Query 016397
Match_columns 390
No_of_seqs 216 out of 2425
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 12:54:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016397.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016397hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 100.0 1.4E-31 4.8E-36 257.8 31.2 309 37-370 112-425 (425)
2 3nrn_A Uncharacterized protein 100.0 5.3E-28 1.8E-32 232.6 29.9 300 38-368 103-403 (421)
3 3i6d_A Protoporphyrinogen oxid 100.0 9.6E-30 3.3E-34 248.1 16.3 315 30-372 120-468 (470)
4 2ivd_A PPO, PPOX, protoporphyr 100.0 1.1E-28 3.7E-33 241.3 23.5 323 22-373 112-474 (478)
5 1s3e_A Amine oxidase [flavin-c 100.0 8.6E-29 2.9E-33 244.5 21.6 293 64-374 143-456 (520)
6 3lov_A Protoporphyrinogen oxid 100.0 2.5E-29 8.5E-34 245.7 14.9 322 24-375 110-468 (475)
7 1sez_A Protoporphyrinogen oxid 100.0 2.4E-29 8.3E-34 247.6 14.6 330 21-374 107-495 (504)
8 3nks_A Protoporphyrinogen oxid 100.0 3.7E-28 1.2E-32 237.5 18.9 291 63-371 140-473 (477)
9 2vvm_A Monoamine oxidase N; FA 100.0 2.4E-28 8.4E-33 239.9 17.5 292 62-373 181-486 (495)
10 2yg5_A Putrescine oxidase; oxi 100.0 1.8E-28 6.3E-33 238.0 15.5 290 63-373 142-452 (453)
11 4dgk_A Phytoene dehydrogenase; 99.9 1.4E-25 4.8E-30 220.5 24.2 289 67-373 164-492 (501)
12 4dsg_A UDP-galactopyranose mut 99.9 3.6E-26 1.2E-30 223.1 10.9 312 37-369 111-452 (484)
13 4gde_A UDP-galactopyranose mut 99.9 1.2E-25 4E-30 221.6 8.9 313 38-370 116-477 (513)
14 1b37_A Protein (polyamine oxid 99.9 2.1E-24 7.3E-29 210.5 15.4 297 63-373 134-459 (472)
15 3qj4_A Renalase; FAD/NAD(P)-bi 99.9 9.8E-23 3.3E-27 190.4 20.4 227 124-371 105-341 (342)
16 3k7m_X 6-hydroxy-L-nicotine ox 99.9 2.4E-21 8.3E-26 186.6 23.6 276 62-371 137-425 (431)
17 2iid_A L-amino-acid oxidase; f 99.9 9.3E-22 3.2E-26 193.1 20.2 291 62-373 178-485 (498)
18 2jae_A L-amino acid oxidase; o 99.9 1.1E-21 3.7E-26 192.2 15.3 236 121-374 229-487 (489)
19 2z3y_A Lysine-specific histone 99.9 6.7E-21 2.3E-25 192.6 18.3 227 123-373 393-659 (662)
20 2xag_A Lysine-specific histone 99.9 1E-20 3.5E-25 194.0 17.9 229 123-374 564-831 (852)
21 1rsg_A FMS1 protein; FAD bindi 99.8 9.6E-21 3.3E-25 186.6 15.3 295 64-374 136-509 (516)
22 4gut_A Lysine-specific histone 99.8 5.1E-20 1.7E-24 187.7 12.8 227 122-370 525-775 (776)
23 3ayj_A Pro-enzyme of L-phenyla 99.8 4.4E-20 1.5E-24 184.6 5.0 304 62-375 279-682 (721)
24 1yvv_A Amine oxidase, flavin-c 99.7 2.4E-16 8.2E-21 146.4 20.2 221 127-374 106-329 (336)
25 2b9w_A Putative aminooxidase; 99.7 1.1E-16 3.8E-21 153.7 13.8 272 64-369 140-423 (424)
26 3p1w_A Rabgdi protein; GDI RAB 99.6 4.3E-14 1.5E-18 135.8 16.5 164 21-188 141-312 (475)
27 1i8t_A UDP-galactopyranose mut 99.5 2.1E-14 7.1E-19 135.0 8.8 142 64-237 126-270 (367)
28 1v0j_A UDP-galactopyranose mut 99.5 9E-16 3.1E-20 146.0 -1.1 238 64-371 136-386 (399)
29 2bcg_G Secretory pathway GDP d 99.5 2.2E-11 7.4E-16 117.7 27.0 285 30-370 135-439 (453)
30 2bi7_A UDP-galactopyranose mut 99.5 9.2E-14 3.1E-18 131.3 8.8 231 64-372 130-370 (384)
31 1vg0_A RAB proteins geranylger 99.5 1.6E-11 5.4E-16 121.5 24.6 223 22-267 270-507 (650)
32 1d5t_A Guanine nucleotide diss 99.4 4.8E-11 1.7E-15 114.5 26.3 283 30-370 127-428 (433)
33 3hdq_A UDP-galactopyranose mut 99.4 7E-13 2.4E-17 124.9 10.2 231 62-370 152-389 (397)
34 2e1m_C L-glutamate oxidase; L- 98.9 1.1E-10 3.6E-15 97.9 -0.2 98 270-374 48-154 (181)
35 2e1m_A L-glutamate oxidase; L- 98.0 1.3E-05 4.4E-10 74.7 9.0 112 62-186 257-369 (376)
36 2gag_B Heterotetrameric sarcos 98.0 0.00036 1.2E-08 65.6 17.8 199 133-371 175-375 (405)
37 3dme_A Conserved exported prot 97.8 0.00024 8.3E-09 65.7 13.8 58 132-190 150-209 (369)
38 2e1m_B L-glutamate oxidase; L- 97.8 2.8E-05 9.6E-10 60.4 5.3 106 175-296 4-111 (130)
39 1y56_B Sarcosine oxidase; dehy 97.7 0.0023 7.9E-08 59.5 18.1 204 132-372 149-356 (382)
40 1ryi_A Glycine oxidase; flavop 97.7 0.0016 5.6E-08 60.5 17.1 208 123-371 153-362 (382)
41 3kkj_A Amine oxidase, flavin-c 97.6 0.0054 1.8E-07 53.4 18.7 87 275-374 243-329 (336)
42 3cgv_A Geranylgeranyl reductas 97.5 0.0026 8.9E-08 59.4 16.1 56 133-189 103-161 (397)
43 3atr_A Conserved archaeal prot 97.5 0.0026 8.7E-08 60.9 15.8 62 133-195 101-168 (453)
44 3ps9_A TRNA 5-methylaminomethy 97.5 0.007 2.4E-07 61.0 19.3 56 132-189 417-472 (676)
45 2gmh_A Electron transfer flavo 97.5 0.0079 2.7E-07 59.5 19.2 57 133-189 145-216 (584)
46 3pvc_A TRNA 5-methylaminomethy 97.4 0.011 3.7E-07 59.8 19.7 56 132-189 412-468 (689)
47 2qa2_A CABE, polyketide oxygen 97.3 0.023 7.7E-07 55.1 19.7 61 133-195 108-172 (499)
48 3ihg_A RDME; flavoenzyme, anth 97.2 0.01 3.5E-07 58.0 16.6 62 133-195 121-189 (535)
49 3nix_A Flavoprotein/dehydrogen 97.2 0.0029 9.8E-08 59.7 12.1 63 133-195 107-172 (421)
50 3dje_A Fructosyl amine: oxygen 97.2 0.00076 2.6E-08 64.2 7.8 58 132-190 161-221 (438)
51 2qa1_A PGAE, polyketide oxygen 97.2 0.018 6.3E-07 55.7 17.6 61 133-195 107-171 (500)
52 1k0i_A P-hydroxybenzoate hydro 97.0 0.013 4.4E-07 54.7 14.8 63 133-196 104-170 (394)
53 4a9w_A Monooxygenase; baeyer-v 97.0 0.016 5.6E-07 52.8 14.6 56 133-190 77-132 (357)
54 3e1t_A Halogenase; flavoprotei 96.9 0.016 5.4E-07 56.3 14.7 62 133-195 112-178 (512)
55 3oz2_A Digeranylgeranylglycero 96.9 0.063 2.2E-06 49.6 18.1 60 134-194 104-167 (397)
56 3rp8_A Flavoprotein monooxygen 96.8 0.0058 2E-07 57.5 10.1 53 133-189 128-180 (407)
57 3fmw_A Oxygenase; mithramycin, 96.8 0.012 4E-07 58.1 12.3 61 133-195 149-213 (570)
58 3lxd_A FAD-dependent pyridine 96.7 0.0038 1.3E-07 59.0 8.0 56 132-188 194-249 (415)
59 3nyc_A D-arginine dehydrogenas 96.6 0.0023 7.7E-08 59.4 6.0 56 132-190 154-209 (381)
60 2i0z_A NAD(FAD)-utilizing dehy 96.6 0.0037 1.3E-07 59.7 7.5 66 124-190 126-191 (447)
61 3nlc_A Uncharacterized protein 96.6 0.0044 1.5E-07 60.6 7.8 58 132-190 220-277 (549)
62 3fg2_P Putative rubredoxin red 96.6 0.0045 1.5E-07 58.2 7.7 56 132-188 184-239 (404)
63 2dkh_A 3-hydroxybenzoate hydro 96.5 0.17 5.7E-06 50.6 19.0 63 133-196 142-218 (639)
64 4at0_A 3-ketosteroid-delta4-5a 96.4 0.0051 1.7E-07 59.8 7.3 57 133-189 203-263 (510)
65 1y0p_A Fumarate reductase flav 96.4 0.008 2.7E-07 59.3 8.2 57 132-188 255-315 (571)
66 1d4d_A Flavocytochrome C fumar 96.1 0.012 4.1E-07 58.1 8.1 57 132-188 255-315 (572)
67 1qo8_A Flavocytochrome C3 fuma 96.1 0.0097 3.3E-07 58.6 7.3 58 132-189 250-311 (566)
68 3axb_A Putative oxidoreductase 96.1 0.0081 2.8E-07 57.2 6.4 57 133-190 182-254 (448)
69 3v76_A Flavoprotein; structura 96.0 0.0078 2.7E-07 56.9 6.1 62 125-190 126-187 (417)
70 2uzz_A N-methyl-L-tryptophan o 96.0 0.012 3.9E-07 54.5 7.1 60 133-196 150-209 (372)
71 1q1r_A Putidaredoxin reductase 95.9 0.019 6.6E-07 54.4 8.3 56 133-188 192-248 (431)
72 2wpf_A Trypanothione reductase 95.8 0.02 6.7E-07 55.4 8.0 55 133-188 236-290 (495)
73 1fec_A Trypanothione reductase 95.8 0.018 6.3E-07 55.6 7.8 55 133-188 232-286 (490)
74 1mo9_A ORF3; nucleotide bindin 95.8 0.018 6.1E-07 56.1 7.7 56 133-188 256-314 (523)
75 3ef6_A Toluene 1,2-dioxygenase 95.8 0.014 4.7E-07 55.0 6.6 55 133-189 186-240 (410)
76 2e4g_A Tryptophan halogenase; 95.8 0.021 7.1E-07 56.0 8.0 57 133-190 195-252 (550)
77 2hqm_A GR, grase, glutathione 95.8 0.02 6.8E-07 55.1 7.7 56 133-188 227-283 (479)
78 2gf3_A MSOX, monomeric sarcosi 95.7 0.016 5.6E-07 53.8 6.8 55 133-190 151-205 (389)
79 1pj5_A N,N-dimethylglycine oxi 95.7 0.016 5.4E-07 59.9 7.2 56 133-190 152-207 (830)
80 3iwa_A FAD-dependent pyridine 95.7 0.025 8.5E-07 54.3 8.0 55 132-188 202-256 (472)
81 2ywl_A Thioredoxin reductase r 95.7 0.02 6.9E-07 46.9 6.4 54 132-189 56-109 (180)
82 2weu_A Tryptophan 5-halogenase 95.7 0.026 8.9E-07 54.7 8.2 57 133-190 174-230 (511)
83 1ges_A Glutathione reductase; 95.6 0.025 8.6E-07 53.9 7.8 55 133-188 209-263 (450)
84 4dna_A Probable glutathione re 95.6 0.025 8.4E-07 54.2 7.5 55 132-188 211-266 (463)
85 3o0h_A Glutathione reductase; 95.6 0.026 9E-07 54.3 7.7 54 133-188 233-286 (484)
86 3da1_A Glycerol-3-phosphate de 95.6 0.017 5.8E-07 56.8 6.4 58 132-190 170-232 (561)
87 2oln_A NIKD protein; flavoprot 95.5 0.021 7.2E-07 53.3 6.5 54 133-189 154-207 (397)
88 1xdi_A RV3303C-LPDA; reductase 95.5 0.032 1.1E-06 53.9 7.9 55 133-189 224-278 (499)
89 2cul_A Glucose-inhibited divis 95.4 0.024 8.1E-07 48.8 6.1 56 132-189 68-124 (232)
90 2v3a_A Rubredoxin reductase; a 95.3 0.024 8.3E-07 52.7 6.4 54 133-188 188-241 (384)
91 1onf_A GR, grase, glutathione 95.3 0.04 1.4E-06 53.3 8.1 55 133-188 218-273 (500)
92 2x3n_A Probable FAD-dependent 95.3 0.026 9E-07 52.7 6.5 63 133-196 108-173 (399)
93 1trb_A Thioredoxin reductase; 95.2 0.048 1.7E-06 49.0 8.0 55 133-188 185-245 (320)
94 2wdq_A Succinate dehydrogenase 95.2 0.039 1.3E-06 54.5 7.9 58 132-189 143-205 (588)
95 2cdu_A NADPH oxidase; flavoenz 95.2 0.033 1.1E-06 53.1 6.9 56 132-189 191-246 (452)
96 2aqj_A Tryptophan halogenase, 95.1 0.047 1.6E-06 53.3 7.8 58 132-190 165-222 (538)
97 1m6i_A Programmed cell death p 95.1 0.038 1.3E-06 53.4 7.0 54 133-188 227-280 (493)
98 2gqf_A Hypothetical protein HI 95.0 0.036 1.2E-06 52.0 6.5 63 125-190 103-168 (401)
99 3oc4_A Oxidoreductase, pyridin 94.9 0.049 1.7E-06 51.9 7.4 55 132-189 189-243 (452)
100 2rgh_A Alpha-glycerophosphate 94.9 0.046 1.6E-06 53.9 7.2 57 133-190 189-250 (571)
101 2yqu_A 2-oxoglutarate dehydrog 94.8 0.042 1.5E-06 52.4 6.6 56 132-189 208-263 (455)
102 2pyx_A Tryptophan halogenase; 94.8 0.072 2.4E-06 51.9 8.3 57 133-190 176-233 (526)
103 2r9z_A Glutathione amide reduc 94.5 0.059 2E-06 51.5 6.8 54 133-188 208-262 (463)
104 2qcu_A Aerobic glycerol-3-phos 94.3 0.081 2.8E-06 51.1 7.3 57 132-190 149-210 (501)
105 3dgh_A TRXR-1, thioredoxin red 94.2 0.083 2.8E-06 50.8 7.0 56 132-188 227-287 (483)
106 3ab1_A Ferredoxin--NADP reduct 94.2 0.1 3.6E-06 47.7 7.5 56 133-189 75-130 (360)
107 2gqw_A Ferredoxin reductase; f 94.1 0.1 3.6E-06 48.9 7.4 50 133-188 188-237 (408)
108 3alj_A 2-methyl-3-hydroxypyrid 94.1 0.098 3.3E-06 48.4 7.1 58 133-195 108-166 (379)
109 3itj_A Thioredoxin reductase 1 94.1 0.11 3.8E-06 46.9 7.3 53 135-188 211-269 (338)
110 3g3e_A D-amino-acid oxidase; F 94.0 0.22 7.5E-06 45.4 9.3 191 132-374 142-336 (351)
111 2zxi_A TRNA uridine 5-carboxym 94.0 0.099 3.4E-06 51.7 7.1 56 133-190 124-180 (637)
112 3ntd_A FAD-dependent pyridine 93.9 0.11 3.9E-06 50.8 7.5 56 132-188 192-265 (565)
113 2bs2_A Quinol-fumarate reducta 93.8 0.11 3.6E-06 52.1 7.2 57 132-189 158-219 (660)
114 3c4n_A Uncharacterized protein 93.7 0.032 1.1E-06 52.3 3.1 55 133-190 173-236 (405)
115 1zmd_A Dihydrolipoyl dehydroge 93.7 0.14 4.8E-06 49.0 7.7 57 132-189 220-281 (474)
116 1n4w_A CHOD, cholesterol oxida 93.7 0.1 3.5E-06 50.5 6.7 61 134-194 223-292 (504)
117 1rp0_A ARA6, thiazole biosynth 93.6 0.12 4.1E-06 45.8 6.5 56 133-189 120-190 (284)
118 1chu_A Protein (L-aspartate ox 93.6 0.067 2.3E-06 52.2 5.2 59 132-190 138-208 (540)
119 3ics_A Coenzyme A-disulfide re 93.6 0.094 3.2E-06 51.8 6.3 53 132-188 228-280 (588)
120 3lad_A Dihydrolipoamide dehydr 93.5 0.15 5.2E-06 48.8 7.5 55 132-188 221-278 (476)
121 3cty_A Thioredoxin reductase; 93.5 0.18 6E-06 45.3 7.6 53 135-188 193-250 (319)
122 2h88_A Succinate dehydrogenase 93.5 0.1 3.5E-06 51.8 6.3 58 132-190 155-217 (621)
123 2qae_A Lipoamide, dihydrolipoy 93.5 0.16 5.4E-06 48.6 7.5 54 133-188 216-274 (468)
124 3ces_A MNMG, tRNA uridine 5-ca 93.4 0.12 4.2E-06 51.2 6.7 56 133-190 125-181 (651)
125 3lzw_A Ferredoxin--NADP reduct 93.4 0.11 3.7E-06 46.8 6.0 55 132-188 67-121 (332)
126 1pn0_A Phenol 2-monooxygenase; 93.4 3.3 0.00011 41.3 17.3 36 337-372 351-389 (665)
127 3i3l_A Alkylhalidase CMLS; fla 93.4 0.17 5.8E-06 49.9 7.7 56 133-189 129-187 (591)
128 1v59_A Dihydrolipoamide dehydr 93.4 0.15 5.1E-06 48.8 7.2 56 133-188 225-285 (478)
129 3h8l_A NADH oxidase; membrane 93.3 0.1 3.5E-06 48.9 5.8 51 132-188 218-268 (409)
130 2bc0_A NADH oxidase; flavoprot 93.3 0.12 4.2E-06 49.7 6.5 53 133-188 237-289 (490)
131 1y56_A Hypothetical protein PH 93.3 0.19 6.6E-06 48.4 7.8 63 120-189 250-312 (493)
132 3gwf_A Cyclohexanone monooxyge 93.2 0.15 5.2E-06 49.7 7.0 57 133-189 88-146 (540)
133 4ap3_A Steroid monooxygenase; 93.1 0.16 5.6E-06 49.6 7.1 56 133-188 100-157 (549)
134 2eq6_A Pyruvate dehydrogenase 93.1 0.15 5.3E-06 48.6 6.7 54 133-188 211-269 (464)
135 2zbw_A Thioredoxin reductase; 93.0 0.26 8.7E-06 44.5 7.9 53 134-188 193-250 (335)
136 3ab1_A Ferredoxin--NADP reduct 93.0 0.14 4.8E-06 46.9 6.1 55 133-188 203-261 (360)
137 3klj_A NAD(FAD)-dependent dehy 92.9 0.094 3.2E-06 48.8 4.9 49 136-188 66-114 (385)
138 2a8x_A Dihydrolipoyl dehydroge 92.9 0.22 7.4E-06 47.5 7.6 54 133-188 213-269 (464)
139 3d1c_A Flavin-containing putat 92.8 0.19 6.4E-06 46.1 6.6 55 133-190 89-143 (369)
140 3r9u_A Thioredoxin reductase; 92.7 0.18 6E-06 45.0 6.3 49 139-188 190-242 (315)
141 1coy_A Cholesterol oxidase; ox 92.7 0.17 6E-06 48.9 6.6 62 133-194 227-297 (507)
142 3dk9_A Grase, GR, glutathione 92.7 0.24 8.3E-06 47.4 7.6 56 132-188 228-291 (478)
143 2vou_A 2,6-dihydroxypyridine h 92.7 0.19 6.5E-06 46.8 6.7 52 134-189 101-152 (397)
144 1ojt_A Surface protein; redox- 92.7 0.094 3.2E-06 50.4 4.6 54 133-188 227-284 (482)
145 2zbw_A Thioredoxin reductase; 92.5 0.17 5.8E-06 45.7 6.0 55 133-189 66-120 (335)
146 1zk7_A HGII, reductase, mercur 92.3 0.23 7.8E-06 47.4 6.8 54 133-189 217-270 (467)
147 4hb9_A Similarities with proba 92.3 0.13 4.4E-06 47.8 4.9 44 145-189 122-165 (412)
148 1kf6_A Fumarate reductase flav 92.3 0.17 5.9E-06 50.0 6.0 57 132-189 134-196 (602)
149 3dgz_A Thioredoxin reductase 2 92.2 0.32 1.1E-05 46.7 7.7 56 132-188 225-285 (488)
150 1ebd_A E3BD, dihydrolipoamide 92.1 0.19 6.6E-06 47.8 5.9 55 133-189 212-269 (455)
151 1nhp_A NADH peroxidase; oxidor 92.0 0.21 7.3E-06 47.3 6.2 53 133-188 192-244 (447)
152 3cgb_A Pyridine nucleotide-dis 91.9 0.43 1.5E-05 45.7 8.2 55 132-189 227-281 (480)
153 3urh_A Dihydrolipoyl dehydroge 91.9 0.25 8.4E-06 47.5 6.5 55 132-188 239-298 (491)
154 1fl2_A Alkyl hydroperoxide red 91.8 0.26 8.9E-06 43.9 6.2 56 133-189 57-114 (310)
155 3fbs_A Oxidoreductase; structu 91.8 0.41 1.4E-05 42.1 7.4 60 122-188 165-224 (297)
156 1dxl_A Dihydrolipoamide dehydr 91.7 0.24 8.3E-06 47.2 6.3 55 133-189 219-278 (470)
157 4b1b_A TRXR, thioredoxin reduc 91.7 0.28 9.4E-06 47.9 6.6 55 132-188 263-317 (542)
158 4g6h_A Rotenone-insensitive NA 91.6 0.25 8.5E-06 47.7 6.2 56 131-188 271-330 (502)
159 3uox_A Otemo; baeyer-villiger 91.5 0.26 8.7E-06 48.2 6.1 56 133-188 88-145 (545)
160 1fl2_A Alkyl hydroperoxide red 91.4 0.46 1.6E-05 42.2 7.4 52 136-188 183-240 (310)
161 1jnr_A Adenylylsulfate reducta 91.3 0.36 1.2E-05 48.1 7.2 58 132-189 151-217 (643)
162 3vrd_B FCCB subunit, flavocyto 91.1 0.1 3.4E-06 48.7 2.7 44 143-188 213-256 (401)
163 3f8d_A Thioredoxin reductase ( 91.0 0.32 1.1E-05 43.3 6.0 54 133-189 71-124 (323)
164 4eqs_A Coenzyme A disulfide re 90.8 0.43 1.5E-05 45.1 6.9 52 131-188 187-238 (437)
165 3f8d_A Thioredoxin reductase ( 90.8 0.55 1.9E-05 41.8 7.3 50 137-188 194-249 (323)
166 4gcm_A TRXR, thioredoxin reduc 90.7 0.31 1.1E-05 43.5 5.6 45 330-375 264-308 (312)
167 3fpz_A Thiazole biosynthetic e 90.7 0.15 5.2E-06 46.1 3.5 42 332-373 279-325 (326)
168 2gv8_A Monooxygenase; FMO, FAD 90.6 0.22 7.4E-06 47.3 4.6 56 133-190 116-177 (447)
169 2bry_A NEDD9 interacting prote 90.6 0.21 7.1E-06 48.2 4.5 57 133-190 167-230 (497)
170 3cp8_A TRNA uridine 5-carboxym 90.5 0.35 1.2E-05 47.9 6.0 55 133-189 118-173 (641)
171 2xdo_A TETX2 protein; tetracyc 90.4 0.19 6.5E-06 46.8 3.9 48 146-195 140-188 (398)
172 1w4x_A Phenylacetone monooxyge 90.4 0.49 1.7E-05 46.1 7.0 55 134-189 96-153 (542)
173 3h28_A Sulfide-quinone reducta 90.3 0.34 1.2E-05 45.6 5.7 50 133-188 201-254 (430)
174 1c0p_A D-amino acid oxidase; a 90.2 0.83 2.8E-05 41.7 8.1 44 132-190 142-185 (363)
175 2q0l_A TRXR, thioredoxin reduc 90.1 0.43 1.5E-05 42.4 6.0 53 133-188 60-112 (311)
176 1vdc_A NTR, NADPH dependent th 90.0 0.46 1.6E-05 42.7 6.1 53 133-189 71-123 (333)
177 2xve_A Flavin-containing monoo 90.0 0.48 1.6E-05 45.2 6.4 57 133-190 102-166 (464)
178 2q0l_A TRXR, thioredoxin reduc 89.9 0.69 2.3E-05 41.0 7.2 52 136-188 182-239 (311)
179 3k30_A Histamine dehydrogenase 89.9 0.19 6.6E-06 50.6 3.7 51 134-188 569-622 (690)
180 1xhc_A NADH oxidase /nitrite r 89.8 0.34 1.2E-05 44.6 5.1 49 133-188 184-232 (367)
181 2q7v_A Thioredoxin reductase; 89.7 0.86 2.9E-05 40.8 7.7 51 136-188 191-247 (325)
182 3gyx_A Adenylylsulfate reducta 89.7 0.43 1.5E-05 47.7 6.0 57 132-188 166-231 (662)
183 3lzw_A Ferredoxin--NADP reduct 89.5 0.7 2.4E-05 41.3 6.9 51 136-188 193-248 (332)
184 1hyu_A AHPF, alkyl hydroperoxi 89.3 0.61 2.1E-05 45.2 6.7 56 133-189 268-325 (521)
185 3nlc_A Uncharacterized protein 89.3 1.1 3.9E-05 43.5 8.5 40 332-373 503-543 (549)
186 2e5v_A L-aspartate oxidase; ar 89.2 0.48 1.6E-05 45.3 5.8 56 132-189 119-175 (472)
187 3ic9_A Dihydrolipoamide dehydr 89.2 0.78 2.7E-05 44.0 7.3 53 133-188 216-272 (492)
188 1lvl_A Dihydrolipoamide dehydr 89.2 0.44 1.5E-05 45.3 5.5 52 133-188 213-266 (458)
189 2gjc_A Thiazole biosynthetic e 89.1 0.99 3.4E-05 40.7 7.4 39 133-171 147-191 (326)
190 3s5w_A L-ornithine 5-monooxyge 88.6 0.78 2.7E-05 43.5 6.9 43 145-189 329-376 (463)
191 1vdc_A NTR, NADPH dependent th 88.4 1.1 3.6E-05 40.3 7.3 53 136-188 198-257 (333)
192 3c96_A Flavin-containing monoo 88.4 0.65 2.2E-05 43.3 6.0 60 133-195 108-175 (410)
193 2q7v_A Thioredoxin reductase; 88.2 1 3.5E-05 40.3 7.0 55 133-189 66-122 (325)
194 3jsk_A Cypbp37 protein; octame 87.7 1.1 3.9E-05 40.6 6.9 57 133-189 161-250 (344)
195 2a87_A TRXR, TR, thioredoxin r 87.6 1.1 3.7E-05 40.3 6.9 53 133-189 72-125 (335)
196 3d1c_A Flavin-containing putat 87.5 0.52 1.8E-05 43.0 4.7 51 136-188 218-270 (369)
197 2jbv_A Choline oxidase; alcoho 87.1 0.7 2.4E-05 45.1 5.5 51 144-194 221-277 (546)
198 3s5w_A L-ornithine 5-monooxyge 87.0 0.54 1.9E-05 44.6 4.6 55 134-188 129-190 (463)
199 4a5l_A Thioredoxin reductase; 86.9 0.67 2.3E-05 41.1 5.0 43 331-374 271-313 (314)
200 3fbs_A Oxidoreductase; structu 86.6 0.77 2.6E-05 40.2 5.1 40 332-373 253-292 (297)
201 3itj_A Thioredoxin reductase 1 86.5 1.1 3.6E-05 40.2 6.1 53 133-188 85-140 (338)
202 1kdg_A CDH, cellobiose dehydro 86.2 0.74 2.5E-05 44.8 5.2 57 137-194 200-265 (546)
203 4fk1_A Putative thioredoxin re 85.9 1.2 4.3E-05 39.3 6.2 63 120-186 170-232 (304)
204 1trb_A Thioredoxin reductase; 85.8 1.4 4.7E-05 39.2 6.4 53 133-189 63-115 (320)
205 3hyw_A Sulfide-quinone reducta 85.2 1.1 3.6E-05 42.2 5.6 52 133-188 201-254 (430)
206 3sx6_A Sulfide-quinone reducta 85.0 1.3 4.4E-05 41.7 6.1 51 133-187 209-266 (437)
207 1q1r_A Putidaredoxin reductase 85.0 1.1 3.8E-05 42.1 5.6 46 139-188 67-112 (431)
208 1xhc_A NADH oxidase /nitrite r 84.6 0.77 2.6E-05 42.2 4.2 44 140-188 68-111 (367)
209 2cul_A Glucose-inhibited divis 84.3 1 3.4E-05 38.3 4.6 36 334-372 196-231 (232)
210 1cjc_A Protein (adrenodoxin re 84.3 1.6 5.3E-05 41.6 6.3 44 145-188 270-331 (460)
211 3ef6_A Toluene 1,2-dioxygenase 84.1 1.3 4.6E-05 41.2 5.8 46 140-189 65-110 (410)
212 2gag_A Heterotetrameric sarcos 84.0 1.6 5.5E-05 45.7 6.8 50 139-188 323-381 (965)
213 3r9u_A Thioredoxin reductase; 84.0 1.5 5E-05 38.8 5.7 42 331-373 271-312 (315)
214 4fk1_A Putative thioredoxin re 84.0 1.9 6.4E-05 38.2 6.4 43 330-373 258-300 (304)
215 1hyu_A AHPF, alkyl hydroperoxi 83.7 2 6.8E-05 41.5 6.9 51 136-187 394-450 (521)
216 3pl8_A Pyranose 2-oxidase; sub 83.5 1.2 4E-05 44.2 5.2 50 145-194 273-328 (623)
217 2r0c_A REBC; flavin adenine di 83.5 1.8 6.2E-05 42.1 6.6 57 134-195 140-202 (549)
218 2a87_A TRXR, TR, thioredoxin r 83.3 1.6 5.3E-05 39.3 5.7 50 333-383 277-326 (335)
219 3hyw_A Sulfide-quinone reducta 83.3 0.4 1.4E-05 45.2 1.7 43 142-189 66-108 (430)
220 2ywl_A Thioredoxin reductase r 81.6 2.3 7.7E-05 34.2 5.5 41 332-373 131-171 (180)
221 3qfa_A Thioredoxin reductase 1 81.5 2.7 9.4E-05 40.5 6.9 56 132-188 250-313 (519)
222 3kd9_A Coenzyme A disulfide re 81.4 2.3 7.7E-05 40.1 6.2 52 133-188 191-242 (449)
223 3lxd_A FAD-dependent pyridine 81.3 1.2 4.1E-05 41.5 4.2 48 137-188 70-117 (415)
224 3qvp_A Glucose oxidase; oxidor 81.1 1.9 6.5E-05 42.3 5.6 51 144-194 239-297 (583)
225 3cty_A Thioredoxin reductase; 81.0 2.1 7.1E-05 38.0 5.6 53 133-189 73-125 (319)
226 3l8k_A Dihydrolipoyl dehydroge 80.3 1.8 6.2E-05 41.0 5.1 42 146-188 225-270 (466)
227 2vdc_G Glutamate synthase [NAD 78.9 2.2 7.6E-05 40.4 5.2 41 332-374 405-445 (456)
228 1ps9_A 2,4-dienoyl-COA reducta 78.9 3.6 0.00012 41.1 7.0 50 135-189 576-627 (671)
229 2x8g_A Thioredoxin glutathione 78.8 4.6 0.00016 39.6 7.7 57 132-188 326-393 (598)
230 1ju2_A HydroxynitrIle lyase; f 78.6 2.6 9.1E-05 40.8 5.8 53 142-194 204-265 (536)
231 2gqw_A Ferredoxin reductase; f 76.5 2.8 9.5E-05 39.0 5.1 42 143-188 70-111 (408)
232 3fim_B ARYL-alcohol oxidase; A 75.3 1.6 5.4E-05 42.7 3.1 52 143-194 219-280 (566)
233 1gpe_A Protein (glucose oxidas 74.5 2.8 9.7E-05 41.1 4.7 51 144-194 243-301 (587)
234 3sx6_A Sulfide-quinone reducta 74.4 3.2 0.00011 39.0 4.9 47 138-189 65-111 (437)
235 1m6i_A Programmed cell death p 74.2 2 7E-05 41.1 3.6 41 144-188 102-142 (493)
236 3fg2_P Putative rubredoxin red 72.0 5.9 0.0002 36.6 6.1 47 137-188 62-108 (404)
237 3h8l_A NADH oxidase; membrane 72.0 4.6 0.00016 37.4 5.3 42 331-372 293-335 (409)
238 1lqt_A FPRA; NADP+ derivative, 71.9 3 0.0001 39.5 4.1 42 145-188 265-324 (456)
239 3q9t_A Choline dehydrogenase a 71.7 3.6 0.00012 40.3 4.6 51 144-194 218-274 (577)
240 3uox_A Otemo; baeyer-villiger 71.6 3 0.0001 40.5 4.1 46 138-190 344-391 (545)
241 3vrd_B FCCB subunit, flavocyto 70.5 6.9 0.00024 35.9 6.2 41 333-373 283-324 (401)
242 3gwf_A Cyclohexanone monooxyge 69.5 2.2 7.4E-05 41.5 2.5 43 143-191 341-385 (540)
243 1nhp_A NADH peroxidase; oxidor 69.4 4.8 0.00016 37.8 4.9 48 139-188 63-113 (447)
244 3cgb_A Pyridine nucleotide-dis 69.3 5 0.00017 38.1 5.0 42 145-188 106-150 (480)
245 2bc0_A NADH oxidase; flavoprot 68.7 5.4 0.00019 38.0 5.2 46 139-188 99-147 (490)
246 4b63_A L-ornithine N5 monooxyg 68.3 7.2 0.00025 37.3 5.9 56 133-188 146-212 (501)
247 3ics_A Coenzyme A-disulfide re 66.8 6.4 0.00022 38.5 5.4 51 136-188 97-150 (588)
248 1gte_A Dihydropyrimidine dehyd 66.6 12 0.00043 39.3 7.7 50 138-188 376-440 (1025)
249 3oc4_A Oxidoreductase, pyridin 66.5 6.3 0.00022 37.1 5.1 48 139-188 65-113 (452)
250 2cdu_A NADPH oxidase; flavoenz 65.5 6.6 0.00023 36.9 5.0 48 139-188 65-115 (452)
251 3ntd_A FAD-dependent pyridine 65.0 6.6 0.00023 38.1 5.0 44 143-188 69-115 (565)
252 4a5l_A Thioredoxin reductase; 64.9 14 0.00046 32.4 6.8 54 133-189 67-120 (314)
253 3kd9_A Coenzyme A disulfide re 64.9 4.7 0.00016 37.9 3.8 42 143-188 70-112 (449)
254 1o94_A Tmadh, trimethylamine d 63.5 4.8 0.00016 40.7 3.8 49 136-188 575-644 (729)
255 3h28_A Sulfide-quinone reducta 63.3 9.4 0.00032 35.5 5.6 45 140-189 64-108 (430)
256 2vdc_G Glutamate synthase [NAD 63.3 3.9 0.00013 38.7 2.9 48 139-188 309-376 (456)
257 2a8x_A Dihydrolipoyl dehydroge 61.0 11 0.00038 35.4 5.7 38 331-370 296-333 (464)
258 3ic9_A Dihydrolipoamide dehydr 60.9 9.2 0.00031 36.4 5.1 38 331-370 300-337 (492)
259 2i0z_A NAD(FAD)-utilizing dehy 60.8 7.8 0.00027 36.4 4.5 38 334-371 402-442 (447)
260 1ebd_A E3BD, dihydrolipoamide 60.6 9 0.00031 36.0 5.0 37 332-370 296-332 (455)
261 3l8k_A Dihydrolipoyl dehydroge 59.3 9.9 0.00034 35.9 5.0 38 331-370 295-332 (466)
262 4dna_A Probable glutathione re 59.1 9.7 0.00033 35.9 4.9 38 331-370 293-330 (463)
263 3t37_A Probable dehydrogenase; 58.7 10 0.00034 36.4 5.0 50 145-195 224-276 (526)
264 3lad_A Dihydrolipoamide dehydr 58.5 11 0.00037 35.7 5.1 38 331-370 305-342 (476)
265 3dk9_A Grase, GR, glutathione 58.5 10 0.00035 35.9 4.9 39 331-371 318-356 (478)
266 3o0h_A Glutathione reductase; 56.4 12 0.00039 35.6 4.9 38 331-370 313-350 (484)
267 3urh_A Dihydrolipoyl dehydroge 56.2 10 0.00034 36.1 4.5 38 331-370 325-362 (491)
268 4ap3_A Steroid monooxygenase; 55.9 6.9 0.00024 38.0 3.3 43 142-191 353-397 (549)
269 3iwa_A FAD-dependent pyridine 55.8 9.7 0.00033 36.0 4.3 43 144-188 78-123 (472)
270 1v59_A Dihydrolipoamide dehydr 55.5 13 0.00044 35.1 5.1 38 331-370 312-349 (478)
271 3dgh_A TRXR-1, thioredoxin red 54.9 13 0.00043 35.3 4.9 39 331-370 313-351 (483)
272 1dxl_A Dihydrolipoamide dehydr 54.9 13 0.00043 35.1 4.9 37 332-370 305-341 (470)
273 2v3a_A Rubredoxin reductase; a 54.7 14 0.00047 33.7 5.0 43 141-188 69-111 (384)
274 3dgz_A Thioredoxin reductase 2 54.6 14 0.00046 35.2 5.1 39 331-370 313-351 (488)
275 1ges_A Glutathione reductase; 54.3 13 0.00044 34.9 4.8 38 331-370 290-327 (450)
276 2hqm_A GR, grase, glutathione 54.2 13 0.00045 35.2 4.9 38 331-370 309-346 (479)
277 1gte_A Dihydropyrimidine dehyd 53.7 13 0.00044 39.2 5.1 40 332-373 469-508 (1025)
278 3klj_A NAD(FAD)-dependent dehy 53.5 11 0.00036 34.7 4.0 40 331-370 252-293 (385)
279 1y56_A Hypothetical protein PH 53.0 11 0.00039 35.8 4.2 36 335-373 342-377 (493)
280 2gjc_A Thiazole biosynthetic e 52.4 12 0.0004 33.6 3.9 38 336-373 283-325 (326)
281 3qfa_A Thioredoxin reductase 1 52.4 15 0.0005 35.3 5.0 39 331-370 341-379 (519)
282 2gqf_A Hypothetical protein HI 51.9 10 0.00035 35.0 3.7 35 334-368 361-398 (401)
283 4eqs_A Coenzyme A disulfide re 51.8 22 0.00076 33.1 6.0 41 330-370 262-310 (437)
284 2wpf_A Trypanothione reductase 51.5 16 0.00054 34.8 5.0 38 331-370 317-354 (495)
285 1fec_A Trypanothione reductase 51.4 16 0.00054 34.7 5.0 38 331-370 313-350 (490)
286 1zmd_A Dihydrolipoyl dehydroge 51.4 13 0.00046 35.0 4.5 38 331-370 307-344 (474)
287 2r9z_A Glutathione amide reduc 50.7 16 0.00056 34.3 4.9 37 332-370 290-326 (463)
288 1d4d_A Flavocytochrome C fumar 50.1 7.4 0.00025 38.0 2.5 38 334-371 525-568 (572)
289 2qae_A Lipoamide, dihydrolipoy 49.8 14 0.00049 34.7 4.4 39 331-370 301-339 (468)
290 1ojt_A Surface protein; redox- 49.0 15 0.00051 34.8 4.4 38 331-370 311-348 (482)
291 2x8g_A Thioredoxin glutathione 48.4 19 0.00066 35.1 5.2 38 332-370 421-458 (598)
292 2eq6_A Pyruvate dehydrogenase 48.2 16 0.00055 34.4 4.4 38 331-370 296-333 (464)
293 1qo8_A Flavocytochrome C3 fuma 47.5 10 0.00035 36.9 3.0 39 333-371 518-562 (566)
294 2gag_A Heterotetrameric sarcos 47.5 15 0.00051 38.4 4.3 40 334-376 408-447 (965)
295 1xdi_A RV3303C-LPDA; reductase 47.0 16 0.00054 34.8 4.2 38 331-370 304-341 (499)
296 3cp8_A TRNA uridine 5-carboxym 46.9 18 0.0006 35.8 4.5 35 335-372 377-411 (641)
297 1zk7_A HGII, reductase, mercur 46.5 17 0.00059 34.1 4.4 38 331-370 296-333 (467)
298 1mo9_A ORF3; nucleotide bindin 46.3 17 0.00059 34.8 4.4 38 331-370 340-377 (523)
299 3jsk_A Cypbp37 protein; octame 46.0 8.7 0.0003 34.8 2.0 41 336-376 293-338 (344)
300 2yqu_A 2-oxoglutarate dehydrog 45.8 30 0.001 32.3 5.9 37 332-370 290-326 (455)
301 1chu_A Protein (L-aspartate ox 45.3 14 0.00049 35.6 3.6 40 333-372 364-410 (540)
302 3g5s_A Methylenetetrahydrofola 44.6 17 0.00057 33.8 3.7 34 335-371 327-360 (443)
303 1lvl_A Dihydrolipoamide dehydr 44.4 20 0.00068 33.6 4.4 37 332-370 293-329 (458)
304 1y0p_A Fumarate reductase flav 44.3 11 0.00037 36.7 2.6 39 333-371 523-567 (571)
305 4a9w_A Monooxygenase; baeyer-v 43.4 15 0.0005 32.7 3.2 35 148-188 249-283 (357)
306 3ces_A MNMG, tRNA uridine 5-ca 42.8 23 0.00078 35.1 4.6 33 335-370 383-415 (651)
307 4g6h_A Rotenone-insensitive NA 41.3 27 0.00092 33.3 4.8 41 331-371 358-399 (502)
308 4gcm_A TRXR, thioredoxin reduc 40.4 47 0.0016 28.8 6.1 51 134-188 64-114 (312)
309 1kf6_A Fumarate reductase flav 40.3 21 0.00072 35.0 4.0 41 332-372 368-415 (602)
310 1jnr_A Adenylylsulfate reducta 40.2 27 0.00094 34.5 4.8 40 333-372 428-467 (643)
311 4at0_A 3-ketosteroid-delta4-5a 40.0 16 0.00056 34.8 3.1 37 333-369 465-507 (510)
312 3k30_A Histamine dehydrogenase 39.4 11 0.00038 37.7 1.8 36 334-372 639-674 (690)
313 2zxi_A TRNA uridine 5-carboxym 38.2 30 0.001 34.1 4.6 32 336-370 389-420 (637)
314 1lqt_A FPRA; NADP+ derivative, 38.1 26 0.0009 32.9 4.1 40 334-374 349-388 (456)
315 3v76_A Flavoprotein; structura 37.9 16 0.00055 33.9 2.6 34 334-367 380-416 (417)
316 1w4x_A Phenylacetone monooxyge 37.8 21 0.00073 34.3 3.5 45 139-190 345-391 (542)
317 1onf_A GR, grase, glutathione 36.3 29 0.00099 33.0 4.2 39 332-370 300-370 (500)
318 4b1b_A TRXR, thioredoxin reduc 36.2 38 0.0013 32.7 5.0 39 331-370 345-383 (542)
319 1o94_A Tmadh, trimethylamine d 35.9 11 0.00037 38.0 1.1 37 333-372 663-699 (729)
320 3c4a_A Probable tryptophan hyd 35.2 11 0.00036 34.5 0.8 46 134-193 100-145 (381)
321 1rp0_A ARA6, thiazole biosynth 35.0 26 0.0009 30.3 3.4 38 336-373 233-275 (284)
322 1cjc_A Protein (adrenodoxin re 34.7 26 0.00088 33.0 3.5 41 333-374 355-396 (460)
323 2bs2_A Quinol-fumarate reducta 31.6 48 0.0016 32.9 5.0 41 332-372 381-428 (660)
324 2gv8_A Monooxygenase; FMO, FAD 29.5 33 0.0011 31.9 3.3 36 149-188 254-290 (447)
325 2h88_A Succinate dehydrogenase 29.2 23 0.00078 34.9 2.1 39 334-372 387-432 (621)
326 3gyx_A Adenylylsulfate reducta 27.9 55 0.0019 32.4 4.7 42 331-372 447-488 (662)
327 2e5v_A L-aspartate oxidase; ar 26.5 20 0.00068 33.9 1.1 40 331-370 324-370 (472)
328 2wdq_A Succinate dehydrogenase 22.2 26 0.00089 34.2 1.0 38 335-372 379-423 (588)
329 4b63_A L-ornithine N5 monooxyg 21.9 38 0.0013 32.2 2.1 41 148-188 355-407 (501)
330 2x3n_A Probable FAD-dependent 20.4 79 0.0027 28.6 3.9 36 337-372 286-324 (399)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=1.4e-31 Score=257.83 Aligned_cols=309 Identities=17% Similarity=0.261 Sum_probs=236.1
Q ss_pred CCCHHHHHHhhhhhHHHHhccccccccccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHHhc
Q 016397 37 MLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ 116 (390)
Q Consensus 37 ~ls~~~k~r~~~~~~~~~~~~~~~~~~~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~ 116 (390)
.+++.+|.++...+... .. ...+++|+.+|++++ ++++.++.++++++...++.+++++|+.+++..+..+..
T Consensus 112 ~~~~~~~~~~~~~~~~~----~~--~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 184 (425)
T 3ka7_A 112 LLSYKDRMKIALLIVST----RK--NRPSGSSLQAWIKSQ-VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYR 184 (425)
T ss_dssp GSCHHHHHHHHHHHHHT----TT--SCCCSSBHHHHHHHH-CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHhh----hh--cCCCCCCHHHHHHHh-cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHh
Confidence 57888888876543321 10 234689999999999 889999999999998888889999999988877765432
Q ss_pred ccCCceEEeecCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhHhhhcC
Q 016397 117 EKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP 196 (390)
Q Consensus 117 ~~~~~~~~~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~~~ll~ 196 (390)
. + ...++.||+ +.|+++|++.++++|++|+++++|++|..+ ++++++|++ +|++++||.||+|+|+..+.+|++
T Consensus 185 -~-~-~~~~~~gG~-~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 185 -F-G-GTGIPEGGC-KGIIDALETVISANGGKIHTGQEVSKILIE-NGKAAGIIA-DDRIHDADLVISNLGHAATAVLCS 258 (425)
T ss_dssp -H-C-SCEEETTSH-HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEE-TTEEEECSEEEECSCHHHHHHHTT
T ss_pred -c-C-CccccCCCH-HHHHHHHHHHHHHcCCEEEECCceeEEEEE-CCEEEEEEE-CCEEEECCEEEECCCHHHHHHhcC
Confidence 1 1 246899997 899999999999999999999999999985 456766777 478899999999999999999987
Q ss_pred cch-h--ccHHHHHhhcCCCccEEEEEEEeCccccccCCceeecCC--CcchhhhhcccccccccCCCCcEEEEEecCCC
Q 016397 197 ENW-K--EMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRS--SLLSVYADMSLTCKEYYNPNQSMLELVFAPAE 271 (390)
Q Consensus 197 ~~~-~--~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~~a~~g~~ll~~~~~~~~ 271 (390)
+.. . +.++.+.++++++.+.++++++++++++. ..++++..+ ++.++ ..+|..+|+++|+|++++.+.+....
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~-~~~~~~~~~~~~~~~~-~~~s~~~p~~ap~G~~~l~~~~~~~~ 336 (425)
T 3ka7_A 259 EALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVG-HTGVLLTPYTRRINGV-NEVTQADPELAPPGKHLTMCHQYVAP 336 (425)
T ss_dssp TTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSC-SSSEEECCSSSSEEEE-ECGGGTCGGGSCTTCEEEEEEEEECG
T ss_pred CcccccCCHHHHHHhhCcCCCceEEEEeecCCCccC-cCEEEECCChhhcceE-EeccCCCCCcCCCCCeEEEEEecccc
Confidence 431 1 44677788889999889999999998764 344555432 23223 24555778889999998876544221
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCccccccCceEEEEEEEEeCCceeccCCCCCCCCCCCCCCCCCeEEecccccCCCC
Q 016397 272 EWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYL 351 (390)
Q Consensus 272 ~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~l~~aGd~~~~~~~ 351 (390)
+..+. .+++++.++++|++++|... .+++ .+.+|+.+.|++.+|+. .++...+|++|||+||||+.+.++
T Consensus 337 ~~~~~-~~~~~~~~~~~l~~~~p~~~------~~~~--~v~~~~~~~P~~~~~~~-~~~~~~~p~~gL~laG~~~~~~gg 406 (425)
T 3ka7_A 337 ENVKN-LESEIEMGLEDLKEIFPGKR------YEVL--LIQSYHDEWPVNRAASG-TDPGNETPFSGLYVVGDGAKGKGG 406 (425)
T ss_dssp GGGGG-HHHHHHHHHHHHHHHSTTCC------EEEE--EEEEEBTTBCSBSSCTT-CCCCSBCSSBTEEECSTTSCCTTC
T ss_pred ccccc-hHHHHHHHHHHHHHhCCCCc------eEEE--EEEEECCCccccccccC-CCCCCCCCcCCeEEeCCccCCCCC
Confidence 11122 34567999999999998732 2333 67889999998888854 456778889999999999999777
Q ss_pred CchhHHHHHHHHHHHHHHH
Q 016397 352 ASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 352 ~~~~gA~~SG~~aA~~il~ 370 (390)
.+|++|+.||++||++|+.
T Consensus 407 ~gv~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 407 IEVEGVALGVMSVMEKVLG 425 (425)
T ss_dssp CHHHHHHHHHHHHHHC---
T ss_pred CccHHHHHHHHHHHHHhhC
Confidence 8999999999999999863
No 2
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.97 E-value=5.3e-28 Score=232.63 Aligned_cols=300 Identities=12% Similarity=0.106 Sum_probs=208.0
Q ss_pred CCHHHHHHhhhhhHHHHhccccccccccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHHhcc
Q 016397 38 LTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE 117 (390)
Q Consensus 38 ls~~~k~r~~~~~~~~~~~~~~~~~~~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~ 117 (390)
+++.++.++...+...... ....+++|+.+|+++++++++.++.+++|++..+++.+++++|+.+++..+.....
T Consensus 103 l~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 177 (421)
T 3nrn_A 103 LSVKEKAKALKLLAEIRMN----KLPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALR- 177 (421)
T ss_dssp CC--------CCHHHHHTT----CCCCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH-
T ss_pred CCHhHHHHHHHHHHHHHhc----cCCCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhh-
Confidence 5667777765443322110 12235699999999988899999999999999888889999999988877765432
Q ss_pred cCCceEEeecCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhHhhhcCc
Q 016397 118 KHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPE 197 (390)
Q Consensus 118 ~~~~~~~~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~~~ll~~ 197 (390)
.. ...+++||+ +.|+++|++.++++|++|+++++|++|..+ ++++ | +.+|++++||.||+|+|+..+.+|++.
T Consensus 178 ~~--g~~~~~gG~-~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~~ll~~ 250 (421)
T 3nrn_A 178 WG--GPGLIRGGC-KAVIDELERIIMENKGKILTRKEVVEINIE-EKKV--Y-TRDNEEYSFDVAISNVGVRETVKLIGR 250 (421)
T ss_dssp HC--SCEEETTCH-HHHHHHHHHHHHTTTCEEESSCCEEEEETT-TTEE--E-ETTCCEEECSEEEECSCHHHHHHHHCG
T ss_pred cC--CcceecCCH-HHHHHHHHHHHHHCCCEEEcCCeEEEEEEE-CCEE--E-EeCCcEEEeCEEEECCCHHHHHHhcCc
Confidence 11 246899997 899999999999999999999999999985 4545 5 457788999999999999999999874
Q ss_pred chhccHHHHHhhcCCCccEEEEEEEeCccccccCCceeecCCC-cchhhhhcccccccccCCCCcEEEEEecCCCCCCCC
Q 016397 198 NWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSS-LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISC 276 (390)
Q Consensus 198 ~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~a~~g~~ll~~~~~~~~~~~~~ 276 (390)
...+..+.+.+.++++.++.++++.++++.... .++++..++ +.++ ...+..++.++|+|++++.+...-. ..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~~~~~~~~~~~~~i-~~~s~~~p~~ap~G~~~~~~~~~~~----~~ 324 (421)
T 3nrn_A 251 DYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIG-NTIVFTPGLMINGF-NEPSALDKSLAREGYTLIMAHMALK----NG 324 (421)
T ss_dssp GGSCHHHHHHHHTCCCCCEEEEEEEEESSCSSC-SSEEECTTSSSCEE-ECGGGTCGGGSCTTEEEEEEEEECT----TC
T ss_pred ccCCHHHHHHHhCCCCCceEEEEEEEcCCcccC-CeEEEcCCcceeeE-eccCCCCCCcCCCCceEEEEEEeec----cc
Confidence 323445677888899999999999999875432 345554332 2222 2345567778888888877654311 22
Q ss_pred CHHHHHHHHHHHHHHhCCCCccccccCceEEEEEEEEeCCceeccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchhH
Q 016397 277 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEG 356 (390)
Q Consensus 277 ~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~l~~aGd~~~~~~~~~~~g 356 (390)
+.++.++.++++|++++| .. +++ .+.+|+.+.+++.+..... .. .++ +|||+||||+.+.++.+|++
T Consensus 325 ~~~~~~~~~~~~L~~~~p-~~-------~~~--~~~~~~~~~p~~~~~~~~~-~~-~~~-~gl~laGd~~~~~~g~~~~g 391 (421)
T 3nrn_A 325 NVKKAIEKGWEELLEIFP-EG-------EPL--LAQVYRDGNPVNRTRAGLH-IE-WPL-NEVLVVGDGYRPPGGIEVDG 391 (421)
T ss_dssp CHHHHHHHHHHHHHHHCT-TC-------EEE--EEEEC-------------C-CC-CCC-SSEEECSTTCCCTTCCHHHH
T ss_pred cHHHHHHHHHHHHHHHcC-CC-------eEE--EeeeccCCCCcccccCCCC-CC-CCC-CcEEEECCcccCCCceeeeh
Confidence 345668999999999999 21 343 3456777766653221111 22 677 99999999999863335699
Q ss_pred HHHHHHHHHHHH
Q 016397 357 AVLSGKLCAQAI 368 (390)
Q Consensus 357 A~~SG~~aA~~i 368 (390)
|+.||++||++|
T Consensus 392 a~~sg~~aA~~l 403 (421)
T 3nrn_A 392 IALGVMKALEKL 403 (421)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999999998
No 3
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.96 E-value=9.6e-30 Score=248.06 Aligned_cols=315 Identities=16% Similarity=0.215 Sum_probs=222.6
Q ss_pred HHHcCCCCCCHHHHHHhhhhhHHHHhccccccccccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCCcccccHHHHHH
Q 016397 30 AILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILI 109 (390)
Q Consensus 30 ~ll~~~~~ls~~~k~r~~~~~~~~~~~~~~~~~~~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~ 109 (390)
.+++. +.+++.+|++.+...+ .. .....+++|+.+|++++ ++.+..+.+++|++.++|+.+++++|+.+.+.
