Query 016389
Match_columns 390
No_of_seqs 329 out of 2051
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 06:25:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016389.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016389hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02192 3-ketoacyl-CoA syntha 100.0 3.5E-88 7.6E-93 697.6 33.8 370 19-388 10-379 (511)
2 PF08392 FAE1_CUT1_RppA: FAE1/ 100.0 1.8E-88 3.9E-93 652.6 26.7 287 103-389 1-287 (290)
3 PLN02854 3-ketoacyl-CoA syntha 100.0 2E-87 4.3E-92 693.4 34.0 386 1-388 1-391 (521)
4 PLN02377 3-ketoacyl-CoA syntha 100.0 3.1E-86 6.8E-91 684.0 35.9 371 17-387 4-374 (502)
5 PLN02932 3-ketoacyl-CoA syntha 100.0 7.4E-78 1.6E-82 618.5 35.8 344 45-388 2-351 (478)
6 PLN00415 3-ketoacyl-CoA syntha 100.0 3.5E-69 7.7E-74 549.4 34.6 306 84-389 33-338 (466)
7 PF00195 Chal_sti_synt_N: Chal 100.0 9.3E-41 2E-45 313.6 14.0 203 105-309 9-226 (226)
8 COG3424 BcsA Predicted naringe 100.0 1.5E-38 3.3E-43 304.3 20.8 250 111-370 2-260 (356)
9 PLN03172 chalcone synthase fam 100.0 8.1E-38 1.7E-42 317.2 25.5 255 109-370 15-286 (393)
10 PLN03173 chalcone synthase; Pr 100.0 3.2E-37 7E-42 312.7 24.7 255 109-370 15-286 (391)
11 PLN03168 chalcone synthase; Pr 100.0 5.2E-37 1.1E-41 311.1 25.8 253 109-370 14-285 (389)
12 PLN03171 chalcone synthase-lik 100.0 6.9E-36 1.5E-40 303.8 26.1 255 108-369 20-291 (399)
13 PLN03170 chalcone synthase; Pr 100.0 5.1E-36 1.1E-40 304.8 22.9 255 109-370 19-290 (401)
14 cd00831 CHS_like Chalcone and 100.0 2.4E-35 5.3E-40 295.3 23.8 255 110-370 1-268 (361)
15 PLN03169 chalcone synthase fam 100.0 5.8E-35 1.3E-39 296.3 26.5 258 106-370 17-290 (391)
16 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 4E-33 8.8E-38 274.6 17.5 190 109-338 2-192 (323)
17 PRK12880 3-oxoacyl-(acyl carri 100.0 1.2E-30 2.7E-35 261.4 19.8 175 107-309 4-179 (353)
18 PRK05963 3-oxoacyl-(acyl carri 100.0 1.3E-28 2.8E-33 243.0 20.1 168 110-310 3-171 (326)
19 PRK07204 3-oxoacyl-(acyl carri 100.0 2.7E-27 5.9E-32 233.8 22.7 170 109-310 3-174 (329)
20 PRK09258 3-oxoacyl-(acyl carri 100.0 1.8E-27 4E-32 235.7 20.7 194 107-322 2-207 (338)
21 cd00830 KAS_III Ketoacyl-acyl 99.9 1E-26 2.2E-31 227.7 20.5 169 110-310 1-170 (320)
22 PLN02326 3-oxoacyl-[acyl-carri 99.9 1.5E-26 3.2E-31 233.9 21.6 171 108-310 45-215 (379)
23 PRK12879 3-oxoacyl-(acyl carri 99.9 2.2E-26 4.7E-31 226.5 20.6 170 109-310 3-173 (325)
24 PRK07515 3-oxoacyl-(acyl carri 99.9 1.2E-25 2.5E-30 226.4 20.9 204 110-322 2-226 (372)
25 PRK06816 3-oxoacyl-(acyl carri 99.9 5.7E-26 1.2E-30 229.5 17.0 185 110-310 2-204 (378)
26 PRK06840 hypothetical protein; 99.9 1.2E-25 2.7E-30 223.0 18.9 173 108-310 2-177 (339)
27 CHL00203 fabH 3-oxoacyl-acyl-c 99.9 8.2E-26 1.8E-30 223.5 15.0 169 110-310 2-170 (326)
28 PRK04262 hypothetical protein; 99.9 9.9E-25 2.2E-29 217.9 20.0 166 110-309 2-168 (347)
29 TIGR00747 fabH 3-oxoacyl-(acyl 99.9 2E-24 4.3E-29 212.1 19.8 169 110-310 2-171 (318)
30 PRK09352 3-oxoacyl-(acyl carri 99.9 1.2E-23 2.6E-28 206.5 20.8 170 109-310 2-172 (319)
31 cd00827 init_cond_enzymes "ini 99.9 7.6E-24 1.7E-28 207.7 18.3 177 110-324 1-178 (324)
32 TIGR00748 HMG_CoA_syn_Arc hydr 99.9 5.5E-24 1.2E-28 212.7 14.1 165 111-309 2-167 (345)
33 PLN02577 hydroxymethylglutaryl 99.9 2.8E-22 6E-27 206.6 20.2 165 107-309 1-173 (459)
34 TIGR01835 HMG-CoA-S_prok 3-hyd 99.9 1.7E-22 3.7E-27 204.5 17.1 163 111-309 1-164 (379)
35 TIGR01833 HMG-CoA-S_euk 3-hydr 99.9 1.6E-21 3.5E-26 200.7 14.9 164 110-310 1-171 (454)
36 cd00327 cond_enzymes Condensin 99.7 8E-17 1.7E-21 152.2 15.5 108 184-310 6-114 (254)
37 COG3425 PksG 3-hydroxy-3-methy 99.7 4E-16 8.6E-21 155.6 17.8 166 110-309 2-168 (377)
38 PF01154 HMG_CoA_synt_N: Hydro 99.7 1.2E-16 2.5E-21 144.5 9.7 167 107-308 1-172 (174)
39 TIGR02845 spore_V_AD stage V s 99.7 1.7E-15 3.6E-20 148.9 17.3 117 184-310 49-173 (327)
40 cd00825 decarbox_cond_enzymes 99.6 5.5E-15 1.2E-19 145.2 13.3 123 185-310 11-173 (332)
41 PRK08304 stage V sporulation p 99.5 2.5E-13 5.5E-18 133.9 16.5 117 185-310 56-179 (337)
42 PRK06147 3-oxoacyl-(acyl carri 99.4 1.1E-12 2.5E-17 131.5 13.4 180 109-310 3-203 (348)
43 PF08545 ACP_syn_III: 3-Oxoacy 99.3 1.8E-12 3.9E-17 103.2 5.3 74 240-322 1-74 (80)
44 cd00834 KAS_I_II Beta-ketoacyl 99.3 3.8E-11 8.3E-16 121.5 13.6 185 109-310 1-243 (406)
45 cd00751 thiolase Thiolase are 99.2 5E-11 1.1E-15 121.1 9.6 96 183-279 20-116 (386)
46 PRK12404 stage V sporulation p 99.2 9.9E-10 2.2E-14 108.2 17.2 118 183-309 52-176 (334)
47 smart00825 PKS_KS Beta-ketoacy 99.1 4.3E-10 9.2E-15 114.9 12.7 125 183-310 85-247 (424)
48 TIGR01930 AcCoA-C-Actrans acet 99.1 2.6E-10 5.6E-15 116.0 9.9 96 183-279 19-115 (386)
49 PRK07108 acetyl-CoA acetyltran 99.1 3.6E-10 7.8E-15 115.3 10.1 96 183-279 25-122 (392)
50 PRK05656 acetyl-CoA acetyltran 99.1 5.3E-10 1.1E-14 114.1 10.1 96 183-279 24-120 (393)
51 cd00833 PKS polyketide synthas 99.0 5.7E-09 1.2E-13 106.1 16.0 121 184-310 86-247 (421)
52 PRK06205 acetyl-CoA acetyltran 99.0 1E-09 2.3E-14 112.3 10.1 96 183-279 24-120 (404)
53 PRK08235 acetyl-CoA acetyltran 99.0 1.2E-09 2.7E-14 111.4 10.4 96 183-279 24-120 (393)
54 PRK08242 acetyl-CoA acetyltran 99.0 1.8E-09 4E-14 110.4 10.9 96 184-280 27-124 (402)
55 PRK06059 lipid-transfer protei 99.0 1.6E-09 3.5E-14 110.6 10.1 93 185-279 23-117 (399)
56 PRK09051 beta-ketothiolase; Pr 99.0 1.5E-09 3.3E-14 110.8 9.9 96 183-279 25-122 (394)
57 PRK09052 acetyl-CoA acetyltran 99.0 2.5E-09 5.5E-14 109.3 10.7 95 184-279 30-127 (399)
58 PRK12578 acetyl-CoA acetyltran 99.0 2.5E-09 5.5E-14 108.6 9.7 94 184-279 20-114 (385)
59 PRK08170 acetyl-CoA acetyltran 98.9 4.4E-09 9.4E-14 108.5 10.7 95 184-279 26-121 (426)
60 PRK06501 3-oxoacyl-(acyl carri 98.9 7.6E-08 1.7E-12 99.2 19.6 182 110-310 12-257 (425)
61 PRK08313 acetyl-CoA acetyltran 98.9 3.8E-09 8.3E-14 107.5 9.3 91 184-278 23-117 (386)
62 cd00829 SCP-x_thiolase Thiolas 98.9 4.4E-09 9.6E-14 105.9 9.4 95 183-279 14-109 (375)
63 PRK05790 putative acyltransfer 98.9 8.2E-09 1.8E-13 105.2 9.9 95 183-278 24-119 (393)
64 PRK06954 acetyl-CoA acetyltran 98.8 1.2E-08 2.6E-13 104.4 10.1 94 184-278 30-124 (397)
65 cd00828 elong_cond_enzymes "el 98.8 4.3E-08 9.3E-13 99.7 14.2 122 183-310 70-243 (407)
66 cd00826 nondecarbox_cond_enzym 98.8 1.7E-08 3.7E-13 103.0 10.7 95 183-279 21-117 (393)
67 TIGR03150 fabF beta-ketoacyl-a 98.8 5E-08 1.1E-12 99.1 12.9 188 109-310 1-243 (407)
68 PRK07314 3-oxoacyl-(acyl carri 98.8 8.9E-08 1.9E-12 97.7 14.5 188 109-310 2-244 (411)
69 PRK06065 acetyl-CoA acetyltran 98.8 2.3E-08 5.1E-13 102.1 9.6 92 184-277 28-121 (392)
70 PRK06064 acetyl-CoA acetyltran 98.8 3.1E-08 6.7E-13 100.8 10.4 94 184-279 21-117 (389)
71 PF00108 Thiolase_N: Thiolase, 98.8 2.8E-08 6.2E-13 96.2 9.2 99 183-282 24-123 (264)
72 PRK07661 acetyl-CoA acetyltran 98.8 4.3E-08 9.4E-13 100.1 10.7 95 184-279 26-122 (391)
73 PRK07103 polyketide beta-ketoa 98.7 1.7E-07 3.6E-12 96.2 13.5 120 184-310 79-251 (410)
74 PRK08439 3-oxoacyl-(acyl carri 98.7 1.7E-07 3.6E-12 96.0 13.0 186 109-310 2-244 (406)
75 PRK07516 acetyl-CoA acetyltran 98.7 6.4E-08 1.4E-12 98.5 9.4 93 184-278 21-116 (389)
76 PRK06158 thiolase; Provisional 98.7 5.1E-08 1.1E-12 99.2 8.5 89 184-277 27-116 (384)
77 PRK06445 acetyl-CoA acetyltran 98.7 5.3E-08 1.2E-12 99.4 8.1 92 184-278 31-126 (394)
78 PLN02287 3-ketoacyl-CoA thiola 98.7 1E-07 2.2E-12 99.0 10.4 96 183-279 69-166 (452)
79 PRK13359 beta-ketoadipyl CoA t 98.7 1.3E-07 2.9E-12 96.8 10.8 96 184-280 25-123 (400)
80 PRK07851 acetyl-CoA acetyltran 98.6 1.3E-07 2.9E-12 96.9 10.6 95 184-280 26-123 (406)
81 PRK08963 fadI 3-ketoacyl-CoA t 98.6 1E-07 2.2E-12 98.5 9.6 95 184-279 28-123 (428)
82 PRK08722 3-oxoacyl-(acyl carri 98.6 7E-07 1.5E-11 91.9 15.4 184 109-310 4-246 (414)
83 PF00109 ketoacyl-synt: Beta-k 98.6 2.9E-07 6.4E-12 87.2 11.6 123 183-308 85-251 (254)
84 PRK09050 beta-ketoadipyl CoA t 98.6 2E-07 4.3E-12 95.5 10.2 96 184-280 25-123 (401)
85 PRK06289 acetyl-CoA acetyltran 98.6 1.5E-07 3.3E-12 96.3 9.4 91 184-278 25-121 (403)
86 PRK07850 acetyl-CoA acetyltran 98.6 2.5E-07 5.3E-12 94.4 10.5 95 184-279 25-121 (387)
87 PRK08131 acetyl-CoA acetyltran 98.6 2.8E-07 6.1E-12 94.5 10.8 96 184-280 25-122 (401)
88 PRK06633 acetyl-CoA acetyltran 98.6 1.7E-07 3.7E-12 95.7 9.1 95 184-279 26-121 (392)
89 PRK06366 acetyl-CoA acetyltran 98.6 2.7E-07 5.9E-12 94.1 10.4 95 184-279 25-120 (388)
90 TIGR02430 pcaF beta-ketoadipyl 98.5 4.1E-07 8.8E-12 93.3 10.3 96 184-280 24-122 (400)
91 KOG1393 Hydroxymethylglutaryl- 98.5 9.9E-07 2.1E-11 88.0 12.2 166 107-309 8-180 (462)
92 PRK08256 lipid-transfer protei 98.5 3.8E-07 8.2E-12 93.0 9.6 91 184-278 21-111 (391)
93 TIGR02446 FadI fatty oxidation 98.5 3.6E-07 7.8E-12 94.5 9.5 95 184-279 30-125 (430)
94 PLN02644 acetyl-CoA C-acetyltr 98.5 5.5E-07 1.2E-11 92.0 10.7 94 184-278 24-118 (394)
95 PRK06333 3-oxoacyl-(acyl carri 98.5 1.5E-06 3.3E-11 89.2 13.9 183 109-309 4-255 (424)
96 PRK06504 acetyl-CoA acetyltran 98.5 7.2E-07 1.6E-11 91.1 10.6 96 184-280 25-122 (390)
97 PRK06157 acetyl-CoA acetyltran 98.5 7.2E-07 1.6E-11 91.3 10.3 94 184-279 26-120 (398)
98 PRK08947 fadA 3-ketoacyl-CoA t 98.4 8.1E-07 1.8E-11 90.6 9.6 95 184-279 26-123 (387)
99 PRK09116 3-oxoacyl-(acyl carri 98.4 2.5E-06 5.5E-11 87.5 13.1 185 109-309 2-244 (405)
100 PTZ00455 3-ketoacyl-CoA thiola 98.4 1.5E-06 3.2E-11 90.2 10.8 95 184-279 47-152 (438)
101 PLN02836 3-oxoacyl-[acyl-carri 98.4 8.4E-06 1.8E-10 84.4 16.2 119 185-310 93-267 (437)
102 PRK06365 acetyl-CoA acetyltran 98.4 1.3E-06 2.9E-11 90.3 9.9 92 185-278 37-130 (430)
103 PRK06025 acetyl-CoA acetyltran 98.4 2.1E-06 4.5E-11 88.3 10.9 97 184-281 28-126 (417)
104 cd00832 CLF Chain-length facto 98.4 7.3E-06 1.6E-10 83.9 14.6 183 109-310 1-241 (399)
105 PLN02787 3-oxoacyl-[acyl-carri 98.4 7.6E-06 1.6E-10 86.9 15.2 184 109-310 129-373 (540)
106 TIGR02445 fadA fatty oxidation 98.4 1.2E-06 2.6E-11 89.4 8.8 95 184-279 24-121 (385)
107 PRK09185 3-oxoacyl-(acyl carri 98.4 8.4E-06 1.8E-10 83.2 14.9 81 221-308 137-233 (392)
108 PRK07967 3-oxoacyl-(acyl carri 98.4 5.6E-06 1.2E-10 85.0 13.5 186 109-310 2-244 (406)
109 PRK09268 acetyl-CoA acetyltran 98.3 2.7E-06 5.8E-11 88.0 10.4 95 184-279 30-125 (427)
110 PRK05952 3-oxoacyl-(acyl carri 98.3 6.4E-06 1.4E-10 83.9 12.8 170 109-310 2-222 (381)
111 PRK07801 acetyl-CoA acetyltran 98.3 2.5E-06 5.5E-11 86.7 9.7 94 184-278 25-120 (382)
112 PRK06519 3-oxoacyl-(acyl carri 98.2 3.6E-05 7.8E-10 78.9 14.7 186 108-310 5-255 (398)
113 PRK07910 3-oxoacyl-(acyl carri 98.2 9.7E-05 2.1E-09 76.2 17.7 191 109-310 12-254 (418)
114 PTZ00050 3-oxoacyl-acyl carrie 98.1 2E-05 4.3E-10 81.2 10.5 120 184-310 76-251 (421)
115 PRK08257 acetyl-CoA acetyltran 98.0 2.8E-05 6.1E-10 81.9 10.5 93 184-278 26-120 (498)
116 PRK08142 acetyl-CoA acetyltran 98.0 2.1E-05 4.5E-10 80.5 9.2 89 184-277 24-112 (388)
117 PRK06690 acetyl-CoA acetyltran 98.0 3.7E-05 7.9E-10 77.9 10.1 91 184-279 24-114 (361)
118 PRK14691 3-oxoacyl-(acyl carri 97.9 7.5E-05 1.6E-09 75.1 11.5 119 185-310 4-174 (342)
119 PRK07855 lipid-transfer protei 97.9 5.5E-05 1.2E-09 77.3 9.2 85 185-274 24-108 (386)
120 COG0304 FabB 3-oxoacyl-(acyl-c 97.7 0.0023 5E-08 66.0 17.5 124 181-311 67-245 (412)
121 PRK06066 acetyl-CoA acetyltran 97.7 0.00026 5.6E-09 72.4 10.5 90 184-278 24-116 (385)
122 TIGR02813 omega_3_PfaA polyket 97.6 0.0022 4.7E-08 78.9 18.0 191 108-309 6-282 (2582)
123 COG0183 PaaJ Acetyl-CoA acetyl 97.4 0.00071 1.5E-08 69.3 9.3 98 184-282 26-127 (392)
124 PF07451 SpoVAD: Stage V sporu 97.3 0.0031 6.8E-08 62.1 12.6 116 186-310 52-174 (329)
125 PRK07937 lipid-transfer protei 97.3 0.0012 2.6E-08 66.8 9.6 89 186-278 25-114 (352)
126 COG3321 Polyketide synthase mo 97.2 0.0059 1.3E-07 70.0 14.6 188 109-309 4-250 (1061)
127 KOG1390 Acetyl-CoA acetyltrans 96.9 0.0022 4.8E-08 63.4 7.0 98 183-281 28-126 (396)
128 KOG1406 Peroxisomal 3-ketoacyl 96.7 0.0021 4.5E-08 62.2 5.1 90 186-279 30-119 (408)
129 PF08541 ACP_syn_III_C: 3-Oxoa 96.3 0.0064 1.4E-07 48.8 4.5 75 197-275 1-78 (90)
130 PRK06816 3-oxoacyl-(acyl carri 95.5 0.078 1.7E-06 53.9 9.8 92 182-277 267-366 (378)
131 PRK06025 acetyl-CoA acetyltran 95.1 0.06 1.3E-06 55.8 7.3 91 190-307 318-416 (417)
132 TIGR00748 HMG_CoA_syn_Arc hydr 95.0 0.09 2E-06 52.8 8.1 82 186-273 207-293 (345)
133 PRK05963 3-oxoacyl-(acyl carri 94.8 0.083 1.8E-06 52.2 7.3 88 183-274 223-313 (326)
134 PRK09258 3-oxoacyl-(acyl carri 94.5 0.14 3E-06 50.8 8.0 92 181-276 233-327 (338)
135 KOG1391 Acetyl-CoA acetyltrans 94.5 0.068 1.5E-06 51.8 5.4 94 184-280 27-124 (396)
136 PRK09352 3-oxoacyl-(acyl carri 94.5 0.1 2.2E-06 51.2 7.0 88 183-274 215-305 (319)
137 PRK07204 3-oxoacyl-(acyl carri 94.1 0.14 2.9E-06 50.7 7.0 84 183-273 226-315 (329)
138 TIGR00747 fabH 3-oxoacyl-(acyl 93.9 0.19 4E-06 49.4 7.6 88 183-274 215-305 (318)
139 cd00830 KAS_III Ketoacyl-acyl 93.9 0.14 3.1E-06 50.0 6.6 88 183-274 219-309 (320)
140 cd00825 decarbox_cond_enzymes 93.8 0.23 4.9E-06 48.7 7.9 78 187-264 205-286 (332)
141 PRK12879 3-oxoacyl-(acyl carri 93.8 0.25 5.4E-06 48.6 8.2 84 184-274 222-311 (325)
142 PRK04262 hypothetical protein; 93.8 0.14 3E-06 51.4 6.4 81 187-273 209-294 (347)
143 PRK06840 hypothetical protein; 93.5 0.22 4.8E-06 49.5 7.3 81 186-274 236-322 (339)
144 PLN02326 3-oxoacyl-[acyl-carri 93.3 0.25 5.4E-06 50.3 7.4 88 183-274 276-366 (379)
145 KOG1389 3-oxoacyl CoA thiolase 93.3 0.21 4.5E-06 49.7 6.5 96 185-281 61-157 (435)
146 PRK08242 acetyl-CoA acetyltran 93.1 0.22 4.8E-06 51.4 6.8 91 190-307 303-401 (402)
147 PRK06366 acetyl-CoA acetyltran 93.1 0.22 4.7E-06 51.0 6.6 76 189-271 287-370 (388)
148 CHL00203 fabH 3-oxoacyl-acyl-c 92.9 0.28 6.1E-06 48.6 6.9 84 187-274 226-312 (326)
149 cd00327 cond_enzymes Condensin 92.8 0.4 8.8E-06 44.9 7.6 78 187-264 145-226 (254)
150 PRK07515 3-oxoacyl-(acyl carri 92.7 0.37 8.1E-06 48.7 7.6 86 183-274 267-358 (372)
151 PRK05656 acetyl-CoA acetyltran 92.6 0.43 9.3E-06 48.9 8.0 93 189-308 293-393 (393)
152 PRK07851 acetyl-CoA acetyltran 92.6 0.24 5.3E-06 51.0 6.2 92 189-307 305-404 (406)
153 PRK06445 acetyl-CoA acetyltran 92.5 0.37 7.9E-06 49.4 7.4 67 189-261 294-368 (394)
154 PRK13359 beta-ketoadipyl CoA t 92.4 0.28 6.2E-06 50.5 6.5 77 190-271 299-383 (400)
155 PRK09050 beta-ketoadipyl CoA t 92.4 0.29 6.3E-06 50.4 6.5 77 190-271 300-384 (401)
156 PRK06954 acetyl-CoA acetyltran 92.4 0.2 4.4E-06 51.4 5.4 67 190-262 298-372 (397)
157 PRK07850 acetyl-CoA acetyltran 92.3 0.43 9.3E-06 48.9 7.6 92 189-307 287-386 (387)
158 PLN02287 3-ketoacyl-CoA thiola 92.2 0.31 6.6E-06 51.1 6.5 96 189-310 333-437 (452)
159 PF02803 Thiolase_C: Thiolase, 92.1 0.33 7.2E-06 41.9 5.4 74 190-270 25-106 (123)
160 PRK07661 acetyl-CoA acetyltran 92.0 0.25 5.4E-06 50.7 5.5 70 188-263 290-367 (391)
161 KOG1394 3-oxoacyl-(acyl-carrie 91.7 1.7 3.8E-05 44.1 10.6 120 182-309 91-268 (440)
162 PRK06205 acetyl-CoA acetyltran 91.4 0.4 8.7E-06 49.3 6.2 93 190-307 301-402 (404)
163 TIGR02430 pcaF beta-ketoadipyl 91.3 0.49 1.1E-05 48.7 6.7 77 190-271 299-383 (400)
164 PRK09051 beta-ketothiolase; Pr 91.1 0.48 1E-05 48.7 6.4 67 190-262 295-369 (394)
165 PF02797 Chal_sti_synt_C: Chal 91.0 0.42 9.1E-06 42.7 5.2 30 341-370 20-49 (151)
166 PRK05790 putative acyltransfer 90.9 0.53 1.2E-05 48.1 6.5 75 190-271 294-376 (393)
167 PRK07801 acetyl-CoA acetyltran 90.7 0.55 1.2E-05 47.8 6.5 67 190-262 283-357 (382)
168 PRK08235 acetyl-CoA acetyltran 90.7 0.49 1.1E-05 48.6 6.1 68 189-262 293-368 (393)
169 TIGR02445 fadA fatty oxidation 90.6 1.2 2.6E-05 45.7 8.7 69 189-262 282-359 (385)
170 PRK09052 acetyl-CoA acetyltran 89.8 0.69 1.5E-05 47.6 6.3 69 188-262 298-374 (399)
171 KOG1392 Acetyl-CoA acetyltrans 89.8 0.29 6.3E-06 48.2 3.2 95 184-279 65-160 (465)
172 cd00751 thiolase Thiolase are 89.5 0.65 1.4E-05 47.3 5.8 42 190-235 288-329 (386)
173 PRK06690 acetyl-CoA acetyltran 89.1 1 2.2E-05 45.9 6.7 70 188-263 259-336 (361)
174 PRK06504 acetyl-CoA acetyltran 88.9 1.4 3E-05 45.2 7.7 69 188-262 289-365 (390)
175 PRK06147 3-oxoacyl-(acyl carri 88.7 0.82 1.8E-05 46.1 5.8 87 188-274 235-329 (348)
176 PRK08947 fadA 3-ketoacyl-CoA t 88.7 1.3 2.7E-05 45.5 7.3 69 190-262 285-362 (387)
177 cd00829 SCP-x_thiolase Thiolas 88.3 1.4 3.1E-05 44.3 7.2 46 187-236 251-296 (375)
178 cd00831 CHS_like Chalcone and 87.7 1.6 3.5E-05 43.8 7.2 88 183-274 255-350 (361)
179 COG0332 FabH 3-oxoacyl-[acyl-c 87.3 1.4 3E-05 44.3 6.3 87 182-273 218-308 (323)
180 COG3425 PksG 3-hydroxy-3-methy 87.2 2.2 4.7E-05 43.6 7.7 85 183-273 205-296 (377)
181 PRK06064 acetyl-CoA acetyltran 86.5 2.5 5.4E-05 43.1 7.8 71 189-263 260-354 (389)
182 cd00826 nondecarbox_cond_enzym 86.4 1.7 3.6E-05 44.7 6.5 71 189-263 271-365 (393)
183 PF13723 Ketoacyl-synt_2: Beta 86.4 17 0.00036 34.6 12.7 115 183-309 32-171 (218)
184 PRK07108 acetyl-CoA acetyltran 86.2 0.83 1.8E-05 46.9 4.2 68 189-262 292-367 (392)
185 PRK07516 acetyl-CoA acetyltran 85.7 1.9 4.1E-05 44.0 6.5 71 189-263 262-356 (389)
186 PRK06059 lipid-transfer protei 85.4 4.4 9.5E-05 41.5 9.0 69 190-262 276-368 (399)
187 PRK08257 acetyl-CoA acetyltran 84.8 2.5 5.3E-05 44.9 7.0 80 189-272 294-381 (498)
188 PRK08256 lipid-transfer protei 84.7 3 6.6E-05 42.6 7.4 70 189-262 266-359 (391)
189 cd00827 init_cond_enzymes "ini 84.6 3.1 6.7E-05 40.6 7.2 91 181-275 217-314 (324)
190 PLN02644 acetyl-CoA C-acetyltr 84.6 1.9 4.1E-05 44.3 5.9 66 191-262 295-368 (394)
191 TIGR01835 HMG-CoA-S_prok 3-hyd 84.3 2.5 5.5E-05 43.1 6.6 91 182-273 200-303 (379)
192 PRK12880 3-oxoacyl-(acyl carri 84.1 2.3 5E-05 43.0 6.2 71 183-257 238-312 (353)
193 TIGR02446 FadI fatty oxidation 83.9 3.9 8.4E-05 42.6 7.9 91 190-307 314-429 (430)
194 TIGR01930 AcCoA-C-Actrans acet 83.4 2.7 5.9E-05 42.9 6.5 49 190-244 289-337 (386)
195 PRK06633 acetyl-CoA acetyltran 83.2 1.9 4.2E-05 44.3 5.3 69 189-263 292-368 (392)
196 PLN03169 chalcone synthase fam 83.0 4.5 9.7E-05 41.5 7.9 89 183-273 277-374 (391)
197 PRK12578 acetyl-CoA acetyltran 81.7 3 6.6E-05 42.4 6.1 69 189-261 259-351 (385)
198 PRK08131 acetyl-CoA acetyltran 81.2 3 6.4E-05 43.0 5.8 71 189-263 298-376 (401)
199 PTZ00455 3-ketoacyl-CoA thiola 81.0 3.8 8.2E-05 42.8 6.6 70 189-262 311-404 (438)
200 PRK09268 acetyl-CoA acetyltran 79.9 6.1 0.00013 41.1 7.6 79 188-271 310-411 (427)
201 PRK08963 fadI 3-ketoacyl-CoA t 79.8 5.2 0.00011 41.5 7.1 25 189-213 311-335 (428)
202 PF02801 Ketoacyl-synt_C: Beta 79.1 0.47 1E-05 40.1 -0.7 76 189-264 27-110 (119)
203 PRK08170 acetyl-CoA acetyltran 77.9 7 0.00015 40.5 7.4 25 189-213 309-333 (426)
204 KOG2708 Predicted metalloprote 77.9 7.8 0.00017 37.3 6.9 92 186-283 50-142 (336)
205 PRK06289 acetyl-CoA acetyltran 77.3 9.3 0.0002 39.2 8.0 43 189-235 278-320 (403)
206 PRK06365 acetyl-CoA acetyltran 76.9 10 0.00022 39.4 8.3 70 188-261 294-389 (430)
207 PRK07937 lipid-transfer protei 76.2 8.7 0.00019 38.9 7.3 75 192-272 251-333 (352)
208 cd00834 KAS_I_II Beta-ketoacyl 73.0 5.5 0.00012 40.2 5.0 77 188-264 276-358 (406)
209 PRK08313 acetyl-CoA acetyltran 72.5 15 0.00032 37.6 8.0 70 188-261 256-350 (386)
210 cd00828 elong_cond_enzymes "el 71.9 6.4 0.00014 40.0 5.2 77 187-263 274-356 (407)
211 PRK06519 3-oxoacyl-(acyl carri 71.8 10 0.00022 39.1 6.7 74 189-264 282-357 (398)
212 COG0533 QRI7 Metal-dependent p 71.4 14 0.0003 37.4 7.2 93 181-280 47-141 (342)
213 PRK06157 acetyl-CoA acetyltran 71.3 19 0.00042 36.9 8.6 43 189-235 268-312 (398)
214 PRK07855 lipid-transfer protei 71.2 13 0.00027 38.2 7.1 41 190-234 269-309 (386)
215 PRK07314 3-oxoacyl-(acyl carri 70.0 6.8 0.00015 39.9 4.9 43 190-232 279-322 (411)
216 PRK06158 thiolase; Provisional 67.8 16 0.00035 37.3 7.1 42 189-234 256-297 (384)
217 PRK14691 3-oxoacyl-(acyl carri 67.6 12 0.00025 37.8 5.9 47 187-233 206-253 (342)
218 TIGR03150 fabF beta-ketoacyl-a 67.5 10 0.00022 38.4 5.5 45 189-233 277-322 (407)
219 cd00832 CLF Chain-length facto 67.2 9 0.0002 39.3 5.1 76 188-264 271-351 (399)
220 PLN02787 3-oxoacyl-[acyl-carri 67.0 12 0.00025 40.3 6.1 75 189-264 407-487 (540)
221 PRK09185 3-oxoacyl-(acyl carri 66.4 10 0.00022 38.7 5.3 74 190-264 263-340 (392)
222 PTZ00050 3-oxoacyl-acyl carrie 65.8 16 0.00035 37.6 6.7 77 188-264 284-368 (421)
223 COG0304 FabB 3-oxoacyl-(acyl-c 65.7 10 0.00022 39.4 5.1 69 189-257 278-353 (412)
224 PRK06066 acetyl-CoA acetyltran 65.6 16 0.00034 37.6 6.5 42 190-235 259-302 (385)
225 PRK06501 3-oxoacyl-(acyl carri 65.2 13 0.00028 38.5 5.8 44 189-232 291-335 (425)
226 COG1214 Inactive homolog of me 64.2 21 0.00046 33.7 6.6 88 186-283 38-126 (220)
227 PRK12404 stage V sporulation p 63.5 28 0.0006 35.2 7.5 91 188-280 207-314 (334)
228 PRK08142 acetyl-CoA acetyltran 63.5 23 0.0005 36.4 7.2 41 189-233 257-297 (388)
229 PRK09604 UGMP family protein; 62.8 27 0.00058 35.0 7.4 35 184-218 50-84 (332)
230 TIGR00329 gcp_kae1 metallohydr 61.2 28 0.00062 34.3 7.2 84 186-277 49-137 (305)
231 PRK05952 3-oxoacyl-(acyl carri 61.1 13 0.00027 38.1 4.8 77 188-264 255-334 (381)
232 KOG1794 N-Acetylglucosamine ki 61.1 65 0.0014 32.2 9.4 114 183-308 43-164 (336)
233 smart00825 PKS_KS Beta-ketoacy 60.9 21 0.00047 36.3 6.5 27 188-214 280-306 (424)
234 KOG1389 3-oxoacyl CoA thiolase 60.2 24 0.00052 35.5 6.3 76 191-272 324-407 (435)
235 PRK14878 UGMP family protein; 60.0 11 0.00024 37.6 4.2 37 181-218 41-77 (323)
236 PRK09605 bifunctional UGMP fam 58.4 22 0.00048 37.7 6.3 89 180-277 44-135 (535)
237 cd00833 PKS polyketide synthas 57.9 26 0.00056 35.5 6.5 28 187-214 279-306 (421)
238 PLN03170 chalcone synthase; Pr 57.7 25 0.00053 36.3 6.3 72 183-258 277-354 (401)
239 PLN03171 chalcone synthase-lik 57.6 37 0.00079 35.0 7.5 87 183-274 275-381 (399)
240 PRK09116 3-oxoacyl-(acyl carri 57.5 16 0.00034 37.6 4.9 44 189-232 277-321 (405)
241 PRK06333 3-oxoacyl-(acyl carri 55.6 18 0.00039 37.1 4.9 45 188-232 289-334 (424)
242 PRK08722 3-oxoacyl-(acyl carri 55.1 22 0.00047 36.7 5.4 44 189-232 280-324 (414)
243 TIGR03725 bact_YeaZ universal 54.8 13 0.00028 34.4 3.3 37 184-220 32-68 (202)
244 PRK07910 3-oxoacyl-(acyl carri 53.3 23 0.00049 36.7 5.2 45 189-233 288-333 (418)
245 TIGR03722 arch_KAE1 universal 52.9 15 0.00031 36.7 3.6 37 181-218 42-78 (322)
246 PLN03173 chalcone synthase; Pr 52.2 59 0.0013 33.4 8.0 72 183-258 273-350 (391)
247 PRK08304 stage V sporulation p 51.8 57 0.0012 33.0 7.5 91 188-280 209-316 (337)
248 TIGR03595 Obg_CgtA_exten Obg f 51.4 31 0.00067 26.6 4.5 36 125-160 11-46 (69)
249 PF09269 DUF1967: Domain of un 51.0 20 0.00043 27.7 3.3 36 125-160 11-46 (69)
250 PF07451 SpoVAD: Stage V sporu 48.2 23 0.00051 35.4 4.1 87 189-279 205-310 (329)
251 PLN02836 3-oxoacyl-[acyl-carri 48.1 33 0.00071 35.6 5.5 26 188-213 300-325 (437)
252 PF00814 Peptidase_M22: Glycop 48.0 13 0.00029 36.0 2.4 62 182-244 27-89 (268)
253 TIGR03723 bact_gcp putative gl 46.4 48 0.001 33.0 6.1 62 185-247 49-112 (314)
254 PLN03172 chalcone synthase fam 45.6 52 0.0011 33.9 6.4 71 184-258 274-350 (393)
255 CHL00094 dnaK heat shock prote 43.3 47 0.001 36.2 5.9 47 187-234 309-355 (621)
256 PTZ00340 O-sialoglycoprotein e 43.2 53 0.0011 33.4 5.9 86 186-278 50-137 (345)
257 TIGR02845 spore_V_AD stage V s 42.5 75 0.0016 32.1 6.7 91 188-280 203-309 (327)
258 KOG1406 Peroxisomal 3-ketoacyl 42.3 23 0.0005 34.9 3.0 30 184-213 269-298 (408)
259 KOG2707 Predicted metalloprote 40.5 73 0.0016 32.6 6.2 48 186-233 83-135 (405)
260 COG4126 Hydantoin racemase [Am 39.5 1.2E+02 0.0027 29.0 7.3 101 143-264 118-218 (230)
261 TIGR01796 CM_mono_aroH monofun 39.3 84 0.0018 27.0 5.6 52 191-246 24-78 (117)
262 PRK06065 acetyl-CoA acetyltran 38.1 1.7E+02 0.0038 30.0 8.9 24 190-213 265-290 (392)
263 PRK09585 anmK anhydro-N-acetyl 36.8 99 0.0021 31.7 6.7 85 180-266 64-158 (365)
264 PF08745 UPF0278: UPF0278 fami 36.5 12 0.00025 35.2 0.0 78 114-199 41-121 (205)
265 KOG1394 3-oxoacyl-(acyl-carrie 36.1 27 0.00059 35.8 2.5 31 188-218 302-333 (440)
266 PF07736 CM_1: Chorismate muta 35.5 1.1E+02 0.0023 26.5 5.6 54 187-244 20-76 (118)
267 PRK07103 polyketide beta-ketoa 35.3 65 0.0014 33.1 5.3 24 190-213 284-307 (410)
268 TIGR01743 purR_Bsub pur operon 34.7 4E+02 0.0086 26.2 10.3 49 100-163 10-58 (268)
269 PF06924 DUF1281: Protein of u 33.2 33 0.00071 30.1 2.2 37 128-164 72-108 (134)
270 KOG1391 Acetyl-CoA acetyltrans 32.8 55 0.0012 32.2 3.9 49 190-244 296-344 (396)
271 PRK05183 hscA chaperone protei 31.3 1.2E+02 0.0025 33.2 6.6 48 186-234 308-355 (616)
272 TIGR01991 HscA Fe-S protein as 31.1 1.1E+02 0.0024 33.2 6.4 51 183-234 289-339 (599)
273 PLN02854 3-ketoacyl-CoA syntha 31.1 1.7E+02 0.0036 31.6 7.5 42 189-234 387-434 (521)
274 PRK11867 2-oxoglutarate ferred 31.0 1.2E+02 0.0026 29.9 6.1 21 187-207 26-46 (286)
275 PRK13410 molecular chaperone D 30.6 1.6E+02 0.0035 32.5 7.6 51 183-234 305-355 (668)
276 COG1908 FrhD Coenzyme F420-red 28.5 1.1E+02 0.0024 26.6 4.6 70 211-285 4-73 (132)
277 cd02185 AroH Chorismate mutase 28.3 1.9E+02 0.004 24.9 5.9 53 191-246 24-78 (117)
278 PLN03168 chalcone synthase; Pr 27.9 2.3E+02 0.0049 29.1 7.7 70 184-257 273-348 (389)
279 COG1458 Predicted DNA-binding 27.7 23 0.00049 33.2 0.3 39 114-156 45-83 (221)
280 COG2377 Predicted molecular ch 27.4 1.3E+02 0.0028 31.0 5.6 93 178-274 64-170 (371)
281 TIGR02813 omega_3_PfaA polyket 27.1 97 0.0021 39.7 5.6 74 190-264 318-401 (2582)
282 TIGR02350 prok_dnaK chaperone 26.7 1.7E+02 0.0037 31.6 6.9 50 183-233 301-350 (595)
283 PTZ00186 heat shock 70 kDa pre 26.1 1.7E+02 0.0037 32.3 6.8 45 189-234 336-380 (657)
284 PRK13411 molecular chaperone D 25.7 1.4E+02 0.0031 32.8 6.1 46 187-233 308-353 (653)
285 TIGR01911 HesB_rel_seleno HesB 25.2 22 0.00048 28.9 -0.2 19 238-256 28-46 (92)
286 PTZ00400 DnaK-type molecular c 24.9 1.3E+02 0.0029 33.1 5.8 45 189-234 350-394 (663)
287 TIGR02435 CobG precorrin-3B sy 24.2 3.2E+02 0.0068 28.0 8.0 96 142-250 268-372 (390)
288 PLN03184 chloroplast Hsp70; Pr 23.6 2.5E+02 0.0054 31.1 7.5 50 184-234 343-392 (673)
289 PRK00290 dnaK molecular chaper 22.9 2.7E+02 0.0059 30.3 7.6 51 183-234 303-353 (627)
290 TIGR03285 methan_mark_14 putat 22.9 1.5E+02 0.0034 30.5 5.2 34 181-214 61-94 (445)
291 TIGR00035 asp_race aspartate r 22.1 4.5E+02 0.0098 24.5 8.1 114 145-282 14-134 (229)
292 KOG1390 Acetyl-CoA acetyltrans 22.0 1E+02 0.0022 31.3 3.7 68 191-264 298-373 (396)
293 TIGR03017 EpsF chain length de 22.0 4E+02 0.0087 27.3 8.4 38 193-231 116-153 (444)
294 cd01445 TST_Repeats Thiosulfat 21.5 1.5E+02 0.0033 25.5 4.4 46 193-241 83-130 (138)
295 TIGR02177 PorB_KorB 2-oxoacid: 21.2 3.3E+02 0.0072 26.9 7.1 20 188-207 11-30 (287)
296 PF00975 Thioesterase: Thioest 20.1 1.1E+02 0.0025 27.6 3.5 35 239-274 67-102 (229)
No 1
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=3.5e-88 Score=697.63 Aligned_cols=370 Identities=67% Similarity=1.115 Sum_probs=355.3
Q ss_pred cccccccCCCCCccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 016389 19 GVRIQHNRRLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILVF 98 (390)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (390)
...+++|++||||++|+|+||||+||||+++|+++++++|++++++.++.+++++|+..+|..+++++++++.+++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (511)
T PLN02192 10 LIEPSSSRKLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVVIAAQLSTFSIQDLHDLWEHLKFNLISVILCSTLLVF 89 (511)
T ss_pred ccccchhhhcchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34457899999999999999999999999999999999999988899999999999988998888888898888888889
Q ss_pred HHHHHHHcCCCCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcch
Q 016389 99 GLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSM 178 (390)
Q Consensus 99 ~~~~~~~~r~~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~ 178 (390)
++++|+++||++|||+||+||+|++++++|.+.|+|+....+.|++++++||+||++|||++++||+|++.++.||+.++
T Consensus 90 ~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~~~~~~ 169 (511)
T PLN02192 90 LSTLYFLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCM 169 (511)
T ss_pred HHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCCCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHH
Q 016389 179 AAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAK 258 (390)
Q Consensus 179 ~~~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~ 258 (390)
+++++|+++++++|+++||+++|++|+|||+||++||+++++||++++|+|+||+++++.+||++||||+||++||++|+
T Consensus 170 ~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~ 249 (511)
T PLN02192 170 AEARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAK 249 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccccccccceeEEeEEeecccCCCCcccccc
Q 016389 259 DLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVY 338 (390)
Q Consensus 259 ~lL~a~~~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~~~~~~~y~L~~~vrt~~g~dd~~~~~~~ 338 (390)
++++++++++|||||+|++|.+||.++||+++++||||||||||+||++++.+++++||+++|++|+|.++||++|+|++
T Consensus 250 ~lL~a~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v~ 329 (511)
T PLN02192 250 HLLQVHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVT 329 (511)
T ss_pred HHHHcCCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhcccee
Confidence 99999999999999999999999999999999999999999999999998766667899999999999999999999999
Q ss_pred ccccCCCceEEEEccchHHHHHHHHHHhHHHhCCCcCChhHHHHHHHHhc
Q 016389 339 QEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLG 388 (390)
Q Consensus 339 ~~ed~~g~~g~~Lsk~vp~va~~aL~~ni~~lgp~vlp~~e~~~~~~~~~ 388 (390)
|+||++|++|++|+|+||.+++++++.|+++++|+|||.+||++|++++.
T Consensus 330 ~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~ 379 (511)
T PLN02192 330 QEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLV 379 (511)
T ss_pred cccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEc
Confidence 99999999999999999999999999999999999999999999876543
No 2
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=100.00 E-value=1.8e-88 Score=652.55 Aligned_cols=287 Identities=68% Similarity=1.145 Sum_probs=283.7
Q ss_pred HHHcCCCCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHH
Q 016389 103 FIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAR 182 (390)
Q Consensus 103 ~~~~r~~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~ 182 (390)
|+++|+++|||+||+||+|++++++|.+.++|++...+.|++++++|++||+++|||+++||+|++.++.||+.++++++
T Consensus 1 y~~~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~~s~~~a~ 80 (290)
T PF08392_consen 1 YFMRRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPDPSLAAAR 80 (290)
T ss_pred CccCCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCcccHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHh
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
+|++.+++.|++++|+|+|++|+|||+||+|||+|+|+||+++||+|+||||+||++||++|||||||+++|++|+++|+
T Consensus 81 ~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~ 160 (290)
T PF08392_consen 81 EEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQ 160 (290)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccccccccceeEEeEEeecccCCCCcccccccccc
Q 016389 263 VNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQD 342 (390)
Q Consensus 263 a~~~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~~~~~~~y~L~~~vrt~~g~dd~~~~~~~~~ed 342 (390)
++|+++||||++|++|.+||.||+|+|+++||||||||||+||||++++++++||+|.|+||||.|++|++|+|++|+||
T Consensus 161 ~~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~eD 240 (290)
T PF08392_consen 161 AHPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEED 240 (290)
T ss_pred hCCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCceeeEEEeEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEccchHHHHHHHHHHhHHHhCCCcCChhHHHHHHHHhcc
Q 016389 343 DQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLGC 389 (390)
Q Consensus 343 ~~g~~g~~Lsk~vp~va~~aL~~ni~~lgp~vlp~~e~~~~~~~~~~ 389 (390)
++|..|++|+|+||.++|++||.||++|||+|||+|||++|++++++
T Consensus 241 ~~g~~Gv~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~~~~~~ 287 (290)
T PF08392_consen 241 EEGIVGVSLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFAASFIA 287 (290)
T ss_pred CCCceEEEEecchHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999875
No 3
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2e-87 Score=693.40 Aligned_cols=386 Identities=57% Similarity=0.973 Sum_probs=366.0
Q ss_pred CCCCCCCCCCCCCCCCCCcccccccCCCCCccccccchhhhhhhHHHHHHH---HHHHHHHHHHHHHHHhhccCHHHHHH
Q 016389 1 MEQSGPTYDSGSGGGAPVGVRIQHNRRLPDFLQSVNLKYVKLGYHYLISNL---LTLCFIPLIIITSIQVSEMNIDDLRQ 77 (390)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (390)
|+++++++|+... +...+.+++|++||||++|+|+||||+||||+++|+ ++++++|++++++.++.+++++|+..
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (521)
T PLN02854 1 MDKERLTAEMAFK--DSSSAVIKIRQRLPDFLQSVKLKYVKLGYGYSCNPATILFFLIILPLTIATLVQITGLEFDTVSE 78 (521)
T ss_pred CchhhhhHHHhcc--CCcceecchhhhCchHHHhhcceeeecchHHHHhhhHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 7888888888742 234777899999999999999999999999999999 66789999888899999999999988
Q ss_pred HHHH--hhhhhHHHHHHHHHHHHHHHHHHHcCCCCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHH
Q 016389 78 LWIH--LQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILE 155 (390)
Q Consensus 78 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~r~~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~ 155 (390)
+|.. +++++++++++++++++++++|+++||++|||+||+||+|++++++|.+.|+|+....+.|++++++||+||++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 158 (521)
T PLN02854 79 LWSNQALHLDTATRLTGSAFLLFLLGLYWAKRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRIST 158 (521)
T ss_pred HHHHhhhHHhHHHHHHHHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 9987 78889999999889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCceeeecCCCcCCCCCcchHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCC
Q 016389 156 RSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRG 235 (390)
Q Consensus 156 rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~ 235 (390)
|||++++||+|++.++.||+.+++++++|++++++.|+++||+++|++|+|||+||++||.++++||++++|+|+||+++
T Consensus 159 ~sg~g~~ty~P~~~~~~~~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~ 238 (521)
T PLN02854 159 RSGLGDETYLPRGITSRPPNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRT 238 (521)
T ss_pred hcCCCCccccCccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeeccccccccc
Q 016389 236 NIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQA 315 (390)
Q Consensus 236 ~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~~~~~~ 315 (390)
++.+||++||||+||++||++|+++++++++++|||||+|++|.+||.++||++++++|||||||||+||++++.++.++
T Consensus 239 ~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~ 318 (521)
T PLN02854 239 DIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRS 318 (521)
T ss_pred CceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEeccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976555678
Q ss_pred ceeEEeEEeecccCCCCccccccccccCCCceEEEEccchHHHHHHHHHHhHHHhCCCcCChhHHHHHHHHhc
Q 016389 316 KYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLG 388 (390)
Q Consensus 316 ~y~L~~~vrt~~g~dd~~~~~~~~~ed~~g~~g~~Lsk~vp~va~~aL~~ni~~lgp~vlp~~e~~~~~~~~~ 388 (390)
+|+|.|.+|+|.++|+.+|+|+.+++|++|.+++.++|++|.+++++++.||+++||+|+|++||++|+.+++
T Consensus 319 k~~L~~~v~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i 391 (521)
T PLN02854 319 KYQLVHTVRTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLV 391 (521)
T ss_pred chheeeEEEEEEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHH
Confidence 9999999999999999999999999998888999999999999999999999999999999999999988765
No 4
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=3.1e-86 Score=683.96 Aligned_cols=371 Identities=86% Similarity=1.342 Sum_probs=357.0
Q ss_pred CCcccccccCCCCCccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHhhhhhHHHHHHHHHH
Q 016389 17 PVGVRIQHNRRLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAIL 96 (390)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (390)
+-+++|++|++||||++|+|+||||+||||+++|+++++++|++++++.++.+++++|+..+|..+++++++++++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (502)
T PLN02377 4 GGEIRIHQTRMLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIIISIEASQMNPDDLRQLWIHLQYNLVSIIICSAFL 83 (502)
T ss_pred CceEEEeehhhCchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44899999999999999999999999999999999999999999888999999999999889988888888988888888
Q ss_pred HHHHHHHHHcCCCCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCc
Q 016389 97 VFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKP 176 (390)
Q Consensus 97 ~~~~~~~~~~r~~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~ 176 (390)
++++++|+++||++|||+||+||+|++++++|.+.|+|+....+.|++++++|++||+++|||++++|+|+..++.||+.
T Consensus 84 ~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~~~~ 163 (502)
T PLN02377 84 VFGLTVYIMTRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIPPRP 163 (502)
T ss_pred HHHHHHHHHcCCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccCchhccCCccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHH
Q 016389 177 SMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDL 256 (390)
Q Consensus 177 ~~~~~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~l 256 (390)
+|+.+++|+++++++|+++||+++|++|+|||+||++||.++++||++++|+|+|||++++.+||++||||+||++||++
T Consensus 164 ~~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~l 243 (502)
T PLN02377 164 SMAAAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDL 243 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccccccccceeEEeEEeecccCCCCcccc
Q 016389 257 AKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRC 336 (390)
Q Consensus 257 A~~lL~a~~~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~~~~~~~y~L~~~vrt~~g~dd~~~~~ 336 (390)
|+++++++++++|||||+|++|.+||++|+++++++||||||||||+||++++.++++++|++.|.+++|.++|+++|+|
T Consensus 244 A~~ll~~~~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~ 323 (502)
T PLN02377 244 AKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRC 323 (502)
T ss_pred HHHHHHcCCCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccce
Confidence 99999999999999999999999999999999999999999999999999977666678999999999999999999999
Q ss_pred ccccccCCCceEEEEccchHHHHHHHHHHhHHHhCCCcCChhHHHHHHHHh
Q 016389 337 VYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATL 387 (390)
Q Consensus 337 ~~~~ed~~g~~g~~Lsk~vp~va~~aL~~ni~~lgp~vlp~~e~~~~~~~~ 387 (390)
++|++|++|+.++.++|++|.+++++++.||+++||.|+|++||++|+++.
T Consensus 324 i~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~ 374 (502)
T PLN02377 324 VYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATL 374 (502)
T ss_pred eeeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998754
No 5
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=7.4e-78 Score=618.51 Aligned_cols=344 Identities=56% Similarity=0.963 Sum_probs=329.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHcCCCCeEEEEEeEEeCCCC
Q 016389 45 HYLISNLLTLCFIPLIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHN 124 (390)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~VyI~~~g~~~P~~~ 124 (390)
.|+++|+++++++|++++++.++.+++.+|+..+|..++.++++++.+++++++++++|+++||++|||+||+||+|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyl~d~~c~~p~~~ 81 (478)
T PLN02932 2 NYLMAHRFKLCFLPLMVGIAMEASRLSTQDLQNFYLYLQNNLTSLTMFFLYLALGSTLYLMTRPKPVYLVDFSCYLPPSH 81 (478)
T ss_pred hhHHHhHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeecCccc
Confidence 57899999999999998889999999999988899888888889888888888989999999999999999999999999
Q ss_pred CccCHHHHHHHHhhc---CCCCcch---HHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 016389 125 LKASYDKFMEHSKLT---GDFDESS---LEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFS 198 (390)
Q Consensus 125 ~~vs~~~~~e~~~~~---~~~~~~~---~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~la~~Aa~~aL~ 198 (390)
+++|.+.++|+.... +.|++++ ++||+||++||||++|+|+|++.++.|++.+++.+++|+++++++|+++||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~ 161 (478)
T PLN02932 82 LKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLPLQQNLAVSRKETEEVIIGAVDNLFR 161 (478)
T ss_pred ccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999766 7898888 9999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCC
Q 016389 199 NTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENIT 278 (390)
Q Consensus 199 kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S 278 (390)
++|++|+|||+||++||+++++||++++|+++|||++++.+||++||||+||++||++|+++++++++++|||||+|++|
T Consensus 162 ~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S 241 (478)
T PLN02932 162 NTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENIT 241 (478)
T ss_pred HcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCcccccccccccCCceEEEeecccccccccceeEEeEEeecccCCCCccccccccccCCCceEEEEccchHHH
Q 016389 279 QNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAI 358 (390)
Q Consensus 279 ~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~~~~~~~y~L~~~vrt~~g~dd~~~~~~~~~ed~~g~~g~~Lsk~vp~v 358 (390)
.+||+++++++++++|||||||||+||+++++++++++|+++|++|+|.|+||++|+|+.|++|++|.+|+.|+|++|.+
T Consensus 242 ~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp~~ 321 (478)
T PLN02932 242 QNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKNLPMV 321 (478)
T ss_pred cccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCccccceeecccCCcceeeECccchHH
Confidence 99999999999999999999999999999875556789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHhCCCcCChhHHHHHHHHhc
Q 016389 359 AGGALKTNITTLGPVVLPVSEQLLFFATLG 388 (390)
Q Consensus 359 a~~aL~~ni~~lgp~vlp~~e~~~~~~~~~ 388 (390)
++++++.||+++||+|+|++||++|+++++
T Consensus 322 ~~~al~~ni~~~~p~v~p~~e~~~~~~~~~ 351 (478)
T PLN02932 322 AARTLKINIATLGPLVLPLSEKFHFFVRFV 351 (478)
T ss_pred HHHHHhhhhhccccccccchhhhHHHHHHh
Confidence 999999999999999999999999988764
No 6
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=3.5e-69 Score=549.41 Aligned_cols=306 Identities=52% Similarity=0.902 Sum_probs=289.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHcCCCCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCcee
Q 016389 84 FNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEET 163 (390)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~r~~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~ 163 (390)
+.+..+-+.+.++++++++|+++||++||++||+||+|++++++|.+.++|+....+.|++++++||+||+++|||++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et 112 (466)
T PLN00415 33 FSPFPVKIGLLLISIFFYAYSTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDT 112 (466)
T ss_pred CChhHHHHHHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCe
Confidence 34444555566666677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCcCCCCCcchHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecC
Q 016389 164 YFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLG 243 (390)
Q Consensus 164 ~~p~~~~~~pp~~~~~~~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~ 243 (390)
|.|+..++.||.+++++.++|+++.+++|+++||+++|++|+|||+||++||.++++|+++++|+++||+++++.+||++
T Consensus 113 ~~p~~~~~~~~~~~~~~~~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~ 192 (466)
T PLN00415 113 YSPRCMLTSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLS 192 (466)
T ss_pred eeCCccccCCCCCChhhhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEec
Confidence 99999999999999999999999999999999999999999999999999888889999999999999999999999999
Q ss_pred CccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccccccccceeEEeEE
Q 016389 244 GMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIV 323 (390)
Q Consensus 244 gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~~~~~~~y~L~~~v 323 (390)
||||+||++||++|+++++++++++||||++|++|.++|.+++++++++|+||||||||+||++++.++.+++|+|+|++
T Consensus 193 gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v 272 (466)
T PLN00415 193 GMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIV 272 (466)
T ss_pred cccchHHHHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEE
Confidence 99999999999999999999999999999999999999878889999999999999999999998877677899999999
Q ss_pred eecccCCCCccccccccccCCCceEEEEccchHHHHHHHHHHhHHHhCCCcCChhHHHHHHHHhcc
Q 016389 324 RTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLGC 389 (390)
Q Consensus 324 rt~~g~dd~~~~~~~~~ed~~g~~g~~Lsk~vp~va~~aL~~ni~~lgp~vlp~~e~~~~~~~~~~ 389 (390)
|||.+++|++|+|++|++|++|.+++.|+|+||.+++++++.|+++|+|++||++||++|+++++.
