Query 016381
Match_columns 390
No_of_seqs 195 out of 1606
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 06:20:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016381.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016381hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd07420 MPP_RdgC Drosophila me 100.0 4.1E-38 8.9E-43 302.2 19.8 262 39-369 29-312 (321)
2 cd07416 MPP_PP2B PP2B, metallo 100.0 5.3E-37 1.1E-41 294.5 20.2 257 38-380 24-300 (305)
3 smart00156 PP2Ac Protein phosp 100.0 8.8E-37 1.9E-41 288.9 19.7 243 41-369 12-259 (271)
4 PTZ00480 serine/threonine-prot 100.0 6.5E-37 1.4E-41 293.4 17.9 259 38-382 40-306 (320)
5 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 3.1E-36 6.7E-41 286.3 19.9 247 38-369 23-273 (285)
6 cd07417 MPP_PP5_C PP5, C-termi 100.0 2E-36 4.3E-41 291.1 18.7 259 38-379 37-306 (316)
7 PTZ00244 serine/threonine-prot 100.0 3E-36 6.5E-41 287.2 18.9 247 38-370 33-284 (294)
8 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 1.4E-36 3.1E-41 289.8 16.2 247 38-370 31-282 (293)
9 cd07425 MPP_Shelphs Shewanella 100.0 3.3E-36 7.2E-41 275.0 17.9 207 61-362 1-207 (208)
10 cd07419 MPP_Bsu1_C Arabidopsis 100.0 7.1E-36 1.5E-40 287.9 20.7 267 37-375 28-310 (311)
11 KOG0372 Serine/threonine speci 100.0 2.8E-37 6.1E-42 275.6 9.4 258 40-382 26-290 (303)
12 PTZ00239 serine/threonine prot 100.0 1.6E-35 3.5E-40 283.0 20.6 256 38-378 24-287 (303)
13 cd07418 MPP_PP7 PP7, metalloph 100.0 8.7E-35 1.9E-39 283.2 20.9 265 37-369 42-353 (377)
14 KOG0374 Serine/threonine speci 100.0 3.8E-35 8.1E-40 282.2 13.2 257 36-377 38-303 (331)
15 PRK13625 bis(5'-nucleosyl)-tet 100.0 5.5E-33 1.2E-37 260.2 21.9 231 58-378 1-234 (245)
16 TIGR00668 apaH bis(5'-nucleosy 100.0 3.9E-34 8.4E-39 268.1 12.0 243 58-378 1-270 (279)
17 PHA02239 putative protein phos 100.0 1.5E-32 3.2E-37 254.7 18.7 213 58-355 1-222 (235)
18 PRK00166 apaH diadenosine tetr 100.0 1.9E-32 4.1E-37 259.2 17.8 243 58-378 1-270 (275)
19 cd07421 MPP_Rhilphs Rhilph pho 100.0 4.8E-32 1E-36 254.0 19.1 253 58-377 2-300 (304)
20 cd07413 MPP_PA3087 Pseudomonas 100.0 3E-32 6.4E-37 251.5 15.3 209 61-369 2-219 (222)
21 cd07422 MPP_ApaH Escherichia c 100.0 1.5E-32 3.2E-37 257.3 10.4 230 60-367 1-257 (257)
22 cd07423 MPP_PrpE Bacillus subt 100.0 7E-31 1.5E-35 244.5 18.9 227 58-378 1-231 (234)
23 PRK11439 pphA serine/threonine 100.0 8.2E-31 1.8E-35 241.5 16.1 199 56-366 15-217 (218)
24 KOG0375 Serine-threonine phosp 100.0 3E-32 6.4E-37 254.7 5.8 252 44-381 75-346 (517)
25 KOG0373 Serine/threonine speci 100.0 1.5E-31 3.2E-36 235.4 9.5 261 43-389 32-304 (306)
26 cd00144 MPP_PPP_family phospho 100.0 1.6E-29 3.4E-34 233.6 16.7 220 61-365 1-224 (225)
27 KOG0371 Serine/threonine prote 100.0 3.3E-29 7E-34 225.5 5.8 257 36-377 39-302 (319)
28 PRK09968 serine/threonine-spec 100.0 1.7E-27 3.6E-32 219.3 15.9 198 58-366 15-217 (218)
29 KOG0377 Protein serine/threoni 99.9 1.2E-28 2.5E-33 235.7 7.0 248 54-370 161-422 (631)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.9 5.6E-26 1.2E-30 207.8 14.9 202 58-366 1-206 (207)
31 KOG0376 Serine-threonine phosp 99.8 4.3E-20 9.4E-25 181.0 8.2 228 57-368 213-445 (476)
32 PRK09453 phosphodiesterase; Pr 99.5 3.7E-13 8E-18 120.5 15.9 68 58-142 1-76 (182)
33 TIGR00040 yfcE phosphoesterase 99.4 2.2E-12 4.8E-17 112.7 13.3 64 58-142 1-64 (158)
34 cd00841 MPP_YfcE Escherichia c 99.3 7E-11 1.5E-15 102.7 14.5 59 59-142 1-59 (155)
35 PRK05340 UDP-2,3-diacylglucosa 99.2 9.3E-11 2E-15 109.7 12.3 70 58-142 1-83 (241)
36 PF12850 Metallophos_2: Calcin 99.2 4.7E-10 1E-14 96.9 13.4 60 58-142 1-60 (156)
37 cd07394 MPP_Vps29 Homo sapiens 99.0 5.6E-09 1.2E-13 93.2 14.8 59 59-142 1-65 (178)
38 cd07379 MPP_239FB Homo sapiens 99.0 2.6E-09 5.6E-14 90.8 11.1 61 59-142 1-63 (135)
39 cd07388 MPP_Tt1561 Thermus the 99.0 5.5E-08 1.2E-12 89.7 19.3 72 57-142 4-75 (224)
40 cd07397 MPP_DevT Myxococcus xa 98.9 1.3E-08 2.8E-13 94.3 12.9 62 59-143 2-64 (238)
41 cd07392 MPP_PAE1087 Pyrobaculu 98.9 8E-08 1.7E-12 85.6 16.6 64 60-142 1-65 (188)
42 TIGR01854 lipid_A_lpxH UDP-2,3 98.8 4.4E-08 9.5E-13 91.1 10.0 71 60-142 1-81 (231)
43 COG0622 Predicted phosphoester 98.7 4.6E-07 1E-11 80.1 15.2 59 317-378 104-165 (172)
44 PF00149 Metallophos: Calcineu 98.7 2.8E-08 6.1E-13 85.1 7.3 74 58-144 1-80 (200)
45 COG2129 Predicted phosphoester 98.7 2.3E-06 5E-11 77.6 19.4 211 57-374 3-222 (226)
46 COG2908 Uncharacterized protei 98.6 1.2E-06 2.7E-11 80.0 14.4 60 310-376 175-234 (237)
47 cd07395 MPP_CSTP1 Homo sapiens 98.5 5.4E-06 1.2E-10 78.3 17.8 75 59-142 6-99 (262)
48 cd07402 MPP_GpdQ Enterobacter 98.5 1.9E-06 4.2E-11 80.0 13.5 69 59-142 1-83 (240)
49 PF06874 FBPase_2: Firmicute f 98.5 8.8E-06 1.9E-10 83.5 17.8 74 306-379 503-586 (640)
50 cd07403 MPP_TTHA0053 Thermus t 98.5 2.9E-06 6.2E-11 71.6 12.1 56 61-140 1-56 (129)
51 cd07398 MPP_YbbF-LpxH Escheric 98.5 6.8E-07 1.5E-11 81.8 8.8 40 310-352 177-216 (217)
52 cd07383 MPP_Dcr2 Saccharomyces 98.4 8.3E-06 1.8E-10 73.9 14.0 70 58-140 3-87 (199)
53 PRK11148 cyclic 3',5'-adenosin 98.4 9.8E-06 2.1E-10 77.3 14.5 74 56-142 13-98 (275)
54 cd07400 MPP_YydB Bacillus subt 98.3 1.4E-05 3E-10 68.2 13.5 43 95-141 36-80 (144)
55 cd07399 MPP_YvnB Bacillus subt 98.2 0.00011 2.4E-09 67.4 18.0 70 59-142 2-82 (214)
56 PRK11340 phosphodiesterase Yae 98.2 4E-06 8.7E-11 79.8 8.0 72 56-142 48-125 (271)
57 cd07385 MPP_YkuE_C Bacillus su 98.1 3.1E-06 6.7E-11 77.7 5.6 71 57-142 1-76 (223)
58 PRK04036 DNA polymerase II sma 98.1 9.3E-05 2E-09 76.5 15.7 81 56-143 242-344 (504)
59 TIGR00619 sbcd exonuclease Sbc 98.0 2.1E-05 4.5E-10 74.2 8.6 75 58-142 1-88 (253)
60 cd07401 MPP_TMEM62_N Homo sapi 98.0 0.00022 4.8E-09 67.3 15.3 23 314-336 190-212 (256)
61 PHA02546 47 endonuclease subun 98.0 1.8E-05 3.9E-10 77.9 8.1 75 58-142 1-89 (340)
62 TIGR03729 acc_ester putative p 98.0 1.6E-05 3.5E-10 74.2 7.3 68 59-142 1-74 (239)
63 cd00838 MPP_superfamily metall 98.0 1.8E-05 3.8E-10 65.1 6.6 69 61-140 1-69 (131)
64 cd07404 MPP_MS158 Microscilla 98.0 7.5E-06 1.6E-10 71.8 4.2 68 60-142 1-68 (166)
65 cd07396 MPP_Nbla03831 Homo sap 97.9 5.1E-05 1.1E-09 72.1 8.6 72 59-143 2-87 (267)
66 PRK10966 exonuclease subunit S 97.9 6.3E-05 1.4E-09 75.7 9.3 75 58-142 1-87 (407)
67 cd00839 MPP_PAPs purple acid p 97.9 0.00024 5.1E-09 68.1 12.9 69 58-143 5-82 (294)
68 cd07390 MPP_AQ1575 Aquifex aeo 97.8 3.5E-05 7.6E-10 68.0 5.7 68 60-143 1-83 (168)
69 cd00840 MPP_Mre11_N Mre11 nucl 97.8 6.5E-05 1.4E-09 68.6 7.7 75 59-143 1-90 (223)
70 PF14582 Metallophos_3: Metall 97.7 0.0007 1.5E-08 61.7 12.4 58 310-372 194-251 (255)
71 cd07391 MPP_PF1019 Pyrococcus 97.6 0.00013 2.9E-09 64.5 6.3 47 95-143 42-89 (172)
72 COG4186 Predicted phosphoester 97.5 0.00039 8.5E-09 59.4 7.3 42 94-142 45-86 (186)
73 cd08165 MPP_MPPE1 human MPPE1 97.5 0.00026 5.7E-09 61.7 6.5 48 95-142 39-89 (156)
74 cd07393 MPP_DR1119 Deinococcus 97.5 0.00031 6.8E-09 65.3 7.3 69 60-141 1-83 (232)
75 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.5 0.00021 4.5E-09 67.6 6.1 75 60-142 1-86 (262)
76 TIGR00583 mre11 DNA repair pro 97.4 0.00077 1.7E-08 67.6 9.1 77 56-142 2-123 (405)
77 TIGR00024 SbcD_rel_arch putati 97.4 0.00037 7.9E-09 64.5 6.2 41 95-142 59-102 (225)
78 COG3855 Fbp Uncharacterized pr 97.4 0.0042 9.1E-08 61.7 13.6 42 95-144 191-232 (648)
79 PLN02533 probable purple acid 97.2 0.0076 1.6E-07 61.2 14.7 73 57-142 139-211 (427)
80 COG1409 Icc Predicted phosphoh 97.2 0.00091 2E-08 63.5 7.7 74 58-144 1-80 (301)
81 COG1408 Predicted phosphohydro 97.2 0.00052 1.1E-08 65.7 5.5 74 54-142 41-118 (284)
82 COG0420 SbcD DNA repair exonuc 97.2 0.0012 2.6E-08 66.1 8.2 75 58-142 1-88 (390)
83 cd08163 MPP_Cdc1 Saccharomyces 97.1 0.019 4.2E-07 54.2 15.2 24 310-333 204-227 (257)
84 KOG1432 Predicted DNA repair e 97.1 0.039 8.4E-07 53.3 16.8 48 95-143 101-148 (379)
85 cd08166 MPP_Cdc1_like_1 unchar 97.1 0.00083 1.8E-08 60.5 5.2 48 95-142 43-93 (195)
86 cd07386 MPP_DNA_pol_II_small_a 97.0 0.00092 2E-08 62.5 5.1 72 61-142 2-94 (243)
87 cd00845 MPP_UshA_N_like Escher 96.9 0.0021 4.5E-08 60.3 6.5 67 59-142 2-82 (252)
88 cd07384 MPP_Cdc1_like Saccharo 96.8 0.0031 6.6E-08 55.8 6.7 48 95-142 46-100 (171)
89 cd07380 MPP_CWF19_N Schizosacc 96.6 0.0047 1E-07 53.5 5.9 68 61-140 1-68 (150)
90 COG1407 Predicted ICC-like pho 96.4 0.0055 1.2E-07 56.5 5.4 76 54-142 16-110 (235)
91 cd08164 MPP_Ted1 Saccharomyces 96.2 0.013 2.8E-07 52.7 6.6 69 65-142 24-111 (193)
92 KOG3325 Membrane coat complex 96.1 0.064 1.4E-06 45.7 9.9 64 58-142 1-66 (183)
93 cd07410 MPP_CpdB_N Escherichia 96.0 0.011 2.3E-07 56.5 5.6 65 59-141 2-94 (277)
94 cd07408 MPP_SA0022_N Staphyloc 95.2 0.047 1E-06 51.4 6.4 65 59-141 2-81 (257)
95 cd07412 MPP_YhcR_N Bacillus su 95.0 0.059 1.3E-06 51.7 6.7 67 59-142 2-88 (288)
96 cd07378 MPP_ACP5 Homo sapiens 94.7 0.082 1.8E-06 50.1 6.7 43 311-354 190-232 (277)
97 cd07411 MPP_SoxB_N Thermus the 94.6 0.074 1.6E-06 50.3 6.0 34 321-354 206-239 (264)
98 KOG3662 Cell division control 94.4 0.065 1.4E-06 53.4 5.3 53 90-142 89-144 (410)
99 TIGR00282 metallophosphoestera 94.2 0.12 2.6E-06 49.0 6.6 68 58-142 1-71 (266)
100 KOG1378 Purple acid phosphatas 93.8 0.73 1.6E-05 46.6 11.4 26 312-337 322-347 (452)
101 cd07406 MPP_CG11883_N Drosophi 93.8 0.14 3.1E-06 48.2 6.3 66 59-141 2-82 (257)
102 cd07409 MPP_CD73_N CD73 ecto-5 93.3 0.22 4.8E-06 47.6 6.7 67 59-142 2-94 (281)
103 PRK09419 bifunctional 2',3'-cy 92.4 0.22 4.8E-06 57.0 6.1 67 58-141 661-735 (1163)
104 COG1768 Predicted phosphohydro 91.9 0.079 1.7E-06 46.7 1.5 77 58-142 1-86 (230)
105 cd00842 MPP_ASMase acid sphing 91.1 0.46 1E-05 45.5 6.0 72 62-143 42-123 (296)
106 KOG2679 Purple (tartrate-resis 91.0 1.3 2.7E-05 41.9 8.3 78 54-142 40-126 (336)
107 cd07382 MPP_DR1281 Deinococcus 89.8 0.91 2E-05 42.8 6.5 67 59-142 1-70 (255)
108 PRK09420 cpdB bifunctional 2', 88.8 0.85 1.8E-05 48.9 6.2 69 57-142 25-122 (649)
109 cd08162 MPP_PhoA_N Synechococc 88.1 1 2.2E-05 43.9 5.8 70 59-141 2-90 (313)
110 cd07405 MPP_UshA_N Escherichia 87.8 0.87 1.9E-05 43.6 5.1 71 59-142 2-87 (285)
111 TIGR01390 CycNucDiestase 2',3' 86.8 1.2 2.6E-05 47.6 5.9 67 59-142 4-99 (626)
112 KOG2476 Uncharacterized conser 86.8 1.8 3.9E-05 43.6 6.6 70 58-139 6-75 (528)
113 cd07407 MPP_YHR202W_N Saccharo 86.7 1.3 2.7E-05 42.5 5.5 71 58-142 6-97 (282)
114 COG1311 HYS2 Archaeal DNA poly 85.4 2.7 5.8E-05 42.8 7.1 78 59-142 227-321 (481)
115 cd07387 MPP_PolD2_C PolD2 (DNA 85.3 3.3 7.3E-05 39.1 7.4 48 95-143 43-108 (257)
116 PRK09419 bifunctional 2',3'-cy 84.9 1.4 3E-05 50.6 5.6 68 58-142 42-139 (1163)
117 COG0737 UshA 5'-nucleotidase/2 84.8 1.5 3.3E-05 45.6 5.4 68 58-142 27-115 (517)
118 PRK11907 bifunctional 2',3'-cy 84.6 3 6.5E-05 45.8 7.7 68 58-142 116-213 (814)
119 KOG3947 Phosphoesterases [Gene 84.0 0.96 2.1E-05 42.6 3.1 68 55-142 59-126 (305)
120 TIGR01530 nadN NAD pyrophospha 82.4 3.1 6.8E-05 43.7 6.6 39 95-141 50-93 (550)
121 PF04042 DNA_pol_E_B: DNA poly 81.8 3.4 7.4E-05 37.3 5.8 75 60-143 1-92 (209)
122 PRK09558 ushA bifunctional UDP 81.1 2.5 5.4E-05 44.5 5.3 71 59-142 36-121 (551)
123 PTZ00422 glideosome-associated 80.0 2.4 5.3E-05 42.4 4.5 79 58-142 27-109 (394)
124 KOG2863 RNA lariat debranching 77.8 5.4 0.00012 39.1 5.9 79 58-143 1-89 (456)
125 PRK09418 bifunctional 2',3'-cy 77.2 4.5 9.8E-05 44.3 5.9 67 58-141 40-141 (780)
126 KOG2310 DNA repair exonuclease 67.3 22 0.00047 36.9 7.6 58 57-124 13-82 (646)
127 COG0639 ApaH Diadenosine tetra 61.8 6.9 0.00015 32.1 2.6 27 223-249 29-57 (155)
128 KOG0376 Serine-threonine phosp 56.7 2.6 5.6E-05 42.8 -1.0 91 45-149 30-123 (476)
129 PTZ00235 DNA polymerase epsilo 52.2 53 0.0011 31.6 7.0 82 58-142 28-122 (291)
130 PF06874 FBPase_2: Firmicute f 51.3 13 0.00029 39.2 3.0 42 95-144 185-226 (640)
131 PF13258 DUF4049: Domain of un 43.2 26 0.00057 32.5 3.3 48 95-142 85-140 (318)
132 COG1692 Calcineurin-like phosp 40.9 91 0.002 29.3 6.4 68 58-142 1-71 (266)
133 PF00149 Metallophos: Calcineu 39.8 34 0.00074 27.9 3.5 24 310-333 176-199 (200)
134 KOG3770 Acid sphingomyelinase 37.7 1E+02 0.0022 32.5 6.9 67 70-145 194-266 (577)
135 cd07378 MPP_ACP5 Homo sapiens 36.3 1.9E+02 0.0041 26.9 8.3 70 59-142 2-83 (277)
136 TIGR03729 acc_ester putative p 35.7 59 0.0013 29.9 4.6 26 310-335 197-222 (239)
137 PRK10413 hydrogenase 2 accesso 31.0 27 0.00058 26.9 1.2 14 234-247 43-56 (82)
138 PF01455 HupF_HypC: HupF/HypC 30.3 23 0.0005 26.2 0.7 13 234-246 38-50 (68)
139 PRK10409 hydrogenase assembly 30.0 26 0.00056 27.5 1.0 14 234-247 42-55 (90)
140 cd07404 MPP_MS158 Microscilla 26.4 53 0.0012 28.1 2.5 25 312-336 127-151 (166)
141 COG3855 Fbp Uncharacterized pr 25.8 31 0.00068 35.1 0.9 48 309-356 513-567 (648)
142 cd00838 MPP_superfamily metall 25.5 1.2E+02 0.0026 23.6 4.4 26 311-336 92-117 (131)
143 COG3792 Uncharacterized protei 23.6 9.1 0.0002 31.6 -2.7 29 63-108 26-60 (122)
144 TIGR00074 hypC_hupF hydrogenas 23.3 47 0.001 25.1 1.3 13 234-246 36-48 (76)
145 TIGR03767 P_acnes_RR metalloph 23.0 2.8E+02 0.0061 28.8 7.2 66 310-377 367-443 (496)
146 PF06490 FleQ: Flagellar regul 21.2 1.2E+02 0.0025 24.4 3.4 74 59-142 1-81 (109)
147 KOG3818 DNA polymerase epsilon 20.5 5.1E+02 0.011 26.6 8.1 79 56-142 281-369 (525)
148 PF12641 Flavodoxin_3: Flavodo 20.2 1.4E+02 0.0031 25.9 3.9 60 62-122 3-66 (160)
No 1
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=4.1e-38 Score=302.20 Aligned_cols=262 Identities=17% Similarity=0.205 Sum_probs=182.9
Q ss_pred cCCCeEecCCCCccccCCC---CeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHH
Q 016381 39 ASKPIVVSGNTPTFVSAPG---RRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAIL 115 (390)
Q Consensus 39 ~~~~~~~~~~~p~~~~~~~---~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl 115 (390)
-.+...++.+||+++.... .+++|||||||++++|.++|++.|++. ..+++||||||||||++|+||+
T Consensus 29 ~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~---------~~~~~lFLGDyVDRG~~s~Evl 99 (321)
T cd07420 29 LREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPS---------PENPYVFNGDFVDRGKRSIEIL 99 (321)
T ss_pred HHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCC---------ccceEEEeccccCCCCCcHHHH
Confidence 3455577888999877653 589999999999999999999988753 2468999999999999999999
Q ss_pred HHHHHhHHHHhhcCCcEEEEcCCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhccc
Q 016381 116 SLLRSLDMQAKAEGGAVFQVNGNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSR 195 (390)
Q Consensus 116 ~~l~~l~~~~~~~g~~v~~lrGNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~ 195 (390)
.+|+.++..+|. +|++||||||.+.++..++|. +||.. +|-...
T Consensus 100 ~ll~~lk~~~p~---~v~llRGNHE~~~~~~~yGf~-----~e~~~--~y~~~~-------------------------- 143 (321)
T cd07420 100 IILFAFFLVYPN---EVHLNRGNHEDHIMNLRYGFT-----KEVMS--KYKLHG-------------------------- 143 (321)
T ss_pred HHHHHHhhcCCC---cEEEecCchhhhhhhhhcChH-----HHHHH--HhCccH--------------------------
Confidence 999999998764 899999999999887666542 22211 110000
Q ss_pred ccCCCchhhhhhhhhhhhhhhcCCCCchhhHhhcCCcEEEeCC-EEEEecCCCCCccccChhhccHHHHHH----HhcCc
Q 016381 196 NYWGPLNLVKRQKGVIARSVLFRPGGPMACELARHGVVLKVND-WVFCHGGLLPHHVAYGLERMNNEVSLW----MKGLS 270 (390)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~-~lfvHgGi~p~~~~~~l~~~~~~~~~~----i~~~~ 270 (390)
..++ ..+.++|+.||+++++++ +++|||||+|. .++++++...+.- .+...
T Consensus 144 ------------------~~l~---~~~~~~F~~LPlaaii~~~i~cvHGGi~~~---~~l~~i~~i~r~~~~~~~~~p~ 199 (321)
T cd07420 144 ------------------KKIL---RLLEDVFSWLPLATIIDNKILVVHGGISDS---TDLDLLDKIDRHKYVSVLRPPL 199 (321)
T ss_pred ------------------HHHH---HHHHHHHHhCCceEEEcCCEEEEeCCCCCc---cCHHHHHhhhccccccccCCCc
Confidence 0000 125788999999999976 66689999873 3455444322210 00000
Q ss_pred CC--------CCCCCCCcccc--cCCCCcccccccccCC---ccchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCc
Q 016381 271 EC--------GNNPKIPFIAT--RGYDSVVWNRLYSRDI---SDLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGA 337 (390)
Q Consensus 271 ~~--------~~~~~~~~~~~--~~~~~~lW~r~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~ 337 (390)
.. +..+..+.... .-..+.+|+||..... ...++.++.||++++.+||++++.+.|||||+++.+|+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~ 279 (321)
T cd07420 200 RKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGY 279 (321)
T ss_pred cccccccccccccccccccccccchhheeeecCCccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcce
Confidence 00 00000000000 0023689999864322 11234467899999999999999999999999999999
Q ss_pred eeeeCCeEEEEEecCCC-CccCCCceEEEEeCC
Q 016381 338 NCEYNCSIWRIDVGMSS-GVLNSRPEVLEITDN 369 (390)
Q Consensus 338 ~~~~~~~~i~IDtG~~~-g~~~g~~~~L~i~~~ 369 (390)
....+++++||.+++.+ +..++.+++|.++++
T Consensus 280 ~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~ 312 (321)
T cd07420 280 EFCHNNKVITIFSASNYYEEGSNRGAYIKLGPD 312 (321)
T ss_pred EEecCCeEEEEecCCccCCCCCccEEEEEECCC
Confidence 88889999999997665 224577899999875
No 2
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=5.3e-37 Score=294.52 Aligned_cols=257 Identities=18% Similarity=0.276 Sum_probs=187.7
Q ss_pred ccCCCeEecCCCCccccCCCCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHH
Q 016381 38 TASKPIVVSGNTPTFVSAPGRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSL 117 (390)
Q Consensus 38 ~~~~~~~~~~~~p~~~~~~~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~ 117 (390)
.-.+.+.++.+||+++...+ +++|||||||++.+|.++|+..+... .++++|||||||||++|+||+.+
T Consensus 24 l~~~~~~il~~e~~l~~i~~-~i~ViGDIHG~~~dL~~l~~~~g~~~----------~~~ylFLGDyVDRG~~s~Evi~l 92 (305)
T cd07416 24 IITEGAEILRQEPNLLRIEA-PVTVCGDIHGQFYDLLKLFEVGGSPA----------NTRYLFLGDYVDRGYFSIECVLY 92 (305)
T ss_pred HHHHHHHHHHhCCCeEccCC-CEEEEEeCCCCHHHHHHHHHhcCCCC----------CceEEEECCccCCCCChHHHHHH
Confidence 44566678899999998877 89999999999999999999877642 46899999999999999999999
Q ss_pred HHHhHHHHhhcCCcEEEEcCCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhccccc
Q 016381 118 LRSLDMQAKAEGGAVFQVNGNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNY 197 (390)
Q Consensus 118 l~~l~~~~~~~g~~v~~lrGNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~ 197 (390)
++.++..+|. +|++||||||.+.++..++|. +++. .+ |+
T Consensus 93 L~~lki~~p~---~v~lLRGNHE~~~l~~~~gf~-----~e~~--~~--------------------------y~----- 131 (305)
T cd07416 93 LWALKILYPK---TLFLLRGNHECRHLTEYFTFK-----QECK--IK--------------------------YS----- 131 (305)
T ss_pred HHHHHhhcCC---CEEEEeCCCcHHHHHHhhCch-----hHHH--Hh--------------------------cc-----
Confidence 9999999875 999999999998765544431 1110 00 00
Q ss_pred CCCchhhhhhhhhhhhhhhcCCCCchhhHhhcCCcEEEeCC-EEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCC
Q 016381 198 WGPLNLVKRQKGVIARSVLFRPGGPMACELARHGVVLKVND-WVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNP 276 (390)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~-~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~ 276 (390)
..++ ..+.++|..+|+++++++ +++||||++|.. ..+++++. ..++...+
T Consensus 132 ----------------~~l~---~~~~~~f~~LPlaaii~~~i~~vHGGi~p~~--~~l~~i~~--------i~r~~~~~ 182 (305)
T cd07416 132 ----------------ERVY---DACMEAFDCLPLAALMNQQFLCVHGGLSPEL--KTLDDIRK--------LDRFREPP 182 (305)
T ss_pred ----------------HHHH---HHHHHHHhhccceeEEcCCEEEEcCCCCccc--ccHHHhcc--------cCCCCCCC
Confidence 0000 125788999999988764 777899999863 23444433 22221112
Q ss_pred CCCcccccCCCCcccccccccCC----------ccchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCC---
Q 016381 277 KIPFIATRGYDSVVWNRLYSRDI----------SDLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNC--- 343 (390)
Q Consensus 277 ~~~~~~~~~~~~~lW~r~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~--- 343 (390)
..+. ..+.+|+||..... ...++.++.||++++.+||++++.+.|||||+++.+|++...++
T Consensus 183 ~~~~-----~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~ 257 (305)
T cd07416 183 AFGP-----MCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRAHEAQDAGYRMYRKSQTT 257 (305)
T ss_pred CCCc-----ceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEeccccccceEEecCCCcC
Confidence 2222 24699999864321 11234467899999999999999999999999999999876554
Q ss_pred ---eEEEEEecCCC-CccCCCceEEEEeCCe--EEEEecCCCC
Q 016381 344 ---SIWRIDVGMSS-GVLNSRPEVLEITDNK--ARVISGKRDT 380 (390)
Q Consensus 344 ---~~i~IDtG~~~-g~~~g~~~~L~i~~~~--~~~~~~~~~~ 380 (390)
+++||.++..+ |..++.++++.++++. +.++.+.+..
T Consensus 258 ~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~~~ 300 (305)
T cd07416 258 GFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHP 300 (305)
T ss_pred CCCcEEEEeCCccccCCCCceEEEEEEcCCcceEEEecCCCCC
Confidence 89999996665 2345678999998874 5555555443
No 3
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=8.8e-37 Score=288.93 Aligned_cols=243 Identities=17% Similarity=0.294 Sum_probs=180.9
Q ss_pred CCeEecCCCCccccCCCCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHH
Q 016381 41 KPIVVSGNTPTFVSAPGRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRS 120 (390)
Q Consensus 41 ~~~~~~~~~p~~~~~~~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~ 120 (390)
+...++.+||+++...+ +++|||||||++.+|.++|+..+... .+++||||||||||++|+|++.+++.
T Consensus 12 ~~~~il~~e~~~~~i~~-~i~vvGDiHG~~~~l~~ll~~~~~~~----------~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 12 EVKEIFRQEPNLVEVSA-PVTVCGDIHGQFDDLLRLFDLNGPPP----------DTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred HHHHHHHhCCCeEEeCC-CEEEEEeCcCCHHHHHHHHHHcCCCC----------CceEEEeCCccCCCCChHHHHHHHHH
Confidence 44567889999988876 89999999999999999999887642 57899999999999999999999999
Q ss_pred hHHHHhhcCCcEEEEcCCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhcccccCCC
Q 016381 121 LDMQAKAEGGAVFQVNGNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNYWGP 200 (390)
Q Consensus 121 l~~~~~~~g~~v~~lrGNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 200 (390)
++..+|. ++++||||||.+.++..++|.. |+. . .|+
T Consensus 81 lk~~~p~---~v~llrGNHE~~~~~~~~gf~~-----e~~-------~---------------------~~~-------- 116 (271)
T smart00156 81 LKILYPN---RVVLLRGNHESRSMNEIYGFYD-----ECK-------R---------------------KYG-------- 116 (271)
T ss_pred HHhcCCC---CEEEEeccccHHHHHHhccchh-----hhh-------h---------------------hcC--------
Confidence 9998764 9999999999987654444311 110 0 000
Q ss_pred chhhhhhhhhhhhhhhcCCCCchhhHhhcCCcEEEeCC-EEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCCCCC
Q 016381 201 LNLVKRQKGVIARSVLFRPGGPMACELARHGVVLKVND-WVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNPKIP 279 (390)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~-~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~ 279 (390)
..++ ..+.++|+.||+++++++ +++||||++|. -..+++++. ..++...+..+
T Consensus 117 -------------~~l~---~~~~~~f~~LPl~aii~~~~~~vHgGi~~~--~~~l~~i~~--------i~r~~~~~~~~ 170 (271)
T smart00156 117 -------------EEIY---EKFQEAFSWLPLAALIDNKILCMHGGLSPD--LTTLDDIRK--------LKRPQEPPDEG 170 (271)
T ss_pred -------------HHHH---HHHHHHHhhChhheEEcCeEEEEecCCCCc--cCCHHHHhc--------ccCCCCCCchh
Confidence 0000 125788999999999985 77789999985 234554443 22221122222
Q ss_pred cccccCCCCccccccccc-C--CccchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecCCCCc
Q 016381 280 FIATRGYDSVVWNRLYSR-D--ISDLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMSSGV 356 (390)
Q Consensus 280 ~~~~~~~~~~lW~r~~~~-~--~~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~~g~ 356 (390)
. ..+++|+||... . ....++.++.|+.+++.+||++++.++|||||+++++|++...++++++|.++..+..
T Consensus 171 ~-----~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~y~~ 245 (271)
T smart00156 171 L-----LIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSAPNYCG 245 (271)
T ss_pred h-----hhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECCccccc
Confidence 2 246899998422 1 1122345678899999999999999999999999999999888999999999766632
Q ss_pred -cCCCceEEEEeCC
Q 016381 357 -LNSRPEVLEITDN 369 (390)
Q Consensus 357 -~~g~~~~L~i~~~ 369 (390)
.++.++++.++++
T Consensus 246 ~~~n~~a~~~i~~~ 259 (271)
T smart00156 246 RFGNKAAVLKVDKD 259 (271)
T ss_pred CCCceEEEEEECCC
Confidence 4577899999876
No 4
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=6.5e-37 Score=293.44 Aligned_cols=259 Identities=17% Similarity=0.245 Sum_probs=190.4
Q ss_pred ccCCCeEecCCCCccccCCCCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHH
Q 016381 38 TASKPIVVSGNTPTFVSAPGRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSL 117 (390)
Q Consensus 38 ~~~~~~~~~~~~p~~~~~~~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~ 117 (390)
+-.+...+++.||+++...+ +++|||||||++.+|.++++..++.. .+.+||||||||||++|+|++.+
T Consensus 40 l~~~~~~il~~ep~ll~i~~-~i~vvGDIHG~~~dL~~l~~~~g~~~----------~~~ylfLGDyVDRG~~s~evl~l 108 (320)
T PTZ00480 40 LCIKARDIFISQPILLELEA-PLKICGDVHGQYFDLLRLFEYGGYPP----------ESNYLFLGDYVDRGKQSLETICL 108 (320)
T ss_pred HHHHHHHHHHhCCceEecCC-CeEEEeecccCHHHHHHHHHhcCCCC----------cceEEEeceecCCCCCcHHHHHH
Confidence 44556678889999998877 89999999999999999999988753 45899999999999999999999
Q ss_pred HHHhHHHHhhcCCcEEEEcCCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhccccc
Q 016381 118 LRSLDMQAKAEGGAVFQVNGNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNY 197 (390)
Q Consensus 118 l~~l~~~~~~~g~~v~~lrGNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~ 197 (390)
++.++..+|. +|++||||||.+.++..++|. +|+ .. .|+.
T Consensus 109 l~~lki~~p~---~v~llRGNHE~~~~~~~ygF~-----~e~-------~~---------------------~y~~---- 148 (320)
T PTZ00480 109 LLAYKIKYPE---NFFLLRGNHECASINRIYGFY-----DEC-------KR---------------------RYTI---- 148 (320)
T ss_pred HHHhcccCCC---ceEEEecccchhhhhhhcchH-----HHH-------Hh---------------------hcCH----
Confidence 9999988764 999999999998776655531 111 00 0000
Q ss_pred CCCchhhhhhhhhhhhhhhcCCCCchhhHhhcCCcEEEeCC-EEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCC
Q 016381 198 WGPLNLVKRQKGVIARSVLFRPGGPMACELARHGVVLKVND-WVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNP 276 (390)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~-~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~ 276 (390)
.+| ..+.+.|..||+++++++ +++||||++|.. ..+++++. ..++...+
T Consensus 149 -----------------~l~---~~~~~~F~~LPlaAiI~~~i~cvHGGI~p~~--~~l~~i~~--------i~rp~~~~ 198 (320)
T PTZ00480 149 -----------------KLW---KTFTDCFNCLPVAALIDEKILCMHGGLSPEL--SNLEQIRR--------IMRPTDVP 198 (320)
T ss_pred -----------------HHH---HHHHHHHHhccHhheecCcEEEEcCCcCccc--CCHHHHhc--------ccCCCCCC
Confidence 000 115677899999988876 555799999852 23444432 22222222
Q ss_pred CCCcccccCCCCcccccccccC---CccchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecCC
Q 016381 277 KIPFIATRGYDSVVWNRLYSRD---ISDLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMS 353 (390)
Q Consensus 277 ~~~~~~~~~~~~~lW~r~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~ 353 (390)
..+. ..+.+|+||.... ....++.++.||.+++.+||++++.+.|||||+++.+|++...+++++||.++..
