-08 58.9 6.6 78 11-91 65-154 (254)
104 2pwy_A TRNA (adenine-N(1)-)-me 96.8 0.013 4.5E-07 52.7 12.6 114 11-152 96-218 (258)
105 2yxl_A PH0851 protein, 450AA l 96.8 0.002 7E-08 63.8 7.7 82 11-95 259-348 (450)
106 3k0b_A Predicted N6-adenine-sp 96.8 0.00078 2.7E-08 65.6 4.5 107 11-128 201-351 (393)
107 3id6_C Fibrillarin-like rRNA/T 96.8 0.014 4.9E-07 52.4 12.5 147 10-178 75-231 (232)
108 3bkw_A MLL3908 protein, S-aden 96.8 0.0085 2.9E-07 53.3 10.9 71 11-86 43-116 (243)
109 3m70_A Tellurite resistance pr 96.8 0.0044 1.5E-07 57.1 9.2 91 11-116 120-215 (286)
110 3bwc_A Spermidine synthase; SA 96.8 0.0096 3.3E-07 55.7 11.6 151 11-178 95-258 (304)
111 3g89_A Ribosomal RNA small sub 96.8 0.0065 2.2E-07 55.2 10.2 144 10-178 79-229 (249)
112 3ldu_A Putative methylase; str 96.8 0.001 3.4E-08 64.7 4.8 106 11-127 195-344 (385)
113 2nxc_A L11 mtase, ribosomal pr 96.8 0.0046 1.6E-07 56.2 9.0 118 11-156 120-242 (254)
114 4dcm_A Ribosomal RNA large sub 96.8 0.003 1E-07 61.1 8.0 104 13-129 224-336 (375)
115 3ou2_A SAM-dependent methyltra 96.7 0.0088 3E-07 52.2 10.5 128 11-157 46-204 (218)
116 3dlc_A Putative S-adenosyl-L-m 96.7 0.0066 2.3E-07 52.9 9.5 124 14-156 46-201 (219)
117 3hp7_A Hemolysin, putative; st 96.7 0.015 5E-07 54.2 12.2 142 11-171 85-244 (291)
118 3l8d_A Methyltransferase; stru 96.7 0.0093 3.2E-07 53.1 10.6 126 11-155 53-197 (242)
119 2b3t_A Protein methyltransfera 96.7 0.003 1E-07 58.1 7.4 130 11-153 109-258 (276)
120 3jwg_A HEN1, methyltransferase 96.7 0.02 6.8E-07 50.2 12.5 70 11-84 29-109 (219)
121 3m33_A Uncharacterized protein 96.7 0.0053 1.8E-07 54.5 8.6 114 11-154 48-163 (226)
122 1mjf_A Spermidine synthase; sp 96.7 0.032 1.1E-06 51.5 14.1 147 12-178 76-239 (281)
123 2i62_A Nicotinamide N-methyltr 96.7 0.0073 2.5E-07 54.5 9.6 158 10-178 55-261 (265)
124 1zq9_A Probable dimethyladenos 96.7 0.0019 6.5E-08 60.0 5.7 73 11-91 28-107 (285)
125 3jwh_A HEN1; methyltransferase 96.7 0.011 3.9E-07 51.7 10.5 72 11-86 29-111 (217)
126 1xdz_A Methyltransferase GIDB; 96.6 0.012 3.9E-07 52.8 10.7 143 11-179 70-220 (240)
127 1m6y_A S-adenosyl-methyltransf 96.6 0.004 1.4E-07 58.3 7.7 79 11-91 26-112 (301)
128 2i7c_A Spermidine synthase; tr 96.6 0.021 7.3E-07 52.7 12.3 149 11-178 78-239 (283)
129 3dxy_A TRNA (guanine-N(7)-)-me 96.5 0.0083 2.8E-07 53.3 8.8 127 11-148 34-166 (218)
130 1qam_A ERMC' methyltransferase 96.5 0.0045 1.5E-07 56.0 7.1 71 11-87 30-104 (244)
131 3f4k_A Putative methyltransfer 96.5 0.018 6.3E-07 51.7 11.2 126 10-154 45-192 (257)
132 3hm2_A Precorrin-6Y C5,15-meth 96.5 0.024 8.3E-07 47.6 11.3 119 10-155 24-150 (178)
133 3ujc_A Phosphoethanolamine N-m 96.5 0.012 3.9E-07 53.1 9.8 128 10-154 54-202 (266)
134 1xxl_A YCGJ protein; structura 96.5 0.017 5.9E-07 51.5 10.8 102 10-130 20-127 (239)
135 3i9f_A Putative type 11 methyl 96.5 0.027 9.2E-07 47.1 11.3 137 11-179 17-161 (170)
136 1dus_A MJ0882; hypothetical pr 96.5 0.0075 2.6E-07 51.4 7.8 70 11-87 52-129 (194)
137 3uwp_A Histone-lysine N-methyl 96.4 0.0078 2.7E-07 58.7 8.5 104 10-131 172-292 (438)
138 2oyr_A UPF0341 protein YHIQ; a 96.4 0.0019 6.6E-08 59.1 4.1 70 13-87 90-174 (258)
139 2pxx_A Uncharacterized protein 96.4 0.0048 1.6E-07 53.7 6.4 75 10-89 41-119 (215)
140 2ar0_A M.ecoki, type I restric 96.4 0.0092 3.1E-07 60.5 9.4 80 11-92 169-276 (541)
141 2xvm_A Tellurite resistance pr 96.4 0.0095 3.3E-07 51.1 8.3 99 12-128 33-137 (199)
142 2r6z_A UPF0341 protein in RSP 96.4 0.0028 9.5E-08 58.0 4.9 72 12-87 84-171 (258)
143 2okc_A Type I restriction enzy 96.4 0.025 8.5E-07 55.8 12.1 78 11-92 171-268 (445)
144 3d2l_A SAM-dependent methyltra 96.3 0.068 2.3E-06 47.3 13.6 66 12-85 34-104 (243)
145 1pjz_A Thiopurine S-methyltran 96.3 0.0062 2.1E-07 53.3 6.4 69 11-84 22-108 (203)
146 3tfw_A Putative O-methyltransf 96.3 0.012 4E-07 53.2 8.3 100 11-130 63-172 (248)
147 1ve3_A Hypothetical protein PH 96.2 0.0075 2.6E-07 53.1 6.5 69 12-86 39-112 (227)
148 2qfm_A Spermine synthase; sper 96.2 0.059 2E-06 51.5 13.0 152 11-178 188-361 (364)
149 4fzv_A Putative methyltransfer 96.2 0.006 2.1E-07 58.5 6.1 79 9-90 146-236 (359)
150 3vc1_A Geranyl diphosphate 2-C 96.1 0.028 9.5E-07 52.4 10.5 126 10-155 116-266 (312)
151 3ggd_A SAM-dependent methyltra 96.1 0.024 8.3E-07 50.6 9.6 107 10-130 55-166 (245)
152 4htf_A S-adenosylmethionine-de 96.1 0.025 8.7E-07 51.8 9.8 70 12-86 69-145 (285)
153 3adn_A Spermidine synthase; am 96.1 0.098 3.3E-06 48.6 13.7 151 11-179 83-246 (294)
154 1vl5_A Unknown conserved prote 96.1 0.033 1.1E-06 50.2 10.3 100 11-129 37-142 (260)
155 3duw_A OMT, O-methyltransferas 96.1 0.018 6E-07 50.7 8.2 100 11-130 58-169 (223)
156 3pfg_A N-methyltransferase; N, 96.0 0.008 2.7E-07 54.5 6.1 68 11-85 50-118 (263)
157 3opn_A Putative hemolysin; str 96.0 0.046 1.6E-06 48.9 11.0 147 11-177 37-201 (232)
158 2avn_A Ubiquinone/menaquinone 96.0 0.012 4.2E-07 53.2 7.2 90 11-115 54-143 (260)
159 2gb4_A Thiopurine S-methyltran 96.0 0.011 3.7E-07 53.8 6.5 69 11-84 68-159 (252)
160 3uzu_A Ribosomal RNA small sub 95.9 0.009 3.1E-07 55.3 5.9 76 11-86 42-123 (279)
161 2gpy_A O-methyltransferase; st 95.9 0.013 4.5E-07 52.1 6.8 76 12-88 55-137 (233)
162 3v97_A Ribosomal RNA large sub 95.9 0.0082 2.8E-07 62.9 6.2 100 11-117 190-337 (703)
163 3lkd_A Type I restriction-modi 95.9 0.11 3.9E-06 52.4 14.4 77 10-88 220-308 (542)
164 3ofk_A Nodulation protein S; N 95.9 0.0081 2.8E-07 52.6 5.3 70 10-86 50-123 (216)
165 2o07_A Spermidine synthase; st 95.9 0.052 1.8E-06 50.7 11.1 151 11-178 95-256 (304)
166 2b2c_A Spermidine synthase; be 95.9 0.05 1.7E-06 51.1 11.0 147 12-178 109-269 (314)
167 4hc4_A Protein arginine N-meth 95.9 0.012 4E-07 56.9 6.7 65 13-83 85-155 (376)
168 1qyr_A KSGA, high level kasuga 95.9 0.0092 3.1E-07 54.4 5.6 73 11-86 21-99 (252)
169 3lec_A NADB-rossmann superfami 95.9 0.096 3.3E-06 46.8 12.2 120 12-157 22-148 (230)
170 3dli_A Methyltransferase; PSI- 95.9 0.05 1.7E-06 48.4 10.5 125 11-153 41-179 (240)
171 3ocj_A Putative exported prote 95.9 0.045 1.5E-06 50.8 10.4 73 10-86 117-196 (305)
172 3kkz_A Uncharacterized protein 95.8 0.025 8.7E-07 51.2 8.5 75 10-89 45-126 (267)
173 4fsd_A Arsenic methyltransfera 95.8 0.067 2.3E-06 51.5 11.9 129 10-152 82-245 (383)
174 2zfu_A Nucleomethylin, cerebra 95.8 0.11 3.6E-06 45.3 11.9 127 10-179 66-192 (215)
175 3ckk_A TRNA (guanine-N(7)-)-me 95.8 0.057 1.9E-06 48.4 10.3 128 11-149 46-185 (235)
176 3lbf_A Protein-L-isoaspartate 95.7 0.013 4.4E-07 51.1 5.6 72 10-87 76-153 (210)
177 2yvl_A TRMI protein, hypotheti 95.7 0.11 3.9E-06 46.0 12.1 109 11-148 91-206 (248)
178 3tr6_A O-methyltransferase; ce 95.6 0.028 9.5E-07 49.5 7.6 99 12-130 65-176 (225)
179 2oo3_A Protein involved in cat 95.6 0.0055 1.9E-07 56.5 3.0 118 13-150 93-218 (283)
180 2kw5_A SLR1183 protein; struct 95.6 0.016 5.5E-07 50.0 5.9 65 14-84 32-101 (202)
181 3gjy_A Spermidine synthase; AP 95.6 0.056 1.9E-06 50.8 9.9 121 12-148 90-219 (317)
182 3gnl_A Uncharacterized protein 95.6 0.13 4.5E-06 46.4 11.9 117 12-155 22-146 (244)
183 2p35_A Trans-aconitate 2-methy 95.6 0.035 1.2E-06 49.8 8.2 71 11-88 33-106 (259)
184 3r0q_C Probable protein argini 95.5 0.024 8.2E-07 54.7 7.4 69 10-85 62-137 (376)
185 3kr9_A SAM-dependent methyltra 95.5 0.13 4.4E-06 45.9 11.6 118 12-157 16-142 (225)
186 3q7e_A Protein arginine N-meth 95.5 0.041 1.4E-06 52.4 8.9 70 11-86 66-142 (349)
187 1vbf_A 231AA long hypothetical 95.5 0.026 8.9E-07 49.9 7.0 73 11-89 70-146 (231)
188 2yqz_A Hypothetical protein TT 95.5 0.042 1.5E-06 49.3 8.5 71 10-86 38-113 (263)
189 3u81_A Catechol O-methyltransf 95.4 0.014 4.8E-07 51.5 5.0 102 12-130 59-172 (221)
190 1nkv_A Hypothetical protein YJ 95.4 0.079 2.7E-06 47.4 10.1 124 11-154 36-183 (256)
191 3hem_A Cyclopropane-fatty-acyl 95.4 0.13 4.4E-06 47.5 11.7 68 10-86 71-146 (302)
192 3ccf_A Cyclopropane-fatty-acyl 95.4 0.12 4.1E-06 47.1 11.4 88 11-115 57-145 (279)
193 1i9g_A Hypothetical protein RV 95.4 0.069 2.4E-06 48.6 9.8 113 11-151 99-223 (280)
194 1zx0_A Guanidinoacetate N-meth 95.3 0.02 6.9E-07 51.0 5.6 70 11-83 60-134 (236)
195 2avd_A Catechol-O-methyltransf 95.3 0.051 1.7E-06 47.9 8.1 74 12-86 70-154 (229)
196 2o57_A Putative sarcosine dime 95.3 0.12 4E-06 47.5 10.9 127 10-155 81-231 (297)
197 1kpg_A CFA synthase;, cyclopro 95.3 0.087 3E-06 48.1 9.9 98 11-128 64-169 (287)
198 2fyt_A Protein arginine N-meth 95.2 0.027 9.1E-07 53.5 6.5 69 11-85 64-139 (340)
199 2fk8_A Methoxy mycolic acid sy 95.2 0.12 4.2E-06 48.0 10.9 99 11-129 90-196 (318)
200 1nt2_A Fibrillarin-like PRE-rR 95.2 0.53 1.8E-05 41.1 14.4 144 11-177 57-209 (210)
201 1uir_A Polyamine aminopropyltr 95.2 0.063 2.2E-06 50.3 8.8 148 12-178 78-242 (314)
202 3bus_A REBM, methyltransferase 95.2 0.1 3.5E-06 47.2 10.0 126 11-155 61-213 (273)
203 2p7i_A Hypothetical protein; p 95.1 0.033 1.1E-06 49.4 6.5 68 11-85 42-111 (250)
204 3g2m_A PCZA361.24; SAM-depende 95.1 0.028 9.6E-07 52.0 6.2 64 14-84 85-157 (299)
205 1wzn_A SAM-dependent methyltra 95.1 0.047 1.6E-06 48.8 7.4 67 11-84 41-112 (252)
206 3ege_A Putative methyltransfer 95.1 0.025 8.7E-07 51.2 5.7 100 10-129 33-132 (261)
207 1ri5_A MRNA capping enzyme; me 95.1 0.027 9.3E-07 51.6 5.9 71 11-85 64-141 (298)
208 3s1s_A Restriction endonucleas 95.0 0.42 1.4E-05 50.3 15.1 75 11-87 321-409 (878)
209 2b25_A Hypothetical protein; s 95.0 0.035 1.2E-06 52.4 6.6 74 11-86 105-196 (336)
210 3ntv_A MW1564 protein; rossman 95.0 0.038 1.3E-06 49.2 6.6 73 12-86 72-151 (232)
211 1i1n_A Protein-L-isoaspartate 95.0 0.026 9E-07 49.7 5.4 74 10-87 76-161 (226)
212 2gs9_A Hypothetical protein TT 95.0 0.035 1.2E-06 48.2 6.1 67 11-85 36-103 (211)
213 3bxo_A N,N-dimethyltransferase 95.0 0.036 1.2E-06 48.9 6.2 66 11-83 40-106 (239)
214 2zig_A TTHA0409, putative modi 95.0 0.02 7E-07 53.2 4.6 45 10-57 234-278 (297)
215 2g72_A Phenylethanolamine N-me 94.9 0.17 5.7E-06 46.4 10.9 158 11-179 71-280 (289)
216 1g6q_1 HnRNP arginine N-methyl 94.9 0.052 1.8E-06 51.2 7.4 69 12-86 39-114 (328)
217 3gu3_A Methyltransferase; alph 94.9 0.11 3.9E-06 47.5 9.5 101 9-129 20-128 (284)
218 1ej0_A FTSJ; methyltransferase 94.8 0.22 7.4E-06 41.1 10.4 73 11-90 22-101 (180)
219 1vlm_A SAM-dependent methyltra 94.8 0.31 1.1E-05 42.4 11.9 120 12-155 48-185 (219)
220 3g5t_A Trans-aconitate 3-methy 94.8 0.084 2.9E-06 48.7 8.5 94 10-116 35-141 (299)
221 1sui_A Caffeoyl-COA O-methyltr 94.8 0.043 1.5E-06 49.5 6.3 99 12-130 80-192 (247)
222 3dou_A Ribosomal RNA large sub 94.8 0.018 6.2E-07 49.9 3.6 68 11-88 25-102 (191)
223 2pbf_A Protein-L-isoaspartate 94.7 0.046 1.6E-06 48.2 6.2 79 10-88 79-173 (227)
224 4azs_A Methyltransferase WBDD; 94.7 0.026 8.9E-07 57.5 5.0 71 10-84 65-141 (569)
225 3c3y_A Pfomt, O-methyltransfer 94.4 0.06 2E-06 48.1 6.3 76 12-87 71-157 (237)
226 3htx_A HEN1; HEN1, small RNA m 94.4 0.4 1.4E-05 50.7 13.1 71 11-84 721-803 (950)
227 3cc8_A Putative methyltransfer 94.3 0.076 2.6E-06 46.3 6.7 72 10-86 31-102 (230)
228 4hg2_A Methyltransferase type 94.3 0.023 7.8E-07 51.8 3.3 113 12-146 40-153 (257)
229 2pjd_A Ribosomal RNA small sub 94.3 0.024 8.2E-07 53.8 3.6 71 12-88 197-272 (343)
230 3thr_A Glycine N-methyltransfe 94.3 0.058 2E-06 49.5 6.0 71 11-84 57-137 (293)
231 3dr5_A Putative O-methyltransf 94.2 0.05 1.7E-06 48.2 5.3 100 12-130 57-165 (221)
232 2r3s_A Uncharacterized protein 94.2 0.13 4.4E-06 48.1 8.4 127 10-155 164-320 (335)
233 2y1w_A Histone-arginine methyl 94.1 0.074 2.5E-06 50.5 6.5 69 11-86 50-125 (348)
234 1dl5_A Protein-L-isoaspartate 94.0 0.1 3.4E-06 48.8 7.1 76 11-89 75-156 (317)
235 1jsx_A Glucose-inhibited divis 94.0 0.043 1.5E-06 47.4 4.3 67 12-83 66-138 (207)
236 3b3j_A Histone-arginine methyl 93.9 0.086 3E-06 52.5 6.7 69 11-86 158-233 (480)
237 2p8j_A S-adenosylmethionine-de 93.8 0.16 5.4E-06 43.7 7.6 71 10-86 22-98 (209)
238 1yub_A Ermam, rRNA methyltrans 93.8 0.006 2.1E-07 55.1 -1.8 71 11-87 29-103 (245)
239 3r3h_A O-methyltransferase, SA 93.7 0.033 1.1E-06 50.2 2.9 102 12-130 61-172 (242)
240 1p91_A Ribosomal RNA large sub 93.6 0.12 4.2E-06 46.6 6.8 68 11-84 85-155 (269)
241 3mq2_A 16S rRNA methyltransfer 93.6 0.12 4.2E-06 45.0 6.5 132 11-155 27-181 (218)
242 1jg1_A PIMT;, protein-L-isoasp 93.5 0.1 3.6E-06 46.2 6.0 72 11-88 91-169 (235)
243 3bgv_A MRNA CAP guanine-N7 met 93.5 0.098 3.3E-06 48.6 6.1 73 11-85 34-122 (313)
244 3mgg_A Methyltransferase; NYSG 93.5 0.14 4.7E-06 46.4 6.9 102 10-128 36-143 (276)
245 2a14_A Indolethylamine N-methy 93.3 0.047 1.6E-06 49.6 3.4 45 10-56 54-98 (263)
246 3orh_A Guanidinoacetate N-meth 93.3 0.11 3.6E-06 46.4 5.7 71 11-84 60-135 (236)
247 3khk_A Type I restriction-modi 93.3 0.074 2.5E-06 53.8 5.2 74 13-88 246-340 (544)
248 2yxe_A Protein-L-isoaspartate 93.3 0.18 6.1E-06 43.8 7.0 76 10-88 76-157 (215)
249 3c3p_A Methyltransferase; NP_9 93.2 0.059 2E-06 46.9 3.7 71 12-85 57-134 (210)
250 1r18_A Protein-L-isoaspartate( 93.2 0.099 3.4E-06 46.1 5.2 74 10-88 83-174 (227)
251 2hnk_A SAM-dependent O-methylt 93.0 0.24 8.3E-06 43.9 7.6 57 12-68 61-124 (239)
252 3g07_A 7SK snRNA methylphospha 92.7 0.26 8.7E-06 45.4 7.6 44 11-56 46-90 (292)
253 1xj5_A Spermidine synthase 1; 92.6 0.13 4.5E-06 48.6 5.5 74 11-86 120-203 (334)
254 2plw_A Ribosomal RNA methyltra 92.5 0.09 3.1E-06 45.1 3.8 52 12-69 23-76 (201)
255 2cmg_A Spermidine synthase; tr 92.4 0.11 3.9E-06 47.3 4.6 133 12-178 73-216 (262)
256 3cbg_A O-methyltransferase; cy 91.9 0.16 5.6E-06 45.0 5.0 74 12-86 73-157 (232)
257 3dp7_A SAM-dependent methyltra 91.6 1.2 4E-05 42.3 10.9 128 11-153 179-337 (363)
258 1qzz_A RDMB, aclacinomycin-10- 91.5 0.71 2.4E-05 43.7 9.3 146 11-179 182-357 (374)
259 2k4m_A TR8_protein, UPF0146 pr 91.5 0.11 3.7E-06 43.0 2.9 75 12-117 36-113 (153)
260 1tw3_A COMT, carminomycin 4-O- 91.5 0.69 2.4E-05 43.6 9.2 126 11-155 183-336 (360)
261 1x19_A CRTF-related protein; m 91.4 0.54 1.9E-05 44.4 8.4 126 11-154 190-344 (359)
262 3gwz_A MMCR; methyltransferase 91.1 1.3 4.3E-05 42.2 10.6 127 11-156 202-354 (369)
263 2xyq_A Putative 2'-O-methyl tr 90.8 1.7 5.9E-05 40.0 10.8 119 11-152 63-191 (290)
264 2nyu_A Putative ribosomal RNA 90.6 0.22 7.5E-06 42.4 4.3 69 12-86 23-106 (196)
265 3fzg_A 16S rRNA methylase; met 90.5 0.37 1.3E-05 41.8 5.6 68 12-84 50-122 (200)
266 3fpf_A Mtnas, putative unchara 90.4 0.73 2.5E-05 42.7 7.9 98 10-132 121-226 (298)
267 1u2z_A Histone-lysine N-methyl 90.0 0.94 3.2E-05 44.3 8.7 40 11-52 242-282 (433)
268 4e2x_A TCAB9; kijanose, tetron 89.8 1.8 6.1E-05 41.7 10.6 128 11-156 107-251 (416)
269 2ip2_A Probable phenazine-spec 89.6 0.69 2.4E-05 43.1 7.2 125 13-155 169-319 (334)
270 1wg8_A Predicted S-adenosylmet 89.3 0.61 2.1E-05 42.8 6.3 72 12-87 23-99 (285)
271 2bm8_A Cephalosporin hydroxyla 89.1 0.17 5.8E-06 45.2 2.4 72 12-84 82-159 (236)
272 4gqb_A Protein arginine N-meth 89.1 0.25 8.6E-06 50.7 3.9 69 10-82 356-433 (637)
273 2oxt_A Nucleoside-2'-O-methylt 88.8 0.062 2.1E-06 49.1 -0.8 65 12-85 75-148 (265)
274 3frh_A 16S rRNA methylase; met 88.2 0.86 2.9E-05 41.0 6.4 66 11-84 105-175 (253)
275 3ufb_A Type I restriction-modi 87.8 1.2 4.1E-05 44.8 7.9 77 11-87 217-312 (530)
276 3mcz_A O-methyltransferase; ad 87.7 2.8 9.7E-05 39.1 10.2 128 12-155 180-336 (352)
277 2qe6_A Uncharacterized protein 87.5 3.6 0.00012 37.2 10.4 106 12-131 78-200 (274)
278 1boo_A Protein (N-4 cytosine-s 87.4 0.51 1.7E-05 44.3 4.6 46 10-58 251-296 (323)
279 2wa2_A Non-structural protein 87.4 0.12 4.2E-06 47.4 0.3 66 11-85 82-156 (276)
280 2vdw_A Vaccinia virus capping 87.3 0.61 2.1E-05 43.2 5.1 44 12-57 49-92 (302)
281 4auk_A Ribosomal RNA large sub 87.2 2.9 9.9E-05 39.9 9.7 138 10-177 210-354 (375)
282 3ua3_A Protein arginine N-meth 86.3 0.33 1.1E-05 50.2 2.8 101 11-125 409-530 (745)
283 3lcv_B Sisomicin-gentamicin re 86.2 0.37 1.3E-05 43.9 2.8 131 12-159 133-273 (281)
284 3p2e_A 16S rRNA methylase; met 85.6 0.6 2.1E-05 41.2 3.9 76 11-89 24-109 (225)
285 3i53_A O-methyltransferase; CO 84.0 5.1 0.00017 37.1 9.8 126 12-156 170-319 (332)
286 1eg2_A Modification methylase 83.7 0.81 2.8E-05 42.8 4.0 46 10-58 241-289 (319)
287 1i4w_A Mitochondrial replicati 81.3 2.3 7.7E-05 40.4 6.1 57 11-69 58-118 (353)
288 1fp2_A Isoflavone O-methyltran 81.0 2.7 9.2E-05 39.4 6.6 126 12-155 189-338 (352)
289 3bkx_A SAM-dependent methyltra 80.3 2 6.8E-05 38.4 5.2 75 11-87 43-132 (275)
290 3lst_A CALO1 methyltransferase 79.4 9.1 0.00031 35.7 9.7 125 11-157 184-335 (348)
291 2ld4_A Anamorsin; methyltransf 79.0 7.9 0.00027 31.8 8.3 117 11-157 12-134 (176)
292 3c6k_A Spermine synthase; sper 78.2 30 0.001 33.0 12.8 156 12-179 206-379 (381)
293 1zg3_A Isoflavanone 4'-O-methy 74.4 6.7 0.00023 36.7 7.3 126 12-155 194-344 (358)
294 3reo_A (ISO)eugenol O-methyltr 71.0 4.9 0.00017 38.0 5.4 100 11-130 203-303 (368)
295 2aot_A HMT, histamine N-methyl 70.8 6.7 0.00023 35.5 6.1 106 10-128 51-173 (292)
296 3sso_A Methyltransferase; macr 70.0 2.7 9.3E-05 40.6 3.3 69 11-83 216-294 (419)
297 3u3x_A Oxidoreductase; structu 67.0 75 0.0026 29.5 12.9 69 12-86 26-97 (361)
298 2p41_A Type II methyltransfera 66.8 2.8 9.6E-05 38.8 2.6 68 12-88 83-159 (305)
299 2dpm_A M.dpnii 1, protein (ade 66.7 4 0.00014 37.4 3.6 38 13-55 37-74 (284)
300 3p9c_A Caffeic acid O-methyltr 64.9 7.7 0.00026 36.6 5.4 100 11-130 201-301 (364)
301 1af7_A Chemotaxis receptor met 64.8 5.6 0.00019 36.2 4.2 45 11-56 105-157 (274)
302 3tka_A Ribosomal RNA small sub 64.3 11 0.00039 35.3 6.2 79 11-91 57-142 (347)
303 1fp1_D Isoliquiritigenin 2'-O- 63.7 5.2 0.00018 37.8 3.9 99 11-130 209-309 (372)
304 3fwz_A Inner membrane protein 62.8 19 0.00064 28.5 6.6 63 18-86 11-80 (140)
305 3l4b_C TRKA K+ channel protien 59.7 18 0.00062 31.0 6.5 64 18-86 4-74 (218)
306 2g1p_A DNA adenine methylase; 59.2 5.2 0.00018 36.4 2.9 39 13-56 29-67 (278)
307 3gcz_A Polyprotein; flavivirus 58.9 4.8 0.00016 36.7 2.5 33 12-46 91-124 (282)
308 3evf_A RNA-directed RNA polyme 56.5 5 0.00017 36.5 2.2 31 13-45 76-107 (277)
309 3llv_A Exopolyphosphatase-rela 55.7 25 0.00086 27.5 6.3 65 18-86 10-79 (141)
310 1lss_A TRK system potassium up 55.2 24 0.00081 27.2 6.0 63 19-86 9-78 (140)
311 4a6d_A Hydroxyindole O-methylt 54.9 42 0.0014 31.2 8.6 122 13-153 181-329 (353)
312 2p2s_A Putative oxidoreductase 54.3 67 0.0023 29.4 9.8 69 12-86 4-75 (336)
313 3l9w_A Glutathione-regulated p 51.2 58 0.002 31.2 9.0 63 18-86 8-77 (413)
314 4h3v_A Oxidoreductase domain p 51.0 18 0.00062 33.7 5.4 77 9-91 3-90 (390)
315 3uuw_A Putative oxidoreductase 46.7 1.3E+02 0.0044 26.9 10.4 65 11-86 5-75 (308)
316 1yf3_A DNA adenine methylase; 45.5 7.1 0.00024 35.1 1.4 40 13-58 26-65 (259)
317 1h6d_A Precursor form of gluco 45.5 2E+02 0.0069 27.3 12.0 69 10-86 81-159 (433)
318 3dty_A Oxidoreductase, GFO/IDH 44.7 2E+02 0.0068 26.9 11.7 77 9-86 9-94 (398)
319 3p8z_A Mtase, non-structural p 44.7 12 0.00041 33.4 2.6 35 11-47 78-113 (267)
320 1zh8_A Oxidoreductase; TM0312, 43.1 1.9E+02 0.0066 26.3 12.7 72 11-86 17-91 (340)
321 3c85_A Putative glutathione-re 42.9 51 0.0017 27.0 6.4 63 18-86 43-114 (183)
322 4fb5_A Probable oxidoreductase 42.1 32 0.0011 32.0 5.6 71 8-86 21-103 (393)
323 2ixa_A Alpha-N-acetylgalactosa 40.5 1.9E+02 0.0066 27.5 11.1 69 10-86 18-100 (444)
324 3lkz_A Non-structural protein 40.0 11 0.00037 34.8 1.6 34 12-47 95-129 (321)
325 3eld_A Methyltransferase; flav 39.8 18 0.00063 33.1 3.2 34 11-46 81-115 (300)
326 3ohs_X Trans-1,2-dihydrobenzen 39.3 2.2E+02 0.0075 25.7 11.8 69 12-86 2-75 (334)
327 3v5n_A Oxidoreductase; structu 38.2 2.6E+02 0.0089 26.3 11.7 81 5-86 30-119 (417)
328 3e9m_A Oxidoreductase, GFO/IDH 37.8 1.2E+02 0.004 27.7 8.6 67 12-86 5-76 (330)
329 3o4f_A Spermidine synthase; am 37.2 2.4E+02 0.0081 25.6 14.2 149 12-179 84-246 (294)
330 3ged_A Short-chain dehydrogena 35.9 27 0.00092 31.0 3.7 58 24-84 17-82 (247)
331 2ho3_A Oxidoreductase, GFO/IDH 35.6 2.4E+02 0.0084 25.2 10.6 61 19-86 6-71 (325)
332 4gqa_A NAD binding oxidoreduct 35.1 32 0.0011 32.7 4.3 47 36-86 59-105 (412)
333 3ec7_A Putative dehydrogenase; 34.4 2.2E+02 0.0076 26.1 10.1 71 8-86 19-96 (357)
334 3btv_A Galactose/lactose metab 34.4 3.1E+02 0.011 26.0 11.4 69 12-86 20-98 (438)
335 3rc1_A Sugar 3-ketoreductase; 33.2 2.8E+02 0.0097 25.3 11.1 67 11-86 26-98 (350)
336 3kux_A Putative oxidoreductase 32.2 2.9E+02 0.01 25.1 11.8 64 12-86 7-76 (352)
337 3db2_A Putative NADPH-dependen 32.0 2.9E+02 0.01 25.1 11.4 66 12-86 5-75 (354)
338 3giw_A Protein of unknown func 30.4 35 0.0012 30.9 3.5 54 13-69 80-144 (277)
339 2py6_A Methyltransferase FKBM; 29.2 77 0.0026 30.2 5.9 48 10-57 225-273 (409)
340 3m2t_A Probable dehydrogenase; 28.4 64 0.0022 30.0 5.1 67 12-86 5-77 (359)
341 3oqb_A Oxidoreductase; structu 27.3 3.2E+02 0.011 25.1 10.0 76 11-90 5-97 (383)
342 4fgs_A Probable dehydrogenase 27.0 62 0.0021 29.1 4.5 68 14-84 30-110 (273)
343 3euw_A MYO-inositol dehydrogen 26.6 71 0.0024 29.3 5.1 65 13-86 5-74 (344)
344 2lci_A Protein OR36; structura 26.3 71 0.0024 23.7 3.8 47 104-155 61-107 (134)
345 3moi_A Probable dehydrogenase; 26.1 3.9E+02 0.013 24.6 11.5 68 12-86 2-73 (387)
346 3q2i_A Dehydrogenase; rossmann 25.7 1.4E+02 0.0047 27.4 6.9 70 10-86 11-84 (354)
347 2tmg_A Protein (glutamate dehy 25.2 1.3E+02 0.0043 29.0 6.5 66 18-88 213-293 (415)
348 1id1_A Putative potassium chan 25.0 1.6E+02 0.0055 23.0 6.4 63 19-86 8-80 (153)
349 3ic5_A Putative saccharopine d 24.9 2E+02 0.0068 20.8 7.0 69 12-86 5-78 (118)
350 3pwz_A Shikimate dehydrogenase 24.8 1.7E+02 0.0059 26.0 7.1 67 14-88 122-192 (272)
351 4had_A Probable oxidoreductase 24.8 1.3E+02 0.0044 27.5 6.5 69 10-86 21-95 (350)
352 1ydw_A AX110P-like protein; st 23.9 4.1E+02 0.014 24.1 10.4 67 12-86 6-80 (362)
353 1p3y_1 MRSD protein; flavoprot 23.9 1E+02 0.0034 26.2 5.0 134 1-152 1-148 (194)
354 2nvw_A Galactose/lactose metab 23.0 3.8E+02 0.013 25.8 9.8 53 28-86 61-117 (479)
355 1kjn_A MTH0777; hypotethical p 22.2 1.3E+02 0.0043 24.6 4.9 56 25-84 28-85 (157)
356 2glx_A 1,5-anhydro-D-fructose 22.1 4.2E+02 0.014 23.6 11.5 62 19-86 5-71 (332)
357 3ezy_A Dehydrogenase; structur 21.1 1.8E+02 0.0062 26.5 6.7 67 12-86 2-73 (344)
358 4hp8_A 2-deoxy-D-gluconate 3-d 20.5 1.3E+02 0.0043 26.6 5.1 56 25-83 25-85 (247)
359 1tlt_A Putative oxidoreductase 20.2 4.4E+02 0.015 23.4 9.1 64 12-86 5-74 (319)
360 2fgc_A Acetolactate synthase, 20.1 1.2E+02 0.0042 25.7 4.7 45 123-176 33-78 (193)
No 1
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=100.00 E-value=5.6e-73 Score=544.04 Aligned_cols=314 Identities=34% Similarity=0.661 Sum_probs=272.2
Q ss_pred cCCCCCceEEeeecCchhHHHHHHhcCCCccEE-EEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCC
Q 016377 7 KNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVV-EAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 7 ~~~~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v-~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
.-...+++++|||||+||+++||++||++++++ +|+|+|+.|++||++|||+.++++||++++.++++..++|+|+|||
T Consensus 5 ~m~~~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~~~~~DI~~~~~~~i~~~~~Dil~ggp 84 (327)
T 3qv2_A 5 SMQQKQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEEVQVKNLDSISIKQIESLNCNTWFMSP 84 (327)
T ss_dssp ---CCCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCCCBCCCTTTCCHHHHHHTCCCEEEECC
T ss_pred cccCCCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCCcccCChhhcCHHHhccCCCCEEEecC
Confidence 335568999999999999999999999866699 9999999999999999999989999999999888855699999999
Q ss_pred CCchh--hhccCCCCCCChhhhhHHHHHH-hcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEEEEeCCCCc
Q 016377 86 PCQPY--TRQGLQKQSSDARAFSFLKILE-LIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQF 162 (390)
Q Consensus 86 PCq~f--S~~g~~~~~~d~r~~l~~~~~~-~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l~a~~~ 162 (390)
|||+| |.+|++++.+|+|+.||+++++ ++++++.+|++|+||||+|++++.+++.+++.|+++||.+.+.+|||++|
T Consensus 85 PCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~~~~~~~i~~~l~~~GY~v~~~vl~a~~y 164 (327)
T 3qv2_A 85 PCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKESLVFKEIYNILIKNQYYIKDIICSPIDI 164 (327)
T ss_dssp CCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGGSHHHHHHHHHHHHTTCEEEEEEECGGGG
T ss_pred CccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcChHHHHHHHHHHHhCCCEEEEEEEeHHHc
Confidence 99999 9999999999999999999999 99985226999999999999999999999999999999999999999999
Q ss_pred CCCccCcEEEEEEEeCCCcccccccccccccCCCCCCCCCCccccccCCCCCCccccccccCCchhhhhhccCCCCcccc
Q 016377 163 GVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNT 242 (390)
Q Consensus 163 G~pq~R~R~~~i~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~~~~~~~~ 242 (390)
|+||+|+|+|+||++++ |.+|.|++.. ...+++|+|+....
T Consensus 165 GvPQ~R~R~fivg~r~~------------f~fP~~~~~~---------------------~~~~l~d~Le~~~~------ 205 (327)
T 3qv2_A 165 GIPNSRTRYYVMARLTP------------FKNEIQLHQE---------------------KESMISNYLDNNVN------ 205 (327)
T ss_dssp TCSBCCCEEEEEEESSC------------CCSCCCCCCC---------------------SCCCGGGGCCSSCC------
T ss_pred CCCccceEEEEEEEeCC------------CCCCCccccc---------------------ccccHHHHhccccc------
Confidence 99999999999999987 3457666531 12357788873211
Q ss_pred cccccccCcccccccCCCcccchhcccccccccccchhHHhhhcccccccCCCCcccccccCCcEEeecCCccceeecCC
Q 016377 243 ETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQP 322 (390)
Q Consensus 243 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~p~~~~~~~~~~~y~r~~~~~~~~t~~~~~ 322 (390)
.+|.++.+.+.+++...|++.|++.++.|++++|+++..+.++.++....
T Consensus 206 ------------------------------~~y~l~~~~~~~~~~~~di~~~~~~~~~~~t~~y~~y~~~~gs~l~~~~~ 255 (327)
T 3qv2_A 206 ------------------------------ESYSIPSDLILKKGMLFDIVGKDDKRTCCFTKSYTKIVEGTGSIYCPIEP 255 (327)
T ss_dssp ------------------------------GGGBCCHHHHHHHGGGSCEEETTSSCBCCCCTTTTTSSTTSCCEEESSCS
T ss_pred ------------------------------ccccCCHHHHHhhhcccccccccccccccccccceEEecCCCceeecccc
Confidence 33666777788888999999999999999999999999998887744321
Q ss_pred C--CCCCccccccCccccccHHHHHHhCCCCCCeecC-CCCCHHHHHHHhCCccchHHHHHHHHHHHhcc
Q 016377 323 K--NKGKASSLKEQHLRYFTPREVANLHSFPGDFQFP-HHLSLRQRYALLGNSLSIAVVAPLLQYLFAQA 389 (390)
Q Consensus 323 ~--~~~~~~~ihp~~~R~LT~rE~aRLQgFPd~y~f~-g~~s~~~~y~qiGNAVp~~v~~~I~~~l~~~~ 389 (390)
. ...+...+|+.+.|+|||||+||||||||+|.|+ +++|.+++|+|+||||||+|+++|++.|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~R~lt~~E~~rlqgfP~~~~~~~~~~s~~~~y~~~GNsv~v~v~~~i~~~l~~~l 325 (327)
T 3qv2_A 256 HFIPVKKAEDLLNKNLRYFTPNEIKKIHGFSSNFTTQIDGLTDKQQYQCLGNSVSCFVIAQLMEYLFDDL 325 (327)
T ss_dssp SCCCCSSGGGGTTSCCBCCCHHHHHHHTTCCTTCCSCCTTCCHHHHHHHHHTSCCHHHHHHHHHHHTTTS
T ss_pred cccccCCceeecCCccccCcHHHHHHhCcCCHHHcCCcCCCCHHHHHHHccCccCHHHHHHHHHHHHHHh
Confidence 1 1224556799999999999999999999999999 67899999999999999999999999998764
No 2
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=100.00 E-value=4.8e-72 Score=539.18 Aligned_cols=315 Identities=37% Similarity=0.688 Sum_probs=266.9
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCC-CeecCccccchhhhcccCccEEEeCCCCch
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-PYQGNIQNLTAAELDMYGAHAWLLSPPCQP 89 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~-~~~~di~~~~~~~~~~~~~D~l~~g~PCq~ 89 (390)
|+++++|||||+||+++||++||+.+++|+|+|+|+.|++||++|||+. ++.+||++++.++++..++|+|+||||||+
T Consensus 2 m~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~ 81 (333)
T 4h0n_A 2 MSHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQP 81 (333)
T ss_dssp -CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCCCC
T ss_pred CCCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCCcc
Confidence 6899999999999999999999986679999999999999999999985 578999999998888556999999999999
Q ss_pred hhhccCCCCCCChhhhhHHHHHHhcccccCC-CcEEEEeccccccChHHHHHHHHHHHhCCceeEEEEeCCCCcCCCccC
Q 016377 90 YTRQGLQKQSSDARAFSFLKILELIPHTVKP-PHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSR 168 (390)
Q Consensus 90 fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~-P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l~a~~~G~pq~R 168 (390)
||.+|++++.+|+|+.||++++++++++ + |++|+||||+|+++++.++.+++.|+++||.+.+.+|||++||+||+|
T Consensus 82 fS~ag~~~~~~d~r~~L~~~~~r~i~~~--~~P~~~vlENV~gl~~~~~~~~i~~~l~~~GY~v~~~vl~a~~~GvPQ~R 159 (333)
T 4h0n_A 82 FTRNGKYLDDNDPRTNSFLYLIGILDQL--DNVDYILMENVKGFENSTVRNLFIDKLKECNFIYQEFLLCPSTVGVPNSR 159 (333)
T ss_dssp SEETTEECCTTCTTSCCHHHHHHHGGGC--TTCCEEEEEECTTGGGSHHHHHHHHHHHHTTEEEEEEEECTTTTTCSCCC
T ss_pred hhhhhhccCCcCcccccHHHHHHHHHHh--cCCCEEEEecchhhhhhhHHHHHHHHHHhCCCeEEEEEecHHHcCCCccc
Confidence 9999999999999999999999999998 7 999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEeCCCcccccccccccccCCCCCCCCCCccccccCCCCCCccccccccCCchhhhhhccCCCCcccccccccc
Q 016377 169 PRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLS 248 (390)
Q Consensus 169 ~R~~~i~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~~~~~~~~~~~~~~ 248 (390)
+|+|+||+++++.|.++..+...+.+|.|... ..+++|+|+....
T Consensus 160 ~R~fiva~r~~~~~~f~~~~~~~~~~P~~~~~-----------------------~~~l~d~Le~~~~------------ 204 (333)
T 4h0n_A 160 LRYYCTARRNNLTWPFKRRDEIITRLPKDFGV-----------------------PHSLESIIEEDVD------------ 204 (333)
T ss_dssp CEEEEEEEETTSCCCSCCCSSCBSSCSSCCCS-----------------------CCCSSTTCCSSCC------------
T ss_pred eEEEEEEEeCCCCCCCCcccchhhhCCCCccc-----------------------cccHHHHhccCCc------------
Confidence 99999999999887775555555566665532 2346777764211
Q ss_pred cCcccccccCCCcccchhcccccccccccchhHHhhhcccccccCCCCcccccccCCcEEeecCCccceeecC-------
Q 016377 249 TGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ------- 321 (390)
Q Consensus 249 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~p~~~~~~~~~~~y~r~~~~~~~~t~~~~------- 321 (390)
.+|.++.+.+ ++....|++.|.+.++.|+++.|+++..+.++...+..
T Consensus 205 ------------------------~~y~~~~~~~-~~~~~~d~~~~~~~~~~~~~k~~~~~~~g~gs~~~~~~~~~~~~~ 259 (333)
T 4h0n_A 205 ------------------------EKFLVPEKML-RCAKVFDICYKTSKRSCCFTKAYTHYADGTGSIFTDKPREVVQKC 259 (333)
T ss_dssp ------------------------GGGBCCHHHH-TTGGGCCEECTTCSCCCCCCTTBTTBSSSSCCEECSSCHHHHHHH
T ss_pred ------------------------ccccCCHHHH-HHHHHhccCChhhhhhhhhccccceEEeccCceeccccccchhhh
Confidence 3356666666 66667888888888888899988877777665432211
Q ss_pred ------CCCCCC--ccccccCccccccHHHHHHhCCCCCCeecCCCCCHHHHHHHhCCccchHHHHHHHHHHHh
Q 016377 322 ------PKNKGK--ASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387 (390)
Q Consensus 322 ------~~~~~~--~~~ihp~~~R~LT~rE~aRLQgFPd~y~f~g~~s~~~~y~qiGNAVp~~v~~~I~~~l~~ 387 (390)
+..+.. ...+|+.+.|+||||||||||||||+|+|++.+|.+++|+|+||||+|+|+++|++.|++
T Consensus 260 ~~~~~~~~~G~~~~~~~~~~~~~R~lt~~E~~rl~gfp~~~~~~~~~s~~~~y~~~GNsv~v~v~~~i~~~l~~ 333 (333)
T 4h0n_A 260 YAAAAQNEIGGEKFVELFKELKLRYFTPKEVLMIMCFPKSYNLPTNISMKQCYRLLGNSVNVKVISELLKILFE 333 (333)
T ss_dssp HHHGGGSCTTCHHHHHHHHTTTCBCCCHHHHHHHTTCCTTCCCCTTSCHHHHHHHHHTSCCHHHHHHHHHHHHC
T ss_pred hcccccCCCCcccceeeccCCCcCCCCHHHHHHhCCCCccccCCCCCCHHHHHHHhCCccCHHHHHHHHHHHhC
Confidence 000011 122478999999999999999999999999888999999999999999999999999975
No 3
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=100.00 E-value=4e-71 Score=535.31 Aligned_cols=320 Identities=20% Similarity=0.319 Sum_probs=225.6
Q ss_pred ceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCCCchhhh
Q 016377 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTR 92 (390)
Q Consensus 13 ~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~fS~ 92 (390)
|+|||||||+||+++||++|||+ +++|+|+|+.|++||++|||+.++.+||++++.+++++ +|+|+||||||+||.
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~--~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~--~D~l~ggpPCQ~fS~ 76 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFR--IICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPK--CDGIIGGPPSQSWSE 76 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCE--EEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGSCC--CSEEECCCCGGGTEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCE--EEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhCCc--ccEEEecCCCCCcCC
Confidence 68999999999999999999977 99999999999999999999999999999999999885 999999999999999
Q ss_pred ccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccCh---HHHHHHHHHHHhCCceeEEEEeCCCCcCCCccCc
Q 016377 93 QGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS---DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRP 169 (390)
Q Consensus 93 ~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~---~~~~~~~~~l~~~GY~~~~~~l~a~~~G~pq~R~ 169 (390)
+|++++.+|+|+.||++++|+++++ +|++|+||||+|+++. ..++.+++.|+++||++.+.+|||++||+||+|+
T Consensus 77 ag~~~g~~d~R~~L~~~~~r~i~~~--~Pk~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~~vlna~~yGvPQ~R~ 154 (331)
T 3ubt_Y 77 GGSLRGIDDPRGKLFYEYIRILKQK--KPIFFLAENVKGMMAQRHNKAVQEFIQEFDNAGYDVHIILLNANDYGVAQDRK 154 (331)
T ss_dssp TTEECCTTCGGGHHHHHHHHHHHHH--CCSEEEEEECCGGGGCTTSHHHHHHHHHHHHHTEEEEEEEEEGGGTTCSBCCE
T ss_pred CCCccCCCCchhHHHHHHHHHHhcc--CCeEEEeeeecccccccccchhhhhhhhhccCCcEEEEEecccccCCCCcccc
Confidence 9999999999999999999999999 9999999999999875 4899999999999999999999999999999999
Q ss_pred EEEEEEEeCCCcccccccccccccCCCCCCCCCCccccccCCCCCCccccccccCCchhhhhhccCCCCccccccccccc
Q 016377 170 RYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 249 (390)
Q Consensus 170 R~~~i~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~~~~~~~~~~~~~~~ 249 (390)
|+|+||++++..+++ .+|.|.... .+ +.+.+...... ...........
T Consensus 155 Rvfivg~r~~~~~~~--------~~p~~~~~~--~t---------------------~~d~i~~l~~~-~~~~~~~~~~~ 202 (331)
T 3ubt_Y 155 RVFYIGFRKELNINY--------LPPIPHLIK--PT---------------------FKDVIWDLKDN-PIPALDKNKTN 202 (331)
T ss_dssp EEEEEEEEGGGCCCC--------CCCCCCSCC--CC---------------------GGGTSGGGSSS-CEECBGGGBCC
T ss_pred eEEEEEEcCCCCcCC--------CCCCCcCCC--Cc---------------------HHHHhhhcccC-Ccccccccccc
Confidence 999999999865432 223333221 11 11111110000 00000000000
Q ss_pred CcccccccCCCcccchhcccccccccccchhHHhhhcccccccCCCCcccccccCCcEEeecCCccceeecCCCCCCCcc
Q 016377 250 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKAS 329 (390)
Q Consensus 250 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~p~~~~~~~~~~~y~r~~~~~~~~t~~~~~~~~~~~~ 329 (390)
+.. .+. ..+.. ....+.. ...........-.+... ...+..+.++....+..+.... ......
T Consensus 203 ~~~---~~~-~~~~~------~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 265 (331)
T 3ubt_Y 203 GNK---CIY-PNHEY------FIGSYST---IFMSRNRVRQWNEPAFT--VQASGRQCQLHPQAPVMLKVSK--NLNKFV 265 (331)
T ss_dssp GGG---SSS-TTCEE------CCSCCCT---TGGGSCCBCCTTSCBCC--CCSCSTTCCBCTTSCCCEEEET--TEEECC
T ss_pred ccc---ccc-cchhh------hcccccc---ccccccccccccccccc--ccccCcccccccccceeeeecC--CCCccc
Confidence 000 000 00000 0000000 00000000000001000 0011122333333344433332 122333
Q ss_pred ccccCccccccHHHHHHhCCCCCCeecCCCCCHHHHHHHhCCccchHHHHHHHHHHHhc
Q 016377 330 SLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388 (390)
Q Consensus 330 ~ihp~~~R~LT~rE~aRLQgFPd~y~f~g~~s~~~~y~qiGNAVp~~v~~~I~~~l~~~ 388 (390)
..|+.+.|.||+|||||||||||+|+|++. +.+++|+||||||||+|+++|+++|.++
T Consensus 266 ~~~~~~~R~LT~rE~aRLQgFPd~f~f~~~-s~~~~ykqiGNAVpp~la~~I~~~I~~~ 323 (331)
T 3ubt_Y 266 EGKEHLYRRLTVRECARVQGFPDDFIFHYE-SLNDGYKMIGNAVPVNLAYEIAKTIKSA 323 (331)
T ss_dssp TTCGGGCCBCBHHHHHHHHTCCTTCCCCCS-BHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred CCCCCcCcCCCHHHHHHhCCCCCCCEeCCC-CHHHHhhhCccCccHHHHHHHHHHHHHH
Confidence 457888999999999999999999999744 8999999999999999999999999764
No 4
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=100.00 E-value=1.3e-69 Score=530.83 Aligned_cols=340 Identities=21% Similarity=0.286 Sum_probs=231.4
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhh-----cccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAEL-----DMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~-----~~~~~D~l~~g 84 (390)
|+++++|||||+||+++||+++|++ +++|+|+|+.|++||+.|+|+ .++++||.+++.+++ ...++|+|+||
T Consensus 1 m~~~vidLFsG~GGlslG~~~aG~~--~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~gg 78 (376)
T 3g7u_A 1 MSLNVIDLFSGVGGLSLGAARAGFD--VKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGG 78 (376)
T ss_dssp -CCEEEEETCTTSHHHHHHHHHTCE--EEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEEC
T ss_pred CCCeEEEEccCcCHHHHHHHHCCCc--EEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEec
Confidence 4689999999999999999999976 999999999999999999998 457899999988776 22369999999
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChH---HHHHHHHHHHhCCcee-EEEEeCCC
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMIEILANSDYLT-QEFILSPL 160 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~---~~~~~~~~l~~~GY~~-~~~~l~a~ 160 (390)
||||+||.+|++ +.+|+|+.||++++++|+++ +|++|+||||+|+++.+ .++.++ .|+++||++ .+.+|||.
T Consensus 79 pPCQ~fS~ag~~-~~~d~r~~L~~~~~~~v~~~--~P~~~v~ENV~gl~s~~~~~~~~~i~-~l~~~GY~v~~~~vl~a~ 154 (376)
T 3g7u_A 79 PPCQGFSSIGKG-NPDDSRNQLYMHFYRLVSEL--QPLFFLAENVPGIMQEKYSGIRNKAF-NLVSGDYDILDPIKVKAS 154 (376)
T ss_dssp CCCCTTC--------CHHHHHHHHHHHHHHHHH--CCSEEEEEECTTTTCGGGHHHHHHHH-HHHHTTEEECCCEEEEGG
T ss_pred CCCCCcccccCC-CCCCchHHHHHHHHHHHHHh--CCCEEEEecchHhhccCcHHHHHHHH-HHHcCCCccCcEEEEEHh
Confidence 999999999987 78899999999999999999 99999999999999754 788999 999999999 99999999
Q ss_pred CcCCCccCcEEEEEEEeCCCcccccccccccccCCCCCCC---CCCccccccCCCCCCccc-c--------ccccCCchh
Q 016377 161 QFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLG---NDDMTVITKHDQPDDSWD-K--------LLESCDPVE 228 (390)
Q Consensus 161 ~~G~pq~R~R~~~i~~~~~~~~~~~~~~~~~~~~p~p~~~---~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~ 228 (390)
+||+||+|+|+|+||++++..++. + +|++. ....++.++++.++.... . ..+...+..
T Consensus 155 dyGvPQ~R~R~~iig~r~~~~~~~-------~---~p~~~~~~~~~~tv~dai~dlp~~~~~~~~~~~~~~~~~~~~~~~ 224 (376)
T 3g7u_A 155 DYGAPTIRTRYFFIGVKKSLKLDI-------S---DEVFMPKMIDPVTVKDALYGLPDIIDANWQSDSESWRTIKKDRKG 224 (376)
T ss_dssp GGTCSBCCEEEEEEEEEGGGCCCC-------C---GGGTSCCSCCCCCHHHHTTTCCSSCEEESSCSSCCCEECCCCCCS
T ss_pred hCCCCCCCcEEEEEEEeCCCCCCc-------c---ccccccccCCCCcHHHHHhcCCcccccccccccccccccCccCcc
Confidence 999999999999999999865431 1 22221 112333344433332110 0 000000001
Q ss_pred hhhhccCCCCcccccccccccCcccccccCCCcccchhcccccccccccchhHHhhhcccccccCCCCcccccccCCcEE
Q 016377 229 RFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYR 308 (390)
Q Consensus 229 d~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~p~~~~~~~~~~~y~r 308 (390)
+|........ ..|..+...+. . ..................+.+.... |... ..++..|+|
T Consensus 225 ~y~~~~r~~~---------~~~~~~~~~~~-~---~~~~~~~~h~~~~~~~~~~~r~~~~-----~~G~--~~~~~~~~R 284 (376)
T 3g7u_A 225 GFYEKLWGQI---------PRNVGDTESIA-K---LKNNIISGCTGTLHSKIVQERYASL-----SFGE--TDKISRSTR 284 (376)
T ss_dssp HHHHHHHCCC---------CTTCSCHHHHH-H---HHTTEESCCEEECCCHHHHHHHHTC-----CTTC--BCTTTCCBB
T ss_pred HHHHHhhcCc---------ccccccccccc-c---ccccccccccccccCHHHHHHHHhC-----CCCC--CccCCceee
Confidence 1111000000 00000000000 0 0000000000001111222222211 1111 125677999
Q ss_pred eecCCccceeecCCCCC----CCccccccCccccccHHHHHHhCCCCCCeecCCCCCHHHHHHHhCCccchHHHHHHHHH
Q 016377 309 YVKGTGSLLATVQPKNK----GKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQY 384 (390)
Q Consensus 309 ~~~~~~~~t~~~~~~~~----~~~~~ihp~~~R~LT~rE~aRLQgFPd~y~f~g~~s~~~~y~qiGNAVp~~v~~~I~~~ 384 (390)
+.|+++++|+++.+... ...+++||.++|.||+||+||||||||+|+|.| +.+++|+||||||||+++++||++
T Consensus 285 l~~d~ps~Ti~~~~~~~~g~~~~~r~~HP~~~R~lTvRE~ARlQsFPD~f~f~g--~~~~~~~qIGNAVPp~la~aia~~ 362 (376)
T 3g7u_A 285 LDPNGFCPTLRAGTARDKGSFQAVRPIHPYHPRVITPREAARLQGFPDWFRFHV--TKWHSFRQIGNSVSPIVAEYILKG 362 (376)
T ss_dssp CCTTSCBCCC-------------CCCBCSSSSSBCCHHHHHHHHTCCTTCCCCS--SHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred cCcccCCCceecCcCCCCCcccCccccCCccCcCCCHHHHHHhCCCCcceEECC--ChHHhheeeecCCCHHHHHHHHHH
Confidence 99999999999875432 245679999999999999999999999999999 899999999999999999999999
Q ss_pred HHhc
Q 016377 385 LFAQ 388 (390)
Q Consensus 385 l~~~ 388 (390)
|.++
T Consensus 363 I~~~ 366 (376)
T 3g7u_A 363 LYNL 366 (376)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9865
No 5
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=100.00 E-value=2.5e-69 Score=524.14 Aligned_cols=326 Identities=40% Similarity=0.693 Sum_probs=230.7
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCC-CeecCccccchhhhcccCccEEEeCCCCchh
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-PYQGNIQNLTAAELDMYGAHAWLLSPPCQPY 90 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~-~~~~di~~~~~~~~~~~~~D~l~~g~PCq~f 90 (390)
+++++|||||+||+++||+++|+++++|+++|+|+.|+++|++||++. ++.+||.++..++++..++|+|+||||||+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~f 81 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPF 81 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC----
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcch
Confidence 689999999999999999999965669999999999999999999985 5789999998877764359999999999999
Q ss_pred hhccCCCCCCChhhhhHHHHHHhcccccCC--CcEEEEeccccccChHHHHHHHHHHHhCCceeEEEEeCCCCcCCCccC
Q 016377 91 TRQGLQKQSSDARAFSFLKILELIPHTVKP--PHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSR 168 (390)
Q Consensus 91 S~~g~~~~~~d~r~~l~~~~~~~i~~~~~~--P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l~a~~~G~pq~R 168 (390)
|.+|++++.+|+|+.||++++++++++ + |++|+||||+|++++.+++.+++.|+++||.+.+.+|||++||+||+|
T Consensus 82 S~ag~~~g~~d~r~~l~~~~~~~i~~~--~~~P~~~~~ENV~~l~~~~~~~~i~~~l~~~GY~v~~~vl~a~~~GvPQ~R 159 (343)
T 1g55_A 82 TRIGRQGDMTDSRTNSFLHILDILPRL--QKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSR 159 (343)
T ss_dssp --------------CHHHHHHHHGGGC--SSCCSEEEEEEETTGGGSHHHHHHHHHHHHTTEEEEEEEECGGGGTCSCCC
T ss_pred hhcCCcCCccCccchHHHHHHHHHHHh--cCCCCEEEEeCCccccCHHHHHHHHHHHHHCCCeeEEEEEEHHHCCCCCcc
Confidence 999999999999999999999999998 8 999999999999998999999999999999999999999999999999
Q ss_pred cEEEEEEEeCCCcccccccccccccCCCCCCCCCCccccccCCCCCCccccccccCCchhhhhhccCCCCcccccccccc
Q 016377 169 PRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLS 248 (390)
Q Consensus 169 ~R~~~i~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~~~~~~~~~~~~~~ 248 (390)
+|+|+||++++..+ .+|.|++.....+.....+.++.. ......++.++++...
T Consensus 160 ~R~~iv~~~~~~~~----------~~p~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~------------- 213 (343)
T 1g55_A 160 LRYFLIAKLQSEPL----------PFQAPGQVLMEFPKIEIHRKNQQD---SDLSVKMLKDFLEDDT------------- 213 (343)
T ss_dssp CEEEEEEEESSSCC----------TTCCTTCEESSCCC---------------CCCCCGGGGCCTTC-------------
T ss_pred cEEEEEEEeCCCCC----------CCCCCcchhhhCCHhHhcCccCcc---cccccccHHHHhccCc-------------
Confidence 99999999988654 345444321111000000000000 0000012333332100
Q ss_pred cCcccccccCCCcccchhcccccccccccchhHHhhhcccccccCCCCcccccccCCcEEeecCCccceeecC-------
Q 016377 249 TGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ------- 321 (390)
Q Consensus 249 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~p~~~~~~~~~~~y~r~~~~~~~~t~~~~------- 321 (390)
....+.++...+.++..+.+...|......|++..|+.+..+.++...+..
T Consensus 214 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 271 (343)
T 1g55_A 214 ----------------------DVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENI 271 (343)
T ss_dssp ----------------------CHHHHBCCHHHHHHHGGGCCEECTTCSCCCCCCTTTTTCCTTSCCEEECCSSCCHHHH
T ss_pred ----------------------chhhccCCHHHHHHHHHHhCCCCccccccchhhccceeeecccccccccccccchhhc
Confidence 001244455566666666676666666666676666544444443221110
Q ss_pred ----CC--CCCCccccccCccccccHHHHHHhCCCCCCeecCCCCCHHHHHHHhCCccchHHHHHHHHHHHh
Q 016377 322 ----PK--NKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387 (390)
Q Consensus 322 ----~~--~~~~~~~ihp~~~R~LT~rE~aRLQgFPd~y~f~g~~s~~~~y~qiGNAVp~~v~~~I~~~l~~ 387 (390)
.+ .......+||.+.|.||+|||||||||||+|+|+|.+|.+++|+||||||||+|+++|++.|++
T Consensus 272 ~~~~~~~~~~~~~~~~h~~~~R~lT~RE~aRLqgFPd~f~f~g~~s~~~~ykqiGNAVpv~v~~~I~~~l~~ 343 (343)
T 1g55_A 272 YKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE 343 (343)
T ss_dssp HHTTTTCCHHHHHHHHHTTCEECCCHHHHHHHTTCCTTCCCCTTSCHHHHHHHHHHSCCHHHHHHHHHHHHC
T ss_pred cccccCCCCccceeccCCCCccccCHHHHHHHcCCChhhccCCCCCHHHHHHHhcCcccHHHHHHHHHHHhC
Confidence 00 0112345799999999999999999999999999878999999999999999999999999874
No 6
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=100.00 E-value=3.3e-68 Score=511.90 Aligned_cols=314 Identities=22% Similarity=0.354 Sum_probs=241.7
Q ss_pred ccccCCCCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEe
Q 016377 4 DMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 4 ~~~~~~~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
+|..+++++++++|||||+||+++||+++|++ +++++|+|+.|++||++||++.. .+||.++..+++++ +|+|+|
T Consensus 3 ~~~~~~~~~~~~~dLFaG~Gg~~~g~~~aG~~--~v~~~e~d~~a~~t~~~N~~~~~-~~Di~~~~~~~~~~--~D~l~~ 77 (327)
T 2c7p_A 3 EIKDKQLTGLRFIDLFAGLGGFRLALESCGAE--CVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNEKTIPD--HDILCA 77 (327)
T ss_dssp CCSSCTTTTCEEEEETCTTTHHHHHHHHTTCE--EEEEECCCHHHHHHHHHHHSCCC-BSCGGGSCGGGSCC--CSEEEE
T ss_pred cccccccCCCcEEEECCCcCHHHHHHHHCCCe--EEEEEeCCHHHHHHHHHHcCCCC-cCCHHHcCHhhCCC--CCEEEE
Confidence 45566677899999999999999999999976 99999999999999999999866 79999999888875 999999
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccCh---HHHHHHHHHHHhCCceeEEEEeCCC
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS---DTHAKMIEILANSDYLTQEFILSPL 160 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~---~~~~~~~~~l~~~GY~~~~~~l~a~ 160 (390)
|||||+||.+|++++.+|+|+.||++++++++++ +|++|+||||+|+++. ..++.+++.|+++||.+.+.+|||+
T Consensus 78 gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~--~P~~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~~vl~a~ 155 (327)
T 2c7p_A 78 GFPCQAFSISGKQKGFEDSRGTLFFDIARIVREK--KPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLNAL 155 (327)
T ss_dssp ECCCTTTCTTSCCCGGGSTTSCHHHHHHHHHHHH--CCSEEEEEEEGGGGTGGGGHHHHHHHHHHHHTTBCCEEEEEEGG
T ss_pred CCCCCCcchhcccCCCcchhhHHHHHHHHHHHhc--cCcEEEEeCcHHHHhccccHHHHHHHHHHHhCCCEEEEEEEEHH
Confidence 9999999999999999999999999999999999 9999999999999975 4899999999999999999999999
Q ss_pred CcCCCccCcEEEEEEEeCCCcccccccccccccCCCCCCCCCCccccccCCCCCCccccccccCCchhhhhhccCCCCcc
Q 016377 161 QFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQV 240 (390)
Q Consensus 161 ~~G~pq~R~R~~~i~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~~~~~~ 240 (390)
+||+||+|+|+|+||++++... ..+.+|.|++.. . +++|+++.......+
T Consensus 156 ~~GvPQ~R~R~~iv~~~~~~~~-------~~~~fP~~~~~~--~---------------------tl~d~l~~~~~~~~~ 205 (327)
T 2c7p_A 156 DYGIPQKRERIYMICFRNDLNI-------QNFQFPKPFELN--T---------------------FVKDLLLPDSEVEHL 205 (327)
T ss_dssp GGTCSBCCEEEEEEEEBGGGCC-------CCCCCCCCCCCC--C---------------------CGGGTCCCGGGTGGG
T ss_pred HcCCCccceEEEEEEEeCCCCc-------ccccCCCCcCCC--C---------------------cHHHHhcccCCcccc
Confidence 9999999999999999987521 125567766531 1 234444321100000
Q ss_pred cccccccccCcccccccCCCcccchhcccccccccccchhHHhhhcccccccCCCCcccccccCCcEEeecCCccceeec
Q 016377 241 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATV 320 (390)
Q Consensus 241 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~p~~~~~~~~~~~y~r~~~~~~~~t~~~ 320 (390)
.. . .....+ .+... ......... ..+. . .....|.++.++.+++|+++
T Consensus 206 ~~-~---~~~~~~--~l~~~--------~~~~~~~~~-----------~~~~-~------~~~~~~~~~~~~~~~~Ti~~ 253 (327)
T 2c7p_A 206 VI-D---RKDLVM--TNQEI--------EQTTPKTVR-----------LGIV-G------KGGQGERIYSTRGIAITLSA 253 (327)
T ss_dssp EE-C---CTTCEE--CSCCC--------SSCCSSCCE-----------EEES-T------TCCTTCEEEETTSCBCCCCS
T ss_pred cc-c---CCccee--Eeecc--------ccCccchhh-----------hhhc-c------CCccccccccCCCCcCceec
Confidence 00 0 000000 00000 000000000 0000 0 01123567778889999887
Q ss_pred CCC--CCCCccccccCccccccHHHHHHhCCCCCCeecCCCCCHHHHHHHhCCccchHHHHHHHHHHHhc
Q 016377 321 QPK--NKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388 (390)
Q Consensus 321 ~~~--~~~~~~~ihp~~~R~LT~rE~aRLQgFPd~y~f~g~~s~~~~y~qiGNAVp~~v~~~I~~~l~~~ 388 (390)
... ....+..+||.+.|.||+|||||||||||+|+|.+ +.+++|+||||||||+|+++|+++|.++
T Consensus 254 ~~~~~~~~~~~~~~~~~~R~LT~rE~aRLQgFPd~f~f~g--s~~~~ykqIGNAVp~~l~~~Ia~~i~~~ 321 (327)
T 2c7p_A 254 YGGGIFAKTGGYLVNGKTRKLHPRECARVMGYPDSYKVHP--STSQAYKQFGNSVVINVLQYIAYNIGSS 321 (327)
T ss_dssp SCCSTTTTTCEEEETTEEEECCHHHHHHHTTCCTTSCCCS--SHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_pred CCCCccCCCCccCCCCCCcCCCHHHHHHHCCCCcCcEeCC--CHHHHHhHccCCCCHHHHHHHHHHHHHH
Confidence 621 22334577899999999999999999999999998 9999999999999999999999999864
No 7
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=100.00 E-value=7.8e-66 Score=550.71 Aligned_cols=365 Identities=15% Similarity=0.144 Sum_probs=241.0
Q ss_pred CCCCCceEEeeecCchhHHHHHHhcC------CCccEEEEEcccHHHHHHHHHhcCCC-CeecCccccchhhhc------
Q 016377 8 NDGEAWRVLEFYSGIGGMRYSLMKAD------VSAQVVEAFDINDKANDVYELNFGHR-PYQGNIQNLTAAELD------ 74 (390)
Q Consensus 8 ~~~~~~~~~dlF~G~Gg~~~g~~~aG------~~~~~v~a~e~~~~a~~~~~~n~~~~-~~~~di~~~~~~~~~------ 74 (390)
++.+++++||||||+||+|+||++|| |+ +++|+|+|+.|++||++|||+. +++.||.++....+.
T Consensus 208 ~~~k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~--vv~AvE~d~~A~~Ty~~Nhp~~~~~~~di~~i~~~~~~~~~~~~ 285 (784)
T 4ft4_B 208 MPTRTATLLDLYSGCGGMSTGLCLGAALSGLKLE--TRWAVDFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCK 285 (784)
T ss_dssp --CEEEEEEEETCTTSHHHHHHHHHHHHHTEEEE--EEEEEESCHHHHHHHHHHCTTSEEEESCHHHHHHHHHHHHHHHH
T ss_pred cCCCCCeEEEeCcCccHHHHHHHHhCcccCCcee--EEEEEeCCHHHHHHHHHHCCCCceecCcHHHhhhhhhhcccccc
Confidence 45677999999999999999999998 66 9999999999999999999985 567888765321110
Q ss_pred --------------------------------------------------------------------------------
Q 016377 75 -------------------------------------------------------------------------------- 74 (390)
Q Consensus 75 -------------------------------------------------------------------------------- 74 (390)
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~i~~~~ 365 (784)
T 4ft4_B 286 KYVQDVDSNLASSEDQADEDSPLDKDEFVVEKLVGICYGGSDRENGIYFKVQWEGYGPEEDTWEPIDNLSDCPQKIREFV 365 (784)
T ss_dssp HTC-----------------------CCCEEEEEEEEESCSSSCSSEEEEEEETTCCTTSCEEEESGGGTTCHHHHHHHH
T ss_pred cccccccccccccccccccccccccccchhhhhcccccccccccccccchhhhcccccccccccccccccccchhccccc
Confidence
Q ss_pred -----------ccCccEEEeCCCCchhhhccCCCC----CCChhhhhHHHHHHhcccccCCCcEEEEeccccccChH---
Q 016377 75 -----------MYGAHAWLLSPPCQPYTRQGLQKQ----SSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD--- 136 (390)
Q Consensus 75 -----------~~~~D~l~~g~PCq~fS~~g~~~~----~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~--- 136 (390)
.+++|||+||||||+||.+|++++ .+|+|+.||++++|+|+.+ +|++||||||+||++..
T Consensus 366 ~~~~~~~~~~~~G~VDvl~GGpPCQ~FS~aG~~kg~~~~~~D~R~~L~~~~~riv~~~--rPk~fvlENV~glls~~~g~ 443 (784)
T 4ft4_B 366 QEGHKRKILPLPGDVDVICGGPPCQGISGFNRYRNRDEPLKDEKNKQMVTFMDIVAYL--KPKYVLMENVVDILKFADGY 443 (784)
T ss_dssp HHHHHHTSSCCTTSCSEEEECCCCCSSSGGGGGSCTTSTTTSTTCHHHHHHHHHHHHH--CCSEEEEEEEGGGGTGGGGH
T ss_pred cccchhhccCCCCCeEEEEecCCCcchhhhhcccCcCccccCchhHHHHHHHHHHHHH--CCCEEEEEecCCccccccch
Confidence 015899999999999999998776 5689999999999999999 99999999999998754
Q ss_pred HHHHHHHHHHhCCceeEEEEeCCCCcCCCccCcEEEEEEEeCCCcccccccccccccCCCCCCCCCCcccc-ccCC----
Q 016377 137 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVI-TKHD---- 211 (390)
Q Consensus 137 ~~~~~~~~l~~~GY~~~~~~l~a~~~G~pq~R~R~~~i~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~-~~~~---- 211 (390)
.|+.+++.|.++||++.|.+|||++||+||+|+|+|+||+|++... ..+|.|+|........ ....
T Consensus 444 ~~~~il~~l~~lGY~v~~~vLnA~dyGVPQ~R~Rvfivg~r~d~~~---------~~~P~pth~~~~~~~~~~~~~~~~~ 514 (784)
T 4ft4_B 444 LGKYALSCLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVL---------PKYPLPTYDVVVRGGAPNAFSQCMV 514 (784)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEGGGGTCSSCCEEEEEEEECTTSCC---------CCEECCSBCCCCCSCSCGGGTTCBC
T ss_pred HHHHHHHHHHhCCCeeeeeecCHHHcCCCcccccceeeeeccCCCc---------ccCCCcccccccccccccccccccc
Confidence 8999999999999999999999999999999999999999998643 2345555532111000 0000
Q ss_pred CCCCccccccccCCchhhhhhccCCCCccc--ccccc-----------cccCcccccc-cCCCcccchhccccccccccc
Q 016377 212 QPDDSWDKLLESCDPVERFLEFSNSGDQVN--TETGF-----------LSTGTAAVDD-FGAAEETVEVDRCVSIDHFLV 277 (390)
Q Consensus 212 ~~~~~~~~~~~~~~~~~d~l~~~~~~~~~~--~~~~~-----------~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 277 (390)
..............++.+.+.......... ....+ .......... .....................
