Query 016399
Match_columns 390
No_of_seqs 197 out of 2051
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 06:30:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016399.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016399hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 1.7E-37 3.8E-42 294.8 30.5 320 19-347 11-333 (358)
2 PRK11272 putative DMT superfam 100.0 2.2E-31 4.8E-36 248.8 27.1 278 22-344 9-287 (292)
3 PRK11453 O-acetylserine/cystei 100.0 6E-31 1.3E-35 246.7 27.1 279 23-345 6-290 (299)
4 PRK15430 putative chlorampheni 100.0 2.5E-30 5.3E-35 242.1 25.5 281 14-343 1-286 (296)
5 PRK11689 aromatic amino acid e 100.0 2.2E-30 4.7E-35 242.4 24.3 284 19-344 2-289 (295)
6 PRK10532 threonine and homoser 100.0 6.9E-30 1.5E-34 238.8 26.0 276 18-345 9-284 (293)
7 TIGR00950 2A78 Carboxylate/Ami 100.0 7.8E-30 1.7E-34 234.6 25.7 258 33-337 1-259 (260)
8 TIGR00817 tpt Tpt phosphate/ph 100.0 7.3E-28 1.6E-32 226.3 25.0 282 23-344 4-295 (302)
9 TIGR03340 phn_DUF6 phosphonate 100.0 7.7E-27 1.7E-31 217.0 25.6 273 23-339 3-280 (281)
10 PTZ00343 triose or hexose phos 99.9 2E-25 4.4E-30 213.0 27.3 285 18-343 46-349 (350)
11 PF06027 DUF914: Eukaryotic pr 99.9 5.8E-25 1.3E-29 204.9 29.4 298 20-349 12-312 (334)
12 TIGR00688 rarD rarD protein. T 99.9 1.1E-24 2.3E-29 200.1 23.3 248 21-317 2-255 (256)
13 COG0697 RhaT Permeases of the 99.9 8.3E-23 1.8E-27 190.5 27.7 281 19-343 5-288 (292)
14 COG2962 RarD Predicted permeas 99.9 1.1E-22 2.4E-27 180.6 24.7 280 19-346 5-287 (293)
15 COG5006 rhtA Threonine/homoser 99.9 2.5E-22 5.4E-27 173.5 23.7 274 22-346 13-286 (292)
16 KOG4510 Permease of the drug/m 99.9 3.7E-24 8E-29 185.9 3.1 291 18-342 35-325 (346)
17 TIGR00776 RhaT RhaT L-rhamnose 99.9 1.1E-20 2.3E-25 176.0 21.5 274 22-342 2-288 (290)
18 PF08449 UAA: UAA transporter 99.8 7.1E-18 1.5E-22 158.4 25.4 281 35-347 14-302 (303)
19 KOG2765 Predicted membrane pro 99.8 1.4E-18 3.1E-23 158.4 18.3 301 17-347 10-395 (416)
20 KOG2234 Predicted UDP-galactos 99.7 2.9E-15 6.4E-20 137.2 27.1 298 21-346 15-326 (345)
21 KOG1441 Glucose-6-phosphate/ph 99.7 1.9E-17 4.2E-22 152.6 10.6 290 20-349 16-314 (316)
22 COG2510 Predicted membrane pro 99.7 1.9E-16 4.1E-21 123.1 11.4 135 21-163 3-138 (140)
23 PF04142 Nuc_sug_transp: Nucle 99.7 3.4E-15 7.3E-20 134.8 17.9 232 80-333 12-244 (244)
24 COG2510 Predicted membrane pro 99.6 1.4E-14 3.1E-19 112.6 14.5 136 204-342 4-139 (140)
25 KOG1580 UDP-galactose transpor 99.6 3.6E-14 7.7E-19 121.8 16.5 224 87-342 87-313 (337)
26 KOG2766 Predicted membrane pro 99.6 2.4E-15 5.2E-20 130.4 6.3 252 49-342 47-299 (336)
27 KOG1443 Predicted integral mem 99.6 8E-13 1.7E-17 118.0 22.1 253 50-340 45-313 (349)
28 KOG1444 Nucleotide-sugar trans 99.6 1.2E-12 2.6E-17 118.5 23.3 292 18-349 9-307 (314)
29 PF00892 EamA: EamA-like trans 99.4 2.1E-13 4.4E-18 110.6 7.3 125 31-163 1-125 (126)
30 PF00892 EamA: EamA-like trans 99.4 4.6E-13 1E-17 108.5 8.9 125 213-341 1-125 (126)
31 KOG1442 GDP-fucose transporter 99.4 6.2E-13 1.3E-17 116.8 7.5 268 49-352 60-337 (347)
32 KOG3912 Predicted integral mem 99.4 1.2E-11 2.6E-16 109.0 15.2 279 34-341 16-333 (372)
33 KOG1581 UDP-galactose transpor 99.4 2.1E-11 4.5E-16 109.1 16.5 265 49-346 50-317 (327)
34 KOG1583 UDP-N-acetylglucosamin 99.3 1.3E-11 2.9E-16 108.7 11.8 262 51-342 34-314 (330)
35 PF06800 Sugar_transport: Suga 99.3 1.1E-09 2.3E-14 98.9 23.0 251 49-339 11-268 (269)
36 COG5070 VRG4 Nucleotide-sugar 99.2 8.3E-11 1.8E-15 100.5 11.1 275 38-348 23-302 (309)
37 KOG1582 UDP-galactose transpor 99.2 5.7E-10 1.2E-14 98.2 15.5 228 85-347 106-337 (367)
38 KOG4314 Predicted carbohydrate 99.2 7.9E-11 1.7E-15 98.8 9.4 212 96-344 63-278 (290)
39 TIGR00950 2A78 Carboxylate/Ami 99.2 2.6E-10 5.6E-15 104.8 13.6 133 19-160 126-260 (260)
40 PRK13499 rhamnose-proton sympo 99.1 2E-08 4.4E-13 94.2 23.7 296 19-343 5-342 (345)
41 PF03151 TPT: Triose-phosphate 99.1 1.1E-09 2.4E-14 92.1 13.9 138 204-342 1-153 (153)
42 PRK15430 putative chlorampheni 99.1 1E-09 2.2E-14 102.8 14.9 140 199-341 4-144 (296)
43 PF13536 EmrE: Multidrug resis 99.1 8.9E-11 1.9E-15 93.6 6.1 103 55-164 2-106 (113)
44 TIGR00688 rarD rarD protein. T 99.1 2.3E-09 5E-14 98.3 13.8 136 203-341 2-141 (256)
45 TIGR03340 phn_DUF6 phosphonate 99.0 6.5E-09 1.4E-13 96.7 14.7 133 205-342 3-135 (281)
46 PRK10532 threonine and homoser 99.0 6.3E-09 1.4E-13 97.4 14.4 136 20-165 147-282 (293)
47 PF05653 Mg_trans_NIPA: Magnes 99.0 1.2E-08 2.7E-13 95.0 16.1 279 19-345 5-295 (300)
48 PRK11272 putative DMT superfam 99.0 4.8E-09 1E-13 98.1 13.2 138 19-164 148-285 (292)
49 PLN00411 nodulin MtN21 family 99.0 1.1E-08 2.3E-13 97.9 14.5 137 20-165 188-329 (358)
50 COG4975 GlcU Putative glucose 98.9 6.9E-10 1.5E-14 96.5 3.5 278 22-342 3-285 (288)
51 PRK02971 4-amino-4-deoxy-L-ara 98.9 4.5E-08 9.8E-13 79.3 12.9 122 203-345 2-125 (129)
52 TIGR00803 nst UDP-galactose tr 98.9 3.4E-08 7.4E-13 88.5 12.3 202 116-340 8-222 (222)
53 PRK11689 aromatic amino acid e 98.8 4.1E-08 8.9E-13 92.0 12.5 133 20-164 155-287 (295)
54 PF13536 EmrE: Multidrug resis 98.8 2.5E-08 5.5E-13 79.4 9.4 107 238-345 3-109 (113)
55 PRK11453 O-acetylserine/cystei 98.8 1.7E-07 3.8E-12 87.9 14.1 137 20-163 142-286 (299)
56 TIGR00817 tpt Tpt phosphate/ph 98.7 8.8E-08 1.9E-12 90.0 10.4 140 19-164 143-293 (302)
57 KOG2922 Uncharacterized conser 98.7 2.1E-08 4.6E-13 90.9 5.1 282 16-347 16-311 (335)
58 COG2962 RarD Predicted permeas 98.7 3.4E-07 7.4E-12 82.3 11.8 140 202-344 6-146 (293)
59 PTZ00343 triose or hexose phos 98.5 2.2E-06 4.9E-11 82.1 15.3 139 203-343 49-187 (350)
60 PF03151 TPT: Triose-phosphate 98.5 1.1E-06 2.4E-11 73.8 11.7 133 22-161 1-150 (153)
61 PRK15051 4-amino-4-deoxy-L-ara 98.5 1.5E-06 3.3E-11 68.6 9.9 67 275-341 42-108 (111)
62 TIGR00776 RhaT RhaT L-rhamnose 98.4 4.5E-06 9.7E-11 77.9 12.7 128 20-163 151-287 (290)
63 COG0697 RhaT Permeases of the 98.4 6.3E-06 1.4E-10 76.5 13.6 133 20-163 153-286 (292)
64 PRK15051 4-amino-4-deoxy-L-ara 98.3 4.7E-06 1E-10 65.8 9.5 70 88-163 39-108 (111)
65 PRK02971 4-amino-4-deoxy-L-ara 98.3 1.1E-05 2.4E-10 65.3 10.3 118 21-163 2-121 (129)
66 PF06027 DUF914: Eukaryotic pr 98.1 5.3E-05 1.1E-09 71.4 13.9 143 202-346 12-155 (334)
67 KOG4510 Permease of the drug/m 98.1 7.5E-07 1.6E-11 78.7 1.2 136 202-345 37-172 (346)
68 COG5006 rhtA Threonine/homoser 98.1 3.7E-05 8.1E-10 67.7 10.3 136 19-163 146-281 (292)
69 PF08449 UAA: UAA transporter 98.1 9.1E-05 2E-09 69.7 13.7 131 213-349 10-143 (303)
70 PF04657 DUF606: Protein of un 98.0 0.00015 3.3E-09 59.6 12.8 132 204-339 2-138 (138)
71 PF06800 Sugar_transport: Suga 98.0 6.1E-05 1.3E-09 68.3 10.0 133 18-160 135-267 (269)
72 PRK10452 multidrug efflux syst 97.8 6.7E-05 1.5E-09 59.7 7.3 69 276-344 36-105 (120)
73 PF05653 Mg_trans_NIPA: Magnes 97.8 0.0001 2.2E-09 68.9 9.2 119 199-342 3-122 (300)
74 PRK09541 emrE multidrug efflux 97.7 0.00012 2.7E-09 57.4 7.0 68 277-344 37-105 (110)
75 PF06379 RhaT: L-rhamnose-prot 97.7 0.011 2.4E-07 55.1 20.6 299 19-342 5-340 (344)
76 COG2076 EmrE Membrane transpor 97.5 0.00033 7E-09 53.9 6.9 65 279-343 39-104 (106)
77 PRK10650 multidrug efflux syst 97.5 0.0016 3.5E-08 50.9 10.8 64 278-341 43-107 (109)
78 COG3238 Uncharacterized protei 97.5 0.0022 4.9E-08 52.7 11.5 138 202-342 4-146 (150)
79 PRK11431 multidrug efflux syst 97.5 0.00054 1.2E-08 53.2 7.3 66 277-342 36-102 (105)
80 PRK10452 multidrug efflux syst 97.3 0.00041 8.8E-09 55.2 5.2 67 91-163 35-102 (120)
81 PRK09541 emrE multidrug efflux 97.3 0.00051 1.1E-08 53.9 5.4 66 92-163 36-102 (110)
82 PRK10650 multidrug efflux syst 97.3 0.0022 4.7E-08 50.2 8.9 64 93-162 42-106 (109)
83 COG2076 EmrE Membrane transpor 97.3 0.00047 1E-08 53.1 4.8 66 92-163 36-102 (106)
84 PF04142 Nuc_sug_transp: Nucle 97.2 0.00098 2.1E-08 60.4 7.0 81 266-347 14-94 (244)
85 PRK13499 rhamnose-proton sympo 97.2 0.012 2.5E-07 55.8 14.2 146 17-164 170-341 (345)
86 PRK11431 multidrug efflux syst 97.2 0.00088 1.9E-08 52.1 5.5 65 93-163 36-101 (105)
87 KOG1441 Glucose-6-phosphate/ph 97.1 0.0012 2.6E-08 61.6 6.9 138 18-163 160-306 (316)
88 PF10639 UPF0546: Uncharacteri 97.1 0.0014 3.1E-08 51.3 6.0 110 27-162 2-112 (113)
89 PF07857 DUF1632: CEO family ( 97.1 0.0012 2.7E-08 59.6 6.4 133 204-348 1-140 (254)
90 PF04657 DUF606: Protein of un 97.0 0.0068 1.5E-07 49.8 9.7 130 23-161 3-138 (138)
91 PF00893 Multi_Drug_Res: Small 97.0 0.0017 3.8E-08 49.4 5.7 57 277-333 36-93 (93)
92 PF07857 DUF1632: CEO family ( 97.0 0.0036 7.7E-08 56.6 8.4 196 22-228 1-208 (254)
93 KOG2765 Predicted membrane pro 97.0 0.0049 1.1E-07 57.7 9.2 141 18-164 244-390 (416)
94 COG4975 GlcU Putative glucose 96.6 0.0024 5.3E-08 56.3 4.4 133 204-346 3-140 (288)
95 PF10639 UPF0546: Uncharacteri 96.6 0.024 5.2E-07 44.5 9.5 110 209-340 2-112 (113)
96 KOG2234 Predicted UDP-galactos 96.3 0.17 3.7E-06 47.4 14.5 141 204-345 16-167 (345)
97 PF00893 Multi_Drug_Res: Small 96.2 0.0066 1.4E-07 46.2 4.1 57 92-154 35-92 (93)
98 KOG1444 Nucleotide-sugar trans 95.8 0.11 2.4E-06 48.0 10.5 138 19-163 155-299 (314)
99 COG3238 Uncharacterized protei 95.5 0.17 3.7E-06 41.8 9.6 139 20-162 4-144 (150)
100 PF06379 RhaT: L-rhamnose-prot 94.9 0.21 4.5E-06 46.8 9.4 141 199-343 3-154 (344)
101 KOG2922 Uncharacterized conser 94.6 0.019 4E-07 52.9 1.9 124 198-345 16-139 (335)
102 KOG1581 UDP-galactose transpor 94.4 0.3 6.5E-06 44.8 9.0 139 18-164 169-313 (327)
103 KOG4314 Predicted carbohydrate 94.0 0.062 1.4E-06 45.9 3.7 66 282-347 65-130 (290)
104 TIGR00803 nst UDP-galactose tr 94.0 0.11 2.4E-06 46.3 5.6 60 96-161 162-221 (222)
105 KOG1443 Predicted integral mem 93.8 0.62 1.3E-05 42.9 9.8 125 221-346 34-160 (349)
106 COG5070 VRG4 Nucleotide-sugar 93.3 0.28 6.1E-06 42.9 6.5 136 22-164 156-296 (309)
107 PF07168 Ureide_permease: Urei 92.8 0.1 2.2E-06 47.8 3.2 130 209-341 2-145 (336)
108 KOG1442 GDP-fucose transporter 92.1 0.35 7.6E-06 43.7 5.6 142 19-167 183-330 (347)
109 KOG1580 UDP-galactose transpor 91.5 2.1 4.6E-05 37.9 9.7 136 20-163 171-312 (337)
110 PF07168 Ureide_permease: Urei 89.4 0.55 1.2E-05 43.1 4.5 129 26-161 1-143 (336)
111 PF05297 Herpes_LMP1: Herpesvi 88.1 0.15 3.2E-06 46.0 0.0 17 147-163 80-96 (381)
112 KOG4831 Unnamed protein [Funct 87.6 11 0.00024 28.9 9.8 112 24-163 6-124 (125)
113 PRK02237 hypothetical protein; 85.3 4.8 0.0001 31.1 6.8 48 298-345 61-108 (109)
114 KOG3912 Predicted integral mem 84.9 8.9 0.00019 35.1 9.4 65 279-343 95-159 (372)
115 PF02694 UPF0060: Uncharacteri 84.5 4.8 0.0001 31.0 6.5 47 299-345 60-106 (107)
116 KOG2766 Predicted membrane pro 82.6 0.14 3E-06 45.7 -2.8 120 219-346 34-154 (336)
117 PF03547 Mem_trans: Membrane t 80.7 41 0.00089 32.4 13.4 20 269-288 62-81 (385)
118 PRK06638 NADH:ubiquinone oxido 78.1 46 0.001 29.0 13.0 31 311-341 133-165 (198)
119 KOG1582 UDP-galactose transpor 76.9 10 0.00022 34.6 6.9 140 20-166 189-334 (367)
120 PF04342 DUF486: Protein of un 76.8 3.9 8.5E-05 31.4 3.7 31 311-341 77-107 (108)
121 PF06570 DUF1129: Protein of u 75.5 46 0.001 29.2 10.9 47 84-134 145-191 (206)
122 PF06609 TRI12: Fungal trichot 72.6 1.2E+02 0.0027 31.3 17.9 16 57-72 276-291 (599)
123 KOG4831 Unnamed protein [Funct 70.5 15 0.00033 28.2 5.5 60 282-341 64-124 (125)
124 COG3169 Uncharacterized protei 68.4 12 0.00027 28.2 4.6 33 310-342 83-115 (116)
125 COG1742 Uncharacterized conser 67.9 25 0.00055 27.0 6.2 48 298-345 60-107 (109)
126 KOG1583 UDP-N-acetylglucosamin 64.0 76 0.0016 29.2 9.5 133 20-163 163-313 (330)
127 COG4858 Uncharacterized membra 63.2 90 0.002 26.8 9.2 113 22-141 101-213 (226)
128 PRK02237 hypothetical protein; 61.6 54 0.0012 25.4 7.0 47 111-163 57-104 (109)
129 PF04342 DUF486: Protein of un 61.3 35 0.00076 26.3 5.9 32 124-161 74-105 (108)
130 COG4657 RnfA Predicted NADH:ub 56.1 49 0.0011 27.7 6.4 53 198-250 127-184 (193)
131 PRK03893 putative sialic acid 53.4 2.4E+02 0.0051 27.9 13.8 7 47-53 51-57 (496)
132 PF06946 Phage_holin_5: Phage 51.3 66 0.0014 24.2 5.9 59 288-346 22-84 (93)
133 PRK13108 prolipoprotein diacyl 49.8 2.8E+02 0.0061 27.7 20.6 23 322-344 254-276 (460)
134 PRK10263 DNA translocase FtsK; 48.2 4.7E+02 0.01 29.9 14.8 16 148-163 24-39 (1355)
135 PF02694 UPF0060: Uncharacteri 47.0 62 0.0013 25.1 5.3 52 107-164 51-103 (107)
136 PF15108 TMEM37: Voltage-depen 45.6 94 0.002 25.8 6.4 81 148-252 91-173 (184)
137 COG3086 RseC Positive regulato 44.6 9.3 0.0002 31.2 0.6 24 294-317 72-95 (150)
138 PF15050 SCIMP: SCIMP protein 43.1 7.2 0.00016 30.5 -0.2 10 327-336 11-20 (133)
139 PF15102 TMEM154: TMEM154 prot 41.9 30 0.00066 28.4 3.1 22 327-348 66-87 (146)
140 PF03595 SLAC1: Voltage-depend 41.1 2.5E+02 0.0054 26.3 10.0 78 148-252 6-91 (330)
141 PF08507 COPI_assoc: COPI asso 39.5 48 0.001 26.9 4.1 16 325-340 88-103 (136)
142 PF11044 TMEMspv1-c74-12: Plec 39.2 28 0.00061 22.0 2.0 17 322-338 2-18 (49)
143 PLN00028 nitrate transmembrane 38.7 3.9E+02 0.0084 26.5 11.3 15 327-341 417-431 (476)
144 TIGR00892 2A0113 monocarboxyla 38.4 4E+02 0.0086 26.2 12.6 8 1-8 1-8 (455)
145 PF09945 DUF2177: Predicted me 35.3 2.4E+02 0.0052 22.7 7.7 45 205-251 78-122 (128)
146 PF06123 CreD: Inner membrane 34.8 4.7E+02 0.01 26.0 13.0 116 203-336 300-415 (430)
147 PF05977 MFS_3: Transmembrane 33.0 5.4E+02 0.012 26.2 19.2 37 303-339 353-389 (524)
148 COG1742 Uncharacterized conser 32.8 1.9E+02 0.004 22.4 5.9 39 120-164 66-104 (109)
149 PF06609 TRI12: Fungal trichot 32.7 5.9E+02 0.013 26.5 22.4 27 138-164 230-256 (599)
150 KOG1623 Multitransmembrane pro 32.4 3.8E+02 0.0083 24.2 10.7 31 200-230 125-155 (243)
151 TIGR03802 Asp_Ala_antiprt aspa 31.9 5.2E+02 0.011 26.6 11.0 25 271-295 120-144 (562)
152 TIGR00939 2a57 Equilibrative N 31.8 4.4E+02 0.0096 26.1 10.3 24 207-230 50-73 (437)
153 PF15099 PIRT: Phosphoinositid 31.4 23 0.0005 28.1 0.9 16 271-286 58-73 (129)
154 PF15345 TMEM51: Transmembrane 31.0 30 0.00065 30.7 1.6 22 327-348 66-87 (233)
155 PRK10599 calcium/sodium:proton 30.4 5.1E+02 0.011 25.1 13.4 91 202-294 39-131 (366)
156 PF01350 Flavi_NS4A: Flaviviru 29.3 3.3E+02 0.0071 22.5 7.2 71 271-346 50-120 (144)
157 PF10754 DUF2569: Protein of u 29.2 1.8E+02 0.0039 24.0 6.0 29 199-227 117-145 (149)
158 KOG1289 Amino acid transporter 28.5 1.9E+02 0.004 29.5 6.8 49 294-342 446-508 (550)
159 TIGR00893 2A0114 d-galactonate 28.2 4.8E+02 0.01 24.1 11.5 10 220-229 47-56 (399)
160 TIGR00836 amt ammonium transpo 28.1 5.5E+02 0.012 25.2 10.0 258 5-300 115-385 (403)
161 COG4858 Uncharacterized membra 27.9 4E+02 0.0087 23.0 9.4 9 213-221 110-118 (226)
162 COG2271 UhpC Sugar phosphate p 27.4 4.1E+02 0.0089 26.3 8.7 46 303-349 166-212 (448)
163 COG4665 FcbT2 TRAP-type mannit 26.4 4E+02 0.0088 22.6 10.8 54 21-75 20-73 (182)
164 PF08693 SKG6: Transmembrane a 25.5 58 0.0013 20.4 1.8 18 328-345 21-38 (40)
165 PF07214 DUF1418: Protein of u 25.4 38 0.00082 25.6 1.1 21 326-346 49-69 (96)
166 COG4237 HyfE Hydrogenase 4 mem 25.4 4.5E+02 0.0098 22.8 8.6 40 125-164 73-112 (218)
167 COG3965 Predicted Co/Zn/Cd cat 25.2 5.4E+02 0.012 23.6 11.4 102 31-133 104-208 (314)
168 PRK11010 ampG muropeptide tran 25.2 6.9E+02 0.015 24.9 12.1 21 322-342 381-401 (491)
169 PRK09556 uhpT sugar phosphate 25.2 6.6E+02 0.014 24.6 13.1 9 290-298 374-382 (467)
170 COG0004 AmtB Ammonia permease 25.1 6.6E+02 0.014 24.7 10.6 240 20-300 133-384 (409)
