BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016380
(390 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 84/169 (49%), Gaps = 14/169 (8%)
Query: 148 IAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELR 207
+A G+ V + L+VAN GDSRA++G + G A L+ DHNA E Q L+
Sbjct: 196 VAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLK 255
Query: 208 SLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLK------------RPEFSLDPSFPRF 255
HP + V+KQ R+ GL+ R+ GD K P+ D + +F
Sbjct: 256 LEHPKNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKF 313
Query: 256 HLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIV 304
P P LTAEP + L+P DKFL+ A+DGLWE + Q+ V IV
Sbjct: 314 IPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 362
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 84/169 (49%), Gaps = 14/169 (8%)
Query: 148 IAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELR 207
+A G+ V + L+VAN GDSRA++G + G A L+ DHNA E + L+
Sbjct: 196 VAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNEREVERLK 255
Query: 208 SLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLK------------RPEFSLDPSFPRF 255
HP + V+KQ R+ GL+ R+ GD K P+ D + +F
Sbjct: 256 LEHPKNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKF 313
Query: 256 HLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIV 304
P P LTAEP + L+P DKFL+ A+DGLWE + Q+ V IV
Sbjct: 314 IPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 362
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 36/226 (15%)
Query: 82 AFFVGVYDGHGGPEASRFIRDHLFRHLMR-FAREGGTISE--DILRSAFSATEDGFLTLV 138
A F GVYDGHGG + + + R+ + L A+E +S+ L A + FL +
Sbjct: 52 AHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVD 111
Query: 139 RRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNAC 198
+ P +GS +V V++ ++VAN GDSRAV+ GK+ A L++DH
Sbjct: 112 SEIESVAP--ETVGSTSVVAVVFPSHIFVANCGDSRAVL-CRGKT----ALPLSVDHKPD 164
Query: 199 MEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLP 258
E+ + + V+ G R+ G++ +SRSIGD YLK
Sbjct: 165 REDEAARIEAA----GGKVIQWNGA-RVFGVLAMSRSIGDRYLK---------------- 203
Query: 259 EPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIV 304
P + +P + D LI ASDG+W+ +T++EA ++
Sbjct: 204 -----PSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMA 244
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 107/230 (46%), Gaps = 44/230 (19%)
Query: 82 AFFVGVYDGHGGPEASRFIRDHLFRHLMR-FARE------GGTISEDILRSAFSATEDGF 134
A F GVYDGHGG + + + R+ + L A+E G T E ++ F++ F
Sbjct: 55 AHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNS----F 110
Query: 135 LTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMD 194
L + + P +GS +V V++ ++VAN GDSRAV+ GK+ A L++D
Sbjct: 111 LRVDSEIESVAP--ETVGSTSVVAVVFPSHIFVANCGDSRAVL-CRGKT----ALPLSVD 163
Query: 195 HNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPR 254
H E+ + + V+ G R+ G++ +SRSIGD YLK
Sbjct: 164 HKPDREDEAARIEAA----GGKVIQWNGA-RVFGVLAMSRSIGDRYLK------------ 206
Query: 255 FHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIV 304
P + +P + D LI ASDG+W+ +T++EA ++
Sbjct: 207 ---------PSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMA 247
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 107/230 (46%), Gaps = 44/230 (19%)
Query: 82 AFFVGVYDGHGGPEASRFIRDHLFRHLMR-FARE------GGTISEDILRSAFSATEDGF 134
A F GVYDGHGG + + + R+ + L A+E G T E ++ F++ F
Sbjct: 67 AHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNS----F 122
Query: 135 LTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMD 194