T Consensus 515 ~~~~~~~~~~~~~~t~~dai~dlp~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~ 594 (784)
T 4ft4_B 515 AYDETQKPSLKKALLLGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKDMLDWSFGEGAGPDEGKLLDHQPLRL 594 (784)
T ss_dssp SCCTTCCCCCBCCCCHHHHHTTSCCCCSCCCCSEECCSSCCCSHHHHHHTCCTTTTTCCTTCSSCCSSTTCEECCCCCCC
T ss_pred cccccccccccccccHHHHhhcccccccCCCccccccCCCCccHHHHHHhhccccccccccccccccccccccccccccc
Confidence 000000000011112333332211100000 00000 0000000000 000000000000000000000
Q ss_pred chhHHh--------hhccccccc--------------------CCC----------CcccccccCCcEEeecCCccceee
Q 016377 278 PLSLIE--------RWGSAMDIV--------------------YPD----------SKRCCCFTKSYYRYVKGTGSLLAT 319 (390)
Q Consensus 278 ~~~~~~--------~~g~~~d~~--------------------~p~----------~~~~~~~~~~y~r~~~~~~~~t~~ 319 (390)
...... .++...++. ... ......+...|+|+.++.+++|++
T Consensus 595 ~~~~~~r~~~i~~~~g~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~rl~~d~ps~TIt 674 (784)
T 4ft4_B 595 NNDDYERVQQIPVKKGANFRDLKGVRVGANNIVEWDPEIERVKLSSGKPLVPDYAMSFIKGKSLKPFGRLWWDETVPTVV 674 (784)
T ss_dssp CHHHHHHHHHSCSSTTCCGGGSTTEEECGGGCEEECTTSCCCBCTTSSBSSCHHHHHGGGGTCCCTTEECCTTCCCSCCC
T ss_pred CHHHHHHHHhcccccCCcccccccccccccccccccchhhhcccccCcccccccccccccCCcCccceeccCCCccccee
Confidence 000000 000001100 000 001223456789999999999999
Q ss_pred cCCCCCCCccccccCccccccHHHHHHhCCCCCCeecCCCCCHHHHHHHhCCccchHHHHHHHHHHHhc
Q 016377 320 VQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388 (390)
Q Consensus 320 ~~~~~~~~~~~ihp~~~R~LT~rE~aRLQgFPd~y~f~g~~s~~~~y~qiGNAVp~~v~~~I~~~l~~~ 388 (390)
+++. ..++.++||.+.|+||||||||||||||+|+|.| +.+++|+||||||||+|+++||++|.++
T Consensus 675 t~~~-~~~~~~iHp~~~R~LTpRE~ARLQgFPD~y~f~G--s~~~~ykQIGNAVpp~lA~aIg~~I~~a 740 (784)
T 4ft4_B 675 TRAE-PHNQVIIHPTQARVLTIRENARLQGFPDYYRLFG--PIKEKYIQVGNAVAVPVARALGYCLGQA 740 (784)
T ss_dssp SCCC-SSSSEEECSSSSSBCCHHHHHHHTTCCTTCCCCS--CHHHHHHHHHHSCCHHHHHHHHHHHHHH
T ss_pred cccc-CCCCeecCCCCCcCCcHHHHHHHCCCCCCCEeCC--CHHHHHhhccCCCCHHHHHHHHHHHHHH
Confidence 9854 4567899999999999999999999999999999 8999999999999999999999999765
No 8
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=100.00 E-value=4.3e-64 Score=536.77 Aligned_cols=363 Identities=17% Similarity=0.160 Sum_probs=247.0
Q ss_pred ccccCCCCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCC-CeecCccccc------------h
Q 016377 4 DMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-PYQGNIQNLT------------A 70 (390)
Q Consensus 4 ~~~~~~~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~-~~~~di~~~~------------~ 70 (390)
.....+..+++++|||||+||+++||++||| .++++|+|+|+.|++||++|||+. ++.+||.++. .
T Consensus 532 ~~~~~~~~~l~~iDLFaG~GGlslGl~~AG~-~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~~~~~ 610 (1002)
T 3swr_A 532 PEIEIKLPKLRTLDVFSGCGGLSEGFHQAGI-SDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRG 610 (1002)
T ss_dssp CCCCCCCCCEEEEEESCTTSHHHHHHHHHTS-EEEEEEECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSBCTTC
T ss_pred ccccccCCCCeEEEeccCccHHHHHHHHCCC-CceEEEEECCHHHHHHHHHhCCCCccccccHHHHhhhccchhhhhhhh
Confidence 3456678899999999999999999999997 249999999999999999999985 4667876652 1
Q ss_pred hhhc-ccCccEEEeCCCCchhhhccCCC--CCCChhhhhHHHHHHhcccccCCCcEEEEeccccccCh---HHHHHHHHH
Q 016377 71 AELD-MYGAHAWLLSPPCQPYTRQGLQK--QSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS---DTHAKMIEI 144 (390)
Q Consensus 71 ~~~~-~~~~D~l~~g~PCq~fS~~g~~~--~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~---~~~~~~~~~ 144 (390)
..++ ..++|+|+||||||+||.+|+.+ +.+|.|+.||++++++|+.+ +|++|+||||+|+++. ..++.+++.
T Consensus 611 ~~lp~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~--rPk~~llENV~glls~~~~~~~~~i~~~ 688 (1002)
T 3swr_A 611 QRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY--RPRFFLLENVRNFVSFKRSMVLKLTLRC 688 (1002)
T ss_dssp CBCCCTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHH--CCSEEEEEEEGGGGTTGGGHHHHHHHHH
T ss_pred hhcccCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHh--CCCEEEEeccHHHhccCcchHHHHHHHH
Confidence 2232 12699999999999999999753 24578999999999999999 9999999999999875 379999999
Q ss_pred HHhCCceeEEEEeCCCCcCCCccCcEEEEEEEeCCCcccccccccccccCCCCCCCCCCccc-c-ccCC---CC-CCccc
Q 016377 145 LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTV-I-TKHD---QP-DDSWD 218 (390)
Q Consensus 145 l~~~GY~~~~~~l~a~~~G~pq~R~R~~~i~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~-~-~~~~---~~-~~~~~ 218 (390)
|+++||++.+.+|||++||+||+|+|+|+||++.+..+ ..+|.|+|....... + ...+ .. ...|.
T Consensus 689 L~~lGY~v~~~vLnA~dyGvPQ~R~R~fiva~r~g~~~---------p~~P~pth~~~~~~~~l~~~~~~~~~~~~~~~~ 759 (1002)
T 3swr_A 689 LVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL---------PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRL 759 (1002)
T ss_dssp HHHHTCEEEEEEEEGGGGTCSBCCEEEEEEEECTTSCC---------CCCCCCCBCCCGGGCCCCEEETTEEECCSCCCS
T ss_pred HHhcCCeEEEEEEEHHHCCCCccceEEEEEEEeCCCCC---------CCCCCcccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999998643 235777764321100 0 0000 00 00000
Q ss_pred c-ccccCCchhhhhhccCCCCc--ccccccc-----------cccCc--ccccccCCCcccc-hhcccccccccccchhH
Q 016377 219 K-LLESCDPVERFLEFSNSGDQ--VNTETGF-----------LSTGT--AAVDDFGAAEETV-EVDRCVSIDHFLVPLSL 281 (390)
Q Consensus 219 ~-~~~~~~~~~d~l~~~~~~~~--~~~~~~~-----------~~~g~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 281 (390)
. ......++.|.+...+.... ......+ ++.+. ....+|....++. .+.+.. .+|.
T Consensus 760 ~~~p~~~vTV~DAIsDLP~i~~g~~~~~~~y~~~p~s~yq~~mR~~~~~~~l~~H~~~~~s~~~~~Ri~-----~IP~-- 832 (1002)
T 3swr_A 760 SSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMR-----HIPL-- 832 (1002)
T ss_dssp SCCSBCCCCHHHHHTTSCCCCTTCCCSEECCCSCCCSHHHHHHHTTCSSCCEECCCCCCCCHHHHHHHH-----TSCC--
T ss_pred ccCCcCCcCHHHHhhhCCccccCccccccccCCCCccHHHHHhhcccccccccCcccccCCHHHHHHHh-----cCCC--
Confidence 0 00112345555543222100 0000000 00000 0001111111110 000000 0000
Q ss_pred HhhhcccccccC---------------------------------------------CC---------------Cccccc
Q 016377 282 IERWGSAMDIVY---------------------------------------------PD---------------SKRCCC 301 (390)
Q Consensus 282 ~~~~g~~~d~~~---------------------------------------------p~---------------~~~~~~ 301 (390)
..++.+.|+.. |. ..+.+.
T Consensus 833 -~~Gg~wrdlP~~~~~l~~~~~~~~l~~~~~~~~~g~~~~~~l~~~c~~~~~Gk~~~p~~~~~~~l~p~~~~~~~~r~~~ 911 (1002)
T 3swr_A 833 -APGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHTGNRHNH 911 (1002)
T ss_dssp -STTCCGGGCCCCCEECTTSCEEBCCCCCBCCTTTCCCTTCCCCBCSGGGSSSCCCCGGGCCCSBSSCTHHHHHGGGTGG
T ss_pred -CCCCChhhCchhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 01111111110 00 011234
Q ss_pred ccCCcEEeecCCccceeecCCC-CCCCccccccCccccccHHHHHHhCCCCCCeecCCCCCHHHHHHHhCCccchHHHHH
Q 016377 302 FTKSYYRYVKGTGSLLATVQPK-NKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAP 380 (390)
Q Consensus 302 ~~~~y~r~~~~~~~~t~~~~~~-~~~~~~~ihp~~~R~LT~rE~aRLQgFPd~y~f~g~~s~~~~y~qiGNAVp~~v~~~ 380 (390)
++..|+|+.|+.++.|+++.+. ....++++||.++|.||+||+||||||||+|.|.| +.+++|+||||||||+++++
T Consensus 912 ~~~~ygRL~wd~p~~~~it~~~~~~~~g~~~Hp~~~R~lt~rE~arlQ~fPd~~~f~g--~~~~~~~qiGNaVp~~~~~~ 989 (1002)
T 3swr_A 912 WAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFG--NILDKHRQVGNAVPPPLAKA 989 (1002)
T ss_dssp GTTTTCBCCTTSCBSSCCSSCCTTCTTCCCBCSSSSSBCCHHHHHHHTTCCTTCCCCS--SHHHHHHHHHHSCCHHHHHH
T ss_pred cCccceeeccCCCCCeeEecCCCCCCCCcccCcccccCCCHHHHHHhCCCCcceEEcC--ChHHHheeeeccCCHHHHHH
Confidence 5778999999999444444432 34578899999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHhc
Q 016377 381 LLQYLFAQ 388 (390)
Q Consensus 381 I~~~l~~~ 388 (390)
||.+|.++
T Consensus 990 i~~~i~~~ 997 (1002)
T 3swr_A 990 IGLEIKLC 997 (1002)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999765
No 9
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=100.00 E-value=4.5e-63 Score=486.32 Aligned_cols=318 Identities=19% Similarity=0.223 Sum_probs=230.9
Q ss_pred cCCCCCceEEeeecCchhHHHHHHhcCCCccE----EEEEcccHHHHHHHHHhcCCCC----------------------
Q 016377 7 KNDGEAWRVLEFYSGIGGMRYSLMKADVSAQV----VEAFDINDKANDVYELNFGHRP---------------------- 60 (390)
Q Consensus 7 ~~~~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~----v~a~e~~~~a~~~~~~n~~~~~---------------------- 60 (390)
++++.+++|+|||||+||+++||+++|+++++ |+|+|+|+.|+++|++||+...
T Consensus 5 ~~~~~~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~~~~~~~~~~~~~l~~~s~d~k~~~ 84 (403)
T 4dkj_A 5 KDKIKVIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSKNFNPKIERLDRDILSISNDSKMPI 84 (403)
T ss_dssp -CCCEEEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCSSCCCCCBCCCTTCCCCBSSSSSCC
T ss_pred ccccccceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCCCcccchhhhhhhhhhccccccccc
Confidence 45667799999999999999999999954336 9999999999999999998742
Q ss_pred -------------------------eecCccccchhhhcccCccEEEeCCCCchhhhccCCCCCCC---hhhhhHHHHHH
Q 016377 61 -------------------------YQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSD---ARAFSFLKILE 112 (390)
Q Consensus 61 -------------------------~~~di~~~~~~~~~~~~~D~l~~g~PCq~fS~~g~~~~~~d---~r~~l~~~~~~ 112 (390)
..+||++++..++++ .+|+|+||||||+||.+|++++.+| +|+.||++++|
T Consensus 85 ~~~~i~~l~~~~l~~i~~~~~~~~~~~~DI~~i~~~~ip~-~vDll~ggpPCQ~fS~ag~~~g~~d~~~~r~~L~~~~~r 163 (403)
T 4dkj_A 85 SEYGIKKINNTIKASYLNYAKKHFNNLFDIKKVNKDNFPK-NIDIFTYSFPCQDLSVQGLQKGIDKELNTRSGLLWEIER 163 (403)
T ss_dssp CHHHHHHHTTBHHHHHHHHHHHHSCBCCCGGGCCTTTSCS-SCSEEEECCCCTTTCTTSCCCCCCGGGCCSGGGHHHHHH
T ss_pred cccccccccHHHHHHHHhhcccCCCcccchhhcCHhhCCC-CCcEEEEeCCCCCHHHhCCCCCCCccccccchhHHHHHH
Confidence 248999999988886 5899999999999999999999887 89999999999
Q ss_pred hccc--------ccCCCcEEEEeccccccChH---HHHHHHHHHHhCCceeEEEEeCCCCcCCCccCcEEEEEEEeCCCc
Q 016377 113 LIPH--------TVKPPHMLFVENVVGFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 181 (390)
Q Consensus 113 ~i~~--------~~~~P~~~~~ENV~~~~~~~---~~~~~~~~l~~~GY~~~~~~l~a~~~G~pq~R~R~~~i~~~~~~~ 181 (390)
++++ + +|++|+||||+|+++.+ .++.+++.|+++||.+.+.+|||++||+||+|+|+|+||++++
T Consensus 164 ii~~~~~k~~~~~--~Pk~~l~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~~vl~a~~~GvPQ~R~R~fiva~r~~-- 239 (403)
T 4dkj_A 164 ILEEIKNSFSKEE--MPKYLLMENVKNLLSHKNKKNYNTWLKQLEKFGYKSKTYLLNSKNFDNCQNRERVFCLSIRDD-- 239 (403)
T ss_dssp HHHHHHHHSCGGG--SCSEEEEEEEGGGGSHHHHHHHHHHHHHHHHTTEEEEEEEEEGGGTTCSBCCEEEEEEEEEHH--
T ss_pred HHHHhhhhhcccc--CCCEEEEecchhhhhhccchHHHHHHHHHHhCCCeEEEEEecHHHcCCCccceEEEEEEEcCC--
Confidence 9998 7 89999999999999864 7899999999999999999999999999999999999999987
Q ss_pred ccccccccccccCCCCCCCCCCccccccCCCCCCccccccccCCchhhhhhccCCCCcccccccccccCcccccccCCCc
Q 016377 182 FRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE 261 (390)
Q Consensus 182 ~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 261 (390)
|. +|+|++.... +. ......+++|+|+...+ ..+. ..... .+
T Consensus 240 f~----------fP~~~~~~~~-~~-------------~~~~~~~l~dile~~~~-~~y~------~~~~~---~~---- 281 (403)
T 4dkj_A 240 YL----------EKTGFKFKEL-EK-------------VKNPPKKIKDILVDSSN-YKYL------NLNKY---ET---- 281 (403)
T ss_dssp HH----------HHHCCCCCCG-GG-------------CCCCCCCGGGGCCCCSC-CCCC------CCTTS---CC----
T ss_pred CC----------CCCccccccc-cc-------------cccccccHHHHhccccc-cccc------hhhhh---cc----
Confidence 33 3445543110 00 00112357888874321 0110 00000 00
Q ss_pred ccchhcccccccccccchh-HHhhhcccccccCCCCcccccccCCcEEeecCCccceeecCCCCCCCccccccCcccccc
Q 016377 262 ETVEVDRCVSIDHFLVPLS-LIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFT 340 (390)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~-~~~~~g~~~d~~~p~~~~~~~~~~~y~r~~~~~~~~t~~~~~~~~~~~~~ihp~~~R~LT 340 (390)
..+..... .....+...+ .+......+.....++|++++.. .......++.+.|.||
T Consensus 282 -----------~~~~~~~~~~~~~~~~~~~----------~~~~~~~v~~~~~~~~Tlt~~~~-~~~~~~~~~~~~R~lt 339 (403)
T 4dkj_A 282 -----------TTFRETKSNIISRPLKNYT----------TFNSENYVYNINGIGPTLTASGA-NSRIKIETQQGVRYLT 339 (403)
T ss_dssp -----------CCCEECTTSBEEEECTTSC----------SCGGGSEEEETTSBBCCCCSSSG-GGSCEEEETTEEEECC
T ss_pred -----------ccccccccchhcccccccc----------ccccCcceecCCCcccceecCCC-CceeEEccCCCcccCC
Confidence 00000000 0000000000 01111122333335666666421 1112234678899999
Q ss_pred HHHHHHhCCCCC-CeecCC---CCCHHHHHHHhCCccchHHHHHHHHHHHhcc
Q 016377 341 PREVANLHSFPG-DFQFPH---HLSLRQRYALLGNSLSIAVVAPLLQYLFAQA 389 (390)
Q Consensus 341 ~rE~aRLQgFPd-~y~f~g---~~s~~~~y~qiGNAVp~~v~~~I~~~l~~~~ 389 (390)
||||+||||||| +|.+.. .+|.+++|+|+||||||+|+++|++.|.++.
T Consensus 340 prE~~rlqGFpd~~~~~~~~~~~~s~~~~y~~~GNsv~v~v~~~i~~~i~~~l 392 (403)
T 4dkj_A 340 PLECFKYMQFDVNDFKKVQSTNLISENKMIYIAGNSIPVKILEAIFNTLEFVN 392 (403)
T ss_dssp HHHHHHHTTCCHHHHHHHHHTSCSCHHHHHHHHHTSCCHHHHHHHHHTCCCCC
T ss_pred HHHHHHHcCCCHHHhhhhhccCCCCHHHHHhhcCCccCHHHHHHHHHHHHHHH
Confidence 999999999999 798862 2599999999999999999999999987653
No 10
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=100.00 E-value=4.1e-62 Score=532.17 Aligned_cols=365 Identities=17% Similarity=0.175 Sum_probs=238.6
Q ss_pred CCCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCC-CeecCccccc------------hhhhcc
Q 016377 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-PYQGNIQNLT------------AAELDM 75 (390)
Q Consensus 9 ~~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~-~~~~di~~~~------------~~~~~~ 75 (390)
+..+++++|||||+||+++||++||+ +++++|+|+|+.|++||++|||+. ++.+||.++. ...++.
T Consensus 848 ~~~~l~viDLFsG~GGlslGfe~AG~-~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp~ 926 (1330)
T 3av4_A 848 KLPKLRTLDVFSGCGGLSEGFHQAGI-SETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQ 926 (1330)
T ss_dssp CCCCEEEEEETCTTSHHHHHHHHTTS-EEEEEEECCSHHHHHHHHHHCTTSEEECSCHHHHHHHHTTTCSBCSSCCBCCC
T ss_pred ccCCceEEecccCccHHHHHHHHCCC-CceEEEEECCHHHHHHHHHhCCCCcEeeccHHHHhHhhhccchhhhhhhhccc
Confidence 56789999999999999999999997 249999999999999999999984 5667776553 222331
Q ss_pred -cCccEEEeCCCCchhhhccCCC--CCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChH---HHHHHHHHHHhCC
Q 016377 76 -YGAHAWLLSPPCQPYTRQGLQK--QSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMIEILANSD 149 (390)
Q Consensus 76 -~~~D~l~~g~PCq~fS~~g~~~--~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~---~~~~~~~~l~~~G 149 (390)
.++|+|+||||||+||.+|+++ +.+|.|+.||++++++|+.+ +|++||||||+|+++.. +++.++..|+++|
T Consensus 927 ~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~~~~lriv~~~--rPk~fv~ENV~glls~~~g~~~~~il~~L~~lG 1004 (1330)
T 3av4_A 927 KGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY--RPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMG 1004 (1330)
T ss_dssp TTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSHHHHHHHHHHHH--CCSEEEEEEEGGGGTTTTTHHHHHHHHHHHHHT
T ss_pred cCccceEEecCCCcccccccccccccccchhhHHHHHHHHHHHHh--cCcEEEEeccHHHhccCccHHHHHHHHHHHhcC
Confidence 2599999999999999999753 34678999999999999999 99999999999998753 7999999999999
Q ss_pred ceeEEEEeCCCCcCCCccCcEEEEEEEeCCCcccccccccccccCCCCCCCCCCc----ccc---ccCCCCCCccccc-c
Q 016377 150 YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDM----TVI---TKHDQPDDSWDKL-L 221 (390)
Q Consensus 150 Y~~~~~~l~a~~~G~pq~R~R~~~i~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~----~~~---~~~~~~~~~~~~~-~ 221 (390)
|++.+.+|||++||+||+|+|+|+||++.+..+ ..+|.|+|..... ... ..+.. ...|... .
T Consensus 1005 Y~v~~~vLnA~dyGVPQ~R~Rvfivg~r~~~~~---------~~fP~pth~~~~~~~~l~~~~~~~~~~~-~i~~~~~~p 1074 (1330)
T 3av4_A 1005 YQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL---------PLFPEPLHVFAPRACQLSVVVDDKKFVS-NITRLSSGP 1074 (1330)
T ss_dssp CEEEEEEEEGGGGSCSBCCEEEEEEEECTTSCC---------CCCCCCCBCCCGGGCCCCEEETTEEECC-SCCCSSCCS
T ss_pred CeeeEEEecHHHcCCCccccEEEEEEecCCCcc---------cCCCCccccccccccccccccccccccc-cccccccCC
Confidence 999999999999999999999999999987533 2357776632110 000 00000 0000000 0
Q ss_pred ccCCchhhhhhccCCCCc-cc-ccccc-----------cccCc--ccccccCCCcccch-hc--------cccccc----
Q 016377 222 ESCDPVERFLEFSNSGDQ-VN-TETGF-----------LSTGT--AAVDDFGAAEETVE-VD--------RCVSID---- 273 (390)
Q Consensus 222 ~~~~~~~d~l~~~~~~~~-~~-~~~~~-----------~~~g~--~~~~~~~~~~~~~~-~~--------~~~~~~---- 273 (390)
....++.|.+...+.... .. ....+ ++... ....+|....++.. .. .+..+.
T Consensus 1075 ~~~vTV~DAI~DLP~i~~g~~~~~~~y~~~p~s~~q~~iR~~~~~~~l~~H~~~~~s~~~~~Ri~~ip~~~G~~~~dlp~ 1154 (1330)
T 3av4_A 1075 FRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPN 1154 (1330)
T ss_dssp BCCCCHHHHHTTSCCCCTTCCCSEEECCSCCCSHHHHHHHCSSCCCEEECCCCCCCCHHHHHHHHHSCSSTTCCGGGCCC
T ss_pred cCCCcHHHHhhcCcccccCCcccccccCCCcccHHHHHhhccccccccccccccccCHHHHHHHHhccCCCCCCcccchh
Confidence 111245555543221000 00 00000 00000 00000100000000 00 000000
Q ss_pred --------------ccccchh--------HHhh-----hccccc-------ccCCC-----CcccccccCCcEEeecCCc
Q 016377 274 --------------HFLVPLS--------LIER-----WGSAMD-------IVYPD-----SKRCCCFTKSYYRYVKGTG 314 (390)
Q Consensus 274 --------------~~~~~~~--------~~~~-----~g~~~d-------~~~p~-----~~~~~~~~~~y~r~~~~~~ 314 (390)
+|..+.. .+.. .|...+ -+.|. ..+...++..|+|+.|+.+
T Consensus 1155 ~~~~l~~g~~~~~l~y~~~~~k~g~~~~~~lrg~~~~~~Gk~~~p~~r~~~tL~p~~~~~~g~~~~~~~~~ygRL~~d~p 1234 (1330)
T 3av4_A 1155 IQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGF 1234 (1330)
T ss_dssp CCEECSSSCEEBCCCCCBCCTTTCCCTTSCCCBSSGGGGTSCCCSSSCCCSBSSCTHHHHHGGGTGGGTTTTCBCCTTSC
T ss_pred hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccCCC
Confidence 0000000 0000 000000 00000 0011234667999999987
Q ss_pred cceeecCCC-CCCCccccccCccccccHHHHHHhCCCCCCeecCCCCCHHHHHHHhCCccchHHHHHHHHHHHhc
Q 016377 315 SLLATVQPK-NKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388 (390)
Q Consensus 315 ~~t~~~~~~-~~~~~~~ihp~~~R~LT~rE~aRLQgFPd~y~f~g~~s~~~~y~qiGNAVp~~v~~~I~~~l~~~ 388 (390)
+.|+++.+. ....++++||.++|.||+|||||||||||+|.|.| +.+++|+||||||||+||++||.+|.++
T Consensus 1235 ~sttiT~~~~~~k~g~~iHP~q~R~LTVREaARLQsFPDdF~F~G--s~t~~yrQIGNAVPPlLAkAIA~~I~~~ 1307 (1330)
T 3av4_A 1235 FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFG--NILDRHRQVGNAVPPPLAKAIGLEIKLC 1307 (1330)
T ss_dssp BSSCCSSCCTTSSSCCCBCSSSSSBCCHHHHHHHTTCCTTCCCCS--SHHHHHHHHHHSCCHHHHHHHHHHHHHH
T ss_pred CCceEeCCcccCCCCcccCccccccCCHHHHHHhcCCCCCeEECC--CHhhhhEEeEeCcCHHHHHHHHHHHHHH
Confidence 665555443 22346789999999999999999999999999999 8899999999999999999999999764
No 11
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=100.00 E-value=9.4e-60 Score=445.71 Aligned_cols=274 Identities=19% Similarity=0.261 Sum_probs=205.6
Q ss_pred ccccCCCCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCC-CeecCccccchhhhcc-cCccEE
Q 016377 4 DMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-PYQGNIQNLTAAELDM-YGAHAW 81 (390)
Q Consensus 4 ~~~~~~~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~-~~~~di~~~~~~~~~~-~~~D~l 81 (390)
.|+++...+++++|||||+||+++||+++|++.++|+++|+|+.|++||+.|||+. ++.+||++++.+++++ .++|+|
T Consensus 8 ~~~~~~~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll 87 (295)
T 2qrv_A 8 HMPAEKRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLV 87 (295)
T ss_dssp --CCCCCCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEE
T ss_pred cCccccCCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEE
Confidence 58999999999999999999999999999988444899999999999999999985 6889999999888764 259999
Q ss_pred EeCCCCchhhhcc-CCCCCCChhhhhHHHHHHhcccccCCCc-------EEEEeccccccChHHHHHHHHHHHhCCceeE
Q 016377 82 LLSPPCQPYTRQG-LQKQSSDARAFSFLKILELIPHTVKPPH-------MLFVENVVGFETSDTHAKMIEILANSDYLTQ 153 (390)
Q Consensus 82 ~~g~PCq~fS~~g-~~~~~~d~r~~l~~~~~~~i~~~~~~P~-------~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~ 153 (390)
+||||||+||.+| ++++.+|+|+.||++++|+++++ +|+ +|+||||+|+++.. ...+.+.|+. .
T Consensus 88 ~ggpPCQ~fS~ag~~r~g~~d~r~~L~~~~~rii~~~--~P~~~~~~P~~~l~ENV~gl~~~~-~~~~~~~l~~-----~ 159 (295)
T 2qrv_A 88 IGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDA--RPKEGDDRPFFWLFENVVAMGVSD-KRDISRFLES-----N 159 (295)
T ss_dssp EECCCCGGGBTTCTTCCTTTSTTTTHHHHHHHHHHHH--SCCTTCCCCCEEEEEEESSBCHHH-HHHHHHHHTS-----C
T ss_pred EecCCCccccccCccccccccccchhHHHHHHHHHHh--CcccccCCccEEEEEcCcchhhcC-ccHHHHHHhc-----C
Confidence 9999999999999 77889999999999999999999 788 99999999998764 3345555553 4
Q ss_pred EEEeCCCCcCCCccCcEEEEEEEeCCCcccccccccccccCCCCCCCCCCccccccCCCCCCccccccccCCchhhhhhc
Q 016377 154 EFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEF 233 (390)
Q Consensus 154 ~~~l~a~~~G~pq~R~R~~~i~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ 233 (390)
+.+|||.+|| ||+|+|+|+ +.+++. .+|.+...++ ..++.|+++.
T Consensus 160 ~~vl~a~~~~-PQ~R~R~~i-~~~~~~------------~~p~~~~~~~---------------------~~tv~d~l~~ 204 (295)
T 2qrv_A 160 PVMIDAKEVS-AAHRARYFW-GNLPGM------------NRPLASTVND---------------------KLELQECLEH 204 (295)
T ss_dssp CCCEEGGGTS-SBCCEEEEE-ECCTTS------------SSCCCCCSSC---------------------CCSGGGTSCT
T ss_pred cEEeecceEC-CccCcEEEE-EEecCc------------cCCCcccccC---------------------cccHHHHhcC
Confidence 6889999996 999999998 665432 1222111000 0123444431
Q ss_pred cCCCCcccccccccccCcccccccCCCcccchhcccccccccccchhHHhhhcccccccCCCCcccccccCCcEEeecCC
Q 016377 234 SNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGT 313 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~p~~~~~~~~~~~y~r~~~~~ 313 (390)
.. . . .+ +... +++..+..+..+.
T Consensus 205 ~~----~------------~--------------------~~----------~~~~-----------~i~~~~~~~~~g~ 227 (295)
T 2qrv_A 205 GR----I------------A--------------------KF----------SKVR-----------TITTRSNSIKQGK 227 (295)
T ss_dssp TC----E------------E--------------------SS----------SSBC------------------------
T ss_pred Cc----c------------c--------------------cc----------Cccc-----------cccCCCceecCCC
Confidence 00 0 0 00 0000 0000000000010
Q ss_pred ccceeecCCCCCCCccccccCccccccHHHHHHhCCCCCCeecCCCCCHHHHHHHhCCccchHHHHHHHHHHHhc
Q 016377 314 GSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 388 (390)
Q Consensus 314 ~~~t~~~~~~~~~~~~~ihp~~~R~LT~rE~aRLQgFPd~y~f~g~~s~~~~y~qiGNAVp~~v~~~I~~~l~~~ 388 (390)
+ .....+|+.+.|.||+||+||||||||+|+|++++|.+++|+||||||||+|+++|+++|.+.
T Consensus 228 ~-----------~~~~~~~~~~~R~lt~rE~arlqgFPd~~~~~~~~s~~~~~~qiGNaVpv~~~~~i~~~i~~~ 291 (295)
T 2qrv_A 228 D-----------QHFPVFMNEKEDILWCTEMERVFGFPVHYTDVSNMSRLARQRLLGRSWSVPVIRHLFAPLKEY 291 (295)
T ss_dssp ------------CCSCEEETTEEECCCHHHHHHHHTCCTTTTCCTTCCHHHHHHHHHTSCCHHHHHHHHGGGGGG
T ss_pred C-----------CCcccccCCCcCCCCHHHHHHHcCCCHHHeeCCCcCHHHHhccEecCcCHHHHHHHHHHHHHH
Confidence 0 011236788999999999999999999999999889999999999999999999999999875
No 12
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=100.00 E-value=6.2e-60 Score=472.93 Aligned_cols=316 Identities=23% Similarity=0.344 Sum_probs=212.1
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhc---CC-CCeecCccccchh--------------
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF---GH-RPYQGNIQNLTAA-------------- 71 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~---~~-~~~~~di~~~~~~-------------- 71 (390)
..+++++|||||+||+++||++||++ +|+|+|+|+.|++||++|| |. .++++||.+++..
T Consensus 86 ~~~~~viDLFaG~GGlslG~~~aG~~--~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i 163 (482)
T 3me5_A 86 HYAFRFIDLFAGIGGIRRGFESIGGQ--CVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHI 163 (482)
T ss_dssp CCSEEEEEESCTTSHHHHHHHTTTEE--EEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHH
T ss_pred CccceEEEecCCccHHHHHHHHCCCE--EEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhh
Confidence 56899999999999999999999976 9999999999999999999 44 4578999998742
Q ss_pred --hhcccCccEEEeCCCCchhhhccCCC--------CC-CChhhhhHHHHHHhcccccCCCcEEEEeccccccCh---HH
Q 016377 72 --ELDMYGAHAWLLSPPCQPYTRQGLQK--------QS-SDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS---DT 137 (390)
Q Consensus 72 --~~~~~~~D~l~~g~PCq~fS~~g~~~--------~~-~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~---~~ 137 (390)
.++ ++|+|+||||||+||.+|+++ ++ +|+|+.||++++++++.+ +|++|+||||+|+++. ..
T Consensus 164 ~~~~~--~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~--rPk~fvlENV~gl~s~~~g~~ 239 (482)
T 3me5_A 164 RQHIP--EHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDAR--RPAMFVLENVKNLKSHDKGKT 239 (482)
T ss_dssp HHHSC--CCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHH--CCSEEEEEEETTTTTGGGGHH
T ss_pred hhcCC--CCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHc--CCcEEEEeCcHHHhcccCCcH
Confidence 223 599999999999999999754 23 378999999999999999 9999999999999884 48
Q ss_pred HHHHHHHHHhCCceeE---------EEEeCCCCcCCCccCcEEEEEEEeCCCcccccccccccccCCCCCCCCCCccccc
Q 016377 138 HAKMIEILANSDYLTQ---------EFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVIT 208 (390)
Q Consensus 138 ~~~~~~~l~~~GY~~~---------~~~l~a~~~G~pq~R~R~~~i~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~ 208 (390)
|+.+++.|+++||.+. +++|||.+| +||+|+|+|+||+++++.+.. .|.+|.+...
T Consensus 240 f~~i~~~L~~lGY~v~~~~~~g~~~~~vlnA~~~-vPQ~R~R~fivg~r~~~~~~~------~F~~~~~~~~-------- 304 (482)
T 3me5_A 240 FRIIMQTLDELGYDVADAEDNGPDDPKIIDGKHF-LPQHRERIVLVGFRRDLNLKA------DFTLRDISEC-------- 304 (482)
T ss_dssp HHHHHHHHHHTTEEETTTTCCSTTCTTEEEGGGT-SSBCCEEEEEEEEEGGGCCCT------TCCGGGGGGG--------
T ss_pred HHHHHHHHhcCCcEEEeccccCcccceeeecccc-CCccceEEEEEEEecCccccc------CcCccccccc--------
Confidence 9999999999999996 689999999 999999999999999864321 1222211100
Q ss_pred cCCCCCCccccccccCCchhhhhhccCCCCcccccccccccCcccccccCCCcccchhcccccccccccc---hhHHhhh
Q 016377 209 KHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVP---LSLIERW 285 (390)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~d~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 285 (390)
.| ....+++|+|+...+. ..++. .. ..++... .......
T Consensus 305 ----~p-------~~~~~l~diLe~~~~~------ky~l~-~~--------------------~~~~l~~~~~~~~~~g~ 346 (482)
T 3me5_A 305 ----FP-------AQRVTLAQLLDPMVEA------KYILT-PV--------------------LWKYLYRYAKKHQARGN 346 (482)
T ss_dssp ----SC-------SSCCCTGGGSCSSCCG------GGBCC-HH--------------------HHHHHHHHHHC------
T ss_pred ----cC-------CCcccHHHHhhccccc------ccccC-HH--------------------HHHHHHHHHHhhhcccC
Confidence 00 0012467777642210 00000 00 0000000 0011223
Q ss_pred cccccccCCCCcccccccCCcEEeecCCccceeecCCCC-CCCccccc----cCccccccHHHHHHhCCCC----CCeec
Q 016377 286 GSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKN-KGKASSLK----EQHLRYFTPREVANLHSFP----GDFQF 356 (390)
Q Consensus 286 g~~~d~~~p~~~~~~~~~~~y~r~~~~~~~~t~~~~~~~-~~~~~~ih----p~~~R~LT~rE~aRLQgFP----d~y~f 356 (390)
|..++++.|+.....|.|.. .++..+....++...... .+...+.| ....|+||||||||||||| ++|.+
T Consensus 347 gf~~~i~~~~~~~~~~~Ti~-a~~~k~gs~~~i~~~~~~~~~~~~~~~~~~~~~~~R~lTprE~~rlqgFp~~~~~~~~~ 425 (482)
T 3me5_A 347 GFGYGMVYPNNPQSVTRTLS-ARYYKDGAEILIDRGWDMATGEKDFDDPLNQQHRPRRLTPRECARLMGFEAPGEAKFRI 425 (482)
T ss_dssp ----CEECTTSGGGGTCCBC-CC---CCSSSEECCCCCHHHHHHCTTCTTGGGGCCEECCHHHHHHHHTSSCTTCCCSCC
T ss_pred CcccceecCCcccccceeeE-EeeeccCcceeecccccccCCccccccccccCCCcccCCHHHHHHHcCCCCccccceec
Confidence 45566666665554454443 222223222222211000 00011223 3568999999999999999 57777
Q ss_pred CCCCCHHHHHHHhCCccchHHHHHHHHHHHh
Q 016377 357 PHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 387 (390)
Q Consensus 357 ~g~~s~~~~y~qiGNAVp~~v~~~I~~~l~~ 387 (390)
.+ |.+++|+|+||||||+|+++|++.|.+
T Consensus 426 ~~--s~~~~y~q~GNsV~v~v~~~i~~~l~~ 454 (482)
T 3me5_A 426 PV--SDTQAYRQFGNSVVVPVFAAVAKLLEP 454 (482)
T ss_dssp CS--CHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred cC--CHHHHHHHcCCccChHHHHHHHHHHHH
Confidence 65 999999999999999999999999965
No 13
>2qrv_B DNA (cytosine-5)-methyltransferase 3-like; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=99.97 E-value=7.9e-32 Score=241.35 Aligned_cols=144 Identities=10% Similarity=0.069 Sum_probs=110.7
Q ss_pred CCcccccCCCCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCC-CeecCccccchhhhccc-Cc
Q 016377 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-PYQGNIQNLTAAELDMY-GA 78 (390)
Q Consensus 1 ~~~~~~~~~~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~-~~~~di~~~~~~~~~~~-~~ 78 (390)
|+.+++..+..+++++|||||+|| ||++|||+ + +.||++. ++.+||++++.+++++. ++
T Consensus 22 ~~~~~~~~~~~~~~vidLFaGig~---Gl~~aGf~--~--------------~~N~~~~~~~~~DI~~i~~~~i~~~~~~ 82 (230)
T 2qrv_B 22 MFETVPVWRRQPVRVLSLFEDIKK---ELTSLGFL--E--------------SGSDPGQLKHVVDVTDTVRKDVEEWGPF 82 (230)
T ss_dssp CCCCCCGGGCCCCCEEEESSCCTT---TTTTTTSC--C-------------------CCEEEESCCTTCCHHHHHHTCCC
T ss_pred hhcccchhhcCCceEEEeccChhH---HHHHCCCc--h--------------hhcCCCCcEecCChhhCCHhHhcccCCC
Confidence 567888888899999999999998 89999987 4 4788875 46899999998877642 69
Q ss_pred cEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCc-------EEEEeccccccChHHHHHHHHHHHhCCce
Q 016377 79 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH-------MLFVENVVGFETSDTHAKMIEILANSDYL 151 (390)
Q Consensus 79 D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~-------~~~~ENV~~~~~~~~~~~~~~~l~~~GY~ 151 (390)
|+|+||||||+||.+|. |+.||++++|+|+++ +|+ +|+||||+|+++.. ...+.+.|+
T Consensus 83 DlliGG~PCQ~FS~ag~-------rg~Lf~ef~Riv~~~--rPk~~~~~P~~fv~ENV~gL~~~~-~~~i~~~l~----- 147 (230)
T 2qrv_B 83 DLVYGATPPLGHTCDRP-------PSWYLFQFHRLLQYA--RPKPGSPRPFFWMFVDNLVLNKED-LDVASRFLE----- 147 (230)
T ss_dssp SEEEEECCCTTTSSCSC-------THHHHHHHHHHHHHH--CCCSSCCSCCEEEEEECSCSCHHH-HHHHHHHHT-----
T ss_pred CEEEECCCCCcccccCC-------CchHHHHHHHHHHHH--CcCcccCCCcEEEEeccHHhhhcc-HHHHHHHHc-----
Confidence 99999999999998873 789999999999999 788 89999999996543 445555553
Q ss_pred eEEEEeCCCCcCCCccCcEEEEEEEeCCC
Q 016377 152 TQEFILSPLQFGVPYSRPRYFCLAKRKPL 180 (390)
Q Consensus 152 ~~~~~l~a~~~G~pq~R~R~~~i~~~~~~ 180 (390)
+.+.+|||++||+||+|+| |+ +...+.
T Consensus 148 ~~~~vLnA~dfgvpQrRr~-f~-g~~~~~ 174 (230)
T 2qrv_B 148 MEPVTIPDVHGGSLQNAVR-VW-SNIPAI 174 (230)
T ss_dssp SCCEECCCCCSCC----CE-EE-ECSTTS
T ss_pred CCcEEEEcccCCcCcccEE-EE-eecCCC
Confidence 4567999999999999944 43 665543
No 14
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=99.97 E-value=1.4e-31 Score=255.63 Aligned_cols=143 Identities=8% Similarity=0.061 Sum_probs=117.8
Q ss_pred CcccccCCCCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCC-CeecCccccchhhhccc-Ccc
Q 016377 2 EKDMCKNDGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR-PYQGNIQNLTAAELDMY-GAH 79 (390)
Q Consensus 2 ~~~~~~~~~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~-~~~~di~~~~~~~~~~~-~~D 79 (390)
+.+++.-++.+++++|||||+|| ||++|||+ + +.||++. .+.+||++++.+++++. ++|
T Consensus 179 ~~~~~~~~~~~ikvidLFaGiGg---Gl~~aGf~--v--------------~~N~~~~~~~~~DI~~i~~~~i~~~~~~D 239 (386)
T 2pv0_B 179 FETVPVWRRQPVRVLSLFEDIKK---ELTSLGFL--E--------------SGSDPGQLKHVVDVTDTVRKDVEEWGPFD 239 (386)
T ss_dssp CCCCCGGGCCCCCEEEESSCCHH---HHHHTTSS--C--------------SSCCSCSEEEESCCTTCCHHHHHHSCCCS
T ss_pred ccccchhhhcCceeeEEeccCCh---hHhhcCcc--H--------------HHcCCCCcEEeCChhhCCHhHhcccCCCC
Confidence 45566667788999999999997 99999987 4 5899875 56799999998877542 699
Q ss_pred EEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCc-------EEEEeccccccChHHHHHHHHHHHhCCcee
Q 016377 80 AWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH-------MLFVENVVGFETSDTHAKMIEILANSDYLT 152 (390)
Q Consensus 80 ~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~-------~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~ 152 (390)
+|+||||||+||.+| +|+.||++++|+|+++ +|+ +|+||||+|+.+ +....+...|+ +
T Consensus 240 lliGG~PCQ~FS~A~-------~Rg~Lf~ef~Riv~~~--rPk~~~~~P~~fv~ENV~gL~~-~~~~~i~~~L~-----v 304 (386)
T 2pv0_B 240 LVYGATPPLGHTCDR-------PPSWYLFQFHRLLQYA--RPKPGSPGPFFWMFVDNLVLNK-EDLDVASRFLE-----M 304 (386)
T ss_dssp EEEEECCCTTTCSCS-------CTHHHHHHHHHHHHHH--SCCSSCCSCCEEEEEECSCSCH-HHHHHHHHHTT-----S
T ss_pred EEEECCCCCcccccC-------CcchHHHHHHHHHHHh--CCCcccCCCcEEEEEechhhhh-cchHHHHHHHc-----C
Confidence 999999999999985 4789999999999999 787 999999999954 33445555443 6
Q ss_pred EEEEeCCCCcCCCccCcEEEEEEEeCCC
Q 016377 153 QEFILSPLQFGVPYSRPRYFCLAKRKPL 180 (390)
Q Consensus 153 ~~~~l~a~~~G~pq~R~R~~~i~~~~~~ 180 (390)
.+.||||++||+||+|+| ++|.+++.
T Consensus 305 ~~~VLnA~dyGVPQrRrR--f~g~~~~~ 330 (386)
T 2pv0_B 305 EPVTIPDVHGGSLQNAVR--VWSNIPAI 330 (386)
T ss_dssp CCCEEECCCSSSCCCEEE--EEECSSSS
T ss_pred CeEEEEccccCccccccE--EEEECCCc
Confidence 778999999999999999 45776654
No 15
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.02 E-value=9.4e-10 Score=105.49 Aligned_cols=159 Identities=14% Similarity=0.018 Sum_probs=108.7
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC--------CCCeecCccccchhhh-cccCccEE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG--------HRPYQGNIQNLTAAEL-DMYGAHAW 81 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~--------~~~~~~di~~~~~~~~-~~~~~D~l 81 (390)
..-+|||||||.|++++.+...|. .|.++|+++.+++..+.|.. -.++++|+.++..... ....+|++
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 345899999999999999999885 58999999999999998863 1356788877643211 12259999
Q ss_pred EeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCc-EEEEeccccc-cChHHHHHHHH-HHHhCCceeEEEEeC
Q 016377 82 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH-MLFVENVVGF-ETSDTHAKMIE-ILANSDYLTQEFILS 158 (390)
Q Consensus 82 ~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~-~~~~ENV~~~-~~~~~~~~~~~-~l~~~GY~~~~~~l~ 158 (390)
+..|||.+.+..+......+....++....+ .+ +|. ++++++.... ++...+..++. .+.+.||.+....+.
T Consensus 230 i~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~---~L--kpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~~~e~~ 304 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLFDHLPLMLDICRE---IL--SPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVASGELV 304 (332)
T ss_dssp EECCCSEEECTTCCEEEHHHHHHHHHHHHHH---TB--CTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEEEEEEE
T ss_pred EECCccccCCchHHHHHHHHHHHHHHHHHHH---hc--CcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEEEEEEe
Confidence 9999998776332110011111223333333 34 443 4477776554 34445555544 667899999988888
Q ss_pred CCCcCCCcc-CcEEEEEEEe
Q 016377 159 PLQFGVPYS-RPRYFCLAKR 177 (390)
Q Consensus 159 a~~~G~pq~-R~R~~~i~~~ 177 (390)
...+++||. +.|++.+|+.
T Consensus 305 ~p~~~~~q~~~~r~lp~g~~ 324 (332)
T 2igt_A 305 IREAGLDGKTPGRVLSTSLF 324 (332)
T ss_dssp EECCCSSSCCCCCEEEEEEE
T ss_pred cccCCcccccCCceeeeEEE
Confidence 889999999 9998877653
No 16
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.51 E-value=3.5e-07 Score=85.29 Aligned_cols=120 Identities=13% Similarity=0.126 Sum_probs=93.6
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccEEEeC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
.-+|+|+|||.|++++.+...|.. .|.++|+++.+++..+.|.. + ..+++|+.++.. ...+|+++..
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~----~~~fD~Vi~~ 199 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG----ENIADRILMG 199 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC----CSCEEEEEEC
T ss_pred CCEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc----cCCccEEEEC
Confidence 568999999999999999999975 79999999999999988853 1 246788888764 2359999999
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccc-cccChHHHHHHHHHHHhCCceeEE
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV-GFETSDTHAKMIEILANSDYLTQE 154 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~-~~~~~~~~~~~~~~l~~~GY~~~~ 154 (390)
+|+.. ..++.++.++++. .-.+++.++++ +......++.+.+.+++.||.+..
T Consensus 200 ~p~~~--------------~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 200 YVVRT--------------HEFIPKALSIAKD---GAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp CCSSG--------------GGGHHHHHHHEEE---EEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred CchhH--------------HHHHHHHHHHCCC---CeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 88432 2356667776654 45688889986 454455688889999999998765
No 17
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.47 E-value=1e-06 Score=86.38 Aligned_cols=144 Identities=19% Similarity=0.161 Sum_probs=94.9
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C---CCeecCccccchhhhc-ccCccEE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H---RPYQGNIQNLTAAELD-MYGAHAW 81 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~---~~~~~di~~~~~~~~~-~~~~D~l 81 (390)
..-+|+|+|||.|++++.+...|.. .|.++|+++.|++..+.|.. . .++.+|+.++...... ...+|++
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~--~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCS--QVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 3458999999999999999998865 89999999999999998863 1 3467788776432111 2259999
Q ss_pred EeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCC-cEEEEeccccccChHHHHHHH-HHHHhCCceeE--EEEe
Q 016377 82 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPP-HMLFVENVVGFETSDTHAKMI-EILANSDYLTQ--EFIL 157 (390)
Q Consensus 82 ~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P-~~~~~ENV~~~~~~~~~~~~~-~~l~~~GY~~~--~~~l 157 (390)
+..||+...|....... ......++...++ .+ +| -++++.+.+..+....+..++ +.+.+.|+.+. ....
T Consensus 298 i~dpP~~~~~~~~~~~~-~~~~~~~l~~~~~---~L--kpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~~~~ 371 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGA-CRGYKDINMLAIQ---LL--NEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFR 371 (396)
T ss_dssp EECCSSTTTCSSSSSCC-CTHHHHHHHHHHH---TE--EEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred EECCCCCCCChhHHHHH-HHHHHHHHHHHHH---hc--CCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEEEECC
Confidence 99999877665332211 1222233344444 44 34 477777777776655555544 47788886543 3344
Q ss_pred CCCCc
Q 016377 158 SPLQF 162 (390)
Q Consensus 158 ~a~~~ 162 (390)
.+.+|
T Consensus 372 ~~~d~ 376 (396)
T 3c0k_A 372 QAADH 376 (396)
T ss_dssp CCTTS
T ss_pred CCCCC
Confidence 44444
No 18
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.24 E-value=2.7e-05 Score=67.13 Aligned_cols=147 Identities=12% Similarity=0.012 Sum_probs=100.3
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhhcccCccEEEeCCCCch
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSPPCQP 89 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~ 89 (390)
...+|+|+.||.|.++..+...|. .+.++|+++.+++..+.+++. .++.+|+.++. ++...+|+++..+++-.
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~~~~D~i~~~~~~~~ 119 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGH---DVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQ---ISETDFDLIVSAGNVMG 119 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSEEEECCTTTSC---CCCCCEEEEEECCCCGG
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC---cEEEEcCCHHHHHHHHHhCCCCcEEEcccccCC---CCCCceeEEEECCcHHh
Confidence 456899999999999999999875 489999999999999999876 45678888763 33335999998766544
Q ss_pred hhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEe-ccccccChHHHHHHHHHHHhCCceeEEEEeCCCCcCCCccC
Q 016377 90 YTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVE-NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSR 168 (390)
Q Consensus 90 fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~E-NV~~~~~~~~~~~~~~~l~~~GY~~~~~~l~a~~~G~pq~R 168 (390)
+.. .+....++.++.++++. .-.+++.. +..+ .....+.+.|++.|+.+....-+.......+..
T Consensus 120 ~~~-------~~~~~~~l~~~~~~l~~---~G~l~~~~~~~~~----~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~ 185 (195)
T 3cgg_A 120 FLA-------EDGREPALANIHRALGA---DGRAVIGFGAGRG----WVFGDFLEVAERVGLELENAFESWDLKPFVQGS 185 (195)
T ss_dssp GSC-------HHHHHHHHHHHHHHEEE---EEEEEEEEETTSS----CCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTC
T ss_pred hcC-------hHHHHHHHHHHHHHhCC---CCEEEEEeCCCCC----cCHHHHHHHHHHcCCEEeeeecccccCcCCCCC
Confidence 320 12234455555565543 12233222 2111 136778888999999987766554555566677
Q ss_pred cEEEEEEEe
Q 016377 169 PRYFCLAKR 177 (390)
Q Consensus 169 ~R~~~i~~~ 177 (390)
.++++++.+
T Consensus 186 ~~~~~v~~k 194 (195)
T 3cgg_A 186 EFLVAVFTK 194 (195)
T ss_dssp SEEEEEEEE
T ss_pred cEEEEEEec
Confidence 788877754
No 19
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.22 E-value=3.8e-06 Score=78.11 Aligned_cols=121 Identities=12% Similarity=0.109 Sum_probs=84.7
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
..-+|+|+|||+|++++.+...|-. .|+|+|+++.|.+..+.|.. + .++++|..++..+ ..+|.++.
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g~~--~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~----~~~D~Vi~ 198 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGE----NIADRILM 198 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCC----SCEEEEEE
T ss_pred CCCEEEEecCcCcHHHHHHHHhcCC--eEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccc----cCCCEEEE
Confidence 4568999999999999988888854 79999999999999999963 2 3467898887542 24999999
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecccccc-ChHHHHHHHHHHHhCCceeEE
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE-TSDTHAKMIEILANSDYLTQE 154 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~-~~~~~~~~~~~l~~~GY~~~~ 154 (390)
++|+-.. ..+...+++++. .--+.+-+||+.-. ....++.+.+.....||.+..
T Consensus 199 ~~p~~~~--------------~~l~~a~~~lk~---gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~ 253 (278)
T 3k6r_A 199 GYVVRTH--------------EFIPKALSIAKD---GAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp CCCSSGG--------------GGHHHHHHHEEE---EEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred CCCCcHH--------------HHHHHHHHHcCC---CCEEEEEeeecccccchhHHHHHHHHHHHcCCcEEE
Confidence 9985321 234455665553 23334456775421 222456666777889998753
No 20
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.19 E-value=2.6e-05 Score=68.55 Aligned_cols=117 Identities=15% Similarity=0.279 Sum_probs=82.2
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----CCeecCccccchhhhcccCccEEEeCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
..-+|+|++||.|+++..+...|.. .+.++|+++.+++..+.|... .++++|+.++. . .+|+++..|
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----~-~~D~v~~~~ 120 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAK--EVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN-----S-RVDIVIMNP 120 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC-----C-CCSEEEECC
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC-----C-CCCEEEEcC
Confidence 4568999999999999999998865 899999999999999999753 35678887763 2 499999999
Q ss_pred CCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeE
Q 016377 86 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQ 153 (390)
Q Consensus 86 PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~ 153 (390)
|+...+. .....++.++.+++. .++++- +........+.+.+.+.||.+.
T Consensus 121 p~~~~~~--------~~~~~~l~~~~~~l~------~~~~~~----~~~~~~~~~~~~~l~~~g~~~~ 170 (207)
T 1wy7_A 121 PFGSQRK--------HADRPFLLKAFEISD------VVYSIH----LAKPEVRRFIEKFSWEHGFVVT 170 (207)
T ss_dssp CCSSSST--------TTTHHHHHHHHHHCS------EEEEEE----ECCHHHHHHHHHHHHHTTEEEE
T ss_pred CCccccC--------CchHHHHHHHHHhcC------cEEEEE----eCCcCCHHHHHHHHHHCCCeEE
Confidence 9765431 111223444444441 123222 1123456777788899998765
No 21
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.06 E-value=3.4e-05 Score=70.69 Aligned_cols=155 Identities=10% Similarity=0.126 Sum_probs=91.3
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
..-+|||++||.|.+++.+...+.. .|.++|+++.+++.-+.|... .++++|+.++... +....+|+++.
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~-~~~~~fD~Ii~ 125 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDL-IPKERADIVTC 125 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGT-SCTTCEEEEEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhh-hccCCccEEEE
Confidence 4568999999999999999988764 799999999999998888631 3467898887532 33336999999
Q ss_pred CCCCchhhhccCCCCC-------CC---hhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeE
Q 016377 84 SPPCQPYTRQGLQKQS-------SD---ARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQ 153 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~-------~d---~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~ 153 (390)
.||+-..+..+..... .. ....++..+.++++. .-.++++- .......++..+.+.|+.+.
T Consensus 126 npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~------~~~~~~~~~~~l~~~~~~~~ 196 (259)
T 3lpm_A 126 NPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQ---GGKANFVH------RPERLLDIIDIMRKYRLEPK 196 (259)
T ss_dssp CCCC-----------------------HHHHHHHHHHHHHEEE---EEEEEEEE------CTTTHHHHHHHHHHTTEEEE
T ss_pred CCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccC---CcEEEEEE------cHHHHHHHHHHHHHCCCceE
Confidence 9998766333322110 00 011233333343332 22444422 22246778888999998765
Q ss_pred EEEeCCCCcCCCccCcEEEEEEEeCC
Q 016377 154 EFILSPLQFGVPYSRPRYFCLAKRKP 179 (390)
Q Consensus 154 ~~~l~a~~~G~pq~R~R~~~i~~~~~ 179 (390)
....-...-|.+ -.|+++.+.+.+
T Consensus 197 ~~~~v~~~~~~~--~~~~l~~~~k~~ 220 (259)
T 3lpm_A 197 RIQFVHPRSDRE--ANTVLVEGIKDG 220 (259)
T ss_dssp EEEEEESSTTSC--CSEEEEEEEETC
T ss_pred EEEEeecCCCCC--cEEEEEEEEeCC
Confidence 443222222222 245666566543
No 22
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.04 E-value=1.2e-05 Score=78.42 Aligned_cols=79 Identities=9% Similarity=0.119 Sum_probs=58.9
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-------C-CCeecCccccchhhh-cccCccEE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-------H-RPYQGNIQNLTAAEL-DMYGAHAW 81 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-------~-~~~~~di~~~~~~~~-~~~~~D~l 81 (390)
..-+|||+|||.|++++.+...|.. .|.++|+++.|++..+.|.. . .++++|+.++..... .+..+|++
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~--~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAM--ATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBS--EEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 3458999999999999999988865 89999999999998888852 1 346788877533211 12259999
Q ss_pred EeCCCCchhh
Q 016377 82 LLSPPCQPYT 91 (390)
Q Consensus 82 ~~g~PCq~fS 91 (390)
+..||+-+.|
T Consensus 290 i~DPP~~~~~ 299 (385)
T 2b78_A 290 IIDPPSFARN 299 (385)
T ss_dssp EECCCCC---
T ss_pred EECCCCCCCC
Confidence 9999986544
No 23
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.96 E-value=1.4e-05 Score=78.09 Aligned_cols=127 Identities=16% Similarity=0.117 Sum_probs=79.1
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----CCCeecCccccchhhhcccCccEEEeCCC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----HRPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
.-+|||+|||.|++++.+...|. + |.++|+++.+++..+.|.. ..+.++|+.++... +.+ .+|+++..||
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga--~-V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~-~~~-~fD~Ii~dpP 289 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGA--Y-ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRG-LEG-PFHHVLLDPP 289 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTC--E-EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHT-CCC-CEEEEEECCC
T ss_pred CCeEEEcccchhHHHHHHHHcCC--e-EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHH-hcC-CCCEEEECCC
Confidence 56899999999999999999884 3 9999999999999888863 23557777765332 233 4999999999
Q ss_pred CchhhhccCCCCCCChhhhhHHHHH-HhcccccCCC--cEEEEeccccccChHHH-HHHHHHHHhCCce
Q 016377 87 CQPYTRQGLQKQSSDARAFSFLKIL-ELIPHTVKPP--HMLFVENVVGFETSDTH-AKMIEILANSDYL 151 (390)
Q Consensus 87 Cq~fS~~g~~~~~~d~r~~l~~~~~-~~i~~~~~~P--~~~~~ENV~~~~~~~~~-~~~~~~l~~~GY~ 151 (390)
|-.-|.. ...+. ...+.+++ .+++.+ +| .+++..+...+ +...| +.+.+.+.+.|..
T Consensus 290 ~f~~~~~----~~~~~-~~~~~~ll~~a~~~L--kpGG~Lv~~s~s~~~-~~~~f~~~v~~a~~~~g~~ 350 (393)
T 4dmg_A 290 TLVKRPE----ELPAM-KRHLVDLVREALRLL--AEEGFLWLSSCSYHL-RLEDLLEVARRAAADLGRR 350 (393)
T ss_dssp CCCSSGG----GHHHH-HHHHHHHHHHHHHTE--EEEEEEEEEECCTTS-CHHHHHHHHHHHHHHHTCC
T ss_pred cCCCCHH----HHHHH-HHHHHHHHHHHHHhc--CCCCEEEEEECCCCC-CHHHHHHHHHHHHHHhCCe
Confidence 9222211 11110 11222332 222233 45 45557776655 33334 4455556666643
No 24
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.92 E-value=0.00027 Score=63.06 Aligned_cols=152 Identities=13% Similarity=-0.005 Sum_probs=88.8
Q ss_pred CCceEEeeecC-chhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCC-----CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSG-IGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH-----RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G-~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~-----~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
..-+|||++|| .|.++..+... +. .|.++|+++.+++.-+.|... .++++|+..+.. +.+..+|+++.
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~--~~~~~fD~I~~ 129 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFNC---KVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKG--VVEGTFDVIFS 129 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHCC---EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTT--TCCSCEEEEEE
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhh--cccCceeEEEE
Confidence 45689999999 99999999887 43 599999999999998888632 356778754432 33336999999
Q ss_pred CCCCchhhhccCCC---CC---CChhhhhHHHHHHhccc-ccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEEEE
Q 016377 84 SPPCQPYTRQGLQK---QS---SDARAFSFLKILELIPH-TVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFI 156 (390)
Q Consensus 84 g~PCq~fS~~g~~~---~~---~d~r~~l~~~~~~~i~~-~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~ 156 (390)
.||+-..+...... .. .+.. .++..+++.+.. + +|.=.++=-++. .......+.+.+++.||.+...-
T Consensus 130 npp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~L--kpgG~l~~~~~~--~~~~~~~~~~~l~~~g~~~~~~~ 204 (230)
T 3evz_A 130 APPYYDKPLGRVLTEREAIGGGKYGE-EFSVKLLEEAFDHL--NPGGKVALYLPD--KEKLLNVIKERGIKLGYSVKDIK 204 (230)
T ss_dssp CCCCC---------------CCSSSC-HHHHHHHHHHGGGE--EEEEEEEEEEES--CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCcCCccccccChhhhhccCccch-HHHHHHHHHHHHHh--CCCeEEEEEecc--cHhHHHHHHHHHHHcCCceEEEE
Confidence 99986655421100 00 0111 123444433333 3 453222211221 11357788899999999776654
Q ss_pred eCCCCcCCCccCcEEEEEEEeC
Q 016377 157 LSPLQFGVPYSRPRYFCLAKRK 178 (390)
Q Consensus 157 l~a~~~G~pq~R~R~~~i~~~~ 178 (390)
+. .-.+.+.+++..+.
T Consensus 205 ~~------~g~~~~~~l~f~~~ 220 (230)
T 3evz_A 205 FK------VGTRWRHSLIFFKG 220 (230)
T ss_dssp EC------CCC-CEEEEEEECC
T ss_pred ec------CCCeEEEEEEEecc
Confidence 42 22344555555544
No 25
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.85 E-value=0.00067 Score=57.79 Aligned_cols=141 Identities=13% Similarity=0.134 Sum_probs=93.8
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCCCchhh
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPPCQPYT 91 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~fS 91 (390)
.-+|||+.||.|.++..+...| .|.++|+++.+++. .-.-.++++|+.+.... ..+|+++..+|-...+
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~---~~~~~~~~~d~~~~~~~----~~fD~i~~n~~~~~~~ 92 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES---HRGGNLVRADLLCSINQ----ESVDVVVFNPPYVPDT 92 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT---CSSSCEEECSTTTTBCG----GGCSEEEECCCCBTTC
T ss_pred CCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc---ccCCeEEECChhhhccc----CCCCEEEECCCCccCC
Confidence 3499999999999999999888 59999999999988 11125678898773221 2599999998866544
Q ss_pred hccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEEEEeCCCCcCCCccCcEE
Q 016377 92 RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRY 171 (390)
Q Consensus 92 ~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l~a~~~G~pq~R~R~ 171 (390)
......+ ......++.++++.+ - .-.+++.++... ..+.+.+.|++.||.+....-... | ..|+
T Consensus 93 ~~~~~~~-~~~~~~~~~~~~~~l--p--gG~l~~~~~~~~-----~~~~l~~~l~~~gf~~~~~~~~~~--~----~e~~ 156 (170)
T 3q87_B 93 DDPIIGG-GYLGREVIDRFVDAV--T--VGMLYLLVIEAN-----RPKEVLARLEERGYGTRILKVRKI--L----GETV 156 (170)
T ss_dssp CCTTTBC-CGGGCHHHHHHHHHC--C--SSEEEEEEEGGG-----CHHHHHHHHHHTTCEEEEEEEEEC--S----SSEE
T ss_pred ccccccC-CcchHHHHHHHHhhC--C--CCEEEEEEecCC-----CHHHHHHHHHHCCCcEEEEEeecc--C----CceE
Confidence 3322111 111234566666666 2 566777675432 366788889999998765544322 2 3588
Q ss_pred EEEEEeCC
Q 016377 172 FCLAKRKP 179 (390)
Q Consensus 172 ~~i~~~~~ 179 (390)
+++-.++.
T Consensus 157 ~~~~~~~~ 164 (170)
T 3q87_B 157 YIIKGEKS 164 (170)
T ss_dssp EEEEEECC
T ss_pred EEEEEecc
Confidence 88766654
No 26
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.82 E-value=0.00013 Score=67.56 Aligned_cols=123 Identities=16% Similarity=0.171 Sum_probs=84.0
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
..-+|+|+|||.|.+++-+...+- ...|.++|+++.|++..+.|.. + .++++|+.++ +. . ..+|+++..
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~--~-~~~D~Vi~d 193 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL--K-DVADRVIMG 193 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC--T-TCEEEEEEC
T ss_pred CCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc--c-CCceEEEEC
Confidence 345899999999999999988642 1269999999999999888863 1 3578899887 33 2 259999999
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHh-CCceeEEE
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILAN-SDYLTQEF 155 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~-~GY~~~~~ 155 (390)
||. ....++..+++.++. .-.+++..+...-.....+..+++.+.+ .||.+...
T Consensus 194 ~p~--------------~~~~~l~~~~~~Lkp---gG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (272)
T 3a27_A 194 YVH--------------KTHKFLDKTFEFLKD---RGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLIDY 248 (272)
T ss_dssp CCS--------------SGGGGHHHHHHHEEE---EEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEEEE
T ss_pred Ccc--------------cHHHHHHHHHHHcCC---CCEEEEEEcCccccccccHHHHHHHHHHHhCCeeEEe
Confidence 984 112356666666554 3456666666432222346666666665 57877643
No 27
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.78 E-value=0.00032 Score=59.64 Aligned_cols=120 Identities=18% Similarity=0.156 Sum_probs=81.1
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
..-+++|+.||.|.++..+.. +.. .+.++|+++.+++..+.|.. . .++.+|+.+. ++...+|+++..
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~-~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~~~~~~D~i~~~ 107 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK-RCK--FVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDV----LDKLEFNKAFIG 107 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT-TSS--EEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHH----GGGCCCSEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHh-cCC--eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCcccc----ccCCCCcEEEEC
Confidence 446899999999999999988 333 79999999999999888863 2 3456777662 232359999988
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEEEEeCCCC
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQ 161 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l~a~~ 161 (390)
.+ .....++.++.++ - .-.+++... .......+.+.|++.||.+....+....
T Consensus 108 ~~--------------~~~~~~l~~~~~~---~--gG~l~~~~~-----~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 160 (183)
T 2yxd_A 108 GT--------------KNIEKIIEILDKK---K--INHIVANTI-----VLENAAKIINEFESRGYNVDAVNVFISY 160 (183)
T ss_dssp SC--------------SCHHHHHHHHHHT---T--CCEEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred Cc--------------ccHHHHHHHHhhC---C--CCEEEEEec-----ccccHHHHHHHHHHcCCeEEEEEeeeeh
Confidence 77 1112334444443 1 334444432 2235778899999999988776544433
No 28
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=97.75 E-value=9.1e-05 Score=70.75 Aligned_cols=109 Identities=17% Similarity=0.245 Sum_probs=77.5
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
..-+|+|+|||.|++++. .. |.. .|.++|+++.|++..+.|.. . .++++|+.++. ..+|+++.
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~~~--~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~------~~fD~Vi~ 264 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-NAK--KIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD------VKGNRVIM 264 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-TSS--EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC------CCEEEEEE
T ss_pred CCCEEEEccCccCHHHHh-cc-CCC--EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc------CCCcEEEE
Confidence 445899999999999998 55 543 89999999999999998852 1 35678888764 25999999
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhC-Ccee
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANS-DYLT 152 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~-GY~~ 152 (390)
.||.... .++..+.++++. ...+++.++... ...+.+.+.+. ||.+
T Consensus 265 dpP~~~~--------------~~l~~~~~~L~~---gG~l~~~~~~~~------~~~~~~~l~~~~~~~i 311 (336)
T 2yx1_A 265 NLPKFAH--------------KFIDKALDIVEE---GGVIHYYTIGKD------FDKAIKLFEKKCDCEV 311 (336)
T ss_dssp CCTTTGG--------------GGHHHHHHHEEE---EEEEEEEEEESS------SHHHHHHHHHHSEEEE
T ss_pred CCcHhHH--------------HHHHHHHHHcCC---CCEEEEEEeecC------chHHHHHHHHhcCCcE
Confidence 9884321 456666776654 356777788877 22333444444 6654
No 29
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=97.74 E-value=3.3e-05 Score=75.47 Aligned_cols=79 Identities=18% Similarity=0.103 Sum_probs=60.6
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhh-cccCccEEE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAEL-DMYGAHAWL 82 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~-~~~~~D~l~ 82 (390)
..-+|+|+|||.|++++.+...|.. .|.++|+++.+++..+.|... ..+++|+.++..... ....+|+++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~--~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi 294 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGAD--EVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEE
Confidence 4568999999999999999998865 899999999999998888631 346778877643211 122599999
Q ss_pred eCCCCchhh
Q 016377 83 LSPPCQPYT 91 (390)
Q Consensus 83 ~g~PCq~fS 91 (390)
..||+-..|
T Consensus 295 ~dpP~~~~~ 303 (396)
T 2as0_A 295 LDPPAFVQH 303 (396)
T ss_dssp ECCCCSCSS
T ss_pred ECCCCCCCC
Confidence 999975433
No 30
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.70 E-value=5.1e-05 Score=65.82 Aligned_cols=74 Identities=19% Similarity=0.288 Sum_probs=58.7
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC------CCeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH------RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~------~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
..-+|||++||.|.+++.+...|.. .|.++|+++.+++..+.|... .++++|+.++... +....+|+++..
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~fD~i~~~ 120 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGAA--SVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAA-GTTSPVDLVLAD 120 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS--EEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHH-CCSSCCSEEEEC
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhh-ccCCCccEEEEC
Confidence 4568999999999999988888865 899999999999999988632 3567888876432 222369999999
Q ss_pred CCC
Q 016377 85 PPC 87 (390)
Q Consensus 85 ~PC 87 (390)
+|.
T Consensus 121 ~p~ 123 (189)
T 3p9n_A 121 PPY 123 (189)
T ss_dssp CCT
T ss_pred CCC
Confidence 883
No 31
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.69 E-value=4.1e-05 Score=69.05 Aligned_cols=77 Identities=21% Similarity=0.223 Sum_probs=62.9
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC------C-CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG------H-RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~------~-~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
..-+|||++||.|+++..+...|. .|.++|+++.+++..+.|.. . .++++|+.++.. ...+|+++.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~D~v~~ 150 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGM---RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS----FLKADVVFL 150 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG----GCCCSEEEE
T ss_pred CCCEEEECccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc----cCCCCEEEE
Confidence 456899999999999999999983 68999999999999988863 1 356788887652 225999999
Q ss_pred CCCCchhhhcc
Q 016377 84 SPPCQPYTRQG 94 (390)
Q Consensus 84 g~PCq~fS~~g 94 (390)
.+||...+...
T Consensus 151 ~~~~~~~~~~~ 161 (241)
T 3gdh_A 151 SPPWGGPDYAT 161 (241)
T ss_dssp CCCCSSGGGGG
T ss_pred CCCcCCcchhh
Confidence 99999877653
No 32
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.67 E-value=3.3e-05 Score=68.08 Aligned_cols=71 Identities=13% Similarity=0.221 Sum_probs=56.2
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC------CCeecCccccchhhhcccCccEEEeCC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH------RPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~------~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
.-+|||++||.|.+++.+...|.. .|.++|+++.+++..+.|... .++++|+.++.+. ....+|+++..|
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~~--~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~--~~~~fD~V~~~~ 130 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYAA--GATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQ--KGTPHNIVFVDP 130 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSS--CCCCEEEEEECC
T ss_pred CCeEEEeCCCcCHHHHHHHhcCCC--EEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhh--cCCCCCEEEECC
Confidence 468999999999999988777865 899999999999999988732 3467787764322 222599999999
Q ss_pred C
Q 016377 86 P 86 (390)
Q Consensus 86 P 86 (390)
|
T Consensus 131 p 131 (202)
T 2fpo_A 131 P 131 (202)
T ss_dssp S
T ss_pred C
Confidence 8
No 33
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=97.67 E-value=0.00064 Score=59.91 Aligned_cols=145 Identities=14% Similarity=0.029 Sum_probs=92.7
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhccc-CccEEEeCCCCchh
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMY-GAHAWLLSPPCQPY 90 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~-~~D~l~~g~PCq~f 90 (390)
..+|||+-||.|.++..+...|. .+.++|+++.+++..+.+.....+..|+.++........ .+|+++......
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-- 127 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADRGI---EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-- 127 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC--
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC---EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh--
Confidence 47999999999999999999886 488999999999999988444667788877743322222 499999865533
Q ss_pred hhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccc------------------cccC--------hHHHHHHHHH
Q 016377 91 TRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV------------------GFET--------SDTHAKMIEI 144 (390)
Q Consensus 91 S~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~------------------~~~~--------~~~~~~~~~~ 144 (390)
..+...++.++.++++- .-.+++.+..+ ++.. ....+.+.+.
T Consensus 128 ---------~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (227)
T 3e8s_A 128 ---------HQDIIELLSAMRTLLVP---GGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNA 195 (227)
T ss_dssp ---------SSCCHHHHHHHHHTEEE---EEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHH
T ss_pred ---------hhhHHHHHHHHHHHhCC---CeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHH
Confidence 12223456666665543 22333333211 1110 0146889999
Q ss_pred HHhCCceeEEEEeCCCCcCCCcc--CcEEEEEEEe
Q 016377 145 LANSDYLTQEFILSPLQFGVPYS--RPRYFCLAKR 177 (390)
Q Consensus 145 l~~~GY~~~~~~l~a~~~G~pq~--R~R~~~i~~~ 177 (390)
|++.|+.+....- ...|.. ...+++++.+
T Consensus 196 l~~aGf~~~~~~~----~~~~~~~~~~~~~~va~k 226 (227)
T 3e8s_A 196 LDMAGLRLVSLQE----PQHPQSAVPQSLLMVAER 226 (227)
T ss_dssp HHHTTEEEEEEEC----CCCTTCSSCSCEEEEEEE
T ss_pred HHHcCCeEEEEec----CCCCCCCCceeEEEEeec
Confidence 9999998876543 112222 3456676654
No 34
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.66 E-value=0.00014 Score=70.35 Aligned_cols=115 Identities=18% Similarity=0.255 Sum_probs=75.1
Q ss_pred ceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC------CCeecCccccchhhhc------------
Q 016377 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH------RPYQGNIQNLTAAELD------------ 74 (390)
Q Consensus 13 ~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~------~~~~~di~~~~~~~~~------------ 74 (390)
-+|+|||||.|.+++.+.. +.. .|.++|+++.|++..+.|... .++.+|+.++......
T Consensus 215 ~~vLDl~cG~G~~~l~la~-~~~--~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALAR-NFD--RVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp SEEEEESCTTSHHHHHHGG-GSS--EEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CEEEEccCCCCHHHHHHHh-cCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc
Confidence 4699999999999998876 433 799999999999999888631 3467788776432111
Q ss_pred -ccCccEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeE
Q 016377 75 -MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQ 153 (390)
Q Consensus 75 -~~~~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~ 153 (390)
...+|+++..||..+ +..++++.+.. ...++.+..-+. ++..-+..|.+ ||.+.
T Consensus 292 ~~~~fD~Vv~dPPr~g----------------~~~~~~~~l~~---~g~ivyvsc~p~-----t~ard~~~l~~-~y~~~ 346 (369)
T 3bt7_A 292 KSYQCETIFVDPPRSG----------------LDSETEKMVQA---YPRILYISCNPE-----TLCKNLETLSQ-THKVE 346 (369)
T ss_dssp GGCCEEEEEECCCTTC----------------CCHHHHHHHTT---SSEEEEEESCHH-----HHHHHHHHHHH-HEEEE
T ss_pred ccCCCCEEEECcCccc----------------cHHHHHHHHhC---CCEEEEEECCHH-----HHHHHHHHHhh-CcEEE
Confidence 124899999999642 23345555553 355666654332 33333344543 68775
Q ss_pred EE
Q 016377 154 EF 155 (390)
Q Consensus 154 ~~ 155 (390)
..