T Consensus 120 ~~~~~-~~~~~~~~~~~~~~~~---~~---~~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 191 (470)
T 3i6d_A 120 PFVST-GLFSLSGKARAAMDFI---LP---ASKTKDDQSLGEFFRRR-VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFP 191 (470)
T ss_dssp -----------CCSHHHHHHHH---SC---CCSSSSCCBHHHHHHHH-SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCG
T ss_pred Hhhcc-CcCCHHHHHHHhcCcc---cC---CCCCCCCcCHHHHHHHh-cCHHHHHHhccchhcEEecCCHHHhhHHHHHH
Confidence 55555 6778878877654322 11 12346899999999998 89999999999999999989999999987765
Q ss_pred HHHHH-------hcc---------------cCCceEEeecCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEE
Q 016397 110 ALNRF-------LQE---------------KHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVK 167 (390)
Q Consensus 110 ~l~~~-------~~~---------------~~~~~~~~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~ 167 (390)
.+..+ ... ..+..+.+++||+ +.|+++|++.+.+ ++|+++++|++|+.++++ +
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~-~- 266 (470)
T 3i6d_A 192 QFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGL-QTLVEEIEKQLKL--TKVYKGTKVTKLSHSGSC-Y- 266 (470)
T ss_dssp GGCC-------------------------------EEEETTCT-HHHHHHHHHTCCS--EEEECSCCEEEEEECSSS-E-
T ss_pred HHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCChH-HHHHHHHHHhcCC--CEEEeCCceEEEEEcCCe-E-
Confidence 33111 000 0022566789997 8999999877643 799999999999986554 5
Q ss_pred EEEEcCCeEEEcCEEEEecChhhHhhhcCcchhccHHHHHhhcCCCccEEEEEEEeCcccccc-CC--ceeecCC-C--c
Q 016397 168 NFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT-YD--HLLFSRS-S--L 241 (390)
Q Consensus 168 ~V~~~~g~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~-~~--~~~~~~~-~--~ 241 (390)
.|++.+|++++||+||+|+|++.+.+|+++. +..+++.++.+.++.++++.|++++|.. .. +++.+.. + +
T Consensus 267 ~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~----~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~ 342 (470)
T 3i6d_A 267 SLELDNGVTLDADSVIVTAPHKAAAGMLSEL----PAISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAI 342 (470)
T ss_dssp EEEESSSCEEEESEEEECSCHHHHHHHTTTS----TTHHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSE
T ss_pred EEEECCCCEEECCEEEECCCHHHHHHHcCCc----hhhHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCc
Confidence 4888899889999999999999999998653 2346788899999999999999998742 22 3333322 2 1
Q ss_pred chhhhhcccccccccCCCCcEEEEEecC--CCCCCCCCHHHHHHHHHHHHHHhCCCCccccccCceEEEEEEEEeCCcee
Q 016397 242 LSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVY 319 (390)
Q Consensus 242 ~~~~~~~s~~~~~~a~~g~~ll~~~~~~--~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~ 319 (390)
.++.. .+...+...|++..++.+.++. .+.+..++++++++.++++|.+++|... ++....+++|+++.+
T Consensus 343 ~~~~~-~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~-------~p~~~~~~~w~~a~p 414 (470)
T 3i6d_A 343 TACTW-TNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNING-------EPEMTCVTRWHESMP 414 (470)
T ss_dssp EEEEE-HHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHHHHHHHHHHGGGSCCCS-------CCSEEEEEEEEEEEE
T ss_pred eEEEE-EcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHHHHHHHHHHHHHhCCCC-------CceEEEEEEcCCccC
Confidence 11211 1112234456666777766542 3446678999999999999999998642 456778999999988
Q ss_pred ccCCCCCC----CCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 016397 320 KTIPNCEP----CRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 372 (390)
Q Consensus 320 ~~~~g~~~----~~~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~ 372 (390)
.+.+|+.. .++.+.++.+||||||||+.+ .++++|+.||+++|++|++.+
T Consensus 415 ~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g---~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 415 QYHVGHKQRIKELREALASAYPGVYMTGASFEG---VGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp ECBTTHHHHHHHHHHHHHHHSTTEEECSTTTSC---CSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeecCCC---CCHHHHHHHHHHHHHHHHHHh
Confidence 88888531 122233456899999999875 579999999999999999875
No 4
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.96 E-value=1.1e-28 Score=241.32 Aligned_cols=323 Identities=15% Similarity=0.176 Sum_probs=228.9
Q ss_pred CCChhhHHHHHcCCCCCCHHHHHHhhhhhHHHHhccccccccccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCCccc
Q 016397 22 PAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDE 101 (390)
Q Consensus 22 ~~P~~~~~~ll~~~~~ls~~~k~r~~~~~~~~~~~~~~~~~~~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~~~~ 101 (390)
+.|.+. ..+++. +.+++.++.+++...+ ... ....+++|+.+|+++. +++++++.+++|++.++++.++++
T Consensus 112 ~~p~~~-~~~~~~-~~~~~~~~~~~~~~~~----~~~--~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 182 (478)
T 2ivd_A 112 SVPASP-PAFLAS-DILPLGARLRVAGELF----SRR--APEGVDESLAAFGRRH-LGHRATQVLLDAVQTGIYAGDVEQ 182 (478)
T ss_dssp ECCCSH-HHHHTC-SSSCHHHHHHHHGGGG----CCC--CCTTCCCBHHHHHHHH-TCHHHHHHTHHHHHHHHHCCCTTT
T ss_pred ECCCCH-HHhccC-CCCCHHHHHHHhhhhh----cCC--CCCCCCCCHHHHHHHh-hCHHHHHHHHHHHhceeecCCHHH
Confidence 344444 366766 6889999988764332 111 1246789999999998 999999999999999999899999
Q ss_pred ccHHHHHHHHHHHhc----------------------ccCC----ceEEeecCCCCccchHHHHHHHHHcCcEEEcCcee
Q 016397 102 LSMQCILIALNRFLQ----------------------EKHG----SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRV 155 (390)
Q Consensus 102 ~Sa~~~~~~l~~~~~----------------------~~~~----~~~~~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V 155 (390)
+|+.+++..+..+.. ...+ ....+++||+ +.|+++|++.+ |++|+++++|
T Consensus 183 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~-~~l~~~l~~~l---g~~i~~~~~V 258 (478)
T 2ivd_A 183 LSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGL-QVLIDALAASL---GDAAHVGARV 258 (478)
T ss_dssp BBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCT-HHHHHHHHHHH---GGGEESSEEE
T ss_pred hhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCH-HHHHHHHHHHh---hhhEEcCCEE
Confidence 999877654432210 0012 3567899997 89999999877 6799999999
Q ss_pred eEEEECCCCCEEEEEE---cCCeEEEcCEEEEecChhhHhhhcCcchhccHHHHHhhcCCCccEEEEEEEeCccccccCC
Q 016397 156 QKIELNDDGTVKNFLL---TNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYD 232 (390)
Q Consensus 156 ~~I~~~~~g~v~~V~~---~~g~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~ 232 (390)
++|..++++ + .|++ .+|++++||+||+|+|+..+.+|+++. +....+.++++++.++.++++.+++++|....
T Consensus 259 ~~i~~~~~~-~-~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~l--~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~ 334 (478)
T 2ivd_A 259 EGLAREDGG-W-RLIIEEHGRRAELSVAQVVLAAPAHATAKLLRPL--DDALAALVAGIAYAPIAVVHLGFDAGTLPAPD 334 (478)
T ss_dssp EEEECC--C-C-EEEEEETTEEEEEECSEEEECSCHHHHHHHHTTT--CHHHHHHHHTCCBCCEEEEEEEECTTSSCCCC
T ss_pred EEEEecCCe-E-EEEEeecCCCceEEcCEEEECCCHHHHHHHhhcc--CHHHHHHHhcCCCCcEEEEEEEEccccCCCCC
Confidence 999986554 5 4777 677789999999999999999998752 44566778899999999999999998764211
Q ss_pred --ceeecC---CCcchhhhhcccccccccCCCCcEEEEEec--CCCCCCCCCHHHHHHHHHHHHHHhCCCCccccccCce
Q 016397 233 --HLLFSR---SSLLSVYADMSLTCKEYYNPNQSMLELVFA--PAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAK 305 (390)
Q Consensus 233 --~~~~~~---~~~~~~~~~~s~~~~~~a~~g~~ll~~~~~--~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~ 305 (390)
+.+... .+...+..+ +...+..+|++..++++.+. ....+.+.+++++.+.++++|.+++|... .
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~-s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~ 406 (478)
T 2ivd_A 335 GFGFLVPAEEQRRMLGAIHA-STTFPFRAEGGRVLYSCMVGGARQPGLVEQDEDALAALAREELKALAGVTA-------R 406 (478)
T ss_dssp SSEEECCGGGCCSCCEEEEH-HHHCGGGBSTTCEEEEEEEECTTCGGGGGSCHHHHHHHHHHHHHHHHCCCS-------C
T ss_pred ceEEEecCCCCCceEEEEEE-cccCCCcCCCCCEEEEEEeCCcCCccccCCCHHHHHHHHHHHHHHHhCCCC-------C
Confidence 122221 122222111 11223445666677765543 23345577899999999999999998643 3
Q ss_pred EEEEEEEEeCCceeccCCCCCCC----CCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 016397 306 IVKYHVVKTPRSVYKTIPNCEPC----RPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 373 (390)
Q Consensus 306 ~~~~~~~~~~~a~~~~~~g~~~~----~~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~ 373 (390)
+....+++|+.+.+.+.+|+... ++...+ .+||||||+++.+ .++++|+.||++||++|++.++
T Consensus 407 p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~-~~~l~~aG~~~~g---~gv~gA~~SG~~aA~~i~~~l~ 474 (478)
T 2ivd_A 407 PSFTRVFRWPLGIPQYNLGHLERVAAIDAALQR-LPGLHLIGNAYKG---VGLNDCIRNAAQLADALVAGNT 474 (478)
T ss_dssp CSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHT-STTEEECSTTTSC---CSHHHHHHHHHHHHHHHCC---
T ss_pred CcEEEEEECCCcccCCCcCHHHHHHHHHHHHhh-CCCEEEEccCCCC---CCHHHHHHHHHHHHHHHHHhhc
Confidence 45566889999877777775211 111122 5799999999853 5799999999999999987654
No 5
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.96 E-value=8.6e-29 Score=244.51 Aligned_cols=293 Identities=17% Similarity=0.167 Sum_probs=213.4
Q ss_pred ccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHH------hcccCCceEEeecCCCCccchHH
Q 016397 64 QDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF------LQEKHGSKMAFLDGNPPERLCLP 137 (390)
Q Consensus 64 ~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~------~~~~~~~~~~~~~GG~~~~l~~~ 137 (390)
++++|+.+|++++ +.++.++.++++++.+.++.+++++|+.+++..+... +....+....++.||+ +.|+++
T Consensus 143 ~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~-~~l~~~ 220 (520)
T 1s3e_A 143 WDNMTMKELLDKL-CWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGS-GQVSER 220 (520)
T ss_dssp HHTSBHHHHHHHH-CSSHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCT-HHHHHH
T ss_pred hhccCHHHHHHhh-CCCHHHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCH-HHHHHH
Confidence 6789999999998 5566678899999988888899999999887655321 1111233456789997 899999
Q ss_pred HHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhHhhhcCcchhccHHHHHhhcCCCccEE
Q 016397 138 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVI 217 (390)
Q Consensus 138 l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~~l~~~~~~ 217 (390)
|++.+ |++|++|++|++|..++ +.++ |++.+|++++||+||+|+|+..+.+|+.+...+....++++++.+.++.
T Consensus 221 l~~~l---g~~i~~~~~V~~i~~~~-~~v~-v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~~~~~~~ 295 (520)
T 1s3e_A 221 IMDLL---GDRVKLERPVIYIDQTR-ENVL-VETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVI 295 (520)
T ss_dssp HHHHH---GGGEESSCCEEEEECSS-SSEE-EEETTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCBCCEE
T ss_pred HHHHc---CCcEEcCCeeEEEEECC-CeEE-EEECCCeEEEeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhCCCcceE
Confidence 99876 78999999999999864 4464 8888898899999999999999988863222344566778899999999
Q ss_pred EEEEEeCcccccc--CCceee--cC-CCcchhhhhcccccccccCCCCcEEEEEe-c-CCCCCCCCCHHHHHHHHHHHHH
Q 016397 218 NIHIWFDRKLKNT--YDHLLF--SR-SSLLSVYADMSLTCKEYYNPNQSMLELVF-A-PAEEWISCSDSEIIDATMKELA 290 (390)
Q Consensus 218 ~v~l~~~~~~~~~--~~~~~~--~~-~~~~~~~~~~s~~~~~~a~~g~~ll~~~~-~-~~~~~~~~~~ee~~~~~~~~l~ 290 (390)
++++.|++++|.. +.+.++ .. .++..++ +.+ ..+++..++...+ . .++.|.+++++++++.++++|+
T Consensus 296 kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~-d~~-----~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~ 369 (520)
T 1s3e_A 296 KCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYTL-DDT-----KPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYA 369 (520)
T ss_dssp EEEEECSSCGGGGGTEEEEEEECSTTCSCSEEE-ECC-----CTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred EEEEEeCCCcccCCCCCceeeccCCCCceEEEe-eCC-----CCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHH
Confidence 9999999998852 223322 11 1222111 111 1122234544333 3 3356778899999999999999
Q ss_pred HhCCCCccccccCceEEEEEEEEeCC-----ceec--cCCCCC-CCCCCCCCCCCCeEEecccccCCCCCchhHHHHHHH
Q 016397 291 KLFPDEISADQSKAKIVKYHVVKTPR-----SVYK--TIPNCE-PCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGK 362 (390)
Q Consensus 291 ~~~p~~~~~~~~~~~~~~~~~~~~~~-----a~~~--~~~g~~-~~~~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~ 362 (390)
+++|... ...+..+...+|.. +.|. +.||+. ..++..++|++||||||++++..|+++|+||+.||+
T Consensus 370 ~~~~~~~-----~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~ 444 (520)
T 1s3e_A 370 KVLGSLE-----ALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGE 444 (520)
T ss_dssp HHHTCGG-----GGCCSEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHH
T ss_pred HHhCccc-----cCCccEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHH
Confidence 9998531 12456677788854 3332 345532 233456788899999999998878889999999999
Q ss_pred HHHHHHHHHhhh
Q 016397 363 LCAQAIVQDYVL 374 (390)
Q Consensus 363 ~aA~~il~~~~~ 374 (390)
+||++|++.++.
T Consensus 445 ~aA~~i~~~l~~ 456 (520)
T 1s3e_A 445 RAAREILHAMGK 456 (520)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHHHHhc
Confidence 999999998754
No 6
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.96 E-value=2.5e-29 Score=245.65 Aligned_cols=322 Identities=16% Similarity=0.179 Sum_probs=229.6
Q ss_pred ChhhHHHHHcCCCCCCHHHHHHhhhhhHHHHhcccc-ccccccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCCcccc
Q 016397 24 PLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQA-YVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDEL 102 (390)
Q Consensus 24 P~~~~~~ll~~~~~ls~~~k~r~~~~~~~~~~~~~~-~~~~~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~~~~~ 102 (390)
|.+. ..+++. +.+++.+|+ .+..+. ..... .....+++|+.+|++++ +++++.+.+++|++.++++.+++++
T Consensus 110 p~~~-~~~~~~-~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~l 182 (475)
T 3lov_A 110 PTDL-DLFRQT-TLLTEEEKQ-EVADLL---LHPSDSLRIPEQDIPLGEYLRPR-LGDALVEKLIEPLLSGIYAGNIDQM 182 (475)
T ss_dssp ESCH-HHHTTC-SSSCHHHHH-HHHHHH---HSCCTTCCCCSSCCBHHHHHHHH-HCHHHHHHTHHHHHHGGGCCCTTTS
T ss_pred cCch-HHHhhc-cCCChhHHH-HhhCcc---cCCcccccCCCCCcCHHHHHHHH-hCHHHHHHHHHHHhceeecCChHHc
Confidence 4343 467777 799999998 432222 11111 11246789999999997 8999999999999999999999999
Q ss_pred cHHHHHHHHHHHh-----------ccc--------------CCceEEeecCCCCccchHHHHHHHHHcCcEEEcCceeeE
Q 016397 103 SMQCILIALNRFL-----------QEK--------------HGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQK 157 (390)
Q Consensus 103 Sa~~~~~~l~~~~-----------~~~--------------~~~~~~~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~ 157 (390)
|+.+.+..+..+. ... .+..+.+++||+ +.|+++|++.+.+ ++|+++++|++
T Consensus 183 s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~-~~l~~~l~~~l~~--~~i~~~~~V~~ 259 (475)
T 3lov_A 183 STFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLETGL-ESLIERLEEVLER--SEIRLETPLLA 259 (475)
T ss_dssp BSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEETTCH-HHHHHHHHHHCSS--CEEESSCCCCE
T ss_pred CHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeCChH-HHHHHHHHhhccC--CEEEcCCeeeE
Confidence 9876555442210 001 134577889998 8899999987743 79999999999
Q ss_pred EEECCCCCEEEEEEcCCeEEEcCEEEEecChhhHhhhcCcchhccHHHHHhhcCCCccEEEEEEEeCccccccCC--cee
Q 016397 158 IELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYD--HLL 235 (390)
Q Consensus 158 I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~--~~~ 235 (390)
|..++++ + .|++.+| +++||+||+|+|++.+.+|+++. +. +.+.+++|.++.++++.|+++++.+.. +++
T Consensus 260 i~~~~~~-~-~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~~--~~---~~~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l 331 (475)
T 3lov_A 260 ISREDGR-Y-RLKTDHG-PEYADYVLLTIPHPQVVQLLPDA--HL---PELEQLTTHSTATVTMIFDQQQSLPIEGTGFV 331 (475)
T ss_dssp EEEETTE-E-EEECTTC-CEEESEEEECSCHHHHHHHCTTS--CC---HHHHTCCEEEEEEEEEEEECCSSCSSSSSEEE
T ss_pred EEEeCCE-E-EEEECCC-eEECCEEEECCCHHHHHHHcCcc--CH---HHHhcCCCCeEEEEEEEECCcCCCCCCCEEEE
Confidence 9986444 5 4888888 79999999999999999998764 22 567888999999999999998742222 233
Q ss_pred ecCC-C--cchhhhhcccccccccCCCCcEEEEEec--CCCCCCCCCHHHHHHHHHHHHHHhCCCCccccccCceEEEEE
Q 016397 236 FSRS-S--LLSVYADMSLTCKEYYNPNQSMLELVFA--PAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYH 310 (390)
Q Consensus 236 ~~~~-~--~~~~~~~~s~~~~~~a~~g~~ll~~~~~--~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ 310 (390)
.... + +.++.. .+...+...|+ ..++.+.++ ....+..++++++++.++++|.+++|... ++....
T Consensus 332 ~~~~~~~~~~~~~~-~s~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~L~~~~g~~~-------~p~~~~ 402 (475)
T 3lov_A 332 VNRRAPYSITACTA-IDQKWNHSAPD-HTVLRAFVGRPGNDHLVHESDEVLQQAVLQDLEKICGRTL-------EPKQVI 402 (475)
T ss_dssp ECTTSSCSEEEEEE-HHHHCTTTCTT-EEEEEEEECBTTBCGGGGSCHHHHHHHHHHHHHHHHSSCC-------CCSEEE
T ss_pred ecCCCCCceEEEEE-EcccCCCCCCC-cEEEEEEeCCCCCCcccCCCHHHHHHHHHHHHHHHhCCCC-------CCeEEE
Confidence 3322 2 112211 11122333444 456665543 23446678999999999999999998632 466778
Q ss_pred EEEeCCceeccCCCCCC----CCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhhhh
Q 016397 311 VVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 375 (390)
Q Consensus 311 ~~~~~~a~~~~~~g~~~----~~~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~~~ 375 (390)
+++|+++.+.+.+|+.. .++.+.++.+||||||+++.+ .+|++|+.||+++|++|+..++..
T Consensus 403 v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g---~g~~~a~~sG~~aA~~i~~~l~~~ 468 (475)
T 3lov_A 403 ISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDG---VGLPDCVASAKTMIESIELEQSHT 468 (475)
T ss_dssp EEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSC---SSHHHHHHHHHHHHHHHHHTC---
T ss_pred EEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCC---CCHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999998888888631 122233457899999999875 589999999999999999887654
No 7
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.96 E-value=2.4e-29 Score=247.56 Aligned_cols=330 Identities=16% Similarity=0.146 Sum_probs=226.2
Q ss_pred CCCChhhHHHHHcCCCCCCHHHHHHhhhhhHHHHhcccc-ccccccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCCc
Q 016397 21 LPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQA-YVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINP 99 (390)
Q Consensus 21 ~~~P~~~~~~ll~~~~~ls~~~k~r~~~~~~~~~~~~~~-~~~~~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~~ 99 (390)
.+.|.+.. .+++. ..+++.+|++++...+ ...... .....+++|+.+|++++ ++++.++.+++|++.++++.++
T Consensus 107 ~~~p~~~~-~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~ 181 (504)
T 1sez_A 107 VLLPSNPI-DLIKS-NFLSTGSKLQMLLEPI--LWKNKKLSQVSDSHESVSGFFQRH-FGKEVVDYLIDPFVAGTCGGDP 181 (504)
T ss_dssp EECCSSHH-HHHHS-SSSCHHHHHHHHTHHH--HC----------CCCBHHHHHHHH-HCHHHHHTTHHHHHHHHHSCCG
T ss_pred EECCCCHH-HHhcc-ccCCHHHHHHHhHhhh--ccCcccccccCCCCccHHHHHHHH-cCHHHHHHHHHHHHccccCCCh
Confidence 34555544 66666 6899999988764322 111100 00124679999999998 9999999999999999998999
Q ss_pred ccccHHHHHHHHHHH---------------hccc---------------CCceEEeecCCCCccchHHHHHHHHHcC-cE
Q 016397 100 DELSMQCILIALNRF---------------LQEK---------------HGSKMAFLDGNPPERLCLPIVEHIQSLG-GE 148 (390)
Q Consensus 100 ~~~Sa~~~~~~l~~~---------------~~~~---------------~~~~~~~~~GG~~~~l~~~l~~~l~~~G-~~ 148 (390)
+++|+.+++..+..+ +... ......+++||+ +.|+++|++.| | ++
T Consensus 182 ~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~-~~l~~~l~~~l---~~~~ 257 (504)
T 1sez_A 182 DSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGM-QTLTDAICKDL---REDE 257 (504)
T ss_dssp GGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCT-HHHHHHHHTTS---CTTT
T ss_pred HHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEeeCcHH-HHHHHHHHhhc---ccce
Confidence 999998765433221 1000 011356789997 89999998765 5 78
Q ss_pred EEcCceeeEEEECCCCC-----EEEEEEc--CC---eEEEcCEEEEecChhhHhhhcCc---chhccHHHHHhhcCCCcc
Q 016397 149 VRLNSRVQKIELNDDGT-----VKNFLLT--NG---NVIDGDAYVFATPVDILKLQLPE---NWKEMAYFKRLEKLVGVP 215 (390)
Q Consensus 149 I~l~~~V~~I~~~~~g~-----v~~V~~~--~g---~~~~ad~VI~a~p~~~~~~ll~~---~~~~~~~~~~~~~l~~~~ 215 (390)
|++|++|++|..++++. + .|++. +| ++++||+||+|+|+..+.+++.+ ...+.+ .+.++.+.+
T Consensus 258 i~~~~~V~~I~~~~~~~~~~~~~-~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~---~l~~~~~~~ 333 (504)
T 1sez_A 258 LRLNSRVLELSCSCTEDSAIDSW-SIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLN---FIPEVDYVP 333 (504)
T ss_dssp EETTCCEEEEEEECSSSSSSCEE-EEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCCCT---TSCCCCEEE
T ss_pred EEcCCeEEEEEecCCCCcccceE-EEEEcCCCCccceeEECCEEEECCCHHHHHHHhhcccCCcccHH---HHhcCCCCc
Confidence 99999999999865552 3 46654 45 57899999999999999998731 101111 256778889
Q ss_pred EEEEEEEeCccccc-cCC--ceeecC-C-----CcchhhhhcccccccccCCCCcEEEEEec--CCCCCCCCCHHHHHHH
Q 016397 216 VINIHIWFDRKLKN-TYD--HLLFSR-S-----SLLSVYADMSLTCKEYYNPNQSMLELVFA--PAEEWISCSDSEIIDA 284 (390)
Q Consensus 216 ~~~v~l~~~~~~~~-~~~--~~~~~~-~-----~~~~~~~~~s~~~~~~a~~g~~ll~~~~~--~~~~~~~~~~ee~~~~ 284 (390)
+.+|++.|++++|. ... ++++.. . .+.++.. .+...+..+|++..++.+... ....|..++++++++.
T Consensus 334 ~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~-~s~~~~~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~ 412 (504)
T 1sez_A 334 LSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLF-SSMMFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEI 412 (504)
T ss_dssp EEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEE-HHHHCGGGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHH
T ss_pred eEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEe-eccccCCcCCCCCEEEEEEeCCCCcccccCCCHHHHHHH
Confidence 99999999998764 221 222321 1 1222211 122344456666666654443 2345677899999999
Q ss_pred HHHHHHHhCCCCccccccCceEEEEEEEEeCCceeccCCCCCCCC---CCCCCCCCCeEEecccccCCCCCchhHHHHHH
Q 016397 285 TMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR---PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSG 361 (390)
Q Consensus 285 ~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~---~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG 361 (390)
++++|++++|... ++....+.+|+++.+.+.+|+.... ....++++||||||+++.+ .++++|+.||
T Consensus 413 v~~~L~~~~g~~~-------~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~g---~~v~gai~sG 482 (504)
T 1sez_A 413 VTSDLKQLLGAEG-------EPTYVNHLYWSKAFPLYGHNYDSVLDAIDKMEKNLPGLFYAGNHRGG---LSVGKALSSG 482 (504)
T ss_dssp HHHHHHHHHCBCS-------CCSSEEEEEEEEEEECCCTTHHHHHHHHHHHHHHSTTEEECCSSSSC---SSHHHHHHHH
T ss_pred HHHHHHHHhCCCC-------CCeEEEEeECCCCCCccCcCHHHHHHHHHHHHHhCCCEEEEeecCCC---CCHHHHHHHH
Confidence 9999999998632 3556678899988888888753211 1123457899999999874 6899999999
Q ss_pred HHHHHHHHHHhhh
Q 016397 362 KLCAQAIVQDYVL 374 (390)
Q Consensus 362 ~~aA~~il~~~~~ 374 (390)
++||++|++.++.
T Consensus 483 ~~aA~~il~~l~~ 495 (504)
T 1sez_A 483 CNAADLVISYLES 495 (504)
T ss_dssp HHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998754
No 8
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.96 E-value=3.7e-28 Score=237.48 Aligned_cols=291 Identities=15% Similarity=0.142 Sum_probs=216.6
Q ss_pred cccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHH-----------hcc--------------
Q 016397 63 AQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-----------LQE-------------- 117 (390)
Q Consensus 63 ~~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~-----------~~~-------------- 117 (390)
..+++|+.+|++++ +++++.+++++|++.++|+.+++++|+.+++..+... +..
T Consensus 140 ~~~~~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~ 218 (477)
T 3nks_A 140 KEPDETVHSFAQRR-LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQ 218 (477)
T ss_dssp CSSCCBHHHHHHHH-HCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHH
T ss_pred CCCCcCHHHHHHHh-hCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhh
Confidence 35789999999997 8999999999999999999999999999986654321 000
Q ss_pred --cCCceEEeecCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhHhhhc
Q 016397 118 --KHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL 195 (390)
Q Consensus 118 --~~~~~~~~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~~~ll 195 (390)
..+..+.+++||+ +.|+++|++.+++.|++|+++++|++|..++++.+ .|++ +|++++||+||+|+|++.+.+|+
T Consensus 219 ~~~~~~~~~~~~gG~-~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~-~v~~-~~~~~~ad~vv~a~p~~~~~~ll 295 (477)
T 3nks_A 219 ALAERWSQWSLRGGL-EMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRW-KVSL-RDSSLEADHVISAIPASVLSELL 295 (477)
T ss_dssp HHHTTCSEEEETTCT-THHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCE-EEEC-SSCEEEESEEEECSCHHHHHHHS
T ss_pred hcccCccEEEECCCH-HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceE-EEEE-CCeEEEcCEEEECCCHHHHHHhc
Confidence 1122467889998 89999999999999999999999999998654424 4766 55579999999999999999998
Q ss_pred CcchhccHHHHHhhcCCCccEEEEEEEeCccccc--cCCceeecC---CCcchhhhhccccccccc-CCCCcEEEEEecC
Q 016397 196 PENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKN--TYDHLLFSR---SSLLSVYADMSLTCKEYY-NPNQSMLELVFAP 269 (390)
Q Consensus 196 ~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~--~~~~~~~~~---~~~~~~~~~~s~~~~~~a-~~g~~ll~~~~~~ 269 (390)
++. +.+..+.+.++.|.++.++++.|++++|. ++ +++... ....++.++.+ ..+... +++.++++++++.
T Consensus 296 ~~~--~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~-g~l~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~l~~~~gg 371 (477)
T 3nks_A 296 PAE--AAPLARALSAITAVSVAVVNLQYQGAHLPVQGF-GHLVPSSEDPGVLGIVYDSV-AFPEQDGSPPGLRVTVMLGG 371 (477)
T ss_dssp CGG--GHHHHHHHHTCCEEEEEEEEEEETTCCCSSCSS-EEECCTTTCSSEEEEECHHH-HCGGGSTTTTCEEEEEEECH
T ss_pred ccc--CHHHHHHHhcCCCCcEEEEEEEECCCCCCCCCc-eEEccCCCCCCceEEEEecc-ccCCCCCCCCceEEEEEECC
Confidence 864 23566778889999999999999998773 22 333322 22233322222 223322 3366777766542
Q ss_pred C--C----CCCCCCHHHHHHHHHHHHHHhCCCCccccccCceEEEEEEEEeCCceeccCCCCCCCC----CCCCCCCCCe
Q 016397 270 A--E----EWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR----PLQRSPVEGF 339 (390)
Q Consensus 270 ~--~----~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~----~~~~~~~~~l 339 (390)
. . ....++++++++.++++|.++++... ++..+.+++|+++.+++.+|+.... ..+....+||
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~-------~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l 444 (477)
T 3nks_A 372 SWLQTLEASGCVLSQELFQQRAQEAAATQLGLKE-------MPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPL 444 (477)
T ss_dssp HHHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCCS-------CCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSE
T ss_pred ccccccccccCCCCHHHHHHHHHHHHHHHhCCCC-------CCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 1 1 11246899999999999999997532 4567789999999999988864211 1111123689
Q ss_pred EEecccccCCCCCchhHHHHHHHHHHHHHHHH
Q 016397 340 YLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 371 (390)
Q Consensus 340 ~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~ 371 (390)
++||||+.+ .++++|+.||++||++|+++
T Consensus 445 ~l~G~~~~G---~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 445 TLAGASYEG---VAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp EECSTTTSC---CSHHHHHHHHHHHHHHHHHC
T ss_pred EEEccCCCC---CcHHHHHHHHHHHHHHHHhc
Confidence 999999865 68999999999999999874
No 9
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.96 E-value=2.4e-28 Score=239.85 Aligned_cols=292 Identities=11% Similarity=0.062 Sum_probs=209.7
Q ss_pred ccccCccHHHHHHHcC--CChHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHHhcc----cCCceEEeecCCCCccch
Q 016397 62 EAQDGLTVQEWMRKQG--VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE----KHGSKMAFLDGNPPERLC 135 (390)
Q Consensus 62 ~~~d~~s~~e~l~~~g--~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~----~~~~~~~~~~GG~~~~l~ 135 (390)
..++++|+.+|+++.+ +++. .+.++++++..+++.+++++|+.+++..+...... ........+.||+ +.|+
T Consensus 181 ~~~~~~s~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~-~~l~ 258 (495)
T 2vvm_A 181 RKYDEMSYSERIDQIRDELSLN-ERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQ-SAFA 258 (495)
T ss_dssp HHHHTSBHHHHHHHHGGGCCHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCH-HHHH
T ss_pred hhhhhhhHHHHHHHhhccCCHH-HHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCH-HHHH
Confidence 4467899999999986 6665 46799999998888899999999887654321100 0011345678997 8999
Q ss_pred HHHHHHHHHcC-cEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhHhhhcCcchhccHHHHHhhcCCCc
Q 016397 136 LPIVEHIQSLG-GEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGV 214 (390)
Q Consensus 136 ~~l~~~l~~~G-~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~~l~~~ 214 (390)
++|++.+++.| ++|+++++|++|..++++ + .|++.+|++++||+||+|+|+..+.+|.-....+....++++.+.+.
T Consensus 259 ~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp~~~~~ai~~~~~~ 336 (495)
T 2vvm_A 259 RRFWEEAAGTGRLGYVFGCPVRSVVNERDA-A-RVTARDGREFVAKRVVCTIPLNVLSTIQFSPALSTERISAMQAGHVS 336 (495)
T ss_dssp HHHHHHHHTTTCEEEESSCCEEEEEECSSS-E-EEEETTCCEEEEEEEEECCCGGGGGGSEEESCCCHHHHHHHHHCCCC
T ss_pred HHHHHHhhhcCceEEEeCCEEEEEEEcCCE-E-EEEECCCCEEEcCEEEECCCHHHHhheeeCCCCCHHHHHHHHhcCCC
Confidence 99999999888 999999999999986444 6 48888888899999999999999998842211344566778889999
Q ss_pred cEEEEEEEeCccccccCCceeecCCCcchhhhhcccccccccCCCCcEEEEEecCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 016397 215 PVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFP 294 (390)
Q Consensus 215 ~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~a~~g~~ll~~~~~~~~~~~~~~~ee~~~~~~~~l~~~~p 294 (390)
++.+|++.|++++|.++.++...+.++..++. ....|.+..++......... +++++..+.++++|++++|
T Consensus 337 ~~~kv~l~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~vl~~~~~~~~~---~~~~e~~~~~~~~L~~~~~ 407 (495)
T 2vvm_A 337 MCTKVHAEVDNKDMRSWTGIAYPFNKLCYAIG------DGTTPAGNTHLVCFGNSANH---IQPDEDVRETLKAVGQLAP 407 (495)
T ss_dssp CCEEEEEEESCGGGGGEEEEECSSCSSCEEEE------EEECTTSCEEEEEEECSTTC---CCTTTCHHHHHHHHHTTST
T ss_pred ceeEEEEEECCccCCCceeEecCCCCcEEEec------CCCCCCCCeEEEEEeCcccc---CCCHHHHHHHHHHHHHhcC
Confidence 99999999999887543333333333322221 11134444555543332222 4555677889999999988
Q ss_pred CCccccccCceEEEEEEEEeCC-----ceec-cCCCCC-CCCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHH
Q 016397 295 DEISADQSKAKIVKYHVVKTPR-----SVYK-TIPNCE-PCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 367 (390)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~-----a~~~-~~~g~~-~~~~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~ 367 (390)
... ++....+++|.. +.|. +.||+. ..++.+++|.+||||||++++..|+++|+||+.||++||++
T Consensus 408 ~~~-------~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~ 480 (495)
T 2vvm_A 408 GTF-------GVKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWRSFIDGAIEEGTRAARV 480 (495)
T ss_dssp TSC-------CEEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHH
T ss_pred CCC-------CceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCceEEEhHHHHHHHHHHH
Confidence 632 466777788853 3333 445642 22334456788999999999987888999999999999999
Q ss_pred HHHHhh
Q 016397 368 IVQDYV 373 (390)
Q Consensus 368 il~~~~ 373 (390)
|++.++
T Consensus 481 i~~~l~ 486 (495)
T 2vvm_A 481 VLEELG 486 (495)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 998875
No 10
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.96 E-value=1.8e-28 Score=238.05 Aligned_cols=290 Identities=14% Similarity=0.134 Sum_probs=206.6
Q ss_pred cccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCCcc-cccHHHHHHHHHHHhc-----ccCCceEEeecCCCCccchH
Q 016397 63 AQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPD-ELSMQCILIALNRFLQ-----EKHGSKMAFLDGNPPERLCL 136 (390)
Q Consensus 63 ~~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~~~-~~Sa~~~~~~l~~~~~-----~~~~~~~~~~~GG~~~~l~~ 136 (390)
.++++|+.+|++++ +.++.++.++++++.+.++.+++ ++|+.+++..+..... ...+....++.||+ +.|++
T Consensus 142 ~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~-~~l~~ 219 (453)
T 2yg5_A 142 DLDTVSFKQWLINQ-SDDAEARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGGM-QQVSI 219 (453)
T ss_dssp HHHSSBHHHHHHHH-CSCHHHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCT-HHHHH
T ss_pred hhhhccHHHHHHhh-cCCHHHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCCh-HHHHH
Confidence 46789999999998 45666777999999888888998 9999988765533100 00112346789997 89999
Q ss_pred HHHHHHHHcCcEEEcCceeeEEEECCCCC-EEEEEEcCCeEEEcCEEEEecChhhHhhhcCcchhccHHHHHhhcCCCcc
Q 016397 137 PIVEHIQSLGGEVRLNSRVQKIELNDDGT-VKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVP 215 (390)
Q Consensus 137 ~l~~~l~~~G~~I~l~~~V~~I~~~~~g~-v~~V~~~~g~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~~l~~~~ 215 (390)
+|++.+ |++|++|++|++|..++ +. + .|++ +|++++||+||+|+|+..+.+|+.....+....++++++.+.+
T Consensus 220 ~l~~~l---g~~i~~~~~V~~i~~~~-~~~v-~v~~-~~~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~~~~i~~~~~~~ 293 (453)
T 2yg5_A 220 RMAEAL---GDDVFLNAPVRTVKWNE-SGAT-VLAD-GDIRVEASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQSLGL 293 (453)
T ss_dssp HHHHHH---GGGEECSCCEEEEEEET-TEEE-EEET-TTEEEEEEEEEECSCGGGGGGSEEESCCCHHHHHHGGGEEECC
T ss_pred HHHHhc---CCcEEcCCceEEEEEeC-CceE-EEEE-CCeEEEcCEEEEcCCHHHHhcCEeCCCCCHHHHHHHhcCCCcc
Confidence 999876 78999999999999854 44 4 3665 6788999999999999999888633223445567788888889
Q ss_pred EEEEEEEeCcccccc--CCceeecC-CCcchhhhhcccccccccCCC-CcEEEEEe-c-CCCCCCCCCHHHHHHHHHHHH
Q 016397 216 VINIHIWFDRKLKNT--YDHLLFSR-SSLLSVYADMSLTCKEYYNPN-QSMLELVF-A-PAEEWISCSDSEIIDATMKEL 289 (390)
Q Consensus 216 ~~~v~l~~~~~~~~~--~~~~~~~~-~~~~~~~~~~s~~~~~~a~~g-~~ll~~~~-~-~~~~~~~~~~ee~~~~~~~~l 289 (390)
+.++++.|++++|.. +.+.++.. .++..++ +.+ .+++ ..++.+.+ . .++.|..++++++++.++++|
T Consensus 294 ~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~-~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L 366 (453)
T 2yg5_A 294 VIKVHAVYETPFWREDGLSGTGFGASEVVQEVY-DNT------NHEDDRGTLVAFVSDEKADAMFELSAEERKATILASL 366 (453)
T ss_dssp EEEEEEEESSCGGGGGTEEEEEECTTSSSCEEE-ECC------CTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred eEEEEEEECCCCCCCCCCCceeecCCCCeEEEE-eCC------CCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHH
Confidence 999999999998742 22233322 2222221 111 2333 34444333 2 234566778999999999999
Q ss_pred HHhCCCCccccccCceEEEEEEEEeCC-----cee--ccCCCCC-CCCCCCCCCCCCeEEecccccCCCCCchhHHHHHH
Q 016397 290 AKLFPDEISADQSKAKIVKYHVVKTPR-----SVY--KTIPNCE-PCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSG 361 (390)
Q Consensus 290 ~~~~p~~~~~~~~~~~~~~~~~~~~~~-----a~~--~~~~g~~-~~~~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG 361 (390)
++++|... ..++.+...+|.. +.| .+.||+. ..++..++|++||||||++++..|+++++||+.||
T Consensus 367 ~~~~~~~~------~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG 440 (453)
T 2yg5_A 367 ARYLGPKA------EEPVVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMG 440 (453)
T ss_dssp HHHHCGGG------GCCSEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTTSHHHHHHHH
T ss_pred HHHhCccC------CCccEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccccchHHHHHHH
Confidence 99998522 2355666777753 332 2355532 22345678899999999999887888999999999
Q ss_pred HHHHHHHHHHhh
Q 016397 362 KLCAQAIVQDYV 373 (390)
Q Consensus 362 ~~aA~~il~~~~ 373 (390)
++||++|++.++
T Consensus 441 ~~aA~~i~~~l~ 452 (453)
T 2yg5_A 441 QRTAADIIARSK 452 (453)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHHhc
Confidence 999999998753
No 11
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.94 E-value=1.4e-25 Score=220.54 Aligned_cols=289 Identities=19% Similarity=0.195 Sum_probs=164.7
Q ss_pred ccHHHHHHHcCCChHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHHhcccCCceEEeecCCCCccchHHHHHHHHHcC
Q 016397 67 LTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLG 146 (390)
Q Consensus 67 ~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~~~~~~~~~~~GG~~~~l~~~l~~~l~~~G 146 (390)
.|+.+++.++ +.++.++.++...... ++.++.+.++.+.+. ... .... ...+|+||+ +.|+++|++.++++|
T Consensus 164 ~~~~~~~~~~-~~~~~l~~~l~~~~~~-~g~~p~~~~~~~~~~--~~~-~~~~--G~~~p~GG~-~~l~~aL~~~~~~~G 235 (501)
T 4dgk_A 164 RSVYSKVASY-IEDEHLRQAFSFHSLL-VGGNPFATSSIYTLI--HAL-EREW--GVWFPRGGT-GALVQGMIKLFQDLG 235 (501)
T ss_dssp HHHHHHHHTT-CCCHHHHHHHHHHHHH-HHSCC--CCCTHHHH--HHH-HSCC--CEEEETTHH-HHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHH-hccHHHHhhhhhhhcc-cCCCcchhhhhhhhh--hhh-hccC--CeEEeCCCC-cchHHHHHHHHHHhC
Confidence 4788889888 7777777777654433 245566655544332 111 1122 356899997 899999999999999
Q ss_pred cEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh-hHhhhcCcchhccHHHHHhhcCCCc-cEEEEEEEeC
Q 016397 147 GEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD-ILKLQLPENWKEMAYFKRLEKLVGV-PVINIHIWFD 224 (390)
Q Consensus 147 ~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~-~~~~ll~~~~~~~~~~~~~~~l~~~-~~~~v~l~~~ 224 (390)
++|++|++|++|..+ ++++++|+++||+++.||+||+++++. ++..|+++...+....+.+++.++. +..++++.++
T Consensus 236 g~I~~~~~V~~I~~~-~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~ 314 (501)
T 4dgk_A 236 GEVVLNARVSHMETT-GNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAAVKQSNKLQTKRMSNSLFVLYFGLN 314 (501)
T ss_dssp CEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSCEEECCC---------------------------CCEEEEEEEEES
T ss_pred CceeeecceeEEEee-CCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccchhhhhhhhccccCCceeEEEeccc
Confidence 999999999999995 567888999999999999999988765 5567777643343445556666665 5788999998
Q ss_pred ccccc-cCCceeecCCC---cc------------hhh-hhcccccccccCCCCcEEEEEe-cCCCCCCCC----CHHHHH
Q 016397 225 RKLKN-TYDHLLFSRSS---LL------------SVY-ADMSLTCKEYYNPNQSMLELVF-APAEEWISC----SDSEII 282 (390)
Q Consensus 225 ~~~~~-~~~~~~~~~~~---~~------------~~~-~~~s~~~~~~a~~g~~ll~~~~-~~~~~~~~~----~~ee~~ 282 (390)
++... ....+++..+. +. .++ ...+..+++++|+|++.+.+.. .+...+.+. .++++.
T Consensus 315 ~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 394 (501)
T 4dgk_A 315 HHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHLGTANLDWTVEGPKLR 394 (501)
T ss_dssp SCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCTTTSCCCHHHHHHHHH
T ss_pred CCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCccccccccHHHHHHHHH
Confidence 87542 22223332110 00 010 1123356778999988766432 333222222 246778
Q ss_pred HHHHHHHHHh-CCCCccccccCceEEEEEEEEeCCc-----------eeccCCC--C-CCCCCCC-CCCCCCeEEecccc
Q 016397 283 DATMKELAKL-FPDEISADQSKAKIVKYHVVKTPRS-----------VYKTIPN--C-EPCRPLQ-RSPVEGFYLAGDYT 346 (390)
Q Consensus 283 ~~~~~~l~~~-~p~~~~~~~~~~~~~~~~~~~~~~a-----------~~~~~~g--~-~~~~~~~-~~~~~~l~~aGd~~ 346 (390)
+++++.|++. +|++.+ .++...+ .+|.. .|...+. + ...||.. .+|++|||+||+++
T Consensus 395 ~~vl~~l~~~~~P~~~~------~i~~~~~-~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~i~gLyl~G~~t 467 (501)
T 4dgk_A 395 DRIFAYLEQHYMPGLRS------QLVTHRM-FTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKTITNLYLVGAGT 467 (501)
T ss_dssp HHHHHHHHHHTCTTHHH------HEEEEEE-ECTTTTC------------------------------CCTTEEECCCH-
T ss_pred HHHHHHHHHhhCCChHH------ceEEEEE-CCHHHHHHHcCCCCccccChhcchhhccccCCCCCCCCCCCEEEECCCC
Confidence 8899999875 587652 3443333 23321 1222221 1 1245544 47899999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHHhh
Q 016397 347 KQKYLASMEGAVLSGKLCAQAIVQDYV 373 (390)
Q Consensus 347 ~~~~~~~~~gA~~SG~~aA~~il~~~~ 373 (390)
.++ +|++||+.||+.||++|++++.
T Consensus 468 ~pG--~Gv~ga~~SG~~aA~~il~dL~ 492 (501)
T 4dgk_A 468 HPG--AGIPGVIGSAKATAGLMLEDLI 492 (501)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHC
T ss_pred CCc--ccHHHHHHHHHHHHHHHHHHhc
Confidence 876 7999999999999999999883
No 12
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.93 E-value=3.6e-26 Score=223.14 Aligned_cols=312 Identities=13% Similarity=0.091 Sum_probs=221.9
Q ss_pred CCCHHHHHHhhhhhHHHHhccccccccccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCCcccccHHHHHH-------
Q 016397 37 MLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILI------- 109 (390)
Q Consensus 37 ~ls~~~k~r~~~~~~~~~~~~~~~~~~~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~------- 109 (390)
.++..++.+++..++.... .....+++|+.+|+.++ +++++++.+++|++.++|+.+++++|+.++..
T Consensus 111 ~l~~~~~~~~~~~ll~~~~----~~~~~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l 185 (484)
T 4dsg_A 111 RLPEQDRKRCLDELVRSHA----RTYTEPPNNFEESFTRQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDL 185 (484)
T ss_dssp GSCHHHHHHHHHHHHHHHH----CCCSSCCSSHHHHHHHH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCH
T ss_pred hCCHHHHHHHHHHHHHHHh----ccCCCCCCCHHHHHHHH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCH
Confidence 4677777776655554311 12335789999999999 99999999999999999999999999976432
Q ss_pred --HHHHHhccc------CCceEEee-cCCCCccchHHHHHHHHHcCcEEEcC--ceeeEEEECCCCCEEEEEEcCCeEEE
Q 016397 110 --ALNRFLQEK------HGSKMAFL-DGNPPERLCLPIVEHIQSLGGEVRLN--SRVQKIELNDDGTVKNFLLTNGNVID 178 (390)
Q Consensus 110 --~l~~~~~~~------~~~~~~~~-~GG~~~~l~~~l~~~l~~~G~~I~l~--~~V~~I~~~~~g~v~~V~~~~g~~~~ 178 (390)
.+...+... ....+.|| +||+ ++|+++|++.+.+ .+|+++ ++|++|..+ ++. |++.+|+++.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~-~~l~~~la~~l~~--~~i~~~~~~~V~~I~~~-~~~---v~~~~G~~~~ 258 (484)
T 4dsg_A 186 ERIRRNIQENRDDLGWGPNATFRFPQRGGT-GIIYQAIKEKLPS--EKLTFNSGFQAIAIDAD-AKT---ITFSNGEVVS 258 (484)
T ss_dssp HHHHHHHHHTCCCCCCSTTSEEEEESSSCT-HHHHHHHHHHSCG--GGEEECGGGCEEEEETT-TTE---EEETTSCEEE
T ss_pred HHHHHHHhhcccccCCCccceEEeecCCCH-HHHHHHHHhhhhh--CeEEECCCceeEEEEec-CCE---EEECCCCEEE
Confidence 223332211 12346777 5897 8999999988743 289999 569999985 443 4567888899
Q ss_pred cCEEEEecChhhHhhhcCc--chhccHHHHHhhcCCCccEEEEEEEeCccccc---cCCceeecCC--Ccchhhhhcccc
Q 016397 179 GDAYVFATPVDILKLQLPE--NWKEMAYFKRLEKLVGVPVINIHIWFDRKLKN---TYDHLLFSRS--SLLSVYADMSLT 251 (390)
Q Consensus 179 ad~VI~a~p~~~~~~ll~~--~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~---~~~~~~~~~~--~~~~~~~~~s~~ 251 (390)
||+||+|+|++.+.+++++ ...+....+.+.+++|.++.+|++.|+++... +..++.+.+. ++..+. .+++.
T Consensus 259 ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri~-~~s~~ 337 (484)
T 4dsg_A 259 YDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRAT-VFSNY 337 (484)
T ss_dssp CSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEEE-CGGGT
T ss_pred CCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEEE-eecCC
Confidence 9999999999999999854 11244566778899999999999999886422 1123333332 222221 23445
Q ss_pred cccccCCCCcEEEEEecCCCCCCCCCHHHHHHHHHHHHHHhCCCCccccccCceEEEEEEEEeCCceeccCCCCCC----
Q 016397 252 CKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP---- 327 (390)
Q Consensus 252 ~~~~a~~g~~ll~~~~~~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~---- 327 (390)
+++.+|++++++.+.++.. .....+++++++.++++|.++..... +..+...++.+|+.+.|++.+|+..