L + + P +GS +V V++ ++VAN GDSRAV+ GK+ A L++D
Sbjct: 123 LRVDSEIESVAP--ETVGSTSVVAVVFPSHIFVANCGDSRAVL-CRGKT----ALPLSVD 175
Query: 195 HNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPR 254
H E+ + + V+ G R+ G++ +SRSIGD YLK
Sbjct: 176 HKPDREDEAARIEAA----GGKVIQWNGA-RVFGVLAMSRSIGDRYLK------------ 218
Query: 255 FHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIV 304
P + +P + D LI ASDG+W+ +T++EA ++
Sbjct: 219 ---------PSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMA 259
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 42/230 (18%)
Query: 82 AFFVGVYDGHGGPEASRFIRDHLFRHLMR-FARE------GGTISEDILRSAFSATEDGF 134
A F GVYDGHGG + + + R+ + L +E G T E ++ F++ F
Sbjct: 59 AHFFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNS----F 114
Query: 135 LTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMD 194
+ + + +GS +V V++ ++VAN GDSRAV+ GK+ L++D
Sbjct: 115 MRVDSEIETVAHAPETVGSTSVVAVVFPTHIFVANCGDSRAVL-CRGKT----PLALSVD 169
Query: 195 HNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPR 254
H ++ + + V++ R+ G++ +SRSIGD YLK
Sbjct: 170 HKPDRDDEAARIEAAGGK-----VIRWNGARVFGVLAMSRSIGDRYLK------------ 212
Query: 255 FHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIV 304
P + +P + + D LI ASDGLW+ +TN+E D+
Sbjct: 213 ---------PSVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLA 253
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 37/235 (15%)
Query: 80 RDAFFVGVYDGHGGPEASRFIRDHLFRHL-----MRFAREGGTISEDILRSAFSATEDGF 134
D F VYDGH G + + HL H+ R A + G+ E + + + GF
Sbjct: 53 EDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGF 112
Query: 135 LTL---VRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQL 191
L + +R ++ + GS + +I +Y N GDSRAV L ++G++
Sbjct: 113 LKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAV---LYRNGQVCFS-- 167
Query: 192 TMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPS 251
T DH C ++ +++ VM Q R+ G + VSR++GD K +D
Sbjct: 168 TQDHKPCNPREKERIQNAGGS-----VMIQ---RVNGSLAVSRALGDYDYK----CVDGK 215
Query: 252 FPRFHL--PEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIV 304
P L PEP +L AE D+F+I A DG+W+ ++N+E + V
Sbjct: 216 GPTEQLVSPEPEVYEILRAEE----------DEFIILAXDGIWDVMSNEELCEYV 260
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 106/241 (43%), Gaps = 51/241 (21%)
Query: 84 FVGVYDGHGGPEASRFIRDHLFRHLM------------RFAREGGTISEDILRSAFSATE 131
F GVYDGHGG + + + RD L L R EG + D + ++ T
Sbjct: 70 FFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTV 129
Query: 132 DGFL------TLVRRTCGIKPVIAA--IGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKS 183
DG + +V + + +A+ +GS +V ++ + V+N GDSRAV+ GK
Sbjct: 130 DGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFR-GKE 188
Query: 184 GKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKR 243
A L++DH E+ + + V+ QG R+ G++ +SRSIGD YLK
Sbjct: 189 ----AMPLSVDHKPDREDEYARIENA----GGKVIQWQGA-RVFGVLAMSRSIGDRYLK- 238
Query: 244 PEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDI 303
P + EP + D+ LI ASDGLW+ + NQE +I
Sbjct: 239 --------------------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEI 278
Query: 304 V 304
Sbjct: 279 A 279
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 106/241 (43%), Gaps = 51/241 (21%)
Query: 84 FVGVYDGHGGPEASRFIRDHLFRHLM------------RFAREGGTISEDILRSAFSATE 131
F GVYDGHGG + + + RD L L R EG + D + ++ T
Sbjct: 77 FFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTV 136
Query: 132 DGFL------TLVRRTCGIKPVIAA--IGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKS 183