T Consensus 199 ~~~~-----~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR~Hq~v~~G~~~~~~~~~iTvFSa~~ 273 (320)
T PTZ00480 199 DTGL-----LCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICRAHQVVEDGYEFFSKRQLVTLFSAPN 273 (320)
T ss_pred ccch-----hhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEEcCccccCceEEeCCCcEEEEeCCcc
Confidence 2222 2469999996421 1222344688999999999999999999999999999998888899999998766
Q ss_pred CC-ccCCCceEEEEeCC---eEEEEecCCCCCc
Q 016381 354 SG-VLNSRPEVLEITDN---KARVISGKRDTFT 382 (390)
Q Consensus 354 ~g-~~~g~~~~L~i~~~---~~~~~~~~~~~~~ 382 (390)
+. ..++.+++|.|+++ .+.++.+...++-
T Consensus 274 Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~~ 306 (320)
T PTZ00480 274 YCGEFDNAGSMMTIDESLMCSFQILKPAEQGQG 306 (320)
T ss_pred cCCCCCccEEEEEECCCCcEeEEEecCCccccc
Confidence 52 23567888999887 3566766555443
No 5
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=3.1e-36 Score=286.33 Aligned_cols=247 Identities=14% Similarity=0.203 Sum_probs=182.5
Q ss_pred ccCCCeEecCCCCccccCCCCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHH
Q 016381 38 TASKPIVVSGNTPTFVSAPGRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSL 117 (390)
Q Consensus 38 ~~~~~~~~~~~~p~~~~~~~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~ 117 (390)
.-.+...++++||+++..++ +++|||||||++.+|.++|+..++.. .+++||||||||||+.|+|++.+
T Consensus 23 l~~~~~~il~~e~~~~~i~~-~i~vvGDIHG~~~dL~~ll~~~~~~~----------~~~~lfLGDyVDRG~~s~evl~l 91 (285)
T cd07415 23 LCEKAKEILVKESNVQRVRS-PVTVCGDIHGQFYDLLELFRVGGDPP----------DTNYLFLGDYVDRGYYSVETFLL 91 (285)
T ss_pred HHHHHHHHHHhCCCEEecCC-CEEEEEeCCCCHHHHHHHHHHcCCCC----------CCeEEEEeEECCCCcCHHHHHHH
Confidence 34455677889999988877 89999999999999999999887643 46899999999999999999999
Q ss_pred HHHhHHHHhhcCCcEEEEcCCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhccccc
Q 016381 118 LRSLDMQAKAEGGAVFQVNGNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNY 197 (390)
Q Consensus 118 l~~l~~~~~~~g~~v~~lrGNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~ 197 (390)
++.++..+| .+|++||||||.+.++..++|. +|+ ...|+.
T Consensus 92 l~~lk~~~p---~~v~llrGNHE~~~~~~~ygf~-----~e~----------------------------~~~y~~---- 131 (285)
T cd07415 92 LLALKVRYP---DRITLLRGNHESRQITQVYGFY-----DEC----------------------------LRKYGN---- 131 (285)
T ss_pred HHHHhhcCC---CcEEEEecccchHhhhhhcchh-----HHH----------------------------HHhcCc----
Confidence 999998876 4999999999998776655431 111 111110
Q ss_pred CCCchhhhhhhhhhhhhhhcCCCCchhhHhhcCCcEEEeCC-EEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCC
Q 016381 198 WGPLNLVKRQKGVIARSVLFRPGGPMACELARHGVVLKVND-WVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNP 276 (390)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~-~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~ 276 (390)
..++ ..+.++|..+|+++++++ +++||||++|.. ..+++++. ..++...+
T Consensus 132 ----------------~~l~---~~~~~~f~~lPlaaii~~~i~cvHgGi~p~~--~~~~~i~~--------i~r~~~~~ 182 (285)
T cd07415 132 ----------------ANVW---KYCTDLFDYLPLAALIDNQIFCVHGGLSPSI--DTLDQIRA--------IDRFQEVP 182 (285)
T ss_pred ----------------hHHH---HHHHHHHHHhHHHhEeCCeEEEEcCCCCCCc--ccHHHhhc--------ccCCCCCC
Confidence 0000 125678999999988876 566799999852 23333332 22222222
Q ss_pred CCCcccccCCCCcccccccccCC--ccchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecCCC
Q 016381 277 KIPFIATRGYDSVVWNRLYSRDI--SDLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMSS 354 (390)
Q Consensus 277 ~~~~~~~~~~~~~lW~r~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~~ 354 (390)
..+. ..+.+|+||..... ...++.++.||++++++||++++.+.|||||+++.+|+....+++++||.++..+
T Consensus 183 ~~~~-----~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~y 257 (285)
T cd07415 183 HEGP-----MCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQWMFDDKLVTVWSAPNY 257 (285)
T ss_pred CCCC-----ccceEecCCCccCCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCccccceEEEecCCcEEEEecCCcc
Confidence 2222 23689999864432 1223446889999999999999999999999999999998889999999986665
Q ss_pred C-ccCCCceEEEEeCC
Q 016381 355 G-VLNSRPEVLEITDN 369 (390)
Q Consensus 355 g-~~~g~~~~L~i~~~ 369 (390)
. ..++.+++|.++++
T Consensus 258 ~~~~~n~~a~l~i~~~ 273 (285)
T cd07415 258 CYRCGNVASIMELDEH 273 (285)
T ss_pred cCCCCceEEEEEECCC
Confidence 2 34578899999865
No 6
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=2e-36 Score=291.12 Aligned_cols=259 Identities=16% Similarity=0.210 Sum_probs=185.2
Q ss_pred ccCCCeEecCCCCccccCC---CCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHH
Q 016381 38 TASKPIVVSGNTPTFVSAP---GRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAI 114 (390)
Q Consensus 38 ~~~~~~~~~~~~p~~~~~~---~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~ev 114 (390)
+-.+...++.+||+++... ..+++||||||||+.+|.++|+..|+.. .++++||||||||||+.|+||
T Consensus 37 l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~---------~~~~ylFLGDyVDRG~~S~Ev 107 (316)
T cd07417 37 ILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPS---------ETNPYLFNGDFVDRGSFSVEV 107 (316)
T ss_pred HHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCC---------ccCeEEEEeeEecCCCChHHH
Confidence 3345567788899886653 2479999999999999999999988753 246899999999999999999
Q ss_pred HHHHHHhHHHHhhcCCcEEEEcCCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhcc
Q 016381 115 LSLLRSLDMQAKAEGGAVFQVNGNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLS 194 (390)
Q Consensus 115 l~~l~~l~~~~~~~g~~v~~lrGNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~ 194 (390)
+.+++.++..+|. +|++||||||.+.++..++|.. ++. ..|+.
T Consensus 108 l~ll~~lki~~p~---~v~lLRGNHE~~~~~~~~gf~~-----e~~----------------------------~k~~~- 150 (316)
T cd07417 108 ILTLFAFKLLYPN---HFHLNRGNHETDNMNKMYGFEG-----EVK----------------------------AKYNE- 150 (316)
T ss_pred HHHHHHhhhccCC---ceEEEeeccchHHHHHHhhhcc-----hhh----------------------------hcccH-
Confidence 9999999988764 8999999999987765544321 110 00000
Q ss_pred cccCCCchhhhhhhhhhhhhhhcCCCCchhhHhhcCCcEEEeCC-EEEEecCCCCCccccChhhccHHHHHHHhcCcCCC
Q 016381 195 RNYWGPLNLVKRQKGVIARSVLFRPGGPMACELARHGVVLKVND-WVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECG 273 (390)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~-~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~ 273 (390)
.++ ..+.++|..||+++++++ +++||||+++.. ..++++++.. .++.
T Consensus 151 --------------------~l~---~~~~~~f~~LPlaaii~~~~~~vHgGi~~~~-~~~l~~i~~i--------~r~~ 198 (316)
T cd07417 151 --------------------QMF---DLFSEVFNWLPLAHLINGKVLVVHGGLFSDD-GVTLDDIRKI--------DRFR 198 (316)
T ss_pred --------------------HHH---HHHHHHHHhchHhheeCCeEEEEccccccCC-CccHHHhhcc--------cCCC
Confidence 000 114678999999988875 677899995420 2345544432 1111
Q ss_pred CCCCCCcccccCCCCcccccccccCC--ccchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEec
Q 016381 274 NNPKIPFIATRGYDSVVWNRLYSRDI--SDLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVG 351 (390)
Q Consensus 274 ~~~~~~~~~~~~~~~~lW~r~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG 351 (390)
..+..+. ..+++|+||..... ...++.++.||.+++.+||++++++.|||||+++.+|+....+++++||.++
T Consensus 199 ~~~~~~~-----~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa 273 (316)
T cd07417 199 QPPDSGL-----MCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIRSHEVKDEGYEVEHDGKCITVFSA 273 (316)
T ss_pred CCCcccc-----ceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcCCcEEEECCcccceeEEEecCCeEEEEeCC
Confidence 1112222 24699999864321 2223346789999999999999999999999999999988889999999986
Q ss_pred CCC-CccCCCceEEEEeC-C---eEEEEecCCC
Q 016381 352 MSS-GVLNSRPEVLEITD-N---KARVISGKRD 379 (390)
Q Consensus 352 ~~~-g~~~g~~~~L~i~~-~---~~~~~~~~~~ 379 (390)
..+ +..++.++++.|++ + .+.++.+.+.
T Consensus 274 ~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~ 306 (316)
T cd07417 274 PNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPH 306 (316)
T ss_pred ccccCCCCcceEEEEEeCCCceeeeEeccCCCC
Confidence 665 22467889999987 3 2555655543
No 7
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=3e-36 Score=287.17 Aligned_cols=247 Identities=17% Similarity=0.251 Sum_probs=182.2
Q ss_pred ccCCCeEecCCCCccccCCCCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHH
Q 016381 38 TASKPIVVSGNTPTFVSAPGRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSL 117 (390)
Q Consensus 38 ~~~~~~~~~~~~p~~~~~~~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~ 117 (390)
+-.+...++.+||+++...+ +++|||||||++++|.++|+++++.. .+.++|||||||||+.|.|++.+
T Consensus 33 l~~~~~~il~~e~~ll~i~~-p~~ViGDIHG~~~~L~~l~~~~~~~~----------~~~~lfLGDyVDRG~~s~evl~l 101 (294)
T PTZ00244 33 VLTEVREIFMSQPMLLEIRP-PVRVCGDTHGQYYDLLRIFEKCGFPP----------YSNYLFLGDYVDRGKHSVETITL 101 (294)
T ss_pred HHHHHHHHHHhCCCeEeccC-CceeeccCCCCHHHHHHHHHHcCCCC----------cccEEEeeeEecCCCCHHHHHHH
Confidence 33445566889999988877 89999999999999999999988753 35799999999999999999999
Q ss_pred HHHhHHHHhhcCCcEEEEcCCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhccccc
Q 016381 118 LRSLDMQAKAEGGAVFQVNGNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNY 197 (390)
Q Consensus 118 l~~l~~~~~~~g~~v~~lrGNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~ 197 (390)
++.++..+|. +++++|||||.+.++..++|. +++. ..|+.
T Consensus 102 l~~lk~~~p~---~v~llrGNHE~~~~~~~~gf~-----~e~~----------------------------~~y~~---- 141 (294)
T PTZ00244 102 QFCYKIVYPE---NFFLLRGNHECASINKMYGFF-----DDVK----------------------------RRYNI---- 141 (294)
T ss_pred HHHHhhccCC---eEEEEecccchHhHhhccChH-----HHHH----------------------------HHhhH----
Confidence 9999988764 999999999998776555431 1111 01100
Q ss_pred CCCchhhhhhhhhhhhhhhcCCCCchhhHhhcCCcEEEeC-CEEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCC
Q 016381 198 WGPLNLVKRQKGVIARSVLFRPGGPMACELARHGVVLKVN-DWVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNP 276 (390)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~-~~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~ 276 (390)
.++ ..+.++|..+|+++.++ ++++||||++|.+. .+++++. ..++...+
T Consensus 142 -----------------~l~---~~~~~~f~~lPlaaii~~~il~vHgGi~p~~~--~l~~i~~--------i~rp~~~~ 191 (294)
T PTZ00244 142 -----------------KLF---KAFTDVFNTMPVCCVISEKIICMHGGLSPDLT--SLASVNE--------IERPCDVP 191 (294)
T ss_pred -----------------HHH---HHHHHHHHhCchheEecCeeEEEcCCCCchhh--HHHHhhh--------hccccCCC
Confidence 000 12578999999999886 46778999998532 2333332 22221112
Q ss_pred CCCcccccCCCCcccccccccC---CccchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecCC
Q 016381 277 KIPFIATRGYDSVVWNRLYSRD---ISDLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMS 353 (390)
Q Consensus 277 ~~~~~~~~~~~~~lW~r~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~ 353 (390)
..+. ..+.+|+||.... ....++.++.||++++++||++++.+.|||||+++.+|++...+++++||.++..
T Consensus 192 ~~~~-----~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~Hq~~~~G~~~~~~~~~iTvfSa~~ 266 (294)
T PTZ00244 192 DRGI-----LCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRAHQVMERGYGFFASRQLVTVFSAPN 266 (294)
T ss_pred ccch-----hheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEcCccccCceEEcCCCeEEEEeCCcc
Confidence 2222 2469999986421 1222344688999999999999999999999999999998878999999999666
Q ss_pred C-CccCCCceEEEEeCCe
Q 016381 354 S-GVLNSRPEVLEITDNK 370 (390)
Q Consensus 354 ~-g~~~g~~~~L~i~~~~ 370 (390)
+ |..++.+++|.|+++.
T Consensus 267 Y~~~~~N~~a~l~i~~~~ 284 (294)
T PTZ00244 267 YCGEFDNDAAVMNIDDKL 284 (294)
T ss_pred ccCCCCceEEEEEECCCC
Confidence 5 2345678999998763
No 8
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=1.4e-36 Score=289.75 Aligned_cols=247 Identities=17% Similarity=0.242 Sum_probs=183.2
Q ss_pred ccCCCeEecCCCCccccCCCCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHH
Q 016381 38 TASKPIVVSGNTPTFVSAPGRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSL 117 (390)
Q Consensus 38 ~~~~~~~~~~~~p~~~~~~~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~ 117 (390)
.-.+...+++.||+++..++ +++|||||||++++|.++|+..++.. .+++||||||||||++|+|++.+
T Consensus 31 l~~~~~~il~~ep~~l~i~~-~i~viGDIHG~~~~L~~l~~~~~~~~----------~~~~lfLGDyVDRG~~s~e~i~l 99 (293)
T cd07414 31 LCLKSREIFLSQPILLELEA-PLKICGDIHGQYYDLLRLFEYGGFPP----------ESNYLFLGDYVDRGKQSLETICL 99 (293)
T ss_pred HHHHHHHHHHhCCCeEecCC-ceEEEEecCCCHHHHHHHHHhcCCCC----------cceEEEEeeEecCCCCcHHHHHH
Confidence 44556678889999988877 89999999999999999999988753 45899999999999999999999
Q ss_pred HHHhHHHHhhcCCcEEEEcCCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhccccc
Q 016381 118 LRSLDMQAKAEGGAVFQVNGNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNY 197 (390)
Q Consensus 118 l~~l~~~~~~~g~~v~~lrGNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~ 197 (390)
++.++..+|. ++++||||||.+.++..++|.. |+.. . |+
T Consensus 100 l~~lk~~~p~---~i~llrGNHE~~~~~~~~gf~~-----e~~~--~--------------------------y~----- 138 (293)
T cd07414 100 LLAYKIKYPE---NFFLLRGNHECASINRIYGFYD-----ECKR--R--------------------------YN----- 138 (293)
T ss_pred HHHhhhhCCC---cEEEEecccchhhHhhhcchhh-----HHHH--h--------------------------hh-----
Confidence 9999998875 8999999999988765555321 1110 0 00
Q ss_pred CCCchhhhhhhhhhhhhhhcCCCCchhhHhhcCCcEEEeCC-EEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCC
Q 016381 198 WGPLNLVKRQKGVIARSVLFRPGGPMACELARHGVVLKVND-WVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNP 276 (390)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~-~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~ 276 (390)
..++ ..+.++|..+|+++++++ +++||||++|.. ..+++++. ..++...+
T Consensus 139 ----------------~~l~---~~~~~~f~~lPlaa~i~~~i~cvHgGi~p~~--~~l~~i~~--------i~r~~~~~ 189 (293)
T cd07414 139 ----------------IKLW---KTFTDCFNCLPVAAIIDEKIFCMHGGLSPDL--QSMEQIRR--------IMRPTDVP 189 (293)
T ss_pred ----------------HHHH---HHHHHHHHHhHHHHhhCCcEEEEccCCCccc--CcHHHHhc--------ccCCCCCC
Confidence 0000 115678999999988876 556799999852 34444443 22221122
Q ss_pred CCCcccccCCCCcccccccccC-C--ccchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecCC
Q 016381 277 KIPFIATRGYDSVVWNRLYSRD-I--SDLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMS 353 (390)
Q Consensus 277 ~~~~~~~~~~~~~lW~r~~~~~-~--~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~ 353 (390)
..+. ..+.+|+||.... . ...++.++.||.+++++||++++++.|||||+++.+|+....+++++||.++..
T Consensus 190 ~~~~-----~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~iTvfSa~~ 264 (293)
T cd07414 190 DQGL-----LCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 264 (293)
T ss_pred chhh-----HhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECCccccCeEEEeCCCcEEEEecCCc
Confidence 2222 2368999986431 1 122344678999999999999999999999999999998878899999998666
Q ss_pred CC-ccCCCceEEEEeCCe
Q 016381 354 SG-VLNSRPEVLEITDNK 370 (390)
Q Consensus 354 ~g-~~~g~~~~L~i~~~~ 370 (390)
+. ..++.+++|.|+++.
T Consensus 265 Y~~~~~N~~a~l~i~~~~ 282 (293)
T cd07414 265 YCGEFDNAGAMMSVDETL 282 (293)
T ss_pred ccCCCCceEEEEEECCCC
Confidence 52 245778999998873
No 9
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=100.00 E-value=3.3e-36 Score=275.04 Aligned_cols=207 Identities=50% Similarity=0.758 Sum_probs=159.4
Q ss_pred EEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcCCch
Q 016381 61 VAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNGNHE 140 (390)
Q Consensus 61 ~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrGNHE 140 (390)
+||||||||+++|+++|+.+++. +.+.+|..+.+++|++||+|||||++.+|+++++++..++++.|+++++|+||||
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~--~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE 78 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVI--DSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHE 78 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCC--CccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCc
Confidence 58999999999999999999987 4456788899999999999999999999999999999999988999999999999
Q ss_pred hhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhcccccCCCchhhhhhhhhhhhhhhcCCC
Q 016381 141 TMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNYWGPLNLVKRQKGVIARSVLFRPG 220 (390)
Q Consensus 141 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (390)
.+++.+.+++..+....+. ..+ ...+..++.+.
T Consensus 79 ~~~l~~~~~~~~~~~~~~~------------------~~~-----------------------------~~~~~~~~~~~ 111 (208)
T cd07425 79 LMNLCGDFRYVHPKYFNEF------------------GGL-----------------------------AMRRRELFSPG 111 (208)
T ss_pred HHHHcchhccCChhHHHHH------------------Hhh-----------------------------hhhHHHhcCCc
Confidence 9988766555443211100 000 00012233455
Q ss_pred CchhhHhhcCCcEEEeCCEEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCCCCCcccccCCCCcccccccccCCc
Q 016381 221 GPMACELARHGVVLKVNDWVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNPKIPFIATRGYDSVVWNRLYSRDIS 300 (390)
Q Consensus 221 ~~~~~~l~~lP~~~~i~~~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lW~r~~~~~~~ 300 (390)
.++.+||+++|+++.+++++|||||+.| +|+|.+.....
T Consensus 112 ~~~~~~L~~lP~~~~~~~~~fvHag~~~-----------------------------------------~w~r~y~~~~~ 150 (208)
T cd07425 112 GELGRWLRSKPVIVKVNDTLFVHGGLGP-----------------------------------------LWYRGYSKETS 150 (208)
T ss_pred cHHHHHHHhCCeEEEECCEEEEeCCcHH-----------------------------------------HHhhHhhhhhh
Confidence 6688999999999999999999999843 44444332211
Q ss_pred cchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecCCCCccCCCce
Q 016381 301 DLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMSSGVLNSRPE 362 (390)
Q Consensus 301 ~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~~g~~~g~~~ 362 (390)
... .+...+.++++.++.++||+||||++.+....|++++++||||+|.++++|.+.
T Consensus 151 ~~~-----~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~~~~~~~~~~~ 207 (208)
T cd07425 151 DKE-----CAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGMSKGVYGGPLE 207 (208)
T ss_pred hcc-----chHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCcchhhcCCCCC
Confidence 000 011357788889999999999999988665689999999999999988877654
No 10
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=7.1e-36 Score=287.89 Aligned_cols=267 Identities=14% Similarity=0.182 Sum_probs=187.4
Q ss_pred hccCCCeEecCCCCccccCCCCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHH
Q 016381 37 ATASKPIVVSGNTPTFVSAPGRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILS 116 (390)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~~~~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~ 116 (390)
.+-.+...++++||+++...+ +++||||||||+++|.++|+.+++...+ ..|+.....+|||||||||||+|+||+.
T Consensus 28 ~l~~~~~~il~~e~~~~~i~~-~~~viGDIHG~~~~L~~ll~~~g~~~~~--~~~~~~~~~~vfLGDyVDRGp~s~evl~ 104 (311)
T cd07419 28 ELCDAAEDIFKQEPMVLRLRA-PIKIFGDIHGQFGDLMRLFDEYGSPVTE--AAGDIEYIDYLFLGDYVDRGSNSLETIC 104 (311)
T ss_pred HHHHHHHHHHHhCCCeEeeCC-CEEEEEeccCCHHHHHHHHHHcCCCccc--ccCCCcCceEEEECCccCCCCChHHHHH
Confidence 344566678899999988877 8999999999999999999999876421 2233334589999999999999999999
Q ss_pred HHHHhHHHHhhcCCcEEEEcCCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhcccc
Q 016381 117 LLRSLDMQAKAEGGAVFQVNGNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRN 196 (390)
Q Consensus 117 ~l~~l~~~~~~~g~~v~~lrGNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~ 196 (390)
+++.++..+| ++|++||||||.+.++..++|.. ++.. .+.. +...+ .
T Consensus 105 ll~~lk~~~p---~~v~lLRGNHE~~~l~~~~gf~~-----e~~~---~~~~-----------~~~~~-~---------- 151 (311)
T cd07419 105 LLLALKVKYP---NQIHLIRGNHEDRDINALFGFRE-----ECKE---RLGE-----------DPNDG-D---------- 151 (311)
T ss_pred HHHHhhhcCC---CcEEEeccccchHHHHHHhcccH-----HHHH---hcCc-----------cchhh-H----------
Confidence 9999998876 49999999999988765554321 1100 0000 00000 0
Q ss_pred cCCCchhhhhhhhhhhhhhhcCCCCchhhHhhcCCcEEEeC-CEEEEecCCCCCccccChhhccHHHHHHHhcCcCCC-C
Q 016381 197 YWGPLNLVKRQKGVIARSVLFRPGGPMACELARHGVVLKVN-DWVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECG-N 274 (390)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~-~~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~-~ 274 (390)
.++ ..+.++|+.+|++++++ ++++||||++|.. ..+++++. ..++. .
T Consensus 152 ------------------~l~---~~~~~~f~~LPl~avi~~~~l~vHgGi~p~~--~~l~~i~~--------i~r~~~~ 200 (311)
T cd07419 152 ------------------SVW---RRINRLFEWLPLAAIIEDKILCMHGGIGRSI--NHVSEIED--------LKRPLTM 200 (311)
T ss_pred ------------------HHH---HHHHHHHHhCchhheecccEEEEccCCCCCC--CcHHHHhh--------cCCCCCC
Confidence 000 12567899999988776 5777899999852 23444443 11111 0
Q ss_pred CCCCCcccccCCCCcccccccccCC------cc---chhh-hhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCe
Q 016381 275 NPKIPFIATRGYDSVVWNRLYSRDI------SD---LEDY-QISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCS 344 (390)
Q Consensus 275 ~~~~~~~~~~~~~~~lW~r~~~~~~------~~---~~~~-~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~ 344 (390)
....+. ..+.+|+||...+. .. |+.. .+.|+.+++.+||++++++.|||||+++++|+....+++
T Consensus 201 ~~~~~~-----~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~ 275 (311)
T cd07419 201 EFGEQV-----VMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGK 275 (311)
T ss_pred CCCCcc-----eeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCe
Confidence 111122 13689999865321 01 3222 268999999999999999999999999999998878999
Q ss_pred EEEEEecCCC-CccCCCceEEEEeCCe---EEEEe
Q 016381 345 IWRIDVGMSS-GVLNSRPEVLEITDNK---ARVIS 375 (390)
Q Consensus 345 ~i~IDtG~~~-g~~~g~~~~L~i~~~~---~~~~~ 375 (390)
+++|.++..+ +..++.++++.++++. +++++
T Consensus 276 ~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~ 310 (311)
T cd07419 276 LITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIH 310 (311)
T ss_pred EEEEecCCcccCCCCceEEEEEECCCCcEeEEEeC
Confidence 9999987665 2345778999998873 45544
No 11
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-37 Score=275.63 Aligned_cols=258 Identities=18% Similarity=0.258 Sum_probs=196.2
Q ss_pred CCCeEecCCCCccccCCCCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHH
Q 016381 40 SKPIVVSGNTPTFVSAPGRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLR 119 (390)
Q Consensus 40 ~~~~~~~~~~p~~~~~~~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~ 119 (390)
.|...+.-+||+++.... ++.|+|||||++++|..+++.-|-++ .+.++|||||||||-.|+|++.+|.
T Consensus 26 ~~~~eiL~~E~NV~~i~t-PvtvcGDIHGQf~Dllelf~igG~~~----------~t~YLFLGDyVDRG~~SvEt~lLLl 94 (303)
T KOG0372|consen 26 AKVREILVEESNVQRIDT-PVTVCGDIHGQFYDLLELFRIGGDVP----------ETNYLFLGDYVDRGYYSVETFLLLL 94 (303)
T ss_pred HHHHHHHhcCCCceecCC-CcEEeecccchHHHHHHHHHhCCCCC----------CCceEeecchhccccchHHHHHHHH
Confidence 445567789999999888 99999999999999999999766543 5689999999999999999999999
Q ss_pred HhHHHHhhcCCcEEEEcCCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhcccccCC
Q 016381 120 SLDMQAKAEGGAVFQVNGNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNYWG 199 (390)
Q Consensus 120 ~l~~~~~~~g~~v~~lrGNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 199 (390)
.||.++|+ +|++||||||.+.+...++| ++|| +..|| ++..|.
T Consensus 95 ~lK~rYP~---ritLiRGNHEsRqitqvYGF-----Y~Ec----------------------------lrKYG-~~~vWr 137 (303)
T KOG0372|consen 95 ALKVRYPD---RITLIRGNHESRQITQVYGF-----YDEC----------------------------LRKYG-SANVWR 137 (303)
T ss_pred HHhhcCcc---eeEEeeccchhhhhhhhhhH-----HHHH----------------------------HHHcC-ChHHHH
Confidence 99999886 99999999999999888875 3333 11222 111110
Q ss_pred CchhhhhhhhhhhhhhhcCCCCchhhHhhcCCcEEEeCCEEE-EecCCCCCccccChhhccHHHHHHHhcCcCCCCCCCC
Q 016381 200 PLNLVKRQKGVIARSVLFRPGGPMACELARHGVVLKVNDWVF-CHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNPKI 278 (390)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~lf-vHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~ 278 (390)
-..+.|..||+.++|++.+| ||||++|.. ..++++.. ..+....++.
T Consensus 138 ----------------------~c~eiFdyL~l~aiid~kifCVHGGlSP~i--~~lDqIr~--------lDR~~Eiph~ 185 (303)
T KOG0372|consen 138 ----------------------YCTEIFDYLSLAAIIDGKIFCVHGGLSPSI--QTLDQIRV--------LDRKQEVPHD 185 (303)
T ss_pred ----------------------HHHHHHHhhhHhheecCcEEEEcCCCCcch--hhHHHHHH--------hhccccCCCC
Confidence 03467888999888876555 799999952 23444433 3222222222
Q ss_pred CcccccCCCCcccccccccCCcc--chhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecCCCCc
Q 016381 279 PFIATRGYDSVVWNRLYSRDISD--LEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMSSGV 356 (390)
Q Consensus 279 ~~~~~~~~~~~lW~r~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~~g~ 356 (390)
.. ..+++|+||....... .++.++.||.+++++|++.++...|++.|+-+.+|++.+++++++|+.+...+-+
T Consensus 186 g~-----m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~eGyk~~F~~~v~TVWSAPNYCY 260 (303)
T KOG0372|consen 186 GA-----MCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQLVMEGYKWHFDEKVVTVWSAPNYCY 260 (303)
T ss_pred Cc-----chheeccCcccCCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHHHHHhhHHHhcCCceEEEecCCchhh
Confidence 22 3579999997665432 2344788999999999999999999999999999999999999999998666522
Q ss_pred -cCCCceEEEEeCC---eEEEEecCCCCCc
Q 016381 357 -LNSRPEVLEITDN---KARVISGKRDTFT 382 (390)
Q Consensus 357 -~~g~~~~L~i~~~---~~~~~~~~~~~~~ 382 (390)
-++..++|+|+.+ .++++..++...+
T Consensus 261 rCGN~AsIl~lde~~~~~F~vFeaa~~~~~ 290 (303)
T KOG0372|consen 261 RCGNVAAILELDEDLDKDFRVFEAAPQESR 290 (303)
T ss_pred hcCChHHheeeccccCcceEeeecchhhhc
Confidence 3466899999976 3888887775444
No 12
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=1.6e-35 Score=282.98 Aligned_cols=256 Identities=13% Similarity=0.172 Sum_probs=186.1
Q ss_pred ccCCCeEecCCCCccccCCCCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHH
Q 016381 38 TASKPIVVSGNTPTFVSAPGRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSL 117 (390)
Q Consensus 38 ~~~~~~~~~~~~p~~~~~~~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~ 117 (390)
.-.+...++++||+++...+ +++|||||||++.+|.++++..+... .+.++|||||||||+.|.|++.+
T Consensus 24 l~~~~~~il~~e~~~~~i~~-~i~vvGDIHG~~~~L~~l~~~~~~~~----------~~~~lfLGDyVDRG~~s~evl~l 92 (303)
T PTZ00239 24 ICERAKEIFLEESNVQPVRA-PVNVCGDIHGQFYDLQALFKEGGDIP----------NANYIFIGDFVDRGYNSVETMEY 92 (303)
T ss_pred HHHHHHHHHHhCCCeEecCC-CEEEEEeCCCCHHHHHHHHHhcCCCC----------CceEEEeeeEcCCCCCHHHHHHH
Confidence 34556678899999988876 89999999999999999999887642 46899999999999999999999
Q ss_pred HHHhHHHHhhcCCcEEEEcCCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhccccc
Q 016381 118 LRSLDMQAKAEGGAVFQVNGNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNY 197 (390)
Q Consensus 118 l~~l~~~~~~~g~~v~~lrGNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~ 197 (390)
++.++..+|. +|++||||||.+.++..++|. +|+ ...|+..
T Consensus 93 l~~lk~~~p~---~v~llrGNHE~~~~~~~~gf~-----~e~----------------------------~~ky~~~--- 133 (303)
T PTZ00239 93 LLCLKVKYPG---NITLLRGNHESRQCTQVYGFY-----EEI----------------------------LRKYGNS--- 133 (303)
T ss_pred HHHhhhcCCC---cEEEEecccchHHHhhhcChH-----HHH----------------------------HHHhcCh---
Confidence 9999988764 999999999998776655431 111 1111100
Q ss_pred CCCchhhhhhhhhhhhhhhcCCCCchhhHhhcCCcEEEeCC-EEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCC
Q 016381 198 WGPLNLVKRQKGVIARSVLFRPGGPMACELARHGVVLKVND-WVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNP 276 (390)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~-~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~ 276 (390)
..+ ..+.++|..||+++++++ +++||||++|.. ..+++++. ..++...+
T Consensus 134 -----------------~~~---~~~~~~f~~LPlaaii~~~i~cvHgGi~p~~--~~l~~i~~--------i~r~~~~~ 183 (303)
T PTZ00239 134 -----------------NPW---RLFMDVFDCLPLAALIEGQILCVHGGLSPDM--RTIDQIRT--------IDRKIEIP 183 (303)
T ss_pred -----------------hHH---HHHHHHHHhCchheEEcCeEEEEcCccCccc--ccHhhhcc--------ccCCCCCC
Confidence 000 115678999999988876 666899999852 23443332 22221111
Q ss_pred CCCcccccCCCCcccccccccCC--ccchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeC-CeEEEEEecCC
Q 016381 277 KIPFIATRGYDSVVWNRLYSRDI--SDLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYN-CSIWRIDVGMS 353 (390)
Q Consensus 277 ~~~~~~~~~~~~~lW~r~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~-~~~i~IDtG~~ 353 (390)
.... ..+.+|+||..... ...++.++.||++++++||++++.+.|||||+++.+|++..++ ++++||.++..
T Consensus 184 ~~~~-----~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~iTvfSa~~ 258 (303)
T PTZ00239 184 HEGP-----FCDLMWSDPEEVEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVMEGYKYWFPDQNLVTVWSAPN 258 (303)
T ss_pred CCCC-----ceeeEecCccccCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhccceEEEeCCCeEEEEECCCc
Confidence 1111 24699999864322 1223346789999999999999999999999999999986654 45999998665
Q ss_pred CC-ccCCCceEEEEeCC---eEEEEecCC
Q 016381 354 SG-VLNSRPEVLEITDN---KARVISGKR 378 (390)
Q Consensus 354 ~g-~~~g~~~~L~i~~~---~~~~~~~~~ 378 (390)
+. ..++.+++|.++++ .+.++.+.+
T Consensus 259 Y~~~~~N~~ail~i~~~~~~~~~~~~~~~ 287 (303)
T PTZ00239 259 YCYRCGNIASILCLDENLQQTWKTFKEVP 287 (303)
T ss_pred ccCCCCceEEEEEECCCCcEeeEEeeCCC
Confidence 52 24567899999987 366666544
No 13
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=8.7e-35 Score=283.17 Aligned_cols=265 Identities=16% Similarity=0.115 Sum_probs=178.5
Q ss_pred hccCCCeEecCCCCccccCCC---CeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHH
Q 016381 37 ATASKPIVVSGNTPTFVSAPG---RRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELA 113 (390)
Q Consensus 37 ~~~~~~~~~~~~~p~~~~~~~---~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~e 113 (390)
++-.+...++.+||+++.... .+++|||||||++.+|..+|+.+|+.. .++.+||||||||||++|+|
T Consensus 42 ~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~~g~~~---------~~~~ylFLGDyVDRGp~SlE 112 (377)
T cd07418 42 SLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLEDAGFPD---------QNRFYVFNGDYVDRGAWGLE 112 (377)
T ss_pred HHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHHhCCCC---------CCceEEEeccccCCCCChHH
Confidence 345566678899999987751 389999999999999999999988753 24579999999999999999
Q ss_pred HHHHHHHhHHHHhhcCCcEEEEcCCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhc
Q 016381 114 ILSLLRSLDMQAKAEGGAVFQVNGNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRL 193 (390)
Q Consensus 114 vl~~l~~l~~~~~~~g~~v~~lrGNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~ 193 (390)
|+.+++.++..+|. +|++||||||.+.++..++|.. ++. ..|+.
