Query         016378
Match_columns 390
No_of_seqs    247 out of 1013
Neff          4.5 
Searched_HMMs 29240
Date          Mon Mar 25 12:35:01 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016378.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016378hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1hks_A Heat-shock transcriptio 100.0 2.6E-40 9.1E-45  278.4   6.9   95   10-104     2-106 (106)
  2 2ldu_A Heat shock factor prote 100.0 1.4E-39 4.8E-44  281.9   8.9  104    4-107     9-123 (125)
  3 3hts_B Heat shock transcriptio 100.0   1E-33 3.5E-38  237.9   4.7   86    4-89      4-100 (102)
  4 2dao_A Transcription factor ET  90.2    0.41 1.4E-05   41.1   5.4   79    9-87      5-89  (118)
  5 1awc_A Protein (GA binding pro  89.1    0.45 1.6E-05   40.3   4.8   69   19-87      7-80  (110)
  6 4avp_A ETS translocation varia  89.0    0.45 1.5E-05   40.0   4.7   74   14-87     13-91  (106)
  7 1wwx_A E74-like factor 5 ESE-2  88.4    0.43 1.5E-05   40.3   4.2   81    6-87      2-89  (107)
  8 1bc8_C SAP-1, protein (SAP-1 E  88.0    0.19 6.5E-06   41.4   1.8   74   14-87      6-84  (93)
  9 2ypr_A Protein FEV; transcript  87.9    0.78 2.7E-05   38.3   5.5   73   15-87     10-87  (102)
 10 2jee_A YIIU; FTSZ, septum, coi  86.4     4.9 0.00017   32.3   9.1   53  132-184    23-75  (81)
 11 1fli_A FLI-1; transcription/DN  85.2    0.81 2.8E-05   38.0   4.1   61   14-74      7-68  (98)
 12 1yo5_C SAM pointed domain cont  84.2    0.49 1.7E-05   39.2   2.4   70    6-75      4-76  (97)
 13 3jtg_A ETS-related transcripti  83.5     1.8 6.1E-05   36.2   5.5   72   16-87      8-86  (103)
 14 1gvj_A C-ETS-1 protein, P54; t  81.8    0.94 3.2E-05   40.1   3.3   76   12-87     39-119 (146)
 15 1hbx_G ETS-domain protein ELK-  81.5       1 3.5E-05   40.3   3.5   76   14-89      7-87  (157)
 16 2nny_A C-ETS-1 protein, P54; p  81.4     1.3 4.5E-05   40.1   4.2   76   12-87     64-144 (171)
 17 1deb_A APC protein, adenomatou  81.1     8.2 0.00028   28.6   7.5   45  130-174     4-48  (54)
 18 1pue_E Protein (transcription   72.1       2 6.8E-05   35.0   2.4   67   19-86      8-83  (89)
 19 3tnu_B Keratin, type II cytosk  70.2      28 0.00094   29.3   9.3   54  134-187    34-87  (129)
 20 2lf8_A Transcription factor ET  72.5    0.95 3.2E-05   39.3   0.0   56   18-73     10-67  (128)
 21 3hnw_A Uncharacterized protein  67.3      34  0.0012   29.5   9.4   51  132-182    78-128 (138)
 22 2v66_B Nuclear distribution pr  64.7      55  0.0019   27.5   9.9   53  132-184    38-90  (111)
 23 4dzn_A Coiled-coil peptide CC-  64.6      10 0.00036   25.0   4.2   26  132-157     5-30  (33)
 24 3tnu_A Keratin, type I cytoske  62.5      28 0.00096   29.4   7.9   45  134-178    36-80  (131)
 25 2v66_B Nuclear distribution pr  60.7      72  0.0025   26.8   9.9   46  144-189    36-81  (111)
 26 2v71_A Nuclear distribution pr  59.6      57   0.002   29.8   9.8   54  131-184    90-143 (189)
 27 3hnw_A Uncharacterized protein  56.9      81  0.0028   27.1   9.9   55  130-184    69-123 (138)
 28 3e98_A GAF domain of unknown f  56.9      30   0.001   32.4   7.7   75   85-193    41-115 (252)
 29 2yy0_A C-MYC-binding protein;   56.6      20 0.00069   26.3   5.1   21  133-153    23-43  (53)
 30 1t2k_D Cyclic-AMP-dependent tr  55.1      27 0.00091   25.8   5.7   35  131-165    24-58  (61)
 31 2wt7_A Proto-oncogene protein   54.8      31   0.001   25.7   6.0   33  131-163    25-57  (63)
 32 1wt6_A Myotonin-protein kinase  52.5      57   0.002   26.1   7.5   41  134-174    29-69  (81)
 33 2wt7_B Transcription factor MA  52.1      31   0.001   28.1   6.0   38  137-174    49-86  (90)
 34 2yy0_A C-MYC-binding protein;   49.9      29 0.00097   25.5   5.0   28  137-164    20-47  (53)
 35 3he5_A Synzip1; heterodimeric   48.5      70  0.0024   22.7   6.9   41  133-173     7-47  (49)
 36 3he5_B Synzip2; heterodimeric   48.3      55  0.0019   23.5   6.1   24  132-155     6-29  (52)
 37 1a93_B MAX protein, coiled coi  47.6      25 0.00087   23.9   4.0   16  136-151    14-29  (34)
 38 1jcd_A Major outer membrane li  47.0      65  0.0022   23.7   6.5   44  132-175     7-50  (52)
 39 3q8t_A Beclin-1; autophagy, AT  46.0 1.2E+02   0.004   24.5   9.0   47  131-177     6-52  (96)
 40 1g6u_A Domain swapped dimer; d  45.9      77  0.0026   22.4   6.5   24  152-175    22-45  (48)
 41 3na7_A HP0958; flagellar bioge  45.9 1.2E+02  0.0039   28.1   9.8   48  130-177    91-138 (256)
 42 4dzn_A Coiled-coil peptide CC-  45.4      42  0.0014   22.2   4.6   21  137-157     3-23  (33)
 43 1wt6_A Myotonin-protein kinase  45.4 1.1E+02  0.0038   24.5   8.1   49  131-183    16-64  (81)
 44 1wle_A Seryl-tRNA synthetase;   44.0 1.1E+02  0.0037   31.6  10.0   60  130-189    78-148 (501)
 45 3oja_B Anopheles plasmodium-re  43.9 1.1E+02  0.0037   30.8  10.0   54  132-185   505-565 (597)
 46 2dq0_A Seryl-tRNA synthetase;   40.8      77  0.0026   32.1   8.3   61  130-190    39-102 (455)
 47 1ci6_A Transcription factor AT  38.5      61  0.0021   24.2   5.4   32  131-162    25-56  (63)
 48 3na7_A HP0958; flagellar bioge  37.9 1.2E+02  0.0042   27.9   8.6   16  228-243   226-241 (256)
 49 3oja_B Anopheles plasmodium-re  37.6 1.4E+02  0.0048   30.0   9.7   19  148-166   507-525 (597)
 50 3qne_A Seryl-tRNA synthetase,   37.4      98  0.0033   31.9   8.5   59  130-188    41-102 (485)
 51 4etp_A Kinesin-like protein KA  37.2      99  0.0034   30.8   8.3   51  139-189     6-56  (403)
 52 1jnm_A Proto-oncogene C-JUN; B  36.6      29   0.001   25.7   3.3   32  131-162    24-55  (62)
 53 2xdj_A Uncharacterized protein  36.2 1.6E+02  0.0055   23.3   8.8   32  141-172    25-56  (83)
 54 1kd8_A GABH AIV, GCN4 acid bas  35.1      89   0.003   21.5   5.2   30  132-161     4-33  (36)
 55 3m48_A General control protein  34.8      50  0.0017   22.3   3.9   25  133-157     4-28  (33)
 56 1gd2_E Transcription factor PA  33.2      53  0.0018   25.4   4.4   37  131-167    31-67  (70)
 57 1lwu_C Fibrinogen gamma chain;  33.1 1.2E+02   0.004   29.7   7.9   14  267-280   146-159 (323)
 58 2xu6_A MDV1 coiled coil; prote  32.3      89   0.003   24.5   5.5   48  130-177    22-69  (72)
 59 3t97_C Nuclear pore glycoprote  32.3      26  0.0009   26.7   2.5   42  131-172    14-55  (64)
 60 2w83_C C-JUN-amino-terminal ki  32.3      74  0.0025   25.3   5.1   28  150-177    37-64  (77)
 61 2v71_A Nuclear distribution pr  32.2 2.9E+02  0.0099   25.1   9.9   57  145-201    90-153 (189)
 62 1nkp_B MAX protein, MYC proto-  32.0      54  0.0018   25.3   4.3   31  137-167    48-78  (83)
 63 2dgc_A Protein (GCN4); basic d  31.1      44  0.0015   25.1   3.5   29  131-159    32-60  (63)
 64 1kd8_B GABH BLL, GCN4 acid bas  30.5 1.2E+02   0.004   20.9   5.2   29  132-160     4-32  (36)
 65 2wt7_B Transcription factor MA  30.4      82  0.0028   25.6   5.2   36  132-167    51-86  (90)
 66 2fcw_A Alpha-2-macroglobulin r  30.2 2.4E+02  0.0084   23.6   8.7   29  136-164    24-52  (109)
 67 2xdj_A Uncharacterized protein  30.2   2E+02   0.007   22.7   9.1   43  145-187    22-64  (83)
 68 3oja_A Leucine-rich immune mol  30.0 1.9E+02  0.0065   28.5   9.0   41  137-177   429-469 (487)
 69 1nkp_A C-MYC, MYC proto-oncoge  29.9      78  0.0027   25.1   5.0   34  136-169    52-85  (88)
 70 3u1c_A Tropomyosin alpha-1 cha  29.9   2E+02  0.0069   23.2   7.6   47  131-177    53-99  (101)
 71 3cue_D Transport protein parti  29.8      32  0.0011   31.3   3.0   63   12-75     86-157 (193)
 72 4emc_A Monopolin complex subun  29.7 3.3E+02   0.011   24.9   9.8   42  132-173    23-64  (190)
 73 1ses_A Seryl-tRNA synthetase;   28.4 1.2E+02   0.004   30.4   7.2   59  130-188    36-95  (421)
 74 1go4_E MAD1 (mitotic arrest de  27.4      85  0.0029   25.9   4.9   30  137-166    13-42  (100)
 75 3lss_A Seryl-tRNA synthetase;   27.4 2.2E+02  0.0076   29.2   9.2   59  130-188    45-135 (484)
 76 4e61_A Protein BIM1; EB1-like   27.4 2.7E+02  0.0093   23.2   8.9   52  132-183     7-58  (106)
 77 1joc_A EEA1, early endosomal a  27.1 1.3E+02  0.0045   25.1   6.2   30  147-176     8-37  (125)
 78 4gkw_A Spindle assembly abnorm  26.4 2.2E+02  0.0075   25.0   7.5   37  138-174    48-84  (167)
 79 4e61_A Protein BIM1; EB1-like   26.3 2.7E+02  0.0091   23.2   7.8   36  146-181     7-42  (106)
 80 2dfs_A Myosin-5A; myosin-V, in  25.9 2.4E+02  0.0083   31.7   9.8   39  147-185   988-1026(1080)
 81 3a7p_A Autophagy protein 16; c  25.8 3.5E+02   0.012   23.9   9.9   48  136-183    68-122 (152)
 82 2jee_A YIIU; FTSZ, septum, coi  25.8 2.5E+02  0.0086   22.3   9.6   45  140-184    24-68  (81)
 83 2zqm_A Prefoldin beta subunit   25.7 1.7E+02  0.0058   23.2   6.5   39  137-175    71-109 (117)
 84 3mq7_A Bone marrow stromal ant  25.6 1.2E+02   0.004   25.9   5.6   34  133-166    75-108 (121)
 85 3cve_A Homer protein homolog 1  24.9 2.5E+02  0.0084   21.9   7.5   36  138-173    16-51  (72)
 86 1uo4_A General control protein  24.9 1.1E+02  0.0037   20.8   4.1   26  132-157     4-29  (34)
 87 1ic2_A Tropomyosin alpha chain  24.6 2.4E+02  0.0082   21.6   9.8   48  137-184    14-61  (81)
 88 3kqg_A Langerin, C-type lectin  24.6 1.1E+02  0.0038   25.7   5.5   16  133-148     3-18  (182)
 89 4emc_A Monopolin complex subun  24.4   2E+02  0.0067   26.4   7.2   38  137-174    21-58  (190)
 90 1lwu_C Fibrinogen gamma chain;  24.3 1.9E+02  0.0064   28.3   7.6   34  133-166     9-42  (323)
 91 1l8d_A DNA double-strand break  24.2 1.5E+02  0.0051   23.5   5.9   30  140-169     7-36  (112)
 92 3uux_B Mitochondrial division   24.0   2E+02  0.0067   27.3   7.3   38  164-201   177-214 (242)
 93 4etp_A Kinesin-like protein KA  23.8 2.5E+02  0.0086   27.8   8.6   36  133-168     7-42  (403)
 94 1avy_A Fibritin, gpwac M; bact  23.2 1.1E+02  0.0039   23.9   4.6   38  132-176     4-41  (74)
 95 3ghg_A Fibrinogen alpha chain;  23.2 1.4E+02  0.0047   31.5   6.6   15  177-191   179-193 (562)
 96 3c3g_A Alpha/beta peptide with  23.1 1.2E+02  0.0042   20.4   4.1   25  133-157     4-28  (33)
 97 3efg_A Protein SLYX homolog; x  22.9 1.5E+02  0.0053   23.0   5.5   40  138-177    23-62  (78)
 98 1nlw_A MAD protein, MAX dimeri  22.5   1E+02  0.0035   24.0   4.3   30  137-166    48-77  (80)
 99 3c3f_A Alpha/beta peptide with  22.2 1.3E+02  0.0045   20.4   4.1   26  132-157     4-29  (34)
100 1hjb_A Ccaat/enhancer binding   22.0   2E+02  0.0068   23.0   6.1   26  148-173    41-66  (87)
101 3viq_B Mating-type switching p  22.0 3.1E+02   0.011   22.0   9.0   59  131-190     3-67  (85)
102 2wq1_A General control protein  21.5 1.4E+02  0.0047   20.1   4.1   25  133-157     4-28  (33)
103 3a7p_A Autophagy protein 16; c  21.3 4.3E+02   0.015   23.3   9.7   34  150-183    96-129 (152)
104 2oxj_A Hybrid alpha/beta pepti  20.9 1.4E+02  0.0049   20.2   4.1   26  132-157     4-29  (34)
105 1fmh_A General control protein  20.6 1.7E+02  0.0058   19.2   4.3   26  132-157     4-29  (33)
106 2wvr_A Geminin; DNA replicatio  20.4   3E+02    0.01   25.5   7.6   45  137-192   116-160 (209)
107 3u06_A Protein claret segregat  20.2 3.3E+02   0.011   27.2   8.6   54  130-183     4-57  (412)
108 1fxk_A Prefoldin; archaeal pro  20.2 1.8E+02   0.006   22.8   5.5   38  137-174    66-103 (107)