DG + +V + + +A+ +GS +V ++ + V+N GDSRAV+ GK
Sbjct: 137 DGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFR-GKE 195
Query: 184 GKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKR 243
A L++DH E+ + + V+ QG R+ G++ +SRSIGD YLK
Sbjct: 196 ----AMPLSVDHKPDREDEYARIENA----GGKVIQWQGA-RVFGVLAMSRSIGDRYLK- 245
Query: 244 PEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDI 303
P + EP + D+ LI ASDGLW+ + NQE +I
Sbjct: 246 --------------------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEI 285
Query: 304 V 304
Sbjct: 286 A 286
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 106/241 (43%), Gaps = 51/241 (21%)
Query: 84 FVGVYDGHGGPEASRFIRDHLFRHLM------------RFAREGGTISEDILRSAFSATE 131
F GVYDGHGG + + + RD L L R EG + D + ++ T
Sbjct: 67 FFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWDKVFTSCFLTV 126
Query: 132 DGFL------TLVRRTCGIKPVIAA--IGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKS 183
DG + +V + + +A+ +GS +V ++ + V+N GDSRAV+ GK
Sbjct: 127 DGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFR-GKE 185
Query: 184 GKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKR 243
A L++DH E+ + + V+ QG R+ G++ +SRSIGD YLK
Sbjct: 186 ----AMPLSVDHKPDREDEYARIENA----GGKVIQWQGA-RVFGVLAMSRSIGDRYLK- 235
Query: 244 PEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDI 303
P + EP + D+ LI ASDGLW+ + NQE +I
Sbjct: 236 --------------------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEI 275
Query: 304 V 304
Sbjct: 276 A 276
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 106/241 (43%), Gaps = 51/241 (21%)
Query: 84 FVGVYDGHGGPEASRFIRDHLFRHLM------------RFAREGGTISEDILRSAFSATE 131
F GVYDGHGG + + + RD L L R EG + D + ++ T
Sbjct: 64 FFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTV 123
Query: 132 DGFL------TLVRRTCGIKPVIAA--IGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKS 183
DG + +V + + +A+ +GS +V ++ + V+N GDSRAV+ GK
Sbjct: 124 DGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFR-GKE 182
Query: 184 GKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKR 243
A L++DH E+ + + V+ QG R+ G++ +SRSIGD YLK
Sbjct: 183 ----AMPLSVDHKPDREDEYARIENA----GGKVIQWQGA-RVFGVLAMSRSIGDRYLK- 232
Query: 244 PEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDI 303
P + EP + D+ LI ASDGLW+ + NQE +I
Sbjct: 233 --------------------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEI 272
Query: 304 V 304
Sbjct: 273 A 273
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 106/241 (43%), Gaps = 51/241 (21%)
Query: 84 FVGVYDGHGGPEASRFIRDHLFRHLM------------RFAREGGTISEDILRSAFSATE 131
F GVYDGHGG + + + RD L L R EG + D + ++ T
Sbjct: 68 FFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTV 127
Query: 132 DGFL------TLVRRTCGIKPVIAA--IGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKS 183
DG + +V + + +A+ +GS +V ++ + V+N GDSRAV+ GK
Sbjct: 128 DGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFR-GKE 186
Query: 184 GKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKR 243
A L++DH E+ + + V+ QG R+ G++ +SRSIGD YLK
Sbjct: 187 ----AMPLSVDHKPDREDEYARIENA----GGKVIQWQGA-RVFGVLAMSRSIGDRYLK- 236
Query: 244 PEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDI 303
P + EP + D+ LI ASDGLW+ + NQE +I
Sbjct: 237 --------------------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEI 276
Query: 304 V 304
Sbjct: 277 A 277
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 106/241 (43%), Gaps = 51/241 (21%)