T Consensus 338 ~p~~ap~g~~~l~~e~~~~-~~~~~~d~~l~~~a~~~L~~~~~~~~-----~~~~~~~~v~r~~~~yP~y~~~~~~~~~~ 411 (484)
T 4dsg_A 338 SKYNVPEGHWSLMLEVSES-KYKPVNHSTLIEDCIVGCLASNLLLP-----EDLLVSKWHYRIEKGYPTPFIGRNNLLEK 411 (484)
T ss_dssp CGGGSCTTEEEEEEEEEEB-TTBCCCTTSHHHHHHHHHHHTTSCCT-----TCCEEEEEEEEEEEEEECCBTTHHHHHHH
T ss_pred CcccCCCCeEEEEEEEecC-cCCcCCHHHHHHHHHHHHHHcCCCCc-----cceEEEEEEEEeCccccCCCccHHHHHHH
Confidence 5666788877766555433 33367899999999999999864321 1235556789999999999998642
Q ss_pred CCCCCCCCCCCeEEecccccCCCC-CchhHHHHHHHHHHHHHH
Q 016397 328 CRPLQRSPVEGFYLAGDYTKQKYL-ASMEGAVLSGKLCAQAIV 369 (390)
Q Consensus 328 ~~~~~~~~~~~l~~aGd~~~~~~~-~~~~gA~~SG~~aA~~il 369 (390)
.++.+.. . ||+++|.+....|. .+|+.|+.||.+||++|+
T Consensus 412 ~~~~l~~-~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 412 AQPELMS-R-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp HHHHHHH-T-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHh-C-CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 2222222 3 99999998877774 379999999999999998
No 13
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.92 E-value=1.2e-25 Score=221.61 Aligned_cols=313 Identities=12% Similarity=0.129 Sum_probs=216.6
Q ss_pred CCHHHHHHhhhhhHHHHhccccccccccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCCcccccHHHHHHHH------
Q 016397 38 LTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIAL------ 111 (390)
Q Consensus 38 ls~~~k~r~~~~~~~~~~~~~~~~~~~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l------ 111 (390)
++..++.+....++..... ......+..|+.+|+.++ +++++++.++.|++.++|+.+++++|+.++...+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~ 192 (513)
T 4gde_A 116 LPKEEQVKCIDGMIDAALE--ARVANTKPKTFDEWIVRM-MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLK 192 (513)
T ss_dssp SCHHHHHHHHHHHHHHHHH--HHTCCSCCCSHHHHHHHH-HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHH
T ss_pred cchhhHHHHHHHHHHHHHh--hhcccccccCHHHHHHHh-hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchh
Confidence 4555665555444433211 112345678999999998 9999999999999999999999999987654321
Q ss_pred ---HHHh-cc-----cCCceEEee-cCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCE
Q 016397 112 ---NRFL-QE-----KHGSKMAFL-DGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDA 181 (390)
Q Consensus 112 ---~~~~-~~-----~~~~~~~~~-~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~ 181 (390)
...+ .. .....+.++ +||+ +.|+++|++.|++.|++|+++++|++|..+ +++ |++.||+++.||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~gG~-~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~-~~~---v~~~~G~~~~ad~ 267 (513)
T 4gde_A 193 AVTTNVILGKTAGNWGPNATFRFPARGGT-GGIWIAVANTLPKEKTRFGEKGKVTKVNAN-NKT---VTLQDGTTIGYKK 267 (513)
T ss_dssp HHHHHHHHTCCCCSCBTTBEEEEESSSHH-HHHHHHHHHTSCGGGEEESGGGCEEEEETT-TTE---EEETTSCEEEEEE
T ss_pred hhhhhhhhcccccccccccceeecccCCH-HHHHHHHHHHHHhcCeeeecceEEEEEEcc-CCE---EEEcCCCEEECCE
Confidence 1111 10 011234444 8997 899999999999999999999999999974 442 6678999999999
Q ss_pred EEEecChhhHhhhcCcchhccHHHHHhhcCCCccEEEEEEEeCcccccc--CCceee-cCC--Ccchhhhhccccccccc
Q 016397 182 YVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT--YDHLLF-SRS--SLLSVYADMSLTCKEYY 256 (390)
Q Consensus 182 VI~a~p~~~~~~ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~--~~~~~~-~~~--~~~~~~~~~s~~~~~~a 256 (390)
||+|+|++.+.+++++. +.......++|.++.+|.+.++...... ...+++ .+. ++..+. .+++.++...
T Consensus 268 vI~t~P~~~l~~~l~~~----~~~~~~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~-~~~n~sp~~~ 342 (513)
T 4gde_A 268 LVSTMAVDFLAEAMNDQ----ELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRAT-IFSNYSPYNQ 342 (513)
T ss_dssp EEECSCHHHHHHHTTCH----HHHHHHTTCCEEEEEEEEEEEESSCCTTTTTCCEEECCSTTCSCSEEE-CGGGTCGGGS
T ss_pred EEECCCHHHHHHhcCch----hhHhhhhcccCCceEEEEEEEeccccccccccceeeccCCCCceeEEE-ecCCCCcccC
Confidence 99999999999998753 3345667889999999999997754321 122332 221 221110 1111222222
Q ss_pred CCCC---------------------cEEEEEe-c-CCCCCCCCCHHHHHHHHHHHHHHhCCCCccccccCceEEEEEEEE
Q 016397 257 NPNQ---------------------SMLELVF-A-PAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVK 313 (390)
Q Consensus 257 ~~g~---------------------~ll~~~~-~-~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~ 313 (390)
|++. .++...+ . ..+.+..+++|++++.++++|.++.+... ..+++...+.|
T Consensus 343 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~-----~~~i~~~~v~r 417 (513)
T 4gde_A 343 PEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKP-----TDEIVSTYHRR 417 (513)
T ss_dssp CCTTCCEECCEETTSCCCSCCSEECCCEEEEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCT-----TCEEEEEEEEE
T ss_pred CCCCceEEEEEeccCCCcccccCCcceEEEEEecccchhccCCCHHHHHHHHHHHHHHhcCCCC-----ccceEEEEEEE
Confidence 2221 1122111 1 22445578999999999999999987543 34688899999
Q ss_pred eCCceeccCCCCCC----CCCCCCCCCCCeEEecccccCCCC-CchhHHHHHHHHHHHHHHH
Q 016397 314 TPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYTKQKYL-ASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 314 ~~~a~~~~~~g~~~----~~~~~~~~~~~l~~aGd~~~~~~~-~~~~gA~~SG~~aA~~il~ 370 (390)
||++.|++..|+.. .++.+.. +|||++|......|. +.|+.|+.+|..||+.|+.
T Consensus 418 ~~~ayP~y~~~~~~~~~~~~~~l~~--~~l~~~GR~g~~~Y~~~n~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 418 FDHGYPTPTLEREGTLTQILPKLQD--KDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp EEEEEECCBTTHHHHHHHHHHHHHH--TTEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred CCCeecccCHhHHHHHHHHHHHHhh--cCcEEecCCcccCcCCCCHHHHHHHHHHHHHHHHc
Confidence 99999999888642 2222222 599999988877774 5799999999999999986
No 14
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.91 E-value=2.1e-24 Score=210.47 Aligned_cols=297 Identities=16% Similarity=0.174 Sum_probs=194.9
Q ss_pred cccCccHHH--HHHHcCC--ChHHHHHHHHHHHH-hccCCCcccccHHHHHHHHHHHhcccCCceEEeecCCCCccchHH
Q 016397 63 AQDGLTVQE--WMRKQGV--PDRVTTEVFIAMSK-ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLP 137 (390)
Q Consensus 63 ~~d~~s~~e--~l~~~g~--~~~~~~~~~~p~~~-~~~~~~~~~~Sa~~~~~~l~~~~~~~~~~~~~~~~GG~~~~l~~~ 137 (390)
..+++|+.+ |+.+... ....++.++++++. ..++.+++..|+..+... ..+.....+..+..+.||+ +.|+++
T Consensus 134 ~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~~~~~~~gG~-~~l~~~ 211 (472)
T 1b37_A 134 GRDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVPL-ATFSDFGDDVYFVADQRGY-EAVVYY 211 (472)
T ss_dssp CTTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSSC-HHHHHHCSEEEEECCTTCT-THHHHH
T ss_pred cchhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhcccc-ccccccCCceeeeecCCcH-HHHHHH
Confidence 356778765 6766521 23334667777763 444556667775432210 1111101111233347997 899999
Q ss_pred HHHHHHHc--------CcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhHhhhcCc--chhccHHHHH
Q 016397 138 IVEHIQSL--------GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPE--NWKEMAYFKR 207 (390)
Q Consensus 138 l~~~l~~~--------G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~~~ll~~--~~~~~~~~~~ 207 (390)
|++.+.+. |++|+++++|++|..++++ ++ |++.+|++++||+||+|+|+..++.++.. ...+....++
T Consensus 212 l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~-v~-v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~a 289 (472)
T 1b37_A 212 LAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGG-VT-VKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRA 289 (472)
T ss_dssp HHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSC-EE-EEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHH
T ss_pred HHHhccccccccccccccEEEcCCEEEEEEEcCCc-EE-EEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHH
Confidence 99887654 6799999999999986544 64 88889988999999999999999886421 1234456677
Q ss_pred hhcCCCccEEEEEEEeCcccccc-CC--ceeecCCC--cchhhhhcccccccccCCCCcEEEEEec--CCCCCCCCCHHH
Q 016397 208 LEKLVGVPVINIHIWFDRKLKNT-YD--HLLFSRSS--LLSVYADMSLTCKEYYNPNQSMLELVFA--PAEEWISCSDSE 280 (390)
Q Consensus 208 ~~~l~~~~~~~v~l~~~~~~~~~-~~--~~~~~~~~--~~~~~~~~s~~~~~~a~~g~~ll~~~~~--~~~~~~~~~~ee 280 (390)
++++.+.++.+|++.|++++|.. .+ .+++.+.. ...++.. .++. .| +.+++.+.+. .+..|..+++++
T Consensus 290 i~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~p-~~~~l~~~~~~~~a~~~~~~~~~e 364 (472)
T 1b37_A 290 IYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYGVWQE---FEKQ-YP-DANVLLVTVTDEESRRIEQQSDEQ 364 (472)
T ss_dssp HHHSEEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSCEEEE---CTTT-ST-TCCEEEEEEEHHHHHHHHTSCHHH
T ss_pred HHhcCCcceeEEEEECCCcCCCCCCCcceEEecccCCccceeeec---ccCC-CC-CCCEEEEEechHHHHHHHhCCHHH
Confidence 88888999999999999999853 11 22222211 1111100 0111 23 4455554433 123466778999
Q ss_pred HHHHHHHHHHHhCCCCccccccCceEEEEEEEEeC-----Cceec-cCCCCCC-CCCCCCCCCCCeEEecccccCCCCCc
Q 016397 281 IIDATMKELAKLFPDEISADQSKAKIVKYHVVKTP-----RSVYK-TIPNCEP-CRPLQRSPVEGFYLAGDYTKQKYLAS 353 (390)
Q Consensus 281 ~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~-----~a~~~-~~~g~~~-~~~~~~~~~~~l~~aGd~~~~~~~~~ 353 (390)
+.+.++++|++++|+... .+++.+.+.+|. .+.|. ..+|+.. .++.+++|++||||||++++..|+++
T Consensus 365 ~~~~~l~~L~~~~Pg~~~-----~~~~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~g~ 439 (472)
T 1b37_A 365 TKAEIMQVLRKMFPGKDV-----PDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGY 439 (472)
T ss_dssp HHHHHHHHHHHHCTTSCC-----CCCSEEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTTTS
T ss_pred HHHHHHHHHHHHcCCCCC-----CCCceEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCCCc
Confidence 999999999999986421 134455566662 34443 4566542 23456778899999999999877789
Q ss_pred hhHHHHHHHHHHHHHHHHhh
Q 016397 354 MEGAVLSGKLCAQAIVQDYV 373 (390)
Q Consensus 354 ~~gA~~SG~~aA~~il~~~~ 373 (390)
|+||+.||++||++|++.++
T Consensus 440 v~GA~~SG~~aA~~i~~~l~ 459 (472)
T 1b37_A 440 VHGAYLSGIDSAEILINCAQ 459 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998764
No 15
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.90 E-value=9.8e-23 Score=190.40 Aligned_cols=227 Identities=15% Similarity=0.117 Sum_probs=164.3
Q ss_pred EeecCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhHhhhcCcc--hhc
Q 016397 124 AFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPEN--WKE 201 (390)
Q Consensus 124 ~~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~~~ll~~~--~~~ 201 (390)
....+|+ +.+.+.|++.+ |++|+++++|++|..++++ + .|++.+|+++++|.||+|+|++.+.+|+++. ..+
T Consensus 105 ~~~~~g~-~~l~~~l~~~~---g~~i~~~~~V~~i~~~~~~-~-~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~ 178 (342)
T 3qj4_A 105 FVAPQGI-SSIIKHYLKES---GAEVYFRHRVTQINLRDDK-W-EVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLIS 178 (342)
T ss_dssp EECTTCT-THHHHHHHHHH---TCEEESSCCEEEEEECSSS-E-EEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSC
T ss_pred eecCCCH-HHHHHHHHHhc---CCEEEeCCEEEEEEEcCCE-E-EEEECCCCEEEcCEEEECCCHHHHHHHhcccccccC
Confidence 4457887 88999998766 8999999999999996555 5 3888888778999999999999999998752 123
Q ss_pred cHHHHHhhcCCCccEEEEEEEeCccccc--cCCceeecCCC-cchhhhhccccccccc-CCCCcEEEEEec--CCCCCCC
Q 016397 202 MAYFKRLEKLVGVPVINIHIWFDRKLKN--TYDHLLFSRSS-LLSVYADMSLTCKEYY-NPNQSMLELVFA--PAEEWIS 275 (390)
Q Consensus 202 ~~~~~~~~~l~~~~~~~v~l~~~~~~~~--~~~~~~~~~~~-~~~~~~~~s~~~~~~a-~~g~~ll~~~~~--~~~~~~~ 275 (390)
....+.+.+++|.++.+|++.|++++|. ++.+++..+.+ +.+++.+.+. +... +++..++.+..+ .++++.+
T Consensus 179 ~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k--~~r~~~~~~~~~v~~~~~~~~~~~~~ 256 (342)
T 3qj4_A 179 ECQRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKK--RNIESSEIGPSLVIHTTVPFGVTYLE 256 (342)
T ss_dssp HHHHHHHHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHH--TTCCCC-CCCEEEEEECHHHHHHTTT
T ss_pred HHHHHHHhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccC--CCCCCCCCCceEEEECCHHHHHHhhc
Confidence 3456788999999999999999987552 34455554444 3333222221 2211 222333333332 2244667
Q ss_pred CCHHHHHHHHHHHHHHhCCCCccccccCceEEEEEEEEeCCceeccCCCCCCCCCCCC--CCCCCeEEecccccCCCCCc
Q 016397 276 CSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQR--SPVEGFYLAGDYTKQKYLAS 353 (390)
Q Consensus 276 ~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~~~~--~~~~~l~~aGd~~~~~~~~~ 353 (390)
++++++.+.++++|.+++|... +++++.++||+++.+++... .++... ...+||++||||+.+ ++
T Consensus 257 ~~~~~~~~~~~~~l~~~~g~~~-------~p~~~~v~rW~~a~p~~~~~---~~~~~~~~~~~~~l~laGd~~~g---~~ 323 (342)
T 3qj4_A 257 HSIEDVQELVFQQLENILPGLP-------QPIATKCQKWRHSQVTNAAA---NCPGQMTLHHKPFLACGGDGFTQ---SN 323 (342)
T ss_dssp SCHHHHHHHHHHHHHHHSCSCC-------CCSEEEEEEETTCSBSSCCS---SSCSCEEEETTTEEEECSGGGSC---SS
T ss_pred CCHHHHHHHHHHHHHHhccCCC-------CCceeeeccccccccccccC---CCcceeEecCCccEEEEccccCC---CC
Confidence 8999999999999999998543 46778899999998875431 122222 346899999999987 79
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 016397 354 MEGAVLSGKLCAQAIVQD 371 (390)
Q Consensus 354 ~~gA~~SG~~aA~~il~~ 371 (390)
+|+|+.||++||++|+++
T Consensus 324 v~~ai~sg~~aa~~i~~~ 341 (342)
T 3qj4_A 324 FDGCITSALCVLEALKNY 341 (342)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHHHHHhh
Confidence 999999999999999764
No 16
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.88 E-value=2.4e-21 Score=186.61 Aligned_cols=276 Identities=14% Similarity=0.149 Sum_probs=186.7
Q ss_pred ccccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHHhcc----cCCceEEeecCCCCccchHH
Q 016397 62 EAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE----KHGSKMAFLDGNPPERLCLP 137 (390)
Q Consensus 62 ~~~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~----~~~~~~~~~~GG~~~~l~~~ 137 (390)
..+| +|+.+|+.+.+.++ ..+.++.+++...++.+++++|+..++..+...-.. ...... .+.+|+ +.+++.
T Consensus 137 ~~~d-~s~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~-~~l~~~ 212 (431)
T 3k7m_X 137 EDLD-IPLNEYVDKLDLPP-VSRQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDE-VFSNGS-ADLVDA 212 (431)
T ss_dssp GGGC-SBHHHHHHHHTCCH-HHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCE-EETTCT-HHHHHH
T ss_pred hhhc-CCHHHHHHhcCCCH-HHHHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhh-hcCCcH-HHHHHH
Confidence 3456 99999999985544 456688888888888899999999887655432000 001122 678887 677777
Q ss_pred HHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhHhhhcCcchhccHHHHHhhcCCCccEE
Q 016397 138 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVI 217 (390)
Q Consensus 138 l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~~l~~~~~~ 217 (390)
+++ +.| +|++|++|++|..++++ + .|++.+|++++||+||+|+|++.++.+.-....+....+++..+.+....
T Consensus 213 ~~~---~~g-~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~ 286 (431)
T 3k7m_X 213 MSQ---EIP-EIRLQTVVTGIDQSGDV-V-NVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGL 286 (431)
T ss_dssp HHT---TCS-CEESSCCEEEEECSSSS-E-EEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEE
T ss_pred HHh---hCC-ceEeCCEEEEEEEcCCe-E-EEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceE
Confidence 764 346 99999999999986444 6 38888888899999999999999988741111243455667777888889
Q ss_pred EEEEEeCccccccCCceeecCCCcchhhhhcccccccccC-CCCcEEE-EEecCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 016397 218 NIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYN-PNQSMLE-LVFAPAEEWISCSDSEIIDATMKELAKLFPD 295 (390)
Q Consensus 218 ~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~a~-~g~~ll~-~~~~~~~~~~~~~~ee~~~~~~~~l~~~~p~ 295 (390)
+|.+.|+++++. +....++....+.+.. .. .+..++. +..... +...+.+ .+.+.|++++|.
T Consensus 287 kv~~~~~~~~~~----i~~~~d~~~~~~~~~~------~~~~~~~~l~~~~~g~~--~~~~~~~----~~~~~l~~~~~~ 350 (431)
T 3k7m_X 287 KILIHVRGAEAG----IECVGDGIFPTLYDYC------EVSESERLLVAFTDSGS--FDPTDIG----AVKDAVLYYLPE 350 (431)
T ss_dssp EEEEEEESCCTT----EEEEBSSSSSEEEEEE------ECSSSEEEEEEEEETTT--CCTTCHH----HHHHHHHHHCTT
T ss_pred EEEEEECCCCcC----ceEcCCCCEEEEEeCc------CCCCCCeEEEEEecccc--CCCCCHH----HHHHHHHHhcCC
Confidence 999999988642 1112222121111111 11 2333433 332222 3333332 466778888886
Q ss_pred CccccccCceEEEEEEEEeCC-----ceec-cCCCCC-CCCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHH
Q 016397 296 EISADQSKAKIVKYHVVKTPR-----SVYK-TIPNCE-PCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 368 (390)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~-----a~~~-~~~g~~-~~~~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~i 368 (390)
. .++.+...+|.. +.|. ..||+. ...+.+.+|.++|||||++++..|+++|+||+.||++||++|
T Consensus 351 ~--------~~~~~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i 422 (431)
T 3k7m_X 351 V--------EVLGIDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAI 422 (431)
T ss_dssp C--------EEEEEECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHH
T ss_pred C--------CccEeEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHH
Confidence 3 256666677743 4454 356653 456677788899999999999888899999999999999999
Q ss_pred HHH
Q 016397 369 VQD 371 (390)
Q Consensus 369 l~~ 371 (390)
+..
T Consensus 423 ~~~ 425 (431)
T 3k7m_X 423 LHS 425 (431)
T ss_dssp HHC
T ss_pred Hhh
Confidence 864
No 17
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.88 E-value=9.3e-22 Score=193.12 Aligned_cols=291 Identities=14% Similarity=0.078 Sum_probs=185.5
Q ss_pred ccccCccHHHHHHHcC-CChHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHHhcccCCceEEeecCCCCccchHHHHH
Q 016397 62 EAQDGLTVQEWMRKQG-VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVE 140 (390)
Q Consensus 62 ~~~d~~s~~e~l~~~g-~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~~~~~~~~~~~GG~~~~l~~~l~~ 140 (390)
..++++|+.+|+++.+ ++.+.++.+ .-++.... ....+....+.....+ ..+..+.++.||+ +.|+++|++
T Consensus 178 ~~~~~~s~~~~l~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~~gG~-~~l~~~l~~ 249 (498)
T 2iid_A 178 NKYDTYSTKEYLIKEGDLSPGAVDMI-GDLLNEDS---GYYVSFIESLKHDDIF---AYEKRFDEIVDGM-DKLPTAMYR 249 (498)
T ss_dssp HHHTTSBHHHHHHHTSCCCHHHHHHH-HHHTTCGG---GTTSBHHHHHHHHHHH---TTCCCEEEETTCT-THHHHHHHH
T ss_pred HHhhhhhHHHHHHHccCCCHHHHHHH-HHhcCccc---chhHHHHHHHHHHhcc---ccCcceEEeCCcH-HHHHHHHHH
Confidence 3468899999999975 566665533 22221100 0112222221111112 1123566889997 899999998
Q ss_pred HHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCe----EEEcCEEEEecChhhHhhhcCcchhccHHHHHhhcCCCccE
Q 016397 141 HIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN----VIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPV 216 (390)
Q Consensus 141 ~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~----~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~~l~~~~~ 216 (390)
.+. .+|++|++|++|..++++ + .|++.+|+ +++||+||+|+|+..+..+.-....|....++++++.|.++
T Consensus 250 ~l~---~~i~~~~~V~~I~~~~~~-v-~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp~~~~~ai~~l~~~~~ 324 (498)
T 2iid_A 250 DIQ---DKVHFNAQVIKIQQNDQK-V-TVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVHYRSG 324 (498)
T ss_dssp HTG---GGEESSCEEEEEEECSSC-E-EEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECE
T ss_pred hcc---cccccCCEEEEEEECCCe-E-EEEEecCCcccceEEeCEEEECCChHHHhheecCCCCCHHHHHHHHhCCCcce
Confidence 874 389999999999996444 6 47777664 58999999999999888773111135556778899999999
Q ss_pred EEEEEEeCccccccC---CceeecCCCcchhhhhcccccccccCCCCcEEEEE-ec-CCCCCCCCCHHHHHHHHHHHHHH
Q 016397 217 INIHIWFDRKLKNTY---DHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELV-FA-PAEEWISCSDSEIIDATMKELAK 291 (390)
Q Consensus 217 ~~v~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~s~~~~~~a~~g~~ll~~~-~~-~~~~~~~~~~ee~~~~~~~~l~~ 291 (390)
.+|++.|++++|... ++..+.+.+...++ ..+. ..|++..++... .. .+..|..++++++.+.++++|.+
T Consensus 325 ~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~s~----~~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L~~ 399 (498)
T 2iid_A 325 TKIFLTCTTKFWEDDGIHGGKSTTDLPSRFIY-YPNH----NFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSL 399 (498)
T ss_dssp EEEEEEESSCGGGGGTCCSSEEEESSTTCEEE-CCSS----CCTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCccCCCccCCcccCCCCcceEE-ECCC----CCCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHHHHH
Confidence 999999999998531 12223333322221 1111 134445555443 33 23457788999999999999999
Q ss_pred hCCCCccccccCceEEEEEEEEeCC-----ceec-cCCCCC-CCCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHH
Q 016397 292 LFPDEISADQSKAKIVKYHVVKTPR-----SVYK-TIPNCE-PCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLC 364 (390)
Q Consensus 292 ~~p~~~~~~~~~~~~~~~~~~~~~~-----a~~~-~~~g~~-~~~~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~a 364 (390)
+++.... .. ........+.+|.. +.|. ..|+.. ...+.+.++.+||||||++++..+ ++|+||+.||++|
T Consensus 400 ~~g~~~~-~~-~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~~-g~~~GAi~SG~ra 476 (498)
T 2iid_A 400 IHQLPKK-DI-QSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAH-GWIDSTIKSGLRA 476 (498)
T ss_dssp HHTCCHH-HH-HHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSSS-SCHHHHHHHHHHH
T ss_pred HcCCChh-hh-hhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccCC-cCHHHHHHHHHHH
Confidence 9973210 00 01122355677854 2232 223321 122334557889999999997655 7999999999999
Q ss_pred HHHHHHHhh
Q 016397 365 AQAIVQDYV 373 (390)
Q Consensus 365 A~~il~~~~ 373 (390)
|++|++.++
T Consensus 477 A~~i~~~l~ 485 (498)
T 2iid_A 477 ARDVNLASE 485 (498)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999998874
No 18
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.87 E-value=1.1e-21 Score=192.17 Aligned_cols=236 Identities=14% Similarity=0.116 Sum_probs=163.6
Q ss_pred ceEEeecCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCC---eEEEcCEEEEecChhhHhhhcCc
Q 016397 121 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYVFATPVDILKLQLPE 197 (390)
Q Consensus 121 ~~~~~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g---~~~~ad~VI~a~p~~~~~~ll~~ 197 (390)
..+.+++||+ +.|+++|++.|.+ ++|++|++|++|..+++ .++ |++.+| ++++||+||+|+|+..+..|..+
T Consensus 229 ~~~~~~~gG~-~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~-~v~-v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~~ 303 (489)
T 2jae_A 229 MMMFTPVGGM-DRIYYAFQDRIGT--DNIVFGAEVTSMKNVSE-GVT-VEYTAGGSKKSITADYAICTIPPHLVGRLQNN 303 (489)
T ss_dssp SSEEEETTCT-THHHHHHHHHHCG--GGEETTCEEEEEEEETT-EEE-EEEEETTEEEEEEESEEEECSCHHHHTTSEEC
T ss_pred ccEEeecCCH-HHHHHHHHHhcCC--CeEEECCEEEEEEEcCC-eEE-EEEecCCeEEEEECCEEEECCCHHHHHhCccC
Confidence 3567889997 8999999988732 78999999999998644 463 777776 67999999999999999888652
Q ss_pred chhccHHHHHhhcCCCccEEEEEEEeCccccccC----CceeecCCCcchhhhhcccccccccCCCCcEEEEEe-c-CCC
Q 016397 198 NWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTY----DHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVF-A-PAE 271 (390)
Q Consensus 198 ~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~s~~~~~~a~~g~~ll~~~~-~-~~~ 271 (390)
.+....+++++++|.++.+|++.|++++|... +.....+.++..++ ..+...+ .+ ...++.++. . ...
T Consensus 304 --l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~-~~s~~~~--~~-~~~l~~~~~~g~~~~ 377 (489)
T 2jae_A 304 --LPGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQIM-FPYDHYN--SD-RGVVVAYYSSGKRQE 377 (489)
T ss_dssp --CCHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCEEE-CCSSSTT--SS-CEEEEEEEEETHHHH
T ss_pred --CCHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceEEE-eCCCCCC--CC-CCEEEEEeeCCchhh
Confidence 24456677888999999999999999987421 12223334433332 1121111 12 234444332 2 234
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCC-CccccccCceEEEEEEEEeCCceec------cC------CCCC-CCCCCCCCCCC
Q 016397 272 EWISCSDSEIIDATMKELAKLFPD-EISADQSKAKIVKYHVVKTPRSVYK------TI------PNCE-PCRPLQRSPVE 337 (390)
Q Consensus 272 ~~~~~~~ee~~~~~~~~l~~~~p~-~~~~~~~~~~~~~~~~~~~~~a~~~------~~------~g~~-~~~~~~~~~~~ 337 (390)
.|..++++++++.++++|++++|. .. .++......+|.+..|. +. ||.. ..++.+++|.+
T Consensus 378 ~~~~~~~~~~~~~~l~~L~~~~~~~~~------~~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 451 (489)
T 2jae_A 378 AFESLTHRQRLAKAIAEGSEIHGEKYT------RDISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVD 451 (489)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHCGGGG------SSEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBT
T ss_pred hhhcCCHHHHHHHHHHHHHHHcCcchh------hhccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCC
Confidence 566789999999999999999986 32 23556667778653221 11 3422 12233456789
Q ss_pred CeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 016397 338 GFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 374 (390)
Q Consensus 338 ~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~~ 374 (390)
||||||++++. ++++++||+.||++||++|++.+..
T Consensus 452 ~l~faG~~~~~-~~~~v~gAi~sg~~aA~~i~~~l~~ 487 (489)
T 2jae_A 452 KIYFAGDHLSN-AIAWQHGALTSARDVVTHIHERVAQ 487 (489)
T ss_dssp TEEECSGGGBS-STTSHHHHHHHHHHHHHHHHHHHHC
T ss_pred cEEEeEHHhcc-CccHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999974 4479999999999999999987654
No 19
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.86 E-value=6.7e-21 Score=192.60 Aligned_cols=227 Identities=19% Similarity=0.254 Sum_probs=157.9
Q ss_pred EEeecCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcC------CeEEEcCEEEEecChhhHhhh--
Q 016397 123 MAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------GNVIDGDAYVFATPVDILKLQ-- 194 (390)
Q Consensus 123 ~~~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~------g~~~~ad~VI~a~p~~~~~~l-- 194 (390)
...+.||+ ++|+++|++ +.+|++|++|++|..++++ + .|++.+ |++++||+||+|+|+.+++++
T Consensus 393 ~~~~~gG~-~~l~~~La~-----~l~I~l~~~V~~I~~~~~~-v-~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~ 464 (662)
T 2z3y_A 393 HLTVRNGY-SCVPVALAE-----GLDIKLNTAVRQVRYTASG-C-EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPP 464 (662)
T ss_dssp CEEETTCT-THHHHHHTT-----TCEEETTEEEEEEEEETTE-E-EEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSC
T ss_pred eeeecCcH-HHHHHHHHh-----cCceecCCeEEEEEECCCc-E-EEEEeecccCCCCeEEEeCEEEECCCHHHHhcccC
Confidence 45678998 899998875 4589999999999997555 5 377655 568999999999999999874
Q ss_pred ----cCcchhccHHHHHhhcCCCccEEEEEEEeCcccccc-CCceee--c-CC--CcchhhhhcccccccccCCCCcEEE
Q 016397 195 ----LPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT-YDHLLF--S-RS--SLLSVYADMSLTCKEYYNPNQSMLE 264 (390)
Q Consensus 195 ----l~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~-~~~~~~--~-~~--~~~~~~~~~s~~~~~~a~~g~~ll~ 264 (390)
.|+ .|....++++++.|.++.+|++.|++++|.. ...+.+ . .. +...++.+ . .+..++.
T Consensus 465 ~i~f~P~--LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~------~---~~~~vL~ 533 (662)
T 2z3y_A 465 AVQFVPP--LPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWN------L---YKAPILL 533 (662)
T ss_dssp SSEEESC--CCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSSTTTTEEEEEEC------C---SSSSEEE
T ss_pred ceEEcCC--CCHHHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCCCCCceeEEEe------C---CCCCEEE
Confidence 232 2444567789999999999999999999953 121111 1 00 11111100 0 1223443
Q ss_pred -EEec-CCCCCCCCCHHHHHHHHHHHHHHhCCCCccccccCceEEEEEEEEeCC-----ceec-cCCCCCCC--------
Q 016397 265 -LVFA-PAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPR-----SVYK-TIPNCEPC-------- 328 (390)
Q Consensus 265 -~~~~-~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~-----a~~~-~~~g~~~~-------- 328 (390)
++.+ .+..+..++++++++.++++|.++||... ..++..+.+.+|.. |.|. ..||....
T Consensus 534 ~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~-----~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p 608 (662)
T 2z3y_A 534 ALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSA-----VPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQP 608 (662)
T ss_dssp EEECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTS-----SCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCC
T ss_pred EEeccHhHHHHHhCCHHHHHHHHHHHHHHHhCCcc-----cCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCc
Confidence 3333 23456788999999999999999998642 12466777888865 3444 34554210
Q ss_pred ------CCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 016397 329 ------RPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 373 (390)
Q Consensus 329 ------~~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~ 373 (390)
++...++.++|||||++|+..|+++|+||+.||++||++|+..++
T Consensus 609 ~~~~~~~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 609 ITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp BCC---------CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHT
T ss_pred CccccccccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHcc
Confidence 112244568999999999988889999999999999999998764
No 20
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.85 E-value=1e-20 Score=194.04 Aligned_cols=229 Identities=20% Similarity=0.255 Sum_probs=160.2
Q ss_pred EEeecCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcC------CeEEEcCEEEEecChhhHhhhc-
Q 016397 123 MAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------GNVIDGDAYVFATPVDILKLQL- 195 (390)
Q Consensus 123 ~~~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~------g~~~~ad~VI~a~p~~~~~~ll- 195 (390)
+..+.||+ +.|+++|++ +.+|++|++|++|..++++ + .|++.+ |++++||+||+|+|+.++++++
T Consensus 564 ~~~~~gG~-~~L~~aLa~-----~l~I~Lnt~V~~I~~~~~g-V-~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~ 635 (852)
T 2xag_A 564 HLTVRNGY-SCVPVALAE-----GLDIKLNTAVRQVRYTASG-C-EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPP 635 (852)
T ss_dssp CEEETTCT-THHHHHHTT-----TCCEECSEEEEEEEEETTE-E-EEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSC
T ss_pred eEEecCcH-HHHHHHHHh-----CCCEEeCCeEEEEEEcCCc-E-EEEEeecccCCCCeEEECCEEEECCCHHHHHhhhc
Confidence 45678998 899998875 3479999999999997554 5 377655 5689999999999999998842
Q ss_pred -----CcchhccHHHHHhhcCCCccEEEEEEEeCcccccc-CCceee--c-CC--CcchhhhhcccccccccCCCCcEEE
Q 016397 196 -----PENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT-YDHLLF--S-RS--SLLSVYADMSLTCKEYYNPNQSMLE 264 (390)
Q Consensus 196 -----~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~-~~~~~~--~-~~--~~~~~~~~~s~~~~~~a~~g~~ll~ 264 (390)
|+ .|....++++++.|.++.+|+|.|++++|.. ...+.+ . .. +...++.+ .+ ....|+.
T Consensus 636 ~I~F~P~--LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~~------~~--~~pvLl~ 705 (852)
T 2xag_A 636 AVQFVPP--LPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWN------LY--KAPILLA 705 (852)
T ss_dssp SSEEESC--CCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSSTTTTTTCEEEE------CS--SSSEEEE
T ss_pred ccccCCC--CCHHHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccCCCCceEEEec------CC--CCCEEEE
Confidence 22 2444566788999999999999999999953 122211 1 11 11111111 01 1123343
Q ss_pred EEec-CCCCCCCCCHHHHHHHHHHHHHHhCCCCccccccCceEEEEEEEEeCC-----ceec-cCCCCCC-----C----
Q 016397 265 LVFA-PAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPR-----SVYK-TIPNCEP-----C---- 328 (390)
Q Consensus 265 ~~~~-~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~-----a~~~-~~~g~~~-----~---- 328 (390)
++.+ .+..+..++++++++.++++|.++||... ..++..+.+.+|.+ |.|. ..||+.. .
T Consensus 706 ~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~-----~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~ 780 (852)
T 2xag_A 706 LVAGEAAGIMENISDDVIVGRCLAILKGIFGSSA-----VPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPI 780 (852)
T ss_dssp EECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTT-----CCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCB
T ss_pred EecCcCHHHHhcCCHHHHHHHHHHHHHHHhCccc-----cCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCcc
Confidence 3333 23456678999999999999999998642 12466777888865 3454 3455421 1
Q ss_pred -----CCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 016397 329 -----RPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 374 (390)
Q Consensus 329 -----~~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~~ 374 (390)
++...++.++|||||++++..|+++|+||+.||++||++|+..+..
T Consensus 781 ~~~~~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~~ 831 (852)
T 2xag_A 781 TPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLG 831 (852)
T ss_dssp CCCCSSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccccccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhhC
Confidence 1122455689999999999888899999999999999999998753
No 21
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.85 E-value=9.6e-21 Score=186.63 Aligned_cols=295 Identities=14% Similarity=0.147 Sum_probs=177.1
Q ss_pred ccCccHHHHHHHc------CCChHHHHHHHHHHHH---hccCCCcccccHHHHHHHHHHHhcccCCceEEeecCCCCccc
Q 016397 64 QDGLTVQEWMRKQ------GVPDRVTTEVFIAMSK---ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERL 134 (390)
Q Consensus 64 ~d~~s~~e~l~~~------g~~~~~~~~~~~p~~~---~~~~~~~~~~Sa~~~~~~l~~~~~~~~~~~~~~~~GG~~~~l 134 (390)
.+++|+.+|+.++ .+++.. ..++.+++. ..++.+++++|+.+++. ...+ ...+++| + +.|
T Consensus 136 ~~d~s~~~~l~~~l~~~~~~l~~~~-~~~~~~~~~~~~~~~g~~~~~~s~~~~~~-------~~~~-~~~~~~g-~-~~l 204 (516)
T 1rsg_A 136 VSDCSFFQLVMKYLLQRRQFLTNDQ-IRYLPQLCRYLELWHGLDWKLLSAKDTYF-------GHQG-RNAFALN-Y-DSV 204 (516)
T ss_dssp --CCBHHHHHHHHHHHHGGGSCHHH-HHHHHHHHGGGHHHHTBCTTTSBHHHHCC-------CCSS-CCEEESC-H-HHH
T ss_pred CCCCCHHHHHHHHHHHhhcccCHHH-HHHHHHHHHHHHHHhCCChHHCChHHHHh-------hccC-cchhhhC-H-HHH
Confidence 5679999998764 122222 223444443 23456778888775421 1112 2346777 7 889
Q ss_pred hHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhHhhh-------------cCcchhc
Q 016397 135 CLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ-------------LPENWKE 201 (390)
Q Consensus 135 ~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~~~l-------------l~~~~~~ 201 (390)
+++|++.|. +++|++|++|++|..++++.+ .|++.+|++++||+||+|+|+..++.. .|+ .|
T Consensus 205 ~~~l~~~l~--~~~i~~~~~V~~I~~~~~~~v-~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~--Lp 279 (516)
T 1rsg_A 205 VQRIAQSFP--QNWLKLSCEVKSITREPSKNV-TVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPP--LK 279 (516)
T ss_dssp HHHHHTTSC--GGGEETTCCEEEEEECTTSCE-EEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESC--CC
T ss_pred HHHHHHhCC--CCEEEECCEEEEEEEcCCCeE-EEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCC--CC
Confidence 999987764 368999999999998533445 588888988999999999999998642 233 34
Q ss_pred cHHHHHhhcCCCccEEEEEEEeCccccccC-CceeecCC---Ccchhhhhcc----------------------cccc--
Q 016397 202 MAYFKRLEKLVGVPVINIHIWFDRKLKNTY-DHLLFSRS---SLLSVYADMS----------------------LTCK-- 253 (390)
Q Consensus 202 ~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~-~~~~~~~~---~~~~~~~~~s----------------------~~~~-- 253 (390)
....++++++.|.++.+|++.|++++|... ..+..... ++...+...+ ...+
T Consensus 280 ~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (516)
T 1rsg_A 280 PVIQDAFDKIHFGALGKVIFEFEECCWSNESSKIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLF 359 (516)
T ss_dssp HHHHHHTTSSCCCCCEEEEEEESSCCSCCSCSEEEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSCEE
T ss_pred HHHHHHHHhCCCCcceEEEEEeCCCCCCCCCCcEEEeCCCCccchhhcccCcccchhhhcccccccccccccccccCcee
Confidence 566788899999999999999999999532 22222111 1111110000 0001
Q ss_pred --c-ccCCCCc-EEEEEecC-CCCCCCC--CHHHHHHH---HHHHHHHhCCC------Cccccc----cCceEEEEEEEE
Q 016397 254 --E-YYNPNQS-MLELVFAP-AEEWISC--SDSEIIDA---TMKELAKLFPD------EISADQ----SKAKIVKYHVVK 313 (390)
Q Consensus 254 --~-~a~~g~~-ll~~~~~~-~~~~~~~--~~ee~~~~---~~~~l~~~~p~------~~~~~~----~~~~~~~~~~~~ 313 (390)
. +.+.+.. ++.++.++ +..+..+ +++++.+. +++++.++++. ...+.. ....+..+.+.+
T Consensus 360 ~~~~~~~~~~~~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~ 439 (516)
T 1rsg_A 360 FVNLSKSTGVASFMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSN 439 (516)
T ss_dssp EEEHHHHTSCSEEEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECC
T ss_pred EEEeeecCCCcEEEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEec
Confidence 0 0122333 44443332 2234445 78887654 66666666652 110000 001122566677
Q ss_pred eCC-----ceec-cCCCCCCC--CCCCC-CCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 016397 314 TPR-----SVYK-TIPNCEPC--RPLQR-SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 374 (390)
Q Consensus 314 ~~~-----a~~~-~~~g~~~~--~~~~~-~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~~ 374 (390)
|.. |.|. ..||.... ...+. .+.++|||||++|+..|+++|+||+.||++||++|++.+..
T Consensus 440 W~~dp~~~Gsys~~~~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~~ 509 (516)
T 1rsg_A 440 WTRDPYSRGAYSACFPGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKL 509 (516)
T ss_dssp TTTCTTTTTCCCCCBC----CHHHHHHHHCSSSSEEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHHG
T ss_pred CCCCCCCCccCCCcCCCCCHHHHHHHhccCCCCcEEEeccccccCCCccchhHHHHHHHHHHHHHHHhhh
Confidence 743 5555 34565221 11122 35679999999999888899999999999999999987653
No 22
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.82 E-value=5.1e-20 Score=187.70 Aligned_cols=227 Identities=19% Similarity=0.281 Sum_probs=157.5
Q ss_pred eEEeecCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhHhhh----cCc
Q 016397 122 KMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ----LPE 197 (390)
Q Consensus 122 ~~~~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~~~l----l~~ 197 (390)
...++.+|+ +.++++|++ |.+|+++++|++|..++++ + .|++.+|++++||+||+|+|+..+++. .|+
T Consensus 525 ~~~~~~~G~-~~l~~aLa~-----gl~I~l~t~V~~I~~~~~~-v-~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~ 596 (776)
T 4gut_A 525 DHTLLTPGY-SVIIEKLAE-----GLDIQLKSPVQCIDYSGDE-V-QVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPP 596 (776)
T ss_dssp CEEECTTCT-HHHHHHHHT-----TSCEESSCCEEEEECSSSS-E-EEEETTCCEEEESEEEECCCHHHHHTTCSEEESC
T ss_pred CeEEECChH-HHHHHHHHh-----CCcEEcCCeeEEEEEcCCE-E-EEEECCCcEEEcCEEEECCCHHHHhhcccccCCC
Confidence 455678887 777777763 6799999999999986554 6 388888988999999999999999762 222
Q ss_pred chhccHHHHHhhcCCCccEEEEEEEeCcccccc--CCceeecC-------CCcchhhhhcccccccccCCC-CcEEE-EE
Q 016397 198 NWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT--YDHLLFSR-------SSLLSVYADMSLTCKEYYNPN-QSMLE-LV 266 (390)
Q Consensus 198 ~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~--~~~~~~~~-------~~~~~~~~~~s~~~~~~a~~g-~~ll~-~~ 266 (390)
.|....+++.++.+.++.+|++.|++++|.. .+...++. ..+..++.+ ..+.+ ..+|. ++
T Consensus 597 --Lp~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d-------~~p~g~~~vL~~~i 667 (776)
T 4gut_A 597 --LSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYD-------MDPQKKHSVLMSVI 667 (776)
T ss_dssp --CCHHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEE-------SCTTSCSCEEEEEE
T ss_pred --CCHHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCCcCCCceEEEEec-------CCCCCCceEEEEEe
Confidence 2445667888888999999999999999952 11111111 111122111 12333 23444 43
Q ss_pred ec-CCCCCCCCCHHHHHHHHHHHHHHhCCCCccccccCceEEEEEEEEeCC-----ceecc-CCCCCC-CCCCCCCCC-C
Q 016397 267 FA-PAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPR-----SVYKT-IPNCEP-CRPLQRSPV-E 337 (390)
Q Consensus 267 ~~-~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~-----a~~~~-~~g~~~-~~~~~~~~~-~ 337 (390)
.+ .+..+..++++|+++.++++|.++||... ...+..+.+.+|.. +.|.+ .+|... ..+.+..|+ +
T Consensus 668 ~G~~a~~l~~lsdeel~~~~l~~L~~ifg~~~-----~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~g 742 (776)
T 4gut_A 668 AGEAVASVRTLDDKQVLQQCMATLRELFKEQE-----VPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQG 742 (776)
T ss_dssp CTHHHHHHHTSCHHHHHHHHHHHHHHHTTTSC-----CCCCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTT
T ss_pred cchhHHHHHcCCHHHHHHHHHHHHHHHhCccc-----ccCcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCC
Confidence 33 23456678999999999999999998632 12456677788854 34442 344321 122233444 7
Q ss_pred CeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 338 GFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 338 ~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
+|||||++++..|+++|+||+.||++||++|++
T Consensus 743 rL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 743 TVFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp TEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred cEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 899999999988889999999999999999974
No 23
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.78 E-value=4.4e-20 Score=184.57 Aligned_cols=304 Identities=13% Similarity=0.070 Sum_probs=180.7
Q ss_pred ccccCccH---HHHHHHc-CCChHHHHHHHHHHHHhccC-CCcccccHHHHHHHHHHHhcccCCceEEeecCCCCccchH
Q 016397 62 EAQDGLTV---QEWMRKQ-GVPDRVTTEVFIAMSKALNF-INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCL 136 (390)
Q Consensus 62 ~~~d~~s~---~e~l~~~-g~~~~~~~~~~~p~~~~~~~-~~~~~~Sa~~~~~~l~~~~~~~~~~~~~~~~GG~~~~l~~ 136 (390)
.++|++|+ .+|+++. .++ .. ..++.-+..+..+ .+....|+..++... +. ..+.+...+.||+ ++|++
T Consensus 279 ~~~d~~S~~~~~~~L~~~~~~s-~~-~~~~~~~~~~~gg~~~~~~~S~le~L~~~---~~-~~~~~~~~i~GG~-~~L~~ 351 (721)
T 3ayj_A 279 VAFEKGTLPPVDGVLDVDESIS-YY-VELFGRFGFGTGGFKPLYNISLVEMMRLI---LW-DYSNEYTLPVTEN-VEFIR 351 (721)
T ss_dssp HHHHHTSSCCGGGTSCHHHHHH-HH-HHHHHHHCSSSSCCGGGTTBBHHHHHHHH---HT-TTTCEECCSSSST-HHHHH
T ss_pred HhhcccchhHHHHHHHhccccH-HH-HHHHHHHhhccCCCCCccchhHHHHHHHH---hc-CCccceeEECCcH-HHHHH
Confidence 45677787 7777541 122 12 2233332222222 234578887766543 22 2234567889997 89999
Q ss_pred HHHHHHHHcCcEEEcCceee--EEEECCCC------CEEEE-EEcCCe--EEEcCEEEEecChhhHhh------hc----
Q 016397 137 PIVEHIQSLGGEVRLNSRVQ--KIELNDDG------TVKNF-LLTNGN--VIDGDAYVFATPVDILKL------QL---- 195 (390)
Q Consensus 137 ~l~~~l~~~G~~I~l~~~V~--~I~~~~~g------~v~~V-~~~~g~--~~~ad~VI~a~p~~~~~~------ll---- 195 (390)
+|++.+.. |++|+++++|+ +|.+++++ .| .| ...+|+ +++||+||+|+|+..+.. +-
T Consensus 352 aLa~~l~~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V-~V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~~ 429 (721)
T 3ayj_A 352 NLFLKAQN-VGAGKLVVQVRQERVANACHSGTASARAQ-LLSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAAS 429 (721)
T ss_dssp HHHHHHHH-HTTTSEEEEEECEEEEEEEECSSSSCCEE-EEEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEEE
T ss_pred HHHHhccc-CCceEeCCEEEeeeEEECCCCCccccceE-EEEEecCCceEEEEcCEEEECCCHHHHhhcccccccccccc
Confidence 99998742 67899999999 99986554 25 36 445676 789999999999998853 21
Q ss_pred -------------------Ccchhc-------cHHHHHhhcCCCccEEEEEEEe-----CccccccCC----ceeecCCC
Q 016397 196 -------------------PENWKE-------MAYFKRLEKLVGVPVINIHIWF-----DRKLKNTYD----HLLFSRSS 240 (390)
Q Consensus 196 -------------------~~~~~~-------~~~~~~~~~l~~~~~~~v~l~~-----~~~~~~~~~----~~~~~~~~ 240 (390)
++...+ ....++++++.|.+..||.+.| +++||.... ...+.+.+
T Consensus 430 ~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~~g~~i~~s~TD~~ 509 (721)
T 3ayj_A 430 QNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQWRGEPIKAVVSDSG 509 (721)
T ss_dssp EEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEETTEECCEEEETTT
T ss_pred ccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcccccCCCCceeeecCCC
Confidence 111113 4567889999999999999999 899986321 12334444
Q ss_pred cchhhhhcccccccccCCCCcEEE--EEec-CCCCC------CCCCHHH-------HHHHHHHHHH--HhCCCCcc--c-
Q 016397 241 LLSVYADMSLTCKEYYNPNQSMLE--LVFA-PAEEW------ISCSDSE-------IIDATMKELA--KLFPDEIS--A- 299 (390)
Q Consensus 241 ~~~~~~~~s~~~~~~a~~g~~ll~--~~~~-~~~~~------~~~~~ee-------~~~~~~~~l~--~~~p~~~~--~- 299 (390)
+..++.-.++...++.+++..++- ++.. .+..| ..+++++ +++.++++|. +++|+... |
T Consensus 510 ~r~~~~~p~p~~~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~la~~~~~p~~~~~~~~ 589 (721)
T 3ayj_A 510 LAASYVVPSPIVEDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRAYRYVKYAGASNAQPW 589 (721)
T ss_dssp TEEEEEEECSCC----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHTCCEECCTTCSSCEEC
T ss_pred cceEEEeccCcccccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHHhhhccCccccccccc
Confidence 332211011000022233334332 3333 22233 3333333 4899999999 88886430 0
Q ss_pred cc----cCceEEEEEEEEeCC----ceec-cCCCCC-------CCC--CCCCCCCCCeEEecccccCCCCCchhHHHHHH
Q 016397 300 DQ----SKAKIVKYHVVKTPR----SVYK-TIPNCE-------PCR--PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSG 361 (390)
Q Consensus 300 ~~----~~~~~~~~~~~~~~~----a~~~-~~~g~~-------~~~--~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG 361 (390)
.+ ....+.++..+.|.. |.|. +.||+. .+. .....+..+||||||+++. +++++|||+.||
T Consensus 590 ~~~~l~~~~~~~~~~~~dW~~dps~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe~~S~-~~GWieGAl~Sa 668 (721)
T 3ayj_A 590 WFYQLLAEARTADRFVFDWTTNKTAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASDSYSH-LGGWLEGAFMSA 668 (721)
T ss_dssp HHHHHHHTSCSTTCEEEEGGGSTTSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSGGGSS-CTTSHHHHHHHH
T ss_pred hhhhhhhhcccCceEEEeCCCCCCCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeehhhcc-CCceehHHHHHH
Confidence 00 000012234556632 3333 456651 111 1123456899999999984 568999999999
Q ss_pred HHHHHHHHHHhhhh
Q 016397 362 KLCAQAIVQDYVLL 375 (390)
Q Consensus 362 ~~aA~~il~~~~~~ 375 (390)
.+||..|+..++..
T Consensus 669 ~~Aa~~i~~~~~~~ 682 (721)
T 3ayj_A 669 LNAVAGLIVRANRG 682 (721)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999988643
No 24
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.73 E-value=2.4e-16 Score=146.37 Aligned_cols=221 Identities=15% Similarity=0.122 Sum_probs=151.4
Q ss_pred cCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEE-cCEEEEecChhhHhhhcCcchhccHHH
Q 016397 127 DGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVID-GDAYVFATPVDILKLQLPENWKEMAYF 205 (390)
Q Consensus 127 ~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~-ad~VI~a~p~~~~~~ll~~~~~~~~~~ 205 (390)
.+|+ +.+.+.|++ |.+|+++++|++|..++++ + .|++.+|+.+. +|.||+|+|+..+.++++.. + +..
T Consensus 106 ~~~~-~~l~~~l~~-----g~~i~~~~~v~~i~~~~~~-~-~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~--~-~l~ 174 (336)
T 1yvv_A 106 KPGM-SAITRAMRG-----DMPVSFSCRITEVFRGEEH-W-NLLDAEGQNHGPFSHVIIATPAPQASTLLAAA--P-KLA 174 (336)
T ss_dssp SSCT-HHHHHHHHT-----TCCEECSCCEEEEEECSSC-E-EEEETTSCEEEEESEEEECSCHHHHGGGGTTC--H-HHH
T ss_pred CccH-HHHHHHHHc-----cCcEEecCEEEEEEEeCCE-E-EEEeCCCcCccccCEEEEcCCHHHHHHhhccC--H-HHH
Confidence 4565 555555543 7899999999999987555 5 38888887664 99999999999988887542 2 345
Q ss_pred HHhhcCCCccEEEEEEEeCccccccCCceeecCCCcchhhhhcccccccccCCCCcEEEEEec--CCCCCCCCCHHHHHH
Q 016397 206 KRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFA--PAEEWISCSDSEIID 283 (390)
Q Consensus 206 ~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~a~~g~~ll~~~~~--~~~~~~~~~~ee~~~ 283 (390)
..+..+.|.++.++++.|+++++.....+.+.+.++..++ +.+ ..+...+.+ ..+.+... ....+.+++++++.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~-~~p~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~ 251 (336)
T 1yvv_A 175 SVVAGVKMDPTWAVALAFETPLQTPMQGCFVQDSPLDWLA-RNR-SKPERDDTL-DTWILHATSQWSRQNLDASREQVIE 251 (336)
T ss_dssp HHHTTCCEEEEEEEEEEESSCCSCCCCEEEECSSSEEEEE-EGG-GSTTCCCSS-EEEEEEECHHHHHHTTTSCHHHHHH
T ss_pred HHHhhcCccceeEEEEEecCCCCCCCCeEEeCCCceeEEE-ecC-cCCCCCCCC-cEEEEEeCHHHHHHHHhCCHHHHHH
Confidence 6678889999999999999987754444444444433332 111 112111111 12222222 234466789999999
Q ss_pred HHHHHHHHhCCCCccccccCceEEEEEEEEeCCceeccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHH
Q 016397 284 ATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKL 363 (390)
Q Consensus 284 ~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~ 363 (390)
.+++++.++++... ..+....+.+|.++.+.+..+.. ....+.++|++|||++.+ +++++|+.||.+
T Consensus 252 ~l~~~l~~~lg~~~------~~p~~~~~~rw~~a~~~~~~~~~----~~~~~~~rl~laGDa~~g---~gv~~a~~sg~~ 318 (336)
T 1yvv_A 252 HLHGAFAELIDCTM------PAPVFSLAHRWLYARPAGAHEWG----ALSDADLGIYVCGDWCLS---GRVEGAWLSGQE 318 (336)
T ss_dssp HHHHHHHTTCSSCC------CCCSEEEEEEEEEEEESSCCCCS----CEEETTTTEEECCGGGTT---SSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCC------CCCcEEEccccCccCCCCCCCCC----eeecCCCCEEEEecCCCC---CCHHHHHHHHHH
Confidence 99999999998532 12344567888877665544332 111235799999999986 699999999999
Q ss_pred HHHHHHHHhhh
Q 016397 364 CAQAIVQDYVL 374 (390)
Q Consensus 364 aA~~il~~~~~ 374 (390)
+|+.|.+.+.+
T Consensus 319 lA~~l~~~~~~ 329 (336)
T 1yvv_A 319 AARRLLEHLQL 329 (336)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHhhh
Confidence 99999988753
No 25
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.70 E-value=1.1e-16 Score=153.69 Aligned_cols=272 Identities=10% Similarity=0.094 Sum_probs=164.9
Q ss_pred ccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCCcccccHHHHHHHHHH--HhcccCCceEEeecCCCCccchHHHHHH
Q 016397 64 QDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR--FLQEKHGSKMAFLDGNPPERLCLPIVEH 141 (390)
Q Consensus 64 ~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~--~~~~~~~~~~~~~~GG~~~~l~~~l~~~ 141 (390)
.+.+|+.+|+++++++ ++.+.+.+|++...+ ++++++|+.+++..+.. .+....+. ...+.||+ +.++++|.+.