No 1  
>1hks_A Heat-shock transcription factor; transcription regulation; NMR {Drosophila melanogaster} SCOP: a.4.5.22 PDB: 1hkt_A
Probab=100.00  E-value=2.6e-40  Score=278.45  Aligned_cols=95  Identities=44%  Similarity=0.796  Sum_probs=91.3

Q ss_pred             CCCCcHHHHHHhhccCCCCCCceEEcCCCCeEEEecchhhhhhhccCCcCCCChhhHHhhhcccceeeec----------
Q 016378           10 NSVAPFLNKCYEMVDDESTDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKID----------   79 (390)
Q Consensus        10 ~~~~~Fl~KLy~mVed~~~~~IIsWs~~G~sFVI~d~~~F~~~VLPkyFKhsnfsSFvRQLN~YGFrKv~----------   79 (390)
                      +++|+|+.|||+||+||++++||+|+++|+||||+|+.+|+++|||+||||+||+|||||||+||||||.          
T Consensus         2 ~~~p~F~~KL~~mv~d~~~~~iI~W~~~G~sFvI~d~~~F~~~vLp~yFkh~n~~SFvRQLN~YGF~Kv~~~~~~~~~~~   81 (106)
T 1hks_A            2 SGVPAFLAKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPLNYKHNNMASFIRQLNMYGFHKITSIDNGGLRFD   81 (106)
T ss_dssp             TTCCTTHHHHHHHHSSSTTTTTSEESTTTSCEECSCCSTTTTTTSTTTTSCCCHHHHHHHHHHHCCCCSSCSSSCCSSCT
T ss_pred             CCcCcHHHHHHHHhcCCCCCCEEEEeCCCCEEEECCHHHHHHHHhHHhcCCCcHHHHHHhhhcCCCeEEecccccCccCC
Confidence            4588999999999999999999999999999999999999999999999999999999999999999984          


Q ss_pred             CCCceeecCCcccCccccccccccc
Q 016378           80 TDRWEFANDGFVRDQKHLLNNICRR  104 (390)
Q Consensus        80 ~d~weF~H~~F~Rg~~~LL~~IkRk  104 (390)
                      ++.|+|+|++|+||+++||.+|+||
T Consensus        82 ~~~~ef~h~~F~Rg~~~LL~~IkRk  106 (106)
T 1hks_A           82 RDEIEFSHPFFKRNSPFLLDQIKRK  106 (106)
T ss_dssp             TSTTEECCTTCCSSCTTSTTTCCCC
T ss_pred             CCceEEECcCccCcCHHHHhhCcCC
Confidence            4789999999999999999999997


No 2  
>2ldu_A Heat shock factor protein 1; structural genomics, northeast structural genomics consortiu DNA-binding, PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=100.00  E-value=1.4e-39  Score=281.90  Aligned_cols=104  Identities=44%  Similarity=0.824  Sum_probs=98.0

Q ss_pred             cCCCCCCCCCcHHHHHHhhccCCCCCCceEEcCCCCeEEEecchhhhhhhccCCcCCCChhhHHhhhcccceeeec----
Q 016378            4 SNDDGSNSVAPFLNKCYEMVDDESTDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKID----   79 (390)
Q Consensus         4 s~~~g~~~~~~Fl~KLy~mVed~~~~~IIsWs~~G~sFVI~d~~~F~~~VLPkyFKhsnfsSFvRQLN~YGFrKv~----   79 (390)
                      |-..+...+++||.|||+||+||++++||+|+++|++|||+|+.+|+++|||+||||+||+|||||||+|||+||.    
T Consensus         9 ~~~~~~~~~~~F~~KL~~ml~d~~~~~iI~W~~~G~sFvV~d~~~F~~~vLp~yFkh~nfsSFvRQLN~YGF~Kv~~~~~   88 (125)
T 2ldu_A            9 SHMAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQ   88 (125)
T ss_dssp             SSCCSSCCCCHHHHHHHHHHHCTTTTTTEEECTTSSEEEECCHHHHHHHHHHHHSSCCCHHHHHHHHHHTTCEEEECSCC
T ss_pred             cccccCCCCCcHHHHHHHHhhCCCCCCEEEEcCCCCEEEEeCHHHHHHHHhHHhcCCCcHHHHHHHhcccCceEEeeccc
Confidence            4556777899999999999999999999999999999999999999999999999999999999999999999994    


Q ss_pred             -------CCCceeecCCcccCcccccccccccCCC
Q 016378           80 -------TDRWEFANDGFVRDQKHLLNNICRRKNT  107 (390)
Q Consensus        80 -------~d~weF~H~~F~Rg~~~LL~~IkRkk~~  107 (390)
                             ++.|+|+|++|+||+++||.+|+||++.
T Consensus        89 ~~~~~~~~~~~eF~H~~F~Rg~~~LL~~IkRk~~~  123 (125)
T 2ldu_A           89 GGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVTS  123 (125)
T ss_dssp             SSSSSCSSCCEEEECTTCBTTBGGGTTTSCCCTTS
T ss_pred             cccccCCCCccEEECccccCCCHHHHhhCcCCCCC
Confidence                   4689999999999999999999999864


No 3  
>3hts_B Heat shock transcription factor; transcription regulation, DNA-binding protein, complex (WING helix_TURN_ helix-DNA); 1.75A {Kluyveromyces lactis} SCOP: a.4.5.22 PDB: 2hts_A 1fyk_A* 1fym_A 1fyl_A 3hsf_A 1fbu_A 1fbs_A 1fbq_A
Probab=99.98  E-value=1e-33  Score=237.91  Aligned_cols=86  Identities=45%  Similarity=0.875  Sum_probs=77.8

Q ss_pred             cCCCCCCCCCcHHHHHHhhccCCCCCCceEEcCCCCeEEEecchhhhhhhccCCcCCCChhhHHhhhcccceeeec----
Q 016378            4 SNDDGSNSVAPFLNKCYEMVDDESTDSIISWGQSNESFVIWDVTEFSVQLLPRYFKHSNFSSFIRQLNIYGFRKID----   79 (390)
Q Consensus         4 s~~~g~~~~~~Fl~KLy~mVed~~~~~IIsWs~~G~sFVI~d~~~F~~~VLPkyFKhsnfsSFvRQLN~YGFrKv~----   79 (390)
                      +...|+..+|+|+.|||.||+||++++||+|+++|++|||+|+.+|+++|||+||||+||+||+||||+||||||.    
T Consensus         4 ~~s~~~~~~p~F~~KL~~ml~d~~~~~iI~W~~~G~sfiI~d~~~F~~~VLp~yFkh~nfsSFvRQLN~YGF~Kv~~~~~   83 (102)
T 3hts_B            4 RASVGSMARPAFVNKLWSMVNDKSNEKFIHWSTSGESIVVPNRERFVQEVLPKYFKHSNFASFVRQLNMYGWHKVQDVKS   83 (102)
T ss_dssp             ------CCSCHHHHHHHHHHHCGGGTTTSEECTTSCSEEESCHHHHHHHTHHHHCSSCCHHHHHHHHHHTTEEECC----
T ss_pred             ccCCCCCCCCcHHHHHHHHhcCCCCCCEEEEeCCCCEEEEcCHHHHHHHHHHHhcCCCcHHHHHHHhhcCCceEeecccc
Confidence            3456677899999999999999999999999999999999999999999999999999999999999999999997    


Q ss_pred             -------CCCceeecCC
Q 016378           80 -------TDRWEFANDG   89 (390)
Q Consensus        80 -------~d~weF~H~~   89 (390)
                             +++|||+|++
T Consensus        84 g~~~~~~~~~wEF~n~~  100 (102)
T 3hts_B           84 GSMLSNNDSRWEFENER  100 (102)
T ss_dssp             -----CCSCCEEEEECC
T ss_pred             CcccCCCcCCeEecCCC
Confidence                   6799999986


No 4  
>2dao_A Transcription factor ETV6; ETS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.20  E-value=0.41  Score=41.06  Aligned_cols=79  Identities=19%  Similarity=0.311  Sum_probs=58.3

Q ss_pred             CCCCCcHHHHHHhhccCCCCCCceEEcC-CCCeEEEecchhhhhhhcc-CCcCCCChhhHHhhhccc---ce-eeecCCC
Q 016378            9 SNSVAPFLNKCYEMVDDESTDSIISWGQ-SNESFVIWDVTEFSVQLLP-RYFKHSNFSSFIRQLNIY---GF-RKIDTDR   82 (390)
Q Consensus         9 ~~~~~~Fl~KLy~mVed~~~~~IIsWs~-~G~sFVI~d~~~F~~~VLP-kyFKhsnfsSFvRQLN~Y---GF-rKv~~d~   82 (390)
                      ..+....-.=|.++|.|+++.++|+|.. ++.-|.+.|+++.++.-=. +.=..-||...-|-|..|   |. +||...+
T Consensus         5 ~~g~~~LwqFLleLL~d~~~~~~I~W~~~~~g~Fklvdp~~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~G~r   84 (118)
T 2dao_A            5 SSGCRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHYYKLNIIRKEPGQR   84 (118)
T ss_dssp             CCCCCCHHHHHHHHHHCGGGTTTEEEEEGGGTEEEESCHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHTSEECCSSSS
T ss_pred             cCcchHHHHHHHHHhCCcccCCceEeeCCCCCeEEEeCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCCEEeccCCe
Confidence            3445556667788999999999999988 4568999999988774222 333567899999999988   33 6666666


Q ss_pred             ceeec
Q 016378           83 WEFAN   87 (390)
Q Consensus        83 weF~H   87 (390)
                      ..|..
T Consensus        85 ~vY~F   89 (118)
T 2dao_A           85 LLFRF   89 (118)
T ss_dssp             SEEEE
T ss_pred             EEEEe
Confidence            66654


No 5  
>1awc_A Protein (GA binding protein alpha); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: a.4.5.21
Probab=89.14  E-value=0.45  Score=40.31  Aligned_cols=69  Identities=17%  Similarity=0.249  Sum_probs=50.8

Q ss_pred             HHhhccCCCCCCceEEcCCCCeEEEecchhhhhhhcc-CCcCCCChhhHHhhhcccce----eeecCCCceeec
Q 016378           19 CYEMVDDESTDSIISWGQSNESFVIWDVTEFSVQLLP-RYFKHSNFSSFIRQLNIYGF----RKIDTDRWEFAN   87 (390)
Q Consensus        19 Ly~mVed~~~~~IIsWs~~G~sFVI~d~~~F~~~VLP-kyFKhsnfsSFvRQLN~YGF----rKv~~d~weF~H   87 (390)
                      |.++|.|+++.++|+|...+.-|.+.|+++.++.-=. +.=..-||...-|-|..|.=    +||...+..|..
T Consensus         7 LleLL~d~~~~~~I~W~~~~geFkl~d~e~VArlWG~rKnkp~MnYeKlSRaLRyYY~k~ii~Kv~GkrlvY~F   80 (110)
T 1awc_A            7 LLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKF   80 (110)
T ss_dssp             HHHHHTCTTTTTTSEECSSSSEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGGGGSSSEEECTTSTTEEEE
T ss_pred             HHHHhcCcccCCceEEeCCCCEEEecCHHHHHHHHHHccCCCCCCHHHHHHHHHHHHhcCCEeeccCCeeEEec
Confidence            5788999999999999999999999999888764222 22245678889998888742    445544555543


No 6  
>4avp_A ETS translocation variant 1; transcription, transcriptional activation and repression, DN binding protein, E twenty-SIX, erwing sarcoma; 1.82A {Homo sapiens} PDB: 4b06_A
Probab=88.99  E-value=0.45  Score=40.04  Aligned_cols=74  Identities=19%  Similarity=0.358  Sum_probs=55.8

Q ss_pred             cHHHHHHhhccCCCCCCceEEcCCCCeEEEecchhhhhhhcc-CCcCCCChhhHHhhhccc---ce-eeecCCCceeec
Q 016378           14 PFLNKCYEMVDDESTDSIISWGQSNESFVIWDVTEFSVQLLP-RYFKHSNFSSFIRQLNIY---GF-RKIDTDRWEFAN   87 (390)
Q Consensus        14 ~Fl~KLy~mVed~~~~~IIsWs~~G~sFVI~d~~~F~~~VLP-kyFKhsnfsSFvRQLN~Y---GF-rKv~~d~weF~H   87 (390)
                      ....=|.++|+|+++.++|+|...+..|.+.|+++.++.--. +.=..-||..+.|-|..|   |. +||...+.+|..
T Consensus        13 ~LwqFL~~LL~d~~~~~~I~W~~~~~~Fkl~dp~~VA~lWG~rKnkp~M~YeKlSRaLRyYY~kgii~Kv~G~r~vYkF   91 (106)
T 4avp_A           13 QLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKF   91 (106)
T ss_dssp             CHHHHHHHHHHCGGGTTTEEECSSTTEEEESSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHTSEEECTTCSSEEEE
T ss_pred             eHHHHHHHHHcCccCCCCCcccCCCceEEecCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCeEEecCCCeEEEEe
Confidence            344456788999999999999998889999999988863221 223567899999999887   33 677766666653