Query: 84 FVGVYDGHGGPEASRFIRDHLFRHLM------------RFAREGGTISEDILRSAFSATE 131
F GVYDGHGG + + + RD L L R EG + D + ++ T
Sbjct: 53 FFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTV 112
Query: 132 DGFL------TLVRRTCGIKPVIAA--IGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKS 183
DG + +V + + +A+ +GS +V ++ + V+N GDSRAV+ GK
Sbjct: 113 DGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFR-GKE 171
Query: 184 GKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKR 243
A L++DH E+ + + V+ QG R+ G++ +SRSIGD YLK
Sbjct: 172 ----AMPLSVDHKPDREDEYARIENA----GGKVIQWQGA-RVFGVLAMSRSIGDRYLK- 221
Query: 244 PEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDI 303
P + EP + D+ LI ASDGLW+ + NQE +I
Sbjct: 222 --------------------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEI 261
Query: 304 V 304
Sbjct: 262 A 262
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 95/228 (41%), Gaps = 31/228 (13%)
Query: 81 DAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFLTLVRR 140
+ + VYDGHGGP A+ F H+ + +M + + E +L AF + F + R
Sbjct: 34 EVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNL-ETLLTLAFLEIDKAFSSHARL 92
Query: 141 TCGIKPVIAAIGSCCLVGVIWKG-TLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACM 199
+ + G+ V ++ G L VA+VGDSRA++ GK K LT+DH
Sbjct: 93 SA--DATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMK-----LTIDHTP-- 143
Query: 200 EEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPE 259
E + E + + G + G + ++RSIGD LK +P R L
Sbjct: 144 -ERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLH- 201
Query: 260 PIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIVYNC 307
+D FL+ +DG+ + +QE D V C
Sbjct: 202 ------------------HADDSFLVLTTDGINFMVNSQEICDFVNQC 231
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 96/231 (41%), Gaps = 34/231 (14%)
Query: 84 FVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFL-------- 135
F VYDGHGG E +++ HL L G E L+ AF + L
Sbjct: 53 FFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVIEEL 112
Query: 136 -TLVRRTCGIKPVIAAIGSCCLVGVIWKGT-LYVANVGDSRAVIGSLGKSGKIVAEQLTM 193
L + G C V + G LYVAN GDSR V+ GK A +++
Sbjct: 113 KVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGK-----ALEMSF 167
Query: 194 DHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFP 253
DH E E + + + + R+ G + +SR+IGD K ++ S P
Sbjct: 168 DHKP---EDTVEYQRIEKAGGRVTL----DGRVNGGLNLSRAIGDHGYK-----MNKSLP 215
Query: 254 RFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIV 304
+++A P I + P D+F++ A DG+W +T+++ V V
Sbjct: 216 -------AEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFV 259
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 95/228 (41%), Gaps = 31/228 (13%)
Query: 81 DAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFLTLVRR 140
+ + VYDGHGGP A+ F H+ + +M + + E +L AF + F + R
Sbjct: 148 EVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNL-ETLLTLAFLEIDKAFSSHARL 206
Query: 141 TCGIKPVIAAIGSCCLVGVIWKG-TLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACM 199
+ + G+ V ++ G L VA+VGDSRA++ GK K LT+DH
Sbjct: 207 SA--DATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMK-----LTIDHTP-- 257
Query: 200 EEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPE 259
E + E + + G + G + ++RSIGD LK +P R L
Sbjct: 258 -ERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLH- 315
Query: 260 PIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIVYNC 307
+D FL+ +DG+ + +QE D V C
Sbjct: 316 ------------------HADDSFLVLTTDGINFMVNSQEICDFVNQC 345