T Consensus 347 ~~ 348 (369)
T 3bt7_A 347 RL 348 (369)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 35
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.66 E-value=4.7e-05 Score=67.00 Aligned_cols=73 Identities=11% Similarity=0.220 Sum_probs=56.4
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-------C-CCeecCccccchhhhcccC-ccEEE
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-------H-RPYQGNIQNLTAAELDMYG-AHAWL 82 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-------~-~~~~~di~~~~~~~~~~~~-~D~l~ 82 (390)
.-+|||++||.|++++.+...|.. .|.++|+++.+++..+.|.. . .++++|+.++... +.... +|+++
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~~fD~I~ 130 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQAK--KVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQ-PQNQPHFDVVF 130 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTS-CCSSCCEEEEE
T ss_pred CCeEEEcCCccCHHHHHHHHccCC--EEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHh-hccCCCCCEEE
Confidence 458999999999999987777865 89999999999999998863 1 3456777665322 12236 89999
Q ss_pred eCCCC
Q 016377 83 LSPPC 87 (390)
Q Consensus 83 ~g~PC 87 (390)
..+|.
T Consensus 131 ~~~~~ 135 (201)
T 2ift_A 131 LDPPF 135 (201)
T ss_dssp ECCCS
T ss_pred ECCCC
Confidence 99983
No 36
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.65 E-value=0.0015 Score=56.71 Aligned_cols=144 Identities=10% Similarity=0.011 Sum_probs=96.5
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhhcccCccEEEeCCCCchh
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSPPCQPY 90 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~f 90 (390)
..+|||+.||.|.++.-+...|.+ +.++|+++.+++..+.+++. ..+++|+.++. +....+|+++....-.-+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~ 115 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQ---IEGLEPATRLVELARQTHPSVTFHHGTITDLS---DSPKRWAGLLAWYSLIHM 115 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCC---EEEECCCHHHHHHHHHHCTTSEEECCCGGGGG---GSCCCEEEEEEESSSTTC
T ss_pred CCeEEEecCCCCHHHHHHHhcCCe---EEEEeCCHHHHHHHHHhCCCCeEEeCcccccc---cCCCCeEEEEehhhHhcC
Confidence 568999999999999999999875 89999999999999999876 45778888764 333369999975432211
Q ss_pred hhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccC----------hHHHHHHHHHHHhCCceeEEEEeCCC
Q 016377 91 TRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET----------SDTHAKMIEILANSDYLTQEFILSPL 160 (390)
Q Consensus 91 S~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~----------~~~~~~~~~~l~~~GY~~~~~~l~a~ 160 (390)
+ .++...++.++.++++. .-.+++......-.. ......+.+.|++.|+.+.....-..
T Consensus 116 ~--------~~~~~~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 116 G--------PGELPDALVALRMAVED---GGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR 184 (203)
T ss_dssp C--------TTTHHHHHHHHHHTEEE---EEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT
T ss_pred C--------HHHHHHHHHHHHHHcCC---CcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC
Confidence 1 12334456666665543 123444332222100 01367888999999998876654332
Q ss_pred CcCCCccCcEEEEEEEeCC
Q 016377 161 QFGVPYSRPRYFCLAKRKP 179 (390)
Q Consensus 161 ~~G~pq~R~R~~~i~~~~~ 179 (390)
|...+++..+..
T Consensus 185 -------~p~~~l~~~~~~ 196 (203)
T 3h2b_A 185 -------FPHAYLTAEASL 196 (203)
T ss_dssp -------SSEEEEEEEECC
T ss_pred -------Ccchhhhhhhhh
Confidence 777888777653
No 37
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.64 E-value=0.00044 Score=61.88 Aligned_cols=149 Identities=11% Similarity=0.020 Sum_probs=102.1
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEEeC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
..+|||+.||.|.++..+...|. .|.++|+++.+++..+.+.+. .++++|+.++.+.. .+|+++..
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~----~fD~v~~~ 139 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPER---FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTE----LFDLIFDY 139 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTE---EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSS----CEEEEEEE
T ss_pred CCCEEEeCCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCC----CeeEEEEC
Confidence 35999999999999999987775 489999999999999998865 24678888865332 49999976
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccC-h----HHHHHHHHHHHhCCceeEEEEeCC
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET-S----DTHAKMIEILANSDYLTQEFILSP 159 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~-~----~~~~~~~~~l~~~GY~~~~~~l~a 159 (390)
.....++ .+....++.++.++++. .-.+++++....-.. . .....+.+.|++.|+.+.......
T Consensus 140 ~~l~~~~--------~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 208 (235)
T 3lcc_A 140 VFFCAIE--------PEMRPAWAKSMYELLKP---DGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEENP 208 (235)
T ss_dssp SSTTTSC--------GGGHHHHHHHHHHHEEE---EEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEECT
T ss_pred hhhhcCC--------HHHHHHHHHHHHHHCCC---CcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEecC
Confidence 4433221 12344566667776654 345555554322111 1 135788888999999988777667
Q ss_pred CCcCCCccCcEEEEEEEeC
Q 016377 160 LQFGVPYSRPRYFCLAKRK 178 (390)
Q Consensus 160 ~~~G~pq~R~R~~~i~~~~ 178 (390)
......+.++++......+
T Consensus 209 ~~~~~~~g~e~~~~~~~~~ 227 (235)
T 3lcc_A 209 HAIPTRKGKEKLGRWKKIN 227 (235)
T ss_dssp TCCTTTTTSCEEEEEEESC
T ss_pred CccccccCHHHHhhhhhcc
Confidence 6776667777776655443
No 38
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.61 E-value=0.0001 Score=64.35 Aligned_cols=113 Identities=15% Similarity=0.198 Sum_probs=77.6
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhhcccCccEEEeCCCCch
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSPPCQP 89 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~ 89 (390)
..-+|+|++||.|.++..+...|.. .+.++|+++.+++..+.|... .++++|+.++. + .+|+++..||-..
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~-----~-~~D~v~~~~p~~~ 122 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAE--SVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS-----G-KYDTWIMNPPFGS 122 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBS--EEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC-----C-CEEEEEECCCC--
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC-----C-CeeEEEECCCchh
Confidence 4468999999999999999988865 799999999999999999863 45778888763 2 4999999999765
Q ss_pred hhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCcee
Q 016377 90 YTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLT 152 (390)
Q Consensus 90 fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~ 152 (390)
++. + ....++.++++.+. .++++-|. .....+.+.+.+.| .+
T Consensus 123 ~~~-----~---~~~~~l~~~~~~~g------~~~~~~~~------~~~~~~~~~~~~~g-~~ 164 (200)
T 1ne2_A 123 VVK-----H---SDRAFIDKAFETSM------WIYSIGNA------KARDFLRREFSARG-DV 164 (200)
T ss_dssp -------------CHHHHHHHHHHEE------EEEEEEEG------GGHHHHHHHHHHHE-EE
T ss_pred ccC-----c---hhHHHHHHHHHhcC------cEEEEEcC------chHHHHHHHHHHCC-CE
Confidence 542 1 11234555555541 14444443 23556677777777 44
No 39
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.60 E-value=0.0024 Score=56.19 Aligned_cols=129 Identities=15% Similarity=0.200 Sum_probs=87.7
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-C-CCeecCccccchhhhcccCccEEEeCCCCc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-H-RPYQGNIQNLTAAELDMYGAHAWLLSPPCQ 88 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-~-~~~~~di~~~~~~~~~~~~~D~l~~g~PCq 88 (390)
...+|||+-||.|.++..+...|. .+.++|+++.+++..+.+.+ . ..+.+|+.++... ..+|+++......
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~----~~fD~v~~~~~l~ 117 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGR---TVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP----TSIDTIVSTYAFH 117 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTC---EEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC----SCCSEEEEESCGG
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCC---eEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC----CCeEEEEECcchh
Confidence 456999999999999999999875 48999999999999999987 2 4577899887543 2599999764422
Q ss_pred hhhhccCCCCCCCh-hhhhHHHHHHhcccccCCCcEEEEeccccccCh------------------H-------HHHHHH
Q 016377 89 PYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVVGFETS------------------D-------THAKMI 142 (390)
Q Consensus 89 ~fS~~g~~~~~~d~-r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~------------------~-------~~~~~~ 142 (390)
-+ .+. +..++.++.++++. .-.+++.+....-... . ..+.+.
T Consensus 118 ~~---------~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (220)
T 3hnr_A 118 HL---------TDDEKNVAIAKYSQLLNK---GGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQ 185 (220)
T ss_dssp GS---------CHHHHHHHHHHHHHHSCT---TCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHH
T ss_pred cC---------ChHHHHHHHHHHHHhcCC---CCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHH
Confidence 21 222 12355566665543 3355555432211000 0 126778
Q ss_pred HHHHhCCceeEEEEeC
Q 016377 143 EILANSDYLTQEFILS 158 (390)
Q Consensus 143 ~~l~~~GY~~~~~~l~ 158 (390)
+.|++.|+.+.....+
T Consensus 186 ~~l~~aGf~v~~~~~~ 201 (220)
T 3hnr_A 186 TIFENNGFHVTFTRLN 201 (220)
T ss_dssp HHHHHTTEEEEEEECS
T ss_pred HHHHHCCCEEEEeecc
Confidence 8899999988877765
No 40
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.57 E-value=0.00064 Score=59.64 Aligned_cols=128 Identities=12% Similarity=-0.024 Sum_probs=86.9
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCCCchh
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPPCQPY 90 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~f 90 (390)
..-+|||+.||.|.++.-+...|. .+.++|+++.+++..+.+.....+.+|+.++. ....+|+++.......+
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~----~~~~fD~v~~~~~l~~~ 115 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGF---DVDATDGSPELAAEASRRLGRPVRTMLFHQLD----AIDAYDAVWAHACLLHV 115 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHTSCCEECCGGGCC----CCSCEEEEEECSCGGGS
T ss_pred CCCcEEEECCCCCHHHHHHHHcCC---eEEEECCCHHHHHHHHHhcCCceEEeeeccCC----CCCcEEEEEecCchhhc
Confidence 456999999999999999999886 48899999999999999987678889998876 22259999976543222
Q ss_pred hhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccc---------cChHHHHHHHHHHHhCC-ceeEEEE
Q 016377 91 TRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---------ETSDTHAKMIEILANSD-YLTQEFI 156 (390)
Q Consensus 91 S~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~---------~~~~~~~~~~~~l~~~G-Y~~~~~~ 156 (390)
+ .++...++.++.++++. .-.+++......- ......+.+.+.|++.| +.+....
T Consensus 116 ~--------~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~ 180 (211)
T 3e23_A 116 P--------RDELADVLKLIWRALKP---GGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVE 180 (211)
T ss_dssp C--------HHHHHHHHHHHHHHEEE---EEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEE
T ss_pred C--------HHHHHHHHHHHHHhcCC---CcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEE
Confidence 1 12334556666666553 2233333221110 00013678888999999 9875543
No 41
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.57 E-value=0.0008 Score=61.61 Aligned_cols=79 Identities=13% Similarity=0.174 Sum_probs=59.2
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC----------CCeecCccccchh----hhccc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH----------RPYQGNIQNLTAA----ELDMY 76 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~----------~~~~~di~~~~~~----~~~~~ 76 (390)
..-+|||++||.|.+++.+...+- ...+.++|+++.+++.-+.|... .++++|+.++... .+...
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred CCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 456899999999999998887652 12699999999999999999754 2467898887432 13333
Q ss_pred CccEEEeCCCCchh
Q 016377 77 GAHAWLLSPPCQPY 90 (390)
Q Consensus 77 ~~D~l~~g~PCq~f 90 (390)
.+|+++..||.-..
T Consensus 115 ~fD~Vv~nPPy~~~ 128 (260)
T 2ozv_A 115 HFHHVIMNPPYNDA 128 (260)
T ss_dssp CEEEEEECCCC---
T ss_pred CcCEEEECCCCcCC
Confidence 69999999997655
No 42
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.56 E-value=0.00011 Score=77.19 Aligned_cols=76 Identities=13% Similarity=0.091 Sum_probs=59.2
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC------C--CCeecCccccchhhhcccCccEEEe
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG------H--RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~------~--~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
.-+|||||||.|++++.+...|.. .|.++|+++.+++.-+.|.. . .++++|+.++... ....+|+++.
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga~--~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~--~~~~fD~Ii~ 615 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGAR--STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE--ANEQFDLIFI 615 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHH--CCCCEEEEEE
T ss_pred CCcEEEeeechhHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHh--cCCCccEEEE
Confidence 458999999999999999988865 89999999999999998852 1 3467888775332 1225999999
Q ss_pred CCCCchhh
Q 016377 84 SPPCQPYT 91 (390)
Q Consensus 84 g~PCq~fS 91 (390)
.|||-.-|
T Consensus 616 DPP~f~~~ 623 (703)
T 3v97_A 616 DPPTFSNS 623 (703)
T ss_dssp CCCSBC--
T ss_pred CCccccCC
Confidence 99995444
No 43
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.54 E-value=0.00012 Score=67.67 Aligned_cols=83 Identities=16% Similarity=0.205 Sum_probs=57.5
Q ss_pred CCceEEeeecCchhHHHHHHh--cCCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchhhh-cccCccEE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMK--ADVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAAEL-DMYGAHAW 81 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~--aG~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~~~-~~~~~D~l 81 (390)
..-+|||++||.|+.+..+.. .|.. .|+|+|+++.+++..+.|.. . .++++|+.++..... ....+|++
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~--~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKG--TIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCC--EEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 456899999999999988876 3433 79999999999999988852 1 346678877643210 12259999
Q ss_pred EeCCCCchhhhccC
Q 016377 82 LLSPPCQPYTRQGL 95 (390)
Q Consensus 82 ~~g~PCq~fS~~g~ 95 (390)
+..+||.++....+
T Consensus 161 l~d~Pcs~~g~~~~ 174 (274)
T 3ajd_A 161 LLDAPCSGNIIKDK 174 (274)
T ss_dssp EEEECCC-------
T ss_pred EEcCCCCCCccccc
Confidence 99999998776554
No 44
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=97.53 E-value=0.0001 Score=71.69 Aligned_cols=133 Identities=18% Similarity=0.131 Sum_probs=79.6
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchhhh-cccCccEEEeC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAAEL-DMYGAHAWLLS 84 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~~~-~~~~~D~l~~g 84 (390)
.-+|||+|||.|++++.+... .. .|.++|+++.+++..+.|.. + .++++|+.++..... ....+|+++..
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~-~~--~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG-FR--EVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH-EE--EEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeeeccCHHHHHHHHh-CC--EEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 458999999999999999887 33 79999999999999888853 1 346788877643211 12259999999
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHH-HHHHHHHhCCcee
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA-KMIEILANSDYLT 152 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~-~~~~~l~~~GY~~ 152 (390)
||+-..|...... .......++....++++. .-.+++..|...+ ....|. .+.+.+.+.|..+
T Consensus 287 pP~~~~~~~~~~~-~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~-~~~~~~~~i~~~~~~~g~~~ 350 (382)
T 1wxx_A 287 PPAFAKGKKDVER-AYRAYKEVNLRAIKLLKE---GGILATASCSHHM-TEPLFYAMVAEAAQDAHRLL 350 (382)
T ss_dssp CCCSCCSTTSHHH-HHHHHHHHHHHHHHTEEE---EEEEEEEECCTTS-CHHHHHHHHHHHHHHTTCCE
T ss_pred CCCCCCChhHHHH-HHHHHHHHHHHHHHhcCC---CCEEEEEECCCCC-CHHHHHHHHHHHHHHcCCeE
Confidence 9974443211000 000111233333333332 2235555555444 444344 4445677777544
No 45
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=97.52 E-value=0.00068 Score=66.95 Aligned_cols=121 Identities=19% Similarity=0.224 Sum_probs=80.9
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC------CCeecCccccchh-hhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH------RPYQGNIQNLTAA-ELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~------~~~~~di~~~~~~-~~~~~~~D~l~~ 83 (390)
..-+|+||+||.|.+++.+...+. .|.++|+++.+++.-+.|... ..+.+|+.+.... .+....+|+++.
T Consensus 286 ~~~~VLDlgcG~G~~~~~la~~~~---~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~ 362 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLATQAA---SVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLL 362 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEE
T ss_pred CCCEEEECCCCCCHHHHHHHhhCC---EEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEE
Confidence 345899999999999999998753 699999999999998888621 3467888774321 233335999999
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEE-EeccccccChHHHHHHHHHHHhCCceeEE-EEeC
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF-VENVVGFETSDTHAKMIEILANSDYLTQE-FILS 158 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~-~ENV~~~~~~~~~~~~~~~l~~~GY~~~~-~~l~ 158 (390)
.||..+ .. ++++.+..+ +|.-++ +.. +..++..-...|.+.||.+.. ..+|
T Consensus 363 dPPr~g---------~~--------~~~~~l~~~--~p~~ivyvsc-----~p~tlard~~~l~~~Gy~~~~~~~~d 415 (433)
T 1uwv_A 363 DPARAG---------AA--------GVMQQIIKL--EPIRIVYVSC-----NPATLARDSEALLKAGYTIARLAMLD 415 (433)
T ss_dssp CCCTTC---------CH--------HHHHHHHHH--CCSEEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred CCCCcc---------HH--------HHHHHHHhc--CCCeEEEEEC-----ChHHHHhhHHHHHHCCcEEEEEEEec
Confidence 999432 11 233333345 565544 222 223455556778888999877 3443
No 46
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.45 E-value=0.00049 Score=61.42 Aligned_cols=137 Identities=12% Similarity=0.141 Sum_probs=94.7
Q ss_pred CCCCceEEeeecCchhHHHHHHhc--CCCccEEEEEcccHHHHHHHHHhcCC----CCeecCccccchhhhcccCccEEE
Q 016377 9 DGEAWRVLEFYSGIGGMRYSLMKA--DVSAQVVEAFDINDKANDVYELNFGH----RPYQGNIQNLTAAELDMYGAHAWL 82 (390)
Q Consensus 9 ~~~~~~~~dlF~G~Gg~~~g~~~a--G~~~~~v~a~e~~~~a~~~~~~n~~~----~~~~~di~~~~~~~~~~~~~D~l~ 82 (390)
.....+|||+.||.|.++..+... +. .+.++|+++.+++..+.+.+. ..+++|+.++... ..+|+++
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~----~~fD~v~ 114 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEA---TFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE----EKYDMVV 114 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC----SCEEEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCC---eEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC----CCceEEE
Confidence 456689999999999999999987 43 589999999999999999864 3467888887543 2599999
Q ss_pred eCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccCh---------------------------
Q 016377 83 LSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS--------------------------- 135 (390)
Q Consensus 83 ~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~--------------------------- 135 (390)
.......++ +..+..++.++.++++- .-.+++.+.+..-...
T Consensus 115 ~~~~l~~~~--------~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (234)
T 3dtn_A 115 SALSIHHLE--------DEDKKELYKRSYSILKE---SGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGY 183 (234)
T ss_dssp EESCGGGSC--------HHHHHHHHHHHHHHEEE---EEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC
T ss_pred EeCccccCC--------HHHHHHHHHHHHHhcCC---CcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 876533221 11233466677776654 3566666655432110
Q ss_pred --------HHHHHHHHHHHhCCceeEEEEeCCCCcC
Q 016377 136 --------DTHAKMIEILANSDYLTQEFILSPLQFG 163 (390)
Q Consensus 136 --------~~~~~~~~~l~~~GY~~~~~~l~a~~~G 163 (390)
...+.+.+.|++.|+...........||
T Consensus 184 ~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~~ 219 (234)
T 3dtn_A 184 ERSKLDKDIEMNQQLNWLKEAGFRDVSCIYKYYQFA 219 (234)
T ss_dssp ----CCCCCBHHHHHHHHHHTTCEEEEEEEEETTEE
T ss_pred HhcccccccCHHHHHHHHHHcCCCceeeeeeeccee
Confidence 0125667789999998877766666664
No 47
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=97.44 E-value=0.00065 Score=65.71 Aligned_cols=126 Identities=14% Similarity=0.137 Sum_probs=83.1
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
..-+++|++||.|++..-+...|. +..++++|+++.+++.-+.|... .++++|+.++... ...+|+++.
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~---~~~fD~Ii~ 292 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQY---VDSVDFAIS 292 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGT---CSCEEEEEE
T ss_pred CCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcc---cCCcCEEEE
Confidence 456899999999999999988875 12499999999999999988631 3467888887532 225999999
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEEE
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEF 155 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~ 155 (390)
.||. |.+.+..+....++..+++.+..+ ..+..+++-. + ...+.+.+.+.||.+...
T Consensus 293 npPy------g~r~~~~~~~~~ly~~~~~~l~r~-l~g~~~~i~~-----~---~~~~~~~~~~~G~~~~~~ 349 (373)
T 3tm4_A 293 NLPY------GLKIGKKSMIPDLYMKFFNELAKV-LEKRGVFITT-----E---KKAIEEAIAENGFEIIHH 349 (373)
T ss_dssp ECCC------C------CCHHHHHHHHHHHHHHH-EEEEEEEEES-----C---HHHHHHHHHHTTEEEEEE
T ss_pred CCCC------CcccCcchhHHHHHHHHHHHHHHH-cCCeEEEEEC-----C---HHHHHHHHHHcCCEEEEE
Confidence 9994 322222233345566666655553 1345555532 1 334445678889887543
No 48
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.38 E-value=0.0014 Score=57.86 Aligned_cols=129 Identities=10% Similarity=-0.025 Sum_probs=82.0
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchhhhcccCccEEEeCC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
.-+|||+.||.|.++..+....-. ..+.++|+++.+++..+.|.. . .++++|+.++.. .+....+|+++..+
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~-~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPD-INYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTD-YFEDGEIDRLYLNF 119 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGG-TSCTTCCSEEEEES
T ss_pred CCeEEEEccCcCHHHHHHHHHCCC-CCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHh-hcCCCCCCEEEEEC
Confidence 458999999999999988876421 259999999999998888752 2 356789887532 23333599999987
Q ss_pred CCchhhhccCCCCCCChh----hhhHHHHHHhcccccCCC-cEEEEeccccccChHHHHHHHHHHHhCCceeEEEEe
Q 016377 86 PCQPYTRQGLQKQSSDAR----AFSFLKILELIPHTVKPP-HMLFVENVVGFETSDTHAKMIEILANSDYLTQEFIL 157 (390)
Q Consensus 86 PCq~fS~~g~~~~~~d~r----~~l~~~~~~~i~~~~~~P-~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l 157 (390)
|...... .+..+ ..++.++.+++ +| -+++++-- ....+..+++.|.+.||.+.....
T Consensus 120 ~~~~~~~------~~~~~~~~~~~~l~~~~~~L-----kpgG~l~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~ 181 (214)
T 1yzh_A 120 SDPWPKK------RHEKRRLTYKTFLDTFKRIL-----PENGEIHFKTD----NRGLFEYSLVSFSQYGMKLNGVWL 181 (214)
T ss_dssp CCCCCSG------GGGGGSTTSHHHHHHHHHHS-----CTTCEEEEEES----CHHHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCcccc------chhhhccCCHHHHHHHHHHc-----CCCcEEEEEeC----CHHHHHHHHHHHHHCCCeeeeccc
Confidence 7432211 11112 23344444433 34 34555421 123467788889999988755443
No 49
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.37 E-value=0.00042 Score=66.45 Aligned_cols=105 Identities=18% Similarity=0.204 Sum_probs=69.1
Q ss_pred CCceEEeeecCchhHHHHHHhcC-CCccEEEEEcccHHHHHHHHHhcCC------CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKAD-VSAQVVEAFDINDKANDVYELNFGH------RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG-~~~~~v~a~e~~~~a~~~~~~n~~~------~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
..-+++|+|||.|.+..-+...+ -. ..++++|+++.+++.-+.|... .++++|+.++.... . .+|+++.
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~-~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~-~--~~D~Ii~ 278 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPT-SPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFF-P--EVDRILA 278 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTT-SCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTC-C--CCSEEEE
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCC-ceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcccc-C--CCCEEEE
Confidence 45689999999999998888754 11 1489999999999999998642 34678888875321 2 3799999
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCC--cEEEE
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPP--HMLFV 126 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P--~~~~~ 126 (390)
.||| |.+.+.......++..+++.+..+ .+| .++++
T Consensus 279 npPy------g~r~~~~~~~~~~~~~~~~~~~~~-LkpgG~l~i~ 316 (354)
T 3tma_A 279 NPPH------GLRLGRKEGLFHLYWDFLRGALAL-LPPGGRVALL 316 (354)
T ss_dssp CCCS------CC----CHHHHHHHHHHHHHHHHT-SCTTCEEEEE
T ss_pred CCCC------cCccCCcccHHHHHHHHHHHHHHh-cCCCcEEEEE
Confidence 9998 322222223344556666555443 256 44444
No 50
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.37 E-value=0.0032 Score=54.88 Aligned_cols=122 Identities=11% Similarity=0.057 Sum_probs=81.3
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
..-+|+|+.||.|.++..+...+- ...+.++|+++.+++..+.|.. . .++.+|+.+.... .. .+|+++.+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~--~~D~i~~~ 115 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDD-LP--DPDRVFIG 115 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTT-SC--CCSEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhc-CC--CCCEEEEC
Confidence 456899999999999999998862 1269999999999999888763 1 3467787654322 22 49999987
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEEEEe
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFIL 157 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l 157 (390)
.+.. ....++.++.++++. . -.+++... .......+.+.|++.||.+....+
T Consensus 116 ~~~~-------------~~~~~l~~~~~~Lkp---g-G~l~~~~~----~~~~~~~~~~~l~~~g~~~~~~~~ 167 (204)
T 3e05_A 116 GSGG-------------MLEEIIDAVDRRLKS---E-GVIVLNAV----TLDTLTKAVEFLEDHGYMVEVACV 167 (204)
T ss_dssp CCTT-------------CHHHHHHHHHHHCCT---T-CEEEEEEC----BHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCc-------------CHHHHHHHHHHhcCC---C-eEEEEEec----ccccHHHHHHHHHHCCCceeEEEE
Confidence 6542 223445555555443 2 33444322 123577888999999986554443
No 51
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=97.36 E-value=0.0012 Score=59.58 Aligned_cols=91 Identities=12% Similarity=0.011 Sum_probs=67.3
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC---CCeecCccccchhhhcccCccEEEeCCCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH---RPYQGNIQNLTAAELDMYGAHAWLLSPPC 87 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~---~~~~~di~~~~~~~~~~~~~D~l~~g~PC 87 (390)
...+|||+-||.|.++..+...|.. .+.++|+++.+++..+.+... ..+++|+.++. +....+|+++.....
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l 118 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIA---IEPDAYNVVLSSLAL 118 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCC---CCTTCEEEEEEESCG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCC---CCCCCeEEEEEchhh
Confidence 5679999999999999999999975 799999999999999988763 34678888764 333359999986543
Q ss_pred chhhhccCCCCCCChhhhhHHHHHHhccc
Q 016377 88 QPYTRQGLQKQSSDARAFSFLKILELIPH 116 (390)
Q Consensus 88 q~fS~~g~~~~~~d~r~~l~~~~~~~i~~ 116 (390)
..+ .+ ...++.++.++++.
T Consensus 119 ~~~---------~~-~~~~l~~~~~~Lkp 137 (253)
T 3g5l_A 119 HYI---------AS-FDDICKKVYINLKS 137 (253)
T ss_dssp GGC---------SC-HHHHHHHHHHHEEE
T ss_pred hhh---------hh-HHHHHHHHHHHcCC
Confidence 222 22 23456666665553
No 52
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=97.35 E-value=0.002 Score=57.00 Aligned_cols=152 Identities=14% Similarity=0.137 Sum_probs=94.5
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----------CCeecCccccchhhhcccCcc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----------RPYQGNIQNLTAAELDMYGAH 79 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----------~~~~~di~~~~~~~~~~~~~D 79 (390)
...+|||+.||.|.++..+...|. .+.++|+++.+++..+.+... ..+.+|+.++. +....+|
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~D 103 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY---SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS---FHDSSFD 103 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC---SCTTCEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC---CCCCcee
Confidence 456899999999999999999976 489999999999999998764 23466777653 2233599
Q ss_pred EEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccC-------------------------
Q 016377 80 AWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET------------------------- 134 (390)
Q Consensus 80 ~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~------------------------- 134 (390)
+++.......+.. .+.+..++.++.++++. .-.+++.+-......
T Consensus 104 ~v~~~~~l~~~~~-------~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (235)
T 3sm3_A 104 FAVMQAFLTSVPD-------PKERSRIIKEVFRVLKP---GAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDP 173 (235)
T ss_dssp EEEEESCGGGCCC-------HHHHHHHHHHHHHHEEE---EEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECT
T ss_pred EEEEcchhhcCCC-------HHHHHHHHHHHHHHcCC---CeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEeccc
Confidence 9997644332210 01122455566665543 234555443221110
Q ss_pred ----------hHHHHHHHHHHHhCCceeEEEEeCCCCcCCCccCcEEEEEEEeC
Q 016377 135 ----------SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 178 (390)
Q Consensus 135 ----------~~~~~~~~~~l~~~GY~~~~~~l~a~~~G~pq~R~R~~~i~~~~ 178 (390)
....+.+.+.|++.|+.+....-......-...-.-+|+.+.+.
T Consensus 174 ~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~g~~~~~~~i~~~~~ 227 (235)
T 3sm3_A 174 ETGETEFIAHHFTEKELVFLLTDCRFEIDYFRVKELETRTGNKILGFVIIAQKL 227 (235)
T ss_dssp TTCCEEEEEECBCHHHHHHHHHTTTEEEEEEEEEEEECTTSCEEEEEEEEEEEC
T ss_pred ccCCcceeeEeCCHHHHHHHHHHcCCEEEEEEecceeeccCCccceEEEeeHHH
Confidence 01356788899999998876544333333333444555555444
No 53
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.33 E-value=0.0002 Score=61.08 Aligned_cols=73 Identities=21% Similarity=0.281 Sum_probs=56.9
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
..-+|+|++||.|.++..+...|.. .|.++|+++.+++..+.|... .++.+|+.+..+. ..+ .+|+++.
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~-~fD~i~~ 106 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGMS--AAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDC-LTG-RFDLVFL 106 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTCC--EEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHH-BCS-CEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHh-hcC-CCCEEEE
Confidence 4568999999999999999988755 799999999999999888742 2456777764221 222 4999999
Q ss_pred CCCC
Q 016377 84 SPPC 87 (390)
Q Consensus 84 g~PC 87 (390)
.+|.
T Consensus 107 ~~~~ 110 (177)
T 2esr_A 107 DPPY 110 (177)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 9885
No 54
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.33 E-value=0.00025 Score=66.89 Aligned_cols=84 Identities=14% Similarity=0.160 Sum_probs=59.3
Q ss_pred CCCceEEeeecCchhHHHHHHhc--CCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchhhhcccCccEE
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKA--DVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAAELDMYGAHAW 81 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~a--G~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~~~~~~~~D~l 81 (390)
...-+|||+|||.||.++-+... +-. .|+|+|+++.+++..+.|.. . .++.+|..++....-....+|.+
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g--~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~V 178 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQG--KIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYI 178 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEE
Confidence 34568999999999999988763 222 79999999999999998863 1 34678888775431111149999
Q ss_pred EeCCCCchhhhccC
Q 016377 82 LLSPPCQPYTRQGL 95 (390)
Q Consensus 82 ~~g~PCq~fS~~g~ 95 (390)
+.-+||.+.-...+
T Consensus 179 l~D~PcSg~G~~~r 192 (309)
T 2b9e_A 179 LLDPSCSGSGMPSR 192 (309)
T ss_dssp EECCCCCC------
T ss_pred EEcCCcCCCCCCcc
Confidence 99999998766544
No 55
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.32 E-value=0.002 Score=55.70 Aligned_cols=73 Identities=21% Similarity=0.100 Sum_probs=55.6
Q ss_pred CCceEEeeecCchhHHHHHHhc-C-CCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-D-VSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAW 81 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G-~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l 81 (390)
..-+|||+.||.|.++..+.+. | -. .+.++|+++.+++.-+.|... .++++|+.++.. .....+|++
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~~fD~v 97 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENG--RVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDK--YIDCPVKAV 97 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTC--EEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGG--TCCSCEEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhh--hccCCceEE
Confidence 3469999999999999988875 2 22 699999999999988888532 356788877643 122359999
Q ss_pred EeCCCC
Q 016377 82 LLSPPC 87 (390)
Q Consensus 82 ~~g~PC 87 (390)
+..+|-
T Consensus 98 ~~~~~~ 103 (197)
T 3eey_A 98 MFNLGY 103 (197)
T ss_dssp EEEESB
T ss_pred EEcCCc
Confidence 988775
No 56
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.31 E-value=0.00033 Score=61.27 Aligned_cols=117 Identities=15% Similarity=0.078 Sum_probs=78.9
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC------CCeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH------RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~------~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
...+|||+.||.|.++..+...|.. .+.++|+++.+++..+.|... .++.+|+.+.. . ..+|+++..
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~-~~fD~i~~~ 132 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLGAK--SVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV----D-GKFDLIVAN 132 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC----C-SCEEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC----C-CCceEEEEC
Confidence 4568999999999999999998865 799999999999888887542 34567776542 2 259999988
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCC--cEEEEeccccccChHHHHHHHHHHHhCCceeEEEEe
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPP--HMLFVENVVGFETSDTHAKMIEILANSDYLTQEFIL 157 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P--~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l 157 (390)
+|... +..+++-+..+ .+| .+++.+.... ....+.+.+++.||.+....-
T Consensus 133 ~~~~~-----------------~~~~l~~~~~~-L~~gG~l~~~~~~~~-----~~~~~~~~~~~~Gf~~~~~~~ 184 (205)
T 3grz_A 133 ILAEI-----------------LLDLIPQLDSH-LNEDGQVIFSGIDYL-----QLPKIEQALAENSFQIDLKMR 184 (205)
T ss_dssp SCHHH-----------------HHHHGGGSGGG-EEEEEEEEEEEEEGG-----GHHHHHHHHHHTTEEEEEEEE
T ss_pred CcHHH-----------------HHHHHHHHHHh-cCCCCEEEEEecCcc-----cHHHHHHHHHHcCCceEEeec
Confidence 76422 22333322222 145 3333333322 367788889999998766443
No 57
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.30 E-value=0.00058 Score=64.49 Aligned_cols=82 Identities=18% Similarity=0.231 Sum_probs=61.5
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
..-+|||++||.|+.+.-+.+..-..-.|.|+|+++.+++..+.|.. . .++++|+.++.. ..+ .+|+++..
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~--~~~-~fD~Il~d 194 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE--LNV-EFDKILLD 194 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG--GCC-CEEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc--ccc-cCCEEEEe
Confidence 45689999999999999988742111269999999999999888862 2 346788887653 222 59999999
Q ss_pred CCCchhhhccC
Q 016377 85 PPCQPYTRQGL 95 (390)
Q Consensus 85 ~PCq~fS~~g~ 95 (390)
+||.+.....+
T Consensus 195 ~Pcsg~g~~~~ 205 (315)
T 1ixk_A 195 APCTGSGTIHK 205 (315)
T ss_dssp CCTTSTTTCC-
T ss_pred CCCCCcccccC
Confidence 99988766543
No 58
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.29 E-value=0.0031 Score=60.83 Aligned_cols=126 Identities=10% Similarity=0.069 Sum_probs=82.2
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC------CCeecCccc-cchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH------RPYQGNIQN-LTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~------~~~~~di~~-~~~~~~~~~~~D~l~~ 83 (390)
..-+|+|++ |.|.++..+...|.. ..|.++|+++.+++.-+.|... .++++|+.+ +.. ...+ .+|+++.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~-~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~-~~~~-~fD~Vi~ 247 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLP-KRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPD-YALH-KFDTFIT 247 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCC-SEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCT-TTSS-CBSEEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchh-hccC-CccEEEE
Confidence 356899999 999999999988751 2799999999999998888631 346789887 432 1222 5999999
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCC--cEEEEeccccccChHHHHHHHHHHH-hCCceeEEEE
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPP--HMLFVENVVGFETSDTHAKMIEILA-NSDYLTQEFI 156 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P--~~~~~ENV~~~~~~~~~~~~~~~l~-~~GY~~~~~~ 156 (390)
.|||.... ...++.+..+ .+ +| .+++++-...-.+...+..+.+.+. +.|+.+....
T Consensus 248 ~~p~~~~~-----------~~~~l~~~~~---~L--kpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 307 (373)
T 2qm3_A 248 DPPETLEA-----------IRAFVGRGIA---TL--KGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVITDII 307 (373)
T ss_dssp CCCSSHHH-----------HHHHHHHHHH---TB--CSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred CCCCchHH-----------HHHHHHHHHH---Hc--ccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcchhhhh
Confidence 99986531 1223333334 34 44 3556665431112222355666677 8888765443
No 59
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=97.28 E-value=0.002 Score=57.74 Aligned_cols=129 Identities=12% Similarity=0.039 Sum_probs=87.6
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCC------CeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR------PYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~------~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
...+|||+.||.|.++..+...+.. .+.++|+++.+++..+.+.... .+.+|+.++.. ....+|+++..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~---~~~~fD~v~~~ 153 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFR--EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTP---EPDSYDVIWIQ 153 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCS--EEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCC---CSSCEEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCC--EEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCC---CCCCEEEEEEc
Confidence 4679999999999999998888754 7999999999999999887642 46778777643 22259999866
Q ss_pred CCCchhhhccCCCCCCCh-hhhhHHHHHHhcccccCCCcEEEEeccccc------cCh---HHHHHHHHHHHhCCceeEE
Q 016377 85 PPCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVVGF------ETS---DTHAKMIEILANSDYLTQE 154 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~-r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~------~~~---~~~~~~~~~l~~~GY~~~~ 154 (390)
..-.. ..++ ...++.++.++++. .-.+++.+++..- ... ...+.+.+.|++.|+.+..
T Consensus 154 ~~l~~---------~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 221 (241)
T 2ex4_A 154 WVIGH---------LTDQHLAEFLRRCKGSLRP---NGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLA 221 (241)
T ss_dssp SCGGG---------SCHHHHHHHHHHHHHHEEE---EEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEE
T ss_pred chhhh---------CCHHHHHHHHHHHHHhcCC---CeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEE
Confidence 32111 1221 23456666665554 3466676765431 000 1367888899999998765
Q ss_pred EE
Q 016377 155 FI 156 (390)
Q Consensus 155 ~~ 156 (390)
..
T Consensus 222 ~~ 223 (241)
T 2ex4_A 222 EE 223 (241)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 60
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.28 E-value=0.00032 Score=64.85 Aligned_cols=68 Identities=19% Similarity=0.217 Sum_probs=59.0
Q ss_pred eEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC---CCeecCccccchhhhcccCccEEEeCCC
Q 016377 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH---RPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 14 ~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~---~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
+|+|+-||.|.++..+.+.|. .|.|+|+|+..++..+.+++. .++++|+.+++..++. ..|.+++.+|
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~~---~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~--~~~~iv~NlP 119 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAGA---EVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVP--QGSLLVANLP 119 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTTC---CEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSC--TTEEEEEEEC
T ss_pred eEEEEeCchHHHHHHHHHcCC---EEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhcc--CccEEEecCc
Confidence 899999999999999999984 499999999999999999875 4678999998765443 3899999998
No 61
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=97.25 E-value=0.0015 Score=62.35 Aligned_cols=145 Identities=11% Similarity=0.035 Sum_probs=85.1
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCc----cEEEEEcccHHHHHHHHHhcC-----CCCeecCccccchhhhcccCccE
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSA----QVVEAFDINDKANDVYELNFG-----HRPYQGNIQNLTAAELDMYGAHA 80 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~----~~v~a~e~~~~a~~~~~~n~~-----~~~~~~di~~~~~~~~~~~~~D~ 80 (390)
....+|+|++||.|++...+.+..-+. ..++++|+++.+++.-+.|.. ..++++|..+.. ....+|+
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~----~~~~fD~ 204 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANL----LVDPVDV 204 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCC----CCCCEEE
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCcc----ccCCccE
Confidence 356899999999999999887654211 369999999999999888742 245667765432 1225999
Q ss_pred EEeCCCCchhhhcc---C-----CCCCCChhhhhHHHHHHhcccccCCCc-EEEEeccccccChHHHHHHHHHHHhCCce
Q 016377 81 WLLSPPCQPYTRQG---L-----QKQSSDARAFSFLKILELIPHTVKPPH-MLFVENVVGFETSDTHAKMIEILANSDYL 151 (390)
Q Consensus 81 l~~g~PCq~fS~~g---~-----~~~~~d~r~~l~~~~~~~i~~~~~~P~-~~~~ENV~~~~~~~~~~~~~~~l~~~GY~ 151 (390)
+++.||..-++... + ..+..+.....+.+.++. + +|. .+++..-.+++++.....+.+.|.+.||.
T Consensus 205 Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~---L--k~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~~ 279 (344)
T 2f8l_A 205 VISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRY---T--KPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHI 279 (344)
T ss_dssp EEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHT---E--EEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEEE
T ss_pred EEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHH---h--CCCCEEEEEECchhcCCchHHHHHHHHHhCCeE
Confidence 99999963322110 0 001111111223334443 4 342 33333323466655567777888877764
Q ss_pred eEEEEeCCCCcC
Q 016377 152 TQEFILSPLQFG 163 (390)
Q Consensus 152 ~~~~~l~a~~~G 163 (390)
....-+-..-|+
T Consensus 280 ~~ii~lp~~~F~ 291 (344)
T 2f8l_A 280 EGIIKLPETLFK 291 (344)
T ss_dssp EEEEECCGGGSC
T ss_pred EEeeeCChhhcc
Confidence 433334444454
No 62
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.24 E-value=0.0043 Score=57.94 Aligned_cols=150 Identities=9% Similarity=0.002 Sum_probs=89.5
Q ss_pred CceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCC----------CCeecCccccchhhhcccCccE
Q 016377 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH----------RPYQGNIQNLTAAELDMYGAHA 80 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~----------~~~~~di~~~~~~~~~~~~~D~ 80 (390)
.-+|||+.||.|+++..+... +.. .|.++|+|+.+++..+.|++. .++.+|+.+.... ....+|+
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~--~~~~fD~ 166 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVE--KAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRK--FKNEFDV 166 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCS--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG--CSSCEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCC--EEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh--CCCCceE
Confidence 468999999999999998876 544 799999999999998888731 3467787664322 1225999
Q ss_pred EEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCc-EEEEeccccccChHHHHHHHHHHHhCCceeEEEEeCC
Q 016377 81 WLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH-MLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSP 159 (390)
Q Consensus 81 l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~-~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l~a 159 (390)
|+..+|+.... ....+ ....++..+.++ + +|. +++++....+.....+..+++.|.+..-.+......-
T Consensus 167 Ii~d~~~~~~~---~~~~l--~~~~~l~~~~~~---L--kpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~v 236 (296)
T 1inl_A 167 IIIDSTDPTAG---QGGHL--FTEEFYQACYDA---L--KEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFM 236 (296)
T ss_dssp EEEEC-------------C--CSHHHHHHHHHH---E--EEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEEC
T ss_pred EEEcCCCcccC---chhhh--hHHHHHHHHHHh---c--CCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeec
Confidence 99988874222 11111 112233334443 3 454 4555543344455567788888887744444333222
Q ss_pred CCcCCCccCcEEEEEEEeC
Q 016377 160 LQFGVPYSRPRYFCLAKRK 178 (390)
Q Consensus 160 ~~~G~pq~R~R~~~i~~~~ 178 (390)
.-| | .....|++|+++
T Consensus 237 p~~--p-~g~~~f~~as~~ 252 (296)
T 1inl_A 237 TTY--P-SGMWSYTFASKG 252 (296)
T ss_dssp TTS--T-TSEEEEEEEESS
T ss_pred Ccc--C-CCceEEEEecCC
Confidence 222 2 456778888765
No 63
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.21 E-value=0.0057 Score=53.60 Aligned_cols=116 Identities=13% Similarity=0.099 Sum_probs=78.8
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhc-----CC--CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-----GH--RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~-----~~--~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
..-+|+|+.||.|.++.-+...|. .|+++|+++.+++.-+.|. ++ .++.+|+.+.... .. .+|+++.
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~-~~--~~D~v~~ 128 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLAGG---RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALAD-LP--LPEAVFI 128 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTT-SC--CCSEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhccc-CC--CCCEEEE
Confidence 346899999999999999988854 5999999999999888875 31 3567888773221 22 4999986
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEEE
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEF 155 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~ 155 (390)
+.. . +. . ++.++.+.++. --.+++..+ .......+.+.|++.||.+...
T Consensus 129 ~~~------------~-~~-~-~l~~~~~~Lkp----gG~lv~~~~----~~~~~~~~~~~l~~~g~~i~~i 177 (204)
T 3njr_A 129 GGG------------G-SQ-A-LYDRLWEWLAP----GTRIVANAV----TLESETLLTQLHARHGGQLLRI 177 (204)
T ss_dssp CSC------------C-CH-H-HHHHHHHHSCT----TCEEEEEEC----SHHHHHHHHHHHHHHCSEEEEE
T ss_pred CCc------------c-cH-H-HHHHHHHhcCC----CcEEEEEec----CcccHHHHHHHHHhCCCcEEEE
Confidence 541 1 22 2 55555564432 234444433 2346788888999999877554
No 64
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=97.21 E-value=0.0024 Score=57.44 Aligned_cols=147 Identities=11% Similarity=0.038 Sum_probs=96.4
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC----CCeecCccccchhhhcccCccEEEeCCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH----RPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~----~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
...+|||+-||.|.++..+...|.. .+.++|+++.+++..+.+... ..+++|+.++. ++...+|+++....
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~ 167 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYA--TTDLLEPVKHMLEEAKRELAGMPVGKFILASMETAT---LPPNTYDLIVIQWT 167 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCS--EEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCC---CCSSCEEEEEEESC
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcC--EEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCC---CCCCCeEEEEEcch
Confidence 4679999999999999999888854 799999999999999998853 34677887764 33335999997543
Q ss_pred CchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccC----------hHHHHHHHHHHHhCCceeEEEE
Q 016377 87 CQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET----------SDTHAKMIEILANSDYLTQEFI 156 (390)
Q Consensus 87 Cq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~----------~~~~~~~~~~l~~~GY~~~~~~ 156 (390)
-..++ +++...++.++.++++. .-.+++.+|+..-.. ....+.+.+.|++.|+.+....
T Consensus 168 l~~~~--------~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 236 (254)
T 1xtp_A 168 AIYLT--------DADFVKFFKHCQQALTP---NGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEA 236 (254)
T ss_dssp GGGSC--------HHHHHHHHHHHHHHEEE---EEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEE
T ss_pred hhhCC--------HHHHHHHHHHHHHhcCC---CeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEee
Confidence 22111 12234556666666554 346777776432110 0134778888999999876554
Q ss_pred eCCCCcCCCccCcEEEEEEE
Q 016377 157 LSPLQFGVPYSRPRYFCLAK 176 (390)
Q Consensus 157 l~a~~~G~pq~R~R~~~i~~ 176 (390)
... +.|.....+.+++.
T Consensus 237 ~~~---~~~~~~~~~~~~~~ 253 (254)
T 1xtp_A 237 FQE---EWPTDLFPLKMYAL 253 (254)
T ss_dssp ECT---TCCTTSCCEEEEEE
T ss_pred ecC---CCCchhheEEEEEe
Confidence 332 35555555555443
No 65
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.21 E-value=0.00084 Score=58.61 Aligned_cols=138 Identities=17% Similarity=0.102 Sum_probs=70.0
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----CCeecCccccchh-hhcccCccEEEe
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RPYQGNIQNLTAA-ELDMYGAHAWLL 83 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----~~~~~di~~~~~~-~~~~~~~D~l~~ 83 (390)
....+|+|+.||.|.++..+...+-. ..+.++|+++.+++.-+.|... .++++|+.+.... ......+|+++.
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPG-VSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVS 107 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTT-EEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEE
Confidence 56679999999999999999988531 2589999999999998888764 3456677662111 001136999999
Q ss_pred CCCCchhhhccCCCC---CCChh---------hhhHHHHHHhcccccCCCc-E-EEEeccccccChHHHHHHHHHHH--h
Q 016377 84 SPPCQPYTRQGLQKQ---SSDAR---------AFSFLKILELIPHTVKPPH-M-LFVENVVGFETSDTHAKMIEILA--N 147 (390)
Q Consensus 84 g~PCq~fS~~g~~~~---~~d~r---------~~l~~~~~~~i~~~~~~P~-~-~~~ENV~~~~~~~~~~~~~~~l~--~ 147 (390)
.||+-..+....-.. ..++. -..+..+++-+..+ .+|. + ++++-... ....+.+.+. +
T Consensus 108 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-LkpgG~l~~~~~~~~-----~~~~~~~~l~~~~ 181 (215)
T 4dzr_A 108 NPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYV-LARGRAGVFLEVGHN-----QADEVARLFAPWR 181 (215)
T ss_dssp CCCCCC------------------------CTTHHHHHHHTCCGGG-BCSSSEEEEEECTTS-----CHHHHHHHTGGGG
T ss_pred CCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHH-hcCCCeEEEEEECCc-----cHHHHHHHHHHhh
Confidence 999865543321100 00011 11235555544443 1553 3 55554321 2556677778 7
Q ss_pred CCceeEE
Q 016377 148 SDYLTQE 154 (390)
Q Consensus 148 ~GY~~~~ 154 (390)
.||....
T Consensus 182 ~gf~~~~ 188 (215)
T 4dzr_A 182 ERGFRVR 188 (215)
T ss_dssp GGTEECC
T ss_pred cCCceEE
Confidence 8875433
No 66
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.21 E-value=0.00048 Score=68.52 Aligned_cols=84 Identities=20% Similarity=0.127 Sum_probs=62.1
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----CCeecCccccchhhhcccCccEEEeC
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
...-+|||++||.||.++-+...--.--.|+|+|+++.+++..+.|... .++++|..++... +. ..+|+|+.-
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~-~~-~~FD~Il~D 177 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEA-FG-TYFHRVLLD 177 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHH-HC-SCEEEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhh-cc-ccCCEEEEC
Confidence 3456899999999999999886411111699999999999999988632 2356777766421 22 259999999
Q ss_pred CCCchhhhccC
Q 016377 85 PPCQPYTRQGL 95 (390)
Q Consensus 85 ~PCq~fS~~g~ 95 (390)
+||.+.....+
T Consensus 178 ~PcSg~G~~rr 188 (464)
T 3m6w_A 178 APCSGEGMFRK 188 (464)
T ss_dssp CCCCCGGGTTT
T ss_pred CCcCCcccccc
Confidence 99988776654
No 67
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.20 E-value=0.0027 Score=58.39 Aligned_cols=114 Identities=18% Similarity=0.132 Sum_probs=78.2
Q ss_pred CceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEEe
Q 016377 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
.-+|||++||.|.++..+.+. |-. ..+.++|+++.+++..+.|... .++.+|+.+. ++...+|+++.
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~~~D~V~~ 187 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAVGSS-GKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG----FDEKDVDALFL 187 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHTTTT-CEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC----CSCCSEEEEEE
T ss_pred CCEEEEECCcCCHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc----ccCCccCEEEE
Confidence 458999999999999999887 421 2699999999999998888631 2456777765 23235999998
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeE
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQ 153 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~ 153 (390)
.+|+. ..++.++.++++. .-.+++.+.. ......+++.|.+.||...
T Consensus 188 ~~~~~---------------~~~l~~~~~~L~p---gG~l~~~~~~-----~~~~~~~~~~l~~~gf~~~ 234 (277)
T 1o54_A 188 DVPDP---------------WNYIDKCWEALKG---GGRFATVCPT-----TNQVQETLKKLQELPFIRI 234 (277)
T ss_dssp CCSCG---------------GGTHHHHHHHEEE---EEEEEEEESS-----HHHHHHHHHHHHHSSEEEE
T ss_pred CCcCH---------------HHHHHHHHHHcCC---CCEEEEEeCC-----HHHHHHHHHHHHHCCCcee
Confidence 77643 2456666665553 2344444432 1246677888888998643
No 68
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=97.15 E-value=0.0004 Score=68.48 Aligned_cols=69 Identities=25% Similarity=0.369 Sum_probs=56.0
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----CCeecCccccchhhhcccCccEEEeCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
..-+|+|||||.|.+++.+...+. .|.++|+++.+++..+.|... ..+.+|+.++... .+|+++..|
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~~---~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~-----~fD~Vv~dP 361 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRGF---NVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVK-----GFDTVIVDP 361 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCT-----TCSEEEECC
T ss_pred CCCEEEEeeccchHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCcc-----CCCEEEEcC
Confidence 345899999999999999988764 599999999999998888642 3567888876432 499999999
Q ss_pred CC
Q 016377 86 PC 87 (390)
Q Consensus 86 PC 87 (390)
|.
T Consensus 362 Pr 363 (425)
T 2jjq_A 362 PR 363 (425)
T ss_dssp CT
T ss_pred Cc
Confidence 84
No 69
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.14 E-value=0.012 Score=54.24 Aligned_cols=150 Identities=13% Similarity=0.049 Sum_probs=94.2
Q ss_pred CCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcC-------C---CCeecCccccchhhhcccCcc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFG-------H---RPYQGNIQNLTAAELDMYGAH 79 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~-------~---~~~~~di~~~~~~~~~~~~~D 79 (390)
..-+|||+.||.|++..-+... |.. .|.++|+|+.+++..+.|++ + .++.+|..+.-.. . ...+|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~-~~~fD 150 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVK--KATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAK-S-ENQYD 150 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCS--EEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHT-C-CSCEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCc--eEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh-C-CCCee
Confidence 3568999999999999888776 644 89999999999999998873 1 3467787764222 1 22599
Q ss_pred EEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCc-EEEEeccccccChHHHHHHHHHHHhCCceeEEEEeC
Q 016377 80 AWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH-MLFVENVVGFETSDTHAKMIEILANSDYLTQEFILS 158 (390)
Q Consensus 80 ~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~-~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l~ 158 (390)
+|+..+|... +....+. ...++..+.+. + +|. +++++..........+..+.+.|++..-.+......
T Consensus 151 ~Ii~d~~~~~----~~~~~l~--~~~~~~~~~~~---L--~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~ 219 (275)
T 1iy9_A 151 VIMVDSTEPV----GPAVNLF--TKGFYAGIAKA---L--KEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTAN 219 (275)
T ss_dssp EEEESCSSCC----SCCCCCS--TTHHHHHHHHH---E--EEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEEC
T ss_pred EEEECCCCCC----Ccchhhh--HHHHHHHHHHh---c--CCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 9999877521 1111111 12334444443 3 454 444443334445567888889998885455444333
Q ss_pred CCCcCCCccCcEEEEEEEeC
Q 016377 159 PLQFGVPYSRPRYFCLAKRK 178 (390)
Q Consensus 159 a~~~G~pq~R~R~~~i~~~~ 178 (390)
-..| | .....|++|+++
T Consensus 220 vp~~--~-~g~w~~~~ask~ 236 (275)
T 1iy9_A 220 IPTY--P-SGLWTFTIGSKK 236 (275)
T ss_dssp CTTS--G-GGCEEEEEEESS
T ss_pred cCcc--c-CcceEEEEeeCC
Confidence 2222 0 346788888865
No 70
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=97.14 E-value=0.00032 Score=69.62 Aligned_cols=82 Identities=13% Similarity=0.101 Sum_probs=61.3
Q ss_pred CCCceEEeeecCchhHHHHHHhc--CCCccEEEEEcccHHHHHHHHHhcCC------CCeecCccccchhhhcccCccEE
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKA--DVSAQVVEAFDINDKANDVYELNFGH------RPYQGNIQNLTAAELDMYGAHAW 81 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~a--G~~~~~v~a~e~~~~a~~~~~~n~~~------~~~~~di~~~~~~~~~~~~~D~l 81 (390)
...-+|||++||.||.++.+... +-. .|+|+|+++.+++..+.|... .++++|..++... +.+ .+|+|
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g--~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~-~~~-~FD~I 179 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKG--LLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPH-FSG-FFDRI 179 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCS--EEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHH-HTT-CEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhh-ccc-cCCEE
Confidence 34568999999999999988764 222 699999999999999988631 2346777766421 222 59999
Q ss_pred EeCCCCchhhhccC
Q 016377 82 LLSPPCQPYTRQGL 95 (390)
Q Consensus 82 ~~g~PCq~fS~~g~ 95 (390)
+..+||.+.....+
T Consensus 180 l~DaPCSg~G~~rr 193 (456)
T 3m4x_A 180 VVDAPCSGEGMFRK 193 (456)
T ss_dssp EEECCCCCGGGTTT
T ss_pred EECCCCCCcccccc
Confidence 99999988766543
No 71
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.13 E-value=0.00081 Score=67.27 Aligned_cols=82 Identities=16% Similarity=0.109 Sum_probs=62.1
Q ss_pred CCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
..-+|||+|||.||.++-+... +- --.|+|+|+++.+++..+.|.. . .++++|..++... ..+ .+|+++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~-~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~-~~~-~fD~Il~ 193 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNN-EGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAA-VPE-MFDAILL 193 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTT-CSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHH-STT-CEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhh-ccc-cCCEEEE
Confidence 4568999999999999988874 21 1169999999999999998863 1 2456788776431 222 5999999
Q ss_pred CCCCchhhhccC
Q 016377 84 SPPCQPYTRQGL 95 (390)
Q Consensus 84 g~PCq~fS~~g~ 95 (390)
-+||.+.....+
T Consensus 194 D~PcSg~G~~~~ 205 (479)
T 2frx_A 194 DAPCSGEGVVRK 205 (479)
T ss_dssp ECCCCCGGGGGT
T ss_pred CCCcCCcccccC
Confidence 999998876654
No 72
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=97.11 E-value=0.00045 Score=59.17 Aligned_cols=74 Identities=19% Similarity=0.200 Sum_probs=56.6
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhh-hcccCccEEE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAE-LDMYGAHAWL 82 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~-~~~~~~D~l~ 82 (390)
..-+|||++||.|.++..+...|.. .|.++|+++.+++..+.|... .++++|+.+..... .....+|+++
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGMD--KSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCEEEeCCccCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 4568999999999999988877754 799999999999988888631 35678887753321 1123599999
Q ss_pred eCCC
Q 016377 83 LSPP 86 (390)
Q Consensus 83 ~g~P 86 (390)
..+|
T Consensus 122 ~~~~ 125 (187)
T 2fhp_A 122 LDPP 125 (187)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 9888
No 73
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.10 E-value=0.00065 Score=66.00 Aligned_cols=106 Identities=12% Similarity=0.128 Sum_probs=72.0
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCc-------------------------------------cEEEEEcccHHHHHHHH
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSA-------------------------------------QVVEAFDINDKANDVYE 53 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~-------------------------------------~~v~a~e~~~~a~~~~~ 53 (390)
..-.++|.|||.|++.+-+...+.+. ..++++|+|+.+++.-+
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 34679999999998887666543220 13999999999999999
Q ss_pred HhcC-----C--CCeecCccccchhhhcccCccEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEE
Q 016377 54 LNFG-----H--RPYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126 (390)
Q Consensus 54 ~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ 126 (390)
.|.. + .++++|+.++... . .+|+++..||- |.+.+...+...|+.++.+.++.+ ..-+++++
T Consensus 274 ~Na~~~gl~~~I~~~~~D~~~l~~~---~-~fD~Iv~NPPY------G~rl~~~~~l~~ly~~lg~~lk~~-~g~~~~ii 342 (384)
T 3ldg_A 274 KNAREVGLEDVVKLKQMRLQDFKTN---K-INGVLISNPPY------GERLLDDKAVDILYNEMGETFAPL-KTWSQFIL 342 (384)
T ss_dssp HHHHHTTCTTTEEEEECCGGGCCCC---C-CSCEEEECCCC------TTTTSCHHHHHHHHHHHHHHHTTC-TTSEEEEE
T ss_pred HHHHHcCCCCceEEEECChHHCCcc---C-CcCEEEECCch------hhccCCHHHHHHHHHHHHHHHhhC-CCcEEEEE
Confidence 9863 1 2467898887543 2 49999999993 444332334456777777777654 23445554
Q ss_pred e
Q 016377 127 E 127 (390)
Q Consensus 127 E 127 (390)
=
T Consensus 343 t 343 (384)
T 3ldg_A 343 T 343 (384)
T ss_dssp E
T ss_pred E
Confidence 3
No 74
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.09 E-value=0.0034 Score=53.52 Aligned_cols=119 Identities=16% Similarity=0.146 Sum_probs=77.7
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
...+|+|+.||.|.++.-+...+ . .+.++|+++.+++..+.|... .++.+|+.+.. .... .+|+++.
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~-~--~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~--~~D~v~~ 106 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRV-R--RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEAL-CKIP--DIDIAVV 106 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTS-S--EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHH-TTSC--CEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-C--EEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhc-ccCC--CCCEEEE
Confidence 45699999999999999999888 4 799999999999988887521 23456665511 1112 4999998
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCc-EEEEeccccccChHHHHHHHHHHHhCCceeEEEEe
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH-MLFVENVVGFETSDTHAKMIEILANSDYLTQEFIL 157 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~-~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l 157 (390)
+.+.. + ...++.++.++ + +|. .+++... +......+.+.|++.||.+....+
T Consensus 107 ~~~~~------------~-~~~~l~~~~~~---l--~~gG~l~~~~~----~~~~~~~~~~~l~~~g~~~~~~~~ 159 (192)
T 1l3i_A 107 GGSGG------------E-LQEILRIIKDK---L--KPGGRIIVTAI----LLETKFEAMECLRDLGFDVNITEL 159 (192)
T ss_dssp SCCTT------------C-HHHHHHHHHHT---E--EEEEEEEEEEC----BHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCchH------------H-HHHHHHHHHHh---c--CCCcEEEEEec----CcchHHHHHHHHHHCCCceEEEEE
Confidence 76641 1 12233444443 3 453 3333221 234577888999999997665433
No 75
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.08 E-value=0.00028 Score=68.66 Aligned_cols=73 Identities=19% Similarity=0.092 Sum_probs=54.9
Q ss_pred CceEEeeecCchhHHHHHHhc--CCCccEEEEEcccHHHHHHHHHhcCC--------CCeecCccccch-hhhcccCccE
Q 016377 12 AWRVLEFYSGIGGMRYSLMKA--DVSAQVVEAFDINDKANDVYELNFGH--------RPYQGNIQNLTA-AELDMYGAHA 80 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~a--G~~~~~v~a~e~~~~a~~~~~~n~~~--------~~~~~di~~~~~-~~~~~~~~D~ 80 (390)
.-+|||||||.|++++-+... |.. .|+++|+++.|++..+.|... .++++|+.++.. . +. ..+|+
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~--~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~-~~-~~fD~ 128 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVE--KAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKE-WG-FGFDY 128 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEE--EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSC-CS-SCEEE
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHh-hC-CCCcE
Confidence 468999999999999977763 533 899999999999999999642 235667766532 2 22 25999
Q ss_pred EEeCCCCc
Q 016377 81 WLLSPPCQ 88 (390)
Q Consensus 81 l~~g~PCq 88 (390)
++.-|+|.
T Consensus 129 V~lDP~g~ 136 (392)
T 3axs_A 129 VDLDPFGT 136 (392)
T ss_dssp EEECCSSC
T ss_pred EEECCCcC
Confidence 99999753
No 76
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.08 E-value=0.0049 Score=55.63 Aligned_cols=113 Identities=12% Similarity=0.071 Sum_probs=79.1
Q ss_pred CCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhc-----CC--CCeecCccccchhhhcccCccEEE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNF-----GH--RPYQGNIQNLTAAELDMYGAHAWL 82 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~-----~~--~~~~~di~~~~~~~~~~~~~D~l~ 82 (390)
..-+|+|+.||.|.++..+... |- ...+.++|+++.+++.-+.|. ++ .++.+|+.+. ++...+|+++
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~~~D~v~ 167 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGP-EGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG----IEEENVDHVI 167 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC----CCCCSEEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHHhCC-CeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc----cCCCCcCEEE
Confidence 4568999999999999999987 42 126999999999998888885 22 3467788754 3333599999
Q ss_pred eCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCC--ce
Q 016377 83 LSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSD--YL 151 (390)
Q Consensus 83 ~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~G--Y~ 151 (390)
..+|+. ..++.++.++++. .-.+++.+.. ......+.+.|.+.| |.
T Consensus 168 ~~~~~~---------------~~~l~~~~~~L~~---gG~l~~~~~~-----~~~~~~~~~~l~~~g~~f~ 215 (255)
T 3mb5_A 168 LDLPQP---------------ERVVEHAAKALKP---GGFFVAYTPC-----SNQVMRLHEKLREFKDYFM 215 (255)
T ss_dssp ECSSCG---------------GGGHHHHHHHEEE---EEEEEEEESS-----HHHHHHHHHHHHHTGGGBS
T ss_pred ECCCCH---------------HHHHHHHHHHcCC---CCEEEEEECC-----HHHHHHHHHHHHHcCCCcc
Confidence 877733 2456667776654 2345554422 234677888899998 64
No 77
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.06 E-value=0.014 Score=51.99 Aligned_cols=145 Identities=10% Similarity=0.086 Sum_probs=83.6
Q ss_pred CCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhc---CC-CCeecCccccchhhhcccCccEEEeCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNF---GH-RPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~---~~-~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
..-+|||+.||.|.++.-+.+. |- ...|+++|+++.+++....+. +. ..+.+|+.+...-......+|+++..+
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~-~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~ 155 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGP-DGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADV 155 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECC
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcC
Confidence 3458999999999999998875 32 126899999977544443332 22 456788887532122223599999876
Q ss_pred CCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecccc---cc-Ch-HHHHHHHHHHHhCCceeEEEE-eCC
Q 016377 86 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG---FE-TS-DTHAKMIEILANSDYLTQEFI-LSP 159 (390)
Q Consensus 86 PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~---~~-~~-~~~~~~~~~l~~~GY~~~~~~-l~a 159 (390)
| ..+....++.++.++++- --+++++--++ .. .. ..+..-++.|++.||.+...+ ++
T Consensus 156 ~------------~~~~~~~~~~~~~~~Lkp----gG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~- 218 (233)
T 2ipx_A 156 A------------QPDQTRIVALNAHTFLRN----GGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLE- 218 (233)
T ss_dssp C------------CTTHHHHHHHHHHHHEEE----EEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECT-
T ss_pred C------------CccHHHHHHHHHHHHcCC----CeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecC-
Confidence 5 122323344556665543 23344432211 10 00 123333688889999876643 32
Q ss_pred CCcCCCccCcEEEEEEEeC
Q 016377 160 LQFGVPYSRPRYFCLAKRK 178 (390)
Q Consensus 160 ~~~G~pq~R~R~~~i~~~~ 178 (390)
|..+...+++|.++
T Consensus 219 -----~~~~~~~~v~~~~~ 232 (233)
T 2ipx_A 219 -----PYERDHAVVVGVYR 232 (233)
T ss_dssp -----TTSSSEEEEEEEEC
T ss_pred -----CccCCcEEEEEEeC
Confidence 33345677777653
No 78
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=97.06 E-value=0.0071 Score=53.82 Aligned_cols=68 Identities=18% Similarity=0.061 Sum_probs=54.1
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----CCeecCccccchhhhcccCccEEEeCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
...+|||+.||.|.++..+...|. .+.++|+++.+++..+.+.+. ..+++|+.++.. + ..+|+++...
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~---~-~~fD~v~~~~ 109 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK---NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNI---N-RKFDLITCCL 109 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCC---S-CCEEEEEECT
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC---cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCc---c-CCceEEEEcC
Confidence 457999999999999999999885 499999999999888887642 346778877643 2 2599999764
No 79
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.06 E-value=0.0061 Score=56.31 Aligned_cols=129 Identities=12% Similarity=0.057 Sum_probs=75.0
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcc-cHHHHHHHHHhc-----CCC-----------CeecCccccchhhh
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDI-NDKANDVYELNF-----GHR-----------PYQGNIQNLTAAEL 73 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~-~~~a~~~~~~n~-----~~~-----------~~~~di~~~~~~~~ 73 (390)
..-+||||.||.|.+++.+...|.. .|.++|+ ++.+++..+.|. ... +...|..+... ++
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~~~--~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~ 155 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAGAD--QVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPD-SL 155 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTCS--EEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTH-HH
T ss_pred CCCeEEEecccccHHHHHHHHcCCC--EEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccH-HH
Confidence 3458999999999999999998864 7999999 899999988887 221 12223332211 22
Q ss_pred ----cccCccEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCC----cEEEEecc-ccccChHHHHHHHHH
Q 016377 74 ----DMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPP----HMLFVENV-VGFETSDTHAKMIEI 144 (390)
Q Consensus 74 ----~~~~~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P----~~~~~ENV-~~~~~~~~~~~~~~~ 144 (390)
....+|+++++-.... .+....++..+.++++.. .| .++++-.. ...+. .....+++.
T Consensus 156 ~~~~~~~~fD~Ii~~dvl~~----------~~~~~~ll~~l~~~Lk~~--~p~~gG~l~v~~~~~~~~~~-~~~~~~~~~ 222 (281)
T 3bzb_A 156 QRCTGLQRFQVVLLADLLSF----------HQAHDALLRSVKMLLALP--ANDPTAVALVTFTHHRPHLA-ERDLAFFRL 222 (281)
T ss_dssp HHHHSCSSBSEEEEESCCSC----------GGGHHHHHHHHHHHBCCT--TTCTTCEEEEEECC---------CTHHHHH
T ss_pred HhhccCCCCCEEEEeCcccC----------hHHHHHHHHHHHHHhccc--CCCCCCEEEEEEEeeecccc-hhHHHHHHH
Confidence 2235999987433111 122345566666665521 14 43443222 11110 123456677
Q ss_pred HHhCC-ceeEEE
Q 016377 145 LANSD-YLTQEF 155 (390)
Q Consensus 145 l~~~G-Y~~~~~ 155 (390)
+++.| |.+...
T Consensus 223 l~~~G~f~v~~~ 234 (281)
T 3bzb_A 223 VNADGALIAEPW 234 (281)
T ss_dssp HHHSTTEEEEEE
T ss_pred HHhcCCEEEEEe
Confidence 88899 987643
No 80
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.05 E-value=0.00069 Score=56.98 Aligned_cols=75 Identities=12% Similarity=0.122 Sum_probs=56.6
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----CCeecCccccchhhhc-ccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RPYQGNIQNLTAAELD-MYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----~~~~~di~~~~~~~~~-~~~~D~l~~g 84 (390)
..-+|+|++||.|.++..+...|.+ +.++|+++.+++..+.|... .++++|+.+.....-. ...+|+++..
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE---AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE---EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe---EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 3458999999999999999998853 99999999999998888642 3567787764321111 1149999999
Q ss_pred CCCc
Q 016377 85 PPCQ 88 (390)
Q Consensus 85 ~PCq 88 (390)
+|..
T Consensus 118 ~~~~ 121 (171)
T 1ws6_A 118 PPYA 121 (171)
T ss_dssp CCTT
T ss_pred CCCc
Confidence 8843
No 81
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.05 E-value=0.0049 Score=54.39 Aligned_cols=133 Identities=8% Similarity=-0.024 Sum_probs=80.0
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
..-+|||+.||.|.++..+....- ...+.|+|+++.+++.-+.|.. + .++++|+.++.. .++...+|.++..
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~-~~~~~~~d~v~~~ 115 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTD-VFEPGEVKRVYLN 115 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHH-HCCTTSCCEEEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHh-hcCcCCcCEEEEE
Confidence 346799999999999999887621 1258999999999988887742 2 346788887531 2334458998887
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEEE
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEF 155 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~ 155 (390)
+|+.........+.. ....++.++.++++- .- .++++-- ....+..+++.|.+.||.....
T Consensus 116 ~~~p~~~~~~~~~rl--~~~~~l~~~~~~Lkp---gG-~l~~~td----~~~~~~~~~~~~~~~g~~~~~~ 176 (213)
T 2fca_A 116 FSDPWPKKRHEKRRL--TYSHFLKKYEEVMGK---GG-SIHFKTD----NRGLFEYSLKSFSEYGLLLTYV 176 (213)
T ss_dssp SCCCCCSGGGGGGST--TSHHHHHHHHHHHTT---SC-EEEEEES----CHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCCcCcccccccc--CcHHHHHHHHHHcCC---CC-EEEEEeC----CHHHHHHHHHHHHHCCCccccc
Confidence 775432211110001 012334444454432 22 3334321 1234677788888889876543
No 82
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.04 E-value=0.0055 Score=56.31 Aligned_cols=114 Identities=18% Similarity=0.148 Sum_probs=76.9
Q ss_pred CCceEEeeecCchhHHHHHHhc---CCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA---DVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHA 80 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a---G~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~ 80 (390)
...+|||+.||.|+++.-+... +. .+.++|+++.+++..+.|... .++.+|+.+. ++...+|+
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~----~~~~~fD~ 182 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKG---TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF----ISDQMYDA 182 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSS---EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC----CCSCCEEE
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCC---EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc----CcCCCccE
Confidence 4468999999999999999886 33 699999999999988887521 2356777662 22235999
Q ss_pred EEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEE
Q 016377 81 WLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQE 154 (390)
Q Consensus 81 l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~ 154 (390)
++..+| +. ..++.++.++++. .-.+++..+.. .....+++.|++.||....
T Consensus 183 Vi~~~~--------------~~-~~~l~~~~~~Lkp---gG~l~i~~~~~-----~~~~~~~~~l~~~Gf~~~~ 233 (275)
T 1yb2_A 183 VIADIP--------------DP-WNHVQKIASMMKP---GSVATFYLPNF-----DQSEKTVLSLSASGMHHLE 233 (275)
T ss_dssp EEECCS--------------CG-GGSHHHHHHTEEE---EEEEEEEESSH-----HHHHHHHHHSGGGTEEEEE
T ss_pred EEEcCc--------------CH-HHHHHHHHHHcCC---CCEEEEEeCCH-----HHHHHHHHHHHHCCCeEEE
Confidence 998554 11 2456666665543 23444444321 2466788888999997543
No 83
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=97.04 E-value=0.00096 Score=62.01 Aligned_cols=74 Identities=20% Similarity=0.175 Sum_probs=58.5
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCc---cEE
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGA---HAW 81 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~---D~l 81 (390)
..+|+|++||.|.+++.+...+ ...|.++|+++.+++.-+.|... .++++|+.+... + .+ |++
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~~--~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~----~-~f~~~D~I 196 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKFS--DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK----E-KFASIEMI 196 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHHS--SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG----G-GTTTCCEE
T ss_pred CCEEEEEeCchhHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc----c-ccCCCCEE
Confidence 3589999999999999998872 22699999999999999988631 246788877422 2 36 999
Q ss_pred EeCCCCchhhh
Q 016377 82 LLSPPCQPYTR 92 (390)
Q Consensus 82 ~~g~PCq~fS~ 92 (390)
+..|||-+.+.
T Consensus 197 vsnPPyi~~~~ 207 (284)
T 1nv8_A 197 LSNPPYVKSSA 207 (284)
T ss_dssp EECCCCBCGGG
T ss_pred EEcCCCCCccc
Confidence 99999988776
No 84
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.03 E-value=0.006 Score=57.65 Aligned_cols=147 Identities=14% Similarity=0.088 Sum_probs=92.4
Q ss_pred CceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCC----------CCeecCccccchhhhcccCccE
Q 016377 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH----------RPYQGNIQNLTAAELDMYGAHA 80 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~----------~~~~~di~~~~~~~~~~~~~D~ 80 (390)
..+|+|+.||.|++...+... +.. .|.++|+|+.+++.-+.|++. .++.+|+.+.... . ...+|+
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~-~-~~~fDv 192 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVE--NIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN-V-TNTYDV 192 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCC--EEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH-C-CSCEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCC--EEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhh-c-CCCceE
Confidence 468999999999999988875 433 799999999999999999864 1356776654221 1 225999
Q ss_pred EEeCCCCchhhhccCCCCCCChhhhhH-HHHHHhcc-cccCCCc-EEEEeccccccChHHHHHHHHHHHhCCceeEEEEe
Q 016377 81 WLLSPPCQPYTRQGLQKQSSDARAFSF-LKILELIP-HTVKPPH-MLFVENVVGFETSDTHAKMIEILANSDYLTQEFIL 157 (390)
Q Consensus 81 l~~g~PCq~fS~~g~~~~~~d~r~~l~-~~~~~~i~-~~~~~P~-~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l 157 (390)
++..++.. + +. ...++ .++++.+. .+ +|. +++++....+.....+..+.+.+.+..-.+.....
