BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016397
(390 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P28553|CRTI_SOYBN Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Glycine max
GN=PDS1 PE=2 SV=1
Length = 570
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/388 (87%), Positives = 369/388 (95%)
Query: 1 MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAY 60
MIFAMPNKPGEFSRFDFPEVLP+PLNGI AILRNNEMLTWPEKVKFAIGLLPA++GGQ Y
Sbjct: 182 MIFAMPNKPGEFSRFDFPEVLPSPLNGIWAILRNNEMLTWPEKVKFAIGLLPAMLGGQPY 241
Query: 61 VEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 120
VEAQDGL+VQEWM+KQGVP+RV EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG
Sbjct: 242 VEAQDGLSVQEWMKKQGVPERVADEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 301
Query: 121 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGD 180
SKMAFLDGNPPERLC+PIV++IQSLGGEV LNSR+QKIELNDDGTVK+FLL NG V++GD
Sbjct: 302 SKMAFLDGNPPERLCMPIVDYIQSLGGEVHLNSRIQKIELNDDGTVKSFLLNNGKVMEGD 361
Query: 181 AYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSS 240
AYVFATPVDILKL LP+NWK + YF+RL+KLVGVPVIN+HIWFDRKLKNTYDHLLFSRS
Sbjct: 362 AYVFATPVDILKLLLPDNWKGIPYFQRLDKLVGVPVINVHIWFDRKLKNTYDHLLFSRSP 421
Query: 241 LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISAD 300
LLSVYADMS+TCKEYY+PNQSMLELVFAPAEEWIS SD +II ATM ELAKLFPDEISAD
Sbjct: 422 LLSVYADMSVTCKEYYSPNQSMLELVFAPAEEWISRSDDDIIQATMTELAKLFPDEISAD 481
Query: 301 QSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLS 360
QSKAKI+KYHVVKTPRSVYKT+PNCEPCRP+QRSP+EGFYLAGDYTKQKYLASMEGAVLS
Sbjct: 482 QSKAKILKYHVVKTPRSVYKTVPNCEPCRPIQRSPIEGFYLAGDYTKQKYLASMEGAVLS 541
Query: 361 GKLCAQAIVQDYVLLAARGKGRLAEASM 388
GKLCAQAIVQD LLA RG+ R+A+AS+
Sbjct: 542 GKLCAQAIVQDSELLATRGQKRMAKASV 569
>sp|Q07356|PDS_ARATH 15-cis-phytoene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=PDS PE=1 SV=1
Length = 566
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/388 (86%), Positives = 373/388 (96%)
Query: 1 MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAY 60
MIFAMP+KPGEFSRFDFP+VLPAPLNGI AILRNNEMLTWPEK+KFAIGLLPA++GGQAY
Sbjct: 176 MIFAMPSKPGEFSRFDFPDVLPAPLNGIWAILRNNEMLTWPEKIKFAIGLLPAMVGGQAY 235
Query: 61 VEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 120
VEAQDGL+V+EWM KQGVP+RVT EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG
Sbjct: 236 VEAQDGLSVKEWMEKQGVPERVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 295
Query: 121 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGD 180
SKMAFLDGNPPERLC+P+V+HI+SLGGEV+LNSR++KIELNDDGTVK+FLLTNG+ ++GD
Sbjct: 296 SKMAFLDGNPPERLCMPVVDHIRSLGGEVQLNSRIKKIELNDDGTVKSFLLTNGSTVEGD 355
Query: 181 AYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSS 240
AYVFA PVDILKL LP+ WKE+ YFK+L+KLVGVPVIN+HIWFDRKLKNTYDHLLFSRS+
Sbjct: 356 AYVFAAPVDILKLLLPDPWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDHLLFSRSN 415
Query: 241 LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISAD 300
LLSVYADMSLTCKEYY+PN+SMLELVFAPAEEWIS +DS+IIDATMKEL KLFPDEISAD
Sbjct: 416 LLSVYADMSLTCKEYYDPNRSMLELVFAPAEEWISRTDSDIIDATMKELEKLFPDEISAD 475
Query: 301 QSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLS 360
QSKAKI+KYHVVKTPRSVYKTIPNCEPCRPLQRSP+EGFYLAGDYTKQKYLASMEGAVLS
Sbjct: 476 QSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLS 535
Query: 361 GKLCAQAIVQDYVLLAARGKGRLAEASM 388
GK C+Q+IVQDY LLAA G +L+EA++
Sbjct: 536 GKFCSQSIVQDYELLAASGPRKLSEATV 563
>sp|P80093|PDS_CAPAN 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum
annuum GN=PDS PE=1 SV=1
Length = 582
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/388 (85%), Positives = 368/388 (94%)
Query: 1 MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAY 60
MIFAMPNKPGEFSRFDFPE LPAPLNGILAIL+NNEMLTWPEKVKFAIGLLPA++GGQ+Y
Sbjct: 194 MIFAMPNKPGEFSRFDFPEALPAPLNGILAILKNNEMLTWPEKVKFAIGLLPAMLGGQSY 253
Query: 61 VEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 120
VEAQDG++V++WMRKQGVPDRVT EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG
Sbjct: 254 VEAQDGISVKDWMRKQGVPDRVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 313
Query: 121 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGD 180
SKMAFLDGNPPERLC+PIVEHI+S GG+VRLNSR++KIELN+DG+VK F+L +G+ I+GD
Sbjct: 314 SKMAFLDGNPPERLCMPIVEHIESKGGQVRLNSRIKKIELNEDGSVKCFILNDGSTIEGD 373
Query: 181 AYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSS 240
A+VFATPVDI KL LPE+WKE+ YF++LEKLVGVPVIN+HIWFDRKLKNT D+LLFSRS
Sbjct: 374 AFVFATPVDIFKLLLPEDWKEIPYFQKLEKLVGVPVINVHIWFDRKLKNTSDNLLFSRSP 433
Query: 241 LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISAD 300
LLSVYADMS+TCKEYY+PN+SMLELVFAPAEEW+S SDSEIIDATMKELAKLFPDEISAD
Sbjct: 434 LLSVYADMSVTCKEYYDPNKSMLELVFAPAEEWVSRSDSEIIDATMKELAKLFPDEISAD 493
Query: 301 QSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLS 360
QSKAKI+KYHVVKTPRSVYKT+P CEPCR LQRSPVEGFYLAGDYTKQKYLASMEGAVLS
Sbjct: 494 QSKAKILKYHVVKTPRSVYKTVPGCEPCRLLQRSPVEGFYLAGDYTKQKYLASMEGAVLS 553
Query: 361 GKLCAQAIVQDYVLLAARGKGRLAEASM 388
GKLCAQAIVQDY LL R + +LAE S+
Sbjct: 554 GKLCAQAIVQDYELLVGRSQRKLAETSV 581
>sp|Q40406|CRTI_NARPS Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Narcissus
pseudonarcissus GN=PDS1 PE=1 SV=1
Length = 570
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/380 (86%), Positives = 358/380 (94%)
Query: 1 MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAY 60
MIFAMPNKPGEFSRFDFPEVLPAPLNGI AILRNNEMLTWPEKV+FAIGLLPA++GGQAY
Sbjct: 181 MIFAMPNKPGEFSRFDFPEVLPAPLNGIWAILRNNEMLTWPEKVRFAIGLLPAMVGGQAY 240
