Query 016386
Match_columns 390
No_of_seqs 262 out of 2052
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 12:43:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016386.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016386hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qww_A SET and MYND domain-con 100.0 2.3E-56 8E-61 448.7 27.8 330 3-366 25-357 (433)
2 3n71_A Histone lysine methyltr 100.0 3.2E-56 1.1E-60 454.3 29.2 327 3-367 25-369 (490)
3 3qwp_A SET and MYND domain-con 100.0 1.5E-54 5.1E-59 435.8 23.4 318 3-367 23-347 (429)
4 3rq4_A Histone-lysine N-methyl 99.5 1.5E-15 5.2E-20 139.7 3.8 80 161-251 155-236 (247)
5 3s8p_A Histone-lysine N-methyl 99.4 2.3E-14 7.8E-19 133.3 3.3 81 160-251 183-265 (273)
6 1n3j_A A612L, histone H3 lysin 99.3 8.3E-13 2.8E-17 108.7 2.8 54 175-228 57-112 (119)
7 2odd_A Protein CBFA2T1; MYND z 99.3 9E-13 3.1E-17 96.2 1.4 59 3-71 2-60 (64)
8 2w5y_A Histone-lysine N-methyl 99.1 3.8E-11 1.3E-15 106.8 5.6 59 182-249 124-188 (192)
9 3f9x_A Histone-lysine N-methyl 99.0 1.5E-10 5.1E-15 100.7 3.8 54 183-236 108-165 (166)
10 3ope_A Probable histone-lysine 99.0 4.2E-10 1.4E-14 102.5 5.0 55 183-246 147-205 (222)
11 3ooi_A Histone-lysine N-methyl 98.9 5E-10 1.7E-14 102.7 4.7 54 183-246 166-223 (232)
12 3h6l_A Histone-lysine N-methyl 98.8 2.1E-09 7.1E-14 100.9 5.3 54 183-246 191-248 (278)
13 3smt_A Histone-lysine N-methyl 98.8 2.5E-09 8.5E-14 108.6 5.2 93 147-245 237-330 (497)
14 1ml9_A Histone H3 methyltransf 98.8 3.2E-09 1.1E-13 101.1 4.6 63 183-245 221-292 (302)
15 3qxy_A N-lysine methyltransfer 98.8 6.5E-09 2.2E-13 104.4 6.8 92 147-244 183-278 (449)
16 3hna_A Histone-lysine N-methyl 98.8 1.3E-09 4.4E-14 102.9 1.5 55 183-245 217-279 (287)
17 2f69_A Histone-lysine N-methyl 98.8 1.9E-09 6.5E-14 100.3 2.4 45 183-227 187-236 (261)
18 1mvh_A Cryptic LOCI regulator 98.7 1.2E-08 4.1E-13 96.9 5.3 45 182-226 213-265 (299)
19 2r3a_A Histone-lysine N-methyl 98.7 1.6E-08 5.4E-13 96.0 5.2 44 182-225 215-266 (300)
20 3bo5_A Histone-lysine N-methyl 98.6 2.3E-08 8E-13 94.4 5.5 46 182-227 205-255 (290)
21 1h3i_A Histone H3 lysine 4 spe 98.6 1.5E-08 5.1E-13 96.1 4.2 43 183-225 241-288 (293)
22 2dj8_A Protein CBFA2T1; zinc f 98.6 1.8E-08 6.1E-13 72.2 2.0 45 26-71 14-58 (60)
23 2qpw_A PR domain zinc finger p 98.6 5.9E-08 2E-12 82.6 5.4 45 183-227 100-147 (149)
24 2jw6_A Deformed epidermal auto 98.5 2.5E-08 8.5E-13 69.3 2.4 44 24-68 6-49 (52)
25 2od1_A Protein CBFA2T1; zinc f 98.4 7.4E-08 2.5E-12 68.9 1.6 53 16-70 3-55 (60)
26 2d8q_A BLU protein, zinc finge 98.3 1.8E-07 6.3E-12 68.9 2.8 45 27-72 15-59 (70)
27 2h21_A Ribulose-1,5 bisphospha 98.3 7.4E-07 2.5E-11 89.1 6.9 89 147-244 158-257 (440)
28 3db5_A PR domain zinc finger p 97.6 5.8E-05 2E-09 64.1 5.1 45 182-226 97-144 (151)
29 3ep0_A PR domain zinc finger p 97.4 0.00013 4.6E-09 63.0 5.1 43 183-225 102-147 (170)
30 3dal_A PR domain zinc finger p 97.1 0.00036 1.2E-08 61.6 4.5 42 183-224 132-176 (196)
31 3ihx_A PR domain zinc finger p 96.8 0.00088 3E-08 56.8 4.1 43 182-224 96-141 (152)
32 3ray_A PR domain-containing pr 96.5 0.0021 7.3E-08 58.1 4.5 44 182-225 140-186 (237)
33 2yqq_A Zinc finger HIT domain- 94.0 0.034 1.2E-06 38.4 2.8 37 27-69 12-48 (56)
34 1x4s_A Protein FON, zinc finge 93.3 0.028 9.4E-07 39.2 1.3 36 27-68 11-49 (59)
35 3qww_A SET and MYND domain-con 91.8 0.32 1.1E-05 48.0 7.3 53 317-369 350-402 (433)
36 3qwp_A SET and MYND domain-con 91.1 0.35 1.2E-05 47.7 6.7 51 319-369 341-391 (429)
37 3n71_A Histone lysine methyltr 91.0 0.4 1.4E-05 48.1 7.3 52 318-369 362-413 (490)
38 1pft_A TFIIB, PFTFIIBN; N-term 72.4 2.2 7.6E-05 28.2 2.4 30 265-296 5-35 (50)
39 2xev_A YBGF; tetratricopeptide 72.1 9.2 0.00032 28.8 6.5 45 319-368 51-95 (129)
40 1lv3_A Hypothetical protein YA 71.5 1.7 5.7E-05 31.1 1.6 30 28-59 10-39 (68)
41 1dl6_A Transcription factor II 71.2 2 6.8E-05 29.7 2.0 36 259-296 5-41 (58)
42 3edt_B KLC 2, kinesin light ch 67.4 16 0.00056 31.3 7.8 54 314-367 134-187 (283)
43 4gcn_A Protein STI-1; structur 66.7 20 0.00067 27.7 7.4 46 313-366 14-59 (127)
44 1vq8_Z 50S ribosomal protein L 66.5 1.5 5E-05 32.8 0.5 30 265-296 27-56 (83)
45 4gco_A Protein STI-1; structur 65.7 17 0.00059 28.1 6.9 46 312-365 18-63 (126)
46 3rkv_A Putative peptidylprolyl 65.7 13 0.00045 29.7 6.4 63 305-367 9-81 (162)
47 3qky_A Outer membrane assembly 65.5 12 0.00041 32.6 6.5 53 309-366 17-69 (261)
48 2xev_A YBGF; tetratricopeptide 64.6 18 0.00062 27.1 6.8 35 319-358 88-122 (129)
49 3upv_A Heat shock protein STI1 64.3 20 0.00068 27.0 7.0 38 320-365 51-88 (126)
50 3edt_B KLC 2, kinesin light ch 63.5 17 0.00058 31.2 7.1 52 316-367 94-145 (283)
51 2dba_A Smooth muscle cell asso 63.4 19 0.00063 27.5 6.7 46 315-365 36-81 (148)
52 2yhc_A BAMD, UPF0169 lipoprote 63.0 14 0.00047 31.6 6.4 41 318-363 52-92 (225)
53 2l6j_A TPR repeat-containing p 62.9 23 0.00079 25.5 6.9 42 319-365 50-94 (111)
54 2v6y_A AAA family ATPase, P60 58.1 29 0.001 25.4 6.4 37 303-339 7-43 (83)
55 3nf1_A KLC 1, kinesin light ch 57.8 31 0.0011 30.1 7.9 55 314-368 160-214 (311)
56 2cpt_A SKD1 protein, vacuolar 57.3 39 0.0013 26.6 7.4 38 304-341 15-52 (117)
57 3ma5_A Tetratricopeptide repea 54.3 35 0.0012 24.8 6.5 46 314-367 14-59 (100)
58 3nf1_A KLC 1, kinesin light ch 53.9 32 0.0011 29.9 7.3 54 314-367 34-87 (311)
59 2w2u_A Hypothetical P60 katani 53.4 23 0.0008 26.1 5.1 37 303-339 15-51 (83)
60 3sz7_A HSC70 cochaperone (SGT) 51.6 39 0.0013 26.8 6.9 39 319-365 57-95 (164)
61 3k9i_A BH0479 protein; putativ 50.2 49 0.0017 24.5 6.9 45 314-366 34-78 (117)
62 2fbn_A 70 kDa peptidylprolyl i 50.1 59 0.002 26.6 8.1 61 305-367 36-106 (198)
63 2kc7_A BFR218_protein; tetratr 50.1 28 0.00097 24.7 5.3 16 320-335 13-28 (99)
64 1elw_A TPR1-domain of HOP; HOP 49.8 41 0.0014 24.0 6.3 40 319-366 50-89 (118)
65 2yhc_A BAMD, UPF0169 lipoprote 48.8 39 0.0013 28.6 6.8 53 314-371 154-206 (225)
66 3gyz_A Chaperone protein IPGC; 48.6 43 0.0015 27.0 6.7 14 352-365 107-120 (151)
67 2pk7_A Uncharacterized protein 48.5 10 0.00036 27.0 2.4 34 261-296 4-37 (69)
68 2yrc_A Protein transport prote 48.2 5.8 0.0002 27.5 1.0 31 265-295 9-43 (59)
69 2v6x_A Vacuolar protein sortin 47.8 72 0.0025 23.2 7.2 35 305-339 11-45 (85)
70 3vtx_A MAMA; tetratricopeptide 46.6 28 0.00095 28.1 5.3 43 317-367 15-57 (184)
71 1wfd_A Hypothetical protein 15 46.5 75 0.0026 23.7 7.2 37 304-340 12-48 (93)
72 3ffl_A Anaphase-promoting comp 44.5 74 0.0025 26.7 7.5 64 307-370 63-143 (167)
73 2jny_A Uncharacterized BCR; st 44.4 12 0.00042 26.5 2.2 34 261-296 6-39 (67)
74 2xcb_A PCRH, regulatory protei 42.6 68 0.0023 24.7 6.9 40 320-367 65-104 (142)
75 1ihg_A Cyclophilin 40; ppiase 42.4 54 0.0019 30.7 7.2 68 300-367 216-291 (370)
76 1a17_A Serine/threonine protei 41.6 91 0.0031 23.9 7.6 24 312-335 18-41 (166)
77 4a5x_A MITD1, MIT domain-conta 41.3 1E+02 0.0035 22.6 7.4 34 307-340 16-49 (86)
78 3qou_A Protein YBBN; thioredox 41.3 57 0.0019 29.0 6.9 51 308-366 118-168 (287)
79 2hr2_A Hypothetical protein; a 41.1 39 0.0013 28.1 5.3 60 306-365 10-73 (159)
80 2vgx_A Chaperone SYCD; alterna 40.1 75 0.0026 25.0 6.9 41 319-367 67-107 (148)
81 2jr6_A UPF0434 protein NMA0874 39.9 12 0.0004 26.6 1.5 33 262-296 5-37 (68)
82 2js4_A UPF0434 protein BB2007; 39.8 13 0.00043 26.7 1.7 33 262-296 5-37 (70)
83 2hf1_A Tetraacyldisaccharide-1 38.8 11 0.00039 26.7 1.3 33 262-296 5-37 (68)
84 2vyi_A SGTA protein; chaperone 38.6 1.1E+02 0.0036 22.0 7.3 41 319-367 58-98 (131)
85 1wvo_A Sialic acid synthase; a 38.0 14 0.00047 27.1 1.7 19 204-222 8-26 (79)
86 1wfp_A Zinc finger (AN1-like) 37.8 18 0.00062 26.1 2.2 26 26-53 24-51 (74)
87 1hxi_A PEX5, peroxisome target 37.7 74 0.0025 24.0 6.2 41 319-367 63-103 (121)
88 3ro3_A PINS homolog, G-protein 37.5 85 0.0029 23.6 6.7 46 319-366 61-106 (164)
89 4gcn_A Protein STI-1; structur 37.5 99 0.0034 23.4 7.0 54 314-368 49-102 (127)
90 4b4t_Q 26S proteasome regulato 37.4 36 0.0012 31.7 5.1 59 310-368 7-74 (434)
91 1y02_A CARP2, FYVE-ring finger 36.8 13 0.00046 29.5 1.6 35 21-57 13-51 (120)
92 2v5f_A Prolyl 4-hydroxylase su 36.6 1.1E+02 0.0039 22.3 7.0 55 311-366 9-63 (104)
93 1pg5_B Aspartate carbamoyltran 36.5 19 0.00066 30.3 2.5 19 283-301 141-159 (168)
94 3ro3_A PINS homolog, G-protein 36.5 1E+02 0.0035 23.1 7.0 50 317-368 99-148 (164)
95 3uej_A NPKC-delta, protein kin 36.2 19 0.00066 24.9 2.2 44 13-58 6-54 (65)
96 3q49_B STIP1 homology and U bo 35.8 82 0.0028 23.4 6.3 40 319-366 55-94 (137)
97 1wfh_A Zinc finger (AN1-like) 35.6 20 0.00069 25.1 2.1 26 26-53 14-41 (64)
98 1elr_A TPR2A-domain of HOP; HO 35.5 1E+02 0.0034 22.2 6.6 47 312-366 9-55 (131)
99 3ulq_A Response regulator aspa 35.5 1E+02 0.0035 28.1 8.0 52 313-366 109-160 (383)
100 3j20_Y 30S ribosomal protein S 34.8 14 0.00048 24.5 1.2 25 267-294 21-46 (50)
101 2be7_D Aspartate carbamoyltran 33.7 14 0.00048 30.7 1.2 18 284-301 133-150 (153)
102 2l6j_A TPR repeat-containing p 33.1 1.3E+02 0.0043 21.2 7.1 49 309-365 6-54 (111)
103 1na3_A Designed protein CTPR2; 33.0 1.1E+02 0.0038 20.6 6.6 41 317-365 19-59 (91)
104 1elr_A TPR2A-domain of HOP; HO 32.3 1.1E+02 0.0038 22.0 6.4 49 317-366 48-96 (131)
105 3qky_A Outer membrane assembly 32.3 86 0.0029 26.8 6.5 45 312-361 57-101 (261)
106 2lni_A Stress-induced-phosphop 31.8 72 0.0024 23.3 5.2 44 317-368 60-103 (133)
107 4ga2_A E3 SUMO-protein ligase 31.3 88 0.003 24.5 5.9 39 319-365 43-81 (150)
108 2con_A RUH-035 protein, NIN on 31.1 22 0.00074 26.1 1.7 22 27-48 15-39 (79)
109 3urz_A Uncharacterized protein 30.9 93 0.0032 25.8 6.3 56 307-367 4-72 (208)
110 4a17_Y RPL37A, 60S ribosomal p 30.8 38 0.0013 26.0 3.1 29 265-295 36-64 (103)
111 1brv_A Protein G, BRSV-G regio 30.5 16 0.00056 21.7 0.8 21 37-57 11-31 (32)
112 4a1s_A PINS, partner of inscut 30.4 1.3E+02 0.0045 27.3 7.8 57 306-367 47-104 (411)
113 1gh9_A 8.3 kDa protein (gene M 30.3 11 0.00036 27.2 -0.0 30 265-298 4-33 (71)
114 1wg2_A Zinc finger (AN1-like) 30.2 27 0.00092 24.5 2.0 26 26-53 14-41 (64)
115 2kat_A Uncharacterized protein 30.0 1.2E+02 0.0043 21.9 6.3 43 317-367 29-71 (115)
116 1wff_A Riken cDNA 2810002D23 p 29.8 26 0.0009 26.0 2.0 26 26-53 24-52 (85)
117 1hz4_A MALT regulatory protein 29.5 1.3E+02 0.0045 27.1 7.5 50 317-366 103-152 (373)
118 2jmo_A Parkin; IBR, E3 ligase, 29.4 34 0.0012 24.8 2.6 30 265-294 25-59 (80)
119 3jyw_9 60S ribosomal protein L 29.4 33 0.0011 24.6 2.5 30 265-296 26-55 (72)
120 2gw1_A Mitochondrial precursor 29.2 1.1E+02 0.0038 28.7 7.2 24 312-335 11-34 (514)
121 1hxi_A PEX5, peroxisome target 29.1 1.3E+02 0.0045 22.5 6.4 46 312-365 22-67 (121)
122 2dba_A Smooth muscle cell asso 28.6 1.8E+02 0.006 21.6 7.1 46 314-367 72-117 (148)
123 3sz7_A HSC70 cochaperone (SGT) 28.3 1.3E+02 0.0046 23.4 6.6 17 319-335 91-107 (164)
124 3ga8_A HTH-type transcriptiona 28.1 47 0.0016 23.8 3.2 31 284-314 35-66 (78)
125 3na7_A HP0958; flagellar bioge 28.0 22 0.00075 32.0 1.7 25 27-51 198-234 (256)
126 2c2l_A CHIP, carboxy terminus 27.9 94 0.0032 27.4 6.0 39 320-366 51-89 (281)
127 3gyz_A Chaperone protein IPGC; 27.6 1.3E+02 0.0044 24.0 6.3 48 310-365 39-86 (151)
128 2qfc_A PLCR protein; TPR, HTH, 27.5 1.2E+02 0.0042 26.5 6.8 54 313-368 202-255 (293)
129 3iz5_m 60S ribosomal protein L 27.4 49 0.0017 24.9 3.2 30 265-296 36-65 (92)
130 3ro2_A PINS homolog, G-protein 27.3 1.7E+02 0.0057 25.1 7.6 54 309-367 7-61 (338)
131 2yuu_A NPKC-delta, protein kin 27.0 23 0.00079 25.9 1.4 48 9-58 10-62 (83)
132 2l8e_A Polyhomeotic-like prote 26.8 35 0.0012 22.5 2.1 30 27-58 18-47 (49)
133 2kc7_A BFR218_protein; tetratr 26.4 1E+02 0.0035 21.5 5.0 44 317-365 45-90 (99)
134 3upv_A Heat shock protein STI1 26.4 1.7E+02 0.0058 21.4 6.6 50 308-365 5-54 (126)
135 2vgx_A Chaperone SYCD; alterna 26.4 1.5E+02 0.0051 23.1 6.5 23 313-335 27-49 (148)
136 3ulq_A Response regulator aspa 26.3 1.4E+02 0.0049 27.1 7.2 44 320-365 197-240 (383)
137 2row_A RHO-associated protein 26.1 59 0.002 24.0 3.4 44 13-58 21-71 (84)
138 3vtx_A MAMA; tetratricopeptide 26.0 1.4E+02 0.0046 23.7 6.3 43 317-367 117-159 (184)
139 3j21_g 50S ribosomal protein L 25.9 27 0.00093 23.3 1.4 27 262-294 11-37 (51)
140 4gco_A Protein STI-1; structur 25.5 1.6E+02 0.0053 22.2 6.3 45 315-367 55-99 (126)
141 2lni_A Stress-induced-phosphop 25.5 1.7E+02 0.0059 21.0 6.5 39 317-363 94-132 (133)
142 2yww_A Aspartate carbamoyltran 24.9 29 0.00098 28.6 1.6 33 265-297 105-145 (149)
143 1qqe_A Vesicular transport pro 24.9 1.5E+02 0.0052 26.0 6.8 47 318-366 48-94 (292)
144 3gw4_A Uncharacterized protein 24.8 2.2E+02 0.0074 22.5 7.4 50 316-367 75-125 (203)
145 3ieg_A DNAJ homolog subfamily 24.8 1.5E+02 0.0051 26.0 6.8 40 319-366 49-88 (359)
146 3u3w_A Transcriptional activat 24.6 1.7E+02 0.0057 25.6 7.1 50 318-368 166-215 (293)
147 3izc_m 60S ribosomal protein R 24.5 56 0.0019 24.6 3.0 30 265-296 36-65 (92)
148 3gw4_A Uncharacterized protein 24.5 2E+02 0.0069 22.7 7.1 49 316-366 35-83 (203)
149 1pc2_A Mitochondria fission pr 24.4 2.8E+02 0.0096 22.6 7.7 49 314-367 78-126 (152)
150 1na0_A Designed protein CTPR3; 24.3 1.9E+02 0.0064 20.3 6.4 40 319-366 55-94 (125)
151 2fnf_X Putative RAS effector N 24.2 44 0.0015 23.8 2.3 32 24-57 32-65 (72)
152 1rfh_A RAS association (ralgds 24.1 43 0.0015 22.7 2.2 34 22-57 17-52 (59)
153 1ptq_A Protein kinase C delta 23.5 39 0.0013 21.7 1.8 32 25-58 9-45 (50)
154 1wfl_A Zinc finger protein 216 22.9 41 0.0014 24.3 1.9 26 26-53 24-51 (74)
155 2xcb_A PCRH, regulatory protei 22.8 1.9E+02 0.0064 21.9 6.3 21 315-335 26-46 (142)
156 4fyy_B Aspartate carbamoyltran 22.8 46 0.0016 27.6 2.5 18 284-301 134-151 (153)
157 1kt0_A FKBP51, 51 kDa FK506-bi 22.5 2.4E+02 0.0082 26.9 8.2 62 306-367 267-335 (457)
158 2qfc_A PLCR protein; TPR, HTH, 22.4 2.1E+02 0.0072 24.9 7.3 51 314-366 162-213 (293)
159 3uq3_A Heat shock protein STI1 22.4 1.7E+02 0.0058 24.1 6.4 51 307-366 5-55 (258)
160 2kck_A TPR repeat; tetratricop 22.2 1.3E+02 0.0044 20.9 4.9 48 314-367 47-95 (112)
161 3rkv_A Putative peptidylprolyl 21.9 1.6E+02 0.0055 22.8 5.9 43 316-366 72-114 (162)
162 1l1o_C Replication protein A 7 21.5 27 0.00092 29.7 0.9 27 267-294 45-71 (181)
163 1x4w_A Hypothetical protein FL 21.5 45 0.0015 23.6 1.9 26 26-53 14-44 (67)
164 1z60_A TFIIH basal transcripti 21.4 26 0.00087 24.2 0.6 28 27-56 15-45 (59)
165 3q15_A PSP28, response regulat 21.3 2.1E+02 0.0071 26.0 7.2 45 320-367 235-279 (378)
166 4ayb_P DNA-directed RNA polyme 20.5 57 0.0019 21.3 2.0 19 29-47 5-31 (48)
167 4a1s_A PINS, partner of inscut 20.5 2.1E+02 0.0073 25.8 7.2 48 317-366 273-320 (411)
168 2ifu_A Gamma-SNAP; membrane fu 20.3 2.4E+02 0.0084 24.8 7.4 43 321-365 129-171 (307)
169 3urz_A Uncharacterized protein 20.1 1.7E+02 0.0057 24.2 5.8 41 317-365 64-104 (208)
No 1
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=100.00 E-value=2.3e-56 Score=448.75 Aligned_cols=330 Identities=24% Similarity=0.456 Sum_probs=270.0
Q ss_pred CCCCCCCEEEEeCCeeeeecCCCCCcccccccCc-CCCCCCCCCCccccCCHHHHHHhhhhhHHHHHHhhhhhhhhcccC
Q 016386 3 SFHVSGEVIISQEPYVCVPNNSSSISRCDGCFAS-SNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLSRLDKEKRKSV 81 (390)
Q Consensus 3 ~~I~~Ge~Il~e~P~~~~~~~~~~~~~C~~C~~~-~~~~~C~~C~~~~yCS~~C~~~~~~~H~~EC~~l~~l~~~~~~~~ 81 (390)
++|++||+|+.|+|+++++.......+|.+|+++ ..+.+|++|++++|||++||+++|++|+.||+.++.+.... .+
T Consensus 25 r~i~~Ge~Il~e~P~a~~~~~~~~~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~~l~~~~~~~--~p 102 (433)
T 3qww_A 25 RPFHVGDLLFSCPAYACVLTVGERGHHCECCFARKEGLSKCGRCKQAFYCDVECQKEDWPLHKLECSSMVVLGENW--NP 102 (433)
T ss_dssp SCBCTTCEEEEEECSEEEECGGGTTTBCTTTCCBCSSCEECTTTSCCEESSHHHHHHHHHHHTTTHHHHHHSSTTC--CC
T ss_pred CCCCCCCEEEecCCceEEecccccCCcCCcccccCCCCCCCCCCcceeecChhhhhhhhhHHHHHHHHHHHhCccC--CC
Confidence 6899999999999999999877889999999998 46899999999999999999999999999999998875322 24
Q ss_pred CHHHHHHHHHHHHHHhcCCCCCCCCCCCchHHHHHhhcccCCCChHHHHHHHHHHHHHHHHhCC--CCCCHHHHHHHHhH
Q 016386 82 TPSIRLMLKLYLRRKLQNDNVIPSTTTDNYSLVEALVAHMSDIDEKQLLLYAQIANLVNLILQW--PEISINEIAENFSK 159 (390)
Q Consensus 82 ~~~~~l~lR~l~~~~~~~~~~~~~~~~~~~~~v~~L~sh~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~ei~~~~~~ 159 (390)
+..+++++|+++++..+.+. ...+.+..+..|++|.+++.+++...+......+..+++. ...+.++|..++++
T Consensus 103 ~~~~rl~~Ril~~~~~~~~~----~~~~~~~~~~~L~sh~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~~~~ 178 (433)
T 3qww_A 103 SETVRLTARILAKQKIHPER----TPSEKLLAVREFESHLDKLDNEKKDLIQSDIAALHQFYSKYLEFPDHSSLVVLFAQ 178 (433)
T ss_dssp CHHHHHHHHHHHHHHHCCSC----CGGGSSCCGGGCCCCGGGCCHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhhcccc----CchhhhhhHHHHHhhhhccChHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH
Confidence 56789999999876554321 1123455678899999998876543333222233334432 24578999999999
Q ss_pred hhccccccccCCCCCCcccccccccccCCCCCCCeEEEEeCCEEEEEEccccCCCCeeeEeccCCCCCHHHHHHHHhccC
Q 016386 160 LACNAHTICNSELRPLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQY 239 (390)
Q Consensus 160 l~~Naf~i~~~~~~~~g~glyp~~S~~NHSC~PN~~~~f~~~~~~vrA~r~I~~Geei~isY~~~~~~~~~Rr~~L~~~~ 239 (390)
+.+|+|+|.+.+...+|.||||.+|+|||||+||+.+.|+|++++|+|+|||++||||||||++..+++.+||+.|+++|
T Consensus 179 ~~~N~f~i~~~~~~~~g~gl~p~~s~~NHsC~PN~~~~~~~~~~~~~a~r~I~~Geel~i~Y~~~~~~~~~R~~~L~~~~ 258 (433)
T 3qww_A 179 VNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIHPGDEVFTSYIDLLYPTEDRNDRLRDSY 258 (433)
T ss_dssp HHHHCEEEECTTCCEEEEEECTTGGGSEECSSCSEEEEEETTEEEEEESSCBCTTCEEEECCSCTTSCHHHHHHHHHHHH
T ss_pred HcCCceecccCCccceeEEecccccccCCCCCCCceEEEcCCEEEEEeccCcCCCCEEEEeecCCcCCHHHHHHHHhCcC
Confidence 99999999988877889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeCcccCCCCCCCCccchhhhhccccCCCCCcceeeeCCCCCccccCcCCCccCHHHHHHHHHHHHHHHHHHHhhhc
Q 016386 240 LFTCTCPRCIKLGQFDDIQESAILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRSKEEIKKIASEVNILSKKTLALTS 319 (390)
Q Consensus 240 ~F~C~C~rC~~~~~~~~~~~~~~l~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 319 (390)
+|+|.|.||.++ ++ |..+.++++ | +.....+++..+.......+++..+...
