Query 016380
Match_columns 390
No_of_seqs 227 out of 1745
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 06:20:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016380.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016380hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0700 Protein phosphatase 2C 100.0 6.4E-73 1.4E-77 548.4 23.9 326 1-336 17-390 (390)
2 KOG0698 Serine/threonine prote 100.0 2.7E-45 5.8E-50 360.8 27.1 249 60-364 43-310 (330)
3 PLN03145 Protein phosphatase 2 100.0 3E-44 6.5E-49 356.1 26.7 241 66-360 75-332 (365)
4 PF00481 PP2C: Protein phospha 100.0 1.1E-43 2.3E-48 337.5 18.0 227 65-325 9-250 (254)
5 PTZ00224 protein phosphatase 2 100.0 6.8E-42 1.5E-46 340.5 26.6 244 56-361 24-274 (381)
6 KOG0697 Protein phosphatase 1B 100.0 8.1E-42 1.8E-46 314.8 21.2 253 55-360 23-293 (379)
7 COG0631 PTC1 Serine/threonine 100.0 5.7E-39 1.2E-43 306.4 20.9 232 60-361 15-255 (262)
8 KOG0699 Serine/threonine prote 100.0 3.9E-36 8.5E-41 285.7 19.2 176 149-363 328-508 (542)
9 cd00143 PP2Cc Serine/threonine 100.0 4E-34 8.6E-39 268.8 25.3 231 67-357 12-254 (254)
10 smart00332 PP2Cc Serine/threon 100.0 2.1E-33 4.6E-38 264.8 24.8 230 66-355 16-255 (255)
11 PRK14559 putative protein seri 100.0 5E-33 1.1E-37 291.5 24.8 226 67-360 387-637 (645)
12 KOG1323 Serine/threonine phosp 100.0 2.4E-27 5.1E-32 223.9 20.7 242 81-360 143-489 (493)
13 KOG1379 Serine/threonine prote 99.9 1.2E-23 2.7E-28 198.8 21.1 220 70-357 91-330 (330)
14 KOG0618 Serine/threonine phosp 99.9 4.5E-21 9.8E-26 201.9 17.8 217 81-362 550-776 (1081)
15 PF13672 PP2C_2: Protein phosp 99.8 1.5E-17 3.2E-22 153.3 14.8 183 65-307 7-194 (212)
16 smart00331 PP2C_SIG Sigma fact 99.7 1.2E-15 2.5E-20 138.5 19.8 172 67-320 14-191 (193)
17 TIGR02865 spore_II_E stage II 99.5 4.6E-12 1E-16 137.4 21.5 190 66-357 563-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.4 7.3E-11 1.6E-15 106.7 19.9 179 81-358 3-193 (193)
19 COG2208 RsbU Serine phosphatas 98.3 0.00012 2.6E-09 73.5 21.0 189 71-358 163-366 (367)
20 PRK10693 response regulator of 56.0 1.7E+02 0.0036 28.3 11.6 97 70-177 150-253 (303)
21 PF09436 DUF2016: Domain of un 37.2 21 0.00047 27.2 1.5 19 279-298 26-44 (72)
22 PF01436 NHL: NHL repeat; Int 26.5 1.3E+02 0.0029 18.0 3.6 21 157-177 7-27 (28)
23 PRK06369 nac nascent polypepti 25.0 2.3E+02 0.005 23.7 5.8 44 264-307 37-87 (115)
24 COG2168 DsrH Uncharacterized c 24.9 61 0.0013 26.2 2.3 37 271-308 16-52 (96)
25 COG3700 AphA Acid phosphatase 24.8 93 0.002 28.3 3.6 43 280-323 71-129 (237)
No 1
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-73 Score=548.44 Aligned_cols=326 Identities=50% Similarity=0.810 Sum_probs=297.1
Q ss_pred ChHHHHHHHHHhhchhhhhhccccCCCCCCCcCCCCCCCCCCCCceeeccCCCCccCccceeeeccCccccccceeee--
Q 016380 1 MLSWLARITMACWRSVRRYVRMNKDNFNYNDIDISDSDSSHQDSLLWCKDLEKHSYGDFSFAVVQANEVIEDHSQVET-- 78 (390)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~w~~~~~~~~~g~~s~~~~~~~~~~ED~~~v~~-- 78 (390)
|.+..+++.+.|++|..+....... .+++...+.++++|+++...+..|++++++.++|+.++|+..++.
T Consensus 17 ~~~~~~~~~~s~~~p~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~~n~~q~a~~~~~edr 88 (390)
T KOG0700|consen 17 MKSTPMRLKRSCLRPIRRGESSSRS--------GSDSSGNSVDGLLWYKDRSEHSFGDFSMAVLQANNLQEAQGKAEEDR 88 (390)
T ss_pred hccccchhhhhccCCCccccccccc--------cccCCCCCcccccccccccccCcccchhhhhhhhhhhhhcCCcccCc
Confidence 5567789999999998876544321 011112367999999999999999999999999987888877766
Q ss_pred -------CCCeEEEEEEcCCChhHHHHHHHHHHHHHHHH------------HHhh--------------------C-CCc
Q 016380 79 -------GRDAFFVGVYDGHGGPEASRFIRDHLFRHLMR------------FARE--------------------G-GTI 118 (390)
Q Consensus 79 -------~~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~------------~~~~--------------------~-~~~ 118 (390)
.+++.|+||||||||+++++|++++|+.++.. +..+ . ...
T Consensus 89 v~~~~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (390)
T KOG0700|consen 89 VSVAVSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGD 168 (390)
T ss_pred ceeeeeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchh
Confidence 55899999999999999999999999999983 2222 1 357
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCceEEEEEEEcCeEEEEEeCCceEEEEEeCCCCc-eeEEecCCCCCC
Q 016380 119 SEDILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGK-IVAEQLTMDHNA 197 (390)
Q Consensus 119 ~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~GsT~~v~li~~~~L~vAnvGDSRavl~r~~~~~~-~~~~~LT~dH~~ 197 (390)
+.++|.+||.+++++|+..+.+.+...|+.+.+||||+|++++++.|||||+|||||||++..+.+. +.+.|||.||+.
T Consensus 169 v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~ 248 (390)
T KOG0700|consen 169 VLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNA 248 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhcc
Confidence 7899999999999999999999999999999999999999999999999999999999999987776 799999999999
Q ss_pred CCHHHHHHHHhcCCCCCCeEEEeCCeeeeCCcccccccccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEec
Q 016380 198 CMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRAL 277 (390)
Q Consensus 198 ~~~~er~ri~~~~p~~~~~v~~~~g~~rv~G~l~vsRsiGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L 277 (390)
+++.|++||+..||++++++++++ |||+|.|++||||||.+||+++++++|++++|++|.++++|+|+++|+|+.++|
T Consensus 249 ~ne~Ev~Rir~eHPdd~~~vv~~~--~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL 326 (390)
T KOG0700|consen 249 SNEDEVRRIRSEHPDDPHIVVNKH--WRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKL 326 (390)
T ss_pred ccHHHHHHHHHhCCCCcceEeecc--ceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEc
Confidence 999999999999999999999998 999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEcCCCcccCCHHHHHHHHHc-----CChhHHHHHHHHHHHHHHHHhccccchhhh
Q 016380 278 QPNDKFLIFASDGLWEHLTNQEAVDIVYN-----CPRAGVARRLLKTALNAAAKKRQMGYDELK 336 (390)
Q Consensus 278 ~~~D~fLILaSDGLwd~ls~~eiv~iv~~-----~~~~~~A~~Lv~~Al~~~a~~~~~~~~~l~ 336 (390)
+|.|+|||||||||||+|+++|++++|.. .+.+++|++||+.||.+++++++|||++|+
T Consensus 327 ~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~aakk~~~r~s~ll 390 (390)
T KOG0700|consen 327 TPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRAAKKRGMRLSDLL 390 (390)
T ss_pred CCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhhhhhccccHhhcC
Confidence 99999999999999999999999999999 789999999999999999999999999874
No 2
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-45 Score=360.85 Aligned_cols=249 Identities=39% Similarity=0.567 Sum_probs=209.0
Q ss_pred ceeeecc-CccccccceeeeC--------C-CeEEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhCCC--chHHHHHHHH
Q 016380 60 SFAVVQA-NEVIEDHSQVETG--------R-DAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGT--ISEDILRSAF 127 (390)
Q Consensus 60 s~~~~~~-~~~~ED~~~v~~~--------~-~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~--~~~~~l~~a~ 127 (390)
+.+..++ +..|||.+..... . ...||||||||||..+|+|+.++|+..+.+....... ...++++++|
T Consensus 43 ~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~~F 122 (330)
T KOG0698|consen 43 SLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRRAF 122 (330)
T ss_pred EEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHH
Confidence 4444454 5569998754432 1 4799999999999999999999999999986655443 4889999999
Q ss_pred H-HHHHHHHHHHHHhcCCCCcccccCceEEEEEEEcC-eEEEEEeCCceEEEEEeCCCCceeEEecCCCCCCCCHHHHHH
Q 016380 128 S-ATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKG-TLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQE 205 (390)
Q Consensus 128 ~-~~~~~~~~~~~~~~~~~~~~~~~GsT~~v~li~~~-~L~vAnvGDSRavl~r~~~~~~~~~~~LT~dH~~~~~~er~r 205 (390)
. .++.+|+.. ..+...+|||++++++.++ +|||||+|||||||++.++ .+++||.||++..+.|+.|
T Consensus 123 ~~~~D~~~~~~-------~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~----~a~~Ls~DHkP~~~~E~~R 191 (330)
T KOG0698|consen 123 LTKTDSEFLEK-------REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGG----VAVQLSVDHKPDREDERER 191 (330)
T ss_pred HHHHHHHHHhh-------ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCC----eeeeCCCCCCCCcHHHHHH
Confidence 9 699998875 1224568999999999866 9999999999999998753 7999999999999999999
Q ss_pred HHhcCCCCCCeEEEeCCeeeeCCcccccccccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEecCCCCeEEE
Q 016380 206 LRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLI 285 (390)
Q Consensus 206 i~~~~p~~~~~v~~~~g~~rv~G~l~vsRsiGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L~~~D~fLI 285 (390)
|.+. ++.|....++|||.|.|++||+|||..+|. ++|+++|++....+...|+|||
T Consensus 192 I~~~----GG~v~~~~~~~Rv~G~LavsRa~GD~~~k~--------------------~~v~a~Pei~~~~~~~~deFLi 247 (330)
T KOG0698|consen 192 IEAA----GGRVSNWGGVWRVNGVLAVSRAFGDVELKS--------------------QGVIAEPEIQQVKINSDDEFLI 247 (330)
T ss_pred HHHc----CCEEEEcCCcceEeceEEEeeecCCHHhcC--------------------CcEecCCceEEEEcCCCCcEEE
Confidence 9987 355666666899999999999999999885 4589999999999999999999
Q ss_pred EEcCCCcccCCHHHHHHHHHcC-----ChhHHHHHHHHHHHHHHHHhccccchhhhhcccCCCCccCCceEEEEEEcCCc
Q 016380 286 FASDGLWEHLTNQEAVDIVYNC-----PRAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIFIDHA 360 (390)
Q Consensus 286 LaSDGLwd~ls~~eiv~iv~~~-----~~~~~A~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~rr~~~DniTvIVv~l~~~ 360 (390)
||||||||+|+++|++++|+.. ....+++.|.+.|+. |++.||||||||+|.+.