171 TIGR01167 LPXTG_anchor LPXTG-m 24.9 1.1E+02 0.0024 17.8 2.9 19 322-340 10-28 (34)
172 PRK12489 anaerobic C4-dicarbox 24.8 7E+02 0.015 24.8 14.9 13 125-137 6-18 (443)
173 PRK14789 lipoprotein signal pe 24.8 2.1E+02 0.0045 24.8 5.7 11 327-337 136-146 (191)
174 MTH00057 ND6 NADH dehydrogenas 24.5 4.6E+02 0.0099 22.6 11.1 31 311-341 132-164 (186)
175 PF01102 Glycophorin_A: Glycop 24.4 35 0.00076 27.2 0.8 6 329-334 76-81 (122)
176 COG1968 BacA Undecaprenyl pyro 24.1 5.7E+02 0.012 23.5 17.4 89 22-114 86-174 (270)
177 COG2245 Predicted membrane pro 23.9 4.5E+02 0.0099 22.3 8.5 22 209-230 29-50 (182)
178 COG0387 ChaA Ca2+/H+ antiporte 23.8 6.7E+02 0.014 24.2 13.9 22 320-341 161-182 (368)
179 PF15048 OSTbeta: Organic solu 23.1 41 0.0009 26.7 1.0 27 315-341 25-55 (125)
180 PF14851 FAM176: FAM176 family 22.0 2.6E+02 0.0056 23.3 5.5 10 295-304 18-27 (153)
181 PF06168 DUF981: Protein of un 21.4 5.4E+02 0.012 22.3 12.5 107 48-163 4-113 (191)
182 KOG2533 Permease of the major 21.4 7E+02 0.015 25.2 9.6 12 122-133 182-193 (495)
183 PF10225 DUF2215: Uncharacteri 21.2 6.2E+02 0.014 22.9 11.1 36 290-325 115-150 (249)
184 PRK05122 major facilitator sup 21.1 7.1E+02 0.015 23.5 12.2 32 310-341 355-386 (399)
185 PF07444 Ycf66_N: Ycf66 protei 20.9 54 0.0012 24.3 1.1 26 321-346 4-29 (84)
186 TIGR00881 2A0104 phosphoglycer 20.8 6.6E+02 0.014 23.1 11.2 18 213-230 41-58 (379)
187 PF04550 Phage_holin_2: Phage 20.7 2.3E+02 0.0049 21.2 4.3 32 132-163 24-55 (89)
188 PRK10473 multidrug efflux syst 20.2 7.4E+02 0.016 23.4 21.2 16 123-138 167-182 (392)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=1.7e-37 Score=294.80 Aligned_cols=320 Identities=29% Similarity=0.578 Sum_probs=252.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhc-ccCCCCCHHHHHHHHHHHHHHHH
Q 016399 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEK-KERPAMTLNFALQFILLALVGIT 97 (390)
Q Consensus 19 ~~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~ 97 (390)
+.+.++.|++..+.++...++.|.+.+.+++|..+.++|+.++.++++++.+++++ ++.++.+++++..+.+.|+++ .
T Consensus 11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g-~ 89 (358)
T PLN00411 11 EAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG-S 89 (358)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-H
Confidence 56789999999999999999999999999999999999999999999998876544 333445678888999999998 6
Q ss_pred HHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCC-CC
Q 016399 98 ANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPA-PP 176 (390)
Q Consensus 98 ~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~-~~ 176 (390)
+++.+++.|++++++++++++.++.|+++.+++++++.|+++.|||.++.+++|++++++|+.++...++......+ +.
T Consensus 90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~ 169 (358)
T PLN00411 90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPP 169 (358)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence 78889999999999999999999999999999999987777777777779999999999999998754432210000 00
Q ss_pred CCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcc
Q 016399 177 LNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFER 256 (390)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (390)
..+. .+..+....+ ..++..|++++++++++|++|.+++|+..+++++....++++..++.+...+.....+.
T Consensus 170 ~~~~-----~~~~~~~~~~--~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~ 242 (358)
T PLN00411 170 YLNF-----RQLSPPLSSS--NSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEK 242 (358)
T ss_pred cccc-----cccccccCCC--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHcc
Confidence 0000 0000000011 23456799999999999999999999998888755567777777777776666665443
Q ss_pred c-ccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHH
Q 016399 257 N-LDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVV 335 (390)
Q Consensus 257 ~-~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~ 335 (390)
. ...|..........+++.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|+.
T Consensus 243 ~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~ 321 (358)
T PLN00411 243 NNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITL 321 (358)
T ss_pred CCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 2 222221122234457777775 67899999999999999999999999999999999999999999999999999999
Q ss_pred HhhheeecCcch
Q 016399 336 GLYLVLWGKSEE 347 (390)
Q Consensus 336 gv~l~~~~~~~~ 347 (390)
|+++..+.++++
T Consensus 322 Gv~l~~~~~~~~ 333 (358)
T PLN00411 322 GFYAVMWGKANE 333 (358)
T ss_pred HHHHHHhhhhhh
Confidence 999988755544
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=2.2e-31 Score=248.81 Aligned_cols=278 Identities=19% Similarity=0.226 Sum_probs=231.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 016399 22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG 101 (390)
Q Consensus 22 ~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 101 (390)
-++..++..++||.++++.|...+ +++|..++++|+.++.++++++...+++ + ..+++++......|.++...++.
T Consensus 9 ~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~~-~--~~~~~~~~~~~~~g~~~~~~~~~ 84 (292)
T PRK11272 9 LFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLRGH-P--LPTLRQWLNAALIGLLLLAVGNG 84 (292)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHhCC-C--CCcHHHHHHHHHHHHHHHHHHHH
Confidence 467788889999999999999988 6999999999999999998887654332 2 23567888888899887777888
Q ss_pred HHHHhc-ccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCCCCC
Q 016399 102 FYLLGL-ENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQI 180 (390)
Q Consensus 102 ~~~~al-~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~ 180 (390)
+++.+. ++++++.++++.++.|+++.+++++ +|||+++ .+++|++++++|+.++.. ++ .
T Consensus 85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~------~~~~~~~la~~Gv~ll~~-~~-~----------- 144 (292)
T PRK11272 85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRK------LEWLGIAIGLAGIVLLNS-GG-N----------- 144 (292)
T ss_pred HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCch------hHHHHHHHHHHhHHHHhc-Cc-c-----------
Confidence 999999 9999999999999999999999985 6999998 599999999999988752 11 1
Q ss_pred CCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccc
Q 016399 181 QPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDA 260 (390)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (390)
......|++++++++++||.|.+..|+..++ ++...+.+++..+.+.+.+.....+....
T Consensus 145 -----------------~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 204 (292)
T PRK11272 145 -----------------LSGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLT- 204 (292)
T ss_pred -----------------cccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCccc-
Confidence 1122479999999999999999999996543 24556778888888777766654332211
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhhe
Q 016399 261 WIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLV 340 (390)
Q Consensus 261 ~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~ 340 (390)
...+...|..+++.+++++++++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+++.
T Consensus 205 -~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~ 283 (292)
T PRK11272 205 -ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLV 283 (292)
T ss_pred -ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH
Confidence 1124467889999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred eecC
Q 016399 341 LWGK 344 (390)
Q Consensus 341 ~~~~ 344 (390)
.+.+
T Consensus 284 ~~~~ 287 (292)
T PRK11272 284 TLGK 287 (292)
T ss_pred HHHH
Confidence 6543
No 3
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=100.00 E-value=6e-31 Score=246.68 Aligned_cols=279 Identities=16% Similarity=0.232 Sum_probs=216.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 016399 23 HLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGF 102 (390)
Q Consensus 23 ~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 102 (390)
.+++++++++||.++++.|...+ +++|..+.++|+.++.+.++++.. + ++ .++ ......|++.....+.+
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~-~~~p~~~~~~R~~~a~~~l~~~~~--~-~~---~~~---~~~~~~g~~~~~~~~~~ 75 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLH-NMPPLMLAGLRFMLVAFPAIFFVA--R-PK---VPL---NLLLGYGLTISFGQFAF 75 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHHHhc--C-CC---Cch---HHHHHHHHHHHHHHHHH
Confidence 46688999999999999999998 599999999999998776655442 1 11 222 23444566545566667
Q ss_pred HHHhccc-CCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCCCCCC
Q 016399 103 YLLGLEN-TSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQ 181 (390)
Q Consensus 103 ~~~al~~-~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 181 (390)
++.++++ .+++.++++.++.|+++.+++++++|||++. .++++++++++|+.++.. ++...
T Consensus 76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~------~~~~~~~l~~~Gv~ll~~-~~~~~----------- 137 (299)
T PRK11453 76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQG------KQLAGIALAIFGVLVLIE-DSLNG----------- 137 (299)
T ss_pred HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcH------HHHHHHHHHHHhHHHhcc-ccCCC-----------
Confidence 7889988 5789999999999999999999999999998 599999999999998862 11110
Q ss_pred CCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCch--hHHHHHHHHHHHHHHHHHHHHhcccc-
Q 016399 182 PDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPAR--LSVTAYTCFFGLIQFMIIAAIFERNL- 258 (390)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~- 258 (390)
......|++++++++++|+.|.+++|+..++.+++ .....+....+.+.........+.+.
T Consensus 138 ----------------~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (299)
T PRK11453 138 ----------------QHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSAT 201 (299)
T ss_pred ----------------cchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchh
Confidence 11224699999999999999999999976655422 23344444444443433333333221
Q ss_pred --cchhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHH
Q 016399 259 --DAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVG 336 (390)
Q Consensus 259 --~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~g 336 (390)
..+...+...|..+++.++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++|++|
T Consensus 202 ~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~g 281 (299)
T PRK11453 202 MIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAG 281 (299)
T ss_pred hhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHH
Confidence 112223456788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhheeecCc
Q 016399 337 LYLVLWGKS 345 (390)
Q Consensus 337 v~l~~~~~~ 345 (390)
+++..+.++
T Consensus 282 v~l~~~~~~ 290 (299)
T PRK11453 282 LYINVFGLR 290 (299)
T ss_pred HHHHhcchh
Confidence 998876554
No 4
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.98 E-value=2.5e-30 Score=242.13 Aligned_cols=281 Identities=14% Similarity=0.100 Sum_probs=210.3
Q ss_pred ccCccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCC---CCCHHHHHHHHH
Q 016399 14 CSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERP---AMTLNFALQFIL 90 (390)
Q Consensus 14 ~~~~~~~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~---~~~~~~~~~~~~ 90 (390)
|+|.++.+|++++++++++||..+++.|.. + +++|.++.++|+.++.++++++...+++++.. ..+++++. ...
T Consensus 1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 77 (296)
T PRK15430 1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIF-MLA 77 (296)
T ss_pred CCchhhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHH-HHH
Confidence 345677889999999999999999999985 5 49999999999999998887776543321110 11334433 344
Q ss_pred HHHHHHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcc
Q 016399 91 LALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTI 170 (390)
Q Consensus 91 ~g~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~ 170 (390)
.+.++.+.++.++++|++++++++++++.++.|+++.+++++++|||++. .+++|++++++|++++....
T Consensus 78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~------~~~~g~~l~~~Gv~li~~~~---- 147 (296)
T PRK15430 78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRR------MQWLAVILAICGVLVQLWTF---- 147 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcH------HHHHHHHHHHHHHHHHHHHc----
Confidence 66676889999999999999999999999999999999999999999999 59999999999999986211
Q ss_pred cCCCCCCCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCC-chhHHHHHHHHHHHHHHHH
Q 016399 171 YSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMI 249 (390)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~ 249 (390)
+.. .+++++++++||.|.+..|+..++.. +....+.+....+.....+
T Consensus 148 ---------------------------~~~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (296)
T PRK15430 148 ---------------------------GSL----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFA 196 (296)
T ss_pred ---------------------------CCc----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 111 14588899999999999888643321 1222333333333322211
Q ss_pred HHHHhcccccchhccCCch-HHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHH
Q 016399 250 IAAIFERNLDAWIFHNGGE-VFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGII 328 (390)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~-~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~i 328 (390)
. .......+. .++.. +..+++.|+ .+.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++
T Consensus 197 ~---~~~~~~~~~-~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~ 271 (296)
T PRK15430 197 I---ADSSTSHMG-QNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMV 271 (296)
T ss_pred H---ccCCccccc-CCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 1 111111111 12222 333444455 58899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhheeec
Q 016399 329 GAVLIVVGLYLVLWG 343 (390)
Q Consensus 329 G~~li~~gv~l~~~~ 343 (390)
|+++|++|+.+....
T Consensus 272 G~~lI~~~~~v~~~~ 286 (296)
T PRK15430 272 TFAFIWVALAIFVMD 286 (296)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999888776643
No 5
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.97 E-value=2.2e-30 Score=242.38 Aligned_cols=284 Identities=13% Similarity=0.112 Sum_probs=212.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHH
Q 016399 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA 98 (390)
Q Consensus 19 ~~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 98 (390)
+.+++++++++.++||.+++..|...+ +++|..+.++|+.++.++++++.. +++ .++++ +.....+.++...
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~-~~~P~~~~~~R~~~a~l~l~~~~~---~~~---~~~~~-~~~~~~~~l~~~~ 73 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVSE-SLGPVGGAAMIYSVSGLLLLLTVG---FPR---LRQFP-KRYLLAGGLLFVS 73 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHc-cCChHHHHHHHHHHHHHHHHHHcc---ccc---ccccc-HHHHHHHhHHHHH
Confidence 345688999999999999999999999 599999999999999999876631 111 11122 2234445556777
Q ss_pred HHHHHHHhccc----CCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCC
Q 016399 99 NQGFYLLGLEN----TSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPA 174 (390)
Q Consensus 99 ~~~~~~~al~~----~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~ 174 (390)
++.+++.++++ .+++.++++.++.|+++.+++++++|||+++ .+++|++++++|++++... +...+. .