T Consensus 113 vl~lL~~lki~~p~---~v~lLRGNHE~~~i~~~~Gf~~-----E~~----------------------------~~y~~ 156 (377)
T cd07418 113 TFLLLLSWKVLLPD---RVYLLRGNHESKFCTSMYGFEQ-----EVL----------------------------TKYGD 156 (377)
T ss_pred HHHHHHHHhhccCC---eEEEEeeecccccchhhcccch-----hhh----------------------------hhcCc
Confidence 99999999988764 9999999999987765544321 110 01100
Q ss_pred ccccCCCchhhhhhhhhhhhhhhcCCCCchhhHhhcCCcEEEeCC-EEEEecCCCCCccccC-----------hhhc---
Q 016381 194 SRNYWGPLNLVKRQKGVIARSVLFRPGGPMACELARHGVVLKVND-WVFCHGGLLPHHVAYG-----------LERM--- 258 (390)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~-~lfvHgGi~p~~~~~~-----------l~~~--- 258 (390)
. + ..++ ..+.+||+.||+++++++ +++|||||++...... +...
T Consensus 157 ~--------------~----~~l~---~~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~ 215 (377)
T cd07418 157 K--------------G----KHVY---RKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPES 215 (377)
T ss_pred h--------------H----HHHH---HHHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccc
Confidence 0 0 0000 226789999999999875 6667999965421000 0000
Q ss_pred -cH--HHHHHHhcCcCCCCCC-CCCcccccCCCCcccccccccCC---ccchhhhhhhhHHHHHHHHHHhCCcEEEEccc
Q 016381 259 -NN--EVSLWMKGLSECGNNP-KIPFIATRGYDSVVWNRLYSRDI---SDLEDYQISQINAVLQDTLRAVGAKAMVVGHT 331 (390)
Q Consensus 259 -~~--~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~lW~r~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt 331 (390)
++ ....-|....++...+ ..... .-..+++|+||..... ...++.++.||.+++++||++++.+.|||||+
T Consensus 216 ~~~~l~sl~~i~~i~r~~~~~~~~~~~--~i~~dlLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe 293 (377)
T cd07418 216 ESLKLGTLDDLMKARRSVLDPPGEGSN--LIPGDVLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHE 293 (377)
T ss_pred cCCCCCCHHHHhhCCCCCCCCCCCCcc--ccceeeEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCC
Confidence 00 0111122222211000 00000 0023799999864322 11233468899999999999999999999999
Q ss_pred c------------CCCCceeeeC---CeEEEEEecCCCC-------ccCCCceEEEEeCC
Q 016381 332 P------------QFAGANCEYN---CSIWRIDVGMSSG-------VLNSRPEVLEITDN 369 (390)
Q Consensus 332 ~------------~~~G~~~~~~---~~~i~IDtG~~~g-------~~~g~~~~L~i~~~ 369 (390)
+ +.+|++..++ ++++||.++..+. .+++.++++.+..+
T Consensus 294 ~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTvFSa~nY~~~~~~~~~~~N~ga~~~~~~~ 353 (377)
T cd07418 294 GPDAREKRPGLAGMNKGYTVDHDVESGKLITLFSAPDYPQFQATEERYNNKGAYIILQPP 353 (377)
T ss_pred CcccccccccchhhhCceEEeccCCCCcEEEEecCCccccccccccccCcceEEEEEecC
Confidence 6 5679887665 8999999966653 24677888888764
No 14
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=3.8e-35 Score=282.21 Aligned_cols=257 Identities=19% Similarity=0.313 Sum_probs=195.3
Q ss_pred hhccCCCeEecCCCCccccCCCCeEEEEccCCCCHHHHHHHHHHcC-CCCCCCCCCcCCCccEEEEeCCccCCCCChHHH
Q 016381 36 AATASKPIVVSGNTPTFVSAPGRRIVAVGDLHGDLDQARCALEMAG-VLSSDGLDLWTGGESVLIQLGDVLDRGEDELAI 114 (390)
Q Consensus 36 ~~~~~~~~~~~~~~p~~~~~~~~~i~vIGDiHG~~~~l~~lL~~~g-~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~ev 114 (390)
..+-.++..++..+|+++..++ +|.|+|||||++.+|.+++...| +++ +.+++|||||||||++|+|+
T Consensus 38 ~~l~~~~~~if~~~~~l~e~~a-PV~i~GDiHGq~~DLlrlf~~~g~~pp----------~~~ylFLGDYVDRG~~slE~ 106 (331)
T KOG0374|consen 38 IKLCDKAREIFLSQPTLLELSA-PVKIVGDIHGQFGDLLRLFDLLGSFPP----------DQNYVFLGDYVDRGKQSLET 106 (331)
T ss_pred HHHHHHHHHHhcCCCceeecCC-CEEEEccCcCCHHHHHHHHHhcCCCCC----------cccEEEecccccCCccceEE
Confidence 3456677888999999999999 99999999999999999999998 652 56899999999999999999
Q ss_pred HHHHHHhHHHHhhcCCcEEEEcCCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhcc
Q 016381 115 LSLLRSLDMQAKAEGGAVFQVNGNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLS 194 (390)
Q Consensus 115 l~~l~~l~~~~~~~g~~v~~lrGNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~ 194 (390)
+.+++++|.++|. +|+++|||||.+.++..++ .++||. .+|-. ...|
T Consensus 107 i~LL~a~Ki~yp~---~~~lLRGNHE~~~in~~yG-----FydE~~--rr~~~---------~~~w-------------- 153 (331)
T KOG0374|consen 107 ICLLFALKIKYPE---NVFLLRGNHECASINRIYG-----FYDECK--RRYGE---------IKLW-------------- 153 (331)
T ss_pred eehhhhhhhhCCc---eEEEeccccccccccceee-----eHHHHH--Hhcch---------HHHH--------------
Confidence 9999999999875 9999999999998885554 345553 11110 0111
Q ss_pred cccCCCchhhhhhhhhhhhhhhcCCCCchhhHhhcCCcEEEeCCEEE-EecCCCCCccccChhhccHHHHHHHhcCcCCC
Q 016381 195 RNYWGPLNLVKRQKGVIARSVLFRPGGPMACELARHGVVLKVNDWVF-CHGGLLPHHVAYGLERMNNEVSLWMKGLSECG 273 (390)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~lf-vHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~ 273 (390)
..+...|..||+++.|++.++ +|||++|.. ..+++++ ...++.
T Consensus 154 --------------------------~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l--~~~~~i~--------~i~rp~ 197 (331)
T KOG0374|consen 154 --------------------------KAFNDAFNCLPLAALIDGKILCMHGGLSPHL--KSLDQIR--------AIPRPT 197 (331)
T ss_pred --------------------------HHHHHHHhhCchhheecceEEEecCCCChhh--cChHHHh--------hccCCc
Confidence 114567899999988876555 699999973 3344433 333332
Q ss_pred CCCCCCcccccCCCCccccccccc---CCccchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEe
Q 016381 274 NNPKIPFIATRGYDSVVWNRLYSR---DISDLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDV 350 (390)
Q Consensus 274 ~~~~~~~~~~~~~~~~lW~r~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDt 350 (390)
..+...+ ..+++|+++-.. ....-++.++.|+.+++++++++++.++||+||+++.+||+...+.+++||.+
T Consensus 198 ~~~~~gl-----l~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa~r~lvTIFS 272 (331)
T KOG0374|consen 198 DSPDKGL-----LCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFAGRKLVTIFS 272 (331)
T ss_pred CCCccce-----eeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceEEEcCccccccceEecCceEEEEec
Confidence 2222222 247899998543 11222334577999999999999999999999999999998877888999999
Q ss_pred cCCC-CccCCCceEEEEeCC---eEEEEecC
Q 016381 351 GMSS-GVLNSRPEVLEITDN---KARVISGK 377 (390)
Q Consensus 351 G~~~-g~~~g~~~~L~i~~~---~~~~~~~~ 377 (390)
+..+ |.+++..+++.++.+ .+.++++.
T Consensus 273 AP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 273 APNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred CchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 7776 445667799999987 37777773
No 15
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=100.00 E-value=5.5e-33 Score=260.16 Aligned_cols=231 Identities=16% Similarity=0.143 Sum_probs=148.6
Q ss_pred CeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcC
Q 016381 58 RRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNG 137 (390)
Q Consensus 58 ~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrG 137 (390)
|+++||||||||++.|.++|+++++.. +....+.+..+++|||||||||||+|.+||++++++.. .+++++|+|
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~-~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~~-----~~~~~~l~G 74 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNW-SSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELVE-----KKAAYYVPG 74 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCc-ccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHhh-----CCCEEEEeC
Confidence 689999999999999999999998742 11112234568999999999999999999999998853 248999999
Q ss_pred CchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchh-hhHHhhhcccccCCCchhhhhhhhhhhhhhh
Q 016381 138 NHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSE-RWKEDRRLSRNYWGPLNLVKRQKGVIARSVL 216 (390)
Q Consensus 138 NHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (390)
|||.+++ +++... ..|+.+|+ +|+++|....... +. .+
T Consensus 75 NHE~~~l-------------------~~~~~~--------~~~~~~gg~~tl~~~~~~~~~~--------~~------~~ 113 (245)
T PRK13625 75 NHCNKLY-------------------RFFLGR--------NVTIAHGLETTVAEYEALPSHK--------QN------MI 113 (245)
T ss_pred ccHHHHH-------------------HHHhCC--------CccccchhHhHHHHHhccChhh--------HH------HH
Confidence 9999854 233211 13666776 7888774221100 00 00
Q ss_pred cCCCCchhhHhhcCCcEEEe--CCEEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCCCCCcccccCCCCcccccc
Q 016381 217 FRPGGPMACELARHGVVLKV--NDWVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNPKIPFIATRGYDSVVWNRL 294 (390)
Q Consensus 217 ~~~~~~~~~~l~~lP~~~~i--~~~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lW~r~ 294 (390)
...+.+||+++|+++.+ ++++|||||+.|.+.....+++.. ...|-+ ... . ......|.+.
T Consensus 114 ---~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~~~~~~~~~~~-~~l~~~-~~~-----~-------~~~~~~~~~~ 176 (245)
T PRK13625 114 ---KEKFITLYEQAPLYHILDEGRLVVAHAGIRQDYIGRQDKKVQT-FVLYGD-ITG-----E-------KHPDGSPVRR 176 (245)
T ss_pred ---HHHHHHHHHhCCceEEEeCCCEEEEECCCChHhcccchhhhhh-HHhhcc-ccC-----C-------cCCCCCeeee
Confidence 02367899999999877 579999999987532222222111 111100 000 0 0011222211
Q ss_pred cccCCccchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecCCCCccCCCceEEEEeCCeEEEE
Q 016381 295 YSRDISDLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMSSGVLNSRPEVLEITDNKARVI 374 (390)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~~g~~~g~~~~L~i~~~~~~~~ 374 (390)
.... ...+.+.+|+||||+.... ..++.+.|||||++| |+++++++.+..+..+
T Consensus 177 ~~~~--------------------~~~g~~~vV~GHtp~~~~~---~~~~~i~IDtGa~~g---G~Ltal~l~~~~~~~v 230 (245)
T PRK13625 177 DWAK--------------------EYKGTAWIVYGHTPVKEPR---FVNHTVNIDTGCVFG---GRLTALRYPEMETVSV 230 (245)
T ss_pred ccch--------------------hcCCCcEEEECCCCCccce---ecCCeEEEECcCccC---CEEEEEECCCCcEEEE
Confidence 0000 0124568999999996422 235789999999986 9999999998876555
Q ss_pred ecCC
Q 016381 375 SGKR 378 (390)
Q Consensus 375 ~~~~ 378 (390)
....
T Consensus 231 ~~~~ 234 (245)
T PRK13625 231 PSSL 234 (245)
T ss_pred ECcc
Confidence 5444
No 16
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=100.00 E-value=3.9e-34 Score=268.15 Aligned_cols=243 Identities=19% Similarity=0.205 Sum_probs=159.5
Q ss_pred CeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcC
Q 016381 58 RRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNG 137 (390)
Q Consensus 58 ~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrG 137 (390)
|++|||||||||+++|+++|++++|. ++.|++||+||+|||||+|++||++++++. .++++|+|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~---------~~~D~l~~lGDlVdRGP~slevL~~l~~l~-------~~~~~VlG 64 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFD---------PGQDTLWLTGDLVARGPGSLEVLRYVKSLG-------DAVRLVLG 64 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcC---------CCCCEEEEeCCccCCCCCHHHHHHHHHhcC-------CCeEEEEC
Confidence 67999999999999999999999874 235799999999999999999999999873 36889999
Q ss_pred CchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhcccccCCCchhhhhhhhhhhhhhhc
Q 016381 138 NHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNYWGPLNLVKRQKGVIARSVLF 217 (390)
Q Consensus 138 NHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (390)
|||.+++....++......+ .+..|+..
T Consensus 65 NHD~~lL~~~~g~~~~~~~d------------------~l~~~l~a---------------------------------- 92 (279)
T TIGR00668 65 NHDLHLLAVFAGISRNKPKD------------------RLDPLLEA---------------------------------- 92 (279)
T ss_pred hhHHHHHHHhcCCCccCchH------------------HHHHHHHc----------------------------------
Confidence 99998775433321111101 11111100
Q ss_pred CCCCchhhHhhcCCcEEEeC--CEEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCCCCCcccccCCCCccccccc
Q 016381 218 RPGGPMACELARHGVVLKVN--DWVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNPKIPFIATRGYDSVVWNRLY 295 (390)
Q Consensus 218 ~~~~~~~~~l~~lP~~~~i~--~~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lW~r~~ 295 (390)
....++.+||+++|+++... ++++||||+.|.|.-....+...++...+++..... ....++ |..+..|++..
T Consensus 93 ~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~l~~a~~~a~eve~~L~~~~~~~---fl~~my--gn~p~~W~~~l 167 (279)
T TIGR00668 93 PDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPF---FLDAMY--GDMPNRWSPEL 167 (279)
T ss_pred cCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCcHHHHHHHHHHHHHHHcCCCHHH---HHHHhh--CCCCccCCCCC
Confidence 01245789999999998765 599999999997644444455566666666543100 011112 23345687654
Q ss_pred cc--------CCccchhh---------hhhhhHHH----HHHHHH----HhCCcEEEEccccCCCCceeeeCCeEEEEEe
Q 016381 296 SR--------DISDLEDY---------QISQINAV----LQDTLR----AVGAKAMVVGHTPQFAGANCEYNCSIWRIDV 350 (390)
Q Consensus 296 ~~--------~~~~~~~~---------~~~~~~~~----~~~~l~----~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDt 350 (390)
.. +..+|+++ .++..++. +....+ ......||+||+....|... ..+++.+||
T Consensus 168 ~g~~r~r~i~n~~TRmR~c~~~g~ld~~~k~~~~~~p~~~~PWf~~~~~~~~~~~ivfGHWaaL~g~~~--~~~~~~lDt 245 (279)
T TIGR00668 168 QGLARLRFIINAFTRMRFCFPNGQLDMYSKESPEDAPAPLKPWFAIPGPVYEEYSIAFGHWASLEGEGT--PEGIYALDT 245 (279)
T ss_pred chHHHHHHHHHHHhhheeeCCCCCCcccccCCcccCCCCCCCcccCCCccCCCCcEEEeehhhccCCCC--CCCeEEccc
Confidence 33 12333332 11111111 111111 12445799999999877653 468999999
Q ss_pred cCCCCccCCCceEEEEeCCeEEEEecCC
Q 016381 351 GMSSGVLNSRPEVLEITDNKARVISGKR 378 (390)
Q Consensus 351 G~~~g~~~g~~~~L~i~~~~~~~~~~~~ 378 (390)
||++| |.++++.+++++...+.+.+
T Consensus 246 GCvWG---g~Lta~~l~~~~~~~~~~~~ 270 (279)
T TIGR00668 246 GCCWG---GRLTCLRWEDKQYFTQPSNR 270 (279)
T ss_pred ccccC---cceEEEEecCCCEEEEEccc
Confidence 99998 99999999998754444443
No 17
>PHA02239 putative protein phosphatase
Probab=100.00 E-value=1.5e-32 Score=254.75 Aligned_cols=213 Identities=18% Similarity=0.258 Sum_probs=143.6
Q ss_pred CeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcC
Q 016381 58 RRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNG 137 (390)
Q Consensus 58 ~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrG 137 (390)
|++++||||||+++.|.++++++.... .+.+.+||+|||||||++|.++++.++.+.. .+.++++|+|
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~--------~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~----~~~~~~~l~G 68 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNER--------KPEETIVFLGDYVDRGKRSKDVVNYIFDLMS----NDDNVVTLLG 68 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcC--------CCCCEEEEecCcCCCCCChHHHHHHHHHHhh----cCCCeEEEEC
Confidence 689999999999999999999874321 1246899999999999999999999988753 2347999999
Q ss_pred CchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHH-hhhhcchh-hhHHhhhcccccCCCch---hhhhhhh-hh
Q 016381 138 NHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAF-VGWVGMSE-RWKEDRRLSRNYWGPLN---LVKRQKG-VI 211 (390)
Q Consensus 138 NHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~w~~~g~-~~~~~~~~~~~~~~~~~---~~~~~~~-~~ 211 (390)
|||.+++ +++.+.+. .... ..|+++|| +|+.+|+.......... ..+.+.. +.
T Consensus 69 NHE~~~l-------------------~~~~~~~~--~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~ 127 (235)
T PHA02239 69 NHDDEFY-------------------NIMENVDR--LSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIK 127 (235)
T ss_pred CcHHHHH-------------------HHHhCchh--cccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhh
Confidence 9999854 34433210 0011 36999998 99999975433110000 0000000 00
Q ss_pred h-hhhhcC--CCCchhhHhhcCCcEEEeCCEEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCCCCCcccccCCCC
Q 016381 212 A-RSVLFR--PGGPMACELARHGVVLKVNDWVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNPKIPFIATRGYDS 288 (390)
Q Consensus 212 ~-~~~~~~--~~~~~~~~l~~lP~~~~i~~~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 288 (390)
. ...+.. ...++..|++++|++...++++|||||+.| ..++++++.+.
T Consensus 128 ~~~~~~~~~~~~~~~~~fl~~lp~~~~~~~~ifVHAGi~p---~~~~~~q~~~~-------------------------- 178 (235)
T PHA02239 128 SELKKLKESDDYRKFKILMVNCRKYYKEDKYIFSHSGGVS---WKPVEEQTIDQ-------------------------- 178 (235)
T ss_pred hhhhhcccchhhHHHHHHHHhCcceEEECCEEEEeCCCCC---CCChhhCCHhH--------------------------
Confidence 0 000100 013567799999999999999999999998 35677776543
Q ss_pred cccccccccCCccchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecCCCC
Q 016381 289 VVWNRLYSRDISDLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMSSG 355 (390)
Q Consensus 289 ~lW~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~~g 355 (390)
++|.|.+ .. ....+.||+||||+..+.. ...++.|.|||||++|
T Consensus 179 llWiR~f-~~---------------------~~~g~~vV~GHTp~~~~~~-~~~~~~I~IDtGa~~g 222 (235)
T PHA02239 179 LIWSRDF-QP---------------------RKDGFTYVCGHTPTDSGEV-EINGDMLMCDVGAVFR 222 (235)
T ss_pred eEEeccc-CC---------------------CCCCcEEEECCCCCCCCcc-cccCCEEEeecCcccc
Confidence 4555542 10 1135689999999975432 2235689999999986
No 18
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=100.00 E-value=1.9e-32 Score=259.18 Aligned_cols=243 Identities=16% Similarity=0.174 Sum_probs=154.4
Q ss_pred CeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcC
Q 016381 58 RRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNG 137 (390)
Q Consensus 58 ~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrG 137 (390)
|+++||||||||++.|+++|+++++.. ..|++||+||+|||||+|.+|+++++++. .++++|+|
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~---------~~D~li~lGDlVdrGp~s~~vl~~l~~l~-------~~~~~VlG 64 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDP---------AKDTLWLVGDLVNRGPDSLEVLRFVKSLG-------DSAVTVLG 64 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCC---------CCCEEEEeCCccCCCcCHHHHHHHHHhcC-------CCeEEEec
Confidence 789999999999999999999987742 35799999999999999999999999872 37999999
Q ss_pred CchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhcccccCCCchhhhhhhhhhhhhhhc
Q 016381 138 NHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNYWGPLNLVKRQKGVIARSVLF 217 (390)
Q Consensus 138 NHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (390)
|||.+++....+..... +..|+.++...
T Consensus 65 NHD~~ll~~~~g~~~~~-----------------------------~~~~l~~~l~~----------------------- 92 (275)
T PRK00166 65 NHDLHLLAVAAGIKRNK-----------------------------KKDTLDPILEA----------------------- 92 (275)
T ss_pred ChhHHHHHhhcCCcccc-----------------------------chhHHHHHHcc-----------------------
Confidence 99998764332211100 00111111000
Q ss_pred CCCCchhhHhhcCCcEEE--eCCEEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCCCCCcccccCCCCccccccc
Q 016381 218 RPGGPMACELARHGVVLK--VNDWVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNPKIPFIATRGYDSVVWNRLY 295 (390)
Q Consensus 218 ~~~~~~~~~l~~lP~~~~--i~~~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lW~r~~ 295 (390)
....++.+||+++|+++. .++++|||||++|.|..........++...+++..... ....++ +.....|++..
T Consensus 93 ~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~---~~~~my--~~~p~~W~~~l 167 (275)
T PRK00166 93 PDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRD---FLANMY--GNEPDRWSPDL 167 (275)
T ss_pred ccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHH---HHHHhc--CCCcCccCccc
Confidence 011347899999999988 45799999999997543333344555555666542110 000111 11222566543
Q ss_pred ccCC--------ccchhhh---------hhhhHHHHHH----HH---H-HhCCcEEEEccccCCCCceeeeCCeEEEEEe
Q 016381 296 SRDI--------SDLEDYQ---------ISQINAVLQD----TL---R-AVGAKAMVVGHTPQFAGANCEYNCSIWRIDV 350 (390)
Q Consensus 296 ~~~~--------~~~~~~~---------~~~~~~~~~~----~l---~-~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDt 350 (390)
.... .+|+++- ++..++...+ .. + ......||+|||++..|... ..+++.|||
T Consensus 168 ~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~G~~~--~~~~~~LDt 245 (275)
T PRK00166 168 TGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAALEGLTT--PPNIIALDT 245 (275)
T ss_pred CchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcccCCccC--CCCeEEeec
Confidence 3221 1222210 0000000000 00 0 01345899999999877754 578999999
Q ss_pred cCCCCccCCCceEEEEeCCeEEEEecCC
Q 016381 351 GMSSGVLNSRPEVLEITDNKARVISGKR 378 (390)
Q Consensus 351 G~~~g~~~g~~~~L~i~~~~~~~~~~~~ 378 (390)
||++| |.++++++++.++..+.+.+
T Consensus 246 Gcvwg---g~Lta~~l~~~~~~~~~~~~ 270 (275)
T PRK00166 246 GCVWG---GKLTALRLEDKQIFQVPCLK 270 (275)
T ss_pred ccccC---CeEEEEEeCCCcEEEEeCcc
Confidence 99997 99999999988876666543
No 19
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=100.00 E-value=4.8e-32 Score=254.03 Aligned_cols=253 Identities=19% Similarity=0.166 Sum_probs=160.9
Q ss_pred CeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcC
Q 016381 58 RRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNG 137 (390)
Q Consensus 58 ~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrG 137 (390)
+++||||||||+++.|+++|+.+..... ......+.+|||||||||||+|.+|+++|+.++..++. .++++|+|
T Consensus 2 ~~iyaIGDIHG~~d~L~~lL~~I~~d~~----~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~--~~vv~LrG 75 (304)
T cd07421 2 RVVICVGDIHGYISKLNNLWLNLQSALG----PSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPK--QRHVFLCG 75 (304)
T ss_pred ceEEEEEeccCCHHHHHHHHHHhhhhcC----cCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccc--cceEEEec
Confidence 4899999999999999999987642100 00123568999999999999999999999998776542 25889999
Q ss_pred CchhhhccccccccCCCCchhhHHHHHHhhhccc----h-H---------HHHHhhhh------------------cchh
Q 016381 138 NHETMNVEGDFRYVDSGGFDECSDFLEYLNDYEN----D-W---------EEAFVGWV------------------GMSE 185 (390)
Q Consensus 138 NHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~----~-~---------~~~~~~w~------------------~~g~ 185 (390)
|||.+++........+ +.+..|.+...+++. + | .-.-..|+ .+|+
T Consensus 76 NHE~~~l~fL~~~p~~---~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg 152 (304)
T cd07421 76 NHDFAFAAFLGVLPRP---SDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDA 152 (304)
T ss_pred CChHHHHhHhhcCCCc---cchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCc
Confidence 9999876532221111 111112211111110 0 0 00123677 6667
Q ss_pred -hhHHhhhcccccCCCchhhhhhhhhhhhhhhcCCCCchhhHhhcCCcEEEeCCE-------------EEEecCCCCCcc
Q 016381 186 -RWKEDRRLSRNYWGPLNLVKRQKGVIARSVLFRPGGPMACELARHGVVLKVNDW-------------VFCHGGLLPHHV 251 (390)
Q Consensus 186 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~-------------lfvHgGi~p~~~ 251 (390)
+|+.|||..... . ..+.+ ...++.+||++||.+...+++ +|||||+.|
T Consensus 153 ~~Tl~SYGv~~~~----------~--~l~~a---vP~~H~~fl~~l~~~~~~~~~~~~~~~g~~~~~lifVHAGlrP--- 214 (304)
T cd07421 153 RPTFESYGVPHGS----------S--DLIKA---VPEEHKKFLRNLVWVHEEDDVCIETEEGLKHCKLIAVHAGLEK--- 214 (304)
T ss_pred HHHHHHcCCCcch----------H--HHHHh---CCHHHHHHHHhCCceEEeCcccccccccccccceEEEEcccCC---
Confidence 999999975431 0 11111 235689999999999999998 999999999
Q ss_pred ccChhhccHHHHHHHhcCcCCCCCCCCCcccccCCCCcccccccccCCccchhhhhhhhHHHHHHHHHHhCCcEEEEccc
Q 016381 252 AYGLERMNNEVSLWMKGLSECGNNPKIPFIATRGYDSVVWNRLYSRDISDLEDYQISQINAVLQDTLRAVGAKAMVVGHT 331 (390)
Q Consensus 252 ~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lW~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt 331 (390)
+.++++|..... .. ....|. .+++|.|...-+.... + .....+||+|||
T Consensus 215 g~pLe~Q~~~L~----~~-----d~~~p~------~~~l~~R~~f~~~~~~---------------~-~~~~~~VVhGHt 263 (304)
T cd07421 215 SNSVEEQLKLLR----TK-----DTSIPK------IAPLSGRKNVWNIPQE---------------L-ADKKTIVVSGHH 263 (304)
T ss_pred CCChHHhhhhhh----cc-----cccccc------ccccccchhhhcCccc---------------c-cCCCeEEEECCC
Confidence 588988876422 00 011122 2577777533221100 0 012468999999
Q ss_pred cCCCCceeeeCCeEEEEEecCCCCccCCCceEEEEeCCeEEEEecC
Q 016381 332 PQFAGANCEYNCSIWRIDVGMSSGVLNSRPEVLEITDNKARVISGK 377 (390)
Q Consensus 332 ~~~~G~~~~~~~~~i~IDtG~~~g~~~g~~~~L~i~~~~~~~~~~~ 377 (390)
.. ....++.+.||||+.++ ++++++.+-..+ ++++..
T Consensus 264 ~~-----~~~~~~Ri~iDtGa~~~---~~l~aa~vlp~~-~~~~~~ 300 (304)
T cd07421 264 GK-----LHIDGLRLIIDEGGGFD---DRPIAAIVLPSK-EIIRDT 300 (304)
T ss_pred CC-----ceecCCEEEEECCCCcC---CceeEEEEeccc-eeEecC
Confidence 43 33567899999999986 787776665543 455533
No 20
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.98 E-value=3e-32 Score=251.52 Aligned_cols=209 Identities=18% Similarity=0.174 Sum_probs=131.9
Q ss_pred EEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcCCch
Q 016381 61 VAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNGNHE 140 (390)
Q Consensus 61 ~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrGNHE 140 (390)
+||||||||++.|+++|+++++... ...|.+..+++|||||||||||+|.+||++++++.. ++++++|+||||
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~--~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~-----~~~~~~l~GNHE 74 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQEL--SGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD-----AGHALAVMGNHE 74 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCcc--ccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc-----CCCEEEEEccCc
Confidence 7999999999999999999887421 112233467999999999999999999999999853 247999999999
Q ss_pred hhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchh--------hhHHhhhcccccCCCchhhhhhhhhhh
Q 016381 141 TMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSE--------RWKEDRRLSRNYWGPLNLVKRQKGVIA 212 (390)
Q Consensus 141 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (390)
.+++.. +.... ....|++.++ .+++++....+
T Consensus 75 ~~ll~~-------------------~~~~~-----~~~~w~~~~~~~~~~~~~~~l~~~~~~~~---------------- 114 (222)
T cd07413 75 FNAIAW-------------------HTKDP-----SGGEWLRAHSKKNLRQHQAFLEQFREHSE---------------- 114 (222)
T ss_pred HHHHHh-------------------hhCCc-----ccchhhhcCCCcccccHHHHHHHHhccch----------------
Confidence 986532 11100 1122333211 22333211000
Q ss_pred hhhhcCCCCchhhHhhcCCcEEEeCCEEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCCCCCcccccCCCCcccc
Q 016381 213 RSVLFRPGGPMACELARHGVVLKVNDWVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNPKIPFIATRGYDSVVWN 292 (390)
Q Consensus 213 ~~~~~~~~~~~~~~l~~lP~~~~i~~~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lW~ 292 (390)
...++.+||+++|+++..++++|||||+.+. ..|++...... ..++.. ....|.
T Consensus 115 ------~~~~~~~~l~~lP~~~~~~~~~~VHAg~~~~-------------l~~~~~~~~~~---~~~~~~----~~~~~~ 168 (222)
T cd07413 115 ------EHKDWLEWFKTLPLFLDLGGVRVVHACWDET-------------LLKGPEIALPE---GHSFVD----KDGIVR 168 (222)
T ss_pred ------hHHHHHHHHhcCCcEEEECCEEEEECCcCHh-------------hccCCCcCCCC---Cceeec----CCCccc
Confidence 1134789999999999999999999998531 12333221000 001100 000010
Q ss_pred cccccCCccchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCC-ceeeeCCeEEEEEecCCCCccCCCceEEEEeCC
Q 016381 293 RLYSRDISDLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAG-ANCEYNCSIWRIDVGMSSGVLNSRPEVLEITDN 369 (390)
Q Consensus 293 r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G-~~~~~~~~~i~IDtG~~~g~~~g~~~~L~i~~~ 369 (390)
+. .. . .. . .+.||+||||+..+ .. ..++.+.|||||+++ |+++++.+.++
T Consensus 169 ~~-~~-------------~----~~---~-~~~Vv~GHt~~~~~~~~--~~~~~i~iDTGA~~~---G~Lta~~~~~~ 219 (222)
T cd07413 169 DN-IR-------------V----KW---W-GKPVFVGHYWLNGEPAP--LNPNVACLDYSAAKG---GKLVAYRWDGE 219 (222)
T ss_pred cc-cc-------------h----hh---c-CCCEEEecCCCCCCCcc--ccCCEEEEecccccC---CeeEEEEcCCc
Confidence 00 00 0 00 0 15799999999643 32 336799999999987 99999999764
No 21
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.98 E-value=1.5e-32 Score=257.29 Aligned_cols=230 Identities=17% Similarity=0.201 Sum_probs=148.3
Q ss_pred EEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcCCc
Q 016381 60 IVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNGNH 139 (390)
Q Consensus 60 i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrGNH 139 (390)
+|||||||||+++|+++|+++++. ++.|++||+||+|||||+|.+||++++++. +++++|+|||
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~---------~~~D~Li~lGDlVdRGp~s~evl~~l~~l~-------~~v~~VlGNH 64 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFD---------PAKDRLWLVGDLVNRGPDSLETLRFVKSLG-------DSAKTVLGNH 64 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCC---------CCCCEEEEecCcCCCCcCHHHHHHHHHhcC-------CCeEEEcCCc
Confidence 589999999999999999998874 235799999999999999999999999984 3799999999
Q ss_pred hhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhcccccCCCchhhhhhhhhhhhhhhcCC
Q 016381 140 ETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNYWGPLNLVKRQKGVIARSVLFRP 219 (390)
Q Consensus 140 E~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (390)
|.+++....+....... .++.++-.. ..
T Consensus 65 D~~ll~~~~g~~~~~~~-----------------------------~t~~~~l~~-----------------------~~ 92 (257)
T cd07422 65 DLHLLAVAAGIKKPKKK-----------------------------DTLDDILNA-----------------------PD 92 (257)
T ss_pred hHHHHHHhcCccccccH-----------------------------hHHHHHHhc-----------------------cc
Confidence 99876533221111100 111111000 01
Q ss_pred CCchhhHhhcCCcEEEeC--CEEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCCCCCcccccCCCCccccccccc
Q 016381 220 GGPMACELARHGVVLKVN--DWVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNPKIPFIATRGYDSVVWNRLYSR 297 (390)
Q Consensus 220 ~~~~~~~l~~lP~~~~i~--~~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lW~r~~~~ 297 (390)
..++.+||+++|+++.++ +++|||||++|.|.-.......+++...+++.... .....++ +..+..|++....
T Consensus 93 ~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~~~~~~~~a~eve~~l~~~~~~---~~~~~my--~~~p~~W~~~l~g 167 (257)
T cd07422 93 RDELLDWLRHQPLLHRDPELGILMVHAGIPPQWSIEQALKLAREVEAALRGPNYR---EFLKNMY--GNEPDRWSDDLTG 167 (257)
T ss_pred hHHHHHHHHhCCCEEEECCccEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHH---HHHHHhh--CCCCcccCcccCc
Confidence 134789999999999987 69999999999765444555666666666653210 0001111 1122366654332
Q ss_pred C--------Cccchhh---------hhhhhHHHH----HHHHH----HhCCcEEEEccccCCCCceeeeCCeEEEEEecC
Q 016381 298 D--------ISDLEDY---------QISQINAVL----QDTLR----AVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGM 352 (390)
Q Consensus 298 ~--------~~~~~~~---------~~~~~~~~~----~~~l~----~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~ 352 (390)
. ..+|+++ .++..++.. ....+ ......||+||+....|... ..+++.+||||
T Consensus 168 ~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~~~~~--~~~~~~lDtGc 245 (257)
T cd07422 168 IDRLRYIVNAFTRMRFCTPDGRLDFSSKGAPEDAPKGLKPWFELPNRKTDDYTIVFGHWAALGGKTR--PNNIIALDTGC 245 (257)
T ss_pred cHHHHHHHHHhhceeeecCCCCEeecccCCcccCCCCCCCceeCCCccCCCCcEEEeecccccCccC--CCCeEEecccc
Confidence 1 1233332 111111111 11111 12455799999999877643 35699999999
Q ss_pred CCCccCCCceEEEEe
Q 016381 353 SSGVLNSRPEVLEIT 367 (390)
Q Consensus 353 ~~g~~~g~~~~L~i~ 367 (390)
++| |.++++.++
T Consensus 246 vwG---~~lta~~~~ 257 (257)
T cd07422 246 VWG---GKLTALRLE 257 (257)
T ss_pred ccC---CeeeEEEeC
Confidence 998 999999864
No 22
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.97 E-value=7e-31 Score=244.53 Aligned_cols=227 Identities=18% Similarity=0.169 Sum_probs=139.6
Q ss_pred CeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcC
Q 016381 58 RRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNG 137 (390)
Q Consensus 58 ~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrG 137 (390)
||+.||||||||+++|+++|+++++...+......++.+++|||||+|||||+|.+||+++++++.. +++++|+|
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~-----~~~~~v~G 75 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA-----GAALCVPG 75 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC-----CcEEEEEC
Confidence 6899999999999999999999988632200011123579999999999999999999999998642 47999999
Q ss_pred CchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchh-hhHHhhhcccccCCCchhhhhhhhhhhhhhh
Q 016381 138 NHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSE-RWKEDRRLSRNYWGPLNLVKRQKGVIARSVL 216 (390)
Q Consensus 138 NHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (390)
|||.++++... .. ..|..+++ .|+.++..... .