T Consensus 248 LasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~~l~~~a~~---------------------~~s~DnitvvvV~l~~~ 306 (330)
T KOG0698|consen 248 LASDGIWDVVSNQEAVDLVRDELASISSPLAAAKLLATEALS---------------------RGSKDNITVVVVRLKSS 306 (330)
T ss_pred EeCCchhcccChHHHHHHHHHHhhccccHHHHHHHHHHHHhh---------------------cCCCCCeEEEEEEecCc
Confidence 9999999999999999999984 356667777777765 44699999999999998
Q ss_pred ccCC
Q 016380 361 LLGN 364 (390)
Q Consensus 361 ~~~~ 364 (390)
....
T Consensus 307 ~~~~ 310 (330)
T KOG0698|consen 307 PKSP 310 (330)
T ss_pred cccc
Confidence 6543
No 3
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=3e-44 Score=356.11 Aligned_cols=241 Identities=29% Similarity=0.428 Sum_probs=195.0
Q ss_pred cCccccccceeeeC------------CCeEEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHH
Q 016380 66 ANEVIEDHSQVETG------------RDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDG 133 (390)
Q Consensus 66 ~~~~~ED~~~v~~~------------~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~ 133 (390)
.+..|||++.+... ....||||||||||+.+++|++++|++.+.+... ......++|+++|..++++
T Consensus 75 ~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~-~~~~~~~al~~af~~~d~~ 153 (365)
T PLN03145 75 SRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDED-FPREIEKVVSSAFLQTDTA 153 (365)
T ss_pred CCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhc-cchhHHHHHHHHHHHHhHH
Confidence 37778998765331 1358999999999999999999999999886322 2234678899999999999
Q ss_pred HHHHHHHhcCCCCcccccCceEEEEEEEcCeEEEEEeCCceEEEEEeCCCCceeEEecCCCCCCCCHHHHHHHHhcCCCC
Q 016380 134 FLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDD 213 (390)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~GsT~~v~li~~~~L~vAnvGDSRavl~r~~~~~~~~~~~LT~dH~~~~~~er~ri~~~~p~~ 213 (390)
|.+... .. ....+|||+++++|.++.|||||+||||||+++.+ .+++||.||++.++.|++||.+.+.
T Consensus 154 ~~~~~~----~~-~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g-----~~~~LT~DH~~~~~~E~~RI~~~Gg-- 221 (365)
T PLN03145 154 FAEACS----LD-ASLASGTTALAALVVGRSLVVANAGDCRAVLCRRG-----KAIEMSRDHKPMCSKERKRIEASGG-- 221 (365)
T ss_pred HHhhhc----cc-cCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCC-----eEEEecCCCCCCCHHHHHHHHHcCC--
Confidence 876422 11 12358999999999999999999999999999987 7999999999999999999987642
Q ss_pred CCeEEEeCCeeeeCCcccccccccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEecCCCCeEEEEEcCCCcc
Q 016380 214 SHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWE 293 (390)
Q Consensus 214 ~~~v~~~~g~~rv~G~l~vsRsiGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L~~~D~fLILaSDGLwd 293 (390)
.+. .| ++.|.+++||+|||..+|.... ...+.++++|++..++|+++|.|||||||||||
T Consensus 222 --~v~--~g--~v~g~l~vTRalGD~~~k~~k~--------------~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwd 281 (365)
T PLN03145 222 --YVY--DG--YLNGQLNVARALGDWHMEGMKG--------------SDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWD 281 (365)
T ss_pred --cee--cc--eECCcccccccccccccccccc--------------ccCCCcceEEEEEEEECCCCCEEEEEeCCcccc
Confidence 221 22 7889999999999998774210 011236899999999999999999999999999
Q ss_pred cCCHHHHHHHHHc-----CChhHHHHHHHHHHHHHHHHhccccchhhhhcccCCCCccCCceEEEEEEcCCc
Q 016380 294 HLTNQEAVDIVYN-----CPRAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIFIDHA 360 (390)
Q Consensus 294 ~ls~~eiv~iv~~-----~~~~~~A~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~rr~~~DniTvIVv~l~~~ 360 (390)
+|+++++++++.. ..++.+|++|++.|+.. ++.||||||||+|+..
T Consensus 282 vls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~r---------------------gs~DNITvIVV~l~~~ 332 (365)
T PLN03145 282 VFRSQNAVDFARRRLQEHNDPVMCSKELVDEALKR---------------------KSGDNLAVVVVCFQSQ 332 (365)
T ss_pred CcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC---------------------CCCCCEEEEEEEeecC
Confidence 9999999877753 24778899999999864 3589999999999984
No 4
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=1.1e-43 Score=337.48 Aligned_cols=227 Identities=35% Similarity=0.514 Sum_probs=184.7
Q ss_pred ccCccccccceeee-------CCCeEEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhCCC-chHHHHHHHHHH-HHHHHH
Q 016380 65 QANEVIEDHSQVET-------GRDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGT-ISEDILRSAFSA-TEDGFL 135 (390)
Q Consensus 65 ~~~~~~ED~~~v~~-------~~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~-~~~~~l~~a~~~-~~~~~~ 135 (390)
+.+..|||.+.+.. .....+|||||||||.++++|++++++..+.+....... ...++|..+|.+ +++.+.
T Consensus 9 g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~~~~~~~~~~ 88 (254)
T PF00481_consen 9 GVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAFLAFTDESLY 88 (254)
T ss_dssp CTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccceeeeccccccc
Confidence 45677899987665 236899999999999999999999999988886665554 688999999999 888887
Q ss_pred HHHHHhcCCCCcccccCceEEEEEEEcCeEEEEEeCCceEEEEEeCCCCceeEE-ecCCCCCCCCHHHHHHHHhcCCCCC
Q 016380 136 TLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAE-QLTMDHNACMEEVRQELRSLHPDDS 214 (390)
Q Consensus 136 ~~~~~~~~~~~~~~~~GsT~~v~li~~~~L~vAnvGDSRavl~r~~~~~~~~~~-~LT~dH~~~~~~er~ri~~~~p~~~ 214 (390)
..... . ....+||||++++|.+++|||||+|||||||++.+ ... +||.||++.++.|++||.+.++..
T Consensus 89 ~~~~~----~-~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~-----~~~~~Lt~dH~~~~~~E~~RI~~~gg~v- 157 (254)
T PF00481_consen 89 SDSEN----N-ESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNG-----GIIKQLTRDHKPSNPDERERIRKAGGRV- 157 (254)
T ss_dssp HHHHH----H-THTTSEEEEEEEEEETTEEEEEEESS-EEEEEETT-----EEEEESS---STTSHHHHHHHHHTT-GE-
T ss_pred ccccc----c-ccccccccccccccccceeEEEeeeeeeeeeeecc-----ccccccccccccchhhccceeecccccc-
Confidence 74322 1 23568999999999999999999999999999998 455 999999999999999999986432
Q ss_pred CeEEEeCCeeeeCCcccccccccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEecCCCCeEEEEEcCCCccc
Q 016380 215 HIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEH 294 (390)
Q Consensus 215 ~~v~~~~g~~rv~G~l~vsRsiGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L~~~D~fLILaSDGLwd~ 294 (390)
.. .||+.|.|++||||||..+|.++ +++|+++|++..++++++|.|||||||||||+
T Consensus 158 ---~~---~~rv~g~l~~sRalGd~~~k~~~-----------------~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~ 214 (254)
T PF00481_consen 158 ---SE---NGRVNGVLAVSRALGDFDLKPPG-----------------KPGVIAEPDISEVDLTPDDEFLVLASDGLWDV 214 (254)
T ss_dssp ---EE---TEEETTTBSSSB-EE-GGGTTCT-----------------SSSSB---EEEEEEEBTTEEEEEEE-HHHHTT
T ss_pred ---cc---chhhhhccccccccccccccccc-----------------cceeeeecccccccccccceEEEEEccccccc
Confidence 21 57999999999999999988643 46799999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCC-----hhHHHHHHHHHHHHHHH
Q 016380 295 LTNQEAVDIVYNCP-----RAGVARRLLKTALNAAA 325 (390)
Q Consensus 295 ls~~eiv~iv~~~~-----~~~~A~~Lv~~Al~~~a 325 (390)
|+++|+++++.+.. ++.+|++|++.|++.+.
T Consensus 215 l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~gs 250 (254)
T PF00481_consen 215 LSNEEIVDIVRESLNSGRSPQEAAEKLVDEAIARGS 250 (254)
T ss_dssp SHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTTH
T ss_pred CCHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCC
Confidence 99999999999863 57899999999998664
No 5
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=6.8e-42 Score=340.52 Aligned_cols=244 Identities=26% Similarity=0.316 Sum_probs=196.6
Q ss_pred cCccceeeeccCccccccceeeeCCCeEEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHH
Q 016380 56 YGDFSFAVVQANEVIEDHSQVETGRDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFL 135 (390)
Q Consensus 56 ~g~~s~~~~~~~~~~ED~~~v~~~~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~~~ 135 (390)
+|..++.+ .+..|||++.+...+...||||||||||.++|+|++++|...+.+. ......+.|+++|..++++|.
T Consensus 24 ~g~~s~~G--~R~~nED~~~v~~~~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~---~~~~~~~~l~~a~~~~d~~i~ 98 (381)
T PTZ00224 24 CASACVNG--YRESMEDAHLLYLTDDWGFFGVFDGHVNDECSQYLARAWPQALEKE---PEPMTDERMEELCLEIDEEWM 98 (381)
T ss_pred EEEEeCCC--CCCCCCCeeEeccCCCceEEEEEeCCCcHHHHHHHHHHHHHHHHhc---cccccHHHHHHHHHHHHHHHH
Confidence 34334443 3666899987665566689999999999999999999999877542 223345679999999999987
Q ss_pred HHHHHhcCCCCcccccCceEEEEEEE-cCeEEEEEeCCceEEEEEeCCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCC
Q 016380 136 TLVRRTCGIKPVIAAIGSCCLVGVIW-KGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDS 214 (390)
Q Consensus 136 ~~~~~~~~~~~~~~~~GsT~~v~li~-~~~L~vAnvGDSRavl~r~~~~~~~~~~~LT~dH~~~~~~er~ri~~~~p~~~ 214 (390)
+.. ..+|||+++++|. +.++||||+||||+|++|.+ .+++||.||++.++.|+.||...+.