No 7  
>1wwx_A E74-like factor 5 ESE-2B; DNA binding, transcriptional activation and repression, structural genomics; NMR {Homo sapiens} SCOP: a.4.5.21
Probab=88.36  E-value=0.43  Score=40.25  Aligned_cols=81  Identities=12%  Similarity=0.247  Sum_probs=58.1

Q ss_pred             CCCCCCCCcHHHHHHhhccCCC-CCCceEEcC-CCCeEEEecchhhhhhhcc-CCcCCCChhhHHhhhcccc----eeee
Q 016378            6 DDGSNSVAPFLNKCYEMVDDES-TDSIISWGQ-SNESFVIWDVTEFSVQLLP-RYFKHSNFSSFIRQLNIYG----FRKI   78 (390)
Q Consensus         6 ~~g~~~~~~Fl~KLy~mVed~~-~~~IIsWs~-~G~sFVI~d~~~F~~~VLP-kyFKhsnfsSFvRQLN~YG----FrKv   78 (390)
                      ++|+++......=|.++|.||+ ..++|+|.. +..-|.+.|+++.++.-=. +.=..-||...-|-|..|.    -+||
T Consensus         2 ~sg~~g~i~LwqFL~eLL~d~~~~~~~I~W~~~~~g~Fkl~d~e~VArlWG~rKnkp~MnYeKlSRaLRyYY~~~ii~Kv   81 (107)
T 1wwx_A            2 SSGSSGSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYYKTGILERV   81 (107)
T ss_dssp             CCCCCSSCCHHHHHHHHHHCTTTCCSCCEEEETTTTEEECSCHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHTSEECC
T ss_pred             CCCCCCcEEHHHHHHHHHcCcccCCCcEEeecCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHhcCcEEec
Confidence            4556667777788899999986 568999987 4679999999888874211 1224688999999998884    2556


Q ss_pred             cCCCceeec
Q 016378           79 DTDRWEFAN   87 (390)
Q Consensus        79 ~~d~weF~H   87 (390)
                      . .+.+|..
T Consensus        82 ~-~rlvY~F   89 (107)
T 1wwx_A           82 D-RRLVYKF   89 (107)
T ss_dssp             S-SSSEEEE
T ss_pred             c-ceEEEEe
Confidence            4 4555543


No 8  
>1bc8_C SAP-1, protein (SAP-1 ETS domain); DNA-binding domain, winged helix-turn-helix, DNA-binding specificity, transcription/DNA complex; HET: DNA; 1.93A {Homo sapiens} SCOP: a.4.5.21 PDB: 1bc7_C* 1k6o_A 1dux_C*
Probab=88.02  E-value=0.19  Score=41.42  Aligned_cols=74  Identities=12%  Similarity=0.301  Sum_probs=55.7

Q ss_pred             cHHHHHHhhccCCCCCCceEEcCCCCeEEEecchhhhhhhcc-CCcCCCChhhHHhhhcccc---e-eeecCCCceeec
Q 016378           14 PFLNKCYEMVDDESTDSIISWGQSNESFVIWDVTEFSVQLLP-RYFKHSNFSSFIRQLNIYG---F-RKIDTDRWEFAN   87 (390)
Q Consensus        14 ~Fl~KLy~mVed~~~~~IIsWs~~G~sFVI~d~~~F~~~VLP-kyFKhsnfsSFvRQLN~YG---F-rKv~~d~weF~H   87 (390)
                      ....=|.++|.|++..++|+|...+.-|.+.|+++.++.-=. +.=..-||...-|-|..|-   . +||...+..|..
T Consensus         6 ~Lw~FL~~LL~d~~~~~~I~W~~~~g~Fkl~d~~~VArlWG~rKnk~~MnYeklSRaLRyYY~~~il~Kv~g~r~vY~F   84 (93)
T 1bc8_C            6 TLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYKF   84 (93)
T ss_dssp             CHHHHHHHHTTCGGGTTTSEECSSSSEEECTTHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHTSEEECTTSTTEEEE
T ss_pred             cHHHHHHHHhcCcccCCceEEeCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHhcCcEEecCCCeEEEEe
Confidence            344456789999999999999998889999999988874222 2235678999999998874   3 566656666654


No 9  
>2ypr_A Protein FEV; transcription; 2.64A {Homo sapiens} PDB: 1fli_A
Probab=87.93  E-value=0.78  Score=38.31  Aligned_cols=73  Identities=18%  Similarity=0.325  Sum_probs=54.2

Q ss_pred             HHHHHHhhccCCCCCCceEEcCCCCeEEEecchhhhhhhcc-CCcCCCChhhHHhhhcccc---e-eeecCCCceeec
Q 016378           15 FLNKCYEMVDDESTDSIISWGQSNESFVIWDVTEFSVQLLP-RYFKHSNFSSFIRQLNIYG---F-RKIDTDRWEFAN   87 (390)
Q Consensus        15 Fl~KLy~mVed~~~~~IIsWs~~G~sFVI~d~~~F~~~VLP-kyFKhsnfsSFvRQLN~YG---F-rKv~~d~weF~H   87 (390)
                      ...=|.++|+|+++.++|+|...+.-|.+.|+++.++.--. +.=..-||.-+.|-|..|-   . +||...+..|..
T Consensus        10 LwqFLl~LL~d~~~~~~I~W~~~~g~Fkl~dp~~VArlWG~rKnkp~MnYeKlSRaLRyYY~k~ii~Kv~Gkr~vYkF   87 (102)
T 2ypr_A           10 LWQFLLELLADRANAGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRYAYRF   87 (102)
T ss_dssp             HHHHHHHHHTCGGGTTTCEECSSTTEEECSSHHHHHHHHHHHTTCTTCCHHHHHHHHTHHHHTTSEEECSSCSSEEEE
T ss_pred             HHHHHHHHhcCCCCCCcccccCCCceEEecChHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCcEEecCCCeEEEEe
Confidence            44556788999999999999998999999999988863211 2225678999999998873   3 666655655543


No 10 
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=86.36  E-value=4.9  Score=32.29  Aligned_cols=53  Identities=26%  Similarity=0.391  Sum_probs=35.6

Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          132 SALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQML  184 (390)
Q Consensus       132 ~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mEq~QqQMl  184 (390)
                      .-|.-||+.||.++..|.++...++...+.+..+...|++....-..+.+.++
T Consensus        23 ~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~LL   75 (81)
T 2jee_A           23 TLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALL   75 (81)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44566899999999999998888666655566666555555555444444443


No 11 
>1fli_A FLI-1; transcription/DNA; NMR {Homo sapiens} SCOP: a.4.5.21
Probab=85.19  E-value=0.81  Score=38.03  Aligned_cols=61  Identities=21%  Similarity=0.328  Sum_probs=46.6

Q ss_pred             cHHHHHHhhccCCCCCCceEEcCCCCeEEEecchhhhhhhcc-CCcCCCChhhHHhhhcccc
Q 016378           14 PFLNKCYEMVDDESTDSIISWGQSNESFVIWDVTEFSVQLLP-RYFKHSNFSSFIRQLNIYG   74 (390)
Q Consensus        14 ~Fl~KLy~mVed~~~~~IIsWs~~G~sFVI~d~~~F~~~VLP-kyFKhsnfsSFvRQLN~YG   74 (390)
                      ....=|.++|+|+++.++|+|...+.-|.+.|+++.++.-=. +.=..-||...-|-|..|-
T Consensus         7 ~LwqFL~~LL~d~~~~~~I~W~~~~g~Fklvd~e~VArlWG~rK~kp~MnYeklSRaLRyYY   68 (98)
T 1fli_A            7 QLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYY   68 (98)
T ss_dssp             CSHHHHHHHHHTCSSCSSEECTTSSSSCEECCHHHHHHHHHHHTCCTTCSSHHHHHHHHHHH
T ss_pred             eHHHHHHHHhcCcccCCCeEEeCCCCEEEEcCHHHHHHHHHhccCCCCcCHHHHHHHHHHHH
Confidence            344446677899999999999999999999999888763221 2225678889999888874


No 12 
>1yo5_C SAM pointed domain containing ETS transcription factor; protein-DNA complex, double helix, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.4.5.21
Probab=84.24  E-value=0.49  Score=39.25  Aligned_cols=70  Identities=14%  Similarity=0.103  Sum_probs=49.8

Q ss_pred             CCCCCCCCcHHHHHHhhccCCC-CCCceEEcC-CCCeEEEecchhhhhhhcc-CCcCCCChhhHHhhhcccce
Q 016378            6 DDGSNSVAPFLNKCYEMVDDES-TDSIISWGQ-SNESFVIWDVTEFSVQLLP-RYFKHSNFSSFIRQLNIYGF   75 (390)
Q Consensus         6 ~~g~~~~~~Fl~KLy~mVed~~-~~~IIsWs~-~G~sFVI~d~~~F~~~VLP-kyFKhsnfsSFvRQLN~YGF   75 (390)
                      +.|+++......=|.++|.||+ ..++|+|.. ++.-|.+.|+++.++.-=. +.=..-||...-|-|..|--
T Consensus         4 ~~~~~~~i~LwqFL~eLL~d~~~~~~~I~W~~~~~g~Fkl~d~~~VArlWG~rKnkp~MnYeklSRaLRyYY~   76 (97)
T 1yo5_C            4 DALGSQPIHLWQFLKELLLKPHSYGRFIRWLNKEKGIFKIEDSAQVARLWGIRKNRPAMNYDKLSRSIRQYYK   76 (97)
T ss_dssp             -----CCCCHHHHHHHHHHCHHHHTTTEEEEETTTTEEEESCHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTT
T ss_pred             CCCCCCeeEHHHHHHHHhcCcccCCCceEeecCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHh
Confidence            3444556667777889999986 479999985 6789999999988874221 23346789999999988853


No 13 
>3jtg_A ETS-related transcription factor ELF-3; ELF3, protein-DNA complex, type II TGF-beta receptor, activa alternative splicing, cytoplasm; HET: DNA; 2.20A {Mus musculus} SCOP: a.4.5.21
Probab=83.50  E-value=1.8  Score=36.19  Aligned_cols=72  Identities=8%  Similarity=0.209  Sum_probs=50.4

Q ss_pred             HHHHHhhccCCC-CCCceEEcCC-CCeEEEecchhhhhhhcc-CCcCCCChhhHHhhhcccc---e-eeecCCCceeec
Q 016378           16 LNKCYEMVDDES-TDSIISWGQS-NESFVIWDVTEFSVQLLP-RYFKHSNFSSFIRQLNIYG---F-RKIDTDRWEFAN   87 (390)
Q Consensus        16 l~KLy~mVed~~-~~~IIsWs~~-G~sFVI~d~~~F~~~VLP-kyFKhsnfsSFvRQLN~YG---F-rKv~~d~weF~H   87 (390)
                      ..=|.++|.|++ ..++|+|... ..-|.+.||++.++.--. +.=..-||..+.|-|..|-   . +||...+.+|..
T Consensus         8 wqFL~~LL~d~~~~~~~I~W~~~~~g~Fkl~dp~~VArlWG~rKnkp~MnYeKlSRaLRyYy~~~ii~Kv~G~r~vY~F   86 (103)
T 3jtg_A            8 WEFIRDILIHPELNEGLMKWENRHEGVFKFLRSEAVAQLWGQKKKNSNMTYEKLSRAMRYYYKREILERVDGRRLVYKF   86 (103)
T ss_dssp             HHHHHHHHTCGGGCSSCEEEEETTTTEEEESSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHTTSBCCCTTCTTEEEB
T ss_pred             HHHHHHHHcCcccCCCccccccCCCceEEecCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCcEEecCCceEEEEe
Confidence            344567889987 5689999984 569999999988864111 1125788999999998873   2 556555555543


No 14 
>1gvj_A C-ETS-1 protein, P54; transcription, autoinhibition, ETS domain; 1.53A {Homo sapiens} SCOP: a.4.5.21 PDB: 1md0_A 1r36_A 1k78_B 1k79_A* 1k7a_A* 2stt_A* 2stw_A*
Probab=81.84  E-value=0.94  Score=40.13  Aligned_cols=76  Identities=21%  Similarity=0.260  Sum_probs=57.5

Q ss_pred             CCcHHHHHHhhccCCCCCCceEEcCCCCeEEEecchhhhhhhcc-CCcCCCChhhHHhhhcccce----eeecCCCceee
Q 016378           12 VAPFLNKCYEMVDDESTDSIISWGQSNESFVIWDVTEFSVQLLP-RYFKHSNFSSFIRQLNIYGF----RKIDTDRWEFA   86 (390)
Q Consensus        12 ~~~Fl~KLy~mVed~~~~~IIsWs~~G~sFVI~d~~~F~~~VLP-kyFKhsnfsSFvRQLN~YGF----rKv~~d~weF~   86 (390)
                      ......=|.++|.|++..++|+|...+.-|.+.|+++.++.-=. +.=..-||...-|-|..|-=    +||...+..|.
T Consensus        39 ~i~LwqFLleLL~d~~~~~~I~Wt~~~~eFklvdpe~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~GkrlvY~  118 (146)
T 1gvj_A           39 PIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYR  118 (146)
T ss_dssp             SCCHHHHHHHHHTCGGGTTTSEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHTTSEEECTTSSSEEE
T ss_pred             ceeHHHHHHHHhcCcccCCceEeeCCCCEEEeCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCcEEecCCCeEEEE
Confidence            45566667888999999999999999999999999998874222 22246789999999988743    46666666666


Q ss_pred             c
Q 016378           87 N   87 (390)
Q Consensus        87 H   87 (390)
                      .
T Consensus       119 F  119 (146)
T 1gvj_A          119 F  119 (146)
T ss_dssp             E
T ss_pred             e
Confidence            4