T Consensus 76 NHE~~l~~~~~-------------------~~--------~~~~~~~~~~t~~~~~~~~~------------------~- 109 (234)
T cd07423 76 NHDNKLYRKLQ-------------------GR--------NVKITHGLEETVAQLEAESE------------------E- 109 (234)
T ss_pred CcHHHHHHHhc-------------------CC--------CccccCcccchHHHHhhccH------------------H-
Confidence 99998654211 10 00112222 33333310000 0
Q ss_pred cCCCCchhhHhhcCCcEEEeC--CEEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCCCCCcccccCCCCcccccc
Q 016381 217 FRPGGPMACELARHGVVLKVN--DWVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNPKIPFIATRGYDSVVWNRL 294 (390)
Q Consensus 217 ~~~~~~~~~~l~~lP~~~~i~--~~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lW~r~ 294 (390)
...++.+||+++|+++.++ +++|||||+.+.+.....+. ++. ..+|.+.
T Consensus 110 --~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~~~~~~~~--------~~~-------------------~~~~~~~ 160 (234)
T cd07423 110 --FKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEMIGRDSKR--------VRS-------------------FALYGDT 160 (234)
T ss_pred --HHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHhccccchh--------hee-------------------eeecccc
Confidence 0123678999999988764 68889999876421111000 000 0111111
Q ss_pred cccCCccchhhhhhhhHHHHHHHHH-HhCCcEEEEccccCCCCceeeeCCeEEEEEecCCCCccCCCceEEEEeCCeEEE
Q 016381 295 YSRDISDLEDYQISQINAVLQDTLR-AVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMSSGVLNSRPEVLEITDNKARV 373 (390)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~~g~~~g~~~~L~i~~~~~~~ 373 (390)
....... .......+.+ ..+.+.+|+||||+.. +. ..++.+.|||||++| |+++++++.++.+..
T Consensus 161 ~~~~~~~--------~~~~~~~~~~~~~~~~~vv~GHt~~~~-~~--~~~~~i~IDtGav~g---G~Lt~l~~~~~~~~~ 226 (234)
T cd07423 161 TGETDEF--------GLPVRRDWAKEYRGDALVVYGHTPVPE-PR--WLNNTINIDTGCVFG---GKLTALRYPEREIVS 226 (234)
T ss_pred cCCcCCC--------CCccchhhHhhCCCCeEEEECCCCCcc-ce--EeCCEEEEECCCCCC---CcceEEECCCCcEEE
Confidence 0000000 0000000111 1356789999999975 32 234689999999986 999999998877666
Q ss_pred EecCC
Q 016381 374 ISGKR 378 (390)
Q Consensus 374 ~~~~~ 378 (390)
+...+
T Consensus 227 ~~~~~ 231 (234)
T cd07423 227 VPARQ 231 (234)
T ss_pred eeccc
Confidence 66555
No 23
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.97 E-value=8.2e-31 Score=241.46 Aligned_cols=199 Identities=26% Similarity=0.353 Sum_probs=133.2
Q ss_pred CCCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEE
Q 016381 56 PGRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQV 135 (390)
Q Consensus 56 ~~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~l 135 (390)
+.+|++||||||||+++|+++|+++++. +..|++|||||+|||||+|.+||+++++. .+++|
T Consensus 15 ~~~ri~vigDIHG~~~~L~~lL~~i~~~---------~~~D~li~lGDlvDrGp~s~~vl~~l~~~---------~~~~v 76 (218)
T PRK11439 15 QWRHIWLVGDIHGCFEQLMRKLRHCRFD---------PWRDLLISVGDLIDRGPQSLRCLQLLEEH---------WVRAV 76 (218)
T ss_pred CCCeEEEEEcccCCHHHHHHHHHhcCCC---------cccCEEEEcCcccCCCcCHHHHHHHHHcC---------CceEe
Confidence 3459999999999999999999998764 23579999999999999999999999763 68899
Q ss_pred cCCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhcccccCCCchhhhhhhhhhhhhh
Q 016381 136 NGNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNYWGPLNLVKRQKGVIARSV 215 (390)
Q Consensus 136 rGNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (390)
+||||.|+++ ++... ....|..+|++|..... ... ..
T Consensus 77 ~GNHE~~~l~-------------------~~~~~------~~~~w~~~gg~~~~~l~--~~~------------~~---- 113 (218)
T PRK11439 77 RGNHEQMALD-------------------ALASQ------QMSLWLMNGGDWFIALT--DNQ------------QK---- 113 (218)
T ss_pred eCchHHHHHH-------------------HHHCC------ccchhhhCCChhhhhcc--hhh------------hH----
Confidence 9999998643 32221 11357777776632211 000 00
Q ss_pred hcCCCCchhhHhhcCCcEEEe----CCEEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCCCCCcccccCCCCccc
Q 016381 216 LFRPGGPMACELARHGVVLKV----NDWVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNPKIPFIATRGYDSVVW 291 (390)
Q Consensus 216 ~~~~~~~~~~~l~~lP~~~~i----~~~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lW 291 (390)
...++.+||++||+++.+ ++++|||||++.. .. ++.... .....+|
T Consensus 114 ---~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~----~~--------~~~~~~---------------~~~~~~w 163 (218)
T PRK11439 114 ---QAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPAD----VY--------EWQKDV---------------DLHQVLW 163 (218)
T ss_pred ---HHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCC----ch--------hhhccC---------------CccceEE
Confidence 002357899999999875 3689999998321 00 111100 0123577
Q ss_pred ccccccCCccchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecCCCCccCCCceEEEE
Q 016381 292 NRLYSRDISDLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMSSGVLNSRPEVLEI 366 (390)
Q Consensus 292 ~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~~g~~~g~~~~L~i 366 (390)
.|........ . -...+.+.||+||||++... ..++.+.|||||++| |+++++++
T Consensus 164 ~r~~~~~~~~--------------~-~~~~~~~~vv~GHT~~~~~~---~~~~~i~IDtGav~g---g~Lt~l~~ 217 (218)
T PRK11439 164 SRSRLGERQK--------------G-QGITGADHFWFGHTPLRHRV---DIGNLHYIDTGAVFG---GELTLVQL 217 (218)
T ss_pred cChhhhhccc--------------c-ccccCCCEEEECCccCCCcc---ccCCEEEEECCCCCC---CeeEEEEc
Confidence 6642211100 0 01125678999999997532 235689999999986 99999876
No 24
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=99.97 E-value=3e-32 Score=254.67 Aligned_cols=252 Identities=18% Similarity=0.254 Sum_probs=188.5
Q ss_pred EecCCCCccccCCCCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHH
Q 016381 44 VVSGNTPTFVSAPGRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDM 123 (390)
Q Consensus 44 ~~~~~~p~~~~~~~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~ 123 (390)
.++.+|++++..+. +|.|+|||||++.+|+++++.-|- +.+++++|||||||||..|+||+-+|..||.
T Consensus 75 ~llr~Eknmi~v~A-PiTVCGDIHGQf~DLmKLFEVGG~----------PA~t~YLFLGDYVDRGyFSiECvlYLwsLKi 143 (517)
T KOG0375|consen 75 ALLRQEKNMIEVEA-PITVCGDIHGQFFDLMKLFEVGGS----------PANTRYLFLGDYVDRGYFSIECVLYLWSLKI 143 (517)
T ss_pred HHHhcCCceEeccC-CeeEecccchHHHHHHHHHHccCC----------cccceeEeeccccccceeeeehHHHHHHHhc
Confidence 46678999999999 999999999999999999996543 4478999999999999999999999999999
Q ss_pred HHhhcCCcEEEEcCCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhcccccCCCchh
Q 016381 124 QAKAEGGAVFQVNGNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNYWGPLNL 203 (390)
Q Consensus 124 ~~~~~g~~v~~lrGNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~ 203 (390)
.+|. .+++||||||.+-+..+|.|..++ ..+|-... |
T Consensus 144 ~yp~---tl~lLRGNHECrHLT~YFTFKqEc-------~iKYse~v---------------------Y------------ 180 (517)
T KOG0375|consen 144 NYPK---TLFLLRGNHECRHLTEYFTFKQEC-------KIKYSERV---------------------Y------------ 180 (517)
T ss_pred CCCC---eEEEecCCcchhhhHhHhhHHHHH-------hHhccHHH---------------------H------------
Confidence 9875 999999999999887776654322 11221100 0
Q ss_pred hhhhhhhhhhhhhcCCCCchhhHhhcCCcEEEeC-CEEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCCCCCccc
Q 016381 204 VKRQKGVIARSVLFRPGGPMACELARHGVVLKVN-DWVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNPKIPFIA 282 (390)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~-~~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~ 282 (390)
..-.+-|..||+++..+ .+++||||++|+ -.+++.++.. .+....+....
T Consensus 181 -----------------daCmesFd~LPLAAlmNqQflCVHGGlSPE--i~tl~DIr~l--------~RF~EpPa~Gp-- 231 (517)
T KOG0375|consen 181 -----------------DACMESFDCLPLAALMNQQFLCVHGGLSPE--IHTLDDIRKL--------DRFKEPPAFGP-- 231 (517)
T ss_pred -----------------HHHHHHhccchHHHHhcCceEEecCCCCcc--cccHHHHHhh--------hhccCCCccCc--
Confidence 11345688999988876 688899999996 2345555442 22222222222
Q ss_pred ccCCCCcccccccccCC----------ccchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeC------CeEE
Q 016381 283 TRGYDSVVWNRLYSRDI----------SDLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYN------CSIW 346 (390)
Q Consensus 283 ~~~~~~~lW~r~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~------~~~i 346 (390)
.++++|+||...-. ...++-++.|.-.+.-+||++++.=-||+.|+.|..|++-+-+ ..+|
T Consensus 232 ---mCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrksqttGFPSLi 308 (517)
T KOG0375|consen 232 ---MCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLI 308 (517)
T ss_pred ---chhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhcccccCCchhe
Confidence 46899999854321 1223446777889999999999999999999999889864322 3589
Q ss_pred EEEecCCC-CccCCCceEEEEeCC--eEEEEecCCCCC
Q 016381 347 RIDVGMSS-GVLNSRPEVLEITDN--KARVISGKRDTF 381 (390)
Q Consensus 347 ~IDtG~~~-g~~~g~~~~L~i~~~--~~~~~~~~~~~~ 381 (390)
+|.+...+ ..+++..++|...++ .++.+.+.+..|
T Consensus 309 TiFSAPNYLDvYnNKAAvLKYEnNVMNIRQFncSPHPY 346 (517)
T KOG0375|consen 309 TIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPY 346 (517)
T ss_pred eeecCCchhhhhccHHHHhhhhcccceeeccCCCCCCc
Confidence 99987766 446788999999988 478888888765
No 25
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-31 Score=235.38 Aligned_cols=261 Identities=17% Similarity=0.252 Sum_probs=191.7
Q ss_pred eEecCCCCccccCCCCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhH
Q 016381 43 IVVSGNTPTFVSAPGRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLD 122 (390)
Q Consensus 43 ~~~~~~~p~~~~~~~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~ 122 (390)
+.+.-+|.++++... ++.|+|||||++.+|.++++..|-.+ ++.+||+||+||||-.|+|++.+++.|+
T Consensus 32 ~d~L~eEsNvqPV~t-PVTvCGDIHGQFyDL~eLFrtgG~vP----------~tnYiFmGDfVDRGyySLEtfT~l~~Lk 100 (306)
T KOG0373|consen 32 KDILMEESNVQPVST-PVTVCGDIHGQFYDLLELFRTGGQVP----------DTNYIFMGDFVDRGYYSLETFTLLLLLK 100 (306)
T ss_pred HHHHhhhcCccccCC-CeeEeeccchhHHHHHHHHHhcCCCC----------CcceEEeccccccccccHHHHHHHHHHh
Confidence 344456666655555 89999999999999999999877653 4679999999999999999999999999
Q ss_pred HHHhhcCCcEEEEcCCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhcccccCCCch
Q 016381 123 MQAKAEGGAVFQVNGNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNYWGPLN 202 (390)
Q Consensus 123 ~~~~~~g~~v~~lrGNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 202 (390)
.++|+ ++.+||||||.+.+...++| ++||+. +|-+. ..|+.
T Consensus 101 aryP~---~ITLlRGNHEsRqitqVYGF-----ydECq~--KYGna----------------n~wky------------- 141 (306)
T KOG0373|consen 101 ARYPA---KITLLRGNHESRQITQVYGF-----YDECQN--KYGNA----------------NVWKY------------- 141 (306)
T ss_pred hcCCc---eeEEeeccchhhhhhhhhhh-----HHHHHh--hcCCc----------------hHHHH-------------
Confidence 99886 99999999999998888875 444422 11110 01111
Q ss_pred hhhhhhhhhhhhhhcCCCCchhhHhhcCCcEEEeC-CEEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCC-CCCc
Q 016381 203 LVKRQKGVIARSVLFRPGGPMACELARHGVVLKVN-DWVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNP-KIPF 280 (390)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~-~~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~-~~~~ 280 (390)
..+.|.-|+++++|+ ..++||||++|+ -..++++....+ ....+ +.+
T Consensus 142 --------------------cckVFD~LtlaAiID~~vLCVHGGLSPd--irtlDqir~i~R--------~qEiPh~G~- 190 (306)
T KOG0373|consen 142 --------------------CCKVFDFLTLAAIIDEKVLCVHGGLSPD--IRTLDQIRLIER--------NQEIPHEGP- 190 (306)
T ss_pred --------------------HHHHHhhhhHHHHhcCcEEEEcCCCCcc--ceeHHHHHhHHh--------hccCCCCCC-
Confidence 345678888888776 566689999996 344555443222 11111 223
Q ss_pred ccccCCCCcccccccccCCcc--chhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCe-EEEEEecCCCCc-
Q 016381 281 IATRGYDSVVWNRLYSRDISD--LEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCS-IWRIDVGMSSGV- 356 (390)
Q Consensus 281 ~~~~~~~~~lW~r~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~-~i~IDtG~~~g~- 356 (390)
.++++|+||-..+... .++-++.||.+++.+|...++.++|.+.|+-+.+|++..++++ +.++.+...+-+
T Consensus 191 -----fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQLV~EG~KymF~eK~lvTVWSAPNYCYR 265 (306)
T KOG0373|consen 191 -----FCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYR 265 (306)
T ss_pred -----ccceeccChhhhhhheeCCCCcceeechhhhHHHHhccchHHHHhHHHHHHhhHHhccCCCCEEEEecCCchhhh
Confidence 3679999986654432 2344788999999999999999999999999999999887766 999988666522
Q ss_pred cCCCceEEEEeCC---eEEEEecCCCCCc---ccccccC
Q 016381 357 LNSRPEVLEITDN---KARVISGKRDTFT---EFHVVDY 389 (390)
Q Consensus 357 ~~g~~~~L~i~~~---~~~~~~~~~~~~~---~~~~~~~ 389 (390)
-++-.+++.++++ .+++++..+|.-+ .++.+.|
T Consensus 266 CGNvAsi~~~d~~~~r~~k~F~avpd~~~~~p~r~~~pY 304 (306)
T KOG0373|consen 266 CGNVASIMSFDDNLERETKIFSAVPDNSRVIPPRTRAPY 304 (306)
T ss_pred ccCeeeEEEecccCCccceeeeecCCccccCCCCCCCCC
Confidence 3466899999986 4889988887633 3444444
No 26
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=99.97 E-value=1.6e-29 Score=233.57 Aligned_cols=220 Identities=24% Similarity=0.294 Sum_probs=147.2
Q ss_pred EEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcCCch
Q 016381 61 VAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNGNHE 140 (390)
Q Consensus 61 ~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrGNHE 140 (390)
+|||||||+++.|.++|+++++.. .+++|||||+||||+++.+++.+++.++.. +.++++|+||||
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~----------~d~li~lGD~vdrg~~~~~~l~~l~~~~~~----~~~~~~l~GNHe 66 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPP----------NDKLIFLGDYVDRGPDSVEVIDLLLALKIL----PDNVILLRGNHE 66 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCC----------CCEEEEECCEeCCCCCcHHHHHHHHHhcCC----CCcEEEEccCch
Confidence 589999999999999999987632 579999999999999999999999988643 348999999999
Q ss_pred hhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchh-hhHHhhhcccccCCCchhhhhhhhhhhhhhhcCC
Q 016381 141 TMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSE-RWKEDRRLSRNYWGPLNLVKRQKGVIARSVLFRP 219 (390)
Q Consensus 141 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (390)
.+.+....++.... .|. ++ .....+. . .. .
T Consensus 67 ~~~~~~~~~~~~~~------------------------~~~--~~~~~~~~~~----------------~----~~---~ 97 (225)
T cd00144 67 DMLLNFLYGFYDED------------------------EWI--GGTLRLLKKL----------------G----ED---L 97 (225)
T ss_pred hhhhhhhcCCcchh------------------------hcc--chhHHHHHhh----------------C----HH---H
Confidence 98765433221110 000 00 0000000 0 00 0
Q ss_pred CCchhhHhhcCCcEEEeC--CEEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCCCCCcccccCCCCccccccccc
Q 016381 220 GGPMACELARHGVVLKVN--DWVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNPKIPFIATRGYDSVVWNRLYSR 297 (390)
Q Consensus 220 ~~~~~~~l~~lP~~~~i~--~~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lW~r~~~~ 297 (390)
...+..|+..+|+++.++ +++|||||+.|.. ....... .. ...+. ....+|+|+...
T Consensus 98 ~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~---~~~~~~~-------~~------~~~~~-----~~~~lw~r~~~~ 156 (225)
T cd00144 98 WEEFNDVFFYLPLAALIETKKVLCVHGGLSPGL---PLEEQIK-------EE------PEDQL-----PEDLLWSDPLEL 156 (225)
T ss_pred HHHHHHHHHhCcHheEeCCCeEEEEeCCCCCcc---chHHhhh-------cC------ccccc-----ceeeeecCCCCC
Confidence 023568999999999998 8999999998852 2111100 00 00011 235789887654
Q ss_pred CCccchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecCCCCc-cCCCceEEE
Q 016381 298 DISDLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMSSGV-LNSRPEVLE 365 (390)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~~g~-~~g~~~~L~ 365 (390)
....... ....+++.+..++..++.+.||+||||+..+......+++++|||||+++. .+|.+++++
T Consensus 157 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 157 PGGFGSS-RRGGGPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCcCC-CCCCCHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 3221100 011167888999999999999999999988764345688999999999831 236677664
No 27
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=99.95 E-value=3.3e-29 Score=225.47 Aligned_cols=257 Identities=16% Similarity=0.188 Sum_probs=181.1
Q ss_pred hhccCCCeEecCCCCccccCCCCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHH
Q 016381 36 AATASKPIVVSGNTPTFVSAPGRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAIL 115 (390)
Q Consensus 36 ~~~~~~~~~~~~~~p~~~~~~~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl 115 (390)
..+.++.+.+..++.++..... +++|+|||||++++|.++++ +|-.. ++..++|+|||||||+.|.|++
T Consensus 39 ~~lc~~a~~~L~~e~nV~~v~~-pvtvcGDvHGqf~dl~ELfk-iGG~~---------pdtnylfmGDyvdrGy~SvetV 107 (319)
T KOG0371|consen 39 SSLCLLAKEILDKEENVQPVNC-PVTVCGDVHGQFHDLIELFK-IGGLA---------PDTNYLFMGDYVDRGYYSVETV 107 (319)
T ss_pred hhHHHHHHHHHhcccccccccc-ceEEecCcchhHHHHHHHHH-ccCCC---------CCcceeeeeeecccccchHHHH
Confidence 3455667778888888877766 89999999999999999995 44333 2568999999999999999999
Q ss_pred HHHHHhHHHHhhcCCcEEEEcCCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhccc
Q 016381 116 SLLRSLDMQAKAEGGAVFQVNGNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSR 195 (390)
Q Consensus 116 ~~l~~l~~~~~~~g~~v~~lrGNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~ 195 (390)
.++..+|.+||. +|.+||||||.+.+...++| ++ +|+..||. .
T Consensus 108 S~lva~Kvry~~---rvtilrGNHEsrqitqvygf-----yd----------------------------eclRkyg~-a 150 (319)
T KOG0371|consen 108 SLLVALKVRYPD---RVTILRGNHESRQITQVYGF-----YD----------------------------ECLRKYGN-A 150 (319)
T ss_pred HHHHHhhccccc---eeEEecCchHHHHHHHHHhh-----HH----------------------------HHHhhccc-c
Confidence 999999999886 99999999999987665553 11 12222321 1
Q ss_pred ccCCCchhhhhhhhhhhhhhhcCCCCchhhHhhcCCcEEEeCCEEE-EecCCCCCccccChhhccHHHHHHHhcCcCCCC
Q 016381 196 NYWGPLNLVKRQKGVIARSVLFRPGGPMACELARHGVVLKVNDWVF-CHGGLLPHHVAYGLERMNNEVSLWMKGLSECGN 274 (390)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~lf-vHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~ 274 (390)
..| .-+.+.|..+|+.+.|++-+| +|||++|... .++.+....+ +...
T Consensus 151 nvw----------------------~~Ftdlfdy~P~tali~~~ifc~HGgLspsi~--tld~~r~~dr--~~ev----- 199 (319)
T KOG0371|consen 151 NVW----------------------KYFTDLFDYLPLTALIESKIFCLHGGLSPSID--TLDLIRLLDR--IQEV----- 199 (319)
T ss_pred cch----------------------HHhhhhhhccchHhhhccceeeccCCcCcccc--hHHHHHHHHH--hhcc-----
Confidence 111 113456788899988886666 5999999631 2222222111 1111
Q ss_pred CCCCCcccccCCCCcccccccccCCcc--chhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecC
Q 016381 275 NPKIPFIATRGYDSVVWNRLYSRDISD--LEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGM 352 (390)
Q Consensus 275 ~~~~~~~~~~~~~~~lW~r~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~ 352 (390)
....| .++++|+++....... .++-++.|+.+..+.|-.++|.+.+-+.|.-+.+|++.....++++|.+..
T Consensus 200 phegp------mcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~~n~lslisRahqlvm~g~nW~~~~~~vtiFSap 273 (319)
T KOG0371|consen 200 PHEGP------MCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQLVMEGYNWYHLWNVVTIFSAP 273 (319)
T ss_pred cCCCC------hhheeccCcccCCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHHHHHhcccceeeecceeEEccCC
Confidence 01122 3579999986654322 223367788999999999999999999999999999987777888999866
Q ss_pred CCCc-cCCCceEEEEeCCe---EEEEecC
Q 016381 353 SSGV-LNSRPEVLEITDNK---ARVISGK 377 (390)
Q Consensus 353 ~~g~-~~g~~~~L~i~~~~---~~~~~~~ 377 (390)
-+-+ .+++.+++++++.+ +-.+.++
T Consensus 274 nycYrcgn~a~i~e~d~~~~~~f~q~~ps 302 (319)
T KOG0371|consen 274 NYCYRCGNQAAIMERDDTKNYDFLQFDPS 302 (319)
T ss_pred chhhccccHHHHhhhhhccCcceEEecCC
Confidence 6522 34567777777653 4445444
No 28
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.95 E-value=1.7e-27 Score=219.29 Aligned_cols=198 Identities=22% Similarity=0.348 Sum_probs=128.7
Q ss_pred CeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcC
Q 016381 58 RRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNG 137 (390)
Q Consensus 58 ~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrG 137 (390)
.|++||||||||+++|+++|+.+.+. ++.+++||+||+|||||+|.+|++++.+. ++++|+|
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~---------~~~d~l~~lGD~vdrG~~~~~~l~~l~~~---------~~~~v~G 76 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFC---------PETDLLISVGDNIDRGPESLNVLRLLNQP---------WFISVKG 76 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCC---------CCCCEEEECCCCcCCCcCHHHHHHHHhhC---------CcEEEEC
Confidence 38999999999999999999998653 23579999999999999999999998642 6889999
Q ss_pred CchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhcccccCCCchhhhhhhhhhhhhhhc
Q 016381 138 NHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNYWGPLNLVKRQKGVIARSVLF 217 (390)
Q Consensus 138 NHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (390)
|||.+++. ++... ....|+.+|++|..+. ..+. +...
T Consensus 77 NHE~~~~~-------------------~~~~~------~~~~~~~~gg~~~~~l--~~~~---------~~~~------- 113 (218)
T PRK09968 77 NHEAMALD-------------------AFETG------DGNMWLASGGDWFFDL--NDSE---------QQEA------- 113 (218)
T ss_pred chHHHHHH-------------------HHhcC------ChhHHHHccCHHHhcC--CHHH---------HHHH-------
Confidence 99998643 22211 1235777777664332 1100 0000
Q ss_pred CCCCchhhHhhcCCcEEEeC----CEEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCCCCCcccccCCCCccccc
Q 016381 218 RPGGPMACELARHGVVLKVN----DWVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNPKIPFIATRGYDSVVWNR 293 (390)
Q Consensus 218 ~~~~~~~~~l~~lP~~~~i~----~~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lW~r 293 (390)
.....||+++|.+..+. +++|||||++.. ..+. ..... ....+|.|
T Consensus 114 ---~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p~~----~~~~--------~~~~~---------------~~~~~w~r 163 (218)
T PRK09968 114 ---TDLLLKFHHLPHIIEITNDNIKYVIAHADYPGD----EYDF--------GKEIA---------------ESELLWPV 163 (218)
T ss_pred ---HHHHHHHhcCCeEEEEeeCCCcEEEEeCCCCCc----hhhh--------ccccc---------------hhhceeCc
Confidence 12456899999998763 589999998321 0000 00000 01245653
Q ss_pred ccccCCccchhhhhhhhHHHHHHHH-HHhCCcEEEEccccCCCCceeeeCCeEEEEEecCCCCccCCCceEEEE
Q 016381 294 LYSRDISDLEDYQISQINAVLQDTL-RAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMSSGVLNSRPEVLEI 366 (390)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~~g~~~g~~~~L~i 366 (390)
....... ..+. ...+.+.+|+|||+.+. +. .. ++.+.|||||++| |+++++++
T Consensus 164 ~~~~~~~--------------~~~~~~~~~~~~vv~GHTh~~~-~~-~~-~~~i~IDtGs~~g---G~Lt~~~~ 217 (218)
T PRK09968 164 DRVQKSL--------------NGELQQINGADYFIFGHMMFDN-IQ-TF-ANQIYIDTGSPKS---GRLSFYKI 217 (218)
T ss_pred HHHhhCc--------------cccccccCCCCEEEECCCCcCc-ce-eE-CCEEEEECCCCCC---CceeEEec
Confidence 3111100 0000 12357899999999864 32 22 4589999999886 99999875
No 29
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-28 Score=235.70 Aligned_cols=248 Identities=16% Similarity=0.171 Sum_probs=177.6
Q ss_pred cCCCCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEE
Q 016381 54 SAPGRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVF 133 (390)
Q Consensus 54 ~~~~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~ 133 (390)
..++..+.|+||+||.+|+|.-+|.+.|+++++ ..+||.||+||||.+|+|||..|+.+...+|. .++
T Consensus 161 Ts~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~---------npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~---~~~ 228 (631)
T KOG0377|consen 161 TSVSQQVTICGDLHGKLDDLLVILYKNGLPSSS---------NPYVFNGDFVDRGKRSIEVLMILFALYLVYPN---AVH 228 (631)
T ss_pred cccccceEEeccccccccceEEEEecCCCCCCC---------CCeeecCchhhccccchhhHHHHHHHHhcCch---hhh
Confidence 345668999999999999999999999998753 46999999999999999999999999988876 999
Q ss_pred EEcCCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhcccccCCCchhhhhhhhhhhh
Q 016381 134 QVNGNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNYWGPLNLVKRQKGVIAR 213 (390)
Q Consensus 134 ~lrGNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (390)
+-|||||..+++..++|.. .+.. .+-.+| +.+.
T Consensus 229 LNRGNHED~mmNlRYGF~k------------Ev~~----------KYk~~~-----------------------k~Il-- 261 (631)
T KOG0377|consen 229 LNRGNHEDHMMNLRYGFIK------------EVES----------KYKRHG-----------------------KRIL-- 261 (631)
T ss_pred ccCCchHHHHHHHHHhHHH------------HHHH----------Hhhhcc-----------------------cHHH--
Confidence 9999999998887777422 1111 000000 0000
Q ss_pred hhhcCCCCchhhHhhcCCcEEEeCC-EEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCCC---CCcccccC----
Q 016381 214 SVLFRPGGPMACELARHGVVLKVND-WVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNPK---IPFIATRG---- 285 (390)
Q Consensus 214 ~~~~~~~~~~~~~l~~lP~~~~i~~-~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~---- 285 (390)
.-+.++++.||+.-++++ ++.||||++.. .+++.+.+..+.-+.+.-++..... .+.-...|
T Consensus 262 -------r~leevy~WLPi~tiid~~ilvvHGGiSd~---Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW 331 (631)
T KOG0377|consen 262 -------RFLEEVYRWLPIGTIIDSRILVVHGGISDS---TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEW 331 (631)
T ss_pred -------HHHHHHHHhcchhhhcccceEEEecCcccc---hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHH
Confidence 114567888999888775 55579999863 4555555444433332222211110 00000011
Q ss_pred --CCCcccccccccCC---ccchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecCCCCc-cCC
Q 016381 286 --YDSVVWNRLYSRDI---SDLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMSSGV-LNS 359 (390)
Q Consensus 286 --~~~~lW~r~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~~g~-~~g 359 (390)
.-+++|+||..... .+.++.++.||++++.++|++.+.+.+|+.|++.++|+....++++++|.+...++- ..+
T Consensus 332 ~Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSN 411 (631)
T KOG0377|consen 332 QQIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSN 411 (631)
T ss_pred HHHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCC
Confidence 12578999876542 455677899999999999999999999999999999999888999999998665532 346
Q ss_pred CceEEEEeCCe
Q 016381 360 RPEVLEITDNK 370 (390)
Q Consensus 360 ~~~~L~i~~~~ 370 (390)
+++++.+.+..
T Consensus 412 rGAYikl~~~~ 422 (631)
T KOG0377|consen 412 RGAYIKLGNQL 422 (631)
T ss_pred CceEEEeCCCC
Confidence 78888877653
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.94 E-value=5.6e-26 Score=207.76 Aligned_cols=202 Identities=25% Similarity=0.337 Sum_probs=127.9
Q ss_pred CeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcC
Q 016381 58 RRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNG 137 (390)
Q Consensus 58 ~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrG 137 (390)
+|++|||||||++..|+++++.+++. +..+.+|++||+|||||++.++++++... .+++|+|
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~---------~~~d~~~~~GD~v~~g~~~~~~~~~l~~~---------~~~~v~G 62 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFD---------PARDRLISVGDLIDRGPESLACLELLLEP---------WFHAVRG 62 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCC---------CCCCEEEEeCCcccCCCCHHHHHHHHhcC---------CEEEeEC
Confidence 38999999999999999999987653 12579999999999999999999998652 7899999
Q ss_pred CchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhcccccCCCchhhhhhhhhhhhhhhc
Q 016381 138 NHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNYWGPLNLVKRQKGVIARSVLF 217 (390)
Q Consensus 138 NHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (390)
|||.+++...... . .....|+.+++.|...... . . .
T Consensus 63 Nhe~~~~~~~~~~------------------~-----~~~~~~~~~~~~~~~~~~~--~------------~------~- 98 (207)
T cd07424 63 NHEQMAIDALRAE------------------P-----LDAVRWLANGGEWFLDLPD--E------------E------L- 98 (207)
T ss_pred CChHHHHhHhhCC------------------C-----cchhHHHhcCCeehhhcCh--H------------H------H-
Confidence 9999865421110 0 0123345454433222100 0 0 0
Q ss_pred CCCCchhhHhhcCCcEEEeC----CEEEEecCCCCCccccChhhccHHHHHHHhcCcCCCCCCCCCcccccCCCCccccc
Q 016381 218 RPGGPMACELARHGVVLKVN----DWVFCHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNPKIPFIATRGYDSVVWNR 293 (390)
Q Consensus 218 ~~~~~~~~~l~~lP~~~~i~----~~lfvHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lW~r 293 (390)
...+.+||+++|++..++ ++++||||+.+.. ....+.. ..+... .....+|.+
T Consensus 99 --~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~---~~~~~~~---~~~~~~---------------~~~~~~w~~ 155 (207)
T cd07424 99 --RRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDD---WSDGVGA---VTLRPE---------------DIEELLWSR 155 (207)
T ss_pred --HHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcch---hhhhhhc---cccCcc---------------cceeeeecc
Confidence 022678999999998763 4788999986531 0000000 000000 012467765
Q ss_pred ccccCCccchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecCCCCccCCCceEEEE
Q 016381 294 LYSRDISDLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMSSGVLNSRPEVLEI 366 (390)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~~g~~~g~~~~L~i 366 (390)
+...... +....+.+.||+||||++.... .++.+.||+||+.+ |+++++++
T Consensus 156 ~~~~~~~----------------~~~~~~~~~iV~GHTh~~~~~~---~~~~i~ID~Gsv~g---g~Lt~~~~ 206 (207)
T cd07424 156 TRIQKAQ----------------TQPIKGVDAVVHGHTPVKRPLR---LGNVLYIDTGAVFD---GNLTLLDL 206 (207)
T ss_pred chhhhcC----------------ccccCCCCEEEECCCCCCcceE---ECCEEEEECCCCCC---CeEEEEec
Confidence 4221110 0001245789999999975222 24578999999986 89999986
No 31
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=99.81 E-value=4.3e-20 Score=180.95 Aligned_cols=228 Identities=17% Similarity=0.235 Sum_probs=167.4
Q ss_pred CCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEc
Q 016381 57 GRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVN 136 (390)
Q Consensus 57 ~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lr 136 (390)
..++.++||+||++.++.++++..|.+++ +..++|.||++|||..|.|++..+...+..+|+ +++++|
T Consensus 213 d~~~sv~gd~hGqfydl~nif~l~g~Ps~---------t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn---~~fl~r 280 (476)
T KOG0376|consen 213 DVKISVCGDTHGQFYDLLNIFELNGLPSE---------TNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPN---NFFLLR 280 (476)
T ss_pred CceEEecCCccccccchhhhHhhcCCCCC---------cccccccCceeeecccceeeeeeehhhcccCCc---ceeecc
Confidence 44899999999999999999999988753 557999999999999999999999999999875 999999
Q ss_pred CCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhcccccCCCchhhhhhhhhhhhhhh
Q 016381 137 GNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNYWGPLNLVKRQKGVIARSVL 216 (390)
Q Consensus 137 GNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (390)
||||...++..++|....-+ +|-+. +-.+
T Consensus 281 gn~Es~~m~~iy~f~~e~~~-------kyte~--------------------------------------------~~~~ 309 (476)
T KOG0376|consen 281 GNHESDNMNKIYGFEGEVKA-------KYTEE--------------------------------------------MFNL 309 (476)
T ss_pred CCccchHHHHHhCCCcchhh-------hhHHH--------------------------------------------HHHh
Confidence 99999888777766442210 11110 0001
Q ss_pred cCCCCchhhHhhcCCcEEEeCCEEE-EecCCCCCccccChhhccHHHHHHHhcCcCCCCCCCCCcccccCCCCccccccc
Q 016381 217 FRPGGPMACELARHGVVLKVNDWVF-CHGGLLPHHVAYGLERMNNEVSLWMKGLSECGNNPKIPFIATRGYDSVVWNRLY 295 (390)
Q Consensus 217 ~~~~~~~~~~l~~lP~~~~i~~~lf-vHgGi~p~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lW~r~~ 295 (390)
..+.|..||+.-.+++.++ +|||+... .+..++++....+. ...+.... ....+|++|+
T Consensus 310 ------f~~~f~~LPl~~~i~~~~~~~hgglf~~-~~v~l~d~r~i~r~--------~~~~~~~~-----~~~~lws~pq 369 (476)
T KOG0376|consen 310 ------FSEVFIWLPLAHLINNKVLVMHGGLFSP-DGVTLEDFRNIDRF--------EQPPEEGL-----MCELLWSDPQ 369 (476)
T ss_pred ------hhhhhccccchhhhcCceEEEecCcCCC-CCccHHHHHhhhhc--------cCCccccc-----ccccccCCCc
Confidence 2356788999988887666 69998542 23445554443222 11111111 3578999987
Q ss_pred ccCC--ccchhhhhhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecCCCCc--cCCCceEEEEeC
Q 016381 296 SRDI--SDLEDYQISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMSSGV--LNSRPEVLEITD 368 (390)
Q Consensus 296 ~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~~g~--~~g~~~~L~i~~ 368 (390)
.... ..-++.+..||++++.+|++.++.+.||+||+....|+...++|+++++.+..-+ | .+|..+++.++.