T Consensus 193 Ii~d~~~p-~---~~-------~~~l~~~~~l~~~~~~L--kpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~ 259 (321)
T 2pt6_A 193 IIVDSSDP-I---GP-------AETLFNQNFYEKIYNAL--KPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANI 259 (321)
T ss_dssp EEEECCCS-S---SG-------GGGGSSHHHHHHHHHHE--EEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred EEECCcCC-C---Cc-------chhhhHHHHHHHHHHhc--CCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEE
Confidence 99876532 1 11 11222 23332222 33 453 66666555555666788888889887655554433
Q ss_pred CCCCcCCCccCcEEEEEEEeC
Q 016377 158 SPLQFGVPYSRPRYFCLAKRK 178 (390)
Q Consensus 158 ~a~~~G~pq~R~R~~~i~~~~ 178 (390)
.-..|. .-...|++|+++
T Consensus 260 ~vp~~~---~g~w~f~~as~~ 277 (321)
T 2pt6_A 260 SIPTYP---CGCIGILCCSKT 277 (321)
T ss_dssp ECTTSG---GGEEEEEEEESS
T ss_pred Eecccc---CceEEEEEeeCC
Confidence 322231 124667888765
No 85
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.01 E-value=0.017 Score=51.32 Aligned_cols=143 Identities=8% Similarity=0.090 Sum_probs=85.5
Q ss_pred CCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCC----CCeecCccccch-hhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH----RPYQGNIQNLTA-AELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~----~~~~~di~~~~~-~~~~~~~~D~l~~g 84 (390)
..-+|||+.||.|.++.-+... |-. .|+++|+++.+++..+.|... ..+.+|+.+... ..+. ..+|+++..
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~ 150 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKG--IVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYED 150 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTS--EEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEEC
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCc--EEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEEe
Confidence 4568999999999999988876 633 799999999999888877643 235678876211 1222 259999833
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecccc-----ccCh-HHHHHHHHHHHhCCceeEEEEeC
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG-----FETS-DTHAKMIEILANSDYLTQEFILS 158 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~-----~~~~-~~~~~~~~~l~~~GY~~~~~~l~ 158 (390)
+| ..+....++.++.++++. . -.+++. +.. -... ..+..-+..|.+.||.+....
T Consensus 151 ~~------------~~~~~~~~l~~~~~~Lkp---g-G~l~i~-~~~~~~~~~~~~~~~~~~~l~~l~~~Gf~~~~~~-- 211 (230)
T 1fbn_A 151 VA------------QPNQAEILIKNAKWFLKK---G-GYGMIA-IKARSIDVTKDPKEIFKEQKEILEAGGFKIVDEV-- 211 (230)
T ss_dssp CC------------STTHHHHHHHHHHHHEEE---E-EEEEEE-EEGGGTCSSSCHHHHHHHHHHHHHHHTEEEEEEE--
T ss_pred cC------------ChhHHHHHHHHHHHhCCC---C-cEEEEE-EecCCCCCCCCHHHhhHHHHHHHHHCCCEEEEEE--
Confidence 22 011223345555555543 1 233332 211 0011 234333348888999765443
Q ss_pred CCCcCCCccCcEEEEEEEeC
Q 016377 159 PLQFGVPYSRPRYFCLAKRK 178 (390)
Q Consensus 159 a~~~G~pq~R~R~~~i~~~~ 178 (390)
++ -|..+..+++++.++
T Consensus 212 --~~-~~~~~~~~~v~~~k~ 228 (230)
T 1fbn_A 212 --DI-EPFEKDHVMFVGIWE 228 (230)
T ss_dssp --EC-TTTSTTEEEEEEEEC
T ss_pred --cc-CCCccceEEEEEEeC
Confidence 12 344677888888875
No 86
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=96.99 E-value=0.00059 Score=66.66 Aligned_cols=121 Identities=10% Similarity=0.063 Sum_probs=78.0
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC----C----CCeecCccccchhhhcccCccEEEe
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG----H----RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~----~----~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
.-+|+|||||.|+.++.+...|. .|.++|+++.+++.-+.|.. + .++++|+.++-.. +....+|+++.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~---~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~-~~~~~fDvV~l 169 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKAS---QGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPL-IKTFHPDYIYV 169 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCS---EEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHH-HHHHCCSEEEE
T ss_pred CCEEEEeCCCchHHHHHHHhcCC---EEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhh-ccCCCceEEEE
Confidence 46899999999999999998874 59999999999999998864 2 3567898875322 22125999999
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHH
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 145 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l 145 (390)
.||=.+- ..|+.-..+| -..-+..+.+.+... -+.+++---|++ .+...++.|
T Consensus 170 DPPrr~~-~~grv~~led-~~P~l~~~~~~l~~~---~~~~~vK~sP~l----d~~~~~~~l 222 (410)
T 3ll7_A 170 DPARRSG-ADKRVYAIAD-CEPDLIPLATELLPF---CSSILAKLSPMI----DLWDTLQSL 222 (410)
T ss_dssp CCEEC------CCCCGGG-EESCHHHHHHHHGGG---SSEEEEEECTTS----CHHHHHHHC
T ss_pred CCCCcCC-CCceEEehhh-cCCCHHHHHHHHHhh---CCcEEEEcCCCC----ChHHHHhhC
Confidence 9995431 1122112222 233456666655442 346666666666 354444444
No 87
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=96.98 E-value=0.0046 Score=55.77 Aligned_cols=129 Identities=12% Similarity=0.144 Sum_probs=75.6
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhc-------------CC-CCeecCccccchhhhccc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-------------GH-RPYQGNIQNLTAAELDMY 76 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~-------------~~-~~~~~di~~~~~~~~~~~ 76 (390)
..-+|||++||.|++++.+...+-+ ..+.++|+++.+++..+.|. ++ .++.+|+.+..+..+...
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPE-DLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTT-SEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCC-CCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 4568999999999999999987632 26999999999887766542 22 356788887433334344
Q ss_pred CccEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCc
Q 016377 77 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDY 150 (390)
Q Consensus 77 ~~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY 150 (390)
.+|.++..+|...+......+..- ...++.++.++++. .-.+++.-.+. ..++.+.+.+...|.
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~--~~~~l~~~~~~Lkp---gG~l~~~td~~-----~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARII--TNTLLSEYAYVLKE---GGVVYTITDVK-----DLHEWMVKHLEEHPL 191 (246)
T ss_dssp CEEEEEEESCCCC------CSSCC--CHHHHHHHHHHEEE---EEEEEEEESCH-----HHHHHHHHHHHHSTT
T ss_pred ccCEEEEECCCcccccchhHHhhc--cHHHHHHHHHHcCC---CCEEEEEeccH-----HHHHHHHHHHHhCcC
Confidence 588888777765443221111111 12455555565543 22344422322 235556667776653
No 88
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=96.98 E-value=0.0078 Score=51.34 Aligned_cols=136 Identities=13% Similarity=0.050 Sum_probs=75.1
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC------CCeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH------RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~------~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
..-+|||+.||.|.++..+...|. .|.++|+++.+++.-+.|... .+++.|..++.. +....+|+++..
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~~~---~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~--~~~~~fD~v~~~ 96 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGLSK---KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDH--YVREPIRAAIFN 96 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGG--TCCSCEEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHh--hccCCcCEEEEe
Confidence 456899999999999999998854 599999999999988887642 234566665432 223359999887
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccC---hHHHHHHHHHHHhCCceeEEE
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET---SDTHAKMIEILANSDYLTQEF 155 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~---~~~~~~~~~~l~~~GY~~~~~ 155 (390)
++.-+.+...... ..+.....+.++.++++. .-.++++.....-.. ......+++.+...+|.+...
T Consensus 97 ~~~~~~~~~~~~~-~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 166 (185)
T 3mti_A 97 LGYLPSADKSVIT-KPHTTLEAIEKILDRLEV---GGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLY 166 (185)
T ss_dssp EC------------CHHHHHHHHHHHHHHEEE---EEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEE
T ss_pred CCCCCCcchhccc-ChhhHHHHHHHHHHhcCC---CcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEe
Confidence 5433322111100 011222334555554443 234444443321111 123445556666666766443
No 89
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=96.98 E-value=0.0079 Score=54.11 Aligned_cols=146 Identities=11% Similarity=0.079 Sum_probs=92.3
Q ss_pred CCCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCC----CCeecCccccchhhhcccCccEEEeC
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH----RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~----~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
+..-+|+||-||.|.++.-+.+. |-+. .|+|+|+++...+..+.+... .++.+|..+..........+|+++..
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G-~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d 154 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRG-RIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYAD 154 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTC-EEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEe
Confidence 34568999999999999999874 4322 699999999999988888754 24667777654322222358988865
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecccccc----ChHHHHHHHHHHHhCCceeEEEEeCCC
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE----TSDTHAKMIEILANSDYLTQEFILSPL 160 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~----~~~~~~~~~~~l~~~GY~~~~~~l~a~ 160 (390)
.+.. +.....+.++.++++- .-.+++.......- ....++..++.|++.||.+...+ +
T Consensus 155 ~~~~------------~~~~~~l~~~~r~LKp---GG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i-~-- 216 (233)
T 4df3_A 155 VAQP------------EQAAIVVRNARFFLRD---GGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVV-H-- 216 (233)
T ss_dssp CCCT------------THHHHHHHHHHHHEEE---EEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEE-E--
T ss_pred ccCC------------hhHHHHHHHHHHhccC---CCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEE-c--
Confidence 5522 2333456666676654 23455543221110 11357788899999999886553 1
Q ss_pred CcCCCccCcEEEEEEE
Q 016377 161 QFGVPYSRPRYFCLAK 176 (390)
Q Consensus 161 ~~G~pq~R~R~~~i~~ 176 (390)
+ .|-.|.-+.++|.
T Consensus 217 -L-~pf~~~H~lv~~~ 230 (233)
T 4df3_A 217 -L-DPFDRDHAMIYAV 230 (233)
T ss_dssp -C-TTTSTTEEEEEEC
T ss_pred -c-CCCCCceEEEEEE
Confidence 1 2333455555553
No 90
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=96.97 E-value=0.0019 Score=63.04 Aligned_cols=152 Identities=16% Similarity=0.065 Sum_probs=87.0
Q ss_pred CceEEeeecCchhHHHHHHhc--CCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCCCch
Q 016377 12 AWRVLEFYSGIGGMRYSLMKA--DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPPCQP 89 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~a--G~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~ 89 (390)
.-+|+|+.||.|++.+.+.+. ... .+.|+|+++.+++.- ..-.++++|+.+.... ..+|++++.||.-.
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~--~i~gvDi~~~~~~~a---~~~~~~~~D~~~~~~~----~~fD~Ii~NPPy~~ 110 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAY--RFVGVEIDPKALDLP---PWAEGILADFLLWEPG----EAFDLILGNPPYGI 110 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCS--EEEEEESCTTTCCCC---TTEEEEESCGGGCCCS----SCEEEEEECCCCCC
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCC--eEEEEECCHHHHHhC---CCCcEEeCChhhcCcc----CCCCEEEECcCccC
Confidence 349999999999999998864 222 799999999887543 1124567888776432 25999999999865
Q ss_pred hhhccCCC-CCC--------------ChhhhhHHHHHH-hcccccCCCc-EEEEeccccccChHHHHHHHHHHHhCCcee
Q 016377 90 YTRQGLQK-QSS--------------DARAFSFLKILE-LIPHTVKPPH-MLFVENVVGFETSDTHAKMIEILANSDYLT 152 (390)
Q Consensus 90 fS~~g~~~-~~~--------------d~r~~l~~~~~~-~i~~~~~~P~-~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~ 152 (390)
.+..+.-. ... +.+..++..+++ +.+.+ +|. .+++.--.+++.....+.+.+.|.+.|+ .
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~L--k~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~-~ 187 (421)
T 2ih2_A 111 VGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLL--KPGGVLVFVVPATWLVLEDFALLREFLAREGK-T 187 (421)
T ss_dssp BSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHE--EEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSE-E
T ss_pred cccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHh--CCCCEEEEEEChHHhcCccHHHHHHHHHhcCC-e
Confidence 54321100 010 111223333332 22233 332 2233322345555556778888888887 4
Q ss_pred EEEEeCCCCc-CCCccCcEEEEEEEeC
Q 016377 153 QEFILSPLQF-GVPYSRPRYFCLAKRK 178 (390)
Q Consensus 153 ~~~~l~a~~~-G~pq~R~R~~~i~~~~ 178 (390)
....+. .-| |.+. .+++++..+.
T Consensus 188 ~i~~l~-~~F~~~~~--~~~il~~~k~ 211 (421)
T 2ih2_A 188 SVYYLG-EVFPQKKV--SAVVIRFQKS 211 (421)
T ss_dssp EEEEEE-SCSTTCCC--CEEEEEEESS
T ss_pred EEEECC-CCCCCCCc--cEEEEEEEeC
Confidence 444444 333 3332 4555555543
No 91
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.97 E-value=0.0011 Score=60.71 Aligned_cols=72 Identities=11% Similarity=0.130 Sum_probs=58.1
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC----CCeecCccccchhhhc-ccCccEEEeCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH----RPYQGNIQNLTAAELD-MYGAHAWLLSP 85 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~----~~~~~di~~~~~~~~~-~~~~D~l~~g~ 85 (390)
..-+|+|+.||.|.++..+...|. .|.|+|+|+..++..+.++.. .++++|+.+++..++. +..+| +++.+
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~~---~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTECD---NLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDKPLR-VVGNL 104 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTSS---EEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSCCSSCEE-EEEEC
T ss_pred CcCEEEEEcccccHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhccCCCeE-EEecC
Confidence 356899999999999999998873 699999999999999999853 4678999998765542 22366 78888
Q ss_pred C
Q 016377 86 P 86 (390)
Q Consensus 86 P 86 (390)
|
T Consensus 105 P 105 (255)
T 3tqs_A 105 P 105 (255)
T ss_dssp C
T ss_pred C
Confidence 7
No 92
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=96.94 E-value=0.0011 Score=60.44 Aligned_cols=71 Identities=13% Similarity=0.175 Sum_probs=57.9
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC---CCeecCccccchhhhcccCccEEEeCCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH---RPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~---~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
..-+|+|+.||.|.++..+...|.. .|.++|+|+.+++..+.+ +. .++++|+.+++..++.+ ..++++.+|
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~~~~--~v~avEid~~~~~~~~~~-~~~~v~~i~~D~~~~~~~~~~~--~~~vv~NlP 104 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQHPLK--KLYVIELDREMVENLKSI-GDERLEVINEDASKFPFCSLGK--ELKVVGNLP 104 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTSCCS--EEEEECCCHHHHHHHTTS-CCTTEEEECSCTTTCCGGGSCS--SEEEEEECC
T ss_pred CcCEEEEEcCchHHHHHHHHHcCCC--eEEEEECCHHHHHHHHhc-cCCCeEEEEcchhhCChhHccC--CcEEEEECc
Confidence 3458999999999999999998744 799999999999999988 53 46789999987655443 347888888
No 93
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=96.93 E-value=0.00056 Score=66.30 Aligned_cols=73 Identities=19% Similarity=0.042 Sum_probs=54.6
Q ss_pred CceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcC-----------------C----CCeecCccccc
Q 016377 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFG-----------------H----RPYQGNIQNLT 69 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~-----------------~----~~~~~di~~~~ 69 (390)
..+|||+|||.|++++.+... |-. .|+++|+++.|++.-+.|.. + .++++|+.++.
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~--~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~ 125 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAE--EVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM 125 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCS--EEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCC--eEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHH
Confidence 468999999999999998875 533 59999999999999888852 1 23456666553
Q ss_pred hhhhcccCccEEEeCCCCc
Q 016377 70 AAELDMYGAHAWLLSPPCQ 88 (390)
Q Consensus 70 ~~~~~~~~~D~l~~g~PCq 88 (390)
.. .. ..+|+++.-|||.
T Consensus 126 ~~-~~-~~fD~I~lDP~~~ 142 (378)
T 2dul_A 126 AE-RH-RYFHFIDLDPFGS 142 (378)
T ss_dssp HH-ST-TCEEEEEECCSSC
T ss_pred Hh-cc-CCCCEEEeCCCCC
Confidence 22 11 2499999999974
No 94
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=96.92 E-value=0.002 Score=59.11 Aligned_cols=76 Identities=14% Similarity=0.064 Sum_probs=60.6
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccch---hhhcccCccEEEeCCCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA---AELDMYGAHAWLLSPPC 87 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~---~~~~~~~~D~l~~g~PC 87 (390)
..-+|||+.||.|.++..|.+.|. .|.++|+++.+++..+.|.....+..|+.+++. .++.+ .+|++++....
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~g~---~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~-~fD~Vv~~~~l 120 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALERGA---SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAG-HFDFVLNDRLI 120 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTT-CCSEEEEESCG
T ss_pred CcCEEEEEeCcchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCC-CccEEEEhhhh
Confidence 456899999999999999999886 489999999999999999987767777777654 23332 59999987654
Q ss_pred chh
Q 016377 88 QPY 90 (390)
Q Consensus 88 q~f 90 (390)
+-|
T Consensus 121 ~~~ 123 (261)
T 3iv6_A 121 NRF 123 (261)
T ss_dssp GGS
T ss_pred HhC
Confidence 443
No 95
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=96.91 E-value=0.012 Score=52.00 Aligned_cols=144 Identities=7% Similarity=0.029 Sum_probs=83.0
Q ss_pred CCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCC----CCeecCccccch-hhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH----RPYQGNIQNLTA-AELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~----~~~~~di~~~~~-~~~~~~~~D~l~~g 84 (390)
..-+|+|+.||.|.++..+.+. |-. ..|.++|+++.+++....|... .++++|+.+... ..+.+ .+|+++..
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~-~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~-~~D~v~~~ 150 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWE-GKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVP-KVDVIFED 150 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCC-CEEEEEEC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCC-eEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccC-CceEEEEC
Confidence 3458999999999999998865 421 2689999999887777666542 346788877432 12232 59999977
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecccccc---C-hHHHHHHHHHHHhCCceeEEEEeCCC
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE---T-SDTHAKMIEILANSDYLTQEFILSPL 160 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~---~-~~~~~~~~~~l~~~GY~~~~~~l~a~ 160 (390)
+| ..+....++.++.++++. .-.+++.-.-...- . ...+..-+..+.+. +.+....
T Consensus 151 ~~------------~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-f~~~~~~---- 210 (227)
T 1g8a_A 151 VA------------QPTQAKILIDNAEVYLKR---GGYGMIAVKSRSIDVTKEPEQVFREVERELSEY-FEVIERL---- 210 (227)
T ss_dssp CC------------STTHHHHHHHHHHHHEEE---EEEEEEEEEGGGTCTTSCHHHHHHHHHHHHHTT-SEEEEEE----
T ss_pred CC------------CHhHHHHHHHHHHHhcCC---CCEEEEEEecCCCCCCCChhhhhHHHHHHHHhh-ceeeeEe----
Confidence 66 122223346666666554 23333331111111 1 11333444445555 5543322
Q ss_pred CcCCCccCcEEEEEEEe
Q 016377 161 QFGVPYSRPRYFCLAKR 177 (390)
Q Consensus 161 ~~G~pq~R~R~~~i~~~ 177 (390)
+. .|..+.++++++.+
T Consensus 211 ~~-~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 211 NL-EPYEKDHALFVVRK 226 (227)
T ss_dssp EC-TTTSSSEEEEEEEC
T ss_pred cc-CcccCCCEEEEEEe
Confidence 22 35556778887764
No 96
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=96.91 E-value=0.003 Score=61.27 Aligned_cols=105 Identities=10% Similarity=0.065 Sum_probs=72.8
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----CCeecCccccchhhhcccCccEEEeCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
..-+|+|++||.|.++..+...|. .|.++|+++.+++.-+.|... .++.+|+.+.... ...+|+++..|
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~---~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~---~~~fD~Ii~np 306 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGA---EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTE---EARFDIIVTNP 306 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTC---EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCT---TCCEEEEEECC
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhcccc---CCCeEEEEECC
Confidence 456999999999999999999885 589999999999998888642 3567888876432 22599999999
Q ss_pred CCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecc
Q 016377 86 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129 (390)
Q Consensus 86 PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV 129 (390)
|.... .. ...+....++.++.+.++. .-.+++.-|-
T Consensus 307 p~~~~----~~-~~~~~~~~~l~~~~~~Lkp---GG~l~iv~n~ 342 (381)
T 3dmg_A 307 PFHVG----GA-VILDVAQAFVNVAAARLRP---GGVFFLVSNP 342 (381)
T ss_dssp CCCTT----CS-SCCHHHHHHHHHHHHHEEE---EEEEEEEECT
T ss_pred chhhc----cc-ccHHHHHHHHHHHHHhcCc---CcEEEEEEcC
Confidence 96531 11 0112233455556665554 3455555554
No 97
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=96.90 E-value=0.0011 Score=62.20 Aligned_cols=72 Identities=17% Similarity=0.142 Sum_probs=54.5
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
..-+|+|+.||.|.++..+...|. .|.|+|+++.+++..+.|.. . .++.+|+.++.. . .+|++++.
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~~~---~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~---~--~~D~Vv~n 113 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPLAK---KVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVF---P--KFDVCTAN 113 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTTSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCC---C--CCSEEEEE
T ss_pred CcCEEEEEcCcCcHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCc---c--cCCEEEEc
Confidence 345899999999999999988764 59999999999998888752 2 456788887642 2 48999999
Q ss_pred CCCchh
Q 016377 85 PPCQPY 90 (390)
Q Consensus 85 ~PCq~f 90 (390)
+|++..
T Consensus 114 ~py~~~ 119 (299)
T 2h1r_A 114 IPYKIS 119 (299)
T ss_dssp CCGGGH
T ss_pred CCcccc
Confidence 997643
No 98
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=96.90 E-value=0.0009 Score=62.58 Aligned_cols=71 Identities=15% Similarity=0.074 Sum_probs=58.1
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhc---CC-CCeecCccccchhhhcccCccEEEeCCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF---GH-RPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~---~~-~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
..-+|||+-||.|.++..+...+. .|.|+|+|+..++..+.++ +. .++++|+.+++..+ ..+|++++.+|
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~~~---~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~---~~fD~Iv~NlP 123 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKNAK---KVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNK---LDFNKVVANLP 123 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSS---EEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGG---SCCSEEEEECC
T ss_pred CcCEEEEECCCchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCccc---CCccEEEEeCc
Confidence 345899999999999999998864 5899999999998888886 33 56889999886443 24899999988
Q ss_pred C
Q 016377 87 C 87 (390)
Q Consensus 87 C 87 (390)
-
T Consensus 124 y 124 (295)
T 3gru_A 124 Y 124 (295)
T ss_dssp G
T ss_pred c
Confidence 4
No 99
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=96.88 E-value=0.0025 Score=57.68 Aligned_cols=45 Identities=16% Similarity=0.066 Sum_probs=36.4
Q ss_pred CCceEEeeecCchhHHHHHHhc--CCCccEEEEEcccHHHHHHHHHhc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA--DVSAQVVEAFDINDKANDVYELNF 56 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a--G~~~~~v~a~e~~~~a~~~~~~n~ 56 (390)
...+|+|++||.|.+.+.+... .- ...|+++|+++.+++.-+.|.
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~-~~~v~gvDis~~~l~~A~~~~ 97 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRS-LRQVIASDVDPAPLELAAKNL 97 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGG-EEEEEEEESCHHHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccC-CCeEEEEECCHHHHHHHHHHH
Confidence 4679999999999999988775 21 126999999999998887664
No 100
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=96.87 E-value=0.0054 Score=53.79 Aligned_cols=129 Identities=11% Similarity=0.004 Sum_probs=85.4
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
...+|||+.||.|.++..+...+-....+.++|+++.+++..+.+.. . .++.+|+.++. +....+|+++..
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~ 113 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP---LPDNTVDFIFMA 113 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS---SCSSCEEEEEEE
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC---CCCCCeeEEEee
Confidence 45689999999999999998876111269999999999988888762 1 34678887764 333359999976
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccC-------hHHHHHHHHHHHhCCceeEEE
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET-------SDTHAKMIEILANSDYLTQEF 155 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~-------~~~~~~~~~~l~~~GY~~~~~ 155 (390)
.....+ .+ ...++.++.++++. .-.+++.+-...-.. ....+.+.+.|++.|+.+...
T Consensus 114 ~~l~~~---------~~-~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 178 (219)
T 3dh0_A 114 FTFHEL---------SE-PLKFLEELKRVAKP---FAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRV 178 (219)
T ss_dssp SCGGGC---------SS-HHHHHHHHHHHEEE---EEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEE
T ss_pred hhhhhc---------CC-HHHHHHHHHHHhCC---CeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEE
Confidence 443222 22 24456666776654 345666654432211 013577888999999986544
No 101
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=96.85 E-value=0.0029 Score=57.94 Aligned_cols=104 Identities=13% Similarity=0.136 Sum_probs=68.7
Q ss_pred CCceEEeeecCchhHHHHHHhcC-CCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKAD-VSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWL 82 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG-~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~ 82 (390)
..-+||||-||.|.++..+.+.. ...-.|.|+|+++..++.-+.+... ..+++|+.++. +. ++|+++
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~---~~--~~d~v~ 144 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA---IE--NASMVV 144 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC---CC--SEEEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc---cc--ccccce
Confidence 45689999999999999887642 1111488999999998887777532 24678988874 33 378887
Q ss_pred eCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccc
Q 016377 83 LSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130 (390)
Q Consensus 83 ~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~ 130 (390)
...-.+-++ .+++..++.++.+.++- .-.+++.|.+.
T Consensus 145 ~~~~l~~~~--------~~~~~~~l~~i~~~Lkp---GG~lii~e~~~ 181 (261)
T 4gek_A 145 LNFTLQFLE--------PSERQALLDKIYQGLNP---GGALVLSEKFS 181 (261)
T ss_dssp EESCGGGSC--------HHHHHHHHHHHHHHEEE---EEEEEEEEEBC
T ss_pred eeeeeeecC--------chhHhHHHHHHHHHcCC---CcEEEEEeccC
Confidence 654322211 13345667777776654 34667777654
No 102
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=96.84 E-value=0.0015 Score=64.31 Aligned_cols=84 Identities=17% Similarity=0.146 Sum_probs=64.2
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----CCCeecCccccchhhhcccCccEEEeC
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----HRPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
...-+|+|++||.||.+.-+...+-. -.|.|+|+++.+++..+.|.. ..++++|..++... +....+|+++.-
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~-~~~~~fD~Vl~D 322 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW-CGEQQFDRILLD 322 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHH-HTTCCEEEEEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhh-cccCCCCEEEEe
Confidence 34568999999999999999886532 279999999999988888853 23467788776421 333359999999
Q ss_pred CCCchhhhccC
Q 016377 85 PPCQPYTRQGL 95 (390)
Q Consensus 85 ~PCq~fS~~g~ 95 (390)
+||.+.....+
T Consensus 323 ~Pcsg~g~~~~ 333 (429)
T 1sqg_A 323 APCSATGVIRR 333 (429)
T ss_dssp CCCCCGGGTTT
T ss_pred CCCCcccccCC
Confidence 99998876655
No 103
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=96.84 E-value=0.0016 Score=58.91 Aligned_cols=78 Identities=13% Similarity=0.049 Sum_probs=55.2
Q ss_pred CCceEEeeecCchhHHHHHHhc--CCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcc---cCc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA--DVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDM---YGA 78 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a--G~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~---~~~ 78 (390)
...+|||++||.|+++..+... +. .|.++|+++.+++.-+.|.. + .++++|+.+.-.+.+.. ..+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGW---YFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCC---eEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcc
Confidence 4568999999999988877664 43 69999999999998888753 1 34677876621112321 259
Q ss_pred cEEEeCCCCchhh
Q 016377 79 HAWLLSPPCQPYT 91 (390)
Q Consensus 79 D~l~~g~PCq~fS 91 (390)
|+++..||+-...
T Consensus 142 D~i~~npp~~~~~ 154 (254)
T 2h00_A 142 DFCMCNPPFFANQ 154 (254)
T ss_dssp SEEEECCCCC---
T ss_pred cEEEECCCCccCc
Confidence 9999999987654
No 104
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=96.83 E-value=0.013 Score=52.71 Aligned_cols=114 Identities=16% Similarity=0.122 Sum_probs=79.2
Q ss_pred CCceEEeeecCchhHHHHHHhc-C-CCccEEEEEcccHHHHHHHHHhc----C-C--CCeecCccccchhhhcccCccEE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-D-VSAQVVEAFDINDKANDVYELNF----G-H--RPYQGNIQNLTAAELDMYGAHAW 81 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G-~~~~~v~a~e~~~~a~~~~~~n~----~-~--~~~~~di~~~~~~~~~~~~~D~l 81 (390)
..-+|||+.||.|.++..+... | .. .+.++|+++.+++..+.|+ + . .++.+|+.+.. ++...+|++
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~--~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~---~~~~~~D~v 170 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKG--LVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE---LEEAAYDGV 170 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTS--EEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC---CCTTCEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCC--EEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC---CCCCCcCEE
Confidence 4568999999999999999887 4 22 6999999999988888775 2 1 34577887762 333359999
Q ss_pred EeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCcee
Q 016377 82 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLT 152 (390)
Q Consensus 82 ~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~ 152 (390)
+..+|+. ..++.++.++++. .-.+++.+... .....+++.|++.||..
T Consensus 171 ~~~~~~~---------------~~~l~~~~~~L~~---gG~l~~~~~~~-----~~~~~~~~~l~~~gf~~ 218 (258)
T 2pwy_A 171 ALDLMEP---------------WKVLEKAALALKP---DRFLVAYLPNI-----TQVLELVRAAEAHPFRL 218 (258)
T ss_dssp EEESSCG---------------GGGHHHHHHHEEE---EEEEEEEESCH-----HHHHHHHHHHTTTTEEE
T ss_pred EECCcCH---------------HHHHHHHHHhCCC---CCEEEEEeCCH-----HHHHHHHHHHHHCCCce
Confidence 9865521 2456666666554 23555555332 24678888898999864
No 105
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=96.83 E-value=0.002 Score=63.83 Aligned_cols=82 Identities=17% Similarity=0.212 Sum_probs=62.5
Q ss_pred CCceEEeeecCchhHHHHHHhc--CCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchhhhcccCccEEE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA--DVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAAELDMYGAHAWL 82 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a--G~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~~~~~~~~D~l~ 82 (390)
..-+|+|++||.||.+.-+... +-. .|+|+|+++..++..+.|.. . .++++|+.++... +....+|+++
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~--~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~-~~~~~fD~Vl 335 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKG--KIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI-IGEEVADKVL 335 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCS--EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS-SCSSCEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCC--EEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh-hccCCCCEEE
Confidence 4468999999999999998874 212 79999999999999888852 1 3456788776422 3323599999
Q ss_pred eCCCCchhhhccC
Q 016377 83 LSPPCQPYTRQGL 95 (390)
Q Consensus 83 ~g~PCq~fS~~g~ 95 (390)
..+||.++....+
T Consensus 336 ~D~Pcsg~g~~~~ 348 (450)
T 2yxl_A 336 LDAPCTSSGTIGK 348 (450)
T ss_dssp EECCCCCGGGTTT
T ss_pred EcCCCCCCeeecc
Confidence 9999998877654
No 106
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=96.83 E-value=0.00078 Score=65.65 Aligned_cols=107 Identities=9% Similarity=0.040 Sum_probs=70.4
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCc-------------------------------------cEEEEEcccHHHHHHHH
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSA-------------------------------------QVVEAFDINDKANDVYE 53 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~-------------------------------------~~v~a~e~~~~a~~~~~ 53 (390)
..-.++|.|||.|++.+.+...+.+. ..|+++|+|+.+++.-+
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 34679999999999887666543220 13999999999999999
Q ss_pred HhcC-----C--CCeecCccccchhhhcccCccEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEE
Q 016377 54 LNFG-----H--RPYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126 (390)
Q Consensus 54 ~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ 126 (390)
.|.. + .++++|+.++... . .+|+++..||- |.+.+...+...|+..+.+.++.+ ..-.++++
T Consensus 281 ~Na~~~gl~~~I~~~~~D~~~~~~~---~-~fD~Iv~NPPY------g~rl~~~~~l~~ly~~lg~~lk~~-~g~~~~ii 349 (393)
T 3k0b_A 281 QNAVEAGLGDLITFRQLQVADFQTE---D-EYGVVVANPPY------GERLEDEEAVRQLYREMGIVYKRM-PTWSVYVL 349 (393)
T ss_dssp HHHHHTTCTTCSEEEECCGGGCCCC---C-CSCEEEECCCC------CCSHHHHHHHHHHHHHHHHHHHTC-TTCEEEEE
T ss_pred HHHHHcCCCCceEEEECChHhCCCC---C-CCCEEEECCCC------ccccCCchhHHHHHHHHHHHHhcC-CCCEEEEE
Confidence 8853 2 2467898887542 2 49999999992 333221223345666666666654 23444554
Q ss_pred ec
Q 016377 127 EN 128 (390)
Q Consensus 127 EN 128 (390)
-.
T Consensus 350 t~ 351 (393)
T 3k0b_A 350 TS 351 (393)
T ss_dssp EC
T ss_pred EC
Confidence 33
No 107
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=96.82 E-value=0.014 Score=52.38 Aligned_cols=147 Identities=14% Similarity=0.153 Sum_probs=87.3
Q ss_pred CCCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHH---hcCC-CCeecCccccch-hhhcccCccEEEe
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYEL---NFGH-RPYQGNIQNLTA-AELDMYGAHAWLL 83 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~---n~~~-~~~~~di~~~~~-~~~~~~~~D~l~~ 83 (390)
...-+|||+.||.|+.+.-+.+. |-+. .|+|+|+++...+.... ..++ .++++|++.... ..+.+ .+|+++.
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G-~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~-~~D~I~~ 152 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNG-KAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVE-NVDVLYV 152 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTS-EEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCC-CEEEEEE
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCC-EEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhcccc-ceEEEEe
Confidence 34578999999999999888753 3211 69999999977533221 1222 456789887543 22233 5999987
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecccc----ccChHHHHHHHHHHHhCCceeEEEEeCC
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG----FETSDTHAKMIEILANSDYLTQEFILSP 159 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~----~~~~~~~~~~~~~l~~~GY~~~~~~l~a 159 (390)
..+ ..+....+.....++++. .=.+++..--.- +-....++..+..|++.||.+...+
T Consensus 153 d~a------------~~~~~~il~~~~~~~Lkp---GG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~--- 214 (232)
T 3id6_C 153 DIA------------QPDQTDIAIYNAKFFLKV---NGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQII--- 214 (232)
T ss_dssp CCC------------CTTHHHHHHHHHHHHEEE---EEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEE---
T ss_pred cCC------------ChhHHHHHHHHHHHhCCC---CeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEe---
Confidence 654 123333333333334443 234444421111 1111246778889999998877665
Q ss_pred CCcCCCccCcEEEEEEEeC
Q 016377 160 LQFGVPYSRPRYFCLAKRK 178 (390)
Q Consensus 160 ~~~G~pq~R~R~~~i~~~~ 178 (390)
+. .|..|..++++|.++
T Consensus 215 -~l-~p~~~~h~~v~~~~~ 231 (232)
T 3id6_C 215 -NL-DPYDKDHAIVLSKYK 231 (232)
T ss_dssp -EC-TTTCSSCEEEEEEEC
T ss_pred -cc-CCCcCceEEEEEEeC
Confidence 22 477788888888764
No 108
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=96.80 E-value=0.0085 Score=53.31 Aligned_cols=71 Identities=14% Similarity=0.061 Sum_probs=57.1
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC---CCeecCccccchhhhcccCccEEEeCCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH---RPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~---~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
...+|||+.||.|.++..+...|.. .+.++|+++.+++..+.+... ..+.+|+.++. ++...+|+++....
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~ 116 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGAS--YVLGLDLSEKMLARARAAGPDTGITYERADLDKLH---LPQDSFDLAYSSLA 116 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCC---CCTTCEEEEEEESC
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCC--eEEEEcCCHHHHHHHHHhcccCCceEEEcChhhcc---CCCCCceEEEEecc
Confidence 4569999999999999999999874 699999999999999998865 34677887764 33335999997654
No 109
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=96.79 E-value=0.0044 Score=57.05 Aligned_cols=91 Identities=11% Similarity=-0.008 Sum_probs=66.0
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----CCeecCccccchhhhcccCccEEEeCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
...+|||+.||.|.++..+...|. .|.++|+++.+++..+.+... .++++|+.++.. ...+|+++...
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~----~~~fD~i~~~~ 192 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI----QENYDFIVSTV 192 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC----CSCEEEEEECS
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc----cCCccEEEEcc
Confidence 467899999999999999999986 489999999999988887642 346788887654 22599999887
Q ss_pred CCchhhhccCCCCCCChhhhhHHHHHHhccc
Q 016377 86 PCQPYTRQGLQKQSSDARAFSFLKILELIPH 116 (390)
Q Consensus 86 PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~ 116 (390)
+..-++ .+....++.++.++++.
T Consensus 193 ~~~~~~--------~~~~~~~l~~~~~~Lkp 215 (286)
T 3m70_A 193 VFMFLN--------RERVPSIIKNMKEHTNV 215 (286)
T ss_dssp SGGGSC--------GGGHHHHHHHHHHTEEE
T ss_pred chhhCC--------HHHHHHHHHHHHHhcCC
Confidence 654332 12233456666665543
No 110
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=96.79 E-value=0.0096 Score=55.71 Aligned_cols=151 Identities=13% Similarity=0.152 Sum_probs=90.3
Q ss_pred CCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcC---------C-CCeecCccccchhhhcccCcc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFG---------H-RPYQGNIQNLTAAELDMYGAH 79 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~---------~-~~~~~di~~~~~~~~~~~~~D 79 (390)
...+|||+-||.|++...+.+. +.. .|.++|+|+.+++..+.+++ . .++.+|+.++... .....+|
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~-~~~~~fD 171 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVE--HCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQ-TPDNTYD 171 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCC--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHS-SCTTCEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHh-ccCCcee
Confidence 3468999999999999998876 333 79999999999999888873 1 3467788765321 1122599
Q ss_pred EEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCc-EEEEeccccccChHHHHHHHHHHHhCCce-eEEEEe
Q 016377 80 AWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH-MLFVENVVGFETSDTHAKMIEILANSDYL-TQEFIL 157 (390)
Q Consensus 80 ~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~-~~~~ENV~~~~~~~~~~~~~~~l~~~GY~-~~~~~l 157 (390)
+|+..++... +....+. ...++..+.+++ +|. ++++..-..+......+.+.+.|++.|+. +.....
T Consensus 172 vIi~d~~~~~----~~~~~l~--~~~~l~~~~~~L-----kpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 172 VVIIDTTDPA----GPASKLF--GEAFYKDVLRIL-----KPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALM 240 (304)
T ss_dssp EEEEECC-------------C--CHHHHHHHHHHE-----EEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred EEEECCCCcc----ccchhhh--HHHHHHHHHHhc-----CCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEe
Confidence 9998765421 1100000 012333444433 453 33333222234445678899999999985 333333
Q ss_pred CCCCcCCCccCcEEEEEEEeC
Q 016377 158 SPLQFGVPYSRPRYFCLAKRK 178 (390)
Q Consensus 158 ~a~~~G~pq~R~R~~~i~~~~ 178 (390)
....| | .-...|++|+++
T Consensus 241 ~vP~y--p-~g~w~f~~as~~ 258 (304)
T 3bwc_A 241 HVPTY--P-CGSIGTLVCSKK 258 (304)
T ss_dssp CCTTS--T-TSCCEEEEEESS
T ss_pred ecccc--c-CcceEEEEEeCC
Confidence 33333 1 234678888875
No 111
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=96.79 E-value=0.0065 Score=55.16 Aligned_cols=144 Identities=13% Similarity=0.063 Sum_probs=87.7
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchhhhcccCccEEEe
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
...-+|+|+.||.|..++.+....- ...|.++|+++.+++..+.|.. + .++++|+.++...+.....+|+++.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRP-ELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEE
Confidence 3456899999999998888876521 1168999999999999888853 1 3467888777543211225999985
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEEEEeCCCCcC
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFG 163 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l~a~~~G 163 (390)
.. ..+ ...++....++++. .-.++++... ........+...++.+|+.+.... .+.
T Consensus 158 ~a-------------~~~-~~~ll~~~~~~Lkp---gG~l~~~~g~---~~~~e~~~~~~~l~~~G~~~~~~~----~~~ 213 (249)
T 3g89_A 158 RA-------------VAP-LCVLSELLLPFLEV---GGAAVAMKGP---RVEEELAPLPPALERLGGRLGEVL----ALQ 213 (249)
T ss_dssp ES-------------SCC-HHHHHHHHGGGEEE---EEEEEEEECS---CCHHHHTTHHHHHHHHTEEEEEEE----EEE
T ss_pred CC-------------cCC-HHHHHHHHHHHcCC---CeEEEEEeCC---CcHHHHHHHHHHHHHcCCeEEEEE----Eee
Confidence 21 111 12334444444433 2355665543 122345667777888898775533 334
Q ss_pred CCc-cCcEEEEEEEeC
Q 016377 164 VPY-SRPRYFCLAKRK 178 (390)
Q Consensus 164 ~pq-~R~R~~~i~~~~ 178 (390)
+|. .-.|..++..+.
T Consensus 214 ~p~~~~~R~l~~~~k~ 229 (249)
T 3g89_A 214 LPLSGEARHLVVLEKT 229 (249)
T ss_dssp CTTTCCEEEEEEEEEC
T ss_pred CCCCCCcEEEEEEEeC
Confidence 554 235666655543
No 112
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=96.77 E-value=0.001 Score=64.70 Aligned_cols=106 Identities=11% Similarity=0.129 Sum_probs=69.6
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCc-------------------------------------cEEEEEcccHHHHHHHH
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSA-------------------------------------QVVEAFDINDKANDVYE 53 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~-------------------------------------~~v~a~e~~~~a~~~~~ 53 (390)
..-+++|+|||.|++.+.+...+.+. ..|+++|+|+.+++.-+
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 45689999999999888776543210 24999999999999999
Q ss_pred HhcCC-------CCeecCccccchhhhcccCccEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEE
Q 016377 54 LNFGH-------RPYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV 126 (390)
Q Consensus 54 ~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ 126 (390)
.|... .+.++|+.++... . .+|+++..||= |.+.+...+...++.++.+.++.+ ..-.++++
T Consensus 275 ~Na~~~gl~~~i~~~~~D~~~l~~~---~-~~D~Iv~NPPy------g~rl~~~~~l~~ly~~lg~~lk~~-~g~~~~ii 343 (385)
T 3ldu_A 275 ENAEIAGVDEYIEFNVGDATQFKSE---D-EFGFIITNPPY------GERLEDKDSVKQLYKELGYAFRKL-KNWSYYLI 343 (385)
T ss_dssp HHHHHHTCGGGEEEEECCGGGCCCS---C-BSCEEEECCCC------CCSHHHHHHHHHHHHHHHHHHHTS-BSCEEEEE
T ss_pred HHHHHcCCCCceEEEECChhhcCcC---C-CCcEEEECCCC------cCccCCHHHHHHHHHHHHHHHhhC-CCCEEEEE
Confidence 88531 2467888887542 2 49999999992 332221223345666666666553 12344444
Q ss_pred e
Q 016377 127 E 127 (390)
Q Consensus 127 E 127 (390)
-
T Consensus 344 t 344 (385)
T 3ldu_A 344 T 344 (385)
T ss_dssp E
T ss_pred E
Confidence 3
No 113
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=96.76 E-value=0.0046 Score=56.23 Aligned_cols=118 Identities=16% Similarity=0.074 Sum_probs=78.6
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----CCeecCccccchhhhcccCccEEEeCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
..-+|+|+.||.|.++..+...|. .|.++|+++.+++.-+.|... .++.+|+.+. ++...+|++++.+
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~----~~~~~fD~Vv~n~ 192 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA----LPFGPFDLLVANL 192 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH----GGGCCEEEEEEEC
T ss_pred CCCEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc----CcCCCCCEEEECC
Confidence 356899999999999999999885 699999999999988888642 2345565542 3233599999876
Q ss_pred CCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEEEE
Q 016377 86 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFI 156 (390)
Q Consensus 86 PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~ 156 (390)
+... ...++.++.++++. .-.+++.+... .....+.+.+++.||.+....
T Consensus 193 ~~~~-------------~~~~l~~~~~~Lkp---gG~lils~~~~-----~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 193 YAEL-------------HAALAPRYREALVP---GGRALLTGILK-----DRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp CHHH-------------HHHHHHHHHHHEEE---EEEEEEEEEEG-----GGHHHHHHHHHHTTCEEEEEE
T ss_pred cHHH-------------HHHHHHHHHHHcCC---CCEEEEEeecc-----CCHHHHHHHHHHCCCEEEEEe
Confidence 5321 12344555554433 22344433222 136778888999999886543
No 114
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=96.75 E-value=0.003 Score=61.06 Aligned_cols=104 Identities=16% Similarity=0.129 Sum_probs=67.5
Q ss_pred ceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CC--eecCccccchhhhcccCccEEEe
Q 016377 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RP--YQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 13 ~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~--~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
-+|+|++||.|.+++.+...+- ...|.++|+++.+++.-+.|... .+ +.+|+.+. ++...+|+++.
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~----~~~~~fD~Ii~ 298 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG----VEPFRFNAVLC 298 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT----CCTTCEEEEEE
T ss_pred CeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc----CCCCCeeEEEE
Confidence 6899999999999999998852 12699999999999988888642 12 56777662 33335999999
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecc
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV 129 (390)
.||........ .+....++.++.++++. .-.++++-|-
T Consensus 299 nppfh~~~~~~-----~~~~~~~l~~~~~~Lkp---gG~l~iv~n~ 336 (375)
T 4dcm_A 299 NPPFHQQHALT-----DNVAWEMFHHARRCLKI---NGELYIVANR 336 (375)
T ss_dssp CCCC------------CCHHHHHHHHHHHHEEE---EEEEEEEEET
T ss_pred CCCcccCcccC-----HHHHHHHHHHHHHhCCC---CcEEEEEEEC
Confidence 99964321111 12223455556665554 3456665443
No 115
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=96.75 E-value=0.0088 Score=52.17 Aligned_cols=128 Identities=14% Similarity=-0.048 Sum_probs=83.1
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhc-CC-CCeecCccccchhhhcccCccEEEeCCCCc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-GH-RPYQGNIQNLTAAELDMYGAHAWLLSPPCQ 88 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~-~~-~~~~~di~~~~~~~~~~~~~D~l~~g~PCq 88 (390)
..-+|||+.||.|.++..+...|. .+.++|+++.+++..+.+. +. ..+.+|+.++ +....+|+++.+.-..
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~----~~~~~~D~v~~~~~l~ 118 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGLAD---RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW----TPDRQWDAVFFAHWLA 118 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC----CCSSCEEEEEEESCGG
T ss_pred CCCeEEEECCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHhcCCCCeEEEecccccC----CCCCceeEEEEechhh
Confidence 345999999999999999999875 4889999999999888743 22 3467888876 2333599999754221
Q ss_pred hhhhccCCCCCCCh-hhhhHHHHHHhcccccCCCcEEEEeccccc------------------cC----------hHHHH
Q 016377 89 PYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVVGF------------------ET----------SDTHA 139 (390)
Q Consensus 89 ~fS~~g~~~~~~d~-r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~------------------~~----------~~~~~ 139 (390)
. ..++ ...++.++.++++. .-.+++.+..+.- +. .....
T Consensus 119 ~---------~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (218)
T 3ou2_A 119 H---------VPDDRFEAFWESVRSAVAP---GGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPA 186 (218)
T ss_dssp G---------SCHHHHHHHHHHHHHHEEE---EEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHH
T ss_pred c---------CCHHHHHHHHHHHHHHcCC---CeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHH
Confidence 1 1222 34556666666553 2345555442210 00 00246
Q ss_pred HHHHHHHhCCceeEEEEe
Q 016377 140 KMIEILANSDYLTQEFIL 157 (390)
Q Consensus 140 ~~~~~l~~~GY~~~~~~l 157 (390)
.+.+.|++.|+.+.....
T Consensus 187 ~~~~~l~~aGf~v~~~~~ 204 (218)
T 3ou2_A 187 ELTERLTALGWSCSVDEV 204 (218)
T ss_dssp HHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHCCCEEEeeec
Confidence 788889999999765544
No 116
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=96.74 E-value=0.0066 Score=52.90 Aligned_cols=124 Identities=16% Similarity=0.230 Sum_probs=81.7
Q ss_pred eEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEEeCC
Q 016377 14 RVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 14 ~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
+|||+.||.|.++..+... |. .+.++|+++.+++..+.+... .++++|+.++. ++...+|+++...
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~D~v~~~~ 119 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSDF---SIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP---IEDNYADLIVSRG 119 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSEE---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS---SCTTCEEEEEEES
T ss_pred EEEEECCCCCHHHHHHHHcCCC---eEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC---CCcccccEEEECc
Confidence 9999999999999999887 43 589999999999888888431 34678888764 3333599999875
Q ss_pred CCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccc------------------------cChHHHHHH
Q 016377 86 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF------------------------ETSDTHAKM 141 (390)
Q Consensus 86 PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~------------------------~~~~~~~~~ 141 (390)
....+ ++...++.++.++++. .-.+++.+....- ......+.+
T Consensus 120 ~l~~~----------~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (219)
T 3dlc_A 120 SVFFW----------EDVATAFREIYRILKS---GGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERF 186 (219)
T ss_dssp CGGGC----------SCHHHHHHHHHHHEEE---EEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHH
T ss_pred hHhhc----------cCHHHHHHHHHHhCCC---CCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHH
Confidence 43332 2223456666666553 2344554332111 011123678
Q ss_pred HHHHHhCCceeEEEE
Q 016377 142 IEILANSDYLTQEFI 156 (390)
Q Consensus 142 ~~~l~~~GY~~~~~~ 156 (390)
.+.|++.|+.+....
T Consensus 187 ~~~l~~aGf~~v~~~ 201 (219)
T 3dlc_A 187 QNVLDEIGISSYEII 201 (219)
T ss_dssp HHHHHHHTCSSEEEE
T ss_pred HHHHHHcCCCeEEEE
Confidence 888999999765544
No 117
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=96.73 E-value=0.015 Score=54.15 Aligned_cols=142 Identities=9% Similarity=0.054 Sum_probs=89.5
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCCC--eecCccccchhhhcccCccEEEeCCCCc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRP--YQGNIQNLTAAELDMYGAHAWLLSPPCQ 88 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~--~~~di~~~~~~~~~~~~~D~l~~g~PCq 88 (390)
...++||+-||.|+++..+.+.|.. .|+|+|+++...+.-..+.+... -..|++.+..++++...+|+++...-..
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~--~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~ 162 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAK--LVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFI 162 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCS--EEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSS
T ss_pred cccEEEecCCCccHHHHHHHhCCCC--EEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHh
Confidence 4568999999999999999888865 89999999876655334444322 2357777777666653389888643211
Q ss_pred hhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEE---------ecc--ccccChH-----HHHHHHHHHHhCCcee
Q 016377 89 PYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV---------ENV--VGFETSD-----THAKMIEILANSDYLT 152 (390)
Q Consensus 89 ~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~---------ENV--~~~~~~~-----~~~~~~~~l~~~GY~~ 152 (390)
+ -...+.++.++++- .-.++++ |.| .|..... ..+.+.+.+...|+.+
T Consensus 163 ------------s-l~~vL~e~~rvLkp---GG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v 226 (291)
T 3hp7_A 163 ------------S-LNLILPALAKILVD---GGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSV 226 (291)
T ss_dssp ------------C-GGGTHHHHHHHSCT---TCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEE
T ss_pred ------------h-HHHHHHHHHHHcCc---CCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEE
Confidence 1 13467777786664 3456665 222 1333221 3566788889999988
Q ss_pred EEEEeCCCCcCCCccCcEE
Q 016377 153 QEFILSPLQFGVPYSRPRY 171 (390)
Q Consensus 153 ~~~~l~a~~~G~pq~R~R~ 171 (390)
........ -|---+++-+
T Consensus 227 ~~~~~spi-~g~~gn~e~l 244 (291)
T 3hp7_A 227 KGLDFSPI-QGGHGNIEFL 244 (291)
T ss_dssp EEEEECSS-CCGGGCCCEE
T ss_pred EEEEECCC-CCCCcCHHHH
Confidence 77554433 2433344433
No 118
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=96.73 E-value=0.0093 Score=53.07 Aligned_cols=126 Identities=10% Similarity=0.014 Sum_probs=82.8
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC---CCeecCccccchhhhcccCccEEEeCCCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH---RPYQGNIQNLTAAELDMYGAHAWLLSPPC 87 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~---~~~~~di~~~~~~~~~~~~~D~l~~g~PC 87 (390)
...+|||+.||.|.++..+...|. .+.++|+++.+++..+.+... ..+++|+.++. ++...+|+++....-
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l 126 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGY---KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLP---FENEQFEAIMAINSL 126 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCS---SCTTCEEEEEEESCT
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCC---CCCCCccEEEEcChH
Confidence 456999999999999999999986 488999999999999888533 34678888764 333359999964332
Q ss_pred chhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccCh----------------HHHHHHHHHHHhCCce
Q 016377 88 QPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS----------------DTHAKMIEILANSDYL 151 (390)
Q Consensus 88 q~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~----------------~~~~~~~~~l~~~GY~ 151 (390)
. ...+. ..++.++.++++. .-.+++....+..... .....+.+.|++.|+.
T Consensus 127 ~---------~~~~~-~~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 193 (242)
T 3l8d_A 127 E---------WTEEP-LRALNEIKRVLKS---DGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFK 193 (242)
T ss_dssp T---------SSSCH-HHHHHHHHHHEEE---EEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEE
T ss_pred h---------hccCH-HHHHHHHHHHhCC---CeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCE
Confidence 1 12232 3456666665554 2344444422211100 0235788889999998
Q ss_pred eEEE
Q 016377 152 TQEF 155 (390)
Q Consensus 152 ~~~~ 155 (390)
+...
T Consensus 194 ~~~~ 197 (242)
T 3l8d_A 194 VVDG 197 (242)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7643
No 119
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=96.72 E-value=0.003 Score=58.11 Aligned_cols=130 Identities=16% Similarity=0.178 Sum_probs=80.7
Q ss_pred CCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
...+|+|++||.|.++..+... +.. .+.++|+++.+++..+.|.. . .++++|+.+. +....+|+++.
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~--~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~----~~~~~fD~Iv~ 182 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDC--EIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA----LAGQQFAMIVS 182 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTS--EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG----GTTCCEEEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh----cccCCccEEEE
Confidence 4568999999999999988854 322 69999999999999988863 1 3456777663 21225999999
Q ss_pred CCCCchhhhccCCCC--CCChhh---------hhHHHHHHhcc-cccCCC-cEEEEeccccccChHHHHHHHHHHHhCCc
Q 016377 84 SPPCQPYTRQGLQKQ--SSDARA---------FSFLKILELIP-HTVKPP-HMLFVENVVGFETSDTHAKMIEILANSDY 150 (390)
Q Consensus 84 g~PCq~fS~~g~~~~--~~d~r~---------~l~~~~~~~i~-~~~~~P-~~~~~ENV~~~~~~~~~~~~~~~l~~~GY 150 (390)
.|||.+.+......+ ..++.. ..+..+++-+. .+ +| -++++|. +..+ ...+.+.|++.||
T Consensus 183 npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~L--kpgG~l~~~~--~~~~---~~~~~~~l~~~Gf 255 (276)
T 2b3t_A 183 NPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNAL--VSGGFLLLEH--GWQQ---GEAVRQAFILAGY 255 (276)
T ss_dssp CCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGE--EEEEEEEEEC--CSSC---HHHHHHHHHHTTC
T ss_pred CCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhc--CCCCEEEEEE--CchH---HHHHHHHHHHCCC
Confidence 999987643110000 011111 12334443333 33 45 3566663 2222 4566777888998
Q ss_pred eeE
Q 016377 151 LTQ 153 (390)
Q Consensus 151 ~~~ 153 (390)
...
T Consensus 256 ~~v 258 (276)
T 2b3t_A 256 HDV 258 (276)
T ss_dssp TTC
T ss_pred cEE
Confidence 643
No 120
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=96.71 E-value=0.02 Score=50.21 Aligned_cols=70 Identities=14% Similarity=0.150 Sum_probs=53.5
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----------CCeecCccccchhhhcccCcc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----------RPYQGNIQNLTAAELDMYGAH 79 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----------~~~~~di~~~~~~~~~~~~~D 79 (390)
...+|||+.||.|.++..+...+- ...+.++|+++.+++..+.+... ..+++|+..... ....+|
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~fD 104 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDK---RFSGYD 104 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCG---GGTTCS
T ss_pred CCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccccc---ccCCCC
Confidence 356999999999999999998763 13699999999999999988642 346778755432 222599
Q ss_pred EEEeC
Q 016377 80 AWLLS 84 (390)
Q Consensus 80 ~l~~g 84 (390)
+++..
T Consensus 105 ~V~~~ 109 (219)
T 3jwg_A 105 AATVI 109 (219)
T ss_dssp EEEEE
T ss_pred EEEEH
Confidence 99965
No 121
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=96.69 E-value=0.0053 Score=54.53 Aligned_cols=114 Identities=18% Similarity=0.070 Sum_probs=77.6
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhhc-ccCccEEEeCCCCc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELD-MYGAHAWLLSPPCQ 88 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~~-~~~~D~l~~g~PCq 88 (390)
...+|||+.||.|.++.-+...|. .|.++|+++.+++..+.|.+. .++++|+.+..+ +. ...+|+++..+
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~--~~~~~~fD~v~~~~--- 119 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAA---RWAAYDFSPELLKLARANAPHADVYEWNGKGELP--AGLGAPFGLIVSRR--- 119 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCC--TTCCCCEEEEEEES---
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhCCCceEEEcchhhccC--CcCCCCEEEEEeCC---
Confidence 456899999999999999999875 589999999999999999765 457788854322 22 23599998651
Q ss_pred hhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEE
Q 016377 89 PYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQE 154 (390)
Q Consensus 89 ~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~ 154 (390)
+...++.++.++ + +|.=.++ -+.+..+ ...+.+.|.+.|+.+..
T Consensus 120 -------------~~~~~l~~~~~~---L--kpgG~l~-~~~~~~~---~~~~~~~l~~~Gf~~~~ 163 (226)
T 3m33_A 120 -------------GPTSVILRLPEL---A--APDAHFL-YVGPRLN---VPEVPERLAAVGWDIVA 163 (226)
T ss_dssp -------------CCSGGGGGHHHH---E--EEEEEEE-EEESSSC---CTHHHHHHHHTTCEEEE
T ss_pred -------------CHHHHHHHHHHH---c--CCCcEEE-EeCCcCC---HHHHHHHHHHCCCeEEE
Confidence 112334455554 3 4655555 2222222 45677888889987543
No 122
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.67 E-value=0.032 Score=51.48 Aligned_cols=147 Identities=12% Similarity=0.079 Sum_probs=86.6
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhc-------------CC---CCeecCccccchhhhcc
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-------------GH---RPYQGNIQNLTAAELDM 75 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~-------------~~---~~~~~di~~~~~~~~~~ 75 (390)
.-+|||+.||.|++...+...|.. .+.++|+|+..++.-+.|+ .. .++.+|..+.... .
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~--~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~--~- 150 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDVD--EVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN--N- 150 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCCS--EEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH--C-
T ss_pred CCeEEEEcCCcCHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc--c-
Confidence 468999999999999999877644 8999999999999988887 11 2356676654322 2
Q ss_pred cCccEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCc-EEEEeccccccChHHHHHHHHHHHhCCceeEE
Q 016377 76 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH-MLFVENVVGFETSDTHAKMIEILANSDYLTQE 154 (390)
Q Consensus 76 ~~~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~-~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~ 154 (390)
..+|+|+..+|+. ++ ....+. ...++..+.++ + +|. +++++...-......+..+.+.+.+..=.+..
T Consensus 151 ~~fD~Ii~d~~~~-~~---~~~~l~--~~~~l~~~~~~---L--~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~ 219 (281)
T 1mjf_A 151 RGFDVIIADSTDP-VG---PAKVLF--SEEFYRYVYDA---L--NNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYY 219 (281)
T ss_dssp CCEEEEEEECCCC-C--------TT--SHHHHHHHHHH---E--EEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEE
T ss_pred CCeeEEEECCCCC-CC---cchhhh--HHHHHHHHHHh---c--CCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEE
Confidence 2599999988863 21 111110 12233333343 3 454 34443222223445667777777765323333
Q ss_pred EEeCCCCcCCCccCcEEEEEEEeC
Q 016377 155 FILSPLQFGVPYSRPRYFCLAKRK 178 (390)
Q Consensus 155 ~~l~a~~~G~pq~R~R~~~i~~~~ 178 (390)
....-..| .....|++|++.
T Consensus 220 ~~~~vP~~----~g~~~~~~as~~ 239 (281)
T 1mjf_A 220 YSFPVIGY----ASPWAFLVGVKG 239 (281)
T ss_dssp EEECCTTS----SSSEEEEEEEES
T ss_pred EEEecCCC----CceEEEEEeeCC
Confidence 22221222 245778888875
No 123
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=96.66 E-value=0.0073 Score=54.51 Aligned_cols=158 Identities=7% Similarity=0.030 Sum_probs=90.6
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------------------------------
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH------------------------------- 58 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~------------------------------- 58 (390)
....+|||+-||.|.++.-+...|.. .|.++|+++.+++..+.+...
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFT--EIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEE--EEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccC--eEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 34578999999999999888888863 699999999999888877654
Q ss_pred -----CCeecCccccch-hhhcccCccEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecccc-
Q 016377 59 -----RPYQGNIQNLTA-AELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG- 131 (390)
Q Consensus 59 -----~~~~~di~~~~~-~~~~~~~~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~- 131 (390)
..+.+|+.+..+ .+.....+|+++...--..++ . . ......++.++.++++- .-.+++.+-...
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~---~--~-~~~~~~~l~~~~~~Lkp---gG~li~~~~~~~~ 203 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAAC---P--D-LPAYRTALRNLGSLLKP---GGFLVMVDALKSS 203 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHC---S--S-HHHHHHHHHHHHTTEEE---EEEEEEEEESSCC
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhc---C--C-hHHHHHHHHHHHhhCCC---CcEEEEEecCCCc
Confidence 235677777653 222113599999754311111 0 0 01223344445444432 123333331110
Q ss_pred ---------ccChHHHHHHHHHHHhCCceeEEEEeCCCCcCC--CccCcEEEEEEEeC
Q 016377 132 ---------FETSDTHAKMIEILANSDYLTQEFILSPLQFGV--PYSRPRYFCLAKRK 178 (390)
Q Consensus 132 ---------~~~~~~~~~~~~~l~~~GY~~~~~~l~a~~~G~--pq~R~R~~~i~~~~ 178 (390)
....-..+.+.+.|++.|+.+.........|.. ......++++|.+.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~ 261 (265)
T 2i62_A 204 YYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKP 261 (265)
T ss_dssp EEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEECC
T ss_pred eEEcCCccccccccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEeccc
Confidence 000002457888999999987665544433322 22334556666554
No 124
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=96.66 E-value=0.0019 Score=59.97 Aligned_cols=73 Identities=18% Similarity=0.156 Sum_probs=59.7
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
..-+|||+.||.|.++..+.+.|. .|.++|+|+..++..+.+... .++++|+.+++ ++ .+|++++
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~---~~--~fD~vv~ 99 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEKAK---KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTD---LP--FFDTCVA 99 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHSS---EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSC---CC--CCSEEEE
T ss_pred CCCEEEEEcCcccHHHHHHHhhCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceeccc---ch--hhcEEEE
Confidence 445899999999999999998874 599999999999998888742 35678888763 33 3899999
Q ss_pred CCCCchhh
Q 016377 84 SPPCQPYT 91 (390)
Q Consensus 84 g~PCq~fS 91 (390)
.+|++..|
T Consensus 100 nlpy~~~~ 107 (285)
T 1zq9_A 100 NLPYQISS 107 (285)
T ss_dssp ECCGGGHH
T ss_pred ecCcccch
Confidence 99987654
No 125
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=96.65 E-value=0.011 Score=51.73 Aligned_cols=72 Identities=17% Similarity=0.242 Sum_probs=54.2
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----------CCeecCccccchhhhcccCcc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----------RPYQGNIQNLTAAELDMYGAH 79 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----------~~~~~di~~~~~~~~~~~~~D 79 (390)
...+|||+.||.|.++..+.+.+. ...+.++|+++.+++..+.+... ..+++|+..... ....+|
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~fD 104 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDK---RFHGYD 104 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCG---GGCSCS
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccc---cCCCcC
Confidence 346999999999999999998764 23799999999999999998752 345677755432 222599
Q ss_pred EEEeCCC
Q 016377 80 AWLLSPP 86 (390)
Q Consensus 80 ~l~~g~P 86 (390)
+++....
T Consensus 105 ~v~~~~~ 111 (217)
T 3jwh_A 105 AATVIEV 111 (217)
T ss_dssp EEEEESC
T ss_pred EEeeHHH
Confidence 9996543
No 126
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=96.65 E-value=0.012 Score=52.84 Aligned_cols=143 Identities=8% Similarity=-0.014 Sum_probs=83.4
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchh-hhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAA-ELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~-~~~~~~~D~l~~ 83 (390)
..-+|||+.||.|..++.+....- ...|.++|+++.+++..+.|.. + .++++|+.++... ... ..+|+++.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~fD~V~~ 147 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFP-HLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVR-ESYDIVTA 147 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTT-TCEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhccccccc-CCccEEEE
Confidence 345899999999998888875321 1159999999999888877642 2 3467888776421 112 25999996
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEEEEeCCCCcC
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFG 163 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l~a~~~G 163 (390)
.. ..+ ...++..+.++++. .-.++++ .+.........+.+.++..|+.+.... .|.
T Consensus 148 ~~-------------~~~-~~~~l~~~~~~Lkp---gG~l~~~---~g~~~~~~~~~~~~~l~~~g~~~~~~~----~~~ 203 (240)
T 1xdz_A 148 RA-------------VAR-LSVLSELCLPLVKK---NGLFVAL---KAASAEEELNAGKKAITTLGGELENIH----SFK 203 (240)
T ss_dssp EC-------------CSC-HHHHHHHHGGGEEE---EEEEEEE---ECC-CHHHHHHHHHHHHHTTEEEEEEE----EEE
T ss_pred ec-------------cCC-HHHHHHHHHHhcCC---CCEEEEE---eCCCchHHHHHHHHHHHHcCCeEeEEE----EEe
Confidence 32 111 22333333343332 1233333 232233346678888999999775432 112
Q ss_pred CCc-cCcEEEEEEEeCC
Q 016377 164 VPY-SRPRYFCLAKRKP 179 (390)
Q Consensus 164 ~pq-~R~R~~~i~~~~~ 179 (390)
+|. ...|.+++..+..
T Consensus 204 ~~~~~~~~~l~~~~k~~ 220 (240)
T 1xdz_A 204 LPIEESDRNIMVIRKIK 220 (240)
T ss_dssp CTTTCCEEEEEEEEECS
T ss_pred cCCCCCceEEEEEEecC
Confidence 443 2346666665543
No 127
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=96.64 E-value=0.004 Score=58.34 Aligned_cols=79 Identities=11% Similarity=0.165 Sum_probs=58.9
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----CCeecCccccchhhhcc---cCccEEE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RPYQGNIQNLTAAELDM---YGAHAWL 82 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----~~~~~di~~~~~~~~~~---~~~D~l~ 82 (390)
..-++||++||.||.+..+....- ...|+++|+|+.+++.-+.|... .++++|..++... +.+ ..+|.++
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~-l~~~g~~~~D~Vl 103 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL-LKTLGIEKVDGIL 103 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH-HHHTTCSCEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHH-HHhcCCCCCCEEE
Confidence 345899999999999999987631 12699999999999998888642 3567888876421 211 2599999
Q ss_pred eCCCCchhh
Q 016377 83 LSPPCQPYT 91 (390)
Q Consensus 83 ~g~PCq~fS 91 (390)
..+||..+-
T Consensus 104 ~D~gvSs~q 112 (301)
T 1m6y_A 104 MDLGVSTYQ 112 (301)
T ss_dssp EECSCCHHH
T ss_pred EcCccchhh
Confidence 999986543
No 128
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=96.58 E-value=0.021 Score=52.71 Aligned_cols=149 Identities=14% Similarity=0.096 Sum_probs=91.5
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC----------CCeecCccccchhhhcccCccE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH----------RPYQGNIQNLTAAELDMYGAHA 80 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~----------~~~~~di~~~~~~~~~~~~~D~ 80 (390)
..-+|||+-||.|++...+....- ...+.++|+|+..++.-+.+++. .++.+|+.+..... ...+|+
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~--~~~fD~ 154 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV--TNTYDV 154 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC--CSCEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC--CCCceE
Confidence 346899999999999998876531 23799999999999999999863 24567776643221 225999
Q ss_pred EEeCCCCchhhhccCCCCCCChhhhhH-HHHHHhcc-cccCCCcEEEEecccc-ccChHHHHHHHHHHHhCCceeEEEEe
Q 016377 81 WLLSPPCQPYTRQGLQKQSSDARAFSF-LKILELIP-HTVKPPHMLFVENVVG-FETSDTHAKMIEILANSDYLTQEFIL 157 (390)
Q Consensus 81 l~~g~PCq~fS~~g~~~~~~d~r~~l~-~~~~~~i~-~~~~~P~~~~~ENV~~-~~~~~~~~~~~~~l~~~GY~~~~~~l 157 (390)
|+..++.. + +. ...|+ .++++.+. .+ +|.=+++=|... +.....+..+.+.|.+..-.+.....
T Consensus 155 Ii~d~~~~-~---~~-------~~~l~~~~~l~~~~~~L--~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~ 221 (283)
T 2i7c_A 155 IIVDSSDP-I---GP-------AETLFNQNFYEKIYNAL--KPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANI 221 (283)
T ss_dssp EEEECCCT-T---TG-------GGGGSSHHHHHHHHHHE--EEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred EEEcCCCC-C---Cc-------chhhhHHHHHHHHHHhc--CCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEEEEE
Confidence 99865532 1 11 11222 33333333 34 565555545443 44555678888888877544544433
Q ss_pred CCCCcCCCccCcEEEEEEEeC
Q 016377 158 SPLQFGVPYSRPRYFCLAKRK 178 (390)
Q Consensus 158 ~a~~~G~pq~R~R~~~i~~~~ 178 (390)
.-..|.. -...|++++++
T Consensus 222 ~vP~y~~---g~~g~~~~s~~ 239 (283)
T 2i7c_A 222 SIPTYPC---GCIGILCCSKT 239 (283)
T ss_dssp ECTTSGG---GEEEEEEEESS
T ss_pred EcCCcCC---CcEEEEEEeCC
Confidence 3333321 23568888765
No 129
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=96.54 E-value=0.0083 Score=53.27 Aligned_cols=127 Identities=10% Similarity=-0.019 Sum_probs=76.9
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
..-+|||+.||.|.++..+...+-+ ..|.|+|+++.+++.-+.|.. + .++++|+.++-+..++...+|.++..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~-~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPE-QDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTT-SEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCC-CeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 4568999999999999998876532 258999999998888777642 2 34678888764433444469999988
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhC
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANS 148 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~ 148 (390)
+|+.-.......+..-. ..++.++.++++- .-.+++.-|... ..+.+.+.+...
T Consensus 113 ~~~p~~~~~~~~rr~~~--~~~l~~~~r~Lkp---GG~l~i~td~~~-----~~~~~~~~~~~~ 166 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQ--VPFAELVKSKLQL---GGVFHMATDWEP-----YAEHMLEVMSSI 166 (218)
T ss_dssp SCCCCCSGGGGGGSSCS--HHHHHHHHHHEEE---EEEEEEEESCHH-----HHHHHHHHHHTS
T ss_pred CCCCccchhhhhhhhhh--HHHHHHHHHHcCC---CcEEEEEeCCHH-----HHHHHHHHHHhC
Confidence 76553322111111111 1345555565543 234444444432 355566666543
No 130
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=96.52 E-value=0.0045 Score=56.03 Aligned_cols=71 Identities=18% Similarity=0.164 Sum_probs=55.1
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC----CCeecCccccchhhhcccCccEEEeCCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH----RPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~----~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
..-+|+|+.||.|.++..+.+.|. .|.++|+|+.+++..+.|+.. .++++|+.+++..+ ..++ .+++.+|
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~--~~~~-~vv~nlP 103 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRCN---FVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPK--NQSY-KIFGNIP 103 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSS---EEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCS--SCCC-EEEEECC
T ss_pred CCCEEEEEeCCchHHHHHHHHcCC---eEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCccc--CCCe-EEEEeCC
Confidence 446899999999999999998883 699999999999999998753 35788988875321 1123 5777887
Q ss_pred C
Q 016377 87 C 87 (390)
Q Consensus 87 C 87 (390)
=
T Consensus 104 y 104 (244)
T 1qam_A 104 Y 104 (244)
T ss_dssp G
T ss_pred c
Confidence 3
No 131
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=96.52 E-value=0.018 Score=51.66 Aligned_cols=126 Identities=10% Similarity=0.096 Sum_probs=80.9
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEE
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWL 82 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~ 82 (390)
...-+|||+.||.|.++..+...+.. .|.++|+++.+++..+.+... .++++|+.++. +....+|+++
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~fD~v~ 119 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKG--QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP---FQNEELDLIW 119 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCS--EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS---SCTTCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC---CCCCCEEEEE
Confidence 34569999999999999999998754 799999999999988877532 24678887764 2333599999
Q ss_pred eCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecc-ccc-cChH-------------HHHHHHHHHHh
Q 016377 83 LSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV-VGF-ETSD-------------THAKMIEILAN 147 (390)
Q Consensus 83 ~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV-~~~-~~~~-------------~~~~~~~~l~~ 147 (390)
.......+ + ...++.++.++++- .-.+++.+-. ..- .... ....+.+.|++
T Consensus 120 ~~~~l~~~----------~-~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 185 (257)
T 3f4k_A 120 SEGAIYNI----------G-FERGMNEWSKYLKK---GGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMER 185 (257)
T ss_dssp EESCSCCC----------C-HHHHHHHHHTTEEE---EEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHH
T ss_pred ecChHhhc----------C-HHHHHHHHHHHcCC---CcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 76442221 1 22345555554443 2344444422 000 0000 23567888899
Q ss_pred CCceeEE
Q 016377 148 SDYLTQE 154 (390)
Q Consensus 148 ~GY~~~~ 154 (390)
.||.+..
T Consensus 186 aGf~~v~ 192 (257)
T 3f4k_A 186 AGYTPTA 192 (257)
T ss_dssp TTEEEEE
T ss_pred CCCeEEE
Confidence 9998765
No 132
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=96.51 E-value=0.024 Score=47.63 Aligned_cols=119 Identities=9% Similarity=0.077 Sum_probs=75.1
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC------CCeecCccccchhhhcc--cCccEE
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH------RPYQGNIQNLTAAELDM--YGAHAW 81 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~------~~~~~di~~~~~~~~~~--~~~D~l 81 (390)
...-+|+|+.||.|.++..+....- ...+.++|+++.+++.-+.|... ..+.+|..+ .++. ..+|++
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~D~i 98 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPR----AFDDVPDNPDVI 98 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTG----GGGGCCSCCSEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHh----hhhccCCCCCEE
Confidence 3456899999999999999887621 12588999999999988887532 134556543 2222 359999
Q ss_pred EeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEEE
Q 016377 82 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEF 155 (390)
Q Consensus 82 ~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~ 155 (390)
+.+.+... ..++.++.++++. .-.+++.+. .......+...+++.|+.+...
