BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>016397
MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAY
VEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG
SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGD
AYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSS
LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISAD
QSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLS
GKLCAQAIVQDYVLLAARGKGRLAEASMCP

High Scoring Gene Products

Symbol, full name Information P value
PDS3
phytoene desaturase 3
protein from Arabidopsis thaliana 3.1e-186
ZDS
zeta-carotene desaturase
protein from Arabidopsis thaliana 2.5e-25
PAO3
polyamine oxidase 3
protein from Arabidopsis thaliana 5.3e-06
PAO4
polyamine oxidase 4
protein from Arabidopsis thaliana 9.0e-05
PAO2
AT2G43020
protein from Arabidopsis thaliana 0.00032

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  016397
        (390 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2129515 - symbol:PDS3 "phytoene desaturase 3" ...  1806  3.1e-186  1
TAIR|locus:2114789 - symbol:ZDS "zeta-carotene desaturase...   294  2.5e-25   1
TAIR|locus:2077670 - symbol:PAO3 "polyamine oxidase 3" sp...   136  5.3e-06   1
TAIR|locus:2018571 - symbol:PAO4 "polyamine oxidase 4" sp...   125  9.0e-05   1
TAIR|locus:2053723 - symbol:PAO2 "AT2G43020" species:3702...   120  0.00032   1


>TAIR|locus:2129515 [details] [associations]
            symbol:PDS3 "phytoene desaturase 3" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast"
            evidence=ISM;IDA;TAS] [GO:0009536 "plastid" evidence=IEA]
            [GO:0016117 "carotenoid biosynthetic process" evidence=IEA;IDA]
            [GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016705
            "oxidoreductase activity, acting on paired donors, with
            incorporation or reduction of molecular oxygen" evidence=IEA]
            [GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009941
            "chloroplast envelope" evidence=IDA] [GO:0009534 "chloroplast
            thylakoid" evidence=IDA] [GO:0010155 "regulation of proton
            transport" evidence=RCA] [GO:0046777 "protein autophosphorylation"
            evidence=RCA] [GO:0016120 "carotene biosynthetic process"
            evidence=IDA] [GO:0016166 "phytoene dehydrogenase activity"
            evidence=IDA] UniPathway:UPA00803 InterPro:IPR002937
            InterPro:IPR014102 Pfam:PF01593 EMBL:CP002687
            GenomeReviews:CT486007_GR EMBL:Z97335 EMBL:AL161538 GO:GO:0009941
            GO:GO:0009534 GO:GO:0016117 GO:GO:0016705 GO:GO:0009509
            GO:GO:0016166 EMBL:L16237 EMBL:AF360196 EMBL:AY040007
            IPI:IPI00523820 PIR:F71403 RefSeq:NP_193157.1 UniGene:At.247
            ProteinModelPortal:Q07356 SMR:Q07356 STRING:Q07356 PaxDb:Q07356
            PRIDE:Q07356 EnsemblPlants:AT4G14210.1 GeneID:827061
            KEGG:ath:AT4G14210 TAIR:At4g14210 eggNOG:COG3349
            HOGENOM:HOG000150110 InParanoid:Q07356 KO:K02293 PhylomeDB:Q07356
            ProtClustDB:PLN02612 Genevestigator:Q07356 TIGRFAMs:TIGR02731
            Uniprot:Q07356
        Length = 566

 Score = 1806 (640.8 bits), Expect = 3.1e-186, P = 3.1e-186
 Identities = 336/388 (86%), Positives = 373/388 (96%)

Query:     1 MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAY 60
             MIFAMP+KPGEFSRFDFP+VLPAPLNGI AILRNNEMLTWPEK+KFAIGLLPA++GGQAY
Sbjct:   176 MIFAMPSKPGEFSRFDFPDVLPAPLNGIWAILRNNEMLTWPEKIKFAIGLLPAMVGGQAY 235

Query:    61 VEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 120
             VEAQDGL+V+EWM KQGVP+RVT EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG
Sbjct:   236 VEAQDGLSVKEWMEKQGVPERVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 295