Query: 61 VEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 120
VEAQDGLTV EWMR+QGVPDRV EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG
Sbjct: 241 VEAQDGLTVTEWMRRQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 300
Query: 121 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGD 180
SKMAFLDGNPPERLC+PIV+HIQSLGG +LNSR+QKIELN DGTVK+F+L NGN+I GD
Sbjct: 301 SKMAFLDGNPPERLCMPIVDHIQSLGGRAQLNSRLQKIELNPDGTVKHFVLGNGNIITGD 360
Query: 181 AYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSS 240
AYV A PVDILKL LP+ W+E+ YF++L+KLVGVPVIN+HIWFDRKLKNTYDHLLF+RS
Sbjct: 361 AYVVAAPVDILKLLLPQEWREIPYFQKLDKLVGVPVINVHIWFDRKLKNTYDHLLFTRSP 420
Query: 241 LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISAD 300
LLSVYADMS+TCKEYY+PN+SMLELVFAPAEEWIS SDSEII+ TMKELAKLFPDEI+AD
Sbjct: 421 LLSVYADMSVTCKEYYDPNRSMLELVFAPAEEWISRSDSEIIERTMKELAKLFPDEIAAD 480
Query: 301 QSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLS 360
QSKAKI+KYHVVKTPRSVYKTIP+CEPCRPLQRSP+EGFYLAGDYT QKYLASMEGAVLS
Sbjct: 481 QSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIEGFYLAGDYTNQKYLASMEGAVLS 540
Query: 361 GKLCAQAIVQDYVLLAARGK 380
GKLCAQ+IVQDY LL R K
Sbjct: 541 GKLCAQSIVQDYELLVRRSK 560
>sp|P28554|CRTI_SOLLC Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum
lycopersicum GN=PDS PE=2 SV=1
Length = 583
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/388 (86%), Positives = 371/388 (95%)
Query: 1 MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAY 60
MIFAMP+KPGEFSRFDF E LPAPLNGILAIL+NNEMLTWPEKVKFAIGLLPA++GGQ+Y
Sbjct: 195 MIFAMPSKPGEFSRFDFSEALPAPLNGILAILKNNEMLTWPEKVKFAIGLLPAMLGGQSY 254
Query: 61 VEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 120
VEAQDG++V++WMRKQGVPDRVT EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG
Sbjct: 255 VEAQDGISVKDWMRKQGVPDRVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 314
Query: 121 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGD 180
SKMAFLDGNPPERLC+PIVEHI+S GG+VRLNSR++KIELN+DG+VK+F+L++G+ I+GD
Sbjct: 315 SKMAFLDGNPPERLCMPIVEHIESKGGQVRLNSRIKKIELNEDGSVKSFILSDGSAIEGD 374
Query: 181 AYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSS 240
A+VFA PVDI KL LPE+WKE+ YF++LEKLVGVPVIN+HIWFDRKLKNTYDHLLFSRSS
Sbjct: 375 AFVFAAPVDIFKLLLPEDWKEIPYFQKLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSS 434
Query: 241 LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISAD 300
LLSVYADMS+TCKEYYNPNQSMLELVFAPAEEWIS SDSEIIDATMKELA LFPDEISAD
Sbjct: 435 LLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMKELATLFPDEISAD 494
Query: 301 QSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLS 360
QSKAKI+KYHVVKTPRSVYKT+P CEPCRPLQRSP+EGFYLAGDYTKQKYLASMEGAVLS
Sbjct: 495 QSKAKILKYHVVKTPRSVYKTVPGCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLS 554
Query: 361 GKLCAQAIVQDYVLLAARGKGRLAEASM 388
GKLCAQAIVQDY LL R + +L+EAS+
Sbjct: 555 GKLCAQAIVQDYELLVGRSQKKLSEASV 582
>sp|Q0DUI8|CRTI_ORYSJ Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. japonica GN=PDS PE=2 SV=2
Length = 578
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/378 (86%), Positives = 361/378 (95%)
Query: 1 MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAY 60
MIFAMPNKPGEFSRFDFPE LPAPLNGI AILRNNEMLTWPEKVKFA+GLLPA++GGQAY
Sbjct: 188 MIFAMPNKPGEFSRFDFPETLPAPLNGIWAILRNNEMLTWPEKVKFALGLLPAMVGGQAY 247
Query: 61 VEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 120
VEAQDG TV EWM+KQGVPDRV EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG
Sbjct: 248 VEAQDGFTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 307
Query: 121 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGD 180
SKMAFLDGNPPERLC+PIV+H++SLGGEVRLNSR+QKIELN DGTVK+F LT+G I GD
Sbjct: 308 SKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSRIQKIELNPDGTVKHFALTDGTQITGD 367
Query: 181 AYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSS 240
AYVFATPVDILKL +P+ WKE++YFK+LEKLVGVPVIN+HIWFDRKLKNTYDHLLFSRSS
Sbjct: 368 AYVFATPVDILKLLVPQEWKEISYFKKLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSS 427
Query: 241 LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISAD 300
LLSVYADMS+TCKEYY+PN+SMLELVFAPAEEW+ SD+EII+ATM+ELAKLFPDEI+AD
Sbjct: 428 LLSVYADMSVTCKEYYDPNRSMLELVFAPAEEWVGRSDTEIIEATMQELAKLFPDEIAAD 487
Query: 301 QSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLS 360
QSKAKI+KYHVVKTPRSVYKTIP+CEPCRPLQRSP+EGFYLAGDYTKQKYLASMEGAVLS
Sbjct: 488 QSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLS 547
Query: 361 GKLCAQAIVQDYVLLAAR 378
GKLCAQ++V+DY +L+ R
Sbjct: 548 GKLCAQSVVEDYKMLSRR 565
>sp|A2XDA1|CRTI_ORYSI Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. indica GN=PDS1 PE=2 SV=2
Length = 578
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/378 (86%), Positives = 361/378 (95%)
Query: 1 MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAY 60
MIFAMPNKPGEFSRFDFPE LPAPLNGI AILRNNEMLTWPEKVKFA+GLLPA++GGQAY
Sbjct: 188 MIFAMPNKPGEFSRFDFPETLPAPLNGIWAILRNNEMLTWPEKVKFALGLLPAMVGGQAY 247
Query: 61 VEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 120
VEAQDG TV EWM+KQGVPDRV EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG
Sbjct: 248 VEAQDGFTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 307
Query: 121 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGD 180
SKMAFLDGNPPERLC+PIV+H++SLGGEVRLNSR+QKIELN DGTVK+F LT+G I GD
Sbjct: 308 SKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSRIQKIELNPDGTVKHFALTDGTQITGD 367
Query: 181 AYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSS 240