T Consensus 99 ~~~----------~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g-----~~~~LT~DH~~~~~~E~~RI~~~gg--- 160 (381)
T PTZ00224 99 DSG----------REGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDG-----KLVFATEDHKPNNPGERQRIEACGG--- 160 (381)
T ss_pred hcc----------cCCCCeEEEEEEEECCEEEEEEcccceEEEEECC-----EEEEcccCCCCCCHHHHhHHHHccC---
Confidence 531 1359999988886 57999999999999999987 7999999999999999999986532
Q ss_pred CeEEEeCCeeeeCCcccccccccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEecCCCCeEEEEEcCCCcc-
Q 016380 215 HIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWE- 293 (390)
Q Consensus 215 ~~v~~~~g~~rv~G~l~vsRsiGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L~~~D~fLILaSDGLwd- 293 (390)
.+. .+|++|.+++||+|||..+|..+. .+...+.|+++|++..++++++| |||||||||||
T Consensus 161 -~v~----~~Rv~G~l~vTRalGd~~~K~~~~------------~~~~~~~v~~~Pdi~~~~l~~~D-~llLaSDGL~d~ 222 (381)
T PTZ00224 161 -RVV----SNRVDGDLAVSRAFGDRSFKVKGT------------GDYLEQKVIAVPDVTHLTCQSND-FIILACDGVFEG 222 (381)
T ss_pred -Eec----cccccCceeeecccCCcccccccc------------cccccCcceeeeEEEEEECCCCC-EEEEECCCcCcC
Confidence 221 138999999999999999887642 12234557899999999999888 79999999999
Q ss_pred cCCHHHHHHHHHc-----CChhHHHHHHHHHHHHHHHHhccccchhhhhcccCCCCccCCceEEEEEEcCCcc
Q 016380 294 HLTNQEAVDIVYN-----CPRAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIFIDHAL 361 (390)
Q Consensus 294 ~ls~~eiv~iv~~-----~~~~~~A~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~rr~~~DniTvIVv~l~~~~ 361 (390)
+|+++|+++++.+ .+.+.+|+.|++.|+.++ +.||||||||+|....
T Consensus 223 ~ls~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~rG---------------------s~DNITvIvV~~~~~~ 274 (381)
T PTZ00224 223 NFSNEEVVAFVKEQLETCDDLAVVAGRVCDEAIRRG---------------------SKDNISCLIVQLKDGA 274 (381)
T ss_pred ccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcC---------------------CCCCEEEEEEEeeCCC
Confidence 8999999999973 347789999999998654 5899999999999853
No 6
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-42 Score=314.79 Aligned_cols=253 Identities=25% Similarity=0.417 Sum_probs=207.1
Q ss_pred ccCccceeeeccC-ccccccceeeeC-----CCeEEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhCC----C---chHH
Q 016380 55 SYGDFSFAVVQAN-EVIEDHSQVETG-----RDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGG----T---ISED 121 (390)
Q Consensus 55 ~~g~~s~~~~~~~-~~~ED~~~v~~~-----~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~----~---~~~~ 121 (390)
.||..|| |++ -.|||++....+ +++.||+|||||.|.+.|.+++++|.+++........ . ..+.
T Consensus 23 ryg~SSM---QGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gsv~~~~~ 99 (379)
T KOG0697|consen 23 RYGVSSM---QGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGSVENVEK 99 (379)
T ss_pred eeeeccc---cchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCcHHHHHh
Confidence 3444444 444 458999866542 3799999999999999999999999999986322111 2 4456
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcccccCceEEEEEEEcCeEEEEEeCCceEEEEEeCCCCceeEEecCCCCCCCCHH
Q 016380 122 ILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEE 201 (390)
Q Consensus 122 ~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~GsT~~v~li~~~~L~vAnvGDSRavl~r~~~~~~~~~~~LT~dH~~~~~~ 201 (390)
-|+..|...++-........ ...-.+|||++.+++...++|++|+||||++|+|++ .+..-|.||++..|.
T Consensus 100 GIrtGFL~iDE~mr~~~~~~----~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng-----~~~f~TqDHKP~~p~ 170 (379)
T KOG0697|consen 100 GIRTGFLSIDEIMRTLSDIS----KGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNG-----EVVFSTQDHKPYLPK 170 (379)
T ss_pred hHhhcceeHHHHHhhhhhhh----cccccCCceEEEEEecCceEEEEecCcchhheecCC-----ceEEeccCCCCCChH
Confidence 67888888877655442221 122348999999999999999999999999999999 789999999999999
Q ss_pred HHHHHHhcCCCCCCeEEEeCCeeeeCCcccccccccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEecCCCC
Q 016380 202 VRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPND 281 (390)
Q Consensus 202 er~ri~~~~p~~~~~v~~~~g~~rv~G~l~vsRsiGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L~~~D 281 (390)
|++||+..+ +-|.++ ||+|.|+|||||||..||... ..+...++|+++|+|+.......|
T Consensus 171 EkeRIqnAG----GSVMIq----RvNGsLAVSRAlGDydyK~v~------------~kgp~eQlVSPEPev~~~~R~eed 230 (379)
T KOG0697|consen 171 EKERIQNAG----GSVMIQ----RVNGSLAVSRALGDYDYKNVP------------GKGPTEQLVSPEPEVYIIERSEED 230 (379)
T ss_pred HHHHHhcCC----CeEEEE----EecceeeeehhccCcccccCC------------CCCchhcccCCCCceEEeeccccC
Confidence 999998764 445555 999999999999999999754 234578999999999999999999
Q ss_pred eEEEEEcCCCcccCCHHHHHHHHHcC-----ChhHHHHHHHHHHHHHHHHhccccchhhhhcccCCCCccCCceEEEEEE
Q 016380 282 KFLIFASDGLWEHLTNQEAVDIVYNC-----PRAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIF 356 (390)
Q Consensus 282 ~fLILaSDGLwd~ls~~eiv~iv~~~-----~~~~~A~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~rr~~~DniTvIVv~ 356 (390)
+||||||||+||+|+++|+.++|+.. +...+|..+++..|-.+ +.||.|+|+|.
T Consensus 231 eFivlACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLhKG---------------------SRDNMsivlvc 289 (379)
T KOG0697|consen 231 EFIVLACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLHKG---------------------SRDNMSIVLVC 289 (379)
T ss_pred cEEEEEccchhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHhcc---------------------CccCceEEEEe
Confidence 99999999999999999999999985 57888999999998765 58999999999
Q ss_pred cCCc
Q 016380 357 IDHA 360 (390)
Q Consensus 357 l~~~ 360 (390)
|-..
T Consensus 290 fp~A 293 (379)
T KOG0697|consen 290 FPGA 293 (379)
T ss_pred cCCC
Confidence 8763
No 7
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-39 Score=306.39 Aligned_cols=232 Identities=29% Similarity=0.414 Sum_probs=191.1
Q ss_pred ceeeeccCccccccceeeeCCC---eEEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhCCC---c--hHHHHHHHHHHHH
Q 016380 60 SFAVVQANEVIEDHSQVETGRD---AFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGT---I--SEDILRSAFSATE 131 (390)
Q Consensus 60 s~~~~~~~~~~ED~~~v~~~~~---~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~---~--~~~~l~~a~~~~~ 131 (390)
+++.++. .|||++.+....+ ..|++|||||||+++++++++.+.+.|.+...+... . ..+.|.+++..++
T Consensus 15 ~~g~~R~--~NeD~~~~~~~~~~~~~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~n 92 (262)
T COG0631 15 DVGTVRK--HNEDAFLIKPNENGNLLLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEELLKEAILKAN 92 (262)
T ss_pred cCCCccC--CCCcceeeccccCCcceeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHH
Confidence 3343444 5699988776443 469999999999999999999999999997666432 1 5799999999999
Q ss_pred HHHHHHHHHhcCCCCcccccCceEEEEEEEcCeEEEEEeCCceEEEEEeCCCCceeEEecCCCCCCCCHHHHHHHHhcCC
Q 016380 132 DGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHP 211 (390)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~GsT~~v~li~~~~L~vAnvGDSRavl~r~~~~~~~~~~~LT~dH~~~~~~er~ri~~~~p 211 (390)
+.+..... .......+|||++++++.++++|+|||||||+|++|++ .++|||.||++.++.+++++...++
T Consensus 93 ~~i~~~~~----~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~-----~~~~lT~DH~~~~~~~~~~~~~~~~ 163 (262)
T COG0631 93 EAIAEEGQ----LNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDG-----ELKQLTEDHSLVNRLEQRGIITPEE 163 (262)
T ss_pred HHHHHhhh----cccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCC-----ceEEeccCCcHHHHHHHhcCCCHHH
Confidence 99888733 33445789999999999999999999999999999998 7999999999999998877543321
Q ss_pred CCCCeEEEeCCeeeeCCcccccccccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEecCCCCeEEEEEcCCC
Q 016380 212 DDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGL 291 (390)
Q Consensus 212 ~~~~~v~~~~g~~rv~G~l~vsRsiGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L~~~D~fLILaSDGL 291 (390)
...+- |.+ ++|||||+.. ..+|++...+++++| |||||||||
T Consensus 164 ~~~~~--------~~~---~ltralG~~~--------------------------~~~p~~~~~~~~~~d-~llL~SDGl 205 (262)
T COG0631 164 ARSHP--------RRN---ALTRALGDFD--------------------------LLEPDITELELEPGD-FLLLCSDGL 205 (262)
T ss_pred HHhCc--------cch---hhhhhcCCCc--------------------------ccceeEEEEEcCCCC-EEEEECCCC
Confidence 11110 111 5999999985 388999999999995 788999999
Q ss_pred cccCCHHHHHHHHHc-CChhHHHHHHHHHHHHHHHHhccccchhhhhcccCCCCccCCceEEEEEEcCCcc
Q 016380 292 WEHLTNQEAVDIVYN-CPRAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIFIDHAL 361 (390)
Q Consensus 292 wd~ls~~eiv~iv~~-~~~~~~A~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~rr~~~DniTvIVv~l~~~~ 361 (390)
||.++++++++++.. ..++.++++|++.|++.+ .+||||||+|.+....
