Query 016385
Match_columns 390
No_of_seqs 328 out of 1981
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 12:42:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016385.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016385hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wfj_A Putative elicitor-respo 99.9 8E-22 2.7E-26 162.7 14.9 122 259-390 7-132 (136)
2 2dmh_A Myoferlin; beta-sandwic 99.9 2.5E-21 8.6E-26 160.5 16.7 126 259-389 4-134 (140)
3 1rlw_A Phospholipase A2, CALB 99.9 3E-21 1E-25 157.1 15.3 116 261-385 2-120 (126)
4 3b7y_A E3 ubiquitin-protein li 99.9 2.6E-21 9E-26 162.9 15.3 127 258-388 16-153 (153)
5 3kwu_A MUNC13-1; calcium bindi 99.8 3.4E-20 1.2E-24 155.2 17.4 118 259-385 14-142 (148)
6 2ep6_A MCTP2 protein; beta san 99.8 6.2E-21 2.1E-25 156.8 12.5 119 258-385 9-127 (133)
7 3m7f_B E3 ubiquitin-protein li 99.8 2.4E-20 8.2E-25 160.9 16.3 127 259-389 5-142 (176)
8 2fk9_A Protein kinase C, ETA t 99.8 5.4E-21 1.8E-25 160.7 11.6 113 259-385 26-152 (157)
9 1gmi_A Protein kinase C, epsil 99.8 2E-20 6.8E-25 154.4 13.3 115 260-388 4-133 (136)
10 3f04_A Synaptotagmin-1; C2A, c 99.8 3.9E-20 1.4E-24 153.9 13.2 110 259-368 31-142 (143)
11 2d8k_A Synaptotagmin VII; exoc 99.8 3.3E-20 1.1E-24 154.0 12.7 111 259-369 23-136 (141)
12 1rsy_A Synaptotagmin I; calciu 99.8 6.1E-20 2.1E-24 154.4 13.8 110 259-368 39-150 (152)
13 3pyc_A E3 ubiquitin-protein li 99.8 8.4E-20 2.9E-24 149.8 14.1 121 261-385 4-128 (132)
14 2b3r_A Phosphatidylinositol-4- 99.8 1.1E-19 3.6E-24 149.6 14.1 109 259-368 17-130 (134)
15 2z0u_A WW domain-containing pr 99.8 2.1E-20 7.1E-25 157.6 8.6 109 259-367 40-154 (155)
16 2nq3_A Itchy homolog E3 ubiqui 99.8 3.4E-19 1.1E-23 152.9 16.1 124 259-390 33-163 (173)
17 2bwq_A Regulating synaptic mem 99.8 3.8E-19 1.3E-23 145.1 11.9 108 259-367 15-129 (129)
18 1ugk_A Synaptotagmin IV, KIAA1 99.8 7.9E-19 2.7E-23 145.1 13.9 110 259-368 19-133 (138)
19 3fdw_A Synaptotagmin-like prot 99.8 2E-19 6.8E-24 150.5 10.0 111 259-369 20-135 (148)
20 2r83_A Synaptotagmin-1; C2A-C2 99.8 1.6E-18 5.6E-23 160.8 16.5 128 259-388 16-147 (284)
21 1wfm_A Synaptotagmin XIII; C2 99.8 5.3E-19 1.8E-23 146.2 11.8 107 259-368 23-132 (138)
22 3rdl_A Protein kinase C alpha 99.8 6.5E-19 2.2E-23 145.3 12.1 109 260-369 14-125 (137)
23 2dmg_A KIAA1228 protein; beta- 99.8 3.1E-19 1.1E-23 148.2 10.0 110 259-369 21-136 (142)
24 1a25_A CALB, protein kinase C 99.8 1.1E-18 3.7E-23 146.2 13.3 108 260-368 29-139 (149)
25 2chd_A Rabphilin-3A, exophilin 99.8 9.3E-19 3.2E-23 145.4 12.7 110 259-368 26-140 (142)
26 2enp_A B/K protein; C2 type 1, 99.8 2.9E-19 9.8E-24 149.4 9.1 110 259-368 23-141 (147)
27 2q3x_A Regulating synaptic mem 99.8 9.1E-19 3.1E-23 150.2 11.8 110 260-370 28-141 (171)
28 1v27_A Regulating synaptic mem 99.8 4.5E-19 1.5E-23 147.0 9.5 110 259-369 18-134 (141)
29 1rh8_A Piccolo protein; beta-s 99.8 1.9E-19 6.5E-24 149.5 7.1 108 261-368 17-138 (142)
30 3fbk_A RGS3, RGP3, regulator o 99.8 2.6E-18 8.7E-23 144.6 13.5 110 259-369 24-138 (153)
31 1tjx_A Similar to synaptotagmi 99.8 4.8E-18 1.6E-22 143.8 13.7 111 259-369 22-148 (159)
32 3n5a_A Synaptotagmin-7; calciu 99.8 4.7E-18 1.6E-22 140.2 12.1 96 259-354 13-112 (138)
33 2cm5_A Rabphilin-3A; protein t 99.8 1.3E-17 4.4E-22 142.2 14.3 110 259-368 34-159 (166)
34 1w15_A Synaptotagmin IV; metal 99.7 1.2E-17 4E-22 140.5 12.8 107 259-367 27-137 (153)
35 1dqv_A Synaptotagmin III; beta 99.7 2.4E-17 8.3E-22 153.9 12.8 127 259-388 17-149 (296)
36 3nsj_A Perforin-1; pore formin 99.7 2.7E-16 9.4E-21 156.8 19.9 172 194-386 306-500 (540)
37 3jzy_A Intersectin 2; C2 domai 99.7 5.8E-17 2E-21 162.6 13.1 116 259-385 384-503 (510)
38 2cjt_A UNC-13 homolog A, MUNC1 99.7 4.3E-16 1.5E-20 127.3 12.7 99 260-368 3-104 (131)
39 3l9b_A Otoferlin; C2-domain, b 99.7 8.3E-16 2.8E-20 124.3 12.9 119 260-390 19-142 (144)
40 1cjy_A CPLA2, protein (cytosol 99.6 3.4E-16 1.2E-20 160.7 10.4 111 258-369 14-127 (749)
41 2cjs_A UNC-13 homolog A, MUNC1 99.6 3.2E-15 1.1E-19 127.1 13.4 88 259-356 11-99 (167)
42 2r83_A Synaptotagmin-1; C2A-C2 99.6 2.6E-15 8.8E-20 139.1 14.0 111 259-369 147-273 (284)
43 1djx_A PLC-D1, phosphoinositid 99.6 4.9E-14 1.7E-18 143.5 16.4 120 260-385 495-619 (624)
44 1dqv_A Synaptotagmin III; beta 99.5 1.7E-15 5.9E-20 141.3 3.4 111 259-369 149-276 (296)
45 3bxj_A RAS GTPase-activating p 99.5 1.4E-15 4.8E-20 151.0 -0.2 103 258-368 7-116 (483)
46 3pfq_A PKC-B, PKC-beta, protei 99.4 1.2E-12 4E-17 135.5 10.5 109 260-369 170-281 (674)
47 3ohm_B 1-phosphatidylinositol- 99.2 8.9E-11 3E-15 122.6 12.4 111 261-385 724-840 (885)
48 3qr0_A Phospholipase C-beta (P 99.2 1.3E-10 4.3E-15 120.8 13.1 97 261-368 649-752 (816)
49 2zkm_X 1-phosphatidylinositol- 99.2 2.2E-10 7.5E-15 119.5 14.2 98 260-368 676-780 (799)
50 1yrk_A NPKC-delta, protein kin 99.0 6.7E-09 2.3E-13 81.4 12.6 110 260-385 4-120 (126)
51 2enj_A NPKC-theta, protein kin 98.9 1.1E-08 3.7E-13 81.3 9.6 110 260-385 8-125 (138)
52 3l4c_A Dedicator of cytokinesi 94.4 0.83 2.8E-05 39.4 12.9 56 297-352 77-138 (220)
53 2yrb_A Protein fantom; beta sa 91.1 1.8 6.3E-05 35.1 9.8 121 259-385 15-145 (156)
54 2wxf_A Phosphatidylinositol-4, 87.1 3.8 0.00013 43.3 11.3 92 260-354 215-324 (940)
55 3hhm_A Phosphatidylinositol-4, 82.0 12 0.00041 40.0 12.4 93 260-354 353-455 (1091)
56 1e7u_A Phosphatidylinositol 3- 71.3 18 0.00063 38.2 10.2 93 261-354 217-330 (961)
57 2y3a_A Phosphatidylinositol-4, 68.7 6.9 0.00024 42.0 6.3 92 260-354 351-470 (1092)
58 2k1k_A Ephrin type-A receptor 63.5 2.1 7.1E-05 25.8 0.7 20 4-23 13-32 (38)
59 2ks1_B Epidermal growth factor 53.9 3.1 0.0001 26.0 0.2 11 6-16 16-26 (44)
60 2jwa_A Receptor tyrosine-prote 48.5 3.5 0.00012 25.7 -0.1 8 5-12 15-22 (44)
61 2l2t_A Receptor tyrosine-prote 46.7 3.9 0.00013 25.5 -0.1 7 7-13 16-22 (44)
62 1ewf_A BPI, bactericidal/perme 46.4 1.9E+02 0.0067 27.2 13.4 20 164-183 103-122 (456)
63 2klu_A T-cell surface glycopro 23.2 22 0.00074 24.0 0.5 14 7-20 12-25 (70)
64 2k9j_B Integrin beta-3; transm 22.2 43 0.0015 20.5 1.7 20 4-23 13-33 (43)
65 1q90_G Cytochrome B6F complex 21.6 32 0.0011 20.2 0.9 17 3-19 5-25 (37)
66 1vf5_G Protein PET G; photosyn 20.5 34 0.0012 20.1 0.9 17 3-19 5-25 (37)
No 1
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.88 E-value=8e-22 Score=162.72 Aligned_cols=122 Identities=34% Similarity=0.589 Sum_probs=109.1
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCCceEeeeccC-CCCCCeeeeEEEEEEecCCCCEEEEEEEEcCC
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTIN-NDLNPIWNEHFEFIVEDESTQHLVVRIYDDEG 337 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~-~~~nP~w~e~f~f~v~~~~~~~L~v~v~d~d~ 337 (390)
.+.|.|+|+|++|++|+..+..+.+||||++++. .+.++|++++ ++.||.|||+|.|.+.+ ..+.|.|+|||++.
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~---~~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~~ 82 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCR---TQDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKDV 82 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESS---SCEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSSS
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEEC---CccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECCC
Confidence 5889999999999999999988999999999987 4568999998 89999999999999987 46799999999999
Q ss_pred CCCCceeEEEEEEcccc-CCCceeeEEEEcccccccCCCCeeeeEEEEE--EeecC
Q 016385 338 IQSSELIGCAQVRLCEL-EPGKVKDVWLKLVKDLDVQRDTKYRGQVRIK--YPPYK 390 (390)
Q Consensus 338 ~~~d~~lG~~~v~l~~l-~~~~~~~~w~~L~~~~~~~~~~~~~G~i~l~--y~p~~ 390 (390)
+++|++||++.+++.++ ..+...+.|++|.+ +++..|+|+++ |.|..