T Consensus 273 rt~~~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~ 338 (466)
T PLN00415 273 RTHKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVK 338 (466)
T ss_pred EecCCCChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999987664
No 7
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=100.00 E-value=9.3e-41 Score=313.63 Aligned_cols=203 Identities=25% Similarity=0.361 Sum_probs=168.1
Q ss_pred HcCCCCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCc--chHHHHHHHHHHcCCCceeee-cCCC---------cCC
Q 016389 105 MTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDE--SSLEFQRKILERSGLGEETYF-PEAM---------HAI 172 (390)
Q Consensus 105 ~~r~~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~--~~~~~~~rI~~rsGI~~R~~~-p~~~---------~~~ 172 (390)
.+.+++.||+++|+..|+ ++++|+++.+++.+....+. +..+++++|++++||++||.+ |+.. ...
T Consensus 9 ~~~~g~A~Il~IgTA~P~--~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ 86 (226)
T PF00195_consen 9 QRSPGPAYILSIGTAVPP--HRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFAD 86 (226)
T ss_dssp HS-SSSEEEEEEEEE-SS--EEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSS
T ss_pred ccCCCCeEEEEEEEeCCC--ceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccC
Confidence 345789999999999999 88999999998654433333 456788999999999999976 3211 112
Q ss_pred CC-CcchHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHH
Q 016389 173 PP-KPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGV 251 (390)
Q Consensus 173 pp-~~~~~~~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl 251 (390)
|. +.||+.|.+++.+|+.+|++++|+++|++++||||||++|||+..+||++.+|+++|||+++++++.++||||+||+
T Consensus 87 ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~ 166 (226)
T PF00195_consen 87 PSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGA 166 (226)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHH
Confidence 22 66899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEEEeccCCcCcccC--CCcccccccccccCCceEEEeeccc
Q 016389 252 IAVDLAKDLLQVNWNTYAVVVSTENITQNWYFG--NKKSMLIPNCLFRVGCSAVLLSNKR 309 (390)
Q Consensus 252 ~aL~lA~~lL~a~~~~~aLVVstE~~S~~~~~~--~drs~lv~~~LFgDGAAAvLLs~~~ 309 (390)
.||++|+++.+++|+++|||||+|+||.+|+.. ++++++++++||||||||+||+.+|
T Consensus 167 ~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 167 AGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 999999999999999999999999999999853 3578999999999999999999875
No 8
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.5e-38 Score=304.27 Aligned_cols=250 Identities=22% Similarity=0.274 Sum_probs=213.1
Q ss_pred eEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHH-HcCCCceeeecCCCcCC-CC--CcchHHHHHHHH
Q 016389 111 VYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILE-RSGLGEETYFPEAMHAI-PP--KPSMAAAREEAE 186 (390)
Q Consensus 111 VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~-rsGI~~R~~~p~~~~~~-pp--~~~~~~~~eea~ 186 (390)
.+|.++++++|+ ++++|.++.+.+.... ..++.+.+.|.+. ..+|++|+++-+-.++. |+ ..+|+.|.|++.
T Consensus 2 a~i~sv~t~~Pp--y~~~Qse~~d~f~~~~--~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~ 77 (356)
T COG3424 2 AVIASVATALPP--YRYNQSEITDSFAELP--FQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAV 77 (356)
T ss_pred ceeeecccCCCc--cccchHHHHHHHHHhc--cccchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHH
Confidence 489999999999 8899988888777643 2334566677777 67788888875544554 43 778999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCC
Q 016389 187 QVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWN 266 (390)
Q Consensus 187 ~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~ 266 (390)
+++++|.++||++.++.|+|||+||++||++..+||++++|+++||++++++++.++||||+||..|+..|+++++++|.
T Consensus 78 ~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~ 157 (356)
T COG3424 78 PLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPD 157 (356)
T ss_pred HHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEeccCCcCcccCCC-cccccccccccCCceEEEeecccc--cccccceeEEeEEeecc--cCCCCccccccccc
Q 016389 267 TYAVVVSTENITQNWYFGNK-KSMLIPNCLFRVGCSAVLLSNKRK--DRRQAKYRLVHIVRTHK--GADDKAFRCVYQEQ 341 (390)
Q Consensus 267 ~~aLVVstE~~S~~~~~~~d-rs~lv~~~LFgDGAAAvLLs~~~~--~~~~~~y~L~~~vrt~~--g~dd~~~~~~~~~e 341 (390)
.+|||||.|+||+++...++ +++++...|||||+||++++.+.. +...-+..++.+..|.. +.|.|.| .
T Consensus 158 ~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~Mgw------d 231 (356)
T COG3424 158 ANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIMGW------D 231 (356)
T ss_pred ceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccccCCccccccce------e
Confidence 99999999999999998874 569999999999999999998764 22334566666655432 3344444 4
Q ss_pred cCCCceEEEEccchHHHHHHHHHHhHHHh
Q 016389 342 DDQGKTGVSLSKELMAIAGGALKTNITTL 370 (390)
Q Consensus 342 d~~g~~g~~Lsk~vp~va~~aL~~ni~~l 370 (390)
..+.|+.+.||+|+|.++...|+.|++++
T Consensus 232 v~d~G~~~vlSrdlp~lIe~~l~~~V~~f 260 (356)
T COG3424 232 VGDQGLKVVLSRDLPNLIESYLAPNVTTF 260 (356)
T ss_pred ecCCcEEEEEcCchhHHHHHHhhhhHHHH
Confidence 46889999999999999999999999876
No 9
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=8.1e-38 Score=317.23 Aligned_cols=255 Identities=15% Similarity=0.175 Sum_probs=204.4
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCC-CcchHH-HHHHHHHHcCCCceeeec-CC---Cc---C--C-C-CC
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDF-DESSLE-FQRKILERSGLGEETYFP-EA---MH---A--I-P-PK 175 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~-~~~~~~-~~~rI~~rsGI~~R~~~p-~~---~~---~--~-p-p~ 175 (390)
.+++|.++|++.|+ +.++|+++.+++.+.... +...++ .+++|++++||++||.+- ++ .+ . . | .+
T Consensus 15 ~~~~I~~igta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (393)
T PLN03172 15 GPATILAIGKATPA--NCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLD 92 (393)
T ss_pred CCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHH
Confidence 56899999999999 889999999988754211 112233 378899999999999752 11 11 1 1 2 27
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHH
Q 016389 176 PSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVD 255 (390)
Q Consensus 176 ~~~~~~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~ 255 (390)
++++.+.+++.+|+.+|+++||+++|++++|||+||++|++...+|+++.+|+++||+++++.++++.+|||+||++||+
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~ 172 (393)
T PLN03172 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLR 172 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHH
Confidence 79999999999999999999999999999999999988887767999999999999999988886666699999999999
Q ss_pred HHHHHHhcCCCCeEEEEEeccCCcCcc-cCC-CcccccccccccCCceEEEeecccccc-cccceeEEeEEeecc-cCCC
Q 016389 256 LAKDLLQVNWNTYAVVVSTENITQNWY-FGN-KKSMLIPNCLFRVGCSAVLLSNKRKDR-RQAKYRLVHIVRTHK-GADD 331 (390)
Q Consensus 256 lA~~lL~a~~~~~aLVVstE~~S~~~~-~~~-drs~lv~~~LFgDGAAAvLLs~~~~~~-~~~~y~L~~~vrt~~-g~dd 331 (390)
+|++++++++.++||||++|.+|.+++ +.+ +.+++++++||||||+|+||++++... .+++|+++.+.+++. ++++
T Consensus 173 ~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~~ 252 (393)
T PLN03172 173 LAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSDG 252 (393)
T ss_pred HHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCcc
Confidence 999999999999999999999998774 333 256678999999999999999865432 346789988755432 2322
Q ss_pred CccccccccccCCCceEEEEccchHHHHHHHHHHhHHHh
Q 016389 332 KAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTL 370 (390)
Q Consensus 332 ~~~~~~~~~ed~~g~~g~~Lsk~vp~va~~aL~~ni~~l 370 (390)
. + .+.-.++|+++.++|+||+.+.++++..++++
T Consensus 253 ~-~----~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~ 286 (393)
T PLN03172 253 A-I----DGHLREVGLTFHLLKDVPGLISKNIEKSLVEA 286 (393)
T ss_pred c-c----cceEEcCCcEEEEechHHHHHHHHHHHHHHHH
Confidence 2 1 11223467788999999999999999888664
No 10
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=3.2e-37 Score=312.67 Aligned_cols=255 Identities=16% Similarity=0.178 Sum_probs=203.9
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCC--CCcchHHHHHHHHHHcCCCceeee-cCCC---c---CC---C-CC
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGD--FDESSLEFQRKILERSGLGEETYF-PEAM---H---AI---P-PK 175 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~--~~~~~~~~~~rI~~rsGI~~R~~~-p~~~---~---~~---p-p~ 175 (390)
.+++|.++|+..|+ ++++|+++.+++.+... -..+..+++++|++++||++||.+ |+.. + .. | .+
T Consensus 15 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (391)
T PLN03173 15 GPATIMAIGTSTPP--NCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLD 92 (391)
T ss_pred CCeEEEEEEccCCC--cccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHH
Confidence 56899999999999 88999999999876431 112234457899999999999975 2221 1 11 2 27
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHH
Q 016389 176 PSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVD 255 (390)
Q Consensus 176 ~~~~~~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~ 255 (390)
++++.+.+++.+|+.+|+++||+++|++|+|||+||++|++....|+++.+|+++||+++++.++.+.+|||+||+.||+
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~ 172 (391)
T PLN03173 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLR 172 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHH
Confidence 78999999999999999999999999999999999999887766999999999999999888777666799999999999
Q ss_pred HHHHHHhcCCCCeEEEEEeccCCcCcc-cCC-CcccccccccccCCceEEEeecccccc-cccceeEEeEEeecc-cCCC
Q 016389 256 LAKDLLQVNWNTYAVVVSTENITQNWY-FGN-KKSMLIPNCLFRVGCSAVLLSNKRKDR-RQAKYRLVHIVRTHK-GADD 331 (390)
Q Consensus 256 lA~~lL~a~~~~~aLVVstE~~S~~~~-~~~-drs~lv~~~LFgDGAAAvLLs~~~~~~-~~~~y~L~~~vrt~~-g~dd 331 (390)
+|++++++++.++||||++|.+|.+|+ +.+ +.+++++++||||||+|+||++++... .+++|+++++.++.. ++++
T Consensus 173 ~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~~ 252 (391)
T PLN03173 173 LAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSDG 252 (391)
T ss_pred HHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCcc
Confidence 999999999999999999999998764 333 255678899999999999999865322 235788887654332 2322
Q ss_pred CccccccccccCCCceEEEEccchHHHHHHHHHHhHHHh
Q 016389 332 KAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTL 370 (390)
Q Consensus 332 ~~~~~~~~~ed~~g~~g~~Lsk~vp~va~~aL~~ni~~l 370 (390)
. +. +.-.++++++.+++++|+++.++++..++++
T Consensus 253 ~-~~----~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~ 286 (391)
T PLN03173 253 A-ID----GHLREVGLTFHLLKDVPGLISKNVEKSLTEA 286 (391)
T ss_pred c-ee----eEEEcCceEEEEecHHHHHHHHHHHHHHHHH
Confidence 2 21 1113467888999999999999999888765
No 11
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=5.2e-37 Score=311.08 Aligned_cols=253 Identities=14% Similarity=0.153 Sum_probs=200.2
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCC--CcchHHHHHHHHHHcCCCceeee-cCCCc---------CCC-CC
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDF--DESSLEFQRKILERSGLGEETYF-PEAMH---------AIP-PK 175 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~--~~~~~~~~~rI~~rsGI~~R~~~-p~~~~---------~~p-p~ 175 (390)
.+++|.++|+..|+ +.++|+++.+++.+...- ..+..+++++|++++||++||++ ++... ..| .+
T Consensus 14 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~ 91 (389)
T PLN03168 14 GPACVLGIGTAVPP--AEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLN 91 (389)
T ss_pred CCeEEEEEeccCCC--cccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHH
Confidence 57999999999999 889999999998764311 12234457889999999999974 22111 112 27
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCce-eEecCCccchhHHHHH
Q 016389 176 PSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIR-SYNLGGMGCSAGVIAV 254 (390)
Q Consensus 176 ~~~~~~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~-~~dl~gmGCsggl~aL 254 (390)
++++.+.+++.+|+.+|+++||+++|++|+|||+||++|++.+.+|+++++|+++||+++++. .+|++ +||+||++||
T Consensus 92 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~g~~~aL 170 (389)
T PLN03168 92 VRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQ-TGCFGGASVL 170 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeC-CccHHHHHHH
Confidence 799999999999999999999999999999999999998887779999999999999998875 56664 8999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccCCcCcccCC--CcccccccccccCCceEEEeecccccc-cccceeEEeEEeecc--cC
Q 016389 255 DLAKDLLQVNWNTYAVVVSTENITQNWYFGN--KKSMLIPNCLFRVGCSAVLLSNKRKDR-RQAKYRLVHIVRTHK--GA 329 (390)
Q Consensus 255 ~lA~~lL~a~~~~~aLVVstE~~S~~~~~~~--drs~lv~~~LFgDGAAAvLLs~~~~~~-~~~~y~L~~~vrt~~--g~ 329 (390)
++|++++++++.++|||||+|.+|.+++..+ +.+++++++||||||+|+||++++... .++.+++.....+.. +.
T Consensus 171 ~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~s~ 250 (389)
T PLN03168 171 RVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPESD 250 (389)
T ss_pred HHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEcCCC
Confidence 9999999999999999999999999886432 245567899999999999999865422 234456654433322 11
Q ss_pred CCCccccccccccCCCceEEEEccchHHHHHHHHHHhHHHh
Q 016389 330 DDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTL 370 (390)
Q Consensus 330 dd~~~~~~~~~ed~~g~~g~~Lsk~vp~va~~aL~~ni~~l 370 (390)
+.+.| .-++.++.+.+++++|+++.++++..++++
T Consensus 251 ~~~~~------~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~ 285 (389)
T PLN03168 251 GAIDG------HLTEAGLIFHLMKDVPGLISKNIEKFLNEA 285 (389)
T ss_pred CccCc------eEecCceEEEECHHHHHHHHHHHHHHHHHH
Confidence 22222 223556788899999999999999888765
No 12
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=6.9e-36 Score=303.79 Aligned_cols=255 Identities=17% Similarity=0.193 Sum_probs=198.4
Q ss_pred CCCeEEEEEeEEeCCCCCccCHHHHHHHHhhc---CCCCcchHHHHHHHHHHcCCCceeeecCCC----------cCCC-
Q 016389 108 PRPVYLVDYSCYKPPHNLKASYDKFMEHSKLT---GDFDESSLEFQRKILERSGLGEETYFPEAM----------HAIP- 173 (390)
Q Consensus 108 ~~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~---~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~----------~~~p- 173 (390)
..+++|.++|+|+|+ ++++|+++.+++... ..+ ++..+.++||++++||++||++.++. ...|
T Consensus 20 ~~~~~I~gigt~~P~--~~v~n~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~ 96 (399)
T PLN03171 20 DGLAAVLAIGTANPA--NCVPQDEFPDFYFRATKSDHL-TALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPS 96 (399)
T ss_pred CCCcEEEEEEeeCCC--cccCHHHHHHHHHHHhccccc-HHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCC
Confidence 367999999999999 889999999986432 111 11233467999999999999985431 1112
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHH
Q 016389 174 PKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIA 253 (390)
Q Consensus 174 p~~~~~~~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~a 253 (390)
++.|++.|.|.+.+|+++|++++|+++|++|+|||+||++|++....|+++.+|+++||+++++.+....++||+|+++|
T Consensus 97 ~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~a 176 (399)
T PLN03171 97 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAA 176 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccCCccHHHHHH
Confidence 37899999999999999999999999999999999999998876669999999999999998765333345799999999
Q ss_pred HHHHHHHHhcCCCCeEEEEEeccCCcCcccCCC--cccccccccccCCceEEEeecccccccccceeEEeEEeecccCCC
Q 016389 254 VDLAKDLLQVNWNTYAVVVSTENITQNWYFGNK--KSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADD 331 (390)
Q Consensus 254 L~lA~~lL~a~~~~~aLVVstE~~S~~~~~~~d--rs~lv~~~LFgDGAAAvLLs~~~~~~~~~~y~L~~~vrt~~g~dd 331 (390)
|++|.+++++++.++||||++|.+|..+++.++ .+.++.++||||||+|+||+++++...+..|++........+
T Consensus 177 L~~A~~li~~~~~~~vLVv~~e~~s~~~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~~~p--- 253 (399)
T PLN03171 177 LRLAKDLAENNRGARVLVVAAEITLLLFNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQAIIP--- 253 (399)
T ss_pred HHHHHHHHHhCCCCeEEEEEEeccccccCCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeEEec---
Confidence 999999999999999999999999999876542 245667899999999999998764333345778765433322
Q ss_pred CccccccccccCCCceEEEEc-cchHHHHHHHHHHhHHH
Q 016389 332 KAFRCVYQEQDDQGKTGVSLS-KELMAIAGGALKTNITT 369 (390)
Q Consensus 332 ~~~~~~~~~ed~~g~~g~~Ls-k~vp~va~~aL~~ni~~ 369 (390)
..++. +..+..++++...++ +++|+.++++++..++.
T Consensus 254 ~~~~~-~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~ 291 (399)
T PLN03171 254 ESDDA-INMHFTEGGLDGNIGTRQVPGLIGDNIERCLLD 291 (399)
T ss_pred CCchh-eEEEEEcCCceEEECchhHHHHHHHHHHHHHHH
Confidence 11111 222223466666777 99999998888887764
No 13
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=5.1e-36 Score=304.85 Aligned_cols=255 Identities=15% Similarity=0.156 Sum_probs=199.0
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCC-C-cchHHHHHHHHHHcCCCceeeec-CC---Cc---C---CC-CC
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDF-D-ESSLEFQRKILERSGLGEETYFP-EA---MH---A---IP-PK 175 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~-~-~~~~~~~~rI~~rsGI~~R~~~p-~~---~~---~---~p-p~ 175 (390)
.+.+|.++|+..|+ +.++|+++.+++.+.... + .+..+++++|++++||++||.+- ++ .+ . .| .+
T Consensus 19 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 96 (401)
T PLN03170 19 GPATVLAIGTATPA--NCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLD 96 (401)
T ss_pred CCeEEEEEeecCCC--ccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHH
Confidence 46899999999999 889999999998874311 1 22333478999999999999752 11 11 1 12 27
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCce-eEecCCccchhHHHHH
Q 016389 176 PSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIR-SYNLGGMGCSAGVIAV 254 (390)
Q Consensus 176 ~~~~~~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~-~~dl~gmGCsggl~aL 254 (390)
++++.+.+++.+|+.+|+++||+++|++++|||+||++|+++..+|+++++|+++||+++++. .++++ +||+||+.||
T Consensus 97 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~G~~~aL 175 (401)
T PLN03170 97 ARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQ-QGCFAGGTVL 175 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhc-ChhHHHHHHH
Confidence 789999999999999999999999999999999999988877679999999999999998875 56765 8999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccCCcCcc-cCCC-cccccccccccCCceEEEeecccccc-cccceeEEeEEeecccCCC
Q 016389 255 DLAKDLLQVNWNTYAVVVSTENITQNWY-FGNK-KSMLIPNCLFRVGCSAVLLSNKRKDR-RQAKYRLVHIVRTHKGADD 331 (390)
Q Consensus 255 ~lA~~lL~a~~~~~aLVVstE~~S~~~~-~~~d-rs~lv~~~LFgDGAAAvLLs~~~~~~-~~~~y~L~~~vrt~~g~dd 331 (390)
++|++++++++.++||||++|++|.+++ +.++ .+..++++||||||+|+||++++... ..+.|++........ ++.
T Consensus 176 ~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~~~~-p~~ 254 (401)
T PLN03170 176 RVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTIL-PDS 254 (401)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccceEe-cCC
Confidence 9999999999999999999999999984 4432 34667889999999999999875421 224567765422211 222
Q ss_pred CccccccccccCCCceEEEEccchHHHHHHHHHHhHHHh
Q 016389 332 KAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTL 370 (390)
Q Consensus 332 ~~~~~~~~~ed~~g~~g~~Lsk~vp~va~~aL~~ni~~l 370 (390)
+.+ +.+.-.+.++.+.++|+||+.+.+.+...++++
T Consensus 255 ~~~---~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~ 290 (401)
T PLN03170 255 EGA---IDGHLREVGLTFHLLKDVPGLISKNIERSLEEA 290 (401)
T ss_pred ccc---ccceEEcCCeEEEEehHHHHHHHHHHHHHHHHH
Confidence 111 111123456788889999999999998888664
No 14
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=2.4e-35 Score=295.25 Aligned_cols=255 Identities=30% Similarity=0.400 Sum_probs=202.2
Q ss_pred CeEEEEEeEEeCCCCCccCHHHHHHHHhhcCC--CCcchHHHHHHHHHHcCCCceeeecC--CCcC-------CCCCcch
Q 016389 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGD--FDESSLEFQRKILERSGLGEETYFPE--AMHA-------IPPKPSM 178 (390)
Q Consensus 110 ~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~--~~~~~~~~~~rI~~rsGI~~R~~~p~--~~~~-------~pp~~~~ 178 (390)
.+||.++++|+|+ +.++|+++.+++..... +.+...++.+||++++||++||++.+ ...+ .+.+.++
T Consensus 1 ~~~I~~~~~~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (361)
T cd00831 1 AATILAIGTAVPP--HRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERN 78 (361)
T ss_pred CcEEEEEEEeCCC--CcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcch
Confidence 3799999999999 77999999998874321 11235666789999999999999854 2211 1247899
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHH
Q 016389 179 AAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAK 258 (390)
Q Consensus 179 ~~~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~ 258 (390)
+.+.+++.+|+.+|++++|+++|++|+|||+||++|++++..|+++.+|+++||+++++.+||++++||+|++.||++|+
T Consensus 79 ~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~ 158 (361)
T cd00831 79 DIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAK 158 (361)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHH
Confidence 99999999999999999999999999999999999988899999999999999999889999999889999999999999
Q ss_pred HHHhcCCCCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccccc--cccceeEEeEEeecccCCCCcccc
Q 016389 259 DLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDR--RQAKYRLVHIVRTHKGADDKAFRC 336 (390)
Q Consensus 259 ~lL~a~~~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~~~--~~~~y~L~~~vrt~~g~dd~~~~~ 336 (390)
+++++++.++||||++|.+|..+++.+++++.+++++|||||+|+||++++... ....+++.++..... ++... .
T Consensus 159 ~~~~~~~~~~aLvv~~e~~s~~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~--~ 235 (361)
T cd00831 159 DLLEANPGARVLVVSTELCSLWYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLL-PDSED--A 235 (361)
T ss_pred HHHHHCCCCEEEEEEeecccceeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceee-ecCCC--c
Confidence 999999999999999999999666553367777889999999999999876532 124566665432222 11110 0
Q ss_pred ccccccCCCceEEEEccchHHHHHHHHHHhHHHh
Q 016389 337 VYQEQDDQGKTGVSLSKELMAIAGGALKTNITTL 370 (390)
Q Consensus 337 ~~~~ed~~g~~g~~Lsk~vp~va~~aL~~ni~~l 370 (390)
+.....++++.+.++++++..+.+.+...++.+
T Consensus 236 -~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~ 268 (361)
T cd00831 236 -MGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKL 268 (361)
T ss_pred -eEEEEEcceEEEEeChhHHHHHHHHHHHHHHHH
Confidence 111123456778889999998888777777554
No 15
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=5.8e-35 Score=296.32 Aligned_cols=258 Identities=15% Similarity=0.145 Sum_probs=197.7
Q ss_pred cCCCCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcc-hHHHHHHHHHHcCCCceeeecCCC-------cC---CC-
Q 016389 106 TRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDES-SLEFQRKILERSGLGEETYFPEAM-------HA---IP- 173 (390)
Q Consensus 106 ~r~~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~-~~~~~~rI~~rsGI~~R~~~p~~~-------~~---~p- 173 (390)
..|.+++|.++|+++|+ +.++|+++.+++.....-+++ ..+.++||++++||++||++.+.. +. .|
T Consensus 17 ~~~~~~~I~gigt~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~ 94 (391)
T PLN03169 17 ANPGKATILALGKAFPS--QLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPT 94 (391)
T ss_pred CCCCCeEEEEEEeeCCC--eecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCC
Confidence 45788999999999999 889999999865542111222 234468899999999999874210 01 12
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCce-eEecCCccchhHHH
Q 016389 174 PKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIR-SYNLGGMGCSAGVI 252 (390)
Q Consensus 174 p~~~~~~~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~-~~dl~gmGCsggl~ 252 (390)
++.|++.+.|.+.+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++++. .+|++ +||+|+++
T Consensus 95 ~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~-~gC~g~~~ 173 (391)
T PLN03169 95 IKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYF-LGCSGGVA 173 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeeccc-ChhHHHHH
Confidence 36788889999999999999999999999999999999999899999999999999999998875 68886 79999999
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccCCcCcccCC--CcccccccccccCCceEEEeecccccc-cccceeEEeEEeecccC
Q 016389 253 AVDLAKDLLQVNWNTYAVVVSTENITQNWYFGN--KKSMLIPNCLFRVGCSAVLLSNKRKDR-RQAKYRLVHIVRTHKGA 329 (390)
Q Consensus 253 aL~lA~~lL~a~~~~~aLVVstE~~S~~~~~~~--drs~lv~~~LFgDGAAAvLLs~~~~~~-~~~~y~L~~~vrt~~g~ 329 (390)
||++|.+++++++.++||||++|.+|.+++..+ +....++++||||||+|+||++++... ....|++........ +
T Consensus 174 aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~i-p 252 (391)
T PLN03169 174 GLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQFL-P 252 (391)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeEc-C
Confidence 999999999999999999999999999887432 133456789999999999999865421 123455543322211 1
Q ss_pred CCCccccccccccCCCceEEEEccchHHHHHHHHHHhHHHh
Q 016389 330 DDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTL 370 (390)
Q Consensus 330 dd~~~~~~~~~ed~~g~~g~~Lsk~vp~va~~aL~~ni~~l 370 (390)
++.. . +.+...+.++.+.++++||+.+.++++..++++
T Consensus 253 ~~~~--~-~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~ 290 (391)
T PLN03169 253 GTEK--T-IDGRLTEEGINFKLGRELPQKIEDNIEGFCKKL 290 (391)
T ss_pred CCcc--c-cCceecCCceEEEECcHHHHHHHHHHHHHHHHH
Confidence 1111 1 111123456778899999999999888777544
No 16
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=4e-33 Score=274.60 Aligned_cols=190 Identities=19% Similarity=0.334 Sum_probs=162.7
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHHH
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQV 188 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~l 188 (390)
..++|.++|+|+|+ +.++|+++.+....+ + +||..++||++||+..++ |...+|
T Consensus 2 ~~a~i~g~G~~lP~--~~vtn~d~e~~~~ts----d------ewI~~rtGir~R~~a~~~--------------e~~s~l 55 (323)
T COG0332 2 MNAKILGIGSYLPE--RVVTNADLEKRVDTS----D------EWIETRTGIRERRIAADD--------------ETTSDL 55 (323)
T ss_pred CcceEEEEEeecCC--cccChHHHHhccCCC----c------ceeeeecCCceeeecCCC--------------ccHHHH
Confidence 46899999999999 789999998655432 2 489999999999998766 788999
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCC
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNT 267 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~ 267 (390)
+++|+++||+++|++|+|||+||++|++ +++.|+++++||++||+.. +.+||++ .+|+|+++||++|.++++++..+
T Consensus 56 a~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~~-~~afDl~-aaCsgf~yaL~~A~~~i~sG~~k 133 (323)
T COG0332 56 AVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGG-APAFDLQ-AACSGFLYALSVADGLIRSGGYK 133 (323)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCCC-cceeech-hhhHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999854 7889999999999999985 9999998 69999999999999999999999
Q ss_pred eEEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccccccccceeEEeEEeecccCCCCcccccc
Q 016389 268 YAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVY 338 (390)
Q Consensus 268 ~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~~~~~~~y~L~~~vrt~~g~dd~~~~~~~ 338 (390)
+||||++|.+|...++.+ |. +..||||||+|+||++.+.+ ..++ .++.++|...+++++
T Consensus 134 ~vLVVg~e~~S~~ld~~d-R~---t~vlFgDGAgAvvl~~~~~~-----~~i~---~~~l~sdg~~~~~l~ 192 (323)
T COG0332 134 NVLVVGAETLSRILDWTD-RD---TCVLFGDGAGAVVLEATEDD-----NGIL---DTDLGSDGSQGDLLY 192 (323)
T ss_pred EEEEEehhHhhccCCHhh-cc---ceEEEcCCceEEEEecCCCC-----cCee---eeeeeccccCCCeee
Confidence 999999999999999874 64 48999999999999998722 2222 234555666555544
No 17
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.97 E-value=1.2e-30 Score=261.39 Aligned_cols=175 Identities=16% Similarity=0.199 Sum_probs=151.7
Q ss_pred CCCCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHH
Q 016389 107 RPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAE 186 (390)
Q Consensus 107 r~~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~ 186 (390)
|.++++|.++|+|+|+ ++++|+++.+.... .+ ....+|+.+++||++||++.++ +++.
T Consensus 4 ~~~~~~I~~~g~~lP~--~~v~~~~~~~~~~~-----~~-~~~~~~i~~~~Gi~~R~~~~~~--------------e~~~ 61 (353)
T PRK12880 4 RFDKAKISGICVSVPE--HKICIDDELESVFS-----ND-IKTLKRMKKVIGLNTRYICDEN--------------TCVS 61 (353)
T ss_pred cccccEEEEEEEECCC--eEecHHHHHHHhcC-----cc-hhhhhhhhhccCceEEEeCCCC--------------CCHH
Confidence 5678999999999999 88999975443221 11 1124678899999999998755 6889
Q ss_pred HHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCC
Q 016389 187 QVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNW 265 (390)
Q Consensus 187 ~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~ 265 (390)
+|+.+|+++||+++|++|+|||+||++|++ ++..|+++.+|+++||+++++.+||++ +||+|+++||++|++++++++
T Consensus 62 ~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~-~~C~g~~~aL~~A~~~i~~~~ 140 (353)
T PRK12880 62 DLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG-QACAGYLYGLFVAHSLIQSGL 140 (353)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehh-hhhHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999988866 899999999999999999899999996 699999999999999999988
Q ss_pred CCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeeccc
Q 016389 266 NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKR 309 (390)
Q Consensus 266 ~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~ 309 (390)
.+ ||||++|.+|..+++.+ +. ...+|||||+|+||++.+
T Consensus 141 ~~-~LVv~~e~~S~~~~~~d-~~---~~~lFGDGAaA~vl~~~~ 179 (353)
T PRK12880 141 GK-ILLICGDTLSKFIHPKN-MN---LAPIFGDGVSATLIEKTD 179 (353)
T ss_pred CC-EEEEEehhhhccCCccc-CC---ceeeecccceEEEEEecC
Confidence 88 99999999999998764 32 367999999999999754
No 18
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.96 E-value=1.3e-28 Score=243.01 Aligned_cols=168 Identities=17% Similarity=0.282 Sum_probs=147.1
Q ss_pred CeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHHHH
Q 016389 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVM 189 (390)
Q Consensus 110 ~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~la 189 (390)
+++|.++|+|+|+ ++++++++.+..+. ++ +++.+++||++|++.+++ |.+.+|+
T Consensus 3 ~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~------~~i~~~~Gi~~r~~~~~~--------------e~~~~la 56 (326)
T PRK05963 3 SSRIAGFGHAVPD--RRVENAEIEAQLGL----ET------GWIERRTGIRCRRWAAPD--------------ETLSDLA 56 (326)
T ss_pred ccEEEEEEEECCC--CeecHHHHHHHcCC----CH------HHhhhccCCeEEEEcCCC--------------CCHHHHH
Confidence 6899999999999 78999999986542 12 467889999999998665 6789999
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCe
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTY 268 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~ 268 (390)
.+|+++||+++|++|+|||+||++|++ ++..|+.+.+|+++||++ ++.+||+++ ||+|++.||++|.++++++ .++
T Consensus 57 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~-~C~g~~~aL~~A~~~l~~~-~~~ 133 (326)
T PRK05963 57 ASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAG-ACAGFLYALVLADGFVRAQ-GKP 133 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccc-hhhHHHHHHHHHHHHHHcC-CCe
Confidence 999999999999999999999988765 688999999999999997 578999996 9999999999999999987 489
Q ss_pred EEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccc
Q 016389 269 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 269 aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
||||++|.+|..+++++ +. +..+|||||+|+||++++.
T Consensus 134 aLVv~~d~~s~~~~~~~-~~---~~~lfGDgA~A~ll~~~~~ 171 (326)
T PRK05963 134 VLVVAANILSRRINMAE-RA---SAVLFADAAGAVVLAPSAK 171 (326)
T ss_pred EEEEEechhhccCCccc-cC---ceEEEeecceEEEEEecCC
Confidence 99999999998777653 32 4789999999999997653
No 19
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.96 E-value=2.7e-27 Score=233.84 Aligned_cols=170 Identities=16% Similarity=0.279 Sum_probs=147.0
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHHH
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQV 188 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~l 188 (390)
+.++|.++++|+|+ ++++++++.+..+. ++ +++.+++||++|+++. + +.+.+|
T Consensus 3 ~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~------~~i~~~~Gi~~R~~~~-~--------------~~~~~l 55 (329)
T PRK07204 3 RYISIKGIGTYLPK--RKVDSLELDKKLDL----PE------GWVLKKSGVKTRHFVD-G--------------ETSSYM 55 (329)
T ss_pred CCcEEEEEEEeCCC--ceecHHHHHHhhCC----CH------hHhhhccCceEEeecC-C--------------CCHHHH
Confidence 46899999999999 78999999886542 12 4688899999999986 3 467899
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCC-CceeEecCCccchhHHHHHHHHHHHHhcCCC
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRG-NIRSYNLGGMGCSAGVIAVDLAKDLLQVNWN 266 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~-~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~ 266 (390)
+.+|++++|+++|++|+|||+||+++++ ++..|+.+.+|+++||+++ ++.++|++ +||++++.||++|.+++++++.
T Consensus 56 a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~-~~C~~~~~al~~a~~~l~~g~~ 134 (329)
T PRK07204 56 GAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDIN-STCLSFITALDTISYAIECGRY 134 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEcc-chhHHHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999999988755 5668999999999999986 47899998 5999999999999999999988
Q ss_pred CeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccc
Q 016389 267 TYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 267 ~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
++||||++|.+|..+++.+ +. +..+|||||+|+||++.+.
T Consensus 135 ~~~Lvv~~e~~s~~~~~~~-~~---~~~lfGDGAaA~ll~~~~~ 174 (329)
T PRK07204 135 KRVLIISSEISSVGLNWGQ-NE---SCILFGDGAAAVVITKGDH 174 (329)
T ss_pred CEEEEEEeccccCCCCccc-Cc---ceEEEecccEEEEEEEcCC
Confidence 9999999999988766543 22 3689999999999997653
No 20
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.95 E-value=1.8e-27 Score=235.70 Aligned_cols=194 Identities=14% Similarity=0.180 Sum_probs=155.6
Q ss_pred CCCCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHH
Q 016389 107 RPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAE 186 (390)
Q Consensus 107 r~~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~ 186 (390)
|.++++|.++|+|+|+ ++++|+++.+++.....-.... .+++.+++||++|++.+++ +...
T Consensus 2 ~~~~v~I~~~g~~lP~--~~v~~~~~~~~~~~~~~~~~~~---~~~i~~~~Gi~~R~~~~~~--------------~~~~ 62 (338)
T PRK09258 2 KYSNVAILSLAYELAP--VVVTSSEIEERLAPLYERLRLP---PGQLEALTGIRERRWWPEG--------------TQLS 62 (338)
T ss_pred cccceEEEEEEecCCC--ccCcHHHHHHHhhhcccccCCC---hhHhhhhcCceeEecCCCC--------------CCHH
Confidence 4567999999999999 7899999998765321000011 1457778999999997554 4678
Q ss_pred HHHHHHHHHHHHcCCCCCCCcCEEEEeec-CCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCC
Q 016389 187 QVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNW 265 (390)
Q Consensus 187 ~la~~Aa~~aL~kagi~p~dId~LIv~~s-~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~ 265 (390)
+|+.+|++++|+++|++++|||+||++|+ .++..|+++.+|+++||+++++.++|+++ ||+|++.||++|.+++++++
T Consensus 63 ~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~-~C~~~~~al~~A~~~i~~g~ 141 (338)
T PRK09258 63 DGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSN-ACLGFLNGMLDAANMIELGQ 141 (338)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhh-hhHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999998875 47789999999999999987899999985 99999999999999999999
Q ss_pred CCeEEEEEeccCCcCcccC------CC-----cccccccccccCCceEEEeecccccccccceeEEeE
Q 016389 266 NTYAVVVSTENITQNWYFG------NK-----KSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHI 322 (390)
Q Consensus 266 ~~~aLVVstE~~S~~~~~~------~d-----rs~lv~~~LFgDGAAAvLLs~~~~~~~~~~y~L~~~ 322 (390)
.++||||++|.+|..++.+ ++ ....+...+|||||+|+||++++... ..++++..
T Consensus 142 ~~~~Lvv~~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~--~~~~~~~~ 207 (338)
T PRK09258 142 IDYALVVSGESAREIVEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHP--RGHRLLGG 207 (338)
T ss_pred CCEEEEEEecccchhccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCC--Ccceeeee
Confidence 9999999999998876542 11 11224468999999999999865321 13455543
No 21
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=99.95 E-value=1e-26 Score=227.70 Aligned_cols=169 Identities=17% Similarity=0.310 Sum_probs=148.1
Q ss_pred CeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHHHH
Q 016389 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVM 189 (390)
Q Consensus 110 ~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~la 189 (390)
+++|.++++|+|+ ++++++++.+..+. ++ +++.+++||++|++++++ +.+.+|+
T Consensus 1 ~~~I~~i~~~lP~--~~~~~~~~~~~~~~----~~------~~~~~~~Gi~~r~~~~~~--------------~~~~~la 54 (320)
T cd00830 1 NARILGIGSYLPE--RVVTNDELEKRLDT----SD------EWIRTRTGIRERRIADPG--------------ETTSDLA 54 (320)
T ss_pred CCEEEEEEEECCC--cEEcHHHHHHHcCC----CH------HHhhhccCceEEeeCCCC--------------CCHHHHH
Confidence 5799999999999 78999999987642 12 467889999999998765 5789999
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCe
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTY 268 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~ 268 (390)
.+|++++|+++|++++|||+||+++++ +...|+.+.+|++++|++ ++..++++ +||++++.||++|.+++++++.++
T Consensus 55 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 132 (320)
T cd00830 55 VEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDIN-AACSGFLYGLSTAAGLIRSGGAKN 132 (320)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 999999999999999999999988765 556899999999999997 68999998 699999999999999999999999
Q ss_pred EEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccc
Q 016389 269 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 269 aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
||||++|.++..+++.+ +. ...+|||||+|+||++.+.
T Consensus 133 vLvv~~e~~s~~~~~~~-~~---~~~~~GDgAaA~ll~~~~~ 170 (320)
T cd00830 133 VLVVGAETLSRILDWTD-RS---TAVLFGDGAGAVVLEATEE 170 (320)
T ss_pred EEEEEehhhccccCccc-CC---ceEEEeccceEEEEEecCC
Confidence 99999999998776543 22 4689999999999998764
No 22
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=99.95 E-value=1.5e-26 Score=233.89 Aligned_cols=171 Identities=16% Similarity=0.220 Sum_probs=147.8
Q ss_pred CCCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHH
Q 016389 108 PRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQ 187 (390)
Q Consensus 108 ~~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~ 187 (390)
+.+++|+++|+|+|+ ++++|+++.+..+. ++ .+|.+++||++|++..++ +.+.+
T Consensus 45 ~~~~~I~g~g~~lP~--~~v~n~el~~~~~~----~~------~~i~~~tGi~~R~~~~~~--------------~~~~~ 98 (379)
T PLN02326 45 GSGSKLVGCGSAVPK--LLITNDDLSKLVDT----SD------EWIATRTGIRNRRVLSGD--------------ETLTS 98 (379)
T ss_pred cCCcEEEEEEEECCC--ceecHHHHHHhcCC----ch------hheecccCcceEeecCCC--------------CCHHH
Confidence 347999999999999 78999999986542 12 468899999999987554 56899
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCC
Q 016389 188 VMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNT 267 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~ 267 (390)
|+.+|+++||+++|++|+|||+||++|++....|+.+..|+++||++ ++.+||++ +||+|++.||++|.+++++++.+
T Consensus 99 La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~-~~~~~dv~-~~Ca~~~~aL~~A~~~l~~g~~~ 176 (379)
T PLN02326 99 LAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCT-NALAFDLT-AACSGFVLGLVTAARFIRGGGYK 176 (379)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCC-CCceeecc-ccchHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999998876544567899999999998 78999998 59999999999999999999999
Q ss_pred eEEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccc
Q 016389 268 YAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 268 ~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
+||||++|.+|..+++.+ +. ...+|||||+|+||++++.
T Consensus 177 ~vLVv~~e~~s~~~~~~d-~~---~~~lfGDGAaAvlL~~~~~ 215 (379)
T PLN02326 177 NVLVIGADALSRYVDWTD-RG---TCILFGDGAGAVVLQACDD 215 (379)
T ss_pred EEEEEEechhcCCCCccc-cC---ceEEEcceeEEEEEEEcCC
Confidence 999999999998777653 43 2469999999999998754
No 23
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.95 E-value=2.2e-26 Score=226.48 Aligned_cols=170 Identities=16% Similarity=0.301 Sum_probs=148.3
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHHH
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQV 188 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~l 188 (390)
.+++|.++|+|+|+ ++++++++.+..+. ++ +++.+++||++|++.+++ +.+.+|
T Consensus 3 ~~~~I~~ig~~~P~--~~v~~~e~~~~~~~----~~------~~i~~~~Gi~~r~~~~~~--------------~~~~~l 56 (325)
T PRK12879 3 SYARITGIGTYVPP--RVLTNDDLETFIDT----SD------EWIVQRTGIKERRIAHVE--------------EYTSDL 56 (325)
T ss_pred CCCEEEEEEEECCC--cEEcHHHHHHhcCC----CH------HHhhhccCceEEEECCCC--------------CCHHHH
Confidence 46899999999999 78999999986542 22 358889999999998665 578999
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCC
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNT 267 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~ 267 (390)
+.+|++++|+++|++|+|||+||+++++ ++..|+.+.+|+++||++ ++..++++ +||+|++.||++|.+++++++.+
T Consensus 57 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~-~~C~~~~~al~~A~~~l~~g~~~ 134 (325)
T PRK12879 57 AIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDIN-AACAGFLYGLETANGLITSGLYK 134 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEEC-ccchHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999988764 677899999999999997 47899998 69999999999999999999999
Q ss_pred eEEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccc
Q 016389 268 YAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 268 ~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
+||||++|.+|..+++.+ +. ..++|||||+|+||++++.
T Consensus 135 ~~Lvv~~e~~s~~~~~~~-~~---~~~~~GDgAaA~ll~~~~~ 173 (325)
T PRK12879 135 KVLVIGAERLSKVTDYTD-RT---TCILFGDGAGAVVLEATEN 173 (325)
T ss_pred EEEEEEehhhcCcCCccc-cC---ceEEEeecceEEEEEecCC
Confidence 999999999988766543 33 3579999999999998764
No 24
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.94 E-value=1.2e-25 Score=226.43 Aligned_cols=204 Identities=14% Similarity=0.248 Sum_probs=157.1
Q ss_pred CeEEEEEeEEeCCCCCccCHHHHHHHHhhc-CCCCcch---H----------HHHHHHHHHcCCCceeeecCC----CcC
Q 016389 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLT-GDFDESS---L----------EFQRKILERSGLGEETYFPEA----MHA 171 (390)
Q Consensus 110 ~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~-~~~~~~~---~----------~~~~rI~~rsGI~~R~~~p~~----~~~ 171 (390)
+|+|.++|+|+|+ ++++|+++.+++... ..++++. + ...++|.+++||++|+++++. ...
T Consensus 2 ~~~I~~~g~~lP~--~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~ 79 (372)
T PRK07515 2 NVVISGTGLYTPP--ESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPDR 79 (372)
T ss_pred CcEEEEEEeecCC--ccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcccc
Confidence 5899999999999 789999999875321 0111100 0 013678899999999997531 111
Q ss_pred CCC--CcchHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccch
Q 016389 172 IPP--KPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCS 248 (390)
Q Consensus 172 ~pp--~~~~~~~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCs 248 (390)
.++ +.+.....+.+.+|+.+|+++||+++|++++|||.+|++|++ +...|+.+.+|+++||++ ..+++++ +||+
T Consensus 80 ~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~-~aCa 156 (372)
T PRK07515 80 MRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMN-VACS 156 (372)
T ss_pred cCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEec-chhH
Confidence 111 333333445678999999999999999999999999988764 678999999999999997 4678986 6999
Q ss_pred hHHHHHHHHHHHHhcCCCCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccccccccceeEEeE
Q 016389 249 AGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHI 322 (390)
Q Consensus 249 ggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~~~~~~~y~L~~~ 322 (390)
+++.||.+|.++++++..++||||++|.+|..+++.+ ++ .+.+|||||+|+||++.+....+.+|+++..
T Consensus 157 sg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~d-~~---~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~ 226 (372)
T PRK07515 157 SATFGIQTAANAIRSGSARRVLVVNPEICSGHLNFRD-RD---SHFIFGDVATAVIVERADTATSAGGFEILGT 226 (372)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeeecccccccccC-CC---CCEEecCccEEEEEeeccccccCCCceEEEE
Confidence 9999999999999999999999999999998776543 33 3689999999999998654322345666654
No 25
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.94 E-value=5.7e-26 Score=229.53 Aligned_cols=185 Identities=20% Similarity=0.238 Sum_probs=149.4
Q ss_pred CeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHHHH
Q 016389 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVM 189 (390)
Q Consensus 110 ~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~la 189 (390)
+|+|.++|+|+|+ ++++|+++.++++.... ......+||++++||++|+++.+.. ..+. +...+|+
T Consensus 2 ~v~I~gig~~lP~--~~v~n~~~~~~~~~~~~---~~~~~~~~i~~~~Gi~~R~~~~~~~--~~~~-------~~~~~La 67 (378)
T PRK06816 2 NVYITSTGAFLPG--EPVSNDEMEAYLGLING---KPSRARRIILRNNGIKTRHYALDPE--GRPT-------HSNAQMA 67 (378)
T ss_pred CeEEEeeeecCCC--CccCHHHHHHHHhhccC---CcHHHHHHHHHhCCCceEEEEECCC--CCCC-------CCHHHHH
Confidence 5899999999999 78999999998775421 1111236899999999999975421 0111 2468999
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCe
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTY 268 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~ 268 (390)
.+|+++||+++|++|+|||+||++|++ ++..|+.+..|+++||+++ +.+++++ ++|+|++.||++|.+++++++.++
T Consensus 68 ~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~-~~~~~v~-~~Cas~~~al~~A~~~i~sg~~~~ 145 (378)
T PRK06816 68 AEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAPP-IEVVSSA-GVCAAGMMALKYAYLSVKAGESRN 145 (378)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCCC-Cceeeec-CcCHHHHHHHHHHHHHHHCCCCCE
Confidence 999999999999999999999998754 5788999999999999984 7899996 699999999999999999999999
Q ss_pred EEEEEeccCCcCcccCCC-----------c--c----cccccccccCCceEEEeecccc
Q 016389 269 AVVVSTENITQNWYFGNK-----------K--S----MLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 269 aLVVstE~~S~~~~~~~d-----------r--s----~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
||||++|.+|..+++.+. + . .-..+++|||||+|+||++.+.
T Consensus 146 vLvv~~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~ 204 (378)
T PRK06816 146 AVATASELASRWFRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPR 204 (378)
T ss_pred EEEEeEccchhhhhhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCC
Confidence 999999999988775320 1 0 0112458999999999998664
No 26
>PRK06840 hypothetical protein; Validated
Probab=99.94 E-value=1.2e-25 Score=223.03 Aligned_cols=173 Identities=20% Similarity=0.240 Sum_probs=145.4
Q ss_pred CCCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHH
Q 016389 108 PRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQ 187 (390)
Q Consensus 108 ~~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~ 187 (390)
|++++|.+++.|+|+ .+++++++.+..+. ++ +++.+++||++|++.+++ +...+
T Consensus 2 ~~~v~I~~~~~~lP~--~~v~~~~l~~~~g~----~~------~~~~~~~Gi~~r~~~~~~--------------~~~~~ 55 (339)
T PRK06840 2 EMNVGIVGTGVYLPK--DVMTAEEIAEKTGI----PE------EVVIEKFGIYEKPVPGPE--------------DHTSD 55 (339)
T ss_pred CCceEEEEEEEeCCC--cccCHHHHHHHhCC----CH------HHHhhhcCcceEeeCCCC--------------CCHHH
Confidence 568999999999999 78999999886652 22 356789999999998765 57899
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEeecC--CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcC-
Q 016389 188 VMYGALDNLFSNTNVNPKDIGILVVNCSL--FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN- 264 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dId~LIv~~s~--~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~- 264 (390)
|+.+|++++|+++|++|+|||+||+++++ ++..|+.+.+|++++|++ ++.+++++ +||++++.||++|.++++++
T Consensus 56 la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~-~~C~~~~~al~~A~~~l~~~g 133 (339)
T PRK06840 56 MAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIM-AVCASFPIALKVAKDLLYSDP 133 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Cccccccc-ccchHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999976543 667999999999999997 67899997 59999999999999999994
Q ss_pred CCCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccc
Q 016389 265 WNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 265 ~~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
..+++|||++|..+..+++.+.....+ ..|||||+|+||++++.
T Consensus 134 ~~~~~Lvv~~~~~s~~~~~~~~~~~~~--~~~GDgAaA~ll~~~~~ 177 (339)
T PRK06840 134 SIENVLLVGGYRNSDLVDYDNPRTRFM--FNFAAGGSAALLKKDAG 177 (339)
T ss_pred CccEEEEEeecccccccCcCCCCeeee--ccCCCceeEEEEEecCC
Confidence 568899999999988777654322211 24899999999997653
No 27
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=99.93 E-value=8.2e-26 Score=223.50 Aligned_cols=169 Identities=13% Similarity=0.245 Sum_probs=145.8
Q ss_pred CeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHHHH
Q 016389 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVM 189 (390)
Q Consensus 110 ~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~la 189 (390)
.++|.++|.|+|+ ++++|+++.++++. ++ .+|.+++||++|++.++. +.+.+|+
T Consensus 2 ~v~I~~~g~~lP~--~~v~~~e~~~~~~~-----~~-----~~i~~~~gi~~r~~~~~~--------------~~~~~la 55 (326)
T CHL00203 2 GVHILSTGSSVPN--FSVENQQFEDIIET-----SD-----HWISTRTGIKKRHLAPSS--------------TSLTKLA 55 (326)
T ss_pred ccEEEEEEEECCC--eEEcHHHHHHhcCC-----Ch-----hhEeeccCeEEEEeCCCC--------------CCHHHHH
Confidence 5899999999999 78999999987652 11 367899999999987665 5679999
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeE
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYA 269 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~a 269 (390)
.+|++++|+++|++|+|||.||++|++....++.+..++++||++ ++.+++++ +||++|+.||++|.++++++..++|
T Consensus 56 ~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~~~~~~v~~~Lg~~-~~~~~~v~-~~Casg~~al~~A~~~i~sg~~~~~ 133 (326)
T CHL00203 56 AEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGAT-RAVAFDIT-AACSGFILALVTATQFIQNGSYKNI 133 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCchHHHHHHHhCCC-CCceeeec-ccchhHHHHHHHHHHHHHcCCCCEE
Confidence 999999999999999999999998765433456688999999998 57889998 5999999999999999999999999
Q ss_pred EEEEeccCCcCcccCCCcccccccccccCCceEEEeecccc
Q 016389 270 VVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 270 LVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
|||++|.+|..+++.+ +. .+.+|||||+|+||++.+.
T Consensus 134 Lvv~~e~~s~~~~~~~-~~---~~~~fgDga~A~ll~~~~~ 170 (326)
T CHL00203 134 LVVGADTLSKWIDWSD-RK---TCILFGDGAGAAIIGASYE 170 (326)
T ss_pred EEEEehhhhCcCCccc-CC---ceEEEcceeeEEEEEEcCC
Confidence 9999999998887664 32 3689999999999997653
No 28
>PRK04262 hypothetical protein; Provisional
Probab=99.93 E-value=9.9e-25 Score=217.87 Aligned_cols=166 Identities=17% Similarity=0.278 Sum_probs=142.4
Q ss_pred CeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHHHH
Q 016389 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVM 189 (390)
Q Consensus 110 ~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~la 189 (390)
.++|.++|+|+|+ .+++++++.+..+. ++ +||.+++||++|++.+++ +.+.+|+
T Consensus 2 ~v~I~~~g~ylP~--~~v~~~el~~~~~~----~~------~~i~~~~Gi~~R~~~~~~--------------~~~~~la 55 (347)
T PRK04262 2 MVGIVGYGAYIPR--YRIKVEEIARVWGD----DP------EAIKRGLGVEEKSVPGPD--------------EDTATIA 55 (347)
T ss_pred ceeEEEEEEeCCC--EEecHHHHHHHhCc----CH------HHHhhccCeeeeecCCCC--------------cCHHHHH
Confidence 5899999999999 88999999987652 22 478899999999998665 6789999
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCe
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTY 268 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~ 268 (390)
.+|+++||+++|++|+|||+||++|++ ++..|+.+.+|+++||+++++.++|++ +||+|++.||++|.+++++++.++
T Consensus 56 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~-~~C~~~~~aL~~A~~~i~sg~~~~ 134 (347)
T PRK04262 56 VEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLE-FACKAGTAALQAAMGLVKSGMIKY 134 (347)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCE
Confidence 999999999999999999999988754 667899999999999998778899996 599999999999999999999999
Q ss_pred EEEEEeccCCcCcccCCCcccccccccccCCceEEEeeccc
Q 016389 269 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKR 309 (390)
Q Consensus 269 aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~ 309 (390)
||||++|... ..++ ++. ...|||||+|+||++.+
T Consensus 135 aLVv~~e~~~--~~~~-~~~----~~~~GDGA~A~ll~~~~ 168 (347)
T PRK04262 135 ALAIGADTAQ--GAPG-DAL----EYTAAAGGAAFIIGKEE 168 (347)
T ss_pred EEEEEEeeec--cCCC-CCC----CCcCCCCcEEEEEecCc
Confidence 9999999842 2222 221 24689999999999743
No 29
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=99.93 E-value=2e-24 Score=212.14 Aligned_cols=169 Identities=18% Similarity=0.326 Sum_probs=145.9
Q ss_pred CeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHHHH
Q 016389 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVM 189 (390)
Q Consensus 110 ~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~la 189 (390)
.+.|.++++|+|+ ++++++++.+..+. ++ .++.+++||++|++..++ +.+.+|+
T Consensus 2 ~~~I~~i~~~~P~--~~~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~--------------~~~~~la 55 (318)
T TIGR00747 2 YAGILGTGSYLPE--KVLTNADLEKMVDT----SD------EWIVTRTGIKERRIAADD--------------ETSSTMG 55 (318)
T ss_pred CCEEEEEEEECCC--ceecHHHHHHhcCC----ch------HHeecccCceEEEECCCC--------------CCHHHHH
Confidence 4899999999999 78999999886652 11 357889999999987655 5789999
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCe
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTY 268 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~ 268 (390)
.+|++++|+++|++|+|||.+|+++++ ++..|+.+.++++++|++ ++.+++++ +||++++.||++|.+++++++.++
T Consensus 56 ~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 133 (318)
T TIGR00747 56 FEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLS-AACAGFIYALSVAKQYIESGKYKT 133 (318)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 999999999999999999999988754 667899999999999998 57899997 699999999999999999999999
Q ss_pred EEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccc
Q 016389 269 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 269 aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
+|||++|..+..+++.+ +. ...+|||||+|+||++++.
T Consensus 134 ~Lvv~~e~~~~~~~~~~-~~---~~~~~GDGAaA~lL~~~~~ 171 (318)
T TIGR00747 134 VLVVGAEKLSSTLDWTD-RG---TCVLFGDGAGAVVLGESED 171 (318)
T ss_pred EEEEEehhhcCcCCcCC-CC---eEEEEecceeEEEEeecCC
Confidence 99999999887766543 33 2568999999999998764
No 30
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.92 E-value=1.2e-23 Score=206.54 Aligned_cols=170 Identities=18% Similarity=0.319 Sum_probs=146.0
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHHH
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQV 188 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~l 188 (390)
..|+|.++++|+|+ ++++++++.++.+. ++ ++|.+++||++|++..++ +...+|
T Consensus 2 ~~v~I~ai~~~lP~--~~~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~--------------~~~~~l 55 (319)
T PRK09352 2 MYAKILGTGSYLPE--RVVTNDDLEKMVDT----SD------EWIVTRTGIKERRIAAPD--------------ETTSDL 55 (319)
T ss_pred CceEEEEEEEECCC--eEEcHHHHHHHcCC----CH------HHhhhhcCeEEEEeCCCC--------------CCHHHH
Confidence 46899999999999 78999999987652 11 367889999999876544 567999
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCC
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNT 267 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~ 267 (390)
+.+|++++|+++|++++|||.+|+++++ +...|+.+.+|++++|++ ++..++++ +||++|+.||.+|.+++++++.+
T Consensus 56 a~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~i~~g~~~ 133 (319)
T PRK09352 56 ATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLS-AACSGFVYALSTADQFIRSGAYK 133 (319)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeecc-ccchhHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999988764 556899999999999995 68889997 69999999999999999999999
Q ss_pred eEEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccc
Q 016389 268 YAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 268 ~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
+||||++|.+|..+++.+ +. ...+|||||+|+||++++.