T Consensus 74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~------~~~~g~~l~~~Gv~li~~~-~~~~~~-~ 145 (295)
T PRK11689 74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANW------LLIPGLLLALAGVAWVLGG-DNGLSL-A 145 (295)
T ss_pred HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccH------HHHHHHHHHHHhHhheecC-Cccchh-h
Confidence 88788877754 5677888999999999999999999999998 5999999999999998721 110000 0
Q ss_pred CCCCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHh
Q 016399 175 PPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIF 254 (390)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (390)
+ .. .+ ..+...|++++++++++||.|.++.|+..++.+ +.... ...+.+.+.+.....
T Consensus 146 -~---~~------------~~--~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~---~~~~~~~l~~~~~~~ 203 (295)
T PRK11689 146 -E---LI------------NN--IASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITLF---FILTALALWIKYFLS 203 (295)
T ss_pred -h---hh------------hc--cccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhHH---HHHHHHHHHHHHHHh
Confidence 0 00 00 112246999999999999999999999876654 55432 222333333333322
Q ss_pred cccccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHH
Q 016399 255 ERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIV 334 (390)
Q Consensus 255 ~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~ 334 (390)
+.. . ...+...|..+++.++ +++++|.+|++++|+.++++++.+.+++|+++++++++++||++++.+++|+++|+
T Consensus 204 ~~~--~-~~~~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~ 279 (295)
T PRK11689 204 PQP--A-MVFSLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVT 279 (295)
T ss_pred cCc--c-ccCCHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 211 1 1123456777777775 69999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhheeecC
Q 016399 335 VGLYLVLWGK 344 (390)
Q Consensus 335 ~gv~l~~~~~ 344 (390)
.|+++.....
T Consensus 280 ~gv~~~~~~~ 289 (295)
T PRK11689 280 AGSLLCWLAT 289 (295)
T ss_pred HhHHHHhhhH
Confidence 9998876533
No 6
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.97 E-value=6.9e-30 Score=238.75 Aligned_cols=276 Identities=11% Similarity=0.123 Sum_probs=219.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHH
Q 016399 18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGIT 97 (390)
Q Consensus 18 ~~~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 97 (390)
++..++.+++++++.|+.++++.|...++ ++|..+.++|++++.++++++...+ + .+.+++++...+..|++ ..
T Consensus 9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~~--~--~~~~~~~~~~~~~~g~~-~~ 82 (293)
T PRK10532 9 PVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKPW--R--LRFAKEQRLPLLFYGVS-LG 82 (293)
T ss_pred ccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhHH--h--ccCCHHHHHHHHHHHHH-HH
Confidence 35778999999999999999999999994 9999999999999998888765321 1 13456777788888887 57
Q ss_pred HHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCC
Q 016399 98 ANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPL 177 (390)
Q Consensus 98 ~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~ 177 (390)
..+.++++++++++++.++++..+.|+++.+++. |+.. +..++.++++|+.++.. .+.+.
T Consensus 83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--------~~~~~~i~~~Gv~li~~-~~~~~------- 142 (293)
T PRK10532 83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--------DFVWVVLAVLGLWFLLP-LGQDV------- 142 (293)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--------HHHHHHHHHHHHheeee-cCCCc-------
Confidence 7788999999999999999999999999988763 3221 34557788999988762 12111
Q ss_pred CCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhccc
Q 016399 178 NQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERN 257 (390)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (390)
+.....|++++++++++|+.|.+..|+..++.+ +... .+...++.+++.+.....+..
T Consensus 143 --------------------~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~~ 200 (293)
T PRK10532 143 --------------------SHVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQAGE 200 (293)
T ss_pred --------------------ccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHccCc
Confidence 122347999999999999999999999877664 6555 445556666666555533211
Q ss_pred ccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHh
Q 016399 258 LDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGL 337 (390)
Q Consensus 258 ~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv 337 (390)
. ..+...|..+++.|+++++++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++|++|+
T Consensus 201 -~---~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~ 276 (293)
T PRK10532 201 -A---LWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAAS 276 (293)
T ss_pred -c---cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHH
Confidence 1 113344556789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hheeecCc
Q 016399 338 YLVLWGKS 345 (390)
Q Consensus 338 ~l~~~~~~ 345 (390)
+...+..+
T Consensus 277 ~~~~~~~~ 284 (293)
T PRK10532 277 MGSTLTIR 284 (293)
T ss_pred HHHHhcCC
Confidence 98875543
No 7
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.97 E-value=7.8e-30 Score=234.65 Aligned_cols=258 Identities=20% Similarity=0.254 Sum_probs=218.3
Q ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Q 016399 33 YAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSP 112 (390)
Q Consensus 33 ~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~ 112 (390)
||.+++..|...+...++....+.|...+.+++.++...+ .+++++......|.++..+++.+++.|++++++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 7899999999987668899999999998888877765322 345677788888988889999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCCCCCCCCCcccccccc
Q 016399 113 TFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLS 192 (390)
Q Consensus 113 ~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (390)
++++++.++.|+++.+++++++|||+++ .+++|++++++|+.++.. ++ .
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~------~~~~gi~i~~~Gv~li~~-~~-~----------------------- 122 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRK------LVLLAAVLGLAGAVLLLS-DG-N----------------------- 122 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcH------HHHHHHHHHHHhHHhhcc-CC-c-----------------------
Confidence 9999999999999999999999999998 599999999999999862 22 1
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCC-chhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHH
Q 016399 193 LGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFS 271 (390)
Q Consensus 193 ~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (390)
......|++++++++++|+.+.++.|+..++.+ ++.....+++..+.+++.+.....++.. . .+...|..
T Consensus 123 -----~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~---~~~~~~~~ 193 (260)
T TIGR00950 123 -----LSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-Q---ALSLQWGA 193 (260)
T ss_pred -----ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-C---cchHHHHH
Confidence 223357999999999999999999999877664 2334555678888887777766533221 1 14456777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHh
Q 016399 272 ILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGL 337 (390)
Q Consensus 272 l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv 337 (390)
+++.++++++++|.+|++++++.++.+++.+.+++|+++++++++++||+++..+++|+++++.|+
T Consensus 194 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 194 LLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 889999989999999999999999999999999999999999999999999999999999999986
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.96 E-value=7.3e-28 Score=226.31 Aligned_cols=282 Identities=15% Similarity=0.107 Sum_probs=219.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 016399 23 HLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGF 102 (390)
Q Consensus 23 ~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 102 (390)
.++.++...+-....+..|.+.+....|..++++|+.++.+.+.+... .+.+++++.++++++.++..|+++ ++++.+
T Consensus 4 ~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~ 81 (302)
T TIGR00817 4 GLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSALLKLLLPVAIVH-TIGHVT 81 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHH-HHHHHH
Confidence 345556666666667889999984367999999999998877655521 122233457789999999999995 888999
Q ss_pred HHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCCCCCCC
Q 016399 103 YLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQP 182 (390)
Q Consensus 103 ~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~ 182 (390)
.+.++++++++.++++.++.|+++.+++++++|||++. .++.|++++++|+.+.. .++
T Consensus 82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~------~~~~~l~l~~~Gv~l~~--~~~-------------- 139 (302)
T TIGR00817 82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPS------TLWLSLLPIVGGVALAS--DTE-------------- 139 (302)
T ss_pred HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcH------HHHHHHHHHHHHHhhhc--CCc--------------
Confidence 99999999999999999999999999999999999998 59999999999998753 111
Q ss_pred CCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh--hCCchhHHHHHHHHHHHHHHHHHHHHhccccc-
Q 016399 183 DSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLK--KYPARLSVTAYTCFFGLIQFMIIAAIFERNLD- 259 (390)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 259 (390)
......|++++++++++|+++.++.|+..+ +. ++...+.+++..+.+.+.+.....+....
T Consensus 140 ---------------~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 203 (302)
T TIGR00817 140 ---------------LSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFL 203 (302)
T ss_pred ---------------ccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHH
Confidence 122346999999999999999999999877 55 58899999999999998888776543211
Q ss_pred --chhc----cCCch-HHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHH
Q 016399 260 --AWIF----HNGGE-VFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVL 332 (390)
Q Consensus 260 --~~~~----~~~~~-~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~l 332 (390)
.+.. ..... +...+..+..+....+.++++++++.++++.+++.+++|+++++++++++||+++..+++|+++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~l 283 (302)
T TIGR00817 204 PHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGI 283 (302)
T ss_pred HHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHH
Confidence 1100 01111 1112222222233333466689999999999999999999999999999999999999999999
Q ss_pred HHHHhhheeecC
Q 016399 333 IVVGLYLVLWGK 344 (390)
Q Consensus 333 i~~gv~l~~~~~ 344 (390)
++.|++++.+.|
T Consensus 284 il~Gv~l~~~~k 295 (302)
T TIGR00817 284 AIAGVFLYSRVK 295 (302)
T ss_pred HHHHHHHHHHHh
Confidence 999999988644
No 9
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.96 E-value=7.7e-27 Score=217.03 Aligned_cols=273 Identities=13% Similarity=0.173 Sum_probs=202.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhh-cccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 016399 23 HLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLE-KKERPAMTLNFALQFILLALVGITANQG 101 (390)
Q Consensus 23 ~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 101 (390)
.+..++++++|+..++..|...++ -++. .+++...+.+++.++...+. +..++..+++ ++.....+.++...++.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 78 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK-EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPAT-FWLLLAISAVANMVYFL 78 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc-hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchh-hHHHHHHHHHHHHHHHH
Confidence 567899999999999999976653 3443 46777777777777765532 2222333334 44455555556788999
Q ss_pred HHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCCCCCC
Q 016399 102 FYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQ 181 (390)
Q Consensus 102 ~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 181 (390)
+++.|+++.+++.++++.++.|+++.+++++++|||++. .+++|+.+++.|+.++.. ++ .
T Consensus 79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~------~~~~g~~~~~~Gv~ll~~-~~-~------------ 138 (281)
T TIGR03340 79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSP------LAWLGILIITLGLLVLGL-SR-F------------ 138 (281)
T ss_pred HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCH------HHHHHHHHHHHHHHHHhc-cc-c------------
Confidence 999999999999999999999999999999999999999 699999999999998862 11 1
Q ss_pred CCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhH----HHHHHHHHHHHHHHHHHHHhccc
Q 016399 182 PDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLS----VTAYTCFFGLIQFMIIAAIFERN 257 (390)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 257 (390)
......|+.++++++++|+.|.++.|+..++.+ +.. ...+.+....+...+.....+..
T Consensus 139 ----------------~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (281)
T TIGR03340 139 ----------------AQHRRKAYAWALAAALGTAIYSLSDKAAALGVP-AFYSALGYLGIGFLAMGWPFLLLYLKRHGR 201 (281)
T ss_pred ----------------cccchhHHHHHHHHHHHHHHhhhhccccccchh-cccccHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 111235788899999999999999887644443 221 12222222211111111111111
Q ss_pred ccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHh
Q 016399 258 LDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGL 337 (390)
Q Consensus 258 ~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv 337 (390)
... .....++.+++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|++++++|+
T Consensus 202 --~~~-~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv 278 (281)
T TIGR03340 202 --SMF-PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGL 278 (281)
T ss_pred --chh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhH
Confidence 111 12234556677888889999999999999999999999999999999999999999999999999999999998
Q ss_pred hh
Q 016399 338 YL 339 (390)
Q Consensus 338 ~l 339 (390)
++
T Consensus 279 ~l 280 (281)
T TIGR03340 279 VV 280 (281)
T ss_pred Hh
Confidence 75
No 10
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.95 E-value=2e-25 Score=213.03 Aligned_cols=285 Identities=15% Similarity=0.159 Sum_probs=225.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHHHhhhhcccCCCC--CHHHHHHHHHHHHH
Q 016399 18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGIS-KLVFPVYRNIIAFLLLLPFAYFLEKKERPAM--TLNFALQFILLALV 94 (390)
Q Consensus 18 ~~~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~ 94 (390)
.+.+..++++....+-.......|.+++. ++ |..++.+|++++.+++..+.... .++.++. .+++++..+..|++
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~gl~ 123 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQGLC 123 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHHHH
Confidence 35667788888888888889999999994 99 99999999999988765553322 2222323 35577889999999
Q ss_pred HHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCC
Q 016399 95 GITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPA 174 (390)
Q Consensus 95 ~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~ 174 (390)
+... +...+.|+++++++.++++..+.|+++++++++++|||++. .++.++++++.|+.+... ++
T Consensus 124 ~~~~-~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~------~~~l~l~l~v~Gv~l~~~--~~------ 188 (350)
T PTZ00343 124 HLFV-HFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNL------YAYLSLIPIVGGVALASV--KE------ 188 (350)
T ss_pred HHHH-HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccH------HHHHHHHHHHHHHHheec--cc------
Confidence 7655 55577999999999999999999999999999999999998 599999999999999862 11
Q ss_pred CCCCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCC------chhHHHHHHHHHHHHHHH
Q 016399 175 PPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP------ARLSVTAYTCFFGLIQFM 248 (390)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~------~~~~~~~~~~~~~~~~~~ 248 (390)
......|++++++|+++|+.+.++.|+..++.+ ++.....++...+.++++
T Consensus 189 -----------------------~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 245 (350)
T PTZ00343 189 -----------------------LHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISL 245 (350)
T ss_pred -----------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHH
Confidence 122357999999999999999999999887542 244456666888888888
Q ss_pred HHHHHhcccc--cchh----ccCCchHHHHHHHHHHHHHHHHHHHHH----HHhcCCceeeeehhhhHHHHHHHHHHHHh
Q 016399 249 IIAAIFERNL--DAWI----FHNGGEVFSILYAGVVASGIAFAVQIW----CIDRGGPVFVAVYQPVQTLVVAIMASFAL 318 (390)
Q Consensus 249 ~~~~~~~~~~--~~~~----~~~~~~~~~l~~~gi~~~~~~~~~~~~----a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ 318 (390)
|.....+... ..+. ......+..+++ .++.+++++++|+. +++++++.+.++..+++|+++++++++++
T Consensus 246 p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ 324 (350)
T PTZ00343 246 PLVLFFEGKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIF 324 (350)
T ss_pred HHHHHHhhHHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHh
Confidence 8877554321 1110 001112233444 34558899999995 99999999999999999999999999999
Q ss_pred CCCchhhHHHHHHHHHHHhhheeec
Q 016399 319 GEEFYLGGIIGAVLIVVGLYLVLWG 343 (390)
Q Consensus 319 ~e~~~~~~~iG~~li~~gv~l~~~~ 343 (390)
||++++.+++|+++++.|++++.+.
T Consensus 325 ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 325 QTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred CCCCchHhHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999988754
No 11
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.95 E-value=5.8e-25 Score=204.86 Aligned_cols=298 Identities=17% Similarity=0.220 Sum_probs=227.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHHHhhhhcc-cCCCCCHHHHHHHHHHHHHHHH
Q 016399 20 LQLHLAMVALQFGYAGFHVVSRAALNMGIS-KLVFPVYRNIIAFLLLLPFAYFLEKK-ERPAMTLNFALQFILLALVGIT 97 (390)
Q Consensus 20 ~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~ 97 (390)
.+..+.-=..+++-......+....+.+.+ |....++.+..-.++..+...+++++ +.....+++|+.+++.+++- .
T Consensus 12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D-v 90 (334)
T PF06027_consen 12 WIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD-V 90 (334)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH-H
Confidence 444555555556666667777776665555 77778888887777777665554432 22333456677778888885 6
Q ss_pred HHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCC
Q 016399 98 ANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPL 177 (390)
Q Consensus 98 ~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~ 177 (390)
..+.+.+.|++|++.+.++++.++..+++++++++++|||.++ .+++|+++++.|+.++...+....++.
T Consensus 91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~------~~~~gv~i~i~Gv~lv~~sD~~~~~~~---- 160 (334)
T PF06027_consen 91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSW------FHILGVLICIAGVVLVVVSDVLSGSDS---- 160 (334)
T ss_pred HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhH------HHHHHHHHHHhhhhheeeecccccccC----
Confidence 7888999999999999999999999999999999999999999 799999999999999874332211100
Q ss_pred CCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhccc
Q 016399 178 NQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERN 257 (390)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (390)
.+ +.+..+|++++++++++||.++++.++..++.+ ......+.-+++.++..+...+.+..
T Consensus 161 ----~~--------------~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~ 221 (334)
T PF06027_consen 161 ----SS--------------GSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERS 221 (334)
T ss_pred ----CC--------------CCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehh
Confidence 01 456679999999999999999999999999885 77888888888888888877766543
Q ss_pred c-cchhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHH
Q 016399 258 L-DAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVG 336 (390)
Q Consensus 258 ~-~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~g 336 (390)
. ...+. +...+..++. ..++...-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++|++|
T Consensus 222 ~i~~~~w-~~~~~~~~v~-~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG 299 (334)
T PF06027_consen 222 GIESIHW-TSQVIGLLVG-YALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIG 299 (334)
T ss_pred hhhccCC-ChhhHHHHHH-HHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHH
Confidence 1 11211 2222322222 2335677788888899999999999999999999999999999999999999999999999
Q ss_pred hhheeecCcchhh
Q 016399 337 LYLVLWGKSEEKK 349 (390)
Q Consensus 337 v~l~~~~~~~~~~ 349 (390)
.++++..+.+..+
T Consensus 300 ~vvy~~~~~~~~~ 312 (334)
T PF06027_consen 300 FVVYNLAESPEEE 312 (334)
T ss_pred hheEEccCCcccc
Confidence 9999876655443
No 12
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.94 E-value=1.1e-24 Score=200.05 Aligned_cols=248 Identities=12% Similarity=0.092 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhccc-----CCCCCHHH-HHHHHHHHHH
Q 016399 21 QLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKE-----RPAMTLNF-ALQFILLALV 94 (390)
Q Consensus 21 ~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~~-~~~~~~~g~~ 94 (390)
+|++++++++++||.++++.|. .+ +++|.+++++|+.++.++++++...+++++ .+..++++ +......|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 4789999999999999999998 45 499999999999999988877654433211 11122233 3445666666
Q ss_pred HHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCC
Q 016399 95 GITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPA 174 (390)
Q Consensus 95 ~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~ 174 (390)
..+++.++++|++++++++++++.++.|+++.+++++++|||++. .++++++++++|++++...++
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~------~~~l~~~~~~~Gv~li~~~~~------- 145 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISR------FQFIAVIIATLGVISNIVLKG------- 145 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCH------HHHHHHHHHHHHHHHHHHHcC-------
Confidence 678999999999999999999999999999999999999999999 599999999999998863111
Q ss_pred CCCCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHh
Q 016399 175 PPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIF 254 (390)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (390)
+.. .++++++++|+.|.+..|+..++ + ....... .........+.....