T Consensus 370 ~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g~l~tvfsapny-cd~~~n~ga~i~~~~ 445 (476)
T KOG0376|consen 370 PANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSGKLITVFSAPNY-CDQMGNKGAFIHLEP 445 (476)
T ss_pred cccCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCCcEEEEecCcch-hhhcCCcceEEEecC
Confidence 5443 2223456778999999999999999999999999889999899999999875444 3 346678888874
No 32
>PRK09453 phosphodiesterase; Provisional
Probab=99.52 E-value=3.7e-13 Score=120.50 Aligned_cols=68 Identities=29% Similarity=0.469 Sum_probs=54.4
Q ss_pred CeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCC--------hHHHHHHHHHhHHHHhhcC
Q 016381 58 RRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGED--------ELAILSLLRSLDMQAKAEG 129 (390)
Q Consensus 58 ~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~--------s~evl~~l~~l~~~~~~~g 129 (390)
||+.+|||+||++..++++++.+.-. +.+.+|++||++|+|+. +.++++.+.++ +
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~----------~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~-------~ 63 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQS----------GADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY-------A 63 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhc----------CCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc-------C
Confidence 78999999999999999998875321 24699999999999873 56677776554 2
Q ss_pred CcEEEEcCCchhh
Q 016381 130 GAVFQVNGNHETM 142 (390)
Q Consensus 130 ~~v~~lrGNHE~~ 142 (390)
..+++++||||..
T Consensus 64 ~~v~~V~GNhD~~ 76 (182)
T PRK09453 64 DKIIAVRGNCDSE 76 (182)
T ss_pred CceEEEccCCcch
Confidence 3799999999975
No 33
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.43 E-value=2.2e-12 Score=112.72 Aligned_cols=64 Identities=23% Similarity=0.412 Sum_probs=49.3
Q ss_pred CeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcC
Q 016381 58 RRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNG 137 (390)
Q Consensus 58 ~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrG 137 (390)
||+.+|||+||+...++.+++.+... .+.+.++++||++ +.++++.+.++. ..++.++|
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~---------~~~d~ii~~GD~~-----~~~~~~~l~~~~-------~~~~~V~G 59 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLE---------SNVDLVIHAGDLT-----SPFVLKEFEDLA-------AKVIAVRG 59 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhc---------cCCCEEEEcCCCC-----CHHHHHHHHHhC-------CceEEEcc
Confidence 78999999999998887777665432 1247999999999 456777776542 25999999
Q ss_pred Cchhh
Q 016381 138 NHETM 142 (390)
Q Consensus 138 NHE~~ 142 (390)
|||..
T Consensus 60 N~D~~ 64 (158)
T TIGR00040 60 NNDGE 64 (158)
T ss_pred CCCch
Confidence 99974
No 34
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.30 E-value=7e-11 Score=102.67 Aligned_cols=59 Identities=34% Similarity=0.463 Sum_probs=48.0
Q ss_pred eEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcCC
Q 016381 59 RIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNGN 138 (390)
Q Consensus 59 ~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrGN 138 (390)
|+.+|||+||+...+.++++.+.- .|.+|++||++++++... +. ....+++|+||
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~------------~d~ii~~GD~~~~~~~~~--------~~-----~~~~~~~V~GN 55 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD------------VDLIIHAGDVLYPGPLNE--------LE-----LKAPVIAVRGN 55 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC------------CCEEEECCccccccccch--------hh-----cCCcEEEEeCC
Confidence 589999999999999999998642 358999999999998655 11 12479999999
Q ss_pred chhh
Q 016381 139 HETM 142 (390)
Q Consensus 139 HE~~ 142 (390)
||..
T Consensus 56 hD~~ 59 (155)
T cd00841 56 CDGE 59 (155)
T ss_pred CCCc
Confidence 9975
No 35
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=99.23 E-value=9.3e-11 Score=109.71 Aligned_cols=70 Identities=20% Similarity=0.240 Sum_probs=48.1
Q ss_pred CeEEEEccCCCCH------HHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCC-------CCChHHHHHHHHHhHHH
Q 016381 58 RRIVAVGDLHGDL------DQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDR-------GEDELAILSLLRSLDMQ 124 (390)
Q Consensus 58 ~~i~vIGDiHG~~------~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDR-------G~~s~evl~~l~~l~~~ 124 (390)
|++++|+|+|... ..+.+.|+... ...+.++++||++|. .+...++++.+..+..
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~-----------~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~- 68 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEA-----------RQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD- 68 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhh-----------ccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-
Confidence 7899999999553 23344443210 124799999999985 2334677777777754
Q ss_pred HhhcCCcEEEEcCCchhh
Q 016381 125 AKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 125 ~~~~g~~v~~lrGNHE~~ 142 (390)
.|..|+++.||||..
T Consensus 69 ---~g~~v~~v~GNHD~~ 83 (241)
T PRK05340 69 ---SGVPCYFMHGNRDFL 83 (241)
T ss_pred ---cCCeEEEEeCCCchh
Confidence 345799999999974
No 36
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.18 E-value=4.7e-10 Score=96.93 Aligned_cols=60 Identities=38% Similarity=0.689 Sum_probs=45.9
Q ss_pred CeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcC
Q 016381 58 RRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNG 137 (390)
Q Consensus 58 ~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrG 137 (390)
||+++|||+|++.+.+.++++.+.- .+.+|++||++++ .++++.+... .++.|+|
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~~~------------~d~vi~~GDi~~~----~~~~~~~~~~---------~~~~v~G 55 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYINE------------PDFVIILGDIFDP----EEVLELLRDI---------PVYVVRG 55 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHHTT------------ESEEEEES-SCSH----HHHHHHHHHH---------EEEEE--
T ss_pred CEEEEEeCCCCChhHHHHHHHHhcC------------CCEEEECCCchhH----HHHHHHHhcC---------CEEEEeC
Confidence 7999999999999999999998721 4689999999993 7777777555 6999999
Q ss_pred Cchhh
Q 016381 138 NHETM 142 (390)
Q Consensus 138 NHE~~ 142 (390)
|||..
T Consensus 56 NHD~~ 60 (156)
T PF12850_consen 56 NHDNW 60 (156)
T ss_dssp CCHST
T ss_pred Ccccc
Confidence 99965
No 37
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=99.05 E-value=5.6e-09 Score=93.18 Aligned_cols=59 Identities=17% Similarity=0.269 Sum_probs=42.1
Q ss_pred eEEEEccCC-CCHH-----HHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcE
Q 016381 59 RIVAVGDLH-GDLD-----QARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAV 132 (390)
Q Consensus 59 ~i~vIGDiH-G~~~-----~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v 132 (390)
+|.||||.| |... .+.++++.. +-+.+|++||+++ .++++++..+. ..+
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~-------------~~d~iih~GDi~~-----~~~~~~l~~~~-------~~~ 55 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPG-------------KIQHVLCTGNLCS-----KETYDYLKTIA-------PDV 55 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccC-------------CCCEEEECCCCCC-----HHHHHHHHhhC-------Cce
Confidence 488999999 5433 244444321 2468999999987 77777776652 259
Q ss_pred EEEcCCchhh
Q 016381 133 FQVNGNHETM 142 (390)
Q Consensus 133 ~~lrGNHE~~ 142 (390)
++|+||||..
T Consensus 56 ~~V~GN~D~~ 65 (178)
T cd07394 56 HIVRGDFDEN 65 (178)
T ss_pred EEEECCCCcc
Confidence 9999999964
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.02 E-value=2.6e-09 Score=90.80 Aligned_cols=61 Identities=31% Similarity=0.493 Sum_probs=41.4
Q ss_pred eEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChH--HHHHHHHHhHHHHhhcCCcEEEEc
Q 016381 59 RIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDEL--AILSLLRSLDMQAKAEGGAVFQVN 136 (390)
Q Consensus 59 ~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~--evl~~l~~l~~~~~~~g~~v~~lr 136 (390)
++++|||+||+.. .+ .. ...|.+|++||+++++..+. ++++++.++. ...+++++
T Consensus 1 ~i~~isD~H~~~~----~~---~~----------~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~------~~~~~~v~ 57 (135)
T cd07379 1 RFVCISDTHSRHR----TI---SI----------PDGDVLIHAGDLTERGTLEELQKFLDWLKSLP------HPHKIVIA 57 (135)
T ss_pred CEEEEeCCCCCCC----cC---cC----------CCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC------CCeEEEEE
Confidence 5899999999976 11 11 12579999999999986532 3444444431 11367899
Q ss_pred CCchhh
Q 016381 137 GNHETM 142 (390)
Q Consensus 137 GNHE~~ 142 (390)
||||..
T Consensus 58 GNHD~~ 63 (135)
T cd07379 58 GNHDLT 63 (135)
T ss_pred CCCCCc
Confidence 999964
No 39
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.99 E-value=5.5e-08 Score=89.72 Aligned_cols=72 Identities=19% Similarity=0.323 Sum_probs=57.6
Q ss_pred CCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEc
Q 016381 57 GRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVN 136 (390)
Q Consensus 57 ~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lr 136 (390)
.|++.+|+|+||++..++++++.+.- .+-|.+|++||++++|+...++..++..+... +..+++++
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~----------~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l----~~pv~~V~ 69 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPE----------TGADAIVLIGNLLPKAAKSEDYAAFFRILGEA----HLPTFYVP 69 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhh----------cCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc----CCceEEEc
Confidence 46899999999999999999986521 12469999999999998777777777666432 23699999
Q ss_pred CCchhh
Q 016381 137 GNHETM 142 (390)
Q Consensus 137 GNHE~~ 142 (390)
||||..
T Consensus 70 GNhD~~ 75 (224)
T cd07388 70 GPQDAP 75 (224)
T ss_pred CCCChH
Confidence 999975
No 40
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.94 E-value=1.3e-08 Score=94.26 Aligned_cols=62 Identities=27% Similarity=0.431 Sum_probs=45.6
Q ss_pred eEEEEccCCCCHHHHH-HHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcC
Q 016381 59 RIVAVGDLHGDLDQAR-CALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNG 137 (390)
Q Consensus 59 ~i~vIGDiHG~~~~l~-~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrG 137 (390)
||++||||||+..... ..++.. ..|.++++||+++. +.++++.+..+ +..+++++|
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~-------------~pD~Vl~~GDi~~~---~~~~~~~l~~l-------~~p~~~V~G 58 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLL-------------QPDLVLFVGDFGNE---SVQLVRAISSL-------PLPKAVILG 58 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhcc-------------CCCEEEECCCCCcC---hHHHHHHHHhC-------CCCeEEEcC
Confidence 7999999999987642 233322 13699999999864 56777766655 236899999
Q ss_pred Cchhhh
Q 016381 138 NHETMN 143 (390)
Q Consensus 138 NHE~~~ 143 (390)
|||.+.
T Consensus 59 NHD~~~ 64 (238)
T cd07397 59 NHDAWY 64 (238)
T ss_pred CCcccc
Confidence 999865
No 41
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.90 E-value=8e-08 Score=85.56 Aligned_cols=64 Identities=30% Similarity=0.504 Sum_probs=44.7
Q ss_pred EEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCCh-HHHHHHHHHhHHHHhhcCCcEEEEcCC
Q 016381 60 IVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDE-LAILSLLRSLDMQAKAEGGAVFQVNGN 138 (390)
Q Consensus 60 i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s-~evl~~l~~l~~~~~~~g~~v~~lrGN 138 (390)
|+++||+||++..+.. ..+.- ...|.+|+.||++++|... .+.++.+..+ +..++.++||
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~----------~~~D~vv~~GDl~~~~~~~~~~~~~~l~~~-------~~p~~~v~GN 61 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKA----------EEADAVIVAGDITNFGGKEAAVEINLLLAI-------GVPVLAVPGN 61 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhc----------cCCCEEEECCCccCcCCHHHHHHHHHHHhc-------CCCEEEEcCC
Confidence 5789999999998876 22211 1247999999999998763 3333333222 3479999999
Q ss_pred chhh
Q 016381 139 HETM 142 (390)
Q Consensus 139 HE~~ 142 (390)
||..
T Consensus 62 HD~~ 65 (188)
T cd07392 62 CDTP 65 (188)
T ss_pred CCCH
Confidence 9975
No 42
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.75 E-value=4.4e-08 Score=91.06 Aligned_cols=71 Identities=18% Similarity=0.289 Sum_probs=43.3
Q ss_pred EEEEccCCCCH---HHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCC-----CC--hHHHHHHHHHhHHHHhhcC
Q 016381 60 IVAVGDLHGDL---DQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRG-----ED--ELAILSLLRSLDMQAKAEG 129 (390)
Q Consensus 60 i~vIGDiHG~~---~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG-----~~--s~evl~~l~~l~~~~~~~g 129 (390)
+++|+|+|... +....+++.+.-.. ...+.+|++||++|.. +. ..++.+.+..+.. .+
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~--------~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~----~~ 68 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEA--------RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD----QG 68 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhh--------ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH----CC
Confidence 37899999653 12233333321110 1246999999999952 11 2345555655543 34
Q ss_pred CcEEEEcCCchhh
Q 016381 130 GAVFQVNGNHETM 142 (390)
Q Consensus 130 ~~v~~lrGNHE~~ 142 (390)
..|+++.||||..
T Consensus 69 ~~v~~v~GNHD~~ 81 (231)
T TIGR01854 69 VPCYFMHGNRDFL 81 (231)
T ss_pred CeEEEEcCCCchh
Confidence 5899999999975
No 43
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.73 E-value=4.6e-07 Score=80.07 Aligned_cols=59 Identities=22% Similarity=0.326 Sum_probs=40.2
Q ss_pred HHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecCCCCccCCCc-eEEEEeCC--eEEEEecCC
Q 016381 317 TLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMSSGVLNSRP-EVLEITDN--KARVISGKR 378 (390)
Q Consensus 317 ~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~~g~~~g~~-~~L~i~~~--~~~~~~~~~ 378 (390)
.-+..+++.+|+|||+.+. +. .. +.++.|.-|...++.++.+ +++.++.+ ++++..-..
T Consensus 104 la~~~~~Dvli~GHTH~p~-~~-~~-~~i~~vNPGS~s~pr~~~~~sy~il~~~~~~~~~~~~~~ 165 (172)
T COG0622 104 LAKELGADVLIFGHTHKPV-AE-KV-GGILLVNPGSVSGPRGGNPASYAILDVDNLEVEVLFLER 165 (172)
T ss_pred HHHhcCCCEEEECCCCccc-EE-EE-CCEEEEcCCCcCCCCCCCCcEEEEEEcCCCEEEEEEeec
Confidence 3345579999999999975 33 22 4588899999988877765 55555544 555555443
No 44
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=98.73 E-value=2.8e-08 Score=85.07 Aligned_cols=74 Identities=27% Similarity=0.352 Sum_probs=52.7
Q ss_pred CeEEEEccCCCCHHHH----HHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHH--HHhHHHHhhcCCc
Q 016381 58 RRIVAVGDLHGDLDQA----RCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLL--RSLDMQAKAEGGA 131 (390)
Q Consensus 58 ~~i~vIGDiHG~~~~l----~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l--~~l~~~~~~~g~~ 131 (390)
|||++|||+|+..... ..+.+...- ...+.+|++||+++++..+.+..... ...... .+..
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~----------~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 67 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAE----------NKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLN---PKIP 67 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHH----------TTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHH---TTTT
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhcc----------CCCCEEEeeccccccccccccchhhhccchhhhh---cccc
Confidence 5899999999999987 333332211 23579999999999999887777654 222222 3568
Q ss_pred EEEEcCCchhhhc
Q 016381 132 VFQVNGNHETMNV 144 (390)
Q Consensus 132 v~~lrGNHE~~~l 144 (390)
+++++||||....
T Consensus 68 ~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 68 VYFILGNHDYYSG 80 (200)
T ss_dssp EEEEE-TTSSHHH
T ss_pred cccccccccccee
Confidence 9999999998753
No 45
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.72 E-value=2.3e-06 Score=77.58 Aligned_cols=211 Identities=19% Similarity=0.257 Sum_probs=125.0
Q ss_pred CCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCcc--CCCCChHHHHHH-HHHhHHHHhhcCCcEE
Q 016381 57 GRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVL--DRGEDELAILSL-LRSLDMQAKAEGGAVF 133 (390)
Q Consensus 57 ~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~v--DRG~~s~evl~~-l~~l~~~~~~~g~~v~ 133 (390)
.|++.++.|+||..+.+.+++..+.-.. .|.+|+.||+. +.|+.-...-.. +..++. .+..|+
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~----------~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~----~~~~v~ 68 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIR----------ADLLVIAGDLTYFHFGPKEVAEELNKLEALKE----LGIPVL 68 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhcc----------CCEEEEecceehhhcCchHHHHhhhHHHHHHh----cCCeEE
Confidence 5799999999999999999998765322 46899999999 888754433321 334433 345899
Q ss_pred EEcCCchhhhccccccccCCCCchhhHHHHHHhhhccchHHHHHhhhhcchhhhHHhhhcccccCCCchhhhhhhhhhhh
Q 016381 134 QVNGNHETMNVEGDFRYVDSGGFDECSDFLEYLNDYENDWEEAFVGWVGMSERWKEDRRLSRNYWGPLNLVKRQKGVIAR 213 (390)
Q Consensus 134 ~lrGNHE~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (390)
.++||-|...+ .+.+...+
T Consensus 69 avpGNcD~~~v------------------~~~l~~~~------------------------------------------- 87 (226)
T COG2129 69 AVPGNCDPPEV------------------IDVLKNAG------------------------------------------- 87 (226)
T ss_pred EEcCCCChHHH------------------HHHHHhcc-------------------------------------------
Confidence 99999887532 11221110
Q ss_pred hhhcCCCCchhhHhhcCCcEEEeCCEEEE-ecCCCCCccccCh----hhccHHHHHHHhcCcCCCCCCCCCcccccCCCC
Q 016381 214 SVLFRPGGPMACELARHGVVLKVNDWVFC-HGGLLPHHVAYGL----ERMNNEVSLWMKGLSECGNNPKIPFIATRGYDS 288 (390)
Q Consensus 214 ~~~~~~~~~~~~~l~~lP~~~~i~~~lfv-HgGi~p~~~~~~l----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 288 (390)
..-.+-+..++.+.|| =||..|.-..... +++.......+....... . .+.. +..
T Consensus 88 -------------~~v~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~~---~--Il~~--HaP 147 (226)
T COG2129 88 -------------VNVHGRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNPV---N--ILLT--HAP 147 (226)
T ss_pred -------------cccccceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCcc---e--EEEe--cCC
Confidence 0001135677888888 5887764221111 122222222222221100 0 1100 011
Q ss_pred cccccccccCCccchhhh-hhhhHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecCCCCccCCCceEEEEe
Q 016381 289 VVWNRLYSRDISDLEDYQ-ISQINAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMSSGVLNSRPEVLEIT 367 (390)
Q Consensus 289 ~lW~r~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~~g~~~g~~~~L~i~ 367 (390)
| +....++ ..+ ..-|++++.++++..+-...|+||-+...|+..- |+.+.|.-|.... ++-+++++.
T Consensus 148 P-----~gt~~d~--~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~i--G~TivVNPG~~~~---g~yA~i~l~ 215 (226)
T COG2129 148 P-----YGTLLDT--PSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKI--GNTIVVNPGPLGE---GRYALIELE 215 (226)
T ss_pred C-----CCccccC--CCCccccchHHHHHHHHHhCCceEEEeeeccccccccc--CCeEEECCCCccC---ceEEEEEec
Confidence 1 1100000 111 2237899999999999999999999987787543 5677777777443 778999999
Q ss_pred CCeEEEE
Q 016381 368 DNKARVI 374 (390)
Q Consensus 368 ~~~~~~~ 374 (390)
+..+++.
T Consensus 216 ~~~Vk~~ 222 (226)
T COG2129 216 KEVVKLE 222 (226)
T ss_pred CcEEEEE
Confidence 8866554
No 46
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.60 E-value=1.2e-06 Score=80.04 Aligned_cols=60 Identities=28% Similarity=0.291 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecCCCCccCCCceEEEEeCCeEEEEec
Q 016381 310 INAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMSSGVLNSRPEVLEITDNKARVISG 376 (390)
Q Consensus 310 ~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~~g~~~g~~~~L~i~~~~~~~~~~ 376 (390)
.++.+.+.++..+++.||+|||+.+..-+. ++ ...|..|. +....++++++++....++-
T Consensus 175 ~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i--~~-~~yi~lGd----W~~~~s~~~v~~~~~~~~~~ 234 (237)
T COG2908 175 NPAAVADEARRHGVDGVIHGHTHRPAIHNI--PG-ITYINLGD----WVSEGSILEVDDGGLELIQL 234 (237)
T ss_pred hHHHHHHHHHHcCCCEEEecCcccHhhccC--CC-ceEEecCc----chhcceEEEEecCcEEEeec
Confidence 456667777889999999999999763221 22 33444442 23578999999998766653
No 47
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.55 E-value=5.4e-06 Score=78.35 Aligned_cols=75 Identities=16% Similarity=0.135 Sum_probs=46.0
Q ss_pred eEEEEccCCCCH----------------HHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChH---HHHHHHH
Q 016381 59 RIVAVGDLHGDL----------------DQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDEL---AILSLLR 119 (390)
Q Consensus 59 ~i~vIGDiHG~~----------------~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~---evl~~l~ 119 (390)
+++++||+|-.. ..|+++++.+.-. .+..+.+|++||+++.|.... +..+.+.
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~--------~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~ 77 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKL--------NPKPKFVVVCGDLVNAMPGDELRERQVSDLK 77 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhc--------CCCCCEEEEeCCcCCCCcchhhHHHHHHHHH
Confidence 788999999774 1345555554321 123568999999999987642 1122222
Q ss_pred HhHHHHhhcCCcEEEEcCCchhh
Q 016381 120 SLDMQAKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 120 ~l~~~~~~~g~~v~~lrGNHE~~ 142 (390)
+...... .+-.++.++||||..
T Consensus 78 ~~~~~~~-~~vp~~~i~GNHD~~ 99 (262)
T cd07395 78 DVLSLLD-PDIPLVCVCGNHDVG 99 (262)
T ss_pred HHHhhcc-CCCcEEEeCCCCCCC
Confidence 2222111 134799999999974
No 48
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.51 E-value=1.9e-06 Score=80.02 Aligned_cols=69 Identities=25% Similarity=0.363 Sum_probs=45.9
Q ss_pred eEEEEccCCCC------------HHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCCh--HHHHHHHHHhHHH
Q 016381 59 RIVAVGDLHGD------------LDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDE--LAILSLLRSLDMQ 124 (390)
Q Consensus 59 ~i~vIGDiHG~------------~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s--~evl~~l~~l~~~ 124 (390)
|+++|+|+|-. ...+.++++.+.-.. +..+.+|++||+++.|... ..+++.+..+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~--------~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~--- 69 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALH--------PRPDLVLVTGDLTDDGSPESYERLRELLAAL--- 69 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcC--------CCCCEEEECccCCCCCCHHHHHHHHHHHhhc---
Confidence 58999999955 345677777653220 1356999999999987532 2233333332
Q ss_pred HhhcCCcEEEEcCCchhh
Q 016381 125 AKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 125 ~~~~g~~v~~lrGNHE~~ 142 (390)
+..++.++||||..
T Consensus 70 ----~~p~~~v~GNHD~~ 83 (240)
T cd07402 70 ----PIPVYLLPGNHDDR 83 (240)
T ss_pred ----CCCEEEeCCCCCCH
Confidence 34799999999974
No 49
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=98.47 E-value=8.8e-06 Score=83.48 Aligned_cols=74 Identities=16% Similarity=0.237 Sum_probs=51.3
Q ss_pred hhhhhHHHHHHHHHHhCCc----EEEEccccCCC--Cce-eeeCCeEEEEEecCCCCccCC--CceE-EEEeCCeEEEEe
Q 016381 306 QISQINAVLQDTLRAVGAK----AMVVGHTPQFA--GAN-CEYNCSIWRIDVGMSSGVLNS--RPEV-LEITDNKARVIS 375 (390)
Q Consensus 306 ~~~~~~~~~~~~l~~~~~~----~iV~GHt~~~~--G~~-~~~~~~~i~IDtG~~~g~~~g--~~~~-L~i~~~~~~~~~ 375 (390)
.....++...+.|+.+|.+ .||.||||+.. |=. .+++|+++.||.|.|..+... -.++ |..+..++++.+
T Consensus 503 ~l~~~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskAYqk~TGIAGYTLiyNS~gl~L~~ 582 (640)
T PF06874_consen 503 KLREDEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKAYQKTTGIAGYTLIYNSYGLQLVA 582 (640)
T ss_pred hhccCHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhhhccccCccceEEEecCCcceecc
Confidence 3444567788889999887 99999999974 532 357899999999999876432 2222 223334677766
Q ss_pred cCCC
Q 016381 376 GKRD 379 (390)
Q Consensus 376 ~~~~ 379 (390)
..+.
T Consensus 583 H~pF 586 (640)
T PF06874_consen 583 HQPF 586 (640)
T ss_pred CCCC
Confidence 6653
No 50
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.46 E-value=2.9e-06 Score=71.63 Aligned_cols=56 Identities=20% Similarity=0.275 Sum_probs=39.9
Q ss_pred EEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcCCch
Q 016381 61 VAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNGNHE 140 (390)
Q Consensus 61 ~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrGNHE 140 (390)
.||||.||..+.+.++.... .+.|.+|++||+. .++++.+..+ .+..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~~------------~~~d~ii~~GD~~------~~~~~~~~~~------~~~~~~~V~GN~D 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVRL------------EGVDLILSAGDLP------KEYLEYLVTM------LNVPVYYVHGNHD 56 (129)
T ss_pred CeeccccCccccchHHHhhC------------CCCCEEEECCCCC------hHHHHHHHHH------cCCCEEEEeCCCc
Confidence 37999999988777766642 1246999999973 3445555544 1236899999999
No 51
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.46 E-value=6.8e-07 Score=81.75 Aligned_cols=40 Identities=20% Similarity=0.304 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecC
Q 016381 310 INAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGM 352 (390)
Q Consensus 310 ~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~ 352 (390)
..+.+.+.++..+++.+|+|||+++. ... .+ +...+.+|+
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~-~~~-~~-~~~~~n~G~ 216 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPA-LHE-LD-GKLYINLGD 216 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCC-eEE-EC-CEEEEECCC
Confidence 34556666778899999999999975 222 22 456677765
No 52
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.38 E-value=8.3e-06 Score=73.87 Aligned_cols=70 Identities=16% Similarity=0.150 Sum_probs=43.1
Q ss_pred CeEEEEccCCCCHH------------HHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCCh---HHHHHHHHHhH
Q 016381 58 RRIVAVGDLHGDLD------------QARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDE---LAILSLLRSLD 122 (390)
Q Consensus 58 ~~i~vIGDiHG~~~------------~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s---~evl~~l~~l~ 122 (390)
.++++|+|+|-... .+..+.+.+.- ...+.+|++||+++.+... .+.+..+....
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l 72 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDA----------EKPDLVVLTGDLITGENTNDNSTSALDKAVSPM 72 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhh----------cCCCEEEECCccccCCCCchHHHHHHHHHHHHH
Confidence 58999999997432 12222222211 1246899999999976653 44444443332
Q ss_pred HHHhhcCCcEEEEcCCch
Q 016381 123 MQAKAEGGAVFQVNGNHE 140 (390)
Q Consensus 123 ~~~~~~g~~v~~lrGNHE 140 (390)
.+ .+-.++++.||||
T Consensus 73 ~~---~~~p~~~~~GNHD 87 (199)
T cd07383 73 ID---RKIPWAATFGNHD 87 (199)
T ss_pred HH---cCCCEEEECccCC
Confidence 22 2457899999999
No 53
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.36 E-value=9.8e-06 Score=77.27 Aligned_cols=74 Identities=15% Similarity=0.137 Sum_probs=48.0
Q ss_pred CCCeEEEEccCCC------------CHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHH
Q 016381 56 PGRRIVAVGDLHG------------DLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDM 123 (390)
Q Consensus 56 ~~~~i~vIGDiHG------------~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~ 123 (390)
..++++.|+|+|= ..+.|.++++.+.-.. ...|.+|+.||+++.|. .+-+..+++.-.
T Consensus 13 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~--------~~~D~vvitGDl~~~~~--~~~~~~~~~~l~ 82 (275)
T PRK11148 13 ARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQ--------HEFDLIVATGDLAQDHS--SEAYQHFAEGIA 82 (275)
T ss_pred CCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhC--------CCCCEEEECCCCCCCCC--HHHHHHHHHHHh
Confidence 4579999999992 1356777787653221 12468999999999874 222222222222
Q ss_pred HHhhcCCcEEEEcCCchhh
Q 016381 124 QAKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 124 ~~~~~g~~v~~lrGNHE~~ 142 (390)
+ .+..+++++||||..
T Consensus 83 ~---l~~Pv~~v~GNHD~~ 98 (275)
T PRK11148 83 P---LRKPCVWLPGNHDFQ 98 (275)
T ss_pred h---cCCcEEEeCCCCCCh
Confidence 2 234799999999974
No 54
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.33 E-value=1.4e-05 Score=68.25 Aligned_cols=43 Identities=28% Similarity=0.403 Sum_probs=29.2
Q ss_pred ccEEEEeCCccCCCCCh--HHHHHHHHHhHHHHhhcCCcEEEEcCCchh
Q 016381 95 ESVLIQLGDVLDRGEDE--LAILSLLRSLDMQAKAEGGAVFQVNGNHET 141 (390)
Q Consensus 95 ~~~lvfLGD~vDRG~~s--~evl~~l~~l~~~~~~~g~~v~~lrGNHE~ 141 (390)
.+.++++||+++.|... .+..+++..+... ...++.++||||.
T Consensus 36 ~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~----~~~~~~v~GNHD~ 80 (144)
T cd07400 36 PDLVVITGDLTQRGLPEEFEEAREFLDALPAP----LEPVLVVPGNHDV 80 (144)
T ss_pred CCEEEECCCCCCCCCHHHHHHHHHHHHHcccc----CCcEEEeCCCCeE
Confidence 57999999999988742 2333444444321 1279999999994
No 55
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.24 E-value=0.00011 Score=67.40 Aligned_cols=70 Identities=20% Similarity=0.304 Sum_probs=43.0
Q ss_pred eEEEEccCCCCH----HHHHH----HHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChH---HHHHHHHHhHHHHhh
Q 016381 59 RIVAVGDLHGDL----DQARC----ALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDEL---AILSLLRSLDMQAKA 127 (390)
Q Consensus 59 ~i~vIGDiHG~~----~~l~~----lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~---evl~~l~~l~~~~~~ 127 (390)
+++++||+|-.. ..+.+ +++.+.- ...+.+|++||+++.+.... ...+.+..+. +
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~----------~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~----~ 67 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEA----------LNIAFVLHLGDIVDDGDNDAEWEAADKAFARLD----K 67 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHH----------cCCCEEEECCCccCCCCCHHHHHHHHHHHHHHH----H
Confidence 689999999532 33333 3333211 12468999999999988432 2333333332 1
Q ss_pred cCCcEEEEcCCchhh
Q 016381 128 EGGAVFQVNGNHETM 142 (390)
Q Consensus 128 ~g~~v~~lrGNHE~~ 142 (390)
.+-.+++++||||..
T Consensus 68 ~~~p~~~~~GNHD~~ 82 (214)
T cd07399 68 AGIPYSVLAGNHDLV 82 (214)
T ss_pred cCCcEEEECCCCcch
Confidence 234689999999953
No 56
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.21 E-value=4e-06 Score=79.85 Aligned_cols=72 Identities=21% Similarity=0.192 Sum_probs=52.1
Q ss_pred CCCeEEEEccCCCC----HHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCC--CChHHHHHHHHHhHHHHhhcC
Q 016381 56 PGRRIVAVGDLHGD----LDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRG--EDELAILSLLRSLDMQAKAEG 129 (390)
Q Consensus 56 ~~~~i~vIGDiHG~----~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG--~~s~evl~~l~~l~~~~~~~g 129 (390)
.++|+++++|+|.. ...+.++++++.-. ..|.++++||++|++ .+..++.+.+..++..
T Consensus 48 ~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~----------~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~----- 112 (271)
T PRK11340 48 APFKILFLADLHYSRFVPLSLISDAIALGIEQ----------KPDLILLGGDYVLFDMPLNFSAFSDVLSPLAEC----- 112 (271)
T ss_pred CCcEEEEEcccCCCCcCCHHHHHHHHHHHHhc----------CCCEEEEccCcCCCCccccHHHHHHHHHHHhhc-----
Confidence 35899999999987 55677777764321 246999999999953 3344566667776542
Q ss_pred CcEEEEcCCchhh
Q 016381 130 GAVFQVNGNHETM 142 (390)
Q Consensus 130 ~~v~~lrGNHE~~ 142 (390)
..++.+.||||..
T Consensus 113 ~pv~~V~GNHD~~ 125 (271)
T PRK11340 113 APTFACFGNHDRP 125 (271)
T ss_pred CCEEEecCCCCcc
Confidence 3699999999964
No 57
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.14 E-value=3.1e-06 Score=77.74 Aligned_cols=71 Identities=31% Similarity=0.429 Sum_probs=51.8
Q ss_pred CCeEEEEccCCCCHH----HHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChH-HHHHHHHHhHHHHhhcCCc
Q 016381 57 GRRIVAVGDLHGDLD----QARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDEL-AILSLLRSLDMQAKAEGGA 131 (390)
Q Consensus 57 ~~~i~vIGDiHG~~~----~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~-evl~~l~~l~~~~~~~g~~ 131 (390)
++++++++|+|+... .+.++++.+.-. ..+.++++||++|.+.... .+.+++..+. .+..
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~----------~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~-----~~~~ 65 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINAL----------KPDLVVLTGDLVDGSVDVLELLLELLKKLK-----APLG 65 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhcc----------CCCEEEEcCcccCCcchhhHHHHHHHhccC-----CCCC
Confidence 368999999998754 667777665321 2468999999999987764 5555555543 2347
Q ss_pred EEEEcCCchhh
Q 016381 132 VFQVNGNHETM 142 (390)
Q Consensus 132 v~~lrGNHE~~ 142 (390)
++++.||||..