No 15 
>1hbx_G ETS-domain protein ELK-4; gene regulation, transcription complex; 3.15A {Homo sapiens} SCOP: a.4.5.21
Probab=81.51  E-value=1  Score=40.29  Aligned_cols=76  Identities=12%  Similarity=0.282  Sum_probs=57.0

Q ss_pred             cHHHHHHhhccCCCCCCceEEcCCCCeEEEecchhhhhhhcc-CCcCCCChhhHHhhhcccc---e-eeecCCCceeecC
Q 016378           14 PFLNKCYEMVDDESTDSIISWGQSNESFVIWDVTEFSVQLLP-RYFKHSNFSSFIRQLNIYG---F-RKIDTDRWEFAND   88 (390)
Q Consensus        14 ~Fl~KLy~mVed~~~~~IIsWs~~G~sFVI~d~~~F~~~VLP-kyFKhsnfsSFvRQLN~YG---F-rKv~~d~weF~H~   88 (390)
                      ....=|.++|.|++..++|+|...+.-|.+.|+++.++.-=. +.=..-||...-|-|..|-   + +||...+..|..-
T Consensus         7 ~LWqFLleLL~d~~~~~~I~Wt~~~geFklvdpe~VArLWG~rKnkp~MnYeKLSRALRyYY~k~Ii~KV~GqrlvYkF~   86 (157)
T 1hbx_G            7 TLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYKFV   86 (157)
T ss_dssp             CHHHHTTTSSSCGGGTTTEEECSSSSCEEETTHHHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEEECSSCTTEEEES
T ss_pred             cHHHHHHHHhcCcccCCceEEeCCCCEEEecCcHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCcEEecCCCeEEEeeC
Confidence            344456788999999999999998889999999988874222 2335678999999998874   3 5666666676654


Q ss_pred             C
Q 016378           89 G   89 (390)
Q Consensus        89 ~   89 (390)
                      .
T Consensus        87 ~   87 (157)
T 1hbx_G           87 S   87 (157)
T ss_dssp             S
T ss_pred             C
Confidence            3


No 16 
>2nny_A C-ETS-1 protein, P54; protein-DNA complex, transcription/DNA complex; 2.58A {Homo sapiens} PDB: 3ri4_A 3mfk_A 1mdm_B
Probab=81.44  E-value=1.3  Score=40.13  Aligned_cols=76  Identities=21%  Similarity=0.269  Sum_probs=55.7

Q ss_pred             CCcHHHHHHhhccCCCCCCceEEcCCCCeEEEecchhhhhhhcc-CCcCCCChhhHHhhhcccce----eeecCCCceee
Q 016378           12 VAPFLNKCYEMVDDESTDSIISWGQSNESFVIWDVTEFSVQLLP-RYFKHSNFSSFIRQLNIYGF----RKIDTDRWEFA   86 (390)
Q Consensus        12 ~~~Fl~KLy~mVed~~~~~IIsWs~~G~sFVI~d~~~F~~~VLP-kyFKhsnfsSFvRQLN~YGF----rKv~~d~weF~   86 (390)
                      ......=|.++|.|++..++|+|...+.-|.+.|+++.++.-=. +.=..-||...-|-|..|-=    +||...+..|.
T Consensus        64 ~i~LwqFLleLL~d~~~~~~I~Wt~~~~eFklvdpe~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~GkrlvY~  143 (171)
T 2nny_A           64 PIQLWQFLLELLTDKSSQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYR  143 (171)
T ss_dssp             SCCHHHHHHHHHTCTGGGGTCEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGGGTTTSEEECTTSTTEEE
T ss_pred             ceeHHHHHHHHhcCcccCCceEeeCCCCEEEeCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCcEeecCCCeEEEE
Confidence            34455556788999999999999999999999999998874222 22245779999999988753    45655556665


Q ss_pred             c
Q 016378           87 N   87 (390)
Q Consensus        87 H   87 (390)
                      .
T Consensus       144 F  144 (171)
T 2nny_A          144 F  144 (171)
T ss_dssp             E
T ss_pred             e
Confidence            4


No 17 
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=81.06  E-value=8.2  Score=28.58  Aligned_cols=45  Identities=22%  Similarity=0.242  Sum_probs=38.3

Q ss_pred             hhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          130 DHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQ  174 (390)
Q Consensus       130 e~~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq  174 (390)
                      .+..|..+|+.||+++..|.+||..--+|...++++-..|.+-+.
T Consensus         4 sYdQL~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk   48 (54)
T 1deb_A            4 SYDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLK   48 (54)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHH
Confidence            356788999999999999999999988888888888888877654


No 18 
>1pue_E Protein (transcription factor PU.1 (TF PU.1)); complex (transcription regulating/DNA), oncogene, transforming protein, DNA- binding, activator; HET: DNA; 2.10A {Mus musculus} SCOP: a.4.5.21
Probab=72.07  E-value=2  Score=35.02  Aligned_cols=67  Identities=13%  Similarity=0.300  Sum_probs=47.4

Q ss_pred             HHhhccCCCCCCceEEcC-CCCeEEEe--cchhhhhhhcc-C-CcCCCChhhHHhhhcccc----eeeecCCCceee
Q 016378           19 CYEMVDDESTDSIISWGQ-SNESFVIW--DVTEFSVQLLP-R-YFKHSNFSSFIRQLNIYG----FRKIDTDRWEFA   86 (390)
Q Consensus        19 Ly~mVed~~~~~IIsWs~-~G~sFVI~--d~~~F~~~VLP-k-yFKhsnfsSFvRQLN~YG----FrKv~~d~weF~   86 (390)
                      |.++|.|+++.++|+|.. +..-|.+.  |+++.++.-=. + .=..-||...-|-|..|.    -+||. .+..|.
T Consensus         8 L~~LL~d~~~~~~I~W~~~~~g~Fk~~~~~~e~VArlWG~rK~Nk~~MnYeKlSRaLRyYY~~~ii~Kv~-~r~vY~   83 (89)
T 1pue_E            8 LLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYEKMARALRNYGKTGEVKKVK-KKLTYQ   83 (89)
T ss_dssp             HHHHHHHTCCTTTEEEEETTTTEEEECTTTHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHSSEEECS-STTEEE
T ss_pred             HHHHhcCcccCCceEeecCCCcEEEEecCChHHHHHHhhcccCCCCCcCHHHHHHHHHHHHHcCceeecc-ceEEEe
Confidence            578899999999999986 44678775  78787764222 1 233678999999998874    25554 455554


No 19 
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=70.23  E-value=28  Score=29.29  Aligned_cols=54  Identities=15%  Similarity=0.100  Sum_probs=38.0

Q ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          134 LWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFL  187 (390)
Q Consensus       134 L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mEq~QqQMlsFL  187 (390)
                      ...||..|++....|..|+..++.+...++..+..++.|....-..-+..+.-|
T Consensus        34 ~k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~~l~~~q~~i~~l   87 (129)
T 3tnu_B           34 TKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAEL   87 (129)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            346788888888888888888888888888888888777665443333333333


No 20 
>2lf8_A Transcription factor ETV6; auto-inhibition; NMR {Mus musculus}
Probab=72.52  E-value=0.95  Score=39.29  Aligned_cols=56  Identities=18%  Similarity=0.353  Sum_probs=37.6

Q ss_pred             HHHhhccCCCCCCceEEcCC-CCeEEEecchhhhhhhcc-CCcCCCChhhHHhhhccc
Q 016378           18 KCYEMVDDESTDSIISWGQS-NESFVIWDVTEFSVQLLP-RYFKHSNFSSFIRQLNIY   73 (390)
Q Consensus        18 KLy~mVed~~~~~IIsWs~~-G~sFVI~d~~~F~~~VLP-kyFKhsnfsSFvRQLN~Y   73 (390)
                      =|.++|.|+++.++|+|... +.-|.+.|+++.++.-=. +.=..-||...-|-|..|
T Consensus        10 FLleLL~d~~~~~~I~Wt~k~~geFklvdpe~VArlWG~rKnkp~MnYeKLSRALRyY   67 (128)
T 2lf8_A           10 YVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHY   67 (128)
Confidence            35678999999999999884 458999999876652111 111234566666666555


No 21 
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=67.30  E-value=34  Score=29.54  Aligned_cols=51  Identities=18%  Similarity=0.250  Sum_probs=26.2

Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          132 SALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQ  182 (390)
Q Consensus       132 ~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mEq~QqQ  182 (390)
                      ..|..+++.+.++...|..|++.++-+.+.+..++..+++++...+.+-..
T Consensus        78 ~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~  128 (138)
T 3hnw_A           78 DSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVK  128 (138)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344444455555555555555555555555555555555555555444333


No 22 
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=64.67  E-value=55  Score=27.54  Aligned_cols=53  Identities=17%  Similarity=0.164  Sum_probs=29.4

Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          132 SALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQML  184 (390)
Q Consensus       132 ~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mEq~QqQMl  184 (390)
                      +.|.+|+..|+..+..|..-+..|-|.+..++..-......|..+|.+..+.+
T Consensus        38 ~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~ai   90 (111)
T 2v66_B           38 SVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAI   90 (111)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            44555555555555555555555555555555555555555555555555443


No 23 
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=64.59  E-value=10  Score=25.02  Aligned_cols=26  Identities=38%  Similarity=0.432  Sum_probs=14.1

Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHH
Q 016378          132 SALWKEVENLKAGKNALTQELLKLRQ  157 (390)
Q Consensus       132 ~~L~~EVE~LK~dq~~L~qELv~LRQ  157 (390)
                      ..|..||..||++..+|.-|+..|+|
T Consensus         5 aalkqeiaalkkeiaalkfeiaalkq   30 (33)
T 4dzn_A            5 AALKQEIAALKKEIAALKFEIAALKQ   30 (33)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            34455555555555555555555544


No 24 
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=62.49  E-value=28  Score=29.37  Aligned_cols=45  Identities=18%  Similarity=0.077  Sum_probs=27.6

Q ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          134 LWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEK  178 (390)
Q Consensus       134 L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mEq  178 (390)
                      ...||..|++....|..|+..++.+...++..+..++.|....-.
T Consensus        36 ~k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~~l~   80 (131)
T 3tnu_A           36 GKSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCMQLA   80 (131)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence            345667777777777777777777777777777777666654333


No 25 
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=60.68  E-value=72  Score=26.83  Aligned_cols=46  Identities=15%  Similarity=0.187  Sum_probs=37.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          144 GKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVM  189 (390)
Q Consensus       144 dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mEq~QqQMlsFLak  189 (390)
                      .++.|+.|+..|+...+.+...+..|++..+..|+.-.-..+.|..
T Consensus        36 ~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD   81 (111)
T 2v66_B           36 QVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLED   81 (111)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHH
Confidence            3566888899999999999999999999988888777766665543


No 26 
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=59.65  E-value=57  Score=29.79  Aligned_cols=54  Identities=17%  Similarity=0.148  Sum_probs=30.2

Q ss_pred             hhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          131 HSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQML  184 (390)
Q Consensus       131 ~~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mEq~QqQMl  184 (390)
                      .+.|.+|+..|+..+..|...+..|-+.+..++.........+..++.+..+.+
T Consensus        90 ~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R~~~~SleD~e~kln~ai  143 (189)
T 2v71_A           90 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIMSLEDFEQRLNQAI  143 (189)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            344555555555555555555555555555555555555555555555555544


No 27 
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=56.93  E-value=81  Score=27.13  Aligned_cols=55  Identities=13%  Similarity=0.070  Sum_probs=31.3

Q ss_pred             hhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          130 DHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQML  184 (390)
Q Consensus       130 e~~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mEq~QqQMl  184 (390)
                      +...+..+++.|..+...+..|+..|+++...+..++..+.+.+....+.-+.+.
T Consensus        69 El~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~  123 (138)
T 3hnw_A           69 DYFKAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQ  123 (138)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444555566666666666666666666666666666666555555544444443


No 28 
>3e98_A GAF domain of unknown function; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.43A {Pseudomonas aeruginosa}
Probab=56.86  E-value=30  Score=32.39  Aligned_cols=75  Identities=11%  Similarity=0.128  Sum_probs=25.9

Q ss_pred             eecCCcccCcccccccccccCCCCCCcchhhhccccccccchhhhhhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q 016378           85 FANDGFVRDQKHLLNNICRRKNTQGSEQRKSLQQSEKLVEPCEKIDHSALWKEVENLKAGKNALTQELLKLRQYQETADN  164 (390)
Q Consensus        85 F~H~~F~Rg~~~LL~~IkRkk~~~~~~~~k~~~q~~~s~~~~~~~e~~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~  164 (390)
                      =.||.|.-.+++||..++=.-+..            + +.       +-.+.+              +.+||++++.++.
T Consensus        41 ~~~PdFf~~~~~Ll~~L~lph~~~------------~-aV-------SL~erQ--------------~~~LR~r~~~Le~   86 (252)
T 3e98_A           41 SQHPEFFVEHDELIPELRIPHQPG------------D-AV-------SLVERQ--------------VRLLRERNIEMRH   86 (252)
T ss_dssp             ---------------------------------------C-------HHHHHH--------------HHHHHHHHHHHHH
T ss_pred             HhCCHHHhhCHHHHHhCCCCCCCC------------C-cc-------cHHHHH--------------HHHHHHHHHHHHH
Confidence            389999999999998875322110            0 01       111223              3444555555555


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 016378          165 KLLLLRDRVQGMEKSQQQMLSFLVMAMQN  193 (390)
Q Consensus       165 el~~L~eRLq~mEq~QqQMlsFLakamqn  193 (390)
                      ++..|-+.-+.=++.++++..+..+++..
T Consensus        87 ~L~~Li~~A~~Ne~l~~~~~~l~l~LL~a  115 (252)
T 3e98_A           87 RLSQLMDVARENDRLFDKTRRLVLDLLDA  115 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            66666666666666666666666665553


No 29 
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=56.57  E-value=20  Score=26.27  Aligned_cols=21  Identities=24%  Similarity=0.232  Sum_probs=8.2