T Consensus 206 ~d~v~~~~i~~il~~~~~~~~~~~~li~~a~~~g---------------------~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 206 WDVVSDDEIVDILKNSETPQEAADKLIELALEGG---------------------GPDNITVVLVRLNGEG 255 (262)
T ss_pred ccCcCHHHHHHHHhcCCCHHHHHHHHHHHHHhcC---------------------CCCceEEEEEEeeccc
Confidence 999999999999995 569999999999999854 4999999999988764
No 8
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-36 Score=285.66 Aligned_cols=176 Identities=28% Similarity=0.467 Sum_probs=148.8
Q ss_pred cccCceEEEEEEEcCeEEEEEeCCceEEEEEeCCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCeEEEeCCeeeeCC
Q 016380 149 AAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKG 228 (390)
Q Consensus 149 ~~~GsT~~v~li~~~~L~vAnvGDSRavl~r~~~~~~~~~~~LT~dH~~~~~~er~ri~~~~p~~~~~v~~~~g~~rv~G 228 (390)
..+|||++||+|.+.+|||||.||||||++|.| +++.+|.||++..+.|-.||.+.+. .|.+ .| ||+|
T Consensus 328 ~DSGtTAvVcLv~g~~liVANAGDSRcV~sr~G-----kAvdmS~DHKPEDevE~~RI~~AGG----~vtl-DG--RVNG 395 (542)
T KOG0699|consen 328 EDSGTTAVVCLVGGDKLIVANAGDSRCVLSRNG-----KAVDMSVDHKPEDEVETNRIHAAGG----QVTL-DG--RVNG 395 (542)
T ss_pred CCCCceEEEEEecCceEEEecCCCcceEEecCC-----ceeecccCCCcccHHHHHHHHhcCC----eEee-cc--eecC
Confidence 457999999999999999999999999999999 8999999999999999999988742 3333 34 9999
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEecCCCCeEEEEEcCCCcccCCHHHHHHHHHcC-
Q 016380 229 LIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIVYNC- 307 (390)
Q Consensus 229 ~l~vsRsiGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L~~~D~fLILaSDGLwd~ls~~eiv~iv~~~- 307 (390)
.|.+||+|||..||+.. -.|++.++|++-|+|....|+|.|+|+|+||||||.+|+.+|+|++|+..
T Consensus 396 GLNLSRA~GDHaYK~N~------------~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l 463 (542)
T KOG0699|consen 396 GLNLSRAFGDHAYKKNQ------------ELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLL 463 (542)
T ss_pred ccchhhhhhhhhhhccc------------CCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHH
Confidence 99999999999998753 34678999999999999999999999999999999999999999999874
Q ss_pred ----ChhHHHHHHHHHHHHHHHHhccccchhhhhcccCCCCccCCceEEEEEEcCCcccC
Q 016380 308 ----PRAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIFIDHALLG 363 (390)
Q Consensus 308 ----~~~~~A~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~rr~~~DniTvIVv~l~~~~~~ 363 (390)
....++..|.+..|+-.. . | ....-||.|||++.|+.+...
T Consensus 464 ~~n~~ls~iceeL~D~CLAp~T------~--------G-DGTGCDNMT~ii~~Fkrk~~e 508 (542)
T KOG0699|consen 464 AKNSSLSEICEELCDACLAPST------D--------G-DGTGCDNMTVIITTFKRKSKE 508 (542)
T ss_pred hcCchHHHHHHHHHHhhcCCCC------C--------C-CCcCCCcceEEEEEeccchhh
Confidence 256677778777764211 1 1 122379999999999976543
No 9
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=4e-34 Score=268.81 Aligned_cols=231 Identities=40% Similarity=0.558 Sum_probs=192.0
Q ss_pred CccccccceeeeCC---CeEEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhC----CCchHHHHHHHHHHHHHHHHHHHH
Q 016380 67 NEVIEDHSQVETGR---DAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREG----GTISEDILRSAFSATEDGFLTLVR 139 (390)
Q Consensus 67 ~~~~ED~~~v~~~~---~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~----~~~~~~~l~~a~~~~~~~~~~~~~ 139 (390)
+..+||++.+.... +..+|+|||||||+..++++++.+.+.+.+..... .......|+++|..+++.+.....
T Consensus 12 r~~neD~~~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~ 91 (254)
T cd00143 12 RKTNEDAVVIKPNLNNEDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAFLRADEEILEEAQ 91 (254)
T ss_pred CCCCcceEEEeccCCCCCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 44579998887654 67999999999999999999999999998876654 245667899999999999887643
Q ss_pred HhcCCCCcccccCceEEEEEEEcCeEEEEEeCCceEEEEEeCCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCeEEE
Q 016380 140 RTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVM 219 (390)
Q Consensus 140 ~~~~~~~~~~~~GsT~~v~li~~~~L~vAnvGDSRavl~r~~~~~~~~~~~LT~dH~~~~~~er~ri~~~~p~~~~~v~~ 219 (390)
.. .....+|||++++++.++.++++|+||||+|+++.+ ..+++|.||++.++.++.++...++...
T Consensus 92 ~~----~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~-----~~~~lt~dh~~~~~~~~~~i~~~~~~~~----- 157 (254)
T cd00143 92 DE----PDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNG-----EAVQLTKDHKPVNEEERERIEKAGGRVS----- 157 (254)
T ss_pred hc----cCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCC-----ceeEcCCCCCCcChHHHHHHHHcCCcEE-----
Confidence 21 234568999999999999999999999999999988 7999999999999888888887654211
Q ss_pred eCCeeeeCCcccccccccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEec-CCCCeEEEEEcCCCcccCCHH
Q 016380 220 KQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRAL-QPNDKFLIFASDGLWEHLTNQ 298 (390)
Q Consensus 220 ~~g~~rv~G~l~vsRsiGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L-~~~D~fLILaSDGLwd~ls~~ 298 (390)
..+.++...+||+||+..+| |.+.++|++...++ +++| +|||||||||++++++
T Consensus 158 ---~~~~~~~~~~t~~lG~~~~~---------------------~~~~~~~~~~~~~l~~~~d-~ill~SDG~~~~l~~~ 212 (254)
T cd00143 158 ---NGRVPGVLAVTRALGDFDLK---------------------PGVSAEPDVTVVKLTEDDD-FLILASDGLWDVLSNQ 212 (254)
T ss_pred ---eCEEcCceeeccccCCcccc---------------------CCEEcCCeEEEEEeCCCCc-EEEEECCCCeeccChH
Confidence 12555666799999999766 23588999999999 7777 5889999999999999
Q ss_pred HHHHHHHcCC----hhHHHHHHHHHHHHHHHHhccccchhhhhcccCCCCccCCceEEEEEEc
Q 016380 299 EAVDIVYNCP----RAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIFI 357 (390)
Q Consensus 299 eiv~iv~~~~----~~~~A~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~rr~~~DniTvIVv~l 357 (390)
++.+++.... ++.+|++|++.|...+ .+||+|+||++|
T Consensus 213 ~i~~~~~~~~~~~~~~~~a~~l~~~a~~~~---------------------~~Dn~t~i~~~~ 254 (254)
T cd00143 213 EAVDIVRSELAKEDLQEAAQELVDLALRRG---------------------SHDNITVVVVRL 254 (254)
T ss_pred HHHHHHHHHhcccCHHHHHHHHHHHHHhCC---------------------CCCCEEEEEEeC
Confidence 9999998764 7889999999998653 489999999975
No 10
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=2.1e-33 Score=264.76 Aligned_cols=230 Identities=40% Similarity=0.588 Sum_probs=190.3
Q ss_pred cCccccccceeeeC--CCeEEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhCCC---chHHHHHHHHHHHHHHHHHHHHH
Q 016380 66 ANEVIEDHSQVETG--RDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGT---ISEDILRSAFSATEDGFLTLVRR 140 (390)
Q Consensus 66 ~~~~~ED~~~v~~~--~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~---~~~~~l~~a~~~~~~~~~~~~~~ 140 (390)
.+..+||++.+... .+..+++|||||||..+|+++++.+.+.+.+....... .+.+.|++++.++++.+......
T Consensus 16 ~r~~neD~~~~~~~~~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 95 (255)
T smart00332 16 VRKPMEDAHVITPDLSDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKAFLKTDEEILEELES 95 (255)
T ss_pred CCCCCcceEEEeccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHhhhh
Confidence 45567999888776 67899999999999999999999999999876543332 47788999999999998876443
Q ss_pred hcCCCCcccccCceEEEEEEEcCeEEEEEeCCceEEEEEeCCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCeEEEe
Q 016380 141 TCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMK 220 (390)
Q Consensus 141 ~~~~~~~~~~~GsT~~v~li~~~~L~vAnvGDSRavl~r~~~~~~~~~~~LT~dH~~~~~~er~ri~~~~p~~~~~v~~~ 220 (390)
.. ....+|||++++++.++++|++|+||||+|++|.+ ...+||.||++.++.+..++...+.. +.+
T Consensus 96 ~~----~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~-----~~~~lt~dh~~~~~~~~~~i~~~~~~-----~~~ 161 (255)
T smart00332 96 LE----EDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNG-----KAVQLTEDHKPSNEDERARIEAAGGF-----VIN 161 (255)
T ss_pred cc----CCCCCCccEEEEEEECCEEEEEeccCceEEEEeCC-----ceeEcCCCCCCcCHHHHHHHHHcCCE-----EEC
Confidence 22 33568999999999999999999999999999987 68999999999999988888876431 111
Q ss_pred CCeeeeCCcccccccccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEec-CCCCeEEEEEcCCCcccCCHHH
Q 016380 221 QGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRAL-QPNDKFLIFASDGLWEHLTNQE 299 (390)
Q Consensus 221 ~g~~rv~G~l~vsRsiGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L-~~~D~fLILaSDGLwd~ls~~e 299 (390)
++..+...+||++|+..+| |.+.++|++...++ .++| +|||||||||+++++++
T Consensus 162 ---~~~~~~~~lt~~~g~~~~~---------------------~~i~~~p~~~~~~~~~~~d-~ill~SDGv~~~l~~~~ 216 (255)
T smart00332 162 ---GRVNGVLALSRAIGDFFLK---------------------PYVSAEPDVTVVELTEKDD-FLILASDGLWDVLSNQE 216 (255)
T ss_pred ---CeECCeEecccccCCHhhc---------------------CCeEeeeEEEEEEecCCCc-EEEEECCccccCCCHHH
Confidence 2566667899999998755 45789999999996 7777 68899999999999999
Q ss_pred HHHHHHcC----ChhHHHHHHHHHHHHHHHHhccccchhhhhcccCCCCccCCceEEEEE
Q 016380 300 AVDIVYNC----PRAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVI 355 (390)
Q Consensus 300 iv~iv~~~----~~~~~A~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~rr~~~DniTvIVv 355 (390)
+.+++.+. ++..+|++|++.|...+ ..||+|||||
T Consensus 217 i~~~~~~~~~~~~~~~~~~~l~~~a~~~~---------------------~~Dn~T~ivv 255 (255)
T smart00332 217 VVDIVRKHLSKSDPEEAAKRLIDLALARG---------------------SKDNITVIVV 255 (255)
T ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHcC---------------------CCCCeEEEEC
Confidence 99999875 37888999999887642 4899999985
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=5e-33 Score=291.52 Aligned_cols=226 Identities=20% Similarity=0.277 Sum_probs=165.7
Q ss_pred CccccccceeeeC------C------CeEEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhC---CCchHHHHHHHHHHHH
Q 016380 67 NEVIEDHSQVETG------R------DAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREG---GTISEDILRSAFSATE 131 (390)
Q Consensus 67 ~~~~ED~~~v~~~------~------~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~---~~~~~~~l~~a~~~~~ 131 (390)
|..|||++.+... + ...||+|||||||+.+++.|++...+.|.++..+. .....+.|+++|..++
T Consensus 387 R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~~~~~~L~~ai~~AN 466 (645)
T PRK14559 387 RHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDELPDEETIREAIYLAN 466 (645)
T ss_pred CcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHH
Confidence 5567998765431 1 24699999999988866666666666555443321 1134678999999999
Q ss_pred HHHHHHHHHhcCCCCcccccCceEEEEEEEcCeEEEEEeCCceEEEEEeCCCCceeEEecCCCCCCCCHHHHHHH----H
Q 016380 132 DGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQEL----R 207 (390)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~GsT~~v~li~~~~L~vAnvGDSRavl~r~~~~~~~~~~~LT~dH~~~~~~er~ri----~ 207 (390)
+.+.+..... .......+|||++++++.++.+|++||||||+|+++.++ .++|||.||++..+.+++++ .