T Consensus 83 ~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~------~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 83 GTEDDAVGEATIPLEPVFVEGSIPPTAYNVVK------DEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp CTTTCCSEEEEEESHHHHHHSEEEEEEEEEEE------TTEEEEEEEEEEEEEECC
T ss_pred CCCCceEEEEEEEHHHhccCCCCCcEEEEeec------CCccCEEEEEEEEEEeCC
Confidence 99999999999999998 55666789999972 56789999999 98863
No 2
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=2.5e-21 Score=160.54 Aligned_cols=126 Identities=29% Similarity=0.490 Sum_probs=107.6
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCCceEeeeccCCCCCCeeeeEEEEEEecC---CCCEEEEEEEEc
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE---STQHLVVRIYDD 335 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~~~nP~w~e~f~f~v~~~---~~~~L~v~v~d~ 335 (390)
...|.|+|+|++|++|+..+. +.+||||++++. .++++|+++++++||.|||+|.|.+..+ ....|.|+|||+
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~ 79 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFK---DEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDF 79 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECS---SCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEET
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEEC---CEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEEC
Confidence 467899999999999999998 999999999997 5679999999999999999999999754 457999999999
Q ss_pred CCCCCCceeEEEEEEccccCCCceeeEEEEcccccccCCCCeeeeEEEEE--Eeec
Q 016385 336 EGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVRIK--YPPY 389 (390)
Q Consensus 336 d~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~i~l~--y~p~ 389 (390)
|..++|++||++.+++.++..+...+.|+++.+-.. .++....|+|+++ |.|-
T Consensus 80 d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~-~~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 80 ETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLN-EKGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp TCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEEC-TTCCEEEEEEEEEEEECCC
T ss_pred CCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccC-CCCCCCCCEEEEEEEEECC
Confidence 999999999999999999988888899998332111 1234567999998 8773
No 3
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.87 E-value=3e-21 Score=157.07 Aligned_cols=116 Identities=27% Similarity=0.540 Sum_probs=103.1
Q ss_pred eeEEEEEEeeecCCcc---ccCCCCCCcEEEEEEecCCCceEeeeccCCCCCCeeeeEEEEEEecCCCCEEEEEEEEcCC
Q 016385 261 VGTLEVKLVQAKGLTN---KDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEG 337 (390)
Q Consensus 261 ~g~L~V~v~~a~~L~~---~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~~~nP~w~e~f~f~v~~~~~~~L~v~v~d~d~ 337 (390)
.|.|+|+|++|++|+. .+..|.+||||++++.+.+.+.++|+++++++||.|||+|.|.+.......|.++|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 5899999999999998 4667899999999998554578999999999999999999999976777899999999998
Q ss_pred CCCCceeEEEEEEccccCCCceeeEEEEcccccccCCCCeeeeEEEEE
Q 016385 338 IQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVRIK 385 (390)
Q Consensus 338 ~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~i~l~ 385 (390)
. +|++||++.+++.++..+...+.|++|.+ ...|+|+++
T Consensus 82 ~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~~--------~~~g~i~~~ 120 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMKVGEKKEVPFIFNQ--------VTEMVLEMS 120 (126)
T ss_dssp S-CCEEEEEEEEEGGGSCTTCEEEEEEEETT--------TEEEEEEEE
T ss_pred C-CCceeEEEEEEHHHccCCCcEEEEEEcCC--------CceEEEEEE
Confidence 7 49999999999999999999999999953 467888876
No 4
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.87 E-value=2.6e-21 Score=162.94 Aligned_cols=127 Identities=26% Similarity=0.489 Sum_probs=102.2
Q ss_pred ccceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCC---ceEeeeccCCCCCCeeeeEEEEEEecCCCCEEEEEEEE
Q 016385 258 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE---KTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYD 334 (390)
Q Consensus 258 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~v~~~~~nP~w~e~f~f~v~~~~~~~L~v~v~d 334 (390)
....|.|+|+|++|++|+.+|..|.+||||++++.+... +.++|+++++++||.|||+|.|.+.+. ...|.++|||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d 94 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFD 94 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEE
Confidence 367899999999999999999889999999999984332 578999999999999999999999765 5699999999
Q ss_pred cCCCCCCceeEEEEEEccccCCCcee------eEEEEcccccccCCCCeeeeEEEEE--Eee
Q 016385 335 DEGIQSSELIGCAQVRLCELEPGKVK------DVWLKLVKDLDVQRDTKYRGQVRIK--YPP 388 (390)
Q Consensus 335 ~d~~~~d~~lG~~~v~l~~l~~~~~~------~~w~~L~~~~~~~~~~~~~G~i~l~--y~p 388 (390)
++..++|++||++.+++.++..+... ..|++|.+.. ...+..|+|+++ |.|
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~---~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRS---HKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSS---TTCCCCSEEEEEEEECC
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCccccccccccccccccc---CCCCcceEEEEEEEEeC
Confidence 99999999999999999998765432 5999997532 234678999999 877
No 5
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.85 E-value=3.4e-20 Score=155.18 Aligned_cols=118 Identities=31% Similarity=0.601 Sum_probs=102.8
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCCceEeeeccCCCCCCeeeeEEEEEEecCCCCEEEEEEEEcCCC
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEGI 338 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~~~nP~w~e~f~f~v~~~~~~~L~v~v~d~d~~ 338 (390)
...|.|+|+|++|++|+.+|..|.+||||+++++ .+.++|+++++++||.|||+|.|.+.++ .+.|.++|||+|..
T Consensus 14 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~---~~~~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~~ 89 (148)
T 3kwu_A 14 KWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVG---KTKKRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDDD 89 (148)
T ss_dssp -CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEET---TEEEECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCCS
T ss_pred ccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEEC---CEEEECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCCC
Confidence 4579999999999999999999999999999996 6789999999999999999999999876 46999999999985
Q ss_pred -----------CCCceeEEEEEEccccCCCceeeEEEEcccccccCCCCeeeeEEEEE
Q 016385 339 -----------QSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVRIK 385 (390)
Q Consensus 339 -----------~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~i~l~ 385 (390)
++|++||++.+++.++ ....+.|++|.+.. .....+|+|+++
T Consensus 90 ~~~~~~~~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~---~~~~~~G~i~l~ 142 (148)
T 3kwu_A 90 IKSRVKQRFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRT---DKSAVSGAIRLH 142 (148)
T ss_dssp HHHHHHTTTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSS---TTCCCCCEEEEE
T ss_pred ccccccccccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCC---CCCCCceEEEEE
Confidence 7899999999999998 34678999997532 234467999988
No 6
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.85 E-value=6.2e-21 Score=156.78 Aligned_cols=119 Identities=28% Similarity=0.551 Sum_probs=104.6
Q ss_pred ccceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCCceEeeeccCCCCCCeeeeEEEEEEecCCCCEEEEEEEEcCC
Q 016385 258 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEG 337 (390)
Q Consensus 258 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~~~nP~w~e~f~f~v~~~~~~~L~v~v~d~d~ 337 (390)
..+.|.|+|+|++|++|+.++..|.+||||++++. .+.++|+++++++||.|||+|.|.+.+. .+.|.++|||++.
T Consensus 9 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~---~~~~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~d~ 84 (133)
T 2ep6_A 9 VKDVGILQVKVLKAADLLAADFSGKSDPFCLLELG---NDRLQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDEDG 84 (133)
T ss_dssp CCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEET---TEEEECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEEET
T ss_pred cCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEEC---CEEEEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEECCC
Confidence 46899999999999999999989999999999997 4678999999999999999999999865 5689999999999
Q ss_pred CCCCceeEEEEEEccccCCCceeeEEEEcccccccCCCCeeeeEEEEE
Q 016385 338 IQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVRIK 385 (390)
Q Consensus 338 ~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~i~l~ 385 (390)
.++|++||++.+++.++..+. ..|++|.... .+....|+|+++
T Consensus 85 ~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~---~~~~~~G~i~l~ 127 (133)
T 2ep6_A 85 DKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKD---LEQAFKGVIYLE 127 (133)
T ss_dssp TEEEEECCBCEEEGGGCCSSC--CEECCCBCSC---TTSCCSSEEEEE
T ss_pred CCCCCeeEEEEEEHHHccCCC--ceEEEeecCC---CCCccceEEEEE
Confidence 888999999999999997654 5899997532 134678999988
No 7
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.85 E-value=2.4e-20 Score=160.85 Aligned_cols=127 Identities=26% Similarity=0.500 Sum_probs=99.7
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCC---ceEeeeccCCCCCCeeeeEEEEEEecCCCCEEEEEEEEc
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE---KTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDD 335 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~v~~~~~nP~w~e~f~f~v~~~~~~~L~v~v~d~ 335 (390)
...|.|+|+|++|++|+.++..|.+||||++++..... ++++|+++++++||.|||+|.|.+... .+.|.|+|||+
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~V~d~ 83 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFEVFDE 83 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEEEEEC
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEEEEEC
Confidence 46899999999999999999899999999999984332 578999999999999999999999754 56999999999
Q ss_pred CCCCCCceeEEEEEEccccCCCcee-e-----EEEEcccccccCCCCeeeeEEEEE--Eeec
Q 016385 336 EGIQSSELIGCAQVRLCELEPGKVK-D-----VWLKLVKDLDVQRDTKYRGQVRIK--YPPY 389 (390)
Q Consensus 336 d~~~~d~~lG~~~v~l~~l~~~~~~-~-----~w~~L~~~~~~~~~~~~~G~i~l~--y~p~ 389 (390)
+.+++|++||++.++|.++..+... + .|++|.... ..++..|+|+++ |.|.
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~---~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRS---HKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC------CCCCEEEECBCSS---TTCCCCSEEEEEEEECC-
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccC---CCCccCEEEEEEEEEEeC
Confidence 9999999999999999999765433 2 799997532 245578999999 8873
No 8
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.85 E-value=5.4e-21 Score=160.74 Aligned_cols=113 Identities=23% Similarity=0.347 Sum_probs=98.1
Q ss_pred cceeEEEEEEeeecCCccccC----------CCCCCcEEEEEEecCCCceEeeeccCCCCCCeeeeEEEEEEecCCCCEE
Q 016385 259 KPVGTLEVKLVQAKGLTNKDL----------IGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHL 328 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~----------~g~~dpyv~v~~~~~~~~~~kT~v~~~~~nP~w~e~f~f~v~~~~~~~L 328 (390)
...|.|+|+|++|++|+++|. .|.+||||++.++ +.+..+|+++++|+||.|||+|.|.+.+ .+.|
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~--~~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~L 101 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVD--QVRVGQTSTKQKTNKPTYNEEFCANVTD--GGHL 101 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEET--TEEEEECCCCSSCSSCEEEEEEEEEEEE--ECEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEEC--CEeeEEeeecCCCCCCccCcEEEEEcCC--CCEE
Confidence 678999999999999998873 2679999999996 2345799999999999999999999975 3589
Q ss_pred EEEEEEcCCCCCCceeEEEEEEccccCCC----ceeeEEEEcccccccCCCCeeeeEEEEE
Q 016385 329 VVRIYDDEGIQSSELIGCAQVRLCELEPG----KVKDVWLKLVKDLDVQRDTKYRGQVRIK 385 (390)
Q Consensus 329 ~v~v~d~d~~~~d~~lG~~~v~l~~l~~~----~~~~~w~~L~~~~~~~~~~~~~G~i~l~ 385 (390)
.++|||+|.+++|++||++.++++++..+ ...+.|++|.+ .|+|+++
T Consensus 102 ~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~----------~G~i~l~ 152 (157)
T 2fk9_A 102 ELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP----------EGKVFVV 152 (157)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS----------SCEEEEE
T ss_pred EEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC----------CcEEEEE
Confidence 99999999999999999999999998644 67899999952 6888876
No 9
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.84 E-value=2e-20 Score=154.38 Aligned_cols=115 Identities=20% Similarity=0.356 Sum_probs=98.3
Q ss_pred ceeEEEEEEeeecCCccccCCCC-----------CCcEEEEEEecCCCceEeeeccCCCCCCeeeeEEEEEEecCCCCEE
Q 016385 260 PVGTLEVKLVQAKGLTNKDLIGK-----------SDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHL 328 (390)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~-----------~dpyv~v~~~~~~~~~~kT~v~~~~~nP~w~e~f~f~v~~~~~~~L 328 (390)
..|.|+|+|++|++|+++|..++ +||||+++++ +.+..+|+++++++||.|||+|.|.+.+. +.|
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~--~~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L 79 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVD--DSRIGQTATKQKTNSPAWHDEFVTDVCNG--RKI 79 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEET--TEEEEECCCCSSCSSCEEEEEEEEEEEEE--CEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEEC--CeEeeeeeEECCCcCCccCCEEEEEecCC--CEE
Confidence 56999999999999998886544 9999999986 23457899999999999999999999765 699
Q ss_pred EEEEEEcCCCCCCceeEEEEEEccccCCC--ceeeEEEEcccccccCCCCeeeeEEEEE--Eee
Q 016385 329 VVRIYDDEGIQSSELIGCAQVRLCELEPG--KVKDVWLKLVKDLDVQRDTKYRGQVRIK--YPP 388 (390)
Q Consensus 329 ~v~v~d~d~~~~d~~lG~~~v~l~~l~~~--~~~~~w~~L~~~~~~~~~~~~~G~i~l~--y~p 388 (390)
.++|||+|..++|++||++.+++.++..+ ...+.|++|. +.|+|+++ |.+
T Consensus 80 ~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~----------~~G~i~l~l~~~~ 133 (136)
T 1gmi_A 80 ELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLE----------PEGKVYVIIDLSG 133 (136)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB----------SSCEEEEEEEEEE
T ss_pred EEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcC----------CCeEEEEEEEEEe
Confidence 99999999999999999999999998764 3458999984 26888887 654
No 10
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.83 E-value=3.9e-20 Score=153.88 Aligned_cols=110 Identities=31% Similarity=0.504 Sum_probs=100.3
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCCceEeeeccCCCCCCeeeeEEEEEEecC--CCCEEEEEEEEcC
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYDDE 336 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~~~nP~w~e~f~f~v~~~--~~~~L~v~v~d~d 336 (390)
...|.|+|+|++|++|+.++..+.+||||++++.+.+.++++|++++++.||.|||+|.|.+... ....|.|+|||++
T Consensus 31 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 110 (143)
T 3f04_A 31 FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFD 110 (143)
T ss_dssp TTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECC
T ss_pred CCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCC
Confidence 57789999999999999999889999999999976667789999999999999999999998643 4579999999999
Q ss_pred CCCCCceeEEEEEEccccCCCceeeEEEEccc
Q 016385 337 GIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (390)
Q Consensus 337 ~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~ 368 (390)
.+++|++||++.+++.++..+...+.|++|.+
T Consensus 111 ~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 111 RFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp SSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 99999999999999999999888999999964
No 11
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=3.3e-20 Score=153.96 Aligned_cols=111 Identities=26% Similarity=0.457 Sum_probs=99.4
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCCceEeeeccCCCCCCeeeeEEEEEEec---CCCCEEEEEEEEc
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVED---ESTQHLVVRIYDD 335 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~~~nP~w~e~f~f~v~~---~~~~~L~v~v~d~ 335 (390)
...+.|+|+|++|++|+.++..+.+||||++++.+.+.+.++|+++++++||.|||+|.|.+.. .....|.|+|||+
T Consensus 23 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 102 (141)
T 2d8k_A 23 FQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDY 102 (141)
T ss_dssp SSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEEC
T ss_pred CCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEEC
Confidence 4678999999999999999989999999999998666678999999999999999999998532 2357899999999
Q ss_pred CCCCCCceeEEEEEEccccCCCceeeEEEEcccc
Q 016385 336 EGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKD 369 (390)
Q Consensus 336 d~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~~ 369 (390)
+.+++|++||++.+++.++..+...+.|++|.+.