Q ss_pred             hHHHHHHHHHhhhHHHHHHHH
Q 016378          133 ALWKEVENLKAGKNALTQELL  153 (390)
Q Consensus       133 ~L~~EVE~LK~dq~~L~qELv  153 (390)
                      .|..|++.||.....|.+++.
T Consensus        23 aLk~E~~eLk~k~~~L~~~~~   43 (53)
T 2yy0_A           23 LLRLELAEMKEKYEAIVEENK   43 (53)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            333444444443333333333


No 30 
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=55.08  E-value=27  Score=25.77  Aligned_cols=35  Identities=23%  Similarity=0.196  Sum_probs=23.1

Q ss_pred             hhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Q 016378          131 HSALWKEVENLKAGKNALTQELLKLRQYQETADNK  165 (390)
Q Consensus       131 ~~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~e  165 (390)
                      ...|..+++.|..++..|..++..|+.+...+...
T Consensus        24 ~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~~   58 (61)
T 1t2k_D           24 VQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQL   58 (61)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44566677777777777777777776666555433


No 31 
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=54.75  E-value=31  Score=25.73  Aligned_cols=33  Identities=27%  Similarity=0.371  Sum_probs=22.1

Q ss_pred             hhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q 016378          131 HSALWKEVENLKAGKNALTQELLKLRQYQETAD  163 (390)
Q Consensus       131 ~~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le  163 (390)
                      ...|..+++.|..++..|..++..|+.+...+.
T Consensus        25 ~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk   57 (63)
T 2wt7_A           25 TDTLQAETDQLEDEKSALQTEIANLLKEKEKLE   57 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456677777777777777777776666555443


No 32 
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=52.46  E-value=57  Score=26.13  Aligned_cols=41  Identities=15%  Similarity=0.336  Sum_probs=19.1

Q ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          134 LWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQ  174 (390)
Q Consensus       134 L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq  174 (390)
                      +..|+...|.++..+..+|.....+++.+..++..++.++.
T Consensus        29 i~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~e   69 (81)
T 1wt6_A           29 LSREMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERME   69 (81)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33344444444444444444444444444444444444443


No 33 
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=52.10  E-value=31  Score=28.11  Aligned_cols=38  Identities=16%  Similarity=0.164  Sum_probs=23.1

Q ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          137 EVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQ  174 (390)
Q Consensus       137 EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq  174 (390)
                      ++..|..++..|..|+..|++++..+..++..+.++++
T Consensus        49 q~~~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~   86 (90)
T 2wt7_B           49 QKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSE   86 (90)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44555555556666666666666666666666666664


No 34 
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=49.85  E-value=29  Score=25.46  Aligned_cols=28  Identities=11%  Similarity=0.157  Sum_probs=17.1

Q ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q 016378          137 EVENLKAGKNALTQELLKLRQYQETADN  164 (390)
Q Consensus       137 EVE~LK~dq~~L~qELv~LRQqQe~le~  164 (390)
                      +++.||.++..|.+++..|+++.+.+..
T Consensus        20 d~eaLk~E~~eLk~k~~~L~~~~~el~~   47 (53)
T 2yy0_A           20 EIELLRLELAEMKEKYEAIVEENKKLKA   47 (53)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5777777666666666655555554433


No 35 
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=48.46  E-value=70  Score=22.71  Aligned_cols=41  Identities=20%  Similarity=0.309  Sum_probs=23.5

Q ss_pred             hHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          133 ALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRV  173 (390)
Q Consensus       133 ~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRL  173 (390)
                      .|..||.+|..+...|.+.-..-+.-..-++.++..|+.++
T Consensus         7 qlenevaslenenetlkkknlhkkdliaylekeianlrkki   47 (49)
T 3he5_A            7 QLENEVASLENENETLKKKNLHKKDLIAYLEKEIANLRKKI   47 (49)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcccHHHHHhcccHHHHHHHHHHHHHHHHHHh
Confidence            45556666665555555544444444455666777776655


No 36 
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=48.34  E-value=55  Score=23.53  Aligned_cols=24  Identities=25%  Similarity=0.309  Sum_probs=15.2

Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHH
Q 016378          132 SALWKEVENLKAGKNALTQELLKL  155 (390)
Q Consensus       132 ~~L~~EVE~LK~dq~~L~qELv~L  155 (390)
                      .-|.+.|.+||++.-.|...-+.|
T Consensus         6 aylrkkiarlkkdnlqlerdeqnl   29 (52)
T 3he5_B            6 AYLRKKIARLKKDNLQLERDEQNL   29 (52)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhhhhhhhHhhH
Confidence            346677788887776666544433


No 37 
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=47.61  E-value=25  Score=23.92  Aligned_cols=16  Identities=25%  Similarity=0.530  Sum_probs=7.3

Q ss_pred             HHHHHHHhhhHHHHHH
Q 016378          136 KEVENLKAGKNALTQE  151 (390)
Q Consensus       136 ~EVE~LK~dq~~L~qE  151 (390)
                      .+|+.||+++..|..+
T Consensus        14 qDIddlkrQN~~Le~Q   29 (34)
T 1a93_B           14 QDIDDLKRQNALLEQQ   29 (34)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHH
Confidence            3444444444444443


No 38 
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=47.02  E-value=65  Score=23.65  Aligned_cols=44  Identities=9%  Similarity=0.098  Sum_probs=34.2

Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          132 SALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQG  175 (390)
Q Consensus       132 ~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~  175 (390)
                      ..|..+|..|..+...|..++..++...+....+.....+||..
T Consensus         7 ~~Lss~V~~L~~kVdqLssdV~al~~~v~~ak~eA~RAN~RlDN   50 (52)
T 1jcd_A            7 DQASSDAQTANAKADQASNDANAARSDAQAAKDDAARANQRADN   50 (52)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            35667788888888888888888888888887787777788764


No 39 
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=45.97  E-value=1.2e+02  Score=24.52  Aligned_cols=47  Identities=17%  Similarity=0.293  Sum_probs=33.8

Q ss_pred             hhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          131 HSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGME  177 (390)
Q Consensus       131 ~~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mE  177 (390)
                      ...+..++..|+.+-..|.+||..|..+...+..++..++.-.....
T Consensus         6 ~~~l~~eL~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~~L~   52 (96)
T 3q8t_A            6 SEQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLD   52 (96)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence            35677778888888888888888887777777777777765444433


No 40 
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=45.87  E-value=77  Score=22.42  Aligned_cols=24  Identities=25%  Similarity=0.376  Sum_probs=11.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          152 LLKLRQYQETADNKLLLLRDRVQG  175 (390)
Q Consensus       152 Lv~LRQqQe~le~el~~L~eRLq~  175 (390)
                      +..|..+.+.++.++.++..+++.
T Consensus        22 laaleselqalekklaalksklqa   45 (48)
T 1g6u_A           22 LAALESELQALEKKLAALKSKLQA   45 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444444444555555555555543


No 41 
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=45.85  E-value=1.2e+02  Score=28.07  Aligned_cols=48  Identities=19%  Similarity=0.163  Sum_probs=33.2

Q ss_pred             hhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          130 DHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGME  177 (390)
Q Consensus       130 e~~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mE  177 (390)
                      +...|..||+.+++.+..+..++..+-...+.....+..+..++...+
T Consensus        91 E~~aL~kEie~~~~~i~~lE~eile~~e~ie~~~~~l~~~~~~l~~~~  138 (256)
T 3na7_A           91 ELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELE  138 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            567788888888888888888877776666665555555544444433


No 42 
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=45.41  E-value=42  Score=22.16  Aligned_cols=21  Identities=33%  Similarity=0.431  Sum_probs=12.0

Q ss_pred             HHHHHHhhhHHHHHHHHHHHH
Q 016378          137 EVENLKAGKNALTQELLKLRQ  157 (390)
Q Consensus       137 EVE~LK~dq~~L~qELv~LRQ  157 (390)
                      ||..||.+..+|.+|+..|+=
T Consensus         3 eiaalkqeiaalkkeiaalkf   23 (33)
T 4dzn_A            3 EIAALKQEIAALKKEIAALKF   23 (33)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHH
Confidence            566666666666555555443


No 43 
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=45.39  E-value=1.1e+02  Score=24.47  Aligned_cols=49  Identities=22%  Similarity=0.306  Sum_probs=35.4

Q ss_pred             hhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          131 HSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQM  183 (390)
Q Consensus       131 ~~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mEq~QqQM  183 (390)
                      .+.|..||..    +..++.||.+.|..+..+..++...+.|.+..+...+++
T Consensus        16 QSALeaEIqA----KQ~i~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l   64 (81)
T 1wt6_A           16 QEALEEEVLT----RQSLSREMEAIRTDNQNFASQLREAEARNRDLEAHVRQL   64 (81)
T ss_dssp             HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4566667644    778888898888888888888888777777665444433


No 44 
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=43.97  E-value=1.1e+02  Score=31.64  Aligned_cols=60  Identities=13%  Similarity=0.170  Sum_probs=46.1

Q ss_pred             hhhhHHHHHHHHHhhhHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          130 DHSALWKEVENLKAGKNALTQELLKLRQY-----------QETADNKLLLLRDRVQGMEKSQQQMLSFLVM  189 (390)
Q Consensus       130 e~~~L~~EVE~LK~dq~~L~qELv~LRQq-----------Qe~le~el~~L~eRLq~mEq~QqQMlsFLak  189 (390)
                      ....+..+++.|+.+++.+.+++..++..           .+.+..++..+.+++..+|.....+-.-|..
T Consensus        78 ~~r~~~~~~~~l~~~rn~~sk~i~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~l~~~~~~~~~~l~~  148 (501)
T 1wle_A           78 ELRQLREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQSLRARGREIRKQLTLLYPKEAQLEEQFYL  148 (501)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56778889999999999999999987643           2356677888888888888777776655543


No 45 
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=43.93  E-value=1.1e+02  Score=30.80  Aligned_cols=54  Identities=15%  Similarity=0.148  Sum_probs=27.7

Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHH
Q 016378          132 SALWKEVENLKAGKNALTQELLKLRQYQETAD-------NKLLLLRDRVQGMEKSQQQMLS  185 (390)
Q Consensus       132 ~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le-------~el~~L~eRLq~mEq~QqQMls  185 (390)
                      ..+.+++..++.+.+.+..++.+++++.+...       .++..++++++.+.+++..+-.
T Consensus       505 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~  565 (597)
T 3oja_B          505 DNLNKVFTHLKERQAFKLRETQARRTEADAKQKETEDLEQENIALEKQLDNKRAKQAELRQ  565 (597)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhhcchhhHHhhhHHHHHHHhhhhhHHHHHHH
Confidence            44555566666666666555555554443333       4444555555555444444433


No 46 
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=40.77  E-value=77  Score=32.13  Aligned_cols=61  Identities=16%  Similarity=0.188  Sum_probs=45.0

Q ss_pred             hhhhHHHHHHHHHhhhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          130 DHSALWKEVENLKAGKNALTQELLKLRQY---QETADNKLLLLRDRVQGMEKSQQQMLSFLVMA  190 (390)
Q Consensus       130 e~~~L~~EVE~LK~dq~~L~qELv~LRQq---Qe~le~el~~L~eRLq~mEq~QqQMlsFLaka  190 (390)
                      ....+..+++.|+.+++.+.+++.+++..   .+.+..++..+.+++..+|.....+-.-|..+
T Consensus        39 ~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (455)
T 2dq0_A           39 EWRTKLKEINRLRHERNKIAVEIGKRRKKGEPVDELLAKSREIVKRIGELENEVEELKKKIDYY  102 (455)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56778889999999999999999876432   34566677777788877777777665544443


No 47 
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=38.46  E-value=61  Score=24.17  Aligned_cols=32  Identities=22%  Similarity=0.176  Sum_probs=18.8

Q ss_pred             hhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 016378          131 HSALWKEVENLKAGKNALTQELLKLRQYQETA  162 (390)
Q Consensus       131 ~~~L~~EVE~LK~dq~~L~qELv~LRQqQe~l  162 (390)
                      ...|..+++.|+.++..|..++..|+.+...+
T Consensus        25 ~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~L   56 (63)
T 1ci6_A           25 QEALTGECKELEKKNEALKERADSLAKEIQYL   56 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34556666666666666666666555554443


No 48 
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=37.87  E-value=1.2e+02  Score=27.87  Aligned_cols=16  Identities=0%  Similarity=-0.074  Sum_probs=8.3

Q ss_pred             CCCCceEeeCCCCCCC
Q 016378          228 ASDNMLVRYHPPIDET  243 (390)
Q Consensus       228 ~~~~~iv~yqp~~~~~  243 (390)
                      .+=|.|.-|.+.+.+.
T Consensus       226 p~CgRIL~~~~~~~~~  241 (256)
T 3na7_A          226 PYCGRILYAEGAYESN  241 (256)
T ss_dssp             TTTCCEEECSCC----
T ss_pred             CCCCeeEEeCcchhhc
Confidence            3457777777777663


No 49 
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=37.60  E-value=1.4e+02  Score=29.97  Aligned_cols=19  Identities=16%  Similarity=0.148  Sum_probs=7.0

Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 016378          148 LTQELLKLRQYQETADNKL  166 (390)
Q Consensus       148 L~qELv~LRQqQe~le~el  166 (390)
                      +.+++.++++..+....++
T Consensus       507 l~~~~~~~~~~~~~~~~~~  525 (597)
T 3oja_B          507 LNKVFTHLKERQAFKLRET  525 (597)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhhhhHHHH
Confidence            3333333333333333333


No 50 
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=37.42  E-value=98  Score=31.93  Aligned_cols=59  Identities=10%  Similarity=0.026  Sum_probs=44.3

Q ss_pred             hhhhHHHHHHHHHhhhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          130 DHSALWKEVENLKAGKNALTQELLKLRQY---QETADNKLLLLRDRVQGMEKSQQQMLSFLV  188 (390)
Q Consensus       130 e~~~L~~EVE~LK~dq~~L~qELv~LRQq---Qe~le~el~~L~eRLq~mEq~QqQMlsFLa  188 (390)
                      ....+..+++.|+.+++.+.+++..++..   .+.+..++..+.+++..+|.....+-.-|.
T Consensus        41 ~~r~~~~~~~~l~~~rn~~sk~i~~~k~~~~~~~~l~~~~~~l~~~i~~le~~~~~~~~~~~  102 (485)
T 3qne_A           41 EWVKLRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLR  102 (485)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46778889999999999999999877543   234566777778888887777776655443