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 29/225 (12%)
Query: 84 FVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFLTL---VRR 140
F VYDGH G + +++ +HL H+ G+ + + + GFL + +R
Sbjct: 55 FFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRV 114
Query: 141 TCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACME 200
K GS + +I Y N GDSR G L ++ K+ T DH
Sbjct: 115 MSEKKHGADRSGSTAVGVLISPQHTYFINCGDSR---GLLCRNRKV--HFFTQDHKPSNP 169
Query: 201 EVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEP 260
++ ++ ++ VM Q R+ G + VSR++GD + H P
Sbjct: 170 LEKERIQ-----NAGGSVMIQ---RVNGSLAVSRALGDF-----------DYKCVHGKGP 210
Query: 261 IRRPVLTAEPSIC-TRALQPNDKFLIFASDGLWEHLTNQEAVDIV 304
+ +++ EP + + +D+F+I A DG+W+ + N+E D V
Sbjct: 211 TEQ-LVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFV 254
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 29/225 (12%)
Query: 84 FVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFLTL---VRR 140
F VYDGH G + +++ +HL H+ G+ + + + GFL + +R
Sbjct: 55 FFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRV 114
Query: 141 TCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACME 200
K GS + +I Y N GDSR G L ++ K+ T DH
Sbjct: 115 MSEKKHGADRSGSTAVGVLISPQHTYFINCGDSR---GLLCRNRKV--HFFTQDHKPSNP 169
Query: 201 EVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEP 260
++ ++ ++ VM Q R+ G + VSR++GD + H P
Sbjct: 170 LEKERIQ-----NAGGSVMIQ---RVNGSLAVSRALGDF-----------DYKCVHGKGP 210
Query: 261 IRRPVLTAEPSIC-TRALQPNDKFLIFASDGLWEHLTNQEAVDIV 304
+ +++ EP + + +D+F+I A DG+W+ + N+E D V
Sbjct: 211 TEQ-LVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFV 254
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 95/232 (40%), Gaps = 32/232 (13%)
Query: 81 DAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILR---SAFSATEDGFLTL 137
+ F GV++G+ G + F+ L L+ D+ R AF E FL
Sbjct: 63 NCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLES 122
Query: 138 VRRTCGIKPVIA-----------AIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKI 186
+ K + + G+ +V V+ LYVANVG +RA++ G
Sbjct: 123 IDDALAEKASLQLERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQ 182
Query: 187 VAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEF 246
V QL +DH E+ L L D I KQ V I G + +R IGD +K
Sbjct: 183 VT-QLNVDHTTENEDELFRLSQLGLDAGKI---KQ-VGIICGQ-ESTRRIGDYKVKYGYT 236
Query: 247 SLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPND---KFLIFASDGLWEHL 295
+D L +P++ AEP I QP D FL+ S+GL++ L
Sbjct: 237 DIDL------LSAAKSKPII-AEPEI--HGAQPLDGVTGFLVLMSEGLYKAL 279
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 95/251 (37%), Gaps = 51/251 (20%)
Query: 81 DAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILR---SAFSATEDGFLTL 137
+ F GV++G+ G + F+ L L+ D+ R AF E FL
Sbjct: 63 NCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLES 122
Query: 138 VRRTCGIKPVIAAI------------------------------GSCCLVGVIWKGTLYV 167
+ K + + G+ +V V+ LYV
Sbjct: 123 IDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYV 182
Query: 168 ANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIK 227
ANVG +RA++ G V QL +DH E+ L L D I KQ V I
Sbjct: 183 ANVGTNRALLCKSTVDGLQVT-QLNVDHTTENEDELFRLSQLGLDAGKI---KQ-VGIIC 237
Query: 228 GLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPND---KFL 284
G + +R IGD +K +D L +P++ AEP I QP D FL
Sbjct: 238 GQ-ESTRRIGDYKVKYGYTDID------LLSAAKSKPII-AEPEI--HGAQPLDGVTGFL 287
Query: 285 IFASDGLWEHL 295
+ S+GL++ L
Sbjct: 288 VLMSEGLYKAL 298