Query:   121 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGD 180
             SKMAFLDGNPPERLC+P+V+HI+SLGGEV+LNSR++KIELNDDGTVK+FLLTNG+ ++GD
Sbjct:   296 SKMAFLDGNPPERLCMPVVDHIRSLGGEVQLNSRIKKIELNDDGTVKSFLLTNGSTVEGD 355

Query:   181 AYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSS 240
             AYVFA PVDILKL LP+ WKE+ YFK+L+KLVGVPVIN+HIWFDRKLKNTYDHLLFSRS+
Sbjct:   356 AYVFAAPVDILKLLLPDPWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDHLLFSRSN 415

Query:   241 LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISAD 300
             LLSVYADMSLTCKEYY+PN+SMLELVFAPAEEWIS +DS+IIDATMKEL KLFPDEISAD
Sbjct:   416 LLSVYADMSLTCKEYYDPNRSMLELVFAPAEEWISRTDSDIIDATMKELEKLFPDEISAD 475

Query:   301 QSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLS 360
             QSKAKI+KYHVVKTPRSVYKTIPNCEPCRPLQRSP+EGFYLAGDYTKQKYLASMEGAVLS
Sbjct:   476 QSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLS 535

Query:   361 GKLCAQAIVQDYVLLAARGKGRLAEASM 388
             GK C+Q+IVQDY LLAA G  +L+EA++
Sbjct:   536 GKFCSQSIVQDYELLAASGPRKLSEATV 563


>TAIR|locus:2114789 [details] [associations]
            symbol:ZDS "zeta-carotene desaturase" species:3702
            "Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
            [GO:0016117 "carotenoid biosynthetic process" evidence=IEA]
            [GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016719
            "carotene 7,8-desaturase activity" evidence=IEA;IDA] [GO:0055114
            "oxidation-reduction process" evidence=IEA] [GO:0009941
            "chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
            evidence=IDA] [GO:0016120 "carotene biosynthetic process"
            evidence=IDA] UniPathway:UPA00803 InterPro:IPR002937
            InterPro:IPR014103 Pfam:PF01593 InterPro:IPR016040 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
            GO:GO:0009941 EMBL:AC009465 GO:GO:0016117 GO:GO:0009509
            UniGene:At.24092 UniGene:At.71000 eggNOG:COG3349
            HOGENOM:HOG000150110 EMBL:U38550 EMBL:AF121947 EMBL:AY059920
            EMBL:AY072096 EMBL:AY096583 IPI:IPI00541621 RefSeq:NP_187138.1
            RefSeq:NP_974222.1 ProteinModelPortal:Q38893 SMR:Q38893
            STRING:Q38893 PaxDb:Q38893 PRIDE:Q38893 DNASU:819647
            EnsemblPlants:AT3G04870.1 EnsemblPlants:AT3G04870.2 GeneID:819647
            KEGG:ath:AT3G04870 TAIR:At3g04870 InParanoid:Q38893 KO:K00514
            OMA:DGNHIEM PhylomeDB:Q38893 ProtClustDB:PLN02487
            BioCyc:ARA:AT3G04870-MONOMER BioCyc:MetaCyc:AT3G04870-MONOMER
            Genevestigator:Q38893 GO:GO:0052887 GO:GO:0052886 GO:GO:0016719
            GO:GO:0052889 TIGRFAMs:TIGR02732 Uniprot:Q38893
        Length = 558

 Score = 294 (108.6 bits), Expect = 2.5e-25, P = 2.5e-25
 Identities = 74/235 (31%), Positives = 123/235 (52%)

Query:   172 TNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHI----WFD--- 224
             TN  ++  D YV A  V  +K  LP+ W+E  +F  + +L GVPV+ + +    W     
Sbjct:   323 TNKKIVKADVYVAACDVPGIKRLLPKEWRESRFFNDIYELEGVPVVTVQLRYNGWVTELQ 382

Query:   225 -----RKLKNTY--DHLLFSRSSLLSVYADMSLTCK-EYYNPNQ-SMLELVFAPAEEWIS 275
                  R+LK     D+LL++  +  S +AD++L    +YY   Q ++L+ V  P + ++ 
Sbjct:   383 DIELARQLKRAVGLDNLLYTPDADFSCFADLALASPADYYIEGQGTLLQCVLTPGDPYMR 442