T Consensus 467 ~~I~~~~~~~--~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g----~l~QLT~DHs~~~~lv~~Gi~~~~a 540 (645)
T PRK14559 467 EAIYDLNQQN--ARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKG----GLEQLTVDHEVGQREIQRGVEPQIA 540 (645)
T ss_pred HHHHHHhhhc--ccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCC----eEEEeCCCCCHHHHHHHhCCCHHHH
Confidence 9998754322 111345699999999999999999999999999986432 79999999998776555432 1
Q ss_pred hcCCCCCCeEEEeCCeeeeCCcccccccccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEecCCCCeEEEEE
Q 016380 208 SLHPDDSHIVVMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFA 287 (390)
Q Consensus 208 ~~~p~~~~~v~~~~g~~rv~G~l~vsRsiGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L~~~D~fLILa 287 (390)
..|| +..++|||||+...+ ..+|++..+.++++| |||||
T Consensus 541 ~~~p----------------~~~~LTrALG~~~~~------------------------~l~Pdi~~~~L~~gD-~lLLC 579 (645)
T PRK14559 541 YARP----------------DAYQLTQALGPRDNS------------------------AIQPDIQFLEIEEDT-LLLLC 579 (645)
T ss_pred hcCc----------------ccceeeeccCCCCCC------------------------cccceEEEEEcCCCC-EEEEE
Confidence 1222 223699999997532 457999999999877 57799
Q ss_pred cCCCccc--CCH---HHHHHHHHcC-ChhHHHHHHHHHHHHHHHHhccccchhhhhcccCCCCccCCceEEEEEEcCCc
Q 016380 288 SDGLWEH--LTN---QEAVDIVYNC-PRAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIFIDHA 360 (390)
Q Consensus 288 SDGLwd~--ls~---~eiv~iv~~~-~~~~~A~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~rr~~~DniTvIVv~l~~~ 360 (390)
||||||+ +.+ +++..++... +...++++|++.|+.++ ++||||||||++...
T Consensus 580 SDGL~D~~~ve~~~~~~l~~il~~~~~l~~aa~~Li~~Al~~g---------------------g~DNITvIvV~l~~~ 637 (645)
T PRK14559 580 SDGLSDNDLLETHWQTHLLPLLSSSANLDQGLNKLIDLANQYN---------------------GHDNITAILVRLKVR 637 (645)
T ss_pred CCCCCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC---------------------CCCcEEEEEEEeccC
Confidence 9999994 554 4456677654 47788999999998654 499999999998643
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=2.4e-27 Score=223.90 Aligned_cols=242 Identities=30% Similarity=0.413 Sum_probs=177.9
Q ss_pred CeEEEEEEcCCChhHHHHHHHHHHHHHHHHHHhh---C------------------------------------CCchHH
Q 016380 81 DAFFVGVYDGHGGPEASRFIRDHLFRHLMRFARE---G------------------------------------GTISED 121 (390)
Q Consensus 81 ~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~---~------------------------------------~~~~~~ 121 (390)
++.+|.+||||.|..+|-.++..+.+++.+.+.+ . +....-
T Consensus 143 ~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LViG 222 (493)
T KOG1323|consen 143 DGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLVIG 222 (493)
T ss_pred cceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhhHH
Confidence 6899999999999999998888888888754320 0 012346
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcccccCceEEEEEEEcCeEEEEEeCCceEEEEEeCCCCceeEEecCCCCCCCCHH
Q 016380 122 ILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEE 201 (390)
Q Consensus 122 ~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~GsT~~v~li~~~~L~vAnvGDSRavl~r~~~~~~~~~~~LT~dH~~~~~~ 201 (390)
+|+.||+..++++...- +.|. ...|||+++++.--++|||||.|||||+|+|++ .++.||.+.++ +.
T Consensus 223 AlEsAFqemDeqiarer-~~~~-----~~GGCtalvvi~llGKlYvaNAGDsRAIlVrnd-----eirplS~efTP--et 289 (493)
T KOG1323|consen 223 ALESAFQEMDEQIARER-QVWR-----LPGGCTALVVIVLLGKLYVANAGDSRAILVRND-----EIRPLSKEFTP--ET 289 (493)
T ss_pred HHHHHHHHHHHHHHHHH-Hhhc-----CCCCceEEEeeeeccceEEccCCCceEEEEecC-----CeeecccccCc--HH
Confidence 78889999988877652 2332 457999999999999999999999999999998 68999999877 45
Q ss_pred HHHHHHhcC----------------CC------CCCeEEEeC----------------------C---eeeeCCcccccc
Q 016380 202 VRQELRSLH----------------PD------DSHIVVMKQ----------------------G---VWRIKGLIQVSR 234 (390)
Q Consensus 202 er~ri~~~~----------------p~------~~~~v~~~~----------------------g---~~rv~G~l~vsR 234 (390)
||||++.+. |. -++-+.+++ | .-|+.+.|.|||
T Consensus 290 ERqRlQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsR 369 (493)
T KOG1323|consen 290 ERQRLQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSR 369 (493)
T ss_pred HHHHHHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheecc
Confidence 677776531 11 011111111 1 126778899999
Q ss_pred cccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEecCC----CCeEEEEEcCCCcccCCHHHHHHHHHcCC--
Q 016380 235 SIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQP----NDKFLIFASDGLWEHLTNQEAVDIVYNCP-- 308 (390)
Q Consensus 235 siGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L~~----~D~fLILaSDGLwd~ls~~eiv~iv~~~~-- 308 (390)
.|||..+|...-+. ..+|++++.|++.+.+|.. .|..+|||||||||+|+++|+..+|++.-
T Consensus 370 GlGDH~Lkv~dsnl------------~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~ 437 (493)
T KOG1323|consen 370 GLGDHHLKVVDSNL------------SIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPS 437 (493)
T ss_pred ccCcceeeeecCCc------------ccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCC
Confidence 99999999776332 1468999999999998874 24479999999999999999999999841
Q ss_pred --------hhHHHHHHHHHHHHHHHHhccccchhhhhcccCC-----CCccCCceEEEEEEcCCc
Q 016380 309 --------RAGVARRLLKTALNAAAKKRQMGYDELKKIDKGD-----RRFYHDDITVVVIFIDHA 360 (390)
Q Consensus 309 --------~~~~A~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~-----rr~~~DniTvIVv~l~~~ 360 (390)
-..+|+.|+..|.... -++|+ +-++.|||||.|+-|...