T Consensus 146 -----------------------~~~-----~~~l~aa~~~a~~~i~~~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~~~ 194 (256)
T TIGR00688 146 -----------------------SLP-----WEALVLAFSFTAYGLIRKALKNT-D-LAGFCLE-TLSLMPVAIYYLLQT 194 (256)
T ss_pred -----------------------Cch-----HHHHHHHHHHHHHHHHHhhcCCC-C-cchHHHH-HHHHHHHHHHHHHHh
Confidence 111 35788999999999999886442 2 2222221 112222222121111
Q ss_pred cccccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHH
Q 016399 255 ERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFA 317 (390)
Q Consensus 255 ~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~ 317 (390)
+ ............|..+++.|++ +.++|.++++++++.++++++++.+++|+++.+++.++
T Consensus 195 ~-~~~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 195 D-FATVQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred c-cCcccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 1 1110111122368888888886 89999999999999999999999999999999999764
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.92 E-value=8.3e-23 Score=190.46 Aligned_cols=281 Identities=23% Similarity=0.324 Sum_probs=215.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHH
Q 016399 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA 98 (390)
Q Consensus 19 ~~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 98 (390)
...+..+.++..+.|+......|...+...++....+.|..++.++..+.....+ .... ...+.+......+.++...
T Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~ 82 (292)
T COG0697 5 LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEP-RGLR-PALRPWLLLLLLALLGLAL 82 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhc-cccc-ccccchHHHHHHHHHHHHH
Confidence 4567888899999999999999998883256666666699888888443332211 1111 1112245667777777899
Q ss_pred HHHHHHHhcccCCcccccccccchhHHHHHHHH-HHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCC
Q 016399 99 NQGFYLLGLENTSPTFASAIQNSVPAITFLMAA-IFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPL 177 (390)
Q Consensus 99 ~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~-l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~ 177 (390)
++.+++.++++++++.++++.++.|+++.++++ ++++||++. .++.++.++++|++++...+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~------~~~~~~~~~~~Gv~lv~~~~~~--------- 147 (292)
T COG0697 83 PFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSL------LQILGILLALAGVLLILLGGGG--------- 147 (292)
T ss_pred HHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcH------HHHHHHHHHHHhHHheecCCCc---------
Confidence 999999999999999999999999999999997 676999999 6999999999999999732111
Q ss_pred CCCCCCCcccccccccCCCCCCc-hhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHH-HHHHHHHHHHHHHHHHhc
Q 016399 178 NQIQPDSLTSTIFLSLGDAKGKN-WTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTA-YTCFFGLIQFMIIAAIFE 255 (390)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~-~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 255 (390)
... ...|++++++++++++.+.+..|+.. +.+ +..... +.+. ............
T Consensus 148 --------------------~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~--~~~~~~~~~~~~ 203 (292)
T COG0697 148 --------------------GGILSLLGLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLL--LALLLLLLFFLS 203 (292)
T ss_pred --------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHH--HHHHHHHHHHhc
Confidence 111 46899999999999999999999877 443 454554 3333 111111111111
Q ss_pred ccccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHH
Q 016399 256 RNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVV 335 (390)
Q Consensus 256 ~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~ 335 (390)
.. . .......+..+.+.|++++++++.++++++++.++..++.+.+++|+++.++++++++|+++..+++|+.+++.
T Consensus 204 ~~-~--~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~ 280 (292)
T COG0697 204 GF-G--APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVL 280 (292)
T ss_pred cc-c--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 11 1 12244568888999999888999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhheeec
Q 016399 336 GLYLVLWG 343 (390)
Q Consensus 336 gv~l~~~~ 343 (390)
|+.+...+
T Consensus 281 g~~l~~~~ 288 (292)
T COG0697 281 GVLLASLR 288 (292)
T ss_pred HHHHHhcc
Confidence 99988765
No 14
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.92 E-value=1.1e-22 Score=180.62 Aligned_cols=280 Identities=15% Similarity=0.147 Sum_probs=228.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccC---CCCCHHHHHHHHHHHHHH
Q 016399 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKER---PAMTLNFALQFILLALVG 95 (390)
Q Consensus 19 ~~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~ 95 (390)
..+|++..+.+.++||..+...|.... .++.++...|..-+.++++.+....++++. ...+++.+..+.+.+++
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll~~--~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l- 81 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLLEP--LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL- 81 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-
Confidence 467999999999999999999999644 899999999999999998877666554332 12345566666777776
Q ss_pred HHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCC
Q 016399 96 ITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAP 175 (390)
Q Consensus 96 ~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~ 175 (390)
+..++..|.+|..+...-+++.-++..|++..+++++|+|||+++ .|++++.++.+||...+...|
T Consensus 82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~------~Q~iAV~lA~~GV~~~~~~~g-------- 147 (293)
T COG2962 82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSR------LQWIAVGLAAAGVLIQTWLLG-------- 147 (293)
T ss_pred HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccH------HHHHHHHHHHHHHHHHHHHcC--------
Confidence 889999999999999999999999999999999999999999998 899999999999999886544
Q ss_pred CCCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhc
Q 016399 176 PLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFE 255 (390)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (390)
+.+|. ++.-+++|+.|..+-|+ .+ . |..+-...-...-.+..+...++.+
T Consensus 148 ----------------------~lpwv-----al~la~sf~~Ygl~RK~-~~-v-~a~~g~~lE~l~l~p~al~yl~~l~ 197 (293)
T COG2962 148 ----------------------SLPWV-----ALALALSFGLYGLLRKK-LK-V-DALTGLTLETLLLLPVALIYLLFLA 197 (293)
T ss_pred ----------------------CCcHH-----HHHHHHHHHHHHHHHHh-cC-C-chHHhHHHHHHHHhHHHHHHHHHHh
Confidence 34453 77788999999997444 22 2 3455555555555666665555554
Q ss_pred ccccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHH
Q 016399 256 RNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVV 335 (390)
Q Consensus 256 ~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~ 335 (390)
...+.....++..+..++..|.+ +.+...++..+.++++-+..+.++|.+|..-.+++.+++||+++..+++..++|.+
T Consensus 198 ~~~~~~~~~~~~~~~LLv~aG~v-TavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~ 276 (293)
T COG2962 198 DSGQFLQQNANSLWLLLVLAGLV-TAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWL 276 (293)
T ss_pred cCchhhhcCCchHHHHHHHhhHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 44321222456677888888886 99999999999999999999999999999999999999999999999999999999
Q ss_pred HhhheeecCcc
Q 016399 336 GLYLVLWGKSE 346 (390)
Q Consensus 336 gv~l~~~~~~~ 346 (390)
|+.++.+..-+
T Consensus 277 aL~l~~~d~l~ 287 (293)
T COG2962 277 ALALFSIDGLY 287 (293)
T ss_pred HHHHHHHHHHH
Confidence 99988765443
No 15
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.91 E-value=2.5e-22 Score=173.54 Aligned_cols=274 Identities=14% Similarity=0.132 Sum_probs=226.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 016399 22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG 101 (390)
Q Consensus 22 ~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 101 (390)
.+++++.+++..=....+.|..+.. +.+...+.+|..++.++++++..-+ +.+.+++++......|+. ...-|.
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RPw----r~r~~~~~~~~~~~yGvs-Lg~MNl 86 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFRPW----RRRLSKPQRLALLAYGVS-LGGMNL 86 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhHH----HhccChhhhHHHHHHHHH-HHHHHH
Confidence 5888888888888888899999995 9999999999999999998886332 245788999999999998 578888
Q ss_pred HHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCCCCCC
Q 016399 102 FYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQ 181 (390)
Q Consensus 102 ~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 181 (390)
+||.+++..|.+.+..+.++.|+.+.+++-=- . .+.+.+.+++.|+.++.- .++..
T Consensus 87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~sRr------~------~d~vwvaLAvlGi~lL~p-~~~~~----------- 142 (292)
T COG5006 87 LFYLSIERIPLGIAVAIEFTGPLAVALLSSRR------L------RDFVWVALAVLGIWLLLP-LGQSV----------- 142 (292)
T ss_pred HHHHHHHhccchhhhhhhhccHHHHHHHhccc------h------hhHHHHHHHHHHHHhhee-ccCCc-----------
Confidence 99999999999999999999999888765311 2 366778889999988862 22211
Q ss_pred CCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccch
Q 016399 182 PDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAW 261 (390)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (390)
......|..+++.++.||++|.+..||..+..+ .-......+.++.++.+|+...... .
T Consensus 143 ----------------~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag----~ 201 (292)
T COG5006 143 ----------------WSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAG----P 201 (292)
T ss_pred ----------------CcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcc----h
Confidence 334468999999999999999999999887654 5667788888899999988884332 2
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhhee
Q 016399 262 IFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVL 341 (390)
Q Consensus 262 ~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~ 341 (390)
....+.-....+.++++++.+.|.+-..++++.+....+.+..++|.++.+.+++++||.+|+.||.|+++|+.+..-..
T Consensus 202 ~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~ 281 (292)
T COG5006 202 ALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGST 281 (292)
T ss_pred hhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccc
Confidence 22255556677889999999999999999999999999999999999999999999999999999999999999987555
Q ss_pred ecCcc
Q 016399 342 WGKSE 346 (390)
Q Consensus 342 ~~~~~ 346 (390)
+..+|
T Consensus 282 lt~~~ 286 (292)
T COG5006 282 LTARK 286 (292)
T ss_pred cccCC
Confidence 44433
No 16
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.89 E-value=3.7e-24 Score=185.89 Aligned_cols=291 Identities=18% Similarity=0.151 Sum_probs=213.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHH
Q 016399 18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGIT 97 (390)
Q Consensus 18 ~~~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 97 (390)
+-.+|.++..++ .++.+..++.+..++ .+|.+..-.|+++-.++-.+-..+.+... ..+.....++++.|+.|..
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v--~gp~g~R~~LiLRg~mG~t 109 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPV--IGPEGKRKWLILRGFMGFT 109 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeee--ecCCCcEEEEEeehhhhhh
Confidence 445678888888 555666666666665 69999999997777776666544433222 1233444667888988754
Q ss_pred HHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCC
Q 016399 98 ANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPL 177 (390)
Q Consensus 98 ~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~ 177 (390)
.....|+|++|.+.+.++++.+..|++|.+++++++||+.+. .+.++..+.+.|+++++ +.+.......+.
T Consensus 110 -gvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~------~eaL~s~itl~GVVLIv--RPpFlFG~~t~g 180 (346)
T KOG4510|consen 110 -GVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTK------FEALGSLITLLGVVLIV--RPPFLFGDTTEG 180 (346)
T ss_pred -HHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcH------HHHHHHHHhhheEEEEe--cCCcccCCCccc
Confidence 555778899999999999999999999999999999999998 89999999999999997 333321111000
Q ss_pred CCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhccc
Q 016399 178 NQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERN 257 (390)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (390)
+...+. .....|.+.++.++++-|--.++.|+..|+.+..+.+..+ ..++.+..++.....+ .
T Consensus 181 ---------~~~s~~------~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf-~~i~lV~s~I~~~~ig-~ 243 (346)
T KOG4510|consen 181 ---------EDSSQV------EYDIPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYF-SLITLVVSLIGCASIG-A 243 (346)
T ss_pred ---------cccccc------cccCCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHH-HHHHHHHHHHHHhhcc-c
Confidence 001111 1223567888889888888888889988887643433333 3344444444333222 1
Q ss_pred ccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHh
Q 016399 258 LDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGL 337 (390)
Q Consensus 258 ~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv 337 (390)
-.++ ..+.+|+.++.+|++ +++++.+...++|+..+..+++..+...+++.+++.++|+|.|+++.|.|+++|+.+.
T Consensus 244 -~~lP-~cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~ 320 (346)
T KOG4510|consen 244 -VQLP-HCGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSST 320 (346)
T ss_pred -eecC-ccccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhH
Confidence 1222 245677888888997 8999999999999999999999999999999999999999999999999999999887
Q ss_pred hheee
Q 016399 338 YLVLW 342 (390)
Q Consensus 338 ~l~~~ 342 (390)
+....
T Consensus 321 v~~a~ 325 (346)
T KOG4510|consen 321 VWVAL 325 (346)
T ss_pred HHHHH
Confidence 76553
No 17
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.87 E-value=1.1e-20 Score=176.00 Aligned_cols=274 Identities=13% Similarity=0.079 Sum_probs=204.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 016399 22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG 101 (390)
Q Consensus 22 ~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 101 (390)
+++++++++++||++++..|... +.++.++. |..++.+++..+....+..+ ...++.+..-+..|++ ....+.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~-w~ig~~ 74 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAF-WALGQI 74 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHH-HHhhhh
Confidence 57899999999999999999865 47776664 77777777766655443211 1224444445555555 788999
Q ss_pred HHHHhcccCCccccccccc-chhHHHHHHHHHHhhccccccccCcccc----chhHHHHHhhhhHHhhhcCCcccCCCCC
Q 016399 102 FYLLGLENTSPTFASAIQN-SVPAITFLMAAIFRIEKVRLDRKDGIAK----VVGTLFCVAGATVITLYKGPTIYSPAPP 176 (390)
Q Consensus 102 ~~~~al~~~~~~~~~il~~-~~pi~~~ila~l~l~e~~~~~~~~~~~~----~~g~~l~~~Gv~li~~~~~~~~~~~~~~ 176 (390)
+|+.++++++.+.+..+.+ +.++++.+.+.+++||+.+.+ + ++|++++++|++++...+++...
T Consensus 75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~~----- 143 (290)
T TIGR00776 75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSAG----- 143 (290)
T ss_pred hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEeccccccc-----
Confidence 9999999999999999987 899999999999999999884 7 99999999998887522111000
Q ss_pred CCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHH---HHHHHHHHHHHH
Q 016399 177 LNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCF---FGLIQFMIIAAI 253 (390)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 253 (390)
+ .+ ..+...|++++++++++|+.|.+..|.. ++ +|....+.+.. .+.++..+..
T Consensus 144 -----~-----------~~--~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~-- 200 (290)
T TIGR00776 144 -----I-----------KS--EFNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAIGMVIGGIIFNLGH-- 200 (290)
T ss_pred -----c-----------cc--ccchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHHHHHHHHHHHHHHH--
Confidence 0 00 0233579999999999999999999875 34 47777544444 3333222221
Q ss_pred hcccccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHh-cCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHH----H
Q 016399 254 FERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCID-RGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGI----I 328 (390)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~-~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~----i 328 (390)
. .. .++ .+...+..+..|++ ..+++.+|..+.+ +.+++..+.+.+.+|+.+.+++++++||+.+..++ +
T Consensus 201 ~-~~-~~~---~~~~~~~~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~i 274 (290)
T TIGR00776 201 I-LA-KPL---KKYAILLNILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISV 274 (290)
T ss_pred h-cc-cch---HHHHHHHHHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHH
Confidence 1 11 112 12223334448887 8999999999999 99999999999999999999999999999999999 9
Q ss_pred HHHHHHHHhhheee
Q 016399 329 GAVLIVVGLYLVLW 342 (390)
Q Consensus 329 G~~li~~gv~l~~~ 342 (390)
|.++++.|+.+...
T Consensus 275 G~~lIi~~~~l~~~ 288 (290)
T TIGR00776 275 GIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999987653
No 18
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.82 E-value=7.1e-18 Score=158.43 Aligned_cols=281 Identities=15% Similarity=0.185 Sum_probs=213.9
Q ss_pred HHHHHHHHHHh-cCCC--chHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 016399 35 GFHVVSRAALN-MGIS--KLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTS 111 (390)
Q Consensus 35 ~~~~~~k~~~~-~~~~--~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~ 111 (390)
.+.++...... .+.. |..+++.++....++..+.....++ +..++..+..++..+++ ..++..+-+.|++|.+
T Consensus 14 ~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~i~ 89 (303)
T PF08449_consen 14 SYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF---PKSRKIPLKKYAILSFL-FFLASVLSNAALKYIS 89 (303)
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc---cCCCcChHHHHHHHHHH-HHHHHHHHHHHHHhCC
Confidence 33444444443 2233 7788899988888877766654441 22334445666677777 5778889999999999
Q ss_pred cccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCCCCCCCCCccccccc
Q 016399 112 PTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFL 191 (390)
Q Consensus 112 ~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (390)
.....++..+.|+.+++++.+++|+|.+. .++.++++..+|+.+....+......
T Consensus 90 ~p~~~~~ks~~~i~vmi~~~l~~~k~y~~------~~~~~v~li~~Gv~~~~~~~~~~~~~------------------- 144 (303)
T PF08449_consen 90 YPTQIVFKSSKPIPVMILGVLILGKRYSR------RQYLSVLLITIGVAIFTLSDSSSSSS------------------- 144 (303)
T ss_pred hHHHHHHhhhHHHHHHHHHHHhcCccccH------HHHHHHHHHHhhHheeeecccccccc-------------------
Confidence 99999999999999999999997777777 79999999999999987533221110
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCC-chhHHHHHHHHHHHHHHHHHHHH--hcccccc--hhccCC
Q 016399 192 SLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAI--FERNLDA--WIFHNG 266 (390)
Q Consensus 192 ~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~ 266 (390)
...+ ...+..|+++.+++.++.+...+++++..++++ ++.+..++..+++.+..++.... .+...+. +....+
T Consensus 145 ~~~~--~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p 222 (303)
T PF08449_consen 145 SNSS--SFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHP 222 (303)
T ss_pred cccc--cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhH
Confidence 0000 223345999999999999999999999998776 67889999999999888877776 2222111 222233
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecCcc
Q 016399 267 GEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKSE 346 (390)
Q Consensus 267 ~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~~~ 346 (390)
..+..++...+ ++.++..+.++..++.++...+++..++.+++++++.+++++++++.+|+|.++++.|..+..+.++|
T Consensus 223 ~~~~~l~~~s~-~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k 301 (303)
T PF08449_consen 223 SVLLYLLLFSL-TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKK 301 (303)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhcc
Confidence 44445555555 58888888889999999999999999999999999999999999999999999999999998877765
Q ss_pred h
Q 016399 347 E 347 (390)
Q Consensus 347 ~ 347 (390)
+
T Consensus 302 ~ 302 (303)
T PF08449_consen 302 K 302 (303)
T ss_pred C
Confidence 4
No 19
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.81 E-value=1.4e-18 Score=158.41 Aligned_cols=301 Identities=12% Similarity=0.136 Sum_probs=222.6
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CchHHHHHHHHHHHHHHHHHH----hh---hhcccC----------
Q 016399 17 PEKLQLHLAMVALQFGYAGFHVVSRAALNMGI--SKLVFPVYRNIIAFLLLLPFA----YF---LEKKER---------- 77 (390)
Q Consensus 17 ~~~~~~~l~~ll~~~~~~~~~~~~k~~~~~~~--~~~~~~~~r~~~~~l~l~~~~----~~---~~~~~~---------- 77 (390)
++...|++++++..++|-...-+.+...+.+- .|+..++.....-.+-+.++. .+ .+|.+.