T Consensus 103 d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 103 DRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp CSSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred CCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 9998999999999999999888888999999763
No 12
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.83 E-value=6.1e-20 Score=154.41 Aligned_cols=110 Identities=31% Similarity=0.504 Sum_probs=99.8
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCCceEeeeccCCCCCCeeeeEEEEEEecC--CCCEEEEEEEEcC
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYDDE 336 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~~~nP~w~e~f~f~v~~~--~~~~L~v~v~d~d 336 (390)
...+.|+|+|++|++|+..|..+.+||||++++.+.+.+.++|+++++++||.|||+|.|.+... ....|.|+|||++
T Consensus 39 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 118 (152)
T 1rsy_A 39 FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFD 118 (152)
T ss_dssp TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECC
T ss_pred CCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECC
Confidence 46789999999999999999889999999999986666789999999999999999999988643 4579999999999
Q ss_pred CCCCCceeEEEEEEccccCCCceeeEEEEccc
Q 016385 337 GIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (390)
Q Consensus 337 ~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~ 368 (390)
.+++|++||++.+++.++..+...++|++|.+
T Consensus 119 ~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 119 RFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp SSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 99899999999999999988888899999964
No 13
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.83 E-value=8.4e-20 Score=149.78 Aligned_cols=121 Identities=21% Similarity=0.440 Sum_probs=100.7
Q ss_pred eeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCCceEeeeccCCCCCCeeeeEEEEEEecCCCCEEEEEEEEcCCCCC
Q 016385 261 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEGIQS 340 (390)
Q Consensus 261 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~~~nP~w~e~f~f~v~~~~~~~L~v~v~d~d~~~~ 340 (390)
...|+|+|++|++|+++|..|.+||||++++.+. .+.++|+++++++||.|||+|.|.+.+.. .|.++|||++..++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~-~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~l~~~v~d~d~~~~ 80 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS-GQCHSTDTVKNTLDPKWNQHYDLYVGKTD--SITISVWNHKKIHK 80 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTT-CCEEECCCCSSCSSCEEEEEEEEEEETTC--CEEEEEEEGGGTTS
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCC-CceEECCccCCCCCCCccCEEEEEeCCCC--EEEEEEEECCCCCC
Confidence 4689999999999999999999999999999743 47899999999999999999999997653 59999999998876
Q ss_pred ---CceeEEEEEEcccc-CCCceeeEEEEcccccccCCCCeeeeEEEEE
Q 016385 341 ---SELIGCAQVRLCEL-EPGKVKDVWLKLVKDLDVQRDTKYRGQVRIK 385 (390)
Q Consensus 341 ---d~~lG~~~v~l~~l-~~~~~~~~w~~L~~~~~~~~~~~~~G~i~l~ 385 (390)
|++||++.++++++ ..+.....|++|.... .....+..|+|+++
T Consensus 81 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~-~~~~~~~~G~i~v~ 128 (132)
T 3pyc_A 81 KQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLN-PSDTDAVRGQIVVS 128 (132)
T ss_dssp STTTTEEEEEEECHHHHHHHTTSCCEEEECBCSS-TTCCCCCCSEEEEE
T ss_pred CCCCCceEEEEEeHHHhhcccccCcEEEeeeecC-CCCCCceeEEEEEE
Confidence 89999999999888 3334456889997632 12234668999987
No 14
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.82 E-value=1.1e-19 Score=149.59 Aligned_cols=109 Identities=20% Similarity=0.352 Sum_probs=96.4
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecC--CCceEeeeccCCCCCCeeeeEEEEE-EecC--CCCEEEEEEE
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPL--PEKTKKSKTINNDLNPIWNEHFEFI-VEDE--STQHLVVRIY 333 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~~~kT~v~~~~~nP~w~e~f~f~-v~~~--~~~~L~v~v~ 333 (390)
...|.|.|+|++|++|+. +..|.+||||++++.+. ...+++|+++++++||.|||+|.|. +... ....|.|+||
T Consensus 17 ~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~ 95 (134)
T 2b3r_A 17 YRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVL 95 (134)
T ss_dssp EETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEE
T ss_pred ecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEE
Confidence 457899999999999997 77889999999999654 2467899999999999999999999 7532 4579999999
Q ss_pred EcCCCCCCceeEEEEEEccccCCCceeeEEEEccc
Q 016385 334 DDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (390)
Q Consensus 334 d~d~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~ 368 (390)
|++.++++++||++.+++.++..+...+.|++|.+
T Consensus 96 d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 96 SAESLRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp ECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred ECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 99999999999999999999988888899999964
No 15
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.82 E-value=2.1e-20 Score=157.58 Aligned_cols=109 Identities=17% Similarity=0.221 Sum_probs=96.1
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCC---CceEeeeccCCCCCCeeeeEEEEEEecC--CCCEEEEEEE
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP---EKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIY 333 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~~~~kT~v~~~~~nP~w~e~f~f~v~~~--~~~~L~v~v~ 333 (390)
...|.|+|+|++|++|+++|..|.+||||++++.+.. ..++||+++++|+||.|||+|.|.+... ....|.|+||
T Consensus 40 ~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~ 119 (155)
T 2z0u_A 40 EKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVC 119 (155)
T ss_dssp TTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEE
T ss_pred CCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEE
Confidence 4678999999999999999999999999999998532 2378999999999999999999998643 3568999999
Q ss_pred EcCCCCCCceeEEEEEEccccCC-CceeeEEEEcc
Q 016385 334 DDEGIQSSELIGCAQVRLCELEP-GKVKDVWLKLV 367 (390)
Q Consensus 334 d~d~~~~d~~lG~~~v~l~~l~~-~~~~~~w~~L~ 367 (390)
|+|.++++++||++.+++.++.. +....+|++|.
T Consensus 120 d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 120 TTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred ECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 99999999999999999999953 67788999985
No 16
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.82 E-value=3.4e-19 Score=152.89 Aligned_cols=124 Identities=25% Similarity=0.335 Sum_probs=101.8
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCCceEeeeccCCCCCCeeeeEEEEEEecCCCCEEEEEEEEcCCC
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEGI 338 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~~~nP~w~e~f~f~v~~~~~~~L~v~v~d~d~~ 338 (390)
...+.|+|+|++|++|+..+..+.+||||+++++ .++++|+++++++||.|||+|.|.+. + .+.|.|+|||+|.+
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~---~~~~kT~v~~~tlnP~Wne~f~f~v~-~-~~~L~~~V~D~d~~ 107 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVD---GQSKKTEKCNNTNSPKWKQPLTVIVT-P-VSKLHFRVWSHQTL 107 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEET---TEEEECCCCSSCSSCEEEEEEEEEEC-T-TCEEEEEEEECCSS
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEEC---CEEeEccccCCCCCCeECCEEEEEeC-C-CCEEEEEEEECCCC
Confidence 4678999999999999944444559999999997 47899999999999999999999985 3 67999999999999
Q ss_pred CCCceeEEEEEEccccCCC---ce--eeEEEEcccccccCCCCeeeeEEEEE--EeecC
Q 016385 339 QSSELIGCAQVRLCELEPG---KV--KDVWLKLVKDLDVQRDTKYRGQVRIK--YPPYK 390 (390)
Q Consensus 339 ~~d~~lG~~~v~l~~l~~~---~~--~~~w~~L~~~~~~~~~~~~~G~i~l~--y~p~~ 390 (390)
++|++||++.+++.++..+ .. .+.|++|... +.+.+..|+|+++ |.+++
T Consensus 108 ~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~---~~~~~~~G~L~v~l~~l~~~ 163 (173)
T 2nq3_A 108 KSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGD---KEPTETIGDLSICLDGLQLE 163 (173)
T ss_dssp SCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEES---SCTTSEEEEEEEEEESEECC
T ss_pred CCCceEEEEEEEHHHhcccCCCCcceeEEEEECccC---CCCCcccEEEEEEEeeeecc
Confidence 9999999999999998532 22 2679999764 2245678999988 77653
No 17
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.80 E-value=3.8e-19 Score=145.12 Aligned_cols=108 Identities=23% Similarity=0.418 Sum_probs=89.5
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCC--CceEeeeccCCCCCCeeeeEEEEEEec---CCCCEEEEEEE
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFIVED---ESTQHLVVRIY 333 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~v~~~~~nP~w~e~f~f~v~~---~~~~~L~v~v~ 333 (390)
...|.|.|+|++|++|+.++..|.+||||++++.+.+ ..+++|+++++++||.|||+|.|.+.. .....|.++||
T Consensus 15 ~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~ 94 (129)
T 2bwq_A 15 KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLW 94 (129)
T ss_dssp TTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEE
T ss_pred cCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEE
Confidence 4678999999999999999989999999999996543 468999999999999999999998532 24579999999
Q ss_pred EcCCCCC--CceeEEEEEEccccCCCceeeEEEEcc
Q 016385 334 DDEGIQS--SELIGCAQVRLCELEPGKVKDVWLKLV 367 (390)
Q Consensus 334 d~d~~~~--d~~lG~~~v~l~~l~~~~~~~~w~~L~ 367 (390)
|++..++ |++||++.+++.++.... .+.|++|+
T Consensus 95 d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 95 DQARVREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp EC-------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred ECCcCcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 9999887 999999999999986654 78999983
No 18
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.80 E-value=7.9e-19 Score=145.08 Aligned_cols=110 Identities=21% Similarity=0.329 Sum_probs=95.7
Q ss_pred cceeEEEEEEeeecCCccccCC-CCCCcEEEEEEecCCCceEeeeccCCCCCCeeeeEEEEE-EecC--CCCEEEEEEEE
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLI-GKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFI-VEDE--STQHLVVRIYD 334 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~-g~~dpyv~v~~~~~~~~~~kT~v~~~~~nP~w~e~f~f~-v~~~--~~~~L~v~v~d 334 (390)
...+.|.|+|++|++|+.+|.. +.+||||++++.+.+.+.++|+++++++||.|||+|.|. +... ....|.|+|||
T Consensus 19 ~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d 98 (138)
T 1ugk_A 19 FERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILS 98 (138)
T ss_dssp GGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEE
T ss_pred CCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEE
Confidence 5778999999999999999985 899999999998655678999999999999999999996 5432 34689999999
Q ss_pred cCCCCCCceeEEEEEEccccCCCcee-eEEEEccc
Q 016385 335 DEGIQSSELIGCAQVRLCELEPGKVK-DVWLKLVK 368 (390)
Q Consensus 335 ~d~~~~d~~lG~~~v~l~~l~~~~~~-~~w~~L~~ 368 (390)
+|.+++|++||++.+++.++..+... ..|++|.+
T Consensus 99 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 99 FDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp ECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred CCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 99999999999999999999776544 56788865
No 19
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.79 E-value=2e-19 Score=150.53 Aligned_cols=111 Identities=17% Similarity=0.347 Sum_probs=98.0
Q ss_pred cceeEEEEEEeeecCCcccc-CCCCCCcEEEEEEecCCC--ceEeeeccCCCCCCeeeeEEEEEEecC--CCCEEEEEEE
Q 016385 259 KPVGTLEVKLVQAKGLTNKD-LIGKSDPYAVLFVRPLPE--KTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIY 333 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d-~~g~~dpyv~v~~~~~~~--~~~kT~v~~~~~nP~w~e~f~f~v~~~--~~~~L~v~v~ 333 (390)
...|.|.|+|++|++|+.++ ..+.+||||++++.+.+. ++++|+++++++||.|||+|.|.+... ....|.|+||
T Consensus 20 ~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~ 99 (148)
T 3fdw_A 20 QQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVW 99 (148)
T ss_dssp TTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEE
T ss_pred CCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEE
Confidence 56789999999999999888 578999999999986543 488999999999999999999998654 3457999999
Q ss_pred EcCCCCCCceeEEEEEEccccCCCceeeEEEEcccc
Q 016385 334 DDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKD 369 (390)
Q Consensus 334 d~d~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~~ 369 (390)
|+|.+++|++||++.+++.++..+...+.|++|.+.