AYVFATPVDILKL +P+ WKE++YFK+LEKLVGVPVIN+HIWFDRKLKNTYDHLLFSRSS
Sbjct: 368 AYVFATPVDILKLLVPQEWKEISYFKKLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSS 427
Query: 241 LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISAD 300
LLSVYADMS+TCKEYY+PN+SMLELVFAPAEEW+ SD+EII+ATM+ELAKLFPDEI+AD
Sbjct: 428 LLSVYADMSVTCKEYYDPNRSMLELVFAPAEEWVGRSDTEIIEATMQELAKLFPDEIAAD 487
Query: 301 QSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLS 360
QSKAKI+KYHVVKTPRSVYKTIP+CEPCRPLQRSP+EGFYLAGDYTKQKYLASMEGAVLS
Sbjct: 488 QSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLS 547
Query: 361 GKLCAQAIVQDYVLLAAR 378
GKLCAQ++V+DY +L+ R
Sbjct: 548 GKLCAQSVVEDYKMLSRR 565
>sp|P49086|CRTI_MAIZE Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays
GN=PDS1 PE=2 SV=1
Length = 571
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/383 (85%), Positives = 356/383 (92%)
Query: 1 MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAY 60
MIFAMPNKPGEFSRFDFPE LPAP+NGI AILRNNEMLTWPEKVKFAIGLLPA++GGQ Y
Sbjct: 180 MIFAMPNKPGEFSRFDFPETLPAPINGIWAILRNNEMLTWPEKVKFAIGLLPAMVGGQPY 239
Query: 61 VEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 120
VEAQDGLTV EWM+KQGVPDRV EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG
Sbjct: 240 VEAQDGLTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 299
Query: 121 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGD 180
SKMAFLDGNPPERLC+PIV+HI+S GGEVRLNSR++KIELN DGTVK+F L++G I GD
Sbjct: 300 SKMAFLDGNPPERLCMPIVDHIRSRGGEVRLNSRIKKIELNPDGTVKHFALSDGTQITGD 359
Query: 181 AYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSS 240
AYV ATPVDI KL +P+ W E+ YFK+LEKLVGVPVIN+HIWFDRKL NTYDHLLFSRSS
Sbjct: 360 AYVCATPVDIFKLLVPQEWSEITYFKKLEKLVGVPVINVHIWFDRKLNNTYDHLLFSRSS 419
Query: 241 LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISAD 300
LLSVYADMS+TCKEYY+PN+SMLELVFAPA+EWI SD+EIIDATM+ELAKLFPDEI+AD
Sbjct: 420 LLSVYADMSVTCKEYYDPNRSMLELVFAPADEWIGRSDTEIIDATMEELAKLFPDEIAAD 479
Query: 301 QSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLS 360
QSKAKI+KYH+VKTPRSVYKT+PNCEPCRPLQRSP+EGFYLAGDYTKQKYLASMEGAVLS
Sbjct: 480 QSKAKILKYHIVKTPRSVYKTVPNCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLS 539
Query: 361 GKLCAQAIVQDYVLLAARGKGRL 383
GKLCAQ+IVQDY LA R + L
Sbjct: 540 GKLCAQSIVQDYSRLALRSQKSL 562
>sp|P26294|PDS_SYNE7 15-cis-phytoene desaturase OS=Synechococcus elongatus (strain PCC
7942) GN=pds PE=1 SV=1
Length = 474
Score = 477 bits (1228), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/394 (60%), Positives = 292/394 (74%), Gaps = 8/394 (2%)
Query: 1 MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAY 60
MIF P KPG +SRFDFP++ PAP+NG+ AIL NN+MLTW EK+KF +GLLPA+I GQ+Y
Sbjct: 84 MIFNQPTKPGTYSRFDFPDI-PAPINGVAAILSNNDMLTWEEKIKFGLGLLPAMIRGQSY 142
Query: 61 VEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 120
VE D + EW+RKQ +P+RV EVFIAM+KALNFI+PDE+S +L ALNRFLQEK G
Sbjct: 143 VEEMDQYSWTEWLRKQNIPERVNDEVFIAMAKALNFIDPDEISATVVLTALNRFLQEKKG 202
Query: 121 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-----GN 175
S MAFLDG PPERLC PIVEH+Q+ GG+V LN+ +++ LNDD +V+ F +
Sbjct: 203 SMMAFLDGAPPERLCQPIVEHVQARGGDVLLNAPLKEFVLNDDSSVQAFRIAGIKGQEEQ 262
Query: 176 VIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLL 235
+I+ DAYV A PVD LKL LP+ WK M YF++L+ L GVPVINIH+WFDRKL + DHLL
Sbjct: 263 LIEADAYVSALPVDPLKLLLPDAWKAMPYFQQLDGLQGVPVINIHLWFDRKLTDI-DHLL 321
Query: 236 FSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPD 295
FSRS LLSVYADMS TC+EY +P++SMLELVFAPA++WI SD +I+ ATM E+ KLFP
Sbjct: 322 FSRSPLLSVYADMSNTCREYEDPDRSMLELVFAPAKDWIGRSDEDILAATMAEIEKLFPQ 381
Query: 296 EISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASME 355
S ++ A++ KY +VKTP SVYK P + RP Q SP+ F+L GDYT Q+YLASME
Sbjct: 382 HFSG-ENPARLRKYKIVKTPLSVYKATPGRQQYRPDQASPIANFFLTGDYTMQRYLASME 440
Query: 356 GAVLSGKLCAQAIVQDYVLLAARGKGRLAEASMC 389
GAVLSGKL AQAI+ L R GR AS
Sbjct: 441 GAVLSGKLTAQAIIARQDELQRRSSGRPLAASQA 474
>sp|P29273|CRTI_SYNY3 Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=pds PE=3 SV=2
Length = 472
Score = 477 bits (1227), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/377 (61%), Positives = 287/377 (76%), Gaps = 8/377 (2%)
Query: 1 MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAY 60
MIF P KPG +SRFDFP++ PAP+NG++AILRNN+MLTWPEK++F +GLLPAI+ GQ+Y
Sbjct: 84 MIFNQPEKPGTYSRFDFPDI-PAPINGLVAILRNNDMLTWPEKIRFGLGLLPAIVQGQSY 142
Query: 61 VEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHG 120
VE D T EWM KQ +P R+ EVFIAMSKALNFI+PDE+S +L ALNRFLQEK+G
Sbjct: 143 VEEMDKYTWSEWMAKQNIPPRIEKEVFIAMSKALNFIDPDEISATILLTALNRFLQEKNG 202
Query: 121 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-----GN 175
SKMAFLDG PPERLC P+V++I GGEV +N +++I LN+DG+VK +L+
Sbjct: 203 SKMAFLDGAPPERLCQPLVDYITERGGEVHINKPLKEILLNEDGSVKGYLIRGLDGAPDE 262
Query: 176 VIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLL 235
VI D YV A PVD LK +P W+E FK+++ L GVPVIN+H+WFDRKL + DHLL
Sbjct: 263 VITADLYVSAMPVDPLKTMVPAPWREYPEFKQIQGLEGVPVINLHLWFDRKLTDI-DHLL 321
Query: 236 FSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPD 295
FSRS LLSVYADMS TC+EY +P++SMLELV APA++WI SD EI+ ATM E+ +LFP
Sbjct: 322 FSRSPLLSVYADMSNTCREYSDPDKSMLELVLAPAQDWIGKSDEEIVAATMAEIKQLFPQ 381
Query: 296 EISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASME 355
+ D + A+++K HVVKTPRSVYK P + CRP QR+ V FYLAGD+T QKYL SME
Sbjct: 382 HFNGD-NPARLLKSHVVKTPRSVYKATPGRQACRPDQRTSVPNFYLAGDFTMQKYLGSME 440
Query: 356 GAVLSGKLCAQAIVQDY 372