T Consensus 10 ~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~d 89 (416)
T KOG2765|consen 10 WRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEAD 89 (416)
T ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhhh
Confidence 34678999999999999999999999998422 377766555433222222221 11 111000
Q ss_pred --------------------------------------------------CCCCH------------HHHHHHHHHHHHH
Q 016399 78 --------------------------------------------------PAMTL------------NFALQFILLALVG 95 (390)
Q Consensus 78 --------------------------------------------------~~~~~------------~~~~~~~~~g~~~ 95 (390)
+...+ +..+..+....+
T Consensus 90 ~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~l- 168 (416)
T KOG2765|consen 90 AEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPL- 168 (416)
T ss_pred hhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHH-
Confidence 00011 223344555555
Q ss_pred HHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCC
Q 016399 96 ITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAP 175 (390)
Q Consensus 96 ~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~ 175 (390)
-.+.+.++..|+.+++++..+++.++..+||..++.++..||+++ .+++++.+++.|+++++..+....+
T Consensus 169 WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~------sKllav~~si~GViiVt~~~s~~~~---- 238 (416)
T KOG2765|consen 169 WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTL------SKLLAVFVSIAGVIIVTMGDSKQNS---- 238 (416)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhH------HHHHHHHHhhccEEEEEeccccccc----
Confidence 467888999999999999999999999999999999999999999 6999999999999999843221110
Q ss_pred CCCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHH---HHHHHHHHHHHHHHHHH
Q 016399 176 PLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSV---TAYTCFFGLIQFMIIAA 252 (390)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 252 (390)
+.. +....+|+++++++++.||.|.++.|+-..+.+..+.+ ..+.-++..+.++|..+
T Consensus 239 -----------------~~~--a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~ 299 (416)
T KOG2765|consen 239 -----------------DLP--ASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLI 299 (416)
T ss_pred -----------------cCC--ccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHH
Confidence 111 45557999999999999999999999877666322222 22333333444444443
Q ss_pred Hhcc-cccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHH
Q 016399 253 IFER-NLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAV 331 (390)
Q Consensus 253 ~~~~-~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~ 331 (390)
+... ..+.++.++......++..+.++++++-++|.+|.-..++..+++.+.++.+.+++.+.++-+..+++.+++|.+
T Consensus 300 iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi 379 (416)
T KOG2765|consen 300 ILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSI 379 (416)
T ss_pred HHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHH
Confidence 3221 234566667777888888999999999999999999999999999999999999999999889999999999999
Q ss_pred HHHHHhhheeecCcch
Q 016399 332 LIVVGLYLVLWGKSEE 347 (390)
Q Consensus 332 li~~gv~l~~~~~~~~ 347 (390)
.|++|.+.+++..+..
T Consensus 380 ~Ifv~Fv~vn~~~~~~ 395 (416)
T KOG2765|consen 380 PIFVGFVIVNISSENS 395 (416)
T ss_pred HHHHHHhheecccccc
Confidence 9999999998765443
No 20
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.74 E-value=2.9e-15 Score=137.18 Aligned_cols=298 Identities=13% Similarity=0.111 Sum_probs=226.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC---CCchHHHHHHHHHHHHHHHHHHhhhhcc----cC------CCCCHHHHHH
Q 016399 21 QLHLAMVALQFGYAGFHVVSRAALNMG---ISKLVFPVYRNIIAFLLLLPFAYFLEKK----ER------PAMTLNFALQ 87 (390)
Q Consensus 21 ~~~l~~ll~~~~~~~~~~~~k~~~~~~---~~~~~~~~~r~~~~~l~l~~~~~~~~~~----~~------~~~~~~~~~~ 87 (390)
.-++.++...+.++......|+.-..+ +.|...+++-..+-.+++..+.+...++ .. ....+++...
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 567788888899999999999987654 6788888888888888887777665321 11 1224445566
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcC
Q 016399 88 FILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKG 167 (390)
Q Consensus 88 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~ 167 (390)
+.+.+++ +++.|.++|.++.+.+++..++..++-.+.|+++.++++++|++. .||.++.+.+.|+.++.....
T Consensus 95 ~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~------~Qw~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 95 VSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSR------LQWMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhH------HHHHHHHHHHHHHHHHhccCC
Confidence 6777777 899999999999999999999999999999999999999999998 599999999999999962221
Q ss_pred CcccCCCCCCCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCC-chhHHHHHHHHHHHHH
Q 016399 168 PTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQ 246 (390)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~ 246 (390)
+.... ....+ ..+...|....+.+++..+...++.++.+|+.+ +.+..+....+++.+.
T Consensus 168 ~~~~a------~~~~~--------------~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f 227 (345)
T KOG2234|consen 168 SPTGA------KSESS--------------AQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILF 227 (345)
T ss_pred CCCCc------cCCCc--------------ccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence 11100 00111 456679999999999999999999999998765 4455555566666666
Q ss_pred HHHHHHHhcccccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhH
Q 016399 247 FMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGG 326 (390)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~ 326 (390)
.+...+..+.+...| ..-...|-...+.-++.++.+-.+....+|+.+-..-+....+..+++.+.++.+++-.+|...
T Consensus 228 ~~l~~~~~d~~~i~~-~gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F 306 (345)
T KOG2234|consen 228 NLLTILLQDGEAINE-YGFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYF 306 (345)
T ss_pred HHHHHhhcccccccc-CCccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHH
Confidence 665555433322111 1112234444555556677777777888999998888889999999999999999999999999
Q ss_pred HHHHHHHHHHhhheeecCcc
Q 016399 327 IIGAVLIVVGLYLVLWGKSE 346 (390)
Q Consensus 327 ~iG~~li~~gv~l~~~~~~~ 346 (390)
.+|+.+++.++.++...+.+
T Consensus 307 ~lG~~lVi~Si~lY~~~P~~ 326 (345)
T KOG2234|consen 307 LLGALLVILSIFLYSLYPAR 326 (345)
T ss_pred HHHHHHHHHHHHHhhcCCcc
Confidence 99999999999999854443
No 21
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.72 E-value=1.9e-17 Score=152.61 Aligned_cols=290 Identities=15% Similarity=0.127 Sum_probs=223.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHH
Q 016399 20 LQLHLAMVALQFGYAGFHVVSRAALN--MGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGIT 97 (390)
Q Consensus 20 ~~~~l~~ll~~~~~~~~~~~~k~~~~--~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 97 (390)
....++.....++-....+..|..++ ..--|..++.++...+.+.++........+..+..++..+...+..|++ .+
T Consensus 16 ~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~-~~ 94 (316)
T KOG1441|consen 16 LRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLV-FC 94 (316)
T ss_pred HHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHH-HH
Confidence 34455556666666666778899888 3334888888866666666655544433333233355677788889988 68
Q ss_pred HHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCC
Q 016399 98 ANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPL 177 (390)
Q Consensus 98 ~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~ 177 (390)
++..+-+.++.+.+++.+..+..+.|+++.++++++.+|+.+. ..+..++....|+.+... ++
T Consensus 95 ~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~------~~~lsL~piv~GV~ias~--~e--------- 157 (316)
T KOG1441|consen 95 ISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSS------MTYLSLLPIVFGVAIASV--TE--------- 157 (316)
T ss_pred HHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcc------eEEEEEEEeeeeEEEeee--cc---------
Confidence 8999999999999999999999999999999999998888888 588999999999998863 11
Q ss_pred CCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh--hCC-chhHHHHHHHHHHHHHHH-HHHHH
Q 016399 178 NQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLK--KYP-ARLSVTAYTCFFGLIQFM-IIAAI 253 (390)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~--~~~-~~~~~~~~~~~~~~~~~~-~~~~~ 253 (390)
.+.+..|.+.++.+.+..+...++.|+..+ +.. |++....++...+.+.++ |....
T Consensus 158 --------------------~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~ 217 (316)
T KOG1441|consen 158 --------------------LSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDY 217 (316)
T ss_pred --------------------ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhh
Confidence 334468999999999999999999999985 333 788999999999998888 76666
Q ss_pred hccccc---chhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHH
Q 016399 254 FERNLD---AWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGA 330 (390)
Q Consensus 254 ~~~~~~---~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~ 330 (390)
.+++.. .... ........++.. ++........+..+.+++|.+.++.+.+.-++.++.++++|+++.++.+.+|.
T Consensus 218 ~~~~~~~~~~~~~-~~~~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~ 295 (316)
T KOG1441|consen 218 VEGNKFVGFLTAP-WFVTFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGY 295 (316)
T ss_pred hcccceeeeeccc-cchhhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHH
Confidence 555432 1111 111133333334 34566667778899999999999999999999999999999999999999999
Q ss_pred HHHHHHhhheeecCcchhh
Q 016399 331 VLIVVGLYLVLWGKSEEKK 349 (390)
Q Consensus 331 ~li~~gv~l~~~~~~~~~~ 349 (390)
++.++|++++.+.|.++++
T Consensus 296 ~iai~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 296 AIAILGVFLYSRAKLKEKK 314 (316)
T ss_pred HHHHHHHHHHHHHhhhhhc
Confidence 9999999999987766543
No 22
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.70 E-value=1.9e-16 Score=123.07 Aligned_cols=135 Identities=15% Similarity=0.192 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCC-CCCHHHHHHHHHHHHHHHHHH
Q 016399 21 QLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERP-AMTLNFALQFILLALVGITAN 99 (390)
Q Consensus 21 ~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~ 99 (390)
...++++++++++|...++.|...+ ++||...++.|..+..+++..+....++.+.+ ..++|.|.++.+.|+. ..++
T Consensus 3 ~~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla-~gls 80 (140)
T COG2510 3 AAIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLA-GGLS 80 (140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHH-HHHH
Confidence 3588999999999999999999999 69999999999999999998888776654332 3477888888888866 6899
Q ss_pred HHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHh
Q 016399 100 QGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (390)
Q Consensus 100 ~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 163 (390)
+.+||.|++...++.+..+..+.|+++.+++++|++||+|. .+|+|+.+..+|++++.
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~------~~~iG~~LI~~Gailvs 138 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSL------PTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCH------HHHHHHHHHHhCeeeEe
Confidence 99999999999999999999999999999999999999999 69999999999998764
No 23
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.67 E-value=3.4e-15 Score=134.83 Aligned_cols=232 Identities=12% Similarity=0.120 Sum_probs=173.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhh
Q 016399 80 MTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGA 159 (390)
Q Consensus 80 ~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv 159 (390)
.++++...+.+.+++ +++.+.+.++++++++++...++.++..++|++++++++|+|++. .||+++.+.++|+
T Consensus 12 ~~~~~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~------~qW~aL~lL~~Gv 84 (244)
T PF04142_consen 12 KSPKDTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSR------RQWLALFLLVAGV 84 (244)
T ss_pred HhHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccch------hhHHHHHHHHHHH
Confidence 456777888888888 899999999999999999999999999999999999999999988 6999999999999
Q ss_pred hHHhhhcCCcccCCCCCCCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCC-chhHHHHH
Q 016399 160 TVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAY 238 (390)
Q Consensus 160 ~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~ 238 (390)
.++.......... +++.... ++.+ ..+...|.++.++++++.+...++.++.+|+.+ +.+..+..
T Consensus 85 ~lv~~~~~~~~~~--~~~~~~~----------~~~~--~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~q 150 (244)
T PF04142_consen 85 VLVQLSSSQSSDN--SSSSSVH----------HDAS--NQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQ 150 (244)
T ss_pred heeecCCcccccc--ccccccc----------cccc--cchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHH
Confidence 9986322211100 0000000 0001 345578999999999999999999999999875 45556666
Q ss_pred HHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHh
Q 016399 239 TCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFAL 318 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ 318 (390)
..+.+.++.++...+.+.. ..........+-...+..++.+.++-.+....+|+.+...-+.....+.+++.++++++|
T Consensus 151 L~~~gi~~~~~~~~~~~~~-~~~~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf 229 (244)
T PF04142_consen 151 LYLFGILFNLLALLLSDGS-AISESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLF 229 (244)
T ss_pred HHHHHHHHHHHHHhccccc-ccccCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6666666666654443221 111111112222333445556777888888899999999999999999999999999999
Q ss_pred CCCchhhHHHHHHHH
Q 016399 319 GEEFYLGGIIGAVLI 333 (390)
Q Consensus 319 ~e~~~~~~~iG~~li 333 (390)
+.+++....+|..++
T Consensus 230 ~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 230 GFPPSLSFLLGAALV 244 (244)
T ss_pred CCCCchHHhhheecC
Confidence 999999999998753
No 24
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.63 E-value=1.4e-14 Score=112.64 Aligned_cols=136 Identities=19% Similarity=0.211 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHHHHHHHH
Q 016399 204 GCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIA 283 (390)
Q Consensus 204 G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~ 283 (390)
..++++++++++++..++.|-.+++. ||...++.+.....+.+.......+. .......+++.|..+++.|+ +++++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~-~~~~~~~~~k~~lflilSGl-a~gls 80 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGN-WQAGGEIGPKSWLFLILSGL-AGGLS 80 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCc-eecccccCcceehhhhHHHH-HHHHH
Confidence 35789999999999999999999988 48889999998888887777775443 22232346778999999896 69999
Q ss_pred HHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheee
Q 016399 284 FAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLW 342 (390)
Q Consensus 284 ~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~ 342 (390)
+.+|++|++..+++++.++..++|+++++++++++||+++..+++|+++|.+|.+++..
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999999999999999999987753
No 25
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.61 E-value=3.6e-14 Score=121.76 Aligned_cols=224 Identities=11% Similarity=0.071 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhc
Q 016399 87 QFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYK 166 (390)
Q Consensus 87 ~~~~~g~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~ 166 (390)
.+...++- +.+.+...+.|+++.+-....+-.++-|+=+++++.++.|.+-.+ .+..+++++++|+.+.....
T Consensus 87 ~YaAcs~s-YLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w------~kY~cVL~IV~GValFmYK~ 159 (337)
T KOG1580|consen 87 MYAACSAS-YLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHW------RKYCCVLMIVVGVALFMYKE 159 (337)
T ss_pred HHHHHHHH-HHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccH------HHHHHHHHHHHHHHHhhccc
Confidence 33444433 677888888999999988888889999999999999996666666 69999999999999987432
Q ss_pred CCcccCCCCCCCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCC-chhHHHHHHHHHHHH
Q 016399 167 GPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLI 245 (390)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~ 245 (390)
+..... + +.....|.++.++|-..-++....+.+..+.+. ..-.+.++.++.+.+
T Consensus 160 ~Kv~g~----------------------e--~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL 215 (337)
T KOG1580|consen 160 NKVGGA----------------------E--DKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTL 215 (337)
T ss_pred cccCCC----------------------c--ccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHH
Confidence 322211 1 566779999999999999999999888766553 345788888889888
Q ss_pred HHHHHHHHhcccc--cchhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCch
Q 016399 246 QFMIIAAIFERNL--DAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFY 323 (390)
Q Consensus 246 ~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~ 323 (390)
.+..-.++.+... ..+..-.+..|+-+.+.++ ++.+++++.+..+...+|...+++....-.|+++.+.++++.+++
T Consensus 216 ~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls 294 (337)
T KOG1580|consen 216 YLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLS 294 (337)
T ss_pred HhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCc
Confidence 8877666544321 1223334566778888888 599999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhheee
Q 016399 324 LGGIIGAVLIVVGLYLVLW 342 (390)
Q Consensus 324 ~~~~iG~~li~~gv~l~~~ 342 (390)
.+||+|.++++.|...-..
T Consensus 295 ~rQwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 295 GRQWLGTVLVFSALTADVV 313 (337)
T ss_pred HHHHHHHHHHHHHhhhHhh
Confidence 9999999999999876543
No 26
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.58 E-value=2.4e-15 Score=130.44 Aligned_cols=252 Identities=17% Similarity=0.176 Sum_probs=191.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccccccchhHHHHH
Q 016399 49 SKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFL 128 (390)
Q Consensus 49 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~i 128 (390)
.|...+|+.++.-+++..++..++++ .-+..|..+++++++. .-.|.+...|.||++...++.+..-....+.+
T Consensus 47 ~Pt~QtFl~Y~LLalVY~~~~~fR~~-----~~~~~~~hYilla~~D-VEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~ 120 (336)
T KOG2766|consen 47 APTSQTFLNYVLLALVYGPIMLFRRK-----YIKAKWRHYILLAFVD-VEANYFVVKAYQYTSMTSIMLLDCWAIPCVLV 120 (336)
T ss_pred CccHHHHHHHHHHHHHHhhHHHhhhH-----HHHHHHHHhhheeEEe-ecccEEEeeehhhcchHHHHHHHHhhhHHHHH
Confidence 37778899999999999988877542 2234445577788775 44666788999999999999999888889999
Q ss_pred HHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCCCCCCCCCcccccccccCCCCCCchhHHHHHH
Q 016399 129 MAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYL 208 (390)
Q Consensus 129 la~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~ 208 (390)
++|+|+|.|-.+ .++.|+.++++|++.++..+-...+.. . +++...|+.+.
T Consensus 121 lsw~fLktrYrl------mki~gV~iCi~GvvmvV~sDV~agd~a---------------------g--gsnp~~GD~lv 171 (336)
T KOG2766|consen 121 LSWFFLKTRYRL------MKISGVVICIVGVVMVVFSDVHAGDRA---------------------G--GSNPVKGDFLV 171 (336)
T ss_pred HHHHHHHHHHhh------heeeeEEeEecceEEEEEeeecccccc---------------------C--CCCCccCcEEE
Confidence 999998887777 899999999999999885433222111 1 55667899999
Q ss_pred HHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHH-HHHHHHHHHHHH
Q 016399 209 IGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYA-GVVASGIAFAVQ 287 (390)
Q Consensus 209 l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~~~~~~ 287 (390)
++++-+||..++..+.+.|+.+ ..+.....-++|.++..+-.. .+.. +....+.. +....+. ..++.++-|.+.
T Consensus 172 i~GATlYaVSNv~EEflvkn~d-~~elm~~lgLfGaIIsaIQ~i-~~~~-~~~tl~w~--~~i~~yl~f~L~MFllYsl~ 246 (336)
T KOG2766|consen 172 IAGATLYAVSNVSEEFLVKNAD-RVELMGFLGLFGAIISAIQFI-FERH-HVSTLHWD--SAIFLYLRFALTMFLLYSLA 246 (336)
T ss_pred EecceeeeeccccHHHHHhcCc-HHHHHHHHHHHHHHHHHHHHh-hhcc-ceeeEeeh--HHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999888885 788888888899998888744 3332 11111111 2222222 333455556666
Q ss_pred HHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheee
Q 016399 288 IWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLW 342 (390)
Q Consensus 288 ~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~ 342 (390)
..-+|..+++...+-...+-.+++++ ..||=+.+|...+..+.+..|.+++..