T Consensus 259 ~F~C~C~~C~~~-~~-----d~~~~~~~~----~------------------~~~~~~e~v~~~~~~~~~~le~~~~~~~ 310 (433)
T 3qww_A 259 FFTCECRECTTK-DK-----DKAKVEVRK----L------------------SSPPQAEAIRDMVRYARNVIEEFRRAKH 310 (433)
T ss_dssp SCCCCSHHHHHC-TT-----HHHHTCBCC----C------------------SSCCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEeECCCCCCC-Cc-----chhhhhhhh----c------------------CCCccHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999996 21 222222221 1 1112345666666666667776666556
Q ss_pred CCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 320 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 320 ~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
.|+|++|+++|++++..+..+++|+|+.++.+.+.|+.+|..+|++.
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~ 357 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWE 357 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHH
Confidence 78999999999999999999999999999999999999999999985
No 2
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=100.00 E-value=3.2e-56 Score=454.26 Aligned_cols=327 Identities=23% Similarity=0.411 Sum_probs=276.5
Q ss_pred CCCCCCCEEEEeCCeeeeecCCCCCcccccccCc-CCCCCCCCCCccccCCHHHHHHhhhhhHHHHHHhhhhhhhhcccC
Q 016386 3 SFHVSGEVIISQEPYVCVPNNSSSISRCDGCFAS-SNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLSRLDKEKRKSV 81 (390)
Q Consensus 3 ~~I~~Ge~Il~e~P~~~~~~~~~~~~~C~~C~~~-~~~~~C~~C~~~~yCS~~C~~~~~~~H~~EC~~l~~l~~~~~~~~ 81 (390)
++|++||+|+.|+|+++++.......+|.+|++. ..+.+|++|++++|||.+||+.+|++|+.||+.++.+.. .+
T Consensus 25 r~i~~Ge~Il~e~P~~~v~~~~~~~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~~~~~~~~----~p 100 (490)
T 3n71_A 25 KEFWAADVIFAERAYSAVVFDSLINFVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNECAAIKKYGK----VP 100 (490)
T ss_dssp SCBCTTCEEEEECCSEEEECGGGTTTBCTTTCCBCSCCEECTTTSCCEESSHHHHHHHHHHHHHHHHHHHHHTS----CC
T ss_pred cCCCCCCEEEecCCceEEecccccCCcCCCCCCCCCCCCCCCCCCCcCcCCHHHhhhhhhHHHHHhHHHHhcCc----CC
Confidence 6899999999999999988877789999999997 458999999999999999999999999999999988752 34
Q ss_pred CHHHHHHHHHHHHHHhcCCCCCCCCCCCchHHHHHhhcccCCCChHHHHHHHH-HHHHHHHHhCC--CCCCHHHHHHHHh
Q 016386 82 TPSIRLMLKLYLRRKLQNDNVIPSTTTDNYSLVEALVAHMSDIDEKQLLLYAQ-IANLVNLILQW--PEISINEIAENFS 158 (390)
Q Consensus 82 ~~~~~l~lR~l~~~~~~~~~~~~~~~~~~~~~v~~L~sh~~~~~~~~~~~~~~-~~~l~~~~l~~--~~~~~~ei~~~~~ 158 (390)
...+++++|+|++...+.... ....+..+..|++|.+++.+++...+.. ++.++. +++. ..++.++|..+++
T Consensus 101 ~~~~rl~lRiL~~~~~~~~~~----~~~~~~~~~~L~sh~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~ 175 (490)
T 3n71_A 101 NENIRLAARIMWRVEREGTGL----TEGCLVSVDDLQNHVEHFGEEEQKELRVDVDTFLQ-YWPPQSQQFSMQYISHIFG 175 (490)
T ss_dssp CHHHHHHHHHHHHHHHTTSSB----CTTCSSBGGGSCCCGGGCCHHHHHHHHHHHHHHHH-HSCTTSCCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhccCccC----cchhhhHHHHHHhhhhhcCchHHHHHHHHHHHHHH-HccccccCCCHHHHHHHHH
Confidence 567899999998765443221 2234667889999999998876544433 334443 4442 3678999999999
Q ss_pred HhhccccccccCC-CCCCcccccccccccCCCCCCCeEEEEeCC-------------EEEEEEccccCCCCeeeEeccCC
Q 016386 159 KLACNAHTICNSE-LRPLGTGLYPVISIINHSCLPNAVLVFEGR-------------LAVVRAVQHVPKGAEVLISYIET 224 (390)
Q Consensus 159 ~l~~Naf~i~~~~-~~~~g~glyp~~S~~NHSC~PN~~~~f~~~-------------~~~vrA~r~I~~Geei~isY~~~ 224 (390)
++.+|+|+|.+.+ ...+|.||||.+|+|||||+||+.+.|+++ .++|+|+|||++||||||||++.
T Consensus 176 ~~~~N~f~i~~~~g~~~~g~gl~p~~s~~NHSC~PN~~~~~~~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~~ 255 (490)
T 3n71_A 176 VINCNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDF 255 (490)
T ss_dssp HHHTTEEEEECTTSCSEEEEEECTTGGGCEECSSCSEEEEEECCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSCS
T ss_pred HHhccCcccccCCCCccceEEEchhhhhcccCCCCCeeEEecCCccccccccccccceEEEEECCCCCCCCEEEEeecCC
Confidence 9999999998766 457899999999999999999999999987 89999999999999999999999
Q ss_pred CCCHHHHHHHHhccCCeEeeCcccCCCCCCCCccchhhhhccccCCCCCcceeeeCCCCCccccCcCCCccCHHHHHHHH
Q 016386 225 AGSTMTRQKALKEQYLFTCTCPRCIKLGQFDDIQESAILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRSKEEIKKIA 304 (390)
Q Consensus 225 ~~~~~~Rr~~L~~~~~F~C~C~rC~~~~~~~~~~~~~~l~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~~~~v~~~~ 304 (390)
.+++.+||+.|+++|+|+|.|.+|.++ + .++.++ ++++ +...+.+.+..++
T Consensus 256 ~~~~~~R~~~L~~~~~F~C~C~~C~~~-~----~~~~~~-~~~~-----------------------~~~~s~e~v~~~l 306 (490)
T 3n71_A 256 LHLSEERRRQLKKQYYFDCSCEHCQKG-L----KDDLFL-AAKE-----------------------DPKPSQEVVKEMI 306 (490)
T ss_dssp CSCHHHHHHHHHHHHSSCCCCHHHHHT-T----THHHHT-CBCS-----------------------SSCCCHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCeEeeCCCCCCC-C----cccchh-hccc-----------------------CCCCCHHHHHHHH
Confidence 999999999999999999999999995 2 223333 2211 1133567888888
Q ss_pred HHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhc
Q 016386 305 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
+.++.+++++..+..+|++++|+.+|++++..+..+++|+|+.++.+.+.|+.+|..+|++..
T Consensus 307 ~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~e 369 (490)
T 3n71_A 307 QFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEE 369 (490)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHH
Confidence 899999999999999999999999999999999999999999999999999999999999853
No 3
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=100.00 E-value=1.5e-54 Score=435.77 Aligned_cols=318 Identities=26% Similarity=0.491 Sum_probs=259.2
Q ss_pred CCCCCCCEEEEeCCeeeeecCCCCCcccccccCc-CCCCCCCCCCccccCCHHHHHHhhhhhHHHHHHhhhhhhhhcccC
Q 016386 3 SFHVSGEVIISQEPYVCVPNNSSSISRCDGCFAS-SNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLSRLDKEKRKSV 81 (390)
Q Consensus 3 ~~I~~Ge~Il~e~P~~~~~~~~~~~~~C~~C~~~-~~~~~C~~C~~~~yCS~~C~~~~~~~H~~EC~~l~~l~~~~~~~~ 81 (390)
++|++||+|+.|.|+++++.......+|.+|+++ ..+.+|++|++++|||++||+++|++|+.||+.++.+.+. .+
T Consensus 23 r~i~~Ge~Il~e~P~~~~~~~~~~~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~~~~~~~~~---~~ 99 (429)
T 3qwp_A 23 TPLRPGELLFRSDPLAYTVCKGSRGVVCDRCLLGKEKLMRCSQCRVAKYCSAKCQKKAWPDHKRECKCLKSCKPR---YP 99 (429)
T ss_dssp SCBCTTCEEEEECCSEEEECGGGBTTBCTTTCCBCSSCEECTTTSCCEESSHHHHHHTHHHHHHHHHHHHHTTTC---CC
T ss_pred CCCCCCCEEEecCCceeeeccccCCCcCcCCCCcCCCCCcCCCCCCcccCChhhhhhhhhhhHHhhhhHHhcCcc---CC
Confidence 6899999999999999999887789999999997 4689999999999999999999999999999999887532 24
Q ss_pred CHHHHHHHHHHHHHHhcCCCCCCCCCCCchHHHHHhhcccCCCChHHHHHHHHHHHHHHHHhCCC------CCCHHHHHH
Q 016386 82 TPSIRLMLKLYLRRKLQNDNVIPSTTTDNYSLVEALVAHMSDIDEKQLLLYAQIANLVNLILQWP------EISINEIAE 155 (390)
Q Consensus 82 ~~~~~l~lR~l~~~~~~~~~~~~~~~~~~~~~v~~L~sh~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~ei~~ 155 (390)
...+++++|++++..... + ...+.|..+..|++|.+++++++...+..+...+..++... ..+.+++++
T Consensus 100 ~~~~rl~~rill~~~~~~----~-~~~~~~~~~~~L~sh~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 174 (429)
T 3qwp_A 100 PDSVRLLGRVVFKLMDGA----P-SESEKLYSFYDLESNINKLTEDRKEGLRQLVMTFQHFMREEIQDASQLPPAFDLFE 174 (429)
T ss_dssp CHHHHHHHHHHHHHHHSC----C-CGGGSSSCGGGCCCCGGGCCHHHHHHHHHHHHHHHHHTTTTCCSGGGSCTTCCHHH
T ss_pred ChHHHHHHHHHHHHhcCC----C-CchhhhhhHHHHhhChhhcChhHHHHHHHHHHHHHHHHhhhcCccccCCCHHHHHH
Confidence 466889999988754311 1 12234557889999999988776555555554455555432 123457899
Q ss_pred HHhHhhccccccccCCCCCCcccccccccccCCCCCCCeEEEEeCCEEEEEEccccCCCCeeeEeccCCCCCHHHHHHHH
Q 016386 156 NFSKLACNAHTICNSELRPLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKAL 235 (390)
Q Consensus 156 ~~~~l~~Naf~i~~~~~~~~g~glyp~~S~~NHSC~PN~~~~f~~~~~~vrA~r~I~~Geei~isY~~~~~~~~~Rr~~L 235 (390)
+++++.+|+|+|.+.+...+|.||||.+|+|||||.||+.+.|+|++++|+|+|||++||||||||++..+++.+||+.|
T Consensus 175 ~~~~~~~N~f~i~~~~~~~~g~~l~~~~s~~NHsC~PN~~~~~~~~~~~~~a~r~I~~GeEl~isY~~~~~~~~~R~~~L 254 (429)
T 3qwp_A 175 AFAKVICNSFTICNAEMQEVGVGLYPSISLLNHSCDPNCSIVFNGPHLLLRAVRDIEVGEELTICYLDMLMTSEERRKQL 254 (429)
T ss_dssp HHHHHHHHCEEEECTTSCEEEEEECTTGGGCEECSSCSEEEEEETTEEEEEECSCBCTTCEEEECCSCSSCCHHHHHHHH
T ss_pred HHHHHHhcCccccccccccceEEEchhhHhhCcCCCCCeEEEEeCCEEEEEEeeeECCCCEEEEEecCCCCCHHHHHHHH
Confidence 99999999999998877788999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCeEeeCcccCCCCCCCCccchhhhhccccCCCCCcceeeeCCCCCccccCcCCCccCHHHHHHHHHHHHHHHHHHH
Q 016386 236 KEQYLFTCTCPRCIKLGQFDDIQESAILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRSKEEIKKIASEVNILSKKTL 315 (390)
Q Consensus 236 ~~~~~F~C~C~rC~~~~~~~~~~~~~~l~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~~~~v~~~~~~~~~~~~~~~ 315 (390)
+++|+|+|.|.+|.++ + ..+.++++ . ...|. .+++.++...
T Consensus 255 ~~~~~F~C~C~~C~~~-~----~~~~~~~~---------------~-~~~~~------------------~~~~ll~~ie 295 (429)
T 3qwp_A 255 RDQYCFECDCFRCQTQ-D----KDADMLTG---------------D-EQVWK------------------EVQESLKKIE 295 (429)
T ss_dssp HHHHCCCCCSHHHHHT-T----THHHHTCS---------------C-HHHHH------------------HHHHHHHHHH
T ss_pred hccCCeEeeCCCCCCC-c----cccccccc---------------c-hhhhH------------------HHHHHHHHHH
Confidence 9999999999999995 1 12222110 0 01121 1223334444
Q ss_pred hhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhc
Q 016386 316 ALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 316 ~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
++..+|++++|++++++++..+..+++|+|+.++.+.+.|+.+|..+|+|..
T Consensus 296 ~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~e 347 (429)
T 3qwp_A 296 ELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEE 347 (429)
T ss_dssp HHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHH
Confidence 4556789999999999999999999999999999999999999999999853
No 4
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.55 E-value=1.5e-15 Score=139.75 Aligned_cols=80 Identities=29% Similarity=0.408 Sum_probs=66.5
Q ss_pred hccccccccCCCCCCccccccc-ccccCCCCCCCeEEEEe-CCEEEEEEccccCCCCeeeEeccCCCCCHHHHHHHHhcc
Q 016386 161 ACNAHTICNSELRPLGTGLYPV-ISIINHSCLPNAVLVFE-GRLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQ 238 (390)
Q Consensus 161 ~~Naf~i~~~~~~~~g~glyp~-~S~~NHSC~PN~~~~f~-~~~~~vrA~r~I~~Geei~isY~~~~~~~~~Rr~~L~~~ 238 (390)
..|.|.+..+. +....++|+. ++++||||.||+.+.+. +.++.|+|+|||++|||||++|++.+++ .
T Consensus 155 ~~n~f~i~~~~-~~~~~~l~~~~ar~iNHSC~PN~~~~~~~~~~i~v~A~rdI~~GEElt~~Y~~~~~~----------~ 223 (247)
T 3rq4_A 155 GENDFSIMYST-RKRSAQLWLGPAAFINHDCKPNCKFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFG----------E 223 (247)
T ss_dssp TTSCTTEEEET-TTTEEEEEESGGGGCEECSSCSEEEEEETTTEEEEEESSCBCTTCBCEECCCTTSSS----------G
T ss_pred cCCcEEEEecC-CcccceeecchhhhcCCCCCCCEEEEEeCCCEEEEEECCcCCCCCEEEEecCchhcC----------C
Confidence 36777775432 2456789987 88999999999977755 6789999999999999999999999775 4
Q ss_pred CCeEeeCcccCCC
Q 016386 239 YLFTCTCPRCIKL 251 (390)
Q Consensus 239 ~~F~C~C~rC~~~ 251 (390)
+.|.|.|.+|.++
T Consensus 224 ~~f~C~C~~C~~~ 236 (247)
T 3rq4_A 224 KNEHCECHTCERK 236 (247)
T ss_dssp GGTTCCCHHHHHH
T ss_pred CCCEEECCCCCCC
Confidence 7899999999885
No 5
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=99.45 E-value=2.3e-14 Score=133.30 Aligned_cols=81 Identities=26% Similarity=0.397 Sum_probs=62.5
Q ss_pred hhccccccccCCCCCCccccc-ccccccCCCCCCCeEEEEeCC-EEEEEEccccCCCCeeeEeccCCCCCHHHHHHHHhc
Q 016386 160 LACNAHTICNSELRPLGTGLY-PVISIINHSCLPNAVLVFEGR-LAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKE 237 (390)
Q Consensus 160 l~~Naf~i~~~~~~~~g~gly-p~~S~~NHSC~PN~~~~f~~~-~~~vrA~r~I~~Geei~isY~~~~~~~~~Rr~~L~~ 237 (390)
...|.|.+........ .+++ ..++++||||.||+.+.++|. .+.++|+|||++|||||++|++..++
T Consensus 183 ~~~~dF~i~~s~~~~~-a~~~g~~arfiNHSC~PN~~~~~~~~~~i~i~A~RdI~~GEELt~~Y~~~~~~---------- 251 (273)
T 3s8p_A 183 HGENDFSVMYSTRKNC-AQLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDIEPGEEISCYYGDGFFG---------- 251 (273)
T ss_dssp TTTSCTTEEEETTTTE-EEEEESGGGGCEECSSCSEEEEEEETTEEEEEESSCBCTTCBCEECCCTTTTS----------
T ss_pred hcccccceeccccccc-cceecchHHhhCCCCCCCeEEEEcCCCEEEEEECceeCCCCEEEEecCchhcC----------
Confidence 3456676653322222 2344 446899999999999988876 89999999999999999999998765
Q ss_pred cCCeEeeCcccCCC
Q 016386 238 QYLFTCTCPRCIKL 251 (390)
Q Consensus 238 ~~~F~C~C~rC~~~ 251 (390)
.+.|.|.|.+|.-.
T Consensus 252 ~~~f~C~C~~c~cr 265 (273)
T 3s8p_A 252 ENNEFCECYTCERR 265 (273)
T ss_dssp GGGTTCCCHHHHHH
T ss_pred CCCeEEECCCCcCC
Confidence 36899999999763
No 6
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.28 E-value=8.3e-13 Score=108.72 Aligned_cols=54 Identities=22% Similarity=0.220 Sum_probs=48.4
Q ss_pred CcccccccccccCCCCCCCeEEEEeC--CEEEEEEccccCCCCeeeEeccCCCCCH
Q 016386 175 LGTGLYPVISIINHSCLPNAVLVFEG--RLAVVRAVQHVPKGAEVLISYIETAGST 228 (390)
Q Consensus 175 ~g~glyp~~S~~NHSC~PN~~~~f~~--~~~~vrA~r~I~~Geei~isY~~~~~~~ 228 (390)
.+..+++.++++||||.||+...++. ..+.++|+|||++|||||++|++..++.