GAVLSGK CAQAI D+
Sbjct: 441 GAVLSGKQCAQAIAADF 457
>sp|Q31N27|ZDS_SYNE7 Probable zeta-carotene desaturase OS=Synechococcus elongatus
(strain PCC 7942) GN=zds PE=3 SV=1
Length = 481
Score = 196 bits (497), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 210/400 (52%), Gaps = 36/400 (9%)
Query: 7 NKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVK--FAIGLLPAIIGGQAY---- 60
NK GE DF + AP NG+ A ++ LTW +K++ A+G P + G Y
Sbjct: 88 NKGGEVGELDFRFPIGAPFNGLKAFFTTSQ-LTWLDKLQNALALGTSPLVRGILDYEGAM 146
Query: 61 --VEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEK 118
+ A D ++ +W R G + ++ ++ AL FI+ + +S +C+L F +
Sbjct: 147 KIIRALDRISFADWFRSHGGSEGSLKRMWNPIAYALGFIDTENISARCMLTVFQMFAAKT 206
Query: 119 HGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIEL---NDDGTVKNFLLTNGN 175
SK+ L G+P E L PI+++IQ+ G + L RV++IE N V + +G+
Sbjct: 207 EASKLNLLAGSPAEYLHKPILDYIQARGATLHLRRRVREIEYTETNGQTVVTGLQIADGD 266
Query: 176 VID---GDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD-------- 224
++ D Y+ A V ++ LPE W++ + F + KL VPV + + FD
Sbjct: 267 AVERVEADVYLAACDVPGIQRLLPEAWRKWSEFDNIYKLDAVPVATVQLRFDGWVTELGD 326
Query: 225 RKLKNTYDH------LLFSRSSLLSVYADMSLTC-KEYYNPNQ-SMLELVFAPAEEWISC 276
R+ ++ DH LL++ + S + D++L+ K+YY Q S+L+ V P + +I+
Sbjct: 327 REKRHQLDHATGLDNLLYTADADFSCFTDLALSSPKDYYRKGQGSLLQCVLTPGDPFIAM 386
Query: 277 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPV 336
+ +I +K++ +LFP + + + +VVK +S+Y+ P +P RP Q++P+
Sbjct: 387 KNEDIAQHVLKQVHELFPSSRDLNMTWS-----NVVKLAQSLYREAPGMDPFRPDQKTPI 441
Query: 337 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLA 376
F+LAG YT+Q Y+ SMEGA +SG+ A+A+++ + A
Sbjct: 442 ANFFLAGSYTQQDYIDSMEGATISGRRAAKAMLEAQAIAA 481
>sp|Q9SE20|ZDS_SOLLC Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum
lycopersicum GN=ZDS PE=2 SV=1
Length = 588
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 203/410 (49%), Gaps = 36/410 (8%)
Query: 7 NKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPE-KVKFAIGLLPAII------GGQA 59
NK GE DF + APL+GI A L N++ + + + A+ L P + G
Sbjct: 167 NKGGEIGELDFRFPVGAPLHGINAFLSTNQLKIYDKARNAVALALSPVVRALVDPDGALQ 226
Query: 60 YVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKH 119
+ D ++ EW +G ++ ++ AL FI+ D +S +C+L F +
Sbjct: 227 QIRDLDNVSFSEWFLSKGGTRASIQRMWDPVAYALGFIDCDNMSARCMLTIFALFATKTE 286
Query: 120 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKI--ELNDDGTVKNFLL-----T 172
S + L G+P L PI ++I GG L +++ E + DG++ L T
Sbjct: 287 ASLLRMLKGSPDVYLSGPIKKYIMDKGGRFHLRWGCREVLYETSSDGSMYVSGLAMSKAT 346
Query: 173 NGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD-------- 224
++ DAYV A V +K +P+ W+E+ +F + KLVGVPV+ + + ++
Sbjct: 347 QKKIVKADAYVAACDVPGIKRLVPQKWRELEFFDNIYKLVGVPVVTVQLRYNGWVTELQD 406
Query: 225 ----RKLKNT--YDHLLFSRSSLLSVYADMSLTC-KEYYNPNQ-SMLELVFAPAEEWISC 276
R+LK D+LL++ + S +AD++L +YY Q S+L+ V P + ++
Sbjct: 407 LERSRQLKRAAGLDNLLYTPDADFSCFADLALASPDDYYIEGQGSLLQCVLTPGDPYMPL 466
Query: 277 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPV 336
S+ EII K++ LFP ++ V+K +S+Y+ P +P RP Q++PV
Sbjct: 467 SNDEIIKRVTKQVLALFPSS-----QGLEVTWSSVLKIGQSLYREGPGKDPFRPDQKTPV 521
Query: 337 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ-DYVLLAARGKGRLAE 385
E F+LAG YTKQ Y+ SMEGA LSG+ + I L+A R K AE
Sbjct: 522 ENFFLAGSYTKQDYIDSMEGATLSGRQASAYICNVGEQLMALRKKITAAE 571
>sp|Q9FV46|ZDS_TARER Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes
erecta PE=2 SV=1
Length = 587
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 194/401 (48%), Gaps = 35/401 (8%)
Query: 7 NKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPE-KVKFAIGLLPAII------GGQA 59
N+ GE DF + APL+GI A L N++ T+ + + A+ L P + G
Sbjct: 170 NRGGELGELDFRFPVGAPLHGINAFLTTNQLKTYDKARNAVALALSPVVRALVDPDGAMT 229
Query: 60 YVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKH 119
+ D ++ EW +G ++ ++ AL FI+ D +S +C+L + F +
Sbjct: 230 QIRNLDNISFSEWFMSKGGTRTSIQRMWDPVAYALGFIDCDNISARCMLTIFSLFATKTE 289
Query: 120 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-------T 172
S + L G+P L PI ++I GG L ++I + ++ T
Sbjct: 290 ASLLRMLKGSPDVYLSGPIRDYIIEKGGRFHLRWGCREILYEKSANGETYVTGLAMSKAT 349
Query: 173 NGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD-------- 224
++ D Y+ A V +K LP NW+E +F + KLVGVPV+ + + ++
Sbjct: 350 QKQIVKADVYIAACDVPGIKRLLPSNWREWEFFDNIYKLVGVPVVTVQLRYNGWVTELQD 409
Query: 225 ----RKLKNT--YDHLLFSRSSLLSVYADMSLTCKE-YYNPNQ-SMLELVFAPAEEWISC 276
R+L+ D+LL++ + S +AD++L E YY Q S+L+ V P + ++
Sbjct: 410 VERSRQLRQAAGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPL 469
Query: 277 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPV 336
+ EII K++ LFP ++ VVK +S+Y+ P +P RP Q++PV
Sbjct: 470 PNEEIISRVSKQVLALFPSS-----QGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPV 524
Query: 337 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAA 377
+ F+LAG YTKQ Y+ SMEGA LSG+ + I LAA
Sbjct: 525 KNFFLAGSYTKQDYIDSMEGATLSGRQASAFICDAGEELAA 565
>sp|Q9ZTP4|ZDS_MAIZE Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays
GN=ZDS1 PE=2 SV=1
Length = 570
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 194/392 (49%), Gaps = 35/392 (8%)
Query: 7 NKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPE-KVKFAIGLLPAII------GGQA 59
NK G DF + APL+GI A LR N++ + + + A+ L P + G
Sbjct: 152 NKGGTIGELDFRFPVGAPLHGIQAFLRTNQLKVYDKARNAVALALSPVVRALVDPDGALQ 211
Query: 60 YVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKH 119
V D ++ +W +G T ++ + AL FI+ D +S +C+L F +