Query:   276 CSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSP 335
               + +II+    ++ +LFP     + + +      VVK  +S+Y+  P  +P RP Q++P
Sbjct:   443 MPNDKIIEKVAMQVTELFPSSRGLEVTWSS-----VVKIAQSLYREAPGKDPFRPDQKTP 497

Query:   336 VEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASMCP 390
             ++ F+LAG YTKQ Y+ SMEGA LSG+  +  I      LA   K   + A+  P
Sbjct:   498 IKNFFLAGSYTKQDYIDSMEGATLSGRQASSYICDAGEELAELNKKLSSSATAVP 552

 Score = 227 (85.0 bits), Expect = 4.0e-16, P = 4.0e-16
 Identities = 62/232 (26%), Positives = 111/232 (47%)

Query:     7 NKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPE-KVKFAIGLLP---AII---GGQA 59
             NK G     DF   + AP++GI A L  N++  + + +   A+ L P   A++   G   
Sbjct:   144 NKDGTIGELDFRFPVGAPIHGIRAFLVTNQLKPYDKLRNSLALALSPVVKALVDPDGAMR 203

Query:    60 YVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKH 119
              +   D ++  +W   +G        ++  ++ AL FI+ D +S +C+L   + F  +  
Sbjct:   204 DIRNLDSISFSDWFLSKGGTRASIQRMWDPVAYALGFIDCDNMSARCMLTIFSLFATKTE 263

Query:   120 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKI--ELNDDGT--VKNFLL---T 172
              S +  L G+P   L  PI ++I   GG + L    ++I  + + DG   V    +   T
Sbjct:   264 ASLLRMLKGSPDVYLSGPIKQYITDRGGRIHLRWGCREILYDKSADGETYVTGLAISKAT 323

Query:   173 NGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD 224
             N  ++  D YV A  V  +K  LP+ W+E  +F  + +L GVPV+ + + ++
Sbjct:   324 NKKIVKADVYVAACDVPGIKRLLPKEWRESRFFNDIYELEGVPVVTVQLRYN 375


>TAIR|locus:2077670 [details] [associations]
            symbol:PAO3 "polyamine oxidase 3" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0005777 "peroxisome" evidence=IDA] [GO:0006598 "polyamine
            catabolic process" evidence=RCA;IDA] [GO:0046592 "polyamine oxidase
            activity" evidence=IDA] [GO:0055114 "oxidation-reduction process"
            evidence=IDA] [GO:0009611 "response to wounding" evidence=RCA]
            [GO:0009698 "phenylpropanoid metabolic process" evidence=RCA]
            [GO:0009805 "coumarin biosynthetic process" evidence=RCA]
            [GO:0042398 "cellular modified amino acid biosynthetic process"
            evidence=RCA] InterPro:IPR001613 InterPro:IPR002937 Pfam:PF01593
            PRINTS:PR00757 UniPathway:UPA00211 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0005777 EMBL:AL163527 GO:GO:0006598
            eggNOG:COG1231 KO:K13367 GO:GO:0052904 GO:GO:0052903 GO:GO:0046592
            GO:GO:0052902 GO:GO:0052901 GO:GO:0046208 HSSP:P50264
            HOGENOM:HOG000037651 ProtClustDB:PLN02268 EMBL:AY065025
            EMBL:AY143905 EMBL:AY085634 IPI:IPI00545156 PIR:T47787
            RefSeq:NP_191464.1 UniGene:At.27590 ProteinModelPortal:Q9LYT1
            SMR:Q9LYT1 IntAct:Q9LYT1 PRIDE:Q9LYT1 EnsemblPlants:AT3G59050.1
            GeneID:825074 KEGG:ath:AT3G59050 TAIR:At3g59050 InParanoid:Q9LYT1
            OMA:DVGCGWL PhylomeDB:Q9LYT1 BioCyc:ARA:AT3G59050-MONOMER
            BioCyc:MetaCyc:AT3G59050-MONOMER Genevestigator:Q9LYT1
            Uniprot:Q9LYT1
        Length = 488