T Consensus 140 ~~~~s~~~~l~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~g~-~~l~~~l~~~ 215 (424)
T 2b9w_A 140 DLMLPFDEFLALNGCE-AARDLWINPFTAFGY-GHFDNVPAAYVLKYLDFVTMMSFAKGD-LWTWADGT-QAMFEHLNAT 215 (424)
T ss_dssp GGGSBHHHHHHHTTCG-GGHHHHTTTTCCCCC-CCTTTSBHHHHHHHSCHHHHHHHHHTC-CBCCTTCH-HHHHHHHHHH
T ss_pred hhccCHHHHHHhhCcH-HHHHHHHHHHHhhcc-CChHhcCHHHHHHhhhHhhhhcccCCc-eEEeCChH-HHHHHHHHHh
Confidence 4579999999998664 577877888887766 57889999887543321 11101122 33578897 8999999876
Q ss_pred HHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhHhhhcCcchhccHHHHHhhcCCCccEEEEEE
Q 016397 142 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHI 221 (390)
Q Consensus 142 l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~~l~~~~~~~v~l 221 (390)
+ +.+|++|++|++|..++ ++++ |++.+|+ ++||+||+|+|+..+.++++.. + +..+.+.++++.+.. +.+
T Consensus 216 l---~~~v~~~~~V~~i~~~~-~~v~-v~~~~g~-~~ad~Vv~a~~~~~~~~~l~~~--~-~~~~~~~~~~~~~~~-~~~ 285 (424)
T 2b9w_A 216 L---EHPAERNVDITRITRED-GKVH-IHTTDWD-RESDVLVLTVPLEKFLDYSDAD--D-DEREYFSKIIHQQYM-VDA 285 (424)
T ss_dssp S---SSCCBCSCCEEEEECCT-TCEE-EEESSCE-EEESEEEECSCHHHHTTSBCCC--H-HHHHHHTTCEEEEEE-EEE
T ss_pred h---cceEEcCCEEEEEEEEC-CEEE-EEECCCe-EEcCEEEECCCHHHHhhccCCC--H-HHHHHHhcCCcceeE-EEE
Confidence 6 56899999999999864 4464 8887775 8999999999999888877642 2 222345566665533 233
Q ss_pred EeCccccccCCceeecCC--C-cch-hhhhcccccccccCCC-CcEEE-EEecCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 016397 222 WFDRKLKNTYDHLLFSRS--S-LLS-VYADMSLTCKEYYNPN-QSMLE-LVFAPAEEWISCSDSEIIDATMKELAKLFPD 295 (390)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~--~-~~~-~~~~~s~~~~~~a~~g-~~ll~-~~~~~~~~~~~~~~ee~~~~~~~~l~~~~p~ 295 (390)
.+...++ .+..+ ++++ + ..+ .+.+.. ..+++ ..++. +...+...+...+++++.+.++++|.++.+.
T Consensus 286 ~~~~~~~-~~~~~-~~~~~~~~~~g~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l~~~ 358 (424)
T 2b9w_A 286 CLVKEYP-TISGY-VPDNMRPERLGHVMVYYH-----RWADDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETFGHP 358 (424)
T ss_dssp EEESSCC-SSEEE-CGGGGSGGGTTSCCEEEE-----CCTTCTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHHTTCC
T ss_pred EEeccCC-ccccc-ccCCCCCcCCCcceEEee-----ecCCCCceEEEEEeccCCCcccccChHHHHHHHHHHHHHcCCc
Confidence 3333332 11121 1211 1 111 110100 01222 23443 3333445566788999999999999995443
Q ss_pred CccccccCceEEEEEEEEeCC----ceeccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHH
Q 016397 296 EISADQSKAKIVKYHVVKTPR----SVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 369 (390)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~----a~~~~~~g~~~~~~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il 369 (390)
.. .++.. ..|.. +...+..|+.. +....++.+|+||||+|+.. +.+|+|+.||.+||++|+
T Consensus 359 ~~-------~~~~~--~~w~~~p~~~~~~~~~G~~~-~~~~~~~~~~l~~aG~~~~~---g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 359 VE-------KIIEE--QTWYYFPHVSSEDYKAGWYE-KVEGMQGRRNTFYAGEIMSF---GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp EE-------EEEEE--EEEEEEEECCHHHHHTTHHH-HHHHTTTGGGEEECSGGGSC---SSHHHHHHHHHHHHHHHT
T ss_pred cc-------ccccc--cceeeeeccCHHHHhccHHH-HHHHHhCCCCceEecccccc---ccHHHHHHHHHHHHHHhc
Confidence 21 12211 12211 11112223211 01112335799999999975 689999999999999875
No 26
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.57 E-value=4.3e-14 Score=135.77 Aligned_cols=164 Identities=14% Similarity=0.028 Sum_probs=118.0
Q ss_pred CCCChhhHHHHHcCCCCCCHHHHHHhhhhhHHHHhcccc---ccc--cccCccHHHHHHHcCCChHHHHHHHHHHHHhcc
Q 016397 21 LPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQA---YVE--AQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALN 95 (390)
Q Consensus 21 ~~~P~~~~~~ll~~~~~ls~~~k~r~~~~~~~~~~~~~~---~~~--~~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~ 95 (390)
.+.|.+. .+++++ +.|++.||.++.+.+.....-... .++ +++++|+.+|++++++++.+.+.++.++.-..
T Consensus 141 ~~VPss~-~e~~~~-~lLs~~eK~~l~kFL~~l~~~~~~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~- 217 (475)
T 3p1w_A 141 HKVPATD-MEALVS-PLLSLMEKNRCKNFYQYVSEWDANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYL- 217 (475)
T ss_dssp EECCCSH-HHHHTC-TTSCHHHHHHHHHHHHHHHHCCTTCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCS-
T ss_pred EeCCCCH-HHHhhc-cCCCHHHHHHHHHHHHHHHhhhhccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhc-
Confidence 3456664 478888 899999999998776554321111 122 24689999999999999888774433332111
Q ss_pred CCCcccccHHHHHHHHHHHhc---ccCCceEEeecCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc
Q 016397 96 FINPDELSMQCILIALNRFLQ---EKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT 172 (390)
Q Consensus 96 ~~~~~~~Sa~~~~~~l~~~~~---~~~~~~~~~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~ 172 (390)
..+..+.|+...+..+..++. ...+..+.||+||+ +.|+++|++.+++.|++|+++++|++|..+++|++++|++.
T Consensus 218 ~~~~~~~~a~~~l~ri~~y~~Sl~~yg~s~~~yp~gG~-~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~ 296 (475)
T 3p1w_A 218 NDDYLKQPAYLTLERIKLYMQSISAFGKSPFIYPLYGL-GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSS 296 (475)
T ss_dssp SSGGGGSBHHHHHHHHHHHHHHHHHHSSCSEEEETTCT-THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEET
T ss_pred CCCcccCCHHHHHHHHHHHHHHHhhcCCCceEEECCCH-HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEEC
Confidence 123445688777765554431 12235688999997 89999999999999999999999999998556778889999
Q ss_pred CCeEEEcCEEEEecCh
Q 016397 173 NGNVIDGDAYVFATPV 188 (390)
Q Consensus 173 ~g~~~~ad~VI~a~p~ 188 (390)
+|++++||+||++...
T Consensus 297 ~G~~i~Ad~VI~a~~~ 312 (475)
T 3p1w_A 297 DGEIAYCDKVICDPSY 312 (475)
T ss_dssp TSCEEEEEEEEECGGG
T ss_pred CCcEEECCEEEECCCc
Confidence 8988999999999864
No 27
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.51 E-value=2.1e-14 Score=135.00 Aligned_cols=142 Identities=13% Similarity=0.057 Sum_probs=103.7
Q ss_pred ccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHHh-cccC-CceE-EeecCCCCccchHHHHH
Q 016397 64 QDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL-QEKH-GSKM-AFLDGNPPERLCLPIVE 140 (390)
Q Consensus 64 ~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~~-~~~~-~~~~-~~~~GG~~~~l~~~l~~ 140 (390)
.+++|+.+|+.++ +++++++.++.|++.++|+.+++++|+.++......+. .+.. ...+ ++|+||+ +.|+++|++
T Consensus 126 ~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~~ 203 (367)
T 1i8t_A 126 KVPENLEEQAISL-VGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGY-TKLIEKMLE 203 (367)
T ss_dssp CCCCSHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCH-HHHHHHHHT
T ss_pred CCCccHHHHHHHH-HhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCH-HHHHHHHhc
Confidence 4689999999999 99999999999999999999999999876521000110 1111 1123 4899997 889888875
Q ss_pred HHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhHhhhcCcchhccHHHHHhhcCCCccEEEEE
Q 016397 141 HIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIH 220 (390)
Q Consensus 141 ~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~~l~~~~~~~v~ 220 (390)
|++|++|++|++|.. . + .+.+|+||+|+|++.+..+ .+.+++|.++..+.
T Consensus 204 -----g~~i~l~~~V~~i~~---~-v---------~~~~D~VV~a~p~~~~~~~------------~l~~l~y~s~~~v~ 253 (367)
T 1i8t_A 204 -----GVDVKLGIDFLKDKD---S-L---------ASKAHRIIYTGPIDQYFDY------------RFGALEYRSLKFET 253 (367)
T ss_dssp -----TSEEECSCCGGGSHH---H-H---------HTTEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEE
T ss_pred -----CCEEEeCCceeeech---h-h---------hccCCEEEEeccHHHHHHH------------hhCCCCCceEEEEE
Confidence 689999999998863 1 2 1468999999999876543 13467899999999
Q ss_pred EEeCccccccCCceeec
Q 016397 221 IWFDRKLKNTYDHLLFS 237 (390)
Q Consensus 221 l~~~~~~~~~~~~~~~~ 237 (390)
+.++++..++..++.+.
T Consensus 254 ~~~d~~~~~~~~~~~~~ 270 (367)
T 1i8t_A 254 ERHEFPNFQGNAVINFT 270 (367)
T ss_dssp EEESSSCSSSSSEEEEC
T ss_pred EEeccccCCCCeEEEeC
Confidence 99988644333344444
No 28
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.51 E-value=9e-16 Score=146.00 Aligned_cols=238 Identities=10% Similarity=-0.011 Sum_probs=144.9
Q ss_pred ccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHHh-cccC-CceE-EeecCCCCccchHHHHH
Q 016397 64 QDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL-QEKH-GSKM-AFLDGNPPERLCLPIVE 140 (390)
Q Consensus 64 ~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~~-~~~~-~~~~-~~~~GG~~~~l~~~l~~ 140 (390)
.+++|+.+|+.++ +++++++.++.|++.++|+.+++++|+.++......+. .+.. ...+ ++|+||+ ++|+++|++
T Consensus 136 ~~~~s~~e~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~~ 213 (399)
T 1v0j_A 136 ADAQNLEEKAISL-IGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGY-TAWLQNMAA 213 (399)
T ss_dssp TC----CCHHHHH-HCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHH-HHHHHHHTC
T ss_pred CCcccHHHHHHHH-HhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccH-HHHHHHHHh
Confidence 4678999999997 99999999999999999999999999976521100111 1111 1134 4899997 899999986
Q ss_pred HHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEE-EcCEEEEecChhhHhhhcCcchhccHHHHHhhcCCCccEEEE
Q 016397 141 HIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVI-DGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINI 219 (390)
Q Consensus 141 ~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~-~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~~l~~~~~~~v 219 (390)
+.|++|++|++|++|..+ + + ++ +||+||+|+|++.+.++. +.+++|.++..+
T Consensus 214 ---~~g~~I~l~~~V~~I~~~----v------~--~~~~aD~VI~t~p~~~l~~~~------------l~~l~y~s~~~~ 266 (399)
T 1v0j_A 214 ---DHRIEVRLNTDWFDVRGQ----L------R--PGSPAAPVVYTGPLDRYFDYA------------EGRLGWRTLDFE 266 (399)
T ss_dssp ---STTEEEECSCCHHHHHHH----H------T--TTSTTCCEEECSCHHHHTTTT------------TCCCCEEEEEEE
T ss_pred ---cCCeEEEECCchhhhhhh----h------h--hcccCCEEEECCcHHHHHhhh------------hCCCCcceEEEE
Confidence 358899999999999741 2 1 35 699999999999877651 345788888888
Q ss_pred EEEeCccccccCCceeecCC--Ccchhhhhccccccccc-CCCCcEEEEEecCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 016397 220 HIWFDRKLKNTYDHLLFSRS--SLLSVYADMSLTCKEYY-NPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDE 296 (390)
Q Consensus 220 ~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~~a-~~g~~ll~~~~~~~~~~~~~~~ee~~~~~~~~l~~~~p~~ 296 (390)
.+.++.+...+...+.+.+. +...+. .+++..+... ++++.+++..+.. .|. +..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~ri~-~~~~~~~~~~~~~~~~~v~~e~~~--~~~-------------------~~~ 324 (399)
T 1v0j_A 267 VEVLPIGDFQGTAVMNYNDLDVPYTRIH-EFRHFHPERDYPTDKTVIMREYSR--FAE-------------------DDD 324 (399)
T ss_dssp EEEESSSCSSSSSEEEECCTTSSCSEEE-EGGGGCTTSCCCSSCEEEEEEEEE--ECC-------------------TTS
T ss_pred EEEEccccCCCCeEEEeCCCCCCcceeE-eecCCCCCCcCCCCCeEEEEeecc--ccc-------------------CCC
Confidence 99998765433333444432 222221 1222223332 3344555544321 111 000
Q ss_pred ccccccCceEEEEEEEEeCCceeccCCCCCC---CCCCCCCCC---CCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 297 ISADQSKAKIVKYHVVKTPRSVYKTIPNCEP---CRPLQRSPV---EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~---~~~~~~~~~---~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
. +- .+.+.++... .......+. +||||||++....| .+|++|+.||.++|++|.+
T Consensus 325 ~--------~~----------ypv~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~-~~~e~~i~sa~~~a~~l~~ 385 (399)
T 1v0j_A 325 E--------PY----------YPINTEADRALLATYRARAKSETASSKVLFGGRLGTYQY-LDMHMAIASALNMYDNVLA 385 (399)
T ss_dssp C--------CC----------EECCCHHHHHHHHHHHHHHHHHHHHHCEEECHHHHHTCC-CCHHHHHHHHHHHHHHTHH
T ss_pred c--------cc----------cccCcHHHHHHHHHHHHHHHhccccCCEEEccceEEEEe-cCHHHHHHHHHHHHHHHhh
Confidence 0 00 0111111100 000011112 69999999877766 6899999999999999975
Q ss_pred H
Q 016397 371 D 371 (390)
Q Consensus 371 ~ 371 (390)
.
T Consensus 386 ~ 386 (399)
T 1v0j_A 386 P 386 (399)
T ss_dssp H
T ss_pred h
Confidence 3
No 29
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.48 E-value=2.2e-11 Score=117.68 Aligned_cols=285 Identities=11% Similarity=0.009 Sum_probs=157.3
Q ss_pred HHHcCCCCCCHHHHHHhhhhhHHHHhcccc---ccc--cccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCC-ccccc
Q 016397 30 AILRNNEMLTWPEKVKFAIGLLPAIIGGQA---YVE--AQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFIN-PDELS 103 (390)
Q Consensus 30 ~ll~~~~~ls~~~k~r~~~~~~~~~~~~~~---~~~--~~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~-~~~~S 103 (390)
+.++. .++++.+|.++.+.+......... .+. ..+.+|+.+|+++++.++.+.+ ++...+. +...+ ....+
T Consensus 135 ~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~-l~~~~~~~~~p 211 (453)
T 2bcg_G 135 EAISS-PLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKFGLGNSTKE-FIGHAMA-LWTNDDYLQQP 211 (453)
T ss_dssp HHHHC-TTSCHHHHHHHHHHHHHHHHCBTTBGGGSTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTS-CCSSSGGGGSB
T ss_pred HHHhh-hccchhhHHHHHHHHHHHHHhccCCchhhhccccccCCHHHHHHHhCCCHHHHH-HHHHHHH-hccCccccCCc
Confidence 45556 678888887665433322111110 011 2568999999999977666544 4432221 11110 11112
Q ss_pred HHHHHHHHHHHh---cccCCceEEeecCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECC-CCCEEEEEEcCCeEEEc
Q 016397 104 MQCILIALNRFL---QEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELND-DGTVKNFLLTNGNVIDG 179 (390)
Q Consensus 104 a~~~~~~l~~~~---~~~~~~~~~~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~-~g~v~~V~~~~g~~~~a 179 (390)
+...+..+..++ .......+.+|+||+ +.|+++|++.+++.|++|+++++|++|..+. ++++++|++ +|+++.|
T Consensus 212 ~~~~~~~~~~~~~s~~~~~~~~~~~p~gG~-~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~a 289 (453)
T 2bcg_G 212 ARPSFERILLYCQSVARYGKSPYLYPMYGL-GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKA 289 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCSEEEETTCT-THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEEC
T ss_pred hHHHHHHHHHHHHHHHhhcCCceEeeCCCH-HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEEC
Confidence 322221111111 011122466899997 8999999999999999999999999999852 566667776 5888999
Q ss_pred CEEEEecChhhHhhhcCcchhccHHHHHhhcCCCccEEEEEEEeCccccc---cCC-ceeecC-----CCcchhhhhccc
Q 016397 180 DAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKN---TYD-HLLFSR-----SSLLSVYADMSL 250 (390)
Q Consensus 180 d~VI~a~p~~~~~~ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~---~~~-~~~~~~-----~~~~~~~~~~s~ 250 (390)
|+||+|+++..- ++ .+... ......+.+++++.. ... .+++.. .+..-+. ..+.
T Consensus 290 d~VV~a~~~~~~-~l--------------~~~~~-~~~~~~~i~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~v~-~~s~ 352 (453)
T 2bcg_G 290 PLVIADPTYFPE-KC--------------KSTGQ-RVIRAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYVA-IVSD 352 (453)
T ss_dssp SCEEECGGGCGG-GE--------------EEEEE-EEEEEEEEESSCCTTSTTCSSEEEEECGGGTTCSSCEEEE-EEEG
T ss_pred CEEEECCCccch-hh--------------cccCC-cceeEEEEEccccCCCCCCccEEEEeCccccCCCCCEEEE-EeCC
Confidence 999999887521 11 11110 112222227776541 111 233432 1111111 1222
Q ss_pred ccccccCCCCcEEEEEe-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCccccccCceEEEEEEEEeCCceeccCCCCCCCC
Q 016397 251 TCKEYYNPNQSMLELVF-APAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR 329 (390)
Q Consensus 251 ~~~~~a~~g~~ll~~~~-~~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~ 329 (390)
.+ ..+|+|++++.+.. .+. .+.++-++ ..++++.|... ..+.. .. .|....
T Consensus 353 ~d-~~aP~G~~~~~v~~~~~~-----~~~~~~l~---~~~~~l~~~~~-------~~~~~--~~----~~~~~~------ 404 (453)
T 2bcg_G 353 AH-NVCSKGHYLAIISTIIET-----DKPHIELE---PAFKLLGPIEE-------KFMGI--AE----LFEPRE------ 404 (453)
T ss_dssp GG-TSSCTTCEEEEEEEECCS-----SCHHHHTH---HHHGGGCSCSE-------EEEEE--EE----EEEESS------
T ss_pred CC-CCCCCCcEEEEEEEecCC-----CCHHHHHH---HHHHHhhhHHH-------hhccc--hh----eeeecC------
Confidence 23 45888888776543 332 12222223 34444555422 22222 21 122110
Q ss_pred CCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 330 PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 330 ~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
...-+|||+||++... ..+|+++.+++.++++|+.
T Consensus 405 ---~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g 439 (453)
T 2bcg_G 405 ---DGSKDNIYLSRSYDAS---SHFESMTDDVKDIYFRVTG 439 (453)
T ss_dssp ---CSTTTSEEECCCCCSC---SBSHHHHHHHHHHHHHHHS
T ss_pred ---CCCCCCEEECCCCCcc---ccHHHHHHHHHHHHHHHHC
Confidence 1123799999998877 5789999999999999983
No 30
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.46 E-value=9.2e-14 Score=131.33 Aligned_cols=231 Identities=10% Similarity=0.045 Sum_probs=143.0
Q ss_pred ccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHH-hcccC-CceE-EeecCCCCccchHHHHH
Q 016397 64 QDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-LQEKH-GSKM-AFLDGNPPERLCLPIVE 140 (390)
Q Consensus 64 ~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~-~~~~~-~~~~-~~~~GG~~~~l~~~l~~ 140 (390)
.+++|+.+|+.++ +++++++.++.|++.++|+.+++++|+.++......+ ..+.. ...+ ++|+||+ +.|+++|++
T Consensus 130 ~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~~ 207 (384)
T 2bi7_A 130 ADPQTFEEEALRF-IGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGY-TQMIKSILN 207 (384)
T ss_dssp SSCCBHHHHHHHH-HCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHH-HHHHHHHHC
T ss_pred CCCcCHHHHHHHh-hcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCH-HHHHHHHHh
Confidence 5789999999998 9999999999999999999999999998642100001 01110 1233 4899997 899999986
Q ss_pred HHHHcCcEEEcCceee-EEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhHhhhcCcchhccHHHHHhhcCCCccEEEE
Q 016397 141 HIQSLGGEVRLNSRVQ-KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINI 219 (390)
Q Consensus 141 ~l~~~G~~I~l~~~V~-~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~~l~~~~~~~v 219 (390)
+.|++|++|++|+ +|.. .+|+||+|+|++.+.+++ +.+++|.++..+
T Consensus 208 ---~~g~~I~l~~~V~~~i~~-----------------~~d~VI~a~p~~~~~~~~------------lg~l~y~s~~~v 255 (384)
T 2bi7_A 208 ---HENIKVDLQREFIVEERT-----------------HYDHVFYSGPLDAFYGYQ------------YGRLGYRTLDFK 255 (384)
T ss_dssp ---STTEEEEESCCCCGGGGG-----------------GSSEEEECSCHHHHTTTT------------TCCCCEEEEEEE
T ss_pred ---cCCCEEEECCeeehhhhc-----------------cCCEEEEcCCHHHHHHhh------------cCCCCcceEEEE
Confidence 3588999999998 7742 289999999999887752 235688888888
Q ss_pred EEEeCccccccCCceeecCC--CcchhhhhcccccccccCCCCcEEEEEecCCCCCCCCCHHHHHHHHHHHHHHhCCCCc
Q 016397 220 HIWFDRKLKNTYDHLLFSRS--SLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEI 297 (390)
Q Consensus 220 ~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~~a~~g~~ll~~~~~~~~~~~~~~~ee~~~~~~~~l~~~~p~~~ 297 (390)
.+.++..+. +..++.+.+. +...+. .+++..+... +++++++..+.. .|. +..
T Consensus 256 ~~~~d~~~~-~~~~~n~~~~~~~~~ri~-~~~~~~~~~~-~~~~~v~~e~~~--~~~-------------------~~~- 310 (384)
T 2bi7_A 256 KFTYQGDYQ-GCAVMNYCSVDVPYTRIT-EHKYFSPWEQ-HDGSVCYKEYSR--ACE-------------------END- 310 (384)
T ss_dssp EEEEESCSS-SSSEEEECSTTSSSSEEE-EGGGGCTTSC-CSEEEEEEEEEE--ECC-------------------TTC-
T ss_pred EEEeCCCCC-CCEEEEecCCCCCeeeEE-EeeccCCCCC-CCCEEEEEEEec--ccc-------------------CCC-
Confidence 888872222 2223344321 222221 1222222222 234444443321 111 000
Q ss_pred cccccCceEEEEEEEEeCCceeccCCCCC----CCCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 016397 298 SADQSKAKIVKYHVVKTPRSVYKTIPNCE----PCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 372 (390)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~a~~~~~~g~~----~~~~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~ 372 (390)
. |. .|.+..+.. +.+. .....+||+|||.+....| .+|++++.||..+|+++++.+
T Consensus 311 -------~---------p~-ypv~~~~~~~~~~~~~~-~~~~~~~~~~~Gr~~~~~~-~~~~d~i~sa~~~a~~~~~~~ 370 (384)
T 2bi7_A 311 -------I---------PY-YPIRQMGEMALLEKYLS-LAENETNITFVGRLGTYRY-LDMDVTIAEALKTAEVYLNSL 370 (384)
T ss_dssp -------C---------CC-EECCCHHHHHHHHHHHH-HHTTCSSEEECHHHHTTCC-CCHHHHHHHHHHHHHHHHHHH
T ss_pred -------c---------cc-cccCChhHHHHHHHHHH-HHhcCCCEEEccccEEEEe-CCHHHHHHHHHHHHHHHhhhh
Confidence 0 00 111111110 0011 1112479999999876555 589999999999999997654
No 31
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.46 E-value=1.6e-11 Score=121.51 Aligned_cols=223 Identities=16% Similarity=0.141 Sum_probs=140.7
Q ss_pred CCChhhHHHHHcCCCCCCHHHHHHhhhhhHHHHhcccc---ccccccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCC
Q 016397 22 PAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQA---YVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFIN 98 (390)
Q Consensus 22 ~~P~~~~~~ll~~~~~ls~~~k~r~~~~~~~~~~~~~~---~~~~~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~ 98 (390)
..|.+.. +++++ +.|++.+|.++.+++.... .... .+..++.+|+.+||+++++++.+.+ ++.-.+ +++ +
T Consensus 270 ~VPas~~-eif~s-~~Lsl~EKr~L~kFl~~~~-~~~~~p~~~~~~d~~S~~d~L~~~~ls~~L~~-~L~~~l-al~--~ 342 (650)
T 1vg0_A 270 QVPCSRA-DVFNS-KQLTMVEKRMLMKFLTFCV-EYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQY-FVLHSI-AMT--S 342 (650)
T ss_dssp ECCCSHH-HHHHC-SSSCHHHHHHHHHHHHHHH-TGGGCHHHHHTTTTSBHHHHHTTSSSCHHHHH-HHHHHT-TC----
T ss_pred ECCCCHH-HHHhC-cCCCHHHHHHHHHHHHHHH-HhccChHHHhhhccCCHHHHHHHhCCCHHHHH-HHHHHH-hcc--C
Confidence 3454444 78888 8999999999887665443 2221 2346789999999999977776655 443322 332 1
Q ss_pred cccccHHHHHHHHHHHhc--ccCC-ceEEeecCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECCC-CCEEEEEEcCC
Q 016397 99 PDELSMQCILIALNRFLQ--EKHG-SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNG 174 (390)
Q Consensus 99 ~~~~Sa~~~~~~l~~~~~--~~~~-~~~~~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~-g~v~~V~~~~g 174 (390)
.+..++...+..+..++. ...+ ..+.|+.||+ +.|+++|++.++..||+|+++++|++|..+++ |++++|+..+|
T Consensus 343 ~~~~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG~-g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~G 421 (650)
T 1vg0_A 343 ETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQ-GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFG 421 (650)
T ss_dssp CCSCBHHHHHHHHHHHHHHTTSSSSSSEEEETTCT-THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTS
T ss_pred CCCCchhHHHHHHHHHHHHHHhhccCceEEeCCch-hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCC
Confidence 222455555433333321 1122 3578999997 89999999999999999999999999998643 77888887789
Q ss_pred eEEEcCEEEEecChhhHhhhcCcchhccHHHHHhhcCCCccEEEEEEEeCcccccc----CCc-eeecCCC-c-chhh-h
Q 016397 175 NVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT----YDH-LLFSRSS-L-LSVY-A 246 (390)
Q Consensus 175 ~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~----~~~-~~~~~~~-~-~~~~-~ 246 (390)
+++.||+||++. .. +|... ..+..+..+..+.+.+++++... ... ++++... . ..++ .
T Consensus 422 e~i~A~~VVs~~--~~----lp~~~--------~~~~~~~~v~R~i~i~~~pi~~~~~~~~~~~iiiP~~~g~~~~V~i~ 487 (650)
T 1vg0_A 422 QRIISKHFIIED--SY----LSENT--------CSRVQYRQISRAVLITDGSVLRTDADQQVSILTVPAEEPGSFAVRVI 487 (650)
T ss_dssp CEEECSEEEEEG--GG----BCTTT--------TTTCCCEEEEEEEEEESSCSSCCSCCCCCEEEEECCSSTTSCCEEEE
T ss_pred CEEEcCEEEECh--hh----cCHhH--------hccccccceEEEEEEecCCCCCcCCCcceEEEEccCccCCCCCEEEE
Confidence 999999999932 21 23221 11224566888889999876421 112 2232210 0 0111 0
Q ss_pred hcccccccccCCCCcEEEEEe
Q 016397 247 DMSLTCKEYYNPNQSMLELVF 267 (390)
Q Consensus 247 ~~s~~~~~~a~~g~~ll~~~~ 267 (390)
.++. ....+|+|.+++.++.
T Consensus 488 ~~Ss-~~~~cP~G~~Vv~lst 507 (650)
T 1vg0_A 488 ELCS-STMTCMKGTYLVHLTC 507 (650)
T ss_dssp EECG-GGTSSCTTCEEEEEEE
T ss_pred EeCC-CCCCCCCCCEEEEEEe
Confidence 1222 3345788888877653
No 32
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.44 E-value=4.8e-11 Score=114.53 Aligned_cols=283 Identities=13% Similarity=0.072 Sum_probs=161.9
Q ss_pred HHHcCCCCCCHHHHHHhhhhhHHHHhcccc------ccccccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCCccccc
Q 016397 30 AILRNNEMLTWPEKVKFAIGLLPAIIGGQA------YVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELS 103 (390)
Q Consensus 30 ~ll~~~~~ls~~~k~r~~~~~~~~~~~~~~------~~~~~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~~~~~S 103 (390)
+.++. .++++.+|.++.+.+.... .... .....+++|+.+|+++++.++.+.+ ++...+....+.++.+.+
T Consensus 127 ~~~~~-~l~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~~~~~~~~~~~p 203 (433)
T 1d5t_A 127 EALAS-NLMGMFEKRRFRKFLVFVA-NFDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVID-FTGHALALYRTDDYLDQP 203 (433)
T ss_dssp HHHHC-SSSCHHHHHHHHHHHHHHH-HCCTTCGGGGTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTSCCSSSGGGGSB
T ss_pred HHhhC-cccChhhHHHHHHHHHHHH-hhcccCchhccccccccCCHHHHHHHcCCCHHHHH-HHHHHHHhccCCCccCCC
Confidence 44445 5778877766654332221 1111 0113578999999999866665544 544332222223455666
Q ss_pred HHHHHHHHHHHhc--ccC-CceEEeecCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcC
Q 016397 104 MQCILIALNRFLQ--EKH-GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGD 180 (390)
Q Consensus 104 a~~~~~~l~~~~~--~~~-~~~~~~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad 180 (390)
+...+..+..+.. ... ...+.+|+||+ +.|+++|++.+++.|++|+++++|++|..+ ++++++|.+ +|+++.||
T Consensus 204 ~~~~~~~~~~~~~s~~~~g~~~~~~p~gG~-~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~~-~g~~~~ad 280 (433)
T 1d5t_A 204 CLETINRIKLYSESLARYGKSPYLYPLYGL-GELPQGFARLSAIYGGTYMLNKPVDDIIME-NGKVVGVKS-EGEVARCK 280 (433)
T ss_dssp SHHHHHHHHHHHHSCCSSSCCSEEEETTCT-THHHHHHHHHHHHHTCCCBCSCCCCEEEEE-TTEEEEEEE-TTEEEECS
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEeCcCH-HHHHHHHHHHHHHcCCEEECCCEEEEEEEe-CCEEEEEEE-CCeEEECC
Confidence 6544433333322 111 23467999997 899999999999999999999999999985 566765664 78889999
Q ss_pred EEEEecChhhHhhhcCcchhccHHHHHhhcCCCccEEEEEEEeCccccc----cCCceeecC-----CCcchhhhhcccc
Q 016397 181 AYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKN----TYDHLLFSR-----SSLLSVYADMSLT 251 (390)
Q Consensus 181 ~VI~a~p~~~~~~ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~----~~~~~~~~~-----~~~~~~~~~~s~~ 251 (390)
+||+|+++... .+.. +. +..+. +.+ +++++.. ....+++.. .+...+. ..+ .
T Consensus 281 ~VV~a~~~~~~--~~~~----------~~--~~~~~--~~i-l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~-~~s-~ 341 (433)
T 1d5t_A 281 QLICDPSYVPD--RVRK----------AG--QVIRI--ICI-LSHPIKNTNDANSCQIIIPQNQVNRKSDIYVC-MIS-Y 341 (433)
T ss_dssp EEEECGGGCGG--GEEE----------EE--EEEEE--EEE-ESSCCTTSTTCSSEEEEECGGGTTCSSCEEEE-EEE-G
T ss_pred EEEECCCCCcc--cccc----------cC--cceeE--EEE-EcCcccccCCCceEEEEeCccccCCCCCEEEE-EEC-C
Confidence 99999987631 1111 11 11122 222 6776532 112233332 1221111 233 4
Q ss_pred cccccCCCCcEEEEEe-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCccccccCceEEEEEEEEeCCceeccCCCCCCCCC
Q 016397 252 CKEYYNPNQSMLELVF-APAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRP 330 (390)
Q Consensus 252 ~~~~a~~g~~ll~~~~-~~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~ 330 (390)
++..+|+|++++.+.. .+.. +.++ .+...++++.|... ..+.... .|. |..
T Consensus 342 d~~~aP~G~~~~~~~~~~p~~-----~~~~---~l~~~~~~l~~~~~-------~~~~~~~------~~~--~~~----- 393 (433)
T 1d5t_A 342 AHNVAAQGKYIAIASTTVETT-----DPEK---EVEPALGLLEPIDQ-------KFVAISD------LYE--PID----- 393 (433)
T ss_dssp GGTSSCTTCEEEEEEEECCSS-----CHHH---HTHHHHTTTCSCSE-------EEEEEEE------EEE--ESC-----
T ss_pred CCcccCCCCEEEEEEEecCCC-----CHHH---HHHHHHHHhhhHHh-------heeccce------eee--ecC-----
Confidence 5667899988776543 3321 2222 23344444555432 2332221 111 110
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
....+|||+++++-.. ..+|+++.+++..-++|..
T Consensus 394 --~~~~~~~~~~~~~d~~---~~~e~~~~~~~~~~~~~~~ 428 (433)
T 1d5t_A 394 --DGSESQVFCSCSYDAT---THFETTCNDIKDIYKRMAG 428 (433)
T ss_dssp --CSTTTCEEECCCCCSC---SBSHHHHHHHHHHHHHHHS
T ss_pred --CCCCCCEEECCCCCcc---ccHHHHHHHHHHHHHHHhC
Confidence 1123799999987766 5689999999998888763
No 33
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.40 E-value=7e-13 Score=124.95 Aligned_cols=231 Identities=13% Similarity=0.107 Sum_probs=149.5
Q ss_pred ccccCccHHHHHHHcCCChHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHHhc--ccC-CceE-EeecCCCCccchHH
Q 016397 62 EAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ--EKH-GSKM-AFLDGNPPERLCLP 137 (390)
Q Consensus 62 ~~~d~~s~~e~l~~~g~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~--~~~-~~~~-~~~~GG~~~~l~~~ 137 (390)
...+++|+.||+.++ +++++++.++.|++.++|+.+++++|+.++. .+..... +.. ...+ ++|+||+ ++|+++
T Consensus 152 ~~~~~~s~~e~~~~~-~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~-Rvp~~~~~d~~yf~~~~qg~P~gGy-~~l~e~ 228 (397)
T 3hdq_A 152 KVEQVRTSEDVVVSK-VGRDLYNKFFRGYTRKQWGLDPSELDASVTA-RVPTRTNRDNRYFADTYQAMPLHGY-TRMFQN 228 (397)
T ss_dssp CCSSCCBHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCGGGSBTTTGG-GSCCCSSCCCBSCCCSEEEEETTCH-HHHHHH
T ss_pred CCCCCcCHHHHHHHh-cCHHHHHHHHHHHhCchhCCCHHHHHHHHHH-hcCcccccCccchhhhheeccCCCH-HHHHHH
Confidence 346789999999998 9999999999999999999999999998553 1111111 110 1234 4799997 789888
Q ss_pred HHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhHhhhcCcchhccHHHHHhhcCCCccEE
Q 016397 138 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVI 217 (390)
Q Consensus 138 l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~~l~~~~~~ 217 (390)
|++ ..|++|++|++|+++ +..+.+|+||+|+|++.+... .+.+++|.++.
T Consensus 229 l~~---~~g~~V~l~~~v~~~---------------~~~~~~d~vI~T~P~d~~~~~------------~~g~L~yrsl~ 278 (397)
T 3hdq_A 229 MLS---SPNIKVMLNTDYREI---------------ADFIPFQHMIYTGPVDAFFDF------------CYGKLPYRSLE 278 (397)
T ss_dssp HTC---STTEEEEESCCGGGT---------------TTTSCEEEEEECSCHHHHTTT------------TTCCCCEEEEE
T ss_pred HHh---ccCCEEEECCeEEec---------------cccccCCEEEEcCCHHHHHHH------------hcCCCCCceEE
Confidence 864 458999999999832 223468999999999776431 13467899999
Q ss_pred EEEEEeCccccccCCceeecC-CCcchhhhhcccccccccCCCCcEEEEEecC--CCCCCCCCHHHHHHHHHHHHHHhCC
Q 016397 218 NIHIWFDRKLKNTYDHLLFSR-SSLLSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISCSDSEIIDATMKELAKLFP 294 (390)
Q Consensus 218 ~v~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~a~~g~~ll~~~~~~--~~~~~~~~~ee~~~~~~~~l~~~~p 294 (390)
.+.+.++.+...+..++.+.+ +++..+. .+++. +. .+.++++++.-+.. .+++-...+++-.+...+-++..
T Consensus 279 ~~~~~~~~~~~~~~~~vn~~d~~p~tRi~-e~k~~-~~-~~~~~t~i~~Ey~~~~~~pyYpv~~~~~~~~~~~y~~~a-- 353 (397)
T 3hdq_A 279 FRHETHDTEQLLPTGTVNYPNDYAYTRVS-EFKHI-TG-QRHHQTSVVYEYPRAEGDPYYPVPRPENAELYKKYEALA-- 353 (397)
T ss_dssp EEEEEESSSCSCSSSEEECSSSSSCSEEE-EHHHH-HC-CCCSSEEEEEEEEESSSSCCEECCSHHHHHHHHHHHHHH--
T ss_pred EEEEEeccccCCCCeEEEeCCCCcceEEE-eeccc-CC-CCCCCEEEEEEECCCCCccccccCchhHHHHHHHHHHHH--
Confidence 999999876543433444443 3554432 22221 11 13356776654431 12221222222222221111100
Q ss_pred CCccccccCceEEEEEEEEeCCceeccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 295 DEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
...+||+|+|......| -.|+.++.+|..+++++++
T Consensus 354 ---------------------------------------~~~~~v~~~GRlg~y~Y-~~md~~i~~al~~~~~~~~ 389 (397)
T 3hdq_A 354 ---------------------------------------DAAQDVTFVGRLATYRY-YNMDQVVAQALATFRRLQG 389 (397)
T ss_dssp ---------------------------------------HHCTTEEECSTTTTTCC-CCHHHHHHHHHHHHHHHHC
T ss_pred ---------------------------------------hcCCCEEEcccceEEEe-ccHHHHHHHHHHHHHHHhc
Confidence 01358999998888777 4899999999999998865
No 34
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.92 E-value=1.1e-10 Score=97.88 Aligned_cols=98 Identities=21% Similarity=0.157 Sum_probs=72.2
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCccccccCceEEEE--EEEEeCC-----ceec-cCCCCC-CCCCCCCCCCCCeE
Q 016397 270 AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKY--HVVKTPR-----SVYK-TIPNCE-PCRPLQRSPVEGFY 340 (390)
Q Consensus 270 ~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~--~~~~~~~-----a~~~-~~~g~~-~~~~~~~~~~~~l~ 340 (390)
+..+..++++++++.++++|.++|+... ..+..+ ..++|.. +.|. ..||+. ...+.+.+|.++||
T Consensus 48 A~~~~~l~~~e~~~~~l~~L~~~~g~~~------~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~p~grl~ 121 (181)
T 2e1m_C 48 AARWDSFDDAERYGYALENLQSVHGRRI------EVFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVRPEGPVY 121 (181)
T ss_dssp HHHHTTSCTTTTHHHHHHHHHHHHCGGG------GGTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHSCBTTEE
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHhCCCc------HhhccCcceecccCCCCCCCCcccCcCCCchHHHHHHHhCCCCcEE
Confidence 4556778999999999999999995321 123345 6677743 4454 345643 22344556778999
Q ss_pred EecccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 016397 341 LAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 374 (390)
Q Consensus 341 ~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~~ 374 (390)
|||++++. |+++|+||+.||++||++|+..++.
T Consensus 122 FAGe~ts~-~~g~~eGAl~SG~raA~~i~~~l~~ 154 (181)
T 2e1m_C 122 FAGEHVSL-KHAWIEGAVETAVRAAIAVNEAPVG 154 (181)
T ss_dssp ECSGGGTT-STTSHHHHHHHHHHHHHHHHTCCC-
T ss_pred EEEHHHcC-CccCHHHHHHHHHHHHHHHHHHhcc
Confidence 99999996 8899999999999999999987753
No 35
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.04 E-value=1.3e-05 Score=74.75 Aligned_cols=112 Identities=13% Similarity=0.160 Sum_probs=69.9
Q ss_pred ccccCccHHHHHH-HcCCChHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHHhcccCCceEEeecCCCCccchHHHHH
Q 016397 62 EAQDGLTVQEWMR-KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVE 140 (390)
Q Consensus 62 ~~~d~~s~~e~l~-~~g~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~~~~~~~~~~~GG~~~~l~~~l~~ 140 (390)
..+|++|+++||+ +.++++..++.+ ..++ ......++|+..++.. ...-..+.++..+.||+ ++|+++|++
T Consensus 257 ~~lD~~S~~~~L~~~~g~s~~~~~~~-~~~~---~~~~~~~~s~l~~l~~---~~~~~~~~~~~~i~GG~-~~l~~~l~~ 328 (376)
T 2e1m_A 257 RDFDGYSMGRFLREYAEFSDEAVEAI-GTIE---NMTSRLHLAFFHSFLG---RSDIDPRATYWEIEGGS-RMLPETLAK 328 (376)
T ss_dssp HHHTTCBHHHHHHHTSCCCHHHHHHH-HHHT---TCTTTTTSBHHHHHHH---CSCSCTTCCEEEETTCT-THHHHHHHH
T ss_pred HHHhCCCHHHHHhhccCCCHHHHHHH-Hhhc---CccccchhhHHHHHHH---hhhhccCCceEEECCcH-HHHHHHHHH
Confidence 3579999999999 788999887744 3332 1223346777665542 11112234567789996 899999998
Q ss_pred HHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEec
Q 016397 141 HIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFAT 186 (390)
Q Consensus 141 ~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~ 186 (390)
.| +.+|++|++|++|..+++|.. |...+.......+|++.+
T Consensus 329 ~l---~~~i~l~~~V~~I~~~~~gv~--v~~~~~~~~~g~~~~~~~ 369 (376)
T 2e1m_A 329 DL---RDQIVMGQRMVRLEYYDPGRD--GHHGELTGPGGPAVAIQT 369 (376)
T ss_dssp HG---GGTEECSEEEEEEEECCCC---------------CCEEEEE
T ss_pred hc---CCcEEecCeEEEEEECCCceE--EEeCCCcCCCCCeeEEEe
Confidence 77 568999999999999766632 333222233456777754
No 36
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.96 E-value=0.00036 Score=65.57 Aligned_cols=199 Identities=14% Similarity=0.171 Sum_probs=104.0
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh--HhhhcCcchhccHHHHHhhc
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI--LKLQLPENWKEMAYFKRLEK 210 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~--~~~ll~~~~~~~~~~~~~~~ 210 (390)
.+.+.|.+.+++.|++|+++++|++|..+ ++++++|++.+| ++.||.||+|+.... +...+.- .
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~------------~ 240 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGF------------E 240 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTC------------C
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCC------------C
Confidence 57788888888899999999999999985 455657888777 699999999998743 2222110 0
Q ss_pred CCCccEEEEEEEeCccccccCCceeecCCCcchhhhhcccccccccCCCCcEEEEEecCCCCCCCCCHHHHHHHHHHHHH
Q 016397 211 LVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELA 290 (390)
Q Consensus 211 l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~a~~g~~ll~~~~~~~~~~~~~~~ee~~~~~~~~l~ 290 (390)
+...+...-.+.+ ++........++.... .++ ..+ .+++.-++..............+++..+.+++.+.
T Consensus 241 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~y-----~~p--~~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~~~~ 310 (405)
T 2gag_B 241 LPIQSHPLQALVS-ELFEPVHPTVVMSNHI--HVY-----VSQ--AHKGELVMGAGIDSYNGYGQRGAFHVIQEQMAAAV 310 (405)
T ss_dssp CCEEEEEEEEEEE-EEBCSCCCSEEEETTT--TEE-----EEE--CTTSEEEEEEEECSSCCCSSCCCTHHHHHHHHHHH
T ss_pred CCccccceeEEEe-cCCccccCceEEeCCC--cEE-----EEE--cCCCcEEEEeccCCCCccccCCCHHHHHHHHHHHH
Confidence 1111111111222 2222111112211110 010 011 01222233333221111222233556778888999
Q ss_pred HhCCCCccccccCceEEEEEEEEeCCceeccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 291 KLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 291 ~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
+++|.+.+ .++...+. +.+..+++.....- ..+.+|+|++.-+.. .|+..|...|+.+|+.|..
T Consensus 311 ~~~p~l~~-----~~~~~~w~-----g~~~~t~d~~p~ig--~~~~~~l~~~~G~~g----~G~~~a~~~g~~la~~i~g 374 (405)
T 2gag_B 311 ELFPIFAR-----AHVLRTWG-----GIVDTTMDASPIIS--KTPIQNLYVNCGWGT----GGFKGTPGAGFTLAHTIAN 374 (405)
T ss_dssp HHCGGGGG-----CEECEEEE-----EEEEEETTSCCEEE--ECSSBTEEEEECCGG----GCSTTHHHHHHHHHHHHHH
T ss_pred HhCCcccc-----CCcceEEe-----eccccCCCCCCEec--ccCCCCEEEEecCCC----chhhHHHHHHHHHHHHHhC
Confidence 99997642 22322211 11112232211100 012578888764433 3677788899999999986
Q ss_pred H
Q 016397 371 D 371 (390)
Q Consensus 371 ~ 371 (390)
.
T Consensus 375 ~ 375 (405)
T 2gag_B 375 D 375 (405)
T ss_dssp T
T ss_pred C
Confidence 4
No 37
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.83 E-value=0.00024 Score=65.71 Aligned_cols=58 Identities=10% Similarity=0.138 Sum_probs=48.2
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCC--eEEEcCEEEEecChhh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPVDI 190 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g--~~~~ad~VI~a~p~~~ 190 (390)
..+.+.|.+.+++.|++|+++++|++|..++++.+ .|++.+| .+++||.||+|+....
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGF-ELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSE-EEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceE-EEEECCCceeEEEeCEEEECCCcch
Confidence 36778888888899999999999999998655535 4888887 4799999999998753
No 38
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.78 E-value=2.8e-05 Score=60.45 Aligned_cols=106 Identities=10% Similarity=0.017 Sum_probs=53.5
Q ss_pred eEEEcCEEEEecChhhHhhhcCcchhccHHHHHhhcCCCccEEEEEEEeCccccccCCceeecCCCcchhhhhccccccc
Q 016397 175 NVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKE 254 (390)
Q Consensus 175 ~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 254 (390)
++++||+||+|+|+.+++.+.-....|....++++++.|....|+.+.|+++||..- ...+ +.+.. +
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~-~~~g----------d~s~~-~- 70 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRFVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFT-EADW----------KRELD-A- 70 (130)
T ss_dssp EEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCC-HHHH----------HHHHH-H-
T ss_pred eEEEcCEEEEcCCHHHHhcCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCC-Cccc----------cccCC-C-
Confidence 468999999999999999873211245567788999999999999999999999631 1100 11100 0
Q ss_pred ccCCCCcEEEEE-ec-CCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 016397 255 YYNPNQSMLELV-FA-PAEEWISCSDSEIIDATMKELAKLFPDE 296 (390)
Q Consensus 255 ~a~~g~~ll~~~-~~-~~~~~~~~~~ee~~~~~~~~l~~~~p~~ 296 (390)
..++ .++.++ ++ .+.+|..+++ +..+.++..|.+++|+.
T Consensus 71 -~~pg-~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~ 111 (130)
T 2e1m_B 71 -IAPG-LYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSV 111 (130)
T ss_dssp -HSTT-HHHHHHHHCCCSCCCC----------------------
T ss_pred -CCCe-EEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCC
Confidence 0111 222233 13 3456777766 55678999999999964
No 39
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.69 E-value=0.0023 Score=59.55 Aligned_cols=204 Identities=13% Similarity=0.147 Sum_probs=105.8
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh--HhhhcCcchhccHHHHHhh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI--LKLQLPENWKEMAYFKRLE 209 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~--~~~ll~~~~~~~~~~~~~~ 209 (390)
..+.+.|.+.+++.|++|+++++|++|..+ ++.+++|++.+| +++||.||+|+.... +...+... .
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~----------~ 216 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIK----------T 216 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCC----------S
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCC----------c
Confidence 356777888888899999999999999985 455656888777 799999999998753 22211100 0
Q ss_pred cCCCccEEEEEEEeCccccccCC-ceeecCCCcchhhhhcccccccccCCCCcEEEEE-ecCCCCCCCCCHHHHHHHHHH
Q 016397 210 KLVGVPVINIHIWFDRKLKNTYD-HLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELV-FAPAEEWISCSDSEIIDATMK 287 (390)
Q Consensus 210 ~l~~~~~~~v~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~a~~g~~ll~~~-~~~~~~~~~~~~ee~~~~~~~ 287 (390)
.+.-.+.-.-.+.++. ...... ..++... ...++ ..+ .+++ -++... ......+....+++..+.+++
T Consensus 217 ~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~-~~~~y-----~~p--~~~g-~~iG~~~~~~~~~~~~~~~~~~~~~l~~ 286 (382)
T 1y56_B 217 KIPIEPYKHQAVITQP-IKRGTINPMVISFK-YGHAY-----LTQ--TFHG-GIIGGIGYEIGPTYDLTPTYEFLREVSY 286 (382)
T ss_dssp CCCCEEEEEEEEEECC-CSTTSSCSEEEEST-TTTEE-----EEC--CSSS-CCEEECSCCBSSCCCCCCCHHHHHHHHH
T ss_pred CcCCCeeEeEEEEEcc-CCcccCCCeEEecC-CCeEE-----EEE--eCCe-EEEecCCCCCCCCCCCCCCHHHHHHHHH
Confidence 0111222222233332 111111 1222111 00111 001 1122 222221 111112222344667778889
Q ss_pred HHHHhCCCCccccccCceEEEEEEEEeCCceeccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHH
Q 016397 288 ELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 367 (390)
Q Consensus 288 ~l~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~ 367 (390)
.+.+++|.+.. .++... | .+....+++.....-. ....+|+|++.-+.. .|+.-|...|+.+|+.
T Consensus 287 ~~~~~~p~l~~-----~~~~~~----~-~g~r~~t~d~~p~ig~-~~~~~~~~~~~G~~g----~G~~~a~~~g~~la~~ 351 (382)
T 1y56_B 287 YFTKIIPALKN-----LLILRT----W-AGYYAKTPDSNPAIGR-IEELNDYYIAAGFSG----HGFMMAPAVGEMVAEL 351 (382)
T ss_dssp HHHHHCGGGGG-----SEEEEE----E-EEEEEECTTSCCEEEE-ESSSBTEEEEECCTT----CHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCcCC-----CCceEE----E-EeccccCCCCCcEecc-CCCCCCEEEEEecCc----chHhhhHHHHHHHHHH
Confidence 99999997642 233322 2 1111222322111000 012479988863332 4788899999999999
Q ss_pred HHHHh
Q 016397 368 IVQDY 372 (390)
Q Consensus 368 il~~~ 372 (390)
|....
T Consensus 352 i~~~~ 356 (382)
T 1y56_B 352 ITKGK 356 (382)
T ss_dssp HHHSS
T ss_pred HhCCC
Confidence 98753
No 40
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.69 E-value=0.0016 Score=60.53 Aligned_cols=208 Identities=13% Similarity=0.135 Sum_probs=108.9
Q ss_pred EEeecCCCC--ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhHhhhcCcchh
Q 016397 123 MAFLDGNPP--ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWK 200 (390)
Q Consensus 123 ~~~~~GG~~--~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~~~ll~~~~~ 200 (390)
+.++.++.- ..+.+.|.+.+++.|++|+++++|++|..++ +.+ +|++.+| +++||.||+|+..... .+++..