T Consensus 99 ~~~~~~~~--------------~~~l~~~~~~L~~---gG~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 99 FIGGGLTA--------------PGVFAAAWKRLPV---GGRLVANAV-----TVESEQMLWALRKQFGGTISSF 150 (178)
T ss_dssp EECC-TTC--------------TTHHHHHHHTCCT---TCEEEEEEC-----SHHHHHHHHHHHHHHCCEEEEE
T ss_pred EECCcccH--------------HHHHHHHHHhcCC---CCEEEEEee-----ccccHHHHHHHHHHcCCeeEEE
Confidence 97655311 2345666665443 233443332 2234667778888888776543
No 133
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=96.51 E-value=0.012 Score=53.14 Aligned_cols=128 Identities=13% Similarity=0.103 Sum_probs=84.2
Q ss_pred CCCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCC----CCeecCccccchhhhcccCccEEEeC
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH----RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~----~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
....+|||+-||.|.++..+... |. .|.++|+++.+++..+.+... ..+++|+.++. ++...+|+++..
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~ 127 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYGA---HTHGIDICSNIVNMANERVSGNNKIIFEANDILTKE---FPENNFDLIYSR 127 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCC---CCTTCEEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCC---CCCCcEEEEeHH
Confidence 34569999999999999999886 64 589999999999999998854 34678888763 333359999976
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccc---cChH-------------HHHHHHHHHHhC
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSD-------------THAKMIEILANS 148 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~---~~~~-------------~~~~~~~~l~~~ 148 (390)
.....++ .++...++.++.++++- .-.+++.+-+..- .... ....+.+.|++.
T Consensus 128 ~~l~~~~--------~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 196 (266)
T 3ujc_A 128 DAILALS--------LENKNKLFQKCYKWLKP---TGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTAC 196 (266)
T ss_dssp SCGGGSC--------HHHHHHHHHHHHHHEEE---EEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHT
T ss_pred HHHHhcC--------hHHHHHHHHHHHHHcCC---CCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHc
Confidence 4433221 12334556666665553 2355665543322 1110 245677788888
Q ss_pred CceeEE
Q 016377 149 DYLTQE 154 (390)
Q Consensus 149 GY~~~~ 154 (390)
|+.+..
T Consensus 197 Gf~~~~ 202 (266)
T 3ujc_A 197 NFKNVV 202 (266)
T ss_dssp TCEEEE
T ss_pred CCeEEE
Confidence 886644
No 134
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=96.50 E-value=0.017 Score=51.53 Aligned_cols=102 Identities=15% Similarity=0.135 Sum_probs=69.0
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhc-----CC-CCeecCccccchhhhcccCccEEEe
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-----GH-RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~-----~~-~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
....+|||+.||.|.++..+...+. .+.++|+++.+++..+.+. +. .++.+|+.++. +....+|+++.
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~v~~ 93 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP---FPDDSFDIITC 93 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC---SCTTCEEEEEE
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC---CCCCcEEEEEE
Confidence 3456899999999999999988874 6899999999988877765 22 34678887764 33335999997
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccc
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~ 130 (390)
......+ .|. ..++.++.++++. .-.+++.+...
T Consensus 94 ~~~l~~~---------~~~-~~~l~~~~~~Lkp---gG~l~~~~~~~ 127 (239)
T 1xxl_A 94 RYAAHHF---------SDV-RKAVREVARVLKQ---DGRFLLVDHYA 127 (239)
T ss_dssp ESCGGGC---------SCH-HHHHHHHHHHEEE---EEEEEEEEECB
T ss_pred CCchhhc---------cCH-HHHHHHHHHHcCC---CcEEEEEEcCC
Confidence 6443322 222 3456666666554 34556656543
No 135
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=96.47 E-value=0.027 Score=47.12 Aligned_cols=137 Identities=11% Similarity=0.117 Sum_probs=85.8
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhhcccCccEEEeCCCCch
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSPPCQP 89 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~ 89 (390)
...+|||+-||.|.++.-+...+. .+.++|+++.+++..+.+.+. ..+.+| ..+....+|+++.......
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~v~~~~~d------~~~~~~~~D~v~~~~~l~~ 87 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFAT---KLYCIDINVIALKEVKEKFDSVITLSDP------KEIPDNSVDFILFANSFHD 87 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEE---EEEEECSCHHHHHHHHHHCTTSEEESSG------GGSCTTCEEEEEEESCSTT
T ss_pred CCCeEEEECCCCCHHHHHHHhhcC---eEEEEeCCHHHHHHHHHhCCCcEEEeCC------CCCCCCceEEEEEccchhc
Confidence 456899999999999999998883 699999999999999998654 234556 1233335999997644322
Q ss_pred hhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccCh-------HHHHHHHHHHHhCCceeEEEEeCCCCc
Q 016377 90 YTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS-------DTHAKMIEILANSDYLTQEFILSPLQF 162 (390)
Q Consensus 90 fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~-------~~~~~~~~~l~~~GY~~~~~~l~a~~~ 162 (390)
+ .+ ...++.++.++++. .-.+++.+-...-... -..+.+.+.|+ ||.+....- ..
T Consensus 88 ~---------~~-~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~-~~-- 149 (170)
T 3i9f_A 88 M---------DD-KQHVISEVKRILKD---DGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFN-PT-- 149 (170)
T ss_dssp C---------SC-HHHHHHHHHHHEEE---EEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEEC-SS--
T ss_pred c---------cC-HHHHHHHHHHhcCC---CCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccC-CC--
Confidence 2 22 33456666666654 2355555443322110 02445666666 887654432 21
Q ss_pred CCCccCcEEEEEEEeCC
Q 016377 163 GVPYSRPRYFCLAKRKP 179 (390)
Q Consensus 163 G~pq~R~R~~~i~~~~~ 179 (390)
...+.+++.+.+
T Consensus 150 -----~~~~~l~~~~~~ 161 (170)
T 3i9f_A 150 -----PYHFGLVLKRKT 161 (170)
T ss_dssp -----TTEEEEEEEECC
T ss_pred -----CceEEEEEecCC
Confidence 235667777765
No 136
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=96.46 E-value=0.0075 Score=51.38 Aligned_cols=70 Identities=17% Similarity=0.173 Sum_probs=53.9
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC--------CCeecCccccchhhhcccCccEEE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH--------RPYQGNIQNLTAAELDMYGAHAWL 82 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~--------~~~~~di~~~~~~~~~~~~~D~l~ 82 (390)
...+|+|+.||.|.++..+...+. .+.++|+++.+++..+.|... .++.+|+.+... ...+|+++
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~D~v~ 124 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEVK---STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK----DRKYNKII 124 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT----TSCEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc----cCCceEEE
Confidence 456899999999999999988853 699999999999988888631 235677766422 22599999
Q ss_pred eCCCC
Q 016377 83 LSPPC 87 (390)
Q Consensus 83 ~g~PC 87 (390)
..+|.
T Consensus 125 ~~~~~ 129 (194)
T 1dus_A 125 TNPPI 129 (194)
T ss_dssp ECCCS
T ss_pred ECCCc
Confidence 88764
No 137
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=96.45 E-value=0.0078 Score=58.65 Aligned_cols=104 Identities=8% Similarity=0.050 Sum_probs=69.9
Q ss_pred CCCceEEeeecCchhHHHHHH-hcCCCccEEEEEcccHHHHHHHHHhc----------C---C--CCeecCccccchhh-
Q 016377 10 GEAWRVLEFYSGIGGMRYSLM-KADVSAQVVEAFDINDKANDVYELNF----------G---H--RPYQGNIQNLTAAE- 72 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~-~aG~~~~~v~a~e~~~~a~~~~~~n~----------~---~--~~~~~di~~~~~~~- 72 (390)
...-+|+||-||.|.+.+.+. ..|.. -++|+|+++.+++.-+.|. + . .++++|+.++...+
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g~~--kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~ 249 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATNCK--HHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRER 249 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCCCS--EEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccc
Confidence 345689999999999998876 45754 7999999998877766542 1 2 35789999875432
Q ss_pred hcccCccEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecccc
Q 016377 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131 (390)
Q Consensus 73 ~~~~~~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~ 131 (390)
+. .+|+++..++| |. .+....+.++++.++- .-++++.|.+..
T Consensus 250 ~~--~aDVVf~Nn~~--F~---------pdl~~aL~Ei~RvLKP---GGrIVssE~f~p 292 (438)
T 3uwp_A 250 IA--NTSVIFVNNFA--FG---------PEVDHQLKERFANMKE---GGRIVSSKPFAP 292 (438)
T ss_dssp HH--TCSEEEECCTT--CC---------HHHHHHHHHHHTTSCT---TCEEEESSCSSC
T ss_pred cC--CccEEEEcccc--cC---------chHHHHHHHHHHcCCC---CcEEEEeecccC
Confidence 23 49999988776 21 1222234455553332 457888887753
No 138
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=96.44 E-value=0.0019 Score=59.08 Aligned_cols=70 Identities=11% Similarity=0.153 Sum_probs=51.2
Q ss_pred ceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-------------C--CCeecCccccchhhhcccC
Q 016377 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-------------H--RPYQGNIQNLTAAELDMYG 77 (390)
Q Consensus 13 ~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-------------~--~~~~~di~~~~~~~~~~~~ 77 (390)
-+|||+|||.|..++-+...|.+ |.++|+++..++..+.|.. . .++++|..++... +.+ .
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~---V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~-~~~-~ 164 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCR---VRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD-ITP-R 164 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCC---EEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTT-CSS-C
T ss_pred CEEEEcCCcCCHHHHHHHHcCCE---EEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHh-Ccc-c
Confidence 68999999999999999988854 9999999975444444421 1 3567787765332 222 4
Q ss_pred ccEEEeCCCC
Q 016377 78 AHAWLLSPPC 87 (390)
Q Consensus 78 ~D~l~~g~PC 87 (390)
+|+++.-||=
T Consensus 165 fDvV~lDP~y 174 (258)
T 2oyr_A 165 PQVVYLDPMF 174 (258)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEEcCCC
Confidence 9999999884
No 139
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=96.43 E-value=0.0048 Score=53.74 Aligned_cols=75 Identities=15% Similarity=0.150 Sum_probs=59.5
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC----CCeecCccccchhhhcccCccEEEeCC
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH----RPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~----~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
....+|||+.||.|.++..+...|.. .+.++|+++.+++.-+.+... .++.+|+.++. +....+|+++...
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~---~~~~~fD~v~~~~ 115 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLD---FPSASFDVVLEKG 115 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCC---SCSSCEEEEEEES
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCC---CCCCcccEEEECc
Confidence 34568999999999999999999975 699999999999999988753 34678888763 3333599999876
Q ss_pred CCch
Q 016377 86 PCQP 89 (390)
Q Consensus 86 PCq~ 89 (390)
+...
T Consensus 116 ~~~~ 119 (215)
T 2pxx_A 116 TLDA 119 (215)
T ss_dssp HHHH
T ss_pred chhh
Confidence 6433
No 140
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=96.43 E-value=0.0092 Score=60.53 Aligned_cols=80 Identities=14% Similarity=0.080 Sum_probs=55.6
Q ss_pred CCceEEeeecCchhHHHHHHhc----CCC-------------ccEEEEEcccHHHHHHHHHhc---C--------CCCee
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA----DVS-------------AQVVEAFDINDKANDVYELNF---G--------HRPYQ 62 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a----G~~-------------~~~v~a~e~~~~a~~~~~~n~---~--------~~~~~ 62 (390)
...+|+|.+||.|++.+.+.+. +-+ ...++++|+++.+.+.-+.|. . ..+.+
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 4579999999999998877642 100 125999999999999888773 1 13456
Q ss_pred cCccccchhhhcccCccEEEeCCCCchhhh
Q 016377 63 GNIQNLTAAELDMYGAHAWLLSPPCQPYTR 92 (390)
Q Consensus 63 ~di~~~~~~~~~~~~~D~l~~g~PCq~fS~ 92 (390)
+|......... ..+|++++.||.-....
T Consensus 249 gDtL~~~~~~~--~~fD~Vv~NPPf~~~~~ 276 (541)
T 2ar0_A 249 GNTLGSDGENL--PKAHIVATNPPFGSAAG 276 (541)
T ss_dssp SCTTSHHHHTS--CCEEEEEECCCCTTCSS
T ss_pred CCCcccccccc--cCCeEEEECCCcccccc
Confidence 66544332222 25999999999876543
No 141
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=96.42 E-value=0.0095 Score=51.13 Aligned_cols=99 Identities=16% Similarity=0.018 Sum_probs=66.9
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchhhhcccCccEEEeCC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
.-+|||+.||.|.++.-+...|. .+.++|+++.+++..+.+.. . ..+.+|+.++.. . ..+|+++...
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~---~-~~~D~v~~~~ 105 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANGY---DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF---D-RQYDFILSTV 105 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC---C-CCEEEEEEES
T ss_pred CCeEEEEcCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC---C-CCceEEEEcc
Confidence 45999999999999999998886 48999999999988887653 2 346778887643 2 2599999775
Q ss_pred CCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEec
Q 016377 86 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128 (390)
Q Consensus 86 PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~EN 128 (390)
....++ .+....++.++.++++. .-.+++++-
T Consensus 106 ~l~~~~--------~~~~~~~l~~~~~~L~~---gG~l~~~~~ 137 (199)
T 2xvm_A 106 VLMFLE--------AKTIPGLIANMQRCTKP---GGYNLIVAA 137 (199)
T ss_dssp CGGGSC--------GGGHHHHHHHHHHTEEE---EEEEEEEEE
T ss_pred hhhhCC--------HHHHHHHHHHHHHhcCC---CeEEEEEEe
Confidence 433221 12334455666665543 234455553
No 142
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=96.39 E-value=0.0028 Score=58.05 Aligned_cols=72 Identities=21% Similarity=0.142 Sum_probs=55.3
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccH-------HHHHHHHHhcC-----C--CCeecCccccchhhhcc--
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDIND-------KANDVYELNFG-----H--RPYQGNIQNLTAAELDM-- 75 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~-------~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~-- 75 (390)
.-+|||++||.|..++-+...|.+ |.++|+++ .+++..+.|.. + .++++|+.++... +.+
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~g~~---V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~-~~~~~ 159 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASLGLT---VTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPA-LVKTQ 159 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHTTCC---EEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHH-HHHHH
T ss_pred cCeEEEeeCccCHHHHHHHHhCCE---EEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHh-hhccC
Confidence 358999999999999999988854 89999999 99888877642 2 3577888875331 321
Q ss_pred cCccEEEeCCCC
Q 016377 76 YGAHAWLLSPPC 87 (390)
Q Consensus 76 ~~~D~l~~g~PC 87 (390)
..+|+++..||-
T Consensus 160 ~~fD~V~~dP~~ 171 (258)
T 2r6z_A 160 GKPDIVYLDPMY 171 (258)
T ss_dssp CCCSEEEECCCC
T ss_pred CCccEEEECCCC
Confidence 259999998874
No 143
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=96.39 E-value=0.025 Score=55.84 Aligned_cols=78 Identities=13% Similarity=0.100 Sum_probs=55.9
Q ss_pred CCceEEeeecCchhHHHHHHhcC----C--------CccEEEEEcccHHHHHHHHHhc---C-----CCCeecCccccch
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKAD----V--------SAQVVEAFDINDKANDVYELNF---G-----HRPYQGNIQNLTA 70 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG----~--------~~~~v~a~e~~~~a~~~~~~n~---~-----~~~~~~di~~~~~ 70 (390)
...+|+|.+||.|++.+.+.+.- . ....++++|+++.+.+.-+.|. + ..+.++|......
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~ 250 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEP 250 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCC
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcc
Confidence 45689999999999998876530 0 0125999999999998888774 1 2456777765533
Q ss_pred hhhcccCccEEEeCCCCchhhh
Q 016377 71 AELDMYGAHAWLLSPPCQPYTR 92 (390)
Q Consensus 71 ~~~~~~~~D~l~~g~PCq~fS~ 92 (390)
. . .+|++++.||......
T Consensus 251 ~---~-~fD~Iv~NPPf~~~~~ 268 (445)
T 2okc_A 251 S---T-LVDVILANPPFGTRPA 268 (445)
T ss_dssp S---S-CEEEEEECCCSSCCCT
T ss_pred c---C-CcCEEEECCCCCCccc
Confidence 2 1 4999999999766543
No 144
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=96.32 E-value=0.068 Score=47.27 Aligned_cols=66 Identities=14% Similarity=0.141 Sum_probs=51.3
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC----C-CCeecCccccchhhhcccCccEEEeCC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG----H-RPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~----~-~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
.-+|||+.||.|.++..+... . .+.++|+++.+++.-+.+.. . ..+.+|+.++.. .+ .+|+++...
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~--~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~---~~-~fD~v~~~~ 104 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH--Y--EVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELEL---PE-PVDAITILC 104 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT--S--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCC---SS-CEEEEEECT
T ss_pred CCeEEEecCCCCHHHHHHhhC--C--eEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCC---CC-CcCEEEEeC
Confidence 368999999999999988877 3 69999999999988887753 1 346788877642 22 599998754
No 145
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=96.29 E-value=0.0062 Score=53.26 Aligned_cols=69 Identities=20% Similarity=0.149 Sum_probs=54.7
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----------------C-CCeecCccccchhh
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----------------H-RPYQGNIQNLTAAE 72 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----------------~-~~~~~di~~~~~~~ 72 (390)
..-+|||+-||.|..+.-|.+.|+ .|.|+|+++.+++..+.+.. . ..+++|+.++...+
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~---~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCC---EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCC---eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 456899999999999999998896 49999999999998887743 1 34678999886543
Q ss_pred hcccCccEEEeC
Q 016377 73 LDMYGAHAWLLS 84 (390)
Q Consensus 73 ~~~~~~D~l~~g 84 (390)
.. .+|+++..
T Consensus 99 ~~--~fD~v~~~ 108 (203)
T 1pjz_A 99 IG--HCAAFYDR 108 (203)
T ss_dssp HH--SEEEEEEE
T ss_pred CC--CEEEEEEC
Confidence 23 49999854
No 146
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=96.27 E-value=0.012 Score=53.23 Aligned_cols=100 Identities=13% Similarity=0.045 Sum_probs=66.7
Q ss_pred CCceEEeeecCchhHHHHHHhc---CCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA---DVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHA 80 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a---G~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~ 80 (390)
..-+|||+.||.|+.+..+..+ +. .|.++|+++..++.-+.|+. + .++.+|+.+..+..-....+|+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADG---QLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDL 139 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTC---EEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEE
Confidence 3568999999999999999886 32 69999999999988888863 1 3467787764332111125999
Q ss_pred EEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccc
Q 016377 81 WLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130 (390)
Q Consensus 81 l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~ 130 (390)
++...++..+ ...+.++.++++- --++++.||.
T Consensus 140 V~~d~~~~~~-------------~~~l~~~~~~Lkp----GG~lv~~~~~ 172 (248)
T 3tfw_A 140 IFIDADKPNN-------------PHYLRWALRYSRP----GTLIIGDNVV 172 (248)
T ss_dssp EEECSCGGGH-------------HHHHHHHHHTCCT----TCEEEEECCS
T ss_pred EEECCchHHH-------------HHHHHHHHHhcCC----CeEEEEeCCC
Confidence 9986653322 1234444443332 2588889884
No 147
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=96.21 E-value=0.0075 Score=53.07 Aligned_cols=69 Identities=16% Similarity=0.202 Sum_probs=55.0
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhc----CC-CCeecCccccchhhhcccCccEEEeCCC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF----GH-RPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~----~~-~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
..+|||+.||.|.++.-+...|. .+.++|+++.+++..+.+. +. .++++|+.++. ++...+|+++...+
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~~~~D~v~~~~~ 112 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS---FEDKTFDYVIFIDS 112 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC---SCTTCEEEEEEESC
T ss_pred CCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCC---CCCCcEEEEEEcCc
Confidence 56999999999999999999885 5899999999988888775 22 45678888764 33335999998766
No 148
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=96.21 E-value=0.059 Score=51.51 Aligned_cols=152 Identities=13% Similarity=0.026 Sum_probs=89.2
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC--------------CCeecCccccchhhh-cc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH--------------RPYQGNIQNLTAAEL-DM 75 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~--------------~~~~~di~~~~~~~~-~~ 75 (390)
..-+||++++|.|++..-+...+. +.|.++|+|+.+++.-+.|++. .++.+|..++-.... ..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~--~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP--KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC--SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 567999999999999988877774 3899999999999999999873 234567766543211 12
Q ss_pred cCccEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhc-----ccccCCCcEEEEeccccccChHHHHHHHHHHHhCCc
Q 016377 76 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELI-----PHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDY 150 (390)
Q Consensus 76 ~~~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i-----~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY 150 (390)
..+|+|+.-+|=.+++ .. +..-...++++.+ +.+ +|.=+++=+.....-......+-+.|.++--
T Consensus 266 ~~fDvII~D~~d~P~~---~~-----p~~L~t~eFy~~~~~~~~~~L--~pgGilv~qs~s~~~~e~~~~~~~~l~~~F~ 335 (364)
T 2qfm_A 266 REFDYVINDLTAVPIS---TS-----PEEDSTWEFLRLILDLSMKVL--KQDGKYFTQGNCVNLTEALSLYEEQLGRLYC 335 (364)
T ss_dssp CCEEEEEEECCSSCCC---CC---------CHHHHHHHHHHHHHHTE--EEEEEEEEEEEETTCHHHHHHHHHHHTTSSS
T ss_pred CCceEEEECCCCcccC---cC-----chhhhHHHHHHHHHHHHHhhC--CCCcEEEEEcCCcchHHHHHHHHHHHHHhCC
Confidence 3599999987631111 10 1001113333332 445 6665554443322113333333334665544
Q ss_pred eeEE--EEeCCCCcCCCccCcEEEEEEEeC
Q 016377 151 LTQE--FILSPLQFGVPYSRPRYFCLAKRK 178 (390)
Q Consensus 151 ~~~~--~~l~a~~~G~pq~R~R~~~i~~~~ 178 (390)
.+.. ....-..|+- ...|.+++++
T Consensus 336 ~v~~~~~~~~vPsy~~----~w~f~~~~k~ 361 (364)
T 2qfm_A 336 PVEFSKEIVCVPSYLE----LWVFYTVWKK 361 (364)
T ss_dssp CEEEEEEEECCGGGSS----CEEEEEEEEC
T ss_pred ceEEeeEeeecCCchh----heEeEEeecc
Confidence 5554 3444445532 5777777765
No 149
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.18 E-value=0.006 Score=58.50 Aligned_cols=79 Identities=15% Similarity=0.129 Sum_probs=57.7
Q ss_pred CCCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC------------CCeecCccccchhhhccc
Q 016377 9 DGEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH------------RPYQGNIQNLTAAELDMY 76 (390)
Q Consensus 9 ~~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~------------~~~~~di~~~~~~~~~~~ 76 (390)
-...-+|||+|||.||=++.+.+.+-. ..|+|+|+++..++..+.|... .+...|...+.. ....
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~-~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~--~~~~ 222 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCC-RNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGE--LEGD 222 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCE-EEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHH--HSTT
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCC-CcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcch--hccc
Confidence 455678999999999999998887642 3588999999999998888631 123345444432 2222
Q ss_pred CccEEEeCCCCchh
Q 016377 77 GAHAWLLSPPCQPY 90 (390)
Q Consensus 77 ~~D~l~~g~PCq~f 90 (390)
.+|.|..-+||.+-
T Consensus 223 ~fD~VLlDaPCSg~ 236 (359)
T 4fzv_A 223 TYDRVLVDVPCTTD 236 (359)
T ss_dssp CEEEEEEECCCCCH
T ss_pred cCCEEEECCccCCC
Confidence 59999999999873
No 150
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=96.15 E-value=0.028 Score=52.43 Aligned_cols=126 Identities=12% Similarity=0.070 Sum_probs=81.7
Q ss_pred CCCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEE
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAW 81 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l 81 (390)
...-+|||+.||.|.++.-+.+. |. .|.++|+++.+++..+.|... ..+.+|+.++. +....+|++
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~V 189 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGS---RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP---FDKGAVTAS 189 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---CCTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC---CCCCCEeEE
Confidence 34568999999999999999887 74 489999999999888877531 34678888764 333359999
Q ss_pred EeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccC---hH--------------HHHHHHHH
Q 016377 82 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET---SD--------------THAKMIEI 144 (390)
Q Consensus 82 ~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~---~~--------------~~~~~~~~ 144 (390)
+......- . + ...++.++.++++- .-.+++.+....-.. .. ....+.+.
T Consensus 190 ~~~~~l~~---------~-~-~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 255 (312)
T 3vc1_A 190 WNNESTMY---------V-D-LHDLFSEHSRFLKV---GGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRA 255 (312)
T ss_dssp EEESCGGG---------S-C-HHHHHHHHHHHEEE---EEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHH
T ss_pred EECCchhh---------C-C-HHHHHHHHHHHcCC---CcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHH
Confidence 96432111 1 1 34456666666554 345666653322211 00 13567788
Q ss_pred HHhCCceeEEE
Q 016377 145 LANSDYLTQEF 155 (390)
Q Consensus 145 l~~~GY~~~~~ 155 (390)
|++.|+.+...
T Consensus 256 l~~aGf~~~~~ 266 (312)
T 3vc1_A 256 MADNRLVPHTI 266 (312)
T ss_dssp HHTTTEEEEEE
T ss_pred HHHCCCEEEEE
Confidence 88888875443
No 151
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=96.12 E-value=0.024 Score=50.58 Aligned_cols=107 Identities=12% Similarity=0.040 Sum_probs=73.9
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC---CCeecCccccchhh-hcc-cCccEEEeC
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH---RPYQGNIQNLTAAE-LDM-YGAHAWLLS 84 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~---~~~~~di~~~~~~~-~~~-~~~D~l~~g 84 (390)
....+|||+-||.|..+.-+...|.+ |.++|+++.+++..+.+.+. ..+++|+.++.... +.. ..+|+++..
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFPR---VIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSSC---EEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCCC---EEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEc
Confidence 44578999999999999999998864 88999999999999999864 34678888865432 211 137888876
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccc
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~ 130 (390)
....-++ .++...++.++.++++- .-.++++|...
T Consensus 132 ~~~~~~~--------~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~ 166 (245)
T 3ggd_A 132 TGFHHIP--------VEKRELLGQSLRILLGK---QGAMYLIELGT 166 (245)
T ss_dssp SSSTTSC--------GGGHHHHHHHHHHHHTT---TCEEEEEEECT
T ss_pred chhhcCC--------HHHHHHHHHHHHHHcCC---CCEEEEEeCCc
Confidence 5433221 12334556666665543 34677777654
No 152
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=96.09 E-value=0.025 Score=51.78 Aligned_cols=70 Identities=14% Similarity=0.047 Sum_probs=55.6
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEEeC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
..+|||+-||.|.++..+...|. .+.++|+++.+++..+.+... .++++|+.++.. +....+|+++..
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~~fD~v~~~ 143 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGH---QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVAS--HLETPVDLILFH 143 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGG--GCSSCEEEEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhh--hcCCCceEEEEC
Confidence 57999999999999999999986 489999999999998888632 256788887752 233369999976
Q ss_pred CC
Q 016377 85 PP 86 (390)
Q Consensus 85 ~P 86 (390)
..
T Consensus 144 ~~ 145 (285)
T 4htf_A 144 AV 145 (285)
T ss_dssp SC
T ss_pred ch
Confidence 44
No 153
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=96.08 E-value=0.098 Score=48.58 Aligned_cols=151 Identities=11% Similarity=0.007 Sum_probs=88.2
Q ss_pred CCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcC--------C---CCeecCccccchhhhcccCc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFG--------H---RPYQGNIQNLTAAELDMYGA 78 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~--------~---~~~~~di~~~~~~~~~~~~~ 78 (390)
..-+|||+.||.|++...+.+. +.. .|.++|+|+..++.-+.|++ + .++.+|..+.... ....+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~--~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~~~f 158 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVE--SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ--TSQTF 158 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCC--EEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C--CCCCE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh--cCCCc
Confidence 3569999999999999888875 433 79999999999999888764 1 3467888776432 12259
Q ss_pred cEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecccc-ccChHHHHHHHHHHHhCCceeEEEEe
Q 016377 79 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG-FETSDTHAKMIEILANSDYLTQEFIL 157 (390)
Q Consensus 79 D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~-~~~~~~~~~~~~~l~~~GY~~~~~~l 157 (390)
|+|+..+|.. + +....+. ....+..+.+ .+ +|.=+++=|... +.....+..+.+.+.+..-.+.....
T Consensus 159 DvIi~D~~~p-~---~~~~~l~--~~~f~~~~~~---~L--kpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~ 227 (294)
T 3adn_A 159 DVIISDCTDP-I---GPGESLF--TSAFYEGCKR---CL--NPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQA 227 (294)
T ss_dssp EEEEECC--------------C--CHHHHHHHHH---TE--EEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEE
T ss_pred cEEEECCCCc-c---Ccchhcc--HHHHHHHHHH---hc--CCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEE
Confidence 9999976632 1 1111110 0122333333 34 565555545432 34445677788888776444444333
Q ss_pred CCCCcCCCccCcEEEEEEEeCC
Q 016377 158 SPLQFGVPYSRPRYFCLAKRKP 179 (390)
Q Consensus 158 ~a~~~G~pq~R~R~~~i~~~~~ 179 (390)
.-..| | .-...|++|++..
T Consensus 228 ~vp~~--p-~g~~~f~~as~~~ 246 (294)
T 3adn_A 228 AIPTY--Y-GGIMTFAWATDND 246 (294)
T ss_dssp ECTTS--S-SSEEEEEEEESCT
T ss_pred Eeccc--C-CCceEEEEEeCCc
Confidence 32233 0 1456788888764
No 154
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=96.07 E-value=0.033 Score=50.22 Aligned_cols=100 Identities=16% Similarity=0.165 Sum_probs=67.7
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhc-----CC-CCeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-----GH-RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~-----~~-~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
...+|||+-||.|.++..+...+. .+.++|+++..++.-+.+. +. ..+.+|+.++. +++..+|+++..
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~---~~~~~fD~V~~~ 110 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP---FTDERFHIVTCR 110 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC---SCTTCEEEEEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC---CCCCCEEEEEEh
Confidence 456899999999999999988874 6999999999988877764 22 34678888764 333359999976
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecc
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV 129 (390)
...+-+ .|. ..++.++.++++- .-.+++.+..
T Consensus 111 ~~l~~~---------~d~-~~~l~~~~r~Lkp---gG~l~~~~~~ 142 (260)
T 1vl5_A 111 IAAHHF---------PNP-ASFVSEAYRVLKK---GGQLLLVDNS 142 (260)
T ss_dssp SCGGGC---------SCH-HHHHHHHHHHEEE---EEEEEEEEEE
T ss_pred hhhHhc---------CCH-HHHHHHHHHHcCC---CCEEEEEEcC
Confidence 543332 232 3456666666553 2345555543
No 155
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=96.06 E-value=0.018 Score=50.73 Aligned_cols=100 Identities=17% Similarity=0.059 Sum_probs=67.0
Q ss_pred CCceEEeeecCchhHHHHHHhc---CCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcc--cCc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA---DVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDM--YGA 78 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a---G~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~--~~~ 78 (390)
..-+|||+.||.|+.+..+..+ |. .+.++|+++..++.-+.|+. + .++.+|+.+..+..... ..+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~f 134 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGG---RVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPF 134 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCc
Confidence 3468999999999999999887 43 59999999999988888763 1 24677876653321110 249
Q ss_pred cEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccc
Q 016377 79 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130 (390)
Q Consensus 79 D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~ 130 (390)
|+++...+|..+ ..++.++.++++. --++++.|+.
T Consensus 135 D~v~~d~~~~~~-------------~~~l~~~~~~L~p----gG~lv~~~~~ 169 (223)
T 3duw_A 135 DFIFIDADKQNN-------------PAYFEWALKLSRP----GTVIIGDNVV 169 (223)
T ss_dssp SEEEECSCGGGH-------------HHHHHHHHHTCCT----TCEEEEESCS
T ss_pred CEEEEcCCcHHH-------------HHHHHHHHHhcCC----CcEEEEeCCC
Confidence 999987764322 1234444443332 2488888884
No 156
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=96.05 E-value=0.008 Score=54.46 Aligned_cols=68 Identities=13% Similarity=0.065 Sum_probs=56.4
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhhcccCccEEEeCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
...+|||+.||.|.++..+...|. .+.++|+++.+++..+.+.+. .++++|+.++.. . ..+|+++...
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~---~-~~fD~v~~~~ 118 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG---TVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL---G-RRFSAVTCMF 118 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS---EEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC---S-CCEEEEEECT
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc---c-CCcCEEEEcC
Confidence 347899999999999999999885 489999999999999999875 456789988754 2 2599999764
No 157
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=96.04 E-value=0.046 Score=48.94 Aligned_cols=147 Identities=12% Similarity=0.118 Sum_probs=83.9
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCe--ecCccccchhhhcccCccEEEeCCCCc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPY--QGNIQNLTAAELDMYGAHAWLLSPPCQ 88 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~--~~di~~~~~~~~~~~~~D~l~~g~PCq 88 (390)
...+|||+-||.|+++.-+.+.|.. .|+|+|+++..++.-..+.+.... ..++..+...++....+|........
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~--~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~- 113 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAK--LVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSF- 113 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCS--EEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSS-
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCC--EEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEh-
Confidence 3468999999999999999999865 799999999887775666554221 12444444344432113333322221
Q ss_pred hhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEE-----ecc------ccccChH-----HHHHHHHHHHhCCcee
Q 016377 89 PYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV-----ENV------VGFETSD-----THAKMIEILANSDYLT 152 (390)
Q Consensus 89 ~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~-----ENV------~~~~~~~-----~~~~~~~~l~~~GY~~ 152 (390)
+.. ..++.++.++++- .-.++++ |-. .|+.... ..+.+.+.+++.||.+
T Consensus 114 --~~l----------~~~l~~i~rvLkp---gG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v 178 (232)
T 3opn_A 114 --ISL----------DLILPPLYEILEK---NGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSV 178 (232)
T ss_dssp --SCG----------GGTHHHHHHHSCT---TCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEE
T ss_pred --hhH----------HHHHHHHHHhccC---CCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEE
Confidence 110 3457777776654 3355554 111 1221111 3567888899999998
Q ss_pred EEEEeCCCCcCCCccCcEEEEEEEe
Q 016377 153 QEFILSPLQFGVPYSRPRYFCLAKR 177 (390)
Q Consensus 153 ~~~~l~a~~~G~pq~R~R~~~i~~~ 177 (390)
......... .+.-...+++.+.+
T Consensus 179 ~~~~~~pi~--g~~gn~e~l~~~~~ 201 (232)
T 3opn_A 179 KGLTFSPIK--GGAGNVEFLVHLLK 201 (232)
T ss_dssp EEEEECSSC--BTTTBCCEEEEEEE
T ss_pred EEEEEccCC--CCCCCHHHHHHHhh
Confidence 765544332 22223334444444
No 158
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=96.03 E-value=0.012 Score=53.23 Aligned_cols=90 Identities=17% Similarity=0.147 Sum_probs=66.3
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCCCchh
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPPCQPY 90 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~f 90 (390)
...+|||+-||.|.++.-+...|. .+.++|+++.+++..+.+.....+.+|+.++. ++...+|+++.......+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~~~~~ 127 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF---EVVLVDPSKEMLEVAREKGVKNVVEAKAEDLP---FPSGAFEAVLALGDVLSY 127 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHHTCSCEEECCTTSCC---SCTTCEEEEEECSSHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC---eEEEEeCCHHHHHHHHhhcCCCEEECcHHHCC---CCCCCEEEEEEcchhhhc
Confidence 456899999999999999999885 48999999999999998877557788888764 333359999976544333
Q ss_pred hhccCCCCCCChhhhhHHHHHHhcc
Q 016377 91 TRQGLQKQSSDARAFSFLKILELIP 115 (390)
Q Consensus 91 S~~g~~~~~~d~r~~l~~~~~~~i~ 115 (390)
. .+ ...++.++.++++
T Consensus 128 ~--------~~-~~~~l~~~~~~Lk 143 (260)
T 2avn_A 128 V--------EN-KDKAFSEIRRVLV 143 (260)
T ss_dssp C--------SC-HHHHHHHHHHHEE
T ss_pred c--------cc-HHHHHHHHHHHcC
Confidence 2 12 3445666666554
No 159
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=95.98 E-value=0.011 Score=53.78 Aligned_cols=69 Identities=13% Similarity=0.015 Sum_probs=54.6
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC---------------------C--CCeecCccc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG---------------------H--RPYQGNIQN 67 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~---------------------~--~~~~~di~~ 67 (390)
...+|||+-||.|..+.-|.+.|++ |.|+|+++.+++..+.+.. . ..+++|+.+
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~~---V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGHT---VVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTCE---EEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCCe---EEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 4579999999999999999999974 9999999999998876653 1 346789988
Q ss_pred cchhhhcccCccEEEeC
Q 016377 68 LTAAELDMYGAHAWLLS 84 (390)
Q Consensus 68 ~~~~~~~~~~~D~l~~g 84 (390)
+...+.. .+|+++..
T Consensus 145 l~~~~~~--~FD~V~~~ 159 (252)
T 2gb4_A 145 LPRANIG--KFDRIWDR 159 (252)
T ss_dssp GGGGCCC--CEEEEEES
T ss_pred CCcccCC--CEEEEEEh
Confidence 8654222 49999853
No 160
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=95.95 E-value=0.009 Score=55.28 Aligned_cols=76 Identities=12% Similarity=0.155 Sum_probs=57.5
Q ss_pred CCceEEeeecCchhHHHHHHhcCCC-ccEEEEEcccHHHHHHHHHhc-CC-CCeecCccccchhhhccc---CccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVS-AQVVEAFDINDKANDVYELNF-GH-RPYQGNIQNLTAAELDMY---GAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~-~~~v~a~e~~~~a~~~~~~n~-~~-~~~~~di~~~~~~~~~~~---~~D~l~~g 84 (390)
..-+|||+-||.|.++..+...+.+ -..|.|+|+|+..++..+.++ +. .++++|+.+++..++... ..+.+++.
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~~~~vv~N 121 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFGSIARPGDEPSLRIIGN 121 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGGGGSCSSSSCCEEEEEE
T ss_pred CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChhHhcccccCCceEEEEc
Confidence 3568999999999999999987642 012999999999999998884 22 467899999876655320 24567877
Q ss_pred CC
Q 016377 85 PP 86 (390)
Q Consensus 85 ~P 86 (390)
+|
T Consensus 122 lP 123 (279)
T 3uzu_A 122 LP 123 (279)
T ss_dssp CC
T ss_pred cC
Confidence 77
No 161
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=95.94 E-value=0.013 Score=52.08 Aligned_cols=76 Identities=11% Similarity=0.039 Sum_probs=54.3
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccEEEeC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
.-+|||+.||.|..+.-+....- ...|.++|+++.+++..+.|+. . .++.+|+.+..+.......+|+++..
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 45899999999999999888631 1269999999999998888863 1 24567777653321112259999987
Q ss_pred CCCc
Q 016377 85 PPCQ 88 (390)
Q Consensus 85 ~PCq 88 (390)
.+|.
T Consensus 134 ~~~~ 137 (233)
T 2gpy_A 134 AAKG 137 (233)
T ss_dssp GGGS
T ss_pred CCHH
Confidence 7753
No 162
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=95.93 E-value=0.0082 Score=62.86 Aligned_cols=100 Identities=14% Similarity=0.018 Sum_probs=66.3
Q ss_pred CCceEEeeecCchhHHHHHHhcC------C-------C-c---------------------------cEEEEEcccHHHH
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKAD------V-------S-A---------------------------QVVEAFDINDKAN 49 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG------~-------~-~---------------------------~~v~a~e~~~~a~ 49 (390)
..-.++|.|||.|++.+.+...+ + + | ..++++|+|+.++
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 34679999999999887665432 1 0 0 2599999999999
Q ss_pred HHHHHhcCC-------CCeecCccccchhhhcccCccEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccc
Q 016377 50 DVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHT 117 (390)
Q Consensus 50 ~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~ 117 (390)
+.-+.|... .+.++|+.++....-. ..+|+++..||= |.+-+....-..++..+.++++..
T Consensus 270 ~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~-~~~d~Iv~NPPY------G~Rlg~~~~l~~ly~~l~~~lk~~ 337 (703)
T 3v97_A 270 QRARTNARLAGIGELITFEVKDVAQLTNPLPK-GPYGTVLSNPPY------GERLDSEPALIALHSLLGRIMKNQ 337 (703)
T ss_dssp HHHHHHHHHTTCGGGEEEEECCGGGCCCSCTT-CCCCEEEECCCC------CC---CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCceEEEECChhhCcccccc-CCCCEEEeCCCc------cccccchhHHHHHHHHHHHHHHhh
Confidence 999998531 3467888887532111 149999999993 444333334456676666666653
No 163
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=95.92 E-value=0.11 Score=52.42 Aligned_cols=77 Identities=12% Similarity=0.172 Sum_probs=55.1
Q ss_pred CCCceEEeeecCchhHHHHHHhc----CCCccEEEEEcccHHHHHHHHHhc---CC-----CCeecCccccchhhhcccC
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNF---GH-----RPYQGNIQNLTAAELDMYG 77 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~a----G~~~~~v~a~e~~~~a~~~~~~n~---~~-----~~~~~di~~~~~~~~~~~~ 77 (390)
....+|+|.+||.|++-+.+.+. +- ..++++|+++.+...-+.|. +. .+.++|.-..+........
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~--~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~ 297 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQT--VVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTN 297 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTT--CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCC
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccC--ceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccccccccc
Confidence 46779999999999998877653 22 37999999999999888873 21 2456776554211112235
Q ss_pred ccEEEeCCCCc
Q 016377 78 AHAWLLSPPCQ 88 (390)
Q Consensus 78 ~D~l~~g~PCq 88 (390)
+|++++.||-.
T Consensus 298 fD~IvaNPPf~ 308 (542)
T 3lkd_A 298 FDGVLMNPPYS 308 (542)
T ss_dssp BSEEEECCCTT
T ss_pred ccEEEecCCcC
Confidence 99999999954
No 164
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=95.91 E-value=0.0081 Score=52.59 Aligned_cols=70 Identities=11% Similarity=-0.021 Sum_probs=56.8
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC----CCeecCccccchhhhcccCccEEEeCC
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH----RPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~----~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
....+|||+-||.|.++..+...|. .+.++|+++.+++..+.+... ..+++|+.++.+ ...+|+++...
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~----~~~fD~v~~~~ 122 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHCK---RLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFST----AELFDLIVVAE 122 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGEE---EEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCC----SCCEEEEEEES
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCC----CCCccEEEEcc
Confidence 3457899999999999999998874 589999999999999999865 346788888762 23599999763
Q ss_pred C
Q 016377 86 P 86 (390)
Q Consensus 86 P 86 (390)
.
T Consensus 123 ~ 123 (216)
T 3ofk_A 123 V 123 (216)
T ss_dssp C
T ss_pred H
Confidence 3
No 165
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=95.91 E-value=0.052 Score=50.68 Aligned_cols=151 Identities=12% Similarity=0.045 Sum_probs=84.6
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC----------CCeecCccccchhhhcccCccE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH----------RPYQGNIQNLTAAELDMYGAHA 80 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~----------~~~~~di~~~~~~~~~~~~~D~ 80 (390)
..-+|||+.||.|+++.-+.+.+- ...+.++|+|+..++..+.|++. .++.+|..+.... ....+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~--~~~~fD~ 171 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPS-VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ--NQDAFDV 171 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT--CSSCEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhh--CCCCceE
Confidence 346899999999999999887631 23799999999999998888642 2456777664222 1225999
Q ss_pred EEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCc-EEEEeccccccChHHHHHHHHHHHhCCceeEEEEeCC
Q 016377 81 WLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPH-MLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSP 159 (390)
Q Consensus 81 l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~-~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l~a 159 (390)
|+..+|... +... ......++..+.++ + +|. ++++++..-+......+.+.+.+.+.-=.+......-
T Consensus 172 Ii~d~~~~~----~~~~--~l~~~~~l~~~~~~---L--kpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~v 240 (304)
T 2o07_A 172 IITDSSDPM----GPAE--SLFKESYYQLMKTA---L--KEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTI 240 (304)
T ss_dssp EEEECC-----------------CHHHHHHHHH---E--EEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEEEEEC
T ss_pred EEECCCCCC----Ccch--hhhHHHHHHHHHhc---c--CCCeEEEEecCCcccchHHHHHHHHHHHHhCCCceeEEEEe
Confidence 998766321 1100 00112234444443 3 454 5555654434444455666666665432333332222
Q ss_pred CCcCCCccCcEEEEEEEeC
Q 016377 160 LQFGVPYSRPRYFCLAKRK 178 (390)
Q Consensus 160 ~~~G~pq~R~R~~~i~~~~ 178 (390)
..|. .-.--|++++++
T Consensus 241 P~~~---~g~~g~~~as~~ 256 (304)
T 2o07_A 241 PTYP---SGQIGFMLCSKN 256 (304)
T ss_dssp TTSG---GGEEEEEEEESS
T ss_pred cccc---CcceEEEEEeCC
Confidence 2231 124567777754
No 166
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=95.91 E-value=0.05 Score=51.07 Aligned_cols=147 Identities=13% Similarity=0.056 Sum_probs=82.6
Q ss_pred CceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCC----------CCeecCccccchhhhcccCccE
Q 016377 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH----------RPYQGNIQNLTAAELDMYGAHA 80 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~----------~~~~~di~~~~~~~~~~~~~D~ 80 (390)
.-+|||+-||.|++..-+... +.. .|.++|+|+.+++.-+.|++. .++.+|+.+.... ....+|+
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~--~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~~~fD~ 184 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVE--KVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN--HKNEFDV 184 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCC--EEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH--CTTCEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCC--EEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHh--cCCCceE
Confidence 468999999999999988765 333 799999999999999999863 2356676654222 2225999
Q ss_pred EEeCCCCchhhhccCCCCCCChhhhhH-HHHHHhcc-cccCCCc-EEEEeccccccChHHHHHHHHHHHhCCceeEEEEe
Q 016377 81 WLLSPPCQPYTRQGLQKQSSDARAFSF-LKILELIP-HTVKPPH-MLFVENVVGFETSDTHAKMIEILANSDYLTQEFIL 157 (390)
Q Consensus 81 l~~g~PCq~fS~~g~~~~~~d~r~~l~-~~~~~~i~-~~~~~P~-~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l 157 (390)
|+..++.. + +.. ..|+ .++++.+. .+ +|. ++++++-.-+.....+..+.+.+++..=.+.....
T Consensus 185 Ii~d~~~~-~---~~~-------~~l~t~~~l~~~~~~L--kpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~ 251 (314)
T 2b2c_A 185 IITDSSDP-V---GPA-------ESLFGQSYYELLRDAL--KEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTYAQS 251 (314)
T ss_dssp EEECCC------------------------HHHHHHHHE--EEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred EEEcCCCC-C---Ccc-------hhhhHHHHHHHHHhhc--CCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcceEEEE
Confidence 99876532 1 111 1122 33333332 33 454 55555422233444566777777765333333222
Q ss_pred CCCCcCCCccCcEEEEEEEeC
Q 016377 158 SPLQFGVPYSRPRYFCLAKRK 178 (390)
Q Consensus 158 ~a~~~G~pq~R~R~~~i~~~~ 178 (390)
.-.-|.. -..-|++++++
T Consensus 252 ~iP~~~~---g~~g~~~ask~ 269 (314)
T 2b2c_A 252 IVSTYPS---GSMGYLICAKN 269 (314)
T ss_dssp ECTTSGG---GEEEEEEEESS
T ss_pred EecCcCC---CceEEEEEeCC
Confidence 1112210 12357777765
No 167
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=95.90 E-value=0.012 Score=56.87 Aligned_cols=65 Identities=20% Similarity=0.180 Sum_probs=50.3
Q ss_pred ceEEeeecCchhHHHHHHhcCCCccEEEEEcccH---HHHHHHHHhcC-C--CCeecCccccchhhhcccCccEEEe
Q 016377 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDIND---KANDVYELNFG-H--RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 13 ~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~---~a~~~~~~n~~-~--~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
-+|||+-||.|.+|+-+.++|.+ .|+|+|.++ .|.+..+.|.- + .++.+|++++. +++ .+|+|+.
T Consensus 85 k~VLDvG~GtGiLs~~Aa~aGA~--~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~---lpe-~~Dvivs 155 (376)
T 4hc4_A 85 KTVLDVGAGTGILSIFCAQAGAR--RVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVE---LPE-QVDAIVS 155 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCS--EEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCC---CSS-CEEEEEC
T ss_pred CEEEEeCCCccHHHHHHHHhCCC--EEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeec---CCc-cccEEEe
Confidence 37999999999999999999966 999999884 45555555543 3 35789999884 444 5999984
No 168
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=95.90 E-value=0.0092 Score=54.36 Aligned_cols=73 Identities=11% Similarity=0.093 Sum_probs=55.4
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC----CCeecCccccchhhhc--ccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH----RPYQGNIQNLTAAELD--MYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~----~~~~~di~~~~~~~~~--~~~~D~l~~g 84 (390)
..-+|+|+-||.|.++. +...+ + ..|.|+|+|+..++..+.++.. .++++|+.+++..++. ....|++++.
T Consensus 21 ~~~~VLEIG~G~G~lt~-l~~~~-~-~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~~~vvsN 97 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-PVGER-L-DQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGN 97 (252)
T ss_dssp TTCCEEEECCTTTTTHH-HHHTT-C-SCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHHHTSCEEEEEE
T ss_pred CcCEEEEECCCCcHHHH-hhhCC-C-CeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhcccCCceEEEEC
Confidence 34589999999999999 87532 1 0299999999999999988753 4678999998654432 1136789999
Q ss_pred CC
Q 016377 85 PP 86 (390)
Q Consensus 85 ~P 86 (390)
+|
T Consensus 98 lP 99 (252)
T 1qyr_A 98 LP 99 (252)
T ss_dssp CC
T ss_pred CC
Confidence 88
No 169
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=95.89 E-value=0.096 Score=46.85 Aligned_cols=120 Identities=12% Similarity=0.012 Sum_probs=77.9
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEEeC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
.-+|+|+.||.|-+++.+...|. ...|+|+|+++.|.+.-+.|... .+..+|..+.... ...+|+++.
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~-~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~---~~~~D~Ivi- 96 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMGY-CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE---ADNIDTITI- 96 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTC-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---GGCCCEEEE-
T ss_pred CCEEEEECCchHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc---ccccCEEEE-
Confidence 46899999999999999999874 23699999999999999998631 2356776664321 114898762
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEEEEe
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFIL 157 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l 157 (390)
+|.. +.+..+++.-.......-.++++-=.. ....+.+.|.+.||.+....+
T Consensus 97 --------aGmG-------g~lI~~IL~~~~~~l~~~~~lIlqp~~------~~~~lr~~L~~~Gf~i~~E~l 148 (230)
T 3lec_A 97 --------CGMG-------GRLIADILNNDIDKLQHVKTLVLQPNN------REDDLRKWLAANDFEIVAEDI 148 (230)
T ss_dssp --------EEEC-------HHHHHHHHHHTGGGGTTCCEEEEEESS------CHHHHHHHHHHTTEEEEEEEE
T ss_pred --------eCCc-------hHHHHHHHHHHHHHhCcCCEEEEECCC------ChHHHHHHHHHCCCEEEEEEE
Confidence 2221 234555554332211112345544332 266788889999999876544
No 170
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=95.89 E-value=0.05 Score=48.41 Aligned_cols=125 Identities=10% Similarity=-0.022 Sum_probs=77.5
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCCCchh
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPPCQPY 90 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~f 90 (390)
...+|||+-||.|.++.-+.+.|.+ |.++|+++.+++..+.+ -..+.+|+.+... .++...+|+++...-...
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~~~---v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~-~~~~~~fD~i~~~~~l~~- 113 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEEGIE---SIGVDINEDMIKFCEGK--FNVVKSDAIEYLK-SLPDKYLDGVMISHFVEH- 113 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHHTCC---EEEECSCHHHHHHHHTT--SEEECSCHHHHHH-TSCTTCBSEEEEESCGGG-
T ss_pred CCCeEEEEeCCCCHHHHHHHhCCCc---EEEEECCHHHHHHHHhh--cceeeccHHHHhh-hcCCCCeeEEEECCchhh-
Confidence 4578999999999999999998875 78999999999988877 3445667766421 233346999997532211
Q ss_pred hhccCCCCCCC-hhhhhHHHHHHhcccccCCCcEEEEecccccc-C------------hHHHHHHHHHHHhCCceeE
Q 016377 91 TRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVENVVGFE-T------------SDTHAKMIEILANSDYLTQ 153 (390)
Q Consensus 91 S~~g~~~~~~d-~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~-~------------~~~~~~~~~~l~~~GY~~~ 153 (390)
..+ ....++.++.++++- .-.+++..-.+.-. . ......+.+.|++.|+.+.
T Consensus 114 --------~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~ 179 (240)
T 3dli_A 114 --------LDPERLFELLSLCYSKMKY---SSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDV 179 (240)
T ss_dssp --------SCGGGHHHHHHHHHHHBCT---TCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEE
T ss_pred --------CCcHHHHHHHHHHHHHcCC---CcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEE
Confidence 111 224455566665443 22344432222110 0 0023567788888888743
No 171
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=95.85 E-value=0.045 Score=50.79 Aligned_cols=73 Identities=11% Similarity=-0.073 Sum_probs=54.1
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEE
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWL 82 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~ 82 (390)
....+|+|+.||.|..+..+..+......+.++|+++.+++..+.|... .++++|+.++.. . ..+|+++
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~-~~fD~v~ 192 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT---R-EGYDLLT 192 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC---C-SCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc---c-CCeEEEE
Confidence 3456899999999999988842222122699999999999999999864 246788888753 2 2599999
Q ss_pred eCCC
Q 016377 83 LSPP 86 (390)
Q Consensus 83 ~g~P 86 (390)
...+
T Consensus 193 ~~~~ 196 (305)
T 3ocj_A 193 SNGL 196 (305)
T ss_dssp CCSS
T ss_pred ECCh
Confidence 6544
No 172
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=95.85 E-value=0.025 Score=51.24 Aligned_cols=75 Identities=15% Similarity=0.119 Sum_probs=58.4
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccEEE
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHAWL 82 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~ 82 (390)
....+|||+-||.|.++..+...+.. .|.++|+++.+++..+.+.. . .++++|+.++. ++...+|+++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~i~ 119 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHVTG--QVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP---FRNEELDLIW 119 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTCSS--EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---CCTTCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhccCC--EEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC---CCCCCEEEEE
Confidence 45679999999999999999988653 79999999999988888763 1 34678888764 2333599999
Q ss_pred eCCCCch
Q 016377 83 LSPPCQP 89 (390)
Q Consensus 83 ~g~PCq~ 89 (390)
.......
T Consensus 120 ~~~~~~~ 126 (267)
T 3kkz_A 120 SEGAIYN 126 (267)
T ss_dssp ESSCGGG
T ss_pred EcCCcee
Confidence 8766544
No 173
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=95.83 E-value=0.067 Score=51.51 Aligned_cols=129 Identities=17% Similarity=0.167 Sum_probs=82.9
Q ss_pred CCCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhc-------------CC-CCeecCccccchh---
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNF-------------GH-RPYQGNIQNLTAA--- 71 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~-------------~~-~~~~~di~~~~~~--- 71 (390)
....+|||+-||.|.++.-+... |- .-.|.++|+++.+++.-+.|. +. ..+.+|+.++...
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGE-HGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTT-TCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 34568999999999999888774 21 116999999999999888874 12 3467898887432
Q ss_pred hhcccCccEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecccccc-Ch---------------
Q 016377 72 ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE-TS--------------- 135 (390)
Q Consensus 72 ~~~~~~~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~-~~--------------- 135 (390)
.++...+|+++.......+ .| ...++.++.++++- .-.+++.+-...-. ..
T Consensus 161 ~~~~~~fD~V~~~~~l~~~---------~d-~~~~l~~~~r~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLS---------TN-KLALFKEIHRVLRD---GGELYFSDVYADRRLSEAAQQDPILYGECLGG 227 (383)
T ss_dssp CCCTTCEEEEEEESCGGGC---------SC-HHHHHHHHHHHEEE---EEEEEEEEEEESSCCCHHHHHCHHHHHTTCTT
T ss_pred CCCCCCEEEEEEccchhcC---------CC-HHHHHHHHHHHcCC---CCEEEEEEeccccccCHhHhhhHHHhhccccc
Confidence 3444469999976543221 22 34556667776553 23444444332211 10
Q ss_pred -HHHHHHHHHHHhCCcee
Q 016377 136 -DTHAKMIEILANSDYLT 152 (390)
Q Consensus 136 -~~~~~~~~~l~~~GY~~ 152 (390)
...+.+.+.|++.|+..
T Consensus 228 ~~~~~~~~~ll~~aGF~~ 245 (383)
T 4fsd_A 228 ALYLEDFRRLVAEAGFRD 245 (383)
T ss_dssp CCBHHHHHHHHHHTTCCC
T ss_pred CCCHHHHHHHHHHCCCce
Confidence 02378889999999964
No 174
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=95.76 E-value=0.11 Score=45.26 Aligned_cols=127 Identities=10% Similarity=0.051 Sum_probs=82.6
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCCCch
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPPCQP 89 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~ 89 (390)
....+|||+-||.|.++.-+ +. .+.++|+++. .-..+.+|+.++. ++...+|+++.+....
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l---~~---~v~~~D~s~~---------~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~- 126 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI---RN---PVHCFDLASL---------DPRVTVCDMAQVP---LEDESVDVAVFCLSLM- 126 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC---CS---CEEEEESSCS---------STTEEESCTTSCS---CCTTCEEEEEEESCCC-
T ss_pred CCCCeEEEECCcCCHHHHHh---hc---cEEEEeCCCC---------CceEEEeccccCC---CCCCCEeEEEEehhcc-
Confidence 34578999999999987766 33 5889999977 2345678888753 3333599999754321
Q ss_pred hhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEEEEeCCCCcCCCccCc
Q 016377 90 YTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRP 169 (390)
Q Consensus 90 fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l~a~~~G~pq~R~ 169 (390)
. .+...++.++.++++. .-.+++.|....+.+ ...+.+.|++.|+.+.........
T Consensus 127 ---------~-~~~~~~l~~~~~~L~~---gG~l~i~~~~~~~~~---~~~~~~~l~~~Gf~~~~~~~~~~~-------- 182 (215)
T 2zfu_A 127 ---------G-TNIRDFLEEANRVLKP---GGLLKVAEVSSRFED---VRTFLRAVTKLGFKIVSKDLTNSH-------- 182 (215)
T ss_dssp ---------S-SCHHHHHHHHHHHEEE---EEEEEEEECGGGCSC---HHHHHHHHHHTTEEEEEEECCSTT--------
T ss_pred ---------c-cCHHHHHHHHHHhCCC---CeEEEEEEcCCCCCC---HHHHHHHHHHCCCEEEEEecCCCe--------
Confidence 1 2234456666666654 346777776654433 567788899999988775443322
Q ss_pred EEEEEEEeCC
Q 016377 170 RYFCLAKRKP 179 (390)
Q Consensus 170 R~~~i~~~~~ 179 (390)
.+++++.+.+
T Consensus 183 ~~~~~~~k~~ 192 (215)
T 2zfu_A 183 FFLFDFQKTG 192 (215)
T ss_dssp CEEEEEEECS
T ss_pred EEEEEEEecC
Confidence 3556666654
No 175
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=95.75 E-value=0.057 Score=48.36 Aligned_cols=128 Identities=10% Similarity=0.051 Sum_probs=73.6
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhc-----------CC-CCeecCccccchhhhcccCc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-----------GH-RPYQGNIQNLTAAELDMYGA 78 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~-----------~~-~~~~~di~~~~~~~~~~~~~ 78 (390)
...++||+-||.|.++..+....- ...+.|+|+++.+++.-+.+. ++ .++.+|+.+.-+..+....+
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 456899999999999999887632 126999999999887655432 11 34678887732222444468
Q ss_pred cEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCC
Q 016377 79 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSD 149 (390)
Q Consensus 79 D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~G 149 (390)
|.++..+|...+.....++.. ....++.++.++++- .-.+++.-.+. ..+..+++.|...|
T Consensus 125 D~v~~~~~dp~~k~~h~krr~--~~~~~l~~~~~~Lkp---GG~l~~~td~~-----~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRI--ISPTLLAEYAYVLRV---GGLVYTITDVL-----ELHDWMCTHFEEHP 185 (235)
T ss_dssp EEEEEESCC-----------C--CCHHHHHHHHHHEEE---EEEEEEEESCH-----HHHHHHHHHHHTST
T ss_pred eEEEEeCCCchhhhhhhhhhh--hhHHHHHHHHHHCCC---CCEEEEEeCCH-----HHHHHHHHHHHHCC
Confidence 999888776554322111111 012455566665543 23344433332 24666777777664
No 176
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=95.69 E-value=0.013 Score=51.10 Aligned_cols=72 Identities=15% Similarity=-0.044 Sum_probs=55.5
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC------CCeecCccccchhhhcccCccEEEe
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH------RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~------~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
....+|||+.||.|.++.-+...|. .|.++|+++.+++.-+.|+.. .++.+|+.+.... ...+|+++.
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~---~~~~D~i~~ 149 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLVQ---HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQA---RAPFDAIIV 149 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG---GCCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCC---EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCcc---CCCccEEEE
Confidence 3457899999999999999988864 599999999999988887632 3466787775432 225999998
Q ss_pred CCCC
Q 016377 84 SPPC 87 (390)
Q Consensus 84 g~PC 87 (390)
...+
T Consensus 150 ~~~~ 153 (210)
T 3lbf_A 150 TAAP 153 (210)
T ss_dssp SSBC
T ss_pred ccch
Confidence 7654
No 177
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=95.69 E-value=0.11 Score=46.02 Aligned_cols=109 Identities=17% Similarity=0.158 Sum_probs=71.2
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
..-+|+|+.||.|.++..+...+. .+.++|+++.+++.-+.|.. . ..+.+|+.+... .+..+|+++.
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~D~v~~ 164 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEVAG---EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV---PEGIFHAAFV 164 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSS---EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC---CTTCBSEEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHhCC---EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc---CCCcccEEEE
Confidence 456899999999999999888743 69999999999998888752 1 235677766431 2225999998
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhC
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANS 148 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~ 148 (390)
.+| +. ...+.++.++++. .-.+++..... .....+.+.|.+.
T Consensus 165 ~~~--------------~~-~~~l~~~~~~L~~---gG~l~~~~~~~-----~~~~~~~~~l~~~ 206 (248)
T 2yvl_A 165 DVR--------------EP-WHYLEKVHKSLME---GAPVGFLLPTA-----NQVIKLLESIENY 206 (248)
T ss_dssp CSS--------------CG-GGGHHHHHHHBCT---TCEEEEEESSH-----HHHHHHHHHSTTT
T ss_pred CCc--------------CH-HHHHHHHHHHcCC---CCEEEEEeCCH-----HHHHHHHHHHHhh
Confidence 655 11 2345666665543 33444444321 2355666666665
No 178
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=95.63 E-value=0.028 Score=49.45 Aligned_cols=99 Identities=13% Similarity=0.145 Sum_probs=65.4
Q ss_pred CceEEeeecCchhHHHHHHhc---CCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcc---cCc
Q 016377 12 AWRVLEFYSGIGGMRYSLMKA---DVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDM---YGA 78 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~a---G~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~---~~~ 78 (390)
.-+|||+.||.|..+.-+... +. .|.++|+++.+++..+.|+.. .++++|+.+..+..... ..+
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDG---TLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCC---EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 458999999999999999886 32 699999999999888888631 24677876653322110 259
Q ss_pred cEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccc
Q 016377 79 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130 (390)
Q Consensus 79 D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~ 130 (390)
|+++..++. .....++..+.++++. --++++.|+.
T Consensus 142 D~v~~~~~~-------------~~~~~~l~~~~~~L~p----gG~lv~~~~~ 176 (225)
T 3tr6_A 142 DLIYIDADK-------------ANTDLYYEESLKLLRE----GGLIAVDNVL 176 (225)
T ss_dssp EEEEECSCG-------------GGHHHHHHHHHHHEEE----EEEEEEECSS
T ss_pred cEEEECCCH-------------HHHHHHHHHHHHhcCC----CcEEEEeCCC
Confidence 999966541 1112234444444432 3577788874
No 179
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=95.62 E-value=0.0055 Score=56.50 Aligned_cols=118 Identities=8% Similarity=0.013 Sum_probs=75.6
Q ss_pred ceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC----CCeecCccccchhhhc-ccCccEEEeCCCC
Q 016377 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH----RPYQGNIQNLTAAELD-MYGAHAWLLSPPC 87 (390)
Q Consensus 13 ~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~----~~~~~di~~~~~~~~~-~~~~D~l~~g~PC 87 (390)
-.++|||+|.|++.+-+-+ |.+ -+..+|.++.++++.+.|+.. .++..|..+.-..-.+ ...+|++..-||=
T Consensus 93 ~~~LDlfaGSGaLgiEaLS-~~d--~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPY 169 (283)
T 2oo3_A 93 NSTLSYYPGSPYFAINQLR-SQD--RLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSY 169 (283)
T ss_dssp SSSCCEEECHHHHHHHHSC-TTS--EEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCC
T ss_pred CCceeEeCCcHHHHHHHcC-CCC--eEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCC
Confidence 4589999999998888877 435 899999999999999999964 3466776553222112 1259999999991
Q ss_pred chhhhccCCCCCCChhhhhHHHHHHhccccc---CCCcEEEEeccccccChHHHHHHHHHHHhCCc
Q 016377 88 QPYTRQGLQKQSSDARAFSFLKILELIPHTV---KPPHMLFVENVVGFETSDTHAKMIEILANSDY 150 (390)
Q Consensus 88 q~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~---~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY 150 (390)
+ ..+ .+..++..+.... ..--++++=-|. +....+.+.+.|++.|-
T Consensus 170 ------e----~k~----~~~~vl~~L~~~~~r~~~Gi~v~WYPi~---~~~~~~~~~~~l~~~~~ 218 (283)
T 2oo3_A 170 ------E----RKE----EYKEIPYAIKNAYSKFSTGLYCVWYPVV---NKAWTEQFLRKMREISS 218 (283)
T ss_dssp ------C----STT----HHHHHHHHHHHHHHHCTTSEEEEEEEES---SHHHHHHHHHHHHHHCS
T ss_pred ------C----CCc----HHHHHHHHHHHhCccCCCeEEEEEEecc---chHHHHHHHHHHHhcCC
Confidence 1 011 2333333332210 123455655553 34457788888886664
No 180
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=95.62 E-value=0.016 Score=50.04 Aligned_cols=65 Identities=14% Similarity=0.041 Sum_probs=51.5
Q ss_pred eEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----CCeecCccccchhhhcccCccEEEeC
Q 016377 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 14 ~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
+|||+.||.|.++..+...|. .+.++|+++.+++.-+.+... ..+++|+.++. ++...+|+++..
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~ 101 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFD---IVADAWEGIVSI 101 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBS---CCTTTCSEEEEE
T ss_pred CEEEECCCCCHhHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcC---CCcCCccEEEEE
Confidence 999999999999999999886 499999999998888777631 34667887763 333359999964
No 181
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=95.60 E-value=0.056 Score=50.78 Aligned_cols=121 Identities=7% Similarity=0.006 Sum_probs=77.3
Q ss_pred CceEEeeecCchhHHHHHHh--cCCCccEEEEEcccHHHHHHHHHhcCC------CCeecCccccchhhhcccCccEEEe
Q 016377 12 AWRVLEFYSGIGGMRYSLMK--ADVSAQVVEAFDINDKANDVYELNFGH------RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~--aG~~~~~v~a~e~~~~a~~~~~~n~~~------~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
.++||+|-||.|++..-+.+ .+. .+.++|+|+..++.-+.+++. .++.+|..++... +....+|+|+.
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~---~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~-~~~~~fDvIi~ 165 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQS---RNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAES-FTPASRDVIIR 165 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTC---EEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHT-CCTTCEEEEEE
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCc---EEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhh-ccCCCCCEEEE
Confidence 57999999999999998887 353 478999999999999999863 2467888775322 22235999998
Q ss_pred CCCCchhhhccCCCCCCChhhhhH-HHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhC
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSF-LKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANS 148 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~-~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~ 148 (390)
..+... +.. ..|+ .++++.+..+ .+|.=+++=|+..-.....+..+++.|.+.
T Consensus 166 D~~~~~----~~~-------~~L~t~efl~~~~r~-LkpgGvlv~~~~~~~~~~~~~~~~~tL~~v 219 (317)
T 3gjy_A 166 DVFAGA----ITP-------QNFTTVEFFEHCHRG-LAPGGLYVANCGDHSDLRGAKSELAGMMEV 219 (317)
T ss_dssp CCSTTS----CCC-------GGGSBHHHHHHHHHH-EEEEEEEEEEEEECTTCHHHHHHHHHHHHH
T ss_pred CCCCcc----ccc-------hhhhHHHHHHHHHHh-cCCCcEEEEEecCCcchHHHHHHHHHHHHH
Confidence 654321 110 1111 3333333332 167766666665433334566677777664
No 182
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=95.58 E-value=0.13 Score=46.36 Aligned_cols=117 Identities=13% Similarity=0.053 Sum_probs=75.9
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccEEEeC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
.-+|+|+.||.|-+++.+...|- ...|+|+|+++.|++.-+.|.. + .+..+|..+.... +..+|+++.
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~---~~~~D~Ivi- 96 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQT-ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK---KDAIDTIVI- 96 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---GGCCCEEEE-
T ss_pred CCEEEEECCccHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc---cccccEEEE-
Confidence 35899999999999999999874 2369999999999999999853 1 2356776654321 113898763
Q ss_pred CCCchhhhccCCCCCCChhhhhHHHHHHhcc-cccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEEE
Q 016377 85 PPCQPYTRQGLQKQSSDARAFSFLKILELIP-HTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEF 155 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~-~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~ 155 (390)
+|.. +.++.+++.-.. .+ ..-.++|+-=.. ....+.+.|.+.||.+...
T Consensus 97 --------agmG-------g~lI~~IL~~~~~~L-~~~~~lIlq~~~------~~~~lr~~L~~~Gf~i~~E 146 (244)
T 3gnl_A 97 --------AGMG-------GTLIRTILEEGAAKL-AGVTKLILQPNI------AAWQLREWSEQNNWLITSE 146 (244)
T ss_dssp --------EEEC-------HHHHHHHHHHTGGGG-TTCCEEEEEESS------CHHHHHHHHHHHTEEEEEE
T ss_pred --------eCCc-------hHHHHHHHHHHHHHh-CCCCEEEEEcCC------ChHHHHHHHHHCCCEEEEE
Confidence 2221 234555553332 33 122455554332 2566778889999998554
No 183
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=95.57 E-value=0.035 Score=49.78 Aligned_cols=71 Identities=11% Similarity=0.038 Sum_probs=55.9
Q ss_pred CCceEEeeecCchhHHHHHHhc--CCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhhcccCccEEEeCCCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA--DVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSPPC 87 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a--G~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~~~~~~D~l~~g~PC 87 (390)
...+|||+-||.|.++..+... +. .+.++|+++..++..+.+.+. ..+.+|+.++. ....+|+++.....
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~----~~~~fD~v~~~~~l 105 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVN---VITGIDSDDDMLEKAADRLPNTNFGKADLATWK----PAQKADLLYANAVF 105 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTT---SEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC----CSSCEEEEEEESCG
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHhCCCcEEEECChhhcC----ccCCcCEEEEeCch
Confidence 4568999999999999999887 54 489999999999999888665 45678888775 12259999986543
Q ss_pred c
Q 016377 88 Q 88 (390)
Q Consensus 88 q 88 (390)
+
T Consensus 106 ~ 106 (259)
T 2p35_A 106 Q 106 (259)
T ss_dssp G
T ss_pred h
Confidence 3
No 184
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=95.54 E-value=0.024 Score=54.66 Aligned_cols=69 Identities=17% Similarity=0.128 Sum_probs=53.3
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccEEE
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHAWL 82 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~ 82 (390)
...-+|||+.||.|.+++-+.++|.. .|.++|++ ..++..+.+.. + .++.+|+.++... + .+|+++
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~--~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~-~~D~Iv 134 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGAR--KVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP---E-KVDVII 134 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCS--EEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS---S-CEEEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCC--EEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC---C-cceEEE
Confidence 34578999999999999999999975 89999999 66666555542 2 3578899887532 2 599999
Q ss_pred eCC
Q 016377 83 LSP 85 (390)
Q Consensus 83 ~g~ 85 (390)
..+
T Consensus 135 ~~~ 137 (376)
T 3r0q_C 135 SEW 137 (376)
T ss_dssp ECC
T ss_pred EcC
Confidence 754
No 185
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=95.54 E-value=0.13 Score=45.86 Aligned_cols=118 Identities=10% Similarity=0.006 Sum_probs=77.8
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccc-cchhhhcccCccEEEe
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQN-LTAAELDMYGAHAWLL 83 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~-~~~~~~~~~~~D~l~~ 83 (390)
.-+|+|+.||.|.+++.+...|. ...|+|+|+++.|++.-+.|... .+..+|..+ +...+ .+|+++.
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~----~~D~Ivi 90 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETD----QVSVITI 90 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGG----CCCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCc----CCCEEEE
Confidence 46899999999999999999874 23699999999999999988631 235667643 22211 3897763
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcc-cccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEEEEe
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIP-HTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFIL 157 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~-~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l 157 (390)
+|.. +.++.+++.-.. .+ ..-.++++.=+. ....+.+.|.+.||.+....+
T Consensus 91 ---------aG~G-------g~~i~~Il~~~~~~L-~~~~~lVlq~~~------~~~~vr~~L~~~Gf~i~~e~l 142 (225)
T 3kr9_A 91 ---------AGMG-------GRLIARILEEGLGKL-ANVERLILQPNN------REDDLRIWLQDHGFQIVAESI 142 (225)
T ss_dssp ---------EEEC-------HHHHHHHHHHTGGGC-TTCCEEEEEESS------CHHHHHHHHHHTTEEEEEEEE
T ss_pred ---------cCCC-------hHHHHHHHHHHHHHh-CCCCEEEEECCC------CHHHHHHHHHHCCCEEEEEEE
Confidence 1221 234555554333 33 123567775542 256677888999999876543
No 186
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=95.53 E-value=0.041 Score=52.41 Aligned_cols=70 Identities=17% Similarity=0.111 Sum_probs=52.6
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhc-----CC--CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-----GH--RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~-----~~--~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
..-+|||+.||.|.++..+.++|.. .|+|+|+++ +++..+.+. ++ .++.+|+.++. ++...+|+++.
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~--~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~Iis 139 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGAR--KVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVE---LPVEKVDIIIS 139 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCS--EEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC---CSSSCEEEEEE
T ss_pred CCCEEEEEeccchHHHHHHHHCCCC--EEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHcc---CCCCceEEEEE
Confidence 3468999999999999999999865 899999995 555555443 22 35788998883 33336999998
Q ss_pred CCC
Q 016377 84 SPP 86 (390)
Q Consensus 84 g~P 86 (390)
.++
T Consensus 140 ~~~ 142 (349)
T 3q7e_A 140 EWM 142 (349)
T ss_dssp CCC
T ss_pred ccc
Confidence 653
No 187
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=95.51 E-value=0.026 Score=49.88 Aligned_cols=73 Identities=15% Similarity=0.073 Sum_probs=57.0
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC----CCeecCccccchhhhcccCccEEEeCCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH----RPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~----~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
..-+|||+.||.|.++..+...| . .+.++|+++.+++..+.+... .++.+|+.+... ....+|+++...+
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~-~--~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~---~~~~fD~v~~~~~ 143 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIV-D--KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE---EEKPYDRVVVWAT 143 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS-S--EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG---GGCCEEEEEESSB
T ss_pred CCCEEEEEcCCCCHHHHHHHHHc-C--EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc---cCCCccEEEECCc
Confidence 45689999999999999999988 3 699999999999999999864 346678776221 1225999998877
Q ss_pred Cch
Q 016377 87 CQP 89 (390)
Q Consensus 87 Cq~ 89 (390)
+..