T Consensus 57 d~~~~~~~~~~~NHsc~pN~~~~~~~~~~~~~~~A~rdI~~GeElt~~Y~~~~~~~ 112 (119)
T 1n3j_A 57 MSAMALGFGAIFNHSKDPNARHELTAGLKRMRIFTIKPIAIGEEITISYGDDYWLS 112 (119)
T ss_dssp EEEEESSSHHHHHSCSSCCCEEEECSSSSCEEEEECSCBCSSEEECCCCCCCCCCC
T ss_pred ccccccCceeeeccCCCCCeeEEEECCCeEEEEEEccccCCCCEEEEecCchhhcC
Confidence 36778899999999999999998874 4799999999999999999999988765
No 7
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens}
Probab=99.26 E-value=9e-13 Score=96.19 Aligned_cols=59 Identities=32% Similarity=0.619 Sum_probs=40.4
Q ss_pred CCCCCCCEEEEeCCeeeeecCCCCCcccccccCcCCCCCCCCCCccccCCHHHHHHhhhhhHHHHHHhh
Q 016386 3 SFHVSGEVIISQEPYVCVPNNSSSISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLS 71 (390)
Q Consensus 3 ~~I~~Ge~Il~e~P~~~~~~~~~~~~~C~~C~~~~~~~~C~~C~~~~yCS~~C~~~~~~~H~~EC~~l~ 71 (390)
++|++||+||.+.| ....|..|++. .+.+|++|+.++|||.+||..+|..|+.||..+.
T Consensus 2 ~~~~~G~~il~~~~---------~~~~C~~C~~~-~~~~Cs~C~~~~YCs~~CQ~~~W~~Hk~~C~~~~ 60 (64)
T 2odd_A 2 NLYFQGENLYFQGD---------SSESCWNCGRK-ASETCSGCNTARYCGSFCQHKDWEKHHHICGQTL 60 (64)
T ss_dssp -------------C---------CSSSCTTTSSC-CCEEETTTSCCEESSHHHHHHHHHHHTTTTTSSC
T ss_pred CcCCCCCEEeeCCC---------CCCcCccccCC-CcccCCCCCChhhCCHHHHHHHHHHHhHHHhccc
Confidence 58999999999999 24789999984 6789999999999999999999999999998543
No 8
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=99.13 E-value=3.8e-11 Score=106.75 Aligned_cols=59 Identities=27% Similarity=0.551 Sum_probs=43.0
Q ss_pred cccccCCCCCCCeEEEE---eC-CEEEEEEccccCCCCeeeEeccCCCCCHHHHHHHHhccCCeEeeCc--ccC
Q 016386 182 VISIINHSCLPNAVLVF---EG-RLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTCP--RCI 249 (390)
Q Consensus 182 ~~S~~NHSC~PN~~~~f---~~-~~~~vrA~r~I~~Geei~isY~~~~~~~~~Rr~~L~~~~~F~C~C~--rC~ 249 (390)
.++++||||.||+...+ +| ..+.++|+|||++|||||++|.+..+.. .+.|.|.|. .|.
T Consensus 124 ~arfiNHSC~PN~~~~~~~~~g~~~i~i~A~rdI~~GEELt~dY~~~~~~~---------~~~~~C~Cgs~~Cr 188 (192)
T 2w5y_A 124 AARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIEDA---------SNKLPCNCGAKKCR 188 (192)
T ss_dssp GGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCEEEECCCC----------------CCBCCCCCTTCC
T ss_pred hhHhhccCCCCCEEEEEEEECCcEEEEEEECcccCCCCEEEEEcCCchhcC---------CCCceeECCCCCCc
Confidence 46789999999998643 33 2688999999999999999999876542 367999983 454
No 9
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=99.00 E-value=1.5e-10 Score=100.69 Aligned_cols=54 Identities=22% Similarity=0.233 Sum_probs=44.2
Q ss_pred ccccCCCCCCCeEEE--EeCC--EEEEEEccccCCCCeeeEeccCCCCCHHHHHHHHh
Q 016386 183 ISIINHSCLPNAVLV--FEGR--LAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALK 236 (390)
Q Consensus 183 ~S~~NHSC~PN~~~~--f~~~--~~~vrA~r~I~~Geei~isY~~~~~~~~~Rr~~L~ 236 (390)
+.++||||.||+... +.++ .+.++|+|||++|||||++|.+.......|+..|+
T Consensus 108 aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~L~ 165 (166)
T 3f9x_A 108 GRLINHSKCGNCQTKLHDIDGVPHLILIASRDIAAGEELLFDYGDRSKASIEAHPWLK 165 (166)
T ss_dssp GGGCEECTTCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCCCCCHHHHHHCGGGG
T ss_pred hheeecCCCCCeeEEEEEECCeeEEEEEECCcCCCCCEEEEEcCCChhhHhhhCchhc
Confidence 568899999997654 4444 58899999999999999999998877777766665
No 10
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=98.95 E-value=4.2e-10 Score=102.51 Aligned_cols=55 Identities=25% Similarity=0.376 Sum_probs=42.8
Q ss_pred ccccCCCCCCCeEEEE--eCC--EEEEEEccccCCCCeeeEeccCCCCCHHHHHHHHhccCCeEeeCc
Q 016386 183 ISIINHSCLPNAVLVF--EGR--LAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTCP 246 (390)
Q Consensus 183 ~S~~NHSC~PN~~~~f--~~~--~~~vrA~r~I~~Geei~isY~~~~~~~~~Rr~~L~~~~~F~C~C~ 246 (390)
+.++||||.||+.... .++ ++.++|+|||++|||||++|.+..+.. ...|.|.|-
T Consensus 147 aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~---------~~~~~C~CG 205 (222)
T 3ope_A 147 ARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNV---------EKQQLCKCG 205 (222)
T ss_dssp GGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECTTSSBCCC---------SCCCBCCCC
T ss_pred ceeeccCCCCCeEeEEEEECCeEEEEEEECCccCCCCEEEEECCCcccCC---------cCCCEeeCC
Confidence 4578999999997654 333 688999999999999999999876542 235777664
No 11
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=98.93 E-value=5e-10 Score=102.67 Aligned_cols=54 Identities=20% Similarity=0.312 Sum_probs=42.6
Q ss_pred ccccCCCCCCCeEEEE--eC--CEEEEEEccccCCCCeeeEeccCCCCCHHHHHHHHhccCCeEeeCc
Q 016386 183 ISIINHSCLPNAVLVF--EG--RLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTCP 246 (390)
Q Consensus 183 ~S~~NHSC~PN~~~~f--~~--~~~~vrA~r~I~~Geei~isY~~~~~~~~~Rr~~L~~~~~F~C~C~ 246 (390)
+.++||||.||+.... .+ .++.++|+|||++|||||++|....++ ...|.|.|.
T Consensus 166 aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~----------~~~~~C~CG 223 (232)
T 3ooi_A 166 ARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLG----------NGKTVCKCG 223 (232)
T ss_dssp GGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTCSTT----------CTTCBCCCC
T ss_pred cccccccCCCCeEEEEEEECCceEEEEEECCccCCCCEEEEECCCCcCC----------CCCcEeECC
Confidence 5688999999987643 33 368899999999999999999876543 345888774
No 12
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=98.83 E-value=2.1e-09 Score=100.91 Aligned_cols=54 Identities=24% Similarity=0.321 Sum_probs=41.0
Q ss_pred ccccCCCCCCCeEE--EEeCC--EEEEEEccccCCCCeeeEeccCCCCCHHHHHHHHhccCCeEeeCc
Q 016386 183 ISIINHSCLPNAVL--VFEGR--LAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTCP 246 (390)
Q Consensus 183 ~S~~NHSC~PN~~~--~f~~~--~~~vrA~r~I~~Geei~isY~~~~~~~~~Rr~~L~~~~~F~C~C~ 246 (390)
+.++||||.||+.. .+.++ ++.++|+|||++|||||++|....++ ...|.|.|-
T Consensus 191 aRFiNHSC~PN~~~~~~~v~g~~ri~~fA~RdI~~GEELT~dY~~~~~~----------~~~~~C~CG 248 (278)
T 3h6l_A 191 SRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFDYQFQRYG----------KEAQKCFCG 248 (278)
T ss_dssp GGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTTEEC----------SSCEECCCC
T ss_pred hhhcccCCCCCceeEEEEeCCceEEEEEECCccCCCCEEEEecCCCcCC----------CCCcEeECC
Confidence 55789999999754 33444 58899999999999999999875432 245777663
No 13
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=98.81 E-value=2.5e-09 Score=108.61 Aligned_cols=93 Identities=15% Similarity=0.119 Sum_probs=75.4
Q ss_pred CCCHHHHHHHHhHhhccccccccCCCCCCcccccccccccCCCCCCCeE-EEEeCCEEEEEEccccCCCCeeeEeccCCC
Q 016386 147 EISINEIAENFSKLACNAHTICNSELRPLGTGLYPVISIINHSCLPNAV-LVFEGRLAVVRAVQHVPKGAEVLISYIETA 225 (390)
Q Consensus 147 ~~~~~ei~~~~~~l~~Naf~i~~~~~~~~g~glyp~~S~~NHSC~PN~~-~~f~~~~~~vrA~r~I~~Geei~isY~~~~ 225 (390)
.++.+.+...++.+.+++|.+...+....+.+|+|.+.|+||||.||.+ +.++++.+.++|.++|++||||+|||++.
T Consensus 237 ~~t~e~f~wA~~~v~SRa~~~~~~~g~~~~~~LvP~~Dm~NH~~~~~~~~~~~~~~~~~~~a~~~i~~Geei~isYG~~- 315 (497)
T 3smt_A 237 SFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVALQDFRAGEQIYIFYGTR- 315 (497)
T ss_dssp CCCHHHHHHHHHHHHHHCEEEECTTSSSEEEEECTTGGGCEECSCSEEEEEETTTTEEEEEESSCBCTTCEEEECCCSC-
T ss_pred ccCHHHHHHhhheEecccccccCcccccccceeechHHhhcCCCcccceeeeccCCeEEEEeCCccCCCCEEEEeCCCC-
Confidence 4678888888999999999886654444567999999999999999654 44456789999999999999999999985
Q ss_pred CCHHHHHHHHhccCCeEeeC
Q 016386 226 GSTMTRQKALKEQYLFTCTC 245 (390)
Q Consensus 226 ~~~~~Rr~~L~~~~~F~C~C 245 (390)
+ ...|...|||.+.-
T Consensus 316 -~----n~~Ll~~YGFv~~~ 330 (497)
T 3smt_A 316 -S----NAEFVIHSGFFFDN 330 (497)
T ss_dssp -C----HHHHHHHHSCCCTT
T ss_pred -C----hHHHHHHCCCCCCC
Confidence 2 24566699998643
No 14
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=98.78 E-value=3.2e-09 Score=101.07 Aligned_cols=63 Identities=27% Similarity=0.502 Sum_probs=35.0
Q ss_pred ccccCCCCCCCeEEEE-eC-------CEEEEEEccccCCCCeeeEeccCCCCCHHH-HHHHHhccCCeEeeC
Q 016386 183 ISIINHSCLPNAVLVF-EG-------RLAVVRAVQHVPKGAEVLISYIETAGSTMT-RQKALKEQYLFTCTC 245 (390)
Q Consensus 183 ~S~~NHSC~PN~~~~f-~~-------~~~~vrA~r~I~~Geei~isY~~~~~~~~~-Rr~~L~~~~~F~C~C 245 (390)
+.++||||+||+.+.. .+ .++.++|+|+|++|||||++|.+..+.... +....+....|.|.|
T Consensus 221 arfiNHSC~PN~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~dY~~~~~~~~~~~~~~~k~~~~~~C~C 292 (302)
T 1ml9_A 221 TRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDAHDPSKISEMTKCLC 292 (302)
T ss_dssp GGGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC-----------------------
T ss_pred HHhcccCCCCCeeEEEEEeccCCCCceEEEEEECCCcCCCCEEEEEECCCccccccccccccccCCCcEeeC
Confidence 5689999999997643 22 268999999999999999999987654321 111122234577777
No 15
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=98.77 E-value=6.5e-09 Score=104.39 Aligned_cols=92 Identities=22% Similarity=0.222 Sum_probs=73.2
Q ss_pred CCCHHHHHHHHhHhhccccccccCC----CCCCcccccccccccCCCCCCCeEEEEeCCEEEEEEccccCCCCeeeEecc
Q 016386 147 EISINEIAENFSKLACNAHTICNSE----LRPLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHVPKGAEVLISYI 222 (390)
Q Consensus 147 ~~~~~ei~~~~~~l~~Naf~i~~~~----~~~~g~glyp~~S~~NHSC~PN~~~~f~~~~~~vrA~r~I~~Geei~isY~ 222 (390)
.++.+......+.+.+-+|.+...+ ....+.+|.|.+.++||||.||+.+.|+++.+.++|.++|++||||+|||+
T Consensus 183 ~~t~e~f~wA~~~v~SRsf~~~~~~~~~~~~~~~~~LvP~~D~~NH~~~~~~~~~~~~~~~~~~a~~~i~~Geei~~~YG 262 (449)
T 3qxy_A 183 VRSLELYHQLVALVMAYSFQEPLEEEEDEKEPNSPVMVPAADILNHLANHNANLEYSANCLRMVATQPIPKGHEIFNTYG 262 (449)
T ss_dssp GCCHHHHHHHHHHHHHHCBCCCCC-----CCCCCCBBCTTGGGCEECSSCSEEEEECSSEEEEEESSCBCTTCEEEECCS
T ss_pred cCcHHHHHHHHHHHHHHhcccccCcccccccCCceeEeecHHHhcCCCCCCeEEEEeCCeEEEEECCCcCCCchhhccCC
Confidence 3566677777777777777654221 124678999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHhccCCeEee
Q 016386 223 ETAGSTMTRQKALKEQYLFTCT 244 (390)
Q Consensus 223 ~~~~~~~~Rr~~L~~~~~F~C~ 244 (390)
+. + ...|...|||...
T Consensus 263 ~~--~----n~~ll~~YGF~~~ 278 (449)
T 3qxy_A 263 QM--A----NWQLIHMYGFVEP 278 (449)
T ss_dssp SC--C----HHHHHHHHSCCCC
T ss_pred CC--C----HHHHHHhCCCCCC
Confidence 83 2 3556669999863
No 16
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=98.77 E-value=1.3e-09 Score=102.91 Aligned_cols=55 Identities=29% Similarity=0.476 Sum_probs=41.7
Q ss_pred ccccCCCCCCCeEEE--EeC------CEEEEEEccccCCCCeeeEeccCCCCCHHHHHHHHhccCCeEeeC
Q 016386 183 ISIINHSCLPNAVLV--FEG------RLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTC 245 (390)
Q Consensus 183 ~S~~NHSC~PN~~~~--f~~------~~~~vrA~r~I~~Geei~isY~~~~~~~~~Rr~~L~~~~~F~C~C 245 (390)
+.++||||.||+... +.. .++.++|+|||++|||||++|.+.++.. ....|.|.|
T Consensus 217 aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dYg~~~~~~--------~~~~~~C~C 279 (287)
T 3hna_A 217 SRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDI--------KGKLFSCRC 279 (287)
T ss_dssp GGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECCCHHHHHH--------HTTTCCCCC
T ss_pred hheeeecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEEeCCCccccc--------CCCcCEeeC
Confidence 447799999999753 321 2799999999999999999998643322 134788888
No 17
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=98.76 E-value=1.9e-09 Score=100.34 Aligned_cols=45 Identities=22% Similarity=0.349 Sum_probs=37.0
Q ss_pred ccccCCCCCCCeEEEE--e---CCEEEEEEccccCCCCeeeEeccCCCCC
Q 016386 183 ISIINHSCLPNAVLVF--E---GRLAVVRAVQHVPKGAEVLISYIETAGS 227 (390)
Q Consensus 183 ~S~~NHSC~PN~~~~f--~---~~~~~vrA~r~I~~Geei~isY~~~~~~ 227 (390)
+.++||||.||+...+ + +..+.++|+|||++|||||++|.....+
T Consensus 187 aRfiNHSC~PN~~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dYg~~~~~ 236 (261)
T 2f69_A 187 GHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHSP 236 (261)
T ss_dssp GGGCEECSSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEECCCCCSCC
T ss_pred eeeEeeCCCCCeEEEEEEcCCCCcEEEEEECcccCCCCEEEEEcCCcccc
Confidence 5688999999998765 2 2234899999999999999999876553
No 18
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=98.68 E-value=1.2e-08 Score=96.85 Aligned_cols=45 Identities=22% Similarity=0.338 Sum_probs=37.2
Q ss_pred cccccCCCCCCCeEEE--EeC------CEEEEEEccccCCCCeeeEeccCCCC
Q 016386 182 VISIINHSCLPNAVLV--FEG------RLAVVRAVQHVPKGAEVLISYIETAG 226 (390)
Q Consensus 182 ~~S~~NHSC~PN~~~~--f~~------~~~~vrA~r~I~~Geei~isY~~~~~ 226 (390)
.+.++||||+||+... +.+ ..+.++|+|||++|||||++|.+..+
T Consensus 213 ~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~ 265 (299)
T 1mvh_A 213 VSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKD 265 (299)
T ss_dssp GGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSS
T ss_pred hhheEeecCCCCeEEEEEEeecCCCCceEEEEEEccCcCCCCEEEEEcCCccc
Confidence 3568999999999753 322 37899999999999999999988765
No 19
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=98.66 E-value=1.6e-08 Score=95.99 Aligned_cols=44 Identities=25% Similarity=0.422 Sum_probs=36.5
Q ss_pred cccccCCCCCCCeEEE--EeC------CEEEEEEccccCCCCeeeEeccCCC
Q 016386 182 VISIINHSCLPNAVLV--FEG------RLAVVRAVQHVPKGAEVLISYIETA 225 (390)
Q Consensus 182 ~~S~~NHSC~PN~~~~--f~~------~~~~vrA~r~I~~Geei~isY~~~~ 225 (390)
.+.++||||+||+... +.+ ..+.++|+|||++|||||++|.+..
T Consensus 215 ~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GEELt~dY~~~~ 266 (300)
T 2r3a_A 215 VSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMKG 266 (300)
T ss_dssp GGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTCEEEECGGGSS
T ss_pred hHHheecCCCCCEEEEEEEeccCCCCceEEEEEEccCCCCCCEEEEECCCCc
Confidence 4678999999999764 221 3789999999999999999998763
No 20
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=98.63 E-value=2.3e-08 Score=94.44 Aligned_cols=46 Identities=20% Similarity=0.301 Sum_probs=38.3
Q ss_pred cccccCCCCCCCeEEEE---eC--CEEEEEEccccCCCCeeeEeccCCCCC
Q 016386 182 VISIINHSCLPNAVLVF---EG--RLAVVRAVQHVPKGAEVLISYIETAGS 227 (390)
Q Consensus 182 ~~S~~NHSC~PN~~~~f---~~--~~~~vrA~r~I~~Geei~isY~~~~~~ 227 (390)
.+.++||||.||+.+.. ++ .++.++|+|||++|||||++|.+.++.
T Consensus 205 ~arfiNHSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~ 255 (290)
T 3bo5_A 205 IGRFLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYLN 255 (290)
T ss_dssp GGGGCEECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTSCTTC
T ss_pred chheeeecCCCCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCCcccc
Confidence 35689999999998643 43 479999999999999999999987654
No 21
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=98.63 E-value=1.5e-08 Score=96.09 Aligned_cols=43 Identities=21% Similarity=0.239 Sum_probs=35.3
Q ss_pred ccccCCCCCCCeEEEE-eC---CE-EEEEEccccCCCCeeeEeccCCC
Q 016386 183 ISIINHSCLPNAVLVF-EG---RL-AVVRAVQHVPKGAEVLISYIETA 225 (390)
Q Consensus 183 ~S~~NHSC~PN~~~~f-~~---~~-~~vrA~r~I~~Geei~isY~~~~ 225 (390)
+.++||||+||+...+ .. .. +.++|+|||++|||||++|....
T Consensus 241 ar~iNHsc~pN~~~~~~~~~~~~~~~~~~a~r~I~~geElt~~Yg~~~ 288 (293)
T 1h3i_A 241 GHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDH 288 (293)
T ss_dssp GGGSEEESSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEEEEETTB
T ss_pred eeeeccCCCCCeEEEEEEcCCCCcEEEEEECCccCCCCEEEEecCCCC
Confidence 5588999999998876 22 23 58999999999999999997653
No 22
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=98.56 E-value=1.8e-08 Score=72.18 Aligned_cols=45 Identities=38% Similarity=0.761 Sum_probs=40.1
Q ss_pred CCcccccccCcCCCCCCCCCCccccCCHHHHHHhhhhhHHHHHHhh
Q 016386 26 SISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLS 71 (390)
Q Consensus 26 ~~~~C~~C~~~~~~~~C~~C~~~~yCS~~C~~~~~~~H~~EC~~l~ 71 (390)
....|..|.+. .+.+|++|+.++|||.+||..+|..|+.||..+.
T Consensus 14 ~~~~C~~C~~~-~~~~Cs~C~~v~YCs~~CQ~~~W~~Hk~~C~~~~ 58 (60)
T 2dj8_A 14 SSESCWNCGRK-ASETCSGCNTARYCGSFCQHKDWEKHHHICSGPS 58 (60)
T ss_dssp CSCCCSSSCSC-CCEECTTTSCCEESSHHHHHHTHHHHTTTSCCSS
T ss_pred CCcccccCCCC-CcccCCCCCCEeeeCHHHHHHHHHHHHHHHHhcc
Confidence 46789999984 6789999999999999999999999999997653
No 23
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=98.55 E-value=5.9e-08 Score=82.57 Aligned_cols=45 Identities=18% Similarity=0.313 Sum_probs=40.1
Q ss_pred ccccCCCCCC---CeEEEEeCCEEEEEEccccCCCCeeeEeccCCCCC
Q 016386 183 ISIINHSCLP---NAVLVFEGRLAVVRAVQHVPKGAEVLISYIETAGS 227 (390)
Q Consensus 183 ~S~~NHSC~P---N~~~~f~~~~~~vrA~r~I~~Geei~isY~~~~~~ 227 (390)
+.++||||.| |+...-.++++.++|+|||++||||++.|.+...+
T Consensus 100 ~RfINhSc~p~eqNl~~~~~~~~I~~~A~RdI~~GEEL~~dY~~~~~~ 147 (149)
T 2qpw_A 100 LRYVNWACSGEEQNLFPLEINRAIYYKTLKPIAPGEELLVWYNGEDNP 147 (149)
T ss_dssp GGGCEECBTTBTCCEEEEEETTEEEEEESSCBCTTCBCEECCCCCCCC
T ss_pred eeeeeccCChhhcCEEEEEECCEEEEEEccCCCCCCEEEEccCCccCC
Confidence 5689999999 99887678899999999999999999999887654
No 24
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=98.55 E-value=2.5e-08 Score=69.26 Aligned_cols=44 Identities=32% Similarity=0.794 Sum_probs=36.6
Q ss_pred CCCCcccccccCcCCCCCCCCCCccccCCHHHHHHhhhhhHHHHH
Q 016386 24 SSSISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQ 68 (390)
Q Consensus 24 ~~~~~~C~~C~~~~~~~~C~~C~~~~yCS~~C~~~~~~~H~~EC~ 68 (390)
......|..|.+. .+.+|++|+.+.|||.+||..+|..|+.||.