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~-~v~~~~g-~~~a~~vV~A~G~~s~-~l~~~~-- 226 (382)
T 1ryi_A 153 SFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDG-EAL-FIKTPSG-DVWANHVVVASGVWSG-MFFKQL-- 226 (382)
T ss_dssp EEETTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSS-SSE-EEEETTE-EEEEEEEEECCGGGTH-HHHHHT--
T ss_pred EEeCCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC-CEE-EEEcCCc-eEEcCEEEECCChhHH-HHHHhc--
Confidence 334454421 3467788888888999999999999999854 446 5887766 7999999999987532 221110
Q ss_pred ccHHHHHhhcCCCccEEEEEEEeCccccccCCceeecCCCcchhhhhcccccccccCCCCcEEEEEecCCCCCCCCCHHH
Q 016397 201 EMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSE 280 (390)
Q Consensus 201 ~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~a~~g~~ll~~~~~~~~~~~~~~~ee 280 (390)
. ..+...+.-...+.++.+.. .....++.+ ..+ ..| .+++.-++..+.. ...+....+++
T Consensus 227 ~-------~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~----~~~-----~~p--~~~g~~~vG~~~~-~~~~~~~~~~~ 286 (382)
T 1ryi_A 227 G-------LNNAFLPVKGECLSVWNDDI-PLTKTLYHD----HCY-----IVP--RKSGRLVVGATMK-PGDWSETPDLG 286 (382)
T ss_dssp T-------CCCCCEEEEEEEEEEECCSS-CCCSEEEET----TEE-----EEE--CTTSEEEEECCCE-ETCCCCSCCHH
T ss_pred C-------CCCceeccceEEEEECCCCC-CccceEEcC----CEE-----EEE--cCCCeEEEeeccc-ccCCCCCCCHH
Confidence 0 01112222223333432211 111222211 010 011 0122112222111 11233334566
Q ss_pred HHHHHHHHHHHhCCCCccccccCceEEEEEEEEeCCceeccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchhHHHHH
Q 016397 281 IIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLS 360 (390)
Q Consensus 281 ~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~S 360 (390)
..+.+++.+.+++|.+.. ..+...+. +.....++....... ....+|+|+++.+.. .|+..|..+
T Consensus 287 ~~~~l~~~~~~~~p~l~~-----~~~~~~w~-----g~~~~t~d~~p~ig~-~~~~~~l~~~~G~~g----~G~~~a~~~ 351 (382)
T 1ryi_A 287 GLESVMKKAKTMLPAIQN-----MKVDRFWA-----GLRPGTKDGKPYIGR-HPEDSRILFAAGHFR----NGILLAPAT 351 (382)
T ss_dssp HHHHHHHHHHHHCGGGGG-----SEEEEEEE-----EEEEECSSSCCEEEE-ETTEEEEEEEECCSS----CTTTTHHHH
T ss_pred HHHHHHHHHHHhCCCcCC-----CceeeEEE-----EecccCCCCCcEecc-CCCcCCEEEEEcCCc----chHHHhHHH
Confidence 778899999999997642 22322211 111112222111000 011468998875533 378888999
Q ss_pred HHHHHHHHHHH
Q 016397 361 GKLCAQAIVQD 371 (390)
Q Consensus 361 G~~aA~~il~~ 371 (390)
|+.+|+.|...
T Consensus 352 g~~la~~i~~~ 362 (382)
T 1ryi_A 352 GALISDLIMNK 362 (382)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHhCC
Confidence 99999998754
No 41
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.62 E-value=0.0054 Score=53.43 Aligned_cols=87 Identities=20% Similarity=0.214 Sum_probs=58.0
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCccccccCceEEEEEEEEeCCceeccCCCCCCCCCCCCCCCCCeEEecccccCCCCCch
Q 016397 275 SCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASM 354 (390)
Q Consensus 275 ~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~l~~aGd~~~~~~~~~~ 354 (390)
.....+..+.....+....+... ..+......+|..+.+..... .+...+..+|||+|||++.+ +++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~w~~a~~~~~~~----~~~~~~~~~~v~l~GDa~~g---~gv 309 (336)
T 3kkj_A 243 DASREQVIEHLHGAFAELIDCTM------PAPVFSLAHRWLYARPAGAHE----WGALSDADLGIYVCGDWCLS---GRV 309 (336)
T ss_dssp TSCHHHHHHHHHHHHHTTCSSCC------CCCSEEEEEEEEEEEESSCCC----CSSEEETTTTEEECCGGGTT---SSH
T ss_pred cccchhhhhhhhhhhhhhccCCc------CcchheeccceeecccccccC----ccceeeCCCCEEEEecccCC---cCH
Confidence 34556666667777766664432 134455667776654432211 11222345799999999876 689
Q ss_pred hHHHHHHHHHHHHHHHHhhh
Q 016397 355 EGAVLSGKLCAQAIVQDYVL 374 (390)
Q Consensus 355 ~gA~~SG~~aA~~il~~~~~ 374 (390)
++|+.||+.||+.|++.|+.
T Consensus 310 ~~A~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 310 EGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999998864
No 42
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.53 E-value=0.0026 Score=59.40 Aligned_cols=56 Identities=11% Similarity=0.106 Sum_probs=44.7
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc---CCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~~~~ad~VI~a~p~~ 189 (390)
.+.+.|.+.+++.|++|+++++|++|..+ ++.+++|++. ++.+++||.||.|....
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~ 161 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcc
Confidence 45677888888889999999999999986 5556557663 45689999999998764
No 43
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.50 E-value=0.0026 Score=60.93 Aligned_cols=62 Identities=21% Similarity=0.165 Sum_probs=46.9
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc---CCe--EEEcCEEEEecChhh-Hhhhc
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI-LKLQL 195 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~~~-~~~ll 195 (390)
.+.+.|.+.+.+.|++|+++++|++|..+ ++.+++|++. +|+ +++||.||.|..... +.+.+
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l 168 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKL 168 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGS
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhc
Confidence 45677777777889999999999999985 4556556654 675 789999999987643 44444
No 44
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.47 E-value=0.007 Score=61.03 Aligned_cols=56 Identities=16% Similarity=0.157 Sum_probs=47.4
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
..+...|.+.+++.|++|+++++|++|..+++ .+ .|++.+|+++.||.||+|+...
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~-~v-~V~t~~G~~i~Ad~VVlAtG~~ 472 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKDD-CW-LLNFAGDQQATHSVVVLANGHQ 472 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETT-EE-EEEETTSCEEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCC-eE-EEEECCCCEEECCEEEECCCcc
Confidence 35778888888889999999999999998644 45 5888888789999999999876
No 45
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.46 E-value=0.0079 Score=59.52 Aligned_cols=57 Identities=25% Similarity=0.330 Sum_probs=46.6
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc------CC---------eEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT------NG---------NVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~------~g---------~~~~ad~VI~a~p~~ 189 (390)
.+.+.|.+.+++.|++|+++++|++|..++++++++|++. +| .+++||.||.|....
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~ 216 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCH 216 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTT
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCC
Confidence 4567788888888999999999999998766777678775 33 579999999998874
No 46
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.40 E-value=0.011 Score=59.78 Aligned_cols=56 Identities=13% Similarity=0.122 Sum_probs=46.6
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCe-EEEcCEEEEecChh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYVFATPVD 189 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~-~~~ad~VI~a~p~~ 189 (390)
..+.+.|.+.+++.|++|+++++|++|..++++ + .|++.+|+ +++||.||+|+...
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v-~V~t~~G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ-W-QLTFGQSQAAKHHATVILATGHR 468 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS-E-EEEEC-CCCCEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe-E-EEEeCCCcEEEECCEEEECCCcc
Confidence 357788888888899999999999999996544 5 58888876 79999999999876
No 47
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.28 E-value=0.023 Score=55.05 Aligned_cols=61 Identities=11% Similarity=-0.001 Sum_probs=47.4
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCe---EEEcCEEEEecChh-hHhhhc
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGDAYVFATPVD-ILKLQL 195 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~---~~~ad~VI~a~p~~-~~~~ll 195 (390)
.+.+.|.+.+++.|++|+++++|++|+.++++ ++ |++.+|+ +++||.||.|.... .+.+.+
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~l 172 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGDH-VV-VEVEGPDGPRSLTTRYVVGCDGGRSTVRKAA 172 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-EE-EEEECSSCEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-EE-EEEEcCCCcEEEEeCEEEEccCcccHHHHHc
Confidence 46677777787889999999999999987555 63 7777764 78999999998774 445554
No 48
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.21 E-value=0.01 Score=58.00 Aligned_cols=62 Identities=19% Similarity=0.254 Sum_probs=47.5
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCC---CEEEEEEcCC---eEEEcCEEEEecChh-hHhhhc
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDG---TVKNFLLTNG---NVIDGDAYVFATPVD-ILKLQL 195 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g---~v~~V~~~~g---~~~~ad~VI~a~p~~-~~~~ll 195 (390)
.+.+.|.+.+++.|++|+++++|++|..++++ .++ |++.++ .+++||.||.|.... .+.+.+
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~-v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~l 189 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVT-ARLAGPDGEYDLRAGYLVGADGNRSLVRESL 189 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEE-EEEEETTEEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEE-EEEEcCCCeEEEEeCEEEECCCCcchHHHHc
Confidence 56677888888889999999999999986551 353 666665 689999999998774 444544
No 49
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.20 E-value=0.0029 Score=59.74 Aligned_cols=63 Identities=16% Similarity=0.195 Sum_probs=48.0
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCe--EEEcCEEEEecChh-hHhhhc
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN--VIDGDAYVFATPVD-ILKLQL 195 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~--~~~ad~VI~a~p~~-~~~~ll 195 (390)
.+.+.|.+.+++.|++|+.+++|++|..++++.+..|.+.+|+ +++||.||.|+... .+.+++
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~ 172 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMF 172 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhc
Confidence 4567777888788999999999999998655543346667887 68999999998764 344444
No 50
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.16 E-value=0.00076 Score=64.22 Aligned_cols=58 Identities=12% Similarity=0.224 Sum_probs=50.2
Q ss_pred ccchHHHHHHHHHcCcEEEcCc---eeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNS---RVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~---~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
..+.+.|.+.+++.|++|++++ +|++|..+ ++.+++|++.+|++++||.||+|+....
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 3677888888889999999999 99999985 5567779999998899999999998764
No 51
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.16 E-value=0.018 Score=55.71 Aligned_cols=61 Identities=11% Similarity=0.096 Sum_probs=46.8
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCe---EEEcCEEEEecChh-hHhhhc
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGDAYVFATPVD-ILKLQL 195 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~---~~~ad~VI~a~p~~-~~~~ll 195 (390)
.+.+.|.+.+++.|++|+++++|++|+.++++ ++ |++.+|+ +++||.||.|.... .+.+.+
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~l 171 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAG-VT-VEVRGPEGKHTLRAAYLVGCDGGRSSVRKAA 171 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTE-EE-EEEEETTEEEEEEESEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe-EE-EEEEcCCCCEEEEeCEEEECCCcchHHHHHc
Confidence 45667777787889999999999999986554 53 7776664 78999999998774 445554
No 52
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.04 E-value=0.013 Score=54.70 Aligned_cols=63 Identities=11% Similarity=0.144 Sum_probs=47.5
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEE-cCCe--EEEcCEEEEecChh-hHhhhcC
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPVD-ILKLQLP 196 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~-~~g~--~~~ad~VI~a~p~~-~~~~ll~ 196 (390)
.+.+.|.+.+.+.|++|+++++|++|..++++.+ .|++ .+|+ +++||.||.|.... .+.+.+.
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~ 170 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGFHGISRQSIP 170 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCTTCSTGGGSC
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCCCcHHHHhcC
Confidence 4667778877778999999999999997533434 3776 6886 78999999998764 4445543
No 53
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.97 E-value=0.016 Score=52.82 Aligned_cols=56 Identities=14% Similarity=-0.067 Sum_probs=43.9
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
.+.+.+.+.+++.|.+++++++|++|..++ +.+++|++.+| ++.+|.||+|+....
T Consensus 77 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 77 EVLAYLAQYEQKYALPVLRPIRVQRVSHFG-ERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHHTTCCEECSCCEEEEEEET-TEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEECC-CcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 456667777777899999999999999854 43422777777 799999999998644
No 54
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=96.92 E-value=0.016 Score=56.35 Aligned_cols=62 Identities=15% Similarity=0.099 Sum_probs=46.4
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEE--cCCe--EEEcCEEEEecChh-hHhhhc
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNGN--VIDGDAYVFATPVD-ILKLQL 195 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~--~~g~--~~~ad~VI~a~p~~-~~~~ll 195 (390)
.+.+.|.+.+++.|++|+++++|++|..+ ++.+++|++ .+|+ +++||.||.|.... .+.+.+
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~l 178 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFE-GERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAV 178 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEE-TTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGGT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEE-CCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHHc
Confidence 46677788888889999999999999985 455555555 3574 78999999998774 334434
No 55
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=96.89 E-value=0.063 Score=49.59 Aligned_cols=60 Identities=12% Similarity=0.090 Sum_probs=42.6
Q ss_pred chHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEE-cCC--eEEEcCEEEEecChh-hHhhh
Q 016397 134 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNG--NVIDGDAYVFATPVD-ILKLQ 194 (390)
Q Consensus 134 l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~-~~g--~~~~ad~VI~a~p~~-~~~~l 194 (390)
+-..|.+.+.+.|++++++++|+.+..+ ++.+.++.. .+| .+++||.||-|...+ .+.+.
T Consensus 104 ~~~~L~~~a~~~G~~~~~~~~v~~~~~~-~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~ 167 (397)
T 3oz2_A 104 FDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRW 167 (397)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHH
T ss_pred HHHHHHHHHHhcCcEEeeeeeeeeeeec-cceeeeeeecccccceEEEEeEEEeCCccccHHHHH
Confidence 4456677777889999999999999985 455544543 234 368899999998764 33343
No 56
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.78 E-value=0.0058 Score=57.46 Aligned_cols=53 Identities=25% Similarity=0.377 Sum_probs=41.7
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
.|.+.|.+.+++ ++|+++++|++|..++++ + .|++.+|++++||.||.|....
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~-v-~v~~~~g~~~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDADG-V-TVWFTDGSSASGDLLIAADGSH 180 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEETTE-E-EEEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecCCc-E-EEEEcCCCEEeeCEEEECCCcC
Confidence 355666666644 789999999999986544 5 4888899999999999998764
No 57
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=96.75 E-value=0.012 Score=58.08 Aligned_cols=61 Identities=15% Similarity=0.177 Sum_probs=47.1
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEE--cCC-eEEEcCEEEEecChh-hHhhhc
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNG-NVIDGDAYVFATPVD-ILKLQL 195 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~--~~g-~~~~ad~VI~a~p~~-~~~~ll 195 (390)
.+.+.|.+.+++.|++|+.+++|++|+.++++ ++ |++ .+| ++++||.||.|.... .+.+.+
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~-v~-v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~l 213 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDAEA-VE-VTVAGPSGPYPVRARYGVGCDGGRSTVRRLA 213 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCSSC-EE-EEEEETTEEEEEEESEEEECSCSSCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCe-EE-EEEEeCCCcEEEEeCEEEEcCCCCchHHHHc
Confidence 45667777787789999999999999986555 53 666 677 689999999998764 444554
No 58
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.68 E-value=0.0038 Score=58.98 Aligned_cols=56 Identities=20% Similarity=0.254 Sum_probs=48.0
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
..+.+.+.+.+++.|++|+++++|++|..+ ++++++|++.+|+++.||.||+++..
T Consensus 194 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 194 EALSEFYQAEHRAHGVDLRTGAAMDCIEGD-GTKVTGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEES-SSBEEEEEESSSCEEECSEEEECSCC
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 456677788888899999999999999984 55676789999999999999999875
No 59
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=96.63 E-value=0.0023 Score=59.42 Aligned_cols=56 Identities=18% Similarity=0.091 Sum_probs=46.5
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
..+...|.+.+++.|++|+++++|++|..+++ .+ +|++.+| +++||.||+|+....
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~-~~-~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVDG-AW-EVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEETT-EE-EEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCC-eE-EEEeCCC-EEEcCEEEECCChhH
Confidence 36778888888889999999999999998644 34 5888777 799999999988753
No 60
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=96.62 E-value=0.0037 Score=59.68 Aligned_cols=66 Identities=24% Similarity=0.420 Sum_probs=52.4
Q ss_pred EeecCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 124 AFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 124 ~~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
.++..+-...+.+.|.+.+++.|++|+++++|++|..+ ++.+.+|++.+|++++||.||+|+....
T Consensus 126 ~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 126 MFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYE-NGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp EEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred EECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEec-CCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 35533223578899999999999999999999999975 4555578888887799999999987644
No 61
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.59 E-value=0.0044 Score=60.63 Aligned_cols=58 Identities=28% Similarity=0.480 Sum_probs=49.3
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
..+.+.|.+.+++.|++|+++++|++|..+ ++.+++|++.+|+++.||.||+|+....
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHME-DGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEES-SSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 357778888888899999999999999985 4557678998998999999999987654
No 62
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.57 E-value=0.0045 Score=58.23 Aligned_cols=56 Identities=18% Similarity=0.258 Sum_probs=48.1
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
..+.+.+.+.+++.|++|+++++|++|..+ ++++.+|++.+|+++.||.||+++..
T Consensus 184 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 184 PEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 456677888888999999999999999974 45676789999999999999999876
No 63
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.50 E-value=0.17 Score=50.59 Aligned_cols=63 Identities=14% Similarity=0.198 Sum_probs=46.2
Q ss_pred cchHHHHHHHHHcCc--EEEcCceeeEEEECCC--C-CEEEEEEc------CC--eEEEcCEEEEecChh-hHhhhcC
Q 016397 133 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDD--G-TVKNFLLT------NG--NVIDGDAYVFATPVD-ILKLQLP 196 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~--~I~l~~~V~~I~~~~~--g-~v~~V~~~------~g--~~~~ad~VI~a~p~~-~~~~ll~ 196 (390)
.+.+.|.+.+++.|+ +|+++++|++|..+++ + .+ .|++. +| ++++||.||.|.... .+.+.+.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v-~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 218 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPV-TVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIG 218 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCE-EEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCE-EEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhC
Confidence 456677888888887 9999999999998653 1 34 36554 46 578999999998774 4555553
No 64
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.43 E-value=0.0051 Score=59.83 Aligned_cols=57 Identities=28% Similarity=0.398 Sum_probs=47.4
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcC-Ce--EEEcC-EEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-GN--VIDGD-AYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~-g~--~~~ad-~VI~a~p~~ 189 (390)
.+.+.|.+.+++.|++|+++++|++|..+++|++++|++.+ |+ ++.|| .||+|+...
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~ 263 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSF 263 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCCh
Confidence 68899999999999999999999999996567788887754 33 58896 999988753
No 65
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.35 E-value=0.008 Score=59.32 Aligned_cols=57 Identities=23% Similarity=0.313 Sum_probs=47.3
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc--CCe--EEEcCEEEEecCh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPV 188 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~--~g~--~~~ad~VI~a~p~ 188 (390)
..+.+.|.+.+++.|++|+++++|++|..++++++++|++. +|+ ++.||.||+|+..
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGG 315 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCC
Confidence 46778888888889999999999999998644777777765 575 6899999999876
No 66
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.12 E-value=0.012 Score=58.08 Aligned_cols=57 Identities=30% Similarity=0.391 Sum_probs=46.3
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc--CCe--EEEcCEEEEecCh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPV 188 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~--~g~--~~~ad~VI~a~p~ 188 (390)
..+.+.|.+.+++.|++|+++++|++|..++++++++|++. +|+ ++.||.||+|+..
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg 315 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGG 315 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCC
Confidence 46778899999899999999999999998542677777765 564 6889999999874
No 67
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.10 E-value=0.0097 Score=58.64 Aligned_cols=58 Identities=28% Similarity=0.326 Sum_probs=47.5
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc--CCe--EEEcCEEEEecChh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVD 189 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~--~g~--~~~ad~VI~a~p~~ 189 (390)
..+.+.|.+.+++.|++|+++++|++|..++++++++|++. +|+ ++.||.||+|+...
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~ 311 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGY 311 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCc
Confidence 45778898988889999999999999998643777777765 675 68899999998753
No 68
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=96.06 E-value=0.0081 Score=57.22 Aligned_cols=57 Identities=21% Similarity=0.244 Sum_probs=46.7
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEEC--------------CCCCEEEEEEcCCeEE--EcCEEEEecChhh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELN--------------DDGTVKNFLLTNGNVI--DGDAYVFATPVDI 190 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~--------------~~g~v~~V~~~~g~~~--~ad~VI~a~p~~~ 190 (390)
.+.+.|.+.+++.|++|+++++|++|..+ +++++++|++.+| ++ .||.||+|+....
T Consensus 182 ~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 182 KVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 67788888888999999999999999971 2344656888777 58 9999999998753
No 69
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=96.05 E-value=0.0078 Score=56.86 Aligned_cols=62 Identities=18% Similarity=0.349 Sum_probs=50.2
Q ss_pred eecCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 125 FLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 125 ~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
++.... ..+.+.|.+.+++.|++|+++++|++|..++++ + .|++.+| +++||.||+|+....
T Consensus 126 ~~~~~~-~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~-~-~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 126 FCDHSA-KDIIRMLMAEMKEAGVQLRLETSIGEVERTASG-F-RVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp EESSCH-HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE-E-EEEETTE-EEEESEEEECCCCSS
T ss_pred eeCCCH-HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE-E-EEEECCc-EEEeeEEEECCCCcc
Confidence 454442 578899999999899999999999999986443 5 4888777 799999999988754
No 70
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.02 E-value=0.012 Score=54.47 Aligned_cols=60 Identities=20% Similarity=0.243 Sum_probs=47.5
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhHhhhcC
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP 196 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~~~ll~ 196 (390)
.+.+.|.+.+++.|++|+.+++|++|..++++ + .|++.+|+ ++||.||+|+.... ..+++
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-~-~v~~~~g~-~~a~~vV~a~G~~s-~~l~~ 209 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG-V-TIETADGE-YQAKKAIVCAGTWV-KDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-E-EEEESSCE-EEEEEEEECCGGGG-GGTST
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE-E-EEEECCCe-EEcCEEEEcCCccH-Hhhcc
Confidence 57788888888899999999999999986444 5 47777774 99999999998764 34443
No 71
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.92 E-value=0.019 Score=54.39 Aligned_cols=56 Identities=16% Similarity=0.227 Sum_probs=46.0
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEEC-CCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELN-DDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~-~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|..+ ++++++.|++.+|+++.+|.||+++..
T Consensus 192 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 192 PVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGL 248 (431)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 45566778888899999999999999862 245565688889988999999999875
No 72
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=95.84 E-value=0.02 Score=55.42 Aligned_cols=55 Identities=22% Similarity=0.344 Sum_probs=45.7
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|..++++.+ .|++.+|+++.+|.||+++..
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLNTDGSK-HVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCE-EEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceE-EEEECCCcEEEcCEEEECCCC
Confidence 4567778888899999999999999998544434 588888988999999999875
No 73
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=95.83 E-value=0.018 Score=55.57 Aligned_cols=55 Identities=25% Similarity=0.332 Sum_probs=45.7
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|..++++.+ .|++.+|+++.+|.||+|+..
T Consensus 232 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-~v~~~~G~~i~~D~vv~a~G~ 286 (490)
T 1fec_A 232 ELRKQLTEQLRANGINVRTHENPAKVTKNADGTR-HVVFESGAEADYDVVMLAIGR 286 (490)
T ss_dssp HHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCE-EEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEE-EEEECCCcEEEcCEEEEccCC
Confidence 4567778888899999999999999998544444 588888888999999999875
No 74
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=95.82 E-value=0.018 Score=56.14 Aligned_cols=56 Identities=21% Similarity=0.274 Sum_probs=45.5
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCE--EEEEEcCCe-EEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTV--KNFLLTNGN-VIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v--~~V~~~~g~-~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|..++++++ ..|++.+|+ ++.+|.||+|+..
T Consensus 256 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 256 ETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCC
T ss_pred HHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCC
Confidence 4567788888899999999999999998545543 247777887 8999999999875
No 75
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=95.79 E-value=0.014 Score=55.00 Aligned_cols=55 Identities=15% Similarity=0.235 Sum_probs=45.0
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
.+.+.+.+.+++.|++|+++++|++|..+ + ++.+|++.||+++.||.||+++...
T Consensus 186 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~-~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 186 RIGAWLRGLLTELGVQVELGTGVVGFSGE-G-QLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEECS-S-SCCEEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEecc-C-cEEEEEECCCCEEEcCEEEEeeCCe
Confidence 34566777788899999999999999874 3 3446889999999999999998763
No 76
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=95.76 E-value=0.021 Score=56.03 Aligned_cols=57 Identities=16% Similarity=0.216 Sum_probs=47.7
Q ss_pred cchHHHHHHHHHc-CcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 133 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 133 ~l~~~l~~~l~~~-G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
.+.+.|.+.+++. |++|+++ +|++|..++++++.+|++.+|++++||.||.|+....
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 4677788888888 9999999 9999998656666678888888899999999988743
No 77
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.76 E-value=0.02 Score=55.14 Aligned_cols=56 Identities=18% Similarity=0.200 Sum_probs=45.0
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCC-eEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-NVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g-~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|..++++++..|++.+| +++.+|.||+|+..
T Consensus 227 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 227 CIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCC
Confidence 456677788888999999999999999754452235888888 78999999999875
No 78
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=95.72 E-value=0.016 Score=53.76 Aligned_cols=55 Identities=18% Similarity=0.226 Sum_probs=45.1
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
.+...|.+.+++.|++|+++++|++|..++++ + .|++.+| +++||.||+|+....
T Consensus 151 ~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~-~v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 151 NCIRAYRELAEARGAKVLTHTRVEDFDISPDS-V-KIETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSC-E-EEEETTE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe-E-EEEeCCC-EEEeCEEEEecCccH
Confidence 56778888888899999999999999986444 5 3777655 799999999998753
No 79
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=95.72 E-value=0.016 Score=59.95 Aligned_cols=56 Identities=25% Similarity=0.244 Sum_probs=47.3
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
.+...|++.+++.|++|+++++|++|..+ ++.+++|++.+| +++||.||+|+....
T Consensus 152 ~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 152 RAVQLLIKRTESAGVTYRGSTTVTGIEQS-GGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEECCceEEEEEEe-CCEEEEEEECCc-EEECCEEEECCccch
Confidence 57788888888999999999999999985 455656888776 799999999998764
No 80
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.68 E-value=0.025 Score=54.30 Aligned_cols=55 Identities=20% Similarity=0.306 Sum_probs=46.3
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
..+.+.+.+.+++.|++|+++++|++|..+ +++++ |++.+|+++.+|.||+|+..
T Consensus 202 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~-v~~~~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDVVVHTGEKVVRLEGE-NGKVA-RVITDKRTLDADLVILAAGV 256 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEE-EEEESSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEcc-CCeEE-EEEeCCCEEEcCEEEECCCC
Confidence 456677888888999999999999999984 45564 77888989999999999875
No 81
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=95.67 E-value=0.02 Score=46.88 Aligned_cols=54 Identities=22% Similarity=0.252 Sum_probs=44.1
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
..+.+.+.+.+++.|++++++ +|++|..++++ + .|++.+| ++.+|.||+|+...
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~-~-~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDMGGV-F-EVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSS-E-EEECSSC-EEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE-E-EEEECCC-EEEECEEEECCCCC
Confidence 356777888888899999999 99999986444 4 4788788 79999999998763
No 82
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=95.66 E-value=0.026 Score=54.73 Aligned_cols=57 Identities=18% Similarity=0.172 Sum_probs=47.3
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
.+.+.|.+.+++.|++|+.+ +|++|..++++.+.+|++.+|++++||.||.|.....
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 46677778787889999999 9999998656666578888888899999999988753
No 83
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.63 E-value=0.025 Score=53.92 Aligned_cols=55 Identities=20% Similarity=0.309 Sum_probs=45.4
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|..++++.+ .|++.+|+++.+|.||+|+..
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSL-TLELEDGRSETVDCLIWAIGR 263 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEE-EEEECCCcEEEcCEEEECCCC
Confidence 4567778888889999999999999998544434 478888988999999999865
No 84
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=95.56 E-value=0.025 Score=54.19 Aligned_cols=55 Identities=15% Similarity=0.198 Sum_probs=45.8
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEE-EcCCeEEEcCEEEEecCh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFL-LTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~-~~~g~~~~ad~VI~a~p~ 188 (390)
..+.+.+.+.+++.|++|+++++|++|..++++.+ .|+ +.+|+ +.+|.||+|+..
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~g~-i~aD~Vv~a~G~ 266 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRR-VATTMKHGE-IVADQVMLALGR 266 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCE-EEEESSSCE-EEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEE-EEEEcCCCe-EEeCEEEEeeCc
Confidence 34567788888899999999999999998655544 578 88887 999999999876
No 85
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.56 E-value=0.026 Score=54.33 Aligned_cols=54 Identities=22% Similarity=0.293 Sum_probs=45.8
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|..++ +.+ .|++.+|+++.+|.||+|+..
T Consensus 233 ~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~-~~v-~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 233 DLRQLLNDAMVAKGISIIYEATVSQVQSTE-NCY-NVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEECS-SSE-EEEETTSCEEEESEEEECCCE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEeeC-CEE-EEEECCCcEEEcCEEEEeeCC
Confidence 456778888888999999999999999854 445 588888988999999999976
No 86
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=95.55 E-value=0.017 Score=56.82 Aligned_cols=58 Identities=19% Similarity=0.196 Sum_probs=47.1
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcC---C--eEEEcCEEEEecChhh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYVFATPVDI 190 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~---g--~~~~ad~VI~a~p~~~ 190 (390)
..+...|++.+.+.|++|+++++|++|..+ ++++++|++.+ | .+++||.||.|+.+..
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 467788888888899999999999999985 55566787754 3 4789999999987753
No 87
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=95.45 E-value=0.021 Score=53.28 Aligned_cols=54 Identities=17% Similarity=0.171 Sum_probs=43.7
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
.+...|.+.+++.|++|+++++|++|..+++ .+ .|++.+| +++||.||+|+...
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~-~v-~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDAD-GV-SVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEETT-EE-EEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcCC-eE-EEEECCC-EEEcCEEEEcCCcC
Confidence 4667888888889999999999999998544 35 3776555 79999999998764
No 88
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.45 E-value=0.032 Score=53.95 Aligned_cols=55 Identities=16% Similarity=0.222 Sum_probs=45.3
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
.+.+.+.+.+++.|++|+++++|++|..++ +.+ .|++.+|+++.+|.||+|+...
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~-~~v-~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRTG-AGV-LVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECS-SSE-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-CEE-EEEECCCcEEEcCEEEECCCCC
Confidence 456778888889999999999999999854 345 4777788889999999998763
No 89
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=95.39 E-value=0.024 Score=48.78 Aligned_cols=56 Identities=13% Similarity=0.013 Sum_probs=44.9
Q ss_pred ccchHHHHHHHHHc-CcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 132 ERLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 132 ~~l~~~l~~~l~~~-G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
..+.+.|.+.+++. |++|+ +++|++|..+ ++++++|.+.+|++++||.||.|+...
T Consensus 68 ~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 68 WAFHARAKYLLEGLRPLHLF-QATATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTTC
T ss_pred HHHHHHHHHHHHcCCCcEEE-EeEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCC
Confidence 35667788888876 88888 6799999985 455656888888889999999998874
No 90
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.34 E-value=0.024 Score=52.72 Aligned_cols=54 Identities=19% Similarity=0.241 Sum_probs=45.0
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|..++ +.+ .|++.+|+++.+|.||+|+..
T Consensus 188 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 188 AAAKAVQAGLEGLGVRFHLGPVLASLKKAG-EGL-EAHLSDGEVIPCDLVVSAVGL 241 (384)
T ss_dssp HHHHHHHHHHHTTTCEEEESCCEEEEEEET-TEE-EEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEecC-CEE-EEEECCCCEEECCEEEECcCC
Confidence 456778888888999999999999999753 334 478888988999999999875
No 91
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.33 E-value=0.04 Score=53.31 Aligned_cols=55 Identities=11% Similarity=0.134 Sum_probs=45.3
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeE-EEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNV-IDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~-~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|..++++.+ .|++.+|++ +.+|.||+++..
T Consensus 218 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~D~vi~a~G~ 273 (500)
T 1onf_A 218 SVINVLENDMKKNNINIVTFADVVEIKKVSDKNL-SIHLSDGRIYEHFDHVIYCVGR 273 (500)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCE-EEEETTSCEEEEESEEEECCCB
T ss_pred hhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceE-EEEECCCcEEEECCEEEECCCC
Confidence 4566778888899999999999999997544544 478888887 999999999875
No 92
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=95.27 E-value=0.026 Score=52.69 Aligned_cols=63 Identities=17% Similarity=0.247 Sum_probs=48.7
Q ss_pred cchHHHHHHHHHc-CcEEEcCceeeEEEECCCCCEE-EEEEcCCeEEEcCEEEEecChh-hHhhhcC
Q 016397 133 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVK-NFLLTNGNVIDGDAYVFATPVD-ILKLQLP 196 (390)
Q Consensus 133 ~l~~~l~~~l~~~-G~~I~l~~~V~~I~~~~~g~v~-~V~~~~g~~~~ad~VI~a~p~~-~~~~ll~ 196 (390)
.+.+.|.+.+++. |++|+++++|++|..++++ ++ .|++.+|++++||.||.|.... .+.+.+.
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg 173 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLNDGRVLRPRVVVGADGIASYVRRRLL 173 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETTSCEEEEEEEEECCCTTCHHHHHTS
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECCCCEEECCEEEECCCCChHHHHHhC
Confidence 5667777777776 8999999999999986554 52 3788888889999999998764 4445543
No 93
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=95.25 E-value=0.048 Score=48.97 Aligned_cols=55 Identities=11% Similarity=0.103 Sum_probs=42.7
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcC----C--eEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----G--NVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~----g--~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|..+ ++++.+|++.+ | +++.+|.||++++.
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGVTGVRLRDTQNSDNIESLDVAGLFVAIGH 245 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSEEEEEEECCTTCCCCEEEECSEEEECSCE
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcC-CCceEEEEEEeccCCCceEEEEcCEEEEEeCC
Confidence 35566677777789999999999999975 44565677754 4 57899999999865
No 94
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.24 E-value=0.039 Score=54.52 Aligned_cols=58 Identities=17% Similarity=0.095 Sum_probs=47.1
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEE---cCCe--EEEcCEEEEecChh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVD 189 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~---~~g~--~~~ad~VI~a~p~~ 189 (390)
..+.+.|.+.+++.|++|+++++|++|..++++++++|.+ .+|+ .+.|+.||+|+...
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 4678889888888999999999999999854567777775 3564 58899999998763
No 95
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.15 E-value=0.033 Score=53.08 Aligned_cols=56 Identities=18% Similarity=0.240 Sum_probs=44.6
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
..+.+.+.+.+++.|++|+++++|++|..+ ++++..|.+ +|+++.+|.||+++...
T Consensus 191 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~~v~~-~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 191 KEFTDILAKDYEAHGVNLVLGSKVAAFEEV-DDEIITKTL-DGKEIKSDIAILCIGFR 246 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEESSCEEEEEEE-TTEEEEEET-TSCEEEESEEEECCCEE
T ss_pred hhHHHHHHHHHHHCCCEEEcCCeeEEEEcC-CCeEEEEEe-CCCEEECCEEEECcCCC
Confidence 445677888888999999999999999863 455644555 78889999999998753
No 96
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=95.07 E-value=0.047 Score=53.33 Aligned_cols=58 Identities=16% Similarity=0.255 Sum_probs=47.6
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
..+.+.|.+.+++.|++++.+ +|++|..++++.+.+|++.+|++++||.||.|.....
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 356677888888889999999 8999998656665568888888899999999988753
No 97
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=95.06 E-value=0.038 Score=53.41 Aligned_cols=54 Identities=24% Similarity=0.290 Sum_probs=44.5
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|..+ ++.+ .|++.+|+++.||.||+++..
T Consensus 227 ~~~~~~~~~l~~~GV~v~~~~~V~~i~~~-~~~~-~v~l~dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 227 YLSNWTMEKVRREGVKVMPNAIVQSVGVS-SGKL-LIKLKDGRKVETDHIVAAVGL 280 (493)
T ss_dssp HHHHHHHHHHHTTTCEEECSCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCCE
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEec-CCeE-EEEECCCCEEECCEEEECCCC
Confidence 35566777788899999999999999874 4445 588889989999999999875
No 98
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=95.01 E-value=0.036 Score=52.02 Aligned_cols=63 Identities=16% Similarity=0.154 Sum_probs=49.0
Q ss_pred eecCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECC---CCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 125 FLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELND---DGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 125 ~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~---~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
+|... ...+.+.|.+.+++.|++|+++++|++|..++ ++.+ .|++.+| +++||.||+|+....
T Consensus 103 ~p~~~-~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~-~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 103 FCDEG-AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRF-VLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp EETTC-THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCE-EEEETTE-EEEESEEEECCCCSS
T ss_pred ccCCC-HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeE-EEEECCC-EEECCEEEECCCCcc
Confidence 45433 36788999999989999999999999999751 2335 4777666 799999999987654
No 99
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=94.93 E-value=0.049 Score=51.91 Aligned_cols=55 Identities=13% Similarity=0.163 Sum_probs=44.7
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
..+.+.+.+.+++.|++|+++++|++|..+ ++++ .|++.+| ++.+|.||+|+...
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~~g-~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEET-ANGI-VLETSEQ-EISCDSGIFALNLH 243 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEEC-SSCE-EEEESSC-EEEESEEEECSCCB
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEcc-CCeE-EEEECCC-EEEeCEEEECcCCC
Confidence 445677788888899999999999999974 4456 5788766 79999999998753
No 100
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=94.91 E-value=0.046 Score=53.86 Aligned_cols=57 Identities=7% Similarity=0.043 Sum_probs=45.0
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc---CCe--EEEcCEEEEecChhh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI 190 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~~~ 190 (390)
.+...+++.+.+.|++|+.+++|++|..+ ++++++|++. +|+ +++||.||+|+.+..
T Consensus 189 ~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 189 RLVIDNIKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 56677778888899999999999999985 4556667753 343 689999999998753
No 101
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=94.80 E-value=0.042 Score=52.37 Aligned_cols=56 Identities=16% Similarity=0.178 Sum_probs=45.2
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
..+.+.+.+.+++.|++|+++++|++|..++ +.+ .|++.+|+++.+|.||+|+...
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~-~~v-~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPEA-KGA-RVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEET-TEE-EEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeC-CEE-EEEECCCeEEEcCEEEECcCCC
Confidence 3456778888888999999999999999753 334 4677788889999999998763
No 102
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=94.80 E-value=0.072 Score=51.86 Aligned_cols=57 Identities=19% Similarity=0.317 Sum_probs=46.0
Q ss_pred cchHHHHHHHHH-cCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 133 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 133 ~l~~~l~~~l~~-~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
.+.+.|.+.+++ .|++|+.+ +|++|..++++.+.+|++.+|++++||.||.|.....
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 466777777877 89999999 5999998656665567887877799999999988753
No 103
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=94.53 E-value=0.059 Score=51.54 Aligned_cols=54 Identities=20% Similarity=0.326 Sum_probs=44.7
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCe-EEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~-~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|..++++ + .|++.+|+ ++.+|.||+|+..
T Consensus 208 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 208 LLSATLAENMHAQGIETHLEFAVAALERDAQG-T-TLVAQDGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEETTE-E-EEEETTCCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe-E-EEEEeCCcEEEEcCEEEECCCC
Confidence 45667778888899999999999999975444 4 47888898 8999999999875
No 104
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=94.32 E-value=0.081 Score=51.13 Aligned_cols=57 Identities=23% Similarity=0.226 Sum_probs=45.9
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc---CCe--EEEcCEEEEecChhh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI 190 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~~~ 190 (390)
..+...|++.+.+.|++|+++++|++|..++ + +++|++. +|+ +++||.||.|+.+..
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~-~-~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARREN-G-LWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEET-T-EEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC-C-EEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 3577888888888999999999999999853 3 4467773 565 789999999988753
No 105
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=94.17 E-value=0.083 Score=50.76 Aligned_cols=56 Identities=14% Similarity=0.096 Sum_probs=44.1
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCe-----EEEcCEEEEecCh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-----VIDGDAYVFATPV 188 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~-----~~~ad~VI~a~p~ 188 (390)
..+.+.+.+.+++.|++|+++++|++|..++++.+ .|++.+++ ++.+|.||+++..
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECccc
Confidence 34567778888889999999999999998655555 36666543 7899999999875
No 106
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=94.17 E-value=0.1 Score=47.73 Aligned_cols=56 Identities=27% Similarity=0.299 Sum_probs=45.4
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
.+.+.+.+.+++.|.+++++++|++|..++++.+ .|++.+|+++.+|.||+|+...
T Consensus 75 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 75 DLVESLWAQAERYNPDVVLNETVTKYTKLDDGTF-ETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCE-EEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceE-EEEECCCcEEEeeEEEEccCCC
Confidence 4666777777778899999999999998654445 4788888889999999998864
No 107
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=94.09 E-value=0.1 Score=48.87 Aligned_cols=50 Identities=24% Similarity=0.288 Sum_probs=42.0
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|. + + .|++.+|+++.+|.||++++.
T Consensus 188 ~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~~~g~~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 188 TLADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLLDDGTRIAADMVVVGIGV 237 (408)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEETTSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEECCCCEEEcCEEEECcCC
Confidence 355677788888999999999999998 3 3 367788988999999999875
No 108
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=94.08 E-value=0.098 Score=48.41 Aligned_cols=58 Identities=24% Similarity=0.351 Sum_probs=46.2
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh-hHhhhc
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD-ILKLQL 195 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~-~~~~ll 195 (390)
.+.+.|.+.+++.|++|+++++|++|.. ++ .|++.+|++++||.||.|.... .+.+.+
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s~vr~~l 166 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGSKVRDSI 166 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccHHHHHHh
Confidence 4567788888888999999999999987 44 2778888889999999998764 344443
No 109
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=94.08 E-value=0.11 Score=46.86 Aligned_cols=53 Identities=8% Similarity=0.025 Sum_probs=41.3
Q ss_pred hHHHHHHHHHc-CcEEEcCceeeEEEECCCCCEEEEEEcC-----CeEEEcCEEEEecCh
Q 016397 135 CLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTN-----GNVIDGDAYVFATPV 188 (390)
Q Consensus 135 ~~~l~~~l~~~-G~~I~l~~~V~~I~~~~~g~v~~V~~~~-----g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+. |++|+++++|++|..+ ++.+.+|++.+ ++++.+|.||++++.
T Consensus 211 ~~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 211 STIMQKRAEKNEKIEILYNTVALEAKGD-GKLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp CHHHHHHHHHCTTEEEECSEEEEEEEES-SSSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred CHHHHHHHHhcCCeEEeecceeEEEEcc-cCcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 46667777665 9999999999999985 44465677765 357899999999865
No 110
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=94.02 E-value=0.22 Score=45.38 Aligned_cols=191 Identities=12% Similarity=0.016 Sum_probs=96.4
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhHhhhcCcchhccHHHHHhhcC
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKL 211 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~~l 211 (390)
..+...|.+.+++.|++|+. ++|++|..+ + .++||.||+|+....- .+++. +
T Consensus 142 ~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~--~-----------~~~a~~VV~A~G~~s~-~l~~~-------------~ 193 (351)
T 3g3e_A 142 KNYLQWLTERLTERGVKFFQ-RKVESFEEV--A-----------REGADVIVNCTGVWAG-ALQRD-------------P 193 (351)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCCCHHHH--H-----------HTTCSEEEECCGGGGG-GTSCC-------------T
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEeCCHHHh--h-----------cCCCCEEEECCCcChH-hhcCC-------------C
Confidence 36778888888889999988 898887642 1 1569999999987653 34432 1
Q ss_pred CCccEEEEEEEeCccccccCCceeecCCCcchhhhhcccccccccCCCCcE-EEEEecCCCCCCCCCHHHHHHHHHHHHH
Q 016397 212 VGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSM-LELVFAPAEEWISCSDSEIIDATMKELA 290 (390)
Q Consensus 212 ~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~a~~g~~l-l~~~~~~~~~~~~~~~ee~~~~~~~~l~ 290 (390)
+-.++-.-++.++.+. ....++...+.... + .. ....|....+ +.-+.. ...+....+++..+.+++.+.
T Consensus 194 ~l~p~rg~~~~~~~~~---~~~~~~~~~~~~~~--~-~~--~y~~p~~~~~~iGg~~~-~~~~~~~~~~~~~~~l~~~~~ 264 (351)
T 3g3e_A 194 LLQPGRGQIMKVDAPW---MKHFILTHDPERGI--Y-NS--PYIIPGTQTVTLGGIFQ-LGNWSELNNIQDHNTIWEGCC 264 (351)
T ss_dssp TCEEEEEEEEEEECTT---CCSEEEECCTTTCT--T-CS--CEEEECSSCEEEECCCE-ETCCCCSCCHHHHHHHHHHHH
T ss_pred ceeecCCcEEEEeCCC---cceEEEeccccCCC--C-ce--eEEEeCCCcEEEeeeee-cCCCCCCCCHHHHHHHHHHHH
Confidence 1122222333343321 12222211110000 0 00 0001111122 221111 112222334566788999999
Q ss_pred HhCCCCccccccCceEEEEEEEEeCCceeccCCCCCCC-CCCC-CCC-CCCeEEecccccCCCCCchhHHHHHHHHHHHH
Q 016397 291 KLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPC-RPLQ-RSP-VEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 367 (390)
Q Consensus 291 ~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~-~~~~-~~~-~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~ 367 (390)
+++|.+.+ ..+...+. +....+|+ ... .+.+ ..+ .+|+|++.-+.+ .|+.-|-..|+.+|+.
T Consensus 265 ~~~P~l~~-----~~i~~~w~-----G~r~~t~D-~p~~~~~ig~~~~~~~~~~~~G~~g----~G~~~ap~~g~~la~l 329 (351)
T 3g3e_A 265 RLEPTLKN-----ARIIGERT-----GFRPVRPQ-IRLEREQLRTGPSNTEVIHNYGHGG----YGLTIHWGCALEAAKL 329 (351)
T ss_dssp HHCGGGGG-----CEEEEEEE-----EEEEECSS-CEEEEEEECCSSSCEEEEEEECCTT----CHHHHHHHHHHHHHHH
T ss_pred HhCCCccC-----CcEeeeeE-----eeCCCCCC-ccceeeeccCCCCCCeEEEEeCCCc----chHhhhHHHHHHHHHH
Confidence 99997642 23332221 11112222 110 0000 112 468888763332 4788888899999999
Q ss_pred HHHHhhh
Q 016397 368 IVQDYVL 374 (390)
Q Consensus 368 il~~~~~ 374 (390)
|...+..
T Consensus 330 i~~~~~~ 336 (351)
T 3g3e_A 330 FGRILEE 336 (351)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9887653
No 111
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=93.96 E-value=0.099 Score=51.69 Aligned_cols=56 Identities=14% Similarity=0.016 Sum_probs=46.0
Q ss_pred cchHHHHHHHHH-cCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 133 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 133 ~l~~~l~~~l~~-~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
.+.+.|.+.+++ .|++| ++++|+.|..+ ++++++|.+.+|.++.||.||+|+....
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e-~g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIVK-NNQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEES-SSBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEec-CCEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 467778888877 58999 68899999985 5667789998998899999999998643
No 112
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.87 E-value=0.11 Score=50.82 Aligned_cols=56 Identities=20% Similarity=0.386 Sum_probs=44.5
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEEC------------------CCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELN------------------DDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~------------------~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
..+.+.+.+.+++.|++|++++.|++|..+ +++.+ .+.+.+|+++.+|.||+|+..
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~g~~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHL-SLTLSNGELLETDLLIMAIGV 265 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEE-EEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcE-EEEEcCCCEEEcCEEEECcCC
Confidence 345566777888899999999999999873 24445 367788889999999999864
No 113
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=93.85 E-value=0.11 Score=52.10 Aligned_cols=57 Identities=12% Similarity=0.164 Sum_probs=46.3
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEE---cCCe--EEEcCEEEEecChh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVD 189 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~---~~g~--~~~ad~VI~a~p~~ 189 (390)
..+...|.+.+.+.|++|+.+++|++|..+ +|++++|.+ .+|+ .+.||.||+|+...
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQ-DGKCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEec-CCEEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 468888988888889999999999999984 566767765 3565 58999999998764
No 114
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=93.74 E-value=0.032 Score=52.33 Aligned_cols=55 Identities=15% Similarity=0.194 Sum_probs=40.8
Q ss_pred cchHHHHHHHHHcCcEEEcCceee---------EEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQ---------KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~---------~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
.+.+.|.+.+++.|++|+++++|+ +|..+ ++.+ +|++.+| +++||.||+|+....
T Consensus 173 ~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 173 SLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEECCc-EEECCEEEECCCccH
Confidence 477888888888899999999999 88875 3445 5777666 799999999998753
No 115
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=93.73 E-value=0.14 Score=49.02 Aligned_cols=57 Identities=18% Similarity=0.263 Sum_probs=43.5
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEE-----cCCeEEEcCEEEEecChh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-----TNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~-----~~g~~~~ad~VI~a~p~~ 189 (390)
..+.+.+.+.+++.|++|+++++|++|..++++.+ .|++ .+++++.+|.||+++...
T Consensus 220 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 220 MEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKI-DVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCE-EEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceE-EEEEEecCCCCceEEEcCEEEECcCCC
Confidence 34556777888889999999999999998544424 3553 356789999999998753
No 116
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=93.69 E-value=0.1 Score=50.46 Aligned_cols=61 Identities=13% Similarity=0.038 Sum_probs=43.6
Q ss_pred chHHHHHHHHHcC-cEEEcCceeeEEEECCCC-CEEEEEEc--CC-----eEEEcCEEEEecChhhHhhh
Q 016397 134 LCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYVFATPVDILKLQ 194 (390)
Q Consensus 134 l~~~l~~~l~~~G-~~I~l~~~V~~I~~~~~g-~v~~V~~~--~g-----~~~~ad~VI~a~p~~~~~~l 194 (390)
....+.+.+.+.| .+|+++++|++|..++++ ++++|++. +| .++.|+.||+|+..-...+|
T Consensus 223 ~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~l 292 (504)
T 1n4w_A 223 LDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTEL 292 (504)
T ss_dssp TTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHH
Confidence 3444444455565 899999999999996534 67788875 56 36789999999877544444
No 117
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=93.63 E-value=0.12 Score=45.81 Aligned_cols=56 Identities=11% Similarity=0.110 Sum_probs=42.4
Q ss_pred cchHHHHHHHHH-cCcEEEcCceeeEEEECCCCCEEEEEEc---------CC-----eEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLT---------NG-----NVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~-~G~~I~l~~~V~~I~~~~~g~v~~V~~~---------~g-----~~~~ad~VI~a~p~~ 189 (390)
.+...|.+.+.+ .|++|+++++|++|..+ ++++++|.+. +| .+++||.||+|+...
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~ 190 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHD 190 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSS
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEec-CCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCc
Confidence 466677777765 69999999999999985 4556566653 32 578999999998753
No 118
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=93.59 E-value=0.067 Score=52.25 Aligned_cols=59 Identities=14% Similarity=0.023 Sum_probs=43.4
Q ss_pred ccchHHHHHHHHH-cCcEEEcCceeeEEEECCCC------CEEEEEEc---CCe--EEEcCEEEEecChhh
Q 016397 132 ERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDG------TVKNFLLT---NGN--VIDGDAYVFATPVDI 190 (390)
Q Consensus 132 ~~l~~~l~~~l~~-~G~~I~l~~~V~~I~~~~~g------~v~~V~~~---~g~--~~~ad~VI~a~p~~~ 190 (390)
..+.+.|.+.+++ .|++|+++++|++|..++++ ++++|.+. +|+ ++.|+.||+|+....
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 3577777777777 69999999999999984334 67777765 565 689999999987643
No 119
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=93.57 E-value=0.094 Score=51.76 Aligned_cols=53 Identities=25% Similarity=0.335 Sum_probs=43.7
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
..+.+.+.+.+++.|++|+++++|++|..+ ++ +|++.+|+++.+|.||+|+..
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~---~v~~~~g~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEEN-GA---VVRLKSGSVIQTDMLILAIGV 280 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGG-GT---EEEETTSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecC-CC---EEEECCCCEEEcCEEEEccCC
Confidence 345677888888899999999999999864 23 367788989999999999874
No 120
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=93.54 E-value=0.15 Score=48.80 Aligned_cols=55 Identities=16% Similarity=0.203 Sum_probs=43.5
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCC---eEEEcCEEEEecCh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYVFATPV 188 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g---~~~~ad~VI~a~p~ 188 (390)
..+.+.+.+.+++.|++|+++++|++|..+++ .+ .|++.++ +++.+|.||+++..
T Consensus 221 ~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~-~~-~v~~~~~~g~~~~~~D~vi~a~G~ 278 (476)
T 3lad_A 221 EQVAKEAQKILTKQGLKILLGARVTGTEVKNK-QV-TVKFVDAEGEKSQAFDKLIVAVGR 278 (476)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCEEEEEEECSS-CE-EEEEESSSEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEcCC-EE-EEEEEeCCCcEEEECCEEEEeeCC
Confidence 34567778888889999999999999998543 35 3666654 57899999999875
No 121
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.51 E-value=0.18 Score=45.26 Aligned_cols=53 Identities=17% Similarity=0.177 Sum_probs=41.0
Q ss_pred hHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc---CCe--EEEcCEEEEecCh
Q 016397 135 CLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPV 188 (390)
Q Consensus 135 ~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~ 188 (390)
...+.+.+.+.|++|+++++|++|..+ ++++.+|++. +|+ ++.+|.||+++..