T Consensus 134 ~vLvv~~e~~s~~~~~~~-~~---~~~~~gDGaaA~ll~~~~~ 172 (319)
T PRK09352 134 NVLVIGAEKLSRIVDWTD-RS---TCVLFGDGAGAVVLGASEE 172 (319)
T ss_pred EEEEEEehhhccccCccc-CC---ceEEEeccceEEEEEEcCC
Confidence 999999999987766543 32 2579999999999998764
No 31
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=99.92 E-value=7.6e-24 Score=207.71 Aligned_cols=177 Identities=19% Similarity=0.278 Sum_probs=148.6
Q ss_pred CeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHHHH
Q 016389 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVM 189 (390)
Q Consensus 110 ~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~la 189 (390)
.|+|.++++|+|+ ++++++++.+..+.. ++.+++||++|++..+. +...+|+
T Consensus 1 ~v~I~~i~~~lP~--~~v~~~~~~~~~~~~------------~~~~~~gi~~r~~~~~~--------------~~~~~l~ 52 (324)
T cd00827 1 DVGIEAIGAYLPR--YRVDNEELAEGLGVD------------PGKYTTGIGQRHMAGDD--------------EDVPTMA 52 (324)
T ss_pred CccEEEEEecCCc--eeecHHHHHHHhCCC------------cceeeeecceeEecCCC--------------CCHHHHH
Confidence 4789999999999 789999998875521 46678999999997543 4679999
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCe
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTY 268 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~ 268 (390)
.+|++++|+++|++++|||.||+++++ ....|+.+.+|++++|++ ++.+++++ +||++++.||.+|.+++++++.++
T Consensus 53 ~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 130 (324)
T cd00827 53 VEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLK-QACYGGTAALQLAANLVESGPWRY 130 (324)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 999999999999999999999988764 445889999999999998 78999998 699999999999999999999999
Q ss_pred EEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccccccccceeEEeEEe
Q 016389 269 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVR 324 (390)
Q Consensus 269 aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~~~~~~~y~L~~~vr 324 (390)
+|||++|.++...+.. ++ ..++|||||+|+||+..+.. ..+++..+..
T Consensus 131 vlvv~~e~~~~~~~~~-~~----~~~~~gdgaaA~ll~~~~~~---~~~~i~~~~~ 178 (324)
T cd00827 131 ALVVASDIASYLLDEG-SA----LEPTLGDGAAAMLVSRNPGI---LAAGIVSTHS 178 (324)
T ss_pred EEEEEEHHhhhcccCC-CC----ccccccCceEEEEEecCccc---ccCCceeeee
Confidence 9999999998776522 12 46899999999999987642 1245555443
No 32
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=99.91 E-value=5.5e-24 Score=212.68 Aligned_cols=165 Identities=16% Similarity=0.240 Sum_probs=141.3
Q ss_pred eEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHHHHH
Q 016389 111 VYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMY 190 (390)
Q Consensus 111 VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~la~ 190 (390)
+.|.++|+|+|+ ++++++++.+..+. ++ ++|.+++||++|++++++ +.+.+|+.
T Consensus 2 ~~I~g~g~~lP~--~~v~n~~l~~~~~~----~~------~~i~~~~Gi~~r~v~~~~--------------~~~~~la~ 55 (345)
T TIGR00748 2 AGIVGYGAYIPM--YRIKVEEIARVWGK----DP------ESISNGLPVEEKAVPGLD--------------EDTATIGV 55 (345)
T ss_pred ccEEEEEEeCCC--eeecHHHHHHHhCC----CH------hHeeeccceeeeecCCCC--------------CCHHHHHH
Confidence 679999999999 78999998876542 22 367789999999998765 67899999
Q ss_pred HHHHHHHHcCCCCCCCcCEEEEeec-CCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeE
Q 016389 191 GALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYA 269 (390)
Q Consensus 191 ~Aa~~aL~kagi~p~dId~LIv~~s-~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~a 269 (390)
+|+++||+++|++|+|||+||++|+ .++..|+.+..|++++|+++++.++|+++ ||+|++.||++|.++++++..++|
T Consensus 56 ~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~~-aC~g~~~al~~A~~~i~sg~~~~v 134 (345)
T TIGR00748 56 EAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLEF-ACKAGTAGIQACMGLVASGMIKYG 134 (345)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHHH-hHHHHHHHHHHHHHHHHcCCCCEE
Confidence 9999999999999999999998775 45667999999999999987889999974 999999999999999999989999
Q ss_pred EEEEeccCCcCcccCCCcccccccccccCCceEEEeeccc
Q 016389 270 VVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKR 309 (390)
Q Consensus 270 LVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~ 309 (390)
|||++|..+.. ++ ++ ....|||||+|+||+..+
T Consensus 135 LVv~~d~~~~~--~~-~~----~~~~~GDGAaA~vl~~~~ 167 (345)
T TIGR00748 135 LAIGADTAQGA--PG-DA----LEYTAGAGGAAYIIGEKN 167 (345)
T ss_pred EEEEEeecccC--CC-cc----CcccCCCceEEEEEccCC
Confidence 99999998632 22 22 135789999999999654
No 33
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=99.89 E-value=2.8e-22 Score=206.60 Aligned_cols=165 Identities=18% Similarity=0.298 Sum_probs=139.5
Q ss_pred CCCCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeee--cCCCcCCCCCcchHHHHHH
Q 016389 107 RPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYF--PEAMHAIPPKPSMAAAREE 184 (390)
Q Consensus 107 r~~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~--p~~~~~~pp~~~~~~~~ee 184 (390)
+|++|.|.++|.|+|+ ++++++++.++.+. ++ .|+ ++||++|++. +++ |.
T Consensus 1 ~~~~vgI~gig~Y~P~--~~v~n~eLa~~~g~----~~------~~~--~~GI~~r~~ava~~~--------------Ed 52 (459)
T PLN02577 1 MPKNVGILAMEVYFPP--TCVQQEALEAHDGV----SK------GKY--TIGLGQDCMAFCTDV--------------ED 52 (459)
T ss_pred CCCccEEEEEEEeCCC--eEEcHHHHHHHhCC----CH------HHH--hhccceeEeccCCCC--------------CC
Confidence 4788999999999999 88999999887653 22 244 6899999974 333 78
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHH---HHcCCCCCceeEecCCccchhHHHHHHHHHHH
Q 016389 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIV---NKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260 (390)
Q Consensus 185 a~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~---~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~l 260 (390)
+.+|+.+|++++|+++|++|++||+||++|++ ....|+.+..|+ ++||.+ ++.+||+++ +|+||+.||.+|.++
T Consensus 53 ~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~~-AC~G~~~AL~~A~~~ 130 (459)
T PLN02577 53 VISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDSTN-ACYGGTAALLNCVNW 130 (459)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehhh-hhHHHHHHHHHHHHH
Confidence 89999999999999999999999999999855 578999999886 678875 799999995 999999999999999
Q ss_pred HhcCC--CCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeeccc
Q 016389 261 LQVNW--NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKR 309 (390)
Q Consensus 261 L~a~~--~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~ 309 (390)
++++. .++||||++|..+....++ ...+||||+|+||+..+
T Consensus 131 i~sg~~~~~~aLVV~aD~a~~~~~~~--------e~t~GdGA~A~lv~~~~ 173 (459)
T PLN02577 131 VESSSWDGRYGLVVAADSAVYAEGPA--------RPTGGAGAVAMLVGPNA 173 (459)
T ss_pred HHcCCCCCCeEEEEEechhhccCCCC--------CCCCCcceEEEEEccCC
Confidence 99986 5999999999977654432 23469999999998644
No 34
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=99.89 E-value=1.7e-22 Score=204.47 Aligned_cols=163 Identities=14% Similarity=0.192 Sum_probs=138.9
Q ss_pred eEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHHHHH
Q 016389 111 VYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMY 190 (390)
Q Consensus 111 VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~la~ 190 (390)
|.|.+++.|+|+ ++++++++.++.+. ++ +|+.+..|+++|++.+++ |.+.+|+.
T Consensus 1 iGI~~i~~y~P~--~~v~~~ela~~~g~----~~------~~~~~g~G~~~~~~~~~~--------------ed~~~la~ 54 (379)
T TIGR01835 1 IGIDKISFFTPQ--NYLDMTALAEARGV----DP------EKFHIGIGQKKMAVPPID--------------EDIVTMAA 54 (379)
T ss_pred CCEeEEEEECCC--EEeeHHHHHHHhCC----CH------HHHHhhcCceEEeeCCCC--------------CCHHHHHH
Confidence 579999999999 88999999986542 22 467789999999987665 56899999
Q ss_pred HHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeE
Q 016389 191 GALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYA 269 (390)
Q Consensus 191 ~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~a 269 (390)
+|++++|+++ +|+|||+||++|++ ....|+.+..|+++||+++++.++|+. ++|+||+.||.+|.+++++++.++|
T Consensus 55 ~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~-~aC~gg~~aL~~A~~~i~s~~~~~a 131 (379)
T TIGR01835 55 SAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELK-QACYGATAALQMAKGHVALSPDRKV 131 (379)
T ss_pred HHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEec-cccHHHHHHHHHHHHHHHcCCCCeE
Confidence 9999999998 89999999988754 666799999999999999889999997 5999999999999999999999999
Q ss_pred EEEEeccCCcCcccCCCcccccccccccCCceEEEeeccc
Q 016389 270 VVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKR 309 (390)
Q Consensus 270 LVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~ 309 (390)
|||++|...... . +. ...+|||||+|+||+.++
T Consensus 132 LVv~~D~a~~~~--~-~~----~~~~~GdGA~A~Ll~~~~ 164 (379)
T TIGR01835 132 LVIASDIAKYGL--E-SP----GEPTQGAGAVAMLVSADP 164 (379)
T ss_pred EEEEeehhhccc--C-CC----CCccccCccEEEEEecCC
Confidence 999999854321 1 11 246899999999999764
No 35
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=99.87 E-value=1.6e-21 Score=200.71 Aligned_cols=164 Identities=16% Similarity=0.280 Sum_probs=135.3
Q ss_pred CeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceee--ecCCCcCCCCCcchHHHHHHHHH
Q 016389 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETY--FPEAMHAIPPKPSMAAAREEAEQ 187 (390)
Q Consensus 110 ~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~--~p~~~~~~pp~~~~~~~~eea~~ 187 (390)
+|.|.+++.|+|+ .+++++++.++.+. ++ .|+ ++||++|+. .++. |.+.+
T Consensus 1 ~vgI~~ig~y~P~--~~v~~~eLa~~~g~----~~------~k~--~~GI~~rr~av~~~~--------------Ed~~t 52 (454)
T TIGR01833 1 DVGILALEIYFPS--QYVDQAELEKYDGV----SA------GKY--TIGLGQTKMGFCTDR--------------EDINS 52 (454)
T ss_pred CcEEEEEEEeCCC--eEEcHHHHHHhcCC----CH------HHh--eechhheecccCCCC--------------CCHHH
Confidence 5789999999999 88999999876542 22 243 689999994 4443 78899
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEee-cCCCCCCCHHHHHHHHcCC--CCCceeEecCCccchhHHHHHHHHHHHHhcC
Q 016389 188 VMYGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRL--RGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dId~LIv~~-s~~~~~Psla~~I~~~LgL--r~~v~~~dl~gmGCsggl~aL~lA~~lL~a~ 264 (390)
|+.+|++++|+++|++|++||+||+.| |.....|+.+.+|++.||+ .+++.+||+.+ +|+||+.||.+|.++++++
T Consensus 53 ma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~~~~~fDi~~-AC~G~t~AL~~A~~~i~s~ 131 (454)
T TIGR01833 53 LCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTTN-ACYGGTAALFNAINWIESS 131 (454)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCCCceEEeccc-cchhHHHHHHHHHHHHHcC
Confidence 999999999999999999999999988 5578899999999996553 34899999985 9999999999999999987
Q ss_pred C--CCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccc
Q 016389 265 W--NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 265 ~--~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
. .++||||++|+. .| ++ .+ ...+|||||+|+||+.++.
T Consensus 132 ~~~~~~aLVV~sDia---~y-~~-~~---~~~t~GaGAvAmLv~~~~~ 171 (454)
T TIGR01833 132 SWDGRYALVVAGDIA---VY-AK-GN---ARPTGGAGAVAMLIGPNAP 171 (454)
T ss_pred CcCCCeEEEEEeccc---cc-cC-CC---eeeccccceEEEEeccCcc
Confidence 5 599999999993 12 11 11 1347899999999997764
No 36
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.73 E-value=8e-17 Score=152.19 Aligned_cols=108 Identities=14% Similarity=0.238 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHh
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
...+|+.+|++++|+++|++++|||.||++++. ....|+.+.+|++++|++ +..++++. .||++++.||++|.++++
T Consensus 6 ~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~-~~C~s~~~al~~A~~~i~ 83 (254)
T cd00327 6 TASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVN-QACATGLTALALAVQQVQ 83 (254)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceec-cHhHHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999875 455899999999999997 78899998 699999999999999999
Q ss_pred cCCCCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccc
Q 016389 263 VNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 263 a~~~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
.+..++|||+++|. ++|||||+|+||++++.
T Consensus 84 ~g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~ 114 (254)
T cd00327 84 NGKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEH 114 (254)
T ss_pred CCCCCEEEEEecce-----------------eeecceEEEEEECcHHH
Confidence 99999999999998 78999999999998654
No 37
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=99.71 E-value=4e-16 Score=155.61 Aligned_cols=166 Identities=18% Similarity=0.290 Sum_probs=141.2
Q ss_pred CeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHHHH
Q 016389 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVM 189 (390)
Q Consensus 110 ~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~la 189 (390)
.+.|.+++.|.|. +++.++++.+.-+. +. +++.+-.|++++.+.|.+ |.+..|+
T Consensus 2 ~iGI~~~g~y~p~--~~i~~~ela~~~g~----d~------~k~~~gl~~~e~sv~~~~--------------ED~vTma 55 (377)
T COG3425 2 MIGIVGIGAYIPR--YRIKLEELARAWGV----DP------EKIKKGLGVEEKSVPPWD--------------EDAVTMA 55 (377)
T ss_pred ccccceEEEeccc--eEeeHHHHHhhcCC----Ch------HHhhhccccccccCCCCc--------------hhHHHHH
Confidence 5789999999999 89999998874331 22 467778899999987765 8999999
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeec-CCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCe
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTY 268 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s-~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~ 268 (390)
++|++++|++.++||++|+.|++.|. .....=+.+..|++.||+.+++.++|+-+ +|-||..||+.|.+++.++++++
T Consensus 56 veAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~-AC~agT~aL~~a~~~v~s~~~~~ 134 (377)
T COG3425 56 VEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEF-ACYAGTAALQAAIGWVESGMISY 134 (377)
T ss_pred HHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHH-HHHHHHHHHHHHHHHHHcCCccc
Confidence 99999999999999999999999984 45567788999999999999999999986 99999999999999999999999
Q ss_pred EEEEEeccCCcCcccCCCcccccccccccCCceEEEeeccc
Q 016389 269 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKR 309 (390)
Q Consensus 269 aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~ 309 (390)
+|||++|+.-. .+++. .-...|+||+|+|++..+
T Consensus 135 ~LvI~sD~a~~--~~~~~-----~E~t~GAGavA~lIg~n~ 168 (377)
T COG3425 135 GLVIGADTAQY--APGDA-----LEYTAGAGAVAFLIGKNP 168 (377)
T ss_pred eEEEeehhhcc--CCCcc-----cCccCCCceEEEEEccCC
Confidence 99999998632 22211 134689999999999753
No 38
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.68 E-value=1.2e-16 Score=144.48 Aligned_cols=167 Identities=22% Similarity=0.286 Sum_probs=122.6
Q ss_pred CCCCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHH
Q 016389 107 RPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAE 186 (390)
Q Consensus 107 r~~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~ 186 (390)
||.+|.|.+++.|.|. +.++.+++.++-+. +.. |+..-.|.++..+.++. |.+.
T Consensus 1 ~p~~VGI~~i~~y~p~--~~v~~~~La~~~g~----d~~------K~~~glgq~~~av~~~~--------------ED~v 54 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPR--YYVDQEELAEARGV----DPG------KYTIGLGQEKMAVPPPD--------------EDIV 54 (174)
T ss_dssp --SSEEEEEEEEE-ES--EEEEHHHHHHHTTS-----TC------HHHTTT--SEEEE--TT--------------S-HH
T ss_pred CCccccEeEEEEecCc--eEecHHHHHHHhCC----CHH------HhhhhcCeeEEEeCCCc--------------ccHH
Confidence 7999999999999999 88999998775442 222 33333344445565554 7899
Q ss_pred HHHHHHHHHHHHcCCCCCCCcCEEEEee-cCCCCCCCHHHHHHHHcCC--CCCceeEecCCccchhHHHHHHHHHHHHhc
Q 016389 187 QVMYGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRL--RGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (390)
Q Consensus 187 ~la~~Aa~~aL~kagi~p~dId~LIv~~-s~~~~~Psla~~I~~~LgL--r~~v~~~dl~gmGCsggl~aL~lA~~lL~a 263 (390)
.|+..|++++|++.+++|++|+.|+|.| |.....=+.+.+|++.||+ .+++..+++-+ +|.||..||..|.+++++
T Consensus 55 TmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~-ACygGTaAL~~a~~~v~s 133 (174)
T PF01154_consen 55 TMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQ-ACYGGTAALQNAVNWVAS 133 (174)
T ss_dssp HHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEES-GGGHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehhh-hhHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999998 4444466799999999999 56789999984 999999999999999999
Q ss_pred CC--CCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeecc
Q 016389 264 NW--NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNK 308 (390)
Q Consensus 264 ~~--~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~ 308 (390)
++ ++++|||++|+.-. ..+. +-..=|-||.|+|++.+
T Consensus 134 ~~~~g~~aLVVasDiA~y--~~g~------~e~TqGAGAVAmLi~~n 172 (174)
T PF01154_consen 134 SPWDGRKALVVASDIARY--DLGS------AEPTQGAGAVAMLIGPN 172 (174)
T ss_dssp TTSTTEEEEEEEEEEE----STTT------TGGG-EEEEEEEEEECS
T ss_pred CCCCCCeEEEEecccccc--CCCC------ccccccceeEEEEecCC
Confidence 75 68999999998732 1121 12345889999999865
No 39
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.67 E-value=1.7e-15 Score=148.86 Aligned_cols=117 Identities=15% Similarity=0.229 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhc
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a 263 (390)
...+|+.+|+++||+++|++++|||.+|+.+... .|..+..++++||++ .|++++ +|++++.||.+|..++++
T Consensus 49 Ae~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~--Q~~~As~vA~~LGIP----~fdV~~-ACSTf~~AL~lAa~lI~S 121 (327)
T TIGR02845 49 AERKLMEDAVNLALKKANLKKDDVDFFLAGDLLN--QIITANFVARDLGIP----FLGLYG-ACSTSMETLALGAMLVDG 121 (327)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCC--cccHHHHHHHHhCCC----EEEEec-cCHHHHHHHHHHHHHHhC
Confidence 4478999999999999999999999999887544 345788999999973 499986 999999999999999999
Q ss_pred CCCCeEEEEEeccCC------cCc-ccCC-CcccccccccccCCceEEEeecccc
Q 016389 264 NWNTYAVVVSTENIT------QNW-YFGN-KKSMLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 264 ~~~~~aLVVstE~~S------~~~-~~~~-drs~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
+..++||||++|..| +.. .+++ ++. +..+|+|||+|+||++.+.
T Consensus 122 G~ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~---ta~~tgdGAGA~vl~~~~~ 173 (327)
T TIGR02845 122 GFADRVLAATSSHYATAERQFRYPTEYGVQKPP---TAQWTVTGAGAVLLASTGG 173 (327)
T ss_pred CCCCEEEEEEecccchhhhhcccccccccCCCC---eeeEEEcccEEEEEeecCC
Confidence 999999999988877 222 3332 343 4789999999999998653
No 40
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.61 E-value=5.5e-15 Score=145.18 Aligned_cols=123 Identities=15% Similarity=0.214 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHcCCCC----CCCcCEEEEeecCCCC----------------------CCCHHHHHHHHcCCCCCce
Q 016389 185 AEQVMYGALDNLFSNTNVN----PKDIGILVVNCSLFNP----------------------TPSLSAMIVNKYRLRGNIR 238 (390)
Q Consensus 185 a~~la~~Aa~~aL~kagi~----p~dId~LIv~~s~~~~----------------------~Psla~~I~~~LgLr~~v~ 238 (390)
..+|+.+|++++|+++|++ ++|||.||+.++.... .|+.+.+|++.+|++ ..
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--g~ 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH--GP 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCC--CC
Confidence 5789999999999999999 9999999988765432 788999999999994 56
Q ss_pred eEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcCcccC--------------CCcccccccccccCCceEEE
Q 016389 239 SYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFG--------------NKKSMLIPNCLFRVGCSAVL 304 (390)
Q Consensus 239 ~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~~~~~--------------~drs~lv~~~LFgDGAAAvL 304 (390)
+++++ .||++++.||++|.+++++++.+++||+++|..+..+... ..-+.....++|||||+|+|
T Consensus 89 ~~~v~-~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 AYDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred ccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 78888 6999999999999999999999999999999877654320 00012235789999999999
Q ss_pred eecccc
Q 016389 305 LSNKRK 310 (390)
Q Consensus 305 Ls~~~~ 310 (390)
|++.+.
T Consensus 168 L~~~~~ 173 (332)
T cd00825 168 VEELEH 173 (332)
T ss_pred ECcHHH
Confidence 997654
No 41
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.53 E-value=2.5e-13 Score=133.89 Aligned_cols=117 Identities=18% Similarity=0.274 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcC
Q 016389 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (390)
Q Consensus 185 a~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~ 264 (390)
-.+|+.+|+++||+++|++++|||.+|+.+...+ |..+..++++||+ ..+++.+ +|+++..||.+|..+++++
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGI----Pa~dV~g-ACST~~~AL~lAa~lI~SG 128 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGI----PFLGLYG-ACSTMMESLALGSMLIDGG 128 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCC----cEEEEec-cCHHHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999998876444 4678899999986 5799986 9999999999999999999
Q ss_pred CCCeEEEEEeccCCcC---ccc----CCCcccccccccccCCceEEEeecccc
Q 016389 265 WNTYAVVVSTENITQN---WYF----GNKKSMLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 265 ~~~~aLVVstE~~S~~---~~~----~~drs~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
..++||||++|..|.. |++ |+.|. .+...++|||+|+||++...
T Consensus 129 ~ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp--~taqwtvtGAGA~i~~~~~~ 179 (337)
T PRK08304 129 FADRVLAATSSHFATAERQFRFPTEYGGQRP--PTAQWTVTGAGAVLLSREGS 179 (337)
T ss_pred CCCEEEEEEcchhhhhhhhccCchhccccCC--CcceEEeeccEEEEEecCCC
Confidence 8999999999987764 543 22222 25789999999999997653
No 42
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.43 E-value=1.1e-12 Score=131.47 Aligned_cols=180 Identities=12% Similarity=0.110 Sum_probs=125.5
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhc-CCCCcch-HHH--HHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHH
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLT-GDFDESS-LEF--QRKILERSGLGEETYFPEAMHAIPPKPSMAAAREE 184 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~-~~~~~~~-~~~--~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~ee 184 (390)
++|||++.|+.-|=- .+.++....+... .++.... .+- -+||..++|+.+|++.. .+.
T Consensus 3 ~~v~I~~~g~vs~lG---~~~~~~~aa~ragi~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---------------~~r 64 (348)
T PRK06147 3 RALAIVGSGMVTAVG---LDAPSSCAAIRARLDNFQETRFIDPPGGEWLIGAPVPLPPPWRG---------------PER 64 (348)
T ss_pred CceEEEecceeecCc---CCHHHHHHHHHcccccccccccccCCCCCceEeecCcCCcccCc---------------hHH
Confidence 469999999999963 2333333333211 1111100 000 13455566665555421 256
Q ss_pred HHHHHHHHHHHHHHcCC-CCCCCcCEEEEeec------CCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHH
Q 016389 185 AEQVMYGALDNLFSNTN-VNPKDIGILVVNCS------LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLA 257 (390)
Q Consensus 185 a~~la~~Aa~~aL~kag-i~p~dId~LIv~~s------~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA 257 (390)
..+|+..|++++|++++ +++++||++|+.++ +....|.+...+++++|++....+++++. ||++++.||..|
T Consensus 65 ~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~-~casg~~Al~~A 143 (348)
T PRK06147 65 LAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIAR-GRVSGAVALAQA 143 (348)
T ss_pred HHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccc-cchHHHHHHHHH
Confidence 78999999999999999 89999999998654 12223456788999999965567799985 999999999999
Q ss_pred HHHHhcCCCCeEEEEEeccCCcC--ccc--------CCCcccccccccccCCceEEEeecccc
Q 016389 258 KDLLQVNWNTYAVVVSTENITQN--WYF--------GNKKSMLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 258 ~~lL~a~~~~~aLVVstE~~S~~--~~~--------~~drs~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
.++|+.+..+.+||+++|.++.. +.. .+++. ...+|||||++++|++.+.
T Consensus 144 ~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~---~G~v~GEGA~a~vLe~~~~ 203 (348)
T PRK06147 144 RRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNS---NGFIPGEAAAAVLLGRPAG 203 (348)
T ss_pred HHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCC---CceeeeceEEEEEEccHhh
Confidence 99999999999999999987652 111 01111 3679999999999997654
No 43
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.32 E-value=1.8e-12 Score=103.18 Aligned_cols=74 Identities=19% Similarity=0.370 Sum_probs=59.2
Q ss_pred EecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccccccccceeE
Q 016389 240 YNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRL 319 (390)
Q Consensus 240 ~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~~~~~~~y~L 319 (390)
||++ ++|+|++.||++|+.+++++..++||||++|..+..+++.+ +. ...+|||||+|+||++.+. ..+++
T Consensus 1 fDi~-~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~~~~~~-~~---~~~~~gDgAaA~vl~~~~~----~~~~i 71 (80)
T PF08545_consen 1 FDIN-QACAGFLYALDVAAALIASGRAKNALVVGGDRLSRIVDRTD-RQ---TAFIFGDGAAAVVLSRDEE----GGFGI 71 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGGSHTTH-HH---HHTTB-EEEEEEEEEEESS----SSCEE
T ss_pred Cccc-ccchHHHHHHHHHHHHHhhccCCEEEEEeeccccccccccc-cC---cceeecchheEEEEEecCC----CCCeE
Confidence 7888 59999999999999999999889999999999998666543 32 3568999999999998742 25777
Q ss_pred EeE
Q 016389 320 VHI 322 (390)
Q Consensus 320 ~~~ 322 (390)
+.+
T Consensus 72 l~~ 74 (80)
T PF08545_consen 72 LDS 74 (80)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 44
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.28 E-value=3.8e-11 Score=121.55 Aligned_cols=185 Identities=14% Similarity=0.240 Sum_probs=118.8
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcC-CCCcchHHHHHHHHHHcCCCcee--eecCCC--cCCCCCcchHHHHH
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTG-DFDESSLEFQRKILERSGLGEET--YFPEAM--HAIPPKPSMAAARE 183 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~-~~~~~~~~~~~rI~~rsGI~~R~--~~p~~~--~~~pp~~~~~~~~e 183 (390)
++|+|+|+|+..|.. .+.+++++.+.... .+.+-. + .+..+...+. .++... +..|+. ......
T Consensus 1 ~~i~I~G~g~~~p~g---~~~~~~~~~l~~g~~~~~~~~-----~-~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~ 69 (406)
T cd00834 1 RRVVITGLGAVTPLG---NGVEEFWEALLAGRSGIRPIT-----R-FDASGFPSRIAGEVPDFDPEDYLDRK--ELRRMD 69 (406)
T ss_pred CcEEEECcceeCCCc---CCHHHHHHHHHcCCCeeEECC-----c-ccccCCCccEEEEcCCCChhhcCCHH--HhccCC
Confidence 379999999999973 47788888765311 011000 0 0011111111 112111 112221 111124
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCE----EEEeecCC---------------------------CCCCCHHHHHHHHcC
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGI----LVVNCSLF---------------------------NPTPSLSAMIVNKYR 232 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~----LIv~~s~~---------------------------~~~Psla~~I~~~Lg 232 (390)
...+|+..|++++|+++|+++++||. +++.++.+ ...+..+.+|+..||
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 56789999999999999999876654 44443321 123557889999999
Q ss_pred CCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCc----------------------CcccCCCcccc
Q 016389 233 LRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQ----------------------NWYFGNKKSML 290 (390)
Q Consensus 233 Lr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~----------------------~~~~~~drs~l 290 (390)
++. .++.+. .||++++.||..|.++|+.+..++|||+++|..+. ...+-+.+.
T Consensus 150 l~g--~~~~v~-~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~-- 224 (406)
T cd00834 150 LRG--PNYTVS-TACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDR-- 224 (406)
T ss_pred CCC--cccccc-hHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCC--
Confidence 964 567777 49999999999999999999999999999998761 011111111
Q ss_pred cccccccCCceEEEeecccc
Q 016389 291 IPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 291 v~~~LFgDGAAAvLLs~~~~ 310 (390)
..+++||||+|+||++.+.
T Consensus 225 -~g~~~geGA~a~vL~~~~~ 243 (406)
T cd00834 225 -DGFVLGEGAGVLVLESLEH 243 (406)
T ss_pred -CCEeeeccEEEEEEecHHH
Confidence 2578999999999997653
No 45
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.20 E-value=5e-11 Score=121.08 Aligned_cols=96 Identities=14% Similarity=0.211 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL 261 (390)
+...+|+.+|++++|+++|++++|||.+|+.++. +...|..+..+++++|++.++.+++++ +||++++.+|.+|.+++
T Consensus 20 ~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~-~~c~s~~~al~~A~~~I 98 (386)
T cd00751 20 VSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVN-RVCGSGLQAVALAAQSI 98 (386)
T ss_pred CCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhc-cccHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999987653 445788888899999998657889998 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCCc
Q 016389 262 QVNWNTYAVVVSTENITQ 279 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~S~ 279 (390)
+++..++|||++.|.+|.
T Consensus 99 ~sG~~~~vLv~g~e~~s~ 116 (386)
T cd00751 99 AAGEADVVVAGGVESMSR 116 (386)
T ss_pred HCCCCCeEEEeeeecccc
Confidence 999999999999997653
No 46
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.18 E-value=9.9e-10 Score=108.17 Aligned_cols=118 Identities=16% Similarity=0.265 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHh
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
+.-.+|+.+|+++||+++|++++|||.+++.+.+.+.+|+. .++++||++ .+++.+ +||++..||.+|..+++
T Consensus 52 kAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ipss--fvar~LGIP----~~gV~g-ACSTg~eAL~lAa~~Va 124 (334)
T PRK12404 52 KAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPTS--FAARTLGIP----YLGLFG-ACSTSMEGLALAALIVN 124 (334)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcHH--HHHHHhCCC----ccceee-cCHHHHHHHHHHHHHHH
Confidence 34467999999999999999999999999998887777775 889999954 388886 99999999999999999
Q ss_pred cCCCCeEEEEEec-cCC--cCccc----CCCcccccccccccCCceEEEeeccc
Q 016389 263 VNWNTYAVVVSTE-NIT--QNWYF----GNKKSMLIPNCLFRVGCSAVLLSNKR 309 (390)
Q Consensus 263 a~~~~~aLVVstE-~~S--~~~~~----~~drs~lv~~~LFgDGAAAvLLs~~~ 309 (390)
++..++||++++- ++| +.|++ ++.|. .+.-.---|++|+||+++.
T Consensus 125 SG~Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp--~taqwTvTgaga~~l~~~~ 176 (334)
T PRK12404 125 SGGAKYVLTGASSHNAAVEKQFRYPTEYGGQKP--PTAQWTVTGAGAAILSKTG 176 (334)
T ss_pred cCCCCEEEEEeCcccchhhhhccCcccccCcCC--CcccEEEEceEEEEEecCC
Confidence 9999999999764 333 23433 22222 1334446789999998764
No 47
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.13 E-value=4.3e-10 Score=114.88 Aligned_cols=125 Identities=14% Similarity=0.152 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcC----EEEEeecC-CC-------------------CCCCHHHHHHHHcCCCCCce
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIG----ILVVNCSL-FN-------------------PTPSLSAMIVNKYRLRGNIR 238 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId----~LIv~~s~-~~-------------------~~Psla~~I~~~LgLr~~v~ 238 (390)
.....|+..|++++|+++|+++++|| .+|+.++. ++ ..+..+..|..++|++. .
T Consensus 85 ~~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~g--~ 162 (424)
T smart00825 85 DPQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRG--P 162 (424)
T ss_pred CHHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCCC--C
Confidence 34567999999999999999999998 67766542 11 14557788999999975 5
Q ss_pred eEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcC-----------cccCC-C--cccccccccccCCceEEE
Q 016389 239 SYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQN-----------WYFGN-K--KSMLIPNCLFRVGCSAVL 304 (390)
Q Consensus 239 ~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~-----------~~~~~-d--rs~lv~~~LFgDGAAAvL 304 (390)
.+.++. +|++++.||..|.++++++..+++||+++|..+.. ..... . -+..-..+++||||+|+|
T Consensus 163 ~~~v~~-acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaalV 241 (424)
T smart00825 163 SVTVDT-ACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVVV 241 (424)
T ss_pred cccccc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEEEE
Confidence 677874 99999999999999999999999999999964321 00000 0 000113578999999999
Q ss_pred eecccc
Q 016389 305 LSNKRK 310 (390)
Q Consensus 305 Ls~~~~ 310 (390)
|+..+.
T Consensus 242 Le~~e~ 247 (424)
T smart00825 242 LKRLSD 247 (424)
T ss_pred EccHHH
Confidence 997543
No 48
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.11 E-value=2.6e-10 Score=116.02 Aligned_cols=96 Identities=18% Similarity=0.268 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL 261 (390)
+...+|+.+|+++||+++|++++|||.+|+.+.+ ....|..+..++.++|++.++.+++++ .+|++++.++.+|.+++
T Consensus 19 ~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~I 97 (386)
T TIGR01930 19 VSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN-RQCASGLQAVILAAQLI 97 (386)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec-chhhHHHHHHHHHHHHH
Confidence 4568999999999999999999999999987653 444577788899999998668899998 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCCc
Q 016389 262 QVNWNTYAVVVSTENITQ 279 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~S~ 279 (390)
+++..+++||++.|.+|.
T Consensus 98 ~sG~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 98 RAGEADVVVAGGVESMSR 115 (386)
T ss_pred HCCCCCEEEEEEehhhcc
Confidence 999999999999998654
No 49
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.09 E-value=3.6e-10 Score=115.30 Aligned_cols=96 Identities=14% Similarity=0.204 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCC-HHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPS-LSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Ps-la~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~l 260 (390)
+.+.+|+.+|++++|+++|++|+|||.+|+.++. +...|+ .+..+..++|++.++.+++++ ++|++|+.|+.+|.++
T Consensus 25 ~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~-~aCaSg~~Al~~A~~~ 103 (392)
T PRK07108 25 THGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVN-RFCSSGLQTIALAAQR 103 (392)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHH
Confidence 4568999999999999999999999999988754 444455 888999999998779999998 5999999999999999
Q ss_pred HhcCCCCeEEEEEeccCCc
Q 016389 261 LQVNWNTYAVVVSTENITQ 279 (390)
Q Consensus 261 L~a~~~~~aLVVstE~~S~ 279 (390)
++++..+.+|+++.|.+|.
T Consensus 104 I~sG~~d~vlagGvE~ms~ 122 (392)
T PRK07108 104 VIAGEGDVFVAGGVESISC 122 (392)
T ss_pred HHCCCCCEEEEEEEeccCC
Confidence 9999999999999999885
No 50
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.07 E-value=5.3e-10 Score=114.06 Aligned_cols=96 Identities=16% Similarity=0.221 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL 261 (390)
+...+|+.+|++++|+++|++|+|||.+|+.|+. ....|..+..++.++|++..+.+++++ .+|++|+.++.+|.+++
T Consensus 24 ~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~-~~Casg~~ai~~A~~~I 102 (393)
T PRK05656 24 IPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLN-KVCGSGLKALHLAAQAI 102 (393)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEec-ccchhHHHHHHHHHHHH
Confidence 3468999999999999999999999999988764 223567788899999998668899998 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCCc
Q 016389 262 QVNWNTYAVVVSTENITQ 279 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~S~ 279 (390)
+++..+++||+++|.+|.
T Consensus 103 ~sG~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 103 RCGDAEVIIAGGQENMSL 120 (393)
T ss_pred HcCCCCEEEEEEEhhhcc
Confidence 999999999999998775
No 51
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.03 E-value=5.7e-09 Score=106.10 Aligned_cols=121 Identities=17% Similarity=0.193 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCE----EEEeecCC--------------------CCCCCHHHHHHHHcCCCCCcee
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGI----LVVNCSLF--------------------NPTPSLSAMIVNKYRLRGNIRS 239 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~----LIv~~s~~--------------------~~~Psla~~I~~~LgLr~~v~~ 239 (390)
....|+..|++++|+++|+++++++. +++.++.. ...+..+..|..++|++. .+
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~g--~~ 163 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRG--PS 163 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCCC--Cc
Confidence 45789999999999999999888774 55544311 112457788999999975 56
Q ss_pred EecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcC-----------------cccCCCcccccccccccCCceE
Q 016389 240 YNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQN-----------------WYFGNKKSMLIPNCLFRVGCSA 302 (390)
Q Consensus 240 ~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~-----------------~~~~~drs~lv~~~LFgDGAAA 302 (390)
+.+.+ +|++++.||..|.++++++..+.+||+++|..+.. .++-+.+ -...++||||+|
T Consensus 164 ~~v~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~---~~g~~~geGAaa 239 (421)
T cd00833 164 LTVDT-ACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDAD---ADGYVRGEGVGV 239 (421)
T ss_pred eeecc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCC---CCCeeeeceEEE
Confidence 77774 99999999999999999999999999999975310 1111111 125789999999
Q ss_pred EEeecccc
Q 016389 303 VLLSNKRK 310 (390)
Q Consensus 303 vLLs~~~~ 310 (390)
+||+..+.
T Consensus 240 lvL~~~~~ 247 (421)
T cd00833 240 VVLKRLSD 247 (421)
T ss_pred EEEeeHHH
Confidence 99997654
No 52
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.02 E-value=1e-09 Score=112.27 Aligned_cols=96 Identities=17% Similarity=0.228 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL 261 (390)
+...+|+.+|++++|+++|++|+|||.+|+.|+. ....|.++.+++.++|++.++.+++++ .+|++|+.++..|.+++
T Consensus 24 ~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I 102 (404)
T PRK06205 24 VPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLD-RRCGSGLQAVITAAMQV 102 (404)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehh-hhhhHHHHHHHHHHHHH
Confidence 3468999999999999999999999999988764 455688888899999998778899998 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCCc
Q 016389 262 QVNWNTYAVVVSTENITQ 279 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~S~ 279 (390)
+++..+.+||++.|.+|.
T Consensus 103 ~sG~~d~vLv~G~E~ms~ 120 (404)
T PRK06205 103 QTGAADVVIAGGAESMSN 120 (404)
T ss_pred HcCCCCEEEEeeehhhcc
Confidence 999999999999998874
No 53
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.02 E-value=1.2e-09 Score=111.42 Aligned_cols=96 Identities=16% Similarity=0.204 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCC-CCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLF-NPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~-~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL 261 (390)
+...+|+.+|++++|+++|++|+|||.+|+.|... ...+..+..++..+|++.++.+++++ .+|++|+.|+..|.+++
T Consensus 24 ~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I 102 (393)
T PRK08235 24 VKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVN-KVCASGLRAVTLADQII 102 (393)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHH
Confidence 35689999999999999999999999999887642 12345556778999998779999998 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCCc
Q 016389 262 QVNWNTYAVVVSTENITQ 279 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~S~ 279 (390)
+++..+++||+++|.+|.
T Consensus 103 ~sG~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 103 RAGDASVIVAGGMESMSN 120 (393)
T ss_pred HCCCCCEEEEEeeecccc
Confidence 999999999999998875
No 54
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.00 E-value=1.8e-09 Score=110.44 Aligned_cols=96 Identities=16% Similarity=0.310 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCC-CCC-CCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLF-NPT-PSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~-~~~-Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL 261 (390)
.+.+|+.+|++++|+++|++|+|||.+|+.|+.. ... +..+.......|++.++.+++++ ++|++|+.||.+|.+++
T Consensus 27 ~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn-~aCaSg~~Ai~~A~~~I 105 (402)
T PRK08242 27 KPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQIN-RFCASGLEAVNLAAAKV 105 (402)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEc-chhhhHHHHHHHHHHHH
Confidence 5689999999999999999999999999987642 222 34556666888998779999998 69999999999999999
Q ss_pred hcCCCCeEEEEEeccCCcC
Q 016389 262 QVNWNTYAVVVSTENITQN 280 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~S~~ 280 (390)
+++..+++|++++|.+|..
T Consensus 106 ~sG~~d~vLv~G~E~mS~~ 124 (402)
T PRK08242 106 RSGWDDLVIAGGVESMSRV 124 (402)
T ss_pred HcCCCCEEEEEEEEccCCC
Confidence 9999999999999999864
No 55
>PRK06059 lipid-transfer protein; Provisional
Probab=98.99 E-value=1.6e-09 Score=110.60 Aligned_cols=93 Identities=13% Similarity=0.123 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC--CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHh
Q 016389 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSL--FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 185 a~~la~~Aa~~aL~kagi~p~dId~LIv~~s~--~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
..+|+.+|++++|+++|++++|||.||+.++. .+..|..+..|++++|++ ++..+++++ +|++++.+|..|.++++
T Consensus 23 ~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~~-~Casg~~al~~A~~~I~ 100 (399)
T PRK06059 23 FVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSYA-ACASGSQALQSARAQIL 100 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceecccc-hhHHHHHHHHHHHHHHH
Confidence 48899999999999999999999999977653 233456678999999997 477899984 99999999999999999
Q ss_pred cCCCCeEEEEEeccCCc
Q 016389 263 VNWNTYAVVVSTENITQ 279 (390)
Q Consensus 263 a~~~~~aLVVstE~~S~ 279 (390)
++..++||||++|..|.
T Consensus 101 sG~~~~vLvvg~e~~s~ 117 (399)
T PRK06059 101 AGLCDVALVVGADTTPK 117 (399)
T ss_pred CCCCCEEEEEEEcccCC
Confidence 99999999999998764
No 56
>PRK09051 beta-ketothiolase; Provisional
Probab=98.99 E-value=1.5e-09 Score=110.77 Aligned_cols=96 Identities=15% Similarity=0.234 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCC-CHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTP-SLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~P-sla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~l 260 (390)
+...+|+.+|++++|+++|++|+|||.+|+.|+. ....| ..+..+...+|+++++.+++++ .+|++|+.|+.+|.++
T Consensus 25 ~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~ 103 (394)
T PRK09051 25 VAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVN-RLCGSGLQAIVSAAQA 103 (394)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEec-ccchHHHHHHHHHHHH
Confidence 3568999999999999999999999999988765 33333 4555566777998678999998 5999999999999999
Q ss_pred HhcCCCCeEEEEEeccCCc
Q 016389 261 LQVNWNTYAVVVSTENITQ 279 (390)
Q Consensus 261 L~a~~~~~aLVVstE~~S~ 279 (390)
++++..++|||++.|.+|.
T Consensus 104 I~sG~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 104 ILLGDADVAIGGGAESMSR 122 (394)
T ss_pred HHcCCCCEEEEEeehhccc
Confidence 9999999999999998774
No 57
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=98.97 E-value=2.5e-09 Score=109.34 Aligned_cols=95 Identities=18% Similarity=0.259 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHHcC-CCCCCCcCEEEEeecC-CCCCCCHHHHHHH-HcCCCCCceeEecCCccchhHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNT-NVNPKDIGILVVNCSL-FNPTPSLSAMIVN-KYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260 (390)
Q Consensus 184 ea~~la~~Aa~~aL~ka-gi~p~dId~LIv~~s~-~~~~Psla~~I~~-~LgLr~~v~~~dl~gmGCsggl~aL~lA~~l 260 (390)
...+|+.+|++++|+++ |++|+|||.+|+.|+. +...|....+++. .+|++..+.+++++ .+|++|+.|+..|.++
T Consensus 30 s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~ 108 (399)
T PRK09052 30 RPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVN-RFCASGLQAVAMAADR 108 (399)
T ss_pred CHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHH
Confidence 46899999999999997 9999999999998754 4445666666554 45998568899998 5999999999999999
Q ss_pred HhcCCCCeEEEEEeccCCc
Q 016389 261 LQVNWNTYAVVVSTENITQ 279 (390)
Q Consensus 261 L~a~~~~~aLVVstE~~S~ 279 (390)
++++..+++||++.|.+|.
T Consensus 109 I~sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 109 IRVGEADVMIAAGVESMSM 127 (399)
T ss_pred HHCCCCCEEEEEEEecccc
Confidence 9999999999999998774
No 58
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=98.95 E-value=2.5e-09 Score=108.61 Aligned_cols=94 Identities=15% Similarity=0.282 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCC-CCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHh
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLF-NPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~-~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
...+|+.+|++++|+++|++++|||.+|+.++.. ...+..+..+++.+|++. ...++++ ++|++++.+|.+|.++++
T Consensus 20 ~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~-~~~~~v~-~~casg~~al~~A~~~I~ 97 (385)
T PRK12578 20 SVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTG-KVPLRVE-AMCATGLAASLTAYTAVA 97 (385)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCCC-CCeeEEe-ccCHHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999887542 112334778999999985 5669997 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCc
Q 016389 263 VNWNTYAVVVSTENITQ 279 (390)
Q Consensus 263 a~~~~~aLVVstE~~S~ 279 (390)
++..++||||++|.+|.
T Consensus 98 sG~~~~vLvvg~e~~s~ 114 (385)
T PRK12578 98 SGLVDMAIAVGVDKMTE 114 (385)
T ss_pred CCCCCEEEEEEEeeccc
Confidence 99999999999998653
No 59
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=98.93 E-value=4.4e-09 Score=108.46 Aligned_cols=95 Identities=13% Similarity=0.309 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHh
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
...+|+.+|++++|+++|++++|||.+|+.|+. ....|..+.+++..+|++.++.+++++ .+|++++.++..|.++++
T Consensus 26 ~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~-~~CaSg~~al~~A~~~I~ 104 (426)
T PRK08170 26 SASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQ-RNCASGMQALDSAAANIA 104 (426)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeecc-chhhHHHHHHHHHHHHHH
Confidence 458999999999999999999999999987654 223467788899999997678899998 489999999999999999
Q ss_pred cCCCCeEEEEEeccCCc
Q 016389 263 VNWNTYAVVVSTENITQ 279 (390)
Q Consensus 263 a~~~~~aLVVstE~~S~ 279 (390)
++..+++||+++|.+|.
T Consensus 105 sG~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 105 LGRADLVLAGGVEAMSH 121 (426)
T ss_pred CCCCCEEEEEEEecccC
Confidence 99999999999998775
No 60
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.92 E-value=7.6e-08 Score=99.17 Aligned_cols=182 Identities=13% Similarity=0.153 Sum_probs=111.9
Q ss_pred CeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHHHH
Q 016389 110 PVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVM 189 (390)
Q Consensus 110 ~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~la 189 (390)
+|.|.|+|+-.|-- .+.+++.+.+..-. ..++...+ +...++..+...... ..++..... ......++
T Consensus 12 ~VvITG~G~vs~~G---~~~~~~~~~L~~G~----s~i~~~~~-~~~~~~~~~~~g~~~--~~~~~~~~~--~~~~~~~~ 79 (425)
T PRK06501 12 IVAVTGMGVVTSLG---QGKADNWAALTAGE----SGIHTITR-FPTEGLRTRIAGTVD--FLPESPFGA--SALSEALA 79 (425)
T ss_pred CEEEEeeeEECCCC---CCHHHHHHHHHcCC----CceEcCCc-ccccCCCCceEEEEe--ecccccccc--cCHHHHHH
Confidence 69999999999963 47788888776321 00000000 001111111110000 111111101 11245688
Q ss_pred HHHHHHHHHcCCCCCCCcC------------------EEEEeec----------------CCC-------CCCCHHHHHH
Q 016389 190 YGALDNLFSNTNVNPKDIG------------------ILVVNCS----------------LFN-------PTPSLSAMIV 228 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId------------------~LIv~~s----------------~~~-------~~Psla~~I~ 228 (390)
..|++++|+++|+++.+.+ .++..+. ... ..|+.+..|+
T Consensus 80 ~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~ 159 (425)
T PRK06501 80 RLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIADRLA 159 (425)
T ss_pred HHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHHHHH
Confidence 9999999999999654422 1111111 011 3567899999
Q ss_pred HHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEecc---------------CCcCcc-------cC-C
Q 016389 229 NKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTEN---------------ITQNWY-------FG-N 285 (390)
Q Consensus 229 ~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~---------------~S~~~~-------~~-~ 285 (390)
.++|++. .+++++. +|++++.||..|.++++.+..+++||+++|. +|...+ +- .
T Consensus 160 ~~~gl~G--~~~~i~~-aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~ 236 (425)
T PRK06501 160 DRFGTRG--LPISLST-ACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSK 236 (425)
T ss_pred HHhCCCC--CceeecC-ccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCCCC
Confidence 9999974 4588875 8999999999999999999999999999993 221111 10 1
Q ss_pred CcccccccccccCCceEEEeecccc
Q 016389 286 KKSMLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 286 drs~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
+++ ..++||||+|+||+..+.
T Consensus 237 ~r~----G~v~GEGaaalVLe~~~~ 257 (425)
T PRK06501 237 DRD----GFVMAEGAGALVLESLES 257 (425)
T ss_pred CCC----CeeeeccEEEEEECcHHH
Confidence 232 578999999999997653
No 61
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=98.91 E-value=3.8e-09 Score=107.54 Aligned_cols=91 Identities=15% Similarity=0.122 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCC----CCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFN----PTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKD 259 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~----~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~ 259 (390)
+..+|+.+|++++|+++|++++|||.+|+.++.+. ..|+ ..|+++||++ +..++++++ +|++|..++..|.+
T Consensus 23 s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~--~~va~~LGl~-~~~~~~v~~-~casg~~al~~A~~ 98 (386)
T PRK08313 23 SMAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPE--LFLADALGAT-GKPLIRVHT-AGSVGGSTAVVAAS 98 (386)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCch--HHHHHhcCCC-CCceEEEec-cCHHHHHHHHHHHH
Confidence 45889999999999999999999999998764322 2344 6899999997 567899975 99999999999999
Q ss_pred HHhcCCCCeEEEEEeccCC
Q 016389 260 LLQVNWNTYAVVVSTENIT 278 (390)
Q Consensus 260 lL~a~~~~~aLVVstE~~S 278 (390)
+++++..++||||++|..+
T Consensus 99 ~I~sG~~~~vLVvg~e~~s 117 (386)
T PRK08313 99 LVQSGVYRRVLAVAWEKQS 117 (386)
T ss_pred HHHCCCCCEEEEEEEEEcc
Confidence 9999999999999999764
No 62
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=98.90 E-value=4.4e-09 Score=105.91 Aligned_cols=95 Identities=17% Similarity=0.178 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL 261 (390)
.+..+|+.+|++++|+++|++++|||.+|+.++. ....|..+.++++++|++ ++..++++ .+|++++.++..|.+++
T Consensus 14 ~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~~c~sg~~al~~Aa~~I 91 (375)
T cd00829 14 RSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVE-AAGASGSAAVRAAAAAI 91 (375)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEe-CccHHHHHHHHHHHHHH
Confidence 4568999999999999999999999999987653 333577889999999997 78889997 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCCc
Q 016389 262 QVNWNTYAVVVSTENITQ 279 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~S~ 279 (390)
+++..+.|||+++|..|.
T Consensus 92 ~sG~~~~vlv~g~e~~s~ 109 (375)
T cd00829 92 ASGLADVVLVVGAEKMSD 109 (375)
T ss_pred HhCCCCEEEEEEEeeccc
Confidence 999999999999998764
No 63
>PRK05790 putative acyltransferase; Provisional
Probab=98.87 E-value=8.2e-09 Score=105.17 Aligned_cols=95 Identities=15% Similarity=0.178 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCC-CCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLF-NPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~-~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL 261 (390)
+...+|+.+|++++|+++|++|+|||.+|+.++.. ...|..+..++..+|++.++.+++++ .+|++++.+|..|.+++
T Consensus 24 ~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~-~~Casg~~al~~A~~~I 102 (393)
T PRK05790 24 VSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTIN-KVCGSGLKAVALAAQAI 102 (393)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeec-ccchHHHHHHHHHHHHH
Confidence 35689999999999999999999999999876432 12344555577788997667889998 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCC
Q 016389 262 QVNWNTYAVVVSTENIT 278 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~S 278 (390)
+++..+++||++.|..|
T Consensus 103 ~sG~~d~vLv~G~e~~s 119 (393)
T PRK05790 103 RAGDADIVVAGGQESMS 119 (393)
T ss_pred HcCCCCEEEEEeeeccc
Confidence 99999999999999754
No 64
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=98.84 E-value=1.2e-08 Score=104.35 Aligned_cols=94 Identities=19% Similarity=0.222 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHh
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
...+|+.+|++++|+++|++|+|||.+|+.++. ....+.........+|++.++.+++++ ++|++|+.|+..|.++++
T Consensus 30 ~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~-~aCaSG~~Av~~A~~~I~ 108 (397)
T PRK06954 30 TAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVN-KMCGSGMRAAMFAHDMLV 108 (397)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeecc-ccchHHHHHHHHHHHHHH
Confidence 468999999999999999999999999988754 222233333344556777678999998 599999999999999999
Q ss_pred cCCCCeEEEEEeccCC
Q 016389 263 VNWNTYAVVVSTENIT 278 (390)
Q Consensus 263 a~~~~~aLVVstE~~S 278 (390)
++..+++||++.|.+|
T Consensus 109 sG~~d~vLv~G~E~ms 124 (397)
T PRK06954 109 AGSVDVIVAGGMESMT 124 (397)
T ss_pred CCCCCEEEEEeeeccC
Confidence 9999999999999887
No 65
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=98.84 E-value=4.3e-08 Score=99.73 Aligned_cols=122 Identities=12% Similarity=0.091 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCC-cC----EEEEeecCC-----------------------CCC--CCHHHHHHHHcC
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKD-IG----ILVVNCSLF-----------------------NPT--PSLSAMIVNKYR 232 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~d-Id----~LIv~~s~~-----------------------~~~--Psla~~I~~~Lg 232 (390)
+....++..|++++|+++|+++++ ++ .+++.++.. ... ...+..|...+|
T Consensus 70 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (407)
T cd00828 70 DRTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLL 149 (407)
T ss_pred CHHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhC
Confidence 346789999999999999998765 33 233333211 111 457788999999
Q ss_pred C-CCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCc---------------------CcccCCCcccc
Q 016389 233 L-RGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQ---------------------NWYFGNKKSML 290 (390)
Q Consensus 233 L-r~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~---------------------~~~~~~drs~l 290 (390)
+ +. ..+.+.+ +|++++.||..|.++++.+..+.+||.++|..+. ..++-+.+
T Consensus 150 l~~G--p~~tv~~-aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~--- 223 (407)
T cd00828 150 SSHG--PIKTPVG-ACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDET--- 223 (407)
T ss_pred cCCC--CCcCccc-HHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCC---
Confidence 9 64 4566764 9999999999999999999999999999998651 01111111
Q ss_pred cccccccCCceEEEeecccc
Q 016389 291 IPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 291 v~~~LFgDGAAAvLLs~~~~ 310 (390)
-..+++||||+|+||++.+.
T Consensus 224 ~~G~~~gEGAaalvLe~~~~ 243 (407)
T cd00828 224 RDGFVEAEGAGVLVLERAEL 243 (407)
T ss_pred CCcEEeecceEEEEEeeHHH
Confidence 12578999999999998654
No 66
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=98.83 E-value=1.7e-08 Score=103.04 Aligned_cols=95 Identities=13% Similarity=0.110 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHH-HHHHcCCCCCceeEecCCccchhHHHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAM-IVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~-I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~l 260 (390)
+.+.+++.+|++++|+++|++|+|||.+|+.++. +...|..+.. +++.+|+. ++.+++++ .+|++|+.++..|.++
T Consensus 21 ~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~-~~Casg~~al~~A~~~ 98 (393)
T cd00826 21 DLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMN-NLCGSGLRALALAMQL 98 (393)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEec-chhHHHHHHHHHHHHH
Confidence 4578999999999999999999999999988764 3323555553 66778876 68999998 4999999999999999
Q ss_pred HhcCCCCeEEEEEeccCCc
Q 016389 261 LQVNWNTYAVVVSTENITQ 279 (390)
Q Consensus 261 L~a~~~~~aLVVstE~~S~ 279 (390)
++++..+++||+++|.+|.
T Consensus 99 I~sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 99 IAGGDANCILAGGFEKMET 117 (393)
T ss_pred HHCCCCCEEEEEeeecccc
Confidence 9999999999999998764
No 67
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=98.80 E-value=5e-08 Score=99.09 Aligned_cols=188 Identities=13% Similarity=0.131 Sum_probs=113.9
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcC-CCCcchHHHHHHHHHHcCCCcee--eecCCC--cCCCCCcchHHHHH
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTG-DFDESSLEFQRKILERSGLGEET--YFPEAM--HAIPPKPSMAAARE 183 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~-~~~~~~~~~~~rI~~rsGI~~R~--~~p~~~--~~~pp~~~~~~~~e 183 (390)
++|.|+|+|+..|-- .+.+++++.+.... .+.+- .+ ++..+...+. .++... .+.|+. ......