T Consensus 6 ~~~~~~C~~C~~~-~~~~C~~C~~~~YCs~~CQ~~~W~~Hk~~C~ 49 (52)
T 2jw6_A 6 ERKEQSCVNCGRE-AMSECTGCHKVNYCSTFCQRKDWKDHQHICG 49 (52)
T ss_dssp -----CCSSSSSS-CSEECTTTCSSEESSHHHHHHHTTTGGGTTT
T ss_pred cccCCcCCCCCCC-CcCcCCCCCCEeecCHHHHHHHHHHHCHHHc
Confidence 3456789999985 6889999999999999999999999999996
No 25
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=98.39 E-value=7.4e-08 Score=68.91 Aligned_cols=53 Identities=36% Similarity=0.737 Sum_probs=39.8
Q ss_pred CeeeeecCCCCCcccccccCcCCCCCCCCCCccccCCHHHHHHhhhhhHHHHHHh
Q 016386 16 PYVCVPNNSSSISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVL 70 (390)
Q Consensus 16 P~~~~~~~~~~~~~C~~C~~~~~~~~C~~C~~~~yCS~~C~~~~~~~H~~EC~~l 70 (390)
|-.+.+.. .....|..|.+. .+.+|++|+.+.|||.+||..+|..|+.||..+
T Consensus 3 ~~~~~~~~-~~~~~C~~C~~~-~~~~Cs~C~~v~YCs~~CQ~~dW~~Hk~~C~~~ 55 (60)
T 2od1_A 3 PNSGSPNS-DSSESCWNCGRK-ASETCSGCNTARYCGSFCQHKDWEKHHHICGQT 55 (60)
T ss_dssp ---------CCSSCCTTTSSC-CCEECTTTSCCEESSHHHHHHHHHHHTTTSSCS
T ss_pred CcccCcCC-CCCCccccCCCc-ccccCCCCCCeeecCHHHHHHHHHHHhHHHccc
Confidence 33444432 346789999984 678999999999999999999999999999754
No 26
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A
Probab=98.34 E-value=1.8e-07 Score=68.90 Aligned_cols=45 Identities=38% Similarity=0.890 Sum_probs=40.3
Q ss_pred CcccccccCcCCCCCCCCCCccccCCHHHHHHhhhhhHHHHHHhhh
Q 016386 27 ISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLSR 72 (390)
Q Consensus 27 ~~~C~~C~~~~~~~~C~~C~~~~yCS~~C~~~~~~~H~~EC~~l~~ 72 (390)
...|..|.+. .+.+|++|+.+.|||.+||..+|..|+.+|..+..
T Consensus 15 ~~~C~~C~~~-~~~~Cs~Ck~v~YCs~eCQ~~~W~~HK~~C~~~~~ 59 (70)
T 2d8q_A 15 RPRCAYCSAE-ASKRCSRCQNEWYCCRECQVKHWEKHGKTCVLAAQ 59 (70)
T ss_dssp CCBCSSSCCB-CCCBCTTTSCCBCSCHHHHHHTHHHHHHHCCCCCC
T ss_pred CCcCCCCCCc-ccccCCCCCCEeeCCHHHhHHHHHHHHHHHHHHHH
Confidence 5789999985 67899999999999999999999999999986653
No 27
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=98.30 E-value=7.4e-07 Score=89.15 Aligned_cols=89 Identities=20% Similarity=0.235 Sum_probs=67.0
Q ss_pred CCCHHHHHHHHhHhhccccccccCCCCCCcccccccccccCCCCCCCe---EEEEe--------CCEEEEEEccccCCCC
Q 016386 147 EISINEIAENFSKLACNAHTICNSELRPLGTGLYPVISIINHSCLPNA---VLVFE--------GRLAVVRAVQHVPKGA 215 (390)
Q Consensus 147 ~~~~~ei~~~~~~l~~Naf~i~~~~~~~~g~glyp~~S~~NHSC~PN~---~~~f~--------~~~~~vrA~r~I~~Ge 215 (390)
.++.+.+.-.++.+.+.+|.+.. ..+.+|.|.+-|+|||+.||+ .+.++ ++.++++|.++|++||
T Consensus 158 ~~t~~~f~wA~~~v~SRaf~~~~----~~~~~LvP~~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Ge 233 (440)
T 2h21_A 158 PVTLDDFFWAFGILRSRAFSRLR----NENLVVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGE 233 (440)
T ss_dssp CCCHHHHHHHHHHHHHHCBCCC-------CCBCCSSTTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTS
T ss_pred CCCHHHHHHHHHHhcccceeccC----CCceEEeechHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCC
Confidence 35778888888888888886532 236799999999999999974 33333 2469999999999999
Q ss_pred eeeEeccCCCCCHHHHHHHHhccCCeEee
Q 016386 216 EVLISYIETAGSTMTRQKALKEQYLFTCT 244 (390)
Q Consensus 216 ei~isY~~~~~~~~~Rr~~L~~~~~F~C~ 244 (390)
||+|||++.. + ...|...|||...
T Consensus 234 ei~~sYG~~~-~----N~~LL~~YGFv~~ 257 (440)
T 2h21_A 234 QVYIQYDLNK-S----NAELALDYGFIEP 257 (440)
T ss_dssp BCEECSCTTC-C----HHHHHHHSSCCCS
T ss_pred EEEEeCCCCC-C----HHHHHHhCCCCcC
Confidence 9999999863 2 2445558999754
No 28
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=97.59 E-value=5.8e-05 Score=64.13 Aligned_cols=45 Identities=16% Similarity=0.135 Sum_probs=38.0
Q ss_pred cccccCCCCCC---CeEEEEeCCEEEEEEccccCCCCeeeEeccCCCC
Q 016386 182 VISIINHSCLP---NAVLVFEGRLAVVRAVQHVPKGAEVLISYIETAG 226 (390)
Q Consensus 182 ~~S~~NHSC~P---N~~~~f~~~~~~vrA~r~I~~Geei~isY~~~~~ 226 (390)
.+.++||+|.+ |+...-.++++.++|+|+|++||||++-|.+.++
T Consensus 97 WmR~Vn~A~~~~eqNl~a~q~~~~I~~~a~rdI~pGeELlv~Yg~~y~ 144 (151)
T 3db5_A 97 WMMFVRKARNREEQNLVAYPHDGKIFFCTSQDIPPENELLFYYSRDYA 144 (151)
T ss_dssp GGGGCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEECC---
T ss_pred ceeEEEecCCcccCceEEEEECCEEEEEEccccCCCCEEEEecCHHHH
Confidence 45789999965 9988778899999999999999999999998753
No 29
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=97.42 E-value=0.00013 Score=63.00 Aligned_cols=43 Identities=21% Similarity=0.298 Sum_probs=37.4
Q ss_pred ccccCCCCC---CCeEEEEeCCEEEEEEccccCCCCeeeEeccCCC
Q 016386 183 ISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEVLISYIETA 225 (390)
Q Consensus 183 ~S~~NHSC~---PN~~~~f~~~~~~vrA~r~I~~Geei~isY~~~~ 225 (390)
+.++||+|. +|+...-.++.+.++|+|+|++||||++-|.+.+
T Consensus 102 mR~Vn~A~~~~eqNl~a~q~~~~I~~~a~RdI~pGeELlvwYg~~y 147 (170)
T 3ep0_A 102 MTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNSH 147 (170)
T ss_dssp GGGCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEECC--
T ss_pred eeeEEecCCcccCCeeeEEECCEEEEEECcCcCCCCEEEEeeCHHH
Confidence 467899997 8988877889999999999999999999998864
No 30
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=97.12 E-value=0.00036 Score=61.63 Aligned_cols=42 Identities=17% Similarity=0.271 Sum_probs=37.7
Q ss_pred ccccCCCCC---CCeEEEEeCCEEEEEEccccCCCCeeeEeccCC
Q 016386 183 ISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEVLISYIET 224 (390)
Q Consensus 183 ~S~~NHSC~---PN~~~~f~~~~~~vrA~r~I~~Geei~isY~~~ 224 (390)
+.++||+|. +|+...-.++.+.++|+|+|++||||++-|.+.
T Consensus 132 mRfVn~A~~~~eqNl~a~q~~~~I~y~a~RdI~pGeELlvwYg~~ 176 (196)
T 3dal_A 132 MRYVNPAHSPREQNLAACQNGMNIYFYTIKPIPANQELLVWYCRD 176 (196)
T ss_dssp GGGCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEECHH
T ss_pred EEeEEecCCcccCCcEEEEECCEEEEEECcccCCCCEEEEecCHH
Confidence 568999997 798887788999999999999999999999864
No 31
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=96.80 E-value=0.00088 Score=56.79 Aligned_cols=43 Identities=14% Similarity=0.139 Sum_probs=38.5
Q ss_pred cccccCCCCC---CCeEEEEeCCEEEEEEccccCCCCeeeEeccCC
Q 016386 182 VISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEVLISYIET 224 (390)
Q Consensus 182 ~~S~~NHSC~---PN~~~~f~~~~~~vrA~r~I~~Geei~isY~~~ 224 (390)
-+.++||+|. +|+...-.++.+.++|+|+|++||||++-|.+.
T Consensus 96 Wmr~vn~a~~~~eqNl~a~q~~~~I~~~~~r~I~pGeELlv~Y~~~ 141 (152)
T 3ihx_A 96 WMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYAAS 141 (152)
T ss_dssp GGGGCCBCCSTTTCCEEEEECSSSEEEEESSCBCTTCBCCEEECHH
T ss_pred ceeeeeccCCccCCCcEEEEeCCeEEEEEeeecCCCCEEEEechHH
Confidence 3578999998 799888888899999999999999999999865
No 32
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=96.47 E-value=0.0021 Score=58.06 Aligned_cols=44 Identities=16% Similarity=0.095 Sum_probs=38.8
Q ss_pred cccccCCCCC---CCeEEEEeCCEEEEEEccccCCCCeeeEeccCCC
Q 016386 182 VISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEVLISYIETA 225 (390)
Q Consensus 182 ~~S~~NHSC~---PN~~~~f~~~~~~vrA~r~I~~Geei~isY~~~~ 225 (390)
-+.++||+|. +|+...-.++.+.++|+|+|++||||++-|.+.+
T Consensus 140 WmRfVn~Ar~~~EqNL~A~q~~~~Iyy~a~RdI~pGeELlVwYg~~Y 186 (237)
T 3ray_A 140 WMRYVVISREEREQNLLAFQHSERIYFRACRDIRPGEWLRVWYSEDY 186 (237)
T ss_dssp GGGGCEECCCTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEECHHH
T ss_pred ceeEEEcCCCcccccceeEEeCCEEEEEEccccCCCCEEEEeeCHHH
Confidence 3578999996 6988888889999999999999999999998764
No 33
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.00 E-value=0.034 Score=38.42 Aligned_cols=37 Identities=30% Similarity=0.733 Sum_probs=29.8
Q ss_pred CcccccccCcCCCCCCCCCCccccCCHHHHHHhhhhhHHHHHH
Q 016386 27 ISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQV 69 (390)
Q Consensus 27 ~~~C~~C~~~~~~~~C~~C~~~~yCS~~C~~~~~~~H~~EC~~ 69 (390)
...|..|.. ...+.|++|.. .|||-+|.+ .|+.+|.-
T Consensus 12 ~~~C~vC~~-~~kY~CPrC~~-~yCSl~C~k----~Hk~~C~~ 48 (56)
T 2yqq_A 12 TVVCVICLE-KPKYRCPACRV-PYCSVVCFR----KHKEQCNP 48 (56)
T ss_dssp CCCCTTTCS-CCSEECTTTCC-EESSHHHHH----HHHHHCCC
T ss_pred CCccCcCcC-CCeeeCCCCCC-CeeCHHHHH----HHHhhCcC
Confidence 457999998 77889999997 699999975 47766643
No 34
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=93.29 E-value=0.028 Score=39.18 Aligned_cols=36 Identities=28% Similarity=0.696 Sum_probs=28.9
Q ss_pred CcccccccC---cCCCCCCCCCCccccCCHHHHHHhhhhhHHHHH
Q 016386 27 ISRCDGCFA---SSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQ 68 (390)
Q Consensus 27 ~~~C~~C~~---~~~~~~C~~C~~~~yCS~~C~~~~~~~H~~EC~ 68 (390)
...|..|.. ......|+.|+. .|||-.|.+ .|+ ||.
T Consensus 11 ~~~C~vC~~~~~~~akY~CPrC~~-rYCSl~C~k----~Hk-~Cs 49 (59)
T 1x4s_A 11 AGPCGFCPAGEVQPARYTCPRCNA-PYCSLRCYR----THG-TCA 49 (59)
T ss_dssp CEEECSSCTTCCEEECEECTTTCC-EESSHHHHH----HHC-CGG
T ss_pred CCcCcCCCCCcCCCccccCcCCCC-CccChHHHH----HHh-HhC
Confidence 468999986 345789999997 599999987 477 775
No 35
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=91.76 E-value=0.32 Score=48.01 Aligned_cols=53 Identities=19% Similarity=0.090 Sum_probs=48.1
Q ss_pred hhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhccc
Q 016386 317 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCLGC 369 (390)
Q Consensus 317 ~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~~~ 369 (390)
....|++++|+.++++++..+..++.|+|+.++.+...|+.+|...|.+..+-
T Consensus 350 y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~ 402 (433)
T 3qww_A 350 CLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGE 402 (433)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHH
Confidence 33578999999999999999999999999999999999999999999886543
No 36
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=91.07 E-value=0.35 Score=47.66 Aligned_cols=51 Identities=10% Similarity=-0.090 Sum_probs=47.1
Q ss_pred cCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhccc
Q 016386 319 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCLGC 369 (390)
Q Consensus 319 ~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~~~ 369 (390)
..|++++|+.++++++..+..++.|+|+.++.+...|+.+|...|.+..+-
T Consensus 341 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~ 391 (429)
T 3qwp_A 341 NLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAM 391 (429)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred hhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHH
Confidence 468999999999999999999999999999999999999999999886543
No 37
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=91.02 E-value=0.4 Score=48.08 Aligned_cols=52 Identities=15% Similarity=0.045 Sum_probs=47.7
Q ss_pred hcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhccc
Q 016386 318 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCLGC 369 (390)
Q Consensus 318 ~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~~~ 369 (390)
...|++++|+.++++++..+..++.|+|+.++.+...|+.+|...|.+..+-
T Consensus 362 ~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~ 413 (490)
T 3n71_A 362 SYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGH 413 (490)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 3578999999999999999999999999999999999999999999986543
No 38
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=72.41 E-value=2.2 Score=28.24 Aligned_cols=30 Identities=27% Similarity=0.647 Sum_probs=22.9
Q ss_pred ccccCCCCCcc-eeeeCCCCCccccCcCCCccC
Q 016386 265 GYRCKDDGCSG-FLLRDSDDKGFTCQQCGLVRS 296 (390)
Q Consensus 265 ~~~C~~~~C~g-~~~~~~~~~~~~C~~C~~~~~ 296 (390)
.+.|| .|++ .+..+.....+.|..||..+.
T Consensus 5 ~~~CP--~C~~~~l~~d~~~gelvC~~CG~v~~ 35 (50)
T 1pft_A 5 QKVCP--ACESAELIYDPERGEIVCAKCGYVIE 35 (50)
T ss_dssp CCSCT--TTSCCCEEEETTTTEEEESSSCCBCC
T ss_pred cEeCc--CCCCcceEEcCCCCeEECcccCCccc
Confidence 35797 7877 666666667799999998765
No 39
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=72.06 E-value=9.2 Score=28.85 Aligned_cols=45 Identities=11% Similarity=-0.084 Sum_probs=31.1
Q ss_pred cCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhcc
Q 016386 319 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCLG 368 (390)
Q Consensus 319 ~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~~ 368 (390)
..|++++|+..++.++. .+|.+.....+...++.+|..+|....+
T Consensus 51 ~~~~~~~A~~~~~~~~~-----~~p~~~~~~~~~~~la~~~~~~g~~~~A 95 (129)
T 2xev_A 51 ATRNFQLAEAQFRDLVS-----RYPTHDKAAGGLLKLGLSQYGEGKNTEA 95 (129)
T ss_dssp HTTCHHHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHHTTCHHHH
T ss_pred HhccHHHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHHcCCHHHH
Confidence 45677777777776654 3477766677777788888877776544
No 40
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=71.48 E-value=1.7 Score=31.09 Aligned_cols=30 Identities=20% Similarity=0.465 Sum_probs=17.2
Q ss_pred cccccccCcCCCCCCCCCCccccCCHHHHHHh
Q 016386 28 SRCDGCFASSNLKKCSACQVVWYCGSNCQKLD 59 (390)
Q Consensus 28 ~~C~~C~~~~~~~~C~~C~~~~yCS~~C~~~~ 59 (390)
..|-.|.++..-.. .=.+..|||+.|+..|
T Consensus 10 ~~CP~Cgkp~~W~~--~~~~rPFCSeRCr~iD 39 (68)
T 1lv3_A 10 VNCPTCGKTVVWGE--ISPFRPFCSKRCQLID 39 (68)
T ss_dssp EECTTTCCEEECSS--SSSCCSSSSHHHHHHH
T ss_pred CcCCCCCCcccccc--cCCCCcccCHHHHhhh
Confidence 45667766621000 0023479999999865
No 41
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=71.24 E-value=2 Score=29.69 Aligned_cols=36 Identities=25% Similarity=0.512 Sum_probs=25.9
Q ss_pred chhhhhccccCCCCCcc-eeeeCCCCCccccCcCCCccC
Q 016386 259 ESAILEGYRCKDDGCSG-FLLRDSDDKGFTCQQCGLVRS 296 (390)
Q Consensus 259 ~~~~l~~~~C~~~~C~g-~~~~~~~~~~~~C~~C~~~~~ 296 (390)
.+.++..++|| .|++ .+..+.....+.|..||..+.
T Consensus 5 ~~~ll~~~~Cp--~C~~~~lv~D~~~ge~vC~~CGlVl~ 41 (58)
T 1dl6_A 5 RLDALPRVTCP--NHPDAILVEDYRAGDMICPECGLVVG 41 (58)
T ss_dssp SCCCCSCCSBT--TBSSSCCEECSSSCCEECTTTCCEEC
T ss_pred hhhccccccCc--CCCCCceeEeCCCCeEEeCCCCCEEe
Confidence 34566677897 7865 455555667899999998764
No 42
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=67.39 E-value=16 Score=31.28 Aligned_cols=54 Identities=19% Similarity=0.207 Sum_probs=45.8
Q ss_pred HHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhc
Q 016386 314 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 314 ~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
+.-....|++++|++.++.++........+.++....+...|+.+|..+|.+..
T Consensus 134 a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 187 (283)
T 3edt_B 134 ALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQD 187 (283)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHH
Confidence 333456789999999999999888888888888999999999999999998743
No 43
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=66.70 E-value=20 Score=27.69 Aligned_cols=46 Identities=11% Similarity=0.077 Sum_probs=33.5
Q ss_pred HHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 313 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 313 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
.+......|++++|++.|++++.. +|.+. .+...++.+|..+|.+.
T Consensus 14 lG~~~~~~~~~~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~~~~~~ 59 (127)
T 4gcn_A 14 LGNAAYKQKDFEKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFEEKKFA 59 (127)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHHhhhHH
Confidence 344455688999999999988764 56654 45667888888888774
No 44
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=66.54 E-value=1.5 Score=32.79 Aligned_cols=30 Identities=13% Similarity=0.342 Sum_probs=22.6
Q ss_pred ccccCCCCCcceeeeCCCCCccccCcCCCccC
Q 016386 265 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 296 (390)
Q Consensus 265 ~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~ 296 (390)
.+.|| .|++..........|+|..|+..+.
T Consensus 27 ~y~Cp--~CG~~~v~r~atGiW~C~~Cg~~~a 56 (83)
T 1vq8_Z 27 DHACP--NCGEDRVDRQGTGIWQCSYCDYKFT 56 (83)
T ss_dssp CEECS--SSCCEEEEEEETTEEEETTTCCEEE
T ss_pred cCcCC--CCCCcceeccCCCeEECCCCCCEec
Confidence 56896 7877665555567899999998753
No 45
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=65.74 E-value=17 Score=28.08 Aligned_cols=46 Identities=11% Similarity=-0.005 Sum_probs=24.8
Q ss_pred HHHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcch
Q 016386 312 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSIL 365 (390)
Q Consensus 312 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~ 365 (390)
+++......|++++|++.|+++++. .|.+. .+...++.+|..+|.+
T Consensus 18 ~~G~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~~~~~ 63 (126)
T 4gco_A 18 NKGNEYFKKGDYPTAMRHYNEAVKR-----DPENA---ILYSNRAACLTKLMEF 63 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHhhccH
Confidence 3444455566666666666665543 24432 3444555566665555
No 46
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=65.67 E-value=13 Score=29.72 Aligned_cols=63 Identities=16% Similarity=0.136 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhccc---CCC-------chhHHHHHHHHHHHHHHhcchhc
Q 016386 305 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLY---HPF-------SVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~l---hp~-------~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
..+..+.+.+......|++++|+..|..++....... .|. ++....+...++.+|..+|.+..
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~ 81 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHE 81 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH
Confidence 3455566677777788999999999999887643321 232 34556778888999999888743
No 47
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=65.45 E-value=12 Score=32.61 Aligned_cols=53 Identities=9% Similarity=0.117 Sum_probs=38.7
Q ss_pred HHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 309 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 309 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
.++..+......|++++|+..|+.++. .+|.+.....+...++.+|..+|++.
T Consensus 17 ~~~~~a~~~~~~g~~~~A~~~~~~~l~-----~~p~~~~~~~a~~~lg~~~~~~~~~~ 69 (261)
T 3qky_A 17 EAFERAMEFYNQGKYDRAIEYFKAVFT-----YGRTHEWAADAQFYLARAYYQNKEYL 69 (261)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHGG-----GCSCSTTHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHH-----hCCCCcchHHHHHHHHHHHHHhCcHH
Confidence 445556666677888888888877755 35777777778888888888887764
No 48
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=64.60 E-value=18 Score=27.07 Aligned_cols=35 Identities=20% Similarity=0.134 Sum_probs=18.6
Q ss_pred cCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHH
Q 016386 319 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKG 358 (390)
Q Consensus 319 ~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~ 358 (390)
..|++++|++.++.++.. +|.+.....++..|..+
T Consensus 88 ~~g~~~~A~~~~~~~~~~-----~p~~~~~~~a~~~l~~l 122 (129)
T 2xev_A 88 GEGKNTEAQQTLQQVATQ-----YPGSDAARVAQERLQSI 122 (129)
T ss_dssp HTTCHHHHHHHHHHHHHH-----STTSHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHH-----CCCChHHHHHHHHHHHH
Confidence 345666666666555442 35555555555554443
No 49
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=64.30 E-value=20 Score=27.01 Aligned_cols=38 Identities=8% Similarity=-0.018 Sum_probs=16.9
Q ss_pred CCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcch
Q 016386 320 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSIL 365 (390)
Q Consensus 320 ~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~ 365 (390)
.+++++|+..++.++.. .|.+ ..+...++.+|..+|..
T Consensus 51 ~~~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~~~~ 88 (126)
T 3upv_A 51 LMSFPEAIADCNKAIEK-----DPNF---VRAYIRKATAQIAVKEY 88 (126)
T ss_dssp TTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCH
T ss_pred hcCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHHhCH
Confidence 34455555555444432 2332 23344445555555544
No 50
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=63.53 E-value=17 Score=31.16 Aligned_cols=52 Identities=12% Similarity=0.045 Sum_probs=44.9
Q ss_pred hhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhc
Q 016386 316 ALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 316 ~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
-....|++++|++.++.++........+.++....+...++.+|..+|.+..