T Consensus 193 ~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 193 ENAYVQEIKKRNIPYIMNAQVTEIVGD-GKKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp CHHHHHHHHHTTCCEECSEEEEEEEES-SSSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred CHHHHHHHhcCCcEEEcCCeEEEEecC-CceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 356777778889999999999999975 4445556665 564 6889999998754
No 122
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=93.48 E-value=0.1 Score=51.83 Aligned_cols=58 Identities=10% Similarity=0.067 Sum_probs=46.8
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEE---cCCe--EEEcCEEEEecChhh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 190 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~---~~g~--~~~ad~VI~a~p~~~ 190 (390)
..+...|.+.+.+.|++|+.+++|++|..+ ++++++|.+ .+|+ .+.|+.||+|+....
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLME-NGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 367888888888889999999999999985 566777766 3564 688999999987643
No 123
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=93.48 E-value=0.16 Score=48.57 Aligned_cols=54 Identities=15% Similarity=0.177 Sum_probs=41.7
Q ss_pred cchHHHHHHH-HHcCcEEEcCceeeEEEECCCCCEEEEEEc--CC--eEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHI-QSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NG--NVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l-~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~--~g--~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+ ++.|++|+++++|++|..++++ + .|++. +| +++.+|.||+|+..
T Consensus 216 ~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~~~g~~~~i~~D~vv~a~G~ 274 (468)
T 2qae_A 216 DVTNALVGALAKNEKMKFMTSTKVVGGTNNGDS-V-SLEVEGKNGKRETVTCEALLVSVGR 274 (468)
T ss_dssp HHHHHHHHHHHHHTCCEEECSCEEEEEEECSSS-E-EEEEECC---EEEEEESEEEECSCE
T ss_pred HHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCe-E-EEEEEcCCCceEEEECCEEEECCCc
Confidence 3567778888 8899999999999999985433 4 36665 66 57899999999875
No 124
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=93.43 E-value=0.12 Score=51.21 Aligned_cols=56 Identities=9% Similarity=0.081 Sum_probs=45.6
Q ss_pred cchHHHHHHHHH-cCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 133 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 133 ~l~~~l~~~l~~-~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
.+.+.|.+.+++ .|++| ++++|+.|..+ ++++++|.+.+|.++.||.||+|+....
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e-~g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVE-NDRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEES-SSBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEec-CCEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 466777888877 68999 67899999985 5567788888898899999999998754
No 125
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=93.42 E-value=0.11 Score=46.77 Aligned_cols=55 Identities=13% Similarity=0.236 Sum_probs=44.1
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
..+.+.+.+.+++.|.+++++++|++|..++++.+ .|++.+|+ +.+|.||+|+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 67 QELINNLKEQMAKFDQTICLEQAVESVEKQADGVF-KLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCE-EEEESSEE-EEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcE-EEEECCCE-EEeCEEEECCCC
Confidence 35667777777778999999999999998655345 47887776 999999999887
No 126
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=93.40 E-value=3.3 Score=41.33 Aligned_cols=36 Identities=14% Similarity=0.128 Sum_probs=27.9
Q ss_pred CCeEEecccccCCCC---CchhHHHHHHHHHHHHHHHHh
Q 016397 337 EGFYLAGDYTKQKYL---ASMEGAVLSGKLCAQAIVQDY 372 (390)
Q Consensus 337 ~~l~~aGd~~~~~~~---~~~~gA~~SG~~aA~~il~~~ 372 (390)
++++++||..+.-.| .|++-++..+...|.+|...+
T Consensus 351 gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl 389 (665)
T 1pn0_A 351 ERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVL 389 (665)
T ss_dssp TTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHH
Confidence 689999998776544 478889998888877776543
No 127
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=93.37 E-value=0.17 Score=49.94 Aligned_cols=56 Identities=16% Similarity=0.191 Sum_probs=44.3
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc-CC--eEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NG--NVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~-~g--~~~~ad~VI~a~p~~ 189 (390)
.+.+.|.+.+++.|++|+.+++|++|..++ +.+.+|++. +| .+++||.||.|....
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~-g~~~~V~~~~~G~~~~i~AdlVV~AdG~~ 187 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLSD-PDRVVLTVRRGGESVTVESDFVIDAGGSG 187 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECCS-TTCEEEEEEETTEEEEEEESEEEECCGGG
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEEEEEEecCCceEEEEcCEEEECCCCc
Confidence 456777778888899999999999999853 333367776 67 578999999998764
No 128
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=93.36 E-value=0.15 Score=48.83 Aligned_cols=56 Identities=14% Similarity=0.281 Sum_probs=42.0
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc-----CCeEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-----NGNVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~-----~g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|..++++....|++. +|+++.+|.||+|+..
T Consensus 225 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 285 (478)
T 1v59_A 225 EVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGR 285 (478)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCC
Confidence 4567778888889999999999999987212222246665 3467899999999875
No 129
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=93.33 E-value=0.1 Score=48.85 Aligned_cols=51 Identities=18% Similarity=0.245 Sum_probs=42.4
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
..+.+.+.+.+++.|++++++++|++|+. ++ |++.+|+++.+|.||++++.
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~~----v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--HE----IVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--SE----EEETTSCEEECSEEEEECCE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--Ce----EEECCCCEEeeeEEEECCCC
Confidence 35667788888889999999999999974 23 56788989999999999875
No 130
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=93.30 E-value=0.12 Score=49.71 Aligned_cols=53 Identities=17% Similarity=0.291 Sum_probs=42.1
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|.. ++++..|.+ +|+++.+|.||+++..
T Consensus 237 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 237 DLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIIT-DKNEYDVDMVILAVGF 289 (490)
T ss_dssp HHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-SSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-CCcEEECCEEEECCCC
Confidence 4556777888889999999999999986 343434565 6778999999999875
No 131
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=93.29 E-value=0.19 Score=48.38 Aligned_cols=63 Identities=21% Similarity=0.319 Sum_probs=46.5
Q ss_pred CceEEeecCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 120 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 120 ~~~~~~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
+....+..||. . .+.+.+++.|++|++++.|++|..+ ++ +.+|++.+|+++.+|.||+++...
T Consensus 250 ~~~vvViGgG~-~----gle~~l~~~GV~v~~~~~v~~i~~~-~~-v~~v~~~~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 250 GRKVAVTGSKA-D----EVIQELERWGIDYVHIPNVKRVEGN-EK-VERVIDMNNHEYKVDALIFADGRR 312 (493)
T ss_dssp CSEEEEESTTH-H----HHHHHHHHHTCEEEECSSEEEEECS-SS-CCEEEETTCCEEECSEEEECCCEE
T ss_pred CCEEEEECCCH-H----HHHHHHHhCCcEEEeCCeeEEEecC-Cc-eEEEEeCCCeEEEeCEEEECCCcC
Confidence 34555566664 2 2336677889999999999999864 33 445778888899999999998763
No 132
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=93.20 E-value=0.15 Score=49.71 Aligned_cols=57 Identities=12% Similarity=0.100 Sum_probs=45.0
Q ss_pred cchHHHHHHHHHcCc--EEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~--~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
.+.+.+.+.+++.|. +|+++++|+++..++++....|++.+|++++||.||+|+...
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLL 146 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCccc
Confidence 466667777777787 899999999999865533335888899889999999999853
No 133
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=93.11 E-value=0.16 Score=49.60 Aligned_cols=56 Identities=14% Similarity=0.218 Sum_probs=44.1
Q ss_pred cchHHHHHHHHHcCc--EEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~--~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|. +|+++++|+++..++++....|++.+|++++||.||+|+..
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGP 157 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 456666666677776 89999999999986543333588889988999999999985
No 134
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=93.05 E-value=0.15 Score=48.61 Aligned_cols=54 Identities=15% Similarity=0.139 Sum_probs=42.6
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc-C--Ce--EEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-N--GN--VIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~-~--g~--~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|..++ +.+ .|++. + |+ ++.+|.||+|+..
T Consensus 211 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-~~~-~v~~~~~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 211 ETAALLRRALEKEGIRVRTKTKAVGYEKKK-DGL-HVRLEPAEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEE-EEEEEETTCCSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHhcCCEEEcCCEEEEEEEeC-CEE-EEEEeecCCCceeEEEcCEEEECCCc
Confidence 455677788888999999999999999753 334 36665 6 76 7999999999865
No 135
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=93.03 E-value=0.26 Score=44.46 Aligned_cols=53 Identities=11% Similarity=0.043 Sum_probs=40.7
Q ss_pred chHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc---CC--eEEEcCEEEEecCh
Q 016397 134 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NG--NVIDGDAYVFATPV 188 (390)
Q Consensus 134 l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~---~g--~~~~ad~VI~a~p~ 188 (390)
+.+.|.+.+++.|+++++++.|++|..+ +++.+|++. +| +++.+|.||+++..
T Consensus 193 ~~~~l~~~l~~~gv~v~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2zbw_A 193 SVKELMKAHEEGRLEVLTPYELRRVEGD--ERVRWAVVFHNQTQEELALEVDAVLILAGY 250 (335)
T ss_dssp HHHHHHHHHHTTSSEEETTEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHhccccCCeEEecCCcceeEccC--CCeeEEEEEECCCCceEEEecCEEEEeecC
Confidence 4456666677779999999999999973 345456665 67 57899999999865
No 136
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=92.95 E-value=0.14 Score=46.85 Aligned_cols=55 Identities=16% Similarity=0.225 Sum_probs=42.5
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc--CC--eEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NG--NVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~--~g--~~~~ad~VI~a~p~ 188 (390)
.+.+.|.+.+++.|++|+++++|++|..+ ++++.+|++. +| +++.+|.||+++..
T Consensus 203 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~ 261 (360)
T 3ab1_A 203 KTAHEVERARANGTIDVYLETEVASIEES-NGVLTRVHLRSSDGSKWTVEADRLLILIGF 261 (360)
T ss_dssp HHHHSSHHHHHHTSEEEESSEEEEEEEEE-TTEEEEEEEEETTCCEEEEECSEEEECCCB
T ss_pred HHHHHHHHHhhcCceEEEcCcCHHHhccC-CCceEEEEEEecCCCeEEEeCCEEEECCCC
Confidence 34566677777788999999999999974 4555456664 77 57899999999875
No 137
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=92.95 E-value=0.094 Score=48.83 Aligned_cols=49 Identities=14% Similarity=0.150 Sum_probs=39.5
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 136 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 136 ~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
....+.+++.|.+++++++|++|+.+ ++ . |++.+|+++.+|++|+|+..
T Consensus 66 ~~~~~~~~~~~i~~~~~~~V~~id~~-~~-~--v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 66 IKKNDWYEKNNIKVITSEFATSIDPN-NK-L--VTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp SSCHHHHHHTTCEEECSCCEEEEETT-TT-E--EEETTSCEEECSEEEECCCE
T ss_pred CCCHHHHHHCCCEEEeCCEEEEEECC-CC-E--EEECCCCEEECCEEEEecCC
Confidence 33455566789999999999999974 33 2 77888989999999999975
No 138
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=92.94 E-value=0.22 Score=47.54 Aligned_cols=54 Identities=17% Similarity=0.262 Sum_probs=42.2
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc-CC--eEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NG--NVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~-~g--~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|..+++ .+ .|++. +| +++.+|.||+++..
T Consensus 213 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~-~v~~~~~g~~~~~~~D~vv~a~G~ 269 (464)
T 2a8x_A 213 DVSKEIEKQFKKLGVTILTATKVESIADGGS-QV-TVTVTKDGVAQELKAEKVLQAIGF 269 (464)
T ss_dssp HHHHHHHHHHHHHTCEEECSCEEEEEEECSS-CE-EEEEESSSCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEcCC-eE-EEEEEcCCceEEEEcCEEEECCCC
Confidence 4456677888889999999999999997533 34 36654 56 57899999999875
No 139
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=92.77 E-value=0.19 Score=46.07 Aligned_cols=55 Identities=15% Similarity=-0.031 Sum_probs=42.4
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
.+.+.+.+.+++.|.+|+++++|++|..++++ + .|.+.+| ++.+|+||+|+....
T Consensus 89 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 89 TYAEYLQVVANHYELNIFENTVVTNISADDAY-Y-TIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-E-EEEESSC-CEEEEEEEECCCSTT
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe-E-EEEeCCC-EEEeCEEEECCCCCC
Confidence 35556666667789999999999999985444 4 3777666 589999999998753
No 140
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.74 E-value=0.18 Score=44.95 Aligned_cols=49 Identities=8% Similarity=-0.004 Sum_probs=37.6
Q ss_pred HHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc--CCe--EEEcCEEEEecCh
Q 016397 139 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPV 188 (390)
Q Consensus 139 ~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~--~g~--~~~ad~VI~a~p~ 188 (390)
.+.+++.|++|+++++|++|..+ ++++.+|++. +|+ ++.+|.||+++..
T Consensus 190 ~~~~~~~gv~~~~~~~v~~i~~~-~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 190 EKVKKNEKIELITSASVDEVYGD-KMGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp HHHHHCTTEEEECSCEEEEEEEE-TTEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred HHHHhcCCeEEEeCcEEEEEEcC-CCcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 33345779999999999999975 4456566665 775 7889999999864
No 141
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=92.73 E-value=0.17 Score=48.87 Aligned_cols=62 Identities=16% Similarity=0.101 Sum_probs=43.3
Q ss_pred cchHHHHHHHHHcC-cEEEcCceeeEEEECCCC-CEEEEEEc--CC-----eEEEcCEEEEecChhhHhhh
Q 016397 133 RLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYVFATPVDILKLQ 194 (390)
Q Consensus 133 ~l~~~l~~~l~~~G-~~I~l~~~V~~I~~~~~g-~v~~V~~~--~g-----~~~~ad~VI~a~p~~~~~~l 194 (390)
.....+.....+.| .+|+++++|++|..++++ ++++|++. +| .++.|+.||+++..-...+|
T Consensus 227 s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~l 297 (507)
T 1coy_A 227 SLDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKL 297 (507)
T ss_dssp CTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHH
T ss_pred ChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHH
Confidence 33444444444555 899999999999996545 57788875 45 26789999999877544444
No 142
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=92.70 E-value=0.24 Score=47.38 Aligned_cols=56 Identities=20% Similarity=0.202 Sum_probs=43.6
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCC-CEEEEEEcC---C----eEEEcCEEEEecCh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDG-TVKNFLLTN---G----NVIDGDAYVFATPV 188 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g-~v~~V~~~~---g----~~~~ad~VI~a~p~ 188 (390)
..+.+.+.+.+++.|++|+++++|++|..++++ .+ .|++.+ | +++.+|.||+++..
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~-~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEV-SMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEE-EEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEE-EEEEccCCCCcccceEEEcCEEEEeecc
Confidence 345667778888899999999999999986555 33 466654 2 57899999999875
No 143
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=92.69 E-value=0.19 Score=46.75 Aligned_cols=52 Identities=8% Similarity=0.040 Sum_probs=40.3
Q ss_pred chHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 134 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 134 l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
+.+.|.+.+ .|++|+++++|++|..++++ + .|++.+|++++||.||.|....
T Consensus 101 l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~-v-~v~~~~g~~~~ad~vV~AdG~~ 152 (397)
T 2vou_A 101 IYGGLYELF--GPERYHTSKCLVGLSQDSET-V-QMRFSDGTKAEANWVIGADGGA 152 (397)
T ss_dssp HHHHHHHHH--CSTTEETTCCEEEEEECSSC-E-EEEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHHhC--CCcEEEcCCEEEEEEecCCE-E-EEEECCCCEEECCEEEECCCcc
Confidence 334444433 48999999999999986554 6 3888889889999999998764
No 144
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=92.66 E-value=0.094 Score=50.39 Aligned_cols=54 Identities=17% Similarity=0.127 Sum_probs=42.9
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcC----CeEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----GNVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~----g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|..++++ + .|++.+ |+++.+|.||+++..
T Consensus 227 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~-~-~v~~~~~~~~g~~~~~D~vv~a~G~ 284 (482)
T 1ojt_A 227 DLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDG-V-YVTFEGANAPKEPQRYDAVLVAAGR 284 (482)
T ss_dssp HHHHHHHHHHGGGEEEEECSCEEEEEEEETTE-E-EEEEESSSCCSSCEEESCEEECCCE
T ss_pred HHHHHHHHHHHhcCCEEEECCEEEEEEEcCCe-E-EEEEeccCCCceEEEcCEEEECcCC
Confidence 45567777888899999999999999975333 3 477766 777899999999875
No 145
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=92.54 E-value=0.17 Score=45.68 Aligned_cols=55 Identities=22% Similarity=0.325 Sum_probs=43.5
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
.+.+.+.+.+++.|.+++++++|++|..+++ .+ .|.+.+|+++.+|.||+|+...
T Consensus 66 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-~~-~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 66 DLVKGLVEQVAPFNPVYSLGERAETLEREGD-LF-KVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHHHHGGGCCEEEESCCEEEEEEETT-EE-EEEETTSCEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEECCC-EE-EEEECCCCEEEeCEEEECCCCC
Confidence 4566676777677899999999999998543 34 4777788789999999999863
No 146
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=92.30 E-value=0.23 Score=47.41 Aligned_cols=54 Identities=17% Similarity=0.178 Sum_probs=42.9
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
.+.+.+.+.+++.|++|+++++|++|..+ ++.+ .|.+. +.++.+|.||+|+...
T Consensus 217 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~~-~v~~~-~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 217 AIGEAVTAAFRAEGIEVLEHTQASQVAHM-DGEF-VLTTT-HGELRADKLLVATGRT 270 (467)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEE-TTEE-EEEET-TEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEe-CCEE-EEEEC-CcEEEcCEEEECCCCC
Confidence 46677888888899999999999999874 3433 46665 5679999999998763
No 147
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=92.26 E-value=0.13 Score=47.84 Aligned_cols=44 Identities=18% Similarity=0.310 Sum_probs=37.6
Q ss_pred cCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 145 LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 145 ~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
.+.+|+++++|++++..+++.+ .|++.||++++||.||-|-...
T Consensus 122 ~~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVgADG~~ 165 (412)
T 4hb9_A 122 LANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVGADGSN 165 (412)
T ss_dssp CTTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEECCCTT
T ss_pred ccceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEECCCCC
Confidence 4678999999999998777766 4889999999999999987764
No 148
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=92.26 E-value=0.17 Score=50.03 Aligned_cols=57 Identities=19% Similarity=0.172 Sum_probs=45.6
Q ss_pred ccchHHHHHHHHHcC-cEEEcCceeeEEEECCCCCEEEEEE---cCCe--EEEcCEEEEecChh
Q 016397 132 ERLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVD 189 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G-~~I~l~~~V~~I~~~~~g~v~~V~~---~~g~--~~~ad~VI~a~p~~ 189 (390)
..+...|.+.+.+.| ++|+++++|++|..+ ++++++|.+ .+|+ .+.|+.||+|+...
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD-DGHVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 367788888887788 999999999999985 566666654 4676 68999999998764
No 149
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=92.15 E-value=0.32 Score=46.66 Aligned_cols=56 Identities=14% Similarity=0.165 Sum_probs=43.0
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcC---Ce--EEEcCEEEEecCh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGDAYVFATPV 188 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~---g~--~~~ad~VI~a~p~ 188 (390)
..+.+.+.+.+++.|++|++++.|++|...+++.+ .|++.+ |+ ++.+|.||+++..
T Consensus 225 ~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~ 285 (488)
T 3dgz_A 225 QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDTVLWAIGR 285 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCEEEEcccC
Confidence 34667778888889999999999999987545544 355544 54 4789999999875
No 150
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.08 E-value=0.19 Score=47.76 Aligned_cols=55 Identities=18% Similarity=0.196 Sum_probs=42.2
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc---CCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~~~~ad~VI~a~p~~ 189 (390)
.+.+.+.+.+++.|++|+++++|++|..++ +.+ .|++. +++++.+|.||+++...
T Consensus 212 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 212 QMAAIIKKRLKKKGVEVVTNALAKGAEERE-DGV-TVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp HHHHHHHHHHHHTTCEEEESEEEEEEEEET-TEE-EEEEEETTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-CeE-EEEEEeCCceeEEEcCEEEECcCCC
Confidence 455677788888999999999999999753 334 35554 34678999999998753
No 151
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=92.05 E-value=0.21 Score=47.29 Aligned_cols=53 Identities=21% Similarity=0.275 Sum_probs=41.7
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|..+ +++..|.+ +|+++.+|.||+|+..
T Consensus 192 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~-~~~~i~~d~vi~a~G~ 244 (447)
T 1nhp_A 192 EFTDVLTEEMEANNITIATGETVERYEGD--GRVQKVVT-DKNAYDADLVVVAVGV 244 (447)
T ss_dssp HHHHHHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEE-SSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEE-CCCEEECCEEEECcCC
Confidence 45567778888899999999999999864 33434555 5668999999999875
No 152
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=91.88 E-value=0.43 Score=45.67 Aligned_cols=55 Identities=15% Similarity=0.083 Sum_probs=43.2
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
..+.+.+.+.+++.|++|+++++|++|..+ +++..|.+. +.++.+|.||+++...
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~~-~~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKGN--ERVEAVETD-KGTYKADLVLVSVGVK 281 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES--SBEEEEEET-TEEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEEC-CCEEEcCEEEECcCCC
Confidence 345677888888899999999999999874 445456664 5579999999998753
No 153
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=91.86 E-value=0.25 Score=47.54 Aligned_cols=55 Identities=16% Similarity=0.296 Sum_probs=42.6
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcC---C--eEEEcCEEEEecCh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYVFATPV 188 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~---g--~~~~ad~VI~a~p~ 188 (390)
..+.+.+.+.+++.|++|+++++|++|..++++ + .|++.+ | +++.+|.||+++..
T Consensus 239 ~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~-~-~v~~~~~~~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 239 GEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDG-A-KVTFEPVKGGEATTLDAEVVLIATGR 298 (491)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTE-E-EEEEEETTSCCCEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCE-E-EEEEEecCCCceEEEEcCEEEEeeCC
Confidence 345677788888899999999999999985433 4 355542 5 57899999999875
No 154
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=91.84 E-value=0.26 Score=43.85 Aligned_cols=56 Identities=16% Similarity=0.185 Sum_probs=43.5
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCC--CCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDD--GTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~--g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
.+.+.+.+.+++.|.+++++++|+.|..+.+ +.+ .|++.+|+++.+|.||+|+...
T Consensus 57 ~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~-~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 57 KLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLH-QIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCE-EEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceE-EEEECCCCEEEeCEEEECcCCC
Confidence 4566677777778999999999999986422 234 4788888889999999998863
No 155
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=91.76 E-value=0.41 Score=42.06 Aligned_cols=60 Identities=13% Similarity=0.169 Sum_probs=47.5
Q ss_pred eEEeecCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 122 KMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 122 ~~~~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
...++..+. ..+.+.+.+.+++.|++|+. ++|++|..+ + .|++.+|+++.+|.||++++.
T Consensus 165 ~v~~v~~~~-~~~~~~~~~~l~~~gv~i~~-~~v~~i~~~--~---~v~~~~g~~~~~D~vi~a~G~ 224 (297)
T 3fbs_A 165 ETTFFTNGI-VEPDADQHALLAARGVRVET-TRIREIAGH--A---DVVLADGRSIALAGLFTQPKL 224 (297)
T ss_dssp EEEEECTTT-CCCCHHHHHHHHHTTCEEEC-SCEEEEETT--E---EEEETTSCEEEESEEEECCEE
T ss_pred cEEEEECCC-CCCCHHHHHHHHHCCcEEEc-ceeeeeecC--C---eEEeCCCCEEEEEEEEEccCc
Confidence 566665553 46888889999999999995 999999853 2 377889989999999999754
No 156
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.75 E-value=0.24 Score=47.23 Aligned_cols=55 Identities=16% Similarity=0.384 Sum_probs=42.6
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc---CC--eEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NG--NVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~---~g--~~~~ad~VI~a~p~~ 189 (390)
.+.+.+.+.+++.|++|+++++|++|..++++ + .|++. +| +++.+|.||+++...
T Consensus 219 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 219 EIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDG-V-KLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp HHHHHHHHHHHHSSCCEECSEEEEEEECSSSS-E-EEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCe-E-EEEEEecCCCcceEEECCEEEECCCCC
Confidence 45677788888899999999999999975333 4 35554 45 678999999998753
No 157
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=91.68 E-value=0.28 Score=47.86 Aligned_cols=55 Identities=9% Similarity=0.041 Sum_probs=45.9
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
..+.+.+.+.|++.|.++++++.|+++...+ +.+ .|.+.+++++.+|.|++|+.-
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~-~~~-~v~~~~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKMD-DKI-LVEFSDKTSELYDTVLYAIGR 317 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEET-TEE-EEEETTSCEEEESEEEECSCE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEecC-CeE-EEEEcCCCeEEEEEEEEcccc
Confidence 4566778888999999999999999999854 445 478888888999999999864
No 158
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=91.65 E-value=0.25 Score=47.73 Aligned_cols=56 Identities=20% Similarity=0.231 Sum_probs=41.6
Q ss_pred CccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCC----eEEEcCEEEEecCh
Q 016397 131 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG----NVIDGDAYVFATPV 188 (390)
Q Consensus 131 ~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g----~~~~ad~VI~a~p~ 188 (390)
...+.+.+.+.|++.|++|++|++|++|+. ++.+..+...|| +++.+|.||.|+..
T Consensus 271 ~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 271 EKKLSSYAQSHLENTSIKVHLRTAVAKVEE--KQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEECS--SEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred CHHHHHHHHHHHHhcceeeecCceEEEEeC--CceEEEEEecCcccceeeeccCEEEEccCC
Confidence 355667778888899999999999999974 343323444565 36899999998753
No 159
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=91.45 E-value=0.26 Score=48.18 Aligned_cols=56 Identities=16% Similarity=0.172 Sum_probs=42.7
Q ss_pred cchHHHHHHHHHcCc--EEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~--~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|. +|+++++|+++..++++....|++.+|++++||.||+|+..
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~ 145 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGP 145 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 455555555566665 79999999999986543233588889989999999999985
No 160
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=91.40 E-value=0.46 Score=42.18 Aligned_cols=52 Identities=12% Similarity=0.205 Sum_probs=38.7
Q ss_pred HHHHHHHHH-cCcEEEcCceeeEEEECCCCCEEEEEEcC---Ce--EEEcCEEEEecCh
Q 016397 136 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGDAYVFATPV 188 (390)
Q Consensus 136 ~~l~~~l~~-~G~~I~l~~~V~~I~~~~~g~v~~V~~~~---g~--~~~ad~VI~a~p~ 188 (390)
+.+.+.+++ .|++|+++++|++|..+ ++++.+|++.+ |+ ++.+|.||+++..
T Consensus 183 ~~~~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 183 QVLQDKLRSLKNVDIILNAQTTEVKGD-GSKVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp HHHHHHHHTCTTEEEESSEEEEEEEES-SSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHhhCCCeEEecCCceEEEEcC-CCcEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 455666776 69999999999999974 45565566653 53 6789999998753
No 161
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=91.34 E-value=0.36 Score=48.14 Aligned_cols=58 Identities=16% Similarity=0.115 Sum_probs=45.0
Q ss_pred ccchHHHHHHHHHc-Cc-EEEcCceeeEEEECCC--CCEEEEEE---cCCe--EEEcCEEEEecChh
Q 016397 132 ERLCLPIVEHIQSL-GG-EVRLNSRVQKIELNDD--GTVKNFLL---TNGN--VIDGDAYVFATPVD 189 (390)
Q Consensus 132 ~~l~~~l~~~l~~~-G~-~I~l~~~V~~I~~~~~--g~v~~V~~---~~g~--~~~ad~VI~a~p~~ 189 (390)
..+...|.+.+++. |+ +|+.+++|++|..+++ |++++|.+ .+|+ .+.|+.||+|+...
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 35677888887777 99 9999999999998543 27877764 4564 68999999988753
No 162
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=91.06 E-value=0.1 Score=48.74 Aligned_cols=44 Identities=7% Similarity=0.055 Sum_probs=36.7
Q ss_pred HHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 143 QSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 143 ~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
++.|++|+++++|+.++.+.++. .|++.+|+++.+|.||+++|.
T Consensus 213 ~~~gi~v~~~~~v~~v~~~~~~~--~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 213 ENALIEWHPGPDAAVVKTDTEAM--TVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp TTCSEEEECTTTTCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred HhcCcEEEeCceEEEEEecccce--EEEcCCCcEEEeeEEEEecCc
Confidence 45789999999999999865543 388899999999999998764
No 163
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=91.00 E-value=0.32 Score=43.34 Aligned_cols=54 Identities=19% Similarity=0.173 Sum_probs=42.5
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
.+.+.+.+.+++.|.++++ ++|++|..++ +.+ .|.+.+|+++.+|.||+|+...
T Consensus 71 ~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~-~~~-~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 71 DMIKVFNKHIEKYEVPVLL-DIVEKIENRG-DEF-VVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHHTTTCCEEE-SCEEEEEEC---CE-EEEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHcCCEEEE-EEEEEEEecC-CEE-EEEECCCCEEEcCEEEECcCCC
Confidence 4666677777778999999 9999999853 435 3788888889999999998765
No 164
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=90.84 E-value=0.43 Score=45.10 Aligned_cols=52 Identities=17% Similarity=0.236 Sum_probs=43.9
Q ss_pred CccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 131 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 131 ~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
...+.+.+.+.+++.|++++++++|+++.. + .|++.+|+++.+|.||+++..
T Consensus 187 d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~---~---~v~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 187 DADMNQPILDELDKREIPYRLNEEINAING---N---EITFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp CGGGGHHHHHHHHHTTCCEEESCCEEEEET---T---EEEETTSCEEECSEEEECCCE
T ss_pred cchhHHHHHHHhhccceEEEeccEEEEecC---C---eeeecCCeEEeeeeEEEEece
Confidence 356778899999999999999999999863 2 267789999999999999874
No 165
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=90.75 E-value=0.55 Score=41.76 Aligned_cols=50 Identities=24% Similarity=0.290 Sum_probs=37.7
Q ss_pred HHHHHHHH-cCcEEEcCceeeEEEECCCCCEEEEEEcC---Ce--EEEcCEEEEecCh
Q 016397 137 PIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGDAYVFATPV 188 (390)
Q Consensus 137 ~l~~~l~~-~G~~I~l~~~V~~I~~~~~g~v~~V~~~~---g~--~~~ad~VI~a~p~ 188 (390)
.+.+.+.+ .|++++++++|++|..+ +++.+|++.+ |+ ++.+|.||++++.
T Consensus 194 ~~~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 249 (323)
T 3f8d_A 194 IYVETVKKKPNVEFVLNSVVKEIKGD--KVVKQVVVENLKTGEIKELNVNGVFIEIGF 249 (323)
T ss_dssp HHHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhCCCcEEEeCCEEEEEecc--CceeEEEEEECCCCceEEEEcCEEEEEECC
Confidence 44555554 49999999999999974 3454577765 75 7899999999865
No 166
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=90.74 E-value=0.31 Score=43.48 Aligned_cols=45 Identities=22% Similarity=0.262 Sum_probs=36.2
Q ss_pred CCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhhhh
Q 016397 330 PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 375 (390)
Q Consensus 330 ~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~~~ 375 (390)
+.++|..+|||.+||-+..++ ..+..|+.+|+.||..|...+..+
T Consensus 264 ~~~~Ts~pgIyA~GDv~~~~~-~~~~~A~~~G~~AA~~i~~~L~~l 308 (312)
T 4gcm_A 264 DDMTTSVPGIFAAGDVRDKGL-RQIVTATGDGSIAAQSAAEYIEHL 308 (312)
T ss_dssp TTSBCSSTTEEECSTTBSCSC-CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccCCCCEEEEeecCCCcc-hHHHHHHHHHHHHHHHHHHHHHhh
Confidence 456788999999999876533 367889999999999998887654
No 167
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=90.67 E-value=0.15 Score=46.06 Aligned_cols=42 Identities=21% Similarity=0.328 Sum_probs=31.0
Q ss_pred CCCCCCCeEEecccccCCC--C---CchhHHHHHHHHHHHHHHHHhh
Q 016397 332 QRSPVEGFYLAGDYTKQKY--L---ASMEGAVLSGKLCAQAIVQDYV 373 (390)
Q Consensus 332 ~~~~~~~l~~aGd~~~~~~--~---~~~~gA~~SG~~aA~~il~~~~ 373 (390)
..+.++|||.|||....-+ + ..+.+++.||++||+.|++.|.
T Consensus 279 ~~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 279 AYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp ECTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 3566899999999754211 0 2456778999999999999874
No 168
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=90.61 E-value=0.22 Score=47.25 Aligned_cols=56 Identities=20% Similarity=-0.001 Sum_probs=40.5
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcC---Ce---EEEcCEEEEecChhh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN---VIDGDAYVFATPVDI 190 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~---g~---~~~ad~VI~a~p~~~ 190 (390)
.+.+.|.+.++..+..|+++++|++|..++ +.+ .|++.+ |+ ++.+|+||+|+....
T Consensus 116 ~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~-~~~-~V~~~~~~~G~~~~~~~~d~VVvAtG~~s 177 (447)
T 2gv8_A 116 TIQEYQRIYAQPLLPFIKLATDVLDIEKKD-GSW-VVTYKGTKAGSPISKDIFDAVSICNGHYE 177 (447)
T ss_dssp HHHHHHHHHHGGGGGGEECSEEEEEEEEET-TEE-EEEEEESSTTCCEEEEEESEEEECCCSSS
T ss_pred HHHHHHHHHHHHhhCeEEeCCEEEEEEeCC-CeE-EEEEeecCCCCeeEEEEeCEEEECCCCCC
Confidence 344555555555567899999999999854 434 366655 66 789999999998754
No 169
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=90.58 E-value=0.21 Score=48.19 Aligned_cols=57 Identities=14% Similarity=0.103 Sum_probs=42.4
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECC--CCCEEEEEE--c-CC--eEEEcCEEEEecChhh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELND--DGTVKNFLL--T-NG--NVIDGDAYVFATPVDI 190 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~--~g~v~~V~~--~-~g--~~~~ad~VI~a~p~~~ 190 (390)
.+.+.|.+.+++.|++|+++++|++|..++ ++.+ .|++ . +| ++++||.||.|+....
T Consensus 167 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~-~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 167 QLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGW-RAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCB-EEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEE-EEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 455667777777899999999999999742 2223 4666 3 55 4689999999998754
No 170
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=90.47 E-value=0.35 Score=47.90 Aligned_cols=55 Identities=15% Similarity=0.199 Sum_probs=43.8
Q ss_pred cchHHHHHHHHH-cCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~-~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
.+.+.|.+.+++ .|++|. +..|+.|..+ ++++++|.+.+|+++.||.||+|+...
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d-~g~V~GV~t~~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSAN-SGKFSSVTVRSGRAIQAKAAILACGTF 173 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEec-CCEEEEEEECCCcEEEeCEEEECcCCC
Confidence 456777777776 488984 5699999875 456777888889899999999998864
No 171
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=90.38 E-value=0.19 Score=46.80 Aligned_cols=48 Identities=10% Similarity=0.072 Sum_probs=37.6
Q ss_pred CcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh-Hhhhc
Q 016397 146 GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI-LKLQL 195 (390)
Q Consensus 146 G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~-~~~ll 195 (390)
+++|+++++|++|..++++ + .|++.+|++++||.||.|..... +.+.+
T Consensus 140 ~~~i~~~~~v~~i~~~~~~-v-~v~~~~g~~~~ad~vV~AdG~~S~vR~~l 188 (398)
T 2xdo_A 140 NDTVIWDRKLVMLEPGKKK-W-TLTFENKPSETADLVILANGGMSKVRKFV 188 (398)
T ss_dssp TTSEEESCCEEEEEECSSS-E-EEEETTSCCEEESEEEECSCTTCSCCTTT
T ss_pred CCEEEECCEEEEEEECCCE-E-EEEECCCcEEecCEEEECCCcchhHHhhc
Confidence 4689999999999986544 6 38888898899999999988743 34443
No 172
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=90.36 E-value=0.49 Score=46.09 Aligned_cols=55 Identities=11% Similarity=0.107 Sum_probs=40.5
Q ss_pred chHHHHHHHHHcC--cEEEcCceeeEEEECCC-CCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 134 LCLPIVEHIQSLG--GEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 134 l~~~l~~~l~~~G--~~I~l~~~V~~I~~~~~-g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
+.+.|....++.+ .+|+++++|+++..+++ +.+ .|++.+|++++||.||+|+...
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w-~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTW-TVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEE-EEEETTCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeE-EEEECCCCEEEeCEEEECcCCC
Confidence 4444444444444 67999999999998654 334 4888889889999999999853
No 173
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=90.31 E-value=0.34 Score=45.62 Aligned_cols=50 Identities=14% Similarity=0.089 Sum_probs=39.0
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcC----CeEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----GNVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~----g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|+. ++ + ++.+ |+++.+|.||++++.
T Consensus 201 ~~~~~l~~~l~~~GV~i~~~~~v~~v~~--~~-v---~~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 201 ASKRLVEDLFAERNIDWIANVAVKAIEP--DK-V---IYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp THHHHHHHHHHHTTCEEECSCEEEEECS--SE-E---EEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEeC--Ce-E---EEEecCCCceEEeeeEEEECCCC
Confidence 3567788889999999999999999974 33 3 3334 678999999998653
No 174
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=90.17 E-value=0.83 Score=41.65 Aligned_cols=44 Identities=23% Similarity=0.305 Sum_probs=35.6
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
..+...|.+.+++.|++|+. ++|++|..+ . + +||.||+|+....
T Consensus 142 ~~~~~~l~~~~~~~G~~i~~-~~v~~l~~~----~---------~-~a~~VV~A~G~~s 185 (363)
T 1c0p_A 142 PKYCQYLARELQKLGATFER-RTVTSLEQA----F---------D-GADLVVNATGLGA 185 (363)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCSBGGGT----C---------S-SCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEcccHhhc----C---------c-CCCEEEECCCcch
Confidence 46788888988899999998 999988642 1 1 7899999998765
No 175
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=90.15 E-value=0.43 Score=42.42 Aligned_cols=53 Identities=19% Similarity=0.300 Sum_probs=41.6
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|.++++ ++|++|..++ +.+ .|++.+|+++++|.||+|+..
T Consensus 60 ~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~-~~~-~v~~~~g~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 60 DFMQPWQEQCFRFGLKHEM-TAVQRVSKKD-SHF-VILAEDGKTFEAKSVIIATGG 112 (311)
T ss_dssp HHHHHHHHHHHTTSCEEEC-SCEEEEEEET-TEE-EEEETTSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCEEEE-EEEEEEEEcC-CEE-EEEEcCCCEEECCEEEECCCC
Confidence 4566677777778999998 7999999853 334 377778888999999999885
No 176
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=89.99 E-value=0.46 Score=42.70 Aligned_cols=53 Identities=15% Similarity=0.261 Sum_probs=42.1
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
.+.+.+.+.+++.|.++++++ |++|..+++ .+ .|++ +|+++++|.||+|+...
T Consensus 71 ~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~-~~-~v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 71 ELTDKFRKQSERFGTTIFTET-VTKVDFSSK-PF-KLFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-CCEEECSSS-SE-EEEC-SSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEEeE-EEEEEEcCC-EE-EEEE-CCcEEEcCEEEECCCCC
Confidence 566777777778899999997 999997543 35 3666 78889999999998864
No 177
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=89.98 E-value=0.48 Score=45.18 Aligned_cols=57 Identities=23% Similarity=0.231 Sum_probs=41.8
Q ss_pred cchHHHHHHHHHcCcE--EEcCceeeEEEECCCC-CEEEEEEcC---C--eEEEcCEEEEecChhh
Q 016397 133 RLCLPIVEHIQSLGGE--VRLNSRVQKIELNDDG-TVKNFLLTN---G--NVIDGDAYVFATPVDI 190 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~--I~l~~~V~~I~~~~~g-~v~~V~~~~---g--~~~~ad~VI~a~p~~~ 190 (390)
.+.+.|.+.+++.|.+ |+++++|++|..++++ .+ .|++.+ | .++.+|+||+|+....
T Consensus 102 ~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~-~V~~~~~~~g~~~~~~~d~VVvAtG~~s 166 (464)
T 2xve_A 102 VLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTF-TVTVQDHTTDTIYSEEFDYVVCCTGHFS 166 (464)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEE-EEEEEETTTTEEEEEEESEEEECCCSSS
T ss_pred HHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcE-EEEEEEcCCCceEEEEcCEEEECCCCCC
Confidence 4556666667777877 9999999999985442 33 366654 4 5689999999998543
No 178
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=89.92 E-value=0.69 Score=41.05 Aligned_cols=52 Identities=12% Similarity=0.043 Sum_probs=38.6
Q ss_pred HHHHHHHHH-cCcEEEcCceeeEEEECCCCCEEEEEEc---CCe--EEEcCEEEEecCh
Q 016397 136 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPV 188 (390)
Q Consensus 136 ~~l~~~l~~-~G~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~ 188 (390)
..+.+.+.+ .|++|+++++|++|..+ ++++.+|++. +|+ ++.+|.||+++..
T Consensus 182 ~~~~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 182 PITLEHAKNNDKIEFLTPYVVEEIKGD-ASGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp HHHHHHHHTCTTEEEETTEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHhhCCCeEEEeCCEEEEEECC-CCcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 456666654 69999999999999874 3445456665 565 6899999998754
No 179
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=89.88 E-value=0.19 Score=50.62 Aligned_cols=51 Identities=18% Similarity=0.088 Sum_probs=39.2
Q ss_pred chHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEE---cCCeEEEcCEEEEecCh
Q 016397 134 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGNVIDGDAYVFATPV 188 (390)
Q Consensus 134 l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~---~~g~~~~ad~VI~a~p~ 188 (390)
+.+.+.+.+++.|++|+++++|++|.. ++ + .++. .+++++.+|.||+|+..
T Consensus 569 ~~~~l~~~l~~~GV~i~~~~~V~~i~~--~~-~-~v~~~~~~~~~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 569 EVNRIQRRLIENGVARVTDHAVVAVGA--GG-V-TVRDTYASIERELECDAVVMVTAR 622 (690)
T ss_dssp CHHHHHHHHHHTTCEEEESEEEEEEET--TE-E-EEEETTTCCEEEEECSEEEEESCE
T ss_pred hHHHHHHHHHHCCCEEEcCcEEEEEEC--Ce-E-EEEEccCCeEEEEECCEEEECCCC
Confidence 456778888899999999999999985 33 2 2332 24567899999999875
No 180
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.77 E-value=0.34 Score=44.63 Aligned_cols=49 Identities=22% Similarity=0.307 Sum_probs=40.0
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|.. + +|++.+|+ +.+|.||+++..
T Consensus 184 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~--~----~v~~~~g~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 184 ELSNMIKDMLEETGVKFFLNSELLEANE--E----GVLTNSGF-IEGKVKICAIGI 232 (367)
T ss_dssp HHHHHHHHHHHHTTEEEECSCCEEEECS--S----EEEETTEE-EECSCEEEECCE
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEe--e----EEEECCCE-EEcCEEEECcCC
Confidence 4556777888889999999999999972 2 26677887 999999999874
No 181
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=89.70 E-value=0.86 Score=40.75 Aligned_cols=51 Identities=12% Similarity=0.050 Sum_probs=38.2
Q ss_pred HHHHHHHHH-cCcEEEcCceeeEEEECCCCCEEEEEEc---CCe--EEEcCEEEEecCh
Q 016397 136 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPV 188 (390)
Q Consensus 136 ~~l~~~l~~-~G~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~ 188 (390)
..+.+.+.+ .|++|+++++|++|..+ +++.+|++. +|+ ++.+|.||+++..
T Consensus 191 ~~~~~~l~~~~gv~i~~~~~v~~i~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 191 KVAQARAFANPKMKFIWDTAVEEIQGA--DSVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred hHHHHHHHhcCCceEecCCceEEEccC--CcEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 455566654 59999999999999973 445557665 564 6899999998754
No 182
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=89.65 E-value=0.43 Score=47.73 Aligned_cols=57 Identities=12% Similarity=0.130 Sum_probs=45.4
Q ss_pred ccchHHHHHHHHHc--CcEEEcCceeeEEEECCC--CCEEEEEE---cCCe--EEEcCEEEEecCh
Q 016397 132 ERLCLPIVEHIQSL--GGEVRLNSRVQKIELNDD--GTVKNFLL---TNGN--VIDGDAYVFATPV 188 (390)
Q Consensus 132 ~~l~~~l~~~l~~~--G~~I~l~~~V~~I~~~~~--g~v~~V~~---~~g~--~~~ad~VI~a~p~ 188 (390)
..+...|.+.+++. |++|+.++.|++|..+++ |++++|.. .+|+ .+.|+.||+|+..
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGG 231 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCc
Confidence 36778888888877 999999999999998644 37878765 3453 5789999999875
No 183
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=89.46 E-value=0.7 Score=41.30 Aligned_cols=51 Identities=12% Similarity=0.113 Sum_probs=38.5
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcC-----CeEEEcCEEEEecCh
Q 016397 136 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-----GNVIDGDAYVFATPV 188 (390)
Q Consensus 136 ~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~-----g~~~~ad~VI~a~p~ 188 (390)
+...+.+++.|++++++++|++|..++ + +.+|++.+ ++++.+|.||++++.
T Consensus 193 ~~~~~~l~~~gv~~~~~~~v~~i~~~~-~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 193 EHSVENLHASKVNVLTPFVPAELIGED-K-IEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp HHHHHHHHHSSCEEETTEEEEEEECSS-S-CCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhcCCeEEEeCceeeEEecCC-c-eEEEEEEecCCCceEEEECCEEEEeecc
Confidence 445566788999999999999999753 3 22466655 357899999998764
No 184
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=89.33 E-value=0.61 Score=45.16 Aligned_cols=56 Identities=16% Similarity=0.222 Sum_probs=43.5
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECC--CCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELND--DGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~--~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
.+.+.+.+.+++.|++++++++|++|..+. ++.+ .|++.+|+++.+|.||+|+...
T Consensus 268 ~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~-~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 268 KLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLH-QIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCE-EEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceE-EEEECCCCEEEcCEEEECCCCC
Confidence 345666777777899999999999998632 2234 4788888889999999999863
No 185
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=89.25 E-value=1.1 Score=43.55 Aligned_cols=40 Identities=33% Similarity=0.505 Sum_probs=34.1
Q ss_pred CCC-CCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 016397 332 QRS-PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 373 (390)
Q Consensus 332 ~~~-~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~ 373 (390)
..+ .++|||.|||... |.+|+-.|..+|.++|+.|+..+.
T Consensus 503 ~~~~~~~gly~~GegaG--~a~gi~~Aa~~G~~~a~~i~~~~~ 543 (549)
T 3nlc_A 503 FQSVNLKGFYPAGEGAG--YAGGILSAGIDGIKVAEAVARDIV 543 (549)
T ss_dssp TSCTTCBTEEECHHHHT--SCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred ceECCcCCEEEccccCC--hhhHHHHHHHHHHHHHHHHHHHhh
Confidence 445 5899999999875 447999999999999999998875
No 186
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=89.23 E-value=0.48 Score=45.28 Aligned_cols=56 Identities=25% Similarity=0.269 Sum_probs=43.2
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcC-CeEEEcCEEEEecChh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-GNVIDGDAYVFATPVD 189 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~-g~~~~ad~VI~a~p~~ 189 (390)
..+.+.|.+.+++.|++|+.+++| +|..+ ++++++|.+.+ +.++.+|.||+|+...
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~~~g~~~a~~VVlAtGg~ 175 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVK-DGKVTGFVTEKRGLVEDVDKLVLATGGY 175 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEE-TTEEEEEEETTTEEECCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEe-CCEEEEEEEEeCCCeEEeeeEEECCCCC
Confidence 357788888887789999999999 99875 46666666532 2357899999998764
No 187
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=89.20 E-value=0.78 Score=44.03 Aligned_cols=53 Identities=13% Similarity=-0.008 Sum_probs=40.7
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc--CC--eEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NG--NVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~--~g--~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++. ++|+++++|++|..+++ .+. |++. +| +++.+|.||+|+..
T Consensus 216 ~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~-~v~-v~~~~~~G~~~~i~~D~Vi~a~G~ 272 (492)
T 3ic9_A 216 EMKRYAEKTFNEE-FYFDAKARVISTIEKED-AVE-VIYFDKSGQKTTESFQYVLAATGR 272 (492)
T ss_dssp HHHHHHHHHHHTT-SEEETTCEEEEEEECSS-SEE-EEEECTTCCEEEEEESEEEECSCC
T ss_pred HHHHHHHHHHhhC-cEEEECCEEEEEEEcCC-EEE-EEEEeCCCceEEEECCEEEEeeCC
Confidence 4556667777666 99999999999998544 453 6664 67 67899999999875
No 188
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.15 E-value=0.44 Score=45.28 Aligned_cols=52 Identities=21% Similarity=0.234 Sum_probs=40.6
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCC--eEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g--~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|++|+++++|++|.. ++ + .++..+| +++.+|.||+|+..
T Consensus 213 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~-v-~v~~~~G~~~~i~~D~vv~a~G~ 266 (458)
T 1lvl_A 213 ELTAPVAESLKKLGIALHLGHSVEGYEN--GC-L-LANDGKGGQLRLEADRVLVAVGR 266 (458)
T ss_dssp HHHHHHHHHHHHHTCEEETTCEEEEEET--TE-E-EEECSSSCCCEECCSCEEECCCE
T ss_pred HHHHHHHHHHHHCCCEEEECCEEEEEEe--CC-E-EEEECCCceEEEECCEEEECcCC
Confidence 4556777888889999999999999985 33 4 3554456 57999999999875
No 189
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=89.07 E-value=0.99 Score=40.72 Aligned_cols=39 Identities=13% Similarity=0.187 Sum_probs=29.4
Q ss_pred cchHHHHHHHHHc-CcEEEcCceeeEEEECC--C-C--CEEEEEE
Q 016397 133 RLCLPIVEHIQSL-GGEVRLNSRVQKIELND--D-G--TVKNFLL 171 (390)
Q Consensus 133 ~l~~~l~~~l~~~-G~~I~l~~~V~~I~~~~--~-g--~v~~V~~ 171 (390)
.+...|.+.+.+. |++|+.+++|+++..++ + | ++++|.+
T Consensus 147 ~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv 191 (326)
T 2gjc_A 147 LFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVT 191 (326)
T ss_dssp HHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEE
T ss_pred HHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEe
Confidence 4567777777764 89999999999999863 3 4 6778766
No 190
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=88.62 E-value=0.78 Score=43.46 Aligned_cols=43 Identities=21% Similarity=0.244 Sum_probs=33.5
Q ss_pred cCcEEEcCceeeEEEECCCCCEEEEEEc---CCe--EEEcCEEEEecChh
Q 016397 145 LGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVD 189 (390)
Q Consensus 145 ~G~~I~l~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~~ 189 (390)
.|++|+++++|++|..++ +.+ .|++. +|+ ++.+|.||+|+...
T Consensus 329 ~~v~i~~~~~v~~v~~~~-~~~-~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATA-QGI-ELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp CCSEEETTEEEEEEEEET-TEE-EEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred CCeEEEeCCEEEEEEecC-CEE-EEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 589999999999999854 334 36665 665 48999999998763
No 191
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=88.44 E-value=1.1 Score=40.26 Aligned_cols=53 Identities=13% Similarity=0.109 Sum_probs=38.0
Q ss_pred HHHHHH-HHHcCcEEEcCceeeEEEECCCC-CEEEEEEc---CC--eEEEcCEEEEecCh
Q 016397 136 LPIVEH-IQSLGGEVRLNSRVQKIELNDDG-TVKNFLLT---NG--NVIDGDAYVFATPV 188 (390)
Q Consensus 136 ~~l~~~-l~~~G~~I~l~~~V~~I~~~~~g-~v~~V~~~---~g--~~~~ad~VI~a~p~ 188 (390)
+.+.+. +++.|++|+++++|++|..++++ ++.+|++. +| +++.+|.||+++..
T Consensus 198 ~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 257 (333)
T 1vdc_A 198 KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGH 257 (333)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCC
Confidence 455533 45679999999999999975321 45456664 45 47899999999764
No 192
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=88.39 E-value=0.65 Score=43.27 Aligned_cols=60 Identities=25% Similarity=0.398 Sum_probs=43.4
Q ss_pred cchHHHHHHHHH-cC-cEEEcCceeeEEEECCCCCEEEEEEcC---C--eEEEcCEEEEecChh-hHhhhc
Q 016397 133 RLCLPIVEHIQS-LG-GEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYVFATPVD-ILKLQL 195 (390)
Q Consensus 133 ~l~~~l~~~l~~-~G-~~I~l~~~V~~I~~~~~g~v~~V~~~~---g--~~~~ad~VI~a~p~~-~~~~ll 195 (390)
.|.+.|.+.+++ .| ++|+++++|++|.. +++ ++ |++.+ | ++++||.||.|.... .+.+.+
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l 175 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG-RV-LIGARDGHGKPQALGADVLVGADGIHSAVRAHL 175 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT-EE-EEEEEETTSCEEEEEESEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc-cE-EEEecCCCCCceEEecCEEEECCCccchhHHHh
Confidence 355667777765 36 48999999999998 555 53 66655 7 578999999998874 444443
No 193
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=88.16 E-value=1 Score=40.28 Aligned_cols=55 Identities=16% Similarity=0.217 Sum_probs=41.9
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEEC--CCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELN--DDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~--~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
.+.+.+.+.+++.|.+++. ++|++|..+ +++.+ .|.+.+|+++.+|.||+|+...