T Consensus 100 d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 135 (148)
T 3fdw_A 100 HHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGK 135 (148)
T ss_dssp EECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC
T ss_pred ECCCCcCCcEEEEEEEEcccccccCCccceEECcCc
Confidence 999998999999999999999877778899999864
No 20
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.79 E-value=1.6e-18 Score=160.79 Aligned_cols=128 Identities=29% Similarity=0.489 Sum_probs=110.5
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCCceEeeeccCCCCCCeeeeEEEEEEecC--CCCEEEEEEEEcC
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYDDE 336 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~~~nP~w~e~f~f~v~~~--~~~~L~v~v~d~d 336 (390)
...|.|+|+|++|++|+.+|..|.+||||++++.+.+.+.++|+++++++||.|||+|.|.+... ..+.|.|+|||+|
T Consensus 16 ~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d 95 (284)
T 2r83_A 16 FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFD 95 (284)
T ss_dssp TTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECC
T ss_pred CCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECC
Confidence 46789999999999999999899999999999986656788999999999999999999998653 4579999999999
Q ss_pred CCCCCceeEEEEEEccccCCCceeeEEEEcccccccCCCCeeeeEEEEE--Eee
Q 016385 337 GIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVRIK--YPP 388 (390)
Q Consensus 337 ~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~i~l~--y~p 388 (390)
.+++|++||++.+++.++..+...+.|++|..... ......|+|+++ |.|
T Consensus 96 ~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~--~~~~~~G~i~l~l~~~p 147 (284)
T 2r83_A 96 RFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEK--EEQEKLGDICFSLRYVP 147 (284)
T ss_dssp SSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSS--CCCCCCCEEEEEEEEET
T ss_pred CCCCCceeEEEEEcchhcccCCcceeEEEeecccc--ccccccccEEEEEEecC
Confidence 99899999999999999988888899999976321 123457888887 765
No 21
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.79 E-value=5.3e-19 Score=146.15 Aligned_cols=107 Identities=16% Similarity=0.149 Sum_probs=93.4
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecC-CCceEeeeccCCCCCCeeeeEEEEEEecC--CCCEEEEEEEEc
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPL-PEKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYDD 335 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~-~~~~~kT~v~~~~~nP~w~e~f~f~v~~~--~~~~L~v~v~d~ 335 (390)
...+.|+|+|++|+ ++|..|.+||||++++.+. +...++|+++++++||.|||+|.|.+... ....|.|+|||+
T Consensus 23 ~~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~ 99 (138)
T 1wfm_A 23 CQKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTC 99 (138)
T ss_dssp TTTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEEC
T ss_pred CCCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEEC
Confidence 46789999999999 3677899999999999753 33468999999999999999999998654 356899999999
Q ss_pred CCCCCCceeEEEEEEccccCCCceeeEEEEccc
Q 016385 336 EGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (390)
Q Consensus 336 d~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~ 368 (390)
|.+++|++||++.+++.++..+...+.|++|.+
T Consensus 100 d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 100 DRFSRHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp CSSCTTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred CCCCCCcEEEEEEEEcccccCcccccceeeCcC
Confidence 999999999999999999977777889999976
No 22
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.79 E-value=6.5e-19 Score=145.26 Aligned_cols=109 Identities=33% Similarity=0.505 Sum_probs=96.0
Q ss_pred ceeEEEEEEeeecCCccccCCCCCCcEEEEEEecC--CCceEeeeccCCCCCCeeeeEEEEEEecC-CCCEEEEEEEEcC
Q 016385 260 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPL--PEKTKKSKTINNDLNPIWNEHFEFIVEDE-STQHLVVRIYDDE 336 (390)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~~~kT~v~~~~~nP~w~e~f~f~v~~~-~~~~L~v~v~d~d 336 (390)
..|.|.|+|++|++|+..+..|.+||||++++.+. +...++|++++++.||.|||+|.|.+... ..+.|.++|||++
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 46899999999999999998999999999999643 35688999999999999999999998653 2358999999999
Q ss_pred CCCCCceeEEEEEEccccCCCceeeEEEEcccc
Q 016385 337 GIQSSELIGCAQVRLCELEPGKVKDVWLKLVKD 369 (390)
Q Consensus 337 ~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~~ 369 (390)
..++|++||++.++++++..+. .+.|++|.+.
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred CCCCCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 9999999999999999997655 7899999763
No 23
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=3.1e-19 Score=148.24 Aligned_cols=110 Identities=26% Similarity=0.405 Sum_probs=95.4
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCC--ceEeeeccCCCCCCeeeeEEEEEEecC--CCCEEEEEEEE
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE--KTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYD 334 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~--~~~kT~v~~~~~nP~w~e~f~f~v~~~--~~~~L~v~v~d 334 (390)
...|.|.|+|++|++|+.++..| +||||++++.+.+. .+++|+++++++||.|||+|.|.+... ....|.|+|||
T Consensus 21 ~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 99 (142)
T 2dmg_A 21 SQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKN 99 (142)
T ss_dssp TTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEE
T ss_pred CCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEE
Confidence 46789999999999999999888 99999999975444 688999999999999999999998542 34589999999
Q ss_pred cCCCCC--CceeEEEEEEccccCCCceeeEEEEcccc
Q 016385 335 DEGIQS--SELIGCAQVRLCELEPGKVKDVWLKLVKD 369 (390)
Q Consensus 335 ~d~~~~--d~~lG~~~v~l~~l~~~~~~~~w~~L~~~ 369 (390)
++.+++ +++||++.+++.++..+...+.|++|.+.
T Consensus 100 ~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~ 136 (142)
T 2dmg_A 100 SGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTED 136 (142)
T ss_dssp CCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCS
T ss_pred CCCccccCCcEEEEEEEecccccccccccceeeccCC
Confidence 998753 57999999999999877788899999763
No 24
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.79 E-value=1.1e-18 Score=146.23 Aligned_cols=108 Identities=35% Similarity=0.546 Sum_probs=95.4
Q ss_pred ceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCC--CceEeeeccCCCCCCeeeeEEEEEEecC-CCCEEEEEEEEcC
Q 016385 260 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFIVEDE-STQHLVVRIYDDE 336 (390)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~v~~~~~nP~w~e~f~f~v~~~-~~~~L~v~v~d~d 336 (390)
..|.|+|+|++|++|+.+|..+.+||||++++.+.+ ...++|+++++++||.|||+|.|.+... ....|.|+|||++
T Consensus 29 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d 108 (149)
T 1a25_A 29 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 108 (149)
T ss_dssp SSSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECC
Confidence 357899999999999999988999999999998533 4578999999999999999999998754 2458999999999
Q ss_pred CCCCCceeEEEEEEccccCCCceeeEEEEccc
Q 016385 337 GIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (390)
Q Consensus 337 ~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~ 368 (390)
..++|++||++.+++.++..+ ..+.|++|..
T Consensus 109 ~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 109 LTSRNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp SSSCCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred CCCCCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 998999999999999999776 4789999975
No 25
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.79 E-value=9.3e-19 Score=145.36 Aligned_cols=110 Identities=27% Similarity=0.519 Sum_probs=97.3
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCC--CceEeeeccCCCCCCeeeeEEEEE-EecC--CCCEEEEEEE
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFI-VEDE--STQHLVVRIY 333 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~v~~~~~nP~w~e~f~f~-v~~~--~~~~L~v~v~ 333 (390)
...|.|.|+|++|++|+.++..|.+||||++++.+.+ ...++|+++++++||.|||+|.|. +... ....|.|+||
T Consensus 26 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 105 (142)
T 2chd_A 26 QDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVC 105 (142)
T ss_dssp GGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEE
T ss_pred CCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEE
Confidence 5788999999999999999988999999999998533 368899999999999999999998 5432 2358999999
Q ss_pred EcCCCCCCceeEEEEEEccccCCCceeeEEEEccc
Q 016385 334 DDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (390)
Q Consensus 334 d~d~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~ 368 (390)
|++.+++|++||++.+++.++..+.....|++|.+
T Consensus 106 d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 106 DEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred ECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 99999899999999999999998888899999864
No 26
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=2.9e-19 Score=149.38 Aligned_cols=110 Identities=21% Similarity=0.394 Sum_probs=95.7
Q ss_pred cceeEEEEEEeeecCCccc-cC------CCCCCcEEEEEEecCCCceEeeeccCCCCCCeeeeEEEEEEecC--CCCEEE
Q 016385 259 KPVGTLEVKLVQAKGLTNK-DL------IGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLV 329 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~-d~------~g~~dpyv~v~~~~~~~~~~kT~v~~~~~nP~w~e~f~f~v~~~--~~~~L~ 329 (390)
...|.|+|+|++|++|+.. +. .+.+||||++++.+.+.++++|+++++++||.|||+|.|.+... ....|.
T Consensus 23 ~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 102 (147)
T 2enp_A 23 LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLL 102 (147)
T ss_dssp TTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEE
T ss_pred CCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEE
Confidence 5678999999999999984 43 35899999999986656788999999999999999999998643 245899
Q ss_pred EEEEEcCCCCCCceeEEEEEEccccCCCceeeEEEEccc
Q 016385 330 VRIYDDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (390)
Q Consensus 330 v~v~d~d~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~ 368 (390)
|+|||++.+++|++||++.+++.++..+.....|++|.+
T Consensus 103 ~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~ 141 (147)
T 2enp_A 103 LTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIP 141 (147)
T ss_dssp EEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBC
T ss_pred EEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeec
Confidence 999999999999999999999999987777789999975
No 27
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.78 E-value=9.1e-19 Score=150.16 Aligned_cols=110 Identities=25% Similarity=0.390 Sum_probs=96.5
Q ss_pred ceeEEEEEEeeecCCccccC-CCCCCcEEEEEEecCCC--ceEeeeccCCCCCCeeeeEEEEEEecCCCCEEEEEEE-Ec
Q 016385 260 PVGTLEVKLVQAKGLTNKDL-IGKSDPYAVLFVRPLPE--KTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIY-DD 335 (390)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~-~g~~dpyv~v~~~~~~~--~~~kT~v~~~~~nP~w~e~f~f~v~~~~~~~L~v~v~-d~ 335 (390)
..|.|.|+|++|++|+.+|. .|.+||||++++.+.+. .+++|+++++++||.|||+|.|.+.. ....|.|+|| |+
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QGKVLQVIVWGDY 106 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TTEEEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CCCEEEEEEEEcC
Confidence 57899999999999999985 69999999999975432 37899999999999999999999854 4679999999 99
Q ss_pred CCCCCCceeEEEEEEccccCCCceeeEEEEccccc
Q 016385 336 EGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDL 370 (390)
Q Consensus 336 d~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~~~ 370 (390)
|.+++|++||++.++++++..+...+.|++|.+..
T Consensus 107 d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 107 GRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPS 141 (171)
T ss_dssp STTCSSEEEEEEEECGGGSCTTSCEEEEEECBCGG
T ss_pred CCCCCCCEEEEEEEEHHHcccCCCcceeEECCCcc
Confidence 99999999999999999998888899999998743
No 28
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.78 E-value=4.5e-19 Score=147.00 Aligned_cols=110 Identities=23% Similarity=0.412 Sum_probs=94.8
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCC--CceEeeeccCCCCCCeeeeEEEEEEec---CCCCEEEEEEE
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFIVED---ESTQHLVVRIY 333 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~v~~~~~nP~w~e~f~f~v~~---~~~~~L~v~v~ 333 (390)
...+.|+|+|++|++|+.++..+.+||||++++.+.+ .++++|+++++++||.|||+|.|.+.. .....|.|+||
T Consensus 18 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 97 (141)
T 1v27_A 18 KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLW 97 (141)
T ss_dssp TTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEE
T ss_pred CCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEE
Confidence 4568999999999999999989999999999986432 468899999999999999999998432 24579999999
Q ss_pred EcCCCCC--CceeEEEEEEccccCCCceeeEEEEcccc
Q 016385 334 DDEGIQS--SELIGCAQVRLCELEPGKVKDVWLKLVKD 369 (390)
Q Consensus 334 d~d~~~~--d~~lG~~~v~l~~l~~~~~~~~w~~L~~~ 369 (390)
|++..++ |++||++.+++.++.... .+.|++|.+.
T Consensus 98 d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~ 134 (141)
T 1v27_A 98 DQARVREEESEFLGEILIELETALLDD-EPHWYKLQTH 134 (141)
T ss_dssp EBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCC
T ss_pred ECCCCcCCCCceEEEEEEEccccCCCC-CCceEECccc
Confidence 9999886 999999999999986554 7899999763
No 29
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.78 E-value=1.9e-19 Score=149.52 Aligned_cols=108 Identities=23% Similarity=0.453 Sum_probs=94.7
Q ss_pred eeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCC-----------ceEeeeccCCCCCCeeeeEEEEE-Eec--CCCC
Q 016385 261 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE-----------KTKKSKTINNDLNPIWNEHFEFI-VED--ESTQ 326 (390)
Q Consensus 261 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~-----------~~~kT~v~~~~~nP~w~e~f~f~-v~~--~~~~ 326 (390)
.|.|+|+|++|++|+.+|..|.+||||++++.+... ..++|+++++++||.|||+|.|. +.. ....