T Consensus 247 pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~ 299 (336)
T KOG2766|consen 247 PILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST 299 (336)
T ss_pred HHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence 66788889999999999999999988 567878999999999999999998843
No 27
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.57 E-value=8e-13 Score=117.99 Aligned_cols=253 Identities=17% Similarity=0.205 Sum_probs=187.3
Q ss_pred chHHHHHHHHHHHHHHHHHHhhhhccc---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccccccchhHHH
Q 016399 50 KLVFPVYRNIIAFLLLLPFAYFLEKKE---RPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAIT 126 (390)
Q Consensus 50 ~~~~~~~r~~~~~l~l~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~ 126 (390)
|..++.+++++-.++........+++. +...+|++..+.+..-.+..++...+.+++++|++.+..++..+..++|+
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FI 124 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFI 124 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHH
Confidence 778888888888777665544433322 23567777776554444447888889999999999999999999999999
Q ss_pred HHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCCCCCCCCCcccccccccCCCCCCchhHHHH
Q 016399 127 FLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCV 206 (390)
Q Consensus 127 ~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l 206 (390)
.+++.+|.-||.++ .-..-+.+..+|+++.+ .+. .+....|..
T Consensus 125 llFs~if~lEk~~w------~L~l~v~lI~~Glflft-~Ks------------------------------Tqf~i~Gf~ 167 (349)
T KOG1443|consen 125 LLFSLIFKLEKFRW------ALVLIVLLIAVGLFLFT-YKS------------------------------TQFNIEGFF 167 (349)
T ss_pred HHHHHHHHhHHHHH------HHHHHHHHHhhheeEEE-ecc------------------------------cceeehhHH
Confidence 99999999999998 34455555566666665 333 233457888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhCC----chhHHHHHHHHHHHHHHHHHHHHhccccc-----chhccCCch-HHHHHHHH
Q 016399 207 YLIGHCLSWSGWLVMQAPVLKKYP----ARLSVTAYTCFFGLIQFMIIAAIFERNLD-----AWIFHNGGE-VFSILYAG 276 (390)
Q Consensus 207 ~~l~s~~~~a~~~v~~k~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~l~~~g 276 (390)
+.+++.++.++-..+.+..+++.+ +|....+...-...+.++++.+.+|+... .+...+... +..+...+
T Consensus 168 lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~ 247 (349)
T KOG1443|consen 168 LVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLIS 247 (349)
T ss_pred HHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHH
Confidence 888888888888888888887754 68878888777888888888887776422 222223222 22222222
Q ss_pred HHHHHHHHHH---HHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhhe
Q 016399 277 VVASGIAFAV---QIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLV 340 (390)
Q Consensus 277 i~~~~~~~~~---~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~ 340 (390)
. ++..++.+ -+.-+.+++....++.+...-+-+.+++.++.+|.++...|.|..+...|+.+.
T Consensus 248 l-~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 248 L-GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred H-HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 2 34444433 234567889999999999999999999999999999999999999999999887
No 28
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.57 E-value=1.2e-12 Score=118.51 Aligned_cols=292 Identities=12% Similarity=0.137 Sum_probs=218.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHH--HHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHH
Q 016399 18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPV--YRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVG 95 (390)
Q Consensus 18 ~~~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~--~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 95 (390)
+...++...+.-.+.-....+..|.++.++--|..+.. ++++.+.+.+...-.. +--+.++.+++..+.++...++
T Consensus 9 ~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~-~lv~~~~l~~~~~kk~~P~~~l- 86 (314)
T KOG1444|consen 9 KQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL-GLVNFRPLDLRTAKKWFPVSLL- 86 (314)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh-ceeecCCcChHHHHHHccHHHH-
Confidence 34444556666666666677888998885223444444 7777776665544332 2234567888888888888888
Q ss_pred HHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCC
Q 016399 96 ITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAP 175 (390)
Q Consensus 96 ~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~ 175 (390)
+.+...+-..+++|.+....+++...+|+++++...+++|-+.+. .-+.++...++|....... +
T Consensus 87 f~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~------~v~~Sv~~m~~~s~~~~~~---d------ 151 (314)
T KOG1444|consen 87 FVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSN------KVWASVFAMIIGSVAAAFT---D------ 151 (314)
T ss_pred HHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchh------hHHHHHHHHHHHHHhhccc---c------
Confidence 677777788999999999999999999999999999997755554 6888888888887776521 1
Q ss_pred CCCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCC-chhHHHHHHHHHHHHHHHHHHHHh
Q 016399 176 PLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAIF 254 (390)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 254 (390)
......|..+++...++-+.+.+..|+..+..+ +.+.+.++..+.+.+.+.....+.
T Consensus 152 ----------------------~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ 209 (314)
T KOG1444|consen 152 ----------------------LSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFIT 209 (314)
T ss_pred ----------------------ceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHh
Confidence 223345899999999999999999999776554 567889999999998888888766
Q ss_pred cccc---cchh-ccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHH
Q 016399 255 ERNL---DAWI-FHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGA 330 (390)
Q Consensus 255 ~~~~---~~~~-~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~ 330 (390)
++.. ...+ ......+..+.+.++++.++.|. -.++.+..++...++++..+...+.+...++++++.++...+|.
T Consensus 210 ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~-s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gl 288 (314)
T KOG1444|consen 210 GELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYT-SFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGL 288 (314)
T ss_pred cchHHHHhhcccccchhHHHHHHHHHHHHHHHHHH-HHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHH
Confidence 5421 1111 12334566777777775555554 47889999999999999888888888888888999999999999
Q ss_pred HHHHHHhhheeecCcchhh
Q 016399 331 VLIVVGLYLVLWGKSEEKK 349 (390)
Q Consensus 331 ~li~~gv~l~~~~~~~~~~ 349 (390)
.+-++|-+++.+.+.++++
T Consensus 289 l~~~~ggv~Y~~~~~~~k~ 307 (314)
T KOG1444|consen 289 LVGFFGGVLYSYATFRKKK 307 (314)
T ss_pred HHHhhhhhHHhhhhhhhcc
Confidence 9999999998877755443
No 29
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.44 E-value=2.1e-13 Score=110.57 Aligned_cols=125 Identities=24% Similarity=0.386 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 016399 31 FGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENT 110 (390)
Q Consensus 31 ~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~ 110 (390)
++||...++.|...++ +||....++|+.++.+ ++++....++++....+++++......++++..+++.+++++++++
T Consensus 1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 4689999999999995 9999999999999998 6666555555444667888888889999987789999999999999
Q ss_pred CcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHh
Q 016399 111 SPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (390)
Q Consensus 111 ~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 163 (390)
+++.++++..+.|+++.+++++++||+++. .+++|+++++.|++++.
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~------~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSW------RQIIGIILIIIGVVLIS 125 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCH------HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998 69999999999999874
No 30
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.44 E-value=4.6e-13 Score=108.49 Aligned_cols=125 Identities=24% Similarity=0.430 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHh
Q 016399 213 LSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCID 292 (390)
Q Consensus 213 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~ 292 (390)
++|+.+.++.|+..++.+ +....++++..+.+ .++...+..... ....+...+...++.+++++.+++.+++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 478999999999999875 89999999999998 666666544332 33345566778888888888999999999999
Q ss_pred cCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhhee
Q 016399 293 RGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVL 341 (390)
Q Consensus 293 ~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~ 341 (390)
+.+++.++.+.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998753
No 31
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.40 E-value=6.2e-13 Score=116.77 Aligned_cols=268 Identities=16% Similarity=0.128 Sum_probs=196.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhhhccc----CC--CCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccccccch
Q 016399 49 SKLVFPVYRNIIAFLLLLPFAYFLEKKE----RP--AMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSV 122 (390)
Q Consensus 49 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~----~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~il~~~~ 122 (390)
.|...+.++++++..+.+.+.....+-+ .+ ..+.+.......+.++ ..+...+-+++++|.+.+...+-..+.
T Consensus 60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvV-fi~mI~fnnlcL~yVgVaFYyvgRsLt 138 (347)
T KOG1442|consen 60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVV-FILMISFNNLCLKYVGVAFYYVGRSLT 138 (347)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhe-eeeehhccceehhhcceEEEEeccchh
Confidence 3777888888888877776655433311 11 2344444444444444 344445556999999999999999999
Q ss_pred hHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCCCCCCCCCcccccccccCCCCCCchh
Q 016399 123 PAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWT 202 (390)
Q Consensus 123 pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (390)
.+|+.+++++++|+|-+. .-..++.+.+.|-.+=+..+|.. +....
T Consensus 139 tvFtVlLtyvllkqkTs~------~~~~~C~lIi~GF~lGvdqE~~~----------------------------~~ls~ 184 (347)
T KOG1442|consen 139 TVFTVLLTYVLLKQKTSF------FALGCCLLIILGFGLGVDQEGST----------------------------GTLSW 184 (347)
T ss_pred hhHHHHhHHhhccccccc------ccceeehhheehheecccccccc----------------------------Cccch
Confidence 999999999999999888 46666776666665543111111 33345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCC-chhHHHHHHHHHHHHHHHHHHHHhcccccchh--cc-CCchHHHHHHHHHH
Q 016399 203 LGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAIFERNLDAWI--FH-NGGEVFSILYAGVV 278 (390)
Q Consensus 203 ~G~l~~l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~l~~~gi~ 278 (390)
.|.++++.+.++-|+..+..|+...... ..+..+++....+.+.++|...+.++-...+. .. ....|..+.+.|++
T Consensus 185 ~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglf 264 (347)
T KOG1442|consen 185 IGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLF 264 (347)
T ss_pred hhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHH
Confidence 8999999999999999999998766554 35688999999999999998887543322232 22 33456667777777
Q ss_pred HHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecCcchhhhhh
Q 016399 279 ASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKSEEKKFAS 352 (390)
Q Consensus 279 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~~~~~~~~~ 352 (390)
+..++|.. .+-+|-.+|.+-.+-....-....+++..+++|.-+..-|-|-+++++|...+.+.|+.+.+++.
T Consensus 265 gF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~ 337 (347)
T KOG1442|consen 265 GFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKAS 337 (347)
T ss_pred HHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhc
Confidence 55555543 55678899999999999999999999999999999999999999999999999987766655443
No 32
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.39 E-value=1.2e-11 Score=109.04 Aligned_cols=279 Identities=17% Similarity=0.171 Sum_probs=193.8
Q ss_pred HHHHHHHHHHHh---cCC----CchHHHHHHHHHHHHHHHHHHhhhhcccCC-------------CCCHHHHHHHHHHHH
Q 016399 34 AGFHVVSRAALN---MGI----SKLVFPVYRNIIAFLLLLPFAYFLEKKERP-------------AMTLNFALQFILLAL 93 (390)
Q Consensus 34 ~~~~~~~k~~~~---~~~----~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-------------~~~~~~~~~~~~~g~ 93 (390)
+.+.+++|++-+ .+. .|+..+..-++.-++++..+.+++++...+ +.+.+. ..++.-++
T Consensus 16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p-~lfl~Pal 94 (372)
T KOG3912|consen 16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP-VLFLPPAL 94 (372)
T ss_pred cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCc-ceecChHH
Confidence 345667777644 122 266666666666677777777766553321 011112 22344556
Q ss_pred HHHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCC
Q 016399 94 VGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSP 173 (390)
Q Consensus 94 ~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~ 173 (390)
+- .....+.|.|+.+++++...++.....+|+.+++.-+++.+++. .+|.|+....+|++++...+-..
T Consensus 95 ~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~------~qWl~i~fv~lGlviVg~~d~~~---- 163 (372)
T KOG3912|consen 95 CD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITG------RQWLGILFVSLGLVIVGSLDVHL---- 163 (372)
T ss_pred HH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccch------hhHHHHHHHHhhhheeeeeeccc----
Confidence 64 45666888999999999999999999999999999999999999 59999999999999985322111
Q ss_pred CCCCCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCC-chhHHHHHHHHHHHHHHHHHHH
Q 016399 174 APPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAA 252 (390)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 252 (390)
+++..++ -++...|+++.+.+-+.-|+..++-+|.+++.. +|.....|.-.++.+++..+..
T Consensus 164 ---~~~p~~d--------------~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i 226 (372)
T KOG3912|consen 164 ---VTDPYTD--------------YSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAI 226 (372)
T ss_pred ---ccCCccc--------------cccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHH
Confidence 1111111 355678999999999999999999999888765 7999999999999766665554
Q ss_pred Hhccc--ccchhccCC---chHH---------HHHHHHHHHHHHHHHHHHH----HHhcCCceeeeehhhhHHHHHHHHH
Q 016399 253 IFERN--LDAWIFHNG---GEVF---------SILYAGVVASGIAFAVQIW----CIDRGGPVFVAVYQPVQTLVVAIMA 314 (390)
Q Consensus 253 ~~~~~--~~~~~~~~~---~~~~---------~l~~~gi~~~~~~~~~~~~----a~~~~~~~~~s~~~~~~pv~~~l~~ 314 (390)
..... .+.++-.+. ..|. ..+++...+..++..+++. -.|..++++-.++..+...+-.+++
T Consensus 227 ~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~s 306 (372)
T KOG3912|consen 227 PMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFS 306 (372)
T ss_pred HHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhH
Confidence 42211 001110000 0111 1222233333344444443 3567788888899999999999999
Q ss_pred HHHhCCCchhhHHHHHHHHHHHhhhee
Q 016399 315 SFALGEEFYLGGIIGAVLIVVGLYLVL 341 (390)
Q Consensus 315 ~~~~~e~~~~~~~iG~~li~~gv~l~~ 341 (390)
..+..|.+...|+.|.++.+.|+++++
T Consensus 307 i~m~~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 307 IAMGWEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999887
No 33
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.39 E-value=2.1e-11 Score=109.13 Aligned_cols=265 Identities=15% Similarity=0.190 Sum_probs=204.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccccccchhHHHHH
Q 016399 49 SKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFL 128 (390)
Q Consensus 49 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~i 128 (390)
++....+.+.+.+.++-.....+++ +. ...++.|..+...++.+ .++..+-|.|++|++--...+-..+--+-+++
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~~k--~~-~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml 125 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKWWK--KE-LSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML 125 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhccc--cc-CCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence 4667788888888877755544332 22 33445566677777775 56777999999999988888888888888999
Q ss_pred HHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCCCCCCCCCcccccccccCCCCCCchhHHHHHH
Q 016399 129 MAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYL 208 (390)
Q Consensus 129 la~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~ 208 (390)
++.++.+.|.+. .+.....+.-.|+.+....+..+.. ++.+ ..+...|..+.
T Consensus 126 mg~Lvy~~ky~~------~eYl~~~LIs~GvsiF~l~~~s~s~-------------------~~~g---~~ns~~G~~Ll 177 (327)
T KOG1581|consen 126 MGTLVYGRKYSS------FEYLVAFLISLGVSIFSLFPNSDSS-------------------SKSG---RENSPIGILLL 177 (327)
T ss_pred HHHHHhcCccCc------HHHHHHHHHHhheeeEEEecCCCCc-------------------cccC---CCCchHhHHHH
Confidence 999997777777 6999999999999888754332210 1111 34557899999
Q ss_pred HHHHHHHHHHHHHHHHhhhhCC-chhHHHHHHHHHHHHHHHHHHHHhccccc--chhccCCchHHHHHHHHHHHHHHHHH
Q 016399 209 IGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAIFERNLD--AWIFHNGGEVFSILYAGVVASGIAFA 285 (390)
Q Consensus 209 l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~gi~~~~~~~~ 285 (390)
...-++-+..+..+.++.+++. +++.+.++.++++.+......+..+.... .+....+..+.=++....+ +.+++.
T Consensus 178 ~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~-gavGQ~ 256 (327)
T KOG1581|consen 178 FGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTC-GAVGQL 256 (327)
T ss_pred HHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHh-hhhhhh
Confidence 9999999999999999888765 67889999999999888877554333222 2333445556667777774 899999
Q ss_pred HHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecCcc
Q 016399 286 VQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKSE 346 (390)
Q Consensus 286 ~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~~~ 346 (390)
+.++-+++.++...+.++.+.-+++++++.+.+|.++++.||+|..+++.|+.+-...+++
T Consensus 257 FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 257 FIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred eehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999876655544
No 34
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.33 E-value=1.3e-11 Score=108.68 Aligned_cols=262 Identities=13% Similarity=0.095 Sum_probs=172.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC-CcccccccccchhHHHHHH
Q 016399 51 LVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENT-SPTFASAIQNSVPAITFLM 129 (390)
Q Consensus 51 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~-~~~~~~il~~~~pi~~~il 129 (390)
-.+++.++++..+--+++.--... .+++.+.+++..... . +...+.+-++|+++- +...=.++.+-.++.++++
T Consensus 34 NLITFaqFlFia~eGlif~skf~~-~k~kiplk~Y~i~V~--m--FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~ 108 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIFTSKFFT-VKPKIPLKDYAITVA--M--FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL 108 (330)
T ss_pred eehHHHHHHHHHHhceeeeccccc-cCCCCchhhhheehh--e--eeeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence 345566665555444443311111 225566666543322 2 345666777899885 4444556678899999999
Q ss_pred HHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccC--CCCCCCCCCCCCcccccccccCCCCCCchhHHHHH
Q 016399 130 AAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYS--PAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVY 207 (390)
Q Consensus 130 a~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~ 207 (390)
+++++|. |++..|..++.+..+|+++.++.+.++... .+.+++....+ ...|..|+.+
T Consensus 109 g~il~~k------~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~--------------~~~w~iGi~l 168 (330)
T KOG1583|consen 109 GWILLGK------RYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSD--------------FFWWLIGIAL 168 (330)
T ss_pred HHHhccc------eeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCccccc--------------chHHHHHHHH
Confidence 9999555 445579999999999999998655433221 00001111111 4677899999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhCC-chhHHHHHHHHHHHHHHHHHHHH-hcc-----ccc-----chhccCCchHHHHHHH
Q 016399 208 LIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAI-FER-----NLD-----AWIFHNGGEVFSILYA 275 (390)
Q Consensus 208 ~l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~-----~~~~~~~~~~~~l~~~ 275 (390)
...+-+..|.-.++++...++++ ++-+..+|..+.+...++.+.-= ..+ ..+ .....-|..|+.+
T Consensus 169 L~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yL--- 245 (330)
T KOG1583|consen 169 LVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYL--- 245 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHH---
Confidence 99999999999999999888876 56789999988887766654321 000 000 0111122333333
Q ss_pred HHHHHHHHHHHHHHHH----hcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheee
Q 016399 276 GVVASGIAFAVQIWCI----DRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLW 342 (390)
Q Consensus 276 gi~~~~~~~~~~~~a~----~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~ 342 (390)
+++.+.+.+..++. ...++.+++++..+.-.++.+++.+.|+.++++..|+|..++.+|.+++.-
T Consensus 246 --l~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 246 --LFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred --HHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 23444444444444 455677999999999999999999999999999999999999999988763
No 35
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.31 E-value=1.1e-09 Score=98.90 Aligned_cols=251 Identities=15% Similarity=0.122 Sum_probs=173.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhhhcccCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccccc-cchhHH
Q 016399 49 SKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMT--LNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQ-NSVPAI 125 (390)
Q Consensus 49 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~il~-~~~pi~ 125 (390)
+|..-.+--..-+.++-+....+. + |..+ .+.+...++.|++ ..+.+...+.+.++.+.+.+..+. .++-+.