T Consensus 144 ~~~ 146 (231)
T 1vbf_A 144 APT 146 (231)
T ss_dssp BSS
T ss_pred HHH
Confidence 643
No 188
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=95.49 E-value=0.042 Score=49.28 Aligned_cols=71 Identities=18% Similarity=0.232 Sum_probs=55.3
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC----C-CCeecCccccchhhhcccCccEEEeC
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG----H-RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~----~-~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
....+|||+.||.|.++..+...|. .+.++|+++.+++..+.+.. . ..+.+|+.++. +....+|+++..
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~ 111 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGY---RYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP---LPDESVHGVIVV 111 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTC---EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC---SCTTCEEEEEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCC---EEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC---CCCCCeeEEEEC
Confidence 4457999999999999999998874 59999999999999988862 2 34678887764 333359999976
Q ss_pred CC
Q 016377 85 PP 86 (390)
Q Consensus 85 ~P 86 (390)
..
T Consensus 112 ~~ 113 (263)
T 2yqz_A 112 HL 113 (263)
T ss_dssp SC
T ss_pred Cc
Confidence 44
No 189
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=95.44 E-value=0.014 Score=51.50 Aligned_cols=102 Identities=17% Similarity=0.118 Sum_probs=66.5
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhc----ccCccE
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELD----MYGAHA 80 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~----~~~~D~ 80 (390)
.-+|||+.||.|..++-+..+--..-.|.++|+++.+++..+.|... .++.+|+.++.+. +. ...+|+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~-~~~~~~~~~fD~ 137 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQ-LKKKYDVDTLDM 137 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGG-TTTTSCCCCCSE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHH-HHHhcCCCceEE
Confidence 45899999999999999987410012699999999999988887531 3467887664332 22 125999
Q ss_pred EEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCC-cEEEEeccc
Q 016377 81 WLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPP-HMLFVENVV 130 (390)
Q Consensus 81 l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P-~~~~~ENV~ 130 (390)
++...++..+. -..++++.+..+ +| -++++.|+.
T Consensus 138 V~~d~~~~~~~--------------~~~~~~~~~~~L--kpgG~lv~~~~~ 172 (221)
T 3u81_A 138 VFLDHWKDRYL--------------PDTLLLEKCGLL--RKGTVLLADNVI 172 (221)
T ss_dssp EEECSCGGGHH--------------HHHHHHHHTTCC--CTTCEEEESCCC
T ss_pred EEEcCCcccch--------------HHHHHHHhcccc--CCCeEEEEeCCC
Confidence 99765433221 122333333455 45 577888885
No 190
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=95.43 E-value=0.079 Score=47.36 Aligned_cols=124 Identities=12% Similarity=0.013 Sum_probs=77.1
Q ss_pred CCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccEEE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHAWL 82 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~ 82 (390)
...+|||+-||.|.++..+... |. .+.++|+++..++..+.+.. . ..+++|+.++.. ...+|+++
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~fD~V~ 108 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDHGI---TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA----NEKCDVAA 108 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHTCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC----SSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCC---eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc----CCCCCEEE
Confidence 4568999999999999988875 54 47999999999888887753 1 346788887653 22599999
Q ss_pred eCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecccc-ccCh---------------HHHHHHHHHHH
Q 016377 83 LSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG-FETS---------------DTHAKMIEILA 146 (390)
Q Consensus 83 ~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~-~~~~---------------~~~~~~~~~l~ 146 (390)
.......+ .| ...++.++.++++- .-.+++.+.... .... .....+.+.|+
T Consensus 109 ~~~~~~~~---------~~-~~~~l~~~~r~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (256)
T 1nkv_A 109 CVGATWIA---------GG-FAGAEELLAQSLKP---GGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFD 175 (256)
T ss_dssp EESCGGGT---------SS-SHHHHHHHTTSEEE---EEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHH
T ss_pred ECCChHhc---------CC-HHHHHHHHHHHcCC---CeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHH
Confidence 74332111 12 22334444444332 234555543211 1000 02367888899
Q ss_pred hCCceeEE
Q 016377 147 NSDYLTQE 154 (390)
Q Consensus 147 ~~GY~~~~ 154 (390)
+.||.+..
T Consensus 176 ~aGf~~~~ 183 (256)
T 1nkv_A 176 DLGYDVVE 183 (256)
T ss_dssp TTTBCCCE
T ss_pred HCCCeeEE
Confidence 99997654
No 191
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=95.42 E-value=0.13 Score=47.50 Aligned_cols=68 Identities=12% Similarity=0.090 Sum_probs=53.0
Q ss_pred CCCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEE
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAW 81 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l 81 (390)
....+|||+-||.|+++.-+... |. .|.++|+++..++.-+.+... .++.+|+.++ . ..+|++
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~-~~fD~v 141 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYDV---NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-----D-EPVDRI 141 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC---EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-----C-CCCSEE
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-----C-CCccEE
Confidence 34568999999999999999887 84 599999999999888887632 2467788766 2 259999
Q ss_pred EeCCC
Q 016377 82 LLSPP 86 (390)
Q Consensus 82 ~~g~P 86 (390)
+....
T Consensus 142 ~~~~~ 146 (302)
T 3hem_A 142 VSLGA 146 (302)
T ss_dssp EEESC
T ss_pred EEcch
Confidence 97644
No 192
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=95.42 E-value=0.12 Score=47.06 Aligned_cols=88 Identities=13% Similarity=0.088 Sum_probs=64.4
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhhcccCccEEEeCCCCch
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSPPCQP 89 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~ 89 (390)
...+|||+-||.|.++..+...|. .|.++|+++..++..+.+.+. ..+.+|+.++.. .+ .+|+++.......
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~---~~-~fD~v~~~~~l~~ 129 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGA---EVLGTDNAATMIEKARQNYPHLHFDVADARNFRV---DK-PLDAVFSNAMLHW 129 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC---SS-CEEEEEEESCGGG
T ss_pred CCCEEEEecCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc---CC-CcCEEEEcchhhh
Confidence 456899999999999999998664 589999999999998888865 567789888653 22 5999997654322
Q ss_pred hhhccCCCCCCChhhhhHHHHHHhcc
Q 016377 90 YTRQGLQKQSSDARAFSFLKILELIP 115 (390)
Q Consensus 90 fS~~g~~~~~~d~r~~l~~~~~~~i~ 115 (390)
+ .| ...++.++.++++
T Consensus 130 ~---------~d-~~~~l~~~~~~Lk 145 (279)
T 3ccf_A 130 V---------KE-PEAAIASIHQALK 145 (279)
T ss_dssp C---------SC-HHHHHHHHHHHEE
T ss_pred C---------cC-HHHHHHHHHHhcC
Confidence 2 12 2345666666554
No 193
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=95.41 E-value=0.069 Score=48.61 Aligned_cols=113 Identities=16% Similarity=0.162 Sum_probs=73.6
Q ss_pred CCceEEeeecCchhHHHHHHhc-C-CCccEEEEEcccHHHHHHHHHhc----C---C--CCeecCccccchhhhcccCcc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-D-VSAQVVEAFDINDKANDVYELNF----G---H--RPYQGNIQNLTAAELDMYGAH 79 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G-~~~~~v~a~e~~~~a~~~~~~n~----~---~--~~~~~di~~~~~~~~~~~~~D 79 (390)
..-+|||+.||.|.++..+... | .. .+.++|+++.+++..+.|. + . .++.+|+.+.. +....+|
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~---~~~~~~D 173 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAVGPAG--QVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE---LPDGSVD 173 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTS--EEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC---CCTTCEE
T ss_pred CCCEEEEEcccccHHHHHHHHHhCCCC--EEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC---CCCCcee
Confidence 4458999999999999999874 3 22 6999999999988888775 2 2 34567887763 2223599
Q ss_pred EEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHh-CCce
Q 016377 80 AWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILAN-SDYL 151 (390)
Q Consensus 80 ~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~-~GY~ 151 (390)
+++..+|. . ...+.++.++++. .-.+++.. +.. .....++..|.+ .||.
T Consensus 174 ~v~~~~~~--------------~-~~~l~~~~~~L~p---gG~l~~~~--~~~---~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 174 RAVLDMLA--------------P-WEVLDAVSRLLVA---GGVLMVYV--ATV---TQLSRIVEALRAKQCWT 223 (280)
T ss_dssp EEEEESSC--------------G-GGGHHHHHHHEEE---EEEEEEEE--SSH---HHHHHHHHHHHHHSSBC
T ss_pred EEEECCcC--------------H-HHHHHHHHHhCCC---CCEEEEEe--CCH---HHHHHHHHHHHhcCCcC
Confidence 99975541 1 2346666665543 23344433 221 345667777776 6764
No 194
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=95.30 E-value=0.02 Score=50.98 Aligned_cols=70 Identities=17% Similarity=0.065 Sum_probs=54.3
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
...+|||+.||.|.++..+...+.. .+.++|+++..++.-+.+... ..+++|+.++.. .+.+..+|+++.
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~-~~~~~~fD~V~~ 134 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAP-TLPDGHFDGILY 134 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGG-GSCTTCEEEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCC--eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhc-ccCCCceEEEEE
Confidence 4579999999999999999877754 789999999999988888742 346778777532 233336999997
No 195
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=95.28 E-value=0.051 Score=47.88 Aligned_cols=74 Identities=11% Similarity=-0.026 Sum_probs=52.5
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcc----cCccE
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDM----YGAHA 80 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~----~~~D~ 80 (390)
.-+|+|+.||.|..+..+..+.-....+.++|+++.+++.-+.|+. . .++.+|+.+.... +.. ..+|+
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~-~~~~~~~~~~D~ 148 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDE-LLAAGEAGTFDV 148 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHH-HHHTTCTTCEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHH-HHhcCCCCCccE
Confidence 4589999999999999998752111269999999999888887762 1 3456777654322 211 25999
Q ss_pred EEeCCC
Q 016377 81 WLLSPP 86 (390)
Q Consensus 81 l~~g~P 86 (390)
++..++
T Consensus 149 v~~d~~ 154 (229)
T 2avd_A 149 AVVDAD 154 (229)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 998765
No 196
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=95.26 E-value=0.12 Score=47.50 Aligned_cols=127 Identities=11% Similarity=0.065 Sum_probs=81.1
Q ss_pred CCCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccEE
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHAW 81 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l 81 (390)
....+|||+-||.|.++..+... |. .+.++|+++.+++.-+.+.. . ..+.+|+.++. ++...+|++
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~fD~v 154 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP---CEDNSYDFI 154 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS---SCTTCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC---CCCCCEeEE
Confidence 45679999999999999999886 75 58999999998887777652 1 34678888764 333359999
Q ss_pred EeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecccc-ccChH---------------HHHHHHHHH
Q 016377 82 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG-FETSD---------------THAKMIEIL 145 (390)
Q Consensus 82 ~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~-~~~~~---------------~~~~~~~~l 145 (390)
+....-..+ .+ ...++.++.++++- .-.+++.+-... ..... ....+.+.|
T Consensus 155 ~~~~~l~~~---------~~-~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 221 (297)
T 2o57_A 155 WSQDAFLHS---------PD-KLKVFQECARVLKP---RGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLA 221 (297)
T ss_dssp EEESCGGGC---------SC-HHHHHHHHHHHEEE---EEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHH
T ss_pred Eecchhhhc---------CC-HHHHHHHHHHHcCC---CeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence 875432222 22 34556667776654 235555553321 11100 234566778
Q ss_pred HhCCceeEEE
Q 016377 146 ANSDYLTQEF 155 (390)
Q Consensus 146 ~~~GY~~~~~ 155 (390)
++.|+.+...
T Consensus 222 ~~aGf~~~~~ 231 (297)
T 2o57_A 222 KECGLVTLRT 231 (297)
T ss_dssp HHTTEEEEEE
T ss_pred HHCCCeEEEE
Confidence 8888875443
No 197
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=95.25 E-value=0.087 Score=48.11 Aligned_cols=98 Identities=13% Similarity=0.123 Sum_probs=63.9
Q ss_pred CCceEEeeecCchhHHHHHH-hcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEE
Q 016377 11 EAWRVLEFYSGIGGMRYSLM-KADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWL 82 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~-~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~ 82 (390)
...+|||+-||.|+++.-+. ..|. .|.++|+++..++.-+.+... .++.+|+.++. ..+|+++
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------~~fD~v~ 134 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD------EPVDRIV 134 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC------CCCSEEE
T ss_pred CcCEEEEECCcccHHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC------CCeeEEE
Confidence 45689999999999998887 5575 589999999999888887532 24567776653 2599998
Q ss_pred eCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEec
Q 016377 83 LSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128 (390)
Q Consensus 83 ~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~EN 128 (390)
....-..++ .+....++.++.++++- .-.+++.+-
T Consensus 135 ~~~~l~~~~--------~~~~~~~l~~~~~~Lkp---gG~l~~~~~ 169 (287)
T 1kpg_A 135 SIGAFEHFG--------HERYDAFFSLAHRLLPA---DGVMLLHTI 169 (287)
T ss_dssp EESCGGGTC--------TTTHHHHHHHHHHHSCT---TCEEEEEEE
T ss_pred EeCchhhcC--------hHHHHHHHHHHHHhcCC---CCEEEEEEe
Confidence 654322221 12234456666665543 234555443
No 198
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=95.24 E-value=0.027 Score=53.53 Aligned_cols=69 Identities=16% Similarity=0.052 Sum_probs=52.0
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
..-+|||+.||.|.+++-+.++|.. .|.|+|+++ .++..+.|.. . .++.+|+.++. ++...+|+++.
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~g~~--~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~~D~Ivs 137 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKAGAK--KVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVH---LPVEKVDVIIS 137 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCS--EEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC---CSCSCEEEEEE
T ss_pred CCCEEEEeeccCcHHHHHHHHcCCC--EEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhc---CCCCcEEEEEE
Confidence 3458999999999999999999865 799999996 6666555541 2 35678988873 33235999997
Q ss_pred CC
Q 016377 84 SP 85 (390)
Q Consensus 84 g~ 85 (390)
.+
T Consensus 138 ~~ 139 (340)
T 2fyt_A 138 EW 139 (340)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 199
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=95.21 E-value=0.12 Score=47.95 Aligned_cols=99 Identities=11% Similarity=0.146 Sum_probs=65.2
Q ss_pred CCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWL 82 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~ 82 (390)
...+|||+-||.|.++.-+... |. .|.++|+++..++.-+.+... .++.+|+.+++ + .+|+++
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-~fD~v~ 160 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERFDV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA-----E-PVDRIV 160 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC-----C-CCSEEE
T ss_pred CcCEEEEEcccchHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC-----C-CcCEEE
Confidence 4568999999999999988876 75 599999999999888887532 23567776653 2 599998
Q ss_pred eCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecc
Q 016377 83 LSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129 (390)
Q Consensus 83 ~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV 129 (390)
.......++ .++...++.++.++++- .-.+++.+-.
T Consensus 161 ~~~~l~~~~--------~~~~~~~l~~~~~~Lkp---gG~l~~~~~~ 196 (318)
T 2fk8_A 161 SIEAFEHFG--------HENYDDFFKRCFNIMPA---DGRMTVQSSV 196 (318)
T ss_dssp EESCGGGTC--------GGGHHHHHHHHHHHSCT---TCEEEEEEEE
T ss_pred EeChHHhcC--------HHHHHHHHHHHHHhcCC---CcEEEEEEec
Confidence 764422221 02233455555565443 3345554433
No 200
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=95.17 E-value=0.53 Score=41.06 Aligned_cols=144 Identities=10% Similarity=0.020 Sum_probs=80.4
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHh---cCC-CCeecCccccch-hhhcccCccEEEeCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELN---FGH-RPYQGNIQNLTA-AELDMYGAHAWLLSP 85 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n---~~~-~~~~~di~~~~~-~~~~~~~~D~l~~g~ 85 (390)
..-+|||+-||.|..+.-+...+-. ..|+|+|+++.+++....+ .++ ..+.+|+.+... ..+.+ .+|+++...
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~-~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~-~fD~V~~~~ 134 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDE-GIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVE-KVDLIYQDI 134 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTT-SEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCC-CEEEEEECC
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhccccc-ceeEEEEec
Confidence 4458999999999998887764212 2699999999865433221 222 345678776421 12232 599998762
Q ss_pred CCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccc--ccc-Ch-HHHHHHHHHHHhCCceeEEEEeCCCC
Q 016377 86 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV--GFE-TS-DTHAKMIEILANSDYLTQEFILSPLQ 161 (390)
Q Consensus 86 PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~--~~~-~~-~~~~~~~~~l~~~GY~~~~~~l~a~~ 161 (390)
+ ..+....++.++.++++. .-.+++.-... ... +. ..+..-++.|++. |.+...+--
T Consensus 135 ~------------~~~~~~~~l~~~~r~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~--- 195 (210)
T 1nt2_A 135 A------------QKNQIEILKANAEFFLKE---KGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKHGSL--- 195 (210)
T ss_dssp C------------STTHHHHHHHHHHHHEEE---EEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-SEEEEEEEC---
T ss_pred c------------ChhHHHHHHHHHHHHhCC---CCEEEEEEecCCccccCCHHHHHHHHHHHHHhh-cEEeeeecC---
Confidence 1 123333446667776654 23455442111 111 11 1343445568888 877665432
Q ss_pred cCCCccCcEEEEEEEe
Q 016377 162 FGVPYSRPRYFCLAKR 177 (390)
Q Consensus 162 ~G~pq~R~R~~~i~~~ 177 (390)
.|-.+.-++++|.|
T Consensus 196 --~p~~~~h~~~~~~~ 209 (210)
T 1nt2_A 196 --MPYHRDHIFIHAYR 209 (210)
T ss_dssp --TTTCTTEEEEEEEE
T ss_pred --CCCCCCcEEEEEEc
Confidence 13334566677654
No 201
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=95.17 E-value=0.063 Score=50.31 Aligned_cols=148 Identities=12% Similarity=0.064 Sum_probs=86.0
Q ss_pred CceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCC-----------CCeecCccccchhhhcccCcc
Q 016377 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH-----------RPYQGNIQNLTAAELDMYGAH 79 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~-----------~~~~~di~~~~~~~~~~~~~D 79 (390)
.-+|||+.||.|++..-+.+. +.. .+.++|+|+..++.-+.+++. .++.+|+.+.... ....+|
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~--~~~~fD 153 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVE--KAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLER--TEERYD 153 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCC--EEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHH--CCCCEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCC--EEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHh--cCCCcc
Confidence 468999999999999988775 333 799999999999988887631 2467788764322 122599
Q ss_pred EEEeCCCCchhhhccCCCCCCChhhhh-HHHHHHhcc-cccCCCcEEEEecccc-c-cChHHHHHHHHHHHhCCceeEEE
Q 016377 80 AWLLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIP-HTVKPPHMLFVENVVG-F-ETSDTHAKMIEILANSDYLTQEF 155 (390)
Q Consensus 80 ~l~~g~PCq~fS~~g~~~~~~d~r~~l-~~~~~~~i~-~~~~~P~~~~~ENV~~-~-~~~~~~~~~~~~l~~~GY~~~~~ 155 (390)
+|+..++... . ...+...| ..++++.+. .+ +|.=+++=|... . .....+..+.+.|.+..-.+...
T Consensus 154 ~Ii~d~~~~~-~-------~~~~~~~l~~~~~l~~~~~~L--kpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~ 223 (314)
T 1uir_A 154 VVIIDLTDPV-G-------EDNPARLLYTVEFYRLVKAHL--NPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSY 223 (314)
T ss_dssp EEEEECCCCB-S-------TTCGGGGGSSHHHHHHHHHTE--EEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEE
T ss_pred EEEECCCCcc-c-------ccCcchhccHHHHHHHHHHhc--CCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEE
Confidence 9998866422 0 01111122 123333222 33 564333333322 1 23346778888888775444332
Q ss_pred EeCCCCcCCCc-cCcEEEEEEEeC
Q 016377 156 ILSPLQFGVPY-SRPRYFCLAKRK 178 (390)
Q Consensus 156 ~l~a~~~G~pq-~R~R~~~i~~~~ 178 (390)
... +|. .-...|++|+++
T Consensus 224 ~~~-----vP~~~g~~~~~~as~~ 242 (314)
T 1uir_A 224 KNH-----IPGFFLNFGFLLASDA 242 (314)
T ss_dssp EEE-----EGGGTEEEEEEEEESS
T ss_pred EEe-----cCCCCCeEEEEEEECC
Confidence 211 122 234677888765
No 202
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=95.16 E-value=0.1 Score=47.17 Aligned_cols=126 Identities=13% Similarity=0.060 Sum_probs=77.7
Q ss_pred CCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccEEE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHAWL 82 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~ 82 (390)
...+|||+-||.|.++.-+... |. .|.++|+++..++..+.+.. . .++.+|+.++. ++...+|+++
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~fD~v~ 134 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATARDV---RVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP---FEDASFDAVW 134 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHSCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---SCTTCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC---CCCCCccEEE
Confidence 4569999999999999988774 53 69999999999888777653 1 34677887764 3333599998
Q ss_pred eCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecccc-ccCh------------------HHHHHHHH
Q 016377 83 LSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG-FETS------------------DTHAKMIE 143 (390)
Q Consensus 83 ~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~-~~~~------------------~~~~~~~~ 143 (390)
....-.. ..+. ..++.++.++++. .-.+++.+-+.. -... .....+.+
T Consensus 135 ~~~~l~~---------~~~~-~~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (273)
T 3bus_A 135 ALESLHH---------MPDR-GRALREMARVLRP---GGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYES 201 (273)
T ss_dssp EESCTTT---------SSCH-HHHHHHHHTTEEE---EEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHH
T ss_pred Eechhhh---------CCCH-HHHHHHHHHHcCC---CeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHH
Confidence 7544222 2222 3445555555443 234555553321 1110 01256677
Q ss_pred HHHhCCceeEEE
Q 016377 144 ILANSDYLTQEF 155 (390)
Q Consensus 144 ~l~~~GY~~~~~ 155 (390)
.|++.|+.+...
T Consensus 202 ~l~~aGf~~~~~ 213 (273)
T 3bus_A 202 DVRQAELVVTST 213 (273)
T ss_dssp HHHHTTCEEEEE
T ss_pred HHHHcCCeEEEE
Confidence 778888876443
No 203
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=95.13 E-value=0.033 Score=49.35 Aligned_cols=68 Identities=10% Similarity=0.014 Sum_probs=54.8
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC--CCeecCccccchhhhcccCccEEEeCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH--RPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~--~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
..-+|||+-||.|.++.-+...|.+ +.++|+++.+++..+.+.+. ..+++|+.++. ....+|+++...
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~~---v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~----~~~~fD~v~~~~ 111 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFND---ITCVEASEEAISHAQGRLKDGITYIHSRFEDAQ----LPRRYDNIVLTH 111 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCSC---EEEEESCHHHHHHHHHHSCSCEEEEESCGGGCC----CSSCEEEEEEES
T ss_pred CCCcEEEECCCCCHHHHHHHHhCCc---EEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcC----cCCcccEEEEhh
Confidence 3458999999999999999988864 88999999999999999874 45678888762 223599999764
No 204
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=95.13 E-value=0.028 Score=51.98 Aligned_cols=64 Identities=17% Similarity=0.358 Sum_probs=52.6
Q ss_pred eEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC---------CCeecCccccchhhhcccCccEEEeC
Q 016377 14 RVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH---------RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 14 ~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~---------~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
+|||+.||.|.++..+...|.+ |.++|+++.+++..+.+... .++++|+.++.. .+ .+|+++.+
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~-~fD~v~~~ 157 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGWE---VTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL---DK-RFGTVVIS 157 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTCC---EEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC---SC-CEEEEEEC
T ss_pred cEEEEeccCCHHHHHHHHcCCe---EEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc---CC-CcCEEEEC
Confidence 8999999999999999999865 89999999999998888753 256889988753 22 59987743
No 205
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=95.10 E-value=0.047 Score=48.82 Aligned_cols=67 Identities=19% Similarity=0.196 Sum_probs=52.9
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----CCeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
...+|||+.||.|.++..+...|. .+.++|+++.+++..+.+... ..+++|+.++.. .+ .+|+++..
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~---~~-~fD~v~~~ 112 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF---KN-EFDAVTMF 112 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC---CS-CEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhccc---CC-CccEEEEc
Confidence 346999999999999999999886 489999999999888877632 346788887643 22 49999853
No 206
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=95.10 E-value=0.025 Score=51.20 Aligned_cols=100 Identities=14% Similarity=0.125 Sum_probs=69.1
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCCCch
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPPCQP 89 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~ 89 (390)
....+|||+-||.|.++.-+.+.|. .|.++|+++..++..+.+..-..+++|+.++. ++...+|+++.......
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~ 106 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQGL---FVYAVEPSIVMRQQAVVHPQVEWFTGYAENLA---LPDKSVDGVISILAIHH 106 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTTC---EEEEECSCHHHHHSSCCCTTEEEECCCTTSCC---SCTTCBSEEEEESCGGG
T ss_pred CCCCEEEEEcCcccHHHHHHHhCCC---EEEEEeCCHHHHHHHHhccCCEEEECchhhCC---CCCCCEeEEEEcchHhh
Confidence 3457999999999999999998775 58899999988876555542245678887764 33335999997755332
Q ss_pred hhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecc
Q 016377 90 YTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129 (390)
Q Consensus 90 fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV 129 (390)
+ . +...++.++.++++ = -.+++++-.
T Consensus 107 ~---------~-~~~~~l~~~~~~Lk-g---G~~~~~~~~ 132 (261)
T 3ege_A 107 F---------S-HLEKSFQEMQRIIR-D---GTIVLLTFD 132 (261)
T ss_dssp C---------S-SHHHHHHHHHHHBC-S---SCEEEEEEC
T ss_pred c---------c-CHHHHHHHHHHHhC-C---cEEEEEEcC
Confidence 2 2 23456777777766 3 345555544
No 207
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=95.09 E-value=0.027 Score=51.61 Aligned_cols=71 Identities=11% Similarity=-0.059 Sum_probs=55.3
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
...+|||+.||.|.++..+...|.. .+.++|+++.+++..+.+.+. .++++|+.++... ....+|+++.
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~fD~v~~ 139 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIG--EYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD--LGKEFDVISS 139 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCS--EEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC--CSSCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC--CCCCcCEEEE
Confidence 4569999999999999999888864 799999999999988888753 2457788876321 2235999987
Q ss_pred CC
Q 016377 84 SP 85 (390)
Q Consensus 84 g~ 85 (390)
..
T Consensus 140 ~~ 141 (298)
T 1ri5_A 140 QF 141 (298)
T ss_dssp ES
T ss_pred Cc
Confidence 64
No 208
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=95.04 E-value=0.42 Score=50.27 Aligned_cols=75 Identities=15% Similarity=0.168 Sum_probs=51.5
Q ss_pred CCceEEeeecCchhHHHHHHhcC--CCccEEEEEcccHHHHHHH--HHhcCC----------CCeecCccccchhhhccc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKAD--VSAQVVEAFDINDKANDVY--ELNFGH----------RPYQGNIQNLTAAELDMY 76 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG--~~~~~v~a~e~~~~a~~~~--~~n~~~----------~~~~~di~~~~~~~~~~~ 76 (390)
...+|+|.+||.|++.+.+.... .+-..++|+|+|+.+++.- +.|.-. .+...|+.+.+.....
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~-- 398 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFA-- 398 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGT--
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccC--
Confidence 46799999999999999887643 1123589999999998877 555321 1223444443322222
Q ss_pred CccEEEeCCCC
Q 016377 77 GAHAWLLSPPC 87 (390)
Q Consensus 77 ~~D~l~~g~PC 87 (390)
.+|++++.||=
T Consensus 399 kFDVVIgNPPY 409 (878)
T 3s1s_A 399 NVSVVVMNPPY 409 (878)
T ss_dssp TEEEEEECCBC
T ss_pred CCCEEEECCCc
Confidence 59999999996
No 209
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=95.04 E-value=0.035 Score=52.43 Aligned_cols=74 Identities=26% Similarity=0.257 Sum_probs=52.9
Q ss_pred CCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcC---------------C--CCeecCccccchhh
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFG---------------H--RPYQGNIQNLTAAE 72 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~---------------~--~~~~~di~~~~~~~ 72 (390)
..-+|||+.||.|.++..+..+ |-. ..|.++|+++.+++..+.|.. . .++.+|+.+... .
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~-~ 182 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVGSQ-GRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE-D 182 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTT-CEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc-c
Confidence 4568999999999999999886 541 279999999999998888753 2 245778877532 2
Q ss_pred hcccCccEEEeCCC
Q 016377 73 LDMYGAHAWLLSPP 86 (390)
Q Consensus 73 ~~~~~~D~l~~g~P 86 (390)
+....+|+++...|
T Consensus 183 ~~~~~fD~V~~~~~ 196 (336)
T 2b25_A 183 IKSLTFDAVALDML 196 (336)
T ss_dssp -----EEEEEECSS
T ss_pred cCCCCeeEEEECCC
Confidence 33335999998765
No 210
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=95.04 E-value=0.038 Score=49.16 Aligned_cols=73 Identities=15% Similarity=0.105 Sum_probs=53.9
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccEEEeC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
.-+|||+.||.|..+..+..++- ...|.++|+++.+++.-+.|+. + .++.+|+.+..+..+. ..+|+++..
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-~~fD~V~~~ 149 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVND-KVYDMIFID 149 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTT-SCEEEEEEE
T ss_pred CCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhcc-CCccEEEEc
Confidence 46899999999999999998432 2269999999999988888863 1 3467888876431122 259999965
Q ss_pred CC
Q 016377 85 PP 86 (390)
Q Consensus 85 ~P 86 (390)
.+
T Consensus 150 ~~ 151 (232)
T 3ntv_A 150 AA 151 (232)
T ss_dssp TT
T ss_pred Cc
Confidence 43
No 211
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=95.01 E-value=0.026 Score=49.70 Aligned_cols=74 Identities=16% Similarity=0.029 Sum_probs=54.5
Q ss_pred CCCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCC-----------CCeecCccccchhhhcccC
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH-----------RPYQGNIQNLTAAELDMYG 77 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~-----------~~~~~di~~~~~~~~~~~~ 77 (390)
....+|||+.||.|+.+.-+... |.. ..|.++|+++.+++..+.|... .++.+|+.+.... ...
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~ 151 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCT-GKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE---EAP 151 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTT-CEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG---GCC
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCC-cEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc---CCC
Confidence 34569999999999999988875 421 2699999999998888777531 2456777654321 225
Q ss_pred ccEEEeCCCC
Q 016377 78 AHAWLLSPPC 87 (390)
Q Consensus 78 ~D~l~~g~PC 87 (390)
+|+++.+.+|
T Consensus 152 fD~i~~~~~~ 161 (226)
T 1i1n_A 152 YDAIHVGAAA 161 (226)
T ss_dssp EEEEEECSBB
T ss_pred cCEEEECCch
Confidence 9999999988
No 212
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=95.00 E-value=0.035 Score=48.19 Aligned_cols=67 Identities=13% Similarity=-0.063 Sum_probs=52.4
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhhcccCccEEEeCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
...+|||+.||.|.++.-+ |.. .+.++|+++.+++..+.+.+. ..+++|+.++. ++...+|+++...
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~ 103 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYP--QKVGVEPSEAMLAVGRRRAPEATWVRAWGEALP---FPGESFDVVLLFT 103 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCS--EEEEECCCHHHHHHHHHHCTTSEEECCCTTSCC---SCSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHhHHhC---CCC--eEEEEeCCHHHHHHHHHhCCCcEEEEcccccCC---CCCCcEEEEEEcC
Confidence 4569999999999988877 653 689999999999999998854 45677887764 3333599999654
No 213
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=94.97 E-value=0.036 Score=48.94 Aligned_cols=66 Identities=14% Similarity=0.100 Sum_probs=54.3
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
..-+|||+.||.|.++..+...|. .+.++|+++.+++..+.+++. ..+.+|+.++.. . ..+|+++.
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~---~-~~~D~v~~ 106 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL---G-RKFSAVVS 106 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC---S-SCEEEEEE
T ss_pred CCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc---C-CCCcEEEE
Confidence 456899999999999999998874 588999999999999999875 456788887643 2 25999994
No 214
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.95 E-value=0.02 Score=53.24 Aligned_cols=45 Identities=11% Similarity=0.079 Sum_probs=39.4
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG 57 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~ 57 (390)
...-.|||+|||.|...+.+...|.+ ++++|+++.+++.-+.|..
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g~~---~~g~e~~~~~~~~a~~r~~ 278 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWGRR---ALGVELVPRYAQLAKERFA 278 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCE---EEEEESCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCe---EEEEeCCHHHHHHHHHHHH
Confidence 34558999999999999999999964 8899999999999888864
No 215
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=94.95 E-value=0.17 Score=46.36 Aligned_cols=158 Identities=10% Similarity=0.035 Sum_probs=85.4
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCC-------------------------------
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR------------------------------- 59 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~------------------------------- 59 (390)
...+|||+-||.|....-+...+.. .|.++|+++.+++..+.+....
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFE--DITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCS--EEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCC--eEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 5578999999999854433333333 6999999999998777754421
Q ss_pred -----CeecCccc-cchh--hhcccCccEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecccc
Q 016377 60 -----PYQGNIQN-LTAA--ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131 (390)
Q Consensus 60 -----~~~~di~~-~~~~--~~~~~~~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~ 131 (390)
++.+|+.+ +... .++...+|+++...--..++ . .. ++....+.++.++++- .-.+++.+-...
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~---~--~~-~~~~~~l~~~~r~Lkp---GG~l~~~~~~~~ 219 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVS---P--DL-ASFQRALDHITTLLRP---GGHLLLIGALEE 219 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHC---S--SH-HHHHHHHHHHHTTEEE---EEEEEEEEEESC
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhc---C--CH-HHHHHHHHHHHHhcCC---CCEEEEEEecCc
Confidence 12337766 2211 13333599999764322211 0 00 1233445555555442 223444321111
Q ss_pred c----------cChHHHHHHHHHHHhCCceeEEE-EeC-CCCcCCC-ccCcEEEEEEEeCC
Q 016377 132 F----------ETSDTHAKMIEILANSDYLTQEF-ILS-PLQFGVP-YSRPRYFCLAKRKP 179 (390)
Q Consensus 132 ~----------~~~~~~~~~~~~l~~~GY~~~~~-~l~-a~~~G~p-q~R~R~~~i~~~~~ 179 (390)
- ......+.+.+.|++.|+.+... .+. ...|-.+ ..=.|+|.++.++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (289)
T 2g72_A 220 SWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLRTYIMPAHLQTGVDDVKGVFFAWAQKV 280 (289)
T ss_dssp CEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEECCGGGCCTTBCCCEEEEEEEEEC
T ss_pred ceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEeeEeeccccccccccCcceEEEEEEecc
Confidence 0 00013577888999999976443 333 2345433 23446666666654
No 216
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=94.90 E-value=0.052 Score=51.18 Aligned_cols=69 Identities=13% Similarity=0.083 Sum_probs=51.6
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccEEEeC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
.-+|||+.||.|.+++-+.++|.. .|+|+|+++ .++..+.+.. + .++.+|+.++. ++...+|+++..
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g~~--~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~~D~Ivs~ 112 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHGAK--HVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH---LPFPKVDIIISE 112 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCCS--EEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC---CSSSCEEEEEEC
T ss_pred CCEEEEecCccHHHHHHHHHCCCC--EEEEEChHH-HHHHHHHHHHHcCCCCCEEEEECchhhcc---CCCCcccEEEEe
Confidence 458999999999999999999865 899999994 5555555432 2 34678888874 332359999987
Q ss_pred CC
Q 016377 85 PP 86 (390)
Q Consensus 85 ~P 86 (390)
++
T Consensus 113 ~~ 114 (328)
T 1g6q_1 113 WM 114 (328)
T ss_dssp CC
T ss_pred Cc
Confidence 65
No 217
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=94.88 E-value=0.11 Score=47.49 Aligned_cols=101 Identities=9% Similarity=0.062 Sum_probs=68.7
Q ss_pred CCCCceEEeeecCchhHHHHHHhc---CCCccEEEEEcccHHHHHHHHHhcCC-----CCeecCccccchhhhcccCccE
Q 016377 9 DGEAWRVLEFYSGIGGMRYSLMKA---DVSAQVVEAFDINDKANDVYELNFGH-----RPYQGNIQNLTAAELDMYGAHA 80 (390)
Q Consensus 9 ~~~~~~~~dlF~G~Gg~~~g~~~a---G~~~~~v~a~e~~~~a~~~~~~n~~~-----~~~~~di~~~~~~~~~~~~~D~ 80 (390)
.....+|||+-||.|.++.-+... |. .+.++|+++.+++..+.+... ..+++|+.++.. .+ .+|+
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~---~~-~fD~ 92 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGS---KYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIEL---ND-KYDI 92 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTC---EEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCC---SS-CEEE
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCc---CC-CeeE
Confidence 345679999999999999999876 33 589999999999988888653 346788887653 22 5999
Q ss_pred EEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecc
Q 016377 81 WLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV 129 (390)
Q Consensus 81 l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV 129 (390)
++.......+ .|. ..++.++.++++- .-.+++.|..
T Consensus 93 v~~~~~l~~~---------~~~-~~~l~~~~~~Lkp---gG~l~~~~~~ 128 (284)
T 3gu3_A 93 AICHAFLLHM---------TTP-ETMLQKMIHSVKK---GGKIICFEPH 128 (284)
T ss_dssp EEEESCGGGC---------SSH-HHHHHHHHHTEEE---EEEEEEEECC
T ss_pred EEECChhhcC---------CCH-HHHHHHHHHHcCC---CCEEEEEecc
Confidence 9976532221 222 3456666665543 2345555544
No 218
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=94.82 E-value=0.22 Score=41.13 Aligned_cols=73 Identities=10% Similarity=0.048 Sum_probs=51.1
Q ss_pred CCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccch-----hhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTA-----AELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~-----~~~~~~~~D~l~~ 83 (390)
..-+|+|+.||.|+++..+.+. |-. ..+.++|+++ ..+. +. ..+.+|+.+... ..+....+|+++.
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~-~~v~~~D~~~-~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~ 94 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGK-GRIIACDLLP-MDPI-----VGVDFLQGDFRDELVMKALLERVGDSKVQVVMS 94 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTT-CEEEEEESSC-CCCC-----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCC-CeEEEEECcc-cccc-----CcEEEEEcccccchhhhhhhccCCCCceeEEEE
Confidence 4459999999999999998876 531 2689999998 5432 22 346778877631 1133336999999
Q ss_pred CCCCchh
Q 016377 84 SPPCQPY 90 (390)
Q Consensus 84 g~PCq~f 90 (390)
.+|+..+
T Consensus 95 ~~~~~~~ 101 (180)
T 1ej0_A 95 DMAPNMS 101 (180)
T ss_dssp CCCCCCC
T ss_pred CCCcccc
Confidence 9887654
No 219
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=94.81 E-value=0.31 Score=42.43 Aligned_cols=120 Identities=11% Similarity=0.103 Sum_probs=74.8
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCCCchhh
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPPCQPYT 91 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~fS 91 (390)
.-+|||+.||.|.++..+... .++|+++.+++..+.+ .-..+.+|+.++. +....+|+++....-..
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~-~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~-- 114 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR-GVFVLKGTAENLP---LKDESFDFALMVTTICF-- 114 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT-TCEEEECBTTBCC---SCTTCEEEEEEESCGGG--
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc-CCEEEEcccccCC---CCCCCeeEEEEcchHhh--
Confidence 568999999999998887543 8999999999988887 3345678887764 33335999997643221
Q ss_pred hccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecccc-c-----------------cChHHHHHHHHHHHhCCceeE
Q 016377 92 RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG-F-----------------ETSDTHAKMIEILANSDYLTQ 153 (390)
Q Consensus 92 ~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~-~-----------------~~~~~~~~~~~~l~~~GY~~~ 153 (390)
..+. ..++.++.++++. .-.+++.+.... . ........+.+.|++.|+.+.
T Consensus 115 -------~~~~-~~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~ 183 (219)
T 1vlm_A 115 -------VDDP-ERALKEAYRILKK---GGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEF 183 (219)
T ss_dssp -------SSCH-HHHHHHHHHHEEE---EEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEE
T ss_pred -------ccCH-HHHHHHHHHHcCC---CcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEE
Confidence 1222 3345555555443 122333322111 0 000135678888999999875
Q ss_pred EE
Q 016377 154 EF 155 (390)
Q Consensus 154 ~~ 155 (390)
..
T Consensus 184 ~~ 185 (219)
T 1vlm_A 184 KV 185 (219)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 220
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=94.80 E-value=0.084 Score=48.67 Aligned_cols=94 Identities=7% Similarity=-0.040 Sum_probs=64.8
Q ss_pred CCCceEEeeecCchhHHHHHHh--cCCCccEEEEEcccHHHHHHHHHhc-------CC-CCeecCccccchhh---hccc
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMK--ADVSAQVVEAFDINDKANDVYELNF-------GH-RPYQGNIQNLTAAE---LDMY 76 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~--aG~~~~~v~a~e~~~~a~~~~~~n~-------~~-~~~~~di~~~~~~~---~~~~ 76 (390)
....+|||+-||.|.++..+.+ .+.. .|.++|+++..++..+.+. +. ..+++|+.++...+ +...
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFE--QIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCS--EEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCC--EEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCC
Confidence 3567999999999999999986 3433 7999999999988888873 22 34688998875322 1113
Q ss_pred CccEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhccc
Q 016377 77 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPH 116 (390)
Q Consensus 77 ~~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~ 116 (390)
.+|+++......-+ +...++.++.++++-
T Consensus 113 ~fD~V~~~~~l~~~-----------~~~~~l~~~~~~Lkp 141 (299)
T 3g5t_A 113 KIDMITAVECAHWF-----------DFEKFQRSAYANLRK 141 (299)
T ss_dssp CEEEEEEESCGGGS-----------CHHHHHHHHHHHEEE
T ss_pred CeeEEeHhhHHHHh-----------CHHHHHHHHHHhcCC
Confidence 69999986543222 223456666666553
No 221
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=94.79 E-value=0.043 Score=49.48 Aligned_cols=99 Identities=12% Similarity=0.025 Sum_probs=64.9
Q ss_pred CceEEeeecCchhHHHHHHhc---CCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhh----cccC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKA---DVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAEL----DMYG 77 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~a---G~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~----~~~~ 77 (390)
.-+|||+.||.|..++.+..+ |. .+.++|+++..++.-+.|+.. .++.+|..++.+... ....
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~---~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDG---KILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTC---EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 458999999999999998876 43 699999999999888888642 245677766533211 1225
Q ss_pred ccEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccc
Q 016377 78 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130 (390)
Q Consensus 78 ~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~ 130 (390)
+|+++...++. .....+..+.++++. =-++++.||-
T Consensus 157 fD~V~~d~~~~-------------~~~~~l~~~~~~Lkp----GG~lv~d~~~ 192 (247)
T 1sui_A 157 YDFIFVDADKD-------------NYLNYHKRLIDLVKV----GGVIGYDNTL 192 (247)
T ss_dssp BSEEEECSCST-------------THHHHHHHHHHHBCT----TCCEEEECTT
T ss_pred EEEEEEcCchH-------------HHHHHHHHHHHhCCC----CeEEEEecCC
Confidence 99999764421 112334444443332 3577888873
No 222
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=94.77 E-value=0.018 Score=49.87 Aligned_cols=68 Identities=16% Similarity=0.117 Sum_probs=49.1
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhh-----hc----ccCccE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAE-----LD----MYGAHA 80 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~-----~~----~~~~D~ 80 (390)
...+||||.||.|+++.-+.+.+. .|.|+|+++.+ ..++ ..+++|+.+....+ +. + .+|+
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~~~---~V~gvD~~~~~------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~-~~D~ 94 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSLAR---KIISIDLQEME------EIAGVRFIRCDIFKETIFDDIDRALREEGIE-KVDD 94 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTTCS---EEEEEESSCCC------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCS-SEEE
T ss_pred CCCEEEEEeecCCHHHHHHHHcCC---cEEEEeccccc------cCCCeEEEEccccCHHHHHHHHHHhhcccCC-cceE
Confidence 457899999999999999988743 69999999742 1223 45789998865321 22 2 5999
Q ss_pred EEeCCCCc
Q 016377 81 WLLSPPCQ 88 (390)
Q Consensus 81 l~~g~PCq 88 (390)
++..+++.
T Consensus 95 Vlsd~~~~ 102 (191)
T 3dou_A 95 VVSDAMAK 102 (191)
T ss_dssp EEECCCCC
T ss_pred EecCCCcC
Confidence 99876643
No 223
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=94.73 E-value=0.046 Score=48.16 Aligned_cols=79 Identities=13% Similarity=0.056 Sum_probs=55.6
Q ss_pred CCCceEEeeecCchhHHHHHHhcCC----CccEEEEEcccHHHHHHHHHhcC----------C-CCeecCccccchhh-h
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADV----SAQVVEAFDINDKANDVYELNFG----------H-RPYQGNIQNLTAAE-L 73 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~----~~~~v~a~e~~~~a~~~~~~n~~----------~-~~~~~di~~~~~~~-~ 73 (390)
...-+|||+.||.|.++.-+...+- ....|.++|+++.+++.-+.|.. . .++.+|+.+..... .
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 3456999999999999998887653 11269999999999888877742 1 34567887743110 1
Q ss_pred cccCccEEEeCCCCc
Q 016377 74 DMYGAHAWLLSPPCQ 88 (390)
Q Consensus 74 ~~~~~D~l~~g~PCq 88 (390)
....+|+++.+.++.
T Consensus 159 ~~~~fD~I~~~~~~~ 173 (227)
T 2pbf_A 159 ELGLFDAIHVGASAS 173 (227)
T ss_dssp HHCCEEEEEECSBBS
T ss_pred cCCCcCEEEECCchH
Confidence 122599999887764
No 224
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=94.66 E-value=0.026 Score=57.53 Aligned_cols=71 Identities=18% Similarity=0.154 Sum_probs=53.1
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC------CCeecCccccchhhhcccCccEEEe
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH------RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~------~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
...++|||+-||.|-++..|.+.|.+ |.++|..+.++++-+..... ...++|+.++... .....+|+++.
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga~---V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~fD~v~~ 140 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGAT---IVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAA-LEEGEFDLAIG 140 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTCE---EEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHH-CCTTSCSEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCCE---EEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhh-ccCCCccEEEE
Confidence 45689999999999999999999975 89999999998876655432 2345677666432 22235999986
Q ss_pred C
Q 016377 84 S 84 (390)
Q Consensus 84 g 84 (390)
.
T Consensus 141 ~ 141 (569)
T 4azs_A 141 L 141 (569)
T ss_dssp E
T ss_pred C
Confidence 4
No 225
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=94.43 E-value=0.06 Score=48.13 Aligned_cols=76 Identities=9% Similarity=-0.108 Sum_probs=53.0
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhh----cccCccE
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAEL----DMYGAHA 80 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~----~~~~~D~ 80 (390)
.-+|||+.||.|+.++-+..+--....+.++|+++..++.-+.|+.. .++.+|..++.+... ....+|+
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 150 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDF 150 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCE
Confidence 45899999999999999887510011699999999999998888742 245677766533211 1225999
Q ss_pred EEeCCCC
Q 016377 81 WLLSPPC 87 (390)
Q Consensus 81 l~~g~PC 87 (390)
++...+|
T Consensus 151 I~~d~~~ 157 (237)
T 3c3y_A 151 GFVDADK 157 (237)
T ss_dssp EEECSCG
T ss_pred EEECCch
Confidence 9976543
No 226
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=94.42 E-value=0.4 Score=50.67 Aligned_cols=71 Identities=20% Similarity=0.199 Sum_probs=53.7
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhc-----------CC-CCeecCccccchhhhcccCc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-----------GH-RPYQGNIQNLTAAELDMYGA 78 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~-----------~~-~~~~~di~~~~~~~~~~~~~ 78 (390)
..-+|||+.||.|.++..|.+.|-....|.++|+++.+++.-+.+. +. ..+++|+.++... ...+
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~---d~sF 797 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSR---LHDV 797 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTT---SCSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcc---cCCe
Confidence 4568999999999999999988721236999999999998887632 11 3468899887542 2359
Q ss_pred cEEEeC
Q 016377 79 HAWLLS 84 (390)
Q Consensus 79 D~l~~g 84 (390)
|+++..
T Consensus 798 DlVV~~ 803 (950)
T 3htx_A 798 DIGTCL 803 (950)
T ss_dssp CEEEEE
T ss_pred eEEEEe
Confidence 999974
No 227
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=94.35 E-value=0.076 Score=46.33 Aligned_cols=72 Identities=11% Similarity=0.118 Sum_probs=55.2
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCC
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
....+|||+.||.|.++.-+...|. .+.++|+++.+++.-+.+.. ..+.+|+.+... .+....+|+++.+..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~~~~~~~~~~~~~~-~~~~~d~~~~~~-~~~~~~fD~v~~~~~ 102 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGT---RVSGIEAFPEAAEQAKEKLD-HVVLGDIETMDM-PYEEEQFDCVIFGDV 102 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTC---EEEEEESSHHHHHHHHTTSS-EEEESCTTTCCC-CSCTTCEEEEEEESC
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCC-cEEEcchhhcCC-CCCCCccCEEEECCh
Confidence 3567999999999999999998873 69999999999988887764 556788876432 233335999997643
No 228
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=94.34 E-value=0.023 Score=51.83 Aligned_cols=113 Identities=10% Similarity=-0.061 Sum_probs=73.6
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhhcccCccEEEeCCCCchh
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSPPCQPY 90 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~f 90 (390)
.-+|||+=||.|.++..|...|. .|.|+|+++..++.-+. +++ ..+++|+.++. +++..+|+++.+--..
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~~~---~v~gvD~s~~ml~~a~~-~~~v~~~~~~~e~~~---~~~~sfD~v~~~~~~h-- 110 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEFFE---RVHAVDPGEAQIRQALR-HPRVTYAVAPAEDTG---LPPASVDVAIAAQAMH-- 110 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTTCS---EEEEEESCHHHHHTCCC-CTTEEEEECCTTCCC---CCSSCEEEEEECSCCT--
T ss_pred CCCEEEEcCCCCHHHHHHHHhCC---EEEEEeCcHHhhhhhhh-cCCceeehhhhhhhc---ccCCcccEEEEeeehh--
Confidence 45899999999999999999885 48899999988865433 343 45678888774 4444699999753221
Q ss_pred hhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHH
Q 016377 91 TRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILA 146 (390)
Q Consensus 91 S~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~ 146 (390)
.-|. ...+.++.|+++- .-.++++.+...... ..++.+++.+.
T Consensus 111 --------~~~~-~~~~~e~~rvLkp---gG~l~~~~~~~~~~~-~~~~~~~~~~~ 153 (257)
T 4hg2_A 111 --------WFDL-DRFWAELRRVARP---GAVFAAVTYGLTRVD-PEVDAVVDRLY 153 (257)
T ss_dssp --------TCCH-HHHHHHHHHHEEE---EEEEEEEEECCCBCC-HHHHHHHHHHH
T ss_pred --------HhhH-HHHHHHHHHHcCC---CCEEEEEECCCCCCC-HHHHHHHHHHH
Confidence 1122 3457777776653 345666666543333 23555555553
No 229
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=94.33 E-value=0.024 Score=53.82 Aligned_cols=71 Identities=13% Similarity=0.181 Sum_probs=54.3
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----CCeecCccccchhhhcccCccEEEeCCC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
.-+|+|+.||.|.++..+...+.+. .+.++|+++.+++.-+.|... .++.+|+.+.. ...+|+++..+|
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~-----~~~fD~Iv~~~~ 270 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKI-RLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV-----KGRFDMIISNPP 270 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTC-BCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC-----CSCEEEEEECCC
T ss_pred CCeEEEecCccCHHHHHHHHHCCCC-EEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc-----cCCeeEEEECCC
Confidence 3489999999999999998887422 488999999999888887632 34567776532 225999999998
Q ss_pred Cc
Q 016377 87 CQ 88 (390)
Q Consensus 87 Cq 88 (390)
..
T Consensus 271 ~~ 272 (343)
T 2pjd_A 271 FH 272 (343)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 230
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=94.30 E-value=0.058 Score=49.46 Aligned_cols=71 Identities=20% Similarity=0.067 Sum_probs=52.9
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC---------C-CCeecCccccchhhhcccCccE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG---------H-RPYQGNIQNLTAAELDMYGAHA 80 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~---------~-~~~~~di~~~~~~~~~~~~~D~ 80 (390)
...+|||+.||.|.++.-+...|. .|.++|+++.+++..+.+.. . .+..+|+.++..+-+....+|+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~ 133 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDA 133 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEE
Confidence 346899999999999999999986 48999999999988877641 1 2356777766422123336999
Q ss_pred EEeC
Q 016377 81 WLLS 84 (390)
Q Consensus 81 l~~g 84 (390)
++..
T Consensus 134 V~~~ 137 (293)
T 3thr_A 134 VICL 137 (293)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9964
No 231
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=94.23 E-value=0.05 Score=48.19 Aligned_cols=100 Identities=7% Similarity=-0.012 Sum_probs=64.5
Q ss_pred CceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCC--------CCeecCccccchhhhcccCccEEE
Q 016377 12 AWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH--------RPYQGNIQNLTAAELDMYGAHAWL 82 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~--------~~~~~di~~~~~~~~~~~~~D~l~ 82 (390)
..+|||+.||.|..++.+..+ +- .-.|.++|+++..++.-+.|+.. .++.+|..++.+. +....+|+++
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~-~~~~~fD~V~ 134 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLAD-NTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSR-LANDSYQLVF 134 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCT-TSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGG-SCTTCEEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHH-hcCCCcCeEE
Confidence 358999999999999999874 21 11689999999999888888632 2356777665332 2123599998
Q ss_pred eCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccc
Q 016377 83 LSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130 (390)
Q Consensus 83 ~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~ 130 (390)
...+.. ....++.++.++++. --++++.||-
T Consensus 135 ~d~~~~-------------~~~~~l~~~~~~Lkp----GG~lv~dn~~ 165 (221)
T 3dr5_A 135 GQVSPM-------------DLKALVDAAWPLLRR----GGALVLADAL 165 (221)
T ss_dssp ECCCTT-------------THHHHHHHHHHHEEE----EEEEEETTTT
T ss_pred EcCcHH-------------HHHHHHHHHHHHcCC----CcEEEEeCCC
Confidence 754311 112234444444332 3578888884
No 232
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=94.23 E-value=0.13 Score=48.11 Aligned_cols=127 Identities=12% Similarity=0.123 Sum_probs=83.2
Q ss_pred CCCceEEeeecCchhHHHHHHhc--CCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccE
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKA--DVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHA 80 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~a--G~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~ 80 (390)
....+|+|+-||.|.++..+.+. +. .+.++|++ .+++.-+.+.. + ..+.+|+.+. .+++ .+|+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~-~~D~ 235 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNA---EIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV---DYGN-DYDL 235 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTC---EEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS---CCCS-CEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCC---eEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC---CCCC-CCcE
Confidence 34579999999999999998876 43 58899999 88887777642 1 3456777765 2333 3999
Q ss_pred EEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccC---h------------------HHHH
Q 016377 81 WLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET---S------------------DTHA 139 (390)
Q Consensus 81 l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~---~------------------~~~~ 139 (390)
++.......++ +++...++.++.+.++. .-.++++|.+..-.. . ...+
T Consensus 236 v~~~~~l~~~~--------~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 304 (335)
T 2r3s_A 236 VLLPNFLHHFD--------VATCEQLLRKIKTALAV---EGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFA 304 (335)
T ss_dssp EEEESCGGGSC--------HHHHHHHHHHHHHHEEE---EEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHH
T ss_pred EEEcchhccCC--------HHHHHHHHHHHHHhCCC---CcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHH
Confidence 99865543331 12234556666665553 356888887654210 0 0245
Q ss_pred HHHHHHHhCCceeEEE
Q 016377 140 KMIEILANSDYLTQEF 155 (390)
Q Consensus 140 ~~~~~l~~~GY~~~~~ 155 (390)
++.+.|++.|+.+...
T Consensus 305 ~~~~ll~~aGf~~~~~ 320 (335)
T 2r3s_A 305 EYESMFSNAGFSHSQL 320 (335)
T ss_dssp HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHCCCCeeeE
Confidence 7788889999976543
No 233
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=94.12 E-value=0.074 Score=50.53 Aligned_cols=69 Identities=13% Similarity=0.131 Sum_probs=50.9
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhc-----CC--CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-----GH--RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~-----~~--~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
..-+|||+.||.|.++.-+.++|.. .|.++|+++. ++..+.+. .. .++.+|+.++.. ++ .+|+++.
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~~--~V~~vD~s~~-~~~a~~~~~~~~l~~~v~~~~~d~~~~~~---~~-~~D~Ivs 122 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGAR--KIYAVEASTM-AQHAEVLVKSNNLTDRIVVIPGKVEEVSL---PE-QVDIIIS 122 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCS--EEEEEECSTH-HHHHHHHHHHTTCTTTEEEEESCTTTCCC---SS-CEEEEEE
T ss_pred CcCEEEEcCCCccHHHHHHHhCCCC--EEEEECCHHH-HHHHHHHHHHcCCCCcEEEEEcchhhCCC---CC-ceeEEEE
Confidence 4468999999999999999999865 8999999963 34434332 12 356788888742 33 5999998
Q ss_pred CCC
Q 016377 84 SPP 86 (390)
Q Consensus 84 g~P 86 (390)
..+
T Consensus 123 ~~~ 125 (348)
T 2y1w_A 123 EPM 125 (348)
T ss_dssp CCC
T ss_pred eCc
Confidence 765
No 234
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=94.00 E-value=0.1 Score=48.83 Aligned_cols=76 Identities=13% Similarity=0.055 Sum_probs=56.2
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
..-+|||+.||.|.++.-+...+.+...|.++|+++..++.-+.|.. + .++.+|+.+.... ...+|+++..
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~---~~~fD~Iv~~ 151 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE---FSPYDVIFVT 151 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG---GCCEEEEEEC
T ss_pred CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc---CCCeEEEEEc
Confidence 45699999999999999888765321259999999999988888752 2 3456788775332 1259999998
Q ss_pred CCCch
Q 016377 85 PPCQP 89 (390)
Q Consensus 85 ~PCq~ 89 (390)
.++..
T Consensus 152 ~~~~~ 156 (317)
T 1dl5_A 152 VGVDE 156 (317)
T ss_dssp SBBSC
T ss_pred CCHHH
Confidence 88653
No 235
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=94.00 E-value=0.043 Score=47.44 Aligned_cols=67 Identities=12% Similarity=0.033 Sum_probs=50.0
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC------CCeecCccccchhhhcccCccEEEe
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH------RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~------~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
.-+|+|+.||.|.++..+....- ...+.++|+++.+++..+.|... .++.+|+.++.+ ...+|+++.
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----~~~~D~i~~ 138 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPS----EPPFDGVIS 138 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCC----CSCEEEEEC
T ss_pred CCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCc----cCCcCEEEE
Confidence 45899999999999999887521 12689999999999988887531 245678877642 125999985
No 236
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=93.90 E-value=0.086 Score=52.51 Aligned_cols=69 Identities=14% Similarity=0.160 Sum_probs=51.7
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
...+|+|+.||.|.+++-+.+.|.. .|.|+|+++ .++..+.|.. + .++.+|+.++. +++ .+|+|+.
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~~--~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~---~~~-~fD~Ivs 230 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGAR--KIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS---LPE-QVDIIIS 230 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTCS--EEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC---CSS-CEEEEEC
T ss_pred CCCEEEEecCcccHHHHHHHHcCCC--EEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc---cCC-CeEEEEE
Confidence 3468999999999999999888864 799999998 5555555431 2 34678888763 233 5999998
Q ss_pred CCC
Q 016377 84 SPP 86 (390)
Q Consensus 84 g~P 86 (390)
.++
T Consensus 231 ~~~ 233 (480)
T 3b3j_A 231 EPM 233 (480)
T ss_dssp CCC
T ss_pred eCc
Confidence 765
No 237
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=93.81 E-value=0.16 Score=43.73 Aligned_cols=71 Identities=13% Similarity=-0.036 Sum_probs=50.8
Q ss_pred CCCceEEeeecCchhHH-HHHHhcCCCccEEEEEcccHHHHHHHHHhcC----C-CCeecCccccchhhhcccCccEEEe
Q 016377 10 GEAWRVLEFYSGIGGMR-YSLMKADVSAQVVEAFDINDKANDVYELNFG----H-RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~-~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~----~-~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
....+|||+-||.|..+ .-+...|. .+.++|+++.+++..+.+.. . ..+++|+.++. ++...+|+++.
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~~~fD~v~~ 95 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGY---KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLP---FKDESMSFVYS 95 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTC---EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCC---SCTTCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCC---CCCCceeEEEE
Confidence 34579999999999874 44456675 48999999999888777642 2 45678888764 33335999997
Q ss_pred CCC
Q 016377 84 SPP 86 (390)
Q Consensus 84 g~P 86 (390)
...
T Consensus 96 ~~~ 98 (209)
T 2p8j_A 96 YGT 98 (209)
T ss_dssp CSC
T ss_pred cCh
Confidence 643
No 238
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=93.77 E-value=0.006 Score=55.07 Aligned_cols=71 Identities=14% Similarity=0.126 Sum_probs=53.5
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC----CCeecCccccchhhhcccCccEEEeCCC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH----RPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~----~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
..-+|+|+.||.|+++..+.+.| . .|.++|+++.+++..+.|... .++++|+.++...+ +..+ .+++.+|
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~-~--~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~--~~~f-~vv~n~P 102 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKIS-K--QVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPN--KQRY-KIVGNIP 102 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHS-S--EEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCC--SSEE-EEEEECC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC-C--eEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCccc--CCCc-EEEEeCC
Confidence 44689999999999999999887 3 699999999988877777642 35678888875221 1136 6788888
Q ss_pred C
Q 016377 87 C 87 (390)
Q Consensus 87 C 87 (390)
.
T Consensus 103 y 103 (245)
T 1yub_A 103 Y 103 (245)
T ss_dssp S
T ss_pred c
Confidence 4
No 239
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=93.69 E-value=0.033 Score=50.16 Aligned_cols=102 Identities=16% Similarity=0.084 Sum_probs=63.5
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhc---ccCccEE
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELD---MYGAHAW 81 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~---~~~~D~l 81 (390)
.-+|||+.||.|..++.+..+--..-.|.++|+++.+++.-+.|+. + .++.+|..++.+.... ...+|++
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 4589999999999999998741101269999999887666555542 2 3467888775433211 1259999
Q ss_pred EeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccc
Q 016377 82 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130 (390)
Q Consensus 82 ~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~ 130 (390)
+...++.. ....+.++.++++. =-++++.||-
T Consensus 141 ~~d~~~~~-------------~~~~l~~~~~~Lkp----GG~lv~d~~~ 172 (242)
T 3r3h_A 141 FIDADKTN-------------YLNYYELALKLVTP----KGLIAIDNIF 172 (242)
T ss_dssp EEESCGGG-------------HHHHHHHHHHHEEE----EEEEEEECSS
T ss_pred EEcCChHH-------------hHHHHHHHHHhcCC----CeEEEEECCc
Confidence 87654211 11234444444332 3578888885
No 240
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=93.61 E-value=0.12 Score=46.62 Aligned_cols=68 Identities=15% Similarity=0.125 Sum_probs=53.8
Q ss_pred CCceEEeeecCchhHHHHHHhc--CCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA--DVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a--G~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
...+|||+-||.|.++.-+... |. .+.++|+++.+++.-+.+.+. ..+.+|+.++. +....+|+++..
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~ 155 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEI---TTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLP---FSDTSMDAIIRI 155 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTS---EEEEEESCHHHHHHHHHHCTTSEEEECCTTSCS---BCTTCEEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCC---eEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCC---CCCCceeEEEEe
Confidence 4568999999999999998886 53 599999999999999988865 35677887764 233359999864
No 241
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=93.59 E-value=0.12 Score=44.98 Aligned_cols=132 Identities=12% Similarity=0.091 Sum_probs=72.2
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHH----Hh-----cCC-CCeecCccccchhhhcccCccE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYE----LN-----FGH-RPYQGNIQNLTAAELDMYGAHA 80 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~----~n-----~~~-~~~~~di~~~~~~~~~~~~~D~ 80 (390)
..-+|||+.||.|.++..+...+- ...|.++|+++.+++... .+ .+. ..+++|+.++.. .... |.
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~---~~~~-d~ 101 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPP---LSGV-GE 101 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCS---CCCE-EE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCC---CCCC-CE
Confidence 456899999999999999998731 126999999998665432 11 112 346788888643 2212 55
Q ss_pred EEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccc------------cChH-HHHHHHHHHHh
Q 016377 81 WLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF------------ETSD-THAKMIEILAN 147 (390)
Q Consensus 81 l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~------------~~~~-~~~~~~~~l~~ 147 (390)
+..-.+....- .. ...|. ..++.++.++++- .-.+++.-+.... .+.. ..+.+...|.+
T Consensus 102 v~~~~~~~~~~-~~---~~~~~-~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 173 (218)
T 3mq2_A 102 LHVLMPWGSLL-RG---VLGSS-PEMLRGMAAVCRP---GASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAE 173 (218)
T ss_dssp EEEESCCHHHH-HH---HHTSS-SHHHHHHHHTEEE---EEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHH
T ss_pred EEEEccchhhh-hh---hhccH-HHHHHHHHHHcCC---CcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHH
Confidence 55443311110 00 01111 2345566665543 2233332221111 0111 23447788899
Q ss_pred CCceeEEE
Q 016377 148 SDYLTQEF 155 (390)
Q Consensus 148 ~GY~~~~~ 155 (390)
.|+.+...
T Consensus 174 aGf~i~~~ 181 (218)
T 3mq2_A 174 AGWKLADC 181 (218)
T ss_dssp TTEEEEEE
T ss_pred cCCCceee
Confidence 99988665
No 242
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=93.54 E-value=0.1 Score=46.23 Aligned_cols=72 Identities=10% Similarity=0.019 Sum_probs=51.6
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC------CCeecCccccchhhhccc-CccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH------RPYQGNIQNLTAAELDMY-GAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~------~~~~~di~~~~~~~~~~~-~~D~l~~ 83 (390)
..-+|||+.||.|.++.-+...+-. .|.++|+++.+++.-+.|... .++.+|+.. .++.. .+|+++.
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~----~~~~~~~fD~Ii~ 164 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVKT--DVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK----GFPPKAPYDVIIV 164 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHCS--CEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG----CCGGGCCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCccc----CCCCCCCccEEEE
Confidence 4458999999999999998876522 589999999999888887632 234566621 12221 3899998
Q ss_pred CCCCc
Q 016377 84 SPPCQ 88 (390)
Q Consensus 84 g~PCq 88 (390)
+.++.
T Consensus 165 ~~~~~ 169 (235)
T 1jg1_A 165 TAGAP 169 (235)
T ss_dssp CSBBS
T ss_pred CCcHH
Confidence 76653
No 243
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=93.53 E-value=0.098 Score=48.61 Aligned_cols=73 Identities=12% Similarity=0.073 Sum_probs=53.7
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------------CCeecCccccch-hhhc--
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------------RPYQGNIQNLTA-AELD-- 74 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------------~~~~~di~~~~~-~~~~-- 74 (390)
...+|||+.||.|+++..+...+.. .+.++|+++.+++.-+.++.. ..+++|+.++.. +.+.
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRIN--KLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCC--EEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 4568999999999999999887644 799999999988887776531 346788887641 1121
Q ss_pred ccCccEEEeCC
Q 016377 75 MYGAHAWLLSP 85 (390)
Q Consensus 75 ~~~~D~l~~g~ 85 (390)
...+|+++...
T Consensus 112 ~~~fD~V~~~~ 122 (313)
T 3bgv_A 112 QMCFDICSCQF 122 (313)
T ss_dssp TCCEEEEEEET
T ss_pred CCCEEEEEEec
Confidence 12599999754
No 244
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=93.51 E-value=0.14 Score=46.44 Aligned_cols=102 Identities=16% Similarity=0.136 Sum_probs=67.7
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC------CCeecCccccchhhhcccCccEEEe
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH------RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~------~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
....+|||+.||.|.++..+...+-. ..+.++|+++..++..+.+... ..+.+|+.++.. ....+|+++.
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~---~~~~fD~v~~ 111 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPD-AEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPF---EDSSFDHIFV 111 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCS---CTTCEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCC---CCCCeeEEEE
Confidence 34679999999999999999987421 2699999999998888877531 345778887642 2335999997
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEec
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~EN 128 (390)
......+ .|. ..++.++.++++- .-.+++.+.
T Consensus 112 ~~~l~~~---------~~~-~~~l~~~~~~L~p---gG~l~~~~~ 143 (276)
T 3mgg_A 112 CFVLEHL---------QSP-EEALKSLKKVLKP---GGTITVIEG 143 (276)
T ss_dssp ESCGGGC---------SCH-HHHHHHHHHHEEE---EEEEEEEEE
T ss_pred echhhhc---------CCH-HHHHHHHHHHcCC---CcEEEEEEc
Confidence 6543322 222 2455666665543 234555553
No 245
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=93.32 E-value=0.047 Score=49.57 Aligned_cols=45 Identities=11% Similarity=0.014 Sum_probs=36.9
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhc
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF 56 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~ 56 (390)
....+|||+=||.|..+.-+...|+. .|.|+|+++.+++..+.+.
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~~--~v~g~D~s~~~l~~a~~~~ 98 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSFQ--DITLSDFTDRNREELEKWL 98 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTEE--EEEEEESCHHHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhhc--ceeeccccHHHHHHHHHHH
Confidence 34578999999999888777777865 8999999999998776653
No 246
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=93.32 E-value=0.11 Score=46.44 Aligned_cols=71 Identities=17% Similarity=0.069 Sum_probs=52.7
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----CCeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
..-+|||+-||.|..+.-+.+.+.. .+.++|+++..++..+.+... .++.+|..++... ++...+|.++.-
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~--~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~FD~i~~D 135 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPT-LPDGHFDGILYD 135 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGG-SCTTCEEEEEEC
T ss_pred CCCeEEEECCCccHHHHHHHHhCCc--EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhccc-ccccCCceEEEe
Confidence 4568999999999998888776533 688999999999998888754 2456776665432 344458988754
No 247
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=93.31 E-value=0.074 Score=53.83 Aligned_cols=74 Identities=19% Similarity=0.089 Sum_probs=50.5
Q ss_pred ceEEeeecCchhHHHHHHhc--------CCC------ccEEEEEcccHHHHHHHHHhc---C--CCC--eecCccccchh
Q 016377 13 WRVLEFYSGIGGMRYSLMKA--------DVS------AQVVEAFDINDKANDVYELNF---G--HRP--YQGNIQNLTAA 71 (390)
Q Consensus 13 ~~~~dlF~G~Gg~~~g~~~a--------G~~------~~~v~a~e~~~~a~~~~~~n~---~--~~~--~~~di~~~~~~ 71 (390)
-+|+|.+||.||+-+.+.+. +.+ -..++++|+++.+...-+.|. + ..+ .++|.-....
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~- 324 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQ- 324 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCS-
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcc-
Confidence 38999999999998876421 100 126999999999999888874 1 223 5566543321
Q ss_pred hhcccCccEEEeCCCCc
Q 016377 72 ELDMYGAHAWLLSPPCQ 88 (390)
Q Consensus 72 ~~~~~~~D~l~~g~PCq 88 (390)
.....+|++++.||=.
T Consensus 325 -~~~~~fD~Iv~NPPf~ 340 (544)
T 3khk_A 325 -HPDLRADFVMTNPPFN 340 (544)
T ss_dssp -CTTCCEEEEEECCCSS
T ss_pred -cccccccEEEECCCcC
Confidence 1223599999999953
No 248
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=93.25 E-value=0.18 Score=43.77 Aligned_cols=76 Identities=11% Similarity=-0.040 Sum_probs=53.8
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C-CCeecCccccchhhhcccCccEEEe
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H-RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~-~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
....+|||+.||.|.++.-+...+-....+.++|+++.+++.-+.+.. . ..+.+|+.+... ....+|+++.
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---~~~~fD~v~~ 152 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE---PLAPYDRIYT 152 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG---GGCCEEEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC---CCCCeeEEEE
Confidence 345699999999999999888865211269999999999888887753 2 235667643221 1225999998
Q ss_pred CCCCc
Q 016377 84 SPPCQ 88 (390)
Q Consensus 84 g~PCq 88 (390)
..++.
T Consensus 153 ~~~~~ 157 (215)
T 2yxe_A 153 TAAGP 157 (215)
T ss_dssp SSBBS
T ss_pred CCchH
Confidence 87754
No 249
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=93.18 E-value=0.059 Score=46.90 Aligned_cols=71 Identities=11% Similarity=0.028 Sum_probs=50.4
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEEeC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
.-+|||+.||.|..+..+..+--....|.++|+++.+++.-+.|+.. .++.+|..+..+. +. . +|+++..
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~-~-fD~v~~~ 133 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAG-QR-D-IDILFMD 133 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTT-CC-S-EEEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhcc-CC-C-CCEEEEc
Confidence 45899999999999999987611012689999999999988887642 2456777654221 22 2 8999876
Q ss_pred C
Q 016377 85 P 85 (390)
Q Consensus 85 ~ 85 (390)
.
T Consensus 134 ~ 134 (210)
T 3c3p_A 134 C 134 (210)
T ss_dssp T
T ss_pred C
Confidence 3
No 250
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=93.17 E-value=0.099 Score=46.06 Aligned_cols=74 Identities=11% Similarity=0.074 Sum_probs=53.3
Q ss_pred CCCceEEeeecCchhHHHHHHh-cCC------CccEEEEEcccHHHHHHHHHhcC----------C-CCeecCccccchh
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMK-ADV------SAQVVEAFDINDKANDVYELNFG----------H-RPYQGNIQNLTAA 71 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~-aG~------~~~~v~a~e~~~~a~~~~~~n~~----------~-~~~~~di~~~~~~ 71 (390)
....+|||+.||.|.++.-+.. .|. . .|.++|+++.+++..+.|.. . .++.+|+.+.-+.
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 160 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADT--RIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP 160 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTC--EEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccC--EEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc
Confidence 4456999999999999988876 342 2 69999999999888777642 2 3456777762111
Q ss_pred hhcccCccEEEeCCCCc
Q 016377 72 ELDMYGAHAWLLSPPCQ 88 (390)
Q Consensus 72 ~~~~~~~D~l~~g~PCq 88 (390)
...+|+++.+.++.
T Consensus 161 ---~~~fD~I~~~~~~~ 174 (227)
T 1r18_A 161 ---NAPYNAIHVGAAAP 174 (227)
T ss_dssp ---GCSEEEEEECSCBS
T ss_pred ---CCCccEEEECCchH
Confidence 12599999888764
No 251
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=93.00 E-value=0.24 Score=43.89 Aligned_cols=57 Identities=14% Similarity=0.063 Sum_probs=42.7
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCcccc
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNL 68 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~ 68 (390)
.-+|||+.||.|..+.-+....-....+.++|+++.+++.-+.|+.. .++.+|+.+.