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 689999999999999999999999999999985432 35789999999999999999997 542 2467
Q ss_pred EEEEEEEEcCCCCCCceeEEEEEEccccCCCceeeEEEEccc
Q 016385 327 HLVVRIYDDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (390)
Q Consensus 327 ~L~v~v~d~d~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~ 368 (390)
.|.++|||+|.+++|++||++.+++.++..+...+.|++|.+
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCc
Confidence 999999999999999999999999999877777889999975
No 30
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.77 E-value=2.6e-18 Score=144.61 Aligned_cols=110 Identities=27% Similarity=0.499 Sum_probs=94.9
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCC--CceEeeeccCCCCCCeeeeEEEEEEecC-CCCEEEEEEEEc
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFIVEDE-STQHLVVRIYDD 335 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~v~~~~~nP~w~e~f~f~v~~~-~~~~L~v~v~d~ 335 (390)
...|.|.|+|++|++|+..| .|.+||||++++.+.. ..+++|+++++++||.|||+|.|.+... ....|.|+|||+
T Consensus 24 ~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~ 102 (153)
T 3fbk_A 24 AQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNR 102 (153)
T ss_dssp ESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEEC
T ss_pred CCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeC
Confidence 67899999999999999998 6999999999996432 4578999999999999999999998432 234699999999
Q ss_pred CCCCC-CceeEEEEEEccccCC-CceeeEEEEcccc
Q 016385 336 EGIQS-SELIGCAQVRLCELEP-GKVKDVWLKLVKD 369 (390)
Q Consensus 336 d~~~~-d~~lG~~~v~l~~l~~-~~~~~~w~~L~~~ 369 (390)
+.+++ |++||++.+++.++.. +...+.|++|.+.
T Consensus 103 d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~ 138 (153)
T 3fbk_A 103 ASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGE 138 (153)
T ss_dssp CSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCT
T ss_pred CCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCCh
Confidence 99876 9999999999999974 7788999999874
No 31
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.77 E-value=4.8e-18 Score=143.85 Aligned_cols=111 Identities=32% Similarity=0.459 Sum_probs=95.4
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCC--ceEeeeccCCCCCCeeeeEEEEEEecC--CCCEEEEEEEE
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE--KTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYD 334 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~--~~~kT~v~~~~~nP~w~e~f~f~v~~~--~~~~L~v~v~d 334 (390)
...|.|.|+|++|++|+.+|..|.+||||++++.+.+. ..++|+++++++||.|||+|.|.+... ....|.|+|||
T Consensus 22 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d 101 (159)
T 1tjx_A 22 PTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLD 101 (159)
T ss_dssp TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEE
T ss_pred CCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEE
Confidence 56789999999999999999889999999999975432 478999999999999999999998654 24589999999
Q ss_pred cCCCCCCceeEEEEEEcccc------------CCCceeeEEEEcccc
Q 016385 335 DEGIQSSELIGCAQVRLCEL------------EPGKVKDVWLKLVKD 369 (390)
Q Consensus 335 ~d~~~~d~~lG~~~v~l~~l------------~~~~~~~~w~~L~~~ 369 (390)
+|.+++|++||++.+++..+ .++...+.|++|.+.
T Consensus 102 ~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 102 YDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 148 (159)
T ss_dssp CCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCH
T ss_pred CCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCc
Confidence 99999999999999999843 345677899999763
No 32
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.76 E-value=4.7e-18 Score=140.22 Aligned_cols=96 Identities=25% Similarity=0.473 Sum_probs=84.7
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCC--ceEeeeccCCCCCCeeeeEEEEEEecCC--CCEEEEEEEE
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE--KTKKSKTINNDLNPIWNEHFEFIVEDES--TQHLVVRIYD 334 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~--~~~kT~v~~~~~nP~w~e~f~f~v~~~~--~~~L~v~v~d 334 (390)
...|.|.|+|++|++|+..|..|.+||||++++.+.+. .+++|++++++.||.|||+|.|.+.... ...|.++|||
T Consensus 13 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d 92 (138)
T 3n5a_A 13 PSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMD 92 (138)
T ss_dssp TTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEE
T ss_pred CCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEE
Confidence 46789999999999999999889999999999975432 4788999999999999999999986542 3689999999
Q ss_pred cCCCCCCceeEEEEEEcccc
Q 016385 335 DEGIQSSELIGCAQVRLCEL 354 (390)
Q Consensus 335 ~d~~~~d~~lG~~~v~l~~l 354 (390)
++.+++|++||++.++++++
T Consensus 93 ~~~~~~~~~lG~~~i~l~~~ 112 (138)
T 3n5a_A 93 KDKLSRNDVIGKIYLSWKSG 112 (138)
T ss_dssp CCSSSCCEEEEEEEESSSSC
T ss_pred CCCCCCCcEEEEEEEccccC
Confidence 99999999999999999864
No 33
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.75 E-value=1.3e-17 Score=142.24 Aligned_cols=110 Identities=25% Similarity=0.423 Sum_probs=94.2
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCC--CceEeeeccCCCCCCeeeeEEEEEEecC--CCCEEEEEEEE
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYD 334 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~v~~~~~nP~w~e~f~f~v~~~--~~~~L~v~v~d 334 (390)
...|.|.|+|++|++|+.+|..|.+||||++++.+.+ ...++|+++++++||.|||+|.|.+... ....|.|+|||
T Consensus 34 ~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 113 (166)
T 2cm5_A 34 TQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWD 113 (166)
T ss_dssp TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEE
T ss_pred CCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEE
Confidence 5688999999999999999989999999999998532 3688999999999999999999998653 35699999999
Q ss_pred cCCCCCCceeEEEEEEcccc------------CCCceeeEEEEccc
Q 016385 335 DEGIQSSELIGCAQVRLCEL------------EPGKVKDVWLKLVK 368 (390)
Q Consensus 335 ~d~~~~d~~lG~~~v~l~~l------------~~~~~~~~w~~L~~ 368 (390)
++.+++|++||++.+++.++ .++.....|+.|..
T Consensus 114 ~d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~~ 159 (166)
T 2cm5_A 114 YDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQN 159 (166)
T ss_dssp CCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCCEEEEEECBC
T ss_pred CCCCCCCcEEEeEEEecccCCchhHHHHHHHhCCCCcceEeeECCC
Confidence 99999999999999999874 24556677877764
No 34
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.74 E-value=1.2e-17 Score=140.52 Aligned_cols=107 Identities=24% Similarity=0.351 Sum_probs=84.2
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCCc--eEeeeccCCCCCCeeeeEEEEEEecC--CCCEEEEEEEE
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEK--TKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYD 334 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~--~~kT~v~~~~~nP~w~e~f~f~v~~~--~~~~L~v~v~d 334 (390)
...|.|.|+|++|++|+.+|..|.+||||++++.+.+.. +++|+++++++||.|||+|.|.+... ....|.|+|||
T Consensus 27 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d 106 (153)
T 1w15_A 27 STTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLD 106 (153)
T ss_dssp TTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEE
T ss_pred CCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEe
Confidence 467899999999999999998899999999999754332 67999999999999999999998754 24689999999
Q ss_pred cCCCCCCceeEEEEEEccccCCCceeeEEEEcc
Q 016385 335 DEGIQSSELIGCAQVRLCELEPGKVKDVWLKLV 367 (390)
Q Consensus 335 ~d~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~ 367 (390)
++.+++|++||++.+++.+ .+...++|++|.
T Consensus 107 ~d~~~~~~~lG~~~i~l~~--~~~~~~~W~~l~ 137 (153)
T 1w15_A 107 SERGSRNEVIGRLVLGATA--EGSGGGHWKEIC 137 (153)
T ss_dssp CCTTSCCEEEEEEEESTTC--CSHHHHHHHHHH
T ss_pred CCCCCCCcEEEEEEECCCC--CchHHHHHHHHH
Confidence 9999999999999999987 233344555554
No 35
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.72 E-value=2.4e-17 Score=153.85 Aligned_cols=127 Identities=29% Similarity=0.472 Sum_probs=104.8
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCCceEeeeccCCCCCCeeeeEEEEEEecC--CCCEEEEEEEEcC
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYDDE 336 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~~~nP~w~e~f~f~v~~~--~~~~L~v~v~d~d 336 (390)
...|.|.|+|++|++|+.+|..|.+||||++++.+.+.+.++|+++++++||.|||+|.|.+... ....|.|+|||+|
T Consensus 17 ~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d 96 (296)
T 1dqv_A 17 YGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFD 96 (296)
T ss_dssp SSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECC
T ss_pred CCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcC
Confidence 56789999999999999999999999999999976667789999999999999999999998643 3458999999999
Q ss_pred CCCCCceeEEEEEE-ccccCC-CceeeEEEEcccccccCCCCeeeeEEEEE--Eee
Q 016385 337 GIQSSELIGCAQVR-LCELEP-GKVKDVWLKLVKDLDVQRDTKYRGQVRIK--YPP 388 (390)
Q Consensus 337 ~~~~d~~lG~~~v~-l~~l~~-~~~~~~w~~L~~~~~~~~~~~~~G~i~l~--y~p 388 (390)
.+++|++||++.++ +.++.. +...+.|++|.... ......|+|+++ |.|
T Consensus 97 ~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~---~~~~~~G~i~vsl~y~~ 149 (296)
T 1dqv_A 97 RFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGG---SEKADLGELNFSLCYLP 149 (296)
T ss_dssp SSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCS---SCCSCCCEEEEEEEEET
T ss_pred CCCCCceEEEEEeccccccccCCccceeeecccccc---ccccccceEEEEEEecc
Confidence 99999999999996 444433 34567899997532 234457998887 765
No 36
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.72 E-value=2.7e-16 Score=156.76 Aligned_cols=172 Identities=19% Similarity=0.292 Sum_probs=125.6
Q ss_pred eEEEEeccce-eEEEEEEEccccccc-CCCcHHHHHHHHHHHhhccccC-----C--ceeEeeCC---------CCC--c
Q 016385 194 AVSYSLREKK-KLDFKLKVVGGDIST-IPGLSDSIEATIHDAIEDSITW-----P--VRKIVPIL---------PGD--Y 253 (390)
Q Consensus 194 ~~~~~f~~~P-~l~f~l~~~g~~~~~-iP~l~~~i~~~i~~~i~~~~v~-----P--~~~~ipl~---------~~~--~ 253 (390)
.+.=++...| .|++.+.++. ++.. -+.....++.++.+.+.+.-.+ | |- ..++. ++. .
T Consensus 306 ~W~~Sv~~~P~~I~~~l~PI~-~Lv~~~~~kr~nLk~Ai~~Yl~e~~~c~~C~~PC~nn-~~~l~g~~C~C~C~~~~~t~ 383 (540)
T 3nsj_A 306 TWTASLPSNPGLVDYSLEPLH-TLLEEQNPKREALRQAISHYIMSRARWQNCSRPCRSG-QHKSSHDSCQCECQDSKVTN 383 (540)
T ss_dssp HHHHHTTTSCEEEEEEEEEGG-GGSCTTCTHHHHHHHHHHHHHHHTCBCCCTTSCCBTT-EEECSSCTTCEEESCTTTBC
T ss_pred HHHHHHhhCCceEEEEEEEHH-HhcCCcHHHHHHHHHHHHHHHHhcCchhhhcccccCC-CccCCCCceEeeCCCCCCcc
Confidence 3334455555 6788888864 3322 2334567888888888776555 2 11 11221 110 0
Q ss_pred cc-cc-ccceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCCceEeeeccCCCCCCeeeeEEEEEEec-CCCCEEEE
Q 016385 254 SE-LE-LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVED-ESTQHLVV 330 (390)
Q Consensus 254 ~~-~~-~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~~~nP~w~e~f~f~v~~-~~~~~L~v 330 (390)
.+ .+ ....|.|+|+|++|++|+. |..|++||||+++++ .+.++|+++++++||.|||+|.|.+.+ ...+.|+|
T Consensus 384 ~~~C~~~~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~---~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~ 459 (540)
T 3nsj_A 384 QDCCPRQRGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFG---GQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRV 459 (540)
T ss_dssp GGGCBSSTTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEET---TEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEE
T ss_pred cccccccCcccEEEEEEEEccCCCc-ccCCCcCeEEEEEEC---CEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEE
Confidence 11 11 2458999999999999998 989999999999997 467999999999999999999998653 45779999
Q ss_pred EEEEcCCCCCCceeEEEEEEccccCCCceeeEEEEcccccccCCCCeeeeEEEEEE
Q 016385 331 RIYDDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVRIKY 386 (390)
Q Consensus 331 ~v~d~d~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~i~l~y 386 (390)
+|||+|..++||+||++.++|. .| ..+.|++|. .|.|+++|
T Consensus 460 ~V~D~D~~~~dD~LG~~~~~L~---~g-~~~~~~~l~-----------~G~l~~~~ 500 (540)
T 3nsj_A 460 QVWDADYGWDDDLLGSCDRSPH---SG-FHEVTCELN-----------HGRVKFSY 500 (540)
T ss_dssp EEEECCSSSCCEEEEEEEECCC---SE-EEEEEEECS-----------SSEEEEEE
T ss_pred EEEECCCCCCCCEEEEEEEEee---CC-cEEEEEEcC-----------CeEEEEEE
Confidence 9999999989999999999986 33 467898873 47788774
No 37
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.70 E-value=5.8e-17 Score=162.64 Aligned_cols=116 Identities=22% Similarity=0.454 Sum_probs=102.2
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCCceEeeeccCCCCCCeeeeEEEEEEecCCCCEEEEEEEEcCCC
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEGI 338 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~~~nP~w~e~f~f~v~~~~~~~L~v~v~d~d~~ 338 (390)
...|.|+|+|++|++|+.+|..|.+||||+++++ .++++|+++++++||.|||+|.|.+..+..+.|.|+|||+|.+
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~---~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~ 460 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMG---SQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQF 460 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEET---TEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSS
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEEC---CeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCC
Confidence 5678999999999999999999999999999996 5789999999999999999999999877778999999999999
Q ss_pred CCCceeEEEEEEccccCCCce----eeEEEEcccccccCCCCeeeeEEEEE
Q 016385 339 QSSELIGCAQVRLCELEPGKV----KDVWLKLVKDLDVQRDTKYRGQVRIK 385 (390)
Q Consensus 339 ~~d~~lG~~~v~l~~l~~~~~----~~~w~~L~~~~~~~~~~~~~G~i~l~ 385 (390)
++|++||++.++++++..+.. ...|+++.. +.+|+|+++
T Consensus 461 ~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~--------~~~G~i~l~ 503 (510)
T 3jzy_A 461 SPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHE--------VPTGEVWVR 503 (510)
T ss_dssp SSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBS--------SSSCEEEEE
T ss_pred CCCCceEEEEEEHHHhccccCCCCceeeeecCCC--------CCCceEEEE
Confidence 999999999999999876543 678999843 356888877
No 38
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.67 E-value=4.3e-16 Score=127.27 Aligned_cols=99 Identities=22% Similarity=0.315 Sum_probs=78.2
Q ss_pred ceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCCceEeeeccC-CCCCCeeeeEEEEEEecCCCCEEEEEEEEcCCC
Q 016385 260 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTIN-NDLNPIWNEHFEFIVEDESTQHLVVRIYDDEGI 338 (390)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~-~~~nP~w~e~f~f~v~~~~~~~L~v~v~d~d~~ 338 (390)
+.|.|.|+|++|+++.. .|.+||||++. . . ..+|++++ ++.||.|||+|.|.+.+. ...|.++|||+| .