T Consensus 1 ~~v~ItG~g~~~p~g---~~~~~~~~~l~~g~s~~~~~-----~~-~~~~~~~~~~~g~i~~f~~~~~~~~~--~~~~~~ 69 (407)
T TIGR03150 1 RRVVVTGLGAVTPLG---NGVEEFWENLLAGKSGIGPI-----TR-FDASDLPVKIAGEVKDFDPEDYIDKK--EARRMD 69 (407)
T ss_pred CcEEEEcceEECCCc---CCHHHHHHHHHcCCCeeEEC-----Cc-ccccCCCCcEEEEeCCcChhhcCCHH--HHhhcC
Confidence 469999999999973 47888888776421 01000 00 0001111110 111100 012221 111123
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCE----EEEeecCC------------------CC--------CCC-HHHHHHHHcC
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGI----LVVNCSLF------------------NP--------TPS-LSAMIVNKYR 232 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~----LIv~~s~~------------------~~--------~Ps-la~~I~~~Lg 232 (390)
...+++.+|++++|+++|+++++||. +++.++.. .. .++ .+..|...+|
T Consensus 70 ~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (407)
T TIGR03150 70 RFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYG 149 (407)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhC
Confidence 45789999999999999999998886 55544321 00 111 4456888999
Q ss_pred CCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcC-----------ccc-CCC---cc----ccccc
Q 016389 233 LRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQN-----------WYF-GNK---KS----MLIPN 293 (390)
Q Consensus 233 Lr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~-----------~~~-~~d---rs----~lv~~ 293 (390)
++.. ++.+.. ||++++.||..|.+.++++..+++||+++|..+.. +.. +.+ .. .--..
T Consensus 150 l~g~--~~~v~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~g 226 (407)
T TIGR03150 150 AKGP--NHAVVT-ACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDG 226 (407)
T ss_pred CCCc--cccccc-HHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCCCc
Confidence 9754 455654 89999999999999999999999999999963211 000 000 00 00124
Q ss_pred ccccCCceEEEeecccc
Q 016389 294 CLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 294 ~LFgDGAAAvLLs~~~~ 310 (390)
+++||||+|+||++.+.
T Consensus 227 ~~~gEGAaalvL~~~~~ 243 (407)
T TIGR03150 227 FVMGEGAGVLVLEELEH 243 (407)
T ss_pred EEEeceEEEEEEeeHHH
Confidence 67899999999997653
No 68
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.79 E-value=8.9e-08 Score=97.70 Aligned_cols=188 Identities=11% Similarity=0.099 Sum_probs=115.3
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcC-CCCcchHHHHHHHHHHcCCCcee--eecCCC--cCCCCCcchHHHHH
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTG-DFDESSLEFQRKILERSGLGEET--YFPEAM--HAIPPKPSMAAARE 183 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~-~~~~~~~~~~~rI~~rsGI~~R~--~~p~~~--~~~pp~~~~~~~~e 183 (390)
++|+|+|+||..|-- .+.+++++.+.... .+.+- .+ ++..+...+. .+|... .+.+++. .....
T Consensus 2 ~~v~ItG~g~~~p~g---~~~~~~w~~l~~g~~~~~~~-----~~-~~~~~~~~~~~g~i~~f~~~~~~~~~~--~~~~~ 70 (411)
T PRK07314 2 RRVVVTGLGAVSPLG---NDVESTWKNLLAGKSGIGPI-----TH-FDTSDLAVKIAGEVKDFNPDDYMSRKE--ARRMD 70 (411)
T ss_pred CcEEEEcceEECCCc---CCHHHHHHHHHhCCCcEEEC-----Cc-ccccCCCccEEEEeCCcChhhcCCHHH--hhcCC
Confidence 579999999999973 47888888776421 01000 00 0011111111 112100 0122211 11123
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcC----EEEEeecCCC--------------------------CCCC-HHHHHHHHcC
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIG----ILVVNCSLFN--------------------------PTPS-LSAMIVNKYR 232 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId----~LIv~~s~~~--------------------------~~Ps-la~~I~~~Lg 232 (390)
....|+..|++++|+++|++++++| .+++.++... ..++ .+..|...+|
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (411)
T PRK07314 71 RFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYG 150 (411)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhC
Confidence 4568999999999999999998887 4555543210 1112 5567889999
Q ss_pred CCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcCc-----c------c-C-C--Ccccc----ccc
Q 016389 233 LRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNW-----Y------F-G-N--KKSML----IPN 293 (390)
Q Consensus 233 Lr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~~-----~------~-~-~--drs~l----v~~ 293 (390)
++... +-+.. +|++++.||..|.++++++..+.|||.++|..+..+ . . . + ..... -..
T Consensus 151 l~Gp~--~tv~~-acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dG 227 (411)
T PRK07314 151 AKGPN--HSIVT-ACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDG 227 (411)
T ss_pred CCCcc--ccchh-hhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCCCC
Confidence 98644 55554 899999999999999999999999999998643210 0 0 0 0 00000 125
Q ss_pred ccccCCceEEEeecccc
Q 016389 294 CLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 294 ~LFgDGAAAvLLs~~~~ 310 (390)
+++||||+|+||++.+.
T Consensus 228 ~~~geGAaavvL~~~~~ 244 (411)
T PRK07314 228 FVMGEGAGILVLEELEH 244 (411)
T ss_pred EeEEceEEEEEEeeHHH
Confidence 78999999999997653
No 69
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=98.77 E-value=2.3e-08 Score=102.06 Aligned_cols=92 Identities=11% Similarity=0.087 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCC--CCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFN--PTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~--~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL 261 (390)
...+|+.+|++++|+++|++++|||.+|+.+..+. ..|..+..+++.+|+.+ ...+++. .||++|..++..|...+
T Consensus 28 ~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~-~~~~~V~-~~gasG~~al~~A~~~I 105 (392)
T PRK06065 28 TPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIR-KPVSRVY-VGGATGVMTAIAGWYHV 105 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCCC-CCeEEEe-cCchhHHHHHHHHHHHH
Confidence 45889999999999999999999999998763322 25678888999999974 6778887 48888899999999999
Q ss_pred hcCCCCeEEEEEeccC
Q 016389 262 QVNWNTYAVVVSTENI 277 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~ 277 (390)
+++..++||||+.|..
T Consensus 106 ~sG~ad~vLVvg~e~~ 121 (392)
T PRK06065 106 ASGLCQKVLAVAEEKM 121 (392)
T ss_pred hCCCCCEEEEEEeecc
Confidence 9999999999999974
No 70
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=98.77 E-value=3.1e-08 Score=100.77 Aligned_cols=94 Identities=16% Similarity=0.154 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CC--CCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FN--PTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~--~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~l 260 (390)
...+|+.+|++++|+++|++++|||.+|+.++. +. ..|..+.+++..+|++ ....++++ ++|+++..+|..|.++
T Consensus 21 ~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~aCasg~~ai~~A~~~ 98 (389)
T PRK06064 21 SLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVE-AACASGGAALRQAYLA 98 (389)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEe-CCcHHHHHHHHHHHHH
Confidence 458899999999999999999999999986653 22 2477889999999997 57788888 5999999999999999
Q ss_pred HhcCCCCeEEEEEeccCCc
Q 016389 261 LQVNWNTYAVVVSTENITQ 279 (390)
Q Consensus 261 L~a~~~~~aLVVstE~~S~ 279 (390)
++++..+++||+++|..|.
T Consensus 99 I~sG~~~~vLv~G~e~~s~ 117 (389)
T PRK06064 99 VASGEADVVLAAGVEKMTD 117 (389)
T ss_pred HHCCCCCEEEEEEEEeccc
Confidence 9999999999999997653
No 71
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=98.76 E-value=2.8e-08 Score=96.21 Aligned_cols=99 Identities=15% Similarity=0.213 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL 261 (390)
..+.+|+.+|++++|+++|++|++||.+|+.|.. ....+..+..+.-..|++..+..+.++ +.|++|+.|+..|...+
T Consensus 24 ~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~-~~CaSG~~Av~~a~~~I 102 (264)
T PF00108_consen 24 VSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVN-RACASGLQAVHLAAMAI 102 (264)
T ss_dssp S-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeeh-hhhhHHHHHHHHhhhhh
Confidence 3678999999999999999999999999998864 333667888888889999889999998 58999999999999999
Q ss_pred hcCCCCeEEEEEeccCCcCcc
Q 016389 262 QVNWNTYAVVVSTENITQNWY 282 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~S~~~~ 282 (390)
+++....+|++++|.+|....
T Consensus 103 ~sG~~dvvlagGvE~mS~~p~ 123 (264)
T PF00108_consen 103 ASGEADVVLAGGVESMSRVPM 123 (264)
T ss_dssp HTTS-SEEEEEEEEETTTSCE
T ss_pred cCCCccEEEEecccccccccc
Confidence 999999999999999987644
No 72
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=98.75 E-value=4.3e-08 Score=100.07 Aligned_cols=95 Identities=9% Similarity=0.165 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCC-CCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNP-TPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~-~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL 261 (390)
...+|+.+|++++|+++|+.++|||.+|+.++. ... .|.++.+++..+|++..+..++++ .+|++|+.|+..|.+.+
T Consensus 26 ~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~-~aCaSG~~Al~~A~~~I 104 (391)
T PRK07661 26 RPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITIN-RYCSSGLQSIAYGAERI 104 (391)
T ss_pred CHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHH
Confidence 458999999999999999888999999988654 222 467777899999998668999998 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCCc
Q 016389 262 QVNWNTYAVVVSTENITQ 279 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~S~ 279 (390)
+++....+||++.|.+|.
T Consensus 105 ~sG~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 105 MLGHSEAVIAGGAESMSL 122 (391)
T ss_pred HcCCCCEEEEEEEeeccc
Confidence 999999999999998774
No 73
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=98.71 E-value=1.7e-07 Score=96.19 Aligned_cols=120 Identities=20% Similarity=0.341 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHcCCCC---CCCcCEEEEeecC----------------CCCCC---------CHHHHHHHHcCCCC
Q 016389 184 EAEQVMYGALDNLFSNTNVN---PKDIGILVVNCSL----------------FNPTP---------SLSAMIVNKYRLRG 235 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~---p~dId~LIv~~s~----------------~~~~P---------sla~~I~~~LgLr~ 235 (390)
....++..|++++|+++|++ +++|+++|-.+.. ....| ..+..|...||++.
T Consensus 79 ~~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~G 158 (410)
T PRK07103 79 LSAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRG 158 (410)
T ss_pred HHHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCCC
Confidence 35689999999999999986 4677777754321 11122 25567889999975
Q ss_pred CceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEecc-CCcC-----------------------cccCC-Ccccc
Q 016389 236 NIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTEN-ITQN-----------------------WYFGN-KKSML 290 (390)
Q Consensus 236 ~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~-~S~~-----------------------~~~~~-drs~l 290 (390)
.++.+++ +|++++.||..|.++++.+..+.|||+++|. .+.. .++-+ ++
T Consensus 159 --~~~tv~~-acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~--- 232 (410)
T PRK07103 159 --EGFTVGG-ASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDR--- 232 (410)
T ss_pred --Ccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCC---
Confidence 4566775 9999999999999999999999999998863 2110 00101 11
Q ss_pred cccccccCCceEEEeecccc
Q 016389 291 IPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 291 v~~~LFgDGAAAvLLs~~~~ 310 (390)
..+++||||+|+||+..+.
T Consensus 233 -dG~v~gEGaaalvLe~~~~ 251 (410)
T PRK07103 233 -DGFIYGEACGAVVLESAES 251 (410)
T ss_pred -CCeeEeeeEEEEEEccHHH
Confidence 2578999999999997653
No 74
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.70 E-value=1.7e-07 Score=96.05 Aligned_cols=186 Identities=12% Similarity=0.084 Sum_probs=113.4
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCCC---CcchHHHHHHH
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPP---KPSMAAAREEA 185 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp---~~~~~~~~eea 185 (390)
+.|.|.|+|+..|-- .+.+++.+.+..-. ..++.+.+ ++..+...+.......+ .|. ..+........
T Consensus 2 ~~v~ItG~g~vsp~G---~~~~~~~~~L~~G~----s~i~~~~~-~~~~~~~~~~~g~i~~f-~~~~~~~~~~~~~~~~~ 72 (406)
T PRK08439 2 KRVVVTGIGMINSLG---LNKESSFKAICNGE----CGIKKITL-FDASDFPVQIAGEITDF-DPTEVMDPKEVKKADRF 72 (406)
T ss_pred CCEEEEeeEEECCCc---CCHHHHHHHHHcCC----CceEeCCC-ccccCCCCceeEEcCCc-ChhhcCCHHHHhhcCHH
Confidence 479999999999974 47788888765321 00000000 00011111110000000 110 11111112345
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcCE----EEEeecCC--------------------------CCCC-CHHHHHHHHcCCC
Q 016389 186 EQVMYGALDNLFSNTNVNPKDIGI----LVVNCSLF--------------------------NPTP-SLSAMIVNKYRLR 234 (390)
Q Consensus 186 ~~la~~Aa~~aL~kagi~p~dId~----LIv~~s~~--------------------------~~~P-sla~~I~~~LgLr 234 (390)
..++..|+.++|+++|+++++++. +++.++.. ...| ..+..|...+|++
T Consensus 73 ~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~ 152 (406)
T PRK08439 73 IQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLK 152 (406)
T ss_pred HHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCCC
Confidence 789999999999999999877763 33333211 0112 4677889999999
Q ss_pred CCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccC-CcC---------------------cccCC-Cccccc
Q 016389 235 GNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENI-TQN---------------------WYFGN-KKSMLI 291 (390)
Q Consensus 235 ~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~-S~~---------------------~~~~~-drs~lv 291 (390)
.. ++.+. .+|++++.||..|.++++.+....+||+++|.. +.. .++-+ ++
T Consensus 153 Gp--~~~~~-~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~---- 225 (406)
T PRK08439 153 GP--NLSSV-TACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDR---- 225 (406)
T ss_pred CC--ccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCC----
Confidence 64 45566 489999999999999999999999999999952 210 00101 12
Q ss_pred ccccccCCceEEEeecccc
Q 016389 292 PNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 292 ~~~LFgDGAAAvLLs~~~~ 310 (390)
...++|+|++++||+..+.
T Consensus 226 ~G~v~gEGa~~lvLe~~~~ 244 (406)
T PRK08439 226 DGFVMGEGAGALVLEEYES 244 (406)
T ss_pred CcEEeeCceEEEEEccHHH
Confidence 2578999999999997543
No 75
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=98.68 E-value=6.4e-08 Score=98.53 Aligned_cols=93 Identities=16% Similarity=0.179 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-C-C-CCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-F-N-PTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~-~-~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~l 260 (390)
...+|+.+|++++|+++|++++|||.+|+.++. . . ..+..+..+...+|++ .+..++++ ++|++|+.||.+|.++
T Consensus 21 ~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~-~~CaSg~~Al~~A~~~ 98 (389)
T PRK07516 21 TLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVE-NACATGSAAVYAALDA 98 (389)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeec-cccHHHHHHHHHHHHH
Confidence 457899999999999999999999999987642 1 1 1111122233456776 57889997 6999999999999999
Q ss_pred HhcCCCCeEEEEEeccCC
Q 016389 261 LQVNWNTYAVVVSTENIT 278 (390)
Q Consensus 261 L~a~~~~~aLVVstE~~S 278 (390)
++++..+++||++.|.+|
T Consensus 99 I~sG~~d~vLvvg~e~~s 116 (389)
T PRK07516 99 IEAGRARIVLVVGAEKMT 116 (389)
T ss_pred HHCCCCCEEEEEEehhhc
Confidence 999999999999999865
No 76
>PRK06158 thiolase; Provisional
Probab=98.68 E-value=5.1e-08 Score=99.24 Aligned_cols=89 Identities=11% Similarity=0.037 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhc
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a 263 (390)
+..+|+.+|++++|+++|++++|||.+|+.+. ....|+ ..+++++|+++ ...+++. .||+++..++..|.+.+++
T Consensus 27 t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~--~~la~~lGl~~-~~~~~~~-~g~~s~~~al~~A~~~I~s 101 (384)
T PRK06158 27 SAMELLAQAAHRALADAGLTMADVDGLFTASP-DDALWG--LSVAEYLGIRP-RFVDGTM-IGGSSFLAHLLPAALALEA 101 (384)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcH--HHHHHHcCCCC-eeecccc-CccHHHHHHHHHHHHHHHc
Confidence 45799999999999999999999999998764 333454 57999999974 5677886 5999999999999999999
Q ss_pred CCCCeEEEE-EeccC
Q 016389 264 NWNTYAVVV-STENI 277 (390)
Q Consensus 264 ~~~~~aLVV-stE~~ 277 (390)
+..++|||+ +.|..
T Consensus 102 G~~d~vLV~~g~~~~ 116 (384)
T PRK06158 102 GLCDVALICYGSNQR 116 (384)
T ss_pred CCCCEEEEeeccccc
Confidence 999999998 44433
No 77
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=98.66 E-value=5.3e-08 Score=99.42 Aligned_cols=92 Identities=14% Similarity=0.295 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCC-C---CCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLF-N---PTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKD 259 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~-~---~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~ 259 (390)
...+|+.+|++++|+++|++|+|||.+|+.++.. . ..++....+...++ .++.+++++ ++|++|+.++..|.+
T Consensus 31 ~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~-~~CaSg~~ai~~A~~ 107 (394)
T PRK06445 31 RPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVD-RQCASSLTTVSIGAM 107 (394)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhh-hhhHHHHHHHHHHHH
Confidence 4689999999999999999999999999887543 2 22344445556665 468899998 699999999999999
Q ss_pred HHhcCCCCeEEEEEeccCC
Q 016389 260 LLQVNWNTYAVVVSTENIT 278 (390)
Q Consensus 260 lL~a~~~~~aLVVstE~~S 278 (390)
+++++..+++||+++|.+|
T Consensus 108 ~I~sG~~d~vLv~G~e~ms 126 (394)
T PRK06445 108 EIATGMADIVIAGGVEHMT 126 (394)
T ss_pred HHHcCCCCEEEEeeecccc
Confidence 9999999999999999766
No 78
>PLN02287 3-ketoacyl-CoA thiolase
Probab=98.66 E-value=1e-07 Score=99.04 Aligned_cols=96 Identities=17% Similarity=0.256 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCC-HHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPS-LSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Ps-la~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~l 260 (390)
....+|+.+|++++|+++|++++|||.+|+.+.. ....|. .+.++...+|+++.+.+++++ .+|++|..++..|.+.
T Consensus 69 ~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~-~~CaSG~~Ai~~Aa~~ 147 (452)
T PLN02287 69 TYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAA 147 (452)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEe-ccCchHHHHHHHHHHH
Confidence 3468999999999999999999999999987653 333344 344566777998668889998 5999999999999999
Q ss_pred HhcCCCCeEEEEEeccCCc
Q 016389 261 LQVNWNTYAVVVSTENITQ 279 (390)
Q Consensus 261 L~a~~~~~aLVVstE~~S~ 279 (390)
++++..+.|||+++|.+|.
T Consensus 148 I~sG~~dvvLv~GvE~mS~ 166 (452)
T PLN02287 148 IKAGFYDIGIGAGVESMTT 166 (452)
T ss_pred HHcCCCCeEEEEeEEecCC
Confidence 9999999999999998763
No 79
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.65 E-value=1.3e-07 Score=96.76 Aligned_cols=96 Identities=15% Similarity=0.187 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHHc-CCCCCCCcCEEEEeecC--CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSN-TNVNPKDIGILVVNCSL--FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260 (390)
Q Consensus 184 ea~~la~~Aa~~aL~k-agi~p~dId~LIv~~s~--~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~l 260 (390)
.+.+|+..|++++|++ +|++|+|||.+|+.|.. +...+.++..+..+.||+.++.++.++ +.|++|+.|+.+|.+.
T Consensus 25 ~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~-~~CaSG~~Av~~A~~~ 103 (400)
T PRK13359 25 RADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTIN-RLCGSGMDAVGVAARA 103 (400)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-ccchhHHHHHHHHHHH
Confidence 4689999999999997 59999999999998764 222377888999999999889999998 6999999999999999
Q ss_pred HhcCCCCeEEEEEeccCCcC
Q 016389 261 LQVNWNTYAVVVSTENITQN 280 (390)
Q Consensus 261 L~a~~~~~aLVVstE~~S~~ 280 (390)
++++....+|+++.|.+|..
T Consensus 104 I~sG~~divlagGvEsmS~~ 123 (400)
T PRK13359 104 IKSGEAALMIAGGVESMSRA 123 (400)
T ss_pred HHcCCCCEEEEeeeeccCCC
Confidence 99999999999999999864
No 80
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=98.65 E-value=1.3e-07 Score=96.92 Aligned_cols=95 Identities=11% Similarity=0.202 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHcC-CCCCCCcCEEEEeecC-C-CCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNT-NVNPKDIGILVVNCSL-F-NPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260 (390)
Q Consensus 184 ea~~la~~Aa~~aL~ka-gi~p~dId~LIv~~s~-~-~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~l 260 (390)
...+|+.+|++++|+++ |++|+|||.+|+.+.. . ...|..+..++..+|++ ++..+.++ .+|++|..++..|.+.
T Consensus 26 ~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~-~~caSG~~av~~Aa~~ 103 (406)
T PRK07851 26 RPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVN-RYCSSSLQTTRMAFHA 103 (406)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeee-ccchhHHHHHHHHHHH
Confidence 45899999999999996 9999999999976532 1 22456778899999996 58888887 4999999999999999
Q ss_pred HhcCCCCeEEEEEeccCCcC
Q 016389 261 LQVNWNTYAVVVSTENITQN 280 (390)
Q Consensus 261 L~a~~~~~aLVVstE~~S~~ 280 (390)
++++..+.|||+++|..|..
T Consensus 104 I~sG~~d~vLv~G~e~~s~~ 123 (406)
T PRK07851 104 IKAGEGDVFISAGVETVSRF 123 (406)
T ss_pred HHCCCCCEEEEeeEEecccC
Confidence 99999999999999987654
No 81
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.64 E-value=1e-07 Score=98.48 Aligned_cols=95 Identities=14% Similarity=0.190 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCC-CCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHh
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFN-PTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~-~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
...+|+.+|++++|+++|++|++||.+|+.++... ..+.++.++....|++..+..+.++ ++|++|+.|+..|.+.++
T Consensus 28 ~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~-~aCaSG~~Ai~~Aa~~I~ 106 (428)
T PRK08963 28 PAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVS-RACATSFQAVANVAESIM 106 (428)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeeh-hhhHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999875422 2355677788999998668899998 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCc
Q 016389 263 VNWNTYAVVVSTENITQ 279 (390)
Q Consensus 263 a~~~~~aLVVstE~~S~ 279 (390)
++....+||++.|.+|.
T Consensus 107 sG~~dvvLvgG~Esms~ 123 (428)
T PRK08963 107 AGTIDIGIAGGADSSSV 123 (428)
T ss_pred CCCCCEEEEecccccCC
Confidence 99999999999998874
No 82
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.63 E-value=7e-07 Score=91.85 Aligned_cols=184 Identities=10% Similarity=0.091 Sum_probs=111.4
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceee--ecCCC--cCCCCCcchHHHHHH
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETY--FPEAM--HAIPPKPSMAAAREE 184 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~--~p~~~--~~~pp~~~~~~~~ee 184 (390)
++|.|+|+|+-.|-- .+.+++++.+.... ..+...++ ++..++..+.. ++... .+.++ +.......
T Consensus 4 ~~VvItG~g~~~p~g---~~~~~~w~~L~~g~----s~i~~~~~-~~~~~~~~~~~g~i~~~~~~~~~~~--~~~~~~d~ 73 (414)
T PRK08722 4 RRVVVTGMGMLSPVG---NTVESSWKALLAGQ----SGIVNIEH-FDTTNFSTRFAGLVKDFNCEEYMSK--KDARKMDL 73 (414)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHhCC----CeeeecCc-cccccCCCceeEEcCCCChhHcCCH--HHHhhcCH
Confidence 589999999999974 47788888765311 00000000 00111111110 11000 00111 11111123
Q ss_pred HHHHHHHHHHHHHHcCCCCCC-----CcCEEEEeecC-C-----------------CC--------CC-CHHHHHHHHcC
Q 016389 185 AEQVMYGALDNLFSNTNVNPK-----DIGILVVNCSL-F-----------------NP--------TP-SLSAMIVNKYR 232 (390)
Q Consensus 185 a~~la~~Aa~~aL~kagi~p~-----dId~LIv~~s~-~-----------------~~--------~P-sla~~I~~~Lg 232 (390)
...++..|+.++|+++|++++ ++++++ .++. . .. .| .++..|...+|
T Consensus 74 ~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~v-Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~g 152 (414)
T PRK08722 74 FIQYGIAAGIQALDDSGLEVTEENAHRIGVAI-GSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRG 152 (414)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEE-eeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhC
Confidence 457889999999999998754 344444 3321 0 11 12 27778889999
Q ss_pred CCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcCc-----------c-----------cCC-Cccc
Q 016389 233 LRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNW-----------Y-----------FGN-KKSM 289 (390)
Q Consensus 233 Lr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~~-----------~-----------~~~-drs~ 289 (390)
++... +.++ .+|++++.||..|.++|+.+..+.+||.++|..+..+ . +-+ ++
T Consensus 153 l~Gp~--~ti~-~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~-- 227 (414)
T PRK08722 153 LRGPN--IAIS-TACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDR-- 227 (414)
T ss_pred CCCCc--cccc-cccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCC--
Confidence 99754 5555 4899999999999999999999999999999743210 0 001 12
Q ss_pred ccccccccCCceEEEeecccc
Q 016389 290 LIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 290 lv~~~LFgDGAAAvLLs~~~~ 310 (390)
..++.|||++|+||...+.
T Consensus 228 --~G~~~gEGaaalvLe~~~~ 246 (414)
T PRK08722 228 --DGFVLGDGAGMMVLEEYEH 246 (414)
T ss_pred --CceEeeceEEEEEEccHHH
Confidence 2578899999999997653
No 83
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.63 E-value=2.9e-07 Score=87.20 Aligned_cols=123 Identities=17% Similarity=0.307 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCC------cCEEEEeecCC-----------C------C------CCC-HHHHHHHHcC
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKD------IGILVVNCSLF-----------N------P------TPS-LSAMIVNKYR 232 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~d------Id~LIv~~s~~-----------~------~------~Ps-la~~I~~~Lg 232 (390)
.....++..|+.+||+++|+++++ +.+++-++..+ . + .|+ .+..|...+|
T Consensus 85 ~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g 164 (254)
T PF00109_consen 85 DRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFG 164 (254)
T ss_dssp -HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHT
T ss_pred hhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcC
Confidence 457789999999999999999853 44444332221 0 1 232 6778999999
Q ss_pred CCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEec-cCCcCcc---------cCCCccc----ccccccccC
Q 016389 233 LRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTE-NITQNWY---------FGNKKSM----LIPNCLFRV 298 (390)
Q Consensus 233 Lr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE-~~S~~~~---------~~~drs~----lv~~~LFgD 298 (390)
++..... +++ +|++++.||..|.++|+.+....|||.++| .++.... ..+++.. .-...++|+
T Consensus 165 l~G~~~t--v~~-acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~~G~v~gE 241 (254)
T PF00109_consen 165 LRGPSYT--VST-ACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFADGFVLGE 241 (254)
T ss_dssp B-SSEEE--EE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB-SB-BB-
T ss_pred CCCcccc--ccc-cccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCCCCEEEEC
Confidence 9976544 444 899999999999999999999999999999 4443211 0110000 013589999
Q ss_pred CceEEEeecc
Q 016389 299 GCSAVLLSNK 308 (390)
Q Consensus 299 GAAAvLLs~~ 308 (390)
||+++||+..
T Consensus 242 Ga~~~vLe~~ 251 (254)
T PF00109_consen 242 GAGALVLERL 251 (254)
T ss_dssp EEEEEEEEEH
T ss_pred ceEEEEEEEh
Confidence 9999999864
No 84
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.60 E-value=2e-07 Score=95.53 Aligned_cols=96 Identities=14% Similarity=0.172 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHHc-CCCCCCCcCEEEEeecC--CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSN-TNVNPKDIGILVVNCSL--FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260 (390)
Q Consensus 184 ea~~la~~Aa~~aL~k-agi~p~dId~LIv~~s~--~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~l 260 (390)
.+.+|+.+|++++|++ +|++|+|||.+|+.+.. +...+..+..+....|++.++.++.++ ++|++|..|+..|.+.
T Consensus 25 ~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~-~aCaSG~~Ai~~A~~~ 103 (401)
T PRK09050 25 RADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTIN-RLCGSGMDAVGTAARA 103 (401)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEe-cccccHHHHHHHHHHH
Confidence 4689999999999996 79999999999998753 222366777899999998789999998 5999999999999999
Q ss_pred HhcCCCCeEEEEEeccCCcC
Q 016389 261 LQVNWNTYAVVVSTENITQN 280 (390)
Q Consensus 261 L~a~~~~~aLVVstE~~S~~ 280 (390)
++++....+|++++|.+|..
T Consensus 104 I~sG~~dvvlagGvEsmS~~ 123 (401)
T PRK09050 104 IKAGEAELMIAGGVESMSRA 123 (401)
T ss_pred HHCCCCCEEEEecccccccC
Confidence 99999999999999999853
No 85
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=98.60 E-value=1.5e-07 Score=96.27 Aligned_cols=91 Identities=18% Similarity=0.212 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCC-----CCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPT-----PSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLA 257 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~-----Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA 257 (390)
...+|+.+|++++|+++|++|+|||.+|+.++. ++.. |+....++. ++. ++.++++++ +|++|..+|..|
T Consensus 25 s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~~--~~~-g~~~~~v~~-~Casg~~al~~A 100 (403)
T PRK06289 25 DFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHP--ALW-GVPASRHEA-ACASGSVATLAA 100 (403)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHhh--cCC-CCceeeccc-ccHHHHHHHHHH
Confidence 458999999999999999999999999987643 2211 333332322 443 457889984 899999999999
Q ss_pred HHHHhcCCCCeEEEEEeccCC
Q 016389 258 KDLLQVNWNTYAVVVSTENIT 278 (390)
Q Consensus 258 ~~lL~a~~~~~aLVVstE~~S 278 (390)
..+++++..++|||+++|..|
T Consensus 101 a~~I~sG~~~~VLvvg~e~~s 121 (403)
T PRK06289 101 MADLRAGRYDVALVVGVELMK 121 (403)
T ss_pred HHHHHcCCCCEEEEEEEEecC
Confidence 999999999999999999765
No 86
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=98.59 E-value=2.5e-07 Score=94.43 Aligned_cols=95 Identities=11% Similarity=0.214 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCC-CCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNP-TPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~-~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL 261 (390)
.+.+|+.+|++++|+++|++|+|||.+|+.|.. ... .+..+..+....|++.++..+.+. ++|++|..|+..|.+.+
T Consensus 25 ~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~-~~CaSG~~A~~~A~~~I 103 (387)
T PRK07850 25 HAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTID-CQCGSAQQANHLVAGLI 103 (387)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEe-cccccHHHHHHHHHHHH
Confidence 458999999999999999999999999998754 221 133555777789998779999998 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCCc
Q 016389 262 QVNWNTYAVVVSTENITQ 279 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~S~ 279 (390)
+++....+|++++|.+|.
T Consensus 104 ~sG~~dvvla~G~E~mS~ 121 (387)
T PRK07850 104 AAGAIDVGIACGVEAMSR 121 (387)
T ss_pred HCCCCCEEEEEeEecCCC
Confidence 999999999999999885
No 87
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.58 E-value=2.8e-07 Score=94.46 Aligned_cols=96 Identities=11% Similarity=0.161 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC--CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL--FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~--~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL 261 (390)
.+.+|+.+|++++|+++|++|+|||.+|+.+.. ....+..+.++....|++.++..+.++ ++|++|..|+..|.+.+
T Consensus 25 ~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~-~~CaSG~~Ai~~A~~~I 103 (401)
T PRK08131 25 RPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVN-RLCASGLAAVIDAARAI 103 (401)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeee-chhhhHHHHHHHHHHHH
Confidence 468999999999999999999999999988753 222355667788999998779999998 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCCcC
Q 016389 262 QVNWNTYAVVVSTENITQN 280 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~S~~ 280 (390)
+++....+|+++.|.+|..
T Consensus 104 ~sG~~dvvlagG~Esms~~ 122 (401)
T PRK08131 104 TCGEGDLYLAGGVESMSRA 122 (401)
T ss_pred HCCCCCEEEEEEecCCCCC
Confidence 9999999999999988853
No 88
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=98.58 E-value=1.7e-07 Score=95.73 Aligned_cols=95 Identities=13% Similarity=0.241 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHh
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
.+.+|+.+|++++|+++|++|+|||.+|+.+.. ...-+..+.+++.+.|++.++..+.+. .+|++|+.|+..|.+.++
T Consensus 26 ~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~A~~~I~ 104 (392)
T PRK06633 26 PAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTIN-KVCGSGLKSVALAANSIM 104 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhc-chhHHHHHHHHHHHHHHH
Confidence 568999999999999999999999999997753 122345677788999998779999998 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCc
Q 016389 263 VNWNTYAVVVSTENITQ 279 (390)
Q Consensus 263 a~~~~~aLVVstE~~S~ 279 (390)
++....+|+++.|.+|.
T Consensus 105 sG~~dvvla~G~E~ms~ 121 (392)
T PRK06633 105 TGDNEIVIAGGQENMSL 121 (392)
T ss_pred cCCCCEEEEcccccCCC
Confidence 99999999999998874
No 89
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.58 E-value=2.7e-07 Score=94.09 Aligned_cols=95 Identities=14% Similarity=0.239 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCC-CCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHh
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLF-NPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~-~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
.+.+|+.+|++++|+++|++|+|||.+|+.+... ...+..+..++..+|++.++..+.+. .+|++|+.++..|.+.++
T Consensus 25 ~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~ 103 (388)
T PRK06366 25 KAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVN-VVCASGMLAVESAAREIM 103 (388)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeee-chhhHHHHHHHHHHHHHh
Confidence 4588999999999999999999999999876421 11234567788999998667888887 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCc
Q 016389 263 VNWNTYAVVVSTENITQ 279 (390)
Q Consensus 263 a~~~~~aLVVstE~~S~ 279 (390)
++..+.+|+++.|.+|.
T Consensus 104 sG~~d~vla~G~e~ms~ 120 (388)
T PRK06366 104 LGERDLVIAGGMENMSN 120 (388)
T ss_pred cCCCCEEEEEeeEcccc
Confidence 99999999988898763
No 90
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.53 E-value=4.1e-07 Score=93.25 Aligned_cols=96 Identities=11% Similarity=0.184 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHHc-CCCCCCCcCEEEEeecC--CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSN-TNVNPKDIGILVVNCSL--FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260 (390)
Q Consensus 184 ea~~la~~Aa~~aL~k-agi~p~dId~LIv~~s~--~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~l 260 (390)
.+.+|+.+|++++|++ +|++|+|||.+|+.+.. .+..+..+..+...+|++.++.++.++ ++|++|..|+..|.+.
T Consensus 24 ~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~a~~~ 102 (400)
T TIGR02430 24 RADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVN-RLCGSGLDAIGMAARA 102 (400)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEee-chhhhHHHHHHHHHHH
Confidence 4689999999999996 69999999999997653 222366788899999998779999998 5999999999999999
Q ss_pred HhcCCCCeEEEEEeccCCcC
Q 016389 261 LQVNWNTYAVVVSTENITQN 280 (390)
Q Consensus 261 L~a~~~~~aLVVstE~~S~~ 280 (390)
++++....+|+++.|.+|..
T Consensus 103 I~sG~~d~~la~G~E~ms~~ 122 (400)
T TIGR02430 103 IKAGEADLLIAGGVESMSRA 122 (400)
T ss_pred HHCCCCCEEEEeccccccCC
Confidence 99999999999999998853
No 91
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=98.52 E-value=9.9e-07 Score=87.99 Aligned_cols=166 Identities=19% Similarity=0.301 Sum_probs=129.5
Q ss_pred CCCCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeee-cCCCcCCCCCcchHHHHHHH
Q 016389 107 RPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYF-PEAMHAIPPKPSMAAAREEA 185 (390)
Q Consensus 107 r~~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~-p~~~~~~pp~~~~~~~~eea 185 (390)
.|.+|.|.++-+|.|. .-|.|++++.+-+.. ..+ -..|+++.... ..+ +|..
T Consensus 8 ~p~dvGI~aieiyfP~--~yV~Q~elEk~d~vs---~gK---------ytIGLGq~~Mgfcsd-------------rEDi 60 (462)
T KOG1393|consen 8 WPKDVGIIAIEIYFPS--QYVDQEELEKFDGVS---AGK---------YTIGLGQTQMGFCSD-------------REDI 60 (462)
T ss_pred CccccceeEEEEEcCc--cccChhhHhhcCCcc---ccc---------eEeccCcceecccCc-------------hhhh
Confidence 5779999999999999 679999988754321 011 13466655432 111 4778
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcC--CCCCceeEecCCccchhHHHHHHHHHHHHh
Q 016389 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYR--LRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 186 ~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~Lg--Lr~~v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
..+...++.+++++-+|+++.|+.|-|.|-+ -.-.-|.-..+.+-++ =..||.-+|..+ +|.||..||--|-+++.
T Consensus 61 ~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttn-ACYGGtaALfnavnWiE 139 (462)
T KOG1393|consen 61 ISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTN-ACYGGTAALFNAVNWIE 139 (462)
T ss_pred hhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccccccccc-cccccHHHHHHHhhhhh
Confidence 8999999999999999999999999999855 3345678888888887 566899999984 99999999999999999
Q ss_pred cCC--CCeEEEEEeccCCcCccc-CCCcccccccccccCCceEEEeeccc
Q 016389 263 VNW--NTYAVVVSTENITQNWYF-GNKKSMLIPNCLFRVGCSAVLLSNKR 309 (390)
Q Consensus 263 a~~--~~~aLVVstE~~S~~~~~-~~drs~lv~~~LFgDGAAAvLLs~~~ 309 (390)
+.- +++|||||+|+. +|. |+- .+.=|-||.|+|+++..
T Consensus 140 SssWDGr~aivV~gDIA---vY~~G~a------RpTGGAgAVAmLIgPnA 180 (462)
T KOG1393|consen 140 SSSWDGRYAIVVCGDIA---VYAKGNA------RPTGGAGAVAMLIGPNA 180 (462)
T ss_pred hcccCCceeEEEEeeEE---EecCCCC------CCCCCcceEEEEEcCCC
Confidence 985 599999999986 443 332 34568999999999764
No 92
>PRK08256 lipid-transfer protein; Provisional
Probab=98.52 E-value=3.8e-07 Score=93.00 Aligned_cols=91 Identities=14% Similarity=0.170 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhc
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a 263 (390)
...+|+.+|++++|+++|++++|||.+++.+....... ...+...+|++ ++..++++ .+|+++..+|..|.+++++
T Consensus 21 ~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~--~~~~~~~lGl~-~~~~~~v~-~~caSg~~ai~~A~~~I~s 96 (391)
T PRK08256 21 DYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS--GQRALYEVGMT-GIPIVNVN-NNCSTGSTALFLARQAVRS 96 (391)
T ss_pred CHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch--hHHHHHHcCCC-CCCCcccc-cccHHHHHHHHHHHHHHHC
Confidence 45799999999999999999999999987654322111 23467889996 46778887 5999999999999999999
Q ss_pred CCCCeEEEEEeccCC
Q 016389 264 NWNTYAVVVSTENIT 278 (390)
Q Consensus 264 ~~~~~aLVVstE~~S 278 (390)
+..++|||+++|..|
T Consensus 97 G~~d~vLv~g~e~~s 111 (391)
T PRK08256 97 GAADCALALGFEQMQ 111 (391)
T ss_pred CCCCEEEEEEEeecc
Confidence 999999999999765
No 93
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.51 E-value=3.6e-07 Score=94.49 Aligned_cols=95 Identities=13% Similarity=0.172 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCC-CCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHh
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLF-NPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~-~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
...+|+.+|++++|+++|++|+|||.+|+.+... ...+.++..+.-..|++..+..+.+. ++|++|+.|+.+|.+.++
T Consensus 30 ~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~-~~CaSG~~A~~~a~~~I~ 108 (430)
T TIGR02446 30 PAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVT-RACATSFQSAVNVAESIM 108 (430)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhh-hhhhHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999987542 22244666666667998778999998 699999999999999999
Q ss_pred cCCCCeEEEEEeccCCc
Q 016389 263 VNWNTYAVVVSTENITQ 279 (390)
Q Consensus 263 a~~~~~aLVVstE~~S~ 279 (390)
++....+|+++.|.+|.
T Consensus 109 sG~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 109 AGAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCCEEEEeeeEcccC
Confidence 99999999999999984
No 94
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=98.51 E-value=5.5e-07 Score=92.00 Aligned_cols=94 Identities=18% Similarity=0.158 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCC-CCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHh
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLF-NPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~-~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
...+|+.+|++++|+++|++++|||.+|+.+... ...+..+..+...+|++.++..+.++ .+|+++..++..|.+.++
T Consensus 24 ~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~ 102 (394)
T PLN02644 24 SATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVN-KVCASGMKAVMLAAQSIQ 102 (394)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEe-ccchHHHHHHHHHHHHHH
Confidence 4589999999999999999999999999765321 11234555688999997668888887 489999999999999999
Q ss_pred cCCCCeEEEEEeccCC
Q 016389 263 VNWNTYAVVVSTENIT 278 (390)
Q Consensus 263 a~~~~~aLVVstE~~S 278 (390)
++..+.+||++.|.+|
T Consensus 103 sG~~d~vlv~G~E~~s 118 (394)
T PLN02644 103 LGINDVVVAGGMESMS 118 (394)
T ss_pred cCCCCEEEEEeEEecC
Confidence 9999999999999876
No 95
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.51 E-value=1.5e-06 Score=89.17 Aligned_cols=183 Identities=12% Similarity=0.167 Sum_probs=111.4
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCC-CCcchHHHHHHHHHHcCCCcee--eecCC------CcC----CCCC
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGD-FDESSLEFQRKILERSGLGEET--YFPEA------MHA----IPPK 175 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~-~~~~~~~~~~rI~~rsGI~~R~--~~p~~------~~~----~pp~ 175 (390)
++|.|+|+|+..|.- .+.+++++.+..-.. +.+-.. .+..+...+. .+|.. .+. .++
T Consensus 4 ~~V~ItG~g~~~p~g---~~~~~~w~~l~~G~s~i~~~~~------~~~~~~~~~~~g~i~~~~~~~~~~fd~~~~i~~- 73 (424)
T PRK06333 4 KRIVVTGMGAVSPLG---CGVETFWQRLLAGQSGIRTLTD------FPVGDLATKIGGQVPDLAEDAEAGFDPDRYLDP- 73 (424)
T ss_pred CCEEEEcceEECCCC---CCHHHHHHHHHcCCCeEEeCCc------ccccCCCCceEEEeccccccccccCChhHcCCH-
Confidence 679999999999974 477888887653210 000000 0000111110 11110 000 111
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHcCCCCCCCc-C----EEEEeecCC-C---------------------CCC-----CH
Q 016389 176 PSMAAAREEAEQVMYGALDNLFSNTNVNPKDI-G----ILVVNCSLF-N---------------------PTP-----SL 223 (390)
Q Consensus 176 ~~~~~~~eea~~la~~Aa~~aL~kagi~p~dI-d----~LIv~~s~~-~---------------------~~P-----sl 223 (390)
+..........++..|++++|+++|++++++ + .+++.++.. . ..| ..
T Consensus 74 -~~~~~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (424)
T PRK06333 74 -KDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMA 152 (424)
T ss_pred -HHHhhcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHH
Confidence 1111223457789999999999999988766 2 344444321 0 011 13
Q ss_pred HHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcCc----------------------
Q 016389 224 SAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNW---------------------- 281 (390)
Q Consensus 224 a~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~~---------------------- 281 (390)
+..|...||++... +.+. .+|++++.||..|.++|+.+....+||+++|.....+
T Consensus 153 a~~is~~~gl~Gp~--~~v~-~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~ 229 (424)
T PRK06333 153 AGHVSIRYGFKGPL--GAPV-TACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQA 229 (424)
T ss_pred HHHHHHHhCCCCCC--cccc-chhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcC
Confidence 56788899998655 4455 4899999999999999999999999999999732110
Q ss_pred -ccCC-CcccccccccccCCceEEEeeccc
Q 016389 282 -YFGN-KKSMLIPNCLFRVGCSAVLLSNKR 309 (390)
Q Consensus 282 -~~~~-drs~lv~~~LFgDGAAAvLLs~~~ 309 (390)
++-+ ++ ...+.||||+++||+..+
T Consensus 230 ~~Pfd~~~----~G~~~gEGaa~lvLe~~~ 255 (424)
T PRK06333 230 SRPFDRDR----DGFVMGEGAGILVIETLE 255 (424)
T ss_pred CCCCCCCC----CCeEEecceEEEEEeeHH
Confidence 0000 11 246789999999998754
No 96
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=98.48 E-value=7.2e-07 Score=91.14 Aligned_cols=96 Identities=14% Similarity=0.223 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCC-CC-CCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLF-NP-TPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~-~~-~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL 261 (390)
.+.+|+.+|++++|+++|++|+|||.+|+.+... .. .+..+..+.-.-||+.++..+.++ .+|++|+.|+..|.+.+
T Consensus 25 ~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~-~~CaSG~~Ai~~A~~~I 103 (390)
T PRK06504 25 HPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSID-RQCGSSQQALHFAAQAV 103 (390)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-chhhHHHHHHHHHHHHH
Confidence 4689999999999999999999999999987541 11 234544444445887789999998 58999999999999999
Q ss_pred hcCCCCeEEEEEeccCCcC
Q 016389 262 QVNWNTYAVVVSTENITQN 280 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~S~~ 280 (390)
+++....+|+++.|.+|..
T Consensus 104 ~sG~~dvvLagGvEsmS~~ 122 (390)
T PRK06504 104 MSGTMDIVIAAGVESMTRV 122 (390)
T ss_pred HCCCCCEEEEeeeeecCCC
Confidence 9999999999999998853
No 97
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.47 E-value=7.2e-07 Score=91.30 Aligned_cols=94 Identities=18% Similarity=0.171 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCC-CCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHh
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLF-NPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~-~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
...+|+.+|++++|+++|++++|||.+++.+... +........+.+.+|+++ +..+.+. ++|+++..++..|...++
T Consensus 26 ~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~~-~~~~~v~-~~c~sg~~ai~~A~~~I~ 103 (398)
T PRK06157 26 GAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPN-IPVTRVE-NFCATGSEAFRGAVYAVA 103 (398)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCCC-CCEEEEe-cccHHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999865422 111112356888999974 7788887 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCc
Q 016389 263 VNWNTYAVVVSTENITQ 279 (390)
Q Consensus 263 a~~~~~aLVVstE~~S~ 279 (390)
++..+.+||++.|.+|.
T Consensus 104 sG~~d~vlv~G~e~~s~ 120 (398)
T PRK06157 104 SGAYDIALALGVEKLKD 120 (398)
T ss_pred CCCCCEEEEEEEeeccc
Confidence 99999999999998653
No 98
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.44 E-value=8.1e-07 Score=90.64 Aligned_cols=95 Identities=11% Similarity=0.143 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHHc-CCCCCCCcCEEEEeecCC-CC-CCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSN-TNVNPKDIGILVVNCSLF-NP-TPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260 (390)
Q Consensus 184 ea~~la~~Aa~~aL~k-agi~p~dId~LIv~~s~~-~~-~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~l 260 (390)
.+.+|+..+++++|++ +|++|+|||.+|+.+... .. -+..+..+....|++..+.++.++ .+|++|+.|+.+|.+.
T Consensus 26 ~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~-~~caSG~~Ai~~A~~~ 104 (387)
T PRK08947 26 RAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVN-RLCGSSMQALHDAARA 104 (387)
T ss_pred CHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeee-chhHHHHHHHHHHHHH
Confidence 4588999999999997 799999999999887542 21 244566788899998678889998 5999999999999999
Q ss_pred HhcCCCCeEEEEEeccCCc
Q 016389 261 LQVNWNTYAVVVSTENITQ 279 (390)
Q Consensus 261 L~a~~~~~aLVVstE~~S~ 279 (390)
++++..+.+||++.|.+|.
T Consensus 105 I~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 105 IMTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HHCCCCCEEEEcccccccc
Confidence 9999999999999998874
No 99
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.43 E-value=2.5e-06 Score=87.50 Aligned_cols=185 Identities=12% Similarity=0.177 Sum_probs=111.4
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHH-cCCCceeeecCCCcCCCC--CcchHHHHHHH
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILER-SGLGEETYFPEAMHAIPP--KPSMAAAREEA 185 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~r-sGI~~R~~~p~~~~~~pp--~~~~~~~~eea 185 (390)
++|+|.|+|+-.|-- .+.+++.+.+..-. .-++.+.+ ++. .++..+...+...+..+. ..+........
T Consensus 2 ~~VvITG~g~vtp~G---~~~~~~~~~L~~g~----s~i~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~ 73 (405)
T PRK09116 2 RRVVVTGMGGVTALG---EDWQTIAARLKAGR----NAVRRMPE-WDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRV 73 (405)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHcCC----CCEEeCCc-hhhccCCCCceEEEecCcChhHhcCHHHHhhCCHH
Confidence 479999999999973 57788888765311 00000000 000 122222211111111110 01111111234
Q ss_pred HHHHHHHHHHHHHcCCCCC------CCcCEEEEeecCCC--------------------------CCCC-HHHHHHHHcC
Q 016389 186 EQVMYGALDNLFSNTNVNP------KDIGILVVNCSLFN--------------------------PTPS-LSAMIVNKYR 232 (390)
Q Consensus 186 ~~la~~Aa~~aL~kagi~p------~dId~LIv~~s~~~--------------------------~~Ps-la~~I~~~Lg 232 (390)
..++..|++++|+++|++. +++++++ .++... ..|+ .+..|...+|
T Consensus 74 ~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~-Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 152 (405)
T PRK09116 74 SLMATRASELALEDAGLLGDPILTDGRMGIAY-GSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFG 152 (405)
T ss_pred HHHHHHHHHHHHHHcCCCCccccCCCcEEEEE-eecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhC
Confidence 6789999999999999832 3444444 332110 1132 6778899999
Q ss_pred CCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcC----c-----------------ccCC-Ccccc
Q 016389 233 LRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQN----W-----------------YFGN-KKSML 290 (390)
Q Consensus 233 Lr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~----~-----------------~~~~-drs~l 290 (390)
++... +-++. +|++++.||..|.++++.+..+.+||.++|..+.. | ++-+ ++
T Consensus 153 ~~Gp~--~ti~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~--- 226 (405)
T PRK09116 153 LKGRV--IPTSS-ACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANR--- 226 (405)
T ss_pred CCCCc--ccccc-hhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCC---
Confidence 99754 55554 89999999999999999999999999999875421 0 0000 12
Q ss_pred cccccccCCceEEEeeccc
Q 016389 291 IPNCLFRVGCSAVLLSNKR 309 (390)
Q Consensus 291 v~~~LFgDGAAAvLLs~~~ 309 (390)
..++.|+|+++++|+..+
T Consensus 227 -~G~v~gEGa~~~vLe~~~ 244 (405)
T PRK09116 227 -DGLVIGEGAGTLVLEELE 244 (405)
T ss_pred -CCEeeeccEEEEEEccHH
Confidence 257889999999999754
No 100
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.40 E-value=1.5e-06 Score=90.17 Aligned_cols=95 Identities=22% Similarity=0.216 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCC--cCEEEEeecCC---CCCCCHHHHHHHHcCCC------CCceeEecCCccchhHHH
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKD--IGILVVNCSLF---NPTPSLSAMIVNKYRLR------GNIRSYNLGGMGCSAGVI 252 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~d--Id~LIv~~s~~---~~~Psla~~I~~~LgLr------~~v~~~dl~gmGCsggl~ 252 (390)
...+|+.+|++++|+++|++|+| ||.+|+.+... ...+.++..+...+|++ ..+.++.+. .+|++|..
T Consensus 47 s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~-~~caSG~~ 125 (438)
T PTZ00455 47 TLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVE-GACASGGL 125 (438)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEE-CcCHHHHH
Confidence 45899999999999999999999 99999876421 12355666777666655 467888887 59999999
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccCCc
Q 016389 253 AVDLAKDLLQVNWNTYAVVVSTENITQ 279 (390)
Q Consensus 253 aL~lA~~lL~a~~~~~aLVVstE~~S~ 279 (390)
|+..|.+.++++..+.|||+++|..|.
T Consensus 126 Ai~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 126 AVQSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHHHCCCCCEEEEEEEeeccc
Confidence 999999999999999999999997654
No 101
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=98.40 E-value=8.4e-06 Score=84.42 Aligned_cols=119 Identities=13% Similarity=0.112 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCC-----CcCEEEEeecCCC------------------CC--------C-CHHHHHHHHcC
Q 016389 185 AEQVMYGALDNLFSNTNVNPK-----DIGILVVNCSLFN------------------PT--------P-SLSAMIVNKYR 232 (390)
Q Consensus 185 a~~la~~Aa~~aL~kagi~p~-----dId~LIv~~s~~~------------------~~--------P-sla~~I~~~Lg 232 (390)
...++..|+.++|+++|+++. +.+.+++.++... .. | ..+..|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 457999999999999998542 3555666553211 11 1 14567889999
Q ss_pred CCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcC-----c------------------ccCC-Ccc
Q 016389 233 LRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQN-----W------------------YFGN-KKS 288 (390)
Q Consensus 233 Lr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~-----~------------------~~~~-drs 288 (390)
++... +-++. +|++++.||..|.++++.+....+||.++|..... + ++-+ ++
T Consensus 173 l~Gp~--~tv~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~- 248 (437)
T PLN02836 173 FQGPN--HAAVT-ACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR- 248 (437)
T ss_pred CCCce--eceeC-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC-
Confidence 98654 44554 89999999999999999999899999888863110 0 0000 11
Q ss_pred cccccccccCCceEEEeecccc
Q 016389 289 MLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 289 ~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
..+..||||+|+||+..+.
T Consensus 249 ---~G~~~gEGaaalVLe~~~~ 267 (437)
T PLN02836 249 ---DGFVIGEGAGVLVLEELEH 267 (437)
T ss_pred ---CCeeeecCEEEEEEeeHHH
Confidence 2578999999999997653
No 102
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.39 E-value=1.3e-06 Score=90.25 Aligned_cols=92 Identities=15% Similarity=0.089 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCC-CCCCCHH-HHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHh
Q 016389 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLF-NPTPSLS-AMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 185 a~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~-~~~Psla-~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
..+|+.+|+++||+++|++++|||.+|+.+... ...+.++ ..++..+|+++ +.++.+. .||+++..++..|...++
T Consensus 37 ~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~-~~~~~v~-~~~aSg~~ai~~A~~~I~ 114 (430)
T PRK06365 37 FRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVP-KPSKRIE-GGGATGGLAFQAGYEEIA 114 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCC-CceEEEe-CCcHHHHHHHHHHHHHHH
Confidence 379999999999999999999999988765321 1122333 34579999985 7888887 599999999999999999
Q ss_pred cCCCCeEEEEEeccCC
Q 016389 263 VNWNTYAVVVSTENIT 278 (390)
Q Consensus 263 a~~~~~aLVVstE~~S 278 (390)
++..+.|||+++|..|
T Consensus 115 sG~~~~vLv~G~e~~s 130 (430)
T PRK06365 115 SGRMDCVAVYGFETMS 130 (430)
T ss_pred cCCCCEEEEEEeeecc
Confidence 9999999999999754
No 103
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=98.37 E-value=2.1e-06 Score=88.34 Aligned_cols=97 Identities=15% Similarity=0.162 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCC--CCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNP--TPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~--~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL 261 (390)
.+.+|+..+++.+++++|++|++||.+|+.|..... -+.++-++.-+-||+.++..+.++ +-|++|+.|+.+|.+.+
T Consensus 28 ~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvn-r~C~Sgl~ai~~aa~~I 106 (417)
T PRK06025 28 HPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLD-RFCGGGITSVNLAAAQI 106 (417)
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeec-cccchHHHHHHHHHHHH
Confidence 568999999999999999999999999998874322 367889999999999999999998 68999999999999999
Q ss_pred hcCCCCeEEEEEeccCCcCc
Q 016389 262 QVNWNTYAVVVSTENITQNW 281 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~S~~~ 281 (390)
+++....+|..++|.+|..-
T Consensus 107 ~~G~~~~~laGG~EsmS~~P 126 (417)
T PRK06025 107 MSGMEDLVIAGGTEMMSYTA 126 (417)
T ss_pred HcCCCCEEEEeeeeccCCCc
Confidence 99999999999999999653
No 104
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.36 E-value=7.3e-06 Score=83.88 Aligned_cols=183 Identities=13% Similarity=0.154 Sum_probs=109.7
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCcee--eecCCC--cCCCCCcchHHHHHH
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEET--YFPEAM--HAIPPKPSMAAAREE 184 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~--~~p~~~--~~~pp~~~~~~~~ee 184 (390)
++|.|+|+|+..|-- .+.+++++.+..-. ..++...+ ++..+...+. .++... ...|+ +.......