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 95/251 (37%), Gaps = 51/251 (20%)
Query: 81 DAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILR---SAFSATEDGFLTL 137
+ F GV++G+ G + F+ L L+ D+ R AF E FL
Sbjct: 61 NCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLES 120
Query: 138 VRRTCGIKPVIAAI------------------------------GSCCLVGVIWKGTLYV 167
+ K + + G+ +V V+ LYV
Sbjct: 121 IDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYV 180
Query: 168 ANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIK 227
ANVG +RA++ G V QL +DH E+ L L D I KQ V I
Sbjct: 181 ANVGTNRALLCKSTVDGLQVT-QLNVDHTTENEDELFRLSQLGLDAGKI---KQ-VGIIC 235
Query: 228 GLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPND---KFL 284
G + +R IGD +K +D L +P++ AEP I QP D FL
Sbjct: 236 GQ-ESTRRIGDYKVKYGYTDID------LLSAAKSKPII-AEPEI--HGAQPLDGVTGFL 285
Query: 285 IFASDGLWEHL 295
+ S+GL++ L
Sbjct: 286 VLMSEGLYKAL 296
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase
Kinase Kinase 7 Interacting Protein 1 From Anopheles
Gambiae
Length = 358
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 17/147 (11%)
Query: 150 AIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSL 209
++GS ++ +I + LY+ N+G+ RA++ + + QL++DHN E L L
Sbjct: 152 SVGSSAVLALIHRSHLYLGNIGNCRALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLFRL 211
Query: 210 HPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAE 269
+M Q + + +R IG+ YL + + D +F EP+ E
Sbjct: 212 G-------LMAQNFEGVP--LYSTRCIGN-YLGKAGYK-DCNFLSSATAEPV-----IFE 255
Query: 270 PSICTR-ALQPNDKFLIFASDGLWEHL 295
P I + P +FL+ S GL L
Sbjct: 256 PEIVGGIQITPACRFLVLMSSGLCRAL 282
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 107/265 (40%), Gaps = 49/265 (18%)
Query: 75 QVETGRD--AFFVGVYDGHGGPEASRFIRDHLFRHL------------MRFAREGGTISE 120
Q+ GRD AFF GV+DG G AS ++D + L +R + E
Sbjct: 45 QLVPGRDDCAFF-GVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEXLRSDVPATEVDE 103
Query: 121 DILRSAFSATEDGFLT----LVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAV 176
+ + A +D + LV+ + A+ S + V+ KG + V ++GDSR
Sbjct: 104 KLPQLLDQAVDDXYKNADNELVKXCEQLNKDYAS--STSVTAVLAKGFVAVGHLGDSRIA 161
Query: 177 IGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQ-VSRS 235
G +G + E LT+DH PD H K + R G ++ +
Sbjct: 162 XGVETPNG-LNCEFLTVDHK--------------PDXPH---EKLRIXRNGGSVEYLHNH 203
Query: 236 IGDAYLKRPEFSLDPS---------FPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIF 286
+++ +FS S + R + ++ L+ +P + + P + I
Sbjct: 204 NNKPFIRGGDFSFRKSRGEQPXQLQYSRAFGGKDLKXYGLSNQPDVRVVRVTPQHRVXIL 263
Query: 287 ASDGLWEHLTNQEAVDIVYNCPRAG 311
A+DGLW+ + +AV+I + G
Sbjct: 264 ATDGLWDVXSAAQAVEIAXQARQEG 288
>pdb|2J82|A Chain A, Structural Analysis Of The Pp2c Family Phosphatase Tppha
From Thermosynechococcus Elongatus
pdb|2J86|A Chain A, Structural Analysis Of The Pp2c Family Phosphatase Tppha
Of Thermosynechococcus Elongatus
pdb|2J86|B Chain B, Structural Analysis Of The Pp2c Family Phosphatase Tppha
Of Thermosynechococcus Elongatus
Length = 240
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 93/235 (39%), Gaps = 61/235 (25%)
Query: 77 ETGRDAFFVG--------VYDG----HGGPEASRFIRDHLFRHLMRFAREGGTISEDILR 124
++ +DAF++ V DG GG EASR DH+ ++L + +LR
Sbjct: 14 KSNQDAFYIDEKHQRFFIVADGMGGHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLR 73
Query: 125 SAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVI-WKGT-LYVANVGDSRAVIGSLGK 182
AF A + R+ A +G+ +V ++ KG + A+VGDSR + +
Sbjct: 74 QAFLAANHAIVEQQRQNSA----RADMGTTAVVILLDEKGDRAWCAHVGDSR-----IYR 124