 Score = 136 (52.9 bits), Expect = 5.3e-06, P = 5.3e-06
 Identities = 56/246 (22%), Positives = 104/246 (42%)

Query:   137 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP 196
             P++  + S G ++RL+ R+ KI     G VK      G+    DA V A P+ +LK  + 
Sbjct:   230 PVINTL-SKGLDIRLSHRITKISRRYSG-VK-VTTEKGDTFVADAAVIALPLGVLKSGM- 285

Query:   197 ENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYY 256
                  + +  +L +     + ++ +  + K+   +D++ +     L V A+ S  C  + 
Sbjct:   286 -----ITFEPKLPQWKQEAINDLGVGIENKIILNFDNVFWPNVEFLGVVAETSYGCSYFL 340

Query:   257 NPNQSMLE--LVFAPAEEWI----SCSDSEIIDATMKELAKLFPDEIS----------AD 300
             N +++     LV+ PA +        SD    +    +L K+ PD  S          +D
Sbjct:   341 NLHKATSHPVLVYMPAGQLARDIEKKSDEAAANFAFSQLQKILPDASSPINYLVSRWGSD 400

Query:   301 QSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLS 360
              +      Y +V  P  +Y+ +          R P++  + AG+ T   Y  S+ GA  +
Sbjct:   401 INSLGSYSYDIVNKPHDLYERL----------RVPLDNLFFAGEATSSSYPGSVHGAYST 450

Query:   361 GKLCAQ 366
             G L A+
Sbjct:   451 GVLAAE 456


>TAIR|locus:2018571 [details] [associations]
            symbol:PAO4 "polyamine oxidase 4" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0008131 "primary amine oxidase activity" evidence=ISS]
            [GO:0005777 "peroxisome" evidence=IDA] [GO:0006598 "polyamine
            catabolic process" evidence=RCA;IDA;IMP] [GO:0046592 "polyamine
            oxidase activity" evidence=IDA] [GO:0055114 "oxidation-reduction
            process" evidence=IDA] [GO:0009611 "response to wounding"
            evidence=RCA] [GO:0009698 "phenylpropanoid metabolic process"
            evidence=RCA] [GO:0009805 "coumarin biosynthetic process"
            evidence=RCA] [GO:0042398 "cellular modified amino acid
            biosynthetic process" evidence=RCA] InterPro:IPR001613
            InterPro:IPR002937 Pfam:PF01593 PRINTS:PR00757 InterPro:IPR016040
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005777 GO:GO:0000166
            Gene3D:3.40.50.720 GO:GO:0006598 eggNOG:COG1231 EMBL:AC007234
            GO:GO:0046592 GO:GO:0052901 GO:GO:0052895 GO:GO:0052894 HSSP:P50264
            HOGENOM:HOG000037651 ProtClustDB:PLN02268 EMBL:AF364953
            EMBL:AF370508 EMBL:BT000353 IPI:IPI00526751 PIR:D96682
            RefSeq:NP_176759.1 UniGene:At.16379 ProteinModelPortal:Q8H191
            SMR:Q8H191 STRING:Q8H191 PaxDb:Q8H191 EnsemblPlants:AT1G65840.1
            GeneID:842894 KEGG:ath:AT1G65840 TAIR:At1g65840 InParanoid:Q8H191
            OMA:GARWLHN PhylomeDB:Q8H191 BioCyc:ARA:AT1G65840-MONOMER
            BioCyc:MetaCyc:AT1G65840-MONOMER Genevestigator:Q8H191
            Uniprot:Q8H191
        Length = 497

 Score = 125 (49.1 bits), Expect = 9.0e-05, P = 9.0e-05
 Identities = 52/234 (22%), Positives = 95/234 (40%)

Query:   148 EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKR 207
             ++RLN RV K+    +  V    +  G     DA +   P+ +LK  L +   E+  +K 
Sbjct:   240 DIRLNHRVTKVVRTSNNKVI-VAVEGGTNFVADAVIITVPIGVLKANLIQFEPELPQWKT 298

Query:   208 LEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLE--L 265
                + G+ V N     + K+   +D   +     L + A  S  C  + N +++     L
Sbjct:   299 -SAISGLGVGN-----ENKIALRFDRAFWPNVEFLGMVAPTSYACGYFLNLHKATGHPVL 352