T Consensus 1 ~~VvItG~G~vsp~G---~~~~~~w~~L~~G~----s~i~~~~~-~~~~~~~~~~~g~i~~~~~~~~~~~--~~~~~~d~ 70 (399)
T cd00832 1 RRAVVTGIGVVAPNG---LGVEEYWKAVLDGR----SGLGPITR-FDPSGYPARLAGEVPDFDAAEHLPG--RLLPQTDR 70 (399)
T ss_pred CCEEEEeeEEeCCCC---CCHHHHHHHHHhCC----CeEeeCCc-cccccCCCceeEEeCCcChhhcCCH--HHHhhCCH
Confidence 469999999999973 46788888765321 00000000 0011111110 011000 01121 11111234
Q ss_pred HHHHHHHHHHHHHHcCCCCCCC-----cCEEEEeecCC------------------CCCC---------CHHHHHHHHcC
Q 016389 185 AEQVMYGALDNLFSNTNVNPKD-----IGILVVNCSLF------------------NPTP---------SLSAMIVNKYR 232 (390)
Q Consensus 185 a~~la~~Aa~~aL~kagi~p~d-----Id~LIv~~s~~------------------~~~P---------sla~~I~~~Lg 232 (390)
...++..|++++|+++|+++++ +++++ .++.. ...| ..+..|...+|
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~-Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVT-ASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHG 149 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEE-ccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhC
Confidence 5679999999999999997754 44433 33211 0011 24568889999
Q ss_pred CCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcC---------------------cccCC-Ccccc
Q 016389 233 LRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQN---------------------WYFGN-KKSML 290 (390)
Q Consensus 233 Lr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~---------------------~~~~~-drs~l 290 (390)
++.... -++ .+|++++.||..|.++|+.+. ..+||.++|..... .++-+ ++
T Consensus 150 l~Gp~~--ti~-~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~--- 222 (399)
T cd00832 150 MRGPSG--VVV-AEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA--- 222 (399)
T ss_pred CCCCcc--ccc-chhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC---
Confidence 997554 455 489999999999999999999 99999998863210 00101 12
Q ss_pred cccccccCCceEEEeecccc
Q 016389 291 IPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 291 v~~~LFgDGAAAvLLs~~~~ 310 (390)
..++.|+|+++++|+..+.
T Consensus 223 -~G~~~gEGa~~lvLe~~~~ 241 (399)
T cd00832 223 -AGYVPGEGGAILVLEDAAA 241 (399)
T ss_pred -CCEeeeceEEEEEEeeHHH
Confidence 2578999999999997654
No 105
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=98.36 E-value=7.6e-06 Score=86.94 Aligned_cols=184 Identities=12% Similarity=0.136 Sum_probs=110.1
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCc----CCCCCcchHHHHHH
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMH----AIPPKPSMAAAREE 184 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~----~~pp~~~~~~~~ee 184 (390)
++|.|.|+|+..|-- .+.++|.+.+..- . ..++.+++ ++...+..+....-..+ +.++ +.......
T Consensus 129 ~rVvITG~G~vtp~G---~~~~~~w~~L~~G-~---s~i~~~~~-f~~~~~~~~~ag~i~~f~~~~~l~~--k~~r~md~ 198 (540)
T PLN02787 129 RRVVVTGMGVVSPLG---HDPDVFYNNLLEG-V---SGISEIER-FDCSQFPTRIAGEIKSFSTDGWVAP--KLSKRMDK 198 (540)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHcC-C---CcccccCc-cchhhCCccccccccccChhhcCCH--HHHHhCCH
Confidence 589999999999974 4778888876531 1 00100000 00011111100000000 0111 11111233
Q ss_pred HHHHHHHHHHHHHHcCCCCCC--------CcCEEEEeecCCC-------------------C------CC-CHHHHHHHH
Q 016389 185 AEQVMYGALDNLFSNTNVNPK--------DIGILVVNCSLFN-------------------P------TP-SLSAMIVNK 230 (390)
Q Consensus 185 a~~la~~Aa~~aL~kagi~p~--------dId~LIv~~s~~~-------------------~------~P-sla~~I~~~ 230 (390)
...++..|++++|+++|++++ .+++ ++.++... + .+ ..+.+|...
T Consensus 199 ~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV-~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 277 (540)
T PLN02787 199 FMLYLLTAGKKALADGGITEDVMKELDKTKCGV-LIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMD 277 (540)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCCceEE-EEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHH
Confidence 457889999999999998764 2344 44333110 0 11 145688899
Q ss_pred cCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccC-CcC----------c-----------ccCC-Cc
Q 016389 231 YRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENI-TQN----------W-----------YFGN-KK 287 (390)
Q Consensus 231 LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~-S~~----------~-----------~~~~-dr 287 (390)
+|++.. .+.++. +|++++.||..|.++|+.+..+.+||.++|.. +.. + ++-| ++
T Consensus 278 ~gl~Gp--~~tist-ACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~r 354 (540)
T PLN02787 278 LGWMGP--NYSIST-ACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNR 354 (540)
T ss_pred hCCCCC--cccccc-ccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCC
Confidence 999864 455554 89999999999999999999999999999952 210 0 1111 12
Q ss_pred ccccccccccCCceEEEeecccc
Q 016389 288 SMLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 288 s~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
...++|+||+++||+..+.
T Consensus 355 ----dGfv~GEGAa~lVLE~~e~ 373 (540)
T PLN02787 355 ----DGFVMGEGAGVLLLEELEH 373 (540)
T ss_pred ----CCcccccceEEEEEeeHHH
Confidence 2578999999999997543
No 106
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.36 E-value=1.2e-06 Score=89.37 Aligned_cols=95 Identities=12% Similarity=0.133 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHc-CCCCCCCcCEEEEeecCC-CC-CCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSN-TNVNPKDIGILVVNCSLF-NP-TPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260 (390)
Q Consensus 184 ea~~la~~Aa~~aL~k-agi~p~dId~LIv~~s~~-~~-~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~l 260 (390)
.+.+|+.+|++++|++ +|++|+|||.+|+.+... .. .+..+..+....|++..+.++.++ .+|++|+.|+.+|.+.
T Consensus 24 ~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~-~~CaSG~~Ai~~Aa~~ 102 (385)
T TIGR02445 24 RAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVN-RLCGSSMQALHDAARA 102 (385)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhh-hhhHHHHHHHHHHHHH
Confidence 4689999999999997 599999999999887532 11 234566666678998779889998 5999999999999999
Q ss_pred HhcCCCCeEEEEEeccCCc
Q 016389 261 LQVNWNTYAVVVSTENITQ 279 (390)
Q Consensus 261 L~a~~~~~aLVVstE~~S~ 279 (390)
++++....+|+++.|.+|.
T Consensus 103 I~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 103 IMTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HHCCCCCEEEEeeehhccc
Confidence 9999999999999998774
No 107
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.36 E-value=8.4e-06 Score=83.16 Aligned_cols=81 Identities=17% Similarity=0.232 Sum_probs=63.9
Q ss_pred CCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcCc---------------cc-C
Q 016389 221 PSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNW---------------YF-G 284 (390)
Q Consensus 221 Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~~---------------~~-~ 284 (390)
+..+..|+..||++. .++.++ .||++++.||..|.++++.+..++|||+++|..+... ++ +
T Consensus 137 ~~~a~~ia~~lgl~G--p~~~i~-~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd 213 (392)
T PRK09185 137 GSLADFLRAYLGLSG--PAYTIS-TACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFS 213 (392)
T ss_pred cHHHHHHHHHhCCCC--Cccccc-ChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCc
Confidence 457888999999985 456676 4999999999999999999999999999998644310 01 1
Q ss_pred CCcccccccccccCCceEEEeecc
Q 016389 285 NKKSMLIPNCLFRVGCSAVLLSNK 308 (390)
Q Consensus 285 ~drs~lv~~~LFgDGAAAvLLs~~ 308 (390)
.++ ...++|||++++||+..
T Consensus 214 ~~~----~G~~~gEGaa~vVLe~~ 233 (392)
T PRK09185 214 ANR----DGINIGEAAAFFLLERE 233 (392)
T ss_pred CCC----CccceeceEEEEEEEEc
Confidence 112 25789999999999986
No 108
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.35 E-value=5.6e-06 Score=85.02 Aligned_cols=186 Identities=10% Similarity=0.170 Sum_probs=112.1
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcC--CCCCcchHHHHHHHH
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHA--IPPKPSMAAAREEAE 186 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~--~pp~~~~~~~~eea~ 186 (390)
+.|.|.|+|..-|-- .+.+++++.+..-. .-++...+ ++..+...+...... +. .....+.........
T Consensus 2 ~rVvITG~G~vsp~G---~~~~~~w~~l~~G~----sgi~~~~~-~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~r~~ 72 (406)
T PRK07967 2 RRVVITGLGIVSSIG---NNQQEVLASLREGR----SGITFSPE-FAEMGMRSQVWGNVK-LDPTGLIDRKVMRFMGDAS 72 (406)
T ss_pred CcEEEEcceEECCCC---CCHHHHHHHHHcCC----CceeECCc-ccccCCCCceEEEcC-CChhhcCCHHHhhcCCHHH
Confidence 579999999999973 57788888765310 00000000 112222222211110 00 000111111123356
Q ss_pred HHHHHHHHHHHHcCCCCCC-----CcCEEEEeecCC------------------C--------CCC-CHHHHHHHHcCCC
Q 016389 187 QVMYGALDNLFSNTNVNPK-----DIGILVVNCSLF------------------N--------PTP-SLSAMIVNKYRLR 234 (390)
Q Consensus 187 ~la~~Aa~~aL~kagi~p~-----dId~LIv~~s~~------------------~--------~~P-sla~~I~~~LgLr 234 (390)
.++..|++++|+++|++++ .+++++-.+... . ..| ..+..|...||++
T Consensus 73 ~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~ 152 (406)
T PRK07967 73 AYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIK 152 (406)
T ss_pred HHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCC
Confidence 7889999999999998754 344444322100 0 011 2667889999999
Q ss_pred CCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcCcc----------------------c-CCCccccc
Q 016389 235 GNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWY----------------------F-GNKKSMLI 291 (390)
Q Consensus 235 ~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~~~----------------------~-~~drs~lv 291 (390)
... +.++ .+|++++.||..|.++|+.+....+||.++|.++..+. + +.+|
T Consensus 153 Gp~--~tvs-~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r---- 225 (406)
T PRK07967 153 GVN--YSIS-SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANR---- 225 (406)
T ss_pred CCc--cccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCC----
Confidence 654 4555 49999999999999999999999999999986543211 0 0012
Q ss_pred ccccccCCceEEEeecccc
Q 016389 292 PNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 292 ~~~LFgDGAAAvLLs~~~~ 310 (390)
...+.|+||++++|+..+.
T Consensus 226 ~G~v~gEGaa~lvLe~~~~ 244 (406)
T PRK07967 226 DGFVIAGGGGVVVVEELEH 244 (406)
T ss_pred CceeeeceEEEEEEeeHHH
Confidence 2568899999999987543
No 109
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.33 E-value=2.7e-06 Score=87.97 Aligned_cols=95 Identities=17% Similarity=0.238 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCC-CCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHh
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFN-PTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~-~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
...+|+.+|++++|+++|++++|||.+|+.+.... ..+..+..+.-..|++..+..+.++ ++|++|+.++..|.+.++
T Consensus 30 ~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~-~~CaSG~~ai~~A~~~I~ 108 (427)
T PRK09268 30 SNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQ-QACGTGLEAAILVANKIA 108 (427)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeee-chhhHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999875421 1233555555556676567888887 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCc
Q 016389 263 VNWNTYAVVVSTENITQ 279 (390)
Q Consensus 263 a~~~~~aLVVstE~~S~ 279 (390)
++....+||++.|.+|.
T Consensus 109 sG~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 109 LGQIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCCCEEEEeeEEccCC
Confidence 99999999999998874
No 110
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.32 E-value=6.4e-06 Score=83.95 Aligned_cols=170 Identities=12% Similarity=0.184 Sum_probs=106.6
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCcee-e--ecCCCcCCCCCcchHHHHHHH
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEET-Y--FPEAMHAIPPKPSMAAAREEA 185 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~-~--~p~~~~~~pp~~~~~~~~eea 185 (390)
++|.|.|+|..-|- - . .+++.+.+..- ++||+.-+ | .|...... ..... ...
T Consensus 2 ~rVvITG~G~vsp~--G-~-~~~~~~~l~~G----------------~sgi~~~~~~~~~~~~~~~~-~~~~~----~~~ 56 (381)
T PRK05952 2 MKVVVTGIGLVSAL--G-D-LEQSWQRLLQG----------------KSGIKLHQPFPELPPLPLGL-IGNQP----SSL 56 (381)
T ss_pred CeEEEEeeEEECcc--c-C-HHHHHHHHHcC----------------CCCeEeCCccccccccccee-ecccc----ccc
Confidence 46999999999997 3 3 67887766431 23444211 1 00000000 00000 012
Q ss_pred HHHHHHHHHHHHHcCCCCC--CCcCEEEEeecCC--------------------C--------CCC-CHHHHHHHHcCCC
Q 016389 186 EQVMYGALDNLFSNTNVNP--KDIGILVVNCSLF--------------------N--------PTP-SLSAMIVNKYRLR 234 (390)
Q Consensus 186 ~~la~~Aa~~aL~kagi~p--~dId~LIv~~s~~--------------------~--------~~P-sla~~I~~~LgLr 234 (390)
..++..|++++|+++|+++ +++++++-.+... . ..| ..+..|...+|++
T Consensus 57 ~~~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~ 136 (381)
T PRK05952 57 EDLTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQ 136 (381)
T ss_pred cHHHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCC
Confidence 2355688999999999964 5566555322110 0 112 2466788899999
Q ss_pred CCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEecc-CCcC----c-----------ccCC-Cccccccccccc
Q 016389 235 GNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTEN-ITQN----W-----------YFGN-KKSMLIPNCLFR 297 (390)
Q Consensus 235 ~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~-~S~~----~-----------~~~~-drs~lv~~~LFg 297 (390)
.. ++.+.+ +|++++.||..|.++|+.+..+.+||.++|. .+.. + ++-+ ++ ...++|
T Consensus 137 Gp--~~ti~~-aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r----~G~v~g 209 (381)
T PRK05952 137 GP--VLAPMA-ACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQR----EGLVLG 209 (381)
T ss_pred Cc--cccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCC----CCcccc
Confidence 64 455654 9999999999999999999999999999995 4321 0 1111 22 257899
Q ss_pred CCceEEEeecccc
Q 016389 298 VGCSAVLLSNKRK 310 (390)
Q Consensus 298 DGAAAvLLs~~~~ 310 (390)
|||++++|+..+.
T Consensus 210 EGaa~lvLe~~~~ 222 (381)
T PRK05952 210 EGGAILVLESAEL 222 (381)
T ss_pred ccEEEEEEeeHHH
Confidence 9999999997653
No 111
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=98.31 E-value=2.5e-06 Score=86.72 Aligned_cols=94 Identities=13% Similarity=0.220 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCC-CC-CCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLF-NP-TPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~-~~-~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL 261 (390)
...+|+.+|++++|+++|++++|||.+|+.+... .. .+.++..+.-..|++..+..+.++ .||+++..++..|.+.+
T Consensus 25 ~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~-~acaSg~~Av~~Aa~~I 103 (382)
T PRK07801 25 HPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVD-RQCGSSQQAIHFAAQAV 103 (382)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeec-chhhhHHHHHHHHHHHH
Confidence 4588999999999999999999999999875421 11 122333333357776567778887 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCC
Q 016389 262 QVNWNTYAVVVSTENIT 278 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~S 278 (390)
+++..+.+||++.|.+|
T Consensus 104 ~sG~~d~vLv~G~e~ms 120 (382)
T PRK07801 104 MSGTQDLVVAGGVQNMS 120 (382)
T ss_pred HCCCCCEEEEcchhhhc
Confidence 99999999999999654
No 112
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.17 E-value=3.6e-05 Score=78.94 Aligned_cols=186 Identities=15% Similarity=0.104 Sum_probs=111.8
Q ss_pred CCCeEEEEEeEEeCCCCCccCHHHHHHHHhhcC---CCCcchHHHHHHHHHHcCCCceeeecCCCc--CCCCCcchHHHH
Q 016389 108 PRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTG---DFDESSLEFQRKILERSGLGEETYFPEAMH--AIPPKPSMAAAR 182 (390)
Q Consensus 108 ~~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~---~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~--~~pp~~~~~~~~ 182 (390)
+++|.|.|+|+--|-- .+.+++.+.+..-. .++..... . ..++ ..++-.+ +.+.. ......
T Consensus 5 ~~rVvITGiG~vsp~G---~~~e~~w~aL~~G~sg~~~~~~~~~---~--~~~~-----~~~~~~~~~~~~~~-~~~r~~ 70 (398)
T PRK06519 5 PNDVVITGIGLVSSLG---EGLDAHWNALSAGRPQPNVDTETFA---P--YPVH-----PLPEIDWSQQIPKR-GDQRQM 70 (398)
T ss_pred CCCEEEEcceEECCCC---CCHHHHHHHHHcCCCCCCCCccccc---C--cCcc-----cccccChhhcCCch-hhhhcc
Confidence 5689999999999973 57889888775321 11110000 0 0000 0000000 01111 011111
Q ss_pred HHHHHHHHHHHHHHHHcCCCCC-----CCcCEEEEeecCCC-----------------------------CCC-------
Q 016389 183 EEAEQVMYGALDNLFSNTNVNP-----KDIGILVVNCSLFN-----------------------------PTP------- 221 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p-----~dId~LIv~~s~~~-----------------------------~~P------- 221 (390)
.....++..|++++|+++|+++ +++++++-++.... ..|
T Consensus 71 ~r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 150 (398)
T PRK06519 71 ETWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQL 150 (398)
T ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhh
Confidence 3456789999999999999854 35555554432110 112
Q ss_pred --CHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEecc-CCcC---------c------cc
Q 016389 222 --SLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTEN-ITQN---------W------YF 283 (390)
Q Consensus 222 --sla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~-~S~~---------~------~~ 283 (390)
..+..|...+|++... +.++. +|++++.||..|.++|+.+..+.+||.++|. .+.. + .+
T Consensus 151 ~n~~a~~is~~~gl~Gp~--~ti~~-acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p 227 (398)
T PRK06519 151 SNLLAGNISIVHKVTGSS--RTFMG-EESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAP 227 (398)
T ss_pred hhHHHHHHHHHhCCCCcc--ccccC-CccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCc
Confidence 2566788899999644 55554 9999999999999999999999999999986 2220 0 00
Q ss_pred CCCcc-cccccccccCCceEEEeecccc
Q 016389 284 GNKKS-MLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 284 ~~drs-~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
..++. .-=...+.|+||++++|+..+.
T Consensus 228 ~~d~~~~~r~G~v~GEGAa~lvLE~~~~ 255 (398)
T PRK06519 228 VWSRGGEDGGGFILGSGGAFLVLESREH 255 (398)
T ss_pred hhccCccCCCCeeeeceEEEEEEeeHHH
Confidence 00110 0012567899999999998654
No 113
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.16 E-value=9.7e-05 Score=76.21 Aligned_cols=191 Identities=8% Similarity=-0.027 Sum_probs=113.1
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcC-CCCcchHHHHHHHHHHcCCCcee--eecCCCcCCCCCcchHHHHHHH
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTG-DFDESSLEFQRKILERSGLGEET--YFPEAMHAIPPKPSMAAAREEA 185 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~-~~~~~~~~~~~rI~~rsGI~~R~--~~p~~~~~~pp~~~~~~~~eea 185 (390)
++|.|.|+|+..|-- .+.++|.+.+..-. ...+-. ++-.++.++..+. .++. .+.....++........
T Consensus 12 ~~VvItGig~~sp~g---~~~~~~w~~L~~G~s~i~~~~----~~~~~~~~~~~~~~g~i~~-~~d~~~~~~~~~~~d~~ 83 (418)
T PRK07910 12 PNVVVTGIAMTTALA---TDAETTWKLLLDGQSGIRTLD----DPFVEEFDLPVRIGGHLLE-EFDHQLTRVELRRMSYL 83 (418)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHcCCCeeEeCC----hhhhhccCCCcceEEEecc-CccccCCHHHHhhccHH
Confidence 589999999999973 57899998875321 011000 0001122222221 1111 11100111111112345
Q ss_pred HHHHHHHHHHHHHcCCC---CCCCcCEEEEeecCCC-------------------------CCC-CHHHHHHHHcCCCCC
Q 016389 186 EQVMYGALDNLFSNTNV---NPKDIGILVVNCSLFN-------------------------PTP-SLSAMIVNKYRLRGN 236 (390)
Q Consensus 186 ~~la~~Aa~~aL~kagi---~p~dId~LIv~~s~~~-------------------------~~P-sla~~I~~~LgLr~~ 236 (390)
..++..|+.++|+++|+ ++++++++|-.+.... ..| ..+..|...+|++..
T Consensus 84 ~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G~ 163 (418)
T PRK07910 84 QRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKAG 163 (418)
T ss_pred HHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCCCC
Confidence 66899999999999995 5666766553331110 011 255667788888865
Q ss_pred ceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccC-CcC-----------ccc----CCCccc----ccccccc
Q 016389 237 IRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENI-TQN-----------WYF----GNKKSM----LIPNCLF 296 (390)
Q Consensus 237 v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~-S~~-----------~~~----~~drs~----lv~~~LF 296 (390)
. +.++ .+|++++.||..|.++|+.+....++|.++|.. +.. ... .+.... -=...++
T Consensus 164 ~--~ti~-taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~~G~v~ 240 (418)
T PRK07910 164 V--ITPV-SACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVF 240 (418)
T ss_pred c--cccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCCCCEee
Confidence 4 4444 489999999999999999999999999999873 211 100 000000 0126789
Q ss_pred cCCceEEEeecccc
Q 016389 297 RVGCSAVLLSNKRK 310 (390)
Q Consensus 297 gDGAAAvLLs~~~~ 310 (390)
|+|++++||++.+.
T Consensus 241 gEGaa~vvLe~~~~ 254 (418)
T PRK07910 241 GEGGALMVIETEEH 254 (418)
T ss_pred eceEEEEEEeeHHH
Confidence 99999999997653
No 114
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.08 E-value=2e-05 Score=81.20 Aligned_cols=120 Identities=11% Similarity=0.171 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHHcCCCC-CCCcCE----EEEeecCCCC------------------CC---------CHHHHHHHHc
Q 016389 184 EAEQVMYGALDNLFSNTNVN-PKDIGI----LVVNCSLFNP------------------TP---------SLSAMIVNKY 231 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~-p~dId~----LIv~~s~~~~------------------~P---------sla~~I~~~L 231 (390)
...+++..|++++|+++|++ +++++. +++.++.... .| ..+..|...+
T Consensus 76 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 155 (421)
T PTZ00050 76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH 155 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence 45789999999999999998 666543 2232221100 01 1456678888
Q ss_pred CCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCC-cC--------------c--cc-------CCCc
Q 016389 232 RLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENIT-QN--------------W--YF-------GNKK 287 (390)
Q Consensus 232 gLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S-~~--------------~--~~-------~~dr 287 (390)
|++..+ +.++ .+|++++.||..|.++|+.+....+||.++|..+ .. + .+ +.++
T Consensus 156 ~l~Gp~--~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~ 232 (421)
T PTZ00050 156 KLKGPS--GSAV-TACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR 232 (421)
T ss_pred CCCCcc--cccc-cHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC
Confidence 998654 4455 4899999999999999999999999999999632 10 0 00 0112
Q ss_pred ccccccccccCCceEEEeecccc
Q 016389 288 SMLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 288 s~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
...+.||||+|+||+..+.
T Consensus 233 ----~G~~~gEGAaalvLe~~~~ 251 (421)
T PTZ00050 233 ----AGFVMGEGAGILVLEELEH 251 (421)
T ss_pred ----CCEeeccceEEEEEeeHHH
Confidence 2568899999999997653
No 115
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.01 E-value=2.8e-05 Score=81.93 Aligned_cols=93 Identities=14% Similarity=0.076 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHcCCCC--CCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNTNVN--PKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~--p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL 261 (390)
+..+|+.+|++++++++|++ ++|||.+++..............+++++|+.+. ..... ..||+++..++..|...+
T Consensus 26 s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p~-~~~~~-~~GG~s~~~~v~~Aa~~I 103 (498)
T PRK08257 26 EPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADPA-RTVYS-PVGGNSPQRLVNEAALRI 103 (498)
T ss_pred CHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCCc-ceeEe-cCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999 999999987543222222345789999999753 44444 368999999999999999
Q ss_pred hcCCCCeEEEEEeccCC
Q 016389 262 QVNWNTYAVVVSTENIT 278 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~S 278 (390)
+++..+.|||++.|..+
T Consensus 104 asG~advVLv~G~E~~~ 120 (498)
T PRK08257 104 AAGEADVALVAGAEAQS 120 (498)
T ss_pred HCCCCCEEEEeeeeecc
Confidence 99999999999999753
No 116
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.01 E-value=2.1e-05 Score=80.47 Aligned_cols=89 Identities=11% Similarity=0.031 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhc
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a 263 (390)
+..+|+.+|++++|+++|++++|||.+++.+.. .+.....+++.+|+++ ....++. .||+++..++..|...+++
T Consensus 24 ~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~~~~~~~~lGl~~-~~~~~v~-~gg~s~~~a~~~A~~~I~s 98 (388)
T PRK08142 24 SVAQLHAEVAKGALADAGLSLADVDGYFCAGDA---PGLGPASMVDYLGLKL-RHVDSTE-TGGSSYLAHVGHAAQAIAA 98 (388)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC---CCccHHHHHHhCCCCC-eeecccc-CCcHHHHHHHHHHHHHHHc
Confidence 347899999999999999999999998753221 1111245889999974 5667776 5999999999999999999
Q ss_pred CCCCeEEEEEeccC
Q 016389 264 NWNTYAVVVSTENI 277 (390)
Q Consensus 264 ~~~~~aLVVstE~~ 277 (390)
+..+.||||+.|..
T Consensus 99 G~~d~vLvvg~e~~ 112 (388)
T PRK08142 99 GKCSVALITLAGRP 112 (388)
T ss_pred CCCCEEEEEeeeec
Confidence 99999999999864
No 117
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=97.97 E-value=3.7e-05 Score=77.95 Aligned_cols=91 Identities=15% Similarity=0.159 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhc
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a 263 (390)
.+.+|+..|++++++ |++ +|||.+|+.+.... .+..+..+....|++..+..+.++ .+|++|..++..|.+.+++
T Consensus 24 ~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~-~~CaSG~~Ai~~a~~~I~s 98 (361)
T PRK06690 24 EVQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTID-RQCGAGLEAIRTACHFIQG 98 (361)
T ss_pred CHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehh-hhhhHHHHHHHHHHHHHHC
Confidence 468899999999866 896 89999999765422 244555688999998678999998 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCc
Q 016389 264 NWNTYAVVVSTENITQ 279 (390)
Q Consensus 264 ~~~~~aLVVstE~~S~ 279 (390)
+....+|+++.|.+|.
T Consensus 99 G~~d~~l~gG~E~ms~ 114 (361)
T PRK06690 99 GAGKCYIAGGVESTST 114 (361)
T ss_pred CCCCEEEEeccccccC
Confidence 9999999999998874
No 118
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=97.94 E-value=7.5e-05 Score=75.13 Aligned_cols=119 Identities=12% Similarity=0.131 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHcCCC--CCCCcCEEEEeecCC-----------------CCCC---------CHHHHHHHHcCCCCC
Q 016389 185 AEQVMYGALDNLFSNTNV--NPKDIGILVVNCSLF-----------------NPTP---------SLSAMIVNKYRLRGN 236 (390)
Q Consensus 185 a~~la~~Aa~~aL~kagi--~p~dId~LIv~~s~~-----------------~~~P---------sla~~I~~~LgLr~~ 236 (390)
...++..|++++++++|+ +++++++++-.+... ...| ..+..|...+|++..
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~Gp 83 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKGP 83 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCCC
Confidence 467888999999999995 777887777443111 0112 266778889999975
Q ss_pred ceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcC-----cc------------------c-CCCcccccc
Q 016389 237 IRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQN-----WY------------------F-GNKKSMLIP 292 (390)
Q Consensus 237 v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~-----~~------------------~-~~drs~lv~ 292 (390)
. +-++ .+|++++.||..|.++++.+..+.+||.++|..... |+ + +.+| .
T Consensus 84 ~--~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r----~ 156 (342)
T PRK14691 84 I--GAPV-TACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTAR----D 156 (342)
T ss_pred c--cccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCC----C
Confidence 4 4555 489999999999999999999999999999863211 00 0 0112 2
Q ss_pred cccccCCceEEEeecccc
Q 016389 293 NCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 293 ~~LFgDGAAAvLLs~~~~ 310 (390)
..++||||+++||+..+.
T Consensus 157 G~v~gEGAa~lvLes~~~ 174 (342)
T PRK14691 157 GFVMGEGAGLLIIEELEH 174 (342)
T ss_pred CccccceEEEEEEeeHHH
Confidence 578999999999997653
No 119
>PRK07855 lipid-transfer protein; Provisional
Probab=97.87 E-value=5.5e-05 Score=77.26 Aligned_cols=85 Identities=13% Similarity=0.084 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcC
Q 016389 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (390)
Q Consensus 185 a~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~ 264 (390)
..+|+.+|++++|+++|++++|||.+++++. . ..+. ..+++.+|+++-....++. .||+++..++..|...++++
T Consensus 24 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~-~~~~--~~l~~~lGl~~~~~~~~v~-~gg~sg~~~~~~A~~~I~sG 98 (386)
T PRK07855 24 ELRLACEAVLAALDDAGLAPSDVDGLVTFTM-D-TNPE--IAVARALGIGELKFFSRIH-YGGGAACATVQQAAMAVATG 98 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-c-cccH--HHHHHHCCCCCCcceeeec-CCcHHHHHHHHHHHHHHHCC
Confidence 4789999999999999999999999987432 2 1222 4588999997522334665 59999999999999999999
Q ss_pred CCCeEEEEEe
Q 016389 265 WNTYAVVVST 274 (390)
Q Consensus 265 ~~~~aLVVst 274 (390)
..+.|||+++
T Consensus 99 ~~d~vLv~g~ 108 (386)
T PRK07855 99 VADVVVCYRA 108 (386)
T ss_pred CCCEEEEEee
Confidence 9999999987
No 120
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.68 E-value=0.0023 Score=66.04 Aligned_cols=124 Identities=14% Similarity=0.188 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCC-CCCcC--EEE-EeecC-CC--------------C------------CC-CHHHHHH
Q 016389 181 AREEAEQVMYGALDNLFSNTNVN-PKDIG--ILV-VNCSL-FN--------------P------------TP-SLSAMIV 228 (390)
Q Consensus 181 ~~eea~~la~~Aa~~aL~kagi~-p~dId--~LI-v~~s~-~~--------------~------------~P-sla~~I~ 228 (390)
+.+....++..|+++|++++|++ ..+.+ +-+ +.++. +. + .| ..+..+.
T Consensus 67 ~~d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs 146 (412)
T COG0304 67 FMDRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVA 146 (412)
T ss_pred cccHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHH
Confidence 45677889999999999999998 33442 222 22221 00 0 12 2556677
Q ss_pred HHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEecc-C--------------Cc-------CcccCC-
Q 016389 229 NKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTEN-I--------------TQ-------NWYFGN- 285 (390)
Q Consensus 229 ~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~-~--------------S~-------~~~~~~- 285 (390)
..+|++.. .+.+++ .|+++..||..|.++++.+....+++.++|. + |. .+++.+
T Consensus 147 ~~~g~~G~--~~~~~t-ACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~ 223 (412)
T COG0304 147 IVFGLKGP--NYTPVT-ACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDK 223 (412)
T ss_pred HHhCCCCC--cCChhh-hHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCC
Confidence 88899864 455664 8999999999999999999999999999975 2 22 122222
Q ss_pred CcccccccccccCCceEEEeeccccc
Q 016389 286 KKSMLIPNCLFRVGCSAVLLSNKRKD 311 (390)
Q Consensus 286 drs~lv~~~LFgDGAAAvLLs~~~~~ 311 (390)
+|+ .+++|.||+++||+..+..
T Consensus 224 ~Rd----Gfv~gEGag~lVLE~~ehA 245 (412)
T COG0304 224 NRD----GFVIGEGAGALVLEELEHA 245 (412)
T ss_pred CCC----CEEEecceeEEEecChhhH
Confidence 344 6899999999999987643
No 121
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=97.67 E-value=0.00026 Score=72.42 Aligned_cols=90 Identities=10% Similarity=0.156 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHcCC-CCC-CCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNTN-VNP-KDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kag-i~p-~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~l 260 (390)
...+|+.+|++++|+++| +++ +|||.+++++.. +.........++..+|+.. ...+.+ |+++..++..|...
T Consensus 24 s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~-~~~~~v----~~sg~~a~~~A~~a 98 (385)
T PRK06066 24 SFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAM-RPTMTV----AGDGLQGLAHAVMH 98 (385)
T ss_pred CHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCC-CCeEEE----eCcHHHHHHHHHHH
Confidence 347899999999999999 998 799999874321 1111122334668899853 233443 78899999999999
Q ss_pred HhcCCCCeEEEEEeccCC
Q 016389 261 LQVNWNTYAVVVSTENIT 278 (390)
Q Consensus 261 L~a~~~~~aLVVstE~~S 278 (390)
++++..+.|||++.|..+
T Consensus 99 V~sG~~d~vLv~g~~~~~ 116 (385)
T PRK06066 99 INSGLANVVVVEAHSKPS 116 (385)
T ss_pred HHcCCCCEEEEEEEeecc
Confidence 999999999999998643
No 122
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=97.57 E-value=0.0022 Score=78.94 Aligned_cols=191 Identities=14% Similarity=0.180 Sum_probs=113.7
Q ss_pred CCCeEEEEEeEEeCCCCCccCHHHHHHHHhhcC-CCCcchHHHH--HHHHH-------HcCCCceeeecCCC-----cCC
Q 016389 108 PRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTG-DFDESSLEFQ--RKILE-------RSGLGEETYFPEAM-----HAI 172 (390)
Q Consensus 108 ~~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~-~~~~~~~~~~--~rI~~-------rsGI~~R~~~p~~~-----~~~ 172 (390)
..+|-|+|+||-.|.. -+.++|++.+.... ..++-..+.. ...+. ++-.+.-.++++-. +.+
T Consensus 6 ~~~IAIvGmg~~~P~a---~~~~~fW~~L~~G~~~i~~ip~~rw~~~~~~~~~~~~~~~~~~~~ggfl~~v~FD~~~F~i 82 (2582)
T TIGR02813 6 DMPIAIVGMASIFANS---RYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGGFLPEVDFNPMEFGL 82 (2582)
T ss_pred CCCEEEEeeeeeCCCC---CCHHHHHHHHHcCCCccCCCChhhCChhhccCccccccCCcccceeEecCccCCCHhhcCC
Confidence 4679999999999983 47788988775321 0111000000 00100 00000011222111 112
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHcCCCC----CCCcCEEEEeecCC-------------------------------
Q 016389 173 PPKPSMAAAREEAEQVMYGALDNLFSNTNVN----PKDIGILVVNCSLF------------------------------- 217 (390)
Q Consensus 173 pp~~~~~~~~eea~~la~~Aa~~aL~kagi~----p~dId~LIv~~s~~------------------------------- 217 (390)
||+ .....+-...++.+++.++|+++|+. .+.+++++-++...
T Consensus 83 ~p~--ea~~mDpqqrl~L~~a~eALedAG~~~~~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (2582)
T TIGR02813 83 PPN--ILELTDISQLLSLVVAKEVLNDAGLPDGYDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEM 160 (2582)
T ss_pred CHH--HHHhcCHHHHHHHHHHHHHHHhCCCCCCCCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHH
Confidence 321 11223445678999999999999984 34566665332210
Q ss_pred --------------CCCCC-----HHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccC-
Q 016389 218 --------------NPTPS-----LSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENI- 277 (390)
Q Consensus 218 --------------~~~Ps-----la~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~- 277 (390)
+..|+ .+.+|.++||+++.. +.+. -+|++++.||++|.+.|+.+....+|+-+++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~Gps--~tVd-tACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~ 237 (2582)
T TIGR02813 161 LIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMN--CVVD-AACAGSLAAIRMALSELLEGRSEMMITGGVCTDN 237 (2582)
T ss_pred hhhhhcccccccCccccccccccHHHHHHHHHhCCCCCc--cccc-chhHHHHHHHHHHHHHHHcCCCCEEEEecceeeC
Confidence 00122 577899999999754 5555 489999999999999999999999999887753
Q ss_pred CcCcc----------------cCCCcccccccccccCCceEEEeeccc
Q 016389 278 TQNWY----------------FGNKKSMLIPNCLFRVGCSAVLLSNKR 309 (390)
Q Consensus 278 S~~~~----------------~~~drs~lv~~~LFgDGAAAvLLs~~~ 309 (390)
+...+ +-|.+. ...++|+|+++++|.+-.
T Consensus 238 ~p~~~~~fs~~~~lS~~g~crpFD~~a---dG~v~GEGag~vvLkrL~ 282 (2582)
T TIGR02813 238 SPFMYMSFSKTPAFTTNEDIQPFDIDS---KGMMIGEGIGMMALKRLE 282 (2582)
T ss_pred CHHHHHHHHhccCcCCCCCccCCCCCC---CcccccceEEEEEeCcHH
Confidence 21111 111111 257899999999998644
No 123
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.39 E-value=0.00071 Score=69.33 Aligned_cols=98 Identities=16% Similarity=0.262 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHHcC--CCCCCCcCEEEEeecC--CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNT--NVNPKDIGILVVNCSL--FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKD 259 (390)
Q Consensus 184 ea~~la~~Aa~~aL~ka--gi~p~dId~LIv~~s~--~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~ 259 (390)
.++++.....+..+++. ++++.+||.+|..|.. +...+..+..++...|++.++..+.++ .+|++|+.++.+|.+
T Consensus 26 ~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~-~~c~SG~~Av~~A~~ 104 (392)
T COG0183 26 AAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVN-RACASGLAAVRLAAQ 104 (392)
T ss_pred CHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEe-ccchhHHHHHHHHHH
Confidence 34556666666666543 7888899999987654 334678888999999999778999998 599999999999999
Q ss_pred HHhcCCCCeEEEEEeccCCcCcc
Q 016389 260 LLQVNWNTYAVVVSTENITQNWY 282 (390)
Q Consensus 260 lL~a~~~~~aLVVstE~~S~~~~ 282 (390)
.++++....+|+++.|.+|...+
T Consensus 105 ~I~sG~~dvvlagG~E~mS~~~~ 127 (392)
T COG0183 105 AIASGEADVVLAGGVEKMSDAPM 127 (392)
T ss_pred HHHCCCCCEEEEEeeeeccCCCc
Confidence 99999999999999999997654
No 124
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=97.34 E-value=0.0031 Score=62.08 Aligned_cols=116 Identities=18% Similarity=0.256 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCC
Q 016389 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNW 265 (390)
Q Consensus 186 ~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~ 265 (390)
..|..+|++.+|+|+|++++|||.++-.-=..+.+ .+...++.|+++ -+.+.| +||-..-+|.+|.-++..+-
T Consensus 52 ~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i--~s~f~ar~l~iP----f~Glyg-ACST~~e~l~laa~~vdgg~ 124 (329)
T PF07451_consen 52 SKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQII--SSSFAARDLGIP----FLGLYG-ACSTMMESLALAAMLVDGGF 124 (329)
T ss_dssp HHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCC--HHHHHHHHHT------EEEB---CCCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhH--HHHHHHHhcCCC----ccchhh-HHHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999998765555543 456778888764 478887 89999999999999999998
Q ss_pred CCeEEEEEec-cCCc--Cccc----CCCcccccccccccCCceEEEeecccc
Q 016389 266 NTYAVVVSTE-NITQ--NWYF----GNKKSMLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 266 ~~~aLVVstE-~~S~--~~~~----~~drs~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
.+++|..++- ++|. .|++ |..|. .+.-.---||+|+||++...
T Consensus 125 a~~vla~tSSH~~tAERQfR~P~EyG~Qrp--~tAqwTVTGaGa~il~~~~~ 174 (329)
T PF07451_consen 125 ADYVLAATSSHFATAERQFRFPTEYGGQRP--PTAQWTVTGAGAAILSKEGS 174 (329)
T ss_dssp -SEEEEEEEE-CCHHHHHT---GGGT------TT--EE--EEEEEEEESS--
T ss_pred cceEEEEeccccchhhhhccCchhccCCCC--CcccEEEeceEEEEEecCCC
Confidence 8999888654 3432 3332 22221 12344567899999997764
No 125
>PRK07937 lipid-transfer protein; Provisional
Probab=97.30 E-value=0.0012 Score=66.80 Aligned_cols=89 Identities=12% Similarity=0.042 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcC
Q 016389 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (390)
Q Consensus 186 ~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~ 264 (390)
.+|+.+|++++|+++|++++|||.++..++. ....+.....+...+|+.+......+ |++|..++..|...++++
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v----~~~g~~a~~~A~~aI~sG 100 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSSDYLAGRAFSFISAIDSIGAVPPINESHV----EMDAAWALYEAWVKLLTG 100 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEccccccccccchhhHHhhccCCCCCceEEe----cCcHHHHHHHHHHHHhcC
Confidence 6899999999999999999999988643331 11111112345577887544444443 346778999999999999
Q ss_pred CCCeEEEEEeccCC
Q 016389 265 WNTYAVVVSTENIT 278 (390)
Q Consensus 265 ~~~~aLVVstE~~S 278 (390)
..++|||++.|..+
T Consensus 101 ~~d~VLv~g~~k~~ 114 (352)
T PRK07937 101 EVDTALVYGFGKSS 114 (352)
T ss_pred CCCEEEEEEecccC
Confidence 99999999999654
No 126
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.18 E-value=0.0059 Score=70.02 Aligned_cols=188 Identities=16% Similarity=0.179 Sum_probs=114.0
Q ss_pred CCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCC----CCcchHHHHHHHHHHcCC-----Cceeee------c------C
Q 016389 109 RPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGD----FDESSLEFQRKILERSGL-----GEETYF------P------E 167 (390)
Q Consensus 109 ~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~----~~~~~~~~~~rI~~rsGI-----~~R~~~------p------~ 167 (390)
.+|-|+|++|.+|.- -+.++|++.+..-.. ++++ +|=++..+- ..++|. . +
T Consensus 4 ~~IAIiGm~~rfPga---~~~~~~W~~l~~g~~~i~~ip~~-----rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~ 75 (1061)
T COG3321 4 EPIAIIGMACRFPGA---DSPEEFWDLLKEGRDEITEVPAD-----RWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDA 75 (1061)
T ss_pred CcEEEEeccccCCCC---CCHHHHHHHHhcCCceeeecChh-----hhhHhhccCCccccccccccccccccCCccccCH
Confidence 349999999999993 478999998875311 1111 122222222 222222 1 1
Q ss_pred CCcCCCCCcchHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCE----EEEeec-CCCCCCC-------------------H
Q 016389 168 AMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGI----LVVNCS-LFNPTPS-------------------L 223 (390)
Q Consensus 168 ~~~~~pp~~~~~~~~eea~~la~~Aa~~aL~kagi~p~dId~----LIv~~s-~~~~~Ps-------------------l 223 (390)
..|.++| +..+..+--..|.-+.+-++|+++|+.|+.+.. +...++ .++.... .
T Consensus 76 ~fFgisP--rEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~ 153 (1061)
T COG3321 76 LFFGISP--REAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVA 153 (1061)
T ss_pred HHcCCCH--HHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHH
Confidence 1111222 333333445568899999999999999988874 444433 3333221 6
Q ss_pred HHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccC-CcCccc-----------CCC--ccc
Q 016389 224 SAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENI-TQNWYF-----------GNK--KSM 289 (390)
Q Consensus 224 a~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~-S~~~~~-----------~~d--rs~ 289 (390)
+.+|...|++++.. +.+. -+||+.+.|+++|.+-|+.+....||+=+..+. +...+. ++- -+.
T Consensus 154 a~Risy~l~l~GPs--~~vd-taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~ 230 (1061)
T COG3321 154 AGRISYVLGLSGPS--VTVD-TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDA 230 (1061)
T ss_pred HHHHHHHhcCCCCC--cccc-chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceeccc
Confidence 77888999999754 5554 489999999999999999998776666544332 111110 000 000
Q ss_pred ccccccccCCceEEEeeccc
Q 016389 290 LIPNCLFRVGCSAVLLSNKR 309 (390)
Q Consensus 290 lv~~~LFgDGAAAvLLs~~~ 309 (390)
--..+.+|.|+++++|..-.
T Consensus 231 ~adG~v~geG~g~vvLKrl~ 250 (1061)
T COG3321 231 DADGYVRGEGAGVVVLKRLS 250 (1061)
T ss_pred CCCCEEEeeeEEEEEEEEhH
Confidence 01246899999999997643
No 127
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=96.93 E-value=0.0022 Score=63.36 Aligned_cols=98 Identities=16% Similarity=0.125 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeec-CCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s-~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL 261 (390)
-.+.+|+.-|++.+|++++++|+|++-+|..+- .-+.--..+...+=--||+.++.+..++ +.|++|+.|+-+|.+-+
T Consensus 28 l~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvN-kvCaSgmKAv~laaQsI 106 (396)
T KOG1390|consen 28 LTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVN-KVCASGMKAVILAAQSI 106 (396)
T ss_pred CchhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeeh-hhhhhhHHHHHHHHHHH
Confidence 357899999999999999999999998985541 1111112344444455788889999998 89999999999999999
Q ss_pred hcCCCCeEEEEEeccCCcCc
Q 016389 262 QVNWNTYAVVVSTENITQNW 281 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~S~~~ 281 (390)
+.+-...++.-++|.+|..-
T Consensus 107 ~~G~~divVaGGmEsMS~vP 126 (396)
T KOG1390|consen 107 QTGHADIVVAGGMESMSNVP 126 (396)
T ss_pred hcCCccEEEecccchhccCc
Confidence 99988989999999998644
No 128
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=96.75 E-value=0.0021 Score=62.16 Aligned_cols=90 Identities=14% Similarity=0.273 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCC
Q 016389 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNW 265 (390)
Q Consensus 186 ~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~ 265 (390)
+|++.+|+.++|++++++-+||+--++.---+.. ....+-+-++||. .|.-||++. .|+.|-.||-+|+++++++.
T Consensus 30 pd~a~ea~tkal~da~ikys~vqqa~vgyvfgds--tcgqraiyevgmt-gipi~nvnn-ncatgssalflakqiiesgn 105 (408)
T KOG1406|consen 30 PDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDS--TCGQRAIYEVGMT-GIPIYNVNN-NCATGSSALFLAKQIIESGN 105 (408)
T ss_pred chHHHHHHHHHHHhcCCCHHHHHhhhheeeecCC--ccchHHHHhcccc-CcceeeccC-ccccCchHHHHHHHHHhcCC
Confidence 6899999999999999999998866543211111 1123445689997 699999985 89999999999999999998
Q ss_pred CCeEEEEEeccCCc
Q 016389 266 NTYAVVVSTENITQ 279 (390)
Q Consensus 266 ~~~aLVVstE~~S~ 279 (390)
...||..+-|.+++
T Consensus 106 ~dcvlalgfekm~~ 119 (408)
T KOG1406|consen 106 SDCVLALGFEKMER 119 (408)
T ss_pred cceEEeechhhhCC
Confidence 89999999998765
No 129
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=96.26 E-value=0.0064 Score=48.81 Aligned_cols=75 Identities=13% Similarity=0.167 Sum_probs=49.6
Q ss_pred HHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEe---cCCccchhHHHHHHHHHHHHhcCCCCeEEEEE
Q 016389 197 FSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYN---LGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVS 273 (390)
Q Consensus 197 L~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~d---l~gmGCsggl~aL~lA~~lL~a~~~~~aLVVs 273 (390)
|+++|++++|||++|..-. .......+.+++|++++-...+ .+.+||+.-+++|..+.+-=+..++.++|+++
T Consensus 1 L~~~g~~~~did~~i~hq~----~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQA----SKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-SS----SHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCCC----CHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 6899999999999997642 2345556899999986643333 34578888888887766644445788999997
Q ss_pred ec
Q 016389 274 TE 275 (390)
Q Consensus 274 tE 275 (390)
.-
T Consensus 77 ~G 78 (90)
T PF08541_consen 77 FG 78 (90)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 130
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=95.54 E-value=0.078 Score=53.93 Aligned_cols=92 Identities=15% Similarity=0.133 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHc-----CCCCCcee---EecCCccchhHHHH
Q 016389 182 REEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKY-----RLRGNIRS---YNLGGMGCSAGVIA 253 (390)
Q Consensus 182 ~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~L-----gLr~~v~~---~dl~gmGCsggl~a 253 (390)
.+.......++++++|++.|++++|||++|.+ ++.+.+-..+.++| |++++-.. -..++++|++..++
T Consensus 267 ~~~~~~~~~~~i~~~L~~~gl~~~DId~~v~H----q~n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~ 342 (378)
T PRK06816 267 NENIVVYTIKPLLELVDKRNLDPDDIDYFLPH----YSSEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIM 342 (378)
T ss_pred HHHhHHHHHHHHHHHHHHcCCChhhCCEEeeC----cccHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHH
Confidence 34555666889999999999999999999854 34455666788887 78754211 14466788888888
Q ss_pred HHHHHHHHhcCCCCeEEEEEeccC
Q 016389 254 VDLAKDLLQVNWNTYAVVVSTENI 277 (390)
Q Consensus 254 L~lA~~lL~a~~~~~aLVVstE~~ 277 (390)
|..|.+-=+-.++.++++.+.|.-
T Consensus 343 L~~a~~~g~~~~Gd~vl~~~~~s~ 366 (378)
T PRK06816 343 LDELLNSGRLKPGQKILCFVPESG 366 (378)
T ss_pred HHHHHHcCCCCCCCEEEEEEeccc
Confidence 876643212235788888877754
No 131
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=95.09 E-value=0.06 Score=55.78 Aligned_cols=91 Identities=13% Similarity=0.243 Sum_probs=66.6
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCc--------cchhHHHHHHHHHHHH
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGM--------GCSAGVIAVDLAKDLL 261 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gm--------GCsggl~aL~lA~~lL 261 (390)
..|++++|+++|++++|||.+..+- ..+......++++|++.+ .+|.+|- |++|....+.+.+++.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~e----aFa~~~l~~~~~lg~~~~--~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINE----AFAVVAEKFIRDLDLDRD--KVNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEch----HHHHHHHHHHHHcCCChh--hccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 4799999999999999999998662 223445577889998753 4666663 7888888888888887
Q ss_pred hcCCCCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeec
Q 016389 262 QVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSN 307 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~ 307 (390)
+.+ .++.|+ +.|..|-.|+|+||++
T Consensus 392 ~~g-~~~Gl~--------------------~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 392 RRG-LKRGLV--------------------TMCAAGGMAPAIIIER 416 (417)
T ss_pred HhC-CCeEEE--------------------EEEeeccceeEEEEEe
Confidence 644 344432 3466777778888875
No 132
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=94.97 E-value=0.09 Score=52.82 Aligned_cols=82 Identities=13% Similarity=0.138 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCcee--E---ecCCccchhHHHHHHHHHHH
Q 016389 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS--Y---NLGGMGCSAGVIAVDLAKDL 260 (390)
Q Consensus 186 ~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~--~---dl~gmGCsggl~aL~lA~~l 260 (390)
...+.++++++|+++|++++|||.+|+.- +.+.+-..+.++||++++-.. + +.+++|+++-..+|.-+..
T Consensus 207 ~~~~~~~~~~~L~~~gl~~~did~~i~Hq----~~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~- 281 (345)
T TIGR00748 207 FHHVVTAAKGLMEKLGLTPEDFDYAVFHQ----PNGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD- 281 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEeCC----CChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH-
Confidence 44455889999999999999999998753 334456678999999854211 1 5677889999988877654
Q ss_pred HhcCCCCeEEEEE
Q 016389 261 LQVNWNTYAVVVS 273 (390)
Q Consensus 261 L~a~~~~~aLVVs 273 (390)
+..++.++|+++
T Consensus 282 -~~~~Gd~vll~~ 293 (345)
T TIGR00748 282 -IAEPGDRILAVS 293 (345)
T ss_pred -hcCCCCEEEEEE
Confidence 333556666664
No 133
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=94.83 E-value=0.083 Score=52.19 Aligned_cols=88 Identities=14% Similarity=0.205 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeE---ecCCccchhHHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSY---NLGGMGCSAGVIAVDLAKD 259 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~---dl~gmGCsggl~aL~lA~~ 259 (390)
+.+.+...++++++|+++|++++|||+++.+ ++.+.+-..+.+++|++++-... +.+.+|++.-..+|+.+..
T Consensus 223 ~~~~~~~~~~~~~~L~~~gl~~~did~~~~h----~~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~~~ 298 (326)
T PRK05963 223 TEAVRMMSGASQNVLASAAMTPQDIDRFFPH----QANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLANL 298 (326)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeC----CCCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHHHH
Confidence 4456667889999999999999999998873 33456777789999998553221 2344566666666654432
Q ss_pred HHhcCCCCeEEEEEe
Q 016389 260 LLQVNWNTYAVVVST 274 (390)
Q Consensus 260 lL~a~~~~~aLVVst 274 (390)
-=+..++.++|+++.
T Consensus 299 ~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 299 EQPLREGERLLFAAA 313 (326)
T ss_pred hCCCCCCCEEEEEEE
Confidence 111234678888875
No 134
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=94.46 E-value=0.14 Score=50.75 Aligned_cols=92 Identities=9% Similarity=0.092 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEe---cCCccchhHHHHHHHH
Q 016389 181 AREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYN---LGGMGCSAGVIAVDLA 257 (390)
Q Consensus 181 ~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~d---l~gmGCsggl~aL~lA 257 (390)
..++......++++++|+++|++++|||.+|++. ..+..-..+.+++|++++-...+ .+++|+++-+.+|+.+
T Consensus 233 ~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~----~~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~ 308 (338)
T PRK09258 233 LLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQ----VGAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMA 308 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCC----CCHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHH
Confidence 3445566777889999999999999999988664 23345668899999985432222 4556777777777655
Q ss_pred HHHHhcCCCCeEEEEEecc
Q 016389 258 KDLLQVNWNTYAVVVSTEN 276 (390)
Q Consensus 258 ~~lL~a~~~~~aLVVstE~ 276 (390)
.+-=+-.++.++|+++...
T Consensus 309 ~~~g~~~~Gd~vll~~~G~ 327 (338)
T PRK09258 309 AEEGFLKPGDRVALLGIGS 327 (338)
T ss_pred HHhCCCCCCCEEEEEEech
Confidence 3210123568888887653
No 135
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=94.46 E-value=0.068 Score=51.77 Aligned_cols=94 Identities=14% Similarity=0.155 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcC----CCCCceeEecCCccchhHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYR----LRGNIRSYNLGGMGCSAGVIAVDLAKD 259 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~Lg----Lr~~v~~~dl~gmGCsggl~aL~lA~~ 259 (390)
.+.++.+-|++.+|+.+++.++.+|++|+.-..-. .+-.-++.++.| .+.+..+..++- =|.+|+.++-.+.+
T Consensus 27 ~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aS--SsDgIYl~RHvGL~~GvP~e~pALtiNR-LCGSGFQsiVNgaQ 103 (396)
T KOG1391|consen 27 SATDLGVVAAKAALKAANVGAEAVDHVIMGNVLAS--SSDGIYLARHVGLRVGVPKETPALTINR-LCGSGFQSIVNGAQ 103 (396)
T ss_pred chhhHHHHHHHHHHhhcCCChhhcceEEEeeeeec--cCCceEeeeccccccCCcCccCceeehh-hhcccHHHHHhhHH
Confidence 56889999999999999999999999995431110 011223445555 455667888886 59999999999888
Q ss_pred HHhcCCCCeEEEEEeccCCcC
Q 016389 260 LLQVNWNTYAVVVSTENITQN 280 (390)
Q Consensus 260 lL~a~~~~~aLVVstE~~S~~ 280 (390)
-+..+...-+|.=++|++|..
T Consensus 104 ~I~vgea~ivL~GGtEnMSq~ 124 (396)
T KOG1391|consen 104 EICVGEAEIVLCGGTENMSQA 124 (396)
T ss_pred HhhcCcceEEEecCccccccC
Confidence 888887777888889999864
No 136
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=94.46 E-value=0.1 Score=51.18 Aligned_cols=88 Identities=14% Similarity=0.096 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeE---ecCCccchhHHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSY---NLGGMGCSAGVIAVDLAKD 259 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~---dl~gmGCsggl~aL~lA~~ 259 (390)
+.......++++++|+++|++++|||+++.+. +.+..-.++.+++|++++-... +.+.++|+.-+.+|+.+.+
T Consensus 215 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~~~~~ 290 (319)
T PRK09352 215 KFAVRELAKVAREALEAAGLTPEDIDWLVPHQ----ANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALDEAVR 290 (319)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHHHHHH
Confidence 34455577899999999999999999999753 3445667889999998642222 2444666666666654332
Q ss_pred HHhcCCCCeEEEEEe
Q 016389 260 LLQVNWNTYAVVVST 274 (390)
Q Consensus 260 lL~a~~~~~aLVVst 274 (390)
-=+..+++++|+++.