No 51 
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=37.19  E-value=99  Score=30.78  Aligned_cols=51  Identities=16%  Similarity=0.147  Sum_probs=25.4

Q ss_pred             HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          139 ENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVM  189 (390)
Q Consensus       139 E~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mEq~QqQMlsFLak  189 (390)
                      +.|+.+...|.++...+.+..+.++.++..+.+++...|..-+++..-+..
T Consensus         6 ~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~e   56 (403)
T 4etp_A            6 AALKEKIAALKEKIAALKEKIKDTELGMKELNEILIKEETVRRTLHNELQE   56 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334444444444444444445555555555666666555544555444443


No 52 
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=36.57  E-value=29  Score=25.66  Aligned_cols=32  Identities=25%  Similarity=0.220  Sum_probs=21.0

Q ss_pred             hhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 016378          131 HSALWKEVENLKAGKNALTQELLKLRQYQETA  162 (390)
Q Consensus       131 ~~~L~~EVE~LK~dq~~L~qELv~LRQqQe~l  162 (390)
                      ...|..+++.|..++..|..++..|+.+...+
T Consensus        24 ~~~Le~~v~~L~~~n~~L~~~v~~L~~e~~~L   55 (62)
T 1jnm_A           24 IARLEEKVKTLKAQNSELASTANMLREQVAQL   55 (62)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34566677777777777777776666655443


No 53 
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=36.22  E-value=1.6e+02  Score=23.31  Aligned_cols=32  Identities=16%  Similarity=0.154  Sum_probs=15.7

Q ss_pred             HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          141 LKAGKNALTQELLKLRQYQETADNKLLLLRDR  172 (390)
Q Consensus       141 LK~dq~~L~qELv~LRQqQe~le~el~~L~eR  172 (390)
                      |......|..|+.+||-+.+...+++..|.+|
T Consensus        25 Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~r   56 (83)
T 2xdj_A           25 LQQQLSDNQSDIDSLRGQIQENQYQLNQVVER   56 (83)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            44444455555555555555555444444433


No 54 
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=35.11  E-value=89  Score=21.46  Aligned_cols=30  Identities=23%  Similarity=0.271  Sum_probs=23.4

Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 016378          132 SALWKEVENLKAGKNALTQELLKLRQYQET  161 (390)
Q Consensus       132 ~~L~~EVE~LK~dq~~L~qELv~LRQqQe~  161 (390)
                      ..|...|+.|-..+..|..|+.+|+.-...
T Consensus         4 nQLE~kVEeLl~~~~~Le~EV~RL~~ll~~   33 (36)
T 1kd8_A            4 KQLEAEVEEIESEVWHLENEVARLEKENAE   33 (36)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhhHHHHHHHHHHHHHhcc
Confidence            467788888888888888888888765543


No 55 
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=34.83  E-value=50  Score=22.30  Aligned_cols=25  Identities=28%  Similarity=0.358  Sum_probs=20.1

Q ss_pred             hHHHHHHHHHhhhHHHHHHHHHHHH
Q 016378          133 ALWKEVENLKAGKNALTQELLKLRQ  157 (390)
Q Consensus       133 ~L~~EVE~LK~dq~~L~qELv~LRQ  157 (390)
                      .|+..|+.|-.++..|..|+.+|+.
T Consensus         4 QLE~kVEeLl~~n~~Le~EV~RLk~   28 (33)
T 3m48_A            4 QLEAKVEELLSKNWNLENEVARLKK   28 (33)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            5677788888888888888888764


No 56 
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=33.24  E-value=53  Score=25.40  Aligned_cols=37  Identities=30%  Similarity=0.189  Sum_probs=22.0

Q ss_pred             hhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q 016378          131 HSALWKEVENLKAGKNALTQELLKLRQYQETADNKLL  167 (390)
Q Consensus       131 ~~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~  167 (390)
                      ...|..+|..|......|..|...|+.+...+..++.
T Consensus        31 i~~LE~~v~~le~~~~~l~~en~~Lr~~i~~L~~El~   67 (70)
T 1gd2_E           31 LKALETQVVTLKELHSSTTLENDQLRQKVRQLEEELR   67 (70)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3455666666666666666666666666655555543


No 57 
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=33.12  E-value=1.2e+02  Score=29.74  Aligned_cols=14  Identities=7%  Similarity=0.380  Sum_probs=8.0

Q ss_pred             cccccCHHHHHHHh
Q 016378          267 KDVFMNIDFLKMLM  280 (390)
Q Consensus       267 ~d~~~~~~~~~~~~  280 (390)
                      ++|++-=|-|-.|-
T Consensus       146 gEfWLGle~ih~LT  159 (323)
T 1lwu_C          146 TEFWLGNEKIHLLT  159 (323)
T ss_dssp             SCEECCHHHHHHHH
T ss_pred             ccEEecccceeccc
Confidence            45555556666555


No 58 
>2xu6_A MDV1 coiled coil; protein binding, mitochondrial outer membrane, adapter prote organelle division; 2.70A {Saccharomyces cerevisiae}
Probab=32.34  E-value=89  Score=24.52  Aligned_cols=48  Identities=27%  Similarity=0.349  Sum_probs=33.8

Q ss_pred             hhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          130 DHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGME  177 (390)
Q Consensus       130 e~~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mE  177 (390)
                      +...+...|++|+.-+..+..-+..+.|+.-.+++.+..+..|+..++
T Consensus        22 EI~EID~Ki~nL~~mR~ivldRlA~lEqdE~~LE~~l~~i~~rle~~q   69 (72)
T 2xu6_A           22 EIRDIEVEVENLRQKKEKLLGKIANIEQNQLMLEDNLKQIDDRLDFLE   69 (72)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence            456677778888888888888888888888888888888888876554


No 59 
>3t97_C Nuclear pore glycoprotein P62; nucleoporin, coiled-coil, nuclear pore complex, central TRAN channel, alpha helical proteins, triple helix; 2.80A {Rattus norvegicus}
Probab=32.27  E-value=26  Score=26.72  Aligned_cols=42  Identities=29%  Similarity=0.329  Sum_probs=29.3

Q ss_pred             hhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          131 HSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDR  172 (390)
Q Consensus       131 ~~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eR  172 (390)
                      ...|..++...+.+++.|.++|.-...+|..++.-+..+++.
T Consensus        14 I~~L~~~v~~~e~~Q~~ldq~Ld~Ie~QQ~ELe~~L~~~E~~   55 (64)
T 3t97_C           14 ITSLHREVEKVKLDQKRLDQELDFILSQQKELEDLLSPLEES   55 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTTTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456777888888888888888877777777665555444433


No 60 
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=32.26  E-value=74  Score=25.27  Aligned_cols=28  Identities=11%  Similarity=0.133  Sum_probs=11.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          150 QELLKLRQYQETADNKLLLLRDRVQGME  177 (390)
Q Consensus       150 qELv~LRQqQe~le~el~~L~eRLq~mE  177 (390)
                      ..+-.|-.+++.+..++.++++-...++
T Consensus        37 ~rvdELt~E~e~l~~El~s~~~~~~r~~   64 (77)
T 2w83_C           37 AKVDELTCEKDVLQGELEAVKQAKLKLE   64 (77)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            3333444444444444444443333333


No 61 
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=32.20  E-value=2.9e+02  Score=25.09  Aligned_cols=57  Identities=19%  Similarity=0.274  Sum_probs=32.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHhcCchhhhhhc
Q 016378          145 KNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQML-------SFLVMAMQNPSFLVQLL  201 (390)
Q Consensus       145 q~~L~qELv~LRQqQe~le~el~~L~eRLq~mEq~QqQMl-------sFLakamqnP~fl~ql~  201 (390)
                      .+.|..|+..|+.....+..++..|.+....+|+.-....       +.|-.|+-...||..=+
T Consensus        90 ~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R~~~~SleD~e~kln~aiEr~alLE~El  153 (189)
T 2v71_A           90 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESEL  153 (189)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            5555666666666666666666666666666665555444       34445555555554444


No 62 
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=31.98  E-value=54  Score=25.32  Aligned_cols=31  Identities=6%  Similarity=0.207  Sum_probs=19.4

Q ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q 016378          137 EVENLKAGKNALTQELLKLRQYQETADNKLL  167 (390)
Q Consensus       137 EVE~LK~dq~~L~qELv~LRQqQe~le~el~  167 (390)
                      .|..|+.....|..|+..|++++..+..++.
T Consensus        48 YI~~L~~~~~~l~~e~~~L~~~~~~L~~~l~   78 (83)
T 1nkp_B           48 YIQYMRRKNHTHQQDIDDLKRQNALLEQQVR   78 (83)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4666666666666666666666665555443


No 63 
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=31.09  E-value=44  Score=25.12  Aligned_cols=29  Identities=24%  Similarity=0.307  Sum_probs=19.5

Q ss_pred             hhhHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 016378          131 HSALWKEVENLKAGKNALTQELLKLRQYQ  159 (390)
Q Consensus       131 ~~~L~~EVE~LK~dq~~L~qELv~LRQqQ  159 (390)
                      ...|..+|+.|+.++..|..|+..|+++.
T Consensus        32 ~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l   60 (63)
T 2dgc_A           32 MKQLEDKVEELLSKNYHLENEVARLKKLV   60 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35666777777777777777777766543


No 64 
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=30.52  E-value=1.2e+02  Score=20.86  Aligned_cols=29  Identities=24%  Similarity=0.299  Sum_probs=22.4

Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 016378          132 SALWKEVENLKAGKNALTQELLKLRQYQE  160 (390)
Q Consensus       132 ~~L~~EVE~LK~dq~~L~qELv~LRQqQe  160 (390)
                      ..|..-|+.|...+..|..|+.+||.-..
T Consensus         4 nQLE~KVEeLl~~~~~Le~eV~RLk~ll~   32 (36)
T 1kd8_B            4 KQLKAKVEELKSKLWHLKNKVARLKKKNA   32 (36)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence            35777788888888888888888876443


No 65 
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=30.39  E-value=82  Score=25.58  Aligned_cols=36  Identities=22%  Similarity=0.149  Sum_probs=17.9

Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q 016378          132 SALWKEVENLKAGKNALTQELLKLRQYQETADNKLL  167 (390)
Q Consensus       132 ~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~  167 (390)
                      ..|+.++..|..+...|..|+.++.++...+..++.
T Consensus        51 ~~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~   86 (90)
T 2wt7_B           51 HHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSE   86 (90)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            445555555555555555555555554444444443


No 66 
>2fcw_A Alpha-2-macroglobulin receptor-associated protein; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: a.13.1.1 PDB: 2ftu_A
Probab=30.22  E-value=2.4e+02  Score=23.62  Aligned_cols=29  Identities=21%  Similarity=0.344  Sum_probs=23.3

Q ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q 016378          136 KEVENLKAGKNALTQELLKLRQYQETADN  164 (390)
Q Consensus       136 ~EVE~LK~dq~~L~qELv~LRQqQe~le~  164 (390)
                      +|+++||.+..-...-|.+++..++.+..
T Consensus        24 ~ELeSlK~EL~HfE~rl~K~rH~~~el~l   52 (109)
T 2fcw_A           24 KELEAFREELKHFEAKIEKHNHYQKQLEI   52 (109)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57888999988888888888887776653


No 67 
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=30.22  E-value=2e+02  Score=22.69  Aligned_cols=43  Identities=14%  Similarity=0.133  Sum_probs=24.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          145 KNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFL  187 (390)
Q Consensus       145 q~~L~qELv~LRQqQe~le~el~~L~eRLq~mEq~QqQMlsFL  187 (390)
                      ...|...+..|+++...+..++..+...+..+.++|..+..=|
T Consensus        22 ~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQrd~Y~dL   64 (83)
T 2xdj_A           22 LTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQI   64 (83)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4445555555555555555555555556666666665554443


No 68 
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=29.97  E-value=1.9e+02  Score=28.46  Aligned_cols=41  Identities=5%  Similarity=-0.142  Sum_probs=19.0

Q ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          137 EVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGME  177 (390)
Q Consensus       137 EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mE  177 (390)
                      |.++++++......++.+++++++.++..+..+...+..+.
T Consensus       429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  469 (487)
T 3oja_A          429 VQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALASAN  469 (487)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhcchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhcc
Confidence            33344444444444444555544444444444444444443


No 69 
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=29.94  E-value=78  Score=25.06  Aligned_cols=34  Identities=26%  Similarity=0.233  Sum_probs=23.7

Q ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          136 KEVENLKAGKNALTQELLKLRQYQETADNKLLLL  169 (390)
Q Consensus       136 ~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L  169 (390)
                      ..|..|+.....+..++..|+++++.+..++..|
T Consensus        52 ~YI~~L~~~~~~l~~~~~~L~~~n~~L~~rl~~L   85 (88)
T 1nkp_A           52 AYILSVQAEEQKLISEEDLLRKRREQLKHKLEQL   85 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3477777777777777777777777666665544


No 70 
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=29.88  E-value=2e+02  Score=23.15  Aligned_cols=47  Identities=15%  Similarity=0.116  Sum_probs=0.0

Q ss_pred             hhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          131 HSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGME  177 (390)
Q Consensus       131 ~~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mE  177 (390)
                      ...+..+++.+..........+..-.+.....+.++.+|.+|++-+|
T Consensus        53 ~~~lE~eld~~ee~L~ea~~kLee~ek~~~~aE~ev~~L~RriqllE   99 (101)
T 3u1c_A           53 LRVTEDSRDQVLEELHKSEDSLLFAEENAAKAESEVASLNRRIQLVE   99 (101)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc


No 71 
>3cue_D Transport protein particle 22 kDa subunit; membrane traffic, GEF, tethering complex, RAB activation, GU nucleotide exchange factor; HET: PLM; 3.70A {Saccharomyces cerevisiae}
Probab=29.78  E-value=32  Score=31.31  Aligned_cols=63  Identities=16%  Similarity=0.350  Sum_probs=47.0

Q ss_pred             CCcHH-HHHHhhccCCCCCCceEEcCCCCeEEE-ecchhhhhhh-ccCCc-CCCChhhHHhh-----hcccce
Q 016378           12 VAPFL-NKCYEMVDDESTDSIISWGQSNESFVI-WDVTEFSVQL-LPRYF-KHSNFSSFIRQ-----LNIYGF   75 (390)
Q Consensus        12 ~~~Fl-~KLy~mVed~~~~~IIsWs~~G~sFVI-~d~~~F~~~V-LPkyF-KhsnfsSFvRQ-----LN~YGF   75 (390)
                      +..|+ +.+|.++=.-.-+ ...|+++++.|+| .|..-+..-| +|+.. ..-+|+.|+.=     |..-||
T Consensus        86 ~l~fI~k~~Wk~lfgk~~d-~L~~t~~~~~y~L~~d~nPl~~fv~lP~~~~~~l~y~~f~cGIIrGaL~~~g~  157 (193)
T 3cue_D           86 TSEVLSKCAFKIFLNITPN-ITNWSHNKDTFSLILDENPLADFVELPMDAMKSLWYSNILCGVLKGSLEMVQL  157 (193)
T ss_dssp             HHHHHHHHHHHHHSSCCCC-CBCCCTTSCCCBCCBSCCGGGSSCCCCTTTTTSCCTTHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHhCCCCc-cceecCCCCEEEEEECCchhhhheeCcHhHHhCcchhhhHHHHHHHHHHhCCC
Confidence            34677 4588888776554 4799999999999 7765555444 78776 67799999864     788899


No 72 
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=29.73  E-value=3.3e+02  Score=24.92  Aligned_cols=42  Identities=14%  Similarity=0.170  Sum_probs=25.6

Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          132 SALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRV  173 (390)
Q Consensus       132 ~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRL  173 (390)
                      .+|..|+..|..+.....+|+..|+.+.+.+..++.....++
T Consensus        23 ~~L~~En~~L~~ql~~k~~ei~~L~~ql~sl~~~~~~~~~~~   64 (190)
T 4emc_A           23 ANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQVKELKTQT   64 (190)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHH
Confidence            456666666666666666666666666666666655444444


No 73 
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=28.39  E-value=1.2e+02  Score=30.42  Aligned_cols=59  Identities=14%  Similarity=0.170  Sum_probs=41.2

Q ss_pred             hhhhHHHHHHHHHhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          130 DHSALWKEVENLKAGKNALTQELLK-LRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLV  188 (390)
Q Consensus       130 e~~~L~~EVE~LK~dq~~L~qELv~-LRQqQe~le~el~~L~eRLq~mEq~QqQMlsFLa  188 (390)
                      ....+..+++.|+.+++.+.+++.. -.+..+.+..++..+.+++..+|.....+-.-|.
T Consensus        36 ~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (421)
T 1ses_A           36 EVQELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEALREKEARLE   95 (421)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5677888999999999999998764 1123345566677777777777766666654443


No 74 
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=27.41  E-value=85  Score=25.95  Aligned_cols=30  Identities=20%  Similarity=0.299  Sum_probs=20.0

Q ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 016378          137 EVENLKAGKNALTQELLKLRQYQETADNKL  166 (390)
Q Consensus       137 EVE~LK~dq~~L~qELv~LRQqQe~le~el  166 (390)
                      ++..|+++...|..|-.+|+++.+.++.++
T Consensus        13 ~~~~lr~ei~~Le~E~~rLr~~~~~LE~~L   42 (100)
T 1go4_E           13 EADTLRLKVEELEGERSRLEEEKRMLEAQL   42 (100)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            566666666666666677777666666655


No 75 
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=27.41  E-value=2.2e+02  Score=29.24  Aligned_cols=59  Identities=19%  Similarity=0.009  Sum_probs=39.8

Q ss_pred             hhhhHHHHHHHHHhhhHHHHHHHHHHHH------------------------H---HHHH----HHH-HHHHHHHHHHHH
Q 016378          130 DHSALWKEVENLKAGKNALTQELLKLRQ------------------------Y---QETA----DNK-LLLLRDRVQGME  177 (390)
Q Consensus       130 e~~~L~~EVE~LK~dq~~L~qELv~LRQ------------------------q---Qe~l----e~e-l~~L~eRLq~mE  177 (390)
                      ....+..+++.|+.+++.+.+++..++.                        .   .+.+    -.+ +..+.+++..+|
T Consensus        45 ~~r~~~~~~~~l~~~rN~~sk~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~i~~le  124 (484)
T 3lss_A           45 KWRRTQFLTEASKKLINICSKAVGAKKKAKEADGDTSEIPPQVKEAYENGTLKGEQVEQLCVLQLKQLSKDLSDQVAGLA  124 (484)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC----------------------------CHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccchhhHHHhhHHHHHHHHHHHHHHHHHHH
Confidence            4677888999999999999999987765                        1   1122    334 666777777777


Q ss_pred             HHHHHHHHHHH
Q 016378          178 KSQQQMLSFLV  188 (390)
Q Consensus       178 q~QqQMlsFLa  188 (390)
                      .....+-.-+.
T Consensus       125 ~~~~~~~~~~~  135 (484)
T 3lss_A          125 KEAQQLEEERD  135 (484)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            66666654443


No 76 
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=27.36  E-value=2.7e+02  Score=23.20  Aligned_cols=52  Identities=12%  Similarity=0.132  Sum_probs=27.3

Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          132 SALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQM  183 (390)
Q Consensus       132 ~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mEq~QqQM  183 (390)
                      ..+.+|+...+.+...|.+++..|+...+.++.+=.--=.+|+..|--.|.+
T Consensus         7 ~al~~eL~~~~~ei~~L~~ei~eLk~~ve~lEkERDFYF~KLRdIEiLcQe~   58 (106)
T 4e61_A            7 VAIQAELTKSQETIGSLNEEIEQYKGTVSTLEIEREFYFNKLRDIEILVHTT   58 (106)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3455566666666666666666665555555443332233455555444443


No 77 
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=27.11  E-value=1.3e+02  Score=25.08  Aligned_cols=30  Identities=27%  Similarity=0.266  Sum_probs=12.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          147 ALTQELLKLRQYQETADNKLLLLRDRVQGM  176 (390)
Q Consensus       147 ~L~qELv~LRQqQe~le~el~~L~eRLq~m  176 (390)
                      +|.+..++..++.+.+..++..++.++...
T Consensus         8 ~~~~~~~~~e~e~~~l~~~~~el~~~l~~~   37 (125)
T 1joc_A            8 ALLERCLKGEGEIEKLQTKVLELQRKLDNT   37 (125)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence            333333334444444444444444444433


No 78 
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=26.38  E-value=2.2e+02  Score=24.96  Aligned_cols=37  Identities=27%  Similarity=0.241  Sum_probs=27.3

Q ss_pred             HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          138 VENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQ  174 (390)
Q Consensus       138 VE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq  174 (390)
                      |+.|++...+-++|+.+||-+..++...+.....-|.
T Consensus        48 VDQlqKRn~~HQKEi~~Lrae~~~~QRn~~K~~~~Lk   84 (167)
T 4gkw_A           48 VDQLQKRNVAHQKEIGKLRAELGTAQRNLEKADQLLK   84 (167)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence            6778888888888888888888777777665554443


No 79 
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=26.29  E-value=2.7e+02  Score=23.23  Aligned_cols=36  Identities=17%  Similarity=0.230  Sum_probs=22.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          146 NALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQ  181 (390)
Q Consensus       146 ~~L~qELv~LRQqQe~le~el~~L~eRLq~mEq~Qq  181 (390)
                      .++.+||...+++...+..++..|+..++++|+.=.
T Consensus         7 ~al~~eL~~~~~ei~~L~~ei~eLk~~ve~lEkERD   42 (106)
T 4e61_A            7 VAIQAELTKSQETIGSLNEEIEQYKGTVSTLEIERE   42 (106)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345556666666666666666677777777765433


No 80 
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=25.88  E-value=2.4e+02  Score=31.73  Aligned_cols=39  Identities=18%  Similarity=0.313  Sum_probs=16.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          147 ALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLS  185 (390)
Q Consensus       147 ~L~qELv~LRQqQe~le~el~~L~eRLq~mEq~QqQMls  185 (390)
                      .|..|+..++++.+.+..+...++++++.+....+..++
T Consensus       988 ~L~~e~~~l~~~~~~~~ke~~~lee~~~~~~~~L~~kv~ 1026 (1080)
T 2dfs_A          988 SLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVS 1026 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344444444444444444444444444444433333333


No 81 
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=25.81  E-value=3.5e+02  Score=23.92  Aligned_cols=48  Identities=13%  Similarity=0.155  Sum_probs=23.0

Q ss_pred             HHHHHHHhhhHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          136 KEVENLKAGKNALTQELLKLR-------QYQETADNKLLLLRDRVQGMEKSQQQM  183 (390)
Q Consensus       136 ~EVE~LK~dq~~L~qELv~LR-------QqQe~le~el~~L~eRLq~mEq~QqQM  183 (390)
                      ..|..|+.+...+..++..+.       .-.+.+..++.+|.-++..+|.+.+.+
T Consensus        68 ~~I~~L~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kL  122 (152)
T 3a7p_A           68 NTLAILQKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDL  122 (152)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345555555555555444443       333444455555554554444444444


No 82 
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=25.78  E-value=2.5e+02  Score=22.32  Aligned_cols=45  Identities=16%  Similarity=0.079  Sum_probs=18.2

Q ss_pred             HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          140 NLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQML  184 (390)
Q Consensus       140 ~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mEq~QqQMl  184 (390)
                      -|+.+...|..+-..|.++.+.+...-..+.+.++...+.+..--
T Consensus        24 lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq   68 (81)
T 2jee_A           24 LLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQ   68 (81)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence            333333333333333333333333333335555554444444433


No 83 
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=25.69  E-value=1.7e+02  Score=23.20  Aligned_cols=39  Identities=26%  Similarity=0.308  Sum_probs=23.8

Q ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          137 EVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQG  175 (390)
Q Consensus       137 EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~  175 (390)
                      -+..|...+..+..++.+|..+...+..++..++..|+.
T Consensus        71 a~~~L~~~~e~ie~~i~~le~~~~~l~~~l~~lk~~l~~  109 (117)
T 2zqm_A           71 AVAELKEKIETLEVRLNALERQEKKLNEKLKELTAQIQS  109 (117)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            355566666666666666666666666666666655543


No 84 
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=25.64  E-value=1.2e+02  Score=25.95  Aligned_cols=34  Identities=18%  Similarity=0.245  Sum_probs=0.0

Q ss_pred             hHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 016378          133 ALWKEVENLKAGKNALTQELLKLRQYQETADNKL  166 (390)
Q Consensus       133 ~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el  166 (390)
                      .|..||..|+........|+.+||.+.+.+...+
T Consensus        75 eLqgEI~~Lnq~Lq~a~ae~erlr~~~~~~~~r~  108 (121)
T 3mq7_A           75 ELEGEITTLNHKLQDASAEVERLRRENQVLSVRI  108 (121)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhHh


No 85 
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=24.91  E-value=2.5e+02  Score=21.88  Aligned_cols=36  Identities=19%  Similarity=0.200  Sum_probs=17.2

Q ss_pred             HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          138 VENLKAGKNALTQELLKLRQYQETADNKLLLLRDRV  173 (390)
Q Consensus       138 VE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRL  173 (390)
                      ...|......|.+.+..-++++.....++..+-+.|
T Consensus        16 N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~~~e~L   51 (72)
T 3cve_A           16 NKDLEGQLSEMEQRLEKSQSEQDAFRSNLKTLLEIL   51 (72)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334444444444555555555555555554444433


No 86 
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=24.87  E-value=1.1e+02  Score=20.83  Aligned_cols=26  Identities=12%  Similarity=0.222  Sum_probs=19.9

Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHH
Q 016378          132 SALWKEVENLKAGKNALTQELLKLRQ  157 (390)
Q Consensus       132 ~~L~~EVE~LK~dq~~L~qELv~LRQ  157 (390)
                      ..|+..|+.|=..+..|..|+.+|+.
T Consensus         4 ~QLEdKVEeLl~~n~~Le~EV~RLk~   29 (34)
T 1uo4_A            4 KQIEDKGEEILSKLYHIENELARIKK   29 (34)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            35677788888888888888887764


No 87 
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=24.61  E-value=2.4e+02  Score=21.65  Aligned_cols=48  Identities=13%  Similarity=0.221  Sum_probs=22.2

Q ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          137 EVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQML  184 (390)
Q Consensus       137 EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mEq~QqQMl  184 (390)
                      +.+........+..++....+.....+.++..|..|++.+|.-....-
T Consensus        14 e~d~a~~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE~eld~~e   61 (81)
T 1ic2_A           14 DKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKYS   61 (81)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            333333333444444444444444455555555555555554444333


No 88 
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=24.59  E-value=1.1e+02  Score=25.66  Aligned_cols=16  Identities=19%  Similarity=0.239  Sum_probs=3.8

Q ss_pred             hHHHHHHHHHhhhHHH
Q 016378          133 ALWKEVENLKAGKNAL  148 (390)
Q Consensus       133 ~L~~EVE~LK~dq~~L  148 (390)
                      .|..+|+.||+++..+
T Consensus         3 ~l~~~~~~l~~~~~~~   18 (182)
T 3kqg_A            3 TLNAQIPELKSDLEKA   18 (182)
T ss_dssp             ----------CHHHHH
T ss_pred             chhhhHHHHHHHHHHH
Confidence            4566777787777654


No 89 
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=24.39  E-value=2e+02  Score=26.40  Aligned_cols=38  Identities=18%  Similarity=0.133  Sum_probs=22.3