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 124 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALET 124 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHH
Confidence 45899999999999999887631112699999999999888888621 2456777653
No 252
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=92.72 E-value=0.26 Score=45.39 Aligned_cols=44 Identities=18% Similarity=0.238 Sum_probs=37.2
Q ss_pred CCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNF 56 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~ 56 (390)
..-+|||+-||.|.++..+... +-. .|.++|+++.+++.-+.|.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~--~v~gvDis~~~i~~A~~~~ 90 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPS--RMVGLDIDSRLIHSARQNI 90 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCS--EEEEEESCHHHHHHHHHTC
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCC--EEEEECCCHHHHHHHHHHH
Confidence 4578999999999999998876 333 6999999999998888774
No 253
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=92.64 E-value=0.13 Score=48.62 Aligned_cols=74 Identities=15% Similarity=0.143 Sum_probs=54.0
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC----------CCeecCccccchhhhcccCccE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH----------RPYQGNIQNLTAAELDMYGAHA 80 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~----------~~~~~di~~~~~~~~~~~~~D~ 80 (390)
..-+|||+-||.|+++..+....- ...|.++|+++.+++.-+.|++. .++.+|+.+.... +....+|+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~-~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~-~~~~~fDl 197 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHAS-IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKN-AAEGSYDA 197 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHT-SCTTCEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHh-ccCCCccE
Confidence 346899999999999999887521 23799999999999999888741 2467787764221 22225999
Q ss_pred EEeCCC
Q 016377 81 WLLSPP 86 (390)
Q Consensus 81 l~~g~P 86 (390)
|+..++
T Consensus 198 Ii~d~~ 203 (334)
T 1xj5_A 198 VIVDSS 203 (334)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 998654
No 254
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=92.47 E-value=0.09 Score=45.12 Aligned_cols=52 Identities=12% Similarity=0.021 Sum_probs=36.2
Q ss_pred CceEEeeecCchhHHHHHHhcCCC-ccEEEEEcccHHHHHHHHHhcCC-CCeecCccccc
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVS-AQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLT 69 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~-~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~ 69 (390)
..+|+||.||.|+++.-+.+..-. ...|.|+|+++.+ ..+. ..+++|+.+..
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~------~~~~v~~~~~d~~~~~ 76 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD------PIPNVYFIQGEIGKDN 76 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC------CCTTCEEEECCTTTTS
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC------CCCCceEEEccccchh
Confidence 468999999999999998764210 1268999999842 1222 34677887764
No 255
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=92.43 E-value=0.11 Score=47.27 Aligned_cols=133 Identities=9% Similarity=-0.049 Sum_probs=81.3
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC----------CCeecCccccchhhhcccCccEE
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH----------RPYQGNIQNLTAAELDMYGAHAW 81 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~----------~~~~~di~~~~~~~~~~~~~D~l 81 (390)
.-+|||+.||.|+++..+...+ . .|.++|+|+..++.-+.+++. .++.+|..+.. ..+|+|
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~-~--~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~------~~fD~I 143 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYD-T--HIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI------KKYDLI 143 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSS-C--EEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC------CCEEEE
T ss_pred CCEEEEEeCCcCHHHHHHHhCC-C--EEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH------hhCCEE
Confidence 4589999999999998877766 5 899999999999988877653 23456666543 259999
Q ss_pred EeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccc-cccChHHHHHHHHHHHhCCceeEEEEeCCC
Q 016377 82 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV-GFETSDTHAKMIEILANSDYLTQEFILSPL 160 (390)
Q Consensus 82 ~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~-~~~~~~~~~~~~~~l~~~GY~~~~~~l~a~ 160 (390)
+...+ |+.. .+..+ .+.+ +|.=+++=+.. .+.....+..+.+.+.+..-.+. .. .
T Consensus 144 i~d~~--------------dp~~-~~~~~---~~~L--~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~--~~-~- 199 (262)
T 2cmg_A 144 FCLQE--------------PDIH-RIDGL---KRML--KEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAM--PF-V- 199 (262)
T ss_dssp EESSC--------------CCHH-HHHHH---HTTE--EEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEE--EE-C-
T ss_pred EECCC--------------ChHH-HHHHH---HHhc--CCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceE--EE-E-
Confidence 97632 2221 23323 3344 56544333332 22344456777777776522221 11 1
Q ss_pred CcCCCccCcEEEEEEEeC
Q 016377 161 QFGVPYSRPRYFCLAKRK 178 (390)
Q Consensus 161 ~~G~pq~R~R~~~i~~~~ 178 (390)
. -+|..-...|++|+++
T Consensus 200 ~-~vP~~g~~~~~~as~~ 216 (262)
T 2cmg_A 200 A-PLRILSNKGYIYASFK 216 (262)
T ss_dssp C-TTCTTCCEEEEEEESS
T ss_pred E-ccCCCcccEEEEeeCC
Confidence 1 2455455677888765
No 256
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=91.92 E-value=0.16 Score=44.96 Aligned_cols=74 Identities=14% Similarity=-0.008 Sum_probs=51.3
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhc--c--cCccE
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELD--M--YGAHA 80 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~--~--~~~D~ 80 (390)
.-+|||+.||.|..+..+..+--..-.+.++|+++.+++.-+.|+.. .++.+|+.+.... +. . ..+|+
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~-l~~~~~~~~fD~ 151 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQ-LTQGKPLPEFDL 151 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHH-HHTSSSCCCEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHH-HHhcCCCCCcCE
Confidence 45899999999999999987521012699999999999888877621 2456776653222 21 1 25999
Q ss_pred EEeCCC
Q 016377 81 WLLSPP 86 (390)
Q Consensus 81 l~~g~P 86 (390)
++...+
T Consensus 152 V~~d~~ 157 (232)
T 3cbg_A 152 IFIDAD 157 (232)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 987654
No 257
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=91.55 E-value=1.2 Score=42.29 Aligned_cols=128 Identities=10% Similarity=0.127 Sum_probs=81.7
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
..-+|+|+-||.|.++..+.+..-.. .+.++|+ +..++.-+.+... ..+.+|+.+... .+++ .+|+++.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~p~-~~D~v~~ 254 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEV-EVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDV-PFPT-GFDAVWM 254 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTC-EEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSC-CCCC-CCSEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCC-EEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCC-CCCC-CcCEEEE
Confidence 44689999999999999998853222 4889999 8888888887653 235677766420 1332 4999987
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChH------------------------HHH
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD------------------------THA 139 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~------------------------~~~ 139 (390)
..-...++ +++...++.++.+.++- .-++++.|.+..-.... ..+
T Consensus 255 ~~vlh~~~--------~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 323 (363)
T 3dp7_A 255 SQFLDCFS--------EEEVISILTRVAQSIGK---DSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSD 323 (363)
T ss_dssp ESCSTTSC--------HHHHHHHHHHHHHHCCT---TCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHH
T ss_pred echhhhCC--------HHHHHHHHHHHHHhcCC---CcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHH
Confidence 65433322 12223456666665554 46888888765421110 245
Q ss_pred HHHHHHHhCCceeE
Q 016377 140 KMIEILANSDYLTQ 153 (390)
Q Consensus 140 ~~~~~l~~~GY~~~ 153 (390)
++.+.|++.|+.+.
T Consensus 324 e~~~ll~~AGf~~v 337 (363)
T 3dp7_A 324 DLIRCIENAGLEVE 337 (363)
T ss_dssp HHHHHHHTTTEEES
T ss_pred HHHHHHHHcCCeEE
Confidence 67777788887653
No 258
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=91.51 E-value=0.71 Score=43.72 Aligned_cols=146 Identities=12% Similarity=0.075 Sum_probs=87.3
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
...+|+|+-||.|.++..+....-.. .+.++|+ +.+++.-+.+... ..+.+|+.+ .++. .+|+++.
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~-~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~-~~D~v~~ 254 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHL-RGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK----PLPV-TADVVLL 254 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS----CCSC-CEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCC-EEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC----cCCC-CCCEEEE
Confidence 45799999999999999998875322 5788999 8888887777521 235677764 2333 3899987
Q ss_pred CCCCchhhhccCCCCCCCh-hhhhHHHHHHhcccccCCCcEEEEec--cc-cccCh------------------HHHHHH
Q 016377 84 SPPCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVEN--VV-GFETS------------------DTHAKM 141 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~-r~~l~~~~~~~i~~~~~~P~~~~~EN--V~-~~~~~------------------~~~~~~ 141 (390)
......+ .++ ...++.++.+.++- .-.+++.|. +. .-... ...+.+
T Consensus 255 ~~vl~~~---------~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (374)
T 1qzz_A 255 SFVLLNW---------SDEDALTILRGCVRALEP---GGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEV 322 (374)
T ss_dssp ESCGGGS---------CHHHHHHHHHHHHHHEEE---EEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHH
T ss_pred eccccCC---------CHHHHHHHHHHHHHhcCC---CcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHH
Confidence 6543332 222 23456666665553 346788887 52 21000 024567
Q ss_pred HHHHHhCCceeEEE-EeCCCCcCCCccCcEEEEEEEeCC
Q 016377 142 IEILANSDYLTQEF-ILSPLQFGVPYSRPRYFCLAKRKP 179 (390)
Q Consensus 142 ~~~l~~~GY~~~~~-~l~a~~~G~pq~R~R~~~i~~~~~ 179 (390)
.+.|++.|+.+... .+... ...+...++.+.+.+
T Consensus 323 ~~ll~~aGf~~~~~~~~~~~----~~~~~~~~i~~~~~~ 357 (374)
T 1qzz_A 323 VDLAGSAGLALASERTSGST----TLPFDFSILEFTAVS 357 (374)
T ss_dssp HHHHHTTTEEEEEEEEECCS----SCSSCEEEEEEEECC
T ss_pred HHHHHHCCCceEEEEECCCC----cccCCcEEEEEEECc
Confidence 78889999976443 23211 112233556666654
No 259
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=91.50 E-value=0.11 Score=42.98 Aligned_cols=75 Identities=19% Similarity=0.154 Sum_probs=56.6
Q ss_pred CceEEeeecCch-hHHHHHHh-cCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEE-EeCCCCc
Q 016377 12 AWRVLEFYSGIG-GMRYSLMK-ADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAW-LLSPPCQ 88 (390)
Q Consensus 12 ~~~~~dlF~G~G-g~~~g~~~-aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l-~~g~PCq 88 (390)
.-+++|+=||.| -.+.-|.+ .|++ |.|+|+++.|++ .++.||.+-..+... .+|+| ..-||
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~~---V~atDInp~Av~---------~v~dDiF~P~~~~Y~--~~DLIYsirPP-- 99 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKVD---LVLTDIKPSHGG---------IVRDDITSPRMEIYR--GAALIYSIRPP-- 99 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCCE---EEEECSSCSSTT---------EECCCSSSCCHHHHT--TEEEEEEESCC--
T ss_pred CCcEEEEccCCChHHHHHHHHhCCCe---EEEEECCccccc---------eEEccCCCCcccccC--CcCEEEEcCCC--
Confidence 469999999999 58888886 9986 899999999987 777899875543223 48998 77777
Q ss_pred hhhhccCCCCCCChhhhhHHHHHHhcccc
Q 016377 89 PYTRQGLQKQSSDARAFSFLKILELIPHT 117 (390)
Q Consensus 89 ~fS~~g~~~~~~d~r~~l~~~~~~~i~~~ 117 (390)
..|...++++.+.+
T Consensus 100 ---------------~El~~~i~~lA~~v 113 (153)
T 2k4m_A 100 ---------------AEIHSSLMRVADAV 113 (153)
T ss_dssp ---------------TTTHHHHHHHHHHH
T ss_pred ---------------HHHHHHHHHHHHHc
Confidence 23555666666665
No 260
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=91.49 E-value=0.69 Score=43.60 Aligned_cols=126 Identities=16% Similarity=0.163 Sum_probs=79.6
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
...+|+|+.||.|.++..+...+.+. .+.++|+ +.+++.-+.|... ..+.+|+.+ .++. .+|+++.
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~-~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~-~~D~v~~ 255 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHV-SATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE----PLPR-KADAIIL 255 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS----CCSS-CEEEEEE
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCC-EEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC----CCCC-CccEEEE
Confidence 35689999999999999998876432 4677888 7887777766421 245677764 2333 3899887
Q ss_pred CCCCchhhhccCCCCCCCh-hhhhHHHHHHhcccccCCCcEEEEecc--ccccChH------------------HHHHHH
Q 016377 84 SPPCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENV--VGFETSD------------------THAKMI 142 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~-r~~l~~~~~~~i~~~~~~P~~~~~ENV--~~~~~~~------------------~~~~~~ 142 (390)
......+ .++ ...++.++.+.++. .-.+++.|.+ +.-.... ..+++.
T Consensus 256 ~~vl~~~---------~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~ 323 (360)
T 1tw3_A 256 SFVLLNW---------PDHDAVRILTRCAEALEP---GGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWD 323 (360)
T ss_dssp ESCGGGS---------CHHHHHHHHHHHHHTEEE---EEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHH
T ss_pred cccccCC---------CHHHHHHHHHHHHHhcCC---CcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHH
Confidence 6543332 222 23456666665543 3468888887 3211100 235677
Q ss_pred HHHHhCCceeEEE
Q 016377 143 EILANSDYLTQEF 155 (390)
Q Consensus 143 ~~l~~~GY~~~~~ 155 (390)
+.|++.|+.+...
T Consensus 324 ~ll~~aGf~~~~~ 336 (360)
T 1tw3_A 324 GLAASAGLVVEEV 336 (360)
T ss_dssp HHHHHTTEEEEEE
T ss_pred HHHHHCCCeEEEE
Confidence 8888999876543
No 261
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=91.44 E-value=0.54 Score=44.44 Aligned_cols=126 Identities=16% Similarity=0.158 Sum_probs=78.6
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhc-----CC--CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF-----GH--RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~-----~~--~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
..-+|+|+-||.|.++..+.+..-.. .+.++|+ +..++.-+.+. ++ ..+.+|+.+. .+++ .|+++.
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~--~D~v~~ 262 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFPEL-DSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE---SYPE--ADAVLF 262 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCTTC-EEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS---CCCC--CSEEEE
T ss_pred CCCEEEEECCcccHHHHHHHHHCCCC-eEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC---CCCC--CCEEEE
Confidence 45689999999999999998863222 4788999 88887777664 22 2456787765 2343 499987
Q ss_pred CCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccc----------------cCh------HHHHHH
Q 016377 84 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF----------------ETS------DTHAKM 141 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~----------------~~~------~~~~~~ 141 (390)
......++. +....++.++.+.++. .-.++++|.+..- -.+ ...+++
T Consensus 263 ~~vlh~~~d--------~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~ 331 (359)
T 1x19_A 263 CRILYSANE--------QLSTIMCKKAFDAMRS---GGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARY 331 (359)
T ss_dssp ESCGGGSCH--------HHHHHHHHHHHTTCCT---TCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGH
T ss_pred echhccCCH--------HHHHHHHHHHHHhcCC---CCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHH
Confidence 655433321 1233445555554443 4567788855321 001 234567
Q ss_pred HHHHHhCCceeEE
Q 016377 142 IEILANSDYLTQE 154 (390)
Q Consensus 142 ~~~l~~~GY~~~~ 154 (390)
.+.|++.|+.+..
T Consensus 332 ~~ll~~aGf~~v~ 344 (359)
T 1x19_A 332 KEILESLGYKDVT 344 (359)
T ss_dssp HHHHHHHTCEEEE
T ss_pred HHHHHHCCCceEE
Confidence 7788888987543
No 262
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=91.13 E-value=1.3 Score=42.16 Aligned_cols=127 Identities=11% Similarity=0.166 Sum_probs=82.7
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
...+|+|+-||.|..+..+.+..-.. .+.++|+ +..++.-+.++. . ....+|+.+ .++. .+|+++.
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~----~~p~-~~D~v~~ 274 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGL-RGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE----TIPD-GADVYLI 274 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT----CCCS-SCSEEEE
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCC-eEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC----CCCC-CceEEEh
Confidence 45799999999999999998873222 4788999 888887777653 2 235677762 2343 4999987
Q ss_pred CCCCchhhhccCCCCCCCh-hhhhHHHHHHhcccccCCCcEEEEeccccccCh------------------HHHHHHHHH
Q 016377 84 SPPCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVVGFETS------------------DTHAKMIEI 144 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~-r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~------------------~~~~~~~~~ 144 (390)
......| .|+ ...++.++.+.++- .-.+++.|.+..-... .+.+++.+.
T Consensus 275 ~~vlh~~---------~d~~~~~~L~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~l 342 (369)
T 3gwz_A 275 KHVLHDW---------DDDDVVRILRRIATAMKP---DSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAAL 342 (369)
T ss_dssp ESCGGGS---------CHHHHHHHHHHHHTTCCT---TCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHH
T ss_pred hhhhccC---------CHHHHHHHHHHHHHHcCC---CCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHH
Confidence 6554333 222 22455555555443 4578888877543111 124567788
Q ss_pred HHhCCceeEEEE
Q 016377 145 LANSDYLTQEFI 156 (390)
Q Consensus 145 l~~~GY~~~~~~ 156 (390)
|++.|+.+....
T Consensus 343 l~~aGf~~~~~~ 354 (369)
T 3gwz_A 343 LEKSGLRVERSL 354 (369)
T ss_dssp HHTTTEEEEEEE
T ss_pred HHHCCCeEEEEE
Confidence 899999876553
No 263
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=90.77 E-value=1.7 Score=39.99 Aligned_cols=119 Identities=11% Similarity=0.061 Sum_probs=65.6
Q ss_pred CCceEEeeec------CchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CC-eecCccccchhhhcccCccEEE
Q 016377 11 EAWRVLEFYS------GIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RP-YQGNIQNLTAAELDMYGAHAWL 82 (390)
Q Consensus 11 ~~~~~~dlF~------G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~-~~~di~~~~~~~~~~~~~D~l~ 82 (390)
...+||||.| |.|+ ....+..+-. -.|.|+|+++. .++ .+ +++|+.++.. .+ .+|+++
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs-~~~a~~~~~~-~~V~gvDis~~--------v~~v~~~i~gD~~~~~~---~~-~fD~Vv 128 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT-AVLRQWLPTG-TLLVDSDLNDF--------VSDADSTLIGDCATVHT---AN-KWDLII 128 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH-HHHHHHSCTT-CEEEEEESSCC--------BCSSSEEEESCGGGCCC---SS-CEEEEE
T ss_pred CCCEEEEeCCCCCCCCCcHH-HHHHHHcCCC-CEEEEEECCCC--------CCCCEEEEECccccCCc---cC-cccEEE
Confidence 3568999999 5577 5556665521 16999999987 133 56 7899987642 22 599999
Q ss_pred eCCCCchhhhccCCCCCCChh-hhhHHHHHHhcccccCCCc-EEEEeccccccChHHHHHHHHHHHhCCcee
Q 016377 83 LSPPCQPYTRQGLQKQSSDAR-AFSFLKILELIPHTVKPPH-MLFVENVVGFETSDTHAKMIEILANSDYLT 152 (390)
Q Consensus 83 ~g~PCq~fS~~g~~~~~~d~r-~~l~~~~~~~i~~~~~~P~-~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~ 152 (390)
..+++.. .|.. ..++.+ ..++.++++.+..+ .+|. .|+++ +... ...+.+.+.|++.||..
T Consensus 129 sn~~~~~---~g~~-~~d~~~~~~l~~~~l~~a~r~-LkpGG~~v~~-~~~~---~~~~~l~~~l~~~GF~~ 191 (290)
T 2xyq_A 129 SDMYDPR---TKHV-TKENDSKEGFFTYLCGFIKQK-LALGGSIAVK-ITEH---SWNADLYKLMGHFSWWT 191 (290)
T ss_dssp ECCCCCC------C-CSCCCCCCTHHHHHHHHHHHH-EEEEEEEEEE-ECSS---SCCHHHHHHHTTEEEEE
T ss_pred EcCCccc---cccc-cccccchHHHHHHHHHHHHHh-cCCCcEEEEE-Eecc---CCHHHHHHHHHHcCCcE
Confidence 8765332 1111 112222 22333444433332 1452 33332 1111 12457778888888753
No 264
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=90.60 E-value=0.22 Score=42.36 Aligned_cols=69 Identities=13% Similarity=0.081 Sum_probs=45.9
Q ss_pred CceEEeeecCchhHHHHHHhc-CCC-------ccEEEEEcccHHHHHHHHHhcCC-CCe-ecCccccchh-----hhccc
Q 016377 12 AWRVLEFYSGIGGMRYSLMKA-DVS-------AQVVEAFDINDKANDVYELNFGH-RPY-QGNIQNLTAA-----ELDMY 76 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~a-G~~-------~~~v~a~e~~~~a~~~~~~n~~~-~~~-~~di~~~~~~-----~~~~~ 76 (390)
.-+|||+.||.|+++..+... |-. -..|.++|+++.+ ..+. ..+ .+|+.+.... .+.+.
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PLEGATFLCPADVTDPRTSQRILEVLPGR 96 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CCTTCEEECSCCTTSHHHHHHHHHHSGGG
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc------cCCCCeEEEeccCCCHHHHHHHHHhcCCC
Confidence 468999999999999999876 530 0269999999842 1222 345 6777765321 12223
Q ss_pred CccEEEeCCC
Q 016377 77 GAHAWLLSPP 86 (390)
Q Consensus 77 ~~D~l~~g~P 86 (390)
.+|+++...+
T Consensus 97 ~fD~V~~~~~ 106 (196)
T 2nyu_A 97 RADVILSDMA 106 (196)
T ss_dssp CEEEEEECCC
T ss_pred CCcEEEeCCC
Confidence 5999998653
No 265
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=90.55 E-value=0.37 Score=41.80 Aligned_cols=68 Identities=13% Similarity=0.107 Sum_probs=48.8
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----CCeecCccccchhhhcccCccEEEeC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
.-+|+||=||.|.+++.+....-.. .++|+|+|+.+++.-+.|... .+...|..+ . .+...+|++.+-
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~---~-~~~~~~DvVLa~ 122 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKES---D-VYKGTYDVVFLL 122 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHH---H-HTTSEEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccc---c-CCCCCcChhhHh
Confidence 5599999999999999998764334 799999999999999999742 222333322 2 233347887753
No 266
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=90.43 E-value=0.73 Score=42.71 Aligned_cols=98 Identities=9% Similarity=0.080 Sum_probs=62.9
Q ss_pred CCCceEEeeecCchhHHH-HHHh-cCCCccEEEEEcccHHHHHHHHHhcC----C--CCeecCccccchhhhcccCccEE
Q 016377 10 GEAWRVLEFYSGIGGMRY-SLMK-ADVSAQVVEAFDINDKANDVYELNFG----H--RPYQGNIQNLTAAELDMYGAHAW 81 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~-g~~~-aG~~~~~v~a~e~~~~a~~~~~~n~~----~--~~~~~di~~~~~~~~~~~~~D~l 81 (390)
...-+|+|+=||.|+++. -+.. .|. .|.++|+++.+++.-+.+.. + .++++|+.++. ...+|++
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga---~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~-----d~~FDvV 192 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGM---RVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID-----GLEFDVL 192 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCC---EEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG-----GCCCSEE
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCC---EEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC-----CCCcCEE
Confidence 456799999999988763 3333 464 59999999999988888753 2 34678887763 2359999
Q ss_pred EeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccc
Q 016377 82 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 132 (390)
Q Consensus 82 ~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~ 132 (390)
+...- ..+....+.++.+.++- --.+++.+..++
T Consensus 193 ~~~a~-------------~~d~~~~l~el~r~LkP----GG~Lvv~~~~~~ 226 (298)
T 3fpf_A 193 MVAAL-------------AEPKRRVFRNIHRYVDT----ETRIIYRTYTGM 226 (298)
T ss_dssp EECTT-------------CSCHHHHHHHHHHHCCT----TCEEEEEECCGG
T ss_pred EECCC-------------ccCHHHHHHHHHHHcCC----CcEEEEEcCcch
Confidence 84321 12334456666665543 234445555444
No 267
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=90.00 E-value=0.94 Score=44.31 Aligned_cols=40 Identities=18% Similarity=0.222 Sum_probs=33.9
Q ss_pred CCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHH
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVY 52 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~ 52 (390)
..-+|||+.||.|.++..+... |.. .|+++|+++.+++.-
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g~~--~V~GVDis~~~l~~A 282 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECGCA--LSFGCEIMDDASDLT 282 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCS--EEEEEECCHHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCCCC--EEEEEeCCHHHHHHH
Confidence 4568999999999999998874 644 799999999987766
No 268
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=89.78 E-value=1.8 Score=41.65 Aligned_cols=128 Identities=9% Similarity=-0.057 Sum_probs=76.5
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhh--hcccCccEEEeCCCCc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAE--LDMYGAHAWLLSPPCQ 88 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~--~~~~~~D~l~~g~PCq 88 (390)
...+|||+-||.|.+..-+...|. .+.++|+++..++.-+.+.- .........-+... +....+|+++...--.
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~ 182 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGI-RVRTDFFEKATADDVRRTEGPANVIYAANTLC 182 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTC-CEECSCCSHHHHHHHHHHHCCEEEEEEESCGG
T ss_pred CCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCC-CcceeeechhhHhhcccCCCCEEEEEECChHH
Confidence 456999999999999999999986 48899999999988777621 11111111111111 2233699999764322
Q ss_pred hhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecc--cc---------ccCh----HHHHHHHHHHHhCCceeE
Q 016377 89 PYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV--VG---------FETS----DTHAKMIEILANSDYLTQ 153 (390)
Q Consensus 89 ~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV--~~---------~~~~----~~~~~~~~~l~~~GY~~~ 153 (390)
.+ .| ...++.++.++++- --+++++.- .. +... .....+...|++.|+.+.
T Consensus 183 h~---------~d-~~~~l~~~~r~Lkp----gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~ 248 (416)
T 4e2x_A 183 HI---------PY-VQSVLEGVDALLAP----DGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELV 248 (416)
T ss_dssp GC---------TT-HHHHHHHHHHHEEE----EEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEE
T ss_pred hc---------CC-HHHHHHHHHHHcCC----CeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEE
Confidence 22 22 34456666665543 124444421 11 1101 124678888999999875
Q ss_pred EEE
Q 016377 154 EFI 156 (390)
Q Consensus 154 ~~~ 156 (390)
...
T Consensus 249 ~~~ 251 (416)
T 4e2x_A 249 DVQ 251 (416)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 269
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=89.58 E-value=0.69 Score=43.10 Aligned_cols=125 Identities=14% Similarity=0.185 Sum_probs=79.3
Q ss_pred ceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccEEEeCC
Q 016377 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 13 ~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
.+|+|+-||.|..+..+.+..-.. .+.++|+ +..++.-+.+.. . ..+.+|+.+- +++ .+|+++...
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~-~~D~v~~~~ 241 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSA-RGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE----VPS-NGDIYLLSR 241 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTC-EEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC----CCS-SCSEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHCCCC-EEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC----CCC-CCCEEEEch
Confidence 699999999999999998763212 4789999 877777666642 2 3456777651 333 499999654
Q ss_pred CCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccCh-------------------HHHHHHHHHHH
Q 016377 86 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS-------------------DTHAKMIEILA 146 (390)
Q Consensus 86 PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~-------------------~~~~~~~~~l~ 146 (390)
....|+ ++....++.++.+.++. .-.+++.|.+..-... ....++.+.|+
T Consensus 242 vl~~~~--------~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~ 310 (334)
T 2ip2_A 242 IIGDLD--------EAASLRLLGNCREAMAG---DGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLG 310 (334)
T ss_dssp CGGGCC--------HHHHHHHHHHHHHHSCT---TCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHH
T ss_pred hccCCC--------HHHHHHHHHHHHHhcCC---CCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHH
Confidence 433222 11223556666665543 4578888877421100 02456778888
Q ss_pred hCCceeEEE
Q 016377 147 NSDYLTQEF 155 (390)
Q Consensus 147 ~~GY~~~~~ 155 (390)
+.|+.+...
T Consensus 311 ~aGf~~~~~ 319 (334)
T 2ip2_A 311 RGGFAVERI 319 (334)
T ss_dssp HTTEEEEEE
T ss_pred HCCCceeEE
Confidence 999876543
No 270
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=89.28 E-value=0.61 Score=42.80 Aligned_cols=72 Identities=15% Similarity=0.074 Sum_probs=53.0
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC---CCeecCccccchh--hhcccCccEEEeCCC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH---RPYQGNIQNLTAA--ELDMYGAHAWLLSPP 86 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~---~~~~~di~~~~~~--~~~~~~~D~l~~g~P 86 (390)
.-.++|.-+|.||-|..+-+.+. .|+|+|.|+.|++.-+. ... .++.+|..++... ...-..+|.+++.+.
T Consensus 23 gg~~VD~T~G~GGHS~~il~~~g---~VigiD~Dp~Ai~~A~~-L~~~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~DLG 98 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILERGG---RVIGLDQDPEAVARAKG-LHLPGLTVVQGNFRHLKRHLAALGVERVDGILADLG 98 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHH-TCCTTEEEEESCGGGHHHHHHHTTCSCEEEEEEECS
T ss_pred CCEEEEeCCCCcHHHHHHHHCCC---EEEEEeCCHHHHHHHHh-hccCCEEEEECCcchHHHHHHHcCCCCcCEEEeCCc
Confidence 34799999999999999999853 59999999999988777 643 3467777776431 111124899997655
Q ss_pred C
Q 016377 87 C 87 (390)
Q Consensus 87 C 87 (390)
.
T Consensus 99 v 99 (285)
T 1wg8_A 99 V 99 (285)
T ss_dssp C
T ss_pred c
Confidence 4
No 271
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=89.11 E-value=0.17 Score=45.18 Aligned_cols=72 Identities=14% Similarity=0.101 Sum_probs=47.6
Q ss_pred CceEEeeecCchhHHHHHHhc----CCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccch-hhhcccCccEEEeC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKA----DVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTA-AELDMYGAHAWLLS 84 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~a----G~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~-~~~~~~~~D~l~~g 84 (390)
.-+|||+-||.|+.+.-+.+. +- ...|+++|+++..++.-+...+. .++++|+.+... ..+.+..+|+++..
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~-~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d 159 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGI-DCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFID 159 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTC-CCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEE
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCC-CCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEEC
Confidence 358999999999999998875 21 12699999998876544422222 357889887521 11222248988854
No 272
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=89.10 E-value=0.25 Score=50.72 Aligned_cols=69 Identities=13% Similarity=0.088 Sum_probs=48.3
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCC--c-cEEEEEcccHHHHHHHHHh----cCC--CCeecCccccchhhhcccCccE
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVS--A-QVVEAFDINDKANDVYELN----FGH--RPYQGNIQNLTAAELDMYGAHA 80 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~--~-~~v~a~e~~~~a~~~~~~n----~~~--~~~~~di~~~~~~~~~~~~~D~ 80 (390)
.....|+|+=||.|-++.-.-+||-+ . ..|+|+|.++.|..+.+.- +.+ +++.+|++++. +++ ++||
T Consensus 356 ~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~---LPE-KVDI 431 (637)
T 4gqb_A 356 TNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWV---APE-KADI 431 (637)
T ss_dssp TCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCC---CSS-CEEE
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceecc---CCc-ccCE
Confidence 34467999999999886555554321 1 1389999999887665432 233 46899999994 454 5999
Q ss_pred EE
Q 016377 81 WL 82 (390)
Q Consensus 81 l~ 82 (390)
|+
T Consensus 432 IV 433 (637)
T 4gqb_A 432 IV 433 (637)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 273
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=88.79 E-value=0.062 Score=49.15 Aligned_cols=65 Identities=15% Similarity=0.119 Sum_probs=42.9
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC------C-CCe--ecCccccchhhhcccCccEEE
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG------H-RPY--QGNIQNLTAAELDMYGAHAWL 82 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~------~-~~~--~~di~~~~~~~~~~~~~D~l~ 82 (390)
.-+||||.||.|+++.-+.+. . .|.|+|+++-+....+...+ + ..+ ++|+.++. ...+|+++
T Consensus 75 g~~VLDlGcGtG~~s~~la~~--~--~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-----~~~fD~V~ 145 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASR--P--HVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLP-----VERTDVIM 145 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTS--T--TEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC-----CCCCSEEE
T ss_pred CCEEEEeCcCCCHHHHHHHHc--C--cEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCC-----CCCCcEEE
Confidence 468999999999999999887 2 59999998732111001111 1 224 67887764 22599998
Q ss_pred eCC
Q 016377 83 LSP 85 (390)
Q Consensus 83 ~g~ 85 (390)
...
T Consensus 146 sd~ 148 (265)
T 2oxt_A 146 CDV 148 (265)
T ss_dssp ECC
T ss_pred EeC
Confidence 753
No 274
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=88.25 E-value=0.86 Score=40.98 Aligned_cols=66 Identities=15% Similarity=0.075 Sum_probs=48.2
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-----CCeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-----RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-----~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
..-+|+||=||.|-+++.+. +-. .+.|+|+|+.+++..+.+... ....+|..... ++. .+|++...
T Consensus 105 ~p~~VLDlGCG~gpLal~~~--~~~--~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~---~~~-~~DvvLll 175 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER--GIA--SVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAP---PAE-AGDLALIF 175 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT--TCS--EEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSC---CCC-BCSEEEEE
T ss_pred CCCeEEEecCCccHHHHHhc--cCC--eEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCC---CCC-CcchHHHH
Confidence 45699999999999999988 433 799999999999999999632 22344554433 333 48887643
No 275
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=87.84 E-value=1.2 Score=44.78 Aligned_cols=77 Identities=18% Similarity=0.144 Sum_probs=49.8
Q ss_pred CCceEEeeecCchhHHHHHHhc----CCC--------ccEEEEEcccHHHHHHHHHhc---CC---CCeecCccccchhh
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA----DVS--------AQVVEAFDINDKANDVYELNF---GH---RPYQGNIQNLTAAE 72 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a----G~~--------~~~v~a~e~~~~a~~~~~~n~---~~---~~~~~di~~~~~~~ 72 (390)
..-+|+|-+||.||+-+.+.+. +-. -..++++|+++.+...-+.|. +. .+..+|.-.....+
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~ 296 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLRE 296 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGGG
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchhh
Confidence 3448999999999998776431 100 125899999999988877773 21 34455543322211
Q ss_pred -hcccCccEEEeCCCC
Q 016377 73 -LDMYGAHAWLLSPPC 87 (390)
Q Consensus 73 -~~~~~~D~l~~g~PC 87 (390)
.....+|++++.||=
T Consensus 297 ~~~~~~fD~Il~NPPf 312 (530)
T 3ufb_A 297 MGDKDRVDVILTNPPF 312 (530)
T ss_dssp CCGGGCBSEEEECCCS
T ss_pred hcccccceEEEecCCC
Confidence 112259999999994
No 276
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=87.73 E-value=2.8 Score=39.13 Aligned_cols=128 Identities=9% Similarity=0.090 Sum_probs=79.9
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-------CCeecCccccchhhhcccCccEEEeC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-------RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-------~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
.-+|+|+-||.|.++..+.+..-.. .+.++|+ +..++.-+.+... ..+.+|+.+.... +++ .+|+++..
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~-~~D~v~~~ 255 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQL-TGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNF-EGG-AADVVMLN 255 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTC-EEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGG-TTC-CEEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCC-eEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCccc-CCC-CccEEEEe
Confidence 5799999999999999998864322 4778899 6666555555321 2456787765321 232 49999975
Q ss_pred CCCchhhhccCCCCCCCh-hhhhHHHHHHhcccccCCCcEEEEeccccccCh---------------------HHHHHHH
Q 016377 85 PPCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVVGFETS---------------------DTHAKMI 142 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~-r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~---------------------~~~~~~~ 142 (390)
.-...+ .|+ ...++.++.+.++- .-.+++.|.+..-... ...+++.
T Consensus 256 ~vlh~~---------~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~ 323 (352)
T 3mcz_A 256 DCLHYF---------DAREAREVIGHAAGLVKP---GGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIA 323 (352)
T ss_dssp SCGGGS---------CHHHHHHHHHHHHHTEEE---EEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHH
T ss_pred cccccC---------CHHHHHHHHHHHHHHcCC---CCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHH
Confidence 443222 222 34556666665543 3578888876322110 0245677
Q ss_pred HHHHhCCceeEEE
Q 016377 143 EILANSDYLTQEF 155 (390)
Q Consensus 143 ~~l~~~GY~~~~~ 155 (390)
+.|++.|+.+...
T Consensus 324 ~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 324 GVVRDAGLAVGER 336 (352)
T ss_dssp HHHHHTTCEEEEE
T ss_pred HHHHHCCCceeee
Confidence 8889999988764
No 277
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=87.51 E-value=3.6 Score=37.23 Aligned_cols=106 Identities=11% Similarity=0.047 Sum_probs=67.0
Q ss_pred CceEEeeecCc---hhHHHHHHhc--CCCccEEEEEcccHHHHHHHHHhcCC----CCeecCccccch--------hhhc
Q 016377 12 AWRVLEFYSGI---GGMRYSLMKA--DVSAQVVEAFDINDKANDVYELNFGH----RPYQGNIQNLTA--------AELD 74 (390)
Q Consensus 12 ~~~~~dlF~G~---Gg~~~g~~~a--G~~~~~v~a~e~~~~a~~~~~~n~~~----~~~~~di~~~~~--------~~~~ 74 (390)
.-+||||-||. |.++.-+.+. |. .|.++|+++..++.-+.+... ..+.+|+.+... +.+.
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~---~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDA---RVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTC---EEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCC---EEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCC
Confidence 35899999999 9887766653 43 588999999998888887742 347789877531 1122
Q ss_pred ccCccEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEecccc
Q 016377 75 MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 131 (390)
Q Consensus 75 ~~~~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~ 131 (390)
-..+|+++...-.+-++ +++...++.++.+.++- .=.+++.+....
T Consensus 155 ~~~~d~v~~~~vlh~~~--------d~~~~~~l~~~~~~L~p---GG~l~i~~~~~~ 200 (274)
T 2qe6_A 155 FSRPAAIMLVGMLHYLS--------PDVVDRVVGAYRDALAP---GSYLFMTSLVDT 200 (274)
T ss_dssp TTSCCEEEETTTGGGSC--------TTTHHHHHHHHHHHSCT---TCEEEEEEEBCS
T ss_pred CCCCEEEEEechhhhCC--------cHHHHHHHHHHHHhCCC---CcEEEEEEecCc
Confidence 11478888665433332 12344566667665543 334555665544
No 278
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=87.42 E-value=0.51 Score=44.25 Aligned_cols=46 Identities=9% Similarity=0.097 Sum_probs=40.3
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH 58 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~ 58 (390)
...=.|||.|||.|....+..+.|.+ ..++|+++.+++.-+.+...
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~gr~---~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERESRK---WISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHTTCE---EEEEESCHHHHHHHHGGGSC
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCC---EEEEeCCHHHHHHHHHHHHh
Confidence 34457999999999999999999975 77899999999999998864
No 279
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=87.39 E-value=0.12 Score=47.43 Aligned_cols=66 Identities=12% Similarity=0.066 Sum_probs=43.0
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC------C-CCe--ecCccccchhhhcccCccEE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG------H-RPY--QGNIQNLTAAELDMYGAHAW 81 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~------~-~~~--~~di~~~~~~~~~~~~~D~l 81 (390)
..-+||||.||.|+++.-+.+.| .|.|+|+++-+....+...+ + ..+ ++|+.++. ...+|++
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~~----~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-----~~~fD~V 152 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQP----NVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKME-----PFQADTV 152 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTST----TEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC-----CCCCSEE
T ss_pred CCCEEEEeccCCCHHHHHHHHcC----CEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCC-----CCCcCEE
Confidence 34689999999999999998872 58999998731111001111 1 234 66777754 2259999
Q ss_pred EeCC
Q 016377 82 LLSP 85 (390)
Q Consensus 82 ~~g~ 85 (390)
+...
T Consensus 153 vsd~ 156 (276)
T 2wa2_A 153 LCDI 156 (276)
T ss_dssp EECC
T ss_pred EECC
Confidence 8753
No 280
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=87.31 E-value=0.61 Score=43.20 Aligned_cols=44 Identities=16% Similarity=0.132 Sum_probs=36.0
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG 57 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~ 57 (390)
..+|||+-||.|+...-+...|.. .|.++|+++.+++.-+...+
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~--~v~GiD~S~~~l~~A~~~~~ 92 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIA--LLVATDPDADAIARGNERYN 92 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHH
T ss_pred CCeEEEEecCCcHhHHHHHhcCCC--eEEEEECCHHHHHHHHHHHH
Confidence 578999999999877767667754 79999999999888777654
No 281
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=87.23 E-value=2.9 Score=39.86 Aligned_cols=138 Identities=12% Similarity=-0.011 Sum_probs=79.4
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhhcccCccEEEeCCCCc
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSPPCQ 88 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~~~~~~D~l~~g~PCq 88 (390)
....+++||-|+.||++.-+.+.|. .|+|+|.-+-+- .....|. ..+++|..++.+.. ..+|+++.---|
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~---~V~aVD~~~l~~--~l~~~~~V~~~~~d~~~~~~~~---~~~D~vvsDm~~- 280 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNM---WVYSVDNGPMAQ--SLMDTGQVTWLREDGFKFRPTR---SNISWMVCDMVE- 280 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC---EEEEECSSCCCH--HHHTTTCEEEECSCTTTCCCCS---SCEEEEEECCSS-
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCC---EEEEEEhhhcCh--hhccCCCeEEEeCccccccCCC---CCcCEEEEcCCC-
Confidence 3567999999999999999999885 489999653221 1123344 45678888776542 259998843221
Q ss_pred hhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChH------HHHHHHHHHHhCCceeEEEEeCCCCc
Q 016377 89 PYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD------THAKMIEILANSDYLTQEFILSPLQF 162 (390)
Q Consensus 89 ~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~------~~~~~~~~l~~~GY~~~~~~l~a~~~ 162 (390)
.-.....-..+++... ..+-++ =|++=-+... ....+.+.|...|+....++. +
T Consensus 281 -------------~p~~~~~l~~~wl~~~--~~~~aI-~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~~~~l~ak---h- 340 (375)
T 4auk_A 281 -------------KPAKVAALMAQWLVNG--WCRETI-FNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQAR---Q- 340 (375)
T ss_dssp -------------CHHHHHHHHHHHHHTT--SCSEEE-EEEECCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEE---C-
T ss_pred -------------ChHHhHHHHHHHHhcc--ccceEE-EEEEecccchHHHHHHHHHHHHHHHHhcCcchhheeh---h-
Confidence 1122333444555554 333332 2444323321 345667788888876544432 2
Q ss_pred CCCccCcEEEEEEEe
Q 016377 163 GVPYSRPRYFCLAKR 177 (390)
Q Consensus 163 G~pq~R~R~~~i~~~ 177 (390)
+-+.|.=+-+..-|
T Consensus 341 -L~hdReEiTV~~rk 354 (375)
T 4auk_A 341 -LYHDREEVTVHVRR 354 (375)
T ss_dssp -CTTCSSEEEEEEEE
T ss_pred -hccCCcEEEEEEEe
Confidence 22356655554433
No 282
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=86.31 E-value=0.33 Score=50.22 Aligned_cols=101 Identities=9% Similarity=-0.011 Sum_probs=61.9
Q ss_pred CCceEEeeecCchhHHHHHHh----cC------C--CccEEEEEcccHHHHHHHHHh----cCC--CCeecCccccchh-
Q 016377 11 EAWRVLEFYSGIGGMRYSLMK----AD------V--SAQVVEAFDINDKANDVYELN----FGH--RPYQGNIQNLTAA- 71 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~----aG------~--~~~~v~a~e~~~~a~~~~~~n----~~~--~~~~~di~~~~~~- 71 (390)
....|+|+=||.|-++.-.-. || . .-..|+|+|.++.|..+.+.. +.+ +++.+|++++..-
T Consensus 409 ~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 409 KTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp SEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhccccc
Confidence 346799999999999863222 34 0 123799999999988776643 344 4578999999531
Q ss_pred --hhcccCccEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEE
Q 016377 72 --ELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF 125 (390)
Q Consensus 72 --~~~~~~~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~ 125 (390)
+.++ .+|+|+.-.- |- +- -+.|..+.+.-++.. .+|.=++
T Consensus 489 ~~~~~e-kVDIIVSElm-------Gs---fl--~nEL~pe~Ld~v~r~-Lkp~Gi~ 530 (745)
T 3ua3_A 489 KDRGFE-QPDIIVSELL-------GS---FG--DNELSPECLDGVTGF-LKPTTIS 530 (745)
T ss_dssp HHTTCC-CCSEEEECCC-------BT---TB--GGGSHHHHHHTTGGG-SCTTCEE
T ss_pred ccCCCC-cccEEEEecc-------cc---cc--chhccHHHHHHHHHh-CCCCcEE
Confidence 1122 5999985432 21 10 134566666655554 2554433
No 283
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=86.23 E-value=0.37 Score=43.90 Aligned_cols=131 Identities=15% Similarity=0.095 Sum_probs=74.8
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCC--CeecCccccchhhhcccCccEEEeCCCCch
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGHR--PYQGNIQNLTAAELDMYGAHAWLLSPPCQP 89 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~--~~~~di~~~~~~~~~~~~~D~l~~g~PCq~ 89 (390)
.-+|+||=||.|=+++.+....- -..++|+|+|+.+++.-+.|.... ...-.+.++....++. ..|++...---+
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p-~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~-~~DvaL~lkti~- 209 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPA-ETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDE-PADVTLLLKTLP- 209 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCT-TCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCS-CCSEEEETTCHH-
T ss_pred CceeeeeccCccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCC-CcchHHHHHHHH-
Confidence 55999999999999999987632 338999999999999999997431 1222233333333333 588887441100
Q ss_pred hhhccCCCCCCCh-hhhhHHHHHHhcccccCCCcEEEEeccccccChH------HHH-HHHHHHHhCCceeEEEEeCC
Q 016377 90 YTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVVGFETSD------THA-KMIEILANSDYLTQEFILSP 159 (390)
Q Consensus 90 fS~~g~~~~~~d~-r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~------~~~-~~~~~l~~~GY~~~~~~l~a 159 (390)
-+++. ++.+| ++++.+ +|..+++-==..-+.++ .++ .+-+.+.+.|-.++-..+..
T Consensus 210 --------~Le~q~kg~g~----~ll~aL--~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~~~~n 273 (281)
T 3lcv_B 210 --------CLETQQRGSGW----EVIDIV--NSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRLEIGN 273 (281)
T ss_dssp --------HHHHHSTTHHH----HHHHHS--SCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred --------HhhhhhhHHHH----HHHHHh--CCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeeeeecC
Confidence 12233 34444 455566 55554442211111211 343 34444566787776666544
No 284
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=85.62 E-value=0.6 Score=41.18 Aligned_cols=76 Identities=14% Similarity=0.016 Sum_probs=48.2
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHH-HH---HHHhc-----CC-CCeecCccccchhhhcccCccE
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKAN-DV---YELNF-----GH-RPYQGNIQNLTAAELDMYGAHA 80 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~-~~---~~~n~-----~~-~~~~~di~~~~~~~~~~~~~D~ 80 (390)
..-+|||+-||.|.++..+..... ...|.++|+++.+. +. -+.+. ++ ..+++|+.++... +.+ .+|.
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~-~~d-~v~~ 100 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQ-NTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFE-LKN-IADS 100 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCT-TEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGG-GTT-CEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhh-ccC-eEEE
Confidence 456899999999999999885432 12589999994443 22 13222 22 3467888888432 222 3777
Q ss_pred EEeCCCCch
Q 016377 81 WLLSPPCQP 89 (390)
Q Consensus 81 l~~g~PCq~ 89 (390)
+...+|...
T Consensus 101 i~~~~~~~~ 109 (225)
T 3p2e_A 101 ISILFPWGT 109 (225)
T ss_dssp EEEESCCHH
T ss_pred EEEeCCCcH
Confidence 877777443
No 285
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=84.03 E-value=5.1 Score=37.06 Aligned_cols=126 Identities=19% Similarity=0.213 Sum_probs=81.4
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccEEEeC
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
..+++|+-||.|..+..+.+..-.. .+.++|+ +..++.-+.+.. + ....+|+.+ .++. .+|+++..
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~p~-~~D~v~~~ 242 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDL-SGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD----PLPA-GAGGYVLS 242 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS----CCCC-SCSEEEEE
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCC-eEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC----CCCC-CCcEEEEe
Confidence 4689999999999999998753222 4778899 888887777643 2 235677752 2333 49999876
Q ss_pred CCCchhhhccCCCCCCCh-hhhhHHHHHHhcccccCCCcEEEEeccccccCh----------------HHHHHHHHHHHh
Q 016377 85 PPCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVVGFETS----------------DTHAKMIEILAN 147 (390)
Q Consensus 85 ~PCq~fS~~g~~~~~~d~-r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~----------------~~~~~~~~~l~~ 147 (390)
.-...| .|+ ...++.++.+.++- .-.+++.|.+..-... ...+++.+.|++
T Consensus 243 ~vlh~~---------~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~ 310 (332)
T 3i53_A 243 AVLHDW---------DDLSAVAILRRCAEAAGS---GGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQ 310 (332)
T ss_dssp SCGGGS---------CHHHHHHHHHHHHHHHTT---TCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHH
T ss_pred hhhccC---------CHHHHHHHHHHHHHhcCC---CCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHH
Confidence 443322 233 34566667676553 4678888887532100 124577888999
Q ss_pred CCceeEEEE
Q 016377 148 SDYLTQEFI 156 (390)
Q Consensus 148 ~GY~~~~~~ 156 (390)
.|+.+....
T Consensus 311 aGf~~~~~~ 319 (332)
T 3i53_A 311 AGLAVRAAH 319 (332)
T ss_dssp TTEEEEEEE
T ss_pred CCCEEEEEE
Confidence 998775543
No 286
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=83.65 E-value=0.81 Score=42.85 Aligned_cols=46 Identities=13% Similarity=0.083 Sum_probs=38.2
Q ss_pred CCCceEEeeecCchhHHHHHHhcCCCccEEEEEcccH---HHHHHHHHhcCC
Q 016377 10 GEAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDIND---KANDVYELNFGH 58 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~---~a~~~~~~n~~~ 58 (390)
...=.|||.|||.|....+....|.+ ..++|+++ ..++.-..+...
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~~r~---~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQEGRN---SICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTCE---EEEEESSTHHHHHHHHHHHHC--
T ss_pred CCCCEEEecCCCCCHHHHHHHHcCCc---EEEEECCccHHHHHHHHHHHHHH
Confidence 34457999999999999999999975 77899999 888888888754
No 287
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=81.30 E-value=2.3 Score=40.38 Aligned_cols=57 Identities=12% Similarity=0.195 Sum_probs=46.1
Q ss_pred CCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCC---CCeecCccccc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH---RPYQGNIQNLT 69 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~---~~~~~di~~~~ 69 (390)
..-+|+|+..|.|+++..|.+. +.+ -|.|+|+|+.-+..++..+.. .++.+|+-+++
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~--~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPR--QYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDWS 118 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCS--EEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCHH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCC--EEEEEecCHHHHHHHHHhccCCCEEEEECCccchh
Confidence 4578999999999999999985 323 699999999999988876522 46789997765
No 288
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=80.95 E-value=2.7 Score=39.44 Aligned_cols=126 Identities=11% Similarity=0.090 Sum_probs=74.6
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhhcccCccEEEeCCCCchh
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSPPCQPY 90 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~f 90 (390)
.-+|+|+=||.|.++..+.+..-.. .+.++|+ +..++.-+. +++ ..+.+|+.+ .++. +|+++.......+
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~----~~p~--~D~v~~~~~lh~~ 259 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFPKL-KCIVFDR-PQVVENLSG-SNNLTYVGGDMFT----SIPN--ADAVLLKYILHNW 259 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHTTCCC-BTTEEEEECCTTT----CCCC--CSEEEEESCGGGS
T ss_pred CceEEEeCCCccHHHHHHHHHCCCC-eEEEeeC-HHHHhhccc-CCCcEEEeccccC----CCCC--ccEEEeehhhccC
Confidence 4689999999999999998763212 4889999 777654333 232 335667754 2343 8999976543332
Q ss_pred hhccCCCCCCCh-hhhhHHHHHHhcccccCCCcEEEEeccccccC-h---------------------HHHHHHHHHHHh
Q 016377 91 TRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVVGFET-S---------------------DTHAKMIEILAN 147 (390)
Q Consensus 91 S~~g~~~~~~d~-r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~-~---------------------~~~~~~~~~l~~ 147 (390)
.|+ ...++.++.+.++--...-.+++.|.+..-.. . ...+++.+.|++
T Consensus 260 ---------~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~ 330 (352)
T 1fp2_A 260 ---------TDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIE 330 (352)
T ss_dssp ---------CHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHH
T ss_pred ---------CHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHH
Confidence 222 22455555554432000136788887643111 0 023567788889
Q ss_pred CCceeEEE
Q 016377 148 SDYLTQEF 155 (390)
Q Consensus 148 ~GY~~~~~ 155 (390)
.|+.+...
T Consensus 331 aGf~~~~~ 338 (352)
T 1fp2_A 331 AGFQHYKI 338 (352)
T ss_dssp TTCCEEEE
T ss_pred CCCCeeEE
Confidence 99875443
No 289
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=80.33 E-value=2 Score=38.42 Aligned_cols=75 Identities=13% Similarity=0.032 Sum_probs=48.5
Q ss_pred CCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHH------HHHHHHHhcCC-------CCeecC-ccccchhhhcc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDK------ANDVYELNFGH-------RPYQGN-IQNLTAAELDM 75 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~------a~~~~~~n~~~-------~~~~~d-i~~~~~~~~~~ 75 (390)
...+|||+-||.|.++.-+... |-. ..+.++|+++. .++.-+.++.. .++.+| +..... .+..
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~-~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~ 120 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSS-GHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLG-PIAD 120 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTT-CEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCG-GGTT
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCC-CEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccC-CCCC
Confidence 4568999999999999998876 431 26999999876 55555555422 234566 322211 2333
Q ss_pred cCccEEEeCCCC
Q 016377 76 YGAHAWLLSPPC 87 (390)
Q Consensus 76 ~~~D~l~~g~PC 87 (390)
..+|+++.....
T Consensus 121 ~~fD~v~~~~~l 132 (275)
T 3bkx_A 121 QHFDRVVLAHSL 132 (275)
T ss_dssp CCCSEEEEESCG
T ss_pred CCEEEEEEccch
Confidence 369999976543
No 290
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=79.39 E-value=9.1 Score=35.66 Aligned_cols=125 Identities=13% Similarity=0.173 Sum_probs=76.6
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcC-----C--CCeecCccccchhhhcccCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFG-----H--RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~-----~--~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
..-+|+|+-||.|..+..+.+..-+. .+.++|+. .... +.+.. + ..+.+|+.+ .++ .+|+++.
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~-~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~~----~~p--~~D~v~~ 253 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGL-QGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFLR----EVP--HADVHVL 253 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTE-EEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTTT----CCC--CCSEEEE
T ss_pred CCceEEEECCccCHHHHHHHHHCCCC-EEEEecCH-HHhh--cccccccCCCCCeEEEecCCCC----CCC--CCcEEEE
Confidence 35689999999999999998865432 36788884 3333 33322 1 235667752 233 4999987
Q ss_pred CCCCchhhhccCCCCCCCh-hhhhHHHHHHhcccccCCCcEEEEeccccccCh-------------------HHHHHHHH
Q 016377 84 SPPCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVVGFETS-------------------DTHAKMIE 143 (390)
Q Consensus 84 g~PCq~fS~~g~~~~~~d~-r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~-------------------~~~~~~~~ 143 (390)
..-...+ .|+ ...++.++.+.++- .-++++.|.+..-... ...+++.+
T Consensus 254 ~~vlh~~---------~d~~~~~~L~~~~~~Lkp---gG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ 321 (348)
T 3lst_A 254 KRILHNW---------GDEDSVRILTNCRRVMPA---HGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEP 321 (348)
T ss_dssp ESCGGGS---------CHHHHHHHHHHHHHTCCT---TCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHH
T ss_pred ehhccCC---------CHHHHHHHHHHHHHhcCC---CCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHH
Confidence 6543322 232 24556666665543 4678888876432111 02456778
Q ss_pred HHHhCCceeEEEEe
Q 016377 144 ILANSDYLTQEFIL 157 (390)
Q Consensus 144 ~l~~~GY~~~~~~l 157 (390)
.|++.|+.+....-
T Consensus 322 ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 322 LFTAAGLRLDRVVG 335 (348)
T ss_dssp HHHHTTEEEEEEEE
T ss_pred HHHHCCCceEEEEE
Confidence 88999987755443
No 291
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=79.01 E-value=7.9 Score=31.80 Aligned_cols=117 Identities=15% Similarity=0.021 Sum_probs=69.9
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC--CCeecCccccchhhhcccCccEEEeCCCCc
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH--RPYQGNIQNLTAAELDMYGAHAWLLSPPCQ 88 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~--~~~~~di~~~~~~~~~~~~~D~l~~g~PCq 88 (390)
..-+|+|+-||. + ++|+++..++..+.+.+. ..+++|+.++....+....+|+++.+.-..
T Consensus 12 ~g~~vL~~~~g~----------------v-~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~ 74 (176)
T 2ld4_A 12 AGQFVAVVWDKS----------------S-PVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPG 74 (176)
T ss_dssp TTSEEEEEECTT----------------S-CHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTT
T ss_pred CCCEEEEecCCc----------------e-eeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhh
Confidence 346788887764 1 278889888888888754 346788887753222333699999764322
Q ss_pred hhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccC----hHHHHHHHHHHHhCCceeEEEEe
Q 016377 89 PYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET----SDTHAKMIEILANSDYLTQEFIL 157 (390)
Q Consensus 89 ~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~----~~~~~~~~~~l~~~GY~~~~~~l 157 (390)
.++ .| ...++.++.++++- .=.+++.+....... ......+.+.|++.|+ +....+
T Consensus 75 ~~~--------~~-~~~~l~~~~r~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~~~~~ 134 (176)
T 2ld4_A 75 STT--------LH-SAEILAEIARILRP---GGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VEVKEL 134 (176)
T ss_dssp CCC--------CC-CHHHHHHHHHHEEE---EEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EEEEEE
T ss_pred hcc--------cC-HHHHHHHHHHHCCC---CEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cEeecC
Confidence 110 12 24567777776654 234444333221100 0135788999999999 764443
No 292
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=78.17 E-value=30 Score=32.97 Aligned_cols=156 Identities=12% Similarity=0.054 Sum_probs=89.7
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC--------------CCeecCccccchhhhc-cc
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH--------------RPYQGNIQNLTAAELD-MY 76 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~--------------~~~~~di~~~~~~~~~-~~ 76 (390)
.-+||-+=.|.||.-.-+.+-.. +.|..||+|+.-++.-+.-+|. .++.+|..++-.+... ..
T Consensus 206 pkrVLIIGgGdG~~~revlkh~~--~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVKLKP--KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHTTCC--SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCeEEEECCCcHHHHHHHHhcCC--ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 34788888888777666665553 4899999999999998887764 1244555554321111 12
Q ss_pred CccEEEeCCCCchhhhccCCCCCCChhhhhH-HHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEEE
Q 016377 77 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSF-LKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEF 155 (390)
Q Consensus 77 ~~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~-~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~ 155 (390)
.+|+|+.-.+=.+.|... ...-..|| .++++.++.. .+|.=+++-+.........+..+.+.|.+..-.+...
T Consensus 284 ~yDvIIvDl~D~~~s~~p-----~g~a~~Lft~eFy~~~~~~-L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~vF~~v~~~ 357 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSP-----EEDSTWEFLRLILDLSMKV-LKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEFS 357 (381)
T ss_dssp CEEEEEEECCSSCCCCC---------CHHHHHHHHHHHHHHT-EEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEEE
T ss_pred ceeEEEECCCCCcccCcc-----cCcchHHHHHHHHHHHHHh-cCCCCEEEEecCCCcchhHHHHHHHHHHHhCCcceEe
Confidence 599999875522222111 11113344 4556555443 2677666644322222345777888888875554432
Q ss_pred --EeCCCCcCCCccCcEEEEEEEeCC
Q 016377 156 --ILSPLQFGVPYSRPRYFCLAKRKP 179 (390)
Q Consensus 156 --~l~a~~~G~pq~R~R~~~i~~~~~ 179 (390)
...-.-|+ -...|++|+++.
T Consensus 358 ~~~~~VPSy~----~~W~F~~aSK~~ 379 (381)
T 3c6k_A 358 KEIVCVPSYL----ELWVFYTVWKKA 379 (381)
T ss_dssp EEEECCGGGS----SCEEEEEEEECC
T ss_pred eEEEEecCCC----CceeeeEEECCC
Confidence 22223342 257899998863
No 293
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=74.41 E-value=6.7 Score=36.72 Aligned_cols=126 Identities=13% Similarity=0.112 Sum_probs=73.7
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhhcccCccEEEeCCCCchh
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSPPCQPY 90 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~f 90 (390)
.-+|+|+-||.|.++..+.+..-+. .+.++|+ +..++.-+. +++ ..+.+|+.+ .++. +|+++.......+
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~----~~~~--~D~v~~~~vlh~~ 264 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHL-KCTVFDQ-PQVVGNLTG-NENLNFVGGDMFK----SIPS--ADAVLLKWVLHDW 264 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTS-EEEEEEC-HHHHSSCCC-CSSEEEEECCTTT----CCCC--CSEEEEESCGGGS
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCC-eEEEecc-HHHHhhccc-CCCcEEEeCccCC----CCCC--ceEEEEcccccCC
Confidence 3589999999999999998875333 4678898 555543222 232 234567665 2343 8999987654433
Q ss_pred hhccCCCCCCCh-hhhhHHHHHHhcccccCCCcEEEEeccccccCh--------H---------------HHHHHHHHHH
Q 016377 91 TRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVVGFETS--------D---------------THAKMIEILA 146 (390)
Q Consensus 91 S~~g~~~~~~d~-r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~--------~---------------~~~~~~~~l~ 146 (390)
+ |+ ...++.++.+.++.-...-+++++|.+..-... . ..+++.+.|+
T Consensus 265 ~---------d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~ 335 (358)
T 1zg3_A 265 N---------DEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIY 335 (358)
T ss_dssp C---------HHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHH
T ss_pred C---------HHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHH
Confidence 2 22 234555555544420001358888877431110 0 2346777888
Q ss_pred hCCceeEEE
Q 016377 147 NSDYLTQEF 155 (390)
Q Consensus 147 ~~GY~~~~~ 155 (390)
+.|+.+...
T Consensus 336 ~aGf~~~~~ 344 (358)
T 1zg3_A 336 DAGFSSYKI 344 (358)
T ss_dssp HTTCCEEEE
T ss_pred HcCCCeeEE
Confidence 899875443
No 294
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=70.95 E-value=4.9 Score=38.00 Aligned_cols=100 Identities=10% Similarity=0.146 Sum_probs=64.1
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhhcccCccEEEeCCCCch
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSPPCQP 89 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~ 89 (390)
..-+|+|+-||.|.++..+.+..-.. .+.++|+ +..++.-+.+ +. ..+.+|+.+ .++. .|+++.......
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~----~~p~--~D~v~~~~vlh~ 273 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSI-NAINFDL-PHVIQDAPAF-SGVEHLGGDMFD----GVPK--GDAIFIKWICHD 273 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHTTCCCC-TTEEEEECCTTT----CCCC--CSEEEEESCGGG
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCC-EEEEEeh-HHHHHhhhhc-CCCEEEecCCCC----CCCC--CCEEEEechhhc
Confidence 35689999999999999998854322 3678898 7666543322 22 345678765 2444 399887765444
Q ss_pred hhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccc
Q 016377 90 YTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130 (390)
Q Consensus 90 fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~ 130 (390)
++ +++...++.++.+.++- .-++++.|.+.
T Consensus 274 ~~--------~~~~~~~l~~~~~~L~p---gG~l~i~e~~~ 303 (368)
T 3reo_A 274 WS--------DEHCLKLLKNCYAALPD---HGKVIVAEYIL 303 (368)
T ss_dssp BC--------HHHHHHHHHHHHHHSCT---TCEEEEEECCC
T ss_pred CC--------HHHHHHHHHHHHHHcCC---CCEEEEEEecc
Confidence 43 11223456666665553 46788988874
No 295
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=70.81 E-value=6.7 Score=35.50 Aligned_cols=106 Identities=8% Similarity=0.062 Sum_probs=58.0
Q ss_pred CCCceEEeeecCchhHHHHHH----hcCCCccE-EEEEcccHHHHHHHHHhcCC----CCe-----ecCccccchh---h
Q 016377 10 GEAWRVLEFYSGIGGMRYSLM----KADVSAQV-VEAFDINDKANDVYELNFGH----RPY-----QGNIQNLTAA---E 72 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~----~aG~~~~~-v~a~e~~~~a~~~~~~n~~~----~~~-----~~di~~~~~~---~ 72 (390)
....+|||+-||.|.++.-+. ..+-...+ +.++|.++..++..+.+... ..+ .+|+.++... .
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 355799999999998765332 22222222 48999999998888777532 111 2233322110 0
Q ss_pred hcccCccEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEec
Q 016377 73 LDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 128 (390)
Q Consensus 73 ~~~~~~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~EN 128 (390)
+....+|++++..-... ..|. ...+.++.++++- .-.+++++.
T Consensus 131 ~~~~~fD~V~~~~~l~~---------~~d~-~~~l~~~~r~Lkp---gG~l~i~~~ 173 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYY---------VKDI-PATLKFFHSLLGT---NAKMLIIVV 173 (292)
T ss_dssp TCCCCEEEEEEESCGGG---------CSCH-HHHHHHHHHTEEE---EEEEEEEEE
T ss_pred cCCCceeEEEEeeeeee---------cCCH-HHHHHHHHHHcCC---CcEEEEEEe
Confidence 12335999997643222 2232 3346666665543 234555543
No 296
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=69.97 E-value=2.7 Score=40.64 Aligned_cols=69 Identities=22% Similarity=0.205 Sum_probs=45.4
Q ss_pred CCceEEeeecC------chhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchh-hhc--ccCccE
Q 016377 11 EAWRVLEFYSG------IGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAA-ELD--MYGAHA 80 (390)
Q Consensus 11 ~~~~~~dlF~G------~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~-~~~--~~~~D~ 80 (390)
...+|||+-|| .||.++-+...=+.--.|.++|+++... .+.+. .++++|+.++... .+. ...+|+
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~----~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDl 291 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH----VDELRIRTIQGDQNDAEFLDRIARRYGPFDI 291 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG----GCBTTEEEEECCTTCHHHHHHHHHHHCCEEE
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh----hcCCCcEEEEecccccchhhhhhcccCCccE
Confidence 46799999999 6888887765411112689999998863 22333 4578999886432 111 235999
Q ss_pred EEe
Q 016377 81 WLL 83 (390)
Q Consensus 81 l~~ 83 (390)
++.
T Consensus 292 Vis 294 (419)
T 3sso_A 292 VID 294 (419)
T ss_dssp EEE
T ss_pred EEE
Confidence 984
No 297
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=67.04 E-value=75 Score=29.52 Aligned_cols=69 Identities=6% Similarity=0.017 Sum_probs=46.5
Q ss_pred CceEEeeecCchhH---HHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCC
Q 016377 12 AWRVLEFYSGIGGM---RYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~---~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
++++.=+=+|..+. .-.+...|++ ++..+|.++..++.+...++......|+.++-. +.++|+++...|
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~--lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~----~~~vD~V~I~tp 97 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGAR--LAGFHEKDDALAAEFSAVYADARRIATAEEILE----DENIGLIVSAAV 97 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCE--EEEEECSCHHHHHHHHHHSSSCCEESCHHHHHT----CTTCCEEEECCC
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcE--EEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhc----CCCCCEEEEeCC
Confidence 56776665554442 2234456755 999999999999999999986555567766532 224888776655
No 298
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=66.80 E-value=2.8 Score=38.76 Aligned_cols=68 Identities=13% Similarity=0.108 Sum_probs=42.5
Q ss_pred CceEEeeecCchhHHHHHHhcCCCccEEEEEcc----cHHHHHHHH-Hhc--CC-CCeec-CccccchhhhcccCccEEE
Q 016377 12 AWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDI----NDKANDVYE-LNF--GH-RPYQG-NIQNLTAAELDMYGAHAWL 82 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~----~~~a~~~~~-~n~--~~-~~~~~-di~~~~~~~~~~~~~D~l~ 82 (390)
..+||||.||.|+++.-+.+.| .|.++|+ .+...+... ... +. ..+++ |+.++.. ..+|+++
T Consensus 83 g~~VLDlGcG~G~~s~~la~~~----~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~-----~~fD~V~ 153 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGLK----NVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPP-----ERCDTLL 153 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTST----TEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCC-----CCCSEEE
T ss_pred CCEEEEEcCCCCHHHHHHHhcC----CEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCc-----CCCCEEE
Confidence 4689999999999999998873 4788888 331111000 011 11 23455 6666532 2499999
Q ss_pred eCCCCc
Q 016377 83 LSPPCQ 88 (390)
Q Consensus 83 ~g~PCq 88 (390)
...+|.
T Consensus 154 sd~~~~ 159 (305)
T 2p41_A 154 CDIGES 159 (305)
T ss_dssp ECCCCC
T ss_pred ECCccc
Confidence 877663
No 299
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=66.75 E-value=4 Score=37.39 Aligned_cols=38 Identities=21% Similarity=0.249 Sum_probs=31.6
Q ss_pred ceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHh
Q 016377 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELN 55 (390)
Q Consensus 13 ~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n 55 (390)
-+++|.|+|+|+..+.+.. + .++.+|+|++-+..|+.-
T Consensus 37 ~~yvEpF~GggaV~~~~~~---~--~~i~ND~n~~Lin~y~~i 74 (284)
T 2dpm_A 37 NRYFEPFVGGGALFFDLAP---K--DAVINDFNAELINCYQQI 74 (284)
T ss_dssp SCEEETTCTTCHHHHHHCC---S--EEEEEESCHHHHHHHHHH
T ss_pred CEEEeecCCccHHHHhhhc---c--ceeeeecchHHHHHHHHH
Confidence 4799999999998887632 3 799999999999999654
No 300
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=64.90 E-value=7.7 Score=36.57 Aligned_cols=100 Identities=10% Similarity=0.106 Sum_probs=63.2
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhhcccCccEEEeCCCCch
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSPPCQP 89 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~ 89 (390)
..-+|+|+-||.|.++..+.+.--+. .+.++|+ +..++.-+.+ +. ..+.+|+.+ .++. .|+++.+.-...
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~-~~v~~~~~D~~~----~~p~--~D~v~~~~vlh~ 271 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTI-KGVNFDL-PHVISEAPQF-PGVTHVGGDMFK----EVPS--GDTILMKWILHD 271 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHTTCCCC-TTEEEEECCTTT----CCCC--CSEEEEESCGGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCC-eEEEecC-HHHHHhhhhc-CCeEEEeCCcCC----CCCC--CCEEEehHHhcc
Confidence 45789999999999999998753322 3678898 6655433221 22 345677765 2444 389887655443
Q ss_pred hhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccc
Q 016377 90 YTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV 130 (390)
Q Consensus 90 fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~ 130 (390)
++ +++...++.++.+.++- .-+++++|.+.
T Consensus 272 ~~--------d~~~~~~L~~~~~~L~p---gG~l~i~e~~~ 301 (364)
T 3p9c_A 272 WS--------DQHCATLLKNCYDALPA---HGKVVLVQCIL 301 (364)
T ss_dssp SC--------HHHHHHHHHHHHHHSCT---TCEEEEEECCB
T ss_pred CC--------HHHHHHHHHHHHHHcCC---CCEEEEEEecc
Confidence 32 12233556666665553 46889999874
No 301
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=64.84 E-value=5.6 Score=36.17 Aligned_cols=45 Identities=20% Similarity=0.187 Sum_probs=33.8
Q ss_pred CCceEEeeecCchh----HHHHHHhc-CC---CccEEEEEcccHHHHHHHHHhc
Q 016377 11 EAWRVLEFYSGIGG----MRYSLMKA-DV---SAQVVEAFDINDKANDVYELNF 56 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg----~~~g~~~a-G~---~~~~v~a~e~~~~a~~~~~~n~ 56 (390)
..++|+|+-||.|- +.+-+.+. |- .+ .|.|+|+++.+++.-+.+.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~-~I~atDis~~~L~~Ar~~~ 157 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRW-KVFASDIDTEVLEKARSGI 157 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSE-EEEEEESCHHHHHHHHHTE
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCe-EEEEEECCHHHHHHHHhcC
Confidence 46899999999997 44445543 31 12 5999999999999988874
No 302
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=64.31 E-value=11 Score=35.26 Aligned_cols=79 Identities=14% Similarity=0.008 Sum_probs=53.5
Q ss_pred CCceEEeeecCchhHHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCC--CCeecCccccchhhhcc----cCccEEEe
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGH--RPYQGNIQNLTAAELDM----YGAHAWLL 83 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~--~~~~~di~~~~~~~~~~----~~~D~l~~ 83 (390)
..-.++|.-+|.||-|..+-+. |-+. .|+|+|.|+.|++.-+.-+.. .++.++..++... +.. ..+|.+++
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~G-rVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~~~-L~~~g~~~~vDgILf 134 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEG-RLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEY-VAERDLIGKIDGILL 134 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTC-EEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHHHH-HHHTTCTTCEEEEEE
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHHHH-HHhcCCCCcccEEEE
Confidence 3457999999999999999875 4322 589999999999876422222 2456666665421 111 13899988
Q ss_pred CCCCchhh
Q 016377 84 SPPCQPYT 91 (390)
Q Consensus 84 g~PCq~fS 91 (390)
-..|..+-
T Consensus 135 DLGVSS~Q 142 (347)
T 3tka_A 135 DLGVSSPQ 142 (347)
T ss_dssp ECSCCHHH
T ss_pred CCccCHHH
Confidence 87776443
No 303
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=63.71 E-value=5.2 Score=37.79 Aligned_cols=99 Identities=12% Similarity=0.124 Sum_probs=62.8
Q ss_pred CCceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhhcccCccEEEeCCCCch
Q 016377 11 EAWRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHAWLLSPPCQP 89 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~~~~~~D~l~~g~PCq~ 89 (390)
..-+|+|+-||.|.++..+.+.+-+. .+.++|+ +..++.-+. ++. ..+.+|+.+ .++. +|+++.......
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~-~~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~----~~~~--~D~v~~~~~lh~ 279 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLI-KGINFDL-PQVIENAPP-LSGIEHVGGDMFA----SVPQ--GDAMILKAVCHN 279 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHTTCCC-CTTEEEEECCTTT----CCCC--EEEEEEESSGGG
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCC-eEEEeCh-HHHHHhhhh-cCCCEEEeCCccc----CCCC--CCEEEEeccccc
Confidence 34689999999999999999876443 4678898 766654332 232 345677765 2443 899987644322
Q ss_pred hhhccCCCCCCCh-hhhhHHHHHHhcccccCCCcEEEEeccc
Q 016377 90 YTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVV 130 (390)
Q Consensus 90 fS~~g~~~~~~d~-r~~l~~~~~~~i~~~~~~P~~~~~ENV~ 130 (390)
+ .|+ ...++.++.+.++- .-.+++.|.+.