T Consensus 291 ~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 291 DGRIKRGDLVLLEGF 305 (319)
T ss_pred cCCCCCCCEEEEEEE
Confidence 101134678887764
No 137
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=94.09 E-value=0.14 Score=50.74 Aligned_cols=84 Identities=13% Similarity=0.137 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeE---ecCCccchhHHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSY---NLGGMGCSAGVIAVDLAKD 259 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~---dl~gmGCsggl~aL~lA~~ 259 (390)
+.+.....++++++|+++|++++|||.++.+-.. ...-..++++||++++-... ..+.++|+..+++|+-+
T Consensus 226 ~~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~~----~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~~-- 299 (329)
T PRK07204 226 KLSSKYLMKFIDKLLMDAGYTLADIDLIVPHQAS----GPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFEA-- 299 (329)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCC----HHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHHH--
Confidence 4556667789999999999999999999866432 12456889999998643221 23445555555566543
Q ss_pred HHhcC---CCCeEEEEE
Q 016389 260 LLQVN---WNTYAVVVS 273 (390)
Q Consensus 260 lL~a~---~~~~aLVVs 273 (390)
++.+ ++.++|+++
T Consensus 300 -~~~g~~~~Gd~vll~~ 315 (329)
T PRK07204 300 -IKQKKVQRGNKILLLG 315 (329)
T ss_pred -HHcCCCCCCCEEEEEE
Confidence 3333 467777775
No 138
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=93.94 E-value=0.19 Score=49.39 Aligned_cols=88 Identities=13% Similarity=0.167 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCce--eE-ecCCccchhHHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIR--SY-NLGGMGCSAGVIAVDLAKD 259 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~--~~-dl~gmGCsggl~aL~lA~~ 259 (390)
++..+...++++++|+++|++++|||+++.+. +.+..-..+++++|++.+-. .+ ..+.+||+.-+.+|.-+.+
T Consensus 215 ~~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~~~ 290 (318)
T TIGR00747 215 KHAVRKMGDVVEETLEANGLDPEDIDWFVPHQ----ANLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDELLR 290 (318)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHHHH
Confidence 34455567889999999999999999999643 34456778899999985311 11 2345666777777655433
Q ss_pred HHhcCCCCeEEEEEe
Q 016389 260 LLQVNWNTYAVVVST 274 (390)
Q Consensus 260 lL~a~~~~~aLVVst 274 (390)
-=+..++.++|+++.
T Consensus 291 ~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 291 TGRIKPGDLLLLVAF 305 (318)
T ss_pred cCCCCCCCEEEEEEE
Confidence 111234577887764
No 139
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=93.87 E-value=0.14 Score=50.02 Aligned_cols=88 Identities=14% Similarity=0.189 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEe---cCCccchhHHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYN---LGGMGCSAGVIAVDLAKD 259 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~d---l~gmGCsggl~aL~lA~~ 259 (390)
+...+...++++++|++.|++++|||.++... +.+..-..+.+++|++++-...+ .+.+|++.-+.+|+-+.+
T Consensus 219 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~~~ 294 (320)
T cd00830 219 KFAVRLMPESIEEALEKAGLTPDDIDWFVPHQ----ANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEAIE 294 (320)
T ss_pred HHHHHhhHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHHHH
Confidence 45567778999999999999999999998763 24455667899999975422222 345666666666655432
Q ss_pred HHhcCCCCeEEEEEe
Q 016389 260 LLQVNWNTYAVVVST 274 (390)
Q Consensus 260 lL~a~~~~~aLVVst 274 (390)
-=+-.++.++|+++.
T Consensus 295 ~~~~~~G~~vll~~~ 309 (320)
T cd00830 295 EGKLKKGDLVLLLGF 309 (320)
T ss_pred cCCCCCCCEEEEEEE
Confidence 111125788888875
No 140
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=93.78 E-value=0.23 Score=48.68 Aligned_cols=78 Identities=17% Similarity=0.114 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCC---CceeEecCCccchhHHHHHHHHHHHHh
Q 016389 187 QVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRG---NIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 187 ~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~---~v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
+-..++++++|+++|++++|||+++.+.+. .....-........++.++ ....-+++.+++++++..|..+...++
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~ 284 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLE 284 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHh
Confidence 344578999999999999999999977543 2222222333334444210 011135677888899999888887777
Q ss_pred cC
Q 016389 263 VN 264 (390)
Q Consensus 263 a~ 264 (390)
.+
T Consensus 285 ~~ 286 (332)
T cd00825 285 HG 286 (332)
T ss_pred cC
Confidence 65
No 141
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.78 E-value=0.25 Score=48.55 Aligned_cols=84 Identities=13% Similarity=0.111 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCcee---EecCCccchhHHHHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS---YNLGGMGCSAGVIAVDLAKDL 260 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~---~dl~gmGCsggl~aL~lA~~l 260 (390)
.+.+...++++++|+++|++++|||+++..- +.+.+-..+.+++|++.+-.. -+.+.++|+..+.+|..+
T Consensus 222 ~~~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~~~--- 294 (325)
T PRK12879 222 WAVRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALDLA--- 294 (325)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHHHH---
Confidence 4445566889999999999999999999763 345666789999999754221 134556677777777544
Q ss_pred HhcC---CCCeEEEEEe
Q 016389 261 LQVN---WNTYAVVVST 274 (390)
Q Consensus 261 L~a~---~~~~aLVVst 274 (390)
++.+ ++.++|+++.
T Consensus 295 ~~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 295 LEQGKIKPGDTLLLYGF 311 (325)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4432 4678887764
No 142
>PRK04262 hypothetical protein; Provisional
Probab=93.75 E-value=0.14 Score=51.38 Aligned_cols=81 Identities=14% Similarity=0.207 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCcee--E---ecCCccchhHHHHHHHHHHHH
Q 016389 187 QVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS--Y---NLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 187 ~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~--~---dl~gmGCsggl~aL~lA~~lL 261 (390)
....++++++|+++|++++|||++|+. ++.+.+-..++++||++++-.. + ..+++|+++-..+|.-+.+
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~H----q~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~-- 282 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFH----QPNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLD-- 282 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecC----CCchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHH--
Confidence 456778999999999999999999876 3344566778999999854221 1 4566777777777766544
Q ss_pred hcCCCCeEEEEE
Q 016389 262 QVNWNTYAVVVS 273 (390)
Q Consensus 262 ~a~~~~~aLVVs 273 (390)
+..++.++|+++
T Consensus 283 ~~~~Gd~vll~~ 294 (347)
T PRK04262 283 VAKPGDRILVVS 294 (347)
T ss_pred hCCCCCEEEEEe
Confidence 233456666654
No 143
>PRK06840 hypothetical protein; Validated
Probab=93.48 E-value=0.22 Score=49.48 Aligned_cols=81 Identities=19% Similarity=0.256 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeE---ecCCccchhHHHHHHHHHHHHh
Q 016389 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSY---NLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 186 ~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~---dl~gmGCsggl~aL~lA~~lL~ 262 (390)
.....++++++|+++|++++|||+++..- ..+..-..+.++||++++- .+ +.+++||+.-+++|..+ ++
T Consensus 236 ~~~~~~~i~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~Lgl~~~~-~~~~~~~Gn~~sas~~~~L~~~---~~ 307 (339)
T PRK06840 236 IPNFLKVIREALRKSGYTPKDIDYLAILH----MKRSAHIALLEGLGLTEEQ-AIYLDEYGHLGQLDQILSLHLA---LE 307 (339)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECC----cCHHHHHHHHHHcCCCHHH-eEeHHhccchhhhhHHHHHHHH---HH
Confidence 34567899999999999999999987532 2344556789999998532 12 34556666666666544 34
Q ss_pred cC---CCCeEEEEEe
Q 016389 263 VN---WNTYAVVVST 274 (390)
Q Consensus 263 a~---~~~~aLVVst 274 (390)
.+ ++.++|+++.
T Consensus 308 ~~~~~~Gd~ill~~~ 322 (339)
T PRK06840 308 QGKLKDGDLVVLVSA 322 (339)
T ss_pred cCCCCCCCEEEEEEE
Confidence 33 4677887764
No 144
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=93.31 E-value=0.25 Score=50.28 Aligned_cols=88 Identities=10% Similarity=0.109 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeE---ecCCccchhHHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSY---NLGGMGCSAGVIAVDLAKD 259 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~---dl~gmGCsggl~aL~lA~~ 259 (390)
+.+....-++++++|++.|++++|||++|..-. .+.+-..++++||++++-... +.+++|+++-+++|+-+.+
T Consensus 276 ~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~~~ 351 (379)
T PLN02326 276 KFAVRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEAVR 351 (379)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHHHH
Confidence 344555667899999999999999999987643 334455689999998653222 4456777777777765533
Q ss_pred HHhcCCCCeEEEEEe
Q 016389 260 LLQVNWNTYAVVVST 274 (390)
Q Consensus 260 lL~a~~~~~aLVVst 274 (390)
-=+..++.++|+++.
T Consensus 352 ~g~~~~Gd~vll~~~ 366 (379)
T PLN02326 352 SGKVKKGDVIATAGF 366 (379)
T ss_pred cCCCCCCCEEEEEEE
Confidence 111235677777763
No 145
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=93.30 E-value=0.21 Score=49.68 Aligned_cols=96 Identities=18% Similarity=0.287 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHH-HHcCCCCCceeEecCCccchhHHHHHHHHHHHHhc
Q 016389 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIV-NKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (390)
Q Consensus 185 a~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~-~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a 263 (390)
.-+|...+.+..+++++++|+.|+-+++.+......-...++++ -.-|++..+.-.-++- -||+|+.|+.....-+++
T Consensus 61 pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tvpv~tvNR-qCsSGLqaVadiA~~Ir~ 139 (435)
T KOG1389|consen 61 PDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETVPVRTVNR-QCSSGLQAVADIAAKIRA 139 (435)
T ss_pred hHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCcccchhhhhh-hhhhHHHHHHHHHHHHhc
Confidence 35678888999999999999999999988764321223444444 4458887766666664 699999999999999999
Q ss_pred CCCCeEEEEEeccCCcCc
Q 016389 264 NWNTYAVVVSTENITQNW 281 (390)
Q Consensus 264 ~~~~~aLVVstE~~S~~~ 281 (390)
+...--|-.+.|.+|.++
T Consensus 140 G~ydIGla~GvESMt~~~ 157 (435)
T KOG1389|consen 140 GFYDIGLAAGVESMTTNY 157 (435)
T ss_pred CceeeecccchhhhcccC
Confidence 988888888999999875
No 146
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=93.13 E-value=0.22 Score=51.37 Aligned_cols=91 Identities=14% Similarity=0.219 Sum_probs=62.4
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHHH
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~lL 261 (390)
..|++++|+++|++|+|||.+=++ ...+.......+.||+.++ .+|++| .|++|....+.++.+|-
T Consensus 303 ~~a~~~al~~AGl~~~DID~~ei~----daFa~~~l~~~e~lG~~~~--~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~ 376 (402)
T PRK08242 303 VPATRKALAKAGLTVDDIDLFELN----EAFASVVLRFMQALDIPHD--KVNVNGGAIAMGHPLGATGAMILGTVLDELE 376 (402)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEec----chhhHHHHHHHHHhCCCCc--CCCcCCCHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 469999999999999999998764 2244555667789998653 466665 46667777777777765
Q ss_pred hcCCCCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeec
Q 016389 262 QVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSN 307 (390)
Q Consensus 262 ~a~~~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~ 307 (390)
+. ..++.|+ +.|.=|-.+.|+|+++
T Consensus 377 ~~-~~~~g~~--------------------~~c~ggG~g~a~~~e~ 401 (402)
T PRK08242 377 RR-GKRTALI--------------------TLCVGGGMGIATIIER 401 (402)
T ss_pred hc-CCCeEEE--------------------EEcccCCceeEEEEEe
Confidence 43 2344443 2455566677777764
No 147
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=93.07 E-value=0.22 Score=51.01 Aligned_cols=76 Identities=17% Similarity=0.218 Sum_probs=57.5
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHH
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDL 260 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~l 260 (390)
...|++++++++|++|+|||.+=++= .......+-.+.||+..+ .+|.+| .||+|....+.++.+|
T Consensus 287 ~~~A~~~al~~Agl~~~DiDv~Ei~d----aFa~~~l~~le~lgl~g~--~vN~~GG~la~GHP~GatG~~~~~~l~~qL 360 (388)
T PRK06366 287 PIPATRKLLEKQNKSIDYYDLVEHNE----AFSIASIIVRDQLKIDNE--RFNVNGGAVAIGHPIGNSGSRIIVTLINAL 360 (388)
T ss_pred HHHHHHHHHHHcCCCHHHcceeeccc----hhHHHHHHHHHHhCCCCC--ccCCCCchhhhCCCcCCCHHHHHHHHHHHH
Confidence 36899999999999999999987652 233455666789999765 588877 6888888889998888
Q ss_pred HhcCCCCeEEE
Q 016389 261 LQVNWNTYAVV 271 (390)
Q Consensus 261 L~a~~~~~aLV 271 (390)
-+.+ .++.|+
T Consensus 361 ~~~~-~~~g~~ 370 (388)
T PRK06366 361 KTRH-MKTGLA 370 (388)
T ss_pred HhcC-CCeEEE
Confidence 7643 345443
No 148
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=92.86 E-value=0.28 Score=48.59 Aligned_cols=84 Identities=10% Similarity=0.104 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeE---ecCCccchhHHHHHHHHHHHHhc
Q 016389 187 QVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSY---NLGGMGCSAGVIAVDLAKDLLQV 263 (390)
Q Consensus 187 ~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~---dl~gmGCsggl~aL~lA~~lL~a 263 (390)
...-++++++|++.|++++|||++++.-. .+..-..+.++||++++-... +.++++|+.-+.+|+-+.+-=+.
T Consensus 226 ~~~~~~i~~~L~~~g~~~~did~~~~hq~----~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~~~~g~~ 301 (326)
T CHL00203 226 FQVPAVIIKCLNALNISIDEVDWFILHQA----NKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEAIQNNKI 301 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHHHHhCCC
Confidence 44667789999999999999999987643 234566789999998442222 23557777777777655331112
Q ss_pred CCCCeEEEEEe
Q 016389 264 NWNTYAVVVST 274 (390)
Q Consensus 264 ~~~~~aLVVst 274 (390)
.++.++|+++.
T Consensus 302 ~~Gd~vll~~~ 312 (326)
T CHL00203 302 QPGQIIVLSGF 312 (326)
T ss_pred CCCCEEEEEEE
Confidence 34678887764
No 149
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=92.76 E-value=0.4 Score=44.93 Aligned_cols=78 Identities=14% Similarity=0.055 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCcCEEEEee-cCCCCCCCHHHHHHHHcCCC---CCceeEecCCccchhHHHHHHHHHHHHh
Q 016389 187 QVMYGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRLR---GNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 187 ~la~~Aa~~aL~kagi~p~dId~LIv~~-s~~~~~Psla~~I~~~LgLr---~~v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
....++++++|+++|++++|||.++..- .+...............+.+ .....-..+.++|++++..|..+-.-++
T Consensus 145 ~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~ 224 (254)
T cd00327 145 EGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLE 224 (254)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHh
Confidence 3456789999999999999999988653 33332233333333333442 0111124456777777777776665555
Q ss_pred cC
Q 016389 263 VN 264 (390)
Q Consensus 263 a~ 264 (390)
..
T Consensus 225 ~~ 226 (254)
T cd00327 225 HE 226 (254)
T ss_pred CC
Confidence 54
No 150
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.67 E-value=0.37 Score=48.70 Aligned_cols=86 Identities=13% Similarity=0.152 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHH-cCCCCCc-ee----EecCCccchhHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNK-YRLRGNI-RS----YNLGGMGCSAGVIAVDL 256 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~-LgLr~~v-~~----~dl~gmGCsggl~aL~l 256 (390)
+++.+.+.++++++|+++|++++|||+++.+-.. +.+-..+.++ +|+..+. +. -..++++|++-..+|+.
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~----~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQAN----INMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 4667778899999999999999999999876321 1233335666 5653211 11 13466888888888887
Q ss_pred HHHHHhcCCCCeEEEEEe
Q 016389 257 AKDLLQVNWNTYAVVVST 274 (390)
Q Consensus 257 A~~lL~a~~~~~aLVVst 274 (390)
+.+-+ .++.++|+++.
T Consensus 343 ~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDL--AAGDLGVICSF 358 (372)
T ss_pred HhccC--CCCCEEEEEEe
Confidence 75433 35677777764
No 151
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=92.58 E-value=0.43 Score=48.93 Aligned_cols=93 Identities=12% Similarity=0.155 Sum_probs=57.4
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHH
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDL 260 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~l 260 (390)
...|++++|+++|++|+|||++-++-. .+....+..+.||+.. ..+|++| .|++|...-++++.++
T Consensus 293 ~~~a~~~al~~agl~~~dId~~e~~d~----f~~~~~~~~e~lg~~~--~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l 366 (393)
T PRK05656 293 PVSATRRCLDKAGWSLAELDLIEANEA----FAAQSLAVGKELGWDA--AKVNVNGGAIALGHPIGASGCRVLVTLLHEM 366 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCc----cHHHHHHHHHHhCCCC--ccCCcCCCHHHhCccHHHHHHHHHHHHHHHH
Confidence 357999999999999999999987522 3344556678888753 2355554 2444444555555444
Q ss_pred HhcCCCCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeecc
Q 016389 261 LQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNK 308 (390)
Q Consensus 261 L~a~~~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~ 308 (390)
=. ...++.| .+.|.=|-.++|+||+++
T Consensus 367 ~~-~~~~~gl--------------------~~~c~~gG~g~a~~~e~~ 393 (393)
T PRK05656 367 IR-RDAKKGL--------------------ATLCIGGGQGVALAIERD 393 (393)
T ss_pred HH-cCCCEEE--------------------EEEcccCcceEEEEEecC
Confidence 22 1223333 334555555778888763
No 152
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=92.57 E-value=0.24 Score=51.02 Aligned_cols=92 Identities=14% Similarity=0.201 Sum_probs=58.9
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHH
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDL 260 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~l 260 (390)
...|++++++++|++|+|||.+=. ....+....+-.+.||+.++ .+|.+| .||+|....+.+.++|
T Consensus 305 ~~~a~~~al~~Agi~~~did~~ei----~d~f~~~~l~~le~lg~~~~--pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL 378 (406)
T PRK07851 305 PVEASKQALARAGMSIDDIDLVEI----NEAFAAQVLPSARELGIDED--KLNVSGGAIALGHPFGMTGARITTTLLNNL 378 (406)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehh----hhHHHHHHHHHHHHhCCCcc--ccCCCCChHhhcCcHHHHHHHHHHHHHHHH
Confidence 357999999999999999999842 22234445555688888542 344444 3566666666776666
Q ss_pred HhcCCCCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeec
Q 016389 261 LQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSN 307 (390)
Q Consensus 261 L~a~~~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~ 307 (390)
-+ ++.++.|+ +.|.=|..++|+|+++
T Consensus 379 ~~-~~~~~g~~--------------------~~~~~gg~g~a~~~e~ 404 (406)
T PRK07851 379 QT-HDKTFGLE--------------------TMCVGGGQGMAMVLER 404 (406)
T ss_pred Hh-cCCCeEEE--------------------EEccccChhhEEEEEe
Confidence 44 33344333 2455566677777765
No 153
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=92.53 E-value=0.37 Score=49.42 Aligned_cols=67 Identities=19% Similarity=0.278 Sum_probs=52.6
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHH
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDL 260 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~l 260 (390)
...|++++|+++|++|+|||.+=++- ..+....+..+.||+.+. .+|.+| .||+|...-++++++|
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~~--~vN~~GG~la~Ghp~gatG~~~v~e~~~qL 367 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDPE--TVNIKGGAIAIGHPLGATGARIVGTLARQL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCcc--ccCCCCCHHHcCCCccchHHHHHHHHHHHH
Confidence 46799999999999999999987553 345566677899998753 577766 5788888888888888
Q ss_pred H
Q 016389 261 L 261 (390)
Q Consensus 261 L 261 (390)
-
T Consensus 368 ~ 368 (394)
T PRK06445 368 Q 368 (394)
T ss_pred H
Confidence 5
No 154
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=92.42 E-value=0.28 Score=50.49 Aligned_cols=77 Identities=14% Similarity=0.211 Sum_probs=52.1
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHHH
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~lL 261 (390)
..|++++|+++|++|+|||++-.+ ...........+.||+.++-..+|.+| .|++|...-++++++|-
T Consensus 299 ~~A~~~al~~AGl~~~DID~iei~----dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~ 374 (400)
T PRK13359 299 APATQKLLARLGMTLDQFDVIELN----EAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLE 374 (400)
T ss_pred HHHHHHHHHHhCCCHHHcCcCccC----cHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHh
Confidence 578999999999999999998743 223345556678899843334577766 24566666677777765
Q ss_pred hcCCCCeEEE
Q 016389 262 QVNWNTYAVV 271 (390)
Q Consensus 262 ~a~~~~~aLV 271 (390)
.. ..++.|+
T Consensus 375 ~~-~~~~g~~ 383 (400)
T PRK13359 375 RT-GGRFALC 383 (400)
T ss_pred hc-CCCeEEE
Confidence 42 3455444
No 155
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=92.42 E-value=0.29 Score=50.42 Aligned_cols=77 Identities=14% Similarity=0.200 Sum_probs=51.8
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCc--------cchhHHHHHHHHHHHH
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGM--------GCSAGVIAVDLAKDLL 261 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gm--------GCsggl~aL~lA~~lL 261 (390)
..|++++|+++|++|+|||++-++ ...+....+..+.||+-++-..+|.+|- |++|....++++++|-
T Consensus 300 ~~a~~~al~~Agl~~~DId~~ei~----D~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr 375 (401)
T PRK09050 300 APATRKLLARLGLTIDQFDVIELN----EAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLE 375 (401)
T ss_pred HHHHHHHHHHcCCCHHHCCccccC----cHhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHH
Confidence 578999999999999999998743 2234555566788998543345777662 5556666677777765
Q ss_pred hcCCCCeEEE
Q 016389 262 QVNWNTYAVV 271 (390)
Q Consensus 262 ~a~~~~~aLV 271 (390)
.. ..++.|+
T Consensus 376 ~~-~~~~g~~ 384 (401)
T PRK09050 376 RT-GGRYALC 384 (401)
T ss_pred hc-CCCeEEE
Confidence 43 3344443
No 156
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=92.40 E-value=0.2 Score=51.40 Aligned_cols=67 Identities=21% Similarity=0.356 Sum_probs=45.3
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHHH
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~lL 261 (390)
..|++++|+++|++|+|||.+=++ ...+....+-.+.||+.+ ..+|.+| .|++|....++++.+|-
T Consensus 298 ~~a~~~al~~agl~~~Did~~ei~----d~fa~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~ 371 (397)
T PRK06954 298 VGAIRKLFEKNGWRAAEVDLFEIN----EAFAVVTMAAMKEHGLPH--EKVNVNGGACALGHPIGASGARILVTLIGALR 371 (397)
T ss_pred HHHHHHHHHHcCCCHHHCCEEehh----hHHHHHHHHHHHHhCCCc--ccCCcCCChHHhcccHHHHHHHHHHHHHHHHH
Confidence 679999999999999999998433 112223334457888864 3466665 45666666677776664
Q ss_pred h
Q 016389 262 Q 262 (390)
Q Consensus 262 ~ 262 (390)
.
T Consensus 372 ~ 372 (397)
T PRK06954 372 A 372 (397)
T ss_pred h
Confidence 3
No 157
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=92.32 E-value=0.43 Score=48.89 Aligned_cols=92 Identities=12% Similarity=0.156 Sum_probs=61.7
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHH
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDL 260 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~l 260 (390)
...|++++|+++|++|+|||.+=++-+ .+...-+..+.||+..+ .+|.+| .||+|...-++++++|
T Consensus 287 ~~~a~~~al~~agl~~~did~~ei~d~----F~~~~l~~~e~lg~~~~--pvN~~GG~la~Ghp~gatG~~~v~e~~~qL 360 (387)
T PRK07850 287 PVQATAKVLEKAGMKIGDIDLVEINEA----FASVVLSWAQVHEPDMD--KVNVNGGAIALGHPVGSTGARLITTALHEL 360 (387)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeeeccc----chHHHHHHHHHcCCCCC--CcCCCCchhhcCCCcchhHHHHHHHHHHHH
Confidence 368999999999999999999977532 34445555688998653 677776 3455666667777777
Q ss_pred HhcCCCCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeec
Q 016389 261 LQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSN 307 (390)
Q Consensus 261 L~a~~~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~ 307 (390)
-+. ..++.|+. .|.=|..++|++|++
T Consensus 361 ~~~-~~~~g~~~--------------------~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 361 ERT-DKSTALIT--------------------MCAGGALSTGTIIER 386 (387)
T ss_pred Hhc-CCCeEEEE--------------------EccccCceeEEEEEe
Confidence 543 33454433 344555666777764
No 158
>PLN02287 3-ketoacyl-CoA thiolase
Probab=92.23 E-value=0.31 Score=51.09 Aligned_cols=96 Identities=16% Similarity=0.212 Sum_probs=64.3
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHH
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDL 260 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~l 260 (390)
...|++++|+++|++|+|||.+=++ ........+-.+.||+.+ ..+|.+| .||+|....+.++++|
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~----daFa~~~l~~~e~lG~~~--~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL 406 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEIN----EAFASQFVYCCKKLGLDP--EKVNVNGGAIALGHPLGATGARCVATLLHEM 406 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec----chHHHHHHHHHHHcCCCc--cccCCCCcHHhccCcHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999544 222333444567888854 3466555 5777777777887777
Q ss_pred HhcCCC-CeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeecccc
Q 016389 261 LQVNWN-TYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRK 310 (390)
Q Consensus 261 L~a~~~-~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~~ 310 (390)
-+.+.. ++.|+ +.|.=|--|.|+||++.++
T Consensus 407 ~~~~~~~~~gl~--------------------~~c~ggG~g~a~~ie~~~~ 437 (452)
T PLN02287 407 KRRGKDCRFGVV--------------------SMCIGTGMGAAAVFERGDS 437 (452)
T ss_pred HhcCCCCCeeEE--------------------EEccccCceeEEEEEecCc
Confidence 654321 33333 3455566677888888664
No 159
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=92.06 E-value=0.33 Score=41.95 Aligned_cols=74 Identities=20% Similarity=0.346 Sum_probs=52.9
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHHH
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~lL 261 (390)
..|++++|+++|++++|||.+=++=+ .-+.....++.+|+.+ ..+|.+| .||+|...-+++++++-
T Consensus 25 ~~A~~~al~~ag~~~~did~~Ei~Ea----FA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~ 98 (123)
T PF02803_consen 25 VPAARKALERAGLTPDDIDVIEINEA----FAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQLR 98 (123)
T ss_dssp HHHHHHHHHHHT--GGGESEEEE--S----BHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCccccchhhccch----hhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHHH
Confidence 57899999999999999999877632 2244556778999875 4688877 58899999999999887
Q ss_pred hcCCCCeEE
Q 016389 262 QVNWNTYAV 270 (390)
Q Consensus 262 ~a~~~~~aL 270 (390)
+.+ .++.+
T Consensus 99 ~~~-~~~gl 106 (123)
T PF02803_consen 99 RRG-GRYGL 106 (123)
T ss_dssp HHT-TSEEE
T ss_pred Hhc-hhhhh
Confidence 653 34443
No 160
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=92.03 E-value=0.25 Score=50.70 Aligned_cols=70 Identities=19% Similarity=0.357 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHH
Q 016389 188 VMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKD 259 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~ 259 (390)
-...|++++|+++|++|+|||.+-++- ..+...-+-.+.||+.+ ..+|.+| .|++|....++++.+
T Consensus 290 ~~~~a~~~al~~agl~~~did~~ei~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~el~~q 363 (391)
T PRK07661 290 GPIAAIPKALKLAGLELSDIGLFELNE----AFASQSIQVIRELGLDE--EKVNVNGGAIALGHPLGCTGAKLTLSLIHE 363 (391)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCC----HHHHHHHHHHHHcCCCC--CCCCCCCChHHhCCcHHHHHHHHHHHHHHH
Confidence 346899999999999999999998542 23344445567888753 2355554 467777777777777
Q ss_pred HHhc
Q 016389 260 LLQV 263 (390)
Q Consensus 260 lL~a 263 (390)
|-+.
T Consensus 364 L~~~ 367 (391)
T PRK07661 364 MKRR 367 (391)
T ss_pred HHhc
Confidence 7653
No 161
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=91.66 E-value=1.7 Score=44.08 Aligned_cols=120 Identities=14% Similarity=0.219 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCC---CcC-----EEEEee----------------------cCCCCCCC-----HHHH
Q 016389 182 REEAEQVMYGALDNLFSNTNVNPK---DIG-----ILVVNC----------------------SLFNPTPS-----LSAM 226 (390)
Q Consensus 182 ~eea~~la~~Aa~~aL~kagi~p~---dId-----~LIv~~----------------------s~~~~~Ps-----la~~ 226 (390)
......++..|+++||+++|+-+. +.| .+|=.+ |+| ..|- -+.+
T Consensus 91 ms~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPf-fVPkil~NM~ag~ 169 (440)
T KOG1394|consen 91 MSKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPF-FVPKILTNMAAGY 169 (440)
T ss_pred hhHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCcc-ccchhhcccccch
Confidence 456788999999999999998765 222 222111 011 1221 4568
Q ss_pred HHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcCc----------------cc------C
Q 016389 227 IVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNW----------------YF------G 284 (390)
Q Consensus 227 I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~~----------------~~------~ 284 (390)
|.-+||++.. ...++ -+|+.|..+|--|.++++-+.....|-=++|.+-..+ ++ .
T Consensus 170 vsm~~gl~Gp--nhsvS-TACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPf 246 (440)
T KOG1394|consen 170 VSMKYGLRGP--NHSVS-TACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPF 246 (440)
T ss_pred hhhhhcCcCC--chhhH-hhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCC
Confidence 8889999864 35566 4899999999999999998865555544566542110 11 1
Q ss_pred C-CcccccccccccCCceEEEeeccc
Q 016389 285 N-KKSMLIPNCLFRVGCSAVLLSNKR 309 (390)
Q Consensus 285 ~-drs~lv~~~LFgDGAAAvLLs~~~ 309 (390)
| +|+ .+..|.|++.++|+.=+
T Consensus 247 D~~Rd----GFVmGEGagvlvlEelE 268 (440)
T KOG1394|consen 247 DKKRD----GFVMGEGAGVLVLEELE 268 (440)
T ss_pred ccCCC----ceeeccceeEEehHhHH
Confidence 1 233 57899999999998644
No 162
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=91.38 E-value=0.4 Score=49.31 Aligned_cols=93 Identities=15% Similarity=0.275 Sum_probs=58.5
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCC-ceeEecCC--------ccchhHHHHHHHHHHH
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGN-IRSYNLGG--------MGCSAGVIAVDLAKDL 260 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~-v~~~dl~g--------mGCsggl~aL~lA~~l 260 (390)
..|++++|+++|++|+|||.+=++- ..+....+..+.||+.++ ...+|.+| .||+|...-++++++|
T Consensus 301 ~~a~~~al~~Agl~~~Did~~ei~d----~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL 376 (404)
T PRK06205 301 VPATEKALARAGLTLDDIDLIELNE----AFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLREL 376 (404)
T ss_pred HHHHHHHHHHcCCCHHHCCEeeecc----HHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHH
Confidence 5789999999999999999987542 233445556688887541 01366665 3455555556666665
Q ss_pred HhcCCCCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeec
Q 016389 261 LQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSN 307 (390)
Q Consensus 261 L~a~~~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~ 307 (390)
-+. ..++.| ++.|.=|..|.|+|+++
T Consensus 377 ~~~-~~~~gl--------------------~~~c~~gg~g~a~~~e~ 402 (404)
T PRK06205 377 QRR-QARYGL--------------------ETMCIGGGQGLAAVFER 402 (404)
T ss_pred Hhc-CCCeEE--------------------EEEeccCChhhEEEEEe
Confidence 432 223333 33566666677777764
No 163
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=91.29 E-value=0.49 Score=48.75 Aligned_cols=77 Identities=14% Similarity=0.267 Sum_probs=52.0
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHHH
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~lL 261 (390)
..|++++|+++|++|+|||++=.+ ...+....+..+.||+.++-..+|.+| .|++|....++++++|-
T Consensus 299 ~~a~~~al~~Agl~~~DID~~ei~----D~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr 374 (400)
T TIGR02430 299 VPATQKLLARAGLSIDQFDVIELN----EAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLE 374 (400)
T ss_pred HHHHHHHHHHhCCCHHHCCCcccC----cHHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHH
Confidence 578999999999999999998733 234455666778899854334566665 24566666677777775
Q ss_pred hcCCCCeEEE
Q 016389 262 QVNWNTYAVV 271 (390)
Q Consensus 262 ~a~~~~~aLV 271 (390)
. .+.++.|+
T Consensus 375 ~-~~~~~g~~ 383 (400)
T TIGR02430 375 R-SGGRYALC 383 (400)
T ss_pred h-cCCCEEEE
Confidence 4 23344443
No 164
>PRK09051 beta-ketothiolase; Provisional
Probab=91.14 E-value=0.48 Score=48.68 Aligned_cols=67 Identities=15% Similarity=0.257 Sum_probs=47.8
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHHH
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~lL 261 (390)
..|++++|+++|++|+|||++=++- ..+....+..+.||+.+ ..+|.+| .|++|....+.++++|-
T Consensus 295 ~~a~~~al~~agi~~~did~~ei~d----~f~~~~~~~~e~lg~~~--~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~ 368 (394)
T PRK09051 295 VPATQKALERAGLTVADLDVIEANE----AFAAQACAVTRELGLDP--AKVNPNGSGISLGHPVGATGAIITVKALYELQ 368 (394)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEecC----ccHHHHHHHHHHhCCCc--cccCCCccHHHhcchHHHHHHHHHHHHHHHHH
Confidence 6789999999999999999997652 24455666778999864 3566665 34555666666666665
Q ss_pred h
Q 016389 262 Q 262 (390)
Q Consensus 262 ~ 262 (390)
+
T Consensus 369 ~ 369 (394)
T PRK09051 369 R 369 (394)
T ss_pred h
Confidence 4
No 165
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=91.00 E-value=0.42 Score=42.71 Aligned_cols=30 Identities=17% Similarity=0.125 Sum_probs=25.6
Q ss_pred ccCCCceEEEEccchHHHHHHHHHHhHHHh
Q 016389 341 QDDQGKTGVSLSKELMAIAGGALKTNITTL 370 (390)
Q Consensus 341 ed~~g~~g~~Lsk~vp~va~~aL~~ni~~l 370 (390)
..++.||.+.|+|+||.+++++++..++.+
T Consensus 20 ~i~~~Gf~~~Ls~~vP~~i~~~i~~~~~~~ 49 (151)
T PF02797_consen 20 DIGDTGFHFILSKEVPDLISDNIPPFVEDL 49 (151)
T ss_dssp EEETTEEEEEE-TTHHHHHHHHHHHHHHHH
T ss_pred EEeCCeEEEEEhhHhHHHHHHHHHHHHHHH
Confidence 346788999999999999999999998775
No 166
>PRK05790 putative acyltransferase; Provisional
Probab=90.86 E-value=0.53 Score=48.07 Aligned_cols=75 Identities=15% Similarity=0.221 Sum_probs=50.6
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHHH
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~lL 261 (390)
..|++++++++|++|+|||.+=.+- ..+....+..+.||+.+ ..+|.+| .|++|....++++++|-
T Consensus 294 ~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~l~~~e~lg~~~--~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~ 367 (393)
T PRK05790 294 VPAIRKALEKAGWSLADLDLIEINE----AFAAQALAVEKELGLDP--EKVNVNGGAIALGHPIGASGARILVTLLHEMK 367 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCCh--hhcCCCcchhhhCcchhhhHHHHHHHHHHHHH
Confidence 4789999999999999999986432 23344556678898753 2355554 46677777777777765
Q ss_pred hcCCCCeEEE
Q 016389 262 QVNWNTYAVV 271 (390)
Q Consensus 262 ~a~~~~~aLV 271 (390)
.. ..+++|+
T Consensus 368 ~~-~~~~gl~ 376 (393)
T PRK05790 368 RR-GAKKGLA 376 (393)
T ss_pred hc-CCCeEEE
Confidence 43 2344443
No 167
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=90.75 E-value=0.55 Score=47.84 Aligned_cols=67 Identities=15% Similarity=0.223 Sum_probs=47.7
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHHH
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~lL 261 (390)
..|+++|++++|++|+|||.+=.+ ........+..+.||+.++ .+|.+| .|++|...-++++++|-
T Consensus 283 ~~a~~~a~~~agi~~~did~~e~~----d~Fa~~~~~~~e~lG~~~~--pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~ 356 (382)
T PRK07801 283 IPATRYALEKTGLSIDDIDVVEIN----EAFAPVVLAWLKETGADPA--KVNPNGGAIALGHPLGATGAKLMTTLLHELE 356 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEeeec----ccchHHHHHHHHHhCCCch--hcCCCcchhhhcCcHHHHHHHHHHHHHHHHH
Confidence 468999999999999999998443 2234555666788998753 577766 35555566666666665
Q ss_pred h
Q 016389 262 Q 262 (390)
Q Consensus 262 ~ 262 (390)
.
T Consensus 357 ~ 357 (382)
T PRK07801 357 R 357 (382)
T ss_pred h
Confidence 4
No 168
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=90.72 E-value=0.49 Score=48.55 Aligned_cols=68 Identities=19% Similarity=0.259 Sum_probs=49.6
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHH
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDL 260 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~l 260 (390)
...|++++|+++|++|+|||++=+ ....+...-+..+.||+.+. .+|.+| .||+|....++++++|
T Consensus 293 ~~~a~~~al~~agl~~~did~~e~----~d~f~~~~l~~~e~lg~~~~--pvN~~GG~la~Ghp~gasG~~~~~~l~~qL 366 (393)
T PRK08235 293 PGYAINALLEKTGKTVEDIDLFEI----NEAFAAVALASTEIAGIDPE--KVNVNGGAVALGHPIGASGARIIVTLIHEL 366 (393)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehh----cchhHHHHHHHHHHhCCCcc--cCCcCCchHHhCCcHHHHHHHHHHHHHHHH
Confidence 357999999999999999999853 22344556667789998642 455555 4677777777887777
Q ss_pred Hh
Q 016389 261 LQ 262 (390)
Q Consensus 261 L~ 262 (390)
-.
T Consensus 367 ~~ 368 (393)
T PRK08235 367 KR 368 (393)
T ss_pred Hh
Confidence 54
No 169
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=90.58 E-value=1.2 Score=45.67 Aligned_cols=69 Identities=20% Similarity=0.315 Sum_probs=45.5
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCC-ceeEecCC--------ccchhHHHHHHHHHH
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGN-IRSYNLGG--------MGCSAGVIAVDLAKD 259 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~-v~~~dl~g--------mGCsggl~aL~lA~~ 259 (390)
...|++++++++|++|+|||.+=++- ..........+.||+-+. =..+|.+| .|++|.-..+.++ +
T Consensus 282 ~~~a~~~al~~AGi~p~DId~~Ei~d----aFa~~~l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~-~ 356 (385)
T TIGR02445 282 PVPATQKALKRAGLSISDIDVFELNE----AFAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLL-N 356 (385)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEcc----ccHHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHH-H
Confidence 35788999999999999999876542 234555666788997321 02466655 4566655555555 4
Q ss_pred HHh
Q 016389 260 LLQ 262 (390)
Q Consensus 260 lL~ 262 (390)
+++
T Consensus 357 ~l~ 359 (385)
T TIGR02445 357 LME 359 (385)
T ss_pred HHH
Confidence 444
No 170
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=89.82 E-value=0.69 Score=47.61 Aligned_cols=69 Identities=13% Similarity=0.221 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHH
Q 016389 188 VMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKD 259 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~ 259 (390)
-...|++++|+++|++|+|||++=.+ ...+.......+.||+... .+|.+| .|++|....+.++.+
T Consensus 298 ~~~~A~~~al~~Agi~~~did~~ei~----D~f~~~~l~~~e~lg~~~~--~vN~~GG~la~GHp~gasG~~~~~~~~~~ 371 (399)
T PRK09052 298 GPIEAIPAALKQAGLKQDDLDWIELN----EAFAAQSLAVIRDLGLDPS--KVNPLGGAIALGHPLGATGAIRTATVVHG 371 (399)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEeC----cHHHHHHHHHHHHhCCCCc--ccCCCCchhhcCchHHHHHHHHHHHHHHH
Confidence 34689999999999999999998643 2233445556688887532 344444 256666666666666
Q ss_pred HHh
Q 016389 260 LLQ 262 (390)
Q Consensus 260 lL~ 262 (390)
|-.
T Consensus 372 L~~ 374 (399)
T PRK09052 372 LRR 374 (399)
T ss_pred HHh
Confidence 644
No 171
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=89.80 E-value=0.29 Score=48.18 Aligned_cols=95 Identities=12% Similarity=0.156 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecC-CCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHh
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSL-FNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~-~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
-+.+++.+|...+|+++.++.+.||++|+.+.. ..-+..++..-+-.-|.+..+.+-.+. |+|-+.-.|+-..-.++.
T Consensus 65 mphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvt-macissn~amttgmglia 143 (465)
T KOG1392|consen 65 MPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVT-MACISSNVAMTTGMGLIA 143 (465)
T ss_pred chhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceee-eehhccchhhhccceeEe
Confidence 357899999999999999999999999998854 444555665555566787777777776 999999999999999998
Q ss_pred cCCCCeEEEEEeccCCc
Q 016389 263 VNWNTYAVVVSTENITQ 279 (390)
Q Consensus 263 a~~~~~aLVVstE~~S~ 279 (390)
.+....++-=+.|.+|-
T Consensus 144 tg~~dvivaggvelmsd 160 (465)
T KOG1392|consen 144 TGNADVIVAGGVELMSD 160 (465)
T ss_pred eCCcCEEEEcceeeccc
Confidence 87544444445688874
No 172
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=89.48 E-value=0.65 Score=47.31 Aligned_cols=42 Identities=12% Similarity=0.181 Sum_probs=31.2
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCC
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRG 235 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~ 235 (390)
..|++++++++|++|+|||++-..- ..+....+..+.||+.+
T Consensus 288 ~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~~~~~e~lg~~~ 329 (386)
T cd00751 288 VPAIPKALKRAGLTLDDIDLIEINE----AFAAQALACLKELGLDP 329 (386)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEeec----hhHHHHHHHHHHhCCCh
Confidence 5899999999999999999987541 12234455568888753
No 173
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=89.07 E-value=1 Score=45.88 Aligned_cols=70 Identities=16% Similarity=0.184 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecC--------CccchhHHHHHHHHHH
Q 016389 188 VMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLG--------GMGCSAGVIAVDLAKD 259 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~--------gmGCsggl~aL~lA~~ 259 (390)
-...|++++|+++|++|+|||++..+ ...+.......++||+.+. .+|.+ -.|++|......+..+
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~----eafa~~~~~~~e~lgl~~~--~vn~~GG~la~Ghp~GatG~~~~~~~~~q 332 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEIN----EAFASKVVACAKELQIPYE--KLNVNGGAIALGHPYGASGAMLVTRLFYQ 332 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeec----chhHHHHHHHHHhcCCCch--hcccCCcHHhccCchhhhHHHHHHHHHHH
Confidence 45679999999999999999999764 2344556667789998643 45554 2578888888888888
Q ss_pred HHhc
Q 016389 260 LLQV 263 (390)
Q Consensus 260 lL~a 263 (390)
+-+.
T Consensus 333 l~~~ 336 (361)
T PRK06690 333 AKRE 336 (361)
T ss_pred HHHh
Confidence 7653
No 174
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=88.87 E-value=1.4 Score=45.25 Aligned_cols=69 Identities=19% Similarity=0.231 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHH
Q 016389 188 VMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKD 259 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~ 259 (390)
....|++++++++|++|+|||++=++-+ .+...-+..+.||+.+. .+|.+| .||+|.-....++.+
T Consensus 289 ~~~~a~~~a~~~agl~~~Did~~Ei~d~----Fa~~~l~~~e~lG~~~~--pvN~~GG~la~Ghp~gatG~r~~~~l~~~ 362 (390)
T PRK06504 289 APLPATERALKKAGMKIDDIDLYEVNEA----FASVPLAWLKATGADPE--RLNVNGGAIALGHPLGASGTKLMTTLVHA 362 (390)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEeccc----chHHHHHHHHHhCCCCC--CcCCCCcHHhcCCCcchhHHHHHHHHHHH
Confidence 3446899999999999999999865532 33455567799999754 477776 344555555566666
Q ss_pred HHh
Q 016389 260 LLQ 262 (390)
Q Consensus 260 lL~ 262 (390)
+-+
T Consensus 363 lr~ 365 (390)
T PRK06504 363 LKQ 365 (390)
T ss_pred HHh
Confidence 654
No 175
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=88.74 E-value=0.82 Score=46.06 Aligned_cols=87 Identities=9% Similarity=0.095 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEeec-CCCCCCCHHHHHHHHcCCCC-C--c--eeEecCCccchhHHHHHHHHHHHH
Q 016389 188 VMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRG-N--I--RSYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dId~LIv~~s-~~~~~Psla~~I~~~LgLr~-~--v--~~~dl~gmGCsggl~aL~lA~~lL 261 (390)
-..++++++|+++|++|+|||.++..-+ +..--.-....+.+-+|-.. . + ..-.++..|.++|...+-.+-..+
T Consensus 235 gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~ 314 (348)
T PRK06147 235 GLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAAS 314 (348)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHH
Confidence 3558899999999999999999985533 22211111222333344211 1 1 112244455566666666665666
Q ss_pred hcC--CCCeEEEEEe
Q 016389 262 QVN--WNTYAVVVST 274 (390)
Q Consensus 262 ~a~--~~~~aLVVst 274 (390)
+.+ |..++||.+.
T Consensus 315 ~~g~~~g~~~L~~s~ 329 (348)
T PRK06147 315 RKGYGPGPNVLCHLS 329 (348)
T ss_pred HcCcCCCCcEEEEec
Confidence 665 4678999875
No 176
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=88.73 E-value=1.3 Score=45.45 Aligned_cols=69 Identities=20% Similarity=0.272 Sum_probs=48.0
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCC-ceeEecCC--------ccchhHHHHHHHHHHH
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGN-IRSYNLGG--------MGCSAGVIAVDLAKDL 260 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~-v~~~dl~g--------mGCsggl~aL~lA~~l 260 (390)
..|++++++++|++|+|||.+=++- ..+....+..+.||+-+. -..+|.+| .||+|.-..+.+++++
T Consensus 285 ~~a~~~al~~Agl~~~DId~~El~d----~F~~~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L 360 (387)
T PRK08947 285 VPATQKALKRAGLSISDIDVFELNE----AFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLM 360 (387)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecc----cchHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHH
Confidence 5788999999999999999986542 244556666788998432 12466665 4677766666666666
Q ss_pred Hh
Q 016389 261 LQ 262 (390)
Q Consensus 261 L~ 262 (390)
-+
T Consensus 361 ~~ 362 (387)
T PRK08947 361 ER 362 (387)
T ss_pred Hh
Confidence 44
No 177
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=88.31 E-value=1.4 Score=44.29 Aligned_cols=46 Identities=9% Similarity=0.102 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCC
Q 016389 187 QVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGN 236 (390)
Q Consensus 187 ~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~ 236 (390)
.-...|++++|+++|++++|||++=++.+ .|....+..+.||+.++
T Consensus 251 ~~~~~a~~~al~~Agl~~~did~~ei~d~----F~~~~l~~~e~lGl~~~ 296 (375)
T cd00829 251 DAARLAARRAYKMAGITPDDIDVAELYDC----FTIAELLALEDLGFCEK 296 (375)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecCc----ChHHHHHHHHHcCCCCC
Confidence 34458999999999999999999876533 34556677788988753
No 178
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=87.72 E-value=1.6 Score=43.83 Aligned_cols=88 Identities=10% Similarity=0.049 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHcC--CCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCce------eEecCCccchhHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNT--NVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIR------SYNLGGMGCSAGVIAV 254 (390)
Q Consensus 183 eea~~la~~Aa~~aL~ka--gi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~------~~dl~gmGCsggl~aL 254 (390)
+.+.....++++++|++. |++++|||+++..... +.+-..+.++||++++-. --+.+++|+++-..+|
T Consensus 255 ~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~----~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L 330 (361)
T cd00831 255 RLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGG----RAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVL 330 (361)
T ss_pred HHHHHHHHHHHHHHhccccCCCccccceEEEECCCC----hHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHH
Confidence 455566778899999999 9999999999976532 234456889999985421 1255678888888888
Q ss_pred HHHHHHHhcCCCCeEEEEEe
Q 016389 255 DLAKDLLQVNWNTYAVVVST 274 (390)
Q Consensus 255 ~lA~~lL~a~~~~~aLVVst 274 (390)
+-+.+-=+-.++.++++++.
T Consensus 331 ~~~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 331 AYMEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHHhCCCCCCCEEEEEEE
Confidence 87654212224677777763
No 179
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=87.34 E-value=1.4 Score=44.31 Aligned_cols=87 Identities=17% Similarity=0.212 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCc--eeEecCCccchhHHHHHHHHHH
Q 016389 182 REEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNI--RSYNLGGMGCSAGVIAVDLAKD 259 (390)
Q Consensus 182 ~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v--~~~dl~gmGCsggl~aL~lA~~ 259 (390)
-+.+..++.++++++|++.|++++|||.+|.+ +....+-..+++++|++.+- ..++-.| ..++.-+-|.+...
T Consensus 218 fk~av~~~~~~~~~~L~~~~l~~~dId~~vpH----Qan~ri~~~i~~~l~~~~~k~~~~~~~yG-NtsaAsiplaL~~~ 292 (323)
T COG0332 218 FKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPH----QANLRIIEAIAKKLGIPEEKVVVTVDKYG-NTSAASIPLALDEA 292 (323)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEccc----cccHHHHHHHHHHcCCCHHHHhhHHHHhc-ccccchHHHHHHHH
Confidence 47788999999999999999999999999854 44456677899999997542 3334444 45555555555433
Q ss_pred HHhc--CCCCeEEEEE
Q 016389 260 LLQV--NWNTYAVVVS 273 (390)
Q Consensus 260 lL~a--~~~~~aLVVs 273 (390)
+=+. .++.++|+++
T Consensus 293 ~~~g~ik~Gd~ill~~ 308 (323)
T COG0332 293 LREGRIKPGDLVLLEA 308 (323)
T ss_pred hhhCCCCCCCEEEEEe
Confidence 3222 2345565543
No 180
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=87.23 E-value=2.2 Score=43.64 Aligned_cols=85 Identities=12% Similarity=0.149 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCC-----CCceeE-ecCCccchhHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR-----GNIRSY-NLGGMGCSAGVIAVDL 256 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr-----~~v~~~-dl~gmGCsggl~aL~l 256 (390)
+.=..-...|+++.+++.|.+|+|.|.+|+. .|.|.+....+..++.+ +.+... .++.+.|.+.+.+|
T Consensus 205 ~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH----~P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~L-- 278 (377)
T COG3425 205 PAYFKHVENAAKGYMEKTGLSPDDFDYIVFH----QPNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGL-- 278 (377)
T ss_pred HHHHHHHHHHHHHHHHHhCCChhhhCeEEec----CCCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHH--
Confidence 3334566789999999999999999999875 46777888888888766 555444 58889999988665
Q ss_pred HHHHHhcC-CCCeEEEEE
Q 016389 257 AKDLLQVN-WNTYAVVVS 273 (390)
Q Consensus 257 A~~lL~a~-~~~~aLVVs 273 (390)
|.-|=++. ++.++|+++
T Consensus 279 as~L~~a~~~G~rIl~~S 296 (377)
T COG3425 279 ASLLDNAKLPGDRILLFS 296 (377)
T ss_pred HHHHhhcCCCCCEEEEEe
Confidence 45555555 778999886
No 181
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=86.46 E-value=2.5 Score=43.10 Aligned_cols=71 Identities=17% Similarity=0.180 Sum_probs=47.7
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCC----------------ceeEecCC--------
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGN----------------IRSYNLGG-------- 244 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~----------------v~~~dl~g-------- 244 (390)
...|++++++++|++|+|||.+-.+-+ .+....+..+.||+-+. -..+|.+|
T Consensus 260 ~~~a~~~al~~aGi~~~did~~e~~d~----ft~~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~pvN~~GG~l~~Ghp 335 (389)
T PRK06064 260 AVVAAEKAYKMAGIEPKDIDVAEVHDC----FTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPVNPSGGLKAKGHP 335 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCC----CcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCC
Confidence 447899999999999999999865532 22355667788887321 12366654
Q ss_pred ccchhHHHHHHHHHHHHhc
Q 016389 245 MGCSAGVIAVDLAKDLLQV 263 (390)
Q Consensus 245 mGCsggl~aL~lA~~lL~a 263 (390)
.||+|....++++++|-..
T Consensus 336 ~~a~G~~~~~e~~~qL~g~ 354 (389)
T PRK06064 336 VGATGVSQAVEIVWQLRGE 354 (389)
T ss_pred cchhHHHHHHHHHHHHhCC
Confidence 3566666667777776643
No 182
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=86.42 E-value=1.7 Score=44.67 Aligned_cols=71 Identities=14% Similarity=0.149 Sum_probs=51.9
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCC----------------ceeEecCC--------
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGN----------------IRSYNLGG-------- 244 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~----------------v~~~dl~g-------- 244 (390)
...|++++|+++|++|+|||++=++-+ .+....+..+.||+.+. -..+|.+|
T Consensus 271 ~~~A~~~al~~Agi~~~DID~~Ei~d~----Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP 346 (393)
T cd00826 271 PIEAARKALEKAGLGIGDLDLIEAHDA----FAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHP 346 (393)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehhhh----hHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCC
Confidence 368999999999999999998865532 33455566688887641 13577666
Q ss_pred ccchhHHHHHHHHHHHHhc
Q 016389 245 MGCSAGVIAVDLAKDLLQV 263 (390)
Q Consensus 245 mGCsggl~aL~lA~~lL~a 263 (390)
.||+|....++++++|-..
T Consensus 347 ~gAtG~~~~~e~~~qL~g~ 365 (393)
T cd00826 347 IGASGAAICAELCFELKGE 365 (393)
T ss_pred ccccHHHHHHHHHHHHhhh
Confidence 5778888888888888653
No 183
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=86.36 E-value=17 Score=34.57 Aligned_cols=115 Identities=14% Similarity=0.035 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCC----------------CCCC-HHHHHHH--------HcCCCCCc
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFN----------------PTPS-LSAMIVN--------KYRLRGNI 237 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~----------------~~Ps-la~~I~~--------~LgLr~~v 237 (390)
.....|++.++.+++++. .++|.+|++|..+. ..|. ++.-|+| ..|-+..
T Consensus 32 s~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~~~- 106 (218)
T PF13723_consen 32 SRLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNTGP- 106 (218)
T ss_pred CHHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCCCc-
Confidence 356788888988888652 56778888875321 2332 2222222 3343322
Q ss_pred eeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeeccc
Q 016389 238 RSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKR 309 (390)
Q Consensus 238 ~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~~~ 309 (390)
..-+.+ |=.++-.||--|..+++.+ ...||||+.|-.....|.....+ .....-.|.|++|++..
T Consensus 107 -~tal~a-~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~----~~~~~~~A~al~L~~~~ 171 (218)
T PF13723_consen 107 -NTALAA-GEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPE----RDPPFPYALALVLSPGD 171 (218)
T ss_pred -eEEEec-CcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhcccc----cCCCcCEEEEEEecCCC
Confidence 333442 5567888999999999998 89999999998877666442111 11122335677777654
No 184
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=86.18 E-value=0.83 Score=46.89 Aligned_cols=68 Identities=13% Similarity=0.118 Sum_probs=44.8
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHH
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDL 260 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~l 260 (390)
...|++++|+++|++|+|||.+=++ ........+..+.||+.+ ..+|.+| .|++|.-..+.+++.|
T Consensus 292 ~~~a~~~al~~agl~~~Did~~ei~----eafa~~~l~~~e~lg~~~--~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l 365 (392)
T PRK07108 292 PVFAVPKLLKQAGLKVDDIDLWELN----EAFAVQVLYCRDTLGIPM--DRLNVNGGAIAVGHPYGVSGARLTGHALIEG 365 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCchHhh----hHHHHHHHHHHHhcCCCc--cccCCCCChHHhCcchhhhHHHHHHHHHHHH
Confidence 3689999999999999999998533 111222333457788754 2456665 4566666666776666
Q ss_pred Hh
Q 016389 261 LQ 262 (390)
Q Consensus 261 L~ 262 (390)
-+
T Consensus 366 ~~ 367 (392)
T PRK07108 366 KR 367 (392)
T ss_pred Hh
Confidence 44
No 185
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=85.65 E-value=1.9 Score=43.99 Aligned_cols=71 Identities=14% Similarity=0.075 Sum_probs=50.5
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCC----------------ceeEecCC--------
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGN----------------IRSYNLGG-------- 244 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~----------------v~~~dl~g-------- 244 (390)
...|++++++++|++|+|||++=++-+ .+....+..+.||+-+. -..+|.+|
T Consensus 262 ~~~a~~~a~~~agl~~~did~~e~~d~----f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG~la~Ghp 337 (389)
T PRK07516 262 PRRAWQRALAQAGVTLDDLSFVETHDC----FTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGGLKAKGHP 337 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEecC----CCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCC
Confidence 347999999999999999999876532 34455666788887642 11366544
Q ss_pred ccchhHHHHHHHHHHHHhc
Q 016389 245 MGCSAGVIAVDLAKDLLQV 263 (390)
Q Consensus 245 mGCsggl~aL~lA~~lL~a 263 (390)
.||+|.......+++|...
T Consensus 338 ~gasG~~~~~e~~~QL~g~ 356 (389)
T PRK07516 338 IGATGVSMHVLAAMQLTGE 356 (389)
T ss_pred ccHHHHHHHHHHHHHhcCC
Confidence 4677788888888887653
No 186
>PRK06059 lipid-transfer protein; Provisional
Probab=85.45 E-value=4.4 Score=41.51 Aligned_cols=69 Identities=17% Similarity=0.148 Sum_probs=45.9
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCC---c-------------eeEecCC--------c
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGN---I-------------RSYNLGG--------M 245 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~---v-------------~~~dl~g--------m 245 (390)
..|++++++++|++|+|||.+=++-+ | .....+..+.||+.+. - ..+|.+| .
T Consensus 276 ~~a~~~a~~~agl~~~Did~~El~d~-f---~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~ 351 (399)
T PRK06059 276 DQILDAAYAEAGIGPEDLSLAEVYDL-S---TALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAI 351 (399)
T ss_pred HHHHHHHHHHcCCCHHHCcEEeeccc-C---hHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccC
Confidence 47899999999999999999976643 1 2233344588887642 0 2467766 3
Q ss_pred cchhHHHHHHHHHHHHh
Q 016389 246 GCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 246 GCsggl~aL~lA~~lL~ 262 (390)
||+|...-.+++++|-.