T Consensus 11 ~~~~Q~lG~t~Gali~alv~~~~~-~---p~~~~~~~~~~~~~lsG~~-W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg 85 (269)
T PF06800_consen 11 KPANQILGTTIGALIFALVVFLFR-Q---PAFSMSGTSFIVAFLSGAF-WAIGQIGQFKSFKKIGVSKTMPISTGLQLVG 85 (269)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHh-C---CCcchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcceeeeccchhHHHHH
Confidence 344444444444444444444332 2 3343 4777888888888 689999999999999999999997 778888
Q ss_pred HHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCCCCCCCCCcccccccccCCCCCCchhHHH
Q 016399 126 TFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGC 205 (390)
Q Consensus 126 ~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 205 (390)
+.+++.++++|--+.+.+ ....+++++.++|+++....+..+.. .+ + ..+...|.
T Consensus 86 ~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~lts~~~~~~~~---------~~------------~--~~~~~kgi 140 (269)
T PF06800_consen 86 TSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVILTSYQDKKSDK---------SS------------S--KSNMKKGI 140 (269)
T ss_pred HHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHHHhccccccccc---------cc------------c--ccchhhHH
Confidence 999999999996655311 12344677788888877632221110 00 0 34557899
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHHHHHHHHHH
Q 016399 206 VYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFA 285 (390)
Q Consensus 206 l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~ 285 (390)
+..+++.+.|..|.+..|.. +. |++...+.+.....+....+..+.+. ..+ ....| .-+..|++ -.++..
T Consensus 141 ~~Ll~stigy~~Y~~~~~~~--~~-~~~~~~lPqaiGm~i~a~i~~~~~~~--~~~---~k~~~-~nil~G~~-w~ignl 210 (269)
T PF06800_consen 141 LALLISTIGYWIYSVIPKAF--HV-SGWSAFLPQAIGMLIGAFIFNLFSKK--PFF---EKKSW-KNILTGLI-WGIGNL 210 (269)
T ss_pred HHHHHHHHHHHHHHHHHHhc--CC-ChhHhHHHHHHHHHHHHHHHhhcccc--ccc---ccchH-HhhHHHHH-HHHHHH
Confidence 99999999999999986652 33 47777776665555544444443311 111 22223 33455664 788899
Q ss_pred HHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhh----HHHHHHHHHHHhhh
Q 016399 286 VQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLG----GIIGAVLIVVGLYL 339 (390)
Q Consensus 286 ~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~----~~iG~~li~~gv~l 339 (390)
++..+.++.+....=.+..+.++++.+.+.+++||+-+.. .++|.+++++|.++
T Consensus 211 ~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 211 FYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999999999997755 45688888888754
No 36
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.24 E-value=8.3e-11 Score=100.48 Aligned_cols=275 Identities=12% Similarity=0.160 Sum_probs=185.3
Q ss_pred HHHHHHHhc-CCC-chHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccc
Q 016399 38 VVSRAALNM-GIS-KLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFA 115 (390)
Q Consensus 38 ~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~ 115 (390)
+-.|+.++. +++ -+.+.+.+.+++..-++.+-..+..+. +..+ .+.++..+++- ..-...--.+++|++....
T Consensus 23 ltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~f-R~t~---aK~WfpiSfLL-v~MIyt~SKsLqyL~vpiY 97 (309)
T COG5070 23 LTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEF-RLTK---AKKWFPISFLL-VVMIYTSSKSLQYLAVPIY 97 (309)
T ss_pred HhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhe-ehhh---hhhhcCHHHHH-HHHHHhcccceeeeeeeHH
Confidence 344555542 222 234556666555555544433222111 1222 23333344442 2223344579999999999
Q ss_pred cccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCCCCCCCCCcccccccccCC
Q 016399 116 SAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGD 195 (390)
Q Consensus 116 ~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (390)
+++.+++.+.++....++++.|++- .+..+.++.++.-+.-...+..... ..
T Consensus 98 TiFKNltII~iAygEvl~Fgg~vts------l~l~SFilMvlSS~va~w~D~q~~~----------------------~~ 149 (309)
T COG5070 98 TIFKNLTIILIAYGEVLFFGGRVTS------LELLSFILMVLSSVVATWGDQQASA----------------------FK 149 (309)
T ss_pred HHhccceeehhHhhHHHHhcCccch------hhHHHHHHHHHHHHHhccchhhHHH----------------------HH
Confidence 9999999999999999999988887 6777777766665555421111000 00
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCC-chhHHHHHHHHHHHHHHHHHHHHhcccccc--hhccCCchHHHH
Q 016399 196 AKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFGLIQFMIIAAIFERNLDA--WIFHNGGEVFSI 272 (390)
Q Consensus 196 ~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 272 (390)
....+.|.+++...++..+.+....|+..+-.+ ......+|....+..++....++.++.... -...+.....++
T Consensus 150 --~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am 227 (309)
T COG5070 150 --AQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAM 227 (309)
T ss_pred --hcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHH
Confidence 223456888899999999999999988766443 357789999999999998888877643221 111122345567
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecCcchh
Q 016399 273 LYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKSEEK 348 (390)
Q Consensus 273 ~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~~~~~ 348 (390)
...|+++-+++ ++-.|.++..+.+..++++.++-.-..+-|.++++|+.+...+..+.+-..+-.++...+.+++
T Consensus 228 ~ISgl~svgiS-y~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~ 302 (309)
T COG5070 228 FISGLCSVGIS-YCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ 302 (309)
T ss_pred HHHHHHHhhhh-hccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777644444 4568899999999999999999999999999999999999999998888877777776554433
No 37
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.21 E-value=5.7e-10 Score=98.16 Aligned_cols=228 Identities=14% Similarity=0.187 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhh
Q 016399 85 ALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL 164 (390)
Q Consensus 85 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 164 (390)
|+.+..++.+ ....+.+..-++.|++--.-.++..+--+=+++.+.++ ..+|++..+.++..+..+|+++.++
T Consensus 106 ~rtY~~la~~-t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifI------qGkRY~v~d~~aA~lm~lGli~FTL 178 (367)
T KOG1582|consen 106 WRTYVILAFL-TVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFI------QGKRYGVHDYIAAMLMSLGLIWFTL 178 (367)
T ss_pred hhHhhhhHhh-hhhccccCcCccccccCcHHHHHHhhhhhhhhheeeee------ccccccHHHHHHHHHHHHHHHhhhh
Confidence 4445555555 45677677788888876666666677666677888888 6677777999999999999999986
Q ss_pred hcCCcccCCCCCCCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCC-chhHHHHHHHHHH
Q 016399 165 YKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP-ARLSVTAYTCFFG 243 (390)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~ 243 (390)
.+.... ++....|+.+.-.+-++-|.-.-++++..+..+ +..++.+++..++
T Consensus 179 ADs~~s---------------------------PNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG 231 (367)
T KOG1582|consen 179 ADSQTS---------------------------PNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIG 231 (367)
T ss_pred cccccC---------------------------CCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeeccc
Confidence 443322 445568999888888898888888999888776 4567889999999
Q ss_pred HHHHHHHHHHhcccccchhccC--C-chHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCC
Q 016399 244 LIQFMIIAAIFERNLDAWIFHN--G-GEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGE 320 (390)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e 320 (390)
.+.++......+.-...|+.-. + ......++.+. .+.++......-++..++..++.+....-.+++++++++|..
T Consensus 232 ~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsK 310 (367)
T KOG1582|consen 232 FVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSK 310 (367)
T ss_pred HHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcC
Confidence 9988888777665555554322 2 22333444444 466777777777888999999999999999999999999999
Q ss_pred CchhhHHHHHHHHHHHhhheeecCcch
Q 016399 321 EFYLGGIIGAVLIVVGLYLVLWGKSEE 347 (390)
Q Consensus 321 ~~~~~~~iG~~li~~gv~l~~~~~~~~ 347 (390)
++|....-|..+|+.|+++-.+.++.+
T Consensus 311 PfT~qy~~~gllv~lgI~Ln~ysk~nk 337 (367)
T KOG1582|consen 311 PFTEQYVWSGLLVVLGIYLNMYSKRNK 337 (367)
T ss_pred chHHHHhhhhHHHHHHHHhhcccCCCC
Confidence 999999999999999999988877443
No 38
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.21 E-value=7.9e-11 Score=98.75 Aligned_cols=212 Identities=15% Similarity=0.118 Sum_probs=158.8
Q ss_pred HHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCC
Q 016399 96 ITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAP 175 (390)
Q Consensus 96 ~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~ 175 (390)
..+.+..|..|++..+++.++.+..+.-.|+.+++++.+++|+.- .++++.++++.|++++...++.
T Consensus 63 Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~------~kIlaailAI~GiVmiay~DN~------- 129 (290)
T KOG4314|consen 63 WTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMG------FKILAAILAIGGIVMIAYADNE------- 129 (290)
T ss_pred EecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhh------hhHHHHHHHhCcEEEEEeccch-------
Confidence 356778999999999999999999999999999999999999998 7999999999999998632221
Q ss_pred CCCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHH----HHHHHHH
Q 016399 176 PLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGL----IQFMIIA 251 (390)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 251 (390)
......|+.+++.+++..|+|-++-|+.....+ --....++...+. ....+..
T Consensus 130 ----------------------~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn-~Gdaa~FmS~LGF~NL~~~~~~~l 186 (290)
T KOG4314|consen 130 ----------------------HADEIIGIACAVGSAFMAALYKVLFKMFIGNAN-FGDAAHFMSCLGFFNLCFISFPAL 186 (290)
T ss_pred ----------------------hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCc-chhHHHHHHHHHHHHHHHHhhhHH
Confidence 334468999999999999999999998876643 1122222222222 2222222
Q ss_pred HHhcccccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHH
Q 016399 252 AIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAV 331 (390)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~ 331 (390)
+..-...+.|.......|..+...+.+ +..-.++.+.++..+.|...++-+....+.....+.++-+-..+.....|.+
T Consensus 187 IL~~T~VE~~qsFA~~PWG~l~G~A~L-~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~ 265 (290)
T KOG4314|consen 187 ILAFTGVEHLQSFAAAPWGCLCGAAGL-SLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATC 265 (290)
T ss_pred HHHHhchHHHHHHhhCCchhhhhHHHH-HHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 222223334443344557777777765 4445566788999999999999999999999999976555567888999999
Q ss_pred HHHHHhhheeecC
Q 016399 332 LIVVGLYLVLWGK 344 (390)
Q Consensus 332 li~~gv~l~~~~~ 344 (390)
+|++|.++.....
T Consensus 266 iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 266 IICIGFILIIIPE 278 (290)
T ss_pred HHHHhHHheeccc
Confidence 9999998887544
No 39
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.20 E-value=2.6e-10 Score=104.75 Aligned_cols=133 Identities=21% Similarity=0.267 Sum_probs=113.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCch--HHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHH
Q 016399 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKL--VFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGI 96 (390)
Q Consensus 19 ~~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~--~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 96 (390)
...|.+++++++++|+...+..|...+ +.++. ....+++.++.+++.++.+..++. ...+.+++...+..++++.
T Consensus 126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 202 (260)
T TIGR00950 126 NPAGLLLGLGSGISFALGTVLYKRLVK-KEGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIGT 202 (260)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhHHhh-cCCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHHH
Confidence 467999999999999999999999887 36644 455577889988888887654432 2346677777888999888
Q ss_pred HHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhh
Q 016399 97 TANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGAT 160 (390)
Q Consensus 97 ~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~ 160 (390)
.+.+.++++++++.+++.++.+.++.|+++.++++++++|+++. .+++|+.+.+.|+.
T Consensus 203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~------~~~~G~~li~~g~~ 260 (260)
T TIGR00950 203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSL------PQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHhcC
Confidence 89999999999999999999999999999999999999999999 69999999998863
No 40
>PRK13499 rhamnose-proton symporter; Provisional
Probab=99.15 E-value=2e-08 Score=94.25 Aligned_cols=296 Identities=13% Similarity=0.025 Sum_probs=181.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHh-----hhhc---ccCCCCCHHHHHHHHH
Q 016399 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAY-----FLEK---KERPAMTLNFALQFIL 90 (390)
Q Consensus 19 ~~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~-----~~~~---~~~~~~~~~~~~~~~~ 90 (390)
...|+++.+++.++||++++..|.. . ..+-..+ +. +..++...+.. +..+ ......+.+.+...++
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~~-k-~w~wE~~---W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l 78 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKKV-K-KWSWETM---WS-VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFL 78 (345)
T ss_pred hHHHHHHHHHHHHHhhccccccccc-C-CCchhHH---HH-HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence 5679999999999999999999993 3 2332221 11 11111111111 1000 1112356677777888
Q ss_pred HHHHHHHHHHHHHHHhcccCCcccccccc-cchhHHHHHHHHHHhhccc---cccccCccccchhHHHHHhhhhHHhhhc
Q 016399 91 LALVGITANQGFYLLGLENTSPTFASAIQ-NSVPAITFLMAAIFRIEKV---RLDRKDGIAKVVGTLFCVAGATVITLYK 166 (390)
Q Consensus 91 ~g~~~~~~~~~~~~~al~~~~~~~~~il~-~~~pi~~~ila~l~l~e~~---~~~~~~~~~~~~g~~l~~~Gv~li~~~~ 166 (390)
.|++ -...+..++.++++.+.+.+..+. .++-+++.++..++++|=- +. +-...-.+|+++.++|+++...-.
T Consensus 79 ~G~~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t--~~g~~~~~gv~liliGi~l~s~Ag 155 (345)
T PRK13499 79 FGAL-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLAT--NGGRMTLLGVLVALIGVAIVGRAG 155 (345)
T ss_pred HHHH-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHcccccccccc--chHHHHHHHHHHHHHHHHHHHHhh
Confidence 8888 688999999999999999998884 8899999999999998632 22 223346788889999999886311
Q ss_pred CCcccCCCCCCCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHH-------HHHHHhhhhCCchhHHHHHH
Q 016399 167 GPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWL-------VMQAPVLKKYPARLSVTAYT 239 (390)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~-------v~~k~~~~~~~~~~~~~~~~ 239 (390)
...+.+.. .++.+ ..+...|++.++++.+.++.|. ...+...+...++......+
T Consensus 156 ~~k~~~~~----------------~~~~~--~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~ 217 (345)
T PRK13499 156 QLKERKMG----------------IKKAE--EFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPS 217 (345)
T ss_pred hhcccccc----------------ccccc--ccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHH
Confidence 10100000 00001 4566799999999999999999 43333211111344444444
Q ss_pred HH---HHHHHHHH-HHHHh--c-cccc-chhccC-C----chHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeee---hh
Q 016399 240 CF---FGLIQFMI-IAAIF--E-RNLD-AWIFHN-G----GEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAV---YQ 303 (390)
Q Consensus 240 ~~---~~~~~~~~-~~~~~--~-~~~~-~~~~~~-~----~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~---~~ 303 (390)
.. .+.++.-+ ...+. . ++.. ...... . ......++.|+. =.+++++|..+-++.+...... +.
T Consensus 218 ~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~-W~~~~~~y~~~~~~~g~~~~~~sw~l~ 296 (345)
T PRK13499 218 YVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVM-WYLQFFFYAMGHSKLGAQYDFVSWMLH 296 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCccchHHHHHh
Confidence 44 33333222 12211 1 1110 011111 1 112222444443 6778888888888886654444 44
Q ss_pred -hhHHHHHHHHHHHHhCCCch------hhHHHHHHHHHHHhhheeec
Q 016399 304 -PVQTLVVAIMASFALGEEFY------LGGIIGAVLIVVGLYLVLWG 343 (390)
Q Consensus 304 -~~~pv~~~l~~~~~~~e~~~------~~~~iG~~li~~gv~l~~~~ 343 (390)
.+..+++.+.+. +++|.-+ ...++|.+++++|..+....
T Consensus 297 m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 297 MSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred ccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 788899999998 5999866 56789999999998876543
No 41
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.14 E-value=1.1e-09 Score=92.10 Aligned_cols=138 Identities=21% Similarity=0.290 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhC-----C-chhHHHHHHHHHHHHHHHHHHHHhcccccchhc---c------CCch
Q 016399 204 GCVYLIGHCLSWSGWLVMQAPVLKKY-----P-ARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIF---H------NGGE 268 (390)
Q Consensus 204 G~l~~l~s~~~~a~~~v~~k~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~ 268 (390)
|.++++.+.++.+++.++.|+..++. . ++.....+....+.+.+++...+.+........ . .+..
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 67899999999999999999988872 2 789999999999999999998887654311110 0 2234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheee
Q 016399 269 VFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLW 342 (390)
Q Consensus 269 ~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~ 342 (390)
+..++..|++ ........+..+++.+|...++++.+..+..++++++++||+++..+++|.++.++|++++.|
T Consensus 81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 5555555654 667778888999999999999999999999999999999999999999999999999998764
No 42
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.14 E-value=1e-09 Score=102.81 Aligned_cols=140 Identities=14% Similarity=0.209 Sum_probs=111.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccch-hccCCchHHHHHHHHH
Q 016399 199 KNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAW-IFHNGGEVFSILYAGV 277 (390)
Q Consensus 199 ~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi 277 (390)
.+...|.+++++++++|+...+..|.. .+.+ |....++++.++.+.+.+......+..... ...++..+ .....+.