Sbjct: 212 QVRDLDDISFSDWFMSKGGTRESITRMWDPVRYALGFIDCDNISARCMLTIFTLFATKTE 271
Query: 120 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKI--ELNDDGT--VKNFLLTNGN 175
S + L G+P L PI ++I GG L +++ E + DG VK LLT
Sbjct: 272 ASLLRMLKGSPDVYLSGPIKKYITDRGGRFHLRWGCREVLYEKSPDGETYVKGLLLTKAT 331
Query: 176 ---VIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD-------- 224
+I DAYV A V +K LP W+E F + KL GVPV+ + + ++
Sbjct: 332 SREIIKADAYVAACDVPGIKRLLPSEWREWEMFDNIYKLDGVPVVTVQLRYNGWVTELQD 391
Query: 225 ----RKLKNT--YDHLLFSRSSLLSVYADMSLTC-KEYYNPNQ-SMLELVFAPAEEWISC 276
R+L+ D+LL++ + S ++D++L+ +YY Q S+++ V P + ++
Sbjct: 392 LEKSRQLQRAVGLDNLLYTADADFSCFSDLALSSPADYYIEGQGSLIQAVLTPGDPYMPL 451
Query: 277 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPV 336
+ EII K++ +LFP + + VVK +S+Y+ P +P RP Q++PV
Sbjct: 452 PNEEIISKVQKQVVELFPSSRGLE-----VTWSSVVKIGQSLYREAPGNDPFRPDQKTPV 506
Query: 337 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 368
+ F+L+G YTKQ Y+ SMEGA LSG+ + I
Sbjct: 507 KNFFLSGSYTKQDYIDSMEGATLSGRRTSAYI 538
>sp|Q9SMJ3|ZDS_CAPAN Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum
annuum GN=ZDS PE=1 SV=1
Length = 588
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 200/410 (48%), Gaps = 36/410 (8%)
Query: 7 NKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPE-KVKFAIGLLPAII------GGQA 59
NK GE DF + APL+GI A L N++ T+ + + A+ L P + G
Sbjct: 167 NKGGEIGELDFRFPVGAPLHGINAFLSTNQLKTYDKARNAVALALSPVVRALVDPDGALQ 226
Query: 60 YVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKH 119
+ D ++ +W +G ++ ++ AL FI+ D +S +C+L F +
Sbjct: 227 QIRDLDSVSFSDWFMSKGGTRASIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTE 286
Query: 120 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKI--ELNDDGTVKNFLL-----T 172
S + L G+P L PI ++I GG L +++ E + DG++ L T
Sbjct: 287 ASLLRMLKGSPDVYLSGPIKKYIIDKGGRFHLRWGCREVLYETSSDGSMYVSGLAMSKAT 346
Query: 173 NGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD-------- 224
++ DAYV A V +K +P+ W+E+ +F + KL+GVPV+ + + ++
Sbjct: 347 QKKIVKADAYVAACVVPGIKRLVPQKWRELEFFGNIYKLIGVPVVTVQLRYNGWVTELQD 406
Query: 225 ------RKLKNTYDHLLFSRSSLLSVYADMSLTCKE-YYNPNQ-SMLELVFAPAEEWISC 276
K D+LL++ + S +AD++L E YY Q S+L+ V P + ++
Sbjct: 407 LERSRQSKRATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPL 466
Query: 277 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPV 336
+ EII K++ LFP ++ VVK +S+Y+ P +P RP Q++PV
Sbjct: 467 PNEEIIRRVSKQVLALFPS-----SQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPV 521
Query: 337 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ-DYVLLAARGKGRLAE 385
E F+LAG YTKQ Y+ SMEGA LSG+ + I LLA R K AE
Sbjct: 522 ENFFLAGSYTKQDYIDSMEGATLSGRQASAYICDAGEQLLALRKKIAAAE 571
>sp|P74306|ZDS_SYNY3 Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=crtQ PE=3 SV=1
Length = 489
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 204/400 (51%), Gaps = 37/400 (9%)
Query: 7 NKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAII--------GGQ 58
N+ G DF + AP NG+ A +++ T +K+ +I L + I G
Sbjct: 88 NQGGRIGELDFRFLTGAPFNGLKAFFTTSQLDT-KDKIANSIALATSPIVRGLVDFDGAM 146
Query: 59 AYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEK 118
+ D ++ EW +G + +++ ++ AL FI+ + +S +C+L F
Sbjct: 147 KTIRDLDRISFAEWFLSKGGNEGSLKKMWDPIAYALGFIDTENISARCMLTIFQLFAART 206
Query: 119 HGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIE--LNDDGTVKNFLLTNGNV 176
S + L+G+P E L PI E+++ G + +V++I+ + D T L+ N V
Sbjct: 207 EASVLRMLEGSPQEYLHKPIQEYLEQRGTKFYTRHKVKEIKTKVTDGETRVTGLIINDGV 266
Query: 177 ----IDGDAYVFATPVDILKLQLPENWK-EMAYFKRLEKLVGVPVINIHIWFD------- 224
+ DAYV A V +K LPENW+ + +F ++ L VPV + + FD
Sbjct: 267 ETKTVTADAYVAACDVPGIKNLLPENWRTQWDFFNKIYYLDTVPVATVQLRFDGWVTEMN 326
Query: 225 -----RKLKNTY--DHLLFSRSSLLSVYADMSLTC-KEYYNPNQ-SMLELVFAPAEEWIS 275
++L+ + D+LL++ + S +AD++LT +YY P + S+L+LV P + ++
Sbjct: 327 DPAKRKQLEQAFGLDNLLYTSDAEFSCFADLALTSPADYYRPGEGSLLQLVLTPGDPFMK 386
Query: 276 CSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSP 335
S+ I +K++ LFP +AD + + Y V+K +S+Y+ P + RP Q +P
Sbjct: 387 ESNEAIAYRVLKQVKALFPS--AADLN---MTWYSVIKLAQSLYREAPGMDLFRPSQATP 441
Query: 336 VEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 375
+ F+LAG YT+Q Y+ SMEGA LSG+ AQAI+ + L
Sbjct: 442 IANFFLAGSYTQQDYIDSMEGATLSGRQAAQAILANQARL 481
>sp|Q9R6X4|ZDS_NOSS1 Zeta-carotene desaturase OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=crtQ PE=3 SV=2
Length = 479
Score = 171 bits (434), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 198/395 (50%), Gaps = 36/395 (9%)
Query: 7 NKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAII--------GGQ 58
NK G DF AP NG+ A ++ L+ +K++ AI L + I G
Sbjct: 88 NKGGRTGALDFRFFTGAPFNGLKAFFTTSQ-LSLQDKLQNAIALGTSPIVRGLVDFEGAM 146
Query: 59 AYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEK 118
+ D ++ +W R G + ++ ++ AL FI+ + +S +C+L F
Sbjct: 147 KTIRNLDKISFADWFRSHGGSNGSIKRMWNPIAYALGFIDCENISARCMLTIFQFFAVRS 206
Query: 119 HGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKI---ELNDDGTVKNFLLTNGN 175
S + L+G+P E L PI+ ++++ G +V +V++I E V ++ G+
Sbjct: 207 EASVLRMLEGSPDEYLHQPILRYLEARGTKVYTRRQVREIKYAEAEGQTRVTGIVVAKGD 266
Query: 176 VID---GDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD-------- 224
++ DAYV A + ++ LP+ W++ + F + KL VPV + + FD
Sbjct: 267 EVEEITADAYVCACDIPGIQRVLPQEWRKWSEFDNIYKLDAVPVATVQMRFDGWVTELQD 326
Query: 225 ----RKLKNT--YDHLLFSRSSLLSVYADMSLTC-KEYYNPNQ-SMLELVFAPAEEWISC 276
++LK D+LL++ + S +AD++LT +YY Q S+L+LV P + +I