T Consensus 352 gatG~~~~~e~~~qLrg 368 (399)
T PRK06059 352 PAQAIAQVCELTWQLRG 368 (399)
T ss_pred CccHHHHHHHHHHHhcc
Confidence 45566666666666643
No 187
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=84.84 E-value=2.5 Score=44.93 Aligned_cols=80 Identities=16% Similarity=0.127 Sum_probs=50.1
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCC-ceeEecCC-------ccchhHHHHHHHHHHH
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGN-IRSYNLGG-------MGCSAGVIAVDLAKDL 260 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~-v~~~dl~g-------mGCsggl~aL~lA~~l 260 (390)
+..|++++++++|++|+|||++=+..| .|....+-.+.||+.++ -..+|++| .+-+.++..+--+...
T Consensus 294 ~~~aa~~a~~~AGi~~~Did~~elydc----F~~~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~Q 369 (498)
T PRK08257 294 IRAAGRRALALAGLGIDDIDAFDLYSC----FPSAVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVER 369 (498)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEeccC----CHHHHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHH
Confidence 356999999999999999999865433 45566667799998754 12466655 1222245554434444
Q ss_pred HhcCCCCeEEEE
Q 016389 261 LQVNWNTYAVVV 272 (390)
Q Consensus 261 L~a~~~~~aLVV 272 (390)
|+..+.+++|+.
T Consensus 370 LRg~~~~~gLv~ 381 (498)
T PRK08257 370 LRANPGRRGLVT 381 (498)
T ss_pred HhhcCCCEEEEE
Confidence 444344445444
No 188
>PRK08256 lipid-transfer protein; Provisional
Probab=84.66 E-value=3 Score=42.56 Aligned_cols=70 Identities=14% Similarity=0.191 Sum_probs=50.0
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCc----------------eeEecCC--------
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNI----------------RSYNLGG-------- 244 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v----------------~~~dl~g-------- 244 (390)
...|++++++++|++++|||.+-++- ..+....+..+.||+.+.= ..+|.+|
T Consensus 266 ~~~a~~~a~~~ag~~~~DiD~~ei~d----~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp 341 (391)
T PRK08256 266 TRAAAQQVYEQAGIGPEDIDVVELHD----CFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHP 341 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeecc----CCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCC
Confidence 45799999999999999999986552 2345566667888887531 1466665
Q ss_pred ccchhHHHHHHHHHHHHh
Q 016389 245 MGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 245 mGCsggl~aL~lA~~lL~ 262 (390)
.||+|...-.+++++|-.
T Consensus 342 ~gasG~~~~~e~~~QL~g 359 (391)
T PRK08256 342 LGATGLAQCAELTWQLRG 359 (391)
T ss_pred ccHHHHHHHHHHHHHhcC
Confidence 466777777777777754
No 189
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=84.64 E-value=3.1 Score=40.62 Aligned_cols=91 Identities=10% Similarity=0.074 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCC-Cce------eEecCCccchhHHHH
Q 016389 181 AREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRG-NIR------SYNLGGMGCSAGVIA 253 (390)
Q Consensus 181 ~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~-~v~------~~dl~gmGCsggl~a 253 (390)
..+.+.....++++++|++.|++ +|||+++..-... |..-..+.++++++. .+. .-+.+.+||+..+++
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~ 292 (324)
T cd00827 217 VFEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG---KKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLG 292 (324)
T ss_pred hHHHHhHHHHHHHHHHHHHcccc-cccceeeccCchH---HHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHH
Confidence 44667788889999999999999 9999887553211 166778889999742 111 123455777777777
Q ss_pred HHHHHHHHhcCCCCeEEEEEec
Q 016389 254 VDLAKDLLQVNWNTYAVVVSTE 275 (390)
Q Consensus 254 L~lA~~lL~a~~~~~aLVVstE 275 (390)
|+-+-.--+-.++.++++++..
T Consensus 293 L~~~~~~~~~~~Gd~vl~~~~G 314 (324)
T cd00827 293 LASLLESGKLKAGDRVLLFSYG 314 (324)
T ss_pred HHHHHhcCCCCCCCEEEEEEec
Confidence 7655322222246788888754
No 190
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=84.61 E-value=1.9 Score=44.27 Aligned_cols=66 Identities=18% Similarity=0.232 Sum_probs=45.6
Q ss_pred HHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHHHh
Q 016389 191 GALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 191 ~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~lL~ 262 (390)
.+++++++++|++|+|||.+=++- ..+....+..+.||+.+ ..+|.+| .||+|....++++.+|-.
T Consensus 295 ~a~~~al~~Agi~~~Did~~Ei~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~ 368 (394)
T PLN02644 295 LAIPKALKHAGLEASQVDYYEINE----AFSVVALANQKLLGLDP--EKVNVHGGAVSLGHPIGCSGARILVTLLGVLRS 368 (394)
T ss_pred HHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCCc--cccCCCCChHhhCCCHHHHHHHHHHHHHHHHHh
Confidence 599999999999999999987642 22344555678888753 2355554 356666666666666643
No 191
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=84.25 E-value=2.5 Score=43.06 Aligned_cols=91 Identities=11% Similarity=0.048 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeec-CCCCCCCHHHHHHHHcCCCCC-----------ceeEecCCccchh
Q 016389 182 REEAEQVMYGALDNLFSNTNVNPKDIGILVVNCS-LFNPTPSLSAMIVNKYRLRGN-----------IRSYNLGGMGCSA 249 (390)
Q Consensus 182 ~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s-~~~~~Psla~~I~~~LgLr~~-----------v~~~dl~gmGCsg 249 (390)
.+...+...++++++++++|++++|||.+|+..- ......+.. .+.++++.+.+ ...=.+++++|++
T Consensus 200 ~~~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~~-~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas 278 (379)
T TIGR01835 200 NEQYLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKALR-HILKKNYEDEDESVQNAYLESIIYNREVGNLYTGS 278 (379)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHHH-HHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHH
Confidence 3445556678899999999999999999987652 111111222 34566665521 0122566677777
Q ss_pred HHHHHHHHHHHH-hcCCCCeEEEEE
Q 016389 250 GVIAVDLAKDLL-QVNWNTYAVVVS 273 (390)
Q Consensus 250 gl~aL~lA~~lL-~a~~~~~aLVVs 273 (390)
-..+|.-+.+-- +-.+++++++++
T Consensus 279 ~~l~L~~~l~~~~~~~~Gd~ill~s 303 (379)
T TIGR01835 279 LYLGLASLLENAFEDTTGDKIGLFS 303 (379)
T ss_pred HHHHHHHHHHhcccCCCCCEEEEEE
Confidence 777776443210 113456666654
No 192
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=84.11 E-value=2.3 Score=42.97 Aligned_cols=71 Identities=11% Similarity=0.156 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCce-eE--e-cCCccchhHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIR-SY--N-LGGMGCSAGVIAVDLA 257 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~-~~--d-l~gmGCsggl~aL~lA 257 (390)
+.+....-++++++|+++|++++|||++|++ ++.+.+-..+.++||++++-. .. + .++++.++...+|+-+
T Consensus 238 ~~~~~~~~~~i~~~L~~~gl~~~did~~v~H----Q~~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~ 312 (353)
T PRK12880 238 NMALECEPKSFKEILEFSKVDEKDIAFHLFH----QSNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCEL 312 (353)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEC----CCCHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHH
Confidence 3455666778999999999999999999976 334456678999999986422 11 2 3456666666666633
No 193
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=83.89 E-value=3.9 Score=42.61 Aligned_cols=91 Identities=11% Similarity=0.118 Sum_probs=55.8
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcC-----------------CCCCceeEecCC--------
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYR-----------------LRGNIRSYNLGG-------- 244 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~Lg-----------------Lr~~v~~~dl~g-------- 244 (390)
..|++++++++|++|+|||++=++-+ .+...-+-.+.|| +..+ .+|.+|
T Consensus 314 ~~a~~~al~~Agl~~~Did~~Ei~da----Fa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~--pvN~~GG~la~GhP 387 (430)
T TIGR02446 314 SYATPLALQRAGLALSDLTLIDMHEA----FAAQTLANVQMFASDKFAQENLGRSKAMGEIDMS--KFNVLGGSIAYGHP 387 (430)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeccc----cHHHHHHHHHHhcCcchhhhcccccccCCCCCCC--ccCCCCCHHhcCCC
Confidence 46899999999999999999875522 2233333345553 2111 466665
Q ss_pred ccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcCcccCCCcccccccccccCCceEEEeec
Q 016389 245 MGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSN 307 (390)
Q Consensus 245 mGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~~~~~~drs~lv~~~LFgDGAAAvLLs~ 307 (390)
.|++|...-++++++|-.... ++. +...|..|-.++|+++++
T Consensus 388 ~gatG~~~v~e~~~qL~g~ag-~~g--------------------~~~~~~~GG~g~a~iie~ 429 (430)
T TIGR02446 388 FAATGARMITQTLRELKRRGG-GLG--------------------LNTACAAGGLGAAMILEV 429 (430)
T ss_pred ccccHHHHHHHHHHHHhhcCC-Ccc--------------------EEEEEecCcceEEEEEEe
Confidence 456666666777777764332 221 223566676667777764
No 194
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=83.43 E-value=2.7 Score=42.89 Aligned_cols=49 Identities=14% Similarity=0.209 Sum_probs=34.3
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG 244 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g 244 (390)
..|++++++++|++|+|||++=+.- ..+....+..+.||+.. ..+|.+|
T Consensus 289 ~~a~~~a~~~Agi~~~did~~e~~d----~fa~~~~~~~e~lG~~~--~pvn~~G 337 (386)
T TIGR01930 289 VPAIPKALKKAGLSISDIDLFEINE----AFAAQVLACIKELGLDL--EKVNVNG 337 (386)
T ss_pred HHHHHHHHHHcCCCHHHCCeeehcc----hhHHHHHHHHHHhCCCh--hhcCCCC
Confidence 4899999999999999999985431 22344445568898842 2356555
No 195
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=83.24 E-value=1.9 Score=44.28 Aligned_cols=69 Identities=19% Similarity=0.274 Sum_probs=45.8
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHH
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDL 260 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~l 260 (390)
...|+++||+++|++|+|||++=++=. ......+-.+.||++. ..+|++| .|++|....+.++.+|
T Consensus 292 ~~~a~~~Al~~AGl~p~DID~~ei~da----fa~~~l~~~~~l~~~~--~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL 365 (392)
T PRK06633 292 PVPASQKALSKAGWSVNDLEVIEVNEA----FAAQSIYVNREMKWDM--EKVNINGGAIAIGHPIGASGGRVLITLIHGL 365 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehhhH----HHHHHHHHHhhhCCCc--cccCCCCchHhhCCcHHHHHHHHHHHHHHHH
Confidence 367899999999999999999875411 1111112235566542 2455555 5788888888888888
Q ss_pred Hhc
Q 016389 261 LQV 263 (390)
Q Consensus 261 L~a 263 (390)
-+.
T Consensus 366 ~~~ 368 (392)
T PRK06633 366 RRA 368 (392)
T ss_pred Hhc
Confidence 664
No 196
>PLN03169 chalcone synthase family protein; Provisional
Probab=83.01 E-value=4.5 Score=41.52 Aligned_cols=89 Identities=12% Similarity=0.202 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCcee------EecCCccchhHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS------YNLGGMGCSAGVIAVDL 256 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~------~dl~gmGCsggl~aL~l 256 (390)
+.+..-.-+.++++|++.|++++|||.+.+.. ++....+-..++++||++++-.. -+.++|++++-+.+|+.
T Consensus 277 ~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~--Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~ 354 (391)
T PLN03169 277 QKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAV--HPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEY 354 (391)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCcceEEe--cCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHH
Confidence 34455556678999999999999999432222 22234567778999999865321 24567888888888876
Q ss_pred HHHH--Hh-cCCCCeEEEEE
Q 016389 257 AKDL--LQ-VNWNTYAVVVS 273 (390)
Q Consensus 257 A~~l--L~-a~~~~~aLVVs 273 (390)
+.+- ++ ..++.++|+++
T Consensus 355 ~~~~~~~~~~~~gd~~ll~a 374 (391)
T PLN03169 355 MREELKKKGEEDEEWGLILA 374 (391)
T ss_pred HHHhhcccCCCCCcEEEEEE
Confidence 6432 22 12356777665
No 197
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=81.72 E-value=3 Score=42.43 Aligned_cols=69 Identities=19% Similarity=0.194 Sum_probs=46.4
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCc----------------eeEecCC--------
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNI----------------RSYNLGG-------- 244 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v----------------~~~dl~g-------- 244 (390)
...|++++++++|++|+|||.+-++-+ .+....+..+.||+.+.- ..+|.+|
T Consensus 259 ~~~a~~~al~~Agi~~~DiD~~ei~d~----ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GhP 334 (385)
T PRK12578 259 TQLAARQAYNMAKVTPNDIEVATVHDA----FTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFGGLKAKGHP 334 (385)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCc----ChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCCcccCCCC
Confidence 457999999999999999999765422 335566677888885420 1477766
Q ss_pred ccchhHHHHHHHHHHHH
Q 016389 245 MGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 245 mGCsggl~aL~lA~~lL 261 (390)
.||+|.-.-++++++|-
T Consensus 335 ~gatG~~~v~e~~~qLr 351 (385)
T PRK12578 335 LGATGLSMIYEITKQLR 351 (385)
T ss_pred ccHHHHHHHHHHHHHHh
Confidence 34555555555555553
No 198
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=81.16 E-value=3 Score=43.03 Aligned_cols=71 Identities=17% Similarity=0.204 Sum_probs=47.6
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHH
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDL 260 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~l 260 (390)
...|++++++++|++|+|||.+=++-+ .....-...+.||+..+-..+|.+| .|++|....++++++|
T Consensus 298 ~~~a~~~a~~~agl~~~did~~ei~d~----Fa~~~l~~~e~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL 373 (401)
T PRK08131 298 PVEAIKKALARAGLTLDDMDIIEINEA----FASQVLGCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAAREL 373 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCeehhccH----HHHHHHHHHHHcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHHHHH
Confidence 358999999999999999999875521 1122334557888843223466665 3566767777777777
Q ss_pred Hhc
Q 016389 261 LQV 263 (390)
Q Consensus 261 L~a 263 (390)
-..
T Consensus 374 ~~~ 376 (401)
T PRK08131 374 QRR 376 (401)
T ss_pred Hhc
Confidence 543
No 199
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=81.01 E-value=3.8 Score=42.79 Aligned_cols=70 Identities=14% Similarity=0.192 Sum_probs=50.0
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCC----------------ceeEecCC--------
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGN----------------IRSYNLGG-------- 244 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~----------------v~~~dl~g-------- 244 (390)
+..|++++++++|++|+|||.+=++-+ .+....+..+.||+.+. -..+|.+|
T Consensus 311 ~~~A~~~a~~~AGl~~~DiD~~Ei~da----Fa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GHP 386 (438)
T PTZ00455 311 SRAAAQKALSMAGVKPSDLQVAEVHDC----FTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFGHP 386 (438)
T ss_pred HHHHHHHHHHHcCCCHHHCcEeeeccc----ChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcCCC
Confidence 478999999999999999999876532 34556666788888652 13577776
Q ss_pred ccchhHHHHHHHHHHHHh
Q 016389 245 MGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 245 mGCsggl~aL~lA~~lL~ 262 (390)
.||+|...-.+++++|-.
T Consensus 387 ~gAtG~~~v~e~~~QLrg 404 (438)
T PTZ00455 387 VGATGVKQIMEVYRQMKG 404 (438)
T ss_pred cchHHHHHHHHHHHHHhh
Confidence 355666666667766654
No 200
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=79.90 E-value=6.1 Score=41.09 Aligned_cols=79 Identities=15% Similarity=0.151 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHH---HHcCCC------------CCceeEecCC--------
Q 016389 188 VMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIV---NKYRLR------------GNIRSYNLGG-------- 244 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~---~~LgLr------------~~v~~~dl~g-------- 244 (390)
....|++++++++|++|+|||.+=++-+ .+...-+-. +.+|+- .+-..+|.+|
T Consensus 310 ~~~~a~~~a~~~AGl~~~Did~~Ei~d~----Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP 385 (427)
T PRK09268 310 APAYAVPRLLARNGLTLQDFDFYEIHEA----FASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHP 385 (427)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEeccc----cHHHHHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCC
Confidence 3456999999999999999999987632 111111111 222221 0112456655
Q ss_pred ccchhHHHHHHHHHHHHhcCCCCeEEE
Q 016389 245 MGCSAGVIAVDLAKDLLQVNWNTYAVV 271 (390)
Q Consensus 245 mGCsggl~aL~lA~~lL~a~~~~~aLV 271 (390)
.|++|....+.++++|-.. ..++.|+
T Consensus 386 ~gATG~~~v~e~~~QL~~~-~~~~gl~ 411 (427)
T PRK09268 386 FAATGGRIVATLAKLLAEK-GSGRGLI 411 (427)
T ss_pred cccchHHHHHHHHHHHHhc-CCCEEEE
Confidence 3677777778888877653 3455544
No 201
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=79.81 E-value=5.2 Score=41.55 Aligned_cols=25 Identities=8% Similarity=0.037 Sum_probs=22.2
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEe
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVN 213 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~ 213 (390)
...|++++|+++|++++|||.+=++
T Consensus 311 ~~~a~~~al~~AGl~~~DiD~~Ei~ 335 (428)
T PRK08963 311 PAYATPLALERAGLTLADLTLIDMH 335 (428)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 4578999999999999999998765
No 202
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=79.06 E-value=0.47 Score=40.09 Aligned_cols=76 Identities=13% Similarity=0.204 Sum_probs=43.2
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEee-cCCCCCCCHHHHHHHHcCCCC---Ccee----EecCCccchhHHHHHHHHHHH
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRLRG---NIRS----YNLGGMGCSAGVIAVDLAKDL 260 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~-s~~~~~Psla~~I~~~LgLr~---~v~~----~dl~gmGCsggl~aL~lA~~l 260 (390)
..++++++|+++|++|+|||.|.... .+...-+.-..-+.+-|+-.. .+.- -.++....++|+.+|-.+-..
T Consensus 27 ~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~ 106 (119)
T PF02801_consen 27 LARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALLA 106 (119)
T ss_dssp HHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHHH
Confidence 36779999999999999999998554 322112233334444454321 1221 124556778888777777766
Q ss_pred HhcC
Q 016389 261 LQVN 264 (390)
Q Consensus 261 L~a~ 264 (390)
++.+
T Consensus 107 l~~~ 110 (119)
T PF02801_consen 107 LEHG 110 (119)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 6654
No 203
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=77.88 E-value=7 Score=40.53 Aligned_cols=25 Identities=16% Similarity=0.240 Sum_probs=22.6
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEe
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVN 213 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~ 213 (390)
...|++++++++|++|+|||++=++
T Consensus 309 ~~~a~~~al~~aGl~~~did~~ei~ 333 (426)
T PRK08170 309 PVHAATPLLQRHGLTLEDLDLWEIN 333 (426)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec
Confidence 4589999999999999999998766
No 204
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=77.86 E-value=7.8 Score=37.33 Aligned_cols=92 Identities=14% Similarity=0.162 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHH-HHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcC
Q 016389 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSA-MIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (390)
Q Consensus 186 ~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~-~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~ 264 (390)
..-...-++++|++++++++|||++.+.-.++...|=... .+++-+.+--+..-..++. |-|- |++.+..- ..
T Consensus 50 r~~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~kPlv~VNH--CigH---IEMGR~iT-gA 123 (336)
T KOG2708|consen 50 RAWILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNKPLVGVNH--CIGH---IEMGREIT-GA 123 (336)
T ss_pred HHHHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCCCcccchh--hhhh---hhhcceec-cC
Confidence 3445566788999999999999999988888777775443 3444454433444455553 7654 44444333 33
Q ss_pred CCCeEEEEEeccCCcCccc
Q 016389 265 WNTYAVVVSTENITQNWYF 283 (390)
Q Consensus 265 ~~~~aLVVstE~~S~~~~~ 283 (390)
.+..+|-||+-+.-...|.
T Consensus 124 ~nPvvLYvSGGNTQvIAYs 142 (336)
T KOG2708|consen 124 QNPVVLYVSGGNTQVIAYS 142 (336)
T ss_pred CCCEEEEEeCCceEEEEEc
Confidence 4678999998876554443
No 205
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=77.25 E-value=9.3 Score=39.20 Aligned_cols=43 Identities=14% Similarity=0.161 Sum_probs=33.8
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCC
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRG 235 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~ 235 (390)
...|++++++++|++|+|||++-++- ..+....+..+.||+-+
T Consensus 278 ~~~aa~~a~~~Agi~~~Didv~el~D----~fa~~~l~~le~lGl~~ 320 (403)
T PRK06289 278 VRQAVLDAYRRAGVGLDDLDGFEVHD----CFTPSEYLAIDHIGLTG 320 (403)
T ss_pred HHHHHHHHHHHcCCCHHHCeEEeeec----cchHHHHHHHHHcCCCC
Confidence 45799999999999999999987652 23455667778888764
No 206
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=76.91 E-value=10 Score=39.44 Aligned_cols=70 Identities=14% Similarity=0.082 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHcCCCC--CCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCC----------------ceeEecCC-----
Q 016389 188 VMYGALDNLFSNTNVN--PKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGN----------------IRSYNLGG----- 244 (390)
Q Consensus 188 la~~Aa~~aL~kagi~--p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~----------------v~~~dl~g----- 244 (390)
....|++++++++|++ ++|||.+=++-+ .+....+..+.||+-+. -..+|.+|
T Consensus 294 ~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~----Fa~~~l~~lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~ 369 (430)
T PRK06365 294 AGRMAAKEAYEMAGITDPLNDLDLIELHDA----YTSSEIQTYEDLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAA 369 (430)
T ss_pred HHHHHHHHHHHHcCCCCCHHHCCEEEeecC----CcHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcC
Confidence 3458999999999997 799999876532 33444555678887642 12466665
Q ss_pred ---ccchhHHHHHHHHHHHH
Q 016389 245 ---MGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 245 ---mGCsggl~aL~lA~~lL 261 (390)
.||+|.....++.++|-
T Consensus 370 Ghp~GatG~~~~~e~~~QLr 389 (430)
T PRK06365 370 GHAVGATGIMQAVFMFWQLQ 389 (430)
T ss_pred CCcccHHHHHHHHHHHHHHh
Confidence 35555555555555554
No 207
>PRK07937 lipid-transfer protein; Provisional
Probab=76.20 E-value=8.7 Score=38.92 Aligned_cols=75 Identities=11% Similarity=0.042 Sum_probs=48.1
Q ss_pred HHHHHHHc-CCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC-------ccchhHHHHHHHHHHHHhc
Q 016389 192 ALDNLFSN-TNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG-------MGCSAGVIAVDLAKDLLQV 263 (390)
Q Consensus 192 Aa~~aL~k-agi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g-------mGCsggl~aL~lA~~lL~a 263 (390)
++++++++ +|++|+|||.+=+.- ..+....+..+.||+..+. .+|.+| .||+|...-+++++++...
T Consensus 251 ~~~~a~~~aAgi~~~diD~~Ei~D----~F~~~~l~~~e~lGl~g~~-pvN~~GG~l~ghp~gatG~~~~~e~~~QL~g~ 325 (352)
T PRK07937 251 STALAAEAATGGDAGGVDVAELHA----PFTHQELILREALGLGDKT-KVNPSGGALAANPMFAAGLERIGEAARHIWDG 325 (352)
T ss_pred HHHHHHHHhcCCCHHHCCEEEEeC----CChHHHHHHHHHcCCCCCC-CcCCCccchhcCchhHHHHHHHHHHHHHHhcc
Confidence 34445555 599999999986542 3456666778999996543 477766 3565666666666666543
Q ss_pred CCCCeEEEE
Q 016389 264 NWNTYAVVV 272 (390)
Q Consensus 264 ~~~~~aLVV 272 (390)
..+++|+.
T Consensus 326 -~a~~~l~~ 333 (352)
T PRK07937 326 -SARRALAH 333 (352)
T ss_pred -CCCEEEEe
Confidence 23555554
No 208
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=72.98 E-value=5.5 Score=40.23 Aligned_cols=77 Identities=14% Similarity=0.098 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEe-ecCCCCCCCHHHHHHHHcCCC-CCce----eEecCCccchhHHHHHHHHHHHH
Q 016389 188 VMYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLR-GNIR----SYNLGGMGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dId~LIv~-~s~~~~~Psla~~I~~~LgLr-~~v~----~~dl~gmGCsggl~aL~lA~~lL 261 (390)
-..++++++|+++|++++|||++... +++..--+.-..-+.+-++-+ ..+. .-.++...+++|+.++-.+-..|
T Consensus 276 ~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l 355 (406)
T cd00834 276 GAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLAL 355 (406)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHH
Confidence 34578999999999999999999865 443332333333444555542 1111 11234456777777777777777
Q ss_pred hcC
Q 016389 262 QVN 264 (390)
Q Consensus 262 ~a~ 264 (390)
+.+
T Consensus 356 ~~~ 358 (406)
T cd00834 356 RDG 358 (406)
T ss_pred hcC
Confidence 765
No 209
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=72.46 E-value=15 Score=37.55 Aligned_cols=70 Identities=14% Similarity=0.212 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHcCCCC--CCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCC----------------ceeEecCC-----
Q 016389 188 VMYGALDNLFSNTNVN--PKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGN----------------IRSYNLGG----- 244 (390)
Q Consensus 188 la~~Aa~~aL~kagi~--p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~----------------v~~~dl~g----- 244 (390)
....|++++++++|++ ++|||++=+.. ..|....+..+.||+.++ -..+|.+|
T Consensus 256 ~~~~a~~~a~~~Agi~~p~~Did~~el~d----~F~~~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~l~g 331 (386)
T PRK08313 256 AGRDAAAALWKAAGITDPRDEIDVAEIYV----PFSWFEPMWLENLGFAPEGEGWKLTEAGETAIGGRLPVNPSGGVLSS 331 (386)
T ss_pred HHHHHHHHHHHHcCCCCChhhCCEEEecc----CChHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCccccc
Confidence 3457999999999997 69999875442 234455566678887643 11355555
Q ss_pred --ccchhHHHHHHHHHHHH
Q 016389 245 --MGCSAGVIAVDLAKDLL 261 (390)
Q Consensus 245 --mGCsggl~aL~lA~~lL 261 (390)
.||+|...-++..++|-
T Consensus 332 ~p~gatG~~~~~e~~~qlr 350 (386)
T PRK08313 332 NPIGASGMIRFAEAALQVM 350 (386)
T ss_pred CCCcHHHHHHHHHHHHHhc
Confidence 45656555566666554
No 210
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=71.85 E-value=6.4 Score=39.99 Aligned_cols=77 Identities=13% Similarity=0.089 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCcCEEEEe-ecCCCCCCCHHHHHHHHcCCC-CCce--e--EecCCccchhHHHHHHHHHHH
Q 016389 187 QVMYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLR-GNIR--S--YNLGGMGCSAGVIAVDLAKDL 260 (390)
Q Consensus 187 ~la~~Aa~~aL~kagi~p~dId~LIv~-~s~~~~~Psla~~I~~~LgLr-~~v~--~--~dl~gmGCsggl~aL~lA~~l 260 (390)
.-..+|++++|+++|++|+|||++... +++...-+.-..-+.+-+|-. ..+. + -.++....++|+..+-.+-..
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~ 353 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQS 353 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHH
Confidence 445678999999999999999999844 444332333333344444421 1111 1 123344455555555555445
Q ss_pred Hhc
Q 016389 261 LQV 263 (390)
Q Consensus 261 L~a 263 (390)
++.
T Consensus 354 l~~ 356 (407)
T cd00828 354 LEH 356 (407)
T ss_pred Hhc
Confidence 554
No 211
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=71.79 E-value=10 Score=39.07 Aligned_cols=74 Identities=11% Similarity=0.029 Sum_probs=42.5
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEe-ecCCCCCCCHHHHHHHHcCCC-CCceeEecCCccchhHHHHHHHHHHHHhcC
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLR-GNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~-~s~~~~~Psla~~I~~~LgLr-~~v~~~dl~gmGCsggl~aL~lA~~lL~a~ 264 (390)
..++++++|+++|+ |+|||.|..+ |++..--..=..-|.+-++.+ ..+++. ++....++|...+-.+--.|+.+
T Consensus 282 ~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~pvsS~Ks~-~GH~l~AAGa~e~i~~~lal~~g 357 (398)
T PRK06519 282 LEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAGPVRGIGTL-FGHTMEAQFPLGLALAALSVSKG 357 (398)
T ss_pred HHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCCCccccchh-hccchHHHHHHHHHHHHHHHhcC
Confidence 46899999999999 8999998744 444322223344455666643 234543 33333444444444444444443
No 212
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=71.37 E-value=14 Score=37.44 Aligned_cols=93 Identities=16% Similarity=0.138 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCH--HHHHHHHcCCCCCceeEecCCccchhHHHHHHHHH
Q 016389 181 AREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSL--SAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAK 258 (390)
Q Consensus 181 ~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psl--a~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~ 258 (390)
+|++. +-....++++|+++|++.+|||++-++..++. .|++ -...++.|-+.-+.+-+.++. |-|=+.+-.+..
T Consensus 47 sr~H~-e~i~~li~~al~eA~~~~~dID~IA~T~gPGL-~gaL~VG~~~Ak~LA~a~~kPli~VnH--~~gHi~a~~l~~ 122 (342)
T COG0533 47 SRHHV-ENIPPLIEEALAEAGVSLEDIDAIAVTAGPGL-GGALLVGATAAKALALALNKPLIPVNH--LEGHIEAARLET 122 (342)
T ss_pred HHHHH-HHHHHHHHHHHHHcCCCcccCCEEEEecCCCc-hhHHHHHHHHHHHHHHHhCCCEeecch--HHHHHHHHHhcc
Confidence 34443 34557889999999999999999998877664 3442 334456665555666777875 777666655544
Q ss_pred HHHhcCCCCeEEEEEeccCCcC
Q 016389 259 DLLQVNWNTYAVVVSTENITQN 280 (390)
Q Consensus 259 ~lL~a~~~~~aLVVstE~~S~~ 280 (390)
+. ...--+|+||+-.....
T Consensus 123 ~~---~~p~v~LlVSGGHTqli 141 (342)
T COG0533 123 GL---AFPPVALLVSGGHTQLI 141 (342)
T ss_pred CC---CCCcEEEEEecCceEEE
Confidence 33 23567889987665543
No 213
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=71.31 E-value=19 Score=36.91 Aligned_cols=43 Identities=7% Similarity=0.064 Sum_probs=32.1
Q ss_pred HHHHHHHHHHcCCCC--CCCcCEEEEeecCCCCCCCHHHHHHHHcCCCC
Q 016389 189 MYGALDNLFSNTNVN--PKDIGILVVNCSLFNPTPSLSAMIVNKYRLRG 235 (390)
Q Consensus 189 a~~Aa~~aL~kagi~--p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~ 235 (390)
...|++++++++|++ ++|||.+=++- +.+...-+..+.||+.+
T Consensus 268 ~~~aa~~a~~~AGl~~~~~Did~~Ei~D----~Fs~~~l~~~e~lGl~~ 312 (398)
T PRK06157 268 TRIAARKAYREAGITDPREELSMAEVHD----CFSITELVTMEDLGLSE 312 (398)
T ss_pred HHHHHHHHHHHcCCCCchhcCCEEEEec----CChHHHHHHHHHcCCCC
Confidence 457999999999998 79999986542 23345566678888764
No 214
>PRK07855 lipid-transfer protein; Provisional
Probab=71.18 E-value=13 Score=38.17 Aligned_cols=41 Identities=12% Similarity=0.180 Sum_probs=28.5
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCC
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 234 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr 234 (390)
..|++++++++|++|+|||.+=+.-+ .+....+..+.||+-
T Consensus 269 ~~aa~~a~~~AGi~~~DiDv~El~D~----Ft~~~l~~~E~lG~~ 309 (386)
T PRK07855 269 GLVARQLWAQSGLGPADIDTAILYDH----FTPFVLMQLEELGFC 309 (386)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEeccC----CcHHHHHHHHHcCCC
Confidence 47999999999999999999865422 233334444555554
No 215
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=70.03 E-value=6.8 Score=39.92 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=29.1
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEe-ecCCCCCCCHHHHHHHHcC
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYR 232 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~-~s~~~~~Psla~~I~~~Lg 232 (390)
..|++++|+++|++|+|||++-.. +.+...-+.-..-+.+-+|
T Consensus 279 ~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~ 322 (411)
T PRK07314 279 ARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFG 322 (411)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhc
Confidence 478999999999999999999744 3332222333334455555
No 216
>PRK06158 thiolase; Provisional
Probab=67.77 E-value=16 Score=37.27 Aligned_cols=42 Identities=10% Similarity=0.135 Sum_probs=31.3
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCC
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 234 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr 234 (390)
...|++++++++|++|+|||++=+.- ..|....+..+.||+-
T Consensus 256 ~~~aa~~A~~~AGi~p~DId~~ElyD----~Fs~~~l~~~E~lG~~ 297 (384)
T PRK06158 256 AAESGPRAFAMAGLTPADIDVVELYD----AFTINTILFLEDLGFC 297 (384)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEecC----CchHHHHHHHHHcCCC
Confidence 45799999999999999999986542 2344555566777764
No 217
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=67.64 E-value=12 Score=37.84 Aligned_cols=47 Identities=13% Similarity=0.096 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCcCEEEEe-ecCCCCCCCHHHHHHHHcCC
Q 016389 187 QVMYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRL 233 (390)
Q Consensus 187 ~la~~Aa~~aL~kagi~p~dId~LIv~-~s~~~~~Psla~~I~~~LgL 233 (390)
.-...|++++|+++|++|+|||.+-+. |++..--|.=..-|.+-||-
T Consensus 206 ~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 206 DGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 345678999999999999999987644 44433334445556666663
No 218
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=67.49 E-value=10 Score=38.43 Aligned_cols=45 Identities=13% Similarity=0.155 Sum_probs=31.2
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEe-ecCCCCCCCHHHHHHHHcCC
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRL 233 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~-~s~~~~~Psla~~I~~~LgL 233 (390)
..+|++++|+++|++|+|||.+... |.+..--+.-...+.+.+|-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 4578999999999999999998744 44433334444445566653
No 219
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=67.21 E-value=9 Score=39.27 Aligned_cols=76 Identities=13% Similarity=0.226 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEe-ecCCCCCCCHHHHHHHHcCCCC-Cc---eeEecCCccchhHHHHHHHHHHHHh
Q 016389 188 VMYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLRG-NI---RSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dId~LIv~-~s~~~~~Psla~~I~~~LgLr~-~v---~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
-..+|++++|+++|++|+|||.+... |++..--+.-..-|.+-||-.. .+ ++ .++...+++|+..+-.+-..|+
T Consensus 271 ~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~~~pv~s~K~-~~Gh~~~aaG~~~l~~~~l~l~ 349 (399)
T cd00832 271 GLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPRGVPVTAPKT-MTGRLYAGGAPLDVATALLALR 349 (399)
T ss_pred HHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCCCCceeCCCc-hhcchHHHHHHHHHHHHHHHHh
Confidence 45688999999999999999988744 4443334444445666666421 11 22 2344556666666655555565
Q ss_pred cC
Q 016389 263 VN 264 (390)
Q Consensus 263 a~ 264 (390)
.+
T Consensus 350 ~~ 351 (399)
T cd00832 350 DG 351 (399)
T ss_pred CC
Confidence 43
No 220
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=67.01 E-value=12 Score=40.32 Aligned_cols=75 Identities=9% Similarity=0.152 Sum_probs=42.0
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEe-ecCCCCCCCHHHHHHHHcCCCCC-----ceeEecCCccchhHHHHHHHHHHHHh
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLRGN-----IRSYNLGGMGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~-~s~~~~~Psla~~I~~~LgLr~~-----v~~~dl~gmGCsggl~aL~lA~~lL~ 262 (390)
..+|++++|+++|++|+|||.|-.. |++..--+.=..-|.+-+|-.+. ++++ ++....++|...+-.+-..++
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S~Ks~-iGH~~gAAGa~eli~~~lal~ 485 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSM-IGHLLGAAGAVEAIATVQAIR 485 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCCCCCceeeCCCCC-cCCCcccchHHHHHHHHHHHh
Confidence 4578999999999999999998743 44432222333345555653222 3333 333344444444444444455
Q ss_pred cC
Q 016389 263 VN 264 (390)
Q Consensus 263 a~ 264 (390)
.+
T Consensus 486 ~g 487 (540)
T PLN02787 486 TG 487 (540)
T ss_pred cC
Confidence 43
No 221
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=66.42 E-value=10 Score=38.74 Aligned_cols=74 Identities=14% Similarity=0.143 Sum_probs=42.7
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEe-ecCCCCCCCHHHHHHHHcCCCC---CceeEecCCccchhHHHHHHHHHHHHhcC
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLRG---NIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~-~s~~~~~Psla~~I~~~LgLr~---~v~~~dl~gmGCsggl~aL~lA~~lL~a~ 264 (390)
.++++++|+++|++|+|||.+..+ +.+..--+.=..-|.+-+|-+. .+++. ++...+++|+..+-.+-..|+.+
T Consensus 263 ~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~pv~s~K~~-~Gh~~~AaG~~~l~~~~~~l~~~ 340 (392)
T PRK09185 263 ILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDGVPCSSTKGL-TGHTLGAAGAVEAAICWLALRHG 340 (392)
T ss_pred HHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCCceeCCCcc-cccChhhcchHHHHHHHHHHhcC
Confidence 478999999999999999998754 3332222333334555555321 12222 34455556665555555455543
No 222
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=65.79 E-value=16 Score=37.63 Aligned_cols=77 Identities=16% Similarity=0.097 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHc-CCCCCCCcCEEEEe-ecCCCCCCCHHHHHHHHcCCCC--Ccee----EecCCccchhHHHHHHHHHH
Q 016389 188 VMYGALDNLFSN-TNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLRG--NIRS----YNLGGMGCSAGVIAVDLAKD 259 (390)
Q Consensus 188 la~~Aa~~aL~k-agi~p~dId~LIv~-~s~~~~~Psla~~I~~~LgLr~--~v~~----~dl~gmGCsggl~aL~lA~~ 259 (390)
-..+|++++|++ +|++|+|||.+-.+ |.+..--+.-..-+.+-+|-+. .+.. -.++....++|+..+-.+-.
T Consensus 284 ~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l 363 (421)
T PTZ00050 284 GARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTIL 363 (421)
T ss_pred HHHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHH
Confidence 456789999999 99999999999855 4432222222234556665321 1111 12344445555555544444
Q ss_pred HHhcC
Q 016389 260 LLQVN 264 (390)
Q Consensus 260 lL~a~ 264 (390)
.|+.+
T Consensus 364 ~l~~~ 368 (421)
T PTZ00050 364 SLYEQ 368 (421)
T ss_pred HHHcC
Confidence 55544
No 223
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=65.69 E-value=10 Score=39.45 Aligned_cols=69 Identities=16% Similarity=0.157 Sum_probs=41.3
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEE-EeecCCCCCCCHHHHHHHHcCCC------CCceeEecCCccchhHHHHHHHH
Q 016389 189 MYGALDNLFSNTNVNPKDIGILV-VNCSLFNPTPSLSAMIVNKYRLR------GNIRSYNLGGMGCSAGVIAVDLA 257 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LI-v~~s~~~~~Psla~~I~~~LgLr------~~v~~~dl~gmGCsggl~aL~lA 257 (390)
+.+|.+.+|+++|++|+|||.+- +.|||..--..=+.-|.+-+|=. ...+++-=+..|++|.+-++-..
T Consensus 278 a~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vsstKs~tGH~lGAaGaveai~~~ 353 (412)
T COG0304 278 AIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISL 353 (412)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhcccccCceeeecccccccChhhHHHHHHHHHH
Confidence 44899999999999999999999 55666443333333444444521 12344332334555555544433
No 224
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=65.62 E-value=16 Score=37.60 Aligned_cols=42 Identities=14% Similarity=0.094 Sum_probs=31.2
Q ss_pred HHHHHHHHHcCCCC--CCCcCEEEEeecCCCCCCCHHHHHHHHcCCCC
Q 016389 190 YGALDNLFSNTNVN--PKDIGILVVNCSLFNPTPSLSAMIVNKYRLRG 235 (390)
Q Consensus 190 ~~Aa~~aL~kagi~--p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~ 235 (390)
..|++++++++|++ ++|||.+=++= ..+....+..+.||+.+
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~D----~Ft~~~l~~~e~lG~~~ 302 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVDD----RYSYKELQHIEALRLSE 302 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEec----CChHHHHHHHHHcCCCC
Confidence 37999999999997 69999997662 23344556667888754
No 225
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=65.24 E-value=13 Score=38.52 Aligned_cols=44 Identities=11% Similarity=0.163 Sum_probs=29.9
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEe-ecCCCCCCCHHHHHHHHcC
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYR 232 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~-~s~~~~~Psla~~I~~~Lg 232 (390)
..++++++|+++|++|+|||.+... +++....+.=..-|.+-+|
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~ 335 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFG 335 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhc
Confidence 5688999999999999999999865 3333322333333445555
No 226
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=64.21 E-value=21 Score=33.72 Aligned_cols=88 Identities=11% Similarity=0.132 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCC-CHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcC
Q 016389 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTP-SLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (390)
Q Consensus 186 ~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~P-sla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~ 264 (390)
.+.....++++|+++|++++|||.++|++.++..|= =...-+++-|.+.-+++-+.++. |+....-.+..
T Consensus 38 se~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvss---------L~~~A~~~~~~ 108 (220)
T COG1214 38 AERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVSS---------LEALAQGGAEK 108 (220)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeCH---------HHHHHHhhhcc
Confidence 455667899999999999999999999998754331 24555667777777777777663 44444433333
Q ss_pred CCCeEEEEEeccCCcCccc
Q 016389 265 WNTYAVVVSTENITQNWYF 283 (390)
Q Consensus 265 ~~~~aLVVstE~~S~~~~~ 283 (390)
+...++| ..+.--..+|+
T Consensus 109 ~~~~v~v-~idArr~~vY~ 126 (220)
T COG1214 109 NAGFVLV-AIDARRGEVYW 126 (220)
T ss_pred CCCceEE-EEeccccceEe
Confidence 3344444 34544333443
No 227
>PRK12404 stage V sporulation protein AD; Provisional
Probab=63.51 E-value=28 Score=35.18 Aligned_cols=91 Identities=14% Similarity=0.191 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCC--------CceeEe------c--CCccchhHH
Q 016389 188 VMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRG--------NIRSYN------L--GGMGCSAGV 251 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~--------~v~~~d------l--~gmGCsggl 251 (390)
-|+..+.+=|+++|.+|+|-|+||+.-= ...--.+...+..+-|+.- .+.-|| - +|-|||+-+
T Consensus 207 AA~dti~~h~~d~~~~~~~yDlI~TGDL-g~vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~v 285 (334)
T PRK12404 207 AAVDTIEAHLRDRQIDASYYDLIVTGDL-GHVGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPGCSATV 285 (334)
T ss_pred HHHHHHHHHHHHhCCChhhccEEEEcch-HHHHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccchHHHH
Confidence 3556667778999999999999987631 1111123333444444421 123333 2 345677777
Q ss_pred HHHHHHHHHHhcCCCCeEEEEEecc-CCcC
Q 016389 252 IAVDLAKDLLQVNWNTYAVVVSTEN-ITQN 280 (390)
Q Consensus 252 ~aL~lA~~lL~a~~~~~aLVVstE~-~S~~ 280 (390)
..=.+-+.| +.+..+|+|+|.|-. +|+.
T Consensus 286 ~~g~~~~~~-~~g~~~rvL~v~TGALlS~~ 314 (334)
T PRK12404 286 TYGHLLNRM-KRGELKRILVVATGALLSPL 314 (334)
T ss_pred HHHHHHHHH-hcCCceEEEEEEchhhcCcc
Confidence 665554444 445679999999864 5543
No 228
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=63.48 E-value=23 Score=36.37 Aligned_cols=41 Identities=17% Similarity=0.110 Sum_probs=30.1
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCC
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRL 233 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgL 233 (390)
...|++++++++|++|+|||.+=+.-+ .|....+..+.||+
T Consensus 257 ~~~aa~~a~~~AGi~~~did~~elyD~----Fs~~~~~~~E~lGl 297 (388)
T PRK08142 257 AAWSGPAAFAEAGVTPADIKYASIYDS----FTITVLMQLEDLGF 297 (388)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEecc----chHHHHHHHHHcCC
Confidence 357999999999999999997654422 33445555677776
No 229
>PRK09604 UGMP family protein; Validated
Probab=62.83 E-value=27 Score=35.03 Aligned_cols=35 Identities=9% Similarity=0.107 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCC
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFN 218 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~ 218 (390)
.-.+.....++++|+++|++++|||.+.+++.++.
T Consensus 50 ~H~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~ 84 (332)
T PRK09604 50 AHVENIVPLIEEALKEAGLTLEDIDAIAVTAGPGL 84 (332)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCc
Confidence 33567778899999999999999999999988765
No 230
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=61.21 E-value=28 Score=34.34 Aligned_cols=84 Identities=14% Similarity=0.091 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHH--HHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhc
Q 016389 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLS--AMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (390)
Q Consensus 186 ~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla--~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a 263 (390)
.+.....++++|+++|++++|||.+.++..++.. +++- ...++.|..--+++.+.++.+-|-+ +..++.+
T Consensus 49 ~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~-tglrvg~~~Ak~la~~~~~p~~~v~hl~~ha-------~~a~~~s 120 (305)
T TIGR00329 49 AENIPPLLERALIESNVDKSEIDLIAYTQGPGLG-GSLRVGATFARSLALSLDKPLIGVNHLLGHI-------YAPRLDT 120 (305)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCch-hhHHHHHHHHHHHHHHhCCCEeecccHHHHH-------HHhhhhc
Confidence 4566688999999999999999999999987753 3322 2233444333344445555433322 2222233
Q ss_pred C---CCCeEEEEEeccC
Q 016389 264 N---WNTYAVVVSTENI 277 (390)
Q Consensus 264 ~---~~~~aLVVstE~~ 277 (390)
+ ...-+|+|++-..
T Consensus 121 ~~~~~~~l~l~vsGG~t 137 (305)
T TIGR00329 121 NILQFPFVSLLVSGGHT 137 (305)
T ss_pred CCCCCCcEEEEEcCCce
Confidence 3 2356677776533
No 231
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=61.13 E-value=13 Score=38.14 Aligned_cols=77 Identities=14% Similarity=0.171 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEe-ecCCCCCCCHHHHHHHHcCCCCCcee--EecCCccchhHHHHHHHHHHHHhcC
Q 016389 188 VMYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLRGNIRS--YNLGGMGCSAGVIAVDLAKDLLQVN 264 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dId~LIv~-~s~~~~~Psla~~I~~~LgLr~~v~~--~dl~gmGCsggl~aL~lA~~lL~a~ 264 (390)
...+|++++|+++|++|+|||.+-.. |++..--+.-..-|.+-+|=+..+-+ -.++....++|+..+-.+-..|+.+
T Consensus 255 ~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg~~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~ 334 (381)
T PRK05952 255 SAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFPHRVAVSSTKGATGHTLGASGALGVAFSLLALRHQ 334 (381)
T ss_pred HHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcCCCCeeecchhhhccChHHHHHHHHHHHHHHHhcC
Confidence 45789999999999999999998754 44332222223334444442111111 1233334445555554444445543
No 232
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=61.05 E-value=65 Score=32.20 Aligned_cols=114 Identities=11% Similarity=0.041 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCC-cCEEEEeecC-CCCCCCHHHHHHHHcC--CCCCceeEecCCccchhHHHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKD-IGILVVNCSL-FNPTPSLSAMIVNKYR--LRGNIRSYNLGGMGCSAGVIAVDLAK 258 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~d-Id~LIv~~s~-~~~~Psla~~I~~~Lg--Lr~~v~~~dl~gmGCsggl~aL~lA~ 258 (390)
+++.+=..++++++++|+|+++++ +.-|.+.-|. ++ |+.-..+.+.+. .+.-++.|.+.. +..-
T Consensus 43 ~~~~~rie~~i~~A~~k~g~d~~~~lr~lgL~lSg~d~--e~~~~~lv~~~R~~fps~ae~~~v~s----------Da~~ 110 (336)
T KOG1794|consen 43 TTCASRIEDMIREAKEKAGWDKKGPLRSLGLGLSGTDQ--EDKNRKLVTEFRDKFPSVAENFYVTS----------DADG 110 (336)
T ss_pred hHHHHHHHHHHHHHHhhcCCCccCccceeeeecccCCc--hhHHHHHHHHHHHhccchhheeeeeh----------hHHH
Confidence 456666778899999999999999 8888866443 43 555556665552 233345566643 2233
Q ss_pred HHHhcCC---CCeEEEEEeccCCcCcccCC-CcccccccccccCCceEEEeecc
Q 016389 259 DLLQVNW---NTYAVVVSTENITQNWYFGN-KKSMLIPNCLFRVGCSAVLLSNK 308 (390)
Q Consensus 259 ~lL~a~~---~~~aLVVstE~~S~~~~~~~-drs~lv~~~LFgDGAAAvLLs~~ 308 (390)
.+..+-| +..||+-+|....+.+.++- ....=...-+.|||++|..++.+
T Consensus 111 sl~a~t~g~~~GiVLiaGTgs~crl~~~DGs~~~~ggwg~~iGd~GSaywia~~ 164 (336)
T KOG1794|consen 111 SLAAATPGGEGGIVLIAGTGSNCRLVNPDGSEKGAGGWGHMIGDGGSAYWIARQ 164 (336)
T ss_pred HHhhcCCCCCCcEEEEecCCceeEEECCCCCccCCCCCCCccCCCcchhhhhhh
Confidence 3333334 57888888887665555432 11111123478999999988764
No 233
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=60.86 E-value=21 Score=36.30 Aligned_cols=27 Identities=11% Similarity=0.252 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEee
Q 016389 188 VMYGALDNLFSNTNVNPKDIGILVVNC 214 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dId~LIv~~ 214 (390)
....|++++|+++|++|+|||.+....
T Consensus 280 ~~~~a~~~al~~Agl~~~dId~i~~h~ 306 (424)
T smart00825 280 AQARLIRQALARAGVDPADVDYVEAHG 306 (424)
T ss_pred HHHHHHHHHHHHhCCCHHHccEEEeeC
Confidence 345789999999999999999998663
No 234
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=60.19 E-value=24 Score=35.53 Aligned_cols=76 Identities=18% Similarity=0.227 Sum_probs=50.0
Q ss_pred HHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHHHh
Q 016389 191 GALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 191 ~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~lL~ 262 (390)
-|+.++|+++|+..+|||+.=.|-. .-|-..+-.++||+.++ .+|.+| .||+|.=.-.-+-+.|=+
T Consensus 324 vAIp~alk~aGL~v~did~FEINEA----FAsQ~~yc~~KL~ld~e--kVN~~GGaiAlGHPlGatGAR~VaTlL~emKr 397 (435)
T KOG1389|consen 324 VAIPKALKAAGLEVDDIDLFEINEA----FASQALYCRNKLGLDPE--KVNVNGGAIALGHPLGATGARCVATLLHEMKR 397 (435)
T ss_pred hhhHHHHHHcCCcccccceeehhHH----HHHHHHHHHHHhCCCHH--HcCCCCceeeccCCcCCccHhHHHHHHHHHHh
Confidence 4788999999999999998766532 22445566799999754 355544 578887666555555555
Q ss_pred cCCCCeEEEE
Q 016389 263 VNWNTYAVVV 272 (390)
Q Consensus 263 a~~~~~aLVV 272 (390)
.+.+.+-=||
T Consensus 398 rgkd~~~GVv 407 (435)
T KOG1389|consen 398 RGKDCRFGVV 407 (435)
T ss_pred hccccccceE
Confidence 5443333344
No 235
>PRK14878 UGMP family protein; Provisional
Probab=60.02 E-value=11 Score=37.57 Aligned_cols=37 Identities=19% Similarity=0.151 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCC
Q 016389 181 AREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFN 218 (390)
Q Consensus 181 ~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~ 218 (390)
.+.+.+.+. .+++++|+++|++++|||.+.+++.++.
T Consensus 41 ~~~h~~~l~-~~i~~~l~~a~~~~~did~Iavt~gPG~ 77 (323)
T PRK14878 41 AQHHAEVAP-ELLRKALEKAGISIEDIDAVAVSQGPGL 77 (323)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHHHCCEEEEecCCCc
Confidence 345555555 9999999999999999999999987764
No 236
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=58.36 E-value=22 Score=37.72 Aligned_cols=89 Identities=16% Similarity=0.192 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHH--HHHHcCCCCCceeEecCCccchhHHHHHHHH
Q 016389 180 AAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAM--IVNKYRLRGNIRSYNLGGMGCSAGVIAVDLA 257 (390)
Q Consensus 180 ~~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~--I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA 257 (390)
+.+.+.+.+. .+++++|+++|++++|||.|.|...++. .+++-.- .++.|...-+++-+.++.+-|-+..
T Consensus 44 ~~~~H~~~l~-~~i~~~l~~~~~~~~~id~iav~~gPg~-~~~l~vg~~~ak~la~~~~~~~~~v~h~~aH~~~------ 115 (535)
T PRK09605 44 AAEHHAEAIP-KVIKEALEEAGLKPEDIDLVAFSQGPGL-GPCLRVVATAARALALSLDVPLIGVNHCVAHVEI------ 115 (535)
T ss_pred HHHHHHHHHH-HHHHHHHHHcCCCHhhCCEEEECCCCCc-HhhHHHHHHHHHHHHHHhCCCeecccHHHHHHHH------
Confidence 3455666665 9999999999999999999999887764 3443322 2333333333444555555554431
Q ss_pred HHHHhcC-CCCeEEEEEeccC
Q 016389 258 KDLLQVN-WNTYAVVVSTENI 277 (390)
Q Consensus 258 ~~lL~a~-~~~~aLVVstE~~ 277 (390)
.++.+. ...-+|+|++-..
T Consensus 116 -a~~~~~~~~~l~l~vsGg~t 135 (535)
T PRK09605 116 -GRLTTGAEDPVTLYVSGGNT 135 (535)
T ss_pred -hhhccCCCCCeEEEEecCCe
Confidence 112222 2246777776644
No 237
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=57.86 E-value=26 Score=35.47 Aligned_cols=28 Identities=14% Similarity=0.330 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCcCEEEEee
Q 016389 187 QVMYGALDNLFSNTNVNPKDIGILVVNC 214 (390)
Q Consensus 187 ~la~~Aa~~aL~kagi~p~dId~LIv~~ 214 (390)
.-..+|++++|+++|++|+|||.+...-
T Consensus 279 ~~~~~a~~~al~~Agi~~~did~i~~hg 306 (421)
T cd00833 279 EAQAALIRRAYARAGVDPSDIDYVEAHG 306 (421)
T ss_pred HHHHHHHHHHHHHhCCCHHHCcEEEeeC
Confidence 3456899999999999999999998654
No 238
>PLN03170 chalcone synthase; Provisional
Probab=57.70 E-value=25 Score=36.31 Aligned_cols=72 Identities=13% Similarity=0.156 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCcee-----E-ecCCccchhHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS-----Y-NLGGMGCSAGVIAVDL 256 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~-----~-dl~gmGCsggl~aL~l 256 (390)
+.+.+...+.++++|+++|++++|||+.|+.-. .+.+-..+.++||++++-.. + +.++|+.++-+.+|+-
T Consensus 277 ~~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqg----g~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~ 352 (401)
T PLN03170 277 GLISKNIERSLEEAFKPLGITDYNSIFWVAHPG----GPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDE 352 (401)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccccCeEEecCC----cHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHH
Confidence 345566667888999999999999999765422 34566678899999865321 2 2345666666667766
Q ss_pred HH
Q 016389 257 AK 258 (390)
Q Consensus 257 A~ 258 (390)
..
T Consensus 353 ~~ 354 (401)
T PLN03170 353 MR 354 (401)
T ss_pred HH
Confidence 53
No 239
>PLN03171 chalcone synthase-like protein; Provisional
Probab=57.65 E-value=37 Score=34.98 Aligned_cols=87 Identities=9% Similarity=0.103 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHc---------CCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCcee-----E-ecCCccc
Q 016389 183 EEAEQVMYGALDNLFSN---------TNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS-----Y-NLGGMGC 247 (390)
Q Consensus 183 eea~~la~~Aa~~aL~k---------agi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~-----~-dl~gmGC 247 (390)
+..+.++.+++++++++ .|++++||+.++ ++..+.+-..+.++||++++-.. + +.++|++
T Consensus 275 ~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~~-----Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtss 349 (399)
T PLN03171 275 RQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAV-----HPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFG 349 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEEE-----cCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchh
Confidence 55666776666776665 588899998764 22334667788999999865321 2 3345666
Q ss_pred hhHHHHHHHHHHHHh--cCCC---CeEEEEEe
Q 016389 248 SAGVIAVDLAKDLLQ--VNWN---TYAVVVST 274 (390)
Q Consensus 248 sggl~aL~lA~~lL~--a~~~---~~aLVVst 274 (390)
++-..+|+-+..-.+ ..++ .++|+++.