Q ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          137 EVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQ  174 (390)
Q Consensus       137 EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq  174 (390)
                      .|..|..++..|.+++....++.+.+..+++.+++...
T Consensus        21 LV~~L~~En~~L~~ql~~k~~ei~~L~~ql~sl~~~~~   58 (190)
T 4emc_A           21 LVANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQVK   58 (190)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            35566666666666666555555555566655555443


No 90 
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=24.33  E-value=1.9e+02  Score=28.30  Aligned_cols=34  Identities=12%  Similarity=0.106  Sum_probs=14.7

Q ss_pred             hHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 016378          133 ALWKEVENLKAGKNALTQELLKLRQYQETADNKL  166 (390)
Q Consensus       133 ~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el  166 (390)
                      .|..|+..|.........++..|+...+.+..++
T Consensus         9 ~~~~~~~~~e~~i~~~~~~i~~L~~~l~~~~~~i   42 (323)
T 1lwu_C            9 KILEEVRILEQIGVSHDAQIQELSEMWRVNQQFV   42 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Confidence            4455555554444444444444444333333333


No 91 
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=24.18  E-value=1.5e+02  Score=23.55  Aligned_cols=30  Identities=23%  Similarity=0.216  Sum_probs=11.8

Q ss_pred             HHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          140 NLKAGKNALTQELLKLRQYQETADNKLLLL  169 (390)
Q Consensus       140 ~LK~dq~~L~qELv~LRQqQe~le~el~~L  169 (390)
                      .++.+...+..++..|+..+..+..++..+
T Consensus         7 ~~~~~~~~~~~~l~~L~~~~~~l~~~i~~l   36 (112)
T 1l8d_A            7 ELETKKTTIEEERNEITQRIGELKNKIGDL   36 (112)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333333444444444444433333333333


No 92 
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=24.00  E-value=2e+02  Score=27.31  Aligned_cols=38  Identities=16%  Similarity=0.233  Sum_probs=15.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhhc
Q 016378          164 NKLLLLRDRVQGMEKSQQQMLSFLVMAMQNPSFLVQLL  201 (390)
Q Consensus       164 ~el~~L~eRLq~mEq~QqQMlsFLakamqnP~fl~ql~  201 (390)
                      .++..+-.+++.....++.++.-||.+=++-.+|..-+
T Consensus       177 sEI~EID~KI~~L~~mR~~vl~RLA~lEqdEl~LE~eL  214 (242)
T 3uux_B          177 SEIRDIEVEVENLRQKKEKLLGKIANIEQNQLLLEDNL  214 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence            33333333344344444444444444444444444333


No 93 
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=23.77  E-value=2.5e+02  Score=27.81  Aligned_cols=36  Identities=19%  Similarity=0.192  Sum_probs=19.7

Q ss_pred             hHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          133 ALWKEVENLKAGKNALTQELLKLRQYQETADNKLLL  168 (390)
Q Consensus       133 ~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~  168 (390)
                      .+..+++.|+++...|..++..+..+.+.+..++..
T Consensus         7 ~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~   42 (403)
T 4etp_A            7 ALKEKIAALKEKIAALKEKIKDTELGMKELNEILIK   42 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            445555555555555555555555555555544443


No 94 
>1avy_A Fibritin, gpwac M; bacteriophage T4, structural protein, chaperone, bacteriopha assembly, protein folding; 1.85A {Enterobacteria phage T4} SCOP: h.1.17.1
Probab=23.19  E-value=1.1e+02  Score=23.93  Aligned_cols=38  Identities=18%  Similarity=0.293  Sum_probs=20.1

Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          132 SALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGM  176 (390)
Q Consensus       132 ~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~m  176 (390)
                      .||..-|+.+-.++.++.+|+..+       ...+..++..++.+
T Consensus         4 rGl~nsVk~~eT~iaa~~~ev~t~-------~~~l~~~e~~vqaL   41 (74)
T 1avy_A            4 SGLTNKIKAIETDIASVRQEVNTA-------KGNISSLQGDVQAL   41 (74)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHH
T ss_pred             ccccchhcccccchhhhheeeccc-------cchhhhhhhhhHHH
Confidence            455556667777777777666444       33444455555444


No 95 
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=23.19  E-value=1.4e+02  Score=31.48  Aligned_cols=15  Identities=20%  Similarity=0.346  Sum_probs=7.3

Q ss_pred             HHHHHHHHHHHHHHh
Q 016378          177 EKSQQQMLSFLVMAM  191 (390)
Q Consensus       177 Eq~QqQMlsFLakam  191 (390)
                      |..|+|+.+..++=+
T Consensus       179 ~~~QKQLeQv~a~dL  193 (562)
T 3ghg_A          179 EDQQKQLEQVIAKDL  193 (562)
T ss_dssp             HHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHhhccc
Confidence            344555555544433


No 96 
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=23.07  E-value=1.2e+02  Score=20.39  Aligned_cols=25  Identities=4%  Similarity=0.169  Sum_probs=18.7

Q ss_pred             hHHHHHHHHHhhhHHHHHHHHHHHH
Q 016378          133 ALWKEVENLKAGKNALTQELLKLRQ  157 (390)
Q Consensus       133 ~L~~EVE~LK~dq~~L~qELv~LRQ  157 (390)
                      .|+.-|+.|=..+..|..|+.+|+.
T Consensus         4 QLEdKvEeLl~~~~~Le~EV~RLk~   28 (33)
T 3c3g_A            4 XIEXKLXEIXSKXYHXENXLARIKX   28 (33)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            5666778887788888888877754


No 97 
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=22.92  E-value=1.5e+02  Score=23.03  Aligned_cols=40  Identities=10%  Similarity=0.080  Sum_probs=20.1

Q ss_pred             HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          138 VENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGME  177 (390)
Q Consensus       138 VE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mE  177 (390)
                      +.-.-.....|...+.+..++...+..++..|.+|+..++
T Consensus        23 lAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~~~~   62 (78)
T 3efg_A           23 LSFQEQALTELSEALADARLTGARNAELIRHLLEDLGKVR   62 (78)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            3334444555555555555555566666666666665544


No 98 
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=22.46  E-value=1e+02  Score=24.02  Aligned_cols=30  Identities=13%  Similarity=0.284  Sum_probs=19.1

Q ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 016378          137 EVENLKAGKNALTQELLKLRQYQETADNKL  166 (390)
Q Consensus       137 EVE~LK~dq~~L~qELv~LRQqQe~le~el  166 (390)
                      -|..|+.+...+..|...|+.+++.+..++
T Consensus        48 yI~~L~~~~~~l~~e~~~L~~e~~~L~~~L   77 (80)
T 1nlw_A           48 HIKKLEDSDRKAVHQIDQLQREQRHLKRQL   77 (80)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            466677777777777666666666554443


No 99 
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=22.16  E-value=1.3e+02  Score=20.38  Aligned_cols=26  Identities=8%  Similarity=0.132  Sum_probs=19.2

Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHH
Q 016378          132 SALWKEVENLKAGKNALTQELLKLRQ  157 (390)
Q Consensus       132 ~~L~~EVE~LK~dq~~L~qELv~LRQ  157 (390)
                      +.|+.-|+.|=..+..|..|+.+||.
T Consensus         4 nQLEdKVEeLl~~~~~Le~EV~RLk~   29 (34)
T 3c3f_A            4 XQIEXKLEXILSXLYHXENEXARIXK   29 (34)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence            35667788888888888888877764


No 100
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=22.02  E-value=2e+02  Score=22.99  Aligned_cols=26  Identities=19%  Similarity=0.257  Sum_probs=10.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          148 LTQELLKLRQYQETADNKLLLLRDRV  173 (390)
Q Consensus       148 L~qELv~LRQqQe~le~el~~L~eRL  173 (390)
                      +..++..|.+++..+..++..|...+
T Consensus        41 ~~~r~~~Le~EN~~Lr~~v~~L~~E~   66 (87)
T 1hjb_A           41 TQHKVLELTAENERLQKKVEQLSREL   66 (87)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444444444444444444433333


No 101
>3viq_B Mating-type switching protein SWI5; recombination activator; 2.20A {Schizosaccharomyces pombe} PDB: 3vir_A*
Probab=22.00  E-value=3.1e+02  Score=21.99  Aligned_cols=59  Identities=19%  Similarity=0.148  Sum_probs=37.6

Q ss_pred             hhhHHHHHHHHHhhhHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          131 HSALWKEVENLKAGKNALTQELLKLRQYQ------ETADNKLLLLRDRVQGMEKSQQQMLSFLVMA  190 (390)
Q Consensus       131 ~~~L~~EVE~LK~dq~~L~qELv~LRQqQ------e~le~el~~L~eRLq~mEq~QqQMlsFLaka  190 (390)
                      ...|..+|..|+.+...|.+++..++.+.      ......+..| ..+-....--|.++..+|..
T Consensus         3 ~~~L~~~i~~L~~q~~~L~~ei~~~~a~L~~~~~~~~~~~hI~~L-h~YNeiKD~gq~L~g~iA~~   67 (85)
T 3viq_B            3 KSQLESRVHLLEQQKEQLESSLQDALAKLKNRDAKQTVQKHIDLL-HTYNEIRDIALGMIGKVAEH   67 (85)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHH
Confidence            45788889999999999999998886532      2233333333 33444555556666666653


No 102
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=21.50  E-value=1.4e+02  Score=20.14  Aligned_cols=25  Identities=16%  Similarity=0.109  Sum_probs=19.1

Q ss_pred             hHHHHHHHHHhhhHHHHHHHHHHHH
Q 016378          133 ALWKEVENLKAGKNALTQELLKLRQ  157 (390)
Q Consensus       133 ~L~~EVE~LK~dq~~L~qELv~LRQ  157 (390)
                      .|+.-|+.|-..+..|..|+.+|+.
T Consensus         4 QLEdKVEell~~~~~le~EV~Rl~~   28 (33)
T 2wq1_A            4 QLEDKIEENTSKIYHNTNEIARNTK   28 (33)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            5677788888888888888887754


No 103
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=21.32  E-value=4.3e+02  Score=23.34  Aligned_cols=34  Identities=12%  Similarity=0.201  Sum_probs=22.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          150 QELLKLRQYQETADNKLLLLRDRVQGMEKSQQQM  183 (390)
Q Consensus       150 qELv~LRQqQe~le~el~~L~eRLq~mEq~QqQM  183 (390)
                      +-+..++.+..++.-++..++++++.+++-=+++
T Consensus        96 K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~L  129 (152)
T 3a7p_A           96 KNTERLNAALISGTIENNVLQQKLSDLKKEHSQL  129 (152)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4456667777777777777777777777643333


No 104
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=20.86  E-value=1.4e+02  Score=20.19  Aligned_cols=26  Identities=23%  Similarity=0.304  Sum_probs=19.5

Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHH
Q 016378          132 SALWKEVENLKAGKNALTQELLKLRQ  157 (390)
Q Consensus       132 ~~L~~EVE~LK~dq~~L~qELv~LRQ  157 (390)
                      +.|+.-|+.|=.++..|..|+.+||.
T Consensus         4 nQLE~kVEeLl~~n~~Le~eV~rLk~   29 (34)
T 2oxj_A            4 XQLEXKVXELLXKNXHLEXEVXRLKX   29 (34)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence            35677788888888888888877754


No 105
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A
Probab=20.58  E-value=1.7e+02  Score=19.24  Aligned_cols=26  Identities=35%  Similarity=0.389  Sum_probs=15.9

Q ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHH
Q 016378          132 SALWKEVENLKAGKNALTQELLKLRQ  157 (390)
Q Consensus       132 ~~L~~EVE~LK~dq~~L~qELv~LRQ  157 (390)
                      ..|.+|+..-..+.-.|.+|+..|..
T Consensus         4 aqlekevaqaeaenyqleqevaqleh   29 (33)
T 1fmh_A            4 AQLEKEVAQAEAENYQLEQEVAQLEH   29 (33)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            45666666666666666666665543


No 106
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=20.44  E-value=3e+02  Score=25.50  Aligned_cols=45  Identities=16%  Similarity=0.188  Sum_probs=21.8

Q ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016378          137 EVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQMLSFLVMAMQ  192 (390)
Q Consensus       137 EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mEq~QqQMlsFLakamq  192 (390)
                      |.+.|......|..|+..|+++++           +|+.+-..-|.|.+.|.+++.
T Consensus       116 EN~~Lh~~ie~l~eEi~~LkeEn~-----------eLkeLae~~q~la~vi~~l~~  160 (209)
T 2wvr_A          116 ENEKLHKEIEQKDNEIARLKKENK-----------ELAEVAEHVQYMAELIERLNG  160 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHhc
Confidence            344444444444444444444333           333344444556666666666


No 107
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=20.24  E-value=3.3e+02  Score=27.16  Aligned_cols=54  Identities=19%  Similarity=0.158  Sum_probs=0.0

Q ss_pred             hhhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          130 DHSALWKEVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQGMEKSQQQM  183 (390)
Q Consensus       130 e~~~L~~EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq~mEq~QqQM  183 (390)
                      +...|..|+..|+.....|..++.+++.+.+.+..++......-+.+....+.+
T Consensus         4 ~~~~l~~el~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~rr~l~n~~~~l   57 (412)
T 3u06_A            4 MHAALSTEVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDL   57 (412)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh


No 108
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=20.22  E-value=1.8e+02  Score=22.78  Aligned_cols=38  Identities=18%  Similarity=0.176  Sum_probs=23.3

Q ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016378          137 EVENLKAGKNALTQELLKLRQYQETADNKLLLLRDRVQ  174 (390)
Q Consensus       137 EVE~LK~dq~~L~qELv~LRQqQe~le~el~~L~eRLq  174 (390)
                      -+..|...+..+..++.+|..+...+..++..++..|+
T Consensus        66 ~~~~L~~~~e~i~~~i~~le~~~~~~~~~l~~lk~~l~  103 (107)
T 1fxk_A           66 LTEELQEKLETLQLREKTIERQEERVMKKLQEMQVNIQ  103 (107)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34556666666666666666666666666666665554


Done!