Sbjct: 327 ENKRKQLKEAAGLDNLLYTADADFSCFADLALTSPSDYYRQGQGSLLQLVLTPGDPFIKE 386
Query: 277 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPV 336
S+ I +K++ +LFP + + Y VVK +S+Y+ P + RP Q++P+
Sbjct: 387 SNEAIAQHVLKQVYELFPSS-----RELNMTWYSVVKLAQSLYREAPGMDVYRPNQKTPI 441
Query: 337 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 371
F+LAG YT+Q Y+ SMEGA +SG+ A+ I+ +
Sbjct: 442 ANFFLAGSYTQQDYIDSMEGATVSGRRAAKVILDN 476
>sp|O49901|ZDS_NARPS Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus
pseudonarcissus GN=ZDS1 PE=2 SV=1
Length = 574
Score = 169 bits (427), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 200/402 (49%), Gaps = 37/402 (9%)
Query: 7 NKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGL-----LPAII---GGQ 58
N+ GE DF + APL+GI A L N++ + +K + A+ L + A+I G
Sbjct: 152 NRGGEIGELDFRLPMGAPLHGIRAFLTTNQLKPY-DKARNAVALALSPVVRALIDPNGAM 210
Query: 59 AYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEK 118
+ D ++ +W +G ++ ++ AL FI+ D +S +C+L + F +
Sbjct: 211 QDIRNLDNISFSDWFLSKGGTRMSIQRMWDPVAYALGFIDCDNISARCMLTIFSLFATKT 270
Query: 119 HGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKI---EL-NDDGTVKNFLL--- 171
S + L G+P L PI ++I GG L ++I EL N D + +
Sbjct: 271 EASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDELSNGDTYITGIAMSKA 330
Query: 172 TNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD------- 224
TN ++ D YV A V +K +P W+E F + KLVGVPV+ + + ++
Sbjct: 331 TNKKLVKADVYVAACDVPGIKRLIPSEWREWDLFDNIYKLVGVPVVTVQLRYNGWVTEMQ 390
Query: 225 -----RKLKNTY--DHLLFSRSSLLSVYADMSLTCKE-YYNPNQ-SMLELVFAPAEEWIS 275
R+L+ D+LL++ + S ++D++L+ E YY Q S+++ V P + ++
Sbjct: 391 DLEKSRQLRAAVGLDNLLYTPDADFSCFSDLALSSPEDYYIEGQGSLIQAVLTPGDPYMP 450
Query: 276 CSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSP 335
+ II+ K++ LFP +++ VVK +S+Y+ P +P RP Q++P
Sbjct: 451 LPNDAIIERVRKQVLDLFPSS-----QGLEVLWSSVVKIGQSLYREGPGKDPFRPDQKTP 505
Query: 336 VEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAA 377
V+ F+LAG YTKQ Y+ SMEGA LSG+ A I LAA
Sbjct: 506 VKNFFLAGSYTKQDYIDSMEGATLSGRQAAAYICSAGEDLAA 547
>sp|Q38893|ZDS_ARATH Zeta-carotene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=ZDS1 PE=1 SV=3
Length = 558
Score = 168 bits (425), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 199/414 (48%), Gaps = 35/414 (8%)
Query: 7 NKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPE-KVKFAIGLLPAII------GGQA 59
NK G DF + AP++GI A L N++ + + + A+ L P + G
Sbjct: 144 NKDGTIGELDFRFPVGAPIHGIRAFLVTNQLKPYDKLRNSLALALSPVVKALVDPDGAMR 203
Query: 60 YVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKH 119
+ D ++ +W +G ++ ++ AL FI+ D +S +C+L + F +
Sbjct: 204 DIRNLDSISFSDWFLSKGGTRASIQRMWDPVAYALGFIDCDNMSARCMLTIFSLFATKTE 263
Query: 120 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-------T 172
S + L G+P L PI ++I GG + L ++I + + ++ T
Sbjct: 264 ASLLRMLKGSPDVYLSGPIKQYITDRGGRIHLRWGCREILYDKSADGETYVTGLAISKAT 323
Query: 173 NGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD-------- 224
N ++ D YV A V +K LP+ W+E +F + +L GVPV+ + + ++
Sbjct: 324 NKKIVKADVYVAACDVPGIKRLLPKEWRESRFFNDIYELEGVPVVTVQLRYNGWVTELQD 383
Query: 225 ----RKLKNTY--DHLLFSRSSLLSVYADMSLTC-KEYYNPNQ-SMLELVFAPAEEWISC 276
R+LK D+LL++ + S +AD++L +YY Q ++L+ V P + ++
Sbjct: 384 IELARQLKRAVGLDNLLYTPDADFSCFADLALASPADYYIEGQGTLLQCVLTPGDPYMRM 443
Query: 277 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPV 336
+ +II+ ++ +LFP ++ VVK +S+Y+ P +P RP Q++P+
Sbjct: 444 PNDKIIEKVAMQVTELFPS-----SRGLEVTWSSVVKIAQSLYREAPGKDPFRPDQKTPI 498
Query: 337 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASMCP 390
+ F+LAG YTKQ Y+ SMEGA LSG+ + I LA K + A+ P
Sbjct: 499 KNFFLAGSYTKQDYIDSMEGATLSGRQASSYICDAGEELAELNKKLSSSATAVP 552
>sp|Q9SKX5|PAO2_ARATH Probable polyamine oxidase 2 OS=Arabidopsis thaliana GN=PAO2 PE=2
SV=1
Length = 490
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 48/244 (19%)
Query: 146 GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKL-------QLPEN 198
G ++R+ RV KI +G NG DA V A P+ +LK +LPE
Sbjct: 237 GLDIRVGHRVTKIVRRYNGV--KVTTENGQTFVADAAVIAVPLGVLKSGTIKFEPKLPE- 293
Query: 199 WKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNP 258
WK+ A + ++ + + K+ ++ + + + L V A+ S C + N
Sbjct: 294 WKQEA------------INDLGVGIENKIILHFEKVFWPKVEFLGVVAETSYGCSYFLNL 341
Query: 259 NQSMLE--LVFAPAEEWIS----CSDSEIIDATMKELAKLFPDEI----------SADQS 302
+++ LV+ PA + SD + + +L ++ PD + +D +
Sbjct: 342 HKATGHPVLVYMPAGQLAKDIEKMSDEAAANFAVLQLQRILPDALPPVQYLVSRWGSDVN 401
Query: 303 KAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGK 362
Y +V P +Y+ + R PV+ + AG+ T + S+ GA +G
Sbjct: 402 SMGSYSYDIVGKPHDLYERL----------RVPVDNLFFAGEATSSSFPGSVHGAYSTGL 451
Query: 363 LCAQ 366
+ A+
Sbjct: 452 MAAE 455
>sp|Q8H191|PAO4_ARATH Probable polyamine oxidase 4 OS=Arabidopsis thaliana GN=PAO4 PE=1
SV=1
Length = 497
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 91/235 (38%), Gaps = 33/235 (14%)
Query: 148 EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKR 207
++RLN RV K+ + V + N + DA + P+ +LK L + E+ +K
Sbjct: 240 DIRLNHRVTKVVRTSNNKVIVAVEGGTNFV-ADAVIITVPIGVLKANLIQFEPELPQWKT 298
Query: 208 LEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLE--L 265
+ G+ V N + K+ +D + L + A S C + N +++ L
Sbjct: 299 -SAISGLGVGN-----ENKIALRFDRAFWPNVEFLGMVAPTSYACGYFLNLHKATGHPVL 352
Query: 266 VFAPA----EEWISCSDSEIIDATMKELAKLFPD----------EISADQSKAKIVKYHV 311
V+ A ++ SD + M +L K+FPD D + Y V
Sbjct: 353 VYMAAGNLAQDLEKLSDEATANFVMLQLKKMFPDAPDPAQYLVTRWGTDPNTLGCYAYDV 412
Query: 312 VKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQ 366