T Consensus 350 aSip~~L~~~~~~~~~~~~~G~~~d~vll~~f 381 (399)
T PLN03171 350 ATVIFALDELRRQMEEAAAAGAWPELGVMMAF 381 (399)
T ss_pred hhHHHHHHHHHhhHhhcCCCCCCcceEEEEEE
Confidence 667777775543221 1222 56776653
No 240
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=57.48 E-value=16 Score=37.62 Aligned_cols=44 Identities=16% Similarity=0.185 Sum_probs=32.1
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEE-eecCCCCCCCHHHHHHHHcC
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYR 232 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv-~~s~~~~~Psla~~I~~~Lg 232 (390)
..++++++|+++|++|+|||.+.. .|++..--+.=..-|.+-||
T Consensus 277 ~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg 321 (405)
T PRK09116 277 MQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhC
Confidence 358899999999999999999984 45554333444555666666
No 241
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=55.61 E-value=18 Score=37.08 Aligned_cols=45 Identities=13% Similarity=0.039 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEe-ecCCCCCCCHHHHHHHHcC
Q 016389 188 VMYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYR 232 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dId~LIv~-~s~~~~~Psla~~I~~~Lg 232 (390)
-..+|++++|+++|++|+|||.+-.. |.+-.--+.=...+.+.+|
T Consensus 289 ~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 289 GARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 35688999999999999999998744 4433222333445566666
No 242
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=55.10 E-value=22 Score=36.74 Aligned_cols=44 Identities=14% Similarity=0.024 Sum_probs=30.8
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEe-ecCCCCCCCHHHHHHHHcC
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYR 232 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~-~s~~~~~Psla~~I~~~Lg 232 (390)
...|++++|+++|++|+|||.+-.+ |.+..--+.=..-|.+-||
T Consensus 280 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg 324 (414)
T PRK08722 280 GALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALG 324 (414)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhc
Confidence 4678899999999999999998744 4443333444445556665
No 243
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=54.77 E-value=13 Score=34.44 Aligned_cols=37 Identities=11% Similarity=0.262 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCC
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPT 220 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~ 220 (390)
.-.+.....++++|+++|++++|||.++++..++..|
T Consensus 32 ~h~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfT 68 (202)
T TIGR03725 32 NHSEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFT 68 (202)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHH
Confidence 3456667799999999999999999999998876543
No 244
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=53.28 E-value=23 Score=36.67 Aligned_cols=45 Identities=13% Similarity=0.012 Sum_probs=32.3
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEe-ecCCCCCCCHHHHHHHHcCC
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRL 233 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~-~s~~~~~Psla~~I~~~LgL 233 (390)
..++++++|+++|++|+|||.+-.. |++..--|.=...|.+-||-
T Consensus 288 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 288 AGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 5678999999999999999999744 44433334445556666763
No 245
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=52.87 E-value=15 Score=36.68 Aligned_cols=37 Identities=16% Similarity=0.103 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCC
Q 016389 181 AREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFN 218 (390)
Q Consensus 181 ~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~ 218 (390)
.+++++.+.. .++++|+++|++++|||.+.+++.++.
T Consensus 42 ~~~H~~~l~~-~i~~~l~~~~~~~~did~Iavt~gPg~ 78 (322)
T TIGR03722 42 AEHHAEVAPK-LIKEALEEAGVSLEDIDAVAFSQGPGL 78 (322)
T ss_pred HHHHHHHHHH-HHHHHHHHcCCCHHHCCEEEEecCCch
Confidence 3455555544 499999999999999999999987653
No 246
>PLN03173 chalcone synthase; Provisional
Probab=52.21 E-value=59 Score=33.43 Aligned_cols=72 Identities=11% Similarity=0.149 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCcee-----Ee-cCCccchhHHHHHHH
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS-----YN-LGGMGCSAGVIAVDL 256 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~-----~d-l~gmGCsggl~aL~l 256 (390)
+.+..-.-+.++++|++.|++++|||+.|+. +..+..-..+.++||++++-.. +. .++|+-++-+.+|+-
T Consensus 273 ~~~~~~~~~~i~~~L~~~gl~~~di~~~v~H----qgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~ 348 (391)
T PLN03173 273 GLISKNVEKSLTEAFKPLGISDWNSLFWIAH----PGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDE 348 (391)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccccCeEEEC----CCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHH
Confidence 3456666778889999999999999997664 2334566678999999865322 22 233444444455554
Q ss_pred HH
Q 016389 257 AK 258 (390)
Q Consensus 257 A~ 258 (390)
+.
T Consensus 349 ~~ 350 (391)
T PLN03173 349 MR 350 (391)
T ss_pred HH
Confidence 43
No 247
>PRK08304 stage V sporulation protein AD; Validated
Probab=51.77 E-value=57 Score=33.05 Aligned_cols=91 Identities=20% Similarity=0.232 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCC-------CCceeEec---------CCccchhHH
Q 016389 188 VMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR-------GNIRSYNL---------GGMGCSAGV 251 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr-------~~v~~~dl---------~gmGCsggl 251 (390)
-|+..+.+=|+++|.+|+|-|++|+.-=. ..--.+...+..+-|+. -.+.-||. +|-|||+-+
T Consensus 209 Aa~dti~~h~~d~~~~~~~yDli~tGDlg-~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v 287 (337)
T PRK08304 209 AAADTIQQHFKDTGRSPEDYDLIVTGDLG-RVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVV 287 (337)
T ss_pred HHHHHHHHHHHHcCCChhhccEEEEcchH-HHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHH
Confidence 35566677789999999999999876311 11112233333333331 12344541 345778777
Q ss_pred HHHHHHHHHHhcCCCCeEEEEEecc-CCcC
Q 016389 252 IAVDLAKDLLQVNWNTYAVVVSTEN-ITQN 280 (390)
Q Consensus 252 ~aL~lA~~lL~a~~~~~aLVVstE~-~S~~ 280 (390)
..=.+-+.+ +.+..+|+|+|+|-. +|+.
T Consensus 288 ~~~~~~~~~-~~g~~~rvl~v~tGaLls~~ 316 (337)
T PRK08304 288 TYGYLLKEL-QKGKLKRVLVVATGALLSPT 316 (337)
T ss_pred HHHHHHHHH-hcCCceEEEEEEchhhcCcc
Confidence 766665544 455679999999864 4543
No 248
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=51.36 E-value=31 Score=26.60 Aligned_cols=36 Identities=17% Similarity=0.083 Sum_probs=25.6
Q ss_pred CccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCC
Q 016389 125 LKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLG 160 (390)
Q Consensus 125 ~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~ 160 (390)
+.|+-..+...+.....-+++++.++.+++++.||.
T Consensus 11 ~~V~g~~ier~~~~~~~~~~e~~~~f~~~L~~~Gv~ 46 (69)
T TIGR03595 11 FVVSGKKIERWVAKTPFNNDENLRRFARKLKKLGVE 46 (69)
T ss_pred EEEechHHHHHHHHcCCCCHHHHHHHHHHHHHCCHH
Confidence 445656666666666555677888888899898874
No 249
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=50.99 E-value=20 Score=27.68 Aligned_cols=36 Identities=22% Similarity=0.163 Sum_probs=26.4
Q ss_pred CccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCC
Q 016389 125 LKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLG 160 (390)
Q Consensus 125 ~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~ 160 (390)
++|.-..+...+......++++++.+.+++++.||.
T Consensus 11 ~~V~g~~ie~~~~~~~~~~~e~~~rf~~~L~~~Gv~ 46 (69)
T PF09269_consen 11 FVVEGPKIERLVAMTNFDDEESLRRFQRKLKKMGVE 46 (69)
T ss_dssp EEEE-HHHHHHHTTEEE-TGGGHHHHHHHHHHTTHH
T ss_pred EEEEChHHHHHHHhcCCCCHHHHHHHHHHHHHCCHH
Confidence 457777777777776655778888888899888874
No 250
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=48.17 E-value=23 Score=35.41 Aligned_cols=87 Identities=18% Similarity=0.239 Sum_probs=46.4
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeec--CCCCCCCHHHHHHHHcCCCCCc-------eeEe-------c--CCccchhH
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCS--LFNPTPSLSAMIVNKYRLRGNI-------RSYN-------L--GGMGCSAG 250 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s--~~~~~Psla~~I~~~LgLr~~v-------~~~d-------l--~gmGCsgg 250 (390)
|+..+.+=|+++|.+|+|-|+||+.-= .+. .+...+.++-|+.-.- .-|| - +|-|||+.
T Consensus 205 A~dTI~~h~~D~g~~p~dYDlIvTGDLg~vG~---~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGGSGcgCSA~ 281 (329)
T PF07451_consen 205 AADTIEQHFKDTGRSPDDYDLIVTGDLGKVGR---KILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGGSGCGCSAV 281 (329)
T ss_dssp HHHHHHHHHHHCT--GGG-SEEEESS-HHHHH---HHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-EESHHHHHH
T ss_pred HHHHHHHHHHHhCCChhhcCeEEecchHHHHH---HHHHHHHHHcCCCCccccccCCeEeecCCccccccCCCCcchHHH
Confidence 455566778999999999999987631 111 2333444454443111 1122 2 24567777
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEEecc-CCc
Q 016389 251 VIAVDLAKDLLQVNWNTYAVVVSTEN-ITQ 279 (390)
Q Consensus 251 l~aL~lA~~lL~a~~~~~aLVVstE~-~S~ 279 (390)
+..=.+-+.| +.+..+|+|+|+|-. +|+
T Consensus 282 V~~g~ll~~l-~~g~~krvL~vaTGALlSp 310 (329)
T PF07451_consen 282 VLCGYLLPKL-RKGELKRVLFVATGALLSP 310 (329)
T ss_dssp HHHHCHHHHH-HTTS-SEEEEEEEEE---H
T ss_pred HHHHHHHHHH-HcCCceEEEEEEchhhcCc
Confidence 7666665554 456679999998864 454
No 251
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=48.08 E-value=33 Score=35.61 Aligned_cols=26 Identities=8% Similarity=0.198 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEe
Q 016389 188 VMYGALDNLFSNTNVNPKDIGILVVN 213 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dId~LIv~ 213 (390)
-...|++++|+++|++|+|||.+-..
T Consensus 300 ~~~~a~~~Al~~Agi~~~dId~ve~h 325 (437)
T PLN02836 300 GAVLAMTRALQQSGLHPNQVDYVNAH 325 (437)
T ss_pred HHHHHHHHHHHHcCCCHhHcCEEEcc
Confidence 34678999999999999999998744
No 252
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=47.95 E-value=13 Score=36.00 Aligned_cols=62 Identities=16% Similarity=0.152 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCC-HHHHHHHHcCCCCCceeEecCC
Q 016389 182 REEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPS-LSAMIVNKYRLRGNIRSYNLGG 244 (390)
Q Consensus 182 ~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Ps-la~~I~~~LgLr~~v~~~dl~g 244 (390)
+++++ .....++++|+++|++++|||.+.++..++..++= ....+++-|...-+++-+.++.
T Consensus 27 r~H~~-~L~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~~~Pli~v~~ 89 (268)
T PF00814_consen 27 RQHSE-NLPPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALALNIPLIGVSH 89 (268)
T ss_dssp HHHHH-HHHHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHTT--EEEEEH
T ss_pred HHHHH-HHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHhCCCeEeecc
Confidence 44444 44588999999999999999999999987654321 2222334443333444455543
No 253
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=46.43 E-value=48 Score=32.99 Aligned_cols=62 Identities=10% Similarity=0.064 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCH--HHHHHHHcCCCCCceeEecCCccc
Q 016389 185 AEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSL--SAMIVNKYRLRGNIRSYNLGGMGC 247 (390)
Q Consensus 185 a~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psl--a~~I~~~LgLr~~v~~~dl~gmGC 247 (390)
-.+.....++++|+++|++++|||.+.++..++. .+++ ..-+++-|...-+++-+.++.+-|
T Consensus 49 H~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGs-ftglrig~~~Ak~la~~~~~p~~~v~h~~a 112 (314)
T TIGR03723 49 HLEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGL-IGALLVGVSFAKALALALNKPLIGVNHLEG 112 (314)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCh-HHhHHHHHHHHHHHHHHhCCCEEecccHHH
Confidence 3556678899999999999999999999998775 3342 223334443333455566665433
No 254
>PLN03172 chalcone synthase family protein; Provisional
Probab=45.62 E-value=52 Score=33.87 Aligned_cols=71 Identities=13% Similarity=0.166 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCcee-----E-ecCCccchhHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS-----Y-NLGGMGCSAGVIAVDLA 257 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~-----~-dl~gmGCsggl~aL~lA 257 (390)
.+..-..+.++++|++.|++..|||+.++. +..+..-..|.++||++++-.. + +-++|+.++-+.+|+-.
T Consensus 274 ~~~~~i~~~~~~~L~~~gl~~~di~~~~~H----qgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (393)
T PLN03172 274 LISKNIEKSLVEAFAPIGINDWNSIFWIAH----PGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEM 349 (393)
T ss_pred HHHHHHHHHHHHHhhhcCCCccccceEEec----CCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 455556667788999999999999997654 2234566778999999865332 1 23456666666777654
Q ss_pred H
Q 016389 258 K 258 (390)
Q Consensus 258 ~ 258 (390)
.
T Consensus 350 ~ 350 (393)
T PLN03172 350 R 350 (393)
T ss_pred H
Confidence 3
No 255
>CHL00094 dnaK heat shock protein 70
Probab=43.28 E-value=47 Score=36.22 Aligned_cols=47 Identities=11% Similarity=0.204 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCC
Q 016389 187 QVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 234 (390)
Q Consensus 187 ~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr 234 (390)
+-....++++|+++|++++|||.++.+... .-.|.+..+|.+.+|..
T Consensus 309 ~~~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~ 355 (621)
T CHL00094 309 NRCRIPVENALKDAKLDKSDIDEVVLVGGS-TRIPAIQELVKKLLGKK 355 (621)
T ss_pred HHHHHHHHHHHHHcCCChhhCcEEEEECCc-cCChHHHHHHHHHhCCC
Confidence 334556789999999999999999977543 34899999999999854
No 256
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=43.18 E-value=53 Score=33.41 Aligned_cols=86 Identities=15% Similarity=0.159 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCH--HHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhc
Q 016389 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSL--SAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQV 263 (390)
Q Consensus 186 ~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psl--a~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a 263 (390)
.+.....++++|+++|++++|||.+.|+..++. .|++ ....++-|...-+++-+.++. +-|=+.+-.+.... .
T Consensus 50 ~~~l~~~i~~~l~~a~~~~~did~Iavt~GPGl-~~~LrVG~~~Ak~LA~a~~~PligV~H--legHi~a~~l~~~~--~ 124 (345)
T PTZ00340 50 REHILSLVKEALEEAKITPSDISLICYTKGPGM-GAPLSVGAVVARTLSLLWGKPLVGVNH--CVAHIEMGRLVTGA--E 124 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCc-HhhHHHHHHHHHHHHHHcCCCEeecch--HHHHHHHHhhccCC--C
Confidence 334557789999999999999999998887763 3443 223345554444556666665 33333333332110 1
Q ss_pred CCCCeEEEEEeccCC
Q 016389 264 NWNTYAVVVSTENIT 278 (390)
Q Consensus 264 ~~~~~aLVVstE~~S 278 (390)
.| -+|+||+-.+.
T Consensus 125 ~P--l~LlVSGGhT~ 137 (345)
T PTZ00340 125 NP--VVLYVSGGNTQ 137 (345)
T ss_pred CC--eEEEEeCCceE
Confidence 23 78888765443
No 257
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=42.52 E-value=75 Score=32.10 Aligned_cols=91 Identities=15% Similarity=0.198 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCC-------CCceeEe------c--CCccchhHHH
Q 016389 188 VMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR-------GNIRSYN------L--GGMGCSAGVI 252 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr-------~~v~~~d------l--~gmGCsggl~ 252 (390)
-|+..+.+=|+++|.+|+|-|++|+.-= +..--.+...+..+-|+. -.+.-|| - +|-|||+-+.
T Consensus 203 aa~dti~~h~~d~~~~~~~yd~i~tgdl-g~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v~ 281 (327)
T TIGR02845 203 AAADTIEAHFKDTGRSVDDYDLIVTGDL-ARVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAVVT 281 (327)
T ss_pred HHHHHHHHHHHHcCCChhhccEEEecch-HHHHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHHHH
Confidence 3556667778999999999999987631 110112233333333331 1123332 2 3456777776
Q ss_pred HHHHHHHHHhcCCCCeEEEEEecc-CCcC
Q 016389 253 AVDLAKDLLQVNWNTYAVVVSTEN-ITQN 280 (390)
Q Consensus 253 aL~lA~~lL~a~~~~~aLVVstE~-~S~~ 280 (390)
.=.+-+.| +.+.-+|+|+|.|-. +|+.
T Consensus 282 ~~~~~~~~-~~g~~~r~l~v~tgalls~~ 309 (327)
T TIGR02845 282 YGHILKEM-LRGKLKKVLVVATGALLSPT 309 (327)
T ss_pred HHHHHHHH-hcCcceEEEEEEchhhcCcc
Confidence 66655544 445679999999864 5543
No 258
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=42.32 E-value=23 Score=34.88 Aligned_cols=30 Identities=17% Similarity=0.375 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEe
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVN 213 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~ 213 (390)
..-||...|++++++++|+.|.||+.+=..
T Consensus 269 ~gfdm~~~aa~~l~aksgltpndvqvielh 298 (408)
T KOG1406|consen 269 AGFDMTRLAAKRLFAKSGLTPNDVQVIELH 298 (408)
T ss_pred hcchHHHHHHHHHHHHcCCCcccceEEEee
Confidence 356889999999999999999999988744
No 259
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=40.47 E-value=73 Score=32.62 Aligned_cols=48 Identities=15% Similarity=0.205 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCC-----CHHHHHHHHcCC
Q 016389 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTP-----SLSAMIVNKYRL 233 (390)
Q Consensus 186 ~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~P-----sla~~I~~~LgL 233 (390)
.+-.-..++++|+++|.+|+|+|.+-|...++.+.+ +.|-.++.++..
T Consensus 83 r~ni~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~k 135 (405)
T KOG2707|consen 83 RENIPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQK 135 (405)
T ss_pred HHHHHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccC
Confidence 445567889999999999999999998877665433 234444444443
No 260
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=39.50 E-value=1.2e+02 Score=28.97 Aligned_cols=101 Identities=18% Similarity=0.311 Sum_probs=63.3
Q ss_pred CcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCC
Q 016389 143 DESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPS 222 (390)
Q Consensus 143 ~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Ps 222 (390)
++++...++.+.++.|+.+++..-.. ...|+= .++...+++..+....+++++++- .-|.+|..|.... +
T Consensus 118 t~rs~~il~~lv~~~g~s~~~~~vrs-tdl~vL-~l~~~~~~~~~~l~~~~~~a~~ed-----gAeaIiLGCAGms---~ 187 (230)
T COG4126 118 TERSRPILEELVRSYGLSRHCRSVRS-TDLPVL-ALEGPPEEAEALLVIEAAEALKED-----GAEAIILGCAGMS---D 187 (230)
T ss_pred CcccHHHHHHHHHhcCccccccceee-CCCCcc-cccCChHHHHHHHHHHHHHHhhhc-----CCCEEEEcCccHH---H
Confidence 35566666777888888887753111 011110 001123778888888888888764 4678888887654 6
Q ss_pred HHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcC
Q 016389 223 LSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN 264 (390)
Q Consensus 223 la~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~ 264 (390)
++..++..+|.+ | +| | -..++.+|-.+++.+
T Consensus 188 la~~Lq~~~gvP--V--ID--g-----v~Aav~~a~~L~~~~ 218 (230)
T COG4126 188 LADQLQKAFGVP--V--ID--G-----VAAAVKLAEGLLGMG 218 (230)
T ss_pred HHHHHHHHhCCC--c--cc--c-----hHHHHHHHHHHHhhc
Confidence 789999999954 2 33 2 345566777777654
No 261
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=39.34 E-value=84 Score=27.03 Aligned_cols=52 Identities=10% Similarity=0.159 Sum_probs=37.1
Q ss_pred HHHHHHHHcCCCCCCCcCEEEEeecCC--CCCCCHHHHHHHHc-CCCCCceeEecCCcc
Q 016389 191 GALDNLFSNTNVNPKDIGILVVNCSLF--NPTPSLSAMIVNKY-RLRGNIRSYNLGGMG 246 (390)
Q Consensus 191 ~Aa~~aL~kagi~p~dId~LIv~~s~~--~~~Psla~~I~~~L-gLr~~v~~~dl~gmG 246 (390)
+-.++.+++-+++++||--+++..+.+ ...|..+ ++++ |+. +|.-++...|.
T Consensus 24 eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FPA~a---aR~~~Gw~-~Vplmc~qEm~ 78 (117)
T TIGR01796 24 ELLTELMERNELTPEDLISVIFTVTEDLHADFPAAA---ARGLPGWT-DVPVMCAQEIP 78 (117)
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEecCcccccChHHH---HHhccCCC-CcceeccCcCC
Confidence 345667788999999999999887654 4456544 4667 886 78777766653
No 262
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=38.12 E-value=1.7e+02 Score=29.97 Aligned_cols=24 Identities=13% Similarity=0.051 Sum_probs=20.9
Q ss_pred HHHHHHHHHcCCCCC--CCcCEEEEe
Q 016389 190 YGALDNLFSNTNVNP--KDIGILVVN 213 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p--~dId~LIv~ 213 (390)
..|++++++++|+++ +|||.+=+.
T Consensus 265 ~~a~~~a~~~aGi~~p~~diD~~ei~ 290 (392)
T PRK06065 265 EFAARMAYKMAGIERPRKEIDVAEPY 290 (392)
T ss_pred HHHHHHHHHHcCCCCchhhCcEEEec
Confidence 479999999999985 999999755
No 263
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=36.79 E-value=99 Score=31.70 Aligned_cols=85 Identities=14% Similarity=0.213 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCC--------CHHHHHHHHcCCC--CCceeEecCCccchh
Q 016389 180 AAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTP--------SLSAMIVNKYRLR--GNIRSYNLGGMGCSA 249 (390)
Q Consensus 180 ~~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~P--------sla~~I~~~LgLr--~~v~~~dl~gmGCsg 249 (390)
+...+-..+-.+|++++++++|+++++||.|=..-.|-+..| +-.+.|+++.|.+ .|-++-|+.--|=.|
T Consensus 64 ~l~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~VV~DFR~~D~a~GGqGA 143 (365)
T PRK09585 64 ELDTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGITVVADFRRRDVAAGGQGA 143 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcCEEecChHHHHhcCCCCC
Confidence 344566778889999999999999999999887765533334 2567889999986 333445553223233
Q ss_pred HHHHHHHHHHHHhcCCC
Q 016389 250 GVIAVDLAKDLLQVNWN 266 (390)
Q Consensus 250 gl~aL~lA~~lL~a~~~ 266 (390)
=+..+ ...+|-.++.
T Consensus 144 PLvp~--~~~~Lf~~~~ 158 (365)
T PRK09585 144 PLVPA--FHQALFGHPD 158 (365)
T ss_pred CchHH--HHHHHhcCCC
Confidence 34333 3445555554
No 264
>PF08745 UPF0278: UPF0278 family; InterPro: IPR022785 This entry contains proteins of the UPF0278 family and proteins containing PIN domains. Members of the UPF0278 family are uncharacterised and about 200 amino acids in length.; PDB: 2LCQ_A.
Probab=36.52 E-value=12 Score=35.20 Aligned_cols=78 Identities=17% Similarity=0.239 Sum_probs=0.0
Q ss_pred EEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceeeecCCCcCCC---CCcchHHHHHHHHHHHH
Q 016389 114 VDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIP---PKPSMAAAREEAEQVMY 190 (390)
Q Consensus 114 ~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~p---p~~~~~~~~eea~~la~ 190 (390)
.+++||.|| --.+|+..++...+...+-..++..|+..++==.-+-..|...++.= -..|.+ ....+|.
T Consensus 41 l~is~YmPp----SVy~El~~fl~~~~~~~e~~~k~~twvv~KsP~ryev~IPA~i~yEyI~emR~RIn----KGLRVAE 112 (205)
T PF08745_consen 41 LGISCYMPP----SVYKELKNFLERNGCDEEVISKLDTWVVKKSPDRYEVKIPAEIFYEYIEEMRERIN----KGLRVAE 112 (205)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccc----cccccccccccccccccccccccccccccccccccccccccccccccccccccccc----ccccccc
Confidence 468999997 23457777776554322333445567766654333333455444321 133333 3344445
Q ss_pred HHHHHHHHc
Q 016389 191 GALDNLFSN 199 (390)
Q Consensus 191 ~Aa~~aL~k 199 (390)
+|++++-..
T Consensus 113 eavrea~~~ 121 (205)
T PF08745_consen 113 EAVREAAQE 121 (205)
T ss_dssp ---------
T ss_pred ccccccccc
Confidence 555544433
No 265
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=36.08 E-value=27 Score=35.76 Aligned_cols=31 Identities=16% Similarity=0.145 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEE-EeecCCC
Q 016389 188 VMYGALDNLFSNTNVNPKDIGILV-VNCSLFN 218 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dId~LI-v~~s~~~ 218 (390)
-+..|.+.+|+++|+.|+|||.+= ++|||..
T Consensus 302 Ga~~am~raL~~Agl~pe~i~YvNAHATST~~ 333 (440)
T KOG1394|consen 302 GAVLAMERALKDAGLSPEDIDYVNAHATSTPL 333 (440)
T ss_pred hHHHHHHHHHHHcCCChhhcCeeecccccCcC
Confidence 466789999999999999999997 6677643
No 266
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=35.49 E-value=1.1e+02 Score=26.48 Aligned_cols=54 Identities=11% Similarity=0.209 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCcCEEEEeecCC--CCCCCHHHHHHHHc-CCCCCceeEecCC
Q 016389 187 QVMYGALDNLFSNTNVNPKDIGILVVNCSLF--NPTPSLSAMIVNKY-RLRGNIRSYNLGG 244 (390)
Q Consensus 187 ~la~~Aa~~aL~kagi~p~dId~LIv~~s~~--~~~Psla~~I~~~L-gLr~~v~~~dl~g 244 (390)
+-..+-.++.+++-+++|+||--+++.++.+ ...|..++ +++ |+. ++.-+....
T Consensus 20 ~at~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~a~---R~~~g~~-~Vpl~c~~E 76 (118)
T PF07736_consen 20 EATRELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAAAA---RELPGWD-DVPLMCAQE 76 (118)
T ss_dssp HHHHHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCHHH---HHTTTGT-TSEEEEEE-
T ss_pred HHHHHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHHHH---HccCCCC-ccceeccCc
Confidence 3334445677788999999999999887754 56777665 566 775 677665544
No 267
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=35.32 E-value=65 Score=33.06 Aligned_cols=24 Identities=13% Similarity=0.295 Sum_probs=21.2
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEe
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVN 213 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~ 213 (390)
.++++++|+++|++|+|||.+-..
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~h 307 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPH 307 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEcc
Confidence 588999999999999999988744
No 268
>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type. This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.
Probab=34.67 E-value=4e+02 Score=26.16 Aligned_cols=49 Identities=18% Similarity=0.293 Sum_probs=32.8
Q ss_pred HHHHHHcCCCCeEEEEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCcee
Q 016389 100 LTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEET 163 (390)
Q Consensus 100 ~~~~~~~r~~~VyI~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~ 163 (390)
.+-|++.+|+ ..++-..|.|.++....-=.|.+..+++.+++.|++.--
T Consensus 10 ~t~~l~~~p~---------------~~~~l~~f~~~~~~aks~ised~~i~~~~~~~~~~g~~~ 58 (268)
T TIGR01743 10 LTNYLITNPN---------------KLIPLNFFSERYESAKSSISEDIVIIKETFEKFGIGKLL 58 (268)
T ss_pred HHHHHHhCCC---------------ceEcHHHHHHHhccccchhhhhHHHHHHHHHhcCCceEE
Confidence 3567777776 346777788877654322234577778899999988743
No 269
>PF06924 DUF1281: Protein of unknown function (DUF1281); InterPro: IPR009694 This family consists of several hypothetical enterobacterial proteins of around 170 residues in length. Members of this family are found in Escherichia coli, Salmonella typhimurium and Shigella species. The function of this family is unknown.; PDB: 2IJR_A.
Probab=33.19 E-value=33 Score=30.12 Aligned_cols=37 Identities=11% Similarity=0.258 Sum_probs=25.6
Q ss_pred CHHHHHHHHhhcCCCCcchHHHHHHHHHHcCCCceee
Q 016389 128 SYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETY 164 (390)
Q Consensus 128 s~~~~~e~~~~~~~~~~~~~~~~~rI~~rsGI~~R~~ 164 (390)
-.++.++.+.....+|++..+.+.++...|||+.+++
T Consensus 72 AF~~Wl~lL~~~~~Ld~~~~~~i~~l~~QSGi~~~~W 108 (134)
T PF06924_consen 72 AFTQWLGLLQKDVWLDPETCRRIHRLWLQSGIGARRW 108 (134)
T ss_dssp HHHHHHHHHHTT-B-SSHHHHHHHHHHHTT-GGG--T
T ss_pred cHHHHHHHHHhCCcCCHHHHHHHHHHHHHcCcccccc
Confidence 3455556666666788999999999999999999987
No 270
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=32.83 E-value=55 Score=32.21 Aligned_cols=49 Identities=22% Similarity=0.359 Sum_probs=36.2
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG 244 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g 244 (390)
+.|++.+|+++|.+.+|||++=+|-. ..|- .--+++.|+++ +.-.|++|
T Consensus 296 vPAI~~vLKksGlkl~DiDl~EvNEA---FApQ-~LAv~r~L~ld--~sKlNVNG 344 (396)
T KOG1391|consen 296 VPAISGVLKKSGLKLKDIDLVEVNEA---FAPQ-YLAVERSLDLD--ISKLNVNG 344 (396)
T ss_pred cHHHHHHHHHcCCcccccceEEechh---hchH-HHHHHHhhCCC--hhhccccC
Confidence 46899999999999999999988843 1222 23467888885 55577765
No 271
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=31.27 E-value=1.2e+02 Score=33.20 Aligned_cols=48 Identities=8% Similarity=0.056 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCC
Q 016389 186 EQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 234 (390)
Q Consensus 186 ~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr 234 (390)
.+=..+.++++|+++|++++|||.++.+...- -.|.+..+|.+.+|..
T Consensus 308 ~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGss-riP~v~~~l~~~fg~~ 355 (616)
T PRK05183 308 VKRTLLACRRALRDAGVEADEVKEVVMVGGST-RVPLVREAVGEFFGRT 355 (616)
T ss_pred HHHHHHHHHHHHHHcCCCcccCCEEEEECCcc-cChHHHHHHHHHhccC
Confidence 33345567899999999999999999775332 3789999999999865
No 272
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=31.13 E-value=1.1e+02 Score=33.20 Aligned_cols=51 Identities=8% Similarity=0.079 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCC
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 234 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr 234 (390)
+.-.+=..+.++++|+++|++++|||.++.+...- ..|.+..+|.+.+|..
T Consensus 289 ~~ll~~i~~~i~~~L~~a~~~~~~id~ViLvGGss-riP~V~~~l~~~f~~~ 339 (599)
T TIGR01991 289 QPLVQKTLSICRRALRDAGLSVEEIKGVVLVGGST-RMPLVRRAVAELFGQE 339 (599)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhCCEEEEECCcC-CChHHHHHHHHHhCCC
Confidence 33334455677899999999999999999664332 4799999999999864
No 273
>PLN02854 3-ketoacyl-CoA synthase
Probab=31.09 E-value=1.7e+02 Score=31.58 Aligned_cols=42 Identities=7% Similarity=0.155 Sum_probs=31.8
Q ss_pred HHHHHHHHHHcCCCCC------CCcCEEEEeecCCCCCCCHHHHHHHHcCCC
Q 016389 189 MYGALDNLFSNTNVNP------KDIGILVVNCSLFNPTPSLSAMIVNKYRLR 234 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p------~dId~LIv~~s~~~~~Psla~~I~~~LgLr 234 (390)
+...+++.|+++|+++ +|||+.+..-. ....-..++++||++
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqg----gr~IId~v~k~LgL~ 434 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAG----GRAVLDELQKNLQLS 434 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEECCC----CHHHHHHHHHHcCCC
Confidence 5677889999999997 68998876532 234555788999996
No 274
>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed
Probab=31.01 E-value=1.2e+02 Score=29.91 Aligned_cols=21 Identities=14% Similarity=0.455 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCc
Q 016389 187 QVMYGALDNLFSNTNVNPKDI 207 (390)
Q Consensus 187 ~la~~Aa~~aL~kagi~p~dI 207 (390)
.....++++++++.|++|+|.
T Consensus 26 ~~il~~l~~al~~l~~~p~d~ 46 (286)
T PRK11867 26 GSILAALQRALAELGLDPENV 46 (286)
T ss_pred HHHHHHHHHHHHHhCCCCCcE
Confidence 347889999999999999875
No 275
>PRK13410 molecular chaperone DnaK; Provisional
Probab=30.55 E-value=1.6e+02 Score=32.51 Aligned_cols=51 Identities=10% Similarity=0.182 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCC
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 234 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr 234 (390)
+.-.+-..+.++++|+++|++++|||.||.+.... -.|.+..+|.+.+|..
T Consensus 305 ~~l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGss-RiP~V~~~l~~~fg~~ 355 (668)
T PRK13410 305 GDLLDRLLRPVKRALKDAGLSPEDIDEVVLVGGST-RMPMVQQLVRTLIPRE 355 (668)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcc-ccHHHHHHHHHHcCCC
Confidence 33444455668899999999999999998775433 3899999999999854
No 276
>COG1908 FrhD Coenzyme F420-reducing hydrogenase, delta subunit [Energy production and conversion]
Probab=28.51 E-value=1.1e+02 Score=26.57 Aligned_cols=70 Identities=16% Similarity=0.117 Sum_probs=47.6
Q ss_pred EEeecCCCCCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEeccCCcCcccCC
Q 016389 211 VVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGN 285 (390)
Q Consensus 211 Iv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~~S~~~~~~~ 285 (390)
|.-||..+..|..+--=.++.+-+++++-+-+ | |||-+..--+++.+.+. ..-|+|+++-.---|+..||
T Consensus 4 i~F~C~wcsygaaDlag~~rmqyp~~vRiIrv--~-CsGrvn~~fvl~Al~~G--aDGV~v~GC~~geCHy~~GN 73 (132)
T COG1908 4 IAFACNWCSYGAADLAGTSRMQYPPNVRIIRV--M-CSGRVNPEFVLKALRKG--ADGVLVAGCKIGECHYISGN 73 (132)
T ss_pred EEEEcccccccchhhhccccccCCCceEEEEe--e-ccCccCHHHHHHHHHcC--CCeEEEecccccceeeeccc
Confidence 43344444445544433456677788887765 4 99999999998888764 45789988766556777776
No 277
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=28.31 E-value=1.9e+02 Score=24.95 Aligned_cols=53 Identities=13% Similarity=0.157 Sum_probs=36.5
Q ss_pred HHHHHHHHcCCCCCCCcCEEEEeecCC--CCCCCHHHHHHHHcCCCCCceeEecCCcc
Q 016389 191 GALDNLFSNTNVNPKDIGILVVNCSLF--NPTPSLSAMIVNKYRLRGNIRSYNLGGMG 246 (390)
Q Consensus 191 ~Aa~~aL~kagi~p~dId~LIv~~s~~--~~~Psla~~I~~~LgLr~~v~~~dl~gmG 246 (390)
+-.++.+++-+++++||--+++..+.+ ...|.. .++++|.-.+|.-++...|.
T Consensus 24 eLl~~i~~~N~l~~edivSv~FT~T~DL~a~FPA~---aaR~~~~~~~Vplmc~qE~~ 78 (117)
T cd02185 24 ELLEEIIERNNIKPEDIISVIFTVTPDLDAAFPAK---AARELGGWKYVPLMCAQEMD 78 (117)
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEeCCcccccChHH---HHHhcCCCCCcceeecCcCC
Confidence 345667788999999999999887654 445654 45677444477777766553
No 278
>PLN03168 chalcone synthase; Provisional
Probab=27.86 E-value=2.3e+02 Score=29.10 Aligned_cols=70 Identities=11% Similarity=0.081 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeE------ecCCccchhHHHHHHHH
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSY------NLGGMGCSAGVIAVDLA 257 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~------dl~gmGCsggl~aL~lA 257 (390)
....-....++++|++.|....|++..|+ ++..+..-..++++||++++-... +.++|+.++-+.+|+-+
T Consensus 273 ~i~~~~~~~l~~~l~~~~~~~~d~~~~v~----Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~ 348 (389)
T PLN03168 273 LISKNIEKFLNEARKCVGSPDWNEMFWAV----HPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQI 348 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccceEEe----cCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHH
Confidence 34444455666677777887777776553 333456777789999998654322 23445555666666554
No 279
>COG1458 Predicted DNA-binding protein containing PIN domain [General function prediction only]
Probab=27.66 E-value=23 Score=33.23 Aligned_cols=39 Identities=26% Similarity=0.513 Sum_probs=21.8
Q ss_pred EEEeEEeCCCCCccCHHHHHHHHhhcCCCCcchHHHHHHHHHH
Q 016389 114 VDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILER 156 (390)
Q Consensus 114 ~~~g~~~P~~~~~vs~~~~~e~~~~~~~~~~~~~~~~~rI~~r 156 (390)
.+++||.|| ---.++..++.+.|.-.+-..++..|+..+
T Consensus 45 ~~iscyiPP----sVY~El~~fm~r~gc~~e~~~ki~twivkK 83 (221)
T COG1458 45 LGISCYIPP----SVYRELMGFMERNGCPEEVIAKIETWIVKK 83 (221)
T ss_pred cCeEEEeCh----HHHHHHHHHHHhCCCcHHHHHhhheeeEec
Confidence 468899997 234567777776654222233333444433
No 280
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=27.44 E-value=1.3e+02 Score=30.96 Aligned_cols=93 Identities=17% Similarity=0.198 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCC----------CHHHHHHHHcCCCC--CceeEec--C
Q 016389 178 MAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTP----------SLSAMIVNKYRLRG--NIRSYNL--G 243 (390)
Q Consensus 178 ~~~~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~P----------sla~~I~~~LgLr~--~v~~~dl--~ 243 (390)
..+.+++-..+-.+|+..++++.++.|+||+.|.+.-.|-..-| +...+|+++.|++. |-++=|+ +
T Consensus 64 ~~~l~~~l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV~H~p~~~~~~t~Qlgd~~~iA~~TGi~~v~dfR~~D~a~G 143 (371)
T COG2377 64 LAELDRALALLHAQAVAALLAEQGLLPRDIRAIGCHGQTVLHRPPGHAPDTVQLGDGPLIAELTGITVVGDFRRRDMAAG 143 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHhCceeecCCccccCCCCCCCCceeecCchHHHHHHhCCccHhhhcccccccC
Confidence 34455667778889999999999999999997776654432222 25679999999872 2234444 3
Q ss_pred CccchhHHHHHHHHHHHHhcCCCCeEEEEEe
Q 016389 244 GMGCSAGVIAVDLAKDLLQVNWNTYAVVVST 274 (390)
Q Consensus 244 gmGCsggl~aL~lA~~lL~a~~~~~aLVVst 274 (390)
|+| +=-+.|.+. -+-.+++.+..|+..
T Consensus 144 GqG-APLvPA~H~---Al~~~~~~~r~vlNi 170 (371)
T COG2377 144 GQG-APLVPAFHA---ALARAPRERRAVLNI 170 (371)
T ss_pred CCC-Ccchhhhhh---HhhcCCCCCeEEEec
Confidence 444 112223332 234455555555543
No 281
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=27.06 E-value=97 Score=39.74 Aligned_cols=74 Identities=14% Similarity=0.188 Sum_probs=48.9
Q ss_pred HHHHHHHHHcCCCCCCCcCEEEEe-ecCCCCCCCHHHHHHHHcCCCC---------CceeEecCCccchhHHHHHHHHHH
Q 016389 190 YGALDNLFSNTNVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYRLRG---------NIRSYNLGGMGCSAGVIAVDLAKD 259 (390)
Q Consensus 190 ~~Aa~~aL~kagi~p~dId~LIv~-~s~~~~~Psla~~I~~~LgLr~---------~v~~~dl~gmGCsggl~aL~lA~~ 259 (390)
.++++++++++|++|+|||.+-.. |.|-.--|.=..-|.+-||-.. .++ -++++..+++|+.++--+--
T Consensus 318 ~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvK-s~iGH~~~AAG~a~lik~~l 396 (2582)
T TIGR02813 318 AKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVK-SQIGHTKSTAGTAGMIKAVL 396 (2582)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccc-cccccchHhHHHHHHHHHHH
Confidence 578999999999999999988744 4443333443444555554321 233 35777788888888866666
Q ss_pred HHhcC
Q 016389 260 LLQVN 264 (390)
Q Consensus 260 lL~a~ 264 (390)
.|+.+
T Consensus 397 al~~~ 401 (2582)
T TIGR02813 397 ALHHK 401 (2582)
T ss_pred HHhcC
Confidence 66644
No 282
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=26.69 E-value=1.7e+02 Score=31.56 Aligned_cols=50 Identities=6% Similarity=0.165 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCC
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRL 233 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgL 233 (390)
+.-.+=..+.++++|+++|+++++||.++.+...- -.|.+..+|.+.+|-
T Consensus 301 ~~l~~~~~~~i~~~l~~a~~~~~~i~~V~LvGGss-riP~v~~~i~~~f~~ 350 (595)
T TIGR02350 301 ADLVERTKEPVRQALKDAGLSASDIDEVILVGGST-RIPAVQELVKDFFGK 350 (595)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHhHCcEEEEECCcc-cChHHHHHHHHHhCC
Confidence 33344455667899999999999999999775433 379999999999984
No 283
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=26.12 E-value=1.7e+02 Score=32.30 Aligned_cols=45 Identities=11% Similarity=0.166 Sum_probs=36.4
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCC
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 234 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr 234 (390)
....++++|+++|++++|||.||.+...- -.|.+..+|.+.+|-.
T Consensus 336 ~~~~v~~~L~~a~~~~~dId~VvLVGGss-riP~V~~~l~~~fg~~ 380 (657)
T PTZ00186 336 SIAPCKQCMKDAGVELKEINDVVLVGGMT-RMPKVVEEVKKFFQKD 380 (657)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEECCcc-cChHHHHHHHHHhCCC
Confidence 44567889999999999999998664322 4799999999999864
No 284
>PRK13411 molecular chaperone DnaK; Provisional
Probab=25.70 E-value=1.4e+02 Score=32.81 Aligned_cols=46 Identities=11% Similarity=0.261 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCC
Q 016389 187 QVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRL 233 (390)
Q Consensus 187 ~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgL 233 (390)
+=..+.++++|+++|++++|||.++.+... ...|.+..+|.+.+|-
T Consensus 308 ~~~~~~i~~~L~~a~~~~~~id~ViLvGGs-sriP~v~~~l~~~f~~ 353 (653)
T PRK13411 308 EATIEPMQQALKDAGLKPEDIDRVILVGGS-TRIPAVQEAIQKFFGG 353 (653)
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEECCC-CCcchHHHHHHHHcCC
Confidence 334567789999999999999988866432 2479999999999974
No 285
>TIGR01911 HesB_rel_seleno HesB-like selenoprotein. This model represents a family of small proteins related to HesB and its close homologs, which are likely to be invovlved in iron-sulfur cluster assembly (See TIGR00049 and pfam01521). Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain. A variable Cys/Ser/Gly-rich C-terminal region is not included in the seed alignment and model.
Probab=25.20 E-value=22 Score=28.94 Aligned_cols=19 Identities=21% Similarity=0.457 Sum_probs=16.5
Q ss_pred eeEecCCccchhHHHHHHH
Q 016389 238 RSYNLGGMGCSAGVIAVDL 256 (390)
Q Consensus 238 ~~~dl~gmGCsggl~aL~l 256 (390)
.++-+.+.||||.-+.+++
T Consensus 28 LRi~v~~gGCsG~~Y~~~l 46 (92)
T TIGR01911 28 IRIHFAGMGCMGPMFNLIA 46 (92)
T ss_pred EEEEEeCCCccCcccceEe
Confidence 6788888899999999986
No 286
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=24.89 E-value=1.3e+02 Score=33.06 Aligned_cols=45 Identities=7% Similarity=0.206 Sum_probs=36.5
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCC
Q 016389 189 MYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 234 (390)
Q Consensus 189 a~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr 234 (390)
..+.++++|+++|++++|||.++.+... ...|.+..+|.+.+|..
T Consensus 350 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~f~~~ 394 (663)
T PTZ00400 350 TIEPCEKCIKDAGVKKDELNDVILVGGM-TRMPKVSETVKKIFGKE 394 (663)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCc-cCChHHHHHHHHHhCCC
Confidence 3556789999999999999999966432 24799999999999864
No 287
>TIGR02435 CobG precorrin-3B synthase. An iron-sulfur protein. An oxygen atom from dioxygen is incorporated into the macrocycle at C-20. In the aerobic cobalamin biosythesis pathway, four enzymes are involved in the conversion of precorrin-3A to precorrin-6A. The first of the four steps is carried out by EC 1.14.13.83, precorrin-3B synthase (CobG), yielding precorrin-3B as the product. This is followed by three methylation reactions, which introduce a methyl group at C-17 (CobJ; EC 2.1.1.131), C-11 (CobM; EC 2.1.1.133) and C-1 (CobF; EC 2.1.1.152) of the macrocycle, giving rise to precorrin-4, precorrin-5 and precorrin-6A, respectively.
Probab=24.19 E-value=3.2e+02 Score=27.96 Aligned_cols=96 Identities=13% Similarity=0.123 Sum_probs=49.0
Q ss_pred CCcchHHHHHHHHHHcCCCceeeecCCCcCCCCCcchHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCEE--EEeecC--C
Q 016389 142 FDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGIL--VVNCSL--F 217 (390)
Q Consensus 142 ~~~~~~~~~~rI~~rsGI~~R~~~p~~~~~~pp~~~~~~~~eea~~la~~Aa~~aL~kagi~p~dId~L--Iv~~s~--~ 217 (390)
++.+.++.+..+.++.|.++-+.-+......+-- ..+. .+++.+.|++.|+....-+.. |++|.. +
T Consensus 268 i~~~~l~~la~ia~~~g~~~irlT~~Q~l~i~~i-----~~~~-----~~~~~~~l~~~gl~~~~~~~~~~v~aC~G~~~ 337 (390)
T TIGR02435 268 LTAAQLRGLAQLAQALGDGDLRLTPWRALLVLGL-----PPER-----ADAAQRALAALGLVTSASDPRARIIACTGAPG 337 (390)
T ss_pred cCHHHHHHHHHHHHHhCCCeEEEcCCcceEEcCC-----CHHH-----HHHHHHHHHHCCCCcCCCCCeeeEEECCCccc
Confidence 3444555555677777876655544332222200 0011 244455566777764333322 455532 2
Q ss_pred C-----CCCCHHHHHHHHcCCCCCceeEecCCccchhH
Q 016389 218 N-----PTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAG 250 (390)
Q Consensus 218 ~-----~~Psla~~I~~~LgLr~~v~~~dl~gmGCsgg 250 (390)
+ .+-.++..|.++++.+.. ..+.++ ||.-+
T Consensus 338 C~~~~~~t~~~a~~l~~~~~~~~~-~~i~vS--GC~n~ 372 (390)
T TIGR02435 338 CASALADTRADAEALAAYCEPTAP-ITVHLS--GCAKG 372 (390)
T ss_pred cccchhhHHHHHHHHHHHhcccCC-cEEEEe--CCccc
Confidence 2 233467788888775543 456665 68643
No 288
>PLN03184 chloroplast Hsp70; Provisional
Probab=23.55 E-value=2.5e+02 Score=31.06 Aligned_cols=50 Identities=10% Similarity=0.135 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCC
Q 016389 184 EAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 234 (390)
Q Consensus 184 ea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr 234 (390)
...+=....++++|+++|++++|||.++.+...- -.|.+..+|.+.+|..
T Consensus 343 ~l~~r~~~~i~~~L~~a~~~~~dId~ViLvGGss-riP~V~~~i~~~fg~~ 392 (673)
T PLN03184 343 DLLDRCKTPVENALRDAKLSFKDIDEVILVGGST-RIPAVQELVKKLTGKD 392 (673)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHccEEEEECCcc-ccHHHHHHHHHHhCCC
Confidence 3334455678899999999999999999775333 3799999999999864
No 289
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=22.91 E-value=2.7e+02 Score=30.32 Aligned_cols=51 Identities=8% Similarity=0.159 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCC
Q 016389 183 EEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 234 (390)
Q Consensus 183 eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr 234 (390)
+...+=..+.++++|+++|++++|||.++.+...- -.|.+..+|.+.+|..
T Consensus 303 ~~l~~~~~~~i~~~l~~a~~~~~~id~ViLvGGss-riP~v~~~l~~~fg~~ 353 (627)
T PRK00290 303 EDLVERTIEPCKQALKDAGLSVSDIDEVILVGGST-RMPAVQELVKEFFGKE 353 (627)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcC-CChHHHHHHHHHhCCC
Confidence 33334455677899999999999999999765433 3899999999999854
No 290
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=22.91 E-value=1.5e+02 Score=30.48 Aligned_cols=34 Identities=15% Similarity=0.337 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEee
Q 016389 181 AREEAEQVMYGALDNLFSNTNVNPKDIGILVVNC 214 (390)
Q Consensus 181 ~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~ 214 (390)
.+|...+|......+++++++++.+|+|.+|=.|
T Consensus 61 tresV~elV~dtl~e~~k~A~l~i~DL~FVVRST 94 (445)
T TIGR03285 61 TRESVAELVKDTLKESLKKAGLDIDDLDFVVRST 94 (445)
T ss_pred cHHHHHHHHHHHHHHHHHHcCCChhhccEEEecc
Confidence 4788999999999999999999999999998655
No 291
>TIGR00035 asp_race aspartate racemase.
Probab=22.08 E-value=4.5e+02 Score=24.49 Aligned_cols=114 Identities=13% Similarity=0.243 Sum_probs=57.5
Q ss_pred chHHHHHHHHHHcCCCc-eeeecCCCcCCC--CCcchH---HHHHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEeecCCC
Q 016389 145 SSLEFQRKILERSGLGE-ETYFPEAMHAIP--PKPSMA---AAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFN 218 (390)
Q Consensus 145 ~~~~~~~rI~~rsGI~~-R~~~p~~~~~~p--p~~~~~---~~~eea~~la~~Aa~~aL~kagi~p~dId~LIv~~s~~~ 218 (390)
...+|+++|.+.+.-.. ..+.|.-....| |+.+.. ...++......++++.+ ++.| +|++|..|.|..
T Consensus 14 at~~~~~~i~~~~~a~~d~~~~~~i~~~~~~~~dr~~~~~~~~~~~~~~~l~~~~~~L-~~~g-----~d~iviaCNTah 87 (229)
T TIGR00035 14 ATAELFRRINEKTKAKRDQEHPAEVLFNNPNIPDRTAYILGRGEDRPRPILIDIAVKL-ENAG-----ADFIIMPCNTAH 87 (229)
T ss_pred HHHHHHHHHHHHhHHhcCCCCCceeeeeCCCHHHHHHHHhcCCcchHHHHHHHHHHHH-HHcC-----CCEEEECCccHH
Confidence 45788888887765321 122222222222 111111 11234556666777766 3344 689999987632
Q ss_pred CCCCHHHHHHHHcCCCCCceeEecCCccchhHHHHHHHHHHHHhcCCCCeEEEEEecc-CCcCcc
Q 016389 219 PTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTEN-ITQNWY 282 (390)
Q Consensus 219 ~~Psla~~I~~~LgLr~~v~~~dl~gmGCsggl~aL~lA~~lL~a~~~~~aLVVstE~-~S~~~~ 282 (390)
. ....+++++++ .-++ | ++.+..-++....+++.|++|.. +...+|
T Consensus 88 ~---~~~~l~~~~~i----Pii~---i--------~~~~~~~~~~~~~~~VgvLaT~~T~~s~~y 134 (229)
T TIGR00035 88 K---FAEDIQKAIGI----PLIS---M--------IEETAEAVKEDGVKKAGLLGTKGTMKDGVY 134 (229)
T ss_pred H---HHHHHHHhCCC----CEec---h--------HHHHHHHHHHcCCCEEEEEecHHHHHhHHH
Confidence 1 12345555543 2232 2 23333333444568999998874 333443
No 292
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=21.99 E-value=1e+02 Score=31.27 Aligned_cols=68 Identities=22% Similarity=0.291 Sum_probs=48.4
Q ss_pred HHHHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHcCCCCCceeEecCC--------ccchhHHHHHHHHHHHHh
Q 016389 191 GALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGG--------MGCSAGVIAVDLAKDLLQ 262 (390)
Q Consensus 191 ~Aa~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~LgLr~~v~~~dl~g--------mGCsggl~aL~lA~~lL~ 262 (390)
-|+.++|+++|++.+|||.-=+|-- | --...-.+.+||+.|. ..|++| .||||.=+-..+...|-+
T Consensus 298 laipk~lk~aG~~~sdVd~~EiNEA-F---s~v~lA~iK~LgldP~--kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~ 371 (396)
T KOG1390|consen 298 LAIPKALKKAGLEQSDVDYWEINEA-F---SVVVLANIKKLGLDPS--KVNVHGGAVALGHPLGMSGARILVTLLHTLEQ 371 (396)
T ss_pred HHHHHHHHHcCcchhhhhHHhhhhh-h---hHHHHHHHHHhCCCHh--hccCCCceeecCCCcCCcchhHHHHHHHHHHh
Confidence 3789999999999999997655521 1 1223345789999764 355555 689998888888877766
Q ss_pred cC
Q 016389 263 VN 264 (390)
Q Consensus 263 a~ 264 (390)
.+
T Consensus 372 ~~ 373 (396)
T KOG1390|consen 372 KG 373 (396)
T ss_pred hC
Confidence 44
No 293
>TIGR03017 EpsF chain length determinant protein EpsF. Sequences in this family of proteins are members of the chain length determinant family (pfam02706) which includes the wzc protein from E.coli. This family of proteins are homologous to the EpsF protein of the methanolan biosynthesis operon of Methylobacillus species strain 12S. The distribution of this protein appears to be restricted to a subset of exopolysaccharide operons containing a syntenic grouping of genes including a variant of the EpsH exosortase protein. Exosortase has been proposed to be involved in the targetting and processing of proteins containing the PEP-CTERM domain to the exopolysaccharide layer.
Probab=21.96 E-value=4e+02 Score=27.26 Aligned_cols=38 Identities=18% Similarity=0.218 Sum_probs=26.3
Q ss_pred HHHHHHcCCCCCCCcCEEEEeecCCCCCCCHHHHHHHHc
Q 016389 193 LDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKY 231 (390)
Q Consensus 193 a~~aL~kagi~p~dId~LIv~~s~~~~~Psla~~I~~~L 231 (390)
++.+.++-.+.+..-+-||..+..+ +.|-.+..|+|.+
T Consensus 116 ~~~l~~~l~v~~~~~s~ii~is~~~-~dp~~A~~i~n~~ 153 (444)
T TIGR03017 116 ADLLLKKLEVKPSRESSVISIEFSG-VDPRFAATVANAF 153 (444)
T ss_pred HHHHHhCCeEEecCCceEEEEEEeC-CCHHHHHHHHHHH
Confidence 4455566677777667777666544 4788888888865
No 294
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=21.53 E-value=1.5e+02 Score=25.53 Aligned_cols=46 Identities=9% Similarity=0.052 Sum_probs=30.7
Q ss_pred HHHHHHcCCCCCCCcCEEEEeecC--CCCCCCHHHHHHHHcCCCCCceeEe
Q 016389 193 LDNLFSNTNVNPKDIGILVVNCSL--FNPTPSLSAMIVNKYRLRGNIRSYN 241 (390)
Q Consensus 193 a~~aL~kagi~p~dId~LIv~~s~--~~~~Psla~~I~~~LgLr~~v~~~d 241 (390)
.++++.+.||+++ +.+|+-|.. ....-+...++.+.+|.. ++.-+|
T Consensus 83 ~~~~~~~~GI~~~--~~vVvY~~~~~~g~~A~r~~~~l~~~G~~-~v~ild 130 (138)
T cd01445 83 FAAMFEAKGIDLD--KHLIATDGDDLGGFTACHIALAARLCGHP-DVAILD 130 (138)
T ss_pred HHHHHHHcCCCCC--CeEEEECCCCCcchHHHHHHHHHHHcCCC-CeEEeC
Confidence 5677899999987 456666643 222334555677889986 677665
No 295
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family. Several related four-subunit enzymes may exist in the same species. This model describes a subfamily of beta subunits, representing mostly pyruvate and 2-ketoisovalerate specific enzymes.
Probab=21.23 E-value=3.3e+02 Score=26.90 Aligned_cols=20 Identities=20% Similarity=0.489 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHcCCCCCCCc
Q 016389 188 VMYGALDNLFSNTNVNPKDI 207 (390)
Q Consensus 188 la~~Aa~~aL~kagi~p~dI 207 (390)
....|+.+++++.|++|+|.
T Consensus 11 ~i~~~~~~a~~~l~~~p~d~ 30 (287)
T TIGR02177 11 GILSALQRALAELNLDPEQV 30 (287)
T ss_pred HHHHHHHHHHHHhcCCCCCE
Confidence 46688899999999999874
No 296
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=20.11 E-value=1.1e+02 Score=27.59 Aligned_cols=35 Identities=20% Similarity=0.438 Sum_probs=26.3
Q ss_pred eEecCCccchhHHHHHHHHHHHHhcCCC-CeEEEEEe
Q 016389 239 SYNLGGMGCSAGVIAVDLAKDLLQVNWN-TYAVVVST 274 (390)
Q Consensus 239 ~~dl~gmGCsggl~aL~lA~~lL~a~~~-~~aLVVst 274 (390)
.|-+.| =|.||++|+.+|+.|-+.+.. ..++++.+
T Consensus 67 p~~L~G-~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~ 102 (229)
T PF00975_consen 67 PYVLAG-WSFGGILAFEMARQLEEAGEEVSRLILIDS 102 (229)
T ss_dssp SEEEEE-ETHHHHHHHHHHHHHHHTT-SESEEEEESC
T ss_pred Ceeehc-cCccHHHHHHHHHHHHHhhhccCceEEecC
Confidence 477777 599999999999999998653 45555543
Done!