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~-~---~-~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~ 72 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK-V---Q-NVKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-L 72 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE-E---T-TEEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-S
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE-e---c-CEEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-C
Confidence 46899999999998852 57899999999 3 2 34455554 799999999999999865 458999999999 8
Q ss_pred CCCceeEEEEEEccccCCCc--eeeEEEEccc
Q 016385 339 QSSELIGCAQVRLCELEPGK--VKDVWLKLVK 368 (390)
Q Consensus 339 ~~d~~lG~~~v~l~~l~~~~--~~~~w~~L~~ 368 (390)
++|++||++.+++.++.... ....|.++..
T Consensus 73 ~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~ 104 (131)
T 2cjt_A 73 IWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDS 104 (131)
T ss_dssp SCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC
T ss_pred CCCCeEEEEEEEHHHhhhcCCCCccccEEccc
Confidence 89999999999999985432 2235666643
No 39
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.66 E-value=8.3e-16 Score=124.27 Aligned_cols=119 Identities=19% Similarity=0.277 Sum_probs=99.6
Q ss_pred ceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCCceEeeeccC-CCCCCeeeeEEEEEEecC--CCCEEEEEEEEcC
Q 016385 260 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTIN-NDLNPIWNEHFEFIVEDE--STQHLVVRIYDDE 336 (390)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~-~~~nP~w~e~f~f~v~~~--~~~~L~v~v~d~d 336 (390)
..-.|+|++.+|++|+ |++|||+++.+. +.+++|++++ ++.||.|||.|++.+..+ .+..|.+.|+|++
T Consensus 19 ~~msL~V~l~~a~~Lp-----g~~Dp~akv~FR---g~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~ 90 (144)
T 3l9b_A 19 SHMALIVHLKTVSELR-----GRADRIAKVTFR---GQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYS 90 (144)
T ss_dssp CCEEEEEEEEEEESCC-----SCEEEEEEEEET---TEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEEC
T ss_pred CcEEEEEEEEEecCCC-----CCCCCeEEEEEe---ccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECc
Confidence 3457999999999998 689999999996 7789999998 799999999999998754 5679999999999
Q ss_pred CCCCCceeEEEEEEccccCCCceeeEEEEcccccccCCCCeeeeEEEEE--EeecC
Q 016385 337 GIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVRIK--YPPYK 390 (390)
Q Consensus 337 ~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~i~l~--y~p~~ 390 (390)
+++++++||++.++|.++..+.....+-+|... ++....++|.++ |.|.+
T Consensus 91 ~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~----n~~~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 91 KVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDD----NNAIIKTSLSMEVRYQAAD 142 (144)
T ss_dssp TTSCCEEEEEEEEESHHHHHHSEEEEEEEEECT----TSCEEEEEEEEEEEEEETT
T ss_pred cccCCCEEEEEEEEhHHhccCCeEEEeecccCC----CCCccccEEEEEEEecCCC
Confidence 999999999999999999776666666667642 233445788888 99863
No 40
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.64 E-value=3.4e-16 Score=160.72 Aligned_cols=111 Identities=28% Similarity=0.557 Sum_probs=101.4
Q ss_pred ccceeEEEEEEeeecCCcc---ccCCCCCCcEEEEEEecCCCceEeeeccCCCCCCeeeeEEEEEEecCCCCEEEEEEEE
Q 016385 258 LKPVGTLEVKLVQAKGLTN---KDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYD 334 (390)
Q Consensus 258 ~~~~g~L~V~v~~a~~L~~---~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~~~nP~w~e~f~f~v~~~~~~~L~v~v~d 334 (390)
..+.|.|+|+|++|++|+. +|..|.+||||++++.+...++++|+++++++||.|||+|.|.+.....+.|.|+|||
T Consensus 14 ~~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D 93 (749)
T 1cjy_A 14 HQYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMD 93 (749)
T ss_dssp CCCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEE
T ss_pred CCCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEE
Confidence 3678999999999999998 8888999999999998655578999999999999999999999988767799999999
Q ss_pred cCCCCCCceeEEEEEEccccCCCceeeEEEEcccc
Q 016385 335 DEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKD 369 (390)
Q Consensus 335 ~d~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~~ 369 (390)
+|.++ |++||++.+++.++..+...+.|++|.+.
T Consensus 94 ~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~~ 127 (749)
T 1cjy_A 94 ANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQV 127 (749)
T ss_dssp CCSSS-CEEEEEECCBSTTSCTTCCCCEEEEETTT
T ss_pred CCCCC-CceeEEEEEEHHHcCCCCceEEEEecCCC
Confidence 99998 99999999999999888888999999753
No 41
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.63 E-value=3.2e-15 Score=127.12 Aligned_cols=88 Identities=20% Similarity=0.279 Sum_probs=74.2
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCCceEeeeccC-CCCCCeeeeEEEEEEecCCCCEEEEEEEEcCC
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTIN-NDLNPIWNEHFEFIVEDESTQHLVVRIYDDEG 337 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~-~~~nP~w~e~f~f~v~~~~~~~L~v~v~d~d~ 337 (390)
.+.|.|+|+|++|+++. ..+.+||||++. . +..+|++++ ++.||.|||+|.|.+.+. ...|.|+|||+|
T Consensus 11 g~~~~L~V~V~~A~~l~---~~g~~DPYV~v~-~----~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d- 80 (167)
T 2cjs_A 11 GILSLLCVGVKKAKFDG---AQEKFNTYVTLK-V----QNVESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG- 80 (167)
T ss_dssp SCCCEEEEEEEEEECSS---CGGGCEEEEEEE-E----TTEEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECC-
T ss_pred CceEEEEEEEEEEECCC---CCCCCCeEEEEE-e----cceEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECC-
Confidence 45789999999999884 357899999999 3 235566665 699999999999999865 458999999999
Q ss_pred CCCCceeEEEEEEccccCC
Q 016385 338 IQSSELIGCAQVRLCELEP 356 (390)
Q Consensus 338 ~~~d~~lG~~~v~l~~l~~ 356 (390)
+++|++||++.++|.++..
T Consensus 81 ~~~dd~iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 81 LIWDTMVGTVWIPLRTIRQ 99 (167)
T ss_dssp SSCCEEEEEEEEEGGGSCB
T ss_pred CCCCceEEEEEEEHHHhcc
Confidence 8899999999999999853
No 42
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.63 E-value=2.6e-15 Score=139.14 Aligned_cols=111 Identities=32% Similarity=0.459 Sum_probs=94.6
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCC--ceEeeeccCCCCCCeeeeEEEEEEecCC--CCEEEEEEEE
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE--KTKKSKTINNDLNPIWNEHFEFIVEDES--TQHLVVRIYD 334 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~--~~~kT~v~~~~~nP~w~e~f~f~v~~~~--~~~L~v~v~d 334 (390)
+..|.|.|+|++|++|+.+|..|.+||||++++.+.+. .+++|+++++++||.|||+|.|.+.... ...|.|+|||
T Consensus 147 p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d 226 (284)
T 2r83_A 147 PTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLD 226 (284)
T ss_dssp TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEE
T ss_pred CcCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEe
Confidence 45789999999999999999899999999999875433 4678999999999999999999986542 4579999999
Q ss_pred cCCCCCCceeEEEEEEcccc------------CCCceeeEEEEcccc
Q 016385 335 DEGIQSSELIGCAQVRLCEL------------EPGKVKDVWLKLVKD 369 (390)
Q Consensus 335 ~d~~~~d~~lG~~~v~l~~l------------~~~~~~~~w~~L~~~ 369 (390)
++.+++|++||++.++++.+ .++.....|++|.+.
T Consensus 227 ~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 227 YDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp CCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred CCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 99999999999999999752 345667899999763
No 43
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.56 E-value=4.9e-14 Score=143.53 Aligned_cols=120 Identities=18% Similarity=0.323 Sum_probs=98.8
Q ss_pred ceeEEEEEEeeecCCccccC--CCCCCcEEEEEEecC--CCceEeeeccCCC-CCCeeeeEEEEEEecCCCCEEEEEEEE
Q 016385 260 PVGTLEVKLVQAKGLTNKDL--IGKSDPYAVLFVRPL--PEKTKKSKTINND-LNPIWNEHFEFIVEDESTQHLVVRIYD 334 (390)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~--~g~~dpyv~v~~~~~--~~~~~kT~v~~~~-~nP~w~e~f~f~v~~~~~~~L~v~v~d 334 (390)
..+.|+|+|++|++|+..+. .+.+||||++.+.+. ...++||++++++ +||.|||+|.|.+..++...|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 57899999999999998873 688999999999632 2357899999987 999999999999987766799999999
Q ss_pred cCCCCCCceeEEEEEEccccCCCceeeEEEEcccccccCCCCeeeeEEEEE
Q 016385 335 DEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVRIK 385 (390)
Q Consensus 335 ~d~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~i~l~ 385 (390)
+|..++|++||++.+++.++..|. .|++|.... ...-..|.|.++
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~---g~~~~~~~L~v~ 619 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSKN---GDQHPSATLFVK 619 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECTT---SCEEEEEEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCCC---cCCCCceEEEEE
Confidence 999989999999999999998763 488886421 111245677665
No 44
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.54 E-value=1.7e-15 Score=141.26 Aligned_cols=111 Identities=32% Similarity=0.463 Sum_probs=94.2
Q ss_pred cceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCC--CceEeeeccCCCCCCeeeeEEEEEEecC--CCCEEEEEEEE
Q 016385 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYD 334 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~v~~~~~nP~w~e~f~f~v~~~--~~~~L~v~v~d 334 (390)
+..|.|+|+|++|++|+.+|..|.+||||++++.+.+ ..+++|+++++++||.|||+|.|.+... ....|.|+|||
T Consensus 149 ~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 228 (296)
T 1dqv_A 149 PTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVD 228 (296)
T ss_dssp TTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEE
T ss_pred cccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEe
Confidence 4679999999999999999999999999999997533 3578999999999999999999988654 24579999999
Q ss_pred cCCCCCCceeEEEEEEccccC-------------CCceeeEEEEcccc
Q 016385 335 DEGIQSSELIGCAQVRLCELE-------------PGKVKDVWLKLVKD 369 (390)
Q Consensus 335 ~d~~~~d~~lG~~~v~l~~l~-------------~~~~~~~w~~L~~~ 369 (390)
++.+++|++||++.++++++. ++.....|++|...
T Consensus 229 ~d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 229 YDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp CCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred CCCCCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 999999999999999998652 34566788888764
No 45
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.50 E-value=1.4e-15 Score=150.96 Aligned_cols=103 Identities=18% Similarity=0.332 Sum_probs=16.9
Q ss_pred ccceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCCceEeeeccCCC---CCCeeeeEEEEEEecCCCCEEEEEEEE
Q 016385 258 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINND---LNPIWNEHFEFIVEDESTQHLVVRIYD 334 (390)
Q Consensus 258 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~~---~nP~w~e~f~f~v~~~~~~~L~v~v~d 334 (390)
.+..|.|+|+|++|++|+++| ||||+++++ +....||++++++ +||.|||+|.|.+.+. ...|.++|||
T Consensus 7 ~r~~~~L~V~VieAk~L~~~d-----dpYv~v~l~--~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d 78 (483)
T 3bxj_A 7 RRVDNVLKLWIIEARELPPKK-----RYYCELCLD--DMLYARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYR 78 (483)
T ss_dssp EEEEECC----------------------------------------------------CCEECC---------------
T ss_pred ceeccEEEEEEEEcCCcCCCC-----CCeEEEEEC--CeEEeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEe
Confidence 467899999999999999776 999999986 2346789999998 9999999999987544 4689999999
Q ss_pred c-C---CCCCCceeEEEEEEccccCCCceeeEEEEccc
Q 016385 335 D-E---GIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (390)
Q Consensus 335 ~-d---~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~ 368 (390)
+ | ..++|++||++.++++++..+...+.|++|..