Query: 183 SGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLK 242
K +Q+T DH + V +L SL I +Q WR
Sbjct: 125 WRKDQLQQITSDHTWIAQAV--QLGSL-----TIEQARQHPWR----------------- 160
Query: 243 RPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTN 297
L R L + +P+ L+P D+ L+ SDGL E LT+
Sbjct: 161 ---HVLSQCLGREDLSQIDIQPI----------DLEPGDR-LLLCSDGLTEELTD 201
>pdb|2XZV|A Chain A, The Cyanobacterial Pp2c-Like Phosphatase Tppha Requires
Three Metals In The Catalytic Center For Efficient
Catalysis
Length = 240
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 23/141 (16%)
Query: 77 ETGRDAFFVG--------VYDG----HGGPEASRFIRDHLFRHLMRFAREGGTISEDILR 124
++ +DAF++ V DG GG EASR DH+ ++L + +LR
Sbjct: 14 KSNQDAFYIDEKHQRFFIVADGMGGHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLR 73
Query: 125 SAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVI-WKGT-LYVANVGDSRAVIGSLGK 182
AF A + R+ A +G+ +V ++ KG + A+VGDSR + +
Sbjct: 74 QAFLAANHAIVEQQRQNSA----RADMGTTAVVILLDEKGDRAWCAHVGDSR-----IYR 124
Query: 183 SGKIVAEQLTMDHNACMEEVR 203
K +Q+T DH + V+
Sbjct: 125 WRKDQLQQITSDHTWIAQAVQ 145
>pdb|2BTV|A Chain A, Atomic Model For Bluetongue Virus (Btv) Core
pdb|2BTV|B Chain B, Atomic Model For Bluetongue Virus (Btv) Core
Length = 901
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 92 GGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFLTLV 138
G + + R L H++RFAR I+ED L S FS +D F L+
Sbjct: 508 GKDSEAAYFRSMLPFHMVRFARINQIINED-LHSVFSLPDDMFNALL 553
>pdb|2Y09|A Chain A, The Cyanobacterial Pp2c-Like Phosphatase Tppha Requires
Three Metals In The Catalytic Center For Efficient
Catalysis
Length = 240
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 93/235 (39%), Gaps = 61/235 (25%)
Query: 77 ETGRDAFFVG--------VYDG----HGGPEASRFIRDHLFRHLMRFAREGGTISEDILR 124
++ +DAF++ V DG GG EASR DH+ ++L + +LR
Sbjct: 14 KSNQDAFYIDEKHQRFFIVADGMGGHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLR 73
Query: 125 SAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVI-WKGT-LYVANVGDSRAVIGSLGK 182
AF A + R+ A +G+ +V ++ KG + A+VG SR + +
Sbjct: 74 QAFLAANHAIVEQQRQNSA----RADMGTTAVVILLDEKGDRAWCAHVGASR-----IYR 124
Query: 183 SGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLK 242
K +Q+T DH + V +L SL + + +Q WR
Sbjct: 125 WRKDQLQQITSDHTWIAQAV--QLGSLTIEQA-----RQHPWR----------------- 160
Query: 243 RPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTN 297
L R L + +P+ L+P D+ L+ SDGL E LT+
Sbjct: 161 ---HVLSQCLGREDLSQIDIQPI----------DLEPGDR-LLLCSDGLTEELTD 201
>pdb|2AJ6|A Chain A, Crystal Structure Of A Putative Gnat Family
Acetyltransferase (Mw0638) From Staphylococcus Aureus
Subsp. Aureus At 1.63 A Resolution
Length = 159
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 272 ICTRALQPNDKFLIFASDG-----LWEHLTNQEA---VDIVYNCPR 309
IC+R NDK I+ ++G +W H +N+++ ++++Y P+
Sbjct: 56 ICSRLEHTNDKIYIYENEGQLIAFIWGHFSNEKSXVNIELLYVEPQ 101
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.140 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,064,934
Number of Sequences: 62578
Number of extensions: 428596
Number of successful extensions: 1207
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1125
Number of HSP's gapped (non-prelim): 41
length of query: 390
length of database: 14,973,337
effective HSP length: 101
effective length of query: 289
effective length of database: 8,652,959
effective search space: 2500705151
effective search space used: 2500705151
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 52 (24.6 bits)