T Consensus 438 ~dp~Dp~RYt~aaqdlva~arg~~-------------k~rgWr~~n~~lgSgDDIsVfVIPL~~~ 489 (493)
T KOG1323|consen 438 TDPADPSRYTQAAQDLVAAARGQQ-------------KDRGWRMNNGGLGSGDDISVFVIPLKYC 489 (493)
T ss_pred CCCCChhHHHHHHHHHHHHhcCcc-------------CCCceeccCCCcCCCCceEEEEEeccCC
Confidence 1345667766654322 12333 346789999999988753
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.92 E-value=1.2e-23 Score=198.81 Aligned_cols=220 Identities=22% Similarity=0.239 Sum_probs=158.7
Q ss_pred ccccceeeeCCCeEEEEEEcCCChhH-----HHHHHHHHHHHHHHHHHhhC---CCchHHHHHHHHHHHHHHHHHHHHHh
Q 016380 70 IEDHSQVETGRDAFFVGVYDGHGGPE-----ASRFIRDHLFRHLMRFAREG---GTISEDILRSAFSATEDGFLTLVRRT 141 (390)
Q Consensus 70 ~ED~~~v~~~~~~~~~gV~DGhGG~~-----as~~a~~~l~~~l~~~~~~~---~~~~~~~l~~a~~~~~~~~~~~~~~~ 141 (390)
-||++++...+...+.|||||+|||. .+.|..+.+ ....+...+. ...+...|.+|+.++-++
T Consensus 91 GEDa~Fvss~~~~~v~GVADGVGGWa~~GiDpg~fS~eLM-~~ce~~v~~~~~~~~~P~~lL~~ay~~l~~~-------- 161 (330)
T KOG1379|consen 91 GEDAWFVSSNPHAIVMGVADGVGGWAEYGIDPGAFSRELM-SNCERLVQNSDFNPSDPVNLLEKAYAELKSQ-------- 161 (330)
T ss_pred CCcceeeccCcccceEEEccccchHhhcCcCHHHHHHHHH-HHHHHHhcccccCCCChHHHHHHHHHHHhhc--------
Confidence 49999999999999999999999996 555554444 4444433332 246788888888776542
Q ss_pred cCCCCcccccCceEEEEEEE--cCeEEEEEeCCceEEEEEeCCCCceeEEecCC--CCCCCCHHHHHHHHhcCCCCCCeE
Q 016380 142 CGIKPVIAAIGSCCLVGVIW--KGTLYVANVGDSRAVIGSLGKSGKIVAEQLTM--DHNACMEEVRQELRSLHPDDSHIV 217 (390)
Q Consensus 142 ~~~~~~~~~~GsT~~v~li~--~~~L~vAnvGDSRavl~r~~~~~~~~~~~LT~--dH~~~~~~er~ri~~~~p~~~~~v 217 (390)
.. ..-++||++++++. +++||+||+|||...++|+| +..+-|. .|-.+.|... ...|.+
T Consensus 162 --~~--~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G-----~vv~~S~~Q~H~FN~PyQL----s~~p~~---- 224 (330)
T KOG1379|consen 162 --KV--PIVGSSTACILALDRENGKLHTANLGDSGFLVVREG-----KVVFRSPEQQHYFNTPYQL----SSPPEG---- 224 (330)
T ss_pred --CC--CCCCcceeeeeeeecCCCeEEEeeccCcceEEEECC-----EEEEcCchheeccCCceee----ccCCcc----
Confidence 11 23356777777776 88999999999999999998 5555544 3444443200 011110
Q ss_pred EEeCCeeeeCCcccccccccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEecCCCCeEEEEEcCCCcccCCH
Q 016380 218 VMKQGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTN 297 (390)
Q Consensus 218 ~~~~g~~rv~G~l~vsRsiGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L~~~D~fLILaSDGLwd~ls~ 297 (390)
...+++|. .-..+.+.+.++++|. ||+|||||||+|.+
T Consensus 225 --------------~~~~~~d~---------------------------p~~ad~~~~~v~~GDv-IilATDGlfDNl~e 262 (330)
T KOG1379|consen 225 --------------YSSYISDV---------------------------PDSADVTSFDVQKGDV-IILATDGLFDNLPE 262 (330)
T ss_pred --------------ccccccCC---------------------------ccccceEEEeccCCCE-EEEecccccccccH
Confidence 11223332 2345678999999996 88999999999999
Q ss_pred HHHHHHHHcC------ChhHHHHHHHHHHHHHHHHhccccchhhhhcccC--CCCccCCceEEEEEEc
Q 016380 298 QEAVDIVYNC------PRAGVARRLLKTALNAAAKKRQMGYDELKKIDKG--DRRFYHDDITVVVIFI 357 (390)
Q Consensus 298 ~eiv~iv~~~------~~~~~A~~Lv~~Al~~~a~~~~~~~~~l~~~~~~--~rr~~~DniTvIVv~l 357 (390)
++|++|+... .++..|+++++.|.+.+-.+.+.+...+..-+.| .+.+..|||||||..+
T Consensus 263 ~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 263 KEILSILKGLDARGNLDLQVTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred HHHHHHHHHhhccccccHHHHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 9999999874 3688999999999999887778888887777766 4466799999999763
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.86 E-value=4.5e-21 Score=201.87 Aligned_cols=217 Identities=22% Similarity=0.309 Sum_probs=177.5
Q ss_pred CeEEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCceEEEEEE
Q 016380 81 DAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVI 160 (390)
Q Consensus 81 ~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~GsT~~v~li 160 (390)
....||++||-+..+..+++..++..++.+.....+ +..+.|+++|...+.++...- ..-|..++.+.|
T Consensus 550 ~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~-~et~~mr~~fl~~~rklg~~g----------~~lg~~~~~~~i 618 (1081)
T KOG0618|consen 550 PQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYG-NETEQMRNTFLRLNRKLGEEG----------QVLGGSVVLCQI 618 (1081)
T ss_pred CcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhcc-ChHHHHHHHHHHHhhhhhhhh----------ccccchhhheee
Confidence 468999999999999999999999999998666443 445569999999999885431 123444555555
Q ss_pred Ec--------CeEEEEEeCCceEEEEEeCCCCceeEEecCCCC-CCCCHHHHHHHHhcCCCCCCeEEEeCCeeeeCCccc
Q 016380 161 WK--------GTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDH-NACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQ 231 (390)
Q Consensus 161 ~~--------~~L~vAnvGDSRavl~r~~~~~~~~~~~LT~dH-~~~~~~er~ri~~~~p~~~~~v~~~~g~~rv~G~l~ 231 (390)
.. .++.+||+|+|.+++++++ ...++|+-. -...++|-+||...+. ++..+| +++|+..
T Consensus 619 ~~d~~~~asS~~l~~Anvg~c~avls~ng-----~~~p~t~~~~~~v~~eE~~RI~~~~g-----~i~ed~--k~ngvt~ 686 (1081)
T KOG0618|consen 619 VEDSLSPASSKTLFAANVGTCMAVLSRNG-----KPLPTTRSPMLEVDREEYKRIVDSKG-----FITEDN--KLNGVTS 686 (1081)
T ss_pred cccccCcccchhhhHhhhccchhhhhhcC-----CcCcccccccccCCHHHHHHHHHhcC-----eecCCC--eeeceee
Confidence 43 4799999999999999998 455555544 3448888999987642 333333 8999999
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEecCCCCeEEEEEcCCCcccCCHHHHHHHHHcCC-hh
Q 016380 232 VSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDIVYNCP-RA 310 (390)
Q Consensus 232 vsRsiGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L~~~D~fLILaSDGLwd~ls~~eiv~iv~~~~-~~ 310 (390)
.||++|.+++ .|.|-+.|+|....|++.|+|||+|+-+||++|+-++++++|++.. +-
T Consensus 687 ~tR~iG~~~l---------------------~P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~~dpL 745 (1081)
T KOG0618|consen 687 STRAIGPFSL---------------------FPHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNVEDPL 745 (1081)
T ss_pred eeeecccccc---------------------cccccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhcCCchH
Confidence 9999999974 4789999999999999999999999999999999999999999764 77
Q ss_pred HHHHHHHHHHHHHHHHhccccchhhhhcccCCCCccCCceEEEEEEcCCccc
Q 016380 311 GVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIFIDHALL 362 (390)
Q Consensus 311 ~~A~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~rr~~~DniTvIVv~l~~~~~ 362 (390)
.+|++|++.|...|+ +||++|+||+|.....
T Consensus 746 ~AAkKL~d~AqSYgc---------------------~~nv~vlVv~l~~~~~ 776 (1081)
T KOG0618|consen 746 LAAKKLCDLAQSYGC---------------------AENVSVLVVRLNHLEE 776 (1081)
T ss_pred HHHHHHHHHHHhccc---------------------ccCeeEEEEEeecchh
Confidence 889999999999987 9999999999988544
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.75 E-value=1.5e-17 Score=153.28 Aligned_cols=183 Identities=20% Similarity=0.266 Sum_probs=102.3
Q ss_pred ccCccccccceeeeCCCeEEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhCCCchHHH-HHHHHHHHHHHHHHHH---HH
Q 016380 65 QANEVIEDHSQVETGRDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDI-LRSAFSATEDGFLTLV---RR 140 (390)
Q Consensus 65 ~~~~~~ED~~~v~~~~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~-l~~a~~~~~~~~~~~~---~~ 140 (390)
..+..+||++.+...++..+++|+||+||...++.++..+.+.+.+.+.......... ....+..+.+++...+ ..
T Consensus 7 ~~~~~nqD~~~~~~~~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (212)
T PF13672_consen 7 GRGAPNQDAFGIRTDDDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEILSIVRAFQS 86 (212)
T ss_dssp TTSSS--EEEEEE-TCCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHH----H
T ss_pred CCCCCCCCCEEeeeCCCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHhhhhhh
Confidence 3455679999988888888889999999777666666666666655544443322222 3444444444444321 00
Q ss_pred hcCCCCcccccCceEEEEEEEcCeEEEEEeCCceEEEEEeCCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCeEEEe
Q 016380 141 TCGIKPVIAAIGSCCLVGVIWKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMK 220 (390)
Q Consensus 141 ~~~~~~~~~~~GsT~~v~li~~~~L~vAnvGDSRavl~r~~~~~~~~~~~LT~dH~~~~~~er~ri~~~~p~~~~~v~~~ 220 (390)
...........+||++++++.++.++++|+||||+|+....+ ....++.+|+.. ...
T Consensus 87 ~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g----~~~~l~~~~~~~-------~~~------------ 143 (212)
T PF13672_consen 87 AKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNG----EIQQLTDDHSGE-------YPN------------ 143 (212)
T ss_dssp HHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETT----EEEE-S---BHH-------HHH------------
T ss_pred hhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCC----EEEEcCCCccch-------hhh------------
Confidence 000122345679999999999999999999999997665433 788999988621 111
Q ss_pred CCeeeeCCcccccccccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEecCCCCeEEEEEcCCCcccCCHHH-
Q 016380 221 QGVWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQE- 299 (390)
Q Consensus 221 ~g~~rv~G~l~vsRsiGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L~~~D~fLILaSDGLwd~ls~~e- 299 (390)
.++++.... .....++..+++.++|. |+|||||||+.+.+.+
T Consensus 144 -----------~~~~~~~~~-------------------------~~~~~~~~~~~~~~~d~-ilL~SDG~~~~l~~~~~ 186 (212)
T PF13672_consen 144 -----------QTRSLTGDD-------------------------PEPDVQYGSIPLEEGDV-ILLCSDGVWDNLRSYED 186 (212)
T ss_dssp -----------CTTSCCHHC-------------------------CCTETEEEEEE--TT-E-EEEE-HHHHTTS-HHHH
T ss_pred -----------hhhccCccc-------------------------cccCCeEEEEEcCCCCE-EEEECcCccccCCCHHH
Confidence 122333221 02223666778888897 6689999999998765
Q ss_pred HHHHHHcC
Q 016380 300 AVDIVYNC 307 (390)
Q Consensus 300 iv~iv~~~ 307 (390)
+..++.+.
T Consensus 187 ~~~~l~~~ 194 (212)
T PF13672_consen 187 LEQFLKDL 194 (212)
T ss_dssp HHHH----
T ss_pred HHHHhhhc
Confidence 66666553
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.71 E-value=1.2e-15 Score=138.54 Aligned_cols=172 Identities=19% Similarity=0.164 Sum_probs=122.8
Q ss_pred CccccccceeeeCC-CeEEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 016380 67 NEVIEDHSQVETGR-DAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFLTLVRRTCGIK 145 (390)
Q Consensus 67 ~~~~ED~~~v~~~~-~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~ 145 (390)
...-.|.+.+...+ +..+++|+||||+...|.+++..+...+.+..... . .+...+..+++.+...