T Consensus 280 ~---------~d~~~~~~l~~~~~~L~p---gG~l~i~e~~~ 309 (372)
T 1fp1_D 280 W---------SDEKCIEFLSNCHKALSP---NGKVIIVEFIL 309 (372)
T ss_dssp S---------CHHHHHHHHHHHHHHEEE---EEEEEEEEEEE
T ss_pred C---------CHHHHHHHHHHHHHhcCC---CCEEEEEEecc
Confidence 2 222 23556666666554 35677777663
No 304
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=62.77 E-value=19 Score=28.51 Aligned_cols=63 Identities=24% Similarity=0.313 Sum_probs=41.4
Q ss_pred eecCchhHHHH----HHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccch---hhhcccCccEEEeCCC
Q 016377 18 FYSGIGGMRYS----LMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA---AELDMYGAHAWLLSPP 86 (390)
Q Consensus 18 lF~G~Gg~~~g----~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~---~~~~~~~~D~l~~g~P 86 (390)
+.+|+|-+... |...|++ |.++|.|+..++.++. .....+.+|..+... ..+. +.|+++...|
T Consensus 11 iIiG~G~~G~~la~~L~~~g~~---v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~~ 80 (140)
T 3fwz_A 11 LLVGYGRVGSLLGEKLLASDIP---LVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAHLE--CAKWLILTIP 80 (140)
T ss_dssp EEECCSHHHHHHHHHHHHTTCC---EEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTTGG--GCSEEEECCS
T ss_pred EEECcCHHHHHHHHHHHHCCCC---EEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcCcc--cCCEEEEECC
Confidence 45677744333 3356875 8889999999988775 344567788876532 1233 4899887765
No 305
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=59.68 E-value=18 Score=30.97 Aligned_cols=64 Identities=11% Similarity=0.160 Sum_probs=43.4
Q ss_pred eecCchhHHHH----HHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccch---hhhcccCccEEEeCCC
Q 016377 18 FYSGIGGMRYS----LMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA---AELDMYGAHAWLLSPP 86 (390)
Q Consensus 18 lF~G~Gg~~~g----~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~---~~~~~~~~D~l~~g~P 86 (390)
+.+|+|-+... |.+.|.+ |..+|.|+..++.+.......++.+|..+... ..+. +.|+++...|
T Consensus 4 iIiG~G~~G~~la~~L~~~g~~---v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~~ 74 (218)
T 3l4b_C 4 IIIGGETTAYYLARSMLSRKYG---VVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVS--KNDVVVILTP 74 (218)
T ss_dssp EEECCHHHHHHHHHHHHHTTCC---EEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCC--TTCEEEECCS
T ss_pred EEECCCHHHHHHHHHHHhCCCe---EEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcc--cCCEEEEecC
Confidence 45677744333 3456875 77889999998887766666678888887532 1233 4899987765
No 306
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=59.20 E-value=5.2 Score=36.45 Aligned_cols=39 Identities=21% Similarity=0.169 Sum_probs=31.5
Q ss_pred ceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhc
Q 016377 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNF 56 (390)
Q Consensus 13 ~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~ 56 (390)
-+.+|.|+|+|+..+.+. .+ .++.+|+|++-+..|+.--
T Consensus 29 ~~yvEpF~Ggg~V~~~~~---~~--~~i~ND~n~~lin~y~~i~ 67 (278)
T 2g1p_A 29 ECLVEPFVGAGSVFLNTD---FS--RYILADINSDLISLYNIVK 67 (278)
T ss_dssp SEEEETTCTTCHHHHTCC---CS--EEEEEESCHHHHHHHHHHH
T ss_pred CeEEeeccCccHHHHhhc---cc--ceEEEeccHHHHHHHHHHH
Confidence 489999999998876543 23 7899999999998887664
No 307
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=58.88 E-value=4.8 Score=36.73 Aligned_cols=33 Identities=27% Similarity=0.328 Sum_probs=25.2
Q ss_pred CceEEeeecCchhHHHH-HHhcCCCccEEEEEcccH
Q 016377 12 AWRVLEFYSGIGGMRYS-LMKADVSAQVVEAFDIND 46 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g-~~~aG~~~~~v~a~e~~~ 46 (390)
..+||||.||.||++.- ....|.. .|.++|+-.
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~~gv~--sV~GvdvG~ 124 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASLKNVK--KVMAFTLGV 124 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEE--EEEEECCCC
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCCC--eeeeEEecc
Confidence 34899999999999995 4456643 677888764
No 308
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=56.46 E-value=5 Score=36.54 Aligned_cols=31 Identities=32% Similarity=0.509 Sum_probs=22.7
Q ss_pred ceEEeeecCchhHHHH-HHhcCCCccEEEEEccc
Q 016377 13 WRVLEFYSGIGGMRYS-LMKADVSAQVVEAFDIN 45 (390)
Q Consensus 13 ~~~~dlF~G~Gg~~~g-~~~aG~~~~~v~a~e~~ 45 (390)
-+||||.||.||++.- ++..|.. .+.++++-
T Consensus 76 ~~VLDLGaAPGGWSQvAa~~~~~~--~v~g~dVG 107 (277)
T 3evf_A 76 GRVIDLGCGRGGWCYYAAAQKEVS--GVKGFTLG 107 (277)
T ss_dssp EEEEEETCTTCHHHHHHHTSTTEE--EEEEECCC
T ss_pred CEEEEecCCCCHHHHHHHHhcCCC--cceeEEEe
Confidence 4799999999999995 4444643 56666654
No 309
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=55.72 E-value=25 Score=27.51 Aligned_cols=65 Identities=20% Similarity=0.197 Sum_probs=39.8
Q ss_pred eecCchhHHH----HHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccch-hhhcccCccEEEeCCC
Q 016377 18 FYSGIGGMRY----SLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA-AELDMYGAHAWLLSPP 86 (390)
Q Consensus 18 lF~G~Gg~~~----g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~-~~~~~~~~D~l~~g~P 86 (390)
+.+|+|.+.. .|...|++ |.++|.++..++..... ....+.+|+.+... ....-.++|+++...|
T Consensus 10 ~I~G~G~iG~~la~~L~~~g~~---V~~id~~~~~~~~~~~~-~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 10 IVIGSEAAGVGLVRELTAAGKK---VLAVDKSKEKIELLEDE-GFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp EEECCSHHHHHHHHHHHHTTCC---EEEEESCHHHHHHHHHT-TCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred EEECCCHHHHHHHHHHHHCCCe---EEEEECCHHHHHHHHHC-CCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 3456664333 34456876 67889999988877653 33456788876432 1111115899987766
No 310
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=55.21 E-value=24 Score=27.24 Aligned_cols=63 Identities=16% Similarity=0.298 Sum_probs=39.0
Q ss_pred ecCchhHHHH----HHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccch---hhhcccCccEEEeCCC
Q 016377 19 YSGIGGMRYS----LMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA---AELDMYGAHAWLLSPP 86 (390)
Q Consensus 19 F~G~Gg~~~g----~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~---~~~~~~~~D~l~~g~P 86 (390)
..|+|.+... |.+.|.+ |..+|.++..++.+...++...+.+|..+... ..+. +.|+++...|
T Consensus 9 IiG~G~iG~~~a~~L~~~g~~---v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~--~~d~vi~~~~ 78 (140)
T 1lss_A 9 IAGIGRVGYTLAKSLSEKGHD---IVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIE--DADMYIAVTG 78 (140)
T ss_dssp EECCSHHHHHHHHHHHHTTCE---EEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTT--TCSEEEECCS
T ss_pred EECCCHHHHHHHHHHHhCCCe---EEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcc--cCCEEEEeeC
Confidence 3477744433 3456854 67789998888877766544456677654321 1133 4899998765
No 311
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=54.89 E-value=42 Score=31.20 Aligned_cols=122 Identities=14% Similarity=0.199 Sum_probs=75.8
Q ss_pred ceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC------CCeecCccccchhhhcccCccEEEeCCC
Q 016377 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH------RPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 13 ~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~------~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
-+++|+=||.|.+...+.+.--+.+ +...|. +..++.-+.+... ..+.+|+.+- .++ +.|+++..--
T Consensus 181 ~~v~DvGgG~G~~~~~l~~~~p~~~-~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~---~~~--~~D~~~~~~v 253 (353)
T 4a6d_A 181 PLMCDLGGGAGALAKECMSLYPGCK-ITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKD---PLP--EADLYILARV 253 (353)
T ss_dssp SEEEEETCTTSHHHHHHHHHCSSCE-EEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTS---CCC--CCSEEEEESS
T ss_pred CeEEeeCCCCCHHHHHHHHhCCCce-eEeccC-HHHHHHHHHhhhhcccCceeeecCccccC---CCC--CceEEEeeee
Confidence 3799999999999999998754433 345565 6677777777653 2356676542 234 3788886644
Q ss_pred CchhhhccCCCCCCChh-hhhHHHHHHhcccccCCCcEEEEecccccc-Ch----H---------------HHHHHHHHH
Q 016377 87 CQPYTRQGLQKQSSDAR-AFSFLKILELIPHTVKPPHMLFVENVVGFE-TS----D---------------THAKMIEIL 145 (390)
Q Consensus 87 Cq~fS~~g~~~~~~d~r-~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~-~~----~---------------~~~~~~~~l 145 (390)
.-+| .|+. -.++.++.+.++- .-+++++|.|..=- .. . +.+++.+.|
T Consensus 254 lh~~---------~d~~~~~iL~~~~~al~p---gg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll 321 (353)
T 4a6d_A 254 LHDW---------ADGKCSHLLERIYHTCKP---GGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLL 321 (353)
T ss_dssp GGGS---------CHHHHHHHHHHHHHHCCT---TCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHH
T ss_pred cccC---------CHHHHHHHHHHHHhhCCC---CCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHH
Confidence 3333 2332 3455666665443 45899999874211 10 0 235677888
Q ss_pred HhCCceeE
Q 016377 146 ANSDYLTQ 153 (390)
Q Consensus 146 ~~~GY~~~ 153 (390)
++.|+...
T Consensus 322 ~~AGf~~v 329 (353)
T 4a6d_A 322 SSAGFRDF 329 (353)
T ss_dssp HHHTCEEE
T ss_pred HHCCCceE
Confidence 88998654
No 312
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=54.31 E-value=67 Score=29.36 Aligned_cols=69 Identities=10% Similarity=0.117 Sum_probs=43.1
Q ss_pred CceEEeeecCchhH---HHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCC
Q 016377 12 AWRVLEFYSGIGGM---RYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~---~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
++++.=+=+|..|. ...+...|++ ++..+|.++..++.+...++......|..++ +.+.++|+++...|
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~--lvav~d~~~~~~~~~a~~~~~~~~~~~~~~l----l~~~~~D~V~i~tp 75 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAE--LAGVFESDSDNRAKFTSLFPSVPFAASAEQL----ITDASIDLIACAVI 75 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCE--EEEEECSCTTSCHHHHHHSTTCCBCSCHHHH----HTCTTCCEEEECSC
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcE--EEEEeCCCHHHHHHHHHhcCCCcccCCHHHH----hhCCCCCEEEEeCC
Confidence 46665554443332 1234446755 8999999999888888888754444565554 22224888776655
No 313
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=51.21 E-value=58 Score=31.20 Aligned_cols=63 Identities=14% Similarity=0.275 Sum_probs=43.6
Q ss_pred eecCchhHHHH----HHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchh---hhcccCccEEEeCCC
Q 016377 18 FYSGIGGMRYS----LMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAA---ELDMYGAHAWLLSPP 86 (390)
Q Consensus 18 lF~G~Gg~~~g----~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~---~~~~~~~D~l~~g~P 86 (390)
+.+|.|-+... |...|++ |.++|.|+..++..+ .....++.+|.++...- .+. +.|+++...+
T Consensus 8 iIiG~Gr~G~~va~~L~~~g~~---vvvId~d~~~v~~~~-~~g~~vi~GDat~~~~L~~agi~--~A~~viv~~~ 77 (413)
T 3l9w_A 8 IIAGFGRFGQITGRLLLSSGVK---MVVLDHDPDHIETLR-KFGMKVFYGDATRMDLLESAGAA--KAEVLINAID 77 (413)
T ss_dssp EEECCSHHHHHHHHHHHHTTCC---EEEEECCHHHHHHHH-HTTCCCEESCTTCHHHHHHTTTT--TCSEEEECCS
T ss_pred EEECCCHHHHHHHHHHHHCCCC---EEEEECCHHHHHHHH-hCCCeEEEcCCCCHHHHHhcCCC--ccCEEEECCC
Confidence 45677743333 4456875 888999999998876 45667889999886431 233 4898887766
No 314
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=50.96 E-value=18 Score=33.73 Aligned_cols=77 Identities=9% Similarity=-0.041 Sum_probs=47.1
Q ss_pred CCCCceEEeeecCchhHHHH----HHhc-C-----CCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCc
Q 016377 9 DGEAWRVLEFYSGIGGMRYS----LMKA-D-----VSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGA 78 (390)
Q Consensus 9 ~~~~~~~~dlF~G~Gg~~~g----~~~a-G-----~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~ 78 (390)
.+.+++|.=+ |+|.+... +... + ...+++..+|.++..++.+...|+......|..++-. +.++
T Consensus 3 ~M~klrvgiI--G~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~----~~~i 76 (390)
T 4h3v_A 3 AMTNLGIGLI--GYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLE----RDDV 76 (390)
T ss_dssp -CCEEEEEEE--CHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTT----CTTC
T ss_pred CCCcCcEEEE--cCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhc----CCCC
Confidence 3445777654 66655432 2221 1 1135899999999999999999986655667766532 2258
Q ss_pred cEEEeC-CCCchhh
Q 016377 79 HAWLLS-PPCQPYT 91 (390)
Q Consensus 79 D~l~~g-~PCq~fS 91 (390)
|+++.+ ||-.-+.
T Consensus 77 DaV~I~tP~~~H~~ 90 (390)
T 4h3v_A 77 QLVDVCTPGDSHAE 90 (390)
T ss_dssp SEEEECSCGGGHHH
T ss_pred CEEEEeCChHHHHH
Confidence 876554 4444333
No 315
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=46.73 E-value=1.3e+02 Score=26.93 Aligned_cols=65 Identities=18% Similarity=0.253 Sum_probs=41.4
Q ss_pred CCceEEeeecCchhHHHH-----HHh-cCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRYS-----LMK-ADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g-----~~~-aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
+++++. +-|+|.+... +.. .| ++++..+|.++..++.+...++... ..|..++ .. ++|+++..
T Consensus 5 ~~~~ig--iIG~G~~g~~~~~~~l~~~~~--~~l~av~d~~~~~~~~~a~~~~~~~-~~~~~~l-----l~-~~D~V~i~ 73 (308)
T 3uuw_A 5 KNIKMG--MIGLGSIAQKAYLPILTKSER--FEFVGAFTPNKVKREKICSDYRIMP-FDSIESL-----AK-KCDCIFLH 73 (308)
T ss_dssp CCCEEE--EECCSHHHHHHTHHHHTSCSS--SEEEEEECSCHHHHHHHHHHHTCCB-CSCHHHH-----HT-TCSEEEEC
T ss_pred ccCcEE--EEecCHHHHHHHHHHHHhCCC--eEEEEEECCCHHHHHHHHHHcCCCC-cCCHHHH-----Hh-cCCEEEEe
Confidence 346665 4466655443 333 35 4488899999999998888886543 3444443 22 48887776
Q ss_pred CC
Q 016377 85 PP 86 (390)
Q Consensus 85 ~P 86 (390)
.|
T Consensus 74 tp 75 (308)
T 3uuw_A 74 SS 75 (308)
T ss_dssp CC
T ss_pred CC
Confidence 66
No 316
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=45.49 E-value=7.1 Score=35.12 Aligned_cols=40 Identities=18% Similarity=0.239 Sum_probs=32.7
Q ss_pred ceEEeeecCchhHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC
Q 016377 13 WRVLEFYSGIGGMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH 58 (390)
Q Consensus 13 ~~~~dlF~G~Gg~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~ 58 (390)
-+.+|.|+|+|+..+.+. .+ ++.+|+|++-+..|+.--.+
T Consensus 26 ~~yvEpF~GggaV~~~~~-----~~-~viNDin~~li~~~~~i~~~ 65 (259)
T 1yf3_A 26 NRFVDLFCGGLSVSLNVN-----GP-VLANDIQEPIIEMYKRLINV 65 (259)
T ss_dssp SEEEETTCTTCTTGGGSC-----SS-EEEECSCHHHHHHHHHHTTC
T ss_pred CeEEEecCCccHHHHhcc-----cc-EEEecCChHHHHHHHHHHHh
Confidence 489999999999877542 35 88999999999999877654
No 317
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=45.46 E-value=2e+02 Score=27.32 Aligned_cols=69 Identities=12% Similarity=0.202 Sum_probs=42.1
Q ss_pred CCCceEEeeecCchhHHH-HH----Hhc-CCCccEEEEEcccHHHHHHHHHhcCCCC----eecCccccchhhhcccCcc
Q 016377 10 GEAWRVLEFYSGIGGMRY-SL----MKA-DVSAQVVEAFDINDKANDVYELNFGHRP----YQGNIQNLTAAELDMYGAH 79 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~-g~----~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~~~----~~~di~~~~~~~~~~~~~D 79 (390)
+.++++. +-|+|.+.. .+ ... + ++++..+|.++...+.+...++... ...|..++- .+.++|
T Consensus 81 ~~~irig--iIG~G~~g~~~~~~~l~~~~~--~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll----~~~~vD 152 (433)
T 1h6d_A 81 DRRFGYA--IVGLGKYALNQILPGFAGCQH--SRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIA----KDPKID 152 (433)
T ss_dssp CCCEEEE--EECCSHHHHHTHHHHTTTCSS--EEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGG----GCTTCC
T ss_pred CCceEEE--EECCcHHHHHHHHHHHhhCCC--cEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHh----cCCCCC
Confidence 4456654 567776553 33 222 3 4588999999998888888776431 334555542 222488
Q ss_pred EEEeCCC
Q 016377 80 AWLLSPP 86 (390)
Q Consensus 80 ~l~~g~P 86 (390)
+++...|
T Consensus 153 ~V~iatp 159 (433)
T 1h6d_A 153 AVYIILP 159 (433)
T ss_dssp EEEECSC
T ss_pred EEEEcCC
Confidence 8776655
No 318
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=44.75 E-value=2e+02 Score=26.90 Aligned_cols=77 Identities=18% Similarity=0.238 Sum_probs=46.4
Q ss_pred CCCCceEEeeecC----chhHH-HHHHhcCCCccEEE-EEcccHHHHHHHHHhcCCC--CeecCccccchhhh-cccCcc
Q 016377 9 DGEAWRVLEFYSG----IGGMR-YSLMKADVSAQVVE-AFDINDKANDVYELNFGHR--PYQGNIQNLTAAEL-DMYGAH 79 (390)
Q Consensus 9 ~~~~~~~~dlF~G----~Gg~~-~g~~~aG~~~~~v~-a~e~~~~a~~~~~~n~~~~--~~~~di~~~~~~~~-~~~~~D 79 (390)
.+.++++.=+=+| +|... .++...+- ++++. .+|.++..++.+...++-. ....|+.++-.++- ...++|
T Consensus 9 ~m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~-~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD 87 (398)
T 3dty_A 9 IPQPIRWAMVGGGSQSQIGYIHRCAALRDNT-FVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQ 87 (398)
T ss_dssp SCSCEEEEEEECCTTCSSHHHHHHHHHGGGS-EEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCS
T ss_pred ccCcceEEEEcCCccchhHHHHHHHHhhCCC-eEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCC
Confidence 3456888777677 34333 23444431 44776 5799999999998888653 45567777643311 112488
Q ss_pred EEEeCCC
Q 016377 80 AWLLSPP 86 (390)
Q Consensus 80 ~l~~g~P 86 (390)
+++...|
T Consensus 88 ~V~i~tp 94 (398)
T 3dty_A 88 AVSIATP 94 (398)
T ss_dssp EEEEESC
T ss_pred EEEECCC
Confidence 7665544
No 319
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=44.67 E-value=12 Score=33.41 Aligned_cols=35 Identities=23% Similarity=0.333 Sum_probs=29.0
Q ss_pred CCceEEeeecCchhHHH-HHHhcCCCccEEEEEcccHH
Q 016377 11 EAWRVLEFYSGIGGMRY-SLMKADVSAQVVEAFDINDK 47 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~-g~~~aG~~~~~v~a~e~~~~ 47 (390)
...+|+||=|+.||+|. .....|.. .|+|+|+-..
T Consensus 78 ~g~~VvDLGaapGGWSq~~a~~~g~~--~V~avdvG~~ 113 (267)
T 3p8z_A 78 PEGRVIDLGCGRGGWSYYCAGLKKVT--EVRGYTKGGP 113 (267)
T ss_dssp CCEEEEEESCTTSHHHHHHHTSTTEE--EEEEECCCST
T ss_pred CCCEEEEcCCCCCcHHHHHHHhcCCC--EEEEEecCCC
Confidence 34499999999999999 77778855 8999998743
No 320
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=43.10 E-value=1.9e+02 Score=26.27 Aligned_cols=72 Identities=11% Similarity=-0.000 Sum_probs=44.5
Q ss_pred CCceEEeeecC-c-hh-HHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCC
Q 016377 11 EAWRVLEFYSG-I-GG-MRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 11 ~~~~~~dlF~G-~-Gg-~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
.++++.=+=+| . |. .-.++...+-.++++..+|.++..++.+...++......|..++- .+.++|+++-..|
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll----~~~~vD~V~i~tp 91 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELL----ESGLVDAVDLTLP 91 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHH----HSSCCSEEEECCC
T ss_pred CceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHh----cCCCCCEEEEeCC
Confidence 35677655555 2 22 223455542225589999999999999888887544456666542 2224888776655
No 321
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=42.85 E-value=51 Score=27.01 Aligned_cols=63 Identities=16% Similarity=0.181 Sum_probs=39.6
Q ss_pred eecCchhHHHH----HHhc-CCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccch-hh---hcccCccEEEeCCC
Q 016377 18 FYSGIGGMRYS----LMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA-AE---LDMYGAHAWLLSPP 86 (390)
Q Consensus 18 lF~G~Gg~~~g----~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~-~~---~~~~~~D~l~~g~P 86 (390)
+++|+|.+... |... |++ |.++|.++..++..+. ....++.+|..+... .. +. ++|+++...|
T Consensus 43 ~IiG~G~~G~~~a~~L~~~~g~~---V~vid~~~~~~~~~~~-~g~~~~~gd~~~~~~l~~~~~~~--~ad~vi~~~~ 114 (183)
T 3c85_A 43 LILGMGRIGTGAYDELRARYGKI---SLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERILDTG--HVKLVLLAMP 114 (183)
T ss_dssp EEECCSHHHHHHHHHHHHHHCSC---EEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTBCSCC--CCCEEEECCS
T ss_pred EEECCCHHHHHHHHHHHhccCCe---EEEEECCHHHHHHHHH-CCCCEEEcCCCCHHHHHhccCCC--CCCEEEEeCC
Confidence 34577754433 4456 875 7788999988887664 344556777765421 11 23 4899988765
No 322
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=42.09 E-value=32 Score=31.98 Aligned_cols=71 Identities=13% Similarity=0.106 Sum_probs=42.6
Q ss_pred CCCCCceEEeeecCchhHHH----HHHh--------cCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcc
Q 016377 8 NDGEAWRVLEFYSGIGGMRY----SLMK--------ADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDM 75 (390)
Q Consensus 8 ~~~~~~~~~dlF~G~Gg~~~----g~~~--------aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~ 75 (390)
+++++++|.=+ |+|.+.. ++.. .+ .+++..+|.++..++.+...|+......|..++- .+
T Consensus 21 ~~MkkirvgiI--G~G~ig~~H~~a~~~~~~~~~~~~~--~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell----~~ 92 (393)
T 4fb5_A 21 QSMKPLGIGLI--GTGYMGKCHALAWNAVKTVFGDVER--PRLVHLAEANAGLAEARAGEFGFEKATADWRALI----AD 92 (393)
T ss_dssp ---CCCEEEEE--CCSHHHHHHHHHHTTHHHHHCSSCC--CEEEEEECC--TTHHHHHHHHTCSEEESCHHHHH----HC
T ss_pred cCCCCccEEEE--cCCHHHHHHHHHHHhhhhhhccCCC--cEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHh----cC
Confidence 44567888765 4554432 1211 13 4599999999999999999998755566776653 22
Q ss_pred cCccEEEeCCC
Q 016377 76 YGAHAWLLSPP 86 (390)
Q Consensus 76 ~~~D~l~~g~P 86 (390)
.++|+++.+.|
T Consensus 93 ~~iDaV~IatP 103 (393)
T 4fb5_A 93 PEVDVVSVTTP 103 (393)
T ss_dssp TTCCEEEECSC
T ss_pred CCCcEEEECCC
Confidence 25887765544
No 323
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=40.48 E-value=1.9e+02 Score=27.49 Aligned_cols=69 Identities=14% Similarity=0.078 Sum_probs=38.6
Q ss_pred CCCceEEeeecCchhHHHHH----Hh-cCCCccEEEEEcccHHHHHHHHHh-----cCCCCeec----Cccccchhhhcc
Q 016377 10 GEAWRVLEFYSGIGGMRYSL----MK-ADVSAQVVEAFDINDKANDVYELN-----FGHRPYQG----NIQNLTAAELDM 75 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~----~~-aG~~~~~v~a~e~~~~a~~~~~~n-----~~~~~~~~----di~~~~~~~~~~ 75 (390)
++++++.=+ |+|.+.... .. .| ++++..+|.++..++.+... ++...... |..++- .+
T Consensus 18 ~~~~rvgiI--G~G~~g~~h~~~l~~~~~--~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll----~~ 89 (444)
T 2ixa_A 18 PKKVRIAFI--AVGLRGQTHVENMARRDD--VEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNML----KD 89 (444)
T ss_dssp -CCEEEEEE--CCSHHHHHHHHHHHTCTT--EEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHT----TC
T ss_pred CCCceEEEE--ecCHHHHHHHHHHHhCCC--cEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHh----cC
Confidence 345666544 666544332 22 25 44899999999888776653 23223333 444432 22
Q ss_pred cCccEEEeCCC
Q 016377 76 YGAHAWLLSPP 86 (390)
Q Consensus 76 ~~~D~l~~g~P 86 (390)
.++|+++...|
T Consensus 90 ~~vD~V~i~tp 100 (444)
T 2ixa_A 90 KNIDAVFVSSP 100 (444)
T ss_dssp TTCCEEEECCC
T ss_pred CCCCEEEEcCC
Confidence 25887776655
No 324
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=39.96 E-value=11 Score=34.77 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=28.5
Q ss_pred CceEEeeecCchhHHH-HHHhcCCCccEEEEEcccHH
Q 016377 12 AWRVLEFYSGIGGMRY-SLMKADVSAQVVEAFDINDK 47 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~-g~~~aG~~~~~v~a~e~~~~ 47 (390)
..+|+||=|+.||++. .+...|.. .|+|+|+-..
T Consensus 95 ~~~VlDLGaapGGwsq~~~~~~gv~--~V~avdvG~~ 129 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMATQKRVQ--EVRGYTKGGP 129 (321)
T ss_dssp CEEEEEETCTTCHHHHHHTTCTTEE--EEEEECCCST
T ss_pred CCEEEEeCCCCCcHHHHHHhhcCCC--EEEEEEcCCC
Confidence 3499999999999999 77778855 8999998743
No 325
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=39.83 E-value=18 Score=33.15 Aligned_cols=34 Identities=26% Similarity=0.388 Sum_probs=27.3
Q ss_pred CCceEEeeecCchhHHHHHHh-cCCCccEEEEEcccH
Q 016377 11 EAWRVLEFYSGIGGMRYSLMK-ADVSAQVVEAFDIND 46 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~g~~~-aG~~~~~v~a~e~~~ 46 (390)
...+||||.|+.||++.-+.+ .|.. -|.++|+..
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~gv~--sV~Gvdlg~ 115 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKEVM--SVKGYTLGI 115 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEE--EEEEECCCC
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcCCc--eeeeEEecc
Confidence 457899999999999999986 4643 677888853
No 326
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=39.29 E-value=2.2e+02 Score=25.75 Aligned_cols=69 Identities=12% Similarity=0.036 Sum_probs=42.8
Q ss_pred CceEEeeecCchhHHHHHH----hc-CCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCC
Q 016377 12 AWRVLEFYSGIGGMRYSLM----KA-DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~----~a-G~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
++++. +-|+|.+...+. .. +.+++++..+|.++..++.+...++......|..++-. +.++|+++...|
T Consensus 2 ~~rig--iiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~----~~~vD~V~i~tp 75 (334)
T 3ohs_X 2 ALRWG--IVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAK----DPNVEVAYVGTQ 75 (334)
T ss_dssp CEEEE--EECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHH----CTTCCEEEECCC
T ss_pred ccEEE--EECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhc----CCCCCEEEECCC
Confidence 34543 456665554433 22 22345899999999999999888876444566666532 224888766544
No 327
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=38.19 E-value=2.6e+02 Score=26.32 Aligned_cols=81 Identities=15% Similarity=0.163 Sum_probs=45.2
Q ss_pred cccCCCCCceEEeeecC----chhHH-HHHHhcCCCccEEE-EEcccHHHHHHHHHhcCCC--CeecCccccchhhh-cc
Q 016377 5 MCKNDGEAWRVLEFYSG----IGGMR-YSLMKADVSAQVVE-AFDINDKANDVYELNFGHR--PYQGNIQNLTAAEL-DM 75 (390)
Q Consensus 5 ~~~~~~~~~~~~dlF~G----~Gg~~-~g~~~aG~~~~~v~-a~e~~~~a~~~~~~n~~~~--~~~~di~~~~~~~~-~~ 75 (390)
|..+.+.++++.=+=+| +|... .++...+- ++++. .+|.++..++.+...++-. ....|+.++-.++- ..
T Consensus 30 ~~~~~m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~-~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~ 108 (417)
T 3v5n_A 30 STETRQKRIRLGMVGGGSGAFIGAVHRIAARLDDH-YELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLK 108 (417)
T ss_dssp -----CCCEEEEEESCC--CHHHHHHHHHHHHTSC-EEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCT
T ss_pred cccccCCcceEEEEcCCCchHHHHHHHHHHhhCCC-cEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccC
Confidence 33344566888766666 33232 23344442 44775 6799999999988888653 44567766643211 00
Q ss_pred cCccEEEeCCC
Q 016377 76 YGAHAWLLSPP 86 (390)
Q Consensus 76 ~~~D~l~~g~P 86 (390)
.++|+++...|
T Consensus 109 ~~vD~V~I~tp 119 (417)
T 3v5n_A 109 NGIEAVAIVTP 119 (417)
T ss_dssp TCCSEEEECSC
T ss_pred CCCcEEEECCC
Confidence 24887666555
No 328
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=37.84 E-value=1.2e+02 Score=27.66 Aligned_cols=67 Identities=10% Similarity=-0.044 Sum_probs=40.4
Q ss_pred CceEEeeecCchhHHH----HHHh-cCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCC
Q 016377 12 AWRVLEFYSGIGGMRY----SLMK-ADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~----g~~~-aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
++++. +-|+|.+.. ++.. .+ ++++..+|.++..++.+...++......|..++- .+.++|+++...|
T Consensus 5 ~~~ig--iiG~G~~g~~~~~~l~~~~~--~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll----~~~~~D~V~i~tp 76 (330)
T 3e9m_A 5 KIRYG--IMSTAQIVPRFVAGLRESAQ--AEVRGIASRRLENAQKMAKELAIPVAYGSYEELC----KDETIDIIYIPTY 76 (330)
T ss_dssp CEEEE--ECSCCTTHHHHHHHHHHSSS--EEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHH----HCTTCSEEEECCC
T ss_pred eEEEE--EECchHHHHHHHHHHHhCCC--cEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHh----cCCCCCEEEEcCC
Confidence 45554 445554333 3333 35 4488889999999998888887533445655542 2224887665544
No 329
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=37.21 E-value=2.4e+02 Score=25.57 Aligned_cols=149 Identities=12% Similarity=0.007 Sum_probs=89.2
Q ss_pred CceEEeeecCchhHHHHHHh-cCCCccEEEEEcccHHHHHHHHHhcCC-----------CCeecCccccchhhhcccCcc
Q 016377 12 AWRVLEFYSGIGGMRYSLMK-ADVSAQVVEAFDINDKANDVYELNFGH-----------RPYQGNIQNLTAAELDMYGAH 79 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~~-aG~~~~~v~a~e~~~~a~~~~~~n~~~-----------~~~~~di~~~~~~~~~~~~~D 79 (390)
.-+||-+=.|.||...-+.. .+.+ .|..||+|+.-++..+.-+|. .++.+|..++-...- ..+|
T Consensus 84 pk~VLIiGgGdG~~~revlk~~~v~--~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~--~~yD 159 (294)
T 3o4f_A 84 AKHVLIIGGGDGAMLREVTRHKNVE--SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTS--QTFD 159 (294)
T ss_dssp CCEEEEESCTTSHHHHHHHTCTTCC--EEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSS--CCEE
T ss_pred CCeEEEECCCchHHHHHHHHcCCcc--eEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhcc--ccCC
Confidence 45787777777766655544 4544 899999999988887776641 356788887754322 2599
Q ss_pred EEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcc-cccCCCcEEEEecccc-ccChHHHHHHHHHHHhCCceeEEEEe
Q 016377 80 AWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIP-HTVKPPHMLFVENVVG-FETSDTHAKMIEILANSDYLTQEFIL 157 (390)
Q Consensus 80 ~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~-~~~~~P~~~~~ENV~~-~~~~~~~~~~~~~l~~~GY~~~~~~l 157 (390)
+|+.-.+-.. |....+- + .++++.++ .+ +|.=+++=+... ++....+..+.+.|.+..-.+.....
T Consensus 160 vIi~D~~dp~----~~~~~L~---t---~eFy~~~~~~L--~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~~v~~~~~ 227 (294)
T 3o4f_A 160 VIISDCTDPI----GPGESLF---T---SAFYEGCKRCL--NPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQA 227 (294)
T ss_dssp EEEESCCCCC----CTTCCSS---C---CHHHHHHHHTE--EEEEEEEEEEEESSSCCHHHHHHHHHHHHHCSEEEEEEE
T ss_pred EEEEeCCCcC----CCchhhc---C---HHHHHHHHHHh--CCCCEEEEecCCcccChHHHHHHHHHHHhhCCceeeeee
Confidence 9998766321 2111111 1 12333333 34 677666655533 34455677777888777655655444
Q ss_pred CCCCcCCCccCcEEEEEEEeCC
Q 016377 158 SPLQFGVPYSRPRYFCLAKRKP 179 (390)
Q Consensus 158 ~a~~~G~pq~R~R~~~i~~~~~ 179 (390)
.-.-|- .-...|++|+++.
T Consensus 228 ~vPty~---~g~w~f~~as~~~ 246 (294)
T 3o4f_A 228 AIPTYY---GGIMTFAWATDND 246 (294)
T ss_dssp CCTTSS---SSCEEEEEEESCT
T ss_pred eeccCC---CcceeheeEECCC
Confidence 433341 1347888888764
No 330
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=35.95 E-value=27 Score=31.00 Aligned_cols=58 Identities=10% Similarity=0.137 Sum_probs=37.3
Q ss_pred hHHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccch-hhh----cc--cCccEEEeC
Q 016377 24 GMRYSLMKADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTA-AEL----DM--YGAHAWLLS 84 (390)
Q Consensus 24 g~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~-~~~----~~--~~~D~l~~g 84 (390)
.....|.+.|.+ |..+|.++...+......+. ..+.+|+++... +.+ .+ ..+|+|+-.
T Consensus 17 aia~~la~~Ga~---V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNN 82 (247)
T 3ged_A 17 QICLDFLEAGDK---VCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNN 82 (247)
T ss_dssp HHHHHHHHTTCE---EEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHCCCE---EEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 445556678975 66679998887777666655 346788887542 111 11 269999953
No 331
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=35.61 E-value=2.4e+02 Score=25.25 Aligned_cols=61 Identities=8% Similarity=0.191 Sum_probs=38.1
Q ss_pred ecCchhHHHHH----Hhc-CCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCC
Q 016377 19 YSGIGGMRYSL----MKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 19 F~G~Gg~~~g~----~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
+-|+|.+...+ ... + ++++..+|.++...+.+...++......|..++ + +.++|+++...|
T Consensus 6 iiG~G~~g~~~~~~l~~~~~--~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~----l-~~~~D~V~i~tp 71 (325)
T 2ho3_A 6 VIGTGAISHHFIEAAHTSGE--YQLVAIYSRKLETAATFASRYQNIQLFDQLEVF----F-KSSFDLVYIASP 71 (325)
T ss_dssp EECCSHHHHHHHHHHHHTTS--EEEEEEECSSHHHHHHHGGGSSSCEEESCHHHH----H-TSSCSEEEECSC
T ss_pred EEeCCHHHHHHHHHHHhCCC--eEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHH----h-CCCCCEEEEeCC
Confidence 45666544333 333 4 448889999999988888877643334555443 2 225888776655
No 332
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=35.13 E-value=32 Score=32.66 Aligned_cols=47 Identities=11% Similarity=0.125 Sum_probs=34.8
Q ss_pred ccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCC
Q 016377 36 AQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 36 ~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
.+++..+|.++..++.+...|+......|..++-. +.++|+++...|
T Consensus 59 ~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~----~~~vD~V~I~tp 105 (412)
T 4gqa_A 59 PHLYALADQDQAMAERHAAKLGAEKAYGDWRELVN----DPQVDVVDITSP 105 (412)
T ss_dssp EEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHH----CTTCCEEEECSC
T ss_pred eEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhc----CCCCCEEEECCC
Confidence 45899999999999999999987655677776532 235888765544
No 333
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=34.43 E-value=2.2e+02 Score=26.10 Aligned_cols=71 Identities=14% Similarity=0.138 Sum_probs=41.8
Q ss_pred CCCCCceEEeeecCchhHHH----HHH-h-cCCCccEEEEEcccHHHHHHHHHhcCC-CCeecCccccchhhhcccCccE
Q 016377 8 NDGEAWRVLEFYSGIGGMRY----SLM-K-ADVSAQVVEAFDINDKANDVYELNFGH-RPYQGNIQNLTAAELDMYGAHA 80 (390)
Q Consensus 8 ~~~~~~~~~dlF~G~Gg~~~----g~~-~-aG~~~~~v~a~e~~~~a~~~~~~n~~~-~~~~~di~~~~~~~~~~~~~D~ 80 (390)
++++++++.= -|+|.+.. ++. . .| ++++..+|.++..++.+...++- .....|..++- ...++|+
T Consensus 19 ~~m~~~rvgi--IG~G~~g~~~~~~l~~~~~~--~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll----~~~~~D~ 90 (357)
T 3ec7_A 19 FQGMTLKAGI--VGIGMIGSDHLRRLANTVSG--VEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLI----NDKDVEV 90 (357)
T ss_dssp ---CCEEEEE--ECCSHHHHHHHHHHHHTCTT--EEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHH----HCTTCCE
T ss_pred cCCCeeeEEE--ECCcHHHHHHHHHHHhhCCC--cEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHh----cCCCCCE
Confidence 3445667654 45554332 333 2 35 44888999999998888888873 33445655542 2224888
Q ss_pred EEeCCC
Q 016377 81 WLLSPP 86 (390)
Q Consensus 81 l~~g~P 86 (390)
++...|
T Consensus 91 V~i~tp 96 (357)
T 3ec7_A 91 VIITAS 96 (357)
T ss_dssp EEECSC
T ss_pred EEEcCC
Confidence 766555
No 334
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=34.38 E-value=3.1e+02 Score=26.03 Aligned_cols=69 Identities=6% Similarity=-0.047 Sum_probs=42.5
Q ss_pred CceEEeeec----Cchh--HHHHHHhc--CCCccEEEEEcccHHHHHHHHHhcCCC--CeecCccccchhhhcccCccEE
Q 016377 12 AWRVLEFYS----GIGG--MRYSLMKA--DVSAQVVEAFDINDKANDVYELNFGHR--PYQGNIQNLTAAELDMYGAHAW 81 (390)
Q Consensus 12 ~~~~~dlF~----G~Gg--~~~g~~~a--G~~~~~v~a~e~~~~a~~~~~~n~~~~--~~~~di~~~~~~~~~~~~~D~l 81 (390)
++++.=+=+ |..| .-.++... ++ +++..+|.++...+.+...++.. ....|+.++- .+.++|++
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~--~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll----~~~~vD~V 93 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQF--QITALYSPKIETSIATIQRLKLSNATAFPTLESFA----SSSTIDMI 93 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTE--EEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHH----HCSSCSEE
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCe--EEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHh----cCCCCCEE
Confidence 467665544 3222 23345554 54 48999999999988888887643 2345555542 22258888
Q ss_pred EeCCC
Q 016377 82 LLSPP 86 (390)
Q Consensus 82 ~~g~P 86 (390)
+...|
T Consensus 94 ~i~tp 98 (438)
T 3btv_A 94 VIAIQ 98 (438)
T ss_dssp EECSC
T ss_pred EEeCC
Confidence 77666
No 335
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=33.21 E-value=2.8e+02 Score=25.27 Aligned_cols=67 Identities=16% Similarity=0.167 Sum_probs=41.1
Q ss_pred CCceEEeeecCchhHHH-----HHHhc-CCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeC
Q 016377 11 EAWRVLEFYSGIGGMRY-----SLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLS 84 (390)
Q Consensus 11 ~~~~~~dlF~G~Gg~~~-----g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g 84 (390)
.++++. +-|+|.+.. ++... |+ +++..+|.++..++.+...++-..+ .|..++- .+.++|+++..
T Consensus 26 ~~~rig--iIG~G~~g~~~~~~~l~~~~~~--~l~av~d~~~~~~~~~a~~~g~~~~-~~~~~ll----~~~~~D~V~i~ 96 (350)
T 3rc1_A 26 NPIRVG--VIGCADIAWRRALPALEAEPLT--EVTAIASRRWDRAKRFTERFGGEPV-EGYPALL----ERDDVDAVYVP 96 (350)
T ss_dssp CCEEEE--EESCCHHHHHTHHHHHHHCTTE--EEEEEEESSHHHHHHHHHHHCSEEE-ESHHHHH----TCTTCSEEEEC
T ss_pred CceEEE--EEcCcHHHHHHHHHHHHhCCCe--EEEEEEcCCHHHHHHHHHHcCCCCc-CCHHHHh----cCCCCCEEEEC
Confidence 345554 446664443 34444 54 4888999999988888888764333 5555542 22248887765
Q ss_pred CC
Q 016377 85 PP 86 (390)
Q Consensus 85 ~P 86 (390)
.|
T Consensus 97 tp 98 (350)
T 3rc1_A 97 LP 98 (350)
T ss_dssp CC
T ss_pred CC
Confidence 55
No 336
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=32.18 E-value=2.9e+02 Score=25.11 Aligned_cols=64 Identities=13% Similarity=0.120 Sum_probs=37.0
Q ss_pred CceEEeeecCchhHHHH-----HHhc-CCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCC
Q 016377 12 AWRVLEFYSGIGGMRYS-----LMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g-----~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
++++.=+ |+|.+... +... + ++++..+|.++...+ ..++......|..++- ...++|+++...
T Consensus 7 ~~rvgii--G~G~~g~~~~~~~~~~~~~--~~l~av~d~~~~~~~---~~~~~~~~~~~~~~ll----~~~~vD~V~i~t 75 (352)
T 3kux_A 7 KIKVGLL--GYGYASKTFHAPLIMGTPG--LELAGVSSSDASKVH---ADWPAIPVVSDPQMLF----NDPSIDLIVIPT 75 (352)
T ss_dssp CEEEEEE--CCSHHHHHTHHHHHHTSTT--EEEEEEECSCHHHHH---TTCSSCCEESCHHHHH----HCSSCCEEEECS
T ss_pred CceEEEE--CCCHHHHHHHHHHHhhCCC--cEEEEEECCCHHHHH---hhCCCCceECCHHHHh----cCCCCCEEEEeC
Confidence 4666554 44443332 3333 5 458999999988766 3455544556666553 222588766555
Q ss_pred C
Q 016377 86 P 86 (390)
Q Consensus 86 P 86 (390)
|
T Consensus 76 p 76 (352)
T 3kux_A 76 P 76 (352)
T ss_dssp C
T ss_pred C
Confidence 4
No 337
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=31.99 E-value=2.9e+02 Score=25.08 Aligned_cols=66 Identities=14% Similarity=0.302 Sum_probs=38.9
Q ss_pred CceEEeeecCchhHHHHHH----hc-CCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCC
Q 016377 12 AWRVLEFYSGIGGMRYSLM----KA-DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~----~a-G~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
++++. +-|+|.+...+. .. | ++++..+|.++..++.+...++-.. ..|..++ +.+.++|+++...|
T Consensus 5 ~~~vg--iiG~G~~g~~~~~~l~~~~~--~~lvav~d~~~~~~~~~~~~~g~~~-~~~~~~~----l~~~~~D~V~i~tp 75 (354)
T 3db2_A 5 PVGVA--AIGLGRWAYVMADAYTKSEK--LKLVTCYSRTEDKREKFGKRYNCAG-DATMEAL----LAREDVEMVIITVP 75 (354)
T ss_dssp CEEEE--EECCSHHHHHHHHHHTTCSS--EEEEEEECSSHHHHHHHHHHHTCCC-CSSHHHH----HHCSSCCEEEECSC
T ss_pred cceEE--EEccCHHHHHHHHHHHhCCC--cEEEEEECCCHHHHHHHHHHcCCCC-cCCHHHH----hcCCCCCEEEEeCC
Confidence 34554 445664443333 22 5 4488899999999888877775433 3455444 22225888665544
No 338
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=30.42 E-value=35 Score=30.94 Aligned_cols=54 Identities=11% Similarity=0.039 Sum_probs=37.6
Q ss_pred ceEEeeecCc--hhHHHHHH--hc-CCCccEEEEEcccHHHHHHHHHhcCC------CCeecCccccc
Q 016377 13 WRVLEFYSGI--GGMRYSLM--KA-DVSAQVVEAFDINDKANDVYELNFGH------RPYQGNIQNLT 69 (390)
Q Consensus 13 ~~~~dlF~G~--Gg~~~g~~--~a-G~~~~~v~a~e~~~~a~~~~~~n~~~------~~~~~di~~~~ 69 (390)
-.+|||=||. +|...-+. .+ +. -|.++|.++..++.-+++..+ ..+++|+++..
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~a---rVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~ 144 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPES---RVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPA 144 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTC---EEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHH
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCC---EEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChh
Confidence 4799999997 44443332 22 32 589999999988877777754 24678888763
No 339
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=29.23 E-value=77 Score=30.20 Aligned_cols=48 Identities=8% Similarity=0.032 Sum_probs=38.8
Q ss_pred CCCceEEeeecCchhHHHHHH-hcCCCccEEEEEcccHHHHHHHHHhcC
Q 016377 10 GEAWRVLEFYSGIGGMRYSLM-KADVSAQVVEAFDINDKANDVYELNFG 57 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~g~~-~aG~~~~~v~a~e~~~~a~~~~~~n~~ 57 (390)
...-.++|+=|++|..++-|. ..+-+...|+|+|-++.+.+.++.|..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~ 273 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLR 273 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHH
Confidence 455689999999999999877 444222379999999999999999863
No 340
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=28.35 E-value=64 Score=29.96 Aligned_cols=67 Identities=21% Similarity=0.233 Sum_probs=43.8
Q ss_pred CceEEeeecCchhHHH-----HHHhc-CCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCC
Q 016377 12 AWRVLEFYSGIGGMRY-----SLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~-----g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
++++. +-|+|.+.. .+... | ++++..+|.++..++.+...++......|..++-. +.++|+++...
T Consensus 5 ~~rig--iIG~G~~g~~~~~~~l~~~~~--~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~----~~~vD~V~i~t 76 (359)
T 3m2t_A 5 LIKVG--LVGIGAQMQENLLPSLLQMQD--IRIVAACDSDLERARRVHRFISDIPVLDNVPAMLN----QVPLDAVVMAG 76 (359)
T ss_dssp CEEEE--EECCSHHHHHTHHHHHHTCTT--EEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHH----HSCCSEEEECS
T ss_pred cceEE--EECCCHHHHHHHHHHHHhCCC--cEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhc----CCCCCEEEEcC
Confidence 45665 445554433 33333 5 45899999999999998888876656667666532 22488877666
Q ss_pred C
Q 016377 86 P 86 (390)
Q Consensus 86 P 86 (390)
|
T Consensus 77 p 77 (359)
T 3m2t_A 77 P 77 (359)
T ss_dssp C
T ss_pred C
Confidence 5
No 341
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=27.34 E-value=3.2e+02 Score=25.08 Aligned_cols=76 Identities=7% Similarity=0.049 Sum_probs=45.1
Q ss_pred CCceEEeee-cCchhHH-------HHHHhcC-CC---ccEE----EEEcccHHHHHHHHHhcCCCCeecCccccchhhhc
Q 016377 11 EAWRVLEFY-SGIGGMR-------YSLMKAD-VS---AQVV----EAFDINDKANDVYELNFGHRPYQGNIQNLTAAELD 74 (390)
Q Consensus 11 ~~~~~~dlF-~G~Gg~~-------~g~~~aG-~~---~~~v----~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~ 74 (390)
.+++|.=+= +|..|.. .++...+ +. ...+ ..+|.++..++.+...++...+..|+.++-.
T Consensus 5 ~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~---- 80 (383)
T 3oqb_A 5 QRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALA---- 80 (383)
T ss_dssp EEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHH----
T ss_pred ceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhc----
Confidence 456666555 5555555 4555544 21 0011 5899999999999888876555567766532
Q ss_pred ccCccEEEe-CCCCchh
Q 016377 75 MYGAHAWLL-SPPCQPY 90 (390)
Q Consensus 75 ~~~~D~l~~-g~PCq~f 90 (390)
+.++|+++. +|+-.-+
T Consensus 81 ~~~iD~V~i~tp~~~h~ 97 (383)
T 3oqb_A 81 DKNDTMFFDAATTQARP 97 (383)
T ss_dssp CSSCCEEEECSCSSSSH
T ss_pred CCCCCEEEECCCchHHH
Confidence 224887654 4443333
No 342
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=26.97 E-value=62 Score=29.08 Aligned_cols=68 Identities=12% Similarity=0.107 Sum_probs=41.4
Q ss_pred eEEeeecCchhH----HHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCC--CeecCccccch-hhh----cc--cCccE
Q 016377 14 RVLEFYSGIGGM----RYSLMKADVSAQVVEAFDINDKANDVYELNFGHR--PYQGNIQNLTA-AEL----DM--YGAHA 80 (390)
Q Consensus 14 ~~~dlF~G~Gg~----~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~--~~~~di~~~~~-~~~----~~--~~~D~ 80 (390)
|++=.-.|.+|+ ...|.+.|.+ |+.++.+++..+.....++.. .+.+|+.+... +.+ .+ +.+|+
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~---V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 106 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGAR---VFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV 106 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCE---EEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 444444444444 4445567975 667788888887777777654 36788887643 111 11 26999
Q ss_pred EEeC
Q 016377 81 WLLS 84 (390)
Q Consensus 81 l~~g 84 (390)
|+-.
T Consensus 107 LVNN 110 (273)
T 4fgs_A 107 LFVN 110 (273)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9843
No 343
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=26.59 E-value=71 Score=29.26 Aligned_cols=65 Identities=12% Similarity=0.092 Sum_probs=39.5
Q ss_pred ceEEeeecCchhHHHH----HHhc-CCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCC
Q 016377 13 WRVLEFYSGIGGMRYS----LMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 13 ~~~~dlF~G~Gg~~~g----~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
+++. +-|+|.+... +... | ++++..+|.++..++.+...++ .....|..++- .+.++|+++...|
T Consensus 5 ~rvg--iiG~G~~g~~~~~~l~~~~~--~~l~av~d~~~~~~~~~a~~~g-~~~~~~~~~~l----~~~~~D~V~i~tp 74 (344)
T 3euw_A 5 LRIA--LFGAGRIGHVHAANIAANPD--LELVVIADPFIEGAQRLAEANG-AEAVASPDEVF----ARDDIDGIVIGSP 74 (344)
T ss_dssp EEEE--EECCSHHHHHHHHHHHHCTT--EEEEEEECSSHHHHHHHHHTTT-CEEESSHHHHT----TCSCCCEEEECSC
T ss_pred eEEE--EECCcHHHHHHHHHHHhCCC--cEEEEEECCCHHHHHHHHHHcC-CceeCCHHHHh----cCCCCCEEEEeCC
Confidence 4544 4455543333 3333 5 4488899999999998888876 33445655542 2224887666555
No 344
>2lci_A Protein OR36; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=26.30 E-value=71 Score=23.69 Aligned_cols=47 Identities=11% Similarity=0.179 Sum_probs=35.4
Q ss_pred hhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHHhCCceeEEE
Q 016377 104 AFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEF 155 (390)
Q Consensus 104 ~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~ 155 (390)
..|+.+++.++..+ ..++|++=.- ........+...+++.||.+.-.
T Consensus 61 kqllkemleliskl--gykvflllqd---qdeneleefkrkiesqgyevrkv 107 (134)
T 2lci_A 61 KQLLKEMLELISKL--GYKVFLLLQD---QDENELEEFKRKIESQGYEVRKV 107 (134)
T ss_dssp HHHHHHHHHHHHHH--TCCEEEEEEC---SCHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHHh--CceeEEEeec---CchhHHHHHHHHHHhCCeeeeec
Confidence 35789999999998 8888876432 12345788888999999998654
No 345
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=26.10 E-value=3.9e+02 Score=24.65 Aligned_cols=68 Identities=21% Similarity=0.272 Sum_probs=40.5
Q ss_pred CceEEeeecC-chh--HHHHHHhc-CCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCC
Q 016377 12 AWRVLEFYSG-IGG--MRYSLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 12 ~~~~~dlF~G-~Gg--~~~g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
++++.=+=+| ..| .--++... + ++++..+|.++...+.+...+.-. ...|+.++-.+ .++|+++...|
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~--~~l~av~d~~~~~~~~~a~~~g~~-~~~~~~ell~~----~~vD~V~i~tp 73 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPD--AQIVAACDPNEDVRERFGKEYGIP-VFATLAEMMQH----VQMDAVYIASP 73 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTT--EEEEEEECSCHHHHHHHHHHHTCC-EESSHHHHHHH----SCCSEEEECSC
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCC--eEEEEEEeCCHHHHHHHHHHcCCC-eECCHHHHHcC----CCCCEEEEcCC
Confidence 4566544444 222 12234443 5 459999999999888888777433 44666665322 24888776655
No 346
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=25.69 E-value=1.4e+02 Score=27.43 Aligned_cols=70 Identities=19% Similarity=0.182 Sum_probs=41.8
Q ss_pred CCCceEEeeecC-chh-HHHHHHhc--CCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCC
Q 016377 10 GEAWRVLEFYSG-IGG-MRYSLMKA--DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 10 ~~~~~~~dlF~G-~Gg-~~~g~~~a--G~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
.+++++.=+=+| +|. .-.++... | ++++..+|.++..++.+...++- ....|..++- .+.++|+++...
T Consensus 11 ~~~~rvgiiG~G~~g~~~~~~l~~~~~~--~~lvav~d~~~~~~~~~~~~~~~-~~~~~~~~ll----~~~~~D~V~i~t 83 (354)
T 3q2i_A 11 DRKIRFALVGCGRIANNHFGALEKHADR--AELIDVCDIDPAALKAAVERTGA-RGHASLTDML----AQTDADIVILTT 83 (354)
T ss_dssp SSCEEEEEECCSTTHHHHHHHHHHTTTT--EEEEEEECSSHHHHHHHHHHHCC-EEESCHHHHH----HHCCCSEEEECS
T ss_pred CCcceEEEEcCcHHHHHHHHHHHhCCCC--eEEEEEEcCCHHHHHHHHHHcCC-ceeCCHHHHh----cCCCCCEEEECC
Confidence 345666544444 222 22345554 5 44899999999999888888763 3345555542 222488877655
Q ss_pred C
Q 016377 86 P 86 (390)
Q Consensus 86 P 86 (390)
|
T Consensus 84 p 84 (354)
T 3q2i_A 84 P 84 (354)
T ss_dssp C
T ss_pred C
Confidence 5
No 347
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=25.18 E-value=1.3e+02 Score=28.96 Aligned_cols=66 Identities=17% Similarity=0.116 Sum_probs=41.6
Q ss_pred eecCchhHHHHHH----h-cCCCccEEEEEcc----------cHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEE
Q 016377 18 FYSGIGGMRYSLM----K-ADVSAQVVEAFDI----------NDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWL 82 (390)
Q Consensus 18 lF~G~Gg~~~g~~----~-aG~~~~~v~a~e~----------~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~ 82 (390)
...|.|.....+. + .|.+ +|...|. |.+++..++.......-..+...++.+++...++|+++
T Consensus 213 aVqG~GnVG~~~a~~L~e~~Gak--vVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil~~~~DIli 290 (415)
T 2tmg_A 213 AVQGFGNVGQFAALLISQELGSK--VVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLELDVDILV 290 (415)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCE--EEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHTTCSCSEEE
T ss_pred EEECCcHHHHHHHHHHHHhcCCE--EEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhhcCCCcEEE
Confidence 3567775444333 4 7855 9999998 88999988887542111112233444555545799999
Q ss_pred eCCCCc
Q 016377 83 LSPPCQ 88 (390)
Q Consensus 83 ~g~PCq 88 (390)
||-
T Consensus 291 ---P~A 293 (415)
T 2tmg_A 291 ---PAA 293 (415)
T ss_dssp ---ECS
T ss_pred ---ecC
Confidence 875
No 348
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=24.96 E-value=1.6e+02 Score=23.02 Aligned_cols=63 Identities=16% Similarity=0.161 Sum_probs=37.6
Q ss_pred ecCchhHHHH----HHhcCCCccEEEEEccc-HHHHHHHHHhcCC--CCeecCccccch---hhhcccCccEEEeCCC
Q 016377 19 YSGIGGMRYS----LMKADVSAQVVEAFDIN-DKANDVYELNFGH--RPYQGNIQNLTA---AELDMYGAHAWLLSPP 86 (390)
Q Consensus 19 F~G~Gg~~~g----~~~aG~~~~~v~a~e~~-~~a~~~~~~n~~~--~~~~~di~~~~~---~~~~~~~~D~l~~g~P 86 (390)
.+|+|-.... |...|++ |..+|.+ +..++.....++. .++.+|..+... ..+. +.|+++...+
T Consensus 8 I~G~G~vG~~la~~L~~~g~~---V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~~ 80 (153)
T 1id1_A 8 VCGHSILAINTILQLNQRGQN---VTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGID--RCRAILALSD 80 (153)
T ss_dssp EECCSHHHHHHHHHHHHTTCC---EEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTT--TCSEEEECSS
T ss_pred EECCCHHHHHHHHHHHHCCCC---EEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChh--hCCEEEEecC
Confidence 3476744333 4456875 6677886 5656666555543 467788876432 1233 4898887755
No 349
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=24.88 E-value=2e+02 Score=20.78 Aligned_cols=69 Identities=20% Similarity=0.211 Sum_probs=38.5
Q ss_pred CceEEeeecCchhHHHH----HHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccch-hhhcccCccEEEeCCC
Q 016377 12 AWRVLEFYSGIGGMRYS----LMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA-AELDMYGAHAWLLSPP 86 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g----~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~-~~~~~~~~D~l~~g~P 86 (390)
+.+++-+ |+|++... |...|.. .|.+++.++...+... ...-..+..|+.+... ..+.. ++|+++-..|
T Consensus 5 ~~~v~I~--G~G~iG~~~~~~l~~~g~~--~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-~~d~vi~~~~ 78 (118)
T 3ic5_A 5 RWNICVV--GAGKIGQMIAALLKTSSNY--SVTVADHDLAALAVLN-RMGVATKQVDAKDEAGLAKALG-GFDAVISAAP 78 (118)
T ss_dssp CEEEEEE--CCSHHHHHHHHHHHHCSSE--EEEEEESCHHHHHHHH-TTTCEEEECCTTCHHHHHHHTT-TCSEEEECSC
T ss_pred cCeEEEE--CCCHHHHHHHHHHHhCCCc--eEEEEeCCHHHHHHHH-hCCCcEEEecCCCHHHHHHHHc-CCCEEEECCC
Confidence 3444433 55655444 3446732 4788899988777665 2222345667765421 11222 4899887765
No 350
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=24.81 E-value=1.7e+02 Score=25.99 Aligned_cols=67 Identities=15% Similarity=0.132 Sum_probs=40.2
Q ss_pred eEEeeecCchhHHHH----HHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCCCc
Q 016377 14 RVLEFYSGIGGMRYS----LMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPPCQ 88 (390)
Q Consensus 14 ~~~dlF~G~Gg~~~g----~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~PCq 88 (390)
+++-+ |+||+..+ |..+|+. .|..++.+....+.+...+.. ..+.-.+.+++...++|+++-.-|..
T Consensus 122 ~~lvl--GaGg~~~aia~~L~~~G~~--~v~i~~R~~~~a~~la~~~~~----~~~~~~~~~~l~~~~~DivInaTp~g 192 (272)
T 3pwz_A 122 RVLLL--GAGGAVRGALLPFLQAGPS--ELVIANRDMAKALALRNELDH----SRLRISRYEALEGQSFDIVVNATSAS 192 (272)
T ss_dssp EEEEE--CCSHHHHHHHHHHHHTCCS--EEEEECSCHHHHHHHHHHHCC----TTEEEECSGGGTTCCCSEEEECSSGG
T ss_pred EEEEE--CccHHHHHHHHHHHHcCCC--EEEEEeCCHHHHHHHHHHhcc----CCeeEeeHHHhcccCCCEEEECCCCC
Confidence 44433 66766554 4557875 677778888888887777764 11222222233212599999877743
No 351
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=24.76 E-value=1.3e+02 Score=27.48 Aligned_cols=69 Identities=10% Similarity=0.011 Sum_probs=44.4
Q ss_pred CCCceEEeeecCchhHHH-----HHHhc-CCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEe
Q 016377 10 GEAWRVLEFYSGIGGMRY-----SLMKA-DVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 10 ~~~~~~~dlF~G~Gg~~~-----g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
+.++|+.-+ |+|.+.. ++... + ++++..+|.++..++.+...|+......|..++- .+.++|+++.
T Consensus 21 ~~mirigiI--G~G~ig~~~~~~~~~~~~~--~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell----~~~~iDaV~I 92 (350)
T 4had_A 21 QSMLRFGII--STAKIGRDNVVPAIQDAEN--CVVTAIASRDLTRAREMADRFSVPHAFGSYEEML----ASDVIDAVYI 92 (350)
T ss_dssp -CCEEEEEE--SCCHHHHHTHHHHHHHCSS--EEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHH----HCSSCSEEEE
T ss_pred cCccEEEEE--cChHHHHHHHHHHHHhCCC--eEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHh----cCCCCCEEEE
Confidence 345676654 5554432 34443 5 4589999999999999999988654556766653 2225888765
Q ss_pred CCC
Q 016377 84 SPP 86 (390)
Q Consensus 84 g~P 86 (390)
+.|
T Consensus 93 ~tP 95 (350)
T 4had_A 93 PLP 95 (350)
T ss_dssp CSC
T ss_pred eCC
Confidence 555
No 352
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=23.94 E-value=4.1e+02 Score=24.13 Aligned_cols=67 Identities=13% Similarity=0.142 Sum_probs=39.6
Q ss_pred CceEEeeecCchhHHH----HHHhc-CCCccEEEEEcccHHHHHHHHHhcCC---CCeecCccccchhhhcccCccEEEe
Q 016377 12 AWRVLEFYSGIGGMRY----SLMKA-DVSAQVVEAFDINDKANDVYELNFGH---RPYQGNIQNLTAAELDMYGAHAWLL 83 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~----g~~~a-G~~~~~v~a~e~~~~a~~~~~~n~~~---~~~~~di~~~~~~~~~~~~~D~l~~ 83 (390)
++++. +-|+|.+.. ++... + ++++..+|.++...+.+...++- .....|..++ +.+.++|+++.
T Consensus 6 ~~~vg--iiG~G~ig~~~~~~l~~~~~--~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~l----l~~~~~D~V~i 77 (362)
T 1ydw_A 6 QIRIG--VMGCADIARKVSRAIHLAPN--ATISGVASRSLEKAKAFATANNYPESTKIHGSYESL----LEDPEIDALYV 77 (362)
T ss_dssp CEEEE--EESCCTTHHHHHHHHHHCTT--EEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHH----HHCTTCCEEEE
T ss_pred ceEEE--EECchHHHHHHHHHHhhCCC--cEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHH----hcCCCCCEEEE
Confidence 35554 345554333 33333 5 44889999999988888887763 2233454443 22224888877
Q ss_pred CCC
Q 016377 84 SPP 86 (390)
Q Consensus 84 g~P 86 (390)
..|
T Consensus 78 ~tp 80 (362)
T 1ydw_A 78 PLP 80 (362)
T ss_dssp CCC
T ss_pred cCC
Confidence 666
No 353
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=23.93 E-value=1e+02 Score=26.18 Aligned_cols=134 Identities=13% Similarity=0.025 Sum_probs=69.8
Q ss_pred CCcccccCCCCCceEEeeecCchhHHHH------HHhcCCCccEEEEEcccHHHHHHHH----HhcCCCCeecCccc---
Q 016377 1 MEKDMCKNDGEAWRVLEFYSGIGGMRYS------LMKADVSAQVVEAFDINDKANDVYE----LNFGHRPYQGNIQN--- 67 (390)
Q Consensus 1 ~~~~~~~~~~~~~~~~dlF~G~Gg~~~g------~~~aG~~~~~v~a~e~~~~a~~~~~----~n~~~~~~~~di~~--- 67 (390)
|+.+|+. .-+++=-.+|+.|.-.+ |.+.|.+..+|. .+.|.+... ....+. +..|+.+
T Consensus 1 ~~~~~l~----~k~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~----T~~A~~fi~~~~~~~l~~~-v~~~~~~~~~ 71 (194)
T 1p3y_1 1 MSISILK----DKKLLIGICGSISSVGISSYLLYFKSFFKEIRVVM----TKTAEDLIPAHTVSYFCDH-VYSEHGENGK 71 (194)
T ss_dssp --CTTGG----GCEEEEEECSCGGGGGTHHHHHHHTTTSSEEEEEE----CHHHHHHSCHHHHGGGSSE-EECTTCSSSC
T ss_pred CcccccC----CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEE----chhHHHHHHHHHHHHhcCC-EeccccccCC
Confidence 6667643 23677778888766643 445686633333 334433321 112223 3344432
Q ss_pred -cchhhhcccCccEEEeCCCCchhhhccCCCCCCChhhhhHHHHHHhcccccCCCcEEEEeccccccChHHHHHHHHHHH
Q 016377 68 -LTAAELDMYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILA 146 (390)
Q Consensus 68 -~~~~~~~~~~~D~l~~g~PCq~fS~~g~~~~~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~~~~~~~~~~~~~~l~ 146 (390)
+..-.+.. ..|+++.- ||..-+.+.-..|..|+ |+-..+.. .- +|-+++--.-..+......++=+..|.
T Consensus 72 ~~~hi~l~~-~aD~~vIa-PaTanTlAKiA~GiaDn---Llt~~a~a--~~--~pvvl~Pamn~~m~~~p~~~~Nl~~L~ 142 (194)
T 1p3y_1 72 RHSHVEIGR-WADIYCII-PATANILGQTANGVAMN---LVATTVLA--HP--HNTIFFPNMNDLMWNKTVVSRNIEQLR 142 (194)
T ss_dssp CCCHHHHHH-HCSEEEEE-EECHHHHHHHHTTCCSS---HHHHHHHH--SS--SCCEEEECCCHHHHTCHHHHHHHHHHH
T ss_pred CcCcccccc-cCCEEEEe-CCCHHHHHHHHhhccCC---HHHHHHHH--cC--CCEEEEECCChhhcCCHHHHHHHHHHH
Confidence 11111112 26766654 89999988777677664 33333332 22 688876543333433444555567788
Q ss_pred hCCcee
Q 016377 147 NSDYLT 152 (390)
Q Consensus 147 ~~GY~~ 152 (390)
+.||.+
T Consensus 143 ~~G~~i 148 (194)
T 1p3y_1 143 KDGHIV 148 (194)
T ss_dssp HHTCEE
T ss_pred HCCCEE
Confidence 888754
No 354
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=23.01 E-value=3.8e+02 Score=25.81 Aligned_cols=53 Identities=8% Similarity=0.050 Sum_probs=35.4
Q ss_pred HHHhc--CCCccEEEEEcccHHHHHHHHHhcCCC--CeecCccccchhhhcccCccEEEeCCC
Q 016377 28 SLMKA--DVSAQVVEAFDINDKANDVYELNFGHR--PYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 28 g~~~a--G~~~~~v~a~e~~~~a~~~~~~n~~~~--~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
++... | ++++..+|.++..++.+...++-. ....|+.++- ...++|+++...|
T Consensus 61 ~l~~~~~~--~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell----~~~~vD~V~I~tp 117 (479)
T 2nvw_A 61 AIQQLSSQ--FQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFA----QYKDIDMIVVSVK 117 (479)
T ss_dssp HHHHTTTT--EEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHH----HCTTCSEEEECSC
T ss_pred HHHhcCCC--eEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHh----cCCCCCEEEEcCC
Confidence 44444 5 448999999999998888887643 2445655542 2225888887766
No 355
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=22.15 E-value=1.3e+02 Score=24.59 Aligned_cols=56 Identities=16% Similarity=0.033 Sum_probs=41.2
Q ss_pred HHHHHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccch--hhhcccCccEEEeC
Q 016377 25 MRYSLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTA--AELDMYGAHAWLLS 84 (390)
Q Consensus 25 ~~~g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~--~~~~~~~~D~l~~g 84 (390)
++.-|++.|++ ++.| -++.|++..+---|+..+...+.+++. .++.+.++|++++=
T Consensus 28 l~~~Lk~~G~~--v~VA--~npAAlkLlevaDPe~~Y~~~~~diD~~l~~i~e~~~d~~~~F 85 (157)
T 1kjn_A 28 TSHKLKKKGFR--VTVT--ANPAALRLVQVADPEGIYTDEMVDLESCINELAEGDYEFLAGF 85 (157)
T ss_dssp HHHHHHHTTCE--EEEE--ECHHHHHHHHHHSTTCCSCSEEEEHHHHHHHCCTTSCSEEEEE
T ss_pred HHHHHHhcCCe--eEEe--cCHHHHhheeccCCCcchhcceeeHHHHHhhhhhcCCCEEEEE
Confidence 56678889987 6666 378999999999999888777766654 23333468988853
No 356
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=22.08 E-value=4.2e+02 Score=23.57 Aligned_cols=62 Identities=13% Similarity=0.140 Sum_probs=38.7
Q ss_pred ecCchhHHH-----HHHhcCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCC
Q 016377 19 YSGIGGMRY-----SLMKADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 19 F~G~Gg~~~-----g~~~aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
+-|+|++.. ++...|++ ++..+|.++...+.+...++......|..++ +.+.++|+++-..|
T Consensus 5 iiG~G~~g~~~~~~~l~~~~~~--~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~----l~~~~~D~V~i~tp 71 (332)
T 2glx_A 5 LIGASTIAREWVIGAIRATGGE--VVSMMSTSAERGAAYATENGIGKSVTSVEEL----VGDPDVDAVYVSTT 71 (332)
T ss_dssp EESCCHHHHHTHHHHHHHTTCE--EEEEECSCHHHHHHHHHHTTCSCCBSCHHHH----HTCTTCCEEEECSC
T ss_pred EEcccHHHHHhhhHHhhcCCCe--EEEEECCCHHHHHHHHHHcCCCcccCCHHHH----hcCCCCCEEEEeCC
Confidence 456665443 34445654 8889999999888888777643233444443 22224888777666
No 357
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=21.13 E-value=1.8e+02 Score=26.46 Aligned_cols=67 Identities=15% Similarity=0.135 Sum_probs=40.5
Q ss_pred CceEEeeecCchhHHHHHH----h-cCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCCC
Q 016377 12 AWRVLEFYSGIGGMRYSLM----K-ADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSPP 86 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g~~----~-aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~P 86 (390)
++++. +-|+|.+...+. . .+ ++++..+|.++..++.+...++......|..++- ...++|+++...|
T Consensus 2 ~~rvg--iIG~G~~g~~~~~~l~~~~~--~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll----~~~~~D~V~i~tp 73 (344)
T 3ezy_A 2 SLRIG--VIGLGRIGTIHAENLKMIDD--AILYAISDVREDRLREMKEKLGVEKAYKDPHELI----EDPNVDAVLVCSS 73 (344)
T ss_dssp CEEEE--EECCSHHHHHHHHHGGGSTT--EEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHH----HCTTCCEEEECSC
T ss_pred eeEEE--EEcCCHHHHHHHHHHHhCCC--cEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHh----cCCCCCEEEEcCC
Confidence 34543 445564443332 2 24 4488889999999888888887543445665542 2224887766555
No 358
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=20.49 E-value=1.3e+02 Score=26.61 Aligned_cols=56 Identities=16% Similarity=0.097 Sum_probs=31.4
Q ss_pred HHHHHHhcCCCccEEEEEccc--HHHHHHHHHhcCC-CCeecCccccch--hhhcccCccEEEe
Q 016377 25 MRYSLMKADVSAQVVEAFDIN--DKANDVYELNFGH-RPYQGNIQNLTA--AELDMYGAHAWLL 83 (390)
Q Consensus 25 ~~~g~~~aG~~~~~v~a~e~~--~~a~~~~~~n~~~-~~~~~di~~~~~--~~~~~~~~D~l~~ 83 (390)
....|.+.|.+ ++. ++.+ +.+.+..+..... ..+..|+.+... ..+....+|+|+-
T Consensus 25 iA~~la~~Ga~--Vvi-~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVN 85 (247)
T 4hp8_A 25 IAVGLAAAGAE--VVC-AARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVN 85 (247)
T ss_dssp HHHHHHHTTCE--EEE-EESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEE
T ss_pred HHHHHHHcCCE--EEE-EeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence 45556678976 444 4444 4555555554443 346778876432 1122236999984
No 359
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=20.17 E-value=4.4e+02 Score=23.36 Aligned_cols=64 Identities=16% Similarity=0.204 Sum_probs=37.8
Q ss_pred CceEEeeecCchhHHHH-----HHh-cCCCccEEEEEcccHHHHHHHHHhcCCCCeecCccccchhhhcccCccEEEeCC
Q 016377 12 AWRVLEFYSGIGGMRYS-----LMK-ADVSAQVVEAFDINDKANDVYELNFGHRPYQGNIQNLTAAELDMYGAHAWLLSP 85 (390)
Q Consensus 12 ~~~~~dlF~G~Gg~~~g-----~~~-aG~~~~~v~a~e~~~~a~~~~~~n~~~~~~~~di~~~~~~~~~~~~~D~l~~g~ 85 (390)
++++. +-|+|.+... +.. .|+ +++..+|.++...+.+...++.. ...|..+ + ..++|+++...
T Consensus 5 ~~~vg--iiG~G~~g~~~~~~~l~~~~~~--~lvav~d~~~~~~~~~~~~~g~~-~~~~~~~-----l-~~~~D~V~i~t 73 (319)
T 1tlt_A 5 KLRIG--VVGLGGIAQKAWLPVLAAASDW--TLQGAWSPTRAKALPICESWRIP-YADSLSS-----L-AASCDAVFVHS 73 (319)
T ss_dssp CEEEE--EECCSTHHHHTHHHHHHSCSSE--EEEEEECSSCTTHHHHHHHHTCC-BCSSHHH-----H-HTTCSEEEECS
T ss_pred cceEE--EECCCHHHHHHHHHHHHhCCCe--EEEEEECCCHHHHHHHHHHcCCC-ccCcHHH-----h-hcCCCEEEEeC
Confidence 35554 4566654432 333 354 48889999988877777766533 3334333 3 22588887766
Q ss_pred C
Q 016377 86 P 86 (390)
Q Consensus 86 P 86 (390)
|
T Consensus 74 p 74 (319)
T 1tlt_A 74 S 74 (319)
T ss_dssp C
T ss_pred C
Confidence 6
No 360
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=20.08 E-value=1.2e+02 Score=25.70 Aligned_cols=45 Identities=18% Similarity=0.307 Sum_probs=33.3
Q ss_pred EEEEeccccccChHHHHHHHHHHHhCCceeEEEEe-CCCCcCCCccCcEEEEEEE
Q 016377 123 MLFVENVVGFETSDTHAKMIEILANSDYLTQEFIL-SPLQFGVPYSRPRYFCLAK 176 (390)
Q Consensus 123 ~~~~ENV~~~~~~~~~~~~~~~l~~~GY~~~~~~l-~a~~~G~pq~R~R~~~i~~ 176 (390)
-+++||-+|. +..+...|.+.||++..-.+ .+.+.|. .|+.++..
T Consensus 33 sVlVeN~pGv-----LaRItglfsrRG~NI~SLtV~~ted~gi----sRitIvV~ 78 (193)
T 2fgc_A 33 SMLVHNKPGV-----MRKVANLFARRGFNISSITVGESETPGL----SRLVIMVK 78 (193)
T ss_dssp EEEEECCTTH-----HHHHHHHHHTTTCEEEEEEEEECSSTTE----EEEEEEEE
T ss_pred EEEECCCChH-----HHHHHHHHHHCCceEEEEEeeccCCCCE----EEEEEEEE
Confidence 5688999997 78899999999999977544 4666653 45554443
Done!