T Consensus 66 ~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~-~v~~~~g~~~~~~~vv~AtG~~ 122 (325)
T 2q7v_A 66 ELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYP-FTVRGYNGEYRAKAVILATGAD 122 (325)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCC-EEEEESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceE-EEEECCCCEEEeCEEEECcCCC
Confidence 4666777777788999988 689999985 33213 3667788889999999998863
No 194
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=87.67 E-value=1.1 Score=40.65 Aligned_cols=57 Identities=9% Similarity=0.129 Sum_probs=41.9
Q ss_pred cchHHHHHHHHH-cCcEEEcCceeeEEEECCC----------------C--CEEEEEEc--------------CCeEEEc
Q 016397 133 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDD----------------G--TVKNFLLT--------------NGNVIDG 179 (390)
Q Consensus 133 ~l~~~l~~~l~~-~G~~I~l~~~V~~I~~~~~----------------g--~v~~V~~~--------------~g~~~~a 179 (390)
.+.+.|.+.+.+ .|++|+.++.|+++..+++ + ++.+|.+. ++.+++|
T Consensus 161 d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~A 240 (344)
T 3jsk_A 161 LFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINA 240 (344)
T ss_dssp HHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEEC
T ss_pred HHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEc
Confidence 345677777776 5899999999999987542 3 56677652 2247899
Q ss_pred CEEEEecChh
Q 016397 180 DAYVFATPVD 189 (390)
Q Consensus 180 d~VI~a~p~~ 189 (390)
+.||.|+...
T Consensus 241 k~VV~ATG~~ 250 (344)
T 3jsk_A 241 PVIISTTGHD 250 (344)
T ss_dssp SEEEECCCSS
T ss_pred CEEEECCCCC
Confidence 9999998764
No 195
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=87.60 E-value=1.1 Score=40.31 Aligned_cols=53 Identities=17% Similarity=0.317 Sum_probs=41.3
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEE-EEcCCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNF-LLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V-~~~~g~~~~ad~VI~a~p~~ 189 (390)
.+.+.+.+.+++.|.++++++ |++|.. ++. + .| .+.+|+++.+|.||+|+...
T Consensus 72 ~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~-~-~v~~~~~g~~~~~d~lviAtG~~ 125 (335)
T 2a87_A 72 ELMDEMREQALRFGADLRMED-VESVSL-HGP-L-KSVVTADGQTHRARAVILAMGAA 125 (335)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEEC-SSS-S-EEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEEee-EEEEEe-CCc-E-EEEEeCCCCEEEeCEEEECCCCC
Confidence 466677777777899999998 999987 333 3 36 67778889999999998763
No 196
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=87.50 E-value=0.52 Score=43.02 Aligned_cols=51 Identities=18% Similarity=0.277 Sum_probs=39.0
Q ss_pred HHHHHHHHHcC-cEEEcCceeeEEEECCCCCEEEEEEcCCeEEE-cCEEEEecCh
Q 016397 136 LPIVEHIQSLG-GEVRLNSRVQKIELNDDGTVKNFLLTNGNVID-GDAYVFATPV 188 (390)
Q Consensus 136 ~~l~~~l~~~G-~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~-ad~VI~a~p~ 188 (390)
+.+.+.+++.| ++|+++++|++|..++ +.+ .|++.+|+.+. +|.||+++..
T Consensus 218 ~~l~~~l~~~g~v~~~~~~~v~~i~~~~-~~~-~v~~~~g~~~~~~d~vi~a~G~ 270 (369)
T 3d1c_A 218 QRLGNVIKQGARIEMNVHYTVKDIDFNN-GQY-HISFDSGQSVHTPHEPILATGF 270 (369)
T ss_dssp HHHHHHHHTTCCEEEECSCCEEEEEEET-TEE-EEEESSSCCEEESSCCEECCCB
T ss_pred HHHHHHHhhCCcEEEecCcEEEEEEecC-Cce-EEEecCCeEeccCCceEEeecc
Confidence 66677777776 9999999999998643 333 47788887665 5999998875
No 197
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=87.10 E-value=0.7 Score=45.06 Aligned_cols=51 Identities=10% Similarity=0.060 Sum_probs=38.8
Q ss_pred HcCcEEEcCceeeEEEECCCCCEEEEEEcC---Ce--EEEcC-EEEEecChhhHhhh
Q 016397 144 SLGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGD-AYVFATPVDILKLQ 194 (390)
Q Consensus 144 ~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~---g~--~~~ad-~VI~a~p~~~~~~l 194 (390)
+.|.+|++++.|++|..++++++++|++.+ |+ ++.|+ .||+|+..-...+|
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~l 277 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKL 277 (546)
T ss_dssp CTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHH
T ss_pred CCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchh
Confidence 468999999999999996436788888754 53 67898 89998877433444
No 198
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=86.99 E-value=0.54 Score=44.58 Aligned_cols=55 Identities=18% Similarity=0.091 Sum_probs=38.4
Q ss_pred chHHHHHHHHHcCcEEEcCceeeEEEECCC-CCE--EEEEEcCCe----EEEcCEEEEecCh
Q 016397 134 LCLPIVEHIQSLGGEVRLNSRVQKIELNDD-GTV--KNFLLTNGN----VIDGDAYVFATPV 188 (390)
Q Consensus 134 l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~-g~v--~~V~~~~g~----~~~ad~VI~a~p~ 188 (390)
+.+.+....+..|.+|+++++|++|..+++ ++. ..|++.+|+ ++.+|.||+|+..
T Consensus 129 ~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 129 FNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 444454444556889999999999997521 222 136666664 7899999999875
No 199
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=86.92 E-value=0.67 Score=41.13 Aligned_cols=43 Identities=21% Similarity=0.217 Sum_probs=34.0
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 374 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~~ 374 (390)
..+|..+|||.|||-+...+ ..+.-|+.+|..||..+.+.+..
T Consensus 271 ~~~Ts~pgIyA~GDv~~~~~-~~~~~A~~~G~~AA~~~~~yL~~ 313 (314)
T 4a5l_A 271 GPKTSVDGVFACGDVCDRVY-RQAIVAAGSGCMAALSCEKWLQT 313 (314)
T ss_dssp TTBCSSTTEEECSTTTCSSC-CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCccCCCCEEEEEeccCCcc-hHHHHHHHHHHHHHHHHHHHHhc
Confidence 45788999999999876532 24667888999999999887754
No 200
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=86.57 E-value=0.77 Score=40.23 Aligned_cols=40 Identities=20% Similarity=0.364 Sum_probs=34.1
Q ss_pred CCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 016397 332 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 373 (390)
Q Consensus 332 ~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~ 373 (390)
.++..+|||.+||.... |..+..|+.+|..||..|.+.+.
T Consensus 253 ~~t~~~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 253 KQTTARGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSIL 292 (297)
T ss_dssp CBCSSTTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHHh
Confidence 45678999999998874 36889999999999999988764
No 201
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=86.52 E-value=1.1 Score=40.17 Aligned_cols=53 Identities=21% Similarity=0.326 Sum_probs=41.9
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEE---cCCeEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGNVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~---~~g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++.|+++++++ |++|..++ +.+ .+.+ .++.++.+|.||+|+..
T Consensus 85 ~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~-~~~-~v~~~~~~~~~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 85 ELMDRMREQSTKFGTEIITET-VSKVDLSS-KPF-KLWTEFNEDAEPVTTDAIILATGA 140 (338)
T ss_dssp HHHHHHHHHHHHTTCEEECSC-EEEEECSS-SSE-EEEETTCSSSCCEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCEEEEeE-EEEEEEcC-CEE-EEEEEecCCCcEEEeCEEEECcCC
Confidence 566777788888899999999 99999853 445 3555 35678999999999876
No 202
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=86.20 E-value=0.74 Score=44.82 Aligned_cols=57 Identities=9% Similarity=0.021 Sum_probs=41.2
Q ss_pred HHHHHHHH-cCcEEEcCceeeEEEECCCCCEEEEEEcC---Ce--EE---EcCEEEEecChhhHhhh
Q 016397 137 PIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VI---DGDAYVFATPVDILKLQ 194 (390)
Q Consensus 137 ~l~~~l~~-~G~~I~l~~~V~~I~~~~~g~v~~V~~~~---g~--~~---~ad~VI~a~p~~~~~~l 194 (390)
++.+.+.+ .+.+|++++.|++|..+ ++++++|++.+ |+ ++ .++.||+|+..-...+|
T Consensus 200 ~~l~~~~~~~~~~i~~~~~V~~i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~l 265 (546)
T 1kdg_A 200 TYLQTALARPNFTFKTNVMVSNVVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRI 265 (546)
T ss_dssp THHHHHHTCTTEEEECSCCEEEEEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHH
T ss_pred HHHHHHhhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHH
Confidence 34454444 57999999999999985 56788898865 63 33 78999999877444444
No 203
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=85.85 E-value=1.2 Score=39.35 Aligned_cols=63 Identities=13% Similarity=0.211 Sum_probs=46.0
Q ss_pred CceEEeecCCCCccchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEec
Q 016397 120 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFAT 186 (390)
Q Consensus 120 ~~~~~~~~GG~~~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~ 186 (390)
+....+...+ ..+.+.+.+.+++.|.+++.++ |+.+..+ +++++.|++.+|+++.+|.+|+++
T Consensus 170 ~~~v~i~~~~--~~~~~~~~~~l~~~g~~~~~~~-v~~~~~~-~~~~~~v~~~~g~~i~~~~~vi~~ 232 (304)
T 4fk1_A 170 STDLVIATNG--NELSQTIMDELSNKNIPVITES-IRTLQGE-GGYLKKVEFHSGLRIERAGGFIVP 232 (304)
T ss_dssp CSCEEEECSS--CCCCHHHHHHHHTTTCCEECSC-EEEEESG-GGCCCEEEETTSCEECCCEEEECC
T ss_pred CceEEEEecc--ccchhhhhhhhhccceeEeeee-EEEeecC-CCeeeeeeccccceeeecceeeee
Confidence 3345555555 4678888899998999998775 7777763 455667889999888888777653
No 204
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=85.78 E-value=1.4 Score=39.17 Aligned_cols=53 Identities=19% Similarity=0.288 Sum_probs=40.9
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
.+.+.+.+.+++.|.++++++ |+.|..++ +.+ .| +.+|+++.+|.||+|+...
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~-~~~-~v-~~~~~~~~~~~lv~AtG~~ 115 (320)
T 1trb_A 63 LLMERMHEHATKFETEIIFDH-INKVDLQN-RPF-RL-NGDNGEYTCDALIIATGAS 115 (320)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEECSS-SSE-EE-EESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEEee-eeEEEecC-CEE-EE-EeCCCEEEcCEEEECCCCC
Confidence 456667777778899999997 99998753 445 25 5678889999999998763
No 205
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=85.23 E-value=1.1 Score=42.21 Aligned_cols=52 Identities=17% Similarity=0.095 Sum_probs=38.4
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCC--eEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g--~~~~ad~VI~a~p~ 188 (390)
...+.+.+.++++|+++++++.|++|+. ++ +. ++..+| +++.+|.||++++.
T Consensus 201 ~~~~~l~~~l~~~GV~~~~~~~v~~v~~--~~-~~-~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 201 ASKRLVEDLFAERNIDWIANVAVKAIEP--DK-VI-YEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp THHHHHHHHHHHTTCEEECSCEEEEECS--SE-EE-EECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHhCCeEEEeCceEEEEeC--Cc-eE-EEeeCCCceEeecceEEEeccC
Confidence 3445667778889999999999999964 33 32 444444 47899999998764
No 206
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=85.00 E-value=1.3 Score=41.72 Aligned_cols=51 Identities=14% Similarity=0.038 Sum_probs=37.8
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEE--cC-----CeEEEcCEEEEecC
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TN-----GNVIDGDAYVFATP 187 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~--~~-----g~~~~ad~VI~a~p 187 (390)
.+.+.+.+.+++.|++++++++|++|+. ++ ++ ++. .+ ++++.+|.||++++
T Consensus 209 ~~~~~~~~~l~~~gI~~~~~~~v~~v~~--~~-v~-~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 209 DSKGILTKGLKEEGIEAYTNCKVTKVED--NK-MY-VTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp THHHHHHHHHHHTTCEEECSEEEEEEET--TE-EE-EEEECTTSCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEC--Ce-EE-EEecccCCccccceEEEEeEEEEcCC
Confidence 3566777888899999999999999974 33 31 222 23 45789999999865
No 207
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=84.96 E-value=1.1 Score=42.07 Aligned_cols=46 Identities=20% Similarity=0.239 Sum_probs=37.3
Q ss_pred HHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 139 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 139 ~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
.+.+++.|++++++++|+.|..+ +. .|++.+|+++.+|.||+|+..
T Consensus 67 ~~~~~~~gv~~~~~~~v~~i~~~-~~---~v~~~~g~~~~~d~lviAtG~ 112 (431)
T 1q1r_A 67 PDAYAAQNIQLLGGTQVTAINRD-RQ---QVILSDGRALDYDRLVLATGG 112 (431)
T ss_dssp HHHHHHTTEEEECSCCEEEEETT-TT---EEEETTSCEEECSEEEECCCE
T ss_pred HHHHHhCCCEEEeCCEEEEEECC-CC---EEEECCCCEEECCEEEEcCCC
Confidence 34556779999999999999974 33 267788888999999999876
No 208
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=84.56 E-value=0.77 Score=42.19 Aligned_cols=44 Identities=25% Similarity=0.316 Sum_probs=34.8
Q ss_pred HHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 140 EHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 140 ~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
+.+++.|.+++++++|+.|..+ ++. |+ .+|+++.+|++|+|+..
T Consensus 68 ~~~~~~~v~~~~g~~v~~id~~--~~~--V~-~~g~~~~~d~lViATGs 111 (367)
T 1xhc_A 68 DWYRKRGIEIRLAEEAKLIDRG--RKV--VI-TEKGEVPYDTLVLATGA 111 (367)
T ss_dssp HHHHHHTEEEECSCCEEEEETT--TTE--EE-ESSCEEECSEEEECCCE
T ss_pred HHHHhCCcEEEECCEEEEEECC--CCE--EE-ECCcEEECCEEEECCCC
Confidence 4445679999999999999873 333 55 57888999999999875
No 209
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=84.32 E-value=1 Score=38.33 Aligned_cols=36 Identities=19% Similarity=0.354 Sum_probs=30.5
Q ss_pred CCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 016397 334 SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 372 (390)
Q Consensus 334 ~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~ 372 (390)
+.++|||.+||.. .. +....++.+|+.+|+.|++++
T Consensus 196 t~~p~iya~G~~a-~~--g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 196 KRLEGLYAVGLCV-RE--GDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp TTSBSEEECGGGT-SC--CCHHHHHHHHHHHHHHHHHHC
T ss_pred cccccceeeeecc-cC--ccHHHHHHHHHHHHHHHHhhc
Confidence 4689999999998 42 477788999999999998875
No 210
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=84.25 E-value=1.6 Score=41.55 Aligned_cols=44 Identities=14% Similarity=0.104 Sum_probs=33.4
Q ss_pred cCcEEEcCceeeEEEECCCC-CEEEEEEc---------------CC--eEEEcCEEEEecCh
Q 016397 145 LGGEVRLNSRVQKIELNDDG-TVKNFLLT---------------NG--NVIDGDAYVFATPV 188 (390)
Q Consensus 145 ~G~~I~l~~~V~~I~~~~~g-~v~~V~~~---------------~g--~~~~ad~VI~a~p~ 188 (390)
.|++|++++.+++|..++++ ++.+|++. +| +++.+|.||.++..
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~ 331 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGY 331 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCE
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCC
Confidence 78999999999999875335 56556543 34 47899999999864
No 211
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=84.15 E-value=1.3 Score=41.18 Aligned_cols=46 Identities=17% Similarity=0.250 Sum_probs=37.0
Q ss_pred HHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 140 EHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 140 ~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
+.+++.|.+++++++|++|..+ ++. |++.+|+++.+|++|+|+...
T Consensus 65 ~~~~~~~i~~~~~~~v~~id~~--~~~--v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 65 DWYGEARIDMLTGPEVTALDVQ--TRT--ISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp THHHHTTCEEEESCCEEEEETT--TTE--EEETTSCEEECSEEEECCCEE
T ss_pred HHHHHCCCEEEeCCEEEEEECC--CCE--EEECCCCEEECCEEEEccCCc
Confidence 3445679999999999999874 332 778889899999999998753
No 212
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=84.00 E-value=1.6 Score=45.70 Aligned_cols=50 Identities=18% Similarity=0.271 Sum_probs=39.1
Q ss_pred HHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcC-------C--eEEEcCEEEEecCh
Q 016397 139 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-------G--NVIDGDAYVFATPV 188 (390)
Q Consensus 139 ~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~-------g--~~~~ad~VI~a~p~ 188 (390)
.+.+++.|++|++++.|++|..++++++.+|++.+ | +++.+|.||+++..
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 66778899999999999999873234465676654 5 57899999999874
No 213
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=83.97 E-value=1.5 Score=38.79 Aligned_cols=42 Identities=21% Similarity=0.256 Sum_probs=34.2
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 373 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~ 373 (390)
..++..+|||.+||-.... |..+..|+..|..||..|.+.+.
T Consensus 271 ~~~t~~~~v~a~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~ 312 (315)
T 3r9u_A 271 KMQTSVAGLFAAGDLRKDA-PKQVICAAGDGAVAALSAMAYIE 312 (315)
T ss_dssp TCBCSSTTEEECGGGBTTC-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCEEEeecccCCc-hhhhhhHHhhHHHHHHHHHHHHH
Confidence 3456779999999987542 35789999999999999998774
No 214
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=83.95 E-value=1.9 Score=38.19 Aligned_cols=43 Identities=33% Similarity=0.346 Sum_probs=34.4
Q ss_pred CCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 016397 330 PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 373 (390)
Q Consensus 330 ~~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~ 373 (390)
+.++|.++|||.|||-+..++ ..+.-|+.+|..||..|..+|.
T Consensus 258 ~~~~Ts~p~IyA~GDv~~~~~-~~~~~A~~~G~~AA~~i~~~L~ 300 (304)
T 4fk1_A 258 DFGRTSEKNIYLAGETTTQGP-SSLIIAASQGNKAAIAINSDIT 300 (304)
T ss_dssp TTCBCSSTTEEECSHHHHTSC-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccCCCCEEEEeccCCCcc-hHHHHHHHHHHHHHHHHHHHHh
Confidence 346788999999999876533 3567799999999999988774
No 215
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=83.71 E-value=2 Score=41.53 Aligned_cols=51 Identities=10% Similarity=0.182 Sum_probs=38.1
Q ss_pred HHHHHHHHH-cCcEEEcCceeeEEEECCCCCEEEEEEcC---Ce--EEEcCEEEEecC
Q 016397 136 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGDAYVFATP 187 (390)
Q Consensus 136 ~~l~~~l~~-~G~~I~l~~~V~~I~~~~~g~v~~V~~~~---g~--~~~ad~VI~a~p 187 (390)
..+.+.+++ .|++|++++.|++|..+ ++++.+|++.+ |+ ++.+|.||+++.
T Consensus 394 ~~l~~~l~~~~gV~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 450 (521)
T 1hyu_A 394 QVLQDKVRSLKNVDIILNAQTTEVKGD-GSKVVGLEYRDRVSGDIHSVALAGIFVQIG 450 (521)
T ss_dssp HHHHHHHTTCTTEEEECSEEEEEEEEC-SSSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEcC-CCcEEEEEEEeCCCCceEEEEcCEEEECcC
Confidence 445666766 58999999999999974 45565676653 53 678999999865
No 216
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=83.53 E-value=1.2 Score=44.25 Aligned_cols=50 Identities=12% Similarity=0.121 Sum_probs=37.4
Q ss_pred cCcEEEcCceeeEEEECCC-CCEEEEEEcC---Ce--EEEcCEEEEecChhhHhhh
Q 016397 145 LGGEVRLNSRVQKIELNDD-GTVKNFLLTN---GN--VIDGDAYVFATPVDILKLQ 194 (390)
Q Consensus 145 ~G~~I~l~~~V~~I~~~~~-g~v~~V~~~~---g~--~~~ad~VI~a~p~~~~~~l 194 (390)
.|.+|++++.|++|..+++ +++++|++.+ |+ ++.||.||+++..-...++
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~l 328 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQL 328 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHH
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHH
Confidence 3789999999999998643 3677888753 54 6789999999876444333
No 217
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=83.53 E-value=1.8 Score=42.09 Aligned_cols=57 Identities=23% Similarity=0.304 Sum_probs=39.9
Q ss_pred chHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcC---C--eEEEcCEEEEecChh-hHhhhc
Q 016397 134 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYVFATPVD-ILKLQL 195 (390)
Q Consensus 134 l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~---g--~~~~ad~VI~a~p~~-~~~~ll 195 (390)
+.+.|.+.+++. |+++++|++|+.++++ ++ |++.+ | ++++||.||.|.... .+.+.+
T Consensus 140 l~~~L~~~a~~~---v~~~~~v~~~~~~~~~-v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~l 202 (549)
T 2r0c_A 140 LAPLLAEAVGER---LRTRSRLDSFEQRDDH-VR-ATITDLRTGATRAVHARYLVACDGASSPTRKAL 202 (549)
T ss_dssp HHHHHHHHHGGG---EECSEEEEEEEECSSC-EE-EEEEETTTCCEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHh---cccCcEEEEEEEeCCE-EE-EEEEECCCCCEEEEEeCEEEECCCCCcHHHHHc
Confidence 334555555544 9999999999986555 53 66654 6 478999999998774 344544
No 218
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=83.31 E-value=1.6 Score=39.27 Aligned_cols=50 Identities=24% Similarity=0.243 Sum_probs=37.3
Q ss_pred CCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhhhhhhhccccc
Q 016397 333 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRL 383 (390)
Q Consensus 333 ~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~~~~~~~~~~~ 383 (390)
.+..+|||.+||.....+ .....|+.+|..||..|...+....+.+.-.+
T Consensus 277 ~t~~~~iya~GD~~~~~~-~~~~~A~~~g~~aA~~i~~~l~~~~~~~~~~~ 326 (335)
T 2a87_A 277 STSLPGVFAAGDLVDRTY-RQAVTAAGSGCAAAIDAERWLAEHAATGEADS 326 (335)
T ss_dssp BCSSTTEEECGGGTCCSC-CCHHHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred ccCCCCEEEeeecCCccH-HHHHHHHHhHHHHHHHHHHHhhcCcCccccCC
Confidence 566789999999987532 46788999999999999998876665554433
No 219
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=83.29 E-value=0.4 Score=45.16 Aligned_cols=43 Identities=19% Similarity=0.210 Sum_probs=34.1
Q ss_pred HHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 142 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 142 l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
+++.|++++.+ +|++|+.+ + +. |++.+|+++.+|++|+|+...
T Consensus 66 ~~~~gv~~i~~-~v~~Id~~-~-~~--V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 66 LPKFNIEFINE-KAESIDPD-A-NT--VTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp GGGGTEEEECS-CEEEEETT-T-TE--EEETTCCEEECSEEEECCCCE
T ss_pred HHHCCcEEEEe-EEEEEECC-C-CE--EEECCCCEEECCEEEEeCCCC
Confidence 44568898766 79999974 3 33 788899999999999999864
No 220
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=81.63 E-value=2.3 Score=34.20 Aligned_cols=41 Identities=20% Similarity=0.077 Sum_probs=32.5
Q ss_pred CCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 016397 332 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 373 (390)
Q Consensus 332 ~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~ 373 (390)
.++..++||.+||-.....+ ....|+..|..||..|...+.
T Consensus 131 ~~t~~~~i~a~GD~~~~~~~-~~~~A~~~g~~aa~~i~~~~~ 171 (180)
T 2ywl_A 131 GRTSYPRVYAAGVARGKVPG-HAIISAGDGAYVAVHLVSDLR 171 (180)
T ss_dssp CBCSSTTEEECGGGGTCCSC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCEEEeecccCcchh-hHHHHHHhHHHHHHHHHHHhh
Confidence 34567899999998876432 678899999999999987653
No 221
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=81.54 E-value=2.7 Score=40.50 Aligned_cols=56 Identities=18% Similarity=0.148 Sum_probs=39.9
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEECCC---CCEEEEE--EcCC-e--EEEcCEEEEecCh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDD---GTVKNFL--LTNG-N--VIDGDAYVFATPV 188 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~---g~v~~V~--~~~g-~--~~~ad~VI~a~p~ 188 (390)
..+.+.+.+.+++.|++|++++.|++|...++ +.+ .|+ ..+| + ++.+|.||+++..
T Consensus 250 ~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~-~v~~~~~~g~~~~~~~~D~vi~a~G~ 313 (519)
T 3qfa_A 250 QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRL-RVVAQSTNSEEIIEGEYNTVMLAIGR 313 (519)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEE-EEEEEESSSSCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceE-EEEEEECCCcEEEEEECCEEEEecCC
Confidence 34567777788889999999999998876432 333 233 3455 2 5679999999875
No 222
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=81.39 E-value=2.3 Score=40.13 Aligned_cols=52 Identities=19% Similarity=0.266 Sum_probs=39.4
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
.+.+.+.+.+++. +++++++.|++|..+ + .+..+ ..+|+++.+|.||+++..
T Consensus 191 ~~~~~l~~~l~~~-v~i~~~~~v~~i~~~-~-~v~~v-~~~g~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 191 EVTDILEEKLKKH-VNLRLQEITMKIEGE-E-RVEKV-VTDAGEYKAELVILATGI 242 (449)
T ss_dssp HHHHHHHHHHTTT-SEEEESCCEEEEECS-S-SCCEE-EETTEEEECSEEEECSCE
T ss_pred HHHHHHHHHHHhC-cEEEeCCeEEEEecc-C-cEEEE-EeCCCEEECCEEEEeeCC
Confidence 4456667777777 999999999999864 3 34334 447788999999999875
No 223
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=81.34 E-value=1.2 Score=41.53 Aligned_cols=48 Identities=17% Similarity=0.227 Sum_probs=38.5
Q ss_pred HHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 137 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 137 ~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
...+.+.+.|.+++++++|++|..+ ++. |.+.+|+.+.+|++|+|+..
T Consensus 70 ~~~~~~~~~~i~~~~~~~v~~id~~--~~~--v~~~~g~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 70 RPAQFWEDKAVEMKLGAEVVSLDPA--AHT--VKLGDGSAIEYGKLIWATGG 117 (415)
T ss_dssp SCHHHHHHTTEEEEETCCEEEEETT--TTE--EEETTSCEEEEEEEEECCCE
T ss_pred CCHHHHHHCCcEEEeCCEEEEEECC--CCE--EEECCCCEEEeeEEEEccCC
Confidence 3345566789999999999999873 333 77888889999999999874
No 224
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=81.09 E-value=1.9 Score=42.33 Aligned_cols=51 Identities=14% Similarity=0.075 Sum_probs=38.3
Q ss_pred HcCcEEEcCceeeEEEECC---CCCEEEEEEc--CCe--EEEcC-EEEEecChhhHhhh
Q 016397 144 SLGGEVRLNSRVQKIELND---DGTVKNFLLT--NGN--VIDGD-AYVFATPVDILKLQ 194 (390)
Q Consensus 144 ~~G~~I~l~~~V~~I~~~~---~g~v~~V~~~--~g~--~~~ad-~VI~a~p~~~~~~l 194 (390)
+.+.+|++++.|++|..++ ++++++|++. +|+ ++.|+ .||+++..-...+|
T Consensus 239 r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqL 297 (583)
T 3qvp_A 239 RPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTI 297 (583)
T ss_dssp CTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHH
T ss_pred CCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHH
Confidence 4679999999999999863 5678899875 464 56775 69998876544444
No 225
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=80.99 E-value=2.1 Score=38.04 Aligned_cols=53 Identities=13% Similarity=0.151 Sum_probs=40.1
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
.+.+.+.+.+++.|.++++ ++|++|..++ +.+ .|.+ +|+++.+|.||+|+...
T Consensus 73 ~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~-~~~-~v~~-~~~~~~~~~li~AtG~~ 125 (319)
T 3cty_A 73 ELAKLFADHAANYAKIREG-VEVRSIKKTQ-GGF-DIET-NDDTYHAKYVIITTGTT 125 (319)
T ss_dssp HHHHHHHHHHHTTSEEEET-CCEEEEEEET-TEE-EEEE-SSSEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEE-eeEEEEEEeC-CEE-EEEE-CCCEEEeCEEEECCCCC
Confidence 4566677777778999988 7899999753 334 3666 56689999999998853
No 226
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=80.27 E-value=1.8 Score=41.05 Aligned_cols=42 Identities=19% Similarity=0.286 Sum_probs=33.2
Q ss_pred CcEEEcCceeeEEEECCCCCEEEEEEc--CCe--EEEcCEEEEecCh
Q 016397 146 GGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPV 188 (390)
Q Consensus 146 G~~I~l~~~V~~I~~~~~g~v~~V~~~--~g~--~~~ad~VI~a~p~ 188 (390)
.++|+++++|++|..++++.+ .|++. +|+ ++.+|.||+++..
T Consensus 225 ~v~i~~~~~v~~i~~~~~~~v-~v~~~~~~G~~~~i~~D~vi~a~G~ 270 (466)
T 3l8k_A 225 KLNIKFNSPVTEVKKIKDDEY-EVIYSTKDGSKKSIFTNSVVLAAGR 270 (466)
T ss_dssp CCCEECSCCEEEEEEEETTEE-EEEECCTTSCCEEEEESCEEECCCE
T ss_pred EEEEEECCEEEEEEEcCCCcE-EEEEEecCCceEEEEcCEEEECcCC
Confidence 489999999999998542445 37776 565 7899999999875
No 227
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=78.90 E-value=2.2 Score=40.40 Aligned_cols=41 Identities=20% Similarity=0.265 Sum_probs=34.6
Q ss_pred CCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 016397 332 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 374 (390)
Q Consensus 332 ~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~~ 374 (390)
.+|..+|||.+||-..+. ..+..|+..|+.||..|...+..
T Consensus 405 ~~Ts~~~VfA~GD~~~g~--~~v~~A~~~G~~aA~~i~~~L~~ 445 (456)
T 2vdc_G 405 KMTNMDGVFAAGDIVRGA--SLVVWAIRDGRDAAEGIHAYAKA 445 (456)
T ss_dssp CBCSSTTEEECGGGGSSC--CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEeccccCCc--hHHHHHHHHHHHHHHHHHHHhhc
Confidence 457789999999987652 67899999999999999988753
No 228
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=78.90 E-value=3.6 Score=41.13 Aligned_cols=50 Identities=24% Similarity=0.249 Sum_probs=38.3
Q ss_pred hHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCC--eEEEcCEEEEecChh
Q 016397 135 CLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPVD 189 (390)
Q Consensus 135 ~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g--~~~~ad~VI~a~p~~ 189 (390)
...+.+.|++.|++|+++++|++|.. ++ + .++ .+| +++.+|.||+++...
T Consensus 576 ~~~~~~~l~~~GV~v~~~~~v~~i~~--~~-v-~~~-~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 576 GWIHRTTLLSRGVKMIPGVSYQKIDD--DG-L-HVV-INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEEET--TE-E-EEE-ETTEEEEECCSEEEECCCEE
T ss_pred HHHHHHHHHhcCCEEEeCcEEEEEeC--Ce-E-EEe-cCCeEEEEeCCEEEECCCcc
Confidence 34556778889999999999999973 34 3 233 577 578999999998763
No 229
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=78.82 E-value=4.6 Score=39.60 Aligned_cols=57 Identities=12% Similarity=0.166 Sum_probs=39.8
Q ss_pred ccchHHHHHHHHHcCcEEEcCceeeEEEEC-----CC---CCEE-EEEEcCCeEEE--cCEEEEecCh
Q 016397 132 ERLCLPIVEHIQSLGGEVRLNSRVQKIELN-----DD---GTVK-NFLLTNGNVID--GDAYVFATPV 188 (390)
Q Consensus 132 ~~l~~~l~~~l~~~G~~I~l~~~V~~I~~~-----~~---g~v~-~V~~~~g~~~~--ad~VI~a~p~ 188 (390)
..+.+.+.+.+++.|++|++++.|++|... ++ +.+. .+...+|+++. +|.||+++..
T Consensus 326 ~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~ 393 (598)
T 2x8g_A 326 QQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGR 393 (598)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCC
Confidence 345667777888899999999999888642 11 4332 12235776555 9999999875
No 230
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=78.64 E-value=2.6 Score=40.82 Aligned_cols=53 Identities=15% Similarity=0.070 Sum_probs=38.7
Q ss_pred HHHcCcEEEcCceeeEEEECCC--CCEEEEEEc--CCe--EE---EcCEEEEecChhhHhhh
Q 016397 142 IQSLGGEVRLNSRVQKIELNDD--GTVKNFLLT--NGN--VI---DGDAYVFATPVDILKLQ 194 (390)
Q Consensus 142 l~~~G~~I~l~~~V~~I~~~~~--g~v~~V~~~--~g~--~~---~ad~VI~a~p~~~~~~l 194 (390)
+++.|.+|++++.|++|..+++ +++++|++. +|+ ++ .++.||+|+..-...+|
T Consensus 204 ~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~l 265 (536)
T 1ju2_A 204 GNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQL 265 (536)
T ss_dssp SCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHH
T ss_pred hcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHH
Confidence 3456899999999999998643 378888875 464 34 46899998876544444
No 231
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=76.53 E-value=2.8 Score=38.98 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=34.5
Q ss_pred HHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 143 QSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 143 ~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
++.|.+++++++|+.|..+ ++. |++.+|+++.+|++|+|+..
T Consensus 70 ~~~~v~~~~~~~v~~i~~~--~~~--v~~~~g~~~~~d~lviAtG~ 111 (408)
T 2gqw_A 70 RAPEVEWLLGVTAQSFDPQ--AHT--VALSDGRTLPYGTLVLATGA 111 (408)
T ss_dssp TSCSCEEEETCCEEEEETT--TTE--EEETTSCEEECSEEEECCCE
T ss_pred HHCCCEEEcCCEEEEEECC--CCE--EEECCCCEEECCEEEECCCC
Confidence 4568999999999999873 332 67778888999999999876
No 232
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=75.34 E-value=1.6 Score=42.72 Aligned_cols=52 Identities=12% Similarity=0.084 Sum_probs=37.8
Q ss_pred HHcCcEEEcCceeeEEEEC---CC-CCEEEEEEcC--C-e--EEEc-CEEEEecChhhHhhh
Q 016397 143 QSLGGEVRLNSRVQKIELN---DD-GTVKNFLLTN--G-N--VIDG-DAYVFATPVDILKLQ 194 (390)
Q Consensus 143 ~~~G~~I~l~~~V~~I~~~---~~-g~v~~V~~~~--g-~--~~~a-d~VI~a~p~~~~~~l 194 (390)
.+.+.+|++++.|++|..+ ++ +++++|++.+ | + ++.| +.||++...-...+|
T Consensus 219 ~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPql 280 (566)
T 3fim_B 219 SRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPIL 280 (566)
T ss_dssp TCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHH
T ss_pred cCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHH
Confidence 3467999999999999985 13 4677888753 4 3 5677 679998876555555
No 233
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=74.52 E-value=2.8 Score=41.14 Aligned_cols=51 Identities=12% Similarity=0.019 Sum_probs=37.8
Q ss_pred HcCcEEEcCceeeEEEECCC---CCEEEEEEc--CCe--EEEc-CEEEEecChhhHhhh
Q 016397 144 SLGGEVRLNSRVQKIELNDD---GTVKNFLLT--NGN--VIDG-DAYVFATPVDILKLQ 194 (390)
Q Consensus 144 ~~G~~I~l~~~V~~I~~~~~---g~v~~V~~~--~g~--~~~a-d~VI~a~p~~~~~~l 194 (390)
+.+.+|++++.|++|..+++ +++++|++. +|+ ++.| +.||+|+..-...+|
T Consensus 243 ~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~l 301 (587)
T 1gpe_A 243 RSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLI 301 (587)
T ss_dssp CTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHH
T ss_pred CCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHH
Confidence 45789999999999998542 467788774 564 5678 889998876444444
No 234
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=74.41 E-value=3.2 Score=38.96 Aligned_cols=47 Identities=21% Similarity=0.267 Sum_probs=36.3
Q ss_pred HHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 138 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 138 l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
+.+.+++.|++++. .+|++|+.+ ++ .|++.+|+++.+|+||+|+...
T Consensus 65 l~~~~~~~gv~~~~-~~v~~id~~-~~---~V~~~~g~~i~~d~lviAtG~~ 111 (437)
T 3sx6_A 65 IRHYVERKGIHFIA-QSAEQIDAE-AQ---NITLADGNTVHYDYLMIATGPK 111 (437)
T ss_dssp CHHHHHTTTCEEEC-SCEEEEETT-TT---EEEETTSCEEECSEEEECCCCE
T ss_pred HHHHHHHCCCEEEE-eEEEEEEcC-CC---EEEECCCCEEECCEEEECCCCC
Confidence 45566677999874 699999874 33 2778888889999999998763
No 235
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=74.25 E-value=2 Score=41.09 Aligned_cols=41 Identities=22% Similarity=0.294 Sum_probs=34.2
Q ss_pred HcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 144 SLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 144 ~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
+.|++++++++|++|..+ + +. |++.+|+++.+|++|+|+..
T Consensus 102 ~~gv~~~~g~~v~~id~~-~-~~--V~~~~g~~i~yd~lviATGs 142 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVR-D-NM--VKLNDGSQITYEKCLIATGG 142 (493)
T ss_dssp TCEEEEEETCCEEEEEGG-G-TE--EEETTSCEEEEEEEEECCCE
T ss_pred cCCeEEEcCCEEEEEECC-C-CE--EEECCCCEEECCEEEECCCC
Confidence 457899999999999974 3 32 77888988999999999875
No 236
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=72.00 E-value=5.9 Score=36.60 Aligned_cols=47 Identities=26% Similarity=0.287 Sum_probs=37.3
Q ss_pred HHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 137 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 137 ~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
...+.+.+.|.++++ ++|++|..+ ++. |++.+|+++.+|++|+|+..
T Consensus 62 ~~~~~~~~~~i~~~~-~~v~~id~~--~~~--v~~~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 62 RPEKFFQDQAIELIS-DRMVSIDRE--GRK--LLLASGTAIEYGHLVLATGA 108 (404)
T ss_dssp SCHHHHHHTTEEEEC-CCEEEEETT--TTE--EEESSSCEEECSEEEECCCE
T ss_pred CCHHHHHhCCCEEEE-EEEEEEECC--CCE--EEECCCCEEECCEEEEeeCC
Confidence 344556678999999 999999874 332 77888889999999999875
No 237
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=71.97 E-value=4.6 Score=37.36 Aligned_cols=42 Identities=21% Similarity=0.216 Sum_probs=34.5
Q ss_pred CCCC-CCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 016397 331 LQRS-PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 372 (390)
Q Consensus 331 ~~~~-~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~ 372 (390)
.+++ ..+|||.+||.+....|.....|..+|..||+.|...+
T Consensus 293 ~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 293 NMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp TSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 3444 57899999999875445677889999999999999987
No 238
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=71.86 E-value=3 Score=39.45 Aligned_cols=42 Identities=14% Similarity=0.091 Sum_probs=31.3
Q ss_pred cCcEEEcCceeeEEEECCCCCEEEEEEc----------------CC--eEEEcCEEEEecCh
Q 016397 145 LGGEVRLNSRVQKIELNDDGTVKNFLLT----------------NG--NVIDGDAYVFATPV 188 (390)
Q Consensus 145 ~G~~I~l~~~V~~I~~~~~g~v~~V~~~----------------~g--~~~~ad~VI~a~p~ 188 (390)
.|++|++++.|++|..+ +++.+|++. +| +++.||.||.++..
T Consensus 265 ~gv~i~~~~~~~~i~~~--~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~ 324 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK--RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGY 324 (456)
T ss_dssp EEEEEECSEEEEEEECS--SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCE
T ss_pred ceEEEEeCCCCeEEecC--CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccc
Confidence 68999999999999863 344344443 34 46899999999875
No 239
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=71.71 E-value=3.6 Score=40.32 Aligned_cols=51 Identities=14% Similarity=0.098 Sum_probs=37.3
Q ss_pred HcCcEEEcCceeeEEEECC-CCCEEEEEEc--CCe--EEEc-CEEEEecChhhHhhh
Q 016397 144 SLGGEVRLNSRVQKIELND-DGTVKNFLLT--NGN--VIDG-DAYVFATPVDILKLQ 194 (390)
Q Consensus 144 ~~G~~I~l~~~V~~I~~~~-~g~v~~V~~~--~g~--~~~a-d~VI~a~p~~~~~~l 194 (390)
+.+.+|++++.|++|..++ ++++++|++. +|+ ++.| +.||+++..-...+|
T Consensus 218 r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~l 274 (577)
T 3q9t_A 218 KPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKL 274 (577)
T ss_dssp CTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHH
T ss_pred CCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHH
Confidence 4578999999999999863 4668888875 354 4567 569998876444444
No 240
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=71.57 E-value=3 Score=40.50 Aligned_cols=46 Identities=17% Similarity=0.211 Sum_probs=36.3
Q ss_pred HHHHHHHcCcEEEc--CceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 138 IVEHIQSLGGEVRL--NSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 138 l~~~l~~~G~~I~l--~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
..+.|.+.++++.. +++|++|.. +| |.+.|| .+++|.||+|+....
T Consensus 344 y~~al~~~nV~lv~~~~~~I~~it~--~g----v~~~dG-~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 344 YYETYNRDNVHLVDIREAPIQEVTP--EG----IKTADA-AYDLDVIIYATGFDA 391 (545)
T ss_dssp HHHHTTSTTEEEEETTTSCEEEEET--TE----EEESSC-EEECSEEEECCCCBS
T ss_pred HHHHhcCCCEEEEecCCCCceEEcc--Ce----EEeCCC-eeecCEEEECCcccc
Confidence 34555566788886 899999974 34 678899 899999999999875
No 241
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=70.46 E-value=6.9 Score=35.94 Aligned_cols=41 Identities=24% Similarity=0.152 Sum_probs=32.4
Q ss_pred CCCCCCeEEecccccC-CCCCchhHHHHHHHHHHHHHHHHhh
Q 016397 333 RSPVEGFYLAGDYTKQ-KYLASMEGAVLSGKLCAQAIVQDYV 373 (390)
Q Consensus 333 ~~~~~~l~~aGd~~~~-~~~~~~~gA~~SG~~aA~~il~~~~ 373 (390)
.+..+|||.+||-+.. ..|.+...|..+|..+|+.|++.+.
T Consensus 283 ~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~ 324 (401)
T 3vrd_B 283 SSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLK 324 (401)
T ss_dssp BSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 3567999999998753 2344667899999999999998763
No 242
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=69.48 E-value=2.2 Score=41.48 Aligned_cols=43 Identities=21% Similarity=0.317 Sum_probs=34.0
Q ss_pred HHcCcEEEc--CceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhH
Q 016397 143 QSLGGEVRL--NSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 191 (390)
Q Consensus 143 ~~~G~~I~l--~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~ 191 (390)
.+.++++.. +++|++|.. +| |.++||+.+++|.||+|+.....
T Consensus 341 ~~~nV~lv~~~~~~I~~it~--~g----v~~~dG~~~~~DvIV~ATGf~~~ 385 (540)
T 3gwf_A 341 NRPNVEAVAIKENPIREVTA--KG----VVTEDGVLHELDVLVFATGFDAV 385 (540)
T ss_dssp GSTTEEEEETTTSCEEEECS--SE----EEETTCCEEECSEEEECCCBSCS
T ss_pred cCCCEEEEeCCCCCccEEec--Ce----EEcCCCCEEECCEEEECCccCcc
Confidence 455788876 789999874 34 67889999999999999987543
No 243
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=69.40 E-value=4.8 Score=37.83 Aligned_cols=48 Identities=21% Similarity=0.242 Sum_probs=34.0
Q ss_pred HHHHHHcCcEEEcCceeeEEEECCCCCEEEEEE-cCCe--EEEcCEEEEecCh
Q 016397 139 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPV 188 (390)
Q Consensus 139 ~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~-~~g~--~~~ad~VI~a~p~ 188 (390)
.+.+++.|+++++++.|+.|..+ ++.+ .+.. .+|+ ++++|++|+|+..
T Consensus 63 ~~~~~~~gv~~~~~~~v~~i~~~-~~~v-~~~~~~~g~~~~~~~d~lviAtG~ 113 (447)
T 1nhp_A 63 GEKMESRGVNVFSNTEITAIQPK-EHQV-TVKDLVSGEERVENYDKLIISPGA 113 (447)
T ss_dssp HHHHHHTTCEEEETEEEEEEETT-TTEE-EEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHCCCEEEECCEEEEEeCC-CCEE-EEEecCCCceEEEeCCEEEEcCCC
Confidence 34455679999999999999874 3433 2332 2364 4899999999875
No 244
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=69.28 E-value=5 Score=38.14 Aligned_cols=42 Identities=19% Similarity=0.213 Sum_probs=31.7
Q ss_pred cCcEEEcCceeeEEEECCCCCEEEEEE-cCCe--EEEcCEEEEecCh
Q 016397 145 LGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPV 188 (390)
Q Consensus 145 ~G~~I~l~~~V~~I~~~~~g~v~~V~~-~~g~--~~~ad~VI~a~p~ 188 (390)
.|.+++++++|+.|..+ ++.+ .+.. .+|+ ++.+|.||+|+..
T Consensus 106 ~gv~~~~~~~v~~i~~~-~~~v-~v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 106 YGIDAKVRHEVTKVDTE-KKIV-YAEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp TCCEEESSEEEEEEETT-TTEE-EEEETTTCCEEEEECSEEEECCCE
T ss_pred cCCEEEeCCEEEEEECC-CCEE-EEEEcCCCceEEEEcCEEEECCCC
Confidence 48999999999999874 3434 2433 3465 7899999999875
No 245
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=68.68 E-value=5.4 Score=38.00 Aligned_cols=46 Identities=35% Similarity=0.463 Sum_probs=34.0
Q ss_pred HHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc-CC--eEEEcCEEEEecCh
Q 016397 139 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NG--NVIDGDAYVFATPV 188 (390)
Q Consensus 139 ~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~-~g--~~~~ad~VI~a~p~ 188 (390)
.+.+++.|++++++++|+.|..+ ++. |++. +| +++++|+||+|+..
T Consensus 99 ~~~~~~~gv~v~~~~~v~~i~~~-~~~---v~v~~~g~~~~~~~d~lviAtG~ 147 (490)
T 2bc0_A 99 KEELESLGAKVYMESPVQSIDYD-AKT---VTALVDGKNHVETYDKLIFATGS 147 (490)
T ss_dssp HHHHHHTTCEEETTCCEEEEETT-TTE---EEEEETTEEEEEECSEEEECCCE
T ss_pred HHHHHhCCCEEEeCCEEEEEECC-CCE---EEEEeCCcEEEEECCEEEECCCC
Confidence 34455679999999999999874 343 3443 43 57899999999875
No 246
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=68.25 E-value=7.2 Score=37.32 Aligned_cols=56 Identities=11% Similarity=-0.078 Sum_probs=36.8
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCC------CEEEEEEcCC-----eEEEcCEEEEecCh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDG------TVKNFLLTNG-----NVIDGDAYVFATPV 188 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g------~v~~V~~~~g-----~~~~ad~VI~a~p~ 188 (390)
.+.+-|....+..+..|+++++|++|+..+++ ....|++.++ +++.|+.||++++.
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 34444444444456679999999999875432 1124666543 36889999999874
No 247
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=66.81 E-value=6.4 Score=38.47 Aligned_cols=51 Identities=16% Similarity=0.167 Sum_probs=36.1
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEE-cCCe--EEEcCEEEEecCh
Q 016397 136 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPV 188 (390)
Q Consensus 136 ~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~-~~g~--~~~ad~VI~a~p~ 188 (390)
..+....+..|.+++++++|++|..+ ++.+ .+.. .+|+ .+.+|+||+|+..
T Consensus 97 ~~~~~~~~~~gi~v~~~~~V~~id~~-~~~v-~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 97 QTVERMSKRFNLDIRVLSEVVKINKE-EKTI-TIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp SCHHHHHHHTTCEEECSEEEEEEETT-TTEE-EEEETTTCCEEEEECSEEEECCCE
T ss_pred cCHHHHHHhcCcEEEECCEEEEEECC-CCEE-EEeecCCCCEEEEeCCEEEECCCC
Confidence 33444445679999999999999974 4434 2332 3465 6889999999875
No 248
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=66.55 E-value=12 Score=39.27 Aligned_cols=50 Identities=16% Similarity=0.092 Sum_probs=36.8
Q ss_pred HHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc------CC---------eEEEcCEEEEecCh
Q 016397 138 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT------NG---------NVIDGDAYVFATPV 188 (390)
Q Consensus 138 l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~------~g---------~~~~ad~VI~a~p~ 188 (390)
..+.+++.|+++++++.|++|..+ ++++++|++. +| .++.+|.||+|+..
T Consensus 376 e~~~~~~~Gv~~~~~~~~~~i~~~-~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 376 EVELAKEEKCEFLPFLSPRKVIVK-GGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEE-TTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHHcCCEEEeCCCceEEEcc-CCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 345667889999999999999873 5666556542 22 36889999999854
No 249
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=66.53 E-value=6.3 Score=37.06 Aligned_cols=48 Identities=15% Similarity=0.189 Sum_probs=35.1
Q ss_pred HHHHHHcCcEEEcCceeeEEEECCCCCEEEEEE-cCCeEEEcCEEEEecCh
Q 016397 139 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGNVIDGDAYVFATPV 188 (390)
Q Consensus 139 ~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~-~~g~~~~ad~VI~a~p~ 188 (390)
.+.+++.|.+++++++|++|..+ ++.+ .+.. .+++++.+|.+|+|+..
T Consensus 65 ~~~~~~~gi~~~~~~~V~~id~~-~~~v-~v~~~~~~~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 65 EEELRRQKIQLLLNREVVAMDVE-NQLI-AWTRKEEQQWYSYDKLILATGA 113 (452)
T ss_dssp HHHHHHTTEEEECSCEEEEEETT-TTEE-EEEETTEEEEEECSEEEECCCC
T ss_pred HHHHHHCCCEEEECCEEEEEECC-CCEE-EEEecCceEEEEcCEEEECCCc
Confidence 34556679999999999999974 3433 2431 24567899999999876
No 250
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=65.54 E-value=6.6 Score=36.90 Aligned_cols=48 Identities=17% Similarity=0.263 Sum_probs=34.0
Q ss_pred HHHHHHcCcEEEcCceeeEEEECCCCCEEEEEE-cC--CeEEEcCEEEEecCh
Q 016397 139 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TN--GNVIDGDAYVFATPV 188 (390)
Q Consensus 139 ~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~-~~--g~~~~ad~VI~a~p~ 188 (390)
.+.+++.|.+++++++|+.|..+ ++.+ .+.. .+ ++++++|.+|+|+..
T Consensus 65 ~~~~~~~gv~~~~~~~v~~i~~~-~~~v-~v~~~~~g~~~~~~~d~lviAtGs 115 (452)
T 2cdu_A 65 PEELSNLGANVQMRHQVTNVDPE-TKTI-KVKDLITNEEKTEAYDKLIMTTGS 115 (452)
T ss_dssp HHHHHHTTCEEEESEEEEEEEGG-GTEE-EEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHcCCEEEeCCEEEEEEcC-CCEE-EEEecCCCceEEEECCEEEEccCC
Confidence 34455679999999999999874 3433 2332 12 457899999999875
No 251
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=65.01 E-value=6.6 Score=38.07 Aligned_cols=44 Identities=18% Similarity=0.191 Sum_probs=32.0
Q ss_pred HHcCcEEEcCceeeEEEECCCCCEEEEEE-cCCe--EEEcCEEEEecCh
Q 016397 143 QSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPV 188 (390)
Q Consensus 143 ~~~G~~I~l~~~V~~I~~~~~g~v~~V~~-~~g~--~~~ad~VI~a~p~ 188 (390)
+..|.+++++++|++|..+ ++.++ +.. .+|+ ++.+|+||+|+..
T Consensus 69 ~~~~i~~~~~~~V~~id~~-~~~v~-~~~~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 69 ARFNVEVRVKHEVVAIDRA-AKLVT-VRRLLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp HHHCCEEETTEEEEEEETT-TTEEE-EEETTTCCEEEEECSEEEECCCE
T ss_pred HhcCcEEEECCEEEEEECC-CCEEE-EEecCCCCeEEEECCEEEECCCC
Confidence 3468999999999999974 34332 332 2353 7899999999876
No 252
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=64.89 E-value=14 Score=32.37 Aligned_cols=54 Identities=9% Similarity=0.265 Sum_probs=38.1
Q ss_pred cchHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 133 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 133 ~l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
.+.+.+.+.++..+.++..++ |..+..+.+. . .+.+.++.++.+|.||+|+...
T Consensus 67 ~l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~-~-~~~~~~~~~~~~~~liiATG~~ 120 (314)
T 4a5l_A 67 ELMMNMRTQSEKYGTTIITET-IDHVDFSTQP-F-KLFTEEGKEVLTKSVIIATGAT 120 (314)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEECSSSS-E-EEEETTCCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHhhcCcEEEEeE-EEEeecCCCc-e-EEEECCCeEEEEeEEEEccccc
Confidence 456667777777888877654 5556554333 3 3667778899999999999863
No 253
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=64.89 E-value=4.7 Score=37.90 Aligned_cols=42 Identities=21% Similarity=0.275 Sum_probs=33.1
Q ss_pred HHcCcEEEcCceeeEEEECCCCCEEEEEEcCC-eEEEcCEEEEecCh
Q 016397 143 QSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-NVIDGDAYVFATPV 188 (390)
Q Consensus 143 ~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g-~~~~ad~VI~a~p~ 188 (390)
++.|.+++++++|++|..+ ++ .|.+.+| .++.+|+||+|+..
T Consensus 70 ~~~gi~v~~~~~v~~i~~~--~~--~v~~~~g~~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 70 KKRGIDLHLNAEVIEVDTG--YV--RVRENGGEKSYEWDYLVFANGA 112 (449)
T ss_dssp HHTTCEEETTCEEEEECSS--EE--EEECSSSEEEEECSEEEECCCE
T ss_pred HhcCcEEEecCEEEEEecC--CC--EEEECCceEEEEcCEEEECCCC
Confidence 4678999999999999753 32 3667666 47899999999875
No 254
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=63.47 E-value=4.8 Score=40.66 Aligned_cols=49 Identities=18% Similarity=0.176 Sum_probs=35.8
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEE--cCC-eE------------------EEcCEEEEecCh
Q 016397 136 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNG-NV------------------IDGDAYVFATPV 188 (390)
Q Consensus 136 ~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~--~~g-~~------------------~~ad~VI~a~p~ 188 (390)
..+.+.+++.|++|++++.|++|.. ++ ++ ++. .++ +. +.+|.||+++..