T Consensus 79 ~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~ 116 (483)
T 3bxj_A 79 DSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTL 116 (483)
T ss_dssp ----------------------------CCEECC----
T ss_pred cCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCC
Confidence 4 4 36789999999999999988888899999965
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.37 E-value=1.2e-12 Score=135.52 Aligned_cols=109 Identities=35% Similarity=0.558 Sum_probs=94.8
Q ss_pred ceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCC--CceEeeeccCCCCCCeeeeEEEEEEecC-CCCEEEEEEEEcC
Q 016385 260 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFIVEDE-STQHLVVRIYDDE 336 (390)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~v~~~~~nP~w~e~f~f~v~~~-~~~~L~v~v~d~d 336 (390)
..+.|.|++.+|++|.++|..|.+|||+++++.+.+ ..+++|+++++++||.|||+|.|.+... ....|.++|||+|
T Consensus 170 ~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d 249 (674)
T 3pfq_A 170 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 249 (674)
T ss_dssp CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECC
T ss_pred ccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecc
Confidence 457899999999999999999999999999996543 4578999999999999999999998754 3457999999999
Q ss_pred CCCCCceeEEEEEEccccCCCceeeEEEEcccc
Q 016385 337 GIQSSELIGCAQVRLCELEPGKVKDVWLKLVKD 369 (390)
Q Consensus 337 ~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~~ 369 (390)
..++|++||++.+++.++..+. .+.|+.|...
T Consensus 250 ~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~ 281 (674)
T 3pfq_A 250 LTSRNDFMGSLSFGISELQKAG-VDGWFKLLSQ 281 (674)
T ss_dssp SSSCCEECCBCCCBTTHHHHCC-EEEEEECBCT
T ss_pred cccccccccccccchhhhccCC-cccceeeccc
Confidence 9999999999999999987654 4899998653
No 47
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.18 E-value=8.9e-11 Score=122.59 Aligned_cols=111 Identities=18% Similarity=0.359 Sum_probs=84.7
Q ss_pred eeEEEEEEeeecCCccccCCCCCCcEEEEEEecC--CC-ceEeeeccCC-CCCCeeee-EEEEE-EecCCCCEEEEEEEE
Q 016385 261 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPL--PE-KTKKSKTINN-DLNPIWNE-HFEFI-VEDESTQHLVVRIYD 334 (390)
Q Consensus 261 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~-~~~kT~v~~~-~~nP~w~e-~f~f~-v~~~~~~~L~v~v~d 334 (390)
...|+|+|++|++|+.. .+||||++.+.+. .. ++++|+++++ ++||.||| +|.|. +..++...|+|+|||
T Consensus 724 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 34799999999999853 6899999999742 22 3578999875 59999999 69998 766666789999999
Q ss_pred cCCCCCCceeEEEEEEccccCCCceeeEEEEcccccccCCCCeeeeEEEEE
Q 016385 335 DEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVRIK 385 (390)
Q Consensus 335 ~d~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~G~i~l~ 385 (390)
+| +++||++.++|..|..|- .+++|.... ...-..|.|.+.
T Consensus 800 ~d----ddfiG~~~lpL~~L~~Gy---R~vpL~~~~---g~~l~~atLfv~ 840 (885)
T 3ohm_B 800 EG----GKFVGHRILPVSAIRSGY---HYVCLRNEA---NQPLCLPALLIY 840 (885)
T ss_dssp TT----TEEEEEEEEETTTCCCEE---EEEEEECTT---SCEEEEEEEEEE
T ss_pred CC----ccEEeeEEEEHHHcCCCc---eEEEecCCC---CCccCceEEEEE
Confidence 86 789999999999998763 356775421 112245676665
No 48
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.18 E-value=1.3e-10 Score=120.80 Aligned_cols=97 Identities=27% Similarity=0.451 Sum_probs=79.7
Q ss_pred eeEEEEEEeeecCCccccCCCCCCcEEEEEEecCC--C--ceEeeeccCC-CCCCeeeeE-EEEE-EecCCCCEEEEEEE
Q 016385 261 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--E--KTKKSKTINN-DLNPIWNEH-FEFI-VEDESTQHLVVRIY 333 (390)
Q Consensus 261 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~--~~~kT~v~~~-~~nP~w~e~-f~f~-v~~~~~~~L~v~v~ 333 (390)
.+.|+|+|++|++|+.+ .+||||++.+.+.+ . ++++|+++++ ++||.|||+ |.|. +..++...|+|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 47899999999999853 68999999987322 2 4678999875 699999998 9998 76666679999999
Q ss_pred EcCCCCCCceeEEEEEEccccCCCceeeEEEEccc
Q 016385 334 DDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (390)
Q Consensus 334 d~d~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~ 368 (390)
|++ ++++|++.++|+.|..|- .+++|..
T Consensus 725 D~d----ddfiG~~~ipL~~L~~Gy---R~vpL~~ 752 (816)
T 3qr0_A 725 EEN----GKFIGHRVMPLDGIKPGY---RHVPLRN 752 (816)
T ss_dssp ETT----SCEEEEEEEESTTCCCEE---EEEEEEC
T ss_pred ecC----CCeeeEEEEEHHHcCCcc---eEEEEeC
Confidence 985 789999999999998763 3567754
No 49
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.16 E-value=2.2e-10 Score=119.51 Aligned_cols=98 Identities=20% Similarity=0.363 Sum_probs=80.4
Q ss_pred ceeEEEEEEeeecCCccccCCCCCCcEEEEEEecC--C-CceEeee-ccC-CCCCCeeee-EEEE-EEecCCCCEEEEEE
Q 016385 260 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPL--P-EKTKKSK-TIN-NDLNPIWNE-HFEF-IVEDESTQHLVVRI 332 (390)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~-~~~~kT~-v~~-~~~nP~w~e-~f~f-~v~~~~~~~L~v~v 332 (390)
..|.|.|+|++|++|+. +.+||||++.+.+. . .+++||+ +++ +++||.||| +|.| .+..++...|+|+|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 46899999999999984 46899999999532 1 2467899 776 569999999 6999 88766667999999
Q ss_pred EEcCCCCCCceeEEEEEEccccCCCceeeEEEEccc
Q 016385 333 YDDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (390)
Q Consensus 333 ~d~d~~~~d~~lG~~~v~l~~l~~~~~~~~w~~L~~ 368 (390)
||+| +++||++.++++.|.+|. .|++|..
T Consensus 752 ~D~d----~d~iG~~~ipl~~L~~G~---r~v~L~~ 780 (799)
T 2zkm_X 752 MEEG----NKFLGHRIIPINALNSGY---HHLCLHS 780 (799)
T ss_dssp EETT----TEEEEEEEEEGGGBCCEE---EEEEEEC
T ss_pred EEeC----CCccceEeeehhhcCCCc---EEEeccC
Confidence 9986 789999999999998763 4677754
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.00 E-value=6.7e-09 Score=81.43 Aligned_cols=110 Identities=12% Similarity=0.182 Sum_probs=79.7
Q ss_pred ceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCC-CceEee-eccCCCCCCeeeeEEEEEEecCCCCEEEEEEEEcCC
Q 016385 260 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP-EKTKKS-KTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEG 337 (390)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~-~~~~kT-~v~~~~~nP~w~e~f~f~v~~~~~~~L~v~v~d~d~ 337 (390)
..+.|+|.+.+..--.-+......||||.+.+...- ....+| ...++|..|.|||+|.-.+. +.+.|.+.|++...
T Consensus 4 m~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~--~Gr~l~i~Vfh~a~ 81 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIY--EGRVIQIVLMRAAE 81 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECC--TTCEEEEEEEEETT
T ss_pred cCccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeee--CCEEEEEEEEcCCC
Confidence 345788888665532211222358999999986211 112354 66788999999999988886 45699999996543
Q ss_pred CCCCceeEEEEEEccccC-----CCceeeEEEEcccccccCCCCeeeeEEEEE
Q 016385 338 IQSSELIGCAQVRLCELE-----PGKVKDVWLKLVKDLDVQRDTKYRGQVRIK 385 (390)
Q Consensus 338 ~~~d~~lG~~~v~l~~l~-----~~~~~~~w~~L~~~~~~~~~~~~~G~i~l~ 385 (390)
++++.|.+++.+|. .+...+.|+.|+ +.|+|++.
T Consensus 82 ----~fvAn~tV~~edL~~~c~~~~g~~e~WvdLe----------P~Gkl~~~ 120 (126)
T 1yrk_A 82 ----EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQ----------PQAKVLMS 120 (126)
T ss_dssp ----EEEEEEEEEHHHHHHHHHTTTTEEEEEEECB----------SSCEEEEE
T ss_pred ----CeeeEEEEEHHHHHhhhccCCCceEEEEecc----------cCcEEEEE
Confidence 89999999999996 456779999995 46888876
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.87 E-value=1.1e-08 Score=81.31 Aligned_cols=110 Identities=15% Similarity=0.299 Sum_probs=79.1
Q ss_pred ceeEEEEEEeeecCCcccc-CCCCCCcEEEEEEecCC-CceEee-eccCCCCCCeeeeEEEEEEecCCCCEEEEEEEEcC
Q 016385 260 PVGTLEVKLVQAKGLTNKD-LIGKSDPYAVLFVRPLP-EKTKKS-KTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDE 336 (390)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d-~~g~~dpyv~v~~~~~~-~~~~kT-~v~~~~~nP~w~e~f~f~v~~~~~~~L~v~v~d~d 336 (390)
..+.|+|.+.+..--+.+. .....||||.+.+...- ....+| ...++|..|.|||.|.-.+. +.+.|.+.|++..
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~--~Gr~l~i~Vfh~a 85 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHIN--KGRVMQIIVKGKN 85 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCC--SSCEEEEEEECSS
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEE--CCeEEEEEEEcCC
Confidence 4567888887765433221 12358999999987311 012455 55667899999999988776 4568999999543
Q ss_pred CCCCCceeEEEEEEccccC-----CCceeeEEEEcccccccCCCCeeeeEEEEE
Q 016385 337 GIQSSELIGCAQVRLCELE-----PGKVKDVWLKLVKDLDVQRDTKYRGQVRIK 385 (390)
Q Consensus 337 ~~~~d~~lG~~~v~l~~l~-----~~~~~~~w~~L~~~~~~~~~~~~~G~i~l~ 385 (390)
. ++++.|.+++.+|. .+...+.|+.|++ .|+|++.
T Consensus 86 ~----~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP----------~Gkl~v~ 125 (138)
T 2enj_A 86 V----DLISETTVELYSLAERCRKNNGKTEIWLELKP----------QGRMLMN 125 (138)
T ss_dssp C----SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS----------SCEEEEE
T ss_pred C----CeeeEEEEEHHHHHhhhccCCCceEEEEeccc----------CcEEEEE
Confidence 2 89999999999996 4556799999954 6777776
No 52
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=94.40 E-value=0.83 Score=39.40 Aligned_cols=56 Identities=21% Similarity=0.249 Sum_probs=42.8
Q ss_pred ceEeeeccCCCCCCeeeeEEEEEEecC--CCCEEEEEEEEcCCC----CCCceeEEEEEEcc
Q 016385 297 KTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYDDEGI----QSSELIGCAQVRLC 352 (390)
Q Consensus 297 ~~~kT~v~~~~~nP~w~e~f~f~v~~~--~~~~L~v~v~d~d~~----~~d~~lG~~~v~l~ 352 (390)
..++|.+...+.+|.|+|++.+.+... ....|.|++++.... ..+..+|.+.+||-
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 357788888899999999999888644 456899999875421 22357899999984
No 53
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=91.09 E-value=1.8 Score=35.11 Aligned_cols=121 Identities=12% Similarity=0.137 Sum_probs=80.6
Q ss_pred cceeEEEEEEeeecCCccc-cCCCCCCcEEEEEEecCCCceEeeeccCCCCCCeeeeEEEEEEecC-------CCCEEEE
Q 016385 259 KPVGTLEVKLVQAKGLTNK-DLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE-------STQHLVV 330 (390)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~-d~~g~~dpyv~v~~~~~~~~~~kT~v~~~~~nP~w~e~f~f~v~~~-------~~~~L~v 330 (390)
+..+.+.|+|.++.--+.. ...+..+|..-+.+.--.-+.+.|.+.. +.+|.+|.+-.+.|.-. .+..+.+
T Consensus 15 ~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~l 93 (156)
T 2yrb_A 15 RGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITL 93 (156)
T ss_dssp SSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEE
T ss_pred CCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEE
Confidence 5678999999988732111 1124467887777765556778888776 78999999888887432 3447889
Q ss_pred EEEEcCCCCCCceeEEEEEEccccCCCce-eeEEEEcccccccCCCC-eeeeEEEEE
Q 016385 331 RIYDDEGIQSSELIGCAQVRLCELEPGKV-KDVWLKLVKDLDVQRDT-KYRGQVRIK 385 (390)
Q Consensus 331 ~v~d~d~~~~d~~lG~~~v~l~~l~~~~~-~~~w~~L~~~~~~~~~~-~~~G~i~l~ 385 (390)
+++.... ...+.+|.+++++.++..... .-.-.+|... .++ ..-|+|.+.