T Consensus 94 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 145 (283)
T 3edt_B 94 LYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEE 145 (283)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHH
Confidence 3446789999999999999888888888889999999999999999998743
No 51
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.42 E-value=19 Score=27.55 Aligned_cols=46 Identities=9% Similarity=0.056 Sum_probs=23.4
Q ss_pred HhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcch
Q 016386 315 LALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSIL 365 (390)
Q Consensus 315 ~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~ 365 (390)
......+++++|++.|+.++. ..|.+.....+...++.+|..+|.+
T Consensus 36 ~~~~~~~~~~~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~~~~~ 81 (148)
T 2dba_A 36 NELFKCGDYGGALAAYTQALG-----LDATPQDQAVLHRNRAACHLKLEDY 81 (148)
T ss_dssp HHHHTTTCHHHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHhCCHHHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHHHccH
Confidence 333445566666666655543 2344444445555555555555554
No 52
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=62.97 E-value=14 Score=31.62 Aligned_cols=41 Identities=5% Similarity=-0.134 Sum_probs=26.4
Q ss_pred hcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhc
Q 016386 318 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSS 363 (390)
Q Consensus 318 ~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~ 363 (390)
...|++++|++.|+.+++ .+|.+.....+...+..+|..+|
T Consensus 52 ~~~~~~~~A~~~~~~~l~-----~~P~~~~~~~a~~~~g~~~~~~~ 92 (225)
T 2yhc_A 52 YKNADLPLAQAAIDRFIR-----LNPTHPNIDYVMYMRGLTNMALD 92 (225)
T ss_dssp HHTTCHHHHHHHHHHHHH-----HCTTCTTHHHHHHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHHH-----HCcCCCcHHHHHHHHHHHHHhhh
Confidence 345667777777766654 34666666666666777776655
No 53
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=62.89 E-value=23 Score=25.53 Aligned_cols=42 Identities=5% Similarity=-0.074 Sum_probs=22.1
Q ss_pred cCCCHHHHHHHHHHHHHhhhcccCCCc---hhHHHHHHHHHHHHHHhcch
Q 016386 319 SCGNHQEVVSTYKMIEKLQKKLYHPFS---VNLMQTREKLIKGYIHSSIL 365 (390)
Q Consensus 319 ~~~~~~~a~~~~~~~~~~~~~~lhp~~---~~~~~~~~~l~~~y~~~~~~ 365 (390)
..|++++|++.++.++.. .|.+ .....+...+..+|..+|..
T Consensus 50 ~~g~~~~A~~~~~~al~~-----~p~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (111)
T 2l6j_A 50 KLGEYTQAIQMCQQGLRY-----TSTAEHVAIRSKLQYRLELAQGAVGSV 94 (111)
T ss_dssp HTTCHHHHHHHHHHHHTS-----CSSTTSHHHHHHHHHHHHHHHHHHHCC
T ss_pred HhcCHHHHHHHHHHHHHh-----CCCccHHHHHHHHHHHHHHHHHHHHhH
Confidence 445666666666555432 3333 23455566666666666543
No 54
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=58.15 E-value=29 Score=25.44 Aligned_cols=37 Identities=8% Similarity=0.147 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhc
Q 016386 303 IASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKK 339 (390)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 339 (390)
+++.+-+++.+|......|++++|+.+|...+.....
T Consensus 7 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 43 (83)
T 2v6y_A 7 LEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQ 43 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 4456667778888888899999999999987766544
No 55
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=57.75 E-value=31 Score=30.05 Aligned_cols=55 Identities=18% Similarity=0.227 Sum_probs=45.5
Q ss_pred HHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhcc
Q 016386 314 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCLG 368 (390)
Q Consensus 314 ~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~~ 368 (390)
+.-....+++++|++.++.++........+.+.....+...++.+|..+|....+
T Consensus 160 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 214 (311)
T 3nf1_A 160 ALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQA 214 (311)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHH
Confidence 3334467899999999999988877777788888899999999999999987543
No 56
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=57.28 E-value=39 Score=26.60 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhccc
Q 016386 304 ASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLY 341 (390)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~l 341 (390)
++.+..++.+|......+++++|+.+|...+..+..++
T Consensus 15 l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~al 52 (117)
T 2cpt_A 15 LQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVV 52 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 34455566677777778899999999998877665543
No 57
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=54.34 E-value=35 Score=24.83 Aligned_cols=46 Identities=15% Similarity=0.010 Sum_probs=30.4
Q ss_pred HHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhc
Q 016386 314 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 314 ~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
+.-....|++++|+..++.++... |.+.. +...|+.+|..+|.+..
T Consensus 14 g~~~~~~g~~~~A~~~~~~al~~~-----p~~~~---a~~~lg~~~~~~g~~~~ 59 (100)
T 3ma5_A 14 AQEHLKHDNASRALALFEELVETD-----PDYVG---TYYHLGKLYERLDRTDD 59 (100)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHS-----TTCTH---HHHHHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhC-----CCcHH---HHHHHHHHHHHcCCHHH
Confidence 333445678888888888877643 54433 56667778887777643
No 58
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=53.85 E-value=32 Score=29.91 Aligned_cols=54 Identities=13% Similarity=-0.052 Sum_probs=43.5
Q ss_pred HHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhc
Q 016386 314 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 314 ~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
+......|++++|+..++.++........+.+.....+...++.+|..+|.+..
T Consensus 34 ~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 87 (311)
T 3nf1_A 34 VIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKD 87 (311)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHH
Confidence 344456789999999999998887766666778888899999999999888743
No 59
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=53.35 E-value=23 Score=26.05 Aligned_cols=37 Identities=14% Similarity=0.233 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhc
Q 016386 303 IASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKK 339 (390)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 339 (390)
+++.+-+++.+|......|++++|+.+|...+.....
T Consensus 15 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 51 (83)
T 2w2u_A 15 LEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQ 51 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 4566667788888888899999999999987665443
No 60
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=51.58 E-value=39 Score=26.79 Aligned_cols=39 Identities=10% Similarity=0.147 Sum_probs=18.9
Q ss_pred cCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcch
Q 016386 319 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSIL 365 (390)
Q Consensus 319 ~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~ 365 (390)
..+++++|+..++.++.. .|.+ ..+...++.+|..+|..
T Consensus 57 ~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~ 95 (164)
T 3sz7_A 57 ASGQHEKAAEDAELATVV-----DPKY---SKAWSRLGLARFDMADY 95 (164)
T ss_dssp HTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCH
T ss_pred HccCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHccCH
Confidence 344555555555554432 2333 23444555555555554
No 61
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=50.16 E-value=49 Score=24.55 Aligned_cols=45 Identities=9% Similarity=-0.085 Sum_probs=32.7
Q ss_pred HHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 314 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 314 ~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
+.-....|++++|+..+++++.. +|.+ ..+...++.+|..+|...
T Consensus 34 g~~~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~~g~~~ 78 (117)
T 3k9i_A 34 GSTFRTLGEYRKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYNLGRYE 78 (117)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHHcCCHH
Confidence 33445678999999999888764 4666 456677888888888764
No 62
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=50.12 E-value=59 Score=26.64 Aligned_cols=61 Identities=8% Similarity=-0.083 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCch----------hHHHHHHHHHHHHHHhcchhc
Q 016386 305 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSV----------NLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~----------~~~~~~~~l~~~y~~~~~~~~ 367 (390)
..+......+......+++++|++.|+.++..... +|... ....+...++.+|..+|.+..
T Consensus 36 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~--~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~ 106 (198)
T 2fbn_A 36 QSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH--TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPK 106 (198)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT--CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc--ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 34455566666677789999999999998765432 12111 123677788888888887743
No 63
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=50.11 E-value=28 Score=24.73 Aligned_cols=16 Identities=6% Similarity=0.177 Sum_probs=7.7
Q ss_pred CCCHHHHHHHHHHHHH
Q 016386 320 CGNHQEVVSTYKMIEK 335 (390)
Q Consensus 320 ~~~~~~a~~~~~~~~~ 335 (390)
.+++++|++.++.++.
T Consensus 13 ~~~~~~A~~~~~~al~ 28 (99)
T 2kc7_A 13 QGDIENALQALEEFLQ 28 (99)
T ss_dssp HTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH
Confidence 3455555555544443
No 64
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=49.75 E-value=41 Score=23.99 Aligned_cols=40 Identities=10% Similarity=-0.089 Sum_probs=21.0
Q ss_pred cCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 319 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 319 ~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
..+++++|+..++.++.. .|.+ ..+...++.+|..+|...
T Consensus 50 ~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~ 89 (118)
T 1elw_A 50 KKGDYQKAYEDGCKTVDL-----KPDW---GKGYSRKAAALEFLNRFE 89 (118)
T ss_dssp HHTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHH
T ss_pred hhccHHHHHHHHHHHHHh-----Cccc---HHHHHHHHHHHHHHhhHH
Confidence 345666666666555443 2333 234455666666666553
No 65
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=48.79 E-value=39 Score=28.64 Aligned_cols=53 Identities=11% Similarity=0.020 Sum_probs=42.4
Q ss_pred HHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhccccc
Q 016386 314 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCLGCSI 371 (390)
Q Consensus 314 ~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~~~~~ 371 (390)
+.-....|++.+|+..|+.+++. .|.+.....+...++.+|..+|+...+-..
T Consensus 154 a~~~~~~~~~~~A~~~~~~~l~~-----~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~ 206 (225)
T 2yhc_A 154 AEYYTERGAWVAVVNRVEGMLRD-----YPDTQATRDALPLMENAYRQMQMNAQAEKV 206 (225)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHH-----STTSHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHHHHHH-----CcCCCccHHHHHHHHHHHHHcCCcHHHHHH
Confidence 33445678999999999988774 488888889999999999999998655433
No 66
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=48.57 E-value=43 Score=26.97 Aligned_cols=14 Identities=0% Similarity=-0.353 Sum_probs=6.7
Q ss_pred HHHHHHHHHHhcch
Q 016386 352 REKLIKGYIHSSIL 365 (390)
Q Consensus 352 ~~~l~~~y~~~~~~ 365 (390)
...+..+|..+|..
T Consensus 107 ~~~lg~~~~~lg~~ 120 (151)
T 3gyz_A 107 VFHTGQCQLRLKAP 120 (151)
T ss_dssp HHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHcCCH
Confidence 34445555555544
No 67
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=48.46 E-value=10 Score=27.03 Aligned_cols=34 Identities=24% Similarity=0.417 Sum_probs=26.1
Q ss_pred hhhhccccCCCCCcceeeeCCCCCccccCcCCCccC
Q 016386 261 AILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 296 (390)
Q Consensus 261 ~~l~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~ 296 (390)
.+++-+.|| .|+|.+..........|..||....
T Consensus 4 ~LLeiL~CP--~ck~~L~~~~~~~~LiC~~cg~~YP 37 (69)
T 2pk7_A 4 KLLDILACP--ICKGPLKLSADKTELISKGAGLAYP 37 (69)
T ss_dssp CGGGTCCCT--TTCCCCEECTTSSEEEETTTTEEEE
T ss_pred HHHhheeCC--CCCCcCeEeCCCCEEEcCCCCcEec
Confidence 356778997 7999887666666778999998654
No 68
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=48.25 E-value=5.8 Score=27.45 Aligned_cols=31 Identities=19% Similarity=0.298 Sum_probs=21.9
Q ss_pred ccccCCCCCcceeeeC----CCCCccccCcCCCcc
Q 016386 265 GYRCKDDGCSGFLLRD----SDDKGFTCQQCGLVR 295 (390)
Q Consensus 265 ~~~C~~~~C~g~~~~~----~~~~~~~C~~C~~~~ 295 (390)
-++|..+.|.+++-|- .....|+|.-|+..-
T Consensus 9 pvRC~r~~CraylNP~~~~~~~~~~W~C~~C~~~N 43 (59)
T 2yrc_A 9 PVLCSRTTCRAVLNPLCQVDYRAKLWACNFCYQRN 43 (59)
T ss_dssp CCBCSCTTTCCBCCTTSEEEGGGTEEECSSSCCEE
T ss_pred CcccCCCCCCeEECCceEEECCCCEEEcccCCCcC
Confidence 4689754598887542 335689999999763
No 69
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=47.82 E-value=72 Score=23.18 Aligned_cols=35 Identities=14% Similarity=0.060 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhc
Q 016386 305 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKK 339 (390)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 339 (390)
+.+..++.+|......|++++|+.+|...+.....
T Consensus 11 ~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~ 45 (85)
T 2v6x_A 11 TKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLML 45 (85)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 44555667777777889999999999987766544
No 70
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=46.63 E-value=28 Score=28.07 Aligned_cols=43 Identities=26% Similarity=0.295 Sum_probs=32.5
Q ss_pred hhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhc
Q 016386 317 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 317 ~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
....|++++|++.|+++++. +|++. .+...++.+|..+|.+..
T Consensus 15 ~~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~~~~~~~ 57 (184)
T 3vtx_A 15 KRTKGDFDGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMDIGLPND 57 (184)
T ss_dssp HHHHTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCHHH
T ss_pred HHHcCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHCCCHHH
Confidence 34568999999999988764 56664 466778888888887743
No 71
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=46.52 E-value=75 Score=23.70 Aligned_cols=37 Identities=11% Similarity=0.147 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcc
Q 016386 304 ASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKL 340 (390)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 340 (390)
++.+-.++.+|......+++++|+.+|...+......
T Consensus 12 l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~a 48 (93)
T 1wfd_A 12 STAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQV 48 (93)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 3455566777777788899999999999877665443
No 72
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=44.50 E-value=74 Score=26.71 Aligned_cols=64 Identities=17% Similarity=0.085 Sum_probs=43.4
Q ss_pred HHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCc-----------------hhHHHHHHHHHHHHHHhcchhccc
Q 016386 307 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFS-----------------VNLMQTREKLIKGYIHSSILCLGC 369 (390)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~-----------------~~~~~~~~~l~~~y~~~~~~~~~~ 369 (390)
++.++--+..+...++|-.|...|++++...+.+.-..+ ..=.++|..++.+|++++.++.+=
T Consensus 63 ~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai 142 (167)
T 3ffl_A 63 YQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAI 142 (167)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHH
Confidence 334444556677788999999999998876654421111 112478999999999999987654
Q ss_pred c
Q 016386 370 S 370 (390)
Q Consensus 370 ~ 370 (390)
+
T Consensus 143 ~ 143 (167)
T 3ffl_A 143 A 143 (167)
T ss_dssp H
T ss_pred H
Confidence 4
No 73
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=44.45 E-value=12 Score=26.51 Aligned_cols=34 Identities=18% Similarity=0.166 Sum_probs=25.4
Q ss_pred hhhhccccCCCCCcceeeeCCCCCccccCcCCCccC
Q 016386 261 AILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 296 (390)
Q Consensus 261 ~~l~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~ 296 (390)
.+++-+.|| .|+|.+..........|..||....
T Consensus 6 ~LLeiL~CP--~ck~~L~~~~~~g~LvC~~c~~~YP 39 (67)
T 2jny_A 6 QLLEVLACP--KDKGPLRYLESEQLLVNERLNLAYR 39 (67)
T ss_dssp GGTCCCBCT--TTCCBCEEETTTTEEEETTTTEEEE
T ss_pred HHHHHhCCC--CCCCcCeEeCCCCEEEcCCCCcccc
Confidence 456778897 7988887665566678999987654
No 74
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=42.58 E-value=68 Score=24.67 Aligned_cols=40 Identities=8% Similarity=-0.100 Sum_probs=19.3
Q ss_pred CCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhc
Q 016386 320 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 320 ~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
.|++++|+..|+.++.. .|.++. +...+..+|..+|+...
T Consensus 65 ~g~~~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~~g~~~~ 104 (142)
T 2xcb_A 65 LGLYEQALQSYSYGALM-----DINEPR---FPFHAAECHLQLGDLDG 104 (142)
T ss_dssp TTCHHHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHHTTCHHH
T ss_pred HhhHHHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHHcCCHHH
Confidence 44555555555554432 243332 33455556666655543
No 75
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=42.38 E-value=54 Score=30.75 Aligned_cols=68 Identities=9% Similarity=-0.056 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcc--------cCCCchhHHHHHHHHHHHHHHhcchhc
Q 016386 300 IKKIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKL--------YHPFSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 300 v~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~--------lhp~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
.......+..+...+......+++++|++.|++++...... ....+.....+...++.+|..+|.+..
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~ 291 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQG 291 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHH
Confidence 34445556666777777778899999999999988743321 001344566778888889988888743
No 76
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=41.58 E-value=91 Score=23.88 Aligned_cols=24 Identities=4% Similarity=0.065 Sum_probs=11.1
Q ss_pred HHHHhhhcCCCHHHHHHHHHHHHH
Q 016386 312 KKTLALTSCGNHQEVVSTYKMIEK 335 (390)
Q Consensus 312 ~~~~~~~~~~~~~~a~~~~~~~~~ 335 (390)
..+......+++++|+..++.++.
T Consensus 18 ~~a~~~~~~~~~~~A~~~~~~al~ 41 (166)
T 1a17_A 18 TQANDYFKAKDYENAIKFYSQAIE 41 (166)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHH
Confidence 333333344555555555554443
No 77
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=41.27 E-value=1e+02 Score=22.59 Aligned_cols=34 Identities=15% Similarity=0.149 Sum_probs=25.6
Q ss_pred HHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcc
Q 016386 307 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKL 340 (390)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 340 (390)
+..++.+|......|++++|+.+|...+......
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~a 49 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGIDLLLQV 49 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 3456667777778999999999999877665443
No 78
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=41.27 E-value=57 Score=29.01 Aligned_cols=51 Identities=10% Similarity=0.006 Sum_probs=38.8
Q ss_pred HHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 308 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
...+..+......|++++|+..|++++.. .|.|. .++..|+.+|...|...
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~-----~P~~~---~a~~~la~~~~~~g~~~ 168 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQL-----SNQNG---EIGLLLAETLIALNRSE 168 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----TTSCH---HHHHHHHHHHHHTTCHH
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHh-----CCcch---hHHHHHHHHHHHCCCHH
Confidence 34456666667789999999999988764 46664 57888899999888764
No 79
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=41.07 E-value=39 Score=28.07 Aligned_cols=60 Identities=7% Similarity=0.003 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcccCC--Cch--hHHHHHHHHHHHHHHhcch
Q 016386 306 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHP--FSV--NLMQTREKLIKGYIHSSIL 365 (390)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp--~~~--~~~~~~~~l~~~y~~~~~~ 365 (390)
++......+..+...|++++|+..|..++......... .+. .-..+...+..++..+|++
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~ 73 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSF 73 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCH
Confidence 44556667777777899999999999998876441000 011 1233677777788888876
No 80
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=40.12 E-value=75 Score=24.97 Aligned_cols=41 Identities=7% Similarity=0.043 Sum_probs=21.6
Q ss_pred cCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhc
Q 016386 319 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 319 ~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
..|++++|++.|+.++.+ .|.++ .+...++.+|..+|....
T Consensus 67 ~~g~~~~A~~~~~~al~l-----~p~~~---~~~~~lg~~~~~~g~~~~ 107 (148)
T 2vgx_A 67 AMGQYDLAIHSYSYGAVM-----DIXEP---RFPFHAAECLLQXGELAE 107 (148)
T ss_dssp HTTCHHHHHHHHHHHHHH-----STTCT---HHHHHHHHHHHHTTCHHH
T ss_pred HHhhHHHHHHHHHHHHhc-----CCCCc---hHHHHHHHHHHHcCCHHH
Confidence 345566666666555442 24443 234555666666666543
No 81
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=39.92 E-value=12 Score=26.65 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=24.6
Q ss_pred hhhccccCCCCCcceeeeCCCCCccccCcCCCccC
Q 016386 262 ILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 296 (390)
Q Consensus 262 ~l~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~ 296 (390)
+++-+.|| .|+|.+..........|..||....
T Consensus 5 LL~iL~CP--~ck~~L~~~~~~~~LiC~~cg~~YP 37 (68)
T 2jr6_A 5 FLDILVCP--VTKGRLEYHQDKQELWSRQAKLAYP 37 (68)
T ss_dssp SSCCCBCS--SSCCBCEEETTTTEEEETTTTEEEE
T ss_pred HhhheECC--CCCCcCeEeCCCCEEEcCCCCcEec
Confidence 45678897 7888877665556678999987654
No 82
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=39.76 E-value=13 Score=26.68 Aligned_cols=33 Identities=21% Similarity=0.353 Sum_probs=24.8
Q ss_pred hhhccccCCCCCcceeeeCCCCCccccCcCCCccC
Q 016386 262 ILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 296 (390)
Q Consensus 262 ~l~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~ 296 (390)
+++-+.|| .|+|.+..........|..||....
T Consensus 5 LL~iL~CP--~ck~~L~~~~~~~~LiC~~cg~~YP 37 (70)
T 2js4_A 5 LLDILVCP--VCKGRLEFQRAQAELVCNADRLAFP 37 (70)
T ss_dssp CCCCCBCT--TTCCBEEEETTTTEEEETTTTEEEE
T ss_pred HhhheECC--CCCCcCEEeCCCCEEEcCCCCceec
Confidence 45678897 7988887665566678999997654
No 83
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=38.85 E-value=11 Score=26.73 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=24.7
Q ss_pred hhhccccCCCCCcceeeeCCCCCccccCcCCCccC
Q 016386 262 ILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 296 (390)
Q Consensus 262 ~l~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~ 296 (390)
+++-+.|| .|+|.+..........|..||....
T Consensus 5 LL~iL~CP--~ck~~L~~~~~~~~LiC~~cg~~YP 37 (68)
T 2hf1_A 5 FLEILVCP--LCKGPLVFDKSKDELICKGDRLAFP 37 (68)
T ss_dssp CEEECBCT--TTCCBCEEETTTTEEEETTTTEEEE
T ss_pred HhhheECC--CCCCcCeEeCCCCEEEcCCCCcEec
Confidence 45678897 7888877665566678999997654
No 84
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=38.64 E-value=1.1e+02 Score=22.02 Aligned_cols=41 Identities=10% Similarity=-0.027 Sum_probs=20.9
Q ss_pred cCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhc
Q 016386 319 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 319 ~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
..+++++|++.++.++.. .|.+ ..+...++.+|..+|.+..