T Consensus 14 ~~~~GD~~~~~~~~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~-~----~~~~~l~~~n~~l~~~-------- 80 (193)
T smart00331 14 TQVGGDFYDVVKLPEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEG-I----SLSQILERLNRAIYEN-------- 80 (193)
T ss_pred HhcCccEEEEEEeCCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcC-C----CHHHHHHHHHHHHHhc--------
Confidence 33446666555544 47899999999988888888999988888765432 1 2455566667666543
Q ss_pred CcccccCceEEEEEE--EcCeEEEEEeCCceEEEEEeCCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCeEEEeCCe
Q 016380 146 PVIAAIGSCCLVGVI--WKGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGV 223 (390)
Q Consensus 146 ~~~~~~GsT~~v~li--~~~~L~vAnvGDSRavl~r~~~~~~~~~~~LT~dH~~~~~~er~ri~~~~p~~~~~v~~~~g~ 223 (390)
.....|+|++++++ .+++++++|+||+|+++++.++ ...+.+.+
T Consensus 81 -~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~----~~~~~~~~----------------------------- 126 (193)
T smart00331 81 -GEDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADG----GLVEDLDD----------------------------- 126 (193)
T ss_pred -CCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCC----CeEEEcCC-----------------------------
Confidence 12347999999998 6789999999999999999431 22223322
Q ss_pred eeeCCcccccccccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEecCCCCeEEEEEcCCCcccCCHHHHHHH
Q 016380 224 WRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQEAVDI 303 (390)
Q Consensus 224 ~rv~G~l~vsRsiGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L~~~D~fLILaSDGLwd~ls~~eiv~i 303 (390)
.++.+|... ..++++..+.++++|. |+|+||||||.++.+++.++
T Consensus 127 --------~~~~lG~~~--------------------------~~~~~~~~~~l~~gd~-l~l~TDGl~e~~~~~~l~~~ 171 (193)
T smart00331 127 --------LGAPLGLEP--------------------------DVEVDVRELTLEPGDL-LLLYTDGLTEARNPERLEEL 171 (193)
T ss_pred --------CCceeeeCC--------------------------CCcceeEEEeeCCCCE-EEEECCCccccCChHHHHHH
Confidence 234455432 3346778889999997 66899999999999999999
Q ss_pred HHcCC---hhHHHHHHHHHH
Q 016380 304 VYNCP---RAGVARRLLKTA 320 (390)
Q Consensus 304 v~~~~---~~~~A~~Lv~~A 320 (390)
+.++. ++..++++.+.+
T Consensus 172 l~~~~~~~~~~~~~~i~~~~ 191 (193)
T smart00331 172 LEELLGSPPAEIAQRILEEL 191 (193)
T ss_pred HHHhcCCCHHHHHHHHHHHH
Confidence 98863 566666666554
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.46 E-value=4.6e-12 Score=137.38 Aligned_cols=190 Identities=20% Similarity=0.178 Sum_probs=130.3
Q ss_pred cCccccccceeee-CCCeEEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHHhcCC
Q 016380 66 ANEVIEDHSQVET-GRDAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFLTLVRRTCGI 144 (390)
Q Consensus 66 ~~~~~ED~~~v~~-~~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~ 144 (390)
+.....|.+.+.. +++...++|+||+|....|..++..+.+.+.+.... ... .+.++..+|..+... .
T Consensus 563 g~~vsGD~y~~~~l~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~-g~~----~~~ai~~lN~~L~~~------~ 631 (764)
T TIGR02865 563 GELVSGDSYSFGKLSAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLES-GFD----REVAIKTVNSILSLR------S 631 (764)
T ss_pred CCcccCceEEEEEECCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHc-CCC----HHHHHHHHHHHHHhC------C
Confidence 3556789886665 445678999999995555556666666666654432 222 244566666655322 1
Q ss_pred CCcccccCceEEEEEEE--cCeEEEEEeCCceEEEEEeCCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCeEEEeCC
Q 016380 145 KPVIAAIGSCCLVGVIW--KGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQG 222 (390)
Q Consensus 145 ~~~~~~~GsT~~v~li~--~~~L~vAnvGDSRavl~r~~~~~~~~~~~LT~dH~~~~~~er~ri~~~~p~~~~~v~~~~g 222 (390)
.....+|+.+++++ .+++.++|+|+++.|+.|++ ..++++..+.+
T Consensus 632 ---~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~-----~v~~i~s~~lP------------------------- 678 (764)
T TIGR02865 632 ---TDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGA-----KVEVIRSSNLP------------------------- 678 (764)
T ss_pred ---CCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECC-----EEEEecCCCce-------------------------
Confidence 12357999998885 68999999999999998876 55666432211
Q ss_pred eeeeCCcccccccccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEecCCCCeEEEEEcCCCcccCCHHH---
Q 016380 223 VWRIKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQE--- 299 (390)
Q Consensus 223 ~~rv~G~l~vsRsiGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L~~~D~fLILaSDGLwd~ls~~e--- 299 (390)
+|-.. ..+++....+++++|. |+++|||+||..++++
T Consensus 679 -------------lGil~--------------------------~~~~~~~~~~L~~GD~-Lll~SDGv~E~~~~~~~~~ 718 (764)
T TIGR02865 679 -------------IGILD--------------------------EVDVELVRKKLKNGDL-IVMVSDGVLEGEKEVEGKV 718 (764)
T ss_pred -------------eEecc--------------------------CCccceEEEEeCCCCE-EEEECCCCCcCCcccccHH
Confidence 22211 3356778889999996 7799999999987543
Q ss_pred --HHHHHHcC---ChhHHHHHHHHHHHHHHHHhccccchhhhhcccCCCCccCCceEEEEEEc
Q 016380 300 --AVDIVYNC---PRAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIFI 357 (390)
Q Consensus 300 --iv~iv~~~---~~~~~A~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~rr~~~DniTvIVv~l 357 (390)
+.+++.+. +++..+++|+++|+..... ..+||+|++|+++
T Consensus 719 ~~l~~~l~~~~~~~p~ela~~Il~~a~~~~~~------------------~~~DD~Tvlvirv 763 (764)
T TIGR02865 719 LWLVRKLKETNTNDPEEIAEYLLEKAKELRSG------------------KIKDDMTVIVAKV 763 (764)
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCC------------------CCCCCeEEEEEEe
Confidence 67777653 5788899999998765321 1389999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.37 E-value=7.3e-11 Score=106.72 Aligned_cols=179 Identities=21% Similarity=0.237 Sum_probs=110.7
Q ss_pred CeEEEEEEcCCChhHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCceEEEEEE
Q 016380 81 DAFFVGVYDGHGGPEASRFIRDHLFRHLMRFAREGGTISEDILRSAFSATEDGFLTLVRRTCGIKPVIAAIGSCCLVGVI 160 (390)
Q Consensus 81 ~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~GsT~~v~li 160 (390)
+.+++.|+|+.|..-.|.+.+..+...+....... .. ....+..+++.+..... . ....+|++++.+
T Consensus 3 ~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~-~~----p~~~l~~ln~~l~~~~~----~----~~~~~t~~~~~~ 69 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAALLSAALASAIRELLDEG-LD----PEELLEALNRRLYRDLK----G----DNRYATACYAII 69 (193)
T ss_dssp TEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTT-TS----HHHHHHHHHHHHHHHTT----T----TSTTEEEEEEEE
T ss_pred CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcC-CC----HHHHHHHHHHHHHHHhh----h----ccccceEEEEEe
Confidence 46799999999955555555666666666654322 22 44455666666644311 1 125778887776
Q ss_pred E--cCeEEEEEeCCceEEEEEeCCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCeEEEeCCeeeeCCcccccccccc
Q 016380 161 W--KGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWRIKGLIQVSRSIGD 238 (390)
Q Consensus 161 ~--~~~L~vAnvGDSRavl~r~~~~~~~~~~~LT~dH~~~~~~er~ri~~~~p~~~~~v~~~~g~~rv~G~l~vsRsiGd 238 (390)
. .++++++|+|++++++++.++. ....+..... .+|-
T Consensus 70 d~~~~~l~~~~aG~~~~l~~~~~~~---~~~~~~~~~~--------------------------------------~lG~ 108 (193)
T PF07228_consen 70 DPETGTLTYANAGHPPPLLLRPGGR---EIEQLESEGP--------------------------------------PLGI 108 (193)
T ss_dssp ETTTTEEEEEEESSSEEEEEETTCT---EEEEETCSSB--------------------------------------BCSS
T ss_pred cccceEEEEeCCCCCCEEEEecccc---ceeecccCcc--------------------------------------ceee
Confidence 5 5689999999999999998521 2222221110 1333
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEecCCCCeEEEEEcCCCcccCCHH-------HHHHHHHcC---C
Q 016380 239 AYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWEHLTNQ-------EAVDIVYNC---P 308 (390)
Q Consensus 239 ~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L~~~D~fLILaSDGLwd~ls~~-------eiv~iv~~~---~ 308 (390)
.. ..++....+.+.++|. |+|+||||+|....+ .+.+++.+. +
T Consensus 109 ~~--------------------------~~~~~~~~~~l~~gd~-l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~~~~~ 161 (193)
T PF07228_consen 109 FE--------------------------DIDYQEQEIQLEPGDR-LLLYTDGLFEALNEDGEFFGEERLLELLDENRGLS 161 (193)
T ss_dssp SC--------------------------TTCEEEEEEE--TTEE-EEEECHHHCTTTCHHCHHCCCHHHHHHHHCHTTS-
T ss_pred ec--------------------------cccccceEEEeccccE-EEEeCCChhhccCCccchhHHHHHHHHHhhccCCC
Confidence 21 2345567889999997 779999999998544 345666643 3
Q ss_pred hhHHHHHHHHHHHHHHHHhccccchhhhhcccCCCCccCCceEEEEEEcC
Q 016380 309 RAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIFID 358 (390)
Q Consensus 309 ~~~~A~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~rr~~~DniTvIVv~l~ 358 (390)
.+..++.|++.+...+. ....||+|||++++.
T Consensus 162 ~~~~~~~l~~~~~~~~~------------------~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 162 PQEIIDALLEAIDRFGK------------------GPLRDDITVLVIRRQ 193 (193)
T ss_dssp HHHHHHHHHHHHHHHTT------------------SSTSS-EEEEEEEE-
T ss_pred HHHHHHHHHHHHHHhcC------------------CCCCCceEEEEEEEC
Confidence 56666666666655211 124899999999863
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.29 E-value=0.00012 Score=73.48 Aligned_cols=189 Identities=21% Similarity=0.217 Sum_probs=114.8
Q ss_pred cccceeee-CCCeEEEEEEcCCC-hhHHHHHHHHHHHHHHHHHHhhC-CCchHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 016380 71 EDHSQVET-GRDAFFVGVYDGHG-GPEASRFIRDHLFRHLMRFAREG-GTISEDILRSAFSATEDGFLTLVRRTCGIKPV 147 (390)
Q Consensus 71 ED~~~v~~-~~~~~~~gV~DGhG-G~~as~~a~~~l~~~l~~~~~~~-~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~ 147 (390)
-|.+.+-. +....+++|.|..| |-.|+-. .......+.. .... .-.+.+.|+ ..+.-+... ..