V P +Y P PV+ + G+ ++ S GA L+G +Q
Sbjct: 413 VGMPEDLY----------PRLGEPVDNIFFGGEAVNVEHQGSAHGAFLAGVSASQ 457
>sp|P55349|Y4AB_RHISN Uncharacterized protein y4aB OS=Rhizobium sp. (strain NGR234)
GN=NGR_a00450 PE=4 SV=1
Length = 417
Score = 39.3 bits (90), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 96/237 (40%), Gaps = 38/237 (16%)
Query: 134 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDG--DAYVFATPVDIL 191
L P V+ ++ G VRL+ +++K+ + + + + + G DA + A P
Sbjct: 205 LVEPAVKLLERRGATVRLSHKLRKLAKSAE-IISELDFGDDKIAVGPDDAVILAVPPRAA 263
Query: 192 KLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLT 251
LP K F+ V+N H FD + +L V
Sbjct: 264 ATLLP-GLKTPTEFR--------AVVNAHFRFDPPV---------GADPILGVVG----- 300
Query: 252 CKEYYNPNQSMLELVFA-PAEEWISCSDSE-IIDATMKELAK-LFPDEISADQSKAKIVK 308
++E +FA P ++ S+ + ++D +E+ + ++ D A ++
Sbjct: 301 ---------GLVEWLFAYPQRLSVTISNGDRLLDIPREEVVRVIWRDVCEAGGISGELPP 351
Query: 309 YHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCA 365
+ +V R+ ++ P RP + + +LAGD+T A++EG+V SG A
Sbjct: 352 WQIVCERRATFQATPEQNALRPGPVTGCKNLFLAGDWTATGLPATIEGSVRSGNRAA 408
>sp|O60341|KDM1A_HUMAN Lysine-specific histone demethylase 1A OS=Homo sapiens GN=KDM1A
PE=1 SV=2
Length = 852
Score = 35.4 bits (80), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 47/272 (17%)
Query: 135 CLPIVEHIQSLGGEVRLNSRVQKIELNDDG----TVKNFLLTNGNVIDGDAYVFATPVDI 190
C+P+ + G +++LN+ V+++ G V + + DA + P+ +
Sbjct: 573 CVPVA---LAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGV 629
Query: 191 LKLQ---------LPENWKEMAY----FKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFS 237
LK Q LPE WK A F L K+V + FDR + +L
Sbjct: 630 LKQQPPAVQFVPPLPE-WKTSAVQRMGFGNLNKVV--------LCFDRVFWDPSVNLFGH 680
Query: 238 RSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWI-SCSDSEIIDATMKELAKLFPDE 296
S + ++ L Y P +L LV A + + SD I+ + L +F
Sbjct: 681 VGSTTASRGELFLFWNLYKAP--ILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSS 738
Query: 297 ISADQSKAKIVKYHVVKTPRSVYKTIPNCE---------------PCRPLQRSPVEGFYL 341
+ + ++ R Y + P P P+ +
Sbjct: 739 AVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFF 798
Query: 342 AGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 373
AG++T + Y A++ GA+LSG A I ++
Sbjct: 799 AGEHTIRNYPATVHGALLSGLREAGRIADQFL 830
>sp|Q6ZQ88|KDM1A_MOUSE Lysine-specific histone demethylase 1A OS=Mus musculus GN=Kdm1a
PE=1 SV=2
Length = 853
Score = 35.0 bits (79), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 47/272 (17%)
Query: 135 CLPIVEHIQSLGGEVRLNSRVQKIELNDDG----TVKNFLLTNGNVIDGDAYVFATPVDI 190
C+P+ + G +++LN+ V+++ G V + + DA + P+ +
Sbjct: 574 CVPVA---LAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGV 630
Query: 191 LKLQ---------LPENWKEMAY----FKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFS 237
LK Q LPE WK A F L K+V + FDR + +L
Sbjct: 631 LKQQPPAVQFVPPLPE-WKTSAVQRMGFGNLNKVV--------LCFDRVFWDPSVNLFGH 681
Query: 238 RSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWI-SCSDSEIIDATMKELAKLFPDE 296
S + ++ L Y P +L LV A + + SD I+ + L +F
Sbjct: 682 VGSTTASRGELFLFWNLYKAP--ILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSS 739
Query: 297 ISADQSKAKIVKYHVVKTPRSVYKTIPNCE---------------PCRPLQRSPVEGFYL 341
+ + ++ R Y + P P P+ +
Sbjct: 740 AVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFF 799
Query: 342 AGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 373
AG++T + Y A++ GA+LSG A I ++
Sbjct: 800 AGEHTIRNYPATVHGALLSGLREAGRIADQFL 831
>sp|B8GJK8|EF2_METPE Elongation factor 2 OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=fusA PE=3 SV=1
Length = 730
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 58 QAYVEAQDGLTVQEWMRKQG--VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL 115
Q ++E +D L W + + + D TT +FI M+K + ++N +M+ IL L+ L
Sbjct: 513 QTWIERRDILVANGWEKDEAKNIKDISTTNIFIDMTKGVQYLNE---TMELILEGLHEAL 569
Query: 116 Q 116
Q
Sbjct: 570 Q 570
>sp|P76150|YNEK_ECOLI Uncharacterized protein YneK OS=Escherichia coli (strain K12)
GN=yneK PE=4 SV=1
Length = 371
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 240 SLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISA 299
+L +A+M L ++ NPN+S L V PA S SD +II + KLF
Sbjct: 282 NLFLFFANMLLHYHQFMNPNESDLNDVLMPA----SLSDDKIIKHMARRTLKLF----VK 333
Query: 300 DQSKAKIVKYHVVKT-PRS 317
+++ K+ +VK PRS
Sbjct: 334 NETPPKVTHEDLVKNRPRS 352
>sp|B2DBE8|GGS1_PHOAM Geranylgeranyl pyrophosphate synthase A OS=Phomopsis amygdali
GN=GGS-A PE=1 SV=1
Length = 389
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 7 NKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQA----YVE 62
++P S F + + + GI+ +LR + + P +K I L +++ GQ+ +
Sbjct: 149 SRPSTHSIFGIDQTVNSSTCGIVEVLRRSSEMQNPAFLKIVIEELRSLLIGQSLDLLWTH 208
Query: 63 AQDGLTVQEWMR----KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ 116
+V+E+++ K G R+ +++ IA S++ N +NP +L ++ L R+ Q
Sbjct: 209 QISTPSVEEYLQMVDGKTGGLFRMASKLMIAQSESSN-MNPTDL--DALMTLLGRYFQ 263
>sp|A7HDA9|PURA_ANADF Adenylosuccinate synthetase OS=Anaeromyxobacter sp. (strain
Fw109-5) GN=purA PE=3 SV=1
Length = 431
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 5/39 (12%)
Query: 192 KLQLPENWKEM-----AYFKRLEKLVGVPVINIHIWFDR 225
KL+ +W ++ AY KR+E+LVGVPV+ + + DR
Sbjct: 381 KLEDLRSWDDLPPRARAYVKRVEQLVGVPVVGLSVGADR 419
>sp|Q9XWP6|LSD1_CAEEL Probable lysine-specific histone demethylase 1 OS=Caenorhabditis
elegans GN=spr-5 PE=1 SV=1
Length = 770
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 18/129 (13%)