T Consensus 94 ELhqa~g-~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~----~g~~~~~G~Leyw 145 (156)
T 2yrb_A 94 EVHQAYS-TEYETIAACQLKFHEILEKSGRIFCTASLIGT----KGDIPNFGTVEYW 145 (156)
T ss_dssp EEEEECS-SCEEEEEEEEECCSHHHHCCSCEEEEEEECBS----SSCCTTSEEEEEE
T ss_pred EEEEeeC-CCceEEEEEEEEhHHhhCcCCceEEEEEEEcC----CCCcceEEEEEEE
Confidence 9988764 356799999999999854332 3344455432 122 356877765
No 54
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=87.06 E-value=3.8 Score=43.28 Aligned_cols=92 Identities=17% Similarity=0.246 Sum_probs=60.4
Q ss_pred ceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCC---ceEeeeccCCCCCCeeeeEEEEEEe--c-CCCCEEEEEEE
Q 016385 260 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE---KTKKSKTINNDLNPIWNEHFEFIVE--D-ESTQHLVVRIY 333 (390)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~v~~~~~nP~w~e~f~f~v~--~-~~~~~L~v~v~ 333 (390)
-...+.|+|.++.++... ..++-|+.+.+-..+. ....|+.+....+|.|||...|.+. + |.+..|.+.+|
T Consensus 215 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 291 (940)
T 2wxf_A 215 LEQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALY 291 (940)
T ss_dssp CCSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred cCCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEE
Confidence 345789999999988643 3467888776632221 1233444444678999999888775 2 45679999999
Q ss_pred EcCCC--C----------CCceeEEEEEEcccc
Q 016385 334 DDEGI--Q----------SSELIGCAQVRLCEL 354 (390)
Q Consensus 334 d~d~~--~----------~d~~lG~~~v~l~~l 354 (390)
+.... + .+..+|.+.+++-+-
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 292 AVVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EEC----------------CEEEEEEEEESBCT
T ss_pred EecCCccCccccccccccccceEEEEeeeEECC
Confidence 96331 1 245999999998663
No 55
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=82.02 E-value=12 Score=40.00 Aligned_cols=93 Identities=16% Similarity=0.228 Sum_probs=61.0
Q ss_pred ceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCC---ceEeeeccCCCCCCeeeeEEEEEEe--c-CCCCEEEEEEE
Q 016385 260 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE---KTKKSKTINNDLNPIWNEHFEFIVE--D-ESTQHLVVRIY 333 (390)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~v~~~~~nP~w~e~f~f~v~--~-~~~~~L~v~v~ 333 (390)
-...++|+|.++.++... .....+-|+.+.+--.+. ...+|+.+. ..+|.|||...|.+. + |....|.+.+|
T Consensus 353 ~~~~f~v~i~~~~~~n~~-~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~ 430 (1091)
T 3hhm_A 353 INSALRIKILCATYVNVN-IRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSIC 430 (1091)
T ss_dssp CCSEEEEEEEEESCCCCC-CSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEEC
T ss_pred CCCCEEEEEEEecCCCCC-ccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEE
Confidence 345789999999887532 223467888887752222 223344333 457889999888875 2 45679999999
Q ss_pred EcCCC----CCCceeEEEEEEcccc
Q 016385 334 DDEGI----QSSELIGCAQVRLCEL 354 (390)
Q Consensus 334 d~d~~----~~d~~lG~~~v~l~~l 354 (390)
+.... ..+..+|.+.+++-+-
T Consensus 431 ~~~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 431 SVKGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCCCC-------CCEEEEEESBCT
T ss_pred EecCccCcccccceeEEeeeeeEcc
Confidence 86542 1345899999999664
No 56
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=71.30 E-value=18 Score=38.21 Aligned_cols=93 Identities=13% Similarity=0.133 Sum_probs=56.1
Q ss_pred eeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCCc--eEeeeccCCCCCCeeeeEEEEEEe--c-CCCCEEEEEEEEc
Q 016385 261 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEK--TKKSKTINNDLNPIWNEHFEFIVE--D-ESTQHLVVRIYDD 335 (390)
Q Consensus 261 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~--~~kT~v~~~~~nP~w~e~f~f~v~--~-~~~~~L~v~v~d~ 335 (390)
...++|+|..+....... ...++-|+.+.+--.+.. ..+|..+.-+.+|.|||...|.+. + |.+..|.+++|+.
T Consensus 217 ~~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp CSEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred cCceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 346788888876422111 234577777665321211 123333334567999999888764 2 4567999999985
Q ss_pred CCC----------------CCCceeEEEEEEcccc
Q 016385 336 EGI----------------QSSELIGCAQVRLCEL 354 (390)
Q Consensus 336 d~~----------------~~d~~lG~~~v~l~~l 354 (390)
... +++..+|.+.+++-+-
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 296 AKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp EC--------------------CEEEEEEEESBCT
T ss_pred ccCccccccccccccccccccceeEEEEeeeeecC
Confidence 321 1345899999998664
No 57
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=68.70 E-value=6.9 Score=41.98 Aligned_cols=92 Identities=17% Similarity=0.202 Sum_probs=58.0
Q ss_pred ceeEEEEEEeeecCCccccCCCCCCcEEEEEEecCCC---ceEeeeccCCCCCCeeeeEEEEEEec---CCCCEEEEEEE
Q 016385 260 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE---KTKKSKTINNDLNPIWNEHFEFIVED---ESTQHLVVRIY 333 (390)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~v~~~~~nP~w~e~f~f~v~~---~~~~~L~v~v~ 333 (390)
-...++|+|.++.++... ..++-|+.+.+-..+. ....|+.+....+|.|||...|.+.- |.+..|.+.+|
T Consensus 351 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~ 427 (1092)
T 2y3a_A 351 NNNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVY 427 (1092)
T ss_dssp CCSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECC
T ss_pred cCCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEE
Confidence 346789999999988643 3467777655431111 12234444446789999998887652 35679999999
Q ss_pred EcCCC----------------------CCCceeEEEEEEcccc
Q 016385 334 DDEGI----------------------QSSELIGCAQVRLCEL 354 (390)
Q Consensus 334 d~d~~----------------------~~d~~lG~~~v~l~~l 354 (390)
+.... +.+..+|.+.+++-+-
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 470 (1092)
T 2y3a_A 428 AVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDF 470 (1092)
T ss_dssp CC------------------------------CCEEEEESBCT
T ss_pred EecCccccccccccccccccccccccccccceeEEEeeeeECC
Confidence 86310 1134899999998664
No 58
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=63.53 E-value=2.1 Score=25.80 Aligned_cols=20 Identities=20% Similarity=0.692 Sum_probs=12.4
Q ss_pred hhhHHHHHHHHHHhhheeee
Q 016385 4 FFGLVVGLVVGLGIIVGFVR 23 (390)
Q Consensus 4 ~~g~~~g~~~gl~l~~~~~~ 23 (390)
+-|+++|.++|+++..+..+
T Consensus 13 IAGiVvG~v~gv~li~~l~~ 32 (38)
T 2k1k_A 13 IVAVIFGLLLGAALLLGILV 32 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeehHHHHHHHHHHHHHH
Confidence 45677777777665555443
No 59
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=53.90 E-value=3.1 Score=25.95 Aligned_cols=11 Identities=36% Similarity=0.422 Sum_probs=4.8
Q ss_pred hHHHHHHHHHH
Q 016385 6 GLVVGLVVGLG 16 (390)
Q Consensus 6 g~~~g~~~gl~ 16 (390)
|++.|++.-..
T Consensus 16 gVVgGv~~~~i 26 (44)
T 2ks1_B 16 GMVGALLLLLV 26 (44)
T ss_dssp HHHHHHHHHHH
T ss_pred ehhHHHHHHHH
Confidence 44444444333
No 60
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=48.47 E-value=3.5 Score=25.65 Aligned_cols=8 Identities=38% Similarity=0.758 Sum_probs=3.6
Q ss_pred hhHHHHHH
Q 016385 5 FGLVVGLV 12 (390)
Q Consensus 5 ~g~~~g~~ 12 (390)
-|.++|++
T Consensus 15 a~~vVGvl 22 (44)
T 2jwa_A 15 ISAVVGIL 22 (44)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 34444533
No 61
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=46.71 E-value=3.9 Score=25.46 Aligned_cols=7 Identities=29% Similarity=0.733 Sum_probs=2.6
Q ss_pred HHHHHHH
Q 016385 7 LVVGLVV 13 (390)
Q Consensus 7 ~~~g~~~ 13 (390)
++-|+++
T Consensus 16 VVgGv~~ 22 (44)
T 2l2t_A 16 VIGGLFI 22 (44)
T ss_dssp HHHHHHH
T ss_pred ehHHHHH
Confidence 3333433
No 62
>1ewf_A BPI, bactericidal/permeability-increasing protein; lipid-binding, lipopolysaccharide-binding, antibiotic; HET: PC1; 1.70A {Homo sapiens} SCOP: d.83.1.1 d.83.1.1 PDB: 1bp1_A*
Probab=46.41 E-value=1.9e+02 Score=27.22 Aligned_cols=20 Identities=5% Similarity=0.208 Sum_probs=16.0
Q ss_pred eeeEEEEEEEEEEEEEEEEe
Q 016385 164 ALPVQVKNIGFTGVFRLIFR 183 (390)
Q Consensus 164 ~~~v~v~~~~~~g~~rv~l~ 183 (390)
.+.+.++++.+.+.+|+...
T Consensus 103 ~~~~~v~~v~i~~~~~l~~~ 122 (456)
T 1ewf_A 103 NFDLSIEGMSISADLKLGSN 122 (456)
T ss_dssp EEEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEeeEEEEEEEEEeec
Confidence 56778888888888888765
No 63
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=23.21 E-value=22 Score=24.04 Aligned_cols=14 Identities=43% Similarity=0.795 Sum_probs=6.8
Q ss_pred HHHHHHHHHHhhhe
Q 016385 7 LVVGLVVGLGIIVG 20 (390)
Q Consensus 7 ~~~g~~~gl~l~~~ 20 (390)
+++|..+|++++..
T Consensus 12 ivlGg~~~lll~~g 25 (70)
T 2klu_A 12 IVLGGVAGLLLFIG 25 (70)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHH
Confidence 45555555544443
No 64
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=22.20 E-value=43 Score=20.51 Aligned_cols=20 Identities=10% Similarity=0.381 Sum_probs=12.2
Q ss_pred hhhHHHHH-HHHHHhhheeee
Q 016385 4 FFGLVVGL-VVGLGIIVGFVR 23 (390)
Q Consensus 4 ~~g~~~g~-~~gl~l~~~~~~ 23 (390)
+.|.+.|+ ++|+++++.|..
T Consensus 13 v~gvi~~ivliGl~lLliwk~ 33 (43)
T 2k9j_B 13 LLSVMGAILLIGLAALLIWKL 33 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 35666663 367777776653
No 65
>1q90_G Cytochrome B6F complex subunit PETG; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.26.1
Probab=21.58 E-value=32 Score=20.17 Aligned_cols=17 Identities=35% Similarity=0.776 Sum_probs=9.9
Q ss_pred chhhHHHHH----HHHHHhhh
Q 016385 3 FFFGLVVGL----VVGLGIIV 19 (390)
Q Consensus 3 ~~~g~~~g~----~~gl~l~~ 19 (390)
+++|+++|+ ++|++...
T Consensus 5 lL~GIVlGlipvtlaGLfv~A 25 (37)
T 1q90_G 5 LLCGIVLGLVPVTIAGLFVTA 25 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHhhHHHHHHHHHHHH
Confidence 456666665 56666543
No 66
>1vf5_G Protein PET G; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.23.26.1 PDB: 2d2c_G* 2e74_G* 2e75_G* 2e76_G* 2zt9_G*
Probab=20.45 E-value=34 Score=20.07 Aligned_cols=17 Identities=35% Similarity=0.454 Sum_probs=7.4
Q ss_pred chhhHHHH----HHHHHHhhh
Q 016385 3 FFFGLVVG----LVVGLGIIV 19 (390)
Q Consensus 3 ~~~g~~~g----~~~gl~l~~ 19 (390)
+++|+++| .++|++...
T Consensus 5 lL~GIVlGlipvtl~GLfv~A 25 (37)
T 1vf5_G 5 LLDGLVLGLVFATLGGLFYAA 25 (37)
T ss_dssp ----CHHHHHHHHHHHHTHHH
T ss_pred hhhhHHHhhHHHHHHHHHHHH
Confidence 44555555 456766543
Done!