T Consensus 163 GD~yd~~~~~~~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~-~~~~~~~~p~~~l~----~~n~~~~~~-------~~- 228 (367)
T COG2208 163 GDYYDFIQLGEKRLRIGIGDVSGKGVPAALL-MLMPKLALRL-LLESGPLDPADVLE----TLNRVLKQN-------LE- 228 (367)
T ss_pred CceEEEEEECCcEEEEEEEeccCCCHHHHHH-HHHHHHHHHH-hhhcccCCHHHHHH----HHHHHHHhc-------cc-
Confidence 45543333 33578999999988 6666655 3333333333 3333 234444433 233322221 11
Q ss_pred ccccCceEEEEEEE--cCeEEEEEeCCceEEEEEeCCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCeEEEeCCeee
Q 016380 148 IAAIGSCCLVGVIW--KGTLYVANVGDSRAVIGSLGKSGKIVAEQLTMDHNACMEEVRQELRSLHPDDSHIVVMKQGVWR 225 (390)
Q Consensus 148 ~~~~GsT~~v~li~--~~~L~vAnvGDSRavl~r~~~~~~~~~~~LT~dH~~~~~~er~ri~~~~p~~~~~v~~~~g~~r 225 (390)
..+=+|...++++ .+++..+|+|=--+++.+.++.. ....+.
T Consensus 229 -~~~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~--~~~~l~--------------------------------- 272 (367)
T COG2208 229 -EDMFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEI--EVEDLT--------------------------------- 272 (367)
T ss_pred -CCcEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCc--eeEEcc---------------------------------
Confidence 1156777777775 56999999998888888875210 011111
Q ss_pred eCCcccccccccccccccCCCCCCCCCCCCCCCCCCCCCccccCCceEEEecCCCCeEEEEEcCCCcc-------cCCHH
Q 016380 226 IKGLIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICTRALQPNDKFLIFASDGLWE-------HLTNQ 298 (390)
Q Consensus 226 v~G~l~vsRsiGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~L~~~D~fLILaSDGLwd-------~ls~~ 298 (390)
.....+|-.. ...+.+....++++|. |+|.|||+.| .+..+
T Consensus 273 -----~~g~piG~~~--------------------------~~~~~~~~~~l~~gd~-lvl~tDGv~Ea~~~~~~~~~~~ 320 (367)
T COG2208 273 -----ALGLPIGLLP--------------------------DYQYEVASLQLEPGDL-LVLYTDGVTEARNSDGEFFGLE 320 (367)
T ss_pred -----CCCceeeecC--------------------------CccchheeEEecCCCE-EEEEcCCeeeeecCCccEecHH
Confidence 1344556553 5566778899999885 8899999999 56677
Q ss_pred HHHHHHHcC---ChhHHHHHHHHHHHHHHHHhccccchhhhhcccCCCCccCCceEEEEEEcC
Q 016380 299 EAVDIVYNC---PRAGVARRLLKTALNAAAKKRQMGYDELKKIDKGDRRFYHDDITVVVIFID 358 (390)
Q Consensus 299 eiv~iv~~~---~~~~~A~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~rr~~~DniTvIVv~l~ 358 (390)
...+++..+ ++++.++.+.+...+.... -..+||+|+|++++.
T Consensus 321 ~~~~~~~~~~~~~~~e~~~~i~~~l~~~~~~-----------------~~~~DDiTll~lk~~ 366 (367)
T COG2208 321 RLLKILGRLLGQPAEEILEAILESLEELQGD-----------------QIQDDDITLLVLKVK 366 (367)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHhhCC-----------------ccccCceEEEEEEec
Confidence 777777742 4666666666666554331 123788999999875
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=55.97 E-value=1.7e+02 Score=28.32 Aligned_cols=97 Identities=12% Similarity=0.025 Sum_probs=48.5
Q ss_pred ccccceeee-CCCeEEEEEEc--CCChhH-HHHHHHHHHHH-HHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHHhcCC
Q 016380 70 IEDHSQVET-GRDAFFVGVYD--GHGGPE-ASRFIRDHLFR-HLMRFAREGGTISEDILRSAFSATEDGFLTLVRRTCGI 144 (390)
Q Consensus 70 ~ED~~~v~~-~~~~~~~gV~D--GhGG~~-as~~a~~~l~~-~l~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~ 144 (390)
.-|.+.+.. +++...|-++| ||||+. .+......++. .+......+... .......+..+|..|... .
T Consensus 150 ~GD~~d~~~l~~~~~~~~~~DvsGhg~hg~~aa~l~~~~~~~~~~~~~~~~~~~-~~~p~~~l~~lN~~l~~~------~ 222 (303)
T PRK10693 150 PGLVLDIAALSDNDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQNQR-LPELGALLKQVNHLLRQA------N 222 (303)
T ss_pred CccEEeeeecCCCcEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHhcccccc-cCCHHHHHHHHHHHHHhc------C
Confidence 345544333 33344445555 787554 22333334333 444322111110 001234455666665543 1
Q ss_pred CCcccccCceEEEEEEE--cCeEEEEEeCCceEEE
Q 016380 145 KPVIAAIGSCCLVGVIW--KGTLYVANVGDSRAVI 177 (390)
Q Consensus 145 ~~~~~~~GsT~~v~li~--~~~L~vAnvGDSRavl 177 (390)
.. .--|++.++++ .++|.++|.|-...++
T Consensus 223 ~~----~~~t~~~~~~d~~~~~l~~~~AGhp~~~~ 253 (303)
T PRK10693 223 LP----GQFPLLVGYYHRELKNLILVSAGLNATLN 253 (303)
T ss_pred CC----ceeeEEEEEEEcCCCeEEEEeCCCCCEEe
Confidence 11 11477777776 4589999999999885
No 21
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=37.21 E-value=21 Score=27.24 Aligned_cols=19 Identities=26% Similarity=0.620 Sum_probs=14.0
Q ss_pred CCCeEEEEEcCCCcccCCHH
Q 016380 279 PNDKFLIFASDGLWEHLTNQ 298 (390)
Q Consensus 279 ~~D~fLILaSDGLwd~ls~~ 298 (390)
+|.+|| +|+||+|=.+...
T Consensus 26 ~G~Rll-va~nGv~lEv~r~ 44 (72)
T PF09436_consen 26 PGHRLL-VASNGVFLEVRRP 44 (72)
T ss_pred CCcEEE-EecCcEEEEEech
Confidence 677755 7999999765544
No 22
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=26.51 E-value=1.3e+02 Score=17.99 Aligned_cols=21 Identities=38% Similarity=0.642 Sum_probs=16.6
Q ss_pred EEEEEcCeEEEEEeCCceEEE
Q 016380 157 VGVIWKGTLYVANVGDSRAVI 177 (390)
Q Consensus 157 v~li~~~~L~vAnvGDSRavl 177 (390)
+++-.++.+||+-.|..|+..
T Consensus 7 vav~~~g~i~VaD~~n~rV~v 27 (28)
T PF01436_consen 7 VAVDSDGNIYVADSGNHRVQV 27 (28)
T ss_dssp EEEETTSEEEEEECCCTEEEE
T ss_pred EEEeCCCCEEEEECCCCEEEE
Confidence 344488999999999988765
No 23
>PRK06369 nac nascent polypeptide-associated complex protein; Reviewed
Probab=25.02 E-value=2.3e+02 Score=23.71 Aligned_cols=44 Identities=9% Similarity=0.156 Sum_probs=33.9
Q ss_pred CccccCCceEEEecCCCCeEEEEEcCCCcc-------cCCHHHHHHHHHcC
Q 016380 264 PVLTAEPSICTRALQPNDKFLIFASDGLWE-------HLTNQEAVDIVYNC 307 (390)
Q Consensus 264 p~v~~~Pdi~~~~L~~~D~fLILaSDGLwd-------~ls~~eiv~iv~~~ 307 (390)
-+|...|+++..+....+.|.|++..-.-+ .+++++|.-+..+.
T Consensus 37 ~~Vi~~P~V~~m~~~g~~tY~I~Ge~~~e~~~~~~~~~i~~edI~lv~~q~ 87 (115)
T PRK06369 37 EIVFENPQVTVMDAQGQKTYQIVGEPEEVEKEAEKEVEIPEEDIELVAEQT 87 (115)
T ss_pred EEEEcCCeEEEEecCCCcEEEEEeccEEeeccccccCCCCHHHHHHHHHHH
Confidence 357899999999998889899999887754 36666666665554
No 24
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=24.86 E-value=61 Score=26.19 Aligned_cols=37 Identities=19% Similarity=0.415 Sum_probs=29.9
Q ss_pred ceEEEecCCCCeEEEEEcCCCcccCCHHHHHHHHHcCC
Q 016380 271 SICTRALQPNDKFLIFASDGLWEHLTNQEAVDIVYNCP 308 (390)
Q Consensus 271 di~~~~L~~~D~fLILaSDGLwd~ls~~eiv~iv~~~~ 308 (390)
+....-++++|. ++|..||++-.+...+..+-++..|
T Consensus 16 ~~~l~~l~~~D~-vlL~qdGV~aAl~~~~~~~sl~~~p 52 (96)
T COG2168 16 DLLLRLLTEGDA-VLLLQDGVYAALKGNRYLASLRESP 52 (96)
T ss_pred HHHHHHhcccCe-EEEEcccchhhhcCcHHHHHHhcCc
Confidence 334556788898 6699999999999988888888776
No 25
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=24.78 E-value=93 Score=28.32 Aligned_cols=43 Identities=33% Similarity=0.497 Sum_probs=34.6
Q ss_pred CCeEEEEEcCCCc-----------ccCCHHHHHHHHHcC-----ChhHHHHHHHHHHHHH
Q 016380 280 NDKFLIFASDGLW-----------EHLTNQEAVDIVYNC-----PRAGVARRLLKTALNA 323 (390)
Q Consensus 280 ~D~fLILaSDGLw-----------d~ls~~eiv~iv~~~-----~~~~~A~~Lv~~Al~~ 323 (390)
+|. ++|.|.|+| |+|.++...+.|.+. -+.++|++|++.-..+
T Consensus 71 DDT-vLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~R 129 (237)
T COG3700 71 DDT-VLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRR 129 (237)
T ss_pred CCe-eEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhc
Confidence 365 668999888 789999999999875 2788999999887654
Done!