Query: 258 PNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYH------- 310
P +L E + D II M L K F + A I ++H
Sbjct: 558 PGSKVLCTYIVGEEAMLELPDDVIIQNAMINLQKAFGNNCPRAPISAHITRWHDDELAFG 617
Query: 311 -----VVKTPRSVYKTIPNCEPCRPLQRSP-VEGFYLAGDYTKQKYLASMEGAVLSGKLC 364
++T + + + PL+ S + Y AG++T Y ++++GA +SG
Sbjct: 618 SGAFMSLRTETTSFDDV-----MEPLKTSDGMSRVYFAGEHTCSSYTSTIQGAWMSGARA 672
Query: 365 AQAIVQDYV 373
A I D++
Sbjct: 673 AADISNDHI 681
>sp|C0LGF5|Y1341_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g34110
OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2
Length = 1072
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 18/69 (26%)
Query: 50 LLPAIIGGQAYVEAQ--DGLTVQEWMRK----------------QGVPDRVTTEVFIAMS 91
+L I+ G++ VE Q DGL + EW++K QG+PD++ E+ +
Sbjct: 967 VLLEILSGRSAVEPQIGDGLHIVEWVKKKMGTFEPALSVLDVKLQGLPDQIVQEMLQTLG 1026
Query: 92 KALNFINPD 100
A+ +NP
Sbjct: 1027 IAMFCVNPS 1035
>sp|A3AF13|UBP26_ORYSJ Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
japonica GN=UBP26 PE=2 SV=2
Length = 1079
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 97 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNP 130
+ PD L M +L L R + H SKMAF+D P
Sbjct: 137 LEPDILKMHPVLDQLARLFAQLHSSKMAFIDSAP 170
>sp|A2XDG4|UBP26_ORYSI Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
indica GN=UBP26 PE=2 SV=1
Length = 1079
Score = 33.1 bits (74), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 97 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNP 130
+ PD L M +L L R + H SKMAF+D P
Sbjct: 137 LEPDILKMHPVLDQLARLFAQLHSSKMAFIDSAP 170
>sp|P22871|CRTI_ESCVU Phytoene desaturase (lycopene-forming) OS=Escherichia vulneris
GN=crtI PE=3 SV=1
Length = 492
Score = 32.7 bits (73), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 138 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDA 181
+V+ LGGE+ LN+RV+++ + D+ V L +G + D DA
Sbjct: 227 MVKLFTDLGGEIELNARVEELVVADN-RVSQVRLADGRIFDTDA 269
>sp|B1JQ63|CAPP_YERPY Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis
serotype O:3 (strain YPIII) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 248 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 300
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|Q66G74|CAPP_YERPS Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis
serotype I (strain IP32953) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 248 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 300
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|B2JZD9|CAPP_YERPB Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis
serotype IB (strain PB1/+) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 248 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 300
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|A7FCZ7|CAPP_YERP3 Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis
serotype O:1b (strain IP 31758) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 248 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 300
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|A4TRH7|CAPP_YERPP Phosphoenolpyruvate carboxylase OS=Yersinia pestis (strain
Pestoides F) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 248 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 300
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|Q1CNQ7|CAPP_YERPN Phosphoenolpyruvate carboxylase OS=Yersinia pestis bv. Antiqua
(strain Nepal516) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 248 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 300
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|Q8ZA84|CAPP_YERPE Phosphoenolpyruvate carboxylase OS=Yersinia pestis GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 248 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 300
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|Q1CBV8|CAPP_YERPA Phosphoenolpyruvate carboxylase OS=Yersinia pestis bv. Antiqua
(strain Antiqua) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 248 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 300
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|C6DI86|CAPP_PECCP Phosphoenolpyruvate carboxylase OS=Pectobacterium carotovorum
subsp. carotovorum (strain PC1) GN=ppc PE=3 SV=1
Length = 879
Score = 32.3 bits (72), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 252 CKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 300
C++ +++ MLE+VFA A+ W++ D ++D + L K D+++AD
Sbjct: 754 CRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDEKLWPLGKQLRDQLAAD 805
>sp|Q05627|Y202_CLOB8 Uncharacterized protein Cbei_0202 OS=Clostridium beijerinckii
(strain ATCC 51743 / NCIMB 8052) GN=Cbei_0202 PE=4 SV=2
Length = 533
Score = 32.0 bits (71), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 138 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFA 185
I E I+ LGGEV NS+++KI DG +++ ++ NG I +A V A
Sbjct: 213 IREEIKRLGGEVNFNSKLEKITYK-DGKLES-IVVNGKNITCEALVLA 258
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,900,814
Number of Sequences: 539616
Number of extensions: 6352201
Number of successful extensions: 15348
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 15268
Number of HSP's gapped (non-prelim): 50
length of query: 390
length of database: 191,569,459
effective HSP length: 119
effective length of query: 271
effective length of database: 127,355,155
effective search space: 34513247005
effective search space used: 34513247005
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)