T Consensus 66 v~~v~GNHD~~ 76 (223)
T cd07385 66 VYAVLGNHDYY 76 (223)
T ss_pred EEEECCCcccc
Confidence 99999999975
No 58
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.08 E-value=9.3e-05 Score=76.53 Aligned_cols=81 Identities=21% Similarity=0.263 Sum_probs=46.1
Q ss_pred CCCeEEEEccCC-CCH----HHHHHHHHHcC-CCCCCCCCCcCCCccEEEEeCCccCC-CCCh---------------HH
Q 016381 56 PGRRIVAVGDLH-GDL----DQARCALEMAG-VLSSDGLDLWTGGESVLIQLGDVLDR-GEDE---------------LA 113 (390)
Q Consensus 56 ~~~~i~vIGDiH-G~~----~~l~~lL~~~g-~~~~d~~~~w~~~~~~lvfLGD~vDR-G~~s---------------~e 113 (390)
...++++|+|+| |.. ..+..+++.+. ... + +..-....+.+|++||++|. |+.. .+
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~-~-~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~ 319 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVG-N-EEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEA 319 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCc-c-chhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHH
Confidence 345899999999 542 23444444432 111 0 00001234799999999994 3211 13
Q ss_pred HHHHHHHhHHHHhhcCCcEEEEcCCchhhh
Q 016381 114 ILSLLRSLDMQAKAEGGAVFQVNGNHETMN 143 (390)
Q Consensus 114 vl~~l~~l~~~~~~~g~~v~~lrGNHE~~~ 143 (390)
+.+++..+. .+-.|++++||||...
T Consensus 320 l~~~L~~L~-----~~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 320 AAEYLKQIP-----EDIKIIISPGNHDAVR 344 (504)
T ss_pred HHHHHHhhh-----cCCeEEEecCCCcchh
Confidence 444444442 1347999999999753
No 59
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.01 E-value=2.1e-05 Score=74.17 Aligned_cols=75 Identities=21% Similarity=0.252 Sum_probs=47.2
Q ss_pred CeEEEEccCCCCH------------HHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHH
Q 016381 58 RRIVAVGDLHGDL------------DQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQA 125 (390)
Q Consensus 58 ~~i~vIGDiHG~~------------~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~ 125 (390)
||++.++|+|-.. ..|..+++.+.- ...|.+|+.||++|+..-+.+....+.....+.
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~----------~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l 70 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKA----------EQIDALLVAGDVFDTANPPAEAQELFNAFFRNL 70 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHH----------cCCCEEEECCccCCCCCCCHHHHHHHHHHHHHH
Confidence 7899999999432 234444443311 124789999999998765554443333332222
Q ss_pred hhcC-CcEEEEcCCchhh
Q 016381 126 KAEG-GAVFQVNGNHETM 142 (390)
Q Consensus 126 ~~~g-~~v~~lrGNHE~~ 142 (390)
.+.+ -.|+++.||||..
T Consensus 71 ~~~~~i~v~~i~GNHD~~ 88 (253)
T TIGR00619 71 SDANPIPIVVISGNHDSA 88 (253)
T ss_pred HhcCCceEEEEccCCCCh
Confidence 2233 4799999999975
No 60
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.00 E-value=0.00022 Score=67.29 Aligned_cols=23 Identities=26% Similarity=0.520 Sum_probs=20.4
Q ss_pred HHHHHHHhCCcEEEEccccCCCC
Q 016381 314 LQDTLRAVGAKAMVVGHTPQFAG 336 (390)
Q Consensus 314 ~~~~l~~~~~~~iV~GHt~~~~G 336 (390)
+.+.+++.+++.+++||++....
T Consensus 190 ~~~ll~~~~v~~vl~GH~H~~~~ 212 (256)
T cd07401 190 FKDLLKKYNVTAYLCGHLHPLGG 212 (256)
T ss_pred HHHHHHhcCCcEEEeCCccCCCc
Confidence 77788888999999999999776
No 61
>PHA02546 47 endonuclease subunit; Provisional
Probab=98.00 E-value=1.8e-05 Score=77.85 Aligned_cols=75 Identities=27% Similarity=0.364 Sum_probs=50.0
Q ss_pred CeEEEEccCCCC------------HHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCC-CChHHHHHHHHH-hHH
Q 016381 58 RRIVAVGDLHGD------------LDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRG-EDELAILSLLRS-LDM 123 (390)
Q Consensus 58 ~~i~vIGDiHG~------------~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG-~~s~evl~~l~~-l~~ 123 (390)
||++.++|+|=. ...|.++++.+.- ...|.+|+.||++|+. +.+.+++.++.. +..
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~----------~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~ 70 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKA----------HGITTWIQLGDTFDVRKAITQNTMNFVREKIFD 70 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHH----------cCCCEEEECCcccCCCCCCCHHHHHHHHHHHHH
Confidence 789999999932 2334444443311 1247999999999985 455666666655 333
Q ss_pred HHhhcCCcEEEEcCCchhh
Q 016381 124 QAKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 124 ~~~~~g~~v~~lrGNHE~~ 142 (390)
...+.|-.|++|.||||..
T Consensus 71 ~L~~~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 71 LLKEAGITLHVLVGNHDMY 89 (340)
T ss_pred HHHHCCCeEEEEccCCCcc
Confidence 3334466899999999974
No 62
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=97.99 E-value=1.6e-05 Score=74.17 Aligned_cols=68 Identities=25% Similarity=0.281 Sum_probs=48.1
Q ss_pred eEEEEccCCCCH------HHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcE
Q 016381 59 RIVAVGDLHGDL------DQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAV 132 (390)
Q Consensus 59 ~i~vIGDiHG~~------~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v 132 (390)
|+.+|+|+|+++ ..+.++++.+.-. +.|.+|+.||++++.+.+.++++.+.++ .+..|
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~----------~~d~vv~~GDl~~~~~~~~~~~~~l~~~------~~~pv 64 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQ----------KIDHLHIAGDISNDFQRSLPFIEKLQEL------KGIKV 64 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhc----------CCCEEEECCccccchhhHHHHHHHHHHh------cCCcE
Confidence 589999999763 2355666654311 2469999999999876666666655543 23479
Q ss_pred EEEcCCchhh
Q 016381 133 FQVNGNHETM 142 (390)
Q Consensus 133 ~~lrGNHE~~ 142 (390)
+++.||||..
T Consensus 65 ~~v~GNHD~~ 74 (239)
T TIGR03729 65 TFNAGNHDML 74 (239)
T ss_pred EEECCCCCCC
Confidence 9999999964
No 63
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=97.98 E-value=1.8e-05 Score=65.06 Aligned_cols=69 Identities=28% Similarity=0.423 Sum_probs=47.1
Q ss_pred EEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcCCch
Q 016381 61 VAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNGNHE 140 (390)
Q Consensus 61 ~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrGNHE 140 (390)
+++||+|+............... ....+.+|++||+++.+....+..... .......+..++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~--------~~~~~~vi~~GD~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAA--------AEKPDFVLVLGDLVGDGPDPEEVLAAA---LALLLLLGIPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhc--------ccCCCEEEECCcccCCCCCchHHHHHH---HHHhhcCCCCEEEeCCCce
Confidence 47999999999888765211001 123579999999999988776654432 1111224568999999999
No 64
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=97.96 E-value=7.5e-06 Score=71.85 Aligned_cols=68 Identities=25% Similarity=0.226 Sum_probs=45.4
Q ss_pred EEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcCCc
Q 016381 60 IVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNGNH 139 (390)
Q Consensus 60 i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrGNH 139 (390)
+.++||+|++.......+.. ... ..+.|.++++||++++++....+. ++... ..+..+++++|||
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~--~~~-------~~~~d~li~~GDi~~~~~~~~~~~-~~~~~-----~~~~~v~~v~GNH 65 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLN--FPI-------APDADILVLAGDIGYLTDAPRFAP-LLLAL-----KGFEPVIYVPGNH 65 (166)
T ss_pred CceEccccccCccccccccc--cCC-------CCCCCEEEECCCCCCCcchHHHHH-HHHhh-----cCCccEEEeCCCc
Confidence 46899999998776665431 111 123579999999999887655443 22111 1234799999999
Q ss_pred hhh
Q 016381 140 ETM 142 (390)
Q Consensus 140 E~~ 142 (390)
|..
T Consensus 66 D~~ 68 (166)
T cd07404 66 EFY 68 (166)
T ss_pred ceE
Confidence 975
No 65
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.88 E-value=5.1e-05 Score=72.06 Aligned_cols=72 Identities=26% Similarity=0.370 Sum_probs=48.8
Q ss_pred eEEEEccCC-CC------------HHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCC-hHHHHHHHHHhHHH
Q 016381 59 RIVAVGDLH-GD------------LDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGED-ELAILSLLRSLDMQ 124 (390)
Q Consensus 59 ~i~vIGDiH-G~------------~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~-s~evl~~l~~l~~~ 124 (390)
|+.+|+|+| +. ...+.++++.+.-. ..+.+|++||+++.|.. +.+-++.++..-..
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~----------~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~ 71 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRE----------SLDFVVQLGDIIDGDNARAEEALDAVLAILDR 71 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcC----------CCCEEEECCCeecCCCchHHHHHHHHHHHHHh
Confidence 789999999 22 35667777776422 14689999999998863 33344444333222
Q ss_pred HhhcCCcEEEEcCCchhhh
Q 016381 125 AKAEGGAVFQVNGNHETMN 143 (390)
Q Consensus 125 ~~~~g~~v~~lrGNHE~~~ 143 (390)
.+..++.++||||...
T Consensus 72 ---l~~p~~~v~GNHD~~~ 87 (267)
T cd07396 72 ---LKGPVHHVLGNHDLYN 87 (267)
T ss_pred ---cCCCEEEecCcccccc
Confidence 3458999999999764
No 66
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.86 E-value=6.3e-05 Score=75.71 Aligned_cols=75 Identities=21% Similarity=0.303 Sum_probs=45.2
Q ss_pred CeEEEEccCCCCH--------HH----HHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHH
Q 016381 58 RRIVAVGDLHGDL--------DQ----ARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQA 125 (390)
Q Consensus 58 ~~i~vIGDiHG~~--------~~----l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~ 125 (390)
||++.++|+|-.. .+ +..+++.+.- ...|.+|+.||++|++..+......+..+....
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~----------~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L 70 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQE----------HQVDAIIVAGDIFDTGSPPSYARELYNRFVVNL 70 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHh----------cCCCEEEECCccccCCCCcHHHHHHHHHHHHHH
Confidence 7899999999531 11 2233333211 125799999999999865543333222221222
Q ss_pred hhcCCcEEEEcCCchhh
Q 016381 126 KAEGGAVFQVNGNHETM 142 (390)
Q Consensus 126 ~~~g~~v~~lrGNHE~~ 142 (390)
.+.+-.|++|.||||..
T Consensus 71 ~~~~~~v~~I~GNHD~~ 87 (407)
T PRK10966 71 QQTGCQLVVLAGNHDSV 87 (407)
T ss_pred HhcCCcEEEEcCCCCCh
Confidence 22345799999999975
No 67
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.85 E-value=0.00024 Score=68.13 Aligned_cols=69 Identities=14% Similarity=0.162 Sum_probs=41.7
Q ss_pred CeEEEEccCCC----CHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCCh-----HHHHHHHHHhHHHHhhc
Q 016381 58 RRIVAVGDLHG----DLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDE-----LAILSLLRSLDMQAKAE 128 (390)
Q Consensus 58 ~~i~vIGDiHG----~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s-----~evl~~l~~l~~~~~~~ 128 (390)
-+++|+||.|. ....+.++.+. . ...+.+|++||+++-+... ...++.+..+..
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~-~-----------~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~----- 67 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE-L-----------GNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLAS----- 67 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc-c-----------CCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHh-----
Confidence 48999999995 33344444432 0 1246899999999644322 222233322221
Q ss_pred CCcEEEEcCCchhhh
Q 016381 129 GGAVFQVNGNHETMN 143 (390)
Q Consensus 129 g~~v~~lrGNHE~~~ 143 (390)
.-.++.++||||...
T Consensus 68 ~~P~~~~~GNHD~~~ 82 (294)
T cd00839 68 YVPYMVTPGNHEADY 82 (294)
T ss_pred cCCcEEcCccccccc
Confidence 236899999999753
No 68
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.80 E-value=3.5e-05 Score=67.97 Aligned_cols=68 Identities=24% Similarity=0.284 Sum_probs=45.3
Q ss_pred EEEEccCCCCHHHH---------------HHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHH
Q 016381 60 IVAVGDLHGDLDQA---------------RCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQ 124 (390)
Q Consensus 60 i~vIGDiHG~~~~l---------------~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~ 124 (390)
+|+|+|+|-..... .++++.+.- +....+.+|++||+++++..+.. ++.+.++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~--------~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~--- 68 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNE--------TVGPDDTVYHLGDFSFGGKAGTE-LELLSRL--- 68 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhh--------hcCCCCEEEEeCCCCCCCChHHH-HHHHHhC---
Confidence 47899999876643 223433221 11235799999999999986644 4444433
Q ss_pred HhhcCCcEEEEcCCchhhh
Q 016381 125 AKAEGGAVFQVNGNHETMN 143 (390)
Q Consensus 125 ~~~~g~~v~~lrGNHE~~~ 143 (390)
+..+++++||||...
T Consensus 69 ----~~~~~~v~GNHD~~~ 83 (168)
T cd07390 69 ----NGRKHLIKGNHDSSL 83 (168)
T ss_pred ----CCCeEEEeCCCCchh
Confidence 247999999999753
No 69
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.80 E-value=6.5e-05 Score=68.65 Aligned_cols=75 Identities=24% Similarity=0.290 Sum_probs=50.4
Q ss_pred eEEEEccCCCCH---------------HHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHH
Q 016381 59 RIVAVGDLHGDL---------------DQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDM 123 (390)
Q Consensus 59 ~i~vIGDiHG~~---------------~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~ 123 (390)
|++.++|+|=.. ..|.++++.+.-. +.+.+|+.||++|....+.+.+..+.....
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~ 70 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEE----------KVDFVLIAGDLFDSNNPSPEALELLIEALR 70 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhc----------CCCEEEECCcccCCCCCCHHHHHHHHHHHH
Confidence 588999999432 2355666554321 246899999999988766555555554444
Q ss_pred HHhhcCCcEEEEcCCchhhh
Q 016381 124 QAKAEGGAVFQVNGNHETMN 143 (390)
Q Consensus 124 ~~~~~g~~v~~lrGNHE~~~ 143 (390)
+..+.+..++++.||||...
T Consensus 71 ~~~~~~~~v~~~~GNHD~~~ 90 (223)
T cd00840 71 RLKEAGIPVFIIAGNHDSPS 90 (223)
T ss_pred HHHHCCCCEEEecCCCCCcc
Confidence 44333458999999999764
No 70
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=97.70 E-value=0.0007 Score=61.66 Aligned_cols=58 Identities=14% Similarity=0.276 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecCCCCccCCCceEEEEeCCeEE
Q 016381 310 INAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMSSGVLNSRPEVLEITDNKAR 372 (390)
Q Consensus 310 ~~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~~g~~~g~~~~L~i~~~~~~ 372 (390)
|++++..+.+.++-+++++||-+...|... . ++.+.|.-|+-.. |..+++.+...++.
T Consensus 194 GS~~V~dlIk~~~P~ivl~Ghihe~~~~e~-l-G~TlVVNPGsL~~---G~yAvI~l~~~~v~ 251 (255)
T PF14582_consen 194 GSAAVRDLIKTYNPDIVLCGHIHESHGKES-L-GKTLVVNPGSLAE---GDYAVIDLEQDKVE 251 (255)
T ss_dssp SBHHHHHHHHHH--SEEEE-SSS-EE--EE-E-TTEEEEE--BGGG---TEEEEEETTTTEEE
T ss_pred cHHHHHHHHHhcCCcEEEecccccchhhHH-h-CCEEEecCccccc---CceeEEEecccccc
Confidence 789999999999999999999988655433 2 5677777777664 77888888887754
No 71
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.60 E-value=0.00013 Score=64.53 Aligned_cols=47 Identities=21% Similarity=0.143 Sum_probs=28.7
Q ss_pred ccEEEEeCCccCCCCChH-HHHHHHHHhHHHHhhcCCcEEEEcCCchhhh
Q 016381 95 ESVLIQLGDVLDRGEDEL-AILSLLRSLDMQAKAEGGAVFQVNGNHETMN 143 (390)
Q Consensus 95 ~~~lvfLGD~vDRG~~s~-evl~~l~~l~~~~~~~g~~v~~lrGNHE~~~ 143 (390)
.+.+|++||+++...... +....+. +. .....+..+++++||||...
T Consensus 42 ~d~lii~GDl~~~~~~~~~~~~~~~~-~~-~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 42 PERLIILGDLKHSFGGLSRQEFEEVA-FL-RLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred CCEEEEeCcccccccccCHHHHHHHH-HH-HhccCCCeEEEEcccCccch
Confidence 479999999998654332 2222221 11 11113458999999999753
No 72
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.49 E-value=0.00039 Score=59.43 Aligned_cols=42 Identities=33% Similarity=0.440 Sum_probs=33.1
Q ss_pred CccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcCCchhh
Q 016381 94 GESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 94 ~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrGNHE~~ 142 (390)
++|.+++|||+.-.-....+..+.+.+| +|++++|+||||-.
T Consensus 45 p~D~lwhLGDl~~~~n~~~~a~~IlerL-------nGrkhlv~GNhDk~ 86 (186)
T COG4186 45 PDDVLWHLGDLSSGANRERAAGLILERL-------NGRKHLVPGNHDKC 86 (186)
T ss_pred ccceEEEecccccccchhhHHHHHHHHc-------CCcEEEeeCCCCCC
Confidence 4789999999987655566666666665 57899999999963
No 73
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.48 E-value=0.00026 Score=61.67 Aligned_cols=48 Identities=21% Similarity=0.234 Sum_probs=31.3
Q ss_pred ccEEEEeCCccCCCCCh-HH-HHHHHHHhHHHHhh-cCCcEEEEcCCchhh
Q 016381 95 ESVLIQLGDVLDRGEDE-LA-ILSLLRSLDMQAKA-EGGAVFQVNGNHETM 142 (390)
Q Consensus 95 ~~~lvfLGD~vDRG~~s-~e-vl~~l~~l~~~~~~-~g~~v~~lrGNHE~~ 142 (390)
.+.+|++||++|.+... .+ ....+..+...+.. .+-.++++.||||..
T Consensus 39 pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 39 PDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred CCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 46999999999987643 22 22334444433322 134799999999975
No 74
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.48 E-value=0.00031 Score=65.27 Aligned_cols=69 Identities=23% Similarity=0.211 Sum_probs=42.3
Q ss_pred EEEEccCCCC--------------HHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHH
Q 016381 60 IVAVGDLHGD--------------LDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQA 125 (390)
Q Consensus 60 i~vIGDiHG~--------------~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~ 125 (390)
|++++|+|-. .+.+.++.+.+.-.- +..|.+|+.||++++++.. +....+..++.
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~--------~~~D~viiaGDl~~~~~~~-~~~~~l~~l~~-- 69 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVV--------APEDIVLIPGDISWAMKLE-EAKLDLAWIDA-- 69 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcC--------CCCCEEEEcCCCccCCChH-HHHHHHHHHHh--
Confidence 5789999966 233444544432221 1357999999999877533 33333332322
Q ss_pred hhcCCcEEEEcCCchh
Q 016381 126 KAEGGAVFQVNGNHET 141 (390)
Q Consensus 126 ~~~g~~v~~lrGNHE~ 141 (390)
.+..+++|+||||.
T Consensus 70 --l~~~v~~V~GNHD~ 83 (232)
T cd07393 70 --LPGTKVLLKGNHDY 83 (232)
T ss_pred --CCCCeEEEeCCccc
Confidence 12358999999997
No 75
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.47 E-value=0.00021 Score=67.64 Aligned_cols=75 Identities=24% Similarity=0.265 Sum_probs=44.1
Q ss_pred EEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCCh-HHHH----------HHHHHhHHHHhhc
Q 016381 60 IVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDE-LAIL----------SLLRSLDMQAKAE 128 (390)
Q Consensus 60 i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s-~evl----------~~l~~l~~~~~~~ 128 (390)
|+|+||+||+++.+...++...-.. ....|.+|++||+-..+..+ .+.+ ++..-+.. ..+.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~-------~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g-~~~~ 72 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKE-------GTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSG-EKKA 72 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhc-------CCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcC-CccC
Confidence 5899999999999877554432110 01357999999997554332 2222 11111111 0112
Q ss_pred CCcEEEEcCCchhh
Q 016381 129 GGAVFQVNGNHETM 142 (390)
Q Consensus 129 g~~v~~lrGNHE~~ 142 (390)
+-.+++|.||||..
T Consensus 73 p~~t~fi~GNHE~~ 86 (262)
T cd00844 73 PILTIFIGGNHEAS 86 (262)
T ss_pred CeeEEEECCCCCCH
Confidence 33578999999974
No 76
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.37 E-value=0.00077 Score=67.65 Aligned_cols=77 Identities=18% Similarity=0.164 Sum_probs=55.6
Q ss_pred CCCeEEEEccCCCC------------HHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHH
Q 016381 56 PGRRIVAVGDLHGD------------LDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDM 123 (390)
Q Consensus 56 ~~~~i~vIGDiHG~------------~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~ 123 (390)
..|||+.++|+|-. +..|.++++.+.- ..-|.+++.||++|++.-|.+++..++++-.
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~----------~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr 71 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKE----------QDVDMILLGGDLFHENKPSRKSLYQVLRSLR 71 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHH----------cCCCEEEECCccCCCCCCCHHHHHHHHHHHH
Confidence 35799999999954 4567777777632 1257999999999999888777755555443
Q ss_pred HH------------------------h---------hcCCcEEEEcCCchhh
Q 016381 124 QA------------------------K---------AEGGAVFQVNGNHETM 142 (390)
Q Consensus 124 ~~------------------------~---------~~g~~v~~lrGNHE~~ 142 (390)
++ + +.+-.|++|-||||..
T Consensus 72 ~~~~g~~p~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p 123 (405)
T TIGR00583 72 LYCLGDKPCELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDP 123 (405)
T ss_pred HhhccCCccchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCc
Confidence 31 0 0245899999999985
No 77
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.36 E-value=0.00037 Score=64.53 Aligned_cols=41 Identities=20% Similarity=0.245 Sum_probs=28.2
Q ss_pred ccEEEEeCCccCCCCCh---HHHHHHHHHhHHHHhhcCCcEEEEcCCchhh
Q 016381 95 ESVLIQLGDVLDRGEDE---LAILSLLRSLDMQAKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 95 ~~~lvfLGD~vDRG~~s---~evl~~l~~l~~~~~~~g~~v~~lrGNHE~~ 142 (390)
.+.+|++||+++..... .++.+++..+. ..+++++||||..
T Consensus 59 ~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~-------~~v~~V~GNHD~~ 102 (225)
T TIGR00024 59 IEALIINGDLKHEFKKGLEWRFIREFIEVTF-------RDLILIRGNHDAL 102 (225)
T ss_pred CCEEEEcCccccccCChHHHHHHHHHHHhcC-------CcEEEECCCCCCc
Confidence 46899999999765542 23333443331 3799999999975
No 78
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=97.35 E-value=0.0042 Score=61.67 Aligned_cols=42 Identities=29% Similarity=0.332 Sum_probs=36.1
Q ss_pred ccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcCCchhhhc
Q 016381 95 ESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNGNHETMNV 144 (390)
Q Consensus 95 ~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrGNHE~~~l 144 (390)
-|+|-.+||+.||||.+-.+++.|.... .|-+-=||||...+
T Consensus 191 VDhLHiVGDIyDRGP~pd~Imd~L~~yh--------svDiQWGNHDilWm 232 (648)
T COG3855 191 VDHLHIVGDIYDRGPYPDKIMDTLINYH--------SVDIQWGNHDILWM 232 (648)
T ss_pred hhheeeecccccCCCCchHHHHHHhhcc--------cccccccCcceEEe
Confidence 4689999999999999999999998873 57778899997544
No 79
>PLN02533 probable purple acid phosphatase
Probab=97.24 E-value=0.0076 Score=61.18 Aligned_cols=73 Identities=19% Similarity=0.177 Sum_probs=40.9
Q ss_pred CCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEc
Q 016381 57 GRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVN 136 (390)
Q Consensus 57 ~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lr 136 (390)
+-+++++||+|-. .....+++.+.-. ..|.++++||+++-+.. ....+...++..... ..-.+..+.
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~----------~pD~vl~~GDl~y~~~~-~~~wd~f~~~i~~l~-s~~P~m~~~ 205 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKW----------DYDVFILPGDLSYANFY-QPLWDTFGRLVQPLA-SQRPWMVTH 205 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhc----------CCCEEEEcCccccccch-HHHHHHHHHHhhhHh-hcCceEEeC
Confidence 4489999999632 2223344443211 24689999999975432 122222222221111 113688999
Q ss_pred CCchhh
Q 016381 137 GNHETM 142 (390)
Q Consensus 137 GNHE~~ 142 (390)
||||..
T Consensus 206 GNHE~~ 211 (427)
T PLN02533 206 GNHELE 211 (427)
T ss_pred cccccc
Confidence 999975
No 80
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.24 E-value=0.00091 Score=63.48 Aligned_cols=74 Identities=27% Similarity=0.304 Sum_probs=48.5
Q ss_pred CeEEEEccCCCC------HHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCc
Q 016381 58 RRIVAVGDLHGD------LDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGA 131 (390)
Q Consensus 58 ~~i~vIGDiHG~------~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~ 131 (390)
|+++.|+|+|-. ...+.++++.+... ..|.+|+.||+.+.|. .+-++.+..+-. .-..+..
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~----------~~D~~v~tGDl~~~~~--~~~~~~~~~~l~-~~~~~~~ 67 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQL----------KPDLLVVTGDLTNDGE--PEEYRRLKELLA-RLELPAP 67 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcC----------CCCEEEEccCcCCCCC--HHHHHHHHHHHh-hccCCCc
Confidence 589999999988 34556666766522 2479999999999963 222222222222 0012347
Q ss_pred EEEEcCCchhhhc
Q 016381 132 VFQVNGNHETMNV 144 (390)
Q Consensus 132 v~~lrGNHE~~~l 144 (390)
++.++||||.+..
T Consensus 68 ~~~vpGNHD~~~~ 80 (301)
T COG1409 68 VIVVPGNHDARVV 80 (301)
T ss_pred eEeeCCCCcCCch
Confidence 9999999998754
No 81
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.21 E-value=0.00052 Score=65.73 Aligned_cols=74 Identities=27% Similarity=0.270 Sum_probs=54.0
Q ss_pred cCCCCeEEEEccCCCCHHH--HHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCC--CCChHHHHHHHHHhHHHHhhcC
Q 016381 54 SAPGRRIVAVGDLHGDLDQ--ARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDR--GEDELAILSLLRSLDMQAKAEG 129 (390)
Q Consensus 54 ~~~~~~i~vIGDiHG~~~~--l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDR--G~~s~evl~~l~~l~~~~~~~g 129 (390)
...+.+|+.++|+|-+... ..+.+..+.- ...|.+++.||++|+ -+...+++..+..|+..
T Consensus 41 ~~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~----------~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~----- 105 (284)
T COG1408 41 SLQGLKIVQLSDLHSLPFREEKLALLIAIAN----------ELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAP----- 105 (284)
T ss_pred ccCCeEEEEeehhhhchhhHHHHHHHHHHHh----------cCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhcc-----
Confidence 4456689999999998766 2223332211 113799999999995 66777888888888754
Q ss_pred CcEEEEcCCchhh
Q 016381 130 GAVFQVNGNHETM 142 (390)
Q Consensus 130 ~~v~~lrGNHE~~ 142 (390)
-.++++.||||..
T Consensus 106 ~gv~av~GNHd~~ 118 (284)
T COG1408 106 LGVFAVLGNHDYG 118 (284)
T ss_pred CCEEEEecccccc
Confidence 3799999999875
No 82
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=97.18 E-value=0.0012 Score=66.12 Aligned_cols=75 Identities=23% Similarity=0.279 Sum_probs=56.5
Q ss_pred CeEEEEccCCCC-------------HHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHH
Q 016381 58 RRIVAVGDLHGD-------------LDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQ 124 (390)
Q Consensus 58 ~~i~vIGDiHG~-------------~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~ 124 (390)
||++-++|.|=. ++.|..+++.+- + ..-|.+|+-||++|++.-|.+++..+....+.
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~----~------~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~ 70 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAK----E------EKVDFVLIAGDLFDTNNPSPRALKLFLEALRR 70 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHH----H------ccCCEEEEccccccCCCCCHHHHHHHHHHHHH
Confidence 689999999988 344555555542 1 12479999999999988787777776666666
Q ss_pred HhhcCCcEEEEcCCchhh
Q 016381 125 AKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 125 ~~~~g~~v~~lrGNHE~~ 142 (390)
....+-.|++|.||||..
T Consensus 71 l~~~~Ipv~~I~GNHD~~ 88 (390)
T COG0420 71 LKDAGIPVVVIAGNHDSP 88 (390)
T ss_pred hccCCCcEEEecCCCCch
Confidence 655667899999999975
No 83
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=97.12 E-value=0.019 Score=54.18 Aligned_cols=24 Identities=17% Similarity=0.140 Sum_probs=21.1
Q ss_pred hHHHHHHHHHHhCCcEEEEccccC
Q 016381 310 INAVLQDTLRAVGAKAMVVGHTPQ 333 (390)
Q Consensus 310 ~~~~~~~~l~~~~~~~iV~GHt~~ 333 (390)
.++.....|+..+-.+|..||++-
T Consensus 204 ~~~~s~~il~~~~P~~vfsGhdH~ 227 (257)
T cd08163 204 EPSLSEVILKAVQPVIAFSGDDHD 227 (257)
T ss_pred CHHHHHHHHHhhCCcEEEecCCCc
Confidence 567888999999999999999975
No 84
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=97.09 E-value=0.039 Score=53.29 Aligned_cols=48 Identities=17% Similarity=0.081 Sum_probs=31.0
Q ss_pred ccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcCCchhhh
Q 016381 95 ESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNGNHETMN 143 (390)
Q Consensus 95 ~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrGNHE~~~ 143 (390)
.|.+||+||.|+- -........+++-..=+-+.+-....+.||||...
T Consensus 101 PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 101 PDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDES 148 (379)
T ss_pred CCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEeccccccc
Confidence 5799999999995 44333333333322222234567889999999864
No 85
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=97.08 E-value=0.00083 Score=60.51 Aligned_cols=48 Identities=19% Similarity=0.320 Sum_probs=37.0
Q ss_pred ccEEEEeCCccCCCCCh--HHHHHHHHHhHHHHhh-cCCcEEEEcCCchhh
Q 016381 95 ESVLIQLGDVLDRGEDE--LAILSLLRSLDMQAKA-EGGAVFQVNGNHETM 142 (390)
Q Consensus 95 ~~~lvfLGD~vDRG~~s--~evl~~l~~l~~~~~~-~g~~v~~lrGNHE~~ 142 (390)
.|.+||+||++|.|+.+ .+..+.+.+++.-+.. .+-.+++|.||||.-
T Consensus 43 PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 43 PDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 46899999999999964 3577878777755432 244789999999975
No 86
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.01 E-value=0.00092 Score=62.50 Aligned_cols=72 Identities=18% Similarity=0.188 Sum_probs=40.2
Q ss_pred EEEccCC--CCH---HHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCC------------h----HHHHHHHH
Q 016381 61 VAVGDLH--GDL---DQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGED------------E----LAILSLLR 119 (390)
Q Consensus 61 ~vIGDiH--G~~---~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~------------s----~evl~~l~ 119 (390)
++|+|+| +.. ..+..+++.+.-...+ ....+.+|++||++|+... . ..+.+++.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~-----~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 76 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDS-----ASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLS 76 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCccc-----ccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHH
Confidence 6899999 331 2334444443211100 0124799999999997310 1 12233333
Q ss_pred HhHHHHhhcCCcEEEEcCCchhh
Q 016381 120 SLDMQAKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 120 ~l~~~~~~~g~~v~~lrGNHE~~ 142 (390)
++. .+-.|+++.||||..
T Consensus 77 ~L~-----~~~~v~~ipGNHD~~ 94 (243)
T cd07386 77 DVP-----SHIKIIIIPGNHDAV 94 (243)
T ss_pred hcc-----cCCeEEEeCCCCCcc
Confidence 332 134799999999974
No 87
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.90 E-value=0.0021 Score=60.25 Aligned_cols=67 Identities=25% Similarity=0.378 Sum_probs=45.8
Q ss_pred eEEEEccCCCCH---------HHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChH-----HHHHHHHHhHHH
Q 016381 59 RIVAVGDLHGDL---------DQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDEL-----AILSLLRSLDMQ 124 (390)
Q Consensus 59 ~i~vIGDiHG~~---------~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~-----evl~~l~~l~~~ 124 (390)
+++.++|+||.+ ..+..+++++.-. ..+..++..||+++.++.+. .+++.+..+
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~---------~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~--- 69 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAE---------NENTLLLDAGDNFDGSPPSTATKGEANIELMNAL--- 69 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhc---------CCCeEEEeCCccCCCccchhccCCcHHHHHHHhc---
Confidence 689999999776 6677777765321 12346788999999887653 555555544
Q ss_pred HhhcCCcEEEEcCCchhh
Q 016381 125 AKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 125 ~~~~g~~v~~lrGNHE~~ 142 (390)
|..+ +..||||.-
T Consensus 70 ----g~d~-~~~GNHe~d 82 (252)
T cd00845 70 ----GYDA-VTIGNHEFD 82 (252)
T ss_pred ----CCCE-Eeecccccc
Confidence 3344 456999963
No 88
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.84 E-value=0.0031 Score=55.85 Aligned_cols=48 Identities=25% Similarity=0.312 Sum_probs=31.5
Q ss_pred ccEEEEeCCccCCCCCh--HHHHHHHHHhHHHHhh-----cCCcEEEEcCCchhh
Q 016381 95 ESVLIQLGDVLDRGEDE--LAILSLLRSLDMQAKA-----EGGAVFQVNGNHETM 142 (390)
Q Consensus 95 ~~~lvfLGD~vDRG~~s--~evl~~l~~l~~~~~~-----~g~~v~~lrGNHE~~ 142 (390)
.+.+|++||++|.+... .+..+.+..+...+.. .+..++.|.||||..
T Consensus 46 pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 46 PDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred CCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 46999999999988643 2333344333333221 134799999999986
No 89
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.60 E-value=0.0047 Score=53.45 Aligned_cols=68 Identities=18% Similarity=0.267 Sum_probs=47.7
Q ss_pred EEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcCCch
Q 016381 61 VAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNGNHE 140 (390)
Q Consensus 61 ~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrGNHE 140 (390)
+|+||+||+++.+-+-++.+.-. .+.-|.+|++||+..-...+-+.-.++.. ..+ .+-..+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k--------~gpFd~~ic~Gdff~~~~~~~~~~~y~~g-~~~---~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKK--------KGPFDALLCVGDFFGDDEDDEELEAYKDG-SKK---VPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcc--------cCCeeEEEEecCccCCccchhhHHHHhcC-Ccc---CCCCEEEECCCCC
Confidence 48999999999998877764211 13357999999999866665443333333 233 3457899999998
No 90
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.41 E-value=0.0055 Score=56.54 Aligned_cols=76 Identities=26% Similarity=0.335 Sum_probs=46.4
Q ss_pred cCCCCeEEEEccCCCCHHHHH-------------HHHHHcC-CCCCCCCCCcCCCccEEEEeCCccCCCCC-----hHHH
Q 016381 54 SAPGRRIVAVGDLHGDLDQAR-------------CALEMAG-VLSSDGLDLWTGGESVLIQLGDVLDRGED-----ELAI 114 (390)
Q Consensus 54 ~~~~~~i~vIGDiHG~~~~l~-------------~lL~~~g-~~~~d~~~~w~~~~~~lvfLGD~vDRG~~-----s~ev 114 (390)
..+..++.||+|+|=.+.... ++++... ++. ..+.+.+|++||+-.-.+. ..++
T Consensus 16 ~l~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~-------~~~p~~lIilGD~KH~~~~~~~~e~~~~ 88 (235)
T COG1407 16 YLPLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIE-------RYGPKRLIILGDLKHEFGKSLRQEKEEV 88 (235)
T ss_pred EeccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHH-------hcCCCEEEEcCccccccCccccccHHHH
Confidence 334448999999998776544 2222221 121 1235689999999865433 2344
Q ss_pred HHHHHHhHHHHhhcCCcEEEEcCCchhh
Q 016381 115 LSLLRSLDMQAKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 115 l~~l~~l~~~~~~~g~~v~~lrGNHE~~ 142 (390)
..++..+.. ..++.++||||..