T Consensus 58 ~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~~~~ 98 (131)
T 2vyi_A 58 KLGNYAGAVQDCERAICI-----DPAY---SKAYGRMGLALSSLNKHVE 98 (131)
T ss_dssp HTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHH
T ss_pred HhhchHHHHHHHHHHHhc-----CccC---HHHHHHHHHHHHHhCCHHH
Confidence 345566666555555432 2333 2344555566666665543
No 85
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.00 E-value=14 Score=27.05 Aligned_cols=19 Identities=21% Similarity=0.399 Sum_probs=15.9
Q ss_pred EEEEccccCCCCeeeEecc
Q 016386 204 VVRAVQHVPKGAEVLISYI 222 (390)
Q Consensus 204 ~vrA~r~I~~Geei~isY~ 222 (390)
.|+|.++|++||.|+-.=+
T Consensus 8 slvA~rdI~~Gevit~~dl 26 (79)
T 1wvo_A 8 SVVAKVKIPEGTILTMDML 26 (79)
T ss_dssp EEEESSCBCTTCBCCGGGE
T ss_pred EEEEeCccCCCCCcCHHHe
Confidence 6789999999999986543
No 86
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=37.79 E-value=18 Score=26.09 Aligned_cols=26 Identities=31% Similarity=0.806 Sum_probs=20.8
Q ss_pred CCcccccccCcCC--CCCCCCCCccccCCH
Q 016386 26 SISRCDGCFASSN--LKKCSACQVVWYCGS 53 (390)
Q Consensus 26 ~~~~C~~C~~~~~--~~~C~~C~~~~yCS~ 53 (390)
....|..|-+... .+.| .|+.. ||+.
T Consensus 24 ~~~RC~~C~kkvgL~~f~C-rCg~~-FCs~ 51 (74)
T 1wfp_A 24 TATRCLSCNKKVGVTGFKC-RCGST-FCGT 51 (74)
T ss_dssp CCCBCSSSCCBCTTTCEEC-TTSCE-ECTT
T ss_pred cCccchhhcCcccccceEe-ccCCE-eccc
Confidence 4688999998854 5789 79985 9983
No 87
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=37.67 E-value=74 Score=23.97 Aligned_cols=41 Identities=7% Similarity=0.005 Sum_probs=26.8
Q ss_pred cCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhc
Q 016386 319 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 319 ~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
..|++++|+..+++++.+ .|.+. .+...|+.+|..+|+...
T Consensus 63 ~~g~~~~A~~~~~~al~l-----~P~~~---~~~~~la~~~~~~g~~~~ 103 (121)
T 1hxi_A 63 ENEKDGLAIIALNHARML-----DPKDI---AVHAALAVSHTNEHNANA 103 (121)
T ss_dssp HTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHcCCHHH
Confidence 356777777777776653 35544 356677778877777643
No 88
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=37.50 E-value=85 Score=23.56 Aligned_cols=46 Identities=15% Similarity=-0.045 Sum_probs=22.3
Q ss_pred cCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 319 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 319 ~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
..|++++|++.++.++.... -.+.......+...++.+|..+|...
T Consensus 61 ~~g~~~~A~~~~~~a~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~ 106 (164)
T 3ro3_A 61 FLGEFETASEYYKKTLLLAR--QLKDRAVEAQSCYSLGNTYTLLQDYE 106 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HcCCHHHHHHHHHHHHHHHH--HhCCcHHHHHHHHHHHHHHHHHhhHH
Confidence 44555555555555544332 23333344555555555555555544
No 89
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=37.50 E-value=99 Score=23.41 Aligned_cols=54 Identities=7% Similarity=0.002 Sum_probs=39.1
Q ss_pred HHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhcc
Q 016386 314 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCLG 368 (390)
Q Consensus 314 ~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~~ 368 (390)
+.-....|++++|++.++.++..... ..+.+..+..+...+..+|..+|++..+
T Consensus 49 g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~lg~~~~~~~~~~~A 102 (127)
T 4gcn_A 49 AAVYFEEKKFAECVQFCEKAVEVGRE-TRADYKLIAKAMSRAGNAFQKQNDLSLA 102 (127)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhCcc-cchhhHHHHHHHHHHHHHHHHcCCHHHH
Confidence 33445678999999999988776543 2334456777888888899888887544
No 90
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=37.44 E-value=36 Score=31.70 Aligned_cols=59 Identities=8% Similarity=-0.110 Sum_probs=39.6
Q ss_pred HHHHHHhhhcCCCHHHHHHHHHHHHHhhhcc---------cCCCchhHHHHHHHHHHHHHHhcchhcc
Q 016386 310 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKL---------YHPFSVNLMQTREKLIKGYIHSSILCLG 368 (390)
Q Consensus 310 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~---------lhp~~~~~~~~~~~l~~~y~~~~~~~~~ 368 (390)
.++++.++...|++++|++.|..+++..... .........++...|+.+|.+.|++...
T Consensus 7 ~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a 74 (434)
T 4b4t_Q 7 KLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKL 74 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHH
Confidence 3455666667789999999999988765432 1111223345567788899998888543
No 91
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=36.75 E-value=13 Score=29.52 Aligned_cols=35 Identities=23% Similarity=0.627 Sum_probs=22.2
Q ss_pred ecCCCCCcccccccCcCC----CCCCCCCCccccCCHHHHH
Q 016386 21 PNNSSSISRCDGCFASSN----LKKCSACQVVWYCGSNCQK 57 (390)
Q Consensus 21 ~~~~~~~~~C~~C~~~~~----~~~C~~C~~~~yCS~~C~~ 57 (390)
+.+......|..|..... ..-|..|+.+ ||+ .|..
T Consensus 13 ~~Pd~~~~~C~~C~~~Fs~~~RkHHCR~CG~i-fC~-~Cs~ 51 (120)
T 1y02_A 13 PSPTGLEPSCKSCGAHFANTARKQTCLDCKKN-FCM-TCSS 51 (120)
T ss_dssp -------CCCTTTCCCCSSGGGCEECTTTCCE-ECG-GGEE
T ss_pred CcCccccCcccCcCCccccccccccCCCCCCe-eCH-HHhC
Confidence 334455678999988843 4569999997 997 6753
No 92
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=36.57 E-value=1.1e+02 Score=22.30 Aligned_cols=55 Identities=4% Similarity=-0.189 Sum_probs=37.8
Q ss_pred HHHHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 311 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 311 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
++-+...+..+++..|+.-|+.++++...--. .......+...|+.+|..+|...
T Consensus 9 ~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~~~g~~~ 63 (104)
T 2v5f_A 9 FELGKVAYTEADYYHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVYQQGDLD 63 (104)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHccchHHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHHHccCHH
Confidence 34445556678999999999988766532211 12345677789999999998763
No 93
>1pg5_B Aspartate carbamoyltransferase regulatory chain; 2.60A {Sulfolobus acidocaldarius} SCOP: d.58.2.1 g.41.7.1 PDB: 2be9_B*
Probab=36.50 E-value=19 Score=30.26 Aligned_cols=19 Identities=21% Similarity=0.490 Sum_probs=15.5
Q ss_pred CCccccCcCCCccCHHHHH
Q 016386 283 DKGFTCQQCGLVRSKEEIK 301 (390)
Q Consensus 283 ~~~~~C~~C~~~~~~~~v~ 301 (390)
...++|..|++..+.+++.
T Consensus 141 ~~~lrC~YCe~~~~~~~i~ 159 (168)
T 1pg5_B 141 PLKMRCEYCETIIDENEIM 159 (168)
T ss_dssp TTEEEETTTCCEEEHHHHH
T ss_pred CCEEEeeCCCCEecHhHHh
Confidence 4458999999999877766
No 94
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=36.49 E-value=1e+02 Score=23.07 Aligned_cols=50 Identities=6% Similarity=-0.137 Sum_probs=39.5
Q ss_pred hhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhcc
Q 016386 317 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCLG 368 (390)
Q Consensus 317 ~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~~ 368 (390)
....+++++|++.++.++..... +..+.....+...++.+|..+|....+
T Consensus 99 ~~~~~~~~~A~~~~~~a~~~~~~--~~~~~~~~~~~~~la~~~~~~g~~~~A 148 (164)
T 3ro3_A 99 YTLLQDYEKAIDYHLKHLAIAQE--LKDRIGEGRACWSLGNAYTALGNHDQA 148 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHH--ccchHhHHHHHHHHHHHHHHccCHHHH
Confidence 44678999999999888877654 366677888999999999999887643
No 95
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=36.24 E-value=19 Score=24.91 Aligned_cols=44 Identities=23% Similarity=0.280 Sum_probs=29.8
Q ss_pred EeCCeeeeecCCCCCcccccccCcC-----CCCCCCCCCccccCCHHHHHH
Q 016386 13 SQEPYVCVPNNSSSISRCDGCFASS-----NLKKCSACQVVWYCGSNCQKL 58 (390)
Q Consensus 13 ~e~P~~~~~~~~~~~~~C~~C~~~~-----~~~~C~~C~~~~yCS~~C~~~ 58 (390)
...|-.+.+..-...+.|++|...+ ....|..|++. |-+.|...
T Consensus 6 ~~~~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~--~Hk~C~~~ 54 (65)
T 3uej_A 6 SVGSHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMN--VHHKCREK 54 (65)
T ss_dssp EEEECCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCE--ECHHHHTT
T ss_pred EeCCceEEeEeCCCCCcccccChhhhccCceeeECCCCCCe--EchhHhhh
Confidence 3334444444445689999998773 35789999974 88888653
No 96
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=35.75 E-value=82 Score=23.42 Aligned_cols=40 Identities=8% Similarity=-0.030 Sum_probs=20.8
Q ss_pred cCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 319 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 319 ~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
..+++++|+..++.++.. .|.+ ..+...++.+|..+|...
T Consensus 55 ~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~~~~~~ 94 (137)
T 3q49_B 55 KMQQPEQALADCRRALEL-----DGQS---VKAHFFLGQCQLEMESYD 94 (137)
T ss_dssp HTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHH
T ss_pred HhcCHHHHHHHHHHHHHh-----Cchh---HHHHHHHHHHHHHHhhHH
Confidence 345566666555555442 2332 234555666666666554
No 97
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=35.56 E-value=20 Score=25.10 Aligned_cols=26 Identities=31% Similarity=0.715 Sum_probs=20.6
Q ss_pred CCcccccccCcCC--CCCCCCCCccccCCH
Q 016386 26 SISRCDGCFASSN--LKKCSACQVVWYCGS 53 (390)
Q Consensus 26 ~~~~C~~C~~~~~--~~~C~~C~~~~yCS~ 53 (390)
....|..|-+... .+.| .|+.. ||+.
T Consensus 14 ~~~rC~~C~kkvgl~~f~C-rCg~~-FC~~ 41 (64)
T 1wfh_A 14 RPNRCTVCRKRVGLTGFMC-RCGTT-FCGS 41 (64)
T ss_dssp SCCCCTTTCCCCCTTCEEC-SSSCE-ECTT
T ss_pred cCCcChhhCCccCccCEEe-ecCCE-eccc
Confidence 4688999999854 5789 69985 9983
No 98
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=35.54 E-value=1e+02 Score=22.24 Aligned_cols=47 Identities=9% Similarity=0.060 Sum_probs=30.7
Q ss_pred HHHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 312 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 312 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
..+......+++++|+..++.++... |.+. .+...++.+|..+|.+.
T Consensus 9 ~l~~~~~~~~~~~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~~~~~~~ 55 (131)
T 1elr_A 9 ELGNDAYKKKDFDTALKHYDKAKELD-----PTNM---TYITNQAAVYFEKGDYN 55 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcC-----CccH---HHHHHHHHHHHHhccHH
Confidence 33444456778999988888876543 4443 45566777777777664
No 99
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=35.46 E-value=1e+02 Score=28.14 Aligned_cols=52 Identities=8% Similarity=-0.061 Sum_probs=40.7
Q ss_pred HHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 313 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 313 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
.+.-....|++++|++.++.++.....+ +.+.....+...++.+|..+|...
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~~~~~ 160 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFV--KDRIEKAEFFFKMSESYYYMKQTY 160 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhC--CCHHHHHHHHHHHHHHHHHcCCHH
Confidence 4555567889999999999998776554 555667888899999998888764
No 100
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=34.81 E-value=14 Score=24.51 Aligned_cols=25 Identities=24% Similarity=0.804 Sum_probs=16.5
Q ss_pred ccCCCCCcc-eeeeCCCCCccccCcCCCc
Q 016386 267 RCKDDGCSG-FLLRDSDDKGFTCQQCGLV 294 (390)
Q Consensus 267 ~C~~~~C~g-~~~~~~~~~~~~C~~C~~~ 294 (390)
.|| .|++ .+..+ ....+.|.+||.+
T Consensus 21 ~CP--~CG~~~fm~~-~~~R~~C~kCG~t 46 (50)
T 3j20_Y 21 FCP--RCGPGVFMAD-HGDRWACGKCGYT 46 (50)
T ss_dssp ECS--SSCSSCEEEE-CSSEEECSSSCCE
T ss_pred cCC--CCCCceEEec-CCCeEECCCCCCE
Confidence 487 6864 33332 3467999999975
No 101
>2be7_D Aspartate carbamoyltransferase regulatory chain; atcase, psychrophilic, cold adaptation, alloste holoenzyme; 2.85A {Moritella profunda}
Probab=33.73 E-value=14 Score=30.68 Aligned_cols=18 Identities=28% Similarity=0.591 Sum_probs=13.9
Q ss_pred CccccCcCCCccCHHHHH
Q 016386 284 KGFTCQQCGLVRSKEEIK 301 (390)
Q Consensus 284 ~~~~C~~C~~~~~~~~v~ 301 (390)
..++|..|++..+.+++.
T Consensus 133 ~~lrC~YCe~~~~~~~i~ 150 (153)
T 2be7_D 133 IGLKCKYCEKTFSKDIVT 150 (153)
T ss_dssp EEEEETTTCCEEEHHHHH
T ss_pred CEEEeeCCCCEechhhHh
Confidence 347899999998866554
No 102
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=33.10 E-value=1.3e+02 Score=21.19 Aligned_cols=49 Identities=14% Similarity=0.067 Sum_probs=36.4
Q ss_pred HHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcch
Q 016386 309 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSIL 365 (390)
Q Consensus 309 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~ 365 (390)
.....+......|++++|++.|+.++.. .|.+. .+...++.+|..+|.+
T Consensus 6 ~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~~g~~ 54 (111)
T 2l6j_A 6 KQKEQGNSLFKQGLYREAVHCYDQLITA-----QPQNP---VGYSNKAMALIKLGEY 54 (111)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHHhcCH
Confidence 3445555566788999999999988764 46553 5567888888888876
No 103
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=32.98 E-value=1.1e+02 Score=20.55 Aligned_cols=41 Identities=17% Similarity=0.229 Sum_probs=22.6
Q ss_pred hhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcch
Q 016386 317 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSIL 365 (390)
Q Consensus 317 ~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~ 365 (390)
....+++++|+..++.++.. .|.+. .+...++.+|..+|..
T Consensus 19 ~~~~~~~~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~~~~~ 59 (91)
T 1na3_A 19 YYKQGDYDEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYKQGDY 59 (91)
T ss_dssp HHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCH
T ss_pred HHHccCHHHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHHHhhH
Confidence 33456777777777666543 23332 3445556666666554
No 104
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=32.27 E-value=1.1e+02 Score=22.00 Aligned_cols=49 Identities=4% Similarity=0.011 Sum_probs=34.9
Q ss_pred hhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 317 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 317 ~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
....+++++|+..++.++...... .+.+.....+...++.+|..+|+..
T Consensus 48 ~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~~~~~~~~~ 96 (131)
T 1elr_A 48 YFEKGDYNKCRELCEKAIEVGREN-REDYRQIAKAYARIGNSYFKEEKYK 96 (131)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHhccHHHHHHHHHHHHhhcccc-chhHHHHHHHHHHHHHHHHHhccHH
Confidence 345679999999999887665321 2333444778888999999888874
No 105
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=32.27 E-value=86 Score=26.84 Aligned_cols=45 Identities=11% Similarity=-0.005 Sum_probs=35.2
Q ss_pred HHHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHH
Q 016386 312 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIH 361 (390)
Q Consensus 312 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~ 361 (390)
..+.-....|++++|+..++.++.. +|.+.....+...++.+|..
T Consensus 57 ~lg~~~~~~~~~~~A~~~~~~~l~~-----~p~~~~~~~a~~~lg~~~~~ 101 (261)
T 3qky_A 57 YLARAYYQNKEYLLAASEYERFIQI-----YQIDPRVPQAEYERAMCYYK 101 (261)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHH-----CCCCchhHHHHHHHHHHHHH
Confidence 3344455678999999999988764 58888888888889999888
No 106
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=31.77 E-value=72 Score=23.33 Aligned_cols=44 Identities=9% Similarity=-0.050 Sum_probs=29.5
Q ss_pred hhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhcc
Q 016386 317 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCLG 368 (390)
Q Consensus 317 ~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~~ 368 (390)
....+++++|++.++.++.. .|.+ ..+...++.+|..+|+...+
T Consensus 60 ~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~la~~~~~~~~~~~A 103 (133)
T 2lni_A 60 YTKLLEFQLALKDCEECIQL-----EPTF---IKGYTRKAAALEAMKDYTKA 103 (133)
T ss_dssp HTTTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHH
T ss_pred HHHhccHHHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHHHhhHHHH
Confidence 44567888888888777653 3443 34667778888888876543
No 107
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=31.27 E-value=88 Score=24.51 Aligned_cols=39 Identities=5% Similarity=-0.197 Sum_probs=18.9
Q ss_pred cCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcch
Q 016386 319 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSIL 365 (390)
Q Consensus 319 ~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~ 365 (390)
..+++++|++.++++++. .|++. .+...|..+|..+|..
T Consensus 43 ~~~~~~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 43 EAKEYDLAKKYICTYINV-----QERDP---KAHRFLGLLYELEENT 81 (150)
T ss_dssp HTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCH
T ss_pred HcCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHcCch
Confidence 345566666555555442 24332 3444455555555544
No 108
>2con_A RUH-035 protein, NIN one binding protein; ribosome, RNA binding protein, unknown function, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.15.1
Probab=31.06 E-value=22 Score=26.10 Aligned_cols=22 Identities=41% Similarity=0.916 Sum_probs=17.0
Q ss_pred CcccccccCcC---CCCCCCCCCcc
Q 016386 27 ISRCDGCFASS---NLKKCSACQVV 48 (390)
Q Consensus 27 ~~~C~~C~~~~---~~~~C~~C~~~ 48 (390)
-..|+.||+.. +...||.|+..
T Consensus 15 iLrC~aCf~~t~~~~k~FCp~CGn~ 39 (79)
T 2con_A 15 ILRCHGCFKTTSDMNRVFCGHCGNK 39 (79)
T ss_dssp EEECSSSCCEESCSSCCSCSSSCCS
T ss_pred eeEecccceECCCcccccccccCcc
Confidence 46799999983 46789999753
No 109
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=30.92 E-value=93 Score=25.82 Aligned_cols=56 Identities=16% Similarity=0.148 Sum_probs=36.8
Q ss_pred HHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhH-------------HHHHHHHHHHHHHhcchhc
Q 016386 307 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNL-------------MQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~-------------~~~~~~l~~~y~~~~~~~~ 367 (390)
+..++.++......|++++|+..++.++... |.+... ..+...++.+|..+|....
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-----p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~ 72 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALN-----IDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDK 72 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----HHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-----CCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHH
Confidence 3455667777778899999999999887643 333221 1122337888888887643
No 110
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=30.82 E-value=38 Score=26.04 Aligned_cols=29 Identities=17% Similarity=0.496 Sum_probs=17.3
Q ss_pred ccccCCCCCcceeeeCCCCCccccCcCCCcc
Q 016386 265 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVR 295 (390)
Q Consensus 265 ~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~ 295 (390)
.+.|+ .|+..-+......-|.|..|+..+
T Consensus 36 ky~Cp--fCgk~~vKR~a~GIW~C~kCg~~~ 64 (103)
T 4a17_Y 36 KYGCP--FCGKVAVKRAAVGIWKCKPCKKII 64 (103)
T ss_dssp CEECT--TTCCEEEEEEETTEEEETTTTEEE
T ss_pred CCCCC--CCCCceeeecCcceEEcCCCCCEE
Confidence 45675 665332222334679999998755
No 111
>1brv_A Protein G, BRSV-G region; attachment protein G of bovine respiratory syncytial virus, immunoglobulin-binding protein; NMR {Bovine respiratory syncytial virus} SCOP: j.33.1.1
Probab=30.52 E-value=16 Score=21.66 Aligned_cols=21 Identities=29% Similarity=0.488 Sum_probs=17.0
Q ss_pred CCCCCCCCCCccccCCHHHHH
Q 016386 37 SNLKKCSACQVVWYCGSNCQK 57 (390)
Q Consensus 37 ~~~~~C~~C~~~~yCS~~C~~ 57 (390)
.+.+||+.|..-.-|..-|+.
T Consensus 11 l~~VPCsiC~~N~~C~slCq~ 31 (32)
T 1brv_A 11 LPYVPCSTCEGNLACLSLCHI 31 (32)
T ss_pred cccccccccCCChhHHHHhhc
Confidence 568999999887788887763
No 112
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=30.40 E-value=1.3e+02 Score=27.34 Aligned_cols=57 Identities=12% Similarity=0.030 Sum_probs=41.8
Q ss_pred HHHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchh-HHHHHHHHHHHHHHhcchhc
Q 016386 306 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~-~~~~~~~l~~~y~~~~~~~~ 367 (390)
....++..+......|++++|+..++.++.. .|.+.. ...+...++.+|..+|.+..
T Consensus 47 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~-----~~~~~~~~~~~~~~lg~~~~~~g~~~~ 104 (411)
T 4a1s_A 47 MCLELALEGERLCNAGDCRAGVAFFQAAIQA-----GTEDLRTLSAIYSQLGNAYFYLGDYNK 104 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHh-----cccChhHHHHHHHHHHHHHHHCCCHHH
Confidence 3444555666667789999999999988775 465553 45778888889988887743
No 113
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=30.30 E-value=11 Score=27.18 Aligned_cols=30 Identities=27% Similarity=0.586 Sum_probs=21.1
Q ss_pred ccccCCCCCcceeeeCCCCCccccCcCCCccCHH
Q 016386 265 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRSKE 298 (390)
Q Consensus 265 ~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~~~ 298 (390)
.++|+ |+...........-+|. ||+.+..+
T Consensus 4 vv~C~---C~~~~~~~~~~kT~~C~-CG~~~~~~ 33 (71)
T 1gh9_A 4 IFRCD---CGRALYSREGAKTRKCV-CGRTVNVK 33 (71)
T ss_dssp EEEET---TSCCEEEETTCSEEEET-TTEEEECC
T ss_pred EEECC---CCCEEEEcCCCcEEECC-CCCeeeec
Confidence 46884 87776655555566898 99987643
No 114
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=30.21 E-value=27 Score=24.48 Aligned_cols=26 Identities=35% Similarity=0.764 Sum_probs=20.7
Q ss_pred CCcccccccCcCC--CCCCCCCCccccCCH
Q 016386 26 SISRCDGCFASSN--LKKCSACQVVWYCGS 53 (390)
Q Consensus 26 ~~~~C~~C~~~~~--~~~C~~C~~~~yCS~ 53 (390)
....|..|-+.+. .+.| .|+.. ||+.
T Consensus 14 ~~~rC~~C~kkvgl~~f~C-rCg~~-FC~~ 41 (64)
T 1wg2_A 14 PNNRCFSCNKKVGVMGFKC-KCGST-FCGS 41 (64)
T ss_dssp CSCSCTTTCCCCTTSCEEC-TTSCE-ECSS
T ss_pred cCCcChhhCCcccccCeEe-ecCCE-eccc
Confidence 4678999999854 5789 89985 9983
No 115
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=30.04 E-value=1.2e+02 Score=21.86 Aligned_cols=43 Identities=7% Similarity=-0.076 Sum_probs=29.9
Q ss_pred hhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhc
Q 016386 317 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 317 ~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
....|++++|+..++.++.. .|.+ ..+...|+.+|..+|....