T Consensus 575 ~~~~~~l~~~GV~i~~~~~v~~i~~--~~-v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~ 644 (729)
T 1o94_A 575 PNMMRRLHELHVEELGDHFCSRIEP--GR-ME-IYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGR 644 (729)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEET--TE-EE-EEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCE
T ss_pred HHHHHHHHhCCCEEEcCcEEEEEEC--Ce-EE-EEEecCCceEEecccccccccccCCcceeeeCCEEEECCCC
Confidence 5566778889999999999999974 33 31 332 233 22 899999999875
No 255
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=63.30 E-value=9.4 Score=35.54 Aligned_cols=45 Identities=18% Similarity=0.186 Sum_probs=34.0
Q ss_pred HHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChh
Q 016397 140 EHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 189 (390)
Q Consensus 140 ~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 189 (390)
+.+++.|++++.+ .|+.|..+ ++ .|++.+|+++.+|.+|+|+...
T Consensus 64 ~~~~~~gv~~~~~-~v~~id~~-~~---~v~~~~g~~i~~d~liiAtG~~ 108 (430)
T 3h28_A 64 PLLPKFNIEFINE-KAESIDPD-AN---TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp TTGGGGTEEEECS-CEEEEETT-TT---EEEETTCCEEECSEEEECCCCE
T ss_pred HHHHhcCCEEEEE-EEEEEECC-CC---EEEECCCcEEECCEEEEcCCcc
Confidence 3445568999875 89999863 33 2678888889999999998653
No 256
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=63.29 E-value=3.9 Score=38.74 Aligned_cols=48 Identities=19% Similarity=0.162 Sum_probs=33.6
Q ss_pred HHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEc------------------CC--eEEEcCEEEEecCh
Q 016397 139 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT------------------NG--NVIDGDAYVFATPV 188 (390)
Q Consensus 139 ~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~------------------~g--~~~~ad~VI~a~p~ 188 (390)
.+.+++.|+++++++.|++|.. +|++++|++. +| .++.+|.||+|+..
T Consensus 309 ~~~~~~~Gv~~~~~~~~~~i~~--~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~ 376 (456)
T 2vdc_G 309 VAHAEEEGVEFIWQAAPEGFTG--DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGF 376 (456)
T ss_dssp HHHHHHTTCEEECCSSSCCEEE--EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHCCCEEEeCCCceEEeC--CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCC
Confidence 3456778999999999999975 3433222221 23 36889999999875
No 257
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=60.98 E-value=11 Score=35.42 Aligned_cols=38 Identities=26% Similarity=0.290 Sum_probs=31.1
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.+++..+|||.+||-... +.....|+.+|+.||+.|+.
T Consensus 296 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 296 YMRTNVGHIYAIGDVNGL--LQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp TSBCSSTTEEECGGGGCS--SCSHHHHHHHHHHHHHHHHT
T ss_pred CCccCCCCEEEeECcCCC--ccCHHHHHHHHHHHHHHhcC
Confidence 356778999999998764 24677899999999999975
No 258
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=60.91 E-value=9.2 Score=36.44 Aligned_cols=38 Identities=21% Similarity=0.333 Sum_probs=31.5
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.+++..+|||.+||.+.. +.....|+..|+.||..|+.
T Consensus 300 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 300 TLQTSVDHIFVAGDANNT--LTLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp TCBCSSTTEEECGGGGTS--SCSHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEEecCCC--CccHHHHHHHHHHHHHHHcC
Confidence 456778999999998865 25677999999999999986
No 259
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=60.77 E-value=7.8 Score=36.39 Aligned_cols=38 Identities=16% Similarity=0.474 Sum_probs=29.1
Q ss_pred CCCCCeEEecccccCC-CCC--chhHHHHHHHHHHHHHHHH
Q 016397 334 SPVEGFYLAGDYTKQK-YLA--SMEGAVLSGKLCAQAIVQD 371 (390)
Q Consensus 334 ~~~~~l~~aGd~~~~~-~~~--~~~gA~~SG~~aA~~il~~ 371 (390)
++++|||+||+-+... +.+ .+..|+.+|+.|++.+.+.
T Consensus 402 ~~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~ 442 (447)
T 2i0z_A 402 KFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGEN 442 (447)
T ss_dssp SSSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 4689999999977632 223 4678999999999987654
No 260
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=60.63 E-value=9 Score=35.98 Aligned_cols=37 Identities=30% Similarity=0.366 Sum_probs=30.2
Q ss_pred CCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 332 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 332 ~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
+++..+|||.+||-... +.....|+..|+.||+.|..
T Consensus 296 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 332 (455)
T 1ebd_A 296 CRTSVPNIFAIGDIVPG--PALAHKASYEGKVAAEAIAG 332 (455)
T ss_dssp CBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTS
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHHcC
Confidence 45678999999998764 24667899999999999874
No 261
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=59.34 E-value=9.9 Score=35.88 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=31.6
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.+++..+|||.+||.... |.....|+..|+.||+.|+.
T Consensus 295 ~~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 332 (466)
T 3l8k_A 295 TMKTNIPNVFATGDANGL--APYYHAAVRMSIAAANNIMA 332 (466)
T ss_dssp TCBCSSTTEEECGGGTCS--CCSHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCCEEEEEecCCC--CccHhHHHHHHHHHHHHHhC
Confidence 355678999999998865 35778899999999999974
No 262
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=59.06 E-value=9.7 Score=35.86 Aligned_cols=38 Identities=18% Similarity=0.273 Sum_probs=31.3
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
..++..+|||.+||-... +.....|+..|+.||+.|+.
T Consensus 293 ~~~t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 330 (463)
T 4dna_A 293 FSRTSTPGIYALGDVTDR--VQLTPVAIHEAMCFIETEYK 330 (463)
T ss_dssp TCBCSSTTEEECSGGGSS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCCEEEEEecCCC--CCChHHHHHHHHHHHHHHcC
Confidence 456778999999998764 25678899999999999975
No 263
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=58.66 E-value=10 Score=36.36 Aligned_cols=50 Identities=16% Similarity=0.153 Sum_probs=36.8
Q ss_pred cCcEEEcCceeeEEEECCCCCEEEEEEcCC---eEEEcCEEEEecChhhHhhhc
Q 016397 145 LGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYVFATPVDILKLQL 195 (390)
Q Consensus 145 ~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g---~~~~ad~VI~a~p~~~~~~ll 195 (390)
.+.+|.+++.|++|..+ ++++++|++.+. ..+.++.||++...-...+||
T Consensus 224 ~nl~v~~~~~v~~i~~~-~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LL 276 (526)
T 3t37_A 224 KNLTILTGSRVRRLKLE-GNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALL 276 (526)
T ss_dssp TTEEEECSCEEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHH
T ss_pred CCeEEEeCCEEEEEEec-CCeEEEEEEEecCceEEEeecceEEcccccCCcchh
Confidence 45799999999999985 566777776432 356789999988765445553
No 264
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=58.53 E-value=11 Score=35.66 Aligned_cols=38 Identities=24% Similarity=0.290 Sum_probs=31.2
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.+++..+|||.+||-... |.....|+..|+.||+.|..
T Consensus 305 ~~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 342 (476)
T 3lad_A 305 YCATSVPGVYAIGDVVRG--AMLAHKASEEGVVVAERIAG 342 (476)
T ss_dssp TSBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCEEEEEccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 356778999999998853 25778899999999999975
No 265
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=58.53 E-value=10 Score=35.88 Aligned_cols=39 Identities=23% Similarity=0.357 Sum_probs=31.5
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 371 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~ 371 (390)
..++..+|||.+||-... |.....|+..|+.||+.|+..
T Consensus 318 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 318 FQNTNVKGIYAVGDVCGK--ALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp TCBCSSTTEEECGGGGCS--SCCHHHHHHHHHHHHHHHHSC
T ss_pred CcccCCCCEEEEEecCCC--CccHhHHHHHHHHHHHHHcCC
Confidence 356778999999998843 357788999999999998753
No 266
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=56.45 E-value=12 Score=35.61 Aligned_cols=38 Identities=13% Similarity=0.139 Sum_probs=31.3
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
..++..+|||.+||-... +.....|+..|+.+|+.|+.
T Consensus 313 ~~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 350 (484)
T 3o0h_A 313 KMTTNVSHIWAVGDVTGH--IQLTPVAIHDAMCFVKNAFE 350 (484)
T ss_dssp TSBCSSTTEEECGGGGTS--CCCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCEEEEEecCCC--CcCHHHHHHHHHHHHHHHcC
Confidence 455778999999998763 25678899999999999875
No 267
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=56.21 E-value=10 Score=36.08 Aligned_cols=38 Identities=21% Similarity=0.236 Sum_probs=31.4
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.+++..+|||.+||-... |.....|+..|+.||+.|+.
T Consensus 325 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 325 HFQTSIAGVYAIGDVVRG--PMLAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp TCBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCEEEEEecCCC--ccchhHHHHHHHHHHHHHcC
Confidence 456778999999998754 35788999999999999874
No 268
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=55.90 E-value=6.9 Score=37.98 Aligned_cols=43 Identities=21% Similarity=0.206 Sum_probs=33.1
Q ss_pred HHHcCcEEE--cCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhH
Q 016397 142 IQSLGGEVR--LNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 191 (390)
Q Consensus 142 l~~~G~~I~--l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~ 191 (390)
|.+.++++. ..++|++|.. +| |.+.+| .+++|.||+|+.....
T Consensus 353 l~~~~V~lvd~~~~~I~~it~--~g----v~~~dG-~~~~D~iI~ATGf~~~ 397 (549)
T 4ap3_A 353 YNRDNVELVDLRSTPIVGMDE--TG----IVTTGA-HYDLDMIVLATGFDAM 397 (549)
T ss_dssp GGSTTEEEEETTTSCEEEEET--TE----EEESSC-EEECSEEEECCCEEES
T ss_pred hcCCCEEEEeCCCCCceEEeC--Cc----EEeCCC-ceecCEEEECCccccc
Confidence 345577877 3689999974 34 678899 8999999999987643
No 269
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=55.84 E-value=9.7 Score=35.97 Aligned_cols=43 Identities=21% Similarity=0.209 Sum_probs=29.7
Q ss_pred HcCcEEEcCceeeEEEECCCCCEEEEEE-cCCe--EEEcCEEEEecCh
Q 016397 144 SLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPV 188 (390)
Q Consensus 144 ~~G~~I~l~~~V~~I~~~~~g~v~~V~~-~~g~--~~~ad~VI~a~p~ 188 (390)
..|.+++++++|++|..+ ++.+ .+.. .+|+ .+.+|++|+|+..
T Consensus 78 ~~gi~~~~~~~V~~id~~-~~~v-~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 78 NKDVEALVETRAHAIDRA-AHTV-EIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp ---CEEECSEEEEEEETT-TTEE-EEEETTTCCEEEEECSEEEECCCE
T ss_pred hcCcEEEECCEEEEEECC-CCEE-EEeecCCCCEEEEECCEEEEeCCC
Confidence 358899999999999974 3433 2332 2354 7899999999875
No 270
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=55.52 E-value=13 Score=35.12 Aligned_cols=38 Identities=16% Similarity=0.024 Sum_probs=31.2
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.+++..+|||.+||-... +.....|+..|+.||+.|+.
T Consensus 312 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 312 QFNSKFPHIKVVGDVTFG--PMLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp TSBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEeeccCCC--cccHHHHHHHHHHHHHHHcC
Confidence 355678999999998864 24677899999999999986
No 271
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=54.94 E-value=13 Score=35.28 Aligned_cols=39 Identities=26% Similarity=0.295 Sum_probs=31.4
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
..++..+|||.+||-+.+ .|.....|+..|+.||+.|+.
T Consensus 313 ~~~t~~~~IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~g 351 (483)
T 3dgh_A 313 QEATNVANIYAVGDIIYG-KPELTPVAVLAGRLLARRLYG 351 (483)
T ss_dssp TCBCSSTTEEECSTTBTT-SCCCHHHHHHHHHHHHHHHHS
T ss_pred CCccCCCCEEEEEcccCC-CCccHHHHHHHHHHHHHHHcC
Confidence 456778999999998743 235778899999999999874
No 272
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=54.92 E-value=13 Score=35.09 Aligned_cols=37 Identities=22% Similarity=0.275 Sum_probs=30.3
Q ss_pred CCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 332 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 332 ~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
+++..+|||.+||.... +.....|+.+|+.||+.|+.
T Consensus 305 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 305 FSTNVSGVYAIGDVIPG--PMLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp CBCSSTTEEECSTTSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CccCCCCEEEEeccCCC--CccHHHHHHHHHHHHHHHcC
Confidence 45678999999998764 24667899999999999874
No 273
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=54.70 E-value=14 Score=33.74 Aligned_cols=43 Identities=14% Similarity=0.140 Sum_probs=33.1
Q ss_pred HHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 141 HIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 141 ~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
.+++.|.+++++++|+.|..+ +. . |++. ++++.+|++|+|+..
T Consensus 69 ~~~~~~v~~~~~~~v~~i~~~-~~-~--v~~~-~~~~~~d~lviAtG~ 111 (384)
T 2v3a_A 69 MAEQLNARILTHTRVTGIDPG-HQ-R--IWIG-EEEVRYRDLVLAWGA 111 (384)
T ss_dssp HHHHTTCEEECSCCCCEEEGG-GT-E--EEET-TEEEECSEEEECCCE
T ss_pred HHHhCCcEEEeCCEEEEEECC-CC-E--EEEC-CcEEECCEEEEeCCC
Confidence 345678999999999999874 33 2 5664 457999999999875
No 274
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=54.60 E-value=14 Score=35.16 Aligned_cols=39 Identities=26% Similarity=0.305 Sum_probs=31.3
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.+++..+|||.+||-+.+ .|.....|+..|+.||+.|+.
T Consensus 313 ~~~t~~~~IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~g 351 (488)
T 3dgz_A 313 QEATSVPHIYAIGDVAEG-RPELTPTAIKAGKLLAQRLFG 351 (488)
T ss_dssp TSBCSSTTEEECGGGBTT-CCCCHHHHHHHHHHHHHHHHS
T ss_pred CCccCCCCEEEeEEecCC-CCcchhHHHHHHHHHHHHHcC
Confidence 456778999999998743 235678899999999999874
No 275
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=54.28 E-value=13 Score=34.90 Aligned_cols=38 Identities=26% Similarity=0.423 Sum_probs=31.0
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
..++..+|||.+||-... +.....|+..|+.+|+.|+.
T Consensus 290 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 290 YQNTNIEGIYAVGDNTGA--VELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp TSBCSSTTEEECSGGGTS--CCCHHHHHHHHHHHHHHHHT
T ss_pred CCccCCCCEEEEeccCCC--CccHHHHHHHHHHHHHHHcC
Confidence 345778999999998754 25678899999999999875
No 276
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=54.21 E-value=13 Score=35.15 Aligned_cols=38 Identities=18% Similarity=0.287 Sum_probs=30.9
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.+++..+|||.+||-... +.....|+..|+.||+.|+.
T Consensus 309 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 309 YQNTNVPNIYSLGDVVGK--VELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp TCBCSSTTEEECGGGTTS--SCCHHHHHHHHHHHHHHHHS
T ss_pred CCccCCCCEEEEEecCCC--cccHHHHHHHHHHHHHHhcC
Confidence 346678999999998653 35678899999999999874
No 277
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=53.69 E-value=13 Score=39.16 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=33.7
Q ss_pred CCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 016397 332 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 373 (390)
Q Consensus 332 ~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~ 373 (390)
.+|..+|||.+||-... +..+..|+..|+.||..|...+.
T Consensus 469 ~~Ts~~~VfA~GD~~~~--~~~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 469 MQTSEPWVFAGGDIVGM--ANTTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp CBCSSTTEEECSGGGCS--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeCCCCCC--chHHHHHHHHHHHHHHHHHHHHH
Confidence 55778999999998864 35788899999999999998765
No 278
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=53.46 E-value=11 Score=34.72 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=32.0
Q ss_pred CCCCCCCCeEEecccccCCC--CCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKY--LASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~--~~~~~gA~~SG~~aA~~il~ 370 (390)
.+++..++||.+||...... +..+..|+.+|+.||..|+.
T Consensus 252 ~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g 293 (385)
T 3klj_A 252 HMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACG 293 (385)
T ss_dssp TCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTT
T ss_pred CcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcC
Confidence 35677899999999886321 35778899999999999975
No 279
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=52.99 E-value=11 Score=35.83 Aligned_cols=36 Identities=25% Similarity=0.409 Sum_probs=30.6
Q ss_pred CCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 016397 335 PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 373 (390)
Q Consensus 335 ~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~ 373 (390)
..++||.+||-... ..+..|+..|+.||..|...++
T Consensus 342 s~~~vya~GD~~~~---~~~~~A~~~g~~aa~~i~~~lg 377 (493)
T 1y56_A 342 IKDGIYVAGSAVSI---KPHYANYLEGKLVGAYILKEFG 377 (493)
T ss_dssp EETTEEECSTTTCC---CCHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCEEEEeccCCc---cCHHHHHHHHHHHHHHHHHHcC
Confidence 46799999998765 4678899999999999998775
No 280
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=52.41 E-value=12 Score=33.65 Aligned_cols=38 Identities=24% Similarity=0.360 Sum_probs=29.1
Q ss_pred CCCeEEeccccc---CCC--CCchhHHHHHHHHHHHHHHHHhh
Q 016397 336 VEGFYLAGDYTK---QKY--LASMEGAVLSGKLCAQAIVQDYV 373 (390)
Q Consensus 336 ~~~l~~aGd~~~---~~~--~~~~~gA~~SG~~aA~~il~~~~ 373 (390)
++|||++|.... +.. ...+.+-+.||++||+.|++++.
T Consensus 283 ~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 283 VDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp STTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 689999997652 211 13578899999999999998874
No 281
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=52.38 E-value=15 Score=35.28 Aligned_cols=39 Identities=26% Similarity=0.338 Sum_probs=31.2
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.++|..+|||.+||-+.+. +.....|+..|+.||+.|+.
T Consensus 341 ~~~Ts~~~IyA~GD~~~g~-~~~~~~A~~~g~~aa~~i~g 379 (519)
T 3qfa_A 341 EEQTNVPYIYAIGDILEDK-VELTPVAIQAGRLLAQRLYA 379 (519)
T ss_dssp TSBCSSTTEEECGGGBSSS-CCCHHHHHHHHHHHHHHHHS
T ss_pred CCccCCCCEEEEEeccCCC-CccHHHHHHHHHHHHHHHcC
Confidence 3567789999999987432 35778899999999999874
No 282
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=51.91 E-value=10 Score=35.02 Aligned_cols=35 Identities=29% Similarity=0.488 Sum_probs=26.8
Q ss_pred CCCCCeEEecccccCC-CCC--chhHHHHHHHHHHHHH
Q 016397 334 SPVEGFYLAGDYTKQK-YLA--SMEGAVLSGKLCAQAI 368 (390)
Q Consensus 334 ~~~~~l~~aGd~~~~~-~~~--~~~gA~~SG~~aA~~i 368 (390)
+.++||||||+-++.. +.+ .+..|..||+.|++.+
T Consensus 361 ~~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~ 398 (401)
T 2gqf_A 361 NQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSI 398 (401)
T ss_dssp SSSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHH
Confidence 4579999999977643 223 3677999999999876
No 283
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=51.78 E-value=22 Score=33.14 Aligned_cols=41 Identities=20% Similarity=0.223 Sum_probs=31.0
Q ss_pred CCCCCCCCCeEEecccccCC--------CCCchhHHHHHHHHHHHHHHH
Q 016397 330 PLQRSPVEGFYLAGDYTKQK--------YLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 330 ~~~~~~~~~l~~aGd~~~~~--------~~~~~~gA~~SG~~aA~~il~ 370 (390)
..++|..+|||.+||-+... ++.....|...|+.+|+.|..
T Consensus 262 ~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g 310 (437)
T 4eqs_A 262 DKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAG 310 (437)
T ss_dssp TTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHS
T ss_pred CCccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcC
Confidence 34667889999999986532 123467799999999999874
No 284
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=51.49 E-value=16 Score=34.82 Aligned_cols=38 Identities=24% Similarity=0.348 Sum_probs=31.1
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.+++..+|||.+||-... +.....|+..|+.||+.|+.
T Consensus 317 ~~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 317 FSRTNVPNIYAIGDITDR--LMLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp TCBCSSTTEEECGGGGCS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CCccCCCCEEEEeccCCC--ccCHHHHHHHHHHHHHHhcC
Confidence 356678999999998853 25678899999999999874
No 285
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=51.43 E-value=16 Score=34.74 Aligned_cols=38 Identities=18% Similarity=0.331 Sum_probs=31.2
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.+++..+|||.+||-... +.....|+..|+.||+.|+.
T Consensus 313 ~~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 313 YSKTNVDNIYAIGDVTDR--VMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp TCBCSSTTEEECGGGGCS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CCccCCCCEEEEeccCCC--ccCHHHHHHHHHHHHHHhcC
Confidence 356778999999998853 35778999999999999874
No 286
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=51.36 E-value=13 Score=34.97 Aligned_cols=38 Identities=16% Similarity=0.257 Sum_probs=31.0
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.+++..++||.+||-... +.....|+..|+.||+.|+.
T Consensus 307 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 307 RFQTKIPNIYAIGDVVAG--PMLAHKAEDEGIICVEGMAG 344 (474)
T ss_dssp TCBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CCccCCCCEEEeeecCCC--CccHHHHHHHHHHHHHHhcC
Confidence 355778999999998764 35678899999999999975
No 287
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=50.66 E-value=16 Score=34.32 Aligned_cols=37 Identities=27% Similarity=0.359 Sum_probs=30.3
Q ss_pred CCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 332 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 332 ~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.++..+|||.+||.... +.....|+.+|+.+|+.|+.
T Consensus 290 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 290 QNTNVPGVYALGDITGR--DQLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp SBCSSTTEEECGGGGTS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEeecCCC--cccHHHHHHHHHHHHHHHcC
Confidence 45678999999998754 25678899999999999874
No 288
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=50.10 E-value=7.4 Score=37.95 Aligned_cols=38 Identities=24% Similarity=0.453 Sum_probs=29.5
Q ss_pred CCCCCeEEecccccCC----CCC--chhHHHHHHHHHHHHHHHH
Q 016397 334 SPVEGFYLAGDYTKQK----YLA--SMEGAVLSGKLCAQAIVQD 371 (390)
Q Consensus 334 ~~~~~l~~aGd~~~~~----~~~--~~~gA~~SG~~aA~~il~~ 371 (390)
++++|||-||+-+.+- |++ ++-.|+..|++|++.+.+.
T Consensus 525 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~ 568 (572)
T 1d4d_A 525 KPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKF 568 (572)
T ss_dssp SEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 7899999999976432 332 5778999999999988653
No 289
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=49.76 E-value=14 Score=34.69 Aligned_cols=39 Identities=18% Similarity=0.217 Sum_probs=31.2
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.+++..+|||.+||-... ++.....|+..|+.||+.|+.
T Consensus 301 ~~~t~~~~IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 301 HFETSIPDVYAIGDVVDK-GPMLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp TSBCSSTTEEECGGGBSS-SCSCHHHHHHHHHHHHHHHTT
T ss_pred CcccCCCCEEEeeccCCC-CCccHhHHHHHHHHHHHHHcC
Confidence 356778999999998872 235678899999999999874
No 290
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=48.96 E-value=15 Score=34.79 Aligned_cols=38 Identities=26% Similarity=0.283 Sum_probs=30.9
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.+++..+|||.+||-... +.....|+..|+.||+.|+.
T Consensus 311 ~~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 311 QMRTNVPHIYAIGDIVGQ--PMLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp TSBCSSTTEEECGGGTCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred CcccCCCCEEEEEcccCC--CccHHHHHHHHHHHHHHHcC
Confidence 356678999999998864 24678899999999999874
No 291
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=48.35 E-value=19 Score=35.08 Aligned_cols=38 Identities=21% Similarity=0.329 Sum_probs=30.8
Q ss_pred CCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 332 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 332 ~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
++|..+|||.+||-..+. +.....|+..|+.||+.|+.
T Consensus 421 ~~ts~~~VyA~GD~~~~~-~~~~~~A~~~g~~aa~~i~~ 458 (598)
T 2x8g_A 421 EQTTVSNVYAIGDINAGK-PQLTPVAIQAGRYLARRLFA 458 (598)
T ss_dssp SBCSSTTEEECGGGBTTS-CCCHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeeecCCC-CccHHHHHHhHHHHHHHHhc
Confidence 467789999999985432 35678899999999999975
No 292
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=48.21 E-value=16 Score=34.40 Aligned_cols=38 Identities=21% Similarity=0.279 Sum_probs=30.8
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.+++..+|||.+||-... +.....|+..|+.||+.|+.
T Consensus 296 ~~~t~~~~Iya~GD~~~~--~~l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 296 RMETSVPGVYAIGDAARP--PLLAHKAMREGLIAAENAAG 333 (464)
T ss_dssp TCBCSSTTEEECGGGTCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred CcccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 355678999999998764 35677899999999999874
No 293
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=47.54 E-value=10 Score=36.87 Aligned_cols=39 Identities=21% Similarity=0.509 Sum_probs=29.8
Q ss_pred CCCCCCeEEecccccCC----CCC--chhHHHHHHHHHHHHHHHH
Q 016397 333 RSPVEGFYLAGDYTKQK----YLA--SMEGAVLSGKLCAQAIVQD 371 (390)
Q Consensus 333 ~~~~~~l~~aGd~~~~~----~~~--~~~gA~~SG~~aA~~il~~ 371 (390)
.++++|||-||+-+.+- |++ ++-.|+..|++|++.+.+.
T Consensus 518 g~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~ 562 (566)
T 1qo8_A 518 SKPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKH 562 (566)
T ss_dssp SCEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 36899999999976532 332 4677999999999988654
No 294
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=47.46 E-value=15 Score=38.42 Aligned_cols=40 Identities=20% Similarity=0.169 Sum_probs=33.3
Q ss_pred CCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhhhhh
Q 016397 334 SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLA 376 (390)
Q Consensus 334 ~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~~~~ 376 (390)
+..+|||.+||-... ..+..|+..|+.||..|+..++...
T Consensus 408 ts~p~IyAaGD~a~~---~~l~~A~~~G~~aA~~i~~~lg~~~ 447 (965)
T 2gag_A 408 DAVANQHLAGAMTGR---LDTASALSTGAATGAAAATAAGFAT 447 (965)
T ss_dssp SCCTTEEECGGGGTC---CSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCCCEEEEEecCCc---hhHHHHHHHHHHHHHHHHHHcCCCc
Confidence 567899999998765 3566899999999999999887543
No 295
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=47.01 E-value=16 Score=34.81 Aligned_cols=38 Identities=26% Similarity=0.408 Sum_probs=30.7
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.+++..++||.+||-... +.....|+..|+.||+.|+.
T Consensus 304 ~~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 341 (499)
T 1xdi_A 304 VSRTLATGIYAAGDCTGL--LPLASVAAMQGRIAMYHALG 341 (499)
T ss_dssp SSBCSSTTEEECSGGGTS--CSCHHHHHHHHHHHHHHHTT
T ss_pred CcccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 355678999999998764 24567899999999999875
No 296
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=46.88 E-value=18 Score=35.80 Aligned_cols=35 Identities=26% Similarity=0.461 Sum_probs=27.5
Q ss_pred CCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 016397 335 PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 372 (390)
Q Consensus 335 ~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~ 372 (390)
.++||||||+-... .|.+.|..+|..|+..+....
T Consensus 377 ~~~gLf~AGqi~g~---~Gy~eA~a~G~~AG~naa~~~ 411 (641)
T 3cp8_A 377 PVENLFFAGQINGT---SGYEEAAAQGLMAGINAVRKI 411 (641)
T ss_dssp SSBTEEECSGGGTB---CCHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEEEeecCC---ccHHHHHHHHHHHHHHHHHHh
Confidence 47899999998887 467788889988887665443
No 297
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=46.46 E-value=17 Score=34.13 Aligned_cols=38 Identities=26% Similarity=0.234 Sum_probs=30.8
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
..++..++||.+||-.... .....|+..|+.||..|+.
T Consensus 296 ~~~t~~~~iya~GD~~~~~--~~~~~A~~~g~~aa~~i~~ 333 (467)
T 1zk7_A 296 GMRTSNPNIYAAGDCTDQP--QFVYVAAAAGTRAAINMTG 333 (467)
T ss_dssp TCBCSSTTEEECSTTBSSC--CCHHHHHHHHHHHHHHHTT
T ss_pred CcccCCCCEEEEeccCCCc--ccHHHHHHHHHHHHHHHcC
Confidence 3556789999999988652 5678899999999998864
No 298
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=46.25 E-value=17 Score=34.82 Aligned_cols=38 Identities=24% Similarity=0.257 Sum_probs=31.0
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.+++..++||.+||-... +.....|+..|+.||+.|+.
T Consensus 340 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 340 YLQTSVPNVYAVGDLIGG--PMEMFKARKSGCYAARNVMG 377 (523)
T ss_dssp TSBCSSTTEEECGGGGCS--SCSHHHHHHHHHHHHHHHTT
T ss_pred CCccCCCCEEEEeecCCC--cccHHHHHHHHHHHHHHHcC
Confidence 356778999999998864 25678899999999999874
No 299
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=46.02 E-value=8.7 Score=34.77 Aligned_cols=41 Identities=20% Similarity=0.232 Sum_probs=31.2
Q ss_pred CCCeEEecccccC--CCC---CchhHHHHHHHHHHHHHHHHhhhhh
Q 016397 336 VEGFYLAGDYTKQ--KYL---ASMEGAVLSGKLCAQAIVQDYVLLA 376 (390)
Q Consensus 336 ~~~l~~aGd~~~~--~~~---~~~~gA~~SG~~aA~~il~~~~~~~ 376 (390)
+||||++|-.... +.| ..+.+-+.||++||+.|++.++.--
T Consensus 293 ~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~~~~~~~~~~~ 338 (344)
T 3jsk_A 293 VPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIRVFDLRK 338 (344)
T ss_dssp ETTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEechhhHhhcCCCCCCcccceeeecCHHHHHHHHHHHHhhh
Confidence 5799999976532 121 3678889999999999999987543
No 300
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=45.80 E-value=30 Score=32.29 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=30.3
Q ss_pred CCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 332 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 332 ~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
+++..++||.+||.... +.....|...|+.||+.|+.
T Consensus 290 ~~t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 290 LRTRVPHIYAIGDVVRG--PMLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp SBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEecCCCC--ccCHHHHHHhHHHHHHHHcC
Confidence 45667899999998764 24677899999999999986
No 301
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=45.27 E-value=14 Score=35.63 Aligned_cols=40 Identities=25% Similarity=0.398 Sum_probs=30.1
Q ss_pred CCCCCCeEEecccccCC-C----C--CchhHHHHHHHHHHHHHHHHh
Q 016397 333 RSPVEGFYLAGDYTKQK-Y----L--ASMEGAVLSGKLCAQAIVQDY 372 (390)
Q Consensus 333 ~~~~~~l~~aGd~~~~~-~----~--~~~~gA~~SG~~aA~~il~~~ 372 (390)
+++++|||.||+-..++ | . .++-.|+..|++|++.+.+..
T Consensus 364 ~t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~ 410 (540)
T 1chu_A 364 RTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRM 410 (540)
T ss_dssp BCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 47899999999976332 1 1 246778999999999987654
No 302
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=44.62 E-value=17 Score=33.82 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=26.0
Q ss_pred CCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHH
Q 016397 335 PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 371 (390)
Q Consensus 335 ~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~ 371 (390)
.++||||||+-+.. .|.+.|..+|..|+......
T Consensus 327 ~~~~Lf~AGqi~G~---~Gy~eAaa~Gl~AG~naa~~ 360 (443)
T 3g5s_A 327 EAEGLYAAGVLAGV---EGYLESAATGFLAGLNAARK 360 (443)
T ss_dssp TEEEEEECGGGGTB---CSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEECcccccc---HHHHHHHHhHHHHHHHHHHH
Confidence 36899999998887 46677888888887655443
No 303
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=44.36 E-value=20 Score=33.65 Aligned_cols=37 Identities=16% Similarity=0.277 Sum_probs=30.3
Q ss_pred CCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 332 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 332 ~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
+++..+|||.+||-... +.....|...|+.||+.|..
T Consensus 293 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 293 CQTSMHNVWAIGDVAGE--PMLAHRAMAQGEMVAEIIAG 329 (458)
T ss_dssp CBCSSTTEEECGGGGCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred CcCCCCCEEEeeccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 45667999999998864 25677899999999999874
No 304
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=44.30 E-value=11 Score=36.73 Aligned_cols=39 Identities=21% Similarity=0.376 Sum_probs=29.5
Q ss_pred CCCCCCeEEecccccCC----CCC--chhHHHHHHHHHHHHHHHH
Q 016397 333 RSPVEGFYLAGDYTKQK----YLA--SMEGAVLSGKLCAQAIVQD 371 (390)
Q Consensus 333 ~~~~~~l~~aGd~~~~~----~~~--~~~gA~~SG~~aA~~il~~ 371 (390)
.++++|||-||+-+.+- |++ ++-.|+..|++|++.+.+.
T Consensus 523 g~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~ 567 (571)
T 1y0p_A 523 KQVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKY 567 (571)
T ss_dssp SCEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 36899999999976532 222 4677899999999988653
No 305
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=43.39 E-value=15 Score=32.66 Aligned_cols=35 Identities=14% Similarity=0.147 Sum_probs=27.9
Q ss_pred EEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 148 EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 148 ~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
.+..+..|+++.. ++ |.+.+|+++.+|.||+++..
T Consensus 249 ~i~~~~~v~~~~~--~~----v~~~~g~~i~~D~vi~a~G~ 283 (357)
T 4a9w_A 249 VLAAVPPPARFSP--TG----MQWADGTERAFDAVIWCTGF 283 (357)
T ss_dssp CCCEECCCSEEET--TE----EECTTSCEEECSEEEECCCB
T ss_pred ceEEecCcceEeC--Ce----eEECCCCEecCCEEEECCCc
Confidence 3778888888864 22 67788999999999999875
No 306
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=42.80 E-value=23 Score=35.07 Aligned_cols=33 Identities=21% Similarity=0.393 Sum_probs=25.4
Q ss_pred CCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 335 PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 335 ~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.++||||||+-..+ .|-+.|..+|..|+.....
T Consensus 383 ~~~gLf~AGqinGt---tGYeEAaaqGl~AG~nAa~ 415 (651)
T 3ces_A 383 FIQGLFFAGQINGT---TGYEEAAAQGLLAGLNAAR 415 (651)
T ss_dssp SSBTEEECSGGGTC---CCHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEecCC---cChHHHHHHHHHHHHHHHH
Confidence 36899999988776 4667888888888765543
No 307
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=41.30 E-value=27 Score=33.32 Aligned_cols=41 Identities=10% Similarity=0.053 Sum_probs=33.8
Q ss_pred CCCC-CCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHH
Q 016397 331 LQRS-PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 371 (390)
Q Consensus 331 ~~~~-~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~ 371 (390)
.+++ ..+|||.+||.....+|..-..|...|..+|+.|...
T Consensus 358 ~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 358 FLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp TSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 4455 4789999999887777777888999999999998764
No 308
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=40.40 E-value=47 Score=28.82 Aligned_cols=51 Identities=14% Similarity=0.155 Sum_probs=36.1
Q ss_pred chHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecCh
Q 016397 134 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 134 l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 188 (390)
+.........+.+..+..+..+...... +. . +...+++++++|++|+|+..
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~--~~~~~~~~~~~d~liiAtGs 114 (312)
T 4gcm_A 64 LSTKMFEHAKKFGAVYQYGDIKSVEDKG-EY-K--VINFGNKELTAKAVIIATGA 114 (312)
T ss_dssp HHHHHHHHHHHTTCEEEECCCCEEEECS-SC-E--EEECSSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHhhccccccceeeeeeeeee-cc-e--eeccCCeEEEeceeEEcccC
Confidence 4445555556677888888888777653 33 2 34457788999999999986
No 309
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=40.29 E-value=21 Score=35.00 Aligned_cols=41 Identities=17% Similarity=0.369 Sum_probs=29.9
Q ss_pred CCCCCCCeEEecccccCC-C----CC--chhHHHHHHHHHHHHHHHHh
Q 016397 332 QRSPVEGFYLAGDYTKQK-Y----LA--SMEGAVLSGKLCAQAIVQDY 372 (390)
Q Consensus 332 ~~~~~~~l~~aGd~~~~~-~----~~--~~~gA~~SG~~aA~~il~~~ 372 (390)
.+++++|||-||+-..++ | .+ ++-.|+..|++|++.+.+..
T Consensus 368 ~~~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~ 415 (602)
T 1kf6_A 368 CETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERA 415 (602)
T ss_dssp SBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 355899999999975321 2 12 46779999999998887654
No 310
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=40.23 E-value=27 Score=34.46 Aligned_cols=40 Identities=23% Similarity=0.353 Sum_probs=26.0
Q ss_pred CCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 016397 333 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 372 (390)
Q Consensus 333 ~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~ 372 (390)
.++++|||-||+-..++.......++..|+.|++.+.+..
T Consensus 428 ~t~I~GLyAaGe~a~~~~~r~~~~sl~~G~~ag~~aa~~~ 467 (643)
T 1jnr_A 428 MTTVKGLFAIGDCAGANPHKFSSGSFTEGRIAAKAAVRFI 467 (643)
T ss_dssp BCSSBTEEECGGGBCSCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeCCEEeeeccccccccccchhHHHHHHHHHHHHHHHH
Confidence 4789999999998765321222346666777666655443
No 311
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=39.96 E-value=16 Score=34.82 Aligned_cols=37 Identities=22% Similarity=0.441 Sum_probs=28.2
Q ss_pred CCCCCCeEEecccccC----CCCC--chhHHHHHHHHHHHHHH
Q 016397 333 RSPVEGFYLAGDYTKQ----KYLA--SMEGAVLSGKLCAQAIV 369 (390)
Q Consensus 333 ~~~~~~l~~aGd~~~~----~~~~--~~~gA~~SG~~aA~~il 369 (390)
.+|++|||-||+-+.+ .|++ ++-.|+.+|++|++.+.
T Consensus 465 g~~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa 507 (510)
T 4at0_A 465 GEPIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAA 507 (510)
T ss_dssp SSEEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHH
Confidence 3689999999997643 2333 46789999999998764
No 312
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=39.38 E-value=11 Score=37.67 Aligned_cols=36 Identities=19% Similarity=0.192 Sum_probs=30.1
Q ss_pred CCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 016397 334 SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 372 (390)
Q Consensus 334 ~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~ 372 (390)
+..++||.+||.... ..+..|+.+|..||..|...+
T Consensus 639 t~~~~VyaiGD~~~~---~~~~~A~~~g~~aa~~i~~~l 674 (690)
T 3k30_A 639 GEIASVRGIGDAWAP---GTIAAAVWSGRRAAEEFDAVL 674 (690)
T ss_dssp TSCSEEEECGGGTSC---BCHHHHHHHHHHHHHHTTCCC
T ss_pred cCCCCEEEEeCCCch---hhHHHHHHHHHHHHHHHHhhc
Confidence 456899999999876 467779999999999987664
No 313
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=38.17 E-value=30 Score=34.09 Aligned_cols=32 Identities=19% Similarity=0.373 Sum_probs=24.2
Q ss_pred CCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 336 VEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 336 ~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
++||||||+-..+ .|-+.|..+|..|+-....
T Consensus 389 ~~gLf~AGqinGt---~GyeEAaaqGl~AG~nAa~ 420 (637)
T 2zxi_A 389 IRGLFHAGNFNGT---TGYEEAAGQGIVAGINAAL 420 (637)
T ss_dssp SBTEEECGGGGTB---CSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeeecCCc---chHHHHHHHHHHHHHHHHH
Confidence 6899999998877 4667777788877754433
No 314
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=38.07 E-value=26 Score=32.88 Aligned_cols=40 Identities=5% Similarity=0.032 Sum_probs=30.7
Q ss_pred CCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 016397 334 SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 374 (390)
Q Consensus 334 ~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~~ 374 (390)
+..+|||.+||-..+. .+.+..|+..|..+|..|+.++..
T Consensus 349 t~~pgvya~GD~~~gp-~~~i~~a~~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 349 NGSPNEYVVGWIKRGP-TGVIGTNKKDAQDTVDTLIKNLGN 388 (456)
T ss_dssp TTCSSEEECTHHHHCS-CSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeccCCCC-chhHHHHHHHHHHHHHHHHHHHHh
Confidence 4578999999987532 124567999999999999988743
No 315
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=37.95 E-value=16 Score=33.93 Aligned_cols=34 Identities=26% Similarity=0.383 Sum_probs=23.8
Q ss_pred CCCCCeEEecccccCCC-CC--chhHHHHHHHHHHHH
Q 016397 334 SPVEGFYLAGDYTKQKY-LA--SMEGAVLSGKLCAQA 367 (390)
Q Consensus 334 ~~~~~l~~aGd~~~~~~-~~--~~~gA~~SG~~aA~~ 367 (390)
+-++||||||+-++... .+ .+.-|..||+.|++.
T Consensus 380 k~~~gLy~aGE~lD~~~~~GGynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 380 KEVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQD 416 (417)
T ss_dssp TTSTTEEECGGGBSEEECSSSHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEEeEecccCCCCHHHHHHHHHHHHHhCc
Confidence 34789999996554321 12 367799999988764
No 316
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=37.83 E-value=21 Score=34.35 Aligned_cols=45 Identities=20% Similarity=0.205 Sum_probs=32.2
Q ss_pred HHHHHHcCcEEE--cCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhh
Q 016397 139 VEHIQSLGGEVR--LNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 190 (390)
Q Consensus 139 ~~~l~~~G~~I~--l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 190 (390)
.+.+.+.++++. .+++|++|.. +| |+++| +++++|.||+|+....
T Consensus 345 ~~~~~~~~v~lv~~~~~~i~~i~~--~g----v~~~d-~~~~~D~ii~atG~~~ 391 (542)
T 1w4x_A 345 YEMFNRDNVHLVDTLSAPIETITP--RG----VRTSE-REYELDSLVLATGFDA 391 (542)
T ss_dssp HHHTTSTTEEEEETTTSCEEEECS--SE----EEESS-CEEECSEEEECCCCCC
T ss_pred HHHhCCCCEEEEecCCCCceEEcC--Ce----EEeCC-eEEecCEEEEcCCccc
Confidence 444444456665 3788999863 33 67778 8899999999998754
No 317
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=36.33 E-value=29 Score=32.96 Aligned_cols=39 Identities=26% Similarity=0.344 Sum_probs=30.3
Q ss_pred CCCCCCCeEEecccccC--------------------------------CCCCchhHHHHHHHHHHHHHHH
Q 016397 332 QRSPVEGFYLAGDYTKQ--------------------------------KYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 332 ~~~~~~~l~~aGd~~~~--------------------------------~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.++..+|||.+||.+.. +.+.....|+..|+.||+.|+.
T Consensus 300 ~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 300 QRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp CBCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHS
T ss_pred cccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhC
Confidence 45668899999998720 2345678899999999999874
No 318
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=36.16 E-value=38 Score=32.69 Aligned_cols=39 Identities=15% Similarity=0.297 Sum_probs=31.6
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~ 370 (390)
.++|..+|||-+||-+.. +|...+.|...|+.+|+.+..
T Consensus 345 ~~~Ts~p~IyAiGDv~~~-~p~La~~A~~eg~~aa~~i~g 383 (542)
T 4b1b_A 345 LSCTNIPSIFAVGDVAEN-VPELAPVAIKAGEILARRLFK 383 (542)
T ss_dssp TSBCSSTTEEECTTSBTT-CCCCHHHHHHHHHHHHHHHHS
T ss_pred cccccCCCeEEeccccCC-chhHHHHHHHHHHHHHHHHhc
Confidence 456888999999998754 445678899999999998875
No 319
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=35.95 E-value=11 Score=38.02 Aligned_cols=37 Identities=24% Similarity=0.440 Sum_probs=30.3
Q ss_pred CCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 016397 333 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 372 (390)
Q Consensus 333 ~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~ 372 (390)
++..++||.+||.... ..+..|+..|..||..|...+
T Consensus 663 ~t~~~~VyAiGD~~~~---~~~~~A~~~G~~aA~~i~~~l 699 (729)
T 1o94_A 663 ENDIKGIYLIGDAEAP---RLIADATFTGHRVAREIEEAN 699 (729)
T ss_dssp GGTCCEEEECGGGTSC---CCHHHHHHHHHHHHHTTTSSC
T ss_pred ccCCCCeEEEeCccch---hhHHHHHHHHHHHHHHhhhhc
Confidence 4567899999998764 567789999999999987654
No 320
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=35.20 E-value=11 Score=34.48 Aligned_cols=46 Identities=22% Similarity=0.178 Sum_probs=0.0
Q ss_pred chHHHHHHHHHcCcEEEcCceeeEEEECCCCCEEEEEEcCCeEEEcCEEEEecChhhHhh
Q 016397 134 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKL 193 (390)
Q Consensus 134 l~~~l~~~l~~~G~~I~l~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~~~~ 193 (390)
|.+.|.+.+++.|++|+++++|++|.... +++||.||.|...... +
T Consensus 100 l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-------------~~~ad~vV~AdG~~S~-R 145 (381)
T 3c4a_A 100 LVHALRDKCRSQGIAIRFESPLLEHGELP-------------LADYDLVVLANGVNHK-T 145 (381)
T ss_dssp HHHHHHHHHHHTTCEEETTCCCCSGGGCC-------------GGGCSEEEECCGGGGG-T
T ss_pred HHHHHHHHHHHCCCEEEeCCEeccchhcc-------------cccCCEEEECCCCCch-H
No 321
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=34.98 E-value=26 Score=30.30 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=29.4
Q ss_pred CCCeEEecccccC---CC--CCchhHHHHHHHHHHHHHHHHhh
Q 016397 336 VEGFYLAGDYTKQ---KY--LASMEGAVLSGKLCAQAIVQDYV 373 (390)
Q Consensus 336 ~~~l~~aGd~~~~---~~--~~~~~gA~~SG~~aA~~il~~~~ 373 (390)
.+++|.+|+.+.. .+ ...+.+++.||..+|..|.+.+.
T Consensus 233 ~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~ 275 (284)
T 1rp0_A 233 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALG 275 (284)
T ss_dssp ETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHTT
T ss_pred cCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHhh
Confidence 4799999987632 11 13678999999999999999875
No 322
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=34.69 E-value=26 Score=33.01 Aligned_cols=41 Identities=22% Similarity=0.289 Sum_probs=31.2
Q ss_pred CCC-CCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 016397 333 RSP-VEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 374 (390)
Q Consensus 333 ~~~-~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~~~ 374 (390)
++. .+|||.+||-..+. .+.+..|+..|..+|..|+.++..
T Consensus 355 rt~~~p~vya~Gd~~~g~-~~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 355 RVVDVPGLYCSGWVKRGP-TGVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp EETTCTTEEECTHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcCCCCEEEEEeCCcCC-CccHHHHHHHHHHHHHHHHHHHHh
Confidence 344 68999999877531 134678999999999999988743
No 323
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=31.58 E-value=48 Score=32.86 Aligned_cols=41 Identities=20% Similarity=0.357 Sum_probs=29.3
Q ss_pred CCCCCCCeEEecccccCC-C----C--CchhHHHHHHHHHHHHHHHHh
Q 016397 332 QRSPVEGFYLAGDYTKQK-Y----L--ASMEGAVLSGKLCAQAIVQDY 372 (390)
Q Consensus 332 ~~~~~~~l~~aGd~~~~~-~----~--~~~~gA~~SG~~aA~~il~~~ 372 (390)
.+++++|||-||+-..++ | . .++-.|+..|++|++.+.+..
T Consensus 381 ~~v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~ 428 (660)
T 2bs2_A 381 GEAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHC 428 (660)
T ss_dssp SBCSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 345899999999964221 1 1 246778999999998876654
No 324
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=29.51 E-value=33 Score=31.92 Aligned_cols=36 Identities=17% Similarity=0.299 Sum_probs=25.0
Q ss_pred EEcCceeeEEEECCCCCEEEEEEcCCeE-EEcCEEEEecCh
Q 016397 149 VRLNSRVQKIELNDDGTVKNFLLTNGNV-IDGDAYVFATPV 188 (390)
Q Consensus 149 I~l~~~V~~I~~~~~g~v~~V~~~~g~~-~~ad~VI~a~p~ 188 (390)
|.++..|++|..+ ++ +|++.||+. +.+|.||+++..
T Consensus 254 i~~~~~v~~~~~~-~~---~v~~~dG~~~~~~D~vi~atG~ 290 (447)
T 2gv8_A 254 LQQVPEITKFDPT-TR---EIYLKGGKVLSNIDRVIYCTGY 290 (447)
T ss_dssp EEEECCEEEEETT-TT---EEEETTTEEECCCSEEEECCCB
T ss_pred eEEecCeEEEecC-CC---EEEECCCCEeccCCEEEECCCC
Confidence 3345567777642 23 367888976 689999999875
No 325
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=29.20 E-value=23 Score=34.91 Aligned_cols=39 Identities=28% Similarity=0.467 Sum_probs=29.4
Q ss_pred CCCCCeEEeccccc-CCC----C--CchhHHHHHHHHHHHHHHHHh
Q 016397 334 SPVEGFYLAGDYTK-QKY----L--ASMEGAVLSGKLCAQAIVQDY 372 (390)
Q Consensus 334 ~~~~~l~~aGd~~~-~~~----~--~~~~gA~~SG~~aA~~il~~~ 372 (390)
++++|||-||+-.. +-| + .++-.|+..|++|++.+.+..
T Consensus 387 t~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~ 432 (621)
T 2h88_A 387 KVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIAETC 432 (621)
T ss_dssp EEEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHHHHHHHHHHHC
T ss_pred cccCceEEccccccccccCCCCCchHhHHHHHHHHHHHHHHHHHhh
Confidence 67999999999643 112 2 257889999999999887654
No 326
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=27.90 E-value=55 Score=32.43 Aligned_cols=42 Identities=19% Similarity=0.284 Sum_probs=27.1
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 016397 331 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 372 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~~~~~~gA~~SG~~aA~~il~~~ 372 (390)
...|.++|||-|||-...+.-+....++..|+.|+..+...+
T Consensus 447 ~~~t~v~gl~a~Ge~~~~~~hg~~~~sl~~g~~ag~~a~~~~ 488 (662)
T 3gyx_A 447 NRMTTVEGLWTCADGVGASGHKFSSGSHAEGRIVGKQMVRWY 488 (662)
T ss_dssp TTBCSSBTEECCSSSBCSCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccCCeEeCccccccccCccHhHHHHHHHHHHHHHHHHH
Confidence 456889999999998653321224456666777666665544
No 327
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=26.47 E-value=20 Score=33.89 Aligned_cols=40 Identities=13% Similarity=0.147 Sum_probs=27.7
Q ss_pred CCCCCCCCeEEecccccCCC----C---CchhHHHHHHHHHHHHHHH
Q 016397 331 LQRSPVEGFYLAGDYTKQKY----L---ASMEGAVLSGKLCAQAIVQ 370 (390)
Q Consensus 331 ~~~~~~~~l~~aGd~~~~~~----~---~~~~gA~~SG~~aA~~il~ 370 (390)
..+++++|||-|||-...++ + .++..++..|+.|++.+..
T Consensus 324 ~~~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 324 RGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp TCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGTTTS
T ss_pred CCccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHHHHHHh
Confidence 35678999999999876321 1 1456677778888777644
No 328
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=22.22 E-value=26 Score=34.21 Aligned_cols=38 Identities=18% Similarity=0.288 Sum_probs=28.0
Q ss_pred CCCCeEEecccccC-C----CCC--chhHHHHHHHHHHHHHHHHh
Q 016397 335 PVEGFYLAGDYTKQ-K----YLA--SMEGAVLSGKLCAQAIVQDY 372 (390)
Q Consensus 335 ~~~~l~~aGd~~~~-~----~~~--~~~gA~~SG~~aA~~il~~~ 372 (390)
+++|||-||+-..+ - +++ ++-.|+..|++|++.+.+..
T Consensus 379 ~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa~~~ 423 (588)
T 2wdq_A 379 VVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESI 423 (588)
T ss_dssp EEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHTHHHHH
T ss_pred eeCCceeCccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhh
Confidence 78999999996432 1 222 46779999999998876654
No 329
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=21.86 E-value=38 Score=32.18 Aligned_cols=41 Identities=12% Similarity=0.187 Sum_probs=24.5
Q ss_pred EEEcCceeeEEEECCC-CCEE-----------EEEEcCCeEEEcCEEEEecCh
Q 016397 148 EVRLNSRVQKIELNDD-GTVK-----------NFLLTNGNVIDGDAYVFATPV 188 (390)
Q Consensus 148 ~I~l~~~V~~I~~~~~-g~v~-----------~V~~~~g~~~~ad~VI~a~p~ 188 (390)
++..+..|.++....+ +++. +|.+.+|+++++|.||+||..
T Consensus 355 ~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy 407 (501)
T 4b63_A 355 RILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGY 407 (501)
T ss_dssp EEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCE
T ss_pred eecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCC
Confidence 4666666766665322 2221 234457888999999999986
No 330
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=20.41 E-value=79 Score=28.56 Aligned_cols=36 Identities=17% Similarity=0.113 Sum_probs=29.7
Q ss_pred CCeEEecccccCCCC---CchhHHHHHHHHHHHHHHHHh
Q 016397 337 EGFYLAGDYTKQKYL---ASMEGAVLSGKLCAQAIVQDY 372 (390)
Q Consensus 337 ~~l~~aGd~~~~~~~---~~~~gA~~SG~~aA~~il~~~ 372 (390)
+|+.++||..+.-.| .|++-|+.+|..+|+.|...+
T Consensus 286 ~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~ 324 (399)
T 2x3n_A 286 DNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLAL 324 (399)
T ss_dssp TTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhh
Confidence 689999998776544 589999999999999887653
Done!