T Consensus 89 ~~f~~~~~~------~evi~i~GNHD~~ 110 (235)
T COG1407 89 REFLELLDE------REVIIIRGNHDNG 110 (235)
T ss_pred HHHHHHhcc------CcEEEEeccCCCc
Confidence 444444332 2599999999975
No 91
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=96.20 E-value=0.013 Score=52.75 Aligned_cols=69 Identities=14% Similarity=0.118 Sum_probs=43.2
Q ss_pred cCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCCh-HHHHHHHHHhHHHHhhc---------------
Q 016381 65 DLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDE-LAILSLLRSLDMQAKAE--------------- 128 (390)
Q Consensus 65 DiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s-~evl~~l~~l~~~~~~~--------------- 128 (390)
|++|+=.=|.++.+.+-. .-..+.++||||++|.|--+ .|=.+.+.+....+...
T Consensus 24 d~~~~D~YL~~~~~~~~~---------~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~ 94 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQF---------WLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTF 94 (193)
T ss_pred hhhhhHHHHHHHHHHHHH---------hcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCccccccccccccccc
Confidence 556664455555555421 22357999999999987433 33445566666555322
Q ss_pred ---CCcEEEEcCCchhh
Q 016381 129 ---GGAVFQVNGNHETM 142 (390)
Q Consensus 129 ---g~~v~~lrGNHE~~ 142 (390)
+-.++.|.||||.-
T Consensus 95 ~~~~i~~i~V~GNHDIG 111 (193)
T cd08164 95 EDGKTPLINIAGNHDVG 111 (193)
T ss_pred ccCCceEEEECCcccCC
Confidence 24678999999984
No 92
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.14 E-value=0.064 Score=45.70 Aligned_cols=64 Identities=19% Similarity=0.268 Sum_probs=45.8
Q ss_pred CeEEEEccCCC--CHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEE
Q 016381 58 RRIVAVGDLHG--DLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQV 135 (390)
Q Consensus 58 ~~i~vIGDiHG--~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~l 135 (390)
|-+.|+||+|= +..+|-.-++++=++ +.-.+++++|++. |.|+++++..+. .+++++
T Consensus 1 mLvL~lgD~HiP~Ra~~Lp~KFkklLvP---------gki~hilctGNlc-----s~e~~dylk~l~-------~dvhiV 59 (183)
T KOG3325|consen 1 MLVLVLGDLHIPHRANDLPAKFKKLLVP---------GKIQHILCTGNLC-----SKESYDYLKTLS-------SDVHIV 59 (183)
T ss_pred CEEEEeccccCCccccccCHHHHhccCC---------CceeEEEEeCCcc-----hHHHHHHHHhhC-------CCcEEE
Confidence 45789999995 334454444444232 2357899999964 679999999985 389999
Q ss_pred cCCchhh
Q 016381 136 NGNHETM 142 (390)
Q Consensus 136 rGNHE~~ 142 (390)
||--|..
T Consensus 60 rGeFD~~ 66 (183)
T KOG3325|consen 60 RGEFDEN 66 (183)
T ss_pred ecccCcc
Confidence 9987764
No 93
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.04 E-value=0.011 Score=56.46 Aligned_cols=65 Identities=28% Similarity=0.422 Sum_probs=40.6
Q ss_pred eEEEEccCCCCH----------------HHHHHHHHHcCCCCCCCCCCcCCCccEEE-EeCCccCCCCCh----------
Q 016381 59 RIVAVGDLHGDL----------------DQARCALEMAGVLSSDGLDLWTGGESVLI-QLGDVLDRGEDE---------- 111 (390)
Q Consensus 59 ~i~vIGDiHG~~----------------~~l~~lL~~~g~~~~d~~~~w~~~~~~lv-fLGD~vDRG~~s---------- 111 (390)
+|+.++|+||.+ ..+..+++++.-. ..+.++ ..||+++..+.+
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~----------~~~~l~ld~GD~~~gs~~~~~~~~~~~~~ 71 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAE----------NPNTLLIDNGDTIQGSPLADYYAKIEDGD 71 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhc----------CCCeEEEeCCccCCccHHHHHhhhcccCC
Confidence 588999999986 4466677665321 123444 489999976522
Q ss_pred -HHHHHHHHHhHHHHhhcCCcEEEEcCCchh
Q 016381 112 -LAILSLLRSLDMQAKAEGGAVFQVNGNHET 141 (390)
Q Consensus 112 -~evl~~l~~l~~~~~~~g~~v~~lrGNHE~ 141 (390)
..+++.+..+ +.. ++..||||.
T Consensus 72 ~~~~~~~ln~~-------g~d-~~~lGNHe~ 94 (277)
T cd07410 72 PHPMIAAMNAL-------GYD-AGTLGNHEF 94 (277)
T ss_pred CChHHHHHHhc-------CCC-EEeecccCc
Confidence 2355555554 234 455699995
No 94
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=95.18 E-value=0.047 Score=51.43 Aligned_cols=65 Identities=22% Similarity=0.349 Sum_probs=43.3
Q ss_pred eEEEEccCCCC----------HHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCCh-----HHHHHHHHHhHH
Q 016381 59 RIVAVGDLHGD----------LDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDE-----LAILSLLRSLDM 123 (390)
Q Consensus 59 ~i~vIGDiHG~----------~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s-----~evl~~l~~l~~ 123 (390)
+++.++|+||. +..+..++++..-. ..+.++..||+++..+.+ ..+++.+..+
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~----------~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~-- 69 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKL----------DNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV-- 69 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhc----------CCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc--
Confidence 68899999997 44566677664211 246899999999976543 2344444443
Q ss_pred HHhhcCCcEEEEcCCchh
Q 016381 124 QAKAEGGAVFQVNGNHET 141 (390)
Q Consensus 124 ~~~~~g~~v~~lrGNHE~ 141 (390)
|..+ ...||||.
T Consensus 70 -----g~d~-~~~GNHef 81 (257)
T cd07408 70 -----GYDA-VTPGNHEF 81 (257)
T ss_pred -----CCcE-Eccccccc
Confidence 4455 45699995
No 95
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=95.03 E-value=0.059 Score=51.74 Aligned_cols=67 Identities=25% Similarity=0.399 Sum_probs=44.7
Q ss_pred eEEEEccCCCCHH--------------HHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCC-h-----HHHHHHH
Q 016381 59 RIVAVGDLHGDLD--------------QARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGED-E-----LAILSLL 118 (390)
Q Consensus 59 ~i~vIGDiHG~~~--------------~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~-s-----~evl~~l 118 (390)
+|+.++|+||++. .+..+++++.-. .++..++..||++...+. + ..+++.+
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~---------~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~ 72 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQ---------NPNSLFVSAGDLIGASPFESALLQDEPTIEAL 72 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhc---------CCCeEEEeCCcccccccchhhcccCCcHHHHH
Confidence 5889999998744 466777665321 124689999999987664 2 2456666
Q ss_pred HHhHHHHhhcCCcEEEEcCCchhh
Q 016381 119 RSLDMQAKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 119 ~~l~~~~~~~g~~v~~lrGNHE~~ 142 (390)
..+ |-.+ +..||||.-
T Consensus 73 n~~-------g~Da-~t~GNHefd 88 (288)
T cd07412 73 NAM-------GVDA-SAVGNHEFD 88 (288)
T ss_pred Hhh-------CCee-eeecccccc
Confidence 555 2344 566999963
No 96
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=94.69 E-value=0.082 Score=50.06 Aligned_cols=43 Identities=16% Similarity=0.138 Sum_probs=28.0
Q ss_pred HHHHHHHHHHhCCcEEEEccccCCCCceeeeCCeEEEEEecCCC
Q 016381 311 NAVLQDTLRAVGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMSS 354 (390)
Q Consensus 311 ~~~~~~~l~~~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~~ 354 (390)
.+.+.+.+++.++++++.||++...-+. .....+..|-+|+..
T Consensus 190 ~~~l~~l~~~~~v~~vl~GH~H~~~~~~-~~~~~~~~i~~G~~~ 232 (277)
T cd07378 190 VDRLLPLLKKYKVDAYLSGHDHNLQHIK-DDGSGTSFVVSGAGS 232 (277)
T ss_pred HHHHHHHHHHcCCCEEEeCCcccceeee-cCCCCcEEEEeCCCc
Confidence 4567888888999999999999854221 111245555555443
No 97
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=94.57 E-value=0.074 Score=50.33 Aligned_cols=34 Identities=15% Similarity=0.187 Sum_probs=20.0
Q ss_pred hCCcEEEEccccCCCCceeeeCCeEEEEEecCCC
Q 016381 321 VGAKAMVVGHTPQFAGANCEYNCSIWRIDVGMSS 354 (390)
Q Consensus 321 ~~~~~iV~GHt~~~~G~~~~~~~~~i~IDtG~~~ 354 (390)
.+++.|+.||+++...-.....++.+.+-+|+..
T Consensus 206 ~~iDlilgGH~H~~~~~~~~~~~~t~v~~~g~~~ 239 (264)
T cd07411 206 PGIDVILSGHTHERTPKPIIAGGGTLVVEAGSHG 239 (264)
T ss_pred CCCcEEEeCcccccccCcccccCCEEEEEcCccc
Confidence 4799999999997431110112456666665543
No 98
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=94.38 E-value=0.065 Score=53.39 Aligned_cols=53 Identities=21% Similarity=0.281 Sum_probs=40.6
Q ss_pred CcCCCccEEEEeCCccCCCCCh--HHHHHHHHHhHHHHhhc-CCcEEEEcCCchhh
Q 016381 90 LWTGGESVLIQLGDVLDRGEDE--LAILSLLRSLDMQAKAE-GGAVFQVNGNHETM 142 (390)
Q Consensus 90 ~w~~~~~~lvfLGD~vDRG~~s--~evl~~l~~l~~~~~~~-g~~v~~lrGNHE~~ 142 (390)
+|....|.++||||++|-|+.. -|=-+...+++.-++.. ...+..+.||||.-
T Consensus 89 ~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDIG 144 (410)
T KOG3662|consen 89 QWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDIG 144 (410)
T ss_pred HhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCccccc
Confidence 4455678999999999988754 56667777777777653 34689999999974
No 99
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=94.23 E-value=0.12 Score=48.96 Aligned_cols=68 Identities=21% Similarity=0.284 Sum_probs=50.3
Q ss_pred CeEEEEccCCCC--HHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCC-CChHHHHHHHHHhHHHHhhcCCcEEE
Q 016381 58 RRIVAVGDLHGD--LDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRG-EDELAILSLLRSLDMQAKAEGGAVFQ 134 (390)
Q Consensus 58 ~~i~vIGDiHG~--~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG-~~s~evl~~l~~l~~~~~~~g~~v~~ 134 (390)
|||++||||=|. ...+...|..+.-. ...|.+|..||...-| .-+.++++.|.++ |-+++.
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~---------~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~-------GvDviT 64 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSK---------YQADLVIANGENTTHGKGLTLKIYEFLKQS-------GVNYIT 64 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHh---------CCCCEEEEcCcccCCCCCCCHHHHHHHHhc-------CCCEEE
Confidence 789999999999 56677777665321 1246889999999766 4567888888765 457766
Q ss_pred EcCCchhh
Q 016381 135 VNGNHETM 142 (390)
Q Consensus 135 lrGNHE~~ 142 (390)
+ |||+.-
T Consensus 65 ~-GNH~~D 71 (266)
T TIGR00282 65 M-GNHTWF 71 (266)
T ss_pred c-cchhcc
Confidence 6 999974
No 100
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=93.82 E-value=0.73 Score=46.56 Aligned_cols=26 Identities=12% Similarity=0.161 Sum_probs=21.9
Q ss_pred HHHHHHHHHhCCcEEEEccccCCCCc
Q 016381 312 AVLQDTLRAVGAKAMVVGHTPQFAGA 337 (390)
Q Consensus 312 ~~~~~~l~~~~~~~iV~GHt~~~~G~ 337 (390)
..+++.+-++++++++-||.+.=+..
T Consensus 322 ~~LE~l~~~~~VDvvf~GHvH~YER~ 347 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHVHRYERF 347 (452)
T ss_pred HHHHHHHHHhceeEEEeccceehhcc
Confidence 46889999999999999999985543
No 101
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=93.81 E-value=0.14 Score=48.17 Aligned_cols=66 Identities=20% Similarity=0.226 Sum_probs=44.4
Q ss_pred eEEEEccCC----------CCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCC-----hHHHHHHHHHhHH
Q 016381 59 RIVAVGDLH----------GDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGED-----ELAILSLLRSLDM 123 (390)
Q Consensus 59 ~i~vIGDiH----------G~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~-----s~evl~~l~~l~~ 123 (390)
+++-+.|+| |.+..+..++++..-. .++..++..||+++.++. ...+++.+..+.
T Consensus 2 ~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~---------~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~- 71 (257)
T cd07406 2 TILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKE---------NPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG- 71 (257)
T ss_pred eEEEEccceeecccCCCCcCCHHHHHHHHHHHHhc---------CCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-
Confidence 455666777 4578888888875421 124589999999987753 246666666552
Q ss_pred HHhhcCCcEEEEcCCchh
Q 016381 124 QAKAEGGAVFQVNGNHET 141 (390)
Q Consensus 124 ~~~~~g~~v~~lrGNHE~ 141 (390)
--..+.||||.
T Consensus 72 -------~d~~~~GNHef 82 (257)
T cd07406 72 -------VDLACFGNHEF 82 (257)
T ss_pred -------CcEEeeccccc
Confidence 23557899996
No 102
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=93.30 E-value=0.22 Score=47.61 Aligned_cols=67 Identities=18% Similarity=0.185 Sum_probs=41.6
Q ss_pred eEEEEccCCCC---------------------HHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCC-----hH
Q 016381 59 RIVAVGDLHGD---------------------LDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGED-----EL 112 (390)
Q Consensus 59 ~i~vIGDiHG~---------------------~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~-----s~ 112 (390)
+++.++|+||+ +..+..+++++.-. .++..++..||+++..+. ..
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~---------~~~~l~ld~GD~~~gs~~~~~~~g~ 72 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAE---------NPNVLFLNAGDAFQGTLWYTLYKGN 72 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhc---------CCCEEEEeCCCCCCCcchhhhcCCh
Confidence 57888999976 45566666664321 123466679999987653 23
Q ss_pred HHHHHHHHhHHHHhhcCCcEEEEcCCchhh
Q 016381 113 AILSLLRSLDMQAKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 113 evl~~l~~l~~~~~~~g~~v~~lrGNHE~~ 142 (390)
.+++.+..+ |-.+. ..||||.-
T Consensus 73 ~~~~~ln~~-------g~D~~-~lGNHefd 94 (281)
T cd07409 73 ADAEFMNLL-------GYDAM-TLGNHEFD 94 (281)
T ss_pred HHHHHHHhc-------CCCEE-Eecccccc
Confidence 445555444 34555 45999963
No 103
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=92.35 E-value=0.22 Score=57.01 Aligned_cols=67 Identities=22% Similarity=0.365 Sum_probs=43.1
Q ss_pred CeEEEEccCCCC---HHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCCh-----HHHHHHHHHhHHHHhhcC
Q 016381 58 RRIVAVGDLHGD---LDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDE-----LAILSLLRSLDMQAKAEG 129 (390)
Q Consensus 58 ~~i~vIGDiHG~---~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s-----~evl~~l~~l~~~~~~~g 129 (390)
.+|+.++|+||. +..+..+++++.-. .++..++..||+++..+.+ ..+++.+..+ |
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~---------~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~l-------g 724 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEE---------NPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEM-------G 724 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhh---------CCCeEEEecCCCCCCcchhhhcCChHHHHHHhCc-------C
Confidence 479999999987 45556666654311 1123344489999987644 3556666555 2
Q ss_pred CcEEEEcCCchh
Q 016381 130 GAVFQVNGNHET 141 (390)
Q Consensus 130 ~~v~~lrGNHE~ 141 (390)
--....||||.
T Consensus 725 -~d~~~~GNHEf 735 (1163)
T PRK09419 725 -YDASTFGNHEF 735 (1163)
T ss_pred -CCEEEeccccc
Confidence 23459999996
No 104
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=91.95 E-value=0.079 Score=46.67 Aligned_cols=77 Identities=27% Similarity=0.403 Sum_probs=46.7
Q ss_pred CeEEEEccCCCCHHHHHHHHHHcCCC--CCC--CCCCcCC---CccEEEEeCCcc--CCCCChHHHHHHHHHhHHHHhhc
Q 016381 58 RRIVAVGDLHGDLDQARCALEMAGVL--SSD--GLDLWTG---GESVLIQLGDVL--DRGEDELAILSLLRSLDMQAKAE 128 (390)
Q Consensus 58 ~~i~vIGDiHG~~~~l~~lL~~~g~~--~~d--~~~~w~~---~~~~lvfLGD~v--DRG~~s~evl~~l~~l~~~~~~~ 128 (390)
|++|+|.|+|-.+..- +-++.+|-. ..+ ...+|.. ..|.+..-||+- -|=++..+=+.++-.|
T Consensus 1 M~iyaiaDLHLa~~~p-KpM~vFGe~W~gh~ekI~k~W~~~v~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L------- 72 (230)
T COG1768 1 MRIYAIADLHLALGVP-KPMEVFGEPWSGHHEKIKKHWRSKVSPEDIVLLPGDISWAMRLEEAEEDLRFIGDL------- 72 (230)
T ss_pred CceeeeehhhHhhCCC-CceeecCCcccCchHHHHHHHHhcCChhhEEEecccchhheechhhhhhhhhhhcC-------
Confidence 6889999998554322 222222210 000 0124443 368899999985 3455666667777666
Q ss_pred CCcEEEEcCCchhh
Q 016381 129 GGAVFQVNGNHETM 142 (390)
Q Consensus 129 g~~v~~lrGNHE~~ 142 (390)
+|.=+++|||||..
T Consensus 73 PG~K~m~rGNHDYW 86 (230)
T COG1768 73 PGTKYMIRGNHDYW 86 (230)
T ss_pred CCcEEEEecCCccc
Confidence 56778999999986
No 105
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=91.08 E-value=0.46 Score=45.52 Aligned_cols=72 Identities=24% Similarity=0.267 Sum_probs=42.7
Q ss_pred EEccCCCC--HHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChH--H------HHHHHHHhHHHHhhcCCc
Q 016381 62 AVGDLHGD--LDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDEL--A------ILSLLRSLDMQAKAEGGA 131 (390)
Q Consensus 62 vIGDiHG~--~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~--e------vl~~l~~l~~~~~~~g~~ 131 (390)
-.|+..=+ ...+..+++.+.-.. +..+.+|+.||+++-+.... + .-.+...++..++ +-.
T Consensus 42 ~~G~~~CD~p~~l~~s~l~~i~~~~--------~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~p 111 (296)
T cd00842 42 PWGDYGCDSPWRLVESALEAIKKNH--------PKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFP--DTP 111 (296)
T ss_pred CCcCcCCCCcHHHHHHHHHHHHHhC--------CCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCC--CCC
Confidence 35665422 345666776653221 23579999999998876431 1 1222233333333 357
Q ss_pred EEEEcCCchhhh
Q 016381 132 VFQVNGNHETMN 143 (390)
Q Consensus 132 v~~lrGNHE~~~ 143 (390)
|+.+.||||...
T Consensus 112 v~~~~GNHD~~p 123 (296)
T cd00842 112 VYPALGNHDSYP 123 (296)
T ss_pred EEEcCCCCCCCc
Confidence 999999999864
No 106
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=90.95 E-value=1.3 Score=41.86 Aligned_cols=78 Identities=23% Similarity=0.338 Sum_probs=47.4
Q ss_pred cCCCCeEEEEccC--CCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCcc-CCCCChH------HHHHHHHHhHHH
Q 016381 54 SAPGRRIVAVGDL--HGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVL-DRGEDEL------AILSLLRSLDMQ 124 (390)
Q Consensus 54 ~~~~~~i~vIGDi--HG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~v-DRG~~s~------evl~~l~~l~~~ 124 (390)
..++-+++||||- +|-+..-+.+++... +.++ -+.+.++-+||=+ |-|..+. +..+-+..
T Consensus 40 ~dgslsflvvGDwGr~g~~nqs~va~qmg~-ige~------l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT---- 108 (336)
T KOG2679|consen 40 SDGSLSFLVVGDWGRRGSFNQSQVALQMGE-IGEK------LDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYT---- 108 (336)
T ss_pred CCCceEEEEEcccccCCchhHHHHHHHHHh-HHHh------ccceEEEecCCcccccCCCCCCChhHHhhhhhccc----
Confidence 3456689999994 788777666665422 2111 2357899999966 5565442 22222222
Q ss_pred HhhcCCcEEEEcCCchhh
Q 016381 125 AKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 125 ~~~~g~~v~~lrGNHE~~ 142 (390)
+|......+.|.||||.+
T Consensus 109 ~pSLQkpWy~vlGNHDyr 126 (336)
T KOG2679|consen 109 APSLQKPWYSVLGNHDYR 126 (336)
T ss_pred CcccccchhhhccCcccc
Confidence 122223678899999986
No 107
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=89.77 E-value=0.91 Score=42.83 Aligned_cols=67 Identities=24% Similarity=0.209 Sum_probs=46.4
Q ss_pred eEEEEccCCCCH--HHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCC-CChHHHHHHHHHhHHHHhhcCCcEEEE
Q 016381 59 RIVAVGDLHGDL--DQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRG-EDELAILSLLRSLDMQAKAEGGAVFQV 135 (390)
Q Consensus 59 ~i~vIGDiHG~~--~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG-~~s~evl~~l~~l~~~~~~~g~~v~~l 135 (390)
|+++||||=|.. ..+...|.++.-. ...|.+|-.||..--| .-+.++.+.|..+ |-.+..+
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~---------~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~-------G~D~iTl 64 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKE---------YKIDFVIANGENAAGGKGITPKIAKELLSA-------GVDVITM 64 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHH---------CCCCEEEECCccccCCCCCCHHHHHHHHhc-------CCCEEEe
Confidence 589999999986 4445666554211 1246888899998766 3567777777776 4466655
Q ss_pred cCCchhh
Q 016381 136 NGNHETM 142 (390)
Q Consensus 136 rGNHE~~ 142 (390)
||||.-
T Consensus 65 -GNH~fD 70 (255)
T cd07382 65 -GNHTWD 70 (255)
T ss_pred -cccccC
Confidence 999863
No 108
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=88.75 E-value=0.85 Score=48.89 Aligned_cols=69 Identities=25% Similarity=0.313 Sum_probs=45.6
Q ss_pred CCeEEEEccCCCCHH----------------HHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChH--------
Q 016381 57 GRRIVAVGDLHGDLD----------------QARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDEL-------- 112 (390)
Q Consensus 57 ~~~i~vIGDiHG~~~----------------~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~-------- 112 (390)
..+|+...|+||++. .+..+++++.-. ..+..+|-.||++...|-+.
T Consensus 25 ~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e---------~~n~llvD~GD~~qGsp~~~~~~~~~~~ 95 (649)
T PRK09420 25 DLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAE---------AKNSVLVDNGDLIQGSPLGDYMAAKGLK 95 (649)
T ss_pred eEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHh---------CCCEEEEECCCcCCCchhhhhhhhcccc
Confidence 348999999999863 344555554211 12468999999998766431
Q ss_pred -----HHHHHHHHhHHHHhhcCCcEEEEcCCchhh
Q 016381 113 -----AILSLLRSLDMQAKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 113 -----evl~~l~~l~~~~~~~g~~v~~lrGNHE~~ 142 (390)
.+++.+..+. -=....||||.-
T Consensus 96 ~g~~~p~i~amN~lg--------yDa~tlGNHEFd 122 (649)
T PRK09420 96 AGDVHPVYKAMNTLD--------YDVGNLGNHEFN 122 (649)
T ss_pred CCCcchHHHHHHhcC--------CcEEeccchhhh
Confidence 3566666652 335789999964
No 109
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=88.14 E-value=1 Score=43.89 Aligned_cols=70 Identities=17% Similarity=0.142 Sum_probs=42.8
Q ss_pred eEEEEccCCCCH------HHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCC-------------hHHHHHHHH
Q 016381 59 RIVAVGDLHGDL------DQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGED-------------ELAILSLLR 119 (390)
Q Consensus 59 ~i~vIGDiHG~~------~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~-------------s~evl~~l~ 119 (390)
.|+-+.|+||++ ..+..++++..-..+. ...+..++..||.+.-++. ...+++++.
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~-----~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN 76 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAA-----EYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILN 76 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhc-----cCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHh
Confidence 478899999995 3444455543211000 0124689999999976543 345566666
Q ss_pred HhHHHHhhcCCcEEEEcCCchh
Q 016381 120 SLDMQAKAEGGAVFQVNGNHET 141 (390)
Q Consensus 120 ~l~~~~~~~g~~v~~lrGNHE~ 141 (390)
.+. -=.+..||||.
T Consensus 77 ~~g--------~Da~tlGNHEF 90 (313)
T cd08162 77 ALG--------VQAIALGNHEF 90 (313)
T ss_pred ccC--------CcEEecccccc
Confidence 653 22467999995
No 110
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=87.78 E-value=0.87 Score=43.63 Aligned_cols=71 Identities=20% Similarity=0.221 Sum_probs=40.9
Q ss_pred eEEEEccCCCCHHH----------HHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCC-----hHHHHHHHHHhHH
Q 016381 59 RIVAVGDLHGDLDQ----------ARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGED-----ELAILSLLRSLDM 123 (390)
Q Consensus 59 ~i~vIGDiHG~~~~----------l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~-----s~evl~~l~~l~~ 123 (390)
.|+.++|+||++.. +..+++++.-.. .. ...+..++-.||.+.-.+. ...+++++..+
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~-~~----~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~-- 74 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREV-AA----QGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLV-- 74 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHh-hc----cCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhh--
Confidence 57889999997533 555555542100 00 0224688999999854332 23444555444
Q ss_pred HHhhcCCcEEEEcCCchhh
Q 016381 124 QAKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 124 ~~~~~g~~v~~lrGNHE~~ 142 (390)
|-.+. ..||||.-
T Consensus 75 -----g~Da~-~~GNHEfD 87 (285)
T cd07405 75 -----GYDAM-AVGNHEFD 87 (285)
T ss_pred -----CCcEE-eecccccc
Confidence 34555 44999963
No 111
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=86.84 E-value=1.2 Score=47.60 Aligned_cols=67 Identities=27% Similarity=0.292 Sum_probs=43.5
Q ss_pred eEEEEccCCCCHH----------------HHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCCh-----------
Q 016381 59 RIVAVGDLHGDLD----------------QARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDE----------- 111 (390)
Q Consensus 59 ~i~vIGDiHG~~~----------------~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s----------- 111 (390)
+|+-+.|+||++. .+..+++++.-- ..+..++-.||.+...|.+
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e---------~~n~lllD~GD~~qGsp~~~~~~~~~~~~~ 74 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAE---------VKNSVLVDNGDLIQGSPLGDYMAAQGLKAG 74 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhh---------CCCeEEEECCCcCCCccchhhhhhccccCC
Confidence 6889999999864 344555554210 1246899999999865543
Q ss_pred --HHHHHHHHHhHHHHhhcCCcEEEEcCCchhh
Q 016381 112 --LAILSLLRSLDMQAKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 112 --~evl~~l~~l~~~~~~~g~~v~~lrGNHE~~ 142 (390)
..+++++..+. -. ....||||.-
T Consensus 75 ~~~p~~~~mN~lg-------yD-a~tlGNHEFd 99 (626)
T TIGR01390 75 QMHPVYKAMNLLK-------YD-VGNLGNHEFN 99 (626)
T ss_pred CcChHHHHHhhcC-------cc-EEeccccccc
Confidence 23555555552 23 4788999953
No 112
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.82 E-value=1.8 Score=43.60 Aligned_cols=70 Identities=14% Similarity=0.242 Sum_probs=49.4
Q ss_pred CeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcC
Q 016381 58 RRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNG 137 (390)
Q Consensus 58 ~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrG 137 (390)
-+|+|+||+-|+++.|.+-.+.+.-. .+.=|.+|++|++++--.++.|++++....+. .+-.++++-+
T Consensus 6 ~kILv~Gd~~Gr~~eli~rI~~v~Kk--------~GpFd~liCvGnfF~~~~~~~e~~~ykng~~~----vPiptY~~g~ 73 (528)
T KOG2476|consen 6 AKILVCGDVEGRFDELIKRIQKVNKK--------SGPFDLLICVGNFFGHDTQNAEVEKYKNGTKK----VPIPTYFLGD 73 (528)
T ss_pred ceEEEEcCccccHHHHHHHHHHHhhc--------CCCceEEEEecccCCCccchhHHHHHhcCCcc----CceeEEEecC
Confidence 38999999999999987766654321 12346899999999976777888877755432 2335566655
Q ss_pred Cc
Q 016381 138 NH 139 (390)
Q Consensus 138 NH 139 (390)
|-
T Consensus 74 ~~ 75 (528)
T KOG2476|consen 74 NA 75 (528)
T ss_pred CC
Confidence 54
No 113
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=86.67 E-value=1.3 Score=42.50 Aligned_cols=71 Identities=21% Similarity=0.202 Sum_probs=40.5
Q ss_pred CeEEEEccCCCCHHH-------------HHHHHHHcC-CCCCCCCCCcCCCccEEEEeCCccCCCCCh-------HHHHH
Q 016381 58 RRIVAVGDLHGDLDQ-------------ARCALEMAG-VLSSDGLDLWTGGESVLIQLGDVLDRGEDE-------LAILS 116 (390)
Q Consensus 58 ~~i~vIGDiHG~~~~-------------l~~lL~~~g-~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s-------~evl~ 116 (390)
-+|+-+.|+||.+.. +.++.+.+. ...+ ...+..++..||.+...+.+ ..+++
T Consensus 6 ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~------~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~ 79 (282)
T cd07407 6 INFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQ------KGVDLLLVDTGDLHDGNGLSDASPPPGSYSNP 79 (282)
T ss_pred EEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHh------cCCCEEEEeCCCccCCeeceeeecCCChHHHH
Confidence 378999999997641 223222211 0000 01234677899999865433 33455
Q ss_pred HHHHhHHHHhhcCCcEEEEcCCchhh
Q 016381 117 LLRSLDMQAKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 117 ~l~~l~~~~~~~g~~v~~lrGNHE~~ 142 (390)
++..+ +-=.+..||||.-
T Consensus 80 ~mN~m--------gyDa~tlGNHEFd 97 (282)
T cd07407 80 IFRMM--------PYDLLTIGNHELY 97 (282)
T ss_pred HHHhc--------CCcEEeecccccC
Confidence 55555 2335789999984
No 114
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=85.44 E-value=2.7 Score=42.82 Aligned_cols=78 Identities=23% Similarity=0.239 Sum_probs=47.8
Q ss_pred eEEEEccCCCC-----HHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCC------------CChHHHHHHHHHh
Q 016381 59 RIVAVGDLHGD-----LDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRG------------EDELAILSLLRSL 121 (390)
Q Consensus 59 ~i~vIGDiHG~-----~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG------------~~s~evl~~l~~l 121 (390)
.+.+|+|+|=. -+.+...++-++-.. + .-..-..+++.||.||-. .+..+-++.+..+
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~-~----~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~ 301 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPG-D----LASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEF 301 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCc-c----cccceEEEEEecccccccccccCcccccccccchHHHHHHHHH
Confidence 68999999972 244455555543321 0 011235789999999942 2233445555555
Q ss_pred HHHHhhcCCcEEEEcCCchhh
Q 016381 122 DMQAKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 122 ~~~~~~~g~~v~~lrGNHE~~ 142 (390)
-.+.|. --.|++.+||||..
T Consensus 302 L~~vp~-~I~v~i~PGnhDa~ 321 (481)
T COG1311 302 LDQVPE-HIKVFIMPGNHDAV 321 (481)
T ss_pred HhhCCC-CceEEEecCCCCcc
Confidence 555553 22689999999975
No 115
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=85.32 E-value=3.3 Score=39.06 Aligned_cols=48 Identities=19% Similarity=0.195 Sum_probs=30.3
Q ss_pred ccEEEEeCCccCCCCC------------------hHHHHHHHHHhHHHHhhcCCcEEEEcCCchhhh
Q 016381 95 ESVLIQLGDVLDRGED------------------ELAILSLLRSLDMQAKAEGGAVFQVNGNHETMN 143 (390)
Q Consensus 95 ~~~lvfLGD~vDRG~~------------------s~evl~~l~~l~~~~~~~g~~v~~lrGNHE~~~ 143 (390)
-.++|+.||.|+.-.. ..+-++.+-.+-.+.++ .-.|.+++||||-..
T Consensus 43 I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~l~~-~i~V~imPG~~Dp~~ 108 (257)
T cd07387 43 IVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQLAS-SVPVDLMPGEFDPAN 108 (257)
T ss_pred eEEEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHhhhc-CCeEEECCCCCCccc
Confidence 4689999999996432 23334444443333332 237899999999754
No 116
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=84.93 E-value=1.4 Score=50.61 Aligned_cols=68 Identities=25% Similarity=0.364 Sum_probs=42.4
Q ss_pred CeEEEEccCCCCH----------------HHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCC-----------
Q 016381 58 RRIVAVGDLHGDL----------------DQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGED----------- 110 (390)
Q Consensus 58 ~~i~vIGDiHG~~----------------~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~----------- 110 (390)
-+|+.++|+||++ ..+..+++++.-. ..+..++-.||++...+-
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~---------~~n~llld~GD~~qGs~l~~~~~~~~~~~ 112 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKE---------NPNTLLVDNGDLIQGNPLGEYAVKDNILF 112 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHh---------CCCeEEEeCCCccCCChhhhHHhhhcccc
Confidence 4799999999985 3445555554211 123456669999986652
Q ss_pred ---hHHHHHHHHHhHHHHhhcCCcEEEEcCCchhh
Q 016381 111 ---ELAILSLLRSLDMQAKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 111 ---s~evl~~l~~l~~~~~~~g~~v~~lrGNHE~~ 142 (390)
...+++.+..+ |.. ....||||.-
T Consensus 113 ~~~~~~~i~~mN~l-------gyD-a~~lGNHEFd 139 (1163)
T PRK09419 113 KNKTHPMIKAMNAL-------GYD-AGTLGNHEFN 139 (1163)
T ss_pred CCCcCHHHHHHhhc-------Ccc-EEeecccccc
Confidence 12455555554 224 4679999963
No 117
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=84.75 E-value=1.5 Score=45.60 Aligned_cols=68 Identities=24% Similarity=0.374 Sum_probs=46.3
Q ss_pred CeEEEEccCCCCHH---------------HHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCC------ChHHHHH
Q 016381 58 RRIVAVGDLHGDLD---------------QARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGE------DELAILS 116 (390)
Q Consensus 58 ~~i~vIGDiHG~~~---------------~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~------~s~evl~ 116 (390)
-+|+-+.|+||.+. ....+.++..- + ..+..+|-.||+++..+ .....++
T Consensus 27 l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra---~------~~~~llld~GD~~~G~~l~~~~~~g~~~~~ 97 (517)
T COG0737 27 LTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRA---E------NKNVLLLDAGDLIQGSPLSDYLTKGEPTVD 97 (517)
T ss_pred EEEEEeccccccceeccccccCcccccHHHHHHHHHHHHh---h------cCCeEEEeCCcccCCccccccccCCChHHH
Confidence 37899999999998 34444444321 1 12568999999999843 3456777
Q ss_pred HHHHhHHHHhhcCCcEEEEcCCchhh
Q 016381 117 LLRSLDMQAKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 117 ~l~~l~~~~~~~g~~v~~lrGNHE~~ 142 (390)
.+..+.- . ....||||.-
T Consensus 98 ~mN~m~y-------D-a~tiGNHEFd 115 (517)
T COG0737 98 LLNALGY-------D-AMTLGNHEFD 115 (517)
T ss_pred HHhhcCC-------c-EEeecccccc
Confidence 7777632 3 4788999975
No 118
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=84.64 E-value=3 Score=45.80 Aligned_cols=68 Identities=26% Similarity=0.277 Sum_probs=43.8
Q ss_pred CeEEEEccCCCCHH----------------HHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCCh----------
Q 016381 58 RRIVAVGDLHGDLD----------------QARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDE---------- 111 (390)
Q Consensus 58 ~~i~vIGDiHG~~~----------------~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s---------- 111 (390)
.+|+-+.|+||++. .+..+++++.-- ..+..++-.||++...|.+
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae---------~~NtLllD~GD~iQGSpl~~~~a~~~~~~ 186 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKE---------NPNVVLVDNGDTIQGTPLGTYKAIVDPVE 186 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHh---------CCCEEEEecCCCCCCCcccchhhhccccc
Confidence 47899999999954 333444443210 1246899999999865532
Q ss_pred ----HHHHHHHHHhHHHHhhcCCcEEEEcCCchhh
Q 016381 112 ----LAILSLLRSLDMQAKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 112 ----~evl~~l~~l~~~~~~~g~~v~~lrGNHE~~ 142 (390)
..+++++..|. -=....||||+-
T Consensus 187 ~g~~~P~i~amN~LG--------yDA~tLGNHEFD 213 (814)
T PRK11907 187 EGEQHPMYAALEALG--------FDAGTLGNHEFN 213 (814)
T ss_pred cCcchHHHHHHhccC--------CCEEEechhhcc
Confidence 13566666552 335788999964
No 119
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=84.01 E-value=0.96 Score=42.65 Aligned_cols=68 Identities=22% Similarity=0.205 Sum_probs=43.0
Q ss_pred CCCCeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEE
Q 016381 55 APGRRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQ 134 (390)
Q Consensus 55 ~~~~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~ 134 (390)
.+..|.+.|+|.|...+.... .+..|.++.+||+..-|. +.||+.+=..+-.. | . ..=+.