T Consensus 29 ~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~g~~~~ 71 (115)
T 2kat_A 29 YAEHEQFDAALPHLRAALDF-----DPTY---SVAWKWLGKTLQGQGDRAG 71 (115)
T ss_dssp HHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHH
T ss_pred HHHccCHHHHHHHHHHHHHH-----CCCc---HHHHHHHHHHHHHcCCHHH
Confidence 44577899999888887764 3544 3355677888888777643
No 116
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=29.82 E-value=26 Score=26.00 Aligned_cols=26 Identities=23% Similarity=0.570 Sum_probs=20.6
Q ss_pred CCcccccccCcCC---CCCCCCCCccccCCH
Q 016386 26 SISRCDGCFASSN---LKKCSACQVVWYCGS 53 (390)
Q Consensus 26 ~~~~C~~C~~~~~---~~~C~~C~~~~yCS~ 53 (390)
....|..|-+... .+.|. |+.. ||+.
T Consensus 24 ~~~rC~~C~kkvgl~~~f~Cr-Cg~~-FC~~ 52 (85)
T 1wff_A 24 IMKHCFLCGKKTGLATSFECR-CGNN-FCAS 52 (85)
T ss_dssp CCCBCSSSCCBCSSSSCEECT-TCCE-ECTT
T ss_pred cCccchhhCCeecccCCeEcC-CCCE-eccc
Confidence 4689999999843 67895 9985 9983
No 117
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=29.49 E-value=1.3e+02 Score=27.13 Aligned_cols=50 Identities=12% Similarity=-0.229 Sum_probs=38.4
Q ss_pred hhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 317 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 317 ~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
....|++++|+..++..+......-.+.++....+...++.+|...|+..
T Consensus 103 ~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 152 (373)
T 1hz4_A 103 LFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLD 152 (373)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHH
Confidence 44678999999999998887766655555666777778888888888763
No 118
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=29.37 E-value=34 Score=24.83 Aligned_cols=30 Identities=37% Similarity=0.882 Sum_probs=21.4
Q ss_pred ccccCCCCCcceeeeCCCCCccccC-----cCCCc
Q 016386 265 GYRCKDDGCSGFLLRDSDDKGFTCQ-----QCGLV 294 (390)
Q Consensus 265 ~~~C~~~~C~g~~~~~~~~~~~~C~-----~C~~~ 294 (390)
...||.+.|+..+....+.....|. .||..
T Consensus 25 ~~~CP~p~C~~~v~~~~~~~~v~C~~~~~~~C~~~ 59 (80)
T 2jmo_A 25 GVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGFA 59 (80)
T ss_dssp SCCCCSSSCCCCCCCCSCTTSBCTTSSSTTCCSCC
T ss_pred cEECCCCCCCcccEECCCCCcCCCCCCCCCCCCCe
Confidence 4679988898777655555567787 78764
No 119
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=29.36 E-value=33 Score=24.59 Aligned_cols=30 Identities=20% Similarity=0.449 Sum_probs=19.2
Q ss_pred ccccCCCCCcceeeeCCCCCccccCcCCCccC
Q 016386 265 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 296 (390)
Q Consensus 265 ~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~ 296 (390)
.+.|+ .|+..-+......-|+|.+|+..+.
T Consensus 26 ky~C~--fCgk~~vkR~a~GIW~C~~C~~~~A 55 (72)
T 3jyw_9 26 RYDCS--FCGKKTVKRGAAGIWTCSCCKKTVA 55 (72)
T ss_dssp CBCCS--SCCSSCBSBCSSSCBCCSSSCCCCC
T ss_pred CccCC--CCCCceeEecCCCeEECCCCCCEEe
Confidence 46675 6754333333456799999998764
No 120
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=29.18 E-value=1.1e+02 Score=28.74 Aligned_cols=24 Identities=8% Similarity=0.070 Sum_probs=10.7
Q ss_pred HHHHhhhcCCCHHHHHHHHHHHHH
Q 016386 312 KKTLALTSCGNHQEVVSTYKMIEK 335 (390)
Q Consensus 312 ~~~~~~~~~~~~~~a~~~~~~~~~ 335 (390)
..+......|++++|++.|+.++.
T Consensus 11 ~~g~~~~~~g~~~~A~~~~~~al~ 34 (514)
T 2gw1_A 11 DKGNQFFRNKKYDDAIKYYNWALE 34 (514)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHh
Confidence 333333344455555544444443
No 121
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=29.08 E-value=1.3e+02 Score=22.47 Aligned_cols=46 Identities=11% Similarity=0.064 Sum_probs=32.2
Q ss_pred HHHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcch
Q 016386 312 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSIL 365 (390)
Q Consensus 312 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~ 365 (390)
+.+..+...|++++|+..++.++.. .|.+. .+...|..+|..+|..
T Consensus 22 ~~g~~~~~~g~~~~A~~~~~~al~~-----~P~~~---~a~~~lg~~~~~~g~~ 67 (121)
T 1hxi_A 22 EEGLSMLKLANLAEAALAFEAVCQK-----EPERE---EAWRSLGLTQAENEKD 67 (121)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHHcCCH
Confidence 4444455678999999999888764 46554 4556777777777765
No 122
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.57 E-value=1.8e+02 Score=21.56 Aligned_cols=46 Identities=2% Similarity=-0.179 Sum_probs=31.8
Q ss_pred HHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhc
Q 016386 314 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 314 ~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
+.-....+++++|+..++.++.. +|.+ ..+...++.+|..+|....
T Consensus 72 a~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~ 117 (148)
T 2dba_A 72 AACHLKLEDYDKAETEASKAIEK-----DGGD---VKALYRRSQALEKLGRLDQ 117 (148)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH-----TSCC---HHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHccHHHHHHHHHHHHhh-----CccC---HHHHHHHHHHHHHcCCHHH
Confidence 33344577899999988887654 4555 4556677888888877643
No 123
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=28.30 E-value=1.3e+02 Score=23.40 Aligned_cols=17 Identities=6% Similarity=0.034 Sum_probs=10.1
Q ss_pred cCCCHHHHHHHHHHHHH
Q 016386 319 SCGNHQEVVSTYKMIEK 335 (390)
Q Consensus 319 ~~~~~~~a~~~~~~~~~ 335 (390)
..+++++|++.|+.++.
T Consensus 91 ~~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 91 DMADYKGAKEAYEKGIE 107 (164)
T ss_dssp HTTCHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHH
Confidence 44566666666666554
No 124
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=28.09 E-value=47 Score=23.81 Aligned_cols=31 Identities=23% Similarity=0.413 Sum_probs=18.7
Q ss_pred CccccCcCCCccC-HHHHHHHHHHHHHHHHHH
Q 016386 284 KGFTCQQCGLVRS-KEEIKKIASEVNILSKKT 314 (390)
Q Consensus 284 ~~~~C~~C~~~~~-~~~v~~~~~~~~~~~~~~ 314 (390)
..|.|+.||...- .++.+++.+.+.++.+++
T Consensus 35 p~~~C~~CGE~~~~~e~~~~~~~~~~~f~~~v 66 (78)
T 3ga8_A 35 HGLYCVHCEESIMNKEESDAFMAQVKAFRASV 66 (78)
T ss_dssp EEEEETTTCCEECCHHHHHHHHHHHHHHHHHH
T ss_pred eeEECCCCCCEEECHHHHHHHHHHHHHHHHHH
Confidence 4689999998864 555555444444433333
No 125
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=28.01 E-value=22 Score=32.00 Aligned_cols=25 Identities=32% Similarity=0.861 Sum_probs=20.4
Q ss_pred CcccccccCcCC------------CCCCCCCCccccC
Q 016386 27 ISRCDGCFASSN------------LKKCSACQVVWYC 51 (390)
Q Consensus 27 ~~~C~~C~~~~~------------~~~C~~C~~~~yC 51 (390)
...|.+|+-.++ .+.||.|+...|=
T Consensus 198 ~~~C~GC~~~lppq~~~~i~~~~~Iv~Cp~CgRIL~~ 234 (256)
T 3na7_A 198 KQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILYA 234 (256)
T ss_dssp TTBCTTTCCBCCHHHHHHHHHSSSCEECTTTCCEEEC
T ss_pred CCccCCCCeeeCHHHHHHHHCCCCEEECCCCCeeEEe
Confidence 578999999853 5789999987774
No 126
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=27.88 E-value=94 Score=27.45 Aligned_cols=39 Identities=8% Similarity=-0.050 Sum_probs=19.3
Q ss_pred CCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 320 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 320 ~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
.+++++|+..++.++. ++|.+. .+...++.+|..+|.+.
T Consensus 51 ~~~~~~A~~~~~~al~-----~~p~~~---~~~~~lg~~~~~~g~~~ 89 (281)
T 2c2l_A 51 MQQPEQALADCRRALE-----LDGQSV---KAHFFLGQCQLEMESYD 89 (281)
T ss_dssp TTCHHHHHHHHHHHTT-----SCTTCH---HHHHHHHHHHHHTTCHH
T ss_pred hcCHHHHHHHHHHHHH-----hCCCCH---HHHHHHHHHHHHcCCHH
Confidence 4455555555544432 234332 34455566666666553
No 127
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=27.64 E-value=1.3e+02 Score=24.01 Aligned_cols=48 Identities=10% Similarity=0.090 Sum_probs=29.2
Q ss_pred HHHHHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcch
Q 016386 310 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSIL 365 (390)
Q Consensus 310 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~ 365 (390)
.+..+..+...|++++|+..|+.++.. .|.+.. +...|..+|..+|..
T Consensus 39 ~~~lg~~~~~~g~~~eA~~~~~~al~~-----~P~~~~---~~~~lg~~~~~~g~~ 86 (151)
T 3gyz_A 39 IYSYAYDFYNKGRIEEAEVFFRFLCIY-----DFYNVD---YIMGLAAIYQIKEQF 86 (151)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHHHccH
Confidence 344455555677888888877776653 355543 345566666666654
No 128
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=27.51 E-value=1.2e+02 Score=26.50 Aligned_cols=54 Identities=7% Similarity=-0.196 Sum_probs=40.6
Q ss_pred HHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhcc
Q 016386 313 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCLG 368 (390)
Q Consensus 313 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~~ 368 (390)
.+.-....|++++|++.+++++..... +..+..+..+...+..+|..+|....+
T Consensus 202 lg~~y~~~~~y~~Al~~~~kal~~~~~--~~~~~~~~~~~~~lg~~y~~~g~~~~A 255 (293)
T 2qfc_A 202 HAKALYLDSRYEESLYQVNKAIEISCR--INSMALIGQLYYQRGECLRKLEYEEAE 255 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHH--TTBCSSHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHh--cCcHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 344455688999999999998776533 345566788889999999999877544
No 129
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=27.35 E-value=49 Score=24.90 Aligned_cols=30 Identities=27% Similarity=0.697 Sum_probs=17.4
Q ss_pred ccccCCCCCcceeeeCCCCCccccCcCCCccC
Q 016386 265 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 296 (390)
Q Consensus 265 ~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~ 296 (390)
.+.|+ .|+..-+......-|.|..|+..+.
T Consensus 36 ky~Cp--fCgk~~vkR~a~GIW~C~~Cg~~~A 65 (92)
T 3iz5_m 36 KYFCE--FCGKFAVKRKAVGIWGCKDCGKVKA 65 (92)
T ss_dssp CBCCT--TTCSSCBEEEETTEEECSSSCCEEE
T ss_pred cccCc--ccCCCeeEecCcceEEcCCCCCEEe
Confidence 45675 5643322222345799999987653
No 130
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=27.35 E-value=1.7e+02 Score=25.13 Aligned_cols=54 Identities=15% Similarity=0.097 Sum_probs=37.7
Q ss_pred HHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchh-HHHHHHHHHHHHHHhcchhc
Q 016386 309 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 309 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~-~~~~~~~l~~~y~~~~~~~~ 367 (390)
.++..+......|++++|+..++.++.. .|.+.. ...+...++.+|...|....
T Consensus 7 ~l~~~g~~~~~~g~~~~A~~~~~~al~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~ 61 (338)
T 3ro2_A 7 ELALEGERLCKSGDCRAGVSFFEAAVQV-----GTEDLKTLSAIYSQLGNAYFYLHDYAK 61 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhh-----CcccHHHHHHHHHHHHHHHHHcCCHHH
Confidence 3445555566788999999999888764 455543 35677788888888777643
No 131
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.00 E-value=23 Score=25.88 Aligned_cols=48 Identities=15% Similarity=0.183 Sum_probs=34.1
Q ss_pred CEEEEeCCeeeeecCCCCCcccccccCcC-----CCCCCCCCCccccCCHHHHHH
Q 016386 9 EVIISQEPYVCVPNNSSSISRCDGCFASS-----NLKKCSACQVVWYCGSNCQKL 58 (390)
Q Consensus 9 e~Il~e~P~~~~~~~~~~~~~C~~C~~~~-----~~~~C~~C~~~~yCS~~C~~~ 58 (390)
+-|....+-.+.+..-...+.|++|-..+ ..+.|..|++. |-..|...
T Consensus 10 ~k~~~~~~H~F~~~~~~~pt~C~~C~~~lwGl~kqg~~C~~C~~~--~Hk~C~~~ 62 (83)
T 2yuu_A 10 AKIHYIKNHEFIATFFGQPTFCSVCKDFVWGLNKQGYKCRQCNAA--IHKKCIDK 62 (83)
T ss_dssp CCEECGGGCCEEEECCSSCCCCSSSCCCCCSSSCCEEEETTTCCE--ECTTGGGT
T ss_pred hhCcccCCCceEeEeCCCCcChhhcChhhccccccccccCCcCCe--eChhhhhh
Confidence 33445566666665556789999998874 25679999975 88888753
No 132
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=26.84 E-value=35 Score=22.49 Aligned_cols=30 Identities=17% Similarity=0.461 Sum_probs=18.5
Q ss_pred CcccccccCcCCCCCCCCCCccccCCHHHHHH
Q 016386 27 ISRCDGCFASSNLKKCSACQVVWYCGSNCQKL 58 (390)
Q Consensus 27 ~~~C~~C~~~~~~~~C~~C~~~~yCS~~C~~~ 58 (390)
..+|..|.+......=. +--.|||..|++.
T Consensus 18 ~~~C~~CG~~i~~~~~~--r~krFCS~sCR~~ 47 (49)
T 2l8e_A 18 LLKCEYCGKYAPAEQFR--GSKRFCSMTCAKR 47 (49)
T ss_dssp EEECTTTCCEEEGGGCT--TTSSSCSHHHHHH
T ss_pred CCcChhccCccccccCC--CCCccCCHHHHhh
Confidence 35799998874321100 1126999999874
No 133
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=26.45 E-value=1e+02 Score=21.50 Aligned_cols=44 Identities=18% Similarity=0.231 Sum_probs=26.8
Q ss_pred hhcCCCHHHHHHHHHHHHHhhhcccCCCchhHH--HHHHHHHHHHHHhcch
Q 016386 317 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLM--QTREKLIKGYIHSSIL 365 (390)
Q Consensus 317 ~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~--~~~~~l~~~y~~~~~~ 365 (390)
....+++++|++.|+.++.. .|.+.... .....+...|-.....
T Consensus 45 ~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~~~~~~~a~~~~~~~~~~ 90 (99)
T 2kc7_A 45 YRKLGDWQKALNNYQSAIEL-----NPDSPALQARKMVMDILNFYNKDMYN 90 (99)
T ss_dssp HHHHTCHHHHHHHHHHHHHH-----CTTSTHHHHHHHHHHHHHHHCCTTHH
T ss_pred HHHcCCHHHHHHHHHHHHhc-----CCCcHHHHHHHHHHHHHHHHHHHhcc
Confidence 44567999999999888764 47666544 3334444444444333
No 134
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=26.45 E-value=1.7e+02 Score=21.40 Aligned_cols=50 Identities=8% Similarity=-0.002 Sum_probs=31.4
Q ss_pred HHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcch
Q 016386 308 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSIL 365 (390)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~ 365 (390)
+...+.+......+++++|+..|+.++.. .|.+. .+...++.+|..+|.+
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~~---~~~~~~a~~~~~~~~~ 54 (126)
T 3upv_A 5 EEARLEGKEYFTKSDWPNAVKAYTEMIKR-----APEDA---RGYSNRAAALAKLMSF 54 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHHhcCH
Confidence 33445555556677888888888777654 34443 4556666777766665
No 135
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=26.44 E-value=1.5e+02 Score=23.10 Aligned_cols=23 Identities=4% Similarity=0.121 Sum_probs=12.1
Q ss_pred HHHhhhcCCCHHHHHHHHHHHHH
Q 016386 313 KTLALTSCGNHQEVVSTYKMIEK 335 (390)
Q Consensus 313 ~~~~~~~~~~~~~a~~~~~~~~~ 335 (390)
.+..+...|++++|+..|+.++.
T Consensus 27 ~g~~~~~~g~~~~A~~~~~~al~ 49 (148)
T 2vgx_A 27 LAFNQYQSGXYEDAHXVFQALCV 49 (148)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHH
Confidence 33334445566666666655543
No 136
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=26.33 E-value=1.4e+02 Score=27.14 Aligned_cols=44 Identities=7% Similarity=-0.078 Sum_probs=21.6
Q ss_pred CCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcch
Q 016386 320 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSIL 365 (390)
Q Consensus 320 ~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~ 365 (390)
.|++++|++.++.++...... +.+.....+...|+.+|..+|+.
T Consensus 197 ~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~g~~ 240 (383)
T 3ulq_A 197 LKQYEDAISHFQKAYSMAEAE--KQPQLMGRTLYNIGLCKNSQSQY 240 (383)
T ss_dssp TTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCH
T ss_pred hcCHHHHHHHHHHHHHHHHHc--CChHHHHHHHHHHHHHHHHCCCH
Confidence 445555555555554443332 33344444555555555555544
No 137
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=26.07 E-value=59 Score=24.00 Aligned_cols=44 Identities=14% Similarity=0.414 Sum_probs=31.1
Q ss_pred EeCCeeeeecCCCCCcccccccCcC-----C--CCCCCCCCccccCCHHHHHH
Q 016386 13 SQEPYVCVPNNSSSISRCDGCFASS-----N--LKKCSACQVVWYCGSNCQKL 58 (390)
Q Consensus 13 ~e~P~~~~~~~~~~~~~C~~C~~~~-----~--~~~C~~C~~~~yCS~~C~~~ 58 (390)
.-.+--+.+..-...+.|.+|-..+ . .+.|..|++. |-..|...
T Consensus 21 ~~~~H~F~~~~~~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~--~HkrC~~k 71 (84)
T 2row_A 21 CHKGHEFIPTLYHFPTNCEACMKPLWHMFKPPPALECRRCHIK--CHKDHMDK 71 (84)
T ss_dssp EETTEEEEEECCSSCEECSSSSSEECCSSSCCCEEEESSSCCE--EEHHHHHH
T ss_pred EcCCcceEeEcCCCCcchhhcCHhhhccccCCCCCEecCCCCc--cchhHhCC
Confidence 3344444555456789999997772 2 5679999975 88999873
No 138
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=25.99 E-value=1.4e+02 Score=23.66 Aligned_cols=43 Identities=14% Similarity=0.227 Sum_probs=32.3
Q ss_pred hhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhc
Q 016386 317 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 317 ~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
....|++++|++.|+++++. +|.+. .+...++.+|..+|....
T Consensus 117 ~~~~g~~~~A~~~~~~~l~~-----~p~~~---~~~~~lg~~~~~~g~~~~ 159 (184)
T 3vtx_A 117 YDSMGEHDKAIEAYEKTISI-----KPGFI---RAYQSIGLAYEGKGLRDE 159 (184)
T ss_dssp HHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCHHH
T ss_pred HHHhCCchhHHHHHHHHHHh-----cchhh---hHHHHHHHHHHHCCCHHH
Confidence 44578999999999888764 46554 466778889998888754
No 139
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=25.91 E-value=27 Score=23.27 Aligned_cols=27 Identities=26% Similarity=0.650 Sum_probs=19.0
Q ss_pred hhhccccCCCCCcceeeeCCCCCccccCcCCCc
Q 016386 262 ILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLV 294 (390)
Q Consensus 262 ~l~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~ 294 (390)
.+....|+ .|++. +....|.|.+||..
T Consensus 11 ~~~k~iCp--kC~a~----~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 11 IFKKYVCL--RCGAT----NPWGAKKCRKCGYK 37 (51)
T ss_dssp SSSEEECT--TTCCE----ECTTCSSCSSSSSC
T ss_pred HhCCccCC--CCCCc----CCCCceecCCCCCc
Confidence 34556786 68765 33467999999986
No 140
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=25.54 E-value=1.6e+02 Score=22.25 Aligned_cols=45 Identities=9% Similarity=-0.028 Sum_probs=30.9
Q ss_pred HhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhc
Q 016386 315 LALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 315 ~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
.-....|++++|++.++.++++ .|.+. .+...++.+|..+|....
T Consensus 55 ~~~~~~~~~~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~~~~~~~ 99 (126)
T 4gco_A 55 ACLTKLMEFQRALDDCDTCIRL-----DSKFI---KGYIRKAACLVAMREWSK 99 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCHHH
T ss_pred hHHHhhccHHHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHHCCCHHH
Confidence 3344567888888888887763 45543 456778888888887643
No 141
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=25.49 E-value=1.7e+02 Score=21.01 Aligned_cols=39 Identities=8% Similarity=0.120 Sum_probs=23.4
Q ss_pred hhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhc
Q 016386 317 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSS 363 (390)
Q Consensus 317 ~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~ 363 (390)
....+++++|++.++.++.. .|.+ ..+...+..+|..+|
T Consensus 94 ~~~~~~~~~A~~~~~~~~~~-----~p~~---~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 94 LEAMKDYTKAMDVYQKALDL-----DSSC---KEAADGYQRCMMAQY 132 (133)
T ss_dssp HHHTTCHHHHHHHHHHHHHH-----CGGG---THHHHHHHHHHHHHT
T ss_pred HHHHhhHHHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHHhc
Confidence 33456788888777776553 3433 235566666666554
No 142
>2yww_A Aspartate carbamoyltransferase regulatory chain; ATP complex, structural genomics, NPPSFA; HET: ATP; 2.00A {Methanocaldococcus jannaschii}
Probab=24.91 E-value=29 Score=28.63 Aligned_cols=33 Identities=12% Similarity=0.459 Sum_probs=19.4
Q ss_pred ccccCCCCC-c--cee-----eeCCCCCccccCcCCCccCH
Q 016386 265 GYRCKDDGC-S--GFL-----LRDSDDKGFTCQQCGLVRSK 297 (390)
Q Consensus 265 ~~~C~~~~C-~--g~~-----~~~~~~~~~~C~~C~~~~~~ 297 (390)
-++|+|++| . .++ +.+.+...++|..|++..+.