Query:   266 VFAPA----EEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRS--VY 319
             V+  A    ++    SD    +  M +L K+FPD  + D ++  + ++           Y
Sbjct:   353 VYMAAGNLAQDLEKLSDEATANFVMLQLKKMFPD--APDPAQYLVTRWGTDPNTLGCYAY 410

Query:   320 KTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 373
               +   E   P    PV+  +  G+    ++  S  GA L+G   +Q   Q Y+
Sbjct:   411 DVVGMPEDLYPRLGEPVDNIFFGGEAVNVEHQGSAHGAFLAGVSASQNC-QRYI 463


>TAIR|locus:2053723 [details] [associations]
            symbol:PAO2 "AT2G43020" species:3702 "Arabidopsis
            thaliana" [GO:0008131 "primary amine oxidase activity"
            evidence=ISS] [GO:0006598 "polyamine catabolic process"
            evidence=IDA] [GO:0046592 "polyamine oxidase activity"
            evidence=IDA] [GO:0055114 "oxidation-reduction process"
            evidence=IDA] [GO:0009409 "response to cold" evidence=RCA]
            [GO:0009414 "response to water deprivation" evidence=RCA]
            [GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
            InterPro:IPR001613 InterPro:IPR002937 Pfam:PF01593 PRINTS:PR00757
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0006598
            eggNOG:COG1231 GO:GO:0046592 EMBL:AF364952 EMBL:AC006224
            EMBL:AY074846 EMBL:BT029025 IPI:IPI00523923 PIR:A84861
            RefSeq:NP_181830.1 UniGene:At.27901 HSSP:P50264
            ProteinModelPortal:Q9SKX5 SMR:Q9SKX5 PRIDE:Q9SKX5
            EnsemblPlants:AT2G43020.1 GeneID:818904 KEGG:ath:AT2G43020
            TAIR:At2g43020 HOGENOM:HOG000037651 InParanoid:Q9SKX5 OMA:DKEWIGM
            PhylomeDB:Q9SKX5 ProtClustDB:PLN02268 Genevestigator:Q9SKX5
            Uniprot:Q9SKX5
        Length = 490

 Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
 Identities = 61/253 (24%), Positives = 107/253 (42%)

Query:   137 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKL--- 193
             P++  +   G ++R+  RV KI    +G VK     NG     DA V A P+ +LK    
Sbjct:   229 PVINTLAK-GLDIRVGHRVTKIVRRYNG-VK-VTTENGQTFVADAAVIAVPLGVLKSGTI 285

Query:   194 ----QLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMS 249
                 +LPE WK+ A    +  L GV + N       K+   ++ + + +   L V A+ S
Sbjct:   286 KFEPKLPE-WKQEA----INDL-GVGIEN-------KIILHFEKVFWPKVEFLGVVAETS 332

Query:   250 LTCKEYYNPNQSMLE--LVFAPAEEWIS----CSDSEIIDATMKELAKLFPDEI------ 297
               C  + N +++     LV+ PA +        SD    +  + +L ++ PD +      
Sbjct:   333 YGCSYFLNLHKATGHPVLVYMPAGQLAKDIEKMSDEAAANFAVLQLQRILPDALPPVQYL 392

Query:   298 ----SADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLAS 353
                  +D +      Y +V  P  +Y+ +          R PV+  + AG+ T   +  S
Sbjct:   393 VSRWGSDVNSMGSYSYDIVGKPHDLYERL----------RVPVDNLFFAGEATSSSFPGS 442

Query:   354 MEGAVLSGKLCAQ 366
             + GA  +G + A+
Sbjct:   443 VHGAYSTGLMAAE 455


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.137   0.410    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      390       390   0.00094  117 3  11 22  0.38    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  259 KB (2138 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  31.75u 0.22s 31.97t   Elapsed:  00:00:01
  Total cpu time:  31.75u 0.22s 31.97t   Elapsed:  00:00:01
  Start:  Sat May 11 04:57:20 2013   End:  Sat May 11 04:57:21 2013

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