T Consensus 59 ~~~~r~VcisdtH~~~~~i~~----------------~p~gDvlihagdfT~~g~-~~ev~~fn~~~gsl-p-h-~yKIV 118 (305)
T KOG3947|consen 59 PGYARFVCISDTHELTFDIND----------------IPDGDVLIHAGDFTNLGL-PEEVIKFNEWLGSL-P-H-EYKIV 118 (305)
T ss_pred CCceEEEEecCcccccCcccc----------------CCCCceEEeccCCccccC-HHHHHhhhHHhccC-c-c-eeeEE
Confidence 345589999999998655331 133678999999987554 45555443322111 1 0 13357
Q ss_pred EcCCchhh
Q 016381 135 VNGNHETM 142 (390)
Q Consensus 135 lrGNHE~~ 142 (390)
|+||||.-
T Consensus 119 IaGNHELt 126 (305)
T KOG3947|consen 119 IAGNHELT 126 (305)
T ss_pred Eeecccee
Confidence 99999975
No 120
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=82.43 E-value=3.1 Score=43.74 Aligned_cols=39 Identities=26% Similarity=0.267 Sum_probs=26.1
Q ss_pred ccEEEEeCCccCCCCCh-----HHHHHHHHHhHHHHhhcCCcEEEEcCCchh
Q 016381 95 ESVLIQLGDVLDRGEDE-----LAILSLLRSLDMQAKAEGGAVFQVNGNHET 141 (390)
Q Consensus 95 ~~~lvfLGD~vDRG~~s-----~evl~~l~~l~~~~~~~g~~v~~lrGNHE~ 141 (390)
+..++..||.+...+.+ ..+++++..+ +--....||||.
T Consensus 50 n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~--------g~Da~~lGNHEF 93 (550)
T TIGR01530 50 NALVLHAGDAIIGTLYFTLFGGRADAALMNAA--------GFDFFTLGNHEF 93 (550)
T ss_pred CeEEEECCCCCCCccchhhcCCHHHHHHHhcc--------CCCEEEeccccc
Confidence 46889999999765433 3345555444 233578999996
No 121
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=81.78 E-value=3.4 Score=37.29 Aligned_cols=75 Identities=23% Similarity=0.223 Sum_probs=40.0
Q ss_pred EEEEccCCCC-----HHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCCh----------HHHHHHHHHhHHH
Q 016381 60 IVAVGDLHGD-----LDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDE----------LAILSLLRSLDMQ 124 (390)
Q Consensus 60 i~vIGDiHG~-----~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s----------~evl~~l~~l~~~ 124 (390)
|++++|+|-. ++.|..+|+.+. .. ...+.+|++|+++|.-... ......+..+...
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~--~~-------~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVE--DA-------SKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSF 71 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCC--HC-------TTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHH
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhcc--cc-------CCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHH
Confidence 5788888876 455566665433 01 1246899999999963211 1223333344433
Q ss_pred Hhh--cCCcEEEEcCCchhhh
Q 016381 125 AKA--EGGAVFQVNGNHETMN 143 (390)
Q Consensus 125 ~~~--~g~~v~~lrGNHE~~~ 143 (390)
+++ ..-+|+++.|+||...
T Consensus 72 ~~~i~~~~~vvlvPg~~D~~~ 92 (209)
T PF04042_consen 72 LESILPSTQVVLVPGPNDPTS 92 (209)
T ss_dssp HCCCHCCSEEEEE--TTCTT-
T ss_pred HhhcccccEEEEeCCCccccc
Confidence 333 2358999999999754
No 122
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=81.08 E-value=2.5 Score=44.46 Aligned_cols=71 Identities=20% Similarity=0.247 Sum_probs=40.7
Q ss_pred eEEEEccCCCCHH----------HHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCCh-----HHHHHHHHHhHH
Q 016381 59 RIVAVGDLHGDLD----------QARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDE-----LAILSLLRSLDM 123 (390)
Q Consensus 59 ~i~vIGDiHG~~~----------~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s-----~evl~~l~~l~~ 123 (390)
.|+-+.|+||.+. .+..++++..-.. +. ..++..++..||++.-.+.+ ..+++++..+
T Consensus 36 til~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~-~~----~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~-- 108 (551)
T PRK09558 36 TILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEV-AA----EGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLI-- 108 (551)
T ss_pred EEEEecccCCCccccccCCccHHHHHHHHHHHHHHh-hc----cCCCEEEEcCCccccceEhhhhcCCchhHHHHhcC--
Confidence 6899999999864 2334444332100 00 02246789999998754332 2344555444
Q ss_pred HHhhcCCcEEEEcCCchhh
Q 016381 124 QAKAEGGAVFQVNGNHETM 142 (390)
Q Consensus 124 ~~~~~g~~v~~lrGNHE~~ 142 (390)
|-.+.. .||||.-
T Consensus 109 -----g~Da~t-lGNHEFD 121 (551)
T PRK09558 109 -----GYDAMA-VGNHEFD 121 (551)
T ss_pred -----CCCEEc-ccccccC
Confidence 345554 5999963
No 123
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=80.00 E-value=2.4 Score=42.41 Aligned_cols=79 Identities=14% Similarity=0.116 Sum_probs=43.2
Q ss_pred CeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhh----cCCcEE
Q 016381 58 RRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKA----EGGAVF 133 (390)
Q Consensus 58 ~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~----~g~~v~ 133 (390)
.+.++|||-=+....-..+-+.++-..++ ..-+.+|-+||-++.|..+..-=.+-.....-|.+ ..-..+
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~------~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy 100 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKN------ERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFF 100 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHh------CCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeE
Confidence 38999999644333222222222211111 12468999999998887754322222222222211 123799
Q ss_pred EEcCCchhh
Q 016381 134 QVNGNHETM 142 (390)
Q Consensus 134 ~lrGNHE~~ 142 (390)
+++||||..
T Consensus 101 ~vLGNHDy~ 109 (394)
T PTZ00422 101 TVLGQADWD 109 (394)
T ss_pred EeCCccccc
Confidence 999999974
No 124
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=77.81 E-value=5.4 Score=39.14 Aligned_cols=79 Identities=25% Similarity=0.307 Sum_probs=47.3
Q ss_pred CeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccC-CCC---ChHHHHHHHHHhHHHHhh------
Q 016381 58 RRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLD-RGE---DELAILSLLRSLDMQAKA------ 127 (390)
Q Consensus 58 ~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vD-RG~---~s~evl~~l~~l~~~~~~------ 127 (390)
|||.|-|=-||+++.+-.-+..+.-.. ...-|.|+++||+=. |.. .++.|=-..+++..-+.=
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~-------~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~ 73 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRG-------NTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIK 73 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcC-------CCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCccc
Confidence 789999999999999875444332110 123689999999853 321 233333333333322211
Q ss_pred cCCcEEEEcCCchhhh
Q 016381 128 EGGAVFQVNGNHETMN 143 (390)
Q Consensus 128 ~g~~v~~lrGNHE~~~ 143 (390)
+|---++|-||||.++
T Consensus 74 APVlTIFIGGNHEAsn 89 (456)
T KOG2863|consen 74 APVLTIFIGGNHEASN 89 (456)
T ss_pred CceeEEEecCchHHHH
Confidence 1224567999999975
No 125
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=77.24 E-value=4.5 Score=44.26 Aligned_cols=67 Identities=25% Similarity=0.292 Sum_probs=42.0
Q ss_pred CeEEEEccCCCCHHH----------------HHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCCh----------
Q 016381 58 RRIVAVGDLHGDLDQ----------------ARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDE---------- 111 (390)
Q Consensus 58 ~~i~vIGDiHG~~~~----------------l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s---------- 111 (390)
-+|+.+.|+||++.. +..+++++.- . ..+..|+-.||++--.+-+
T Consensus 40 L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~---e------~~ntlllD~GD~iqGspl~~~~~~~~~~~ 110 (780)
T PRK09418 40 LRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKARE---E------AKNSVLFDDGDALQGTPLGDYVANKINDP 110 (780)
T ss_pred EEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHH---h------CCCeEEEECCCCCCCchHHHHHhhccccc
Confidence 479999999998632 3444444321 0 1256899999998644332
Q ss_pred ---------HHHHHHHHHhHHHHhhcCCcEEEEcCCchh
Q 016381 112 ---------LAILSLLRSLDMQAKAEGGAVFQVNGNHET 141 (390)
Q Consensus 112 ---------~evl~~l~~l~~~~~~~g~~v~~lrGNHE~ 141 (390)
..+++++-.+. -. ....||||+
T Consensus 111 ~~~~~~~~~~p~i~~mN~lg-------yD-a~tlGNHEF 141 (780)
T PRK09418 111 KKPVDPSYTHPLYRLMNLMK-------YD-VISLGNHEF 141 (780)
T ss_pred ccccccccchHHHHHHhccC-------CC-EEecccccc
Confidence 23555555552 23 478999995
No 126
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=67.25 E-value=22 Score=36.95 Aligned_cols=58 Identities=19% Similarity=0.123 Sum_probs=41.5
Q ss_pred CCeEEEEccCCCC------------HHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhHHH
Q 016381 57 GRRIVAVGDLHGD------------LDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLDMQ 124 (390)
Q Consensus 57 ~~~i~vIGDiHG~------------~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~ 124 (390)
-+||+|-.|+|=. +..|.++|+.+.-. .-|.+++-||++.-..-|..+|.-...+-++
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~----------~VDmiLlGGDLFHeNkPSr~~L~~~i~lLRr 82 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQEN----------DVDMILLGGDLFHENKPSRKTLHRCLELLRR 82 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhc----------CCcEEEecCcccccCCccHHHHHHHHHHHHH
Confidence 4589999999954 46788888866321 2578999999999887777666555444433
No 127
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=61.75 E-value=6.9 Score=32.14 Aligned_cols=27 Identities=22% Similarity=0.364 Sum_probs=19.0
Q ss_pred hhhHhhcCCcEEEeCC-EEEE-ecCCCCC
Q 016381 223 MACELARHGVVLKVND-WVFC-HGGLLPH 249 (390)
Q Consensus 223 ~~~~l~~lP~~~~i~~-~lfv-HgGi~p~ 249 (390)
...+|+.+|+...+.+ .+++ |++++|.
T Consensus 29 ~~~~~~~lp~~~~~~~~~~~~~~~~~~~~ 57 (155)
T COG0639 29 GLETFDSLPLAAVAEGGKLLCHHGGLSPG 57 (155)
T ss_pred hhhHHHhhhHHHHhcCCceeeecCCCCcc
Confidence 4677888888877765 6665 6666663
No 128
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=56.70 E-value=2.6 Score=42.81 Aligned_cols=91 Identities=13% Similarity=0.005 Sum_probs=67.9
Q ss_pred ecCCCCccccCCC---CeEEEEccCCCCHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHh
Q 016381 45 VSGNTPTFVSAPG---RRIVAVGDLHGDLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSL 121 (390)
Q Consensus 45 ~~~~~p~~~~~~~---~~i~vIGDiHG~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l 121 (390)
....+|+....-+ --.+.++|.||.+.++..+++.- + ...-.+++-|++++++....+.+..+...
T Consensus 30 aI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P---------~~~K~Y~rrg~a~m~l~~~~~A~~~l~~~ 98 (476)
T KOG0376|consen 30 AIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--P---------TYIKAYVRRGTAVMALGEFKKALLDLEKV 98 (476)
T ss_pred HHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--c---------hhhheeeeccHHHHhHHHHHHHHHHHHHh
Confidence 3345555433322 24789999999999999998852 1 11347999999999999999999999988
Q ss_pred HHHHhhcCCcEEEEcCCchhhhcccccc
Q 016381 122 DMQAKAEGGAVFQVNGNHETMNVEGDFR 149 (390)
Q Consensus 122 ~~~~~~~g~~v~~lrGNHE~~~l~~~~~ 149 (390)
+...|+ +..+.|++||...+-...+
T Consensus 99 ~~l~Pn---d~~~~r~~~Ec~~~vs~~~ 123 (476)
T KOG0376|consen 99 KKLAPN---DPDATRKIDECNKIVSEEK 123 (476)
T ss_pred hhcCcC---cHHHHHHHHHHHHHHHHHh
Confidence 888765 8889999999865544333
No 129
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=52.21 E-value=53 Score=31.56 Aligned_cols=82 Identities=13% Similarity=0.032 Sum_probs=46.5
Q ss_pred CeEEEEccCCCCHHHHHHHHHHc--CCCCCCCCCCcCCCccEEEEeCCccCCC----CCh----HHHHHHHHH-hHHHHh
Q 016381 58 RRIVAVGDLHGDLDQARCALEMA--GVLSSDGLDLWTGGESVLIQLGDVLDRG----EDE----LAILSLLRS-LDMQAK 126 (390)
Q Consensus 58 ~~i~vIGDiHG~~~~l~~lL~~~--g~~~~d~~~~w~~~~~~lvfLGD~vDRG----~~s----~evl~~l~~-l~~~~~ 126 (390)
.+++|+||||=+-...+..|+++ |+.....+ ......+|++|+++-+. .++ .+-.+.+.. +..++|
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~---~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp 104 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPE---NELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFK 104 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcc---cCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhCh
Confidence 47999999998854444444332 22110000 01145899999999773 222 233444443 233344
Q ss_pred h--cCCcEEEEcCCchhh
Q 016381 127 A--EGGAVFQVNGNHETM 142 (390)
Q Consensus 127 ~--~g~~v~~lrGNHE~~ 142 (390)
. ...++++|+|-.|-.
T Consensus 105 ~L~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 105 LILEHCYLIFIPGINDPC 122 (291)
T ss_pred HHHhcCeEEEECCCCCCC
Confidence 2 245899999999964
No 130
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=51.34 E-value=13 Score=39.18 Aligned_cols=42 Identities=29% Similarity=0.351 Sum_probs=36.9
Q ss_pred ccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCcEEEEcCCchhhhc
Q 016381 95 ESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGAVFQVNGNHETMNV 144 (390)
Q Consensus 95 ~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~v~~lrGNHE~~~l 144 (390)
-|+|-++||+.||||.+-.+++.|+... .|-+.=||||...+
T Consensus 185 VDhLHIvGDIyDRGp~pd~ImD~Lm~~h--------svDIQWGNHDIlWM 226 (640)
T PF06874_consen 185 VDHLHIVGDIYDRGPRPDKIMDRLMNYH--------SVDIQWGNHDILWM 226 (640)
T ss_pred hhheeecccccCCCCChhHHHHHHhcCC--------CccccccchHHHHH
Confidence 4689999999999999999999999873 68889999997544
No 131
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=43.21 E-value=26 Score=32.45 Aligned_cols=48 Identities=33% Similarity=0.329 Sum_probs=26.6
Q ss_pred ccEEEEeCCcc-CCCCC---hHHHHHHHHHhHHHHhh----cCCcEEEEcCCchhh
Q 016381 95 ESVLIQLGDVL-DRGED---ELAILSLLRSLDMQAKA----EGGAVFQVNGNHETM 142 (390)
Q Consensus 95 ~~~lvfLGD~v-DRG~~---s~evl~~l~~l~~~~~~----~g~~v~~lrGNHE~~ 142 (390)
.+..+||||-. ||-.. ..=+|.+|.++...-.. -..+|++|.||||..
T Consensus 85 itpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein 140 (318)
T PF13258_consen 85 ITPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEIN 140 (318)
T ss_pred cccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceec
Confidence 34678999977 34211 12334444444321000 123899999999975
No 132
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=40.89 E-value=91 Score=29.26 Aligned_cols=68 Identities=22% Similarity=0.181 Sum_probs=42.6
Q ss_pred CeEEEEccCCCCH--HHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCCCC-hHHHHHHHHHhHHHHhhcCCcEEE
Q 016381 58 RRIVAVGDLHGDL--DQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRGED-ELAILSLLRSLDMQAKAEGGAVFQ 134 (390)
Q Consensus 58 ~~i~vIGDiHG~~--~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~-s~evl~~l~~l~~~~~~~g~~v~~ 134 (390)
||+++||||=|.. ..+..-|..+.- + ..-|.+|..|--.--|-. ..++...+.+. |-+ ++
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~---k------yk~dfvI~N~ENaa~G~Git~k~y~~l~~~-------G~d-vi 63 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKS---K------YKIDFVIVNGENAAGGFGITEKIYKELLEA-------GAD-VI 63 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHH---h------hcCcEEEEcCccccCCcCCCHHHHHHHHHh-------CCC-EE
Confidence 7899999999985 444444443311 1 124678888877765543 45566555544 445 46
Q ss_pred EcCCchhh
Q 016381 135 VNGNHETM 142 (390)
Q Consensus 135 lrGNHE~~ 142 (390)
-+|||-.-
T Consensus 64 T~GNH~wd 71 (266)
T COG1692 64 TLGNHTWD 71 (266)
T ss_pred eccccccc
Confidence 89999754
No 133
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=39.77 E-value=34 Score=27.88 Aligned_cols=24 Identities=21% Similarity=0.361 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHhCCcEEEEccccC
Q 016381 310 INAVLQDTLRAVGAKAMVVGHTPQ 333 (390)
Q Consensus 310 ~~~~~~~~l~~~~~~~iV~GHt~~ 333 (390)
..+.+...++..+++.++.||++.
T Consensus 176 ~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 176 GREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSSS
T ss_pred cHHHHHHHHhhCCCCEEEeCceec
Confidence 456778888999999999999986
No 134
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=37.68 E-value=1e+02 Score=32.49 Aligned_cols=67 Identities=25% Similarity=0.180 Sum_probs=41.4
Q ss_pred HHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCcc--CCCCChH----HHHHHHHHhHHHHhhcCCcEEEEcCCchhhh
Q 016381 70 LDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVL--DRGEDEL----AILSLLRSLDMQAKAEGGAVFQVNGNHETMN 143 (390)
Q Consensus 70 ~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~v--DRG~~s~----evl~~l~~l~~~~~~~g~~v~~lrGNHE~~~ 143 (390)
...+..+|+.++-... .-|.++..||++ |+++.+. +++..+.++..++- .+-.|+...||||..-
T Consensus 194 ~~lies~L~~ike~~~--------~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~F-pdvpvypalGNhe~~P 264 (577)
T KOG3770|consen 194 KRLIESALDHIKENHK--------DIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYF-PDVPVYPALGNHEIHP 264 (577)
T ss_pred HHHHHHHHHHHHhcCC--------CCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhC-CCCceeeecccCCCCc
Confidence 4566778877654321 257999999999 4566543 33333333333322 1457899999999864
Q ss_pred cc
Q 016381 144 VE 145 (390)
Q Consensus 144 l~ 145 (390)
.+
T Consensus 265 ~N 266 (577)
T KOG3770|consen 265 VN 266 (577)
T ss_pred Hh
Confidence 43
No 135
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=36.27 E-value=1.9e+02 Score=26.93 Aligned_cols=70 Identities=26% Similarity=0.336 Sum_probs=39.1
Q ss_pred eEEEEccCCCC--H--HHHHHH-HHHcCCCCCCCCCCcCCCccEEEEeCCcc-CCCCChH------HHHHHHHHhHHHHh
Q 016381 59 RIVAVGDLHGD--L--DQARCA-LEMAGVLSSDGLDLWTGGESVLIQLGDVL-DRGEDEL------AILSLLRSLDMQAK 126 (390)
Q Consensus 59 ~i~vIGDiHG~--~--~~l~~l-L~~~g~~~~d~~~~w~~~~~~lvfLGD~v-DRG~~s~------evl~~l~~l~~~~~ 126 (390)
+++++||.=.. . ..+... .+.+.- ...+.+|++||++ +-|..+. +.+..++....
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~----------~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~--- 68 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAE----------LGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPS--- 68 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHh----------cCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchh---
Confidence 68899998764 1 223332 332211 1246899999997 5554221 22222222110
Q ss_pred hcCCcEEEEcCCchhh
Q 016381 127 AEGGAVFQVNGNHETM 142 (390)
Q Consensus 127 ~~g~~v~~lrGNHE~~ 142 (390)
.+..++.++||||..
T Consensus 69 -~~~P~~~v~GNHD~~ 83 (277)
T cd07378 69 -LQVPWYLVLGNHDYS 83 (277)
T ss_pred -hcCCeEEecCCcccC
Confidence 234799999999975
No 136
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=35.67 E-value=59 Score=29.88 Aligned_cols=26 Identities=15% Similarity=0.100 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHhCCcEEEEccccCCC
Q 016381 310 INAVLQDTLRAVGAKAMVVGHTPQFA 335 (390)
Q Consensus 310 ~~~~~~~~l~~~~~~~iV~GHt~~~~ 335 (390)
+...+.++++..+++.+|+||++...
T Consensus 197 ~s~~l~~li~~~~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 197 GSQHFGQLLVKYEIKDVIFGHLHRRF 222 (239)
T ss_pred ChHHHHHHHHHhCCCEEEECCccCCC
Confidence 55778888888899999999999964
No 137
>PRK10413 hydrogenase 2 accessory protein HypG; Provisional
Probab=31.04 E-value=27 Score=26.90 Aligned_cols=14 Identities=29% Similarity=0.636 Sum_probs=11.8
Q ss_pred EEeCCEEEEecCCC
Q 016381 234 LKVNDWVFCHGGLL 247 (390)
Q Consensus 234 ~~i~~~lfvHgGi~ 247 (390)
..+|+|++||+|..
T Consensus 43 ~~vGDyVLVHaGfA 56 (82)
T PRK10413 43 DLLGQWVLVHVGFA 56 (82)
T ss_pred cccCCEEEEecchh
Confidence 46799999999973
No 138
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=30.28 E-value=23 Score=26.16 Aligned_cols=13 Identities=46% Similarity=0.976 Sum_probs=9.8
Q ss_pred EEeCCEEEEecCC
Q 016381 234 LKVNDWVFCHGGL 246 (390)
Q Consensus 234 ~~i~~~lfvHgGi 246 (390)
..+|+|++||+|.
T Consensus 38 v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 38 VKVGDYVLVHAGF 50 (68)
T ss_dssp B-TT-EEEEETTE
T ss_pred CCCCCEEEEecCh
Confidence 5679999999996
No 139
>PRK10409 hydrogenase assembly chaperone; Provisional
Probab=29.99 E-value=26 Score=27.50 Aligned_cols=14 Identities=36% Similarity=0.828 Sum_probs=11.8
Q ss_pred EEeCCEEEEecCCC
Q 016381 234 LKVNDWVFCHGGLL 247 (390)
Q Consensus 234 ~~i~~~lfvHgGi~ 247 (390)
..+|+|++||+|..
T Consensus 42 ~~vGDyVLVHaGfA 55 (90)
T PRK10409 42 PRVGQWVLVHVGFA 55 (90)
T ss_pred cCCCCEEEEecChH
Confidence 46799999999963
No 140
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=26.43 E-value=53 Score=28.08 Aligned_cols=25 Identities=24% Similarity=0.118 Sum_probs=19.3
Q ss_pred HHHHHHHHHhCCcEEEEccccCCCC
Q 016381 312 AVLQDTLRAVGAKAMVVGHTPQFAG 336 (390)
Q Consensus 312 ~~~~~~l~~~~~~~iV~GHt~~~~G 336 (390)
+.+.+.++..+++.+|+||+++..+
T Consensus 127 ~~l~~~~~~~~v~~~i~GH~H~~~~ 151 (166)
T cd07404 127 VDLDDLILADPIDLWIHGHTHFNFD 151 (166)
T ss_pred hccHhHHhhcCCCEEEECCccccce
Confidence 3455666777899999999999753
No 141
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=25.77 E-value=31 Score=35.11 Aligned_cols=48 Identities=27% Similarity=0.399 Sum_probs=37.0
Q ss_pred hhHHHHHHHHHHhCCc----EEEEccccCCC--Cce-eeeCCeEEEEEecCCCCc
Q 016381 309 QINAVLQDTLRAVGAK----AMVVGHTPQFA--GAN-CEYNCSIWRIDVGMSSGV 356 (390)
Q Consensus 309 ~~~~~~~~~l~~~~~~----~iV~GHt~~~~--G~~-~~~~~~~i~IDtG~~~g~ 356 (390)
...+...+.|+.+|.+ .||.||||+.. |-+ ...+++++.||.|.+..+
T Consensus 513 ede~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFskAY 567 (648)
T COG3855 513 EDEEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSKAY 567 (648)
T ss_pred chHHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhhhh
Confidence 3456667788887766 89999999976 322 346899999999999865
No 142
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=25.49 E-value=1.2e+02 Score=23.57 Aligned_cols=26 Identities=23% Similarity=0.420 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhCCcEEEEccccCCCC
Q 016381 311 NAVLQDTLRAVGAKAMVVGHTPQFAG 336 (390)
Q Consensus 311 ~~~~~~~l~~~~~~~iV~GHt~~~~G 336 (390)
...+...+...+.+.+|.||++....
T Consensus 92 ~~~~~~~~~~~~~~~~~~GH~H~~~~ 117 (131)
T cd00838 92 SEALLELLEKYGVDLVLSGHTHVYER 117 (131)
T ss_pred HHHHHHHHHHhCCCEEEeCCeecccc
Confidence 34566677778999999999998653
No 143
>COG3792 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.62 E-value=9.1 Score=31.58 Aligned_cols=29 Identities=38% Similarity=0.610 Sum_probs=20.3
Q ss_pred EccCCC------CHHHHHHHHHHcCCCCCCCCCCcCCCccEEEEeCCccCCC
Q 016381 63 VGDLHG------DLDQARCALEMAGVLSSDGLDLWTGGESVLIQLGDVLDRG 108 (390)
Q Consensus 63 IGDiHG------~~~~l~~lL~~~g~~~~d~~~~w~~~~~~lvfLGD~vDRG 108 (390)
|||.|| +.+.+...++ +.++.+||+.|+|
T Consensus 26 i~~~~g~~~~~~d~dsfeE~kn-----------------df~~ll~~lld~G 60 (122)
T COG3792 26 IGDAYGLSSGQRDPDSFEERKN-----------------DFFFLLGDLLDEG 60 (122)
T ss_pred HHHHhCCccccCChhhHHHHHH-----------------HHHHHHHHHhcCC
Confidence 567777 6666666665 3578888888874
No 144
>TIGR00074 hypC_hupF hydrogenase assembly chaperone HypC/HupF. An additional proposed function is to shuttle the iron atom that has been liganded at the HypC/HypD complex to the precursor of the large hydrogenase (HycE) subunit. PubMed:12441107.
Probab=23.35 E-value=47 Score=25.14 Aligned_cols=13 Identities=46% Similarity=0.879 Sum_probs=11.1
Q ss_pred EEeCCEEEEecCC
Q 016381 234 LKVNDWVFCHGGL 246 (390)
Q Consensus 234 ~~i~~~lfvHgGi 246 (390)
..+|+|++||+|.
T Consensus 36 ~~vGD~VLVH~G~ 48 (76)
T TIGR00074 36 VKVGDYVLVHVGF 48 (76)
T ss_pred CCCCCEEEEecCh
Confidence 3568999999996
No 145
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=23.02 E-value=2.8e+02 Score=28.79 Aligned_cols=66 Identities=18% Similarity=0.294 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHh-CCcEEEEccccCCCCceee-------eCCeEEEEEecCCCCccCCCceEEEEeCC---eEEEEecC
Q 016381 310 INAVLQDTLRAV-GAKAMVVGHTPQFAGANCE-------YNCSIWRIDVGMSSGVLNSRPEVLEITDN---KARVISGK 377 (390)
Q Consensus 310 ~~~~~~~~l~~~-~~~~iV~GHt~~~~G~~~~-------~~~~~i~IDtG~~~g~~~g~~~~L~i~~~---~~~~~~~~ 377 (390)
..+.+.+.|+.+ +++.+++||.++.. +... -+...|-|-|++-.. +=-..-++||..+ .+.+++-.
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~-i~~~~~~~~~~p~~gfweI~TaSlvd-fPq~~Ri~Ei~~n~dgt~si~tt~ 443 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNK-ITAHRRVEGVGKDKGFWEINTASHID-FPQQGRIIELADNQDGTVSIFTTL 443 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCc-cccccCCCCCCCcCCeEEEecccccc-CCCCceEEEEEeCCCCcEEEEEEe
Confidence 345678888887 79999999999865 2211 123689998865543 2234577888643 45555533
No 146
>PF06490 FleQ: Flagellar regulatory protein FleQ; InterPro: IPR010518 This domain is found at the N terminus of a subset of sigma54-dependent transcriptional activators that are involved in regulation of flagellar motility e.g. FleQ in Pseudomonas aeruginosa. It is clearly related to IPR001789 from INTERPRO, but lacks the conserved aspartate residue that undergoes phosphorylation in the classic two-component system response regulator (IPR001789 from INTERPRO).
Probab=21.18 E-value=1.2e+02 Score=24.42 Aligned_cols=74 Identities=20% Similarity=0.258 Sum_probs=46.5
Q ss_pred eEEEEccCCCCHHHHHHHHHHcCCCCCC-CCCCc-----C-CCccEEEEeCCccCCCCChHHHHHHHHHhHHHHhhcCCc
Q 016381 59 RIVAVGDLHGDLDQARCALEMAGVLSSD-GLDLW-----T-GGESVLIQLGDVLDRGEDELAILSLLRSLDMQAKAEGGA 131 (390)
Q Consensus 59 ~i~vIGDiHG~~~~l~~lL~~~g~~~~d-~~~~w-----~-~~~~~lvfLGD~vDRG~~s~evl~~l~~l~~~~~~~g~~ 131 (390)
||+||.|=-.+...|..+|+-+|....- ....| . .....+|.+|+.- +....+..+..++|. -
T Consensus 1 kILvIddd~~R~~~L~~ILeFlGe~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~-------~~~~~l~~l~~~~~~---~ 70 (109)
T PF06490_consen 1 KILVIDDDAERRQRLSTILEFLGEQCEAVSSSDWSQADWSSPWEACAVILGSCS-------KLAELLKELLKWAPH---I 70 (109)
T ss_pred CEEEECCcHHHHHhhhhhhhhcCCCeEEecHHHHHHhhhhcCCcEEEEEecCch-------hHHHHHHHHHhhCCC---C
Confidence 5788888888888999999977753210 01122 1 2244667777764 555556666665543 4
Q ss_pred EEEEcCCchhh
Q 016381 132 VFQVNGNHETM 142 (390)
Q Consensus 132 v~~lrGNHE~~ 142 (390)
=+++.|+++..
T Consensus 71 Pvlllg~~~~~ 81 (109)
T PF06490_consen 71 PVLLLGEHDSP 81 (109)
T ss_pred CEEEECCCCcc
Confidence 46788888765
No 147
>KOG3818 consensus DNA polymerase epsilon, subunit B [Replication, recombination and repair]
Probab=20.47 E-value=5.1e+02 Score=26.57 Aligned_cols=79 Identities=19% Similarity=0.141 Sum_probs=48.3
Q ss_pred CCCeEEEEccCCCCHHHHHHHHHHc--CCCCCCCCCCcCCCccEEEEeCCccCCCCChHHHHH---HHHHhHHHH----h
Q 016381 56 PGRRIVAVGDLHGDLDQARCALEMA--GVLSSDGLDLWTGGESVLIQLGDVLDRGEDELAILS---LLRSLDMQA----K 126 (390)
Q Consensus 56 ~~~~i~vIGDiHG~~~~l~~lL~~~--g~~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~---~l~~l~~~~----~ 126 (390)
.+..+++++|+|-+-...+..|+++ |+.+ .....+|+.|.+..+--+.-++.. -+..|.... +
T Consensus 281 ~d~~fVfLSdV~LD~~~vm~aL~kifqgy~~--------~pP~~iIlcG~FtS~p~~~~s~~~~k~~f~~LA~~l~~~~~ 352 (525)
T KOG3818|consen 281 TDTSFVFLSDVFLDDKKVMEALRKIFQGYKD--------APPTAIILCGSFTSSPRQTSSSDQLKDGFRWLAAQLTCFRK 352 (525)
T ss_pred cCceEEEEehhccccHHHHHHHHHHHhhccC--------CCCeEEEEeccccccccccchHHHHHHHHHHHHhhcccccc
Confidence 3447899999999988888877765 4432 235689999999876432222222 222222211 0
Q ss_pred h-cCCcEEEEcCCchhh
Q 016381 127 A-EGGAVFQVNGNHETM 142 (390)
Q Consensus 127 ~-~g~~v~~lrGNHE~~ 142 (390)
. ...++++|+|-.|-.
T Consensus 353 ~~ekT~fIFVPGP~Dp~ 369 (525)
T KOG3818|consen 353 DYEKTQFIFVPGPNDPW 369 (525)
T ss_pred ccccceEEEecCCCCCC
Confidence 0 123678888887764
No 148
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=20.22 E-value=1.4e+02 Score=25.86 Aligned_cols=60 Identities=22% Similarity=0.268 Sum_probs=37.2
Q ss_pred EEccCCCCHHHHHHHH-HHcCC---CCCCCCCCcCCCccEEEEeCCccCCCCChHHHHHHHHHhH
Q 016381 62 AVGDLHGDLDQARCAL-EMAGV---LSSDGLDLWTGGESVLIQLGDVLDRGEDELAILSLLRSLD 122 (390)
Q Consensus 62 vIGDiHG~~~~l~~lL-~~~g~---~~~d~~~~w~~~~~~lvfLGD~vDRG~~s~evl~~l~~l~ 122 (390)
+.+=.+|+-..+...+ +.++- ..-+.... .....-+||+|=.+|+|.-..++.++|..|+
T Consensus 3 vYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~-~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~ 66 (160)
T PF12641_consen 3 VYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPE-DLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK 66 (160)
T ss_pred EEECCCChHHHHHHHHHHHCCCceeEecccccc-CCCCCCEEEEEcCccCCCCCHHHHHHHHHcc
Confidence 3444577777775544 33332 00000000 0123458999999999999999999999985
Done!