T Consensus 105 vl~C~Np~CITn~E~v~s~F~v~~~~~~~lrC~YCe~~~~~ 145 (149)
T 2yww_A 105 TLKCTNPNCITNKEKVRGKFKIESKNPLKIRCYYCEKFLNE 145 (149)
T ss_dssp SSCCSCTTSGGGTSCCCCEEEEEEETTEEEEETTTCCBCSS
T ss_pred eEEcCCCCCCcCCcccccEEEEEeCCCCEEEeeCCCcChhh
Confidence 467887777 2 121 21222345789999988653
No 143
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=24.85 E-value=1.5e+02 Score=26.03 Aligned_cols=47 Identities=11% Similarity=-0.108 Sum_probs=33.7
Q ss_pred hcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 318 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 318 ~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
...|++++|++.|.+++......- +......+...+..+|..+|+..
T Consensus 48 ~~~g~~~~A~~~~~~al~~~~~~~--~~~~~a~~~~~lg~~~~~~g~~~ 94 (292)
T 1qqe_A 48 RLRKELNLAGDSFLKAADYQKKAG--NEDEAGNTYVEAYKCFKSGGNSV 94 (292)
T ss_dssp HHTTCTHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHCCCHH
Confidence 357899999999998887765432 22345677778888888887763
No 144
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=24.81 E-value=2.2e+02 Score=22.53 Aligned_cols=50 Identities=12% Similarity=0.023 Sum_probs=36.9
Q ss_pred hhhcCCCHHHHHHHHHHHHHhhhcccCC-CchhHHHHHHHHHHHHHHhcchhc
Q 016386 316 ALTSCGNHQEVVSTYKMIEKLQKKLYHP-FSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 316 ~~~~~~~~~~a~~~~~~~~~~~~~~lhp-~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
-....|++++|++.+++.+..... .+ .......+...++.+|..+|+...
T Consensus 75 ~~~~~g~~~~A~~~~~~al~~~~~--~~~~~~~~~~~~~~lg~~~~~~g~~~~ 125 (203)
T 3gw4_A 75 VERMAGNWDAARRCFLEERELLAS--LPEDPLAASANAYEVATVALHFGDLAG 125 (203)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHH--cCccHHHHHHHHHHHHHHHHHhCCHHH
Confidence 344678999999999988776553 24 333667788888999988888743
No 145
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=24.81 E-value=1.5e+02 Score=25.96 Aligned_cols=40 Identities=10% Similarity=0.009 Sum_probs=20.1
Q ss_pred cCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 319 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 319 ~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
..|++++|+..++.++.. .|.+. .+...++.+|..+|...
T Consensus 49 ~~~~~~~A~~~~~~~~~~-----~~~~~---~~~~~l~~~~~~~~~~~ 88 (359)
T 3ieg_A 49 AMGKSKAALPDLTKVIAL-----KMDFT---AARLQRGHLLLKQGKLD 88 (359)
T ss_dssp HHTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHHTCHH
T ss_pred HccCHHHHHHHHHHHHHh-----CCCcc---hHHHHHHHHHHHcCChH
Confidence 344555555555555432 23332 34455556666655543
No 146
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=24.59 E-value=1.7e+02 Score=25.60 Aligned_cols=50 Identities=16% Similarity=0.055 Sum_probs=38.6
Q ss_pred hcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhcc
Q 016386 318 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCLG 368 (390)
Q Consensus 318 ~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~~ 368 (390)
...|++++|++.|+.++...... ...+.....+...++.+|..+|....+
T Consensus 166 ~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~nlg~~y~~~~~y~~A 215 (293)
T 3u3w_A 166 AENGYLKKGIDLFEQILKQLEAL-HDNEEFDVKVRYNHAKALYLDSRYEES 215 (293)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHhc-ccchhHHHHHHHHHHHHHHHHhHHHHH
Confidence 35789999999999988765443 235567788999999999999887543
No 147
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=24.49 E-value=56 Score=24.59 Aligned_cols=30 Identities=20% Similarity=0.449 Sum_probs=17.4
Q ss_pred ccccCCCCCcceeeeCCCCCccccCcCCCccC
Q 016386 265 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 296 (390)
Q Consensus 265 ~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~ 296 (390)
.+.|+ .|+..-+......-|.|..|+..+.
T Consensus 36 ky~Cp--fCgk~~vkR~a~GIW~C~~C~~~~A 65 (92)
T 3izc_m 36 RYDCS--FCGKKTVKRGAAGIWTCSCCKKTVA 65 (92)
T ss_dssp CCCCS--SSCSSCCEEEETTEEECTTTCCEEE
T ss_pred CCcCC--CCCCceeeecccceEEcCCCCCEEe
Confidence 45675 5643322222345799999987653
No 148
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=24.47 E-value=2e+02 Score=22.74 Aligned_cols=49 Identities=4% Similarity=-0.084 Sum_probs=37.1
Q ss_pred hhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 316 ALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 316 ~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
-....|++++|+..+++.+...... ........+...++.+|..+|+..
T Consensus 35 ~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~ 83 (203)
T 3gw4_A 35 VYAFMDRFDEARASFQALQQQAQKS--GDHTAEHRALHQVGMVERMAGNWD 83 (203)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHc--CCcHHHHHHHHHHHHHHHHcCCHH
Confidence 3445789999999999888766543 334566778888999999888874
No 149
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=24.36 E-value=2.8e+02 Score=22.60 Aligned_cols=49 Identities=4% Similarity=0.028 Sum_probs=39.0
Q ss_pred HHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhc
Q 016386 314 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 314 ~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
+...+..++|++|++.+..+++. .|.|..-..++..+-+.-.+-|++..
T Consensus 78 Av~~~kl~~Y~~A~~y~~~lL~i-----eP~n~QA~~Lk~~ie~~~~kdgl~G~ 126 (152)
T 1pc2_A 78 AVGNYRLKEYEKALKYVRGLLQT-----EPQNNQAKELERLIDKAMKKDGLVGM 126 (152)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHccCHHHHHHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHhhHHHH
Confidence 33445678999999999998874 49999999998888888877777644
No 150
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=24.34 E-value=1.9e+02 Score=20.32 Aligned_cols=40 Identities=18% Similarity=0.223 Sum_probs=22.5
Q ss_pred cCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 319 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 319 ~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
..+++++|+..++.++.. .|.+. .+...++.+|..+|...
T Consensus 55 ~~~~~~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~~~~~~ 94 (125)
T 1na0_A 55 KQGDYDEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYKQGDYD 94 (125)
T ss_dssp HTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCHH
T ss_pred HhCCHHHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHHhcCHH
Confidence 455677776666665543 23332 34456666666666553
No 151
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=24.21 E-value=44 Score=23.76 Aligned_cols=32 Identities=25% Similarity=0.680 Sum_probs=24.9
Q ss_pred CCCCcccccccCcC--CCCCCCCCCccccCCHHHHH
Q 016386 24 SSSISRCDGCFASS--NLKKCSACQVVWYCGSNCQK 57 (390)
Q Consensus 24 ~~~~~~C~~C~~~~--~~~~C~~C~~~~yCS~~C~~ 57 (390)
-...+.|.+|...+ ....|..|++. |-..|..
T Consensus 32 ~~~pt~C~~C~~~l~~qG~kC~~C~~~--cHkkC~~ 65 (72)
T 2fnf_X 32 RGGPGWCDLCGREVLRQALRCANCKFT--CHSECRS 65 (72)
T ss_dssp CSSCCBCTTTSSBCSSCCEECTTSSCE--ECTGGGG
T ss_pred CCCCcchhhhhHHHHhCcCccCCCCCe--echhhhc
Confidence 34678999998774 46789999974 8888864
No 152
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=24.12 E-value=43 Score=22.68 Aligned_cols=34 Identities=24% Similarity=0.608 Sum_probs=25.7
Q ss_pred cCCCCCcccccccCcC--CCCCCCCCCccccCCHHHHH
Q 016386 22 NNSSSISRCDGCFASS--NLKKCSACQVVWYCGSNCQK 57 (390)
Q Consensus 22 ~~~~~~~~C~~C~~~~--~~~~C~~C~~~~yCS~~C~~ 57 (390)
..-...+.|++|...+ ....|..|++. |-..|..
T Consensus 17 ~~~~~pt~C~~C~~~i~kqg~kC~~C~~~--cH~kC~~ 52 (59)
T 1rfh_A 17 ALRGGPGWCDLCGREVLRQALRCANCKFT--CHSECRS 52 (59)
T ss_dssp CCSSCCEECTTTCSEECSCCEECTTTSCE--ECHHHHT
T ss_pred eccCCCeEchhcchhhhhCccEeCCCCCe--Eehhhhh
Confidence 3344678999997763 46789999974 8888874
No 153
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=23.49 E-value=39 Score=21.72 Aligned_cols=32 Identities=25% Similarity=0.464 Sum_probs=24.5
Q ss_pred CCCcccccccCcC-----CCCCCCCCCccccCCHHHHHH
Q 016386 25 SSISRCDGCFASS-----NLKKCSACQVVWYCGSNCQKL 58 (390)
Q Consensus 25 ~~~~~C~~C~~~~-----~~~~C~~C~~~~yCS~~C~~~ 58 (390)
...+.|++|-..+ ....|..|+.. |-..|...
T Consensus 9 ~~pt~C~~C~~~l~g~~~qg~~C~~C~~~--~H~~C~~~ 45 (50)
T 1ptq_A 9 MSPTFCDHCGSLLWGLVKQGLKCEDCGMN--VHHKCREK 45 (50)
T ss_dssp SSCCBCTTTCCBCCSSSSCEEEETTTCCE--ECHHHHTT
T ss_pred CCCCCcCCCCceeeccCCccCEeCCCCCe--ECHHHhhh
Confidence 4678999998773 35789999974 88888753
No 154
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=22.90 E-value=41 Score=24.26 Aligned_cols=26 Identities=27% Similarity=0.640 Sum_probs=20.4
Q ss_pred CCcccccccCcC--CCCCCCCCCccccCCH
Q 016386 26 SISRCDGCFASS--NLKKCSACQVVWYCGS 53 (390)
Q Consensus 26 ~~~~C~~C~~~~--~~~~C~~C~~~~yCS~ 53 (390)
....|..|-+.. ..+.|. |+.. ||+.
T Consensus 24 ~~nRC~~CrKkvgL~gf~Cr-Cg~~-FCs~ 51 (74)
T 1wfl_A 24 KKNRCFMCRKKVGLTGFDCR-CGNL-FCGL 51 (74)
T ss_dssp CTTBCSSSCCBCGGGCEECT-TSCE-ECSS
T ss_pred cCCcChhhCCcccccCeecC-CCCE-echh
Confidence 356899999974 367899 9985 9983
No 155
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=22.79 E-value=1.9e+02 Score=21.94 Aligned_cols=21 Identities=5% Similarity=0.185 Sum_probs=10.6
Q ss_pred HhhhcCCCHHHHHHHHHHHHH
Q 016386 315 LALTSCGNHQEVVSTYKMIEK 335 (390)
Q Consensus 315 ~~~~~~~~~~~a~~~~~~~~~ 335 (390)
..+...|++++|+..|+.++.
T Consensus 26 ~~~~~~g~~~~A~~~~~~al~ 46 (142)
T 2xcb_A 26 FNQYQAGKWDDAQKIFQALCM 46 (142)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHccHHHHHHHHHHHHH
Confidence 333345555555555555443
No 156
>4fyy_B Aspartate carbamoyltransferase regulatory chain; pyrimidine nucleotide biosynthesis, feedback inhibition, all transferase; HET: UTP CTP; 1.94A {Escherichia coli} PDB: 1ezz_B 1f1b_B* 1i5o_B* 1q95_G* 1r0b_G* 1r0c_B* 1raa_B* 1rab_B* 1rac_B* 1rad_B* 1rae_B* 1raf_B* 1rag_B* 1rah_B* 1rai_B* 1sku_B 1tth_B* 1tu0_B 1tug_B* 1xjw_B* ...
Probab=22.79 E-value=46 Score=27.58 Aligned_cols=18 Identities=17% Similarity=0.336 Sum_probs=14.3
Q ss_pred CccccCcCCCccCHHHHH
Q 016386 284 KGFTCQQCGLVRSKEEIK 301 (390)
Q Consensus 284 ~~~~C~~C~~~~~~~~v~ 301 (390)
..++|..|.+..+.+++.
T Consensus 134 ~~~rC~YCe~~~~~~~i~ 151 (153)
T 4fyy_B 134 IALKCKYCEKEFSHNVVL 151 (153)
T ss_dssp EEEEETTTCCEEEHHHHH
T ss_pred CEEEeeCCCCEeccceec
Confidence 357999999998877653
No 157
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=22.46 E-value=2.4e+02 Score=26.91 Aligned_cols=62 Identities=16% Similarity=0.119 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhccc--C-----CCchhHHHHHHHHHHHHHHhcchhc
Q 016386 306 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLY--H-----PFSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~l--h-----p~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
.+......+..+...+++++|+..|++++....... . ..+.....+...++.+|..+|.+..
T Consensus 267 ~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~ 335 (457)
T 1kt0_A 267 QAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTK 335 (457)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 334455566667778999999999999887542110 0 0112346677788888888887743
No 158
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=22.44 E-value=2.1e+02 Score=24.90 Aligned_cols=51 Identities=14% Similarity=0.068 Sum_probs=36.2
Q ss_pred HHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhH-HHHHHHHHHHHHHhcchh
Q 016386 314 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNL-MQTREKLIKGYIHSSILC 366 (390)
Q Consensus 314 ~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~-~~~~~~l~~~y~~~~~~~ 366 (390)
+.-....+++++|+..|++++...... |.+... ..+...++.+|..+|...
T Consensus 162 g~~y~~~~~~~~A~~~~~kal~~~~~~--~~~~~~~~~~~~nlg~~y~~~~~y~ 213 (293)
T 2qfc_A 162 ANIYAENGYLKKGIDLFEQILKQLEAL--HDNEEFDVKVRYNHAKALYLDSRYE 213 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhc--CccccchHHHHHhHHHHHHHHhhHH
Confidence 333445789999999999988665432 333333 378889999999888874
No 159
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=22.43 E-value=1.7e+02 Score=24.13 Aligned_cols=51 Identities=6% Similarity=-0.021 Sum_probs=32.8
Q ss_pred HHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 307 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
++.....+......|++++|++.++.++... .+ ..+...++.+|..+|.+.
T Consensus 5 a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~------~~---~~~~~~~~~~~~~~~~~~ 55 (258)
T 3uq3_A 5 ADKEKAEGNKFYKARQFDEAIEHYNKAWELH------KD---ITYLNNRAAAEYEKGEYE 55 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------CC---THHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhh------cc---HHHHHHHHHHHHHcccHH
Confidence 3444555555666788889988888876654 11 235566677777777653
No 160
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=22.16 E-value=1.3e+02 Score=20.89 Aligned_cols=48 Identities=10% Similarity=-0.090 Sum_probs=32.8
Q ss_pred HHhhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHh-cchhc
Q 016386 314 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHS-SILCL 367 (390)
Q Consensus 314 ~~~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~-~~~~~ 367 (390)
+.-....+++++|++.++.++.. .|. .....+...++.+|..+ |....
T Consensus 47 a~~~~~~~~~~~A~~~~~~a~~~-----~~~-~~~~~~~~~l~~~~~~~~~~~~~ 95 (112)
T 2kck_A 47 GKALYNLERYEEAVDCYNYVINV-----IED-EYNKDVWAAKADALRYIEGKEVE 95 (112)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHT-----SCC-TTCHHHHHHHHHHHTTCSSCSHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHh-----Ccc-cchHHHHHHHHHHHHHHhCCHHH
Confidence 33344678999999999887764 344 11245677888888888 77643
No 161
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=21.91 E-value=1.6e+02 Score=22.83 Aligned_cols=43 Identities=16% Similarity=0.026 Sum_probs=28.8
Q ss_pred hhhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 316 ALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 316 ~~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
-....+++++|+..+..++.. .|.+ ..+...++.+|..+|.+.
T Consensus 72 ~~~~~~~~~~A~~~~~~al~~-----~p~~---~~a~~~~g~~~~~~g~~~ 114 (162)
T 3rkv_A 72 CYLNIGDLHEAEETSSEVLKR-----EETN---EKALFRRAKARIAAWKLD 114 (162)
T ss_dssp HHHHHTCHHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHHTTCHH
T ss_pred HHHhcCcHHHHHHHHHHHHhc-----CCcc---hHHHHHHHHHHHHHhcHH
Confidence 344567888888888777654 3544 346667777888777764
No 162
>1l1o_C Replication protein A 70 kDa DNA-binding subunit; eukaryotic SSB, ssDNA binding protein, OB-fold; 2.80A {Homo sapiens} SCOP: b.40.4.3
Probab=21.49 E-value=27 Score=29.65 Aligned_cols=27 Identities=15% Similarity=0.619 Sum_probs=11.5
Q ss_pred ccCCCCCcceeeeCCCCCccccCcCCCc
Q 016386 267 RCKDDGCSGFLLRDSDDKGFTCQQCGLV 294 (390)
Q Consensus 267 ~C~~~~C~g~~~~~~~~~~~~C~~C~~~ 294 (390)
.|++..|...+... ++..|.|.+|+..
T Consensus 45 aC~~~~CnKKv~~~-~~g~~~CekC~~~ 71 (181)
T 1l1o_C 45 ACPTQDCNKKVIDQ-QNGLYRCEKCDTE 71 (181)
T ss_dssp BCCSTTCCCBCEEE-TTTEEEETTTTEE
T ss_pred CCCchhcCCccccC-CCCeEECCCCCCc
Confidence 45433354443321 2234555555543
No 163
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.48 E-value=45 Score=23.55 Aligned_cols=26 Identities=35% Similarity=0.723 Sum_probs=20.9
Q ss_pred CCcccccccCcCCC-----CCCCCCCccccCCH
Q 016386 26 SISRCDGCFASSNL-----KKCSACQVVWYCGS 53 (390)
Q Consensus 26 ~~~~C~~C~~~~~~-----~~C~~C~~~~yCS~ 53 (390)
....|..|-+...+ +.| .|+.. ||+.
T Consensus 14 ~~~rC~~C~kk~gL~~~egf~C-rCg~~-FC~~ 44 (67)
T 1x4w_A 14 SRRRCFQCQTKLELVQQELGSC-RCGYV-FCML 44 (67)
T ss_dssp CTTBCSSSCCBCCHHHHHHHCC-SSSCC-CCTT
T ss_pred cCCcchhhCCeecccccCceEe-cCCCE-ehhc
Confidence 46789999999653 689 89995 9983
No 164
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=21.38 E-value=26 Score=24.16 Aligned_cols=28 Identities=32% Similarity=0.851 Sum_probs=21.6
Q ss_pred CcccccccCcCC---CCCCCCCCccccCCHHHH
Q 016386 27 ISRCDGCFASSN---LKKCSACQVVWYCGSNCQ 56 (390)
Q Consensus 27 ~~~C~~C~~~~~---~~~C~~C~~~~yCS~~C~ 56 (390)
...|.+|....+ ...|+.|+.. ||- +|-
T Consensus 15 ~~~C~~C~~~~~~~~~y~C~~C~~~-FC~-dCD 45 (59)
T 1z60_A 15 ERFCYGCQGELKDQHVYVCAVCQNV-FCV-DCD 45 (59)
T ss_dssp CCEETTTTEECTTSEEECCTTTTCC-BCH-HHH
T ss_pred CCcccccCcccCCCccEECCccCcC-ccc-chh
Confidence 357999998853 3789999996 994 674
No 165
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=21.25 E-value=2.1e+02 Score=26.02 Aligned_cols=45 Identities=13% Similarity=0.048 Sum_probs=21.6
Q ss_pred CCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchhc
Q 016386 320 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILCL 367 (390)
Q Consensus 320 ~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~~ 367 (390)
.|++++|++.++.++...... .++....+...|+.+|..+|....
T Consensus 235 ~~~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~la~~~~~~g~~~~ 279 (378)
T 3q15_A 235 SGDDQMAVEHFQKAAKVSREK---VPDLLPKVLFGLSWTLCKAGQTQK 279 (378)
T ss_dssp HTCHHHHHHHHHHHHHHHHHH---CGGGHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhh---CChhHHHHHHHHHHHHHHCCCHHH
Confidence 345555555555554443322 333335555555555555555443
No 166
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=20.53 E-value=57 Score=21.28 Aligned_cols=19 Identities=26% Similarity=0.774 Sum_probs=14.3
Q ss_pred ccccccCc--------CCCCCCCCCCc
Q 016386 29 RCDGCFAS--------SNLKKCSACQV 47 (390)
Q Consensus 29 ~C~~C~~~--------~~~~~C~~C~~ 47 (390)
.|..|.+. ++.++|+-|++
T Consensus 5 ~C~rCg~~fs~~el~~lP~IrCpyCGy 31 (48)
T 4ayb_P 5 RCGKCWKTFTDEQLKVLPGVRCPYCGY 31 (48)
T ss_dssp CCCCTTTTCCCCCSCCCSSSCCTTTCC
T ss_pred EeeccCCCccHHHHhhCCCcccCccCc
Confidence 47788776 24789999986
No 167
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=20.53 E-value=2.1e+02 Score=25.84 Aligned_cols=48 Identities=17% Similarity=0.027 Sum_probs=28.5
Q ss_pred hhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcchh
Q 016386 317 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSILC 366 (390)
Q Consensus 317 ~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~~ 366 (390)
....|++++|+..++.++...... ..+.....+...++.+|..+|...
T Consensus 273 ~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~ 320 (411)
T 4a1s_A 273 HIFLGQFEDAAEHYKRTLALAVEL--GEREVEAQSCYSLGNTYTLLHEFN 320 (411)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHCcCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHcCCHH
Confidence 334567777777776666554433 334455566666666666666654
No 168
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=20.33 E-value=2.4e+02 Score=24.79 Aligned_cols=43 Identities=7% Similarity=-0.032 Sum_probs=22.1
Q ss_pred CCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcch
Q 016386 321 GNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSIL 365 (390)
Q Consensus 321 ~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~ 365 (390)
+++++|+..|++++...... ........+...++.+|..+|..
T Consensus 129 g~~~~A~~~~~~Al~~~~~~--~~~~~~~~~~~~lg~~~~~~g~~ 171 (307)
T 2ifu_A 129 LDLSKAVHLYQQAAAVFENE--ERLRQAAELIGKASRLLVRQQKF 171 (307)
T ss_dssp TCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHHHHHHHHhC--CChhHHHHHHHHHHHHHHHcCCH
Confidence 56666666666655544321 11223345555556666555554
No 169
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=20.08 E-value=1.7e+02 Score=24.16 Aligned_cols=41 Identities=15% Similarity=0.040 Sum_probs=23.1
Q ss_pred hhcCCCHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHhcch
Q 016386 317 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKGYIHSSIL 365 (390)
Q Consensus 317 ~~~~~~~~~a~~~~~~~~~~~~~~lhp~~~~~~~~~~~l~~~y~~~~~~ 365 (390)
....|++++|+..|+.++.+ +|.+. .+...++.+|..+|..
T Consensus 64 ~~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~~g~~ 104 (208)
T 3urz_A 64 YKKNRNYDKAYLFYKELLQK-----APNNV---DCLEACAEMQVCRGQE 104 (208)
T ss_dssp HHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHHTCH
T ss_pred HHHCCCHHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHHcCCH
Confidence 33456777777777666553 34443 3445555666655554
Done!