T Consensus 4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 80 (296)
T PRK15430 4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKI-FMLAVSA 80 (296)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHH-HHHHHHH
Confidence 445689999999999999999999764 5564 899999999999887776655432111100 01122223 2333566
Q ss_pred HHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhhee
Q 016399 278 VASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVL 341 (390)
Q Consensus 278 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~ 341 (390)
++.+..+.++++++++.+++.++++.++.|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 6688899999999999999999999999999999999999999999999999999999998765
No 43
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.13 E-value=8.9e-11 Score=93.57 Aligned_cols=103 Identities=20% Similarity=0.301 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHhhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHH
Q 016399 55 VYRNIIAFLLLLPFAYFLEKKE--RPAMTLNFALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAI 132 (390)
Q Consensus 55 ~~r~~~~~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l 132 (390)
.+|+.++.+++..+...+++.+ .+..+++.+.+.+..|+++...++.++++|+++.+ +.++++.++.|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 5789999999888877754321 12334455667778888877789999999999999 58889999999999999999
Q ss_pred HhhccccccccCccccchhHHHHHhhhhHHhh
Q 016399 133 FRIEKVRLDRKDGIAKVVGTLFCVAGATVITL 164 (390)
Q Consensus 133 ~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 164 (390)
++|||++. .++.+++++++|++++..
T Consensus 81 ~~~er~~~------~~~~a~~l~~~Gv~li~~ 106 (113)
T PF13536_consen 81 FFKERLSP------RRWLAILLILIGVILIAW 106 (113)
T ss_pred HhcCCCCH------HHHHHHHHHHHHHHHHhh
Confidence 99999999 599999999999999974
No 44
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.08 E-value=2.3e-09 Score=98.31 Aligned_cols=136 Identities=13% Similarity=0.233 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccc---cchhccCCch-HHHHHHHHHH
Q 016399 203 LGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNL---DAWIFHNGGE-VFSILYAGVV 278 (390)
Q Consensus 203 ~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~l~~~gi~ 278 (390)
.|.++.++++++|+...+..|. ..+. +|.+..+++++++.+++.+......+.. ..+....... +..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 4788999999999999999997 4556 5899999999999888776654433211 1111112222 3345555554
Q ss_pred HHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhhee
Q 016399 279 ASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVL 341 (390)
Q Consensus 279 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~ 341 (390)
.++.+.++++++++.++..++.+.++.|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999988764
No 45
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.02 E-value=6.5e-09 Score=96.70 Aligned_cols=133 Identities=18% Similarity=0.215 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHHHHHHHHH
Q 016399 205 CVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAF 284 (390)
Q Consensus 205 ~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~ 284 (390)
.++.+++++++|...+..|+..++.+ + ...+....+.++..+....... ...+...+ ..++..+..+.+.....+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~--~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEP-D--FLWWALLAHSVLLTPYGLWYLA-QVGWSRLP-ATFWLLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchh-H--HHHHHHHHHHHHHHHHHHHhcc-cCCCCCcc-hhhHHHHHHHHHHHHHHH
Confidence 46789999999999999998776643 3 3455555566666665553211 12233222 334444445555688999
Q ss_pred HHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheee
Q 016399 285 AVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLW 342 (390)
Q Consensus 285 ~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~ 342 (390)
.++++++++.+++.++++.+++|+++.++++++++|+++..+++|.++++.|+++...
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999987764
No 46
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.02 E-value=6.3e-09 Score=97.37 Aligned_cols=136 Identities=13% Similarity=0.096 Sum_probs=112.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHH
Q 016399 20 LQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITAN 99 (390)
Q Consensus 20 ~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 99 (390)
..|.++.+++++.|+...+..|...+ +.++.... +-..++.+++.++...... ....+...+...+..|+++..+.
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~~~-~~~~~~~~-~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~ 222 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRAGA-EHGPATVA-IGSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP 222 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHH-HHHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence 56999999999999999999999876 47777764 4445666666666654322 12245556666678999989999
Q ss_pred HHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhh
Q 016399 100 QGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLY 165 (390)
Q Consensus 100 ~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~ 165 (390)
+.+|++++++.+++.++++..++|+++.++++++++|+++. .+++|..+.+.|++.....
T Consensus 223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~------~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTL------IQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999 7999999999999998743
No 47
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=99.01 E-value=1.2e-08 Score=94.95 Aligned_cols=279 Identities=14% Similarity=0.095 Sum_probs=156.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHH-HHHHHHHHHHHHH
Q 016399 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNF-ALQFILLALVGIT 97 (390)
Q Consensus 19 ~~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~ 97 (390)
...|++.++.++++.+....+.|..... .+... .| .+. ..+.. ....++.|++.+.
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~~~---~~----------------~~~---~~~~~l~~~~W~~G~~~~~ 61 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPRGS---LR----------------AGS---GGRSYLRRPLWWIGLLLMV 61 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhccc---cc----------------ccc---hhhHHHhhHHHHHHHHHHh
Confidence 4679999999999999999999987653 11100 00 000 01111 1223455555567
Q ss_pred HHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCC
Q 016399 98 ANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPL 177 (390)
Q Consensus 98 ~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~ 177 (390)
++..+.+.|+.+.|.+..+.+..+.-++..+++..++|||++. .++.|+.++++|..++... ++...+..+
T Consensus 62 ~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~------~~~~G~~l~i~G~~liv~~-~~~~~~~~t-- 132 (300)
T PF05653_consen 62 LGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTR------RDIVGCALIILGSVLIVIF-APKEEPIHT-- 132 (300)
T ss_pred cchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchH------hHHhhHHHHHhhheeeEEe-CCCCCCcCC--
Confidence 7788889999999999999999999999999999999999999 6999999999999887643 322211100
Q ss_pred CCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHH---HHHHh
Q 016399 178 NQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMI---IAAIF 254 (390)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 254 (390)
. ++..+... +..+ +....... .++..+.....+|..++ +...........+....+. +....
T Consensus 133 -----~-----~~l~~~~~-~~~f-l~y~~~~~-~~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i 197 (300)
T PF05653_consen 133 -----L-----DELIALLS-QPGF-LVYFILVL-VLILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILI 197 (300)
T ss_pred -----H-----HHHHHHhc-Ccce-ehhHHHHH-HHHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHH
Confidence 0 00000000 0111 11111111 12222222222221111 1111111111111111110 11100
Q ss_pred cccc-cchhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhh-hHHHHHHHHHHHHhCCC--chh----hH
Q 016399 255 ERNL-DAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQP-VQTLVVAIMASFALGEE--FYL----GG 326 (390)
Q Consensus 255 ~~~~-~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~-~~pv~~~l~~~~~~~e~--~~~----~~ 326 (390)
.... ..-....+..|..++.. +++........++|+++.+++.+.++.+ .-...+++-+.++++|. .+. ..
T Consensus 198 ~~~~~g~~~f~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~ 276 (300)
T PF05653_consen 198 KLTFSGDNQFTYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGF 276 (300)
T ss_pred HHHhcCchhhhhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHH
Confidence 0000 01111233334443333 3446677788899999999987776655 45666777788888875 344 35
Q ss_pred HHHHHHHHHHhhheeecCc
Q 016399 327 IIGAVLIVVGLYLVLWGKS 345 (390)
Q Consensus 327 ~iG~~li~~gv~l~~~~~~ 345 (390)
..|..+++.|++++...++
T Consensus 277 ~~G~~~ii~GV~lL~~~~~ 295 (300)
T PF05653_consen 277 LCGFLIIIIGVFLLSSSKD 295 (300)
T ss_pred HHHHHHHHHhhheeeccCc
Confidence 6788899999998875543
No 48
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.01 E-value=4.8e-09 Score=98.09 Aligned_cols=138 Identities=17% Similarity=0.083 Sum_probs=115.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHH
Q 016399 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA 98 (390)
Q Consensus 19 ~~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 98 (390)
...|.++.++++++|+...+..|.... .++....++++.++.+.+.++............+...|...+..++++..+
T Consensus 148 ~~~G~l~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~ 225 (292)
T PRK11272 148 NPWGAILILIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSII 225 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 356999999999999999999998644 245566778888888887777654322211224567788888899998899
Q ss_pred HHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhh
Q 016399 99 NQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL 164 (390)
Q Consensus 99 ~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 164 (390)
.+.+|++++++.+++.++++..+.|+++.++++++++|+++. .+++|..+.+.|+++...
T Consensus 226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~------~~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSP------IEWLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcH------HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 699999999999999863
No 49
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.98 E-value=1.1e-08 Score=97.88 Aligned_cols=137 Identities=9% Similarity=0.132 Sum_probs=104.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-hHHHHHHHHHHHHHHHHHHhhhhcccC----CCCCHHHHHHHHHHHHH
Q 016399 20 LQLHLAMVALQFGYAGFHVVSRAALNMGISK-LVFPVYRNIIAFLLLLPFAYFLEKKER----PAMTLNFALQFILLALV 94 (390)
Q Consensus 20 ~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~-~~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~ 94 (390)
..|.++++++++.|+...++.|..... +++ ...+++...++.+.+.++.....+... ...+... ...+..+++
T Consensus 188 ~lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~i~y~~i~ 265 (358)
T PLN00411 188 LIGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITL-ITIVTMAII 265 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHH-HHHHHHHHH
Confidence 458899999999999999999988774 655 455666666666666555444322111 1122222 223444554
Q ss_pred HHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhh
Q 016399 95 GITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLY 165 (390)
Q Consensus 95 ~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~ 165 (390)
..+.+.++++++++.+++.+++..++.|+++.++++++++|++++ .+++|.++.+.|+++....
T Consensus 266 -t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~------~~~iG~~LIl~Gv~l~~~~ 329 (358)
T PLN00411 266 -TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYL------GCLIGGILITLGFYAVMWG 329 (358)
T ss_pred -HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHHHHHHHhh
Confidence 567888999999999999999999999999999999999999999 6999999999999998743
No 50
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.92 E-value=6.9e-10 Score=96.47 Aligned_cols=278 Identities=17% Similarity=0.144 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 016399 22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG 101 (390)
Q Consensus 22 ~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 101 (390)
.++.+++-++.||..+.+.... +-.|.+.+.-...-+.++.+.+++. . .|..+.+.+..-++.|++ -.+.+.
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~-~---~p~~T~~~~iv~~isG~~-Ws~GQ~ 74 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF-V---SPELTLTIFIVGFISGAF-WSFGQA 74 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee-e---cCccchhhHHHHHHhhhH-hhhhhh
Confidence 5788999999999999877553 4466666555544444444444443 2 244677777778888888 578999
Q ss_pred HHHHhcccCCcccccccc-cchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCCCCC
Q 016399 102 FYLLGLENTSPTFASAIQ-NSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPLNQI 180 (390)
Q Consensus 102 ~~~~al~~~~~~~~~il~-~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~ 180 (390)
..+.|.++.+.+.+..+. .++-+-+.+++++.+|| | ....-+++.++.+++++. |-......+..+..
T Consensus 75 ~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~E---W------~t~~~~IlG~iAlilivi--G~~lTs~~~~~nk~ 143 (288)
T COG4975 75 NQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHE---W------TTPTQIILGFIALILIVI--GIYLTSKQDRNNKE 143 (288)
T ss_pred hhhhheeeeeeeccccccchhhHhhceeeeEEEEec---c------CcchhHHHHHHHHHHHHH--hheEeeeecccccc
Confidence 999999999999999996 77888899999999999 4 233334444444444331 11110000011111
Q ss_pred CCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccc
Q 016399 181 QPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDA 260 (390)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (390)
.++ .++...|....+.|.+.|..|.++.+-.. . |.+.....+.....+..+.+... ..+ ..
T Consensus 144 ~~~--------------~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v-~g~saiLPqAiGMv~~ali~~~~-~~~-~~ 204 (288)
T COG4975 144 EEN--------------PSNLKKGIVILLISTLGYVGYVVLFQLFD--V-DGLSAILPQAIGMVIGALILGFF-KME-KR 204 (288)
T ss_pred ccC--------------hHhhhhheeeeeeeccceeeeEeeecccc--c-cchhhhhHHHHHHHHHHHHHhhc-ccc-cc
Confidence 111 45667899999999999999999855532 2 34545554444333333333332 111 11
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhH----HHHHHHHHHH
Q 016399 261 WIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGG----IIGAVLIVVG 336 (390)
Q Consensus 261 ~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~----~iG~~li~~g 336 (390)
..+..+.-+..|+. -+++...+..+-++.+..+.=.+..+..+++.+-+.++++|+-|..+ ++|.+++++|
T Consensus 205 ----~~K~t~~nii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvg 279 (288)
T COG4975 205 ----FNKYTWLNIIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVG 279 (288)
T ss_pred ----hHHHHHHHHhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHH
Confidence 22333444556665 77888888999999999888888999999999999999999988765 5688888888
Q ss_pred hhheee
Q 016399 337 LYLVLW 342 (390)
Q Consensus 337 v~l~~~ 342 (390)
..+.-.
T Consensus 280 ai~lg~ 285 (288)
T COG4975 280 AILLGI 285 (288)
T ss_pred hhhhhe
Confidence 776543
No 51
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.89 E-value=4.5e-08 Score=79.25 Aligned_cols=122 Identities=15% Similarity=0.134 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHHHHHHH
Q 016399 203 LGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGI 282 (390)
Q Consensus 203 ~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~ 282 (390)
.|.++.+++.++.+...++-|+..++.++ ...... . . ...... .+ ....++.|+++.++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~-~~~~~~-----------~~---p~~~i~lgl~~~~l 60 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----I-AALLAF-----------GL---ALRAVLLGLAGYAL 60 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----H-HHHHHH-----------hc---cHHHHHHHHHHHHH
Confidence 36788999999999999999998887652 221111 0 0 000000 01 12356678889999
Q ss_pred HHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHH--HhCCCchhhHHHHHHHHHHHhhheeecCc
Q 016399 283 AFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASF--ALGEEFYLGGIIGAVLIVVGLYLVLWGKS 345 (390)
Q Consensus 283 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~--~~~e~~~~~~~iG~~li~~gv~l~~~~~~ 345 (390)
++.+|.+++++.+.+.+..+....+++..+.++. ++||++++.+++|+++|++|+++..+.++
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999999999999998888888874 89999999999999999999999875444
No 52
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.85 E-value=3.4e-08 Score=88.54 Aligned_cols=202 Identities=12% Similarity=-0.001 Sum_probs=121.1
Q ss_pred cccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCc-----------ccCCCCCCCCCCCCC
Q 016399 116 SAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPT-----------IYSPAPPLNQIQPDS 184 (390)
Q Consensus 116 ~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~-----------~~~~~~~~~~~~~~~ 184 (390)
....+..++++++..+.+.+++.+. .++++.++...|+......+.+. ..+...+.
T Consensus 8 ~~~~s~~l~~v~l~~~~~~~~~~~~------~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~------- 74 (222)
T TIGR00803 8 IIFKQNNLVLIALGNLLAAGKQVTQ------LKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSS------- 74 (222)
T ss_pred HHHHhcchHHHHHhcccccceeeeh------HHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCC-------
Confidence 3445667777777777776666664 57777777777766432211000 00000000
Q ss_pred cccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHH-HHHHHHHHHHHHHHHHHHhcccc-cchh
Q 016399 185 LTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSV-TAYTCFFGLIQFMIIAAIFERNL-DAWI 262 (390)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 262 (390)
+ +... ..+...|....+.+.++-+...++.++..|+.+..... +....+++.+.........+.+. ..+.
T Consensus 75 -----~-~~~~--~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 146 (222)
T TIGR00803 75 -----A-KTLM--FGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFG 146 (222)
T ss_pred -----c-cccc--cccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccC
Confidence 0 0000 23445788888888888889999998876665322222 22222222222222111111110 0111
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhhe
Q 016399 263 FHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLV 340 (390)
Q Consensus 263 ~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~ 340 (390)
. ...+....+.-++.+.++..+..+.+++.++...+....++++++.+++.+++||+++..+++|+.+++.|++++
T Consensus 147 ~--~~~~~~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 147 F--FIGYPTAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred c--ccCCchHHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 0 011111222223457778888999999999999999999999999999999999999999999999999998653
No 53
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.83 E-value=4.1e-08 Score=91.96 Aligned_cols=133 Identities=15% Similarity=0.152 Sum_probs=104.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHH
Q 016399 20 LQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITAN 99 (390)
Q Consensus 20 ~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 99 (390)
..|.+++++++++|+...+..|...+ +.++....+ ..+.+++.+...... ......+...+...+..++ ...+.
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~~-~~~~~~~~~---~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~-~t~~~ 228 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYAR-GKNGITLFF---ILTALALWIKYFLSP-QPAMVFSLPAIIKLLLAAA-AMGFG 228 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccC-CCCchhHHH---HHHHHHHHHHHHHhc-CccccCCHHHHHHHHHHHH-HHHHH
Confidence 45899999999999999999999866 477765432 223333333222222 1122355667777776665 46889
Q ss_pred HHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhh
Q 016399 100 QGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL 164 (390)
Q Consensus 100 ~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 164 (390)
+.++++++++.+++.++.+.++.|++..++++++++|+++. .+++|.++.+.|+.+...
T Consensus 229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~------~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSF------SFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHhHHHHhh
Confidence 99999999999999999999999999999999999999999 799999999999988864
No 54
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.83 E-value=2.5e-08 Score=79.37 Aligned_cols=107 Identities=18% Similarity=0.361 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHH
Q 016399 238 YTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFA 317 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~ 317 (390)
+++.++.+..........+..+.+.......+...+..|+++...++.++.+++++.++ .++.+..++|+++.++++++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence 45566666666655553322222222233456667777887667999999999999995 88899999999999999999
Q ss_pred hCCCchhhHHHHHHHHHHHhhheeecCc
Q 016399 318 LGEEFYLGGIIGAVLIVVGLYLVLWGKS 345 (390)
Q Consensus 318 ~~e~~~~~~~iG~~li~~gv~l~~~~~~ 345 (390)
++|+++..+++|.+++++|++++.+.+.
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999998886543
No 55
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.75 E-value=1.7e-07 Score=87.89 Aligned_cols=137 Identities=15% Similarity=0.240 Sum_probs=106.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc---hHHHHHHHHHHHHHHHHHHhhhhccc-----CCCCCHHHHHHHHHH
Q 016399 20 LQLHLAMVALQFGYAGFHVVSRAALNMGISK---LVFPVYRNIIAFLLLLPFAYFLEKKE-----RPAMTLNFALQFILL 91 (390)
Q Consensus 20 ~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~---~~~~~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 91 (390)
..|.++++++++.|+...++.|...+. .++ ....++-..++.+.+........... ....+...+...+..
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSH-STRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL 220 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence 469999999999999999999997653 332 23333344444333333322222111 123566788888999
Q ss_pred HHHHHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHh
Q 016399 92 ALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (390)
Q Consensus 92 g~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 163 (390)
|+++..+.+.+++.++++.+++.++.+..+.|++..++++++++|+++. .+++|..+.++|+.+..
T Consensus 221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~------~~~iG~~lI~~gv~l~~ 286 (299)
T PRK11453 221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTG------LQFLGAVLIMAGLYINV 286 (299)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccH------HHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999 69999999999998875
No 56
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.70 E-value=8.8e-08 Score=90.04 Aligned_cols=140 Identities=17% Similarity=0.201 Sum_probs=107.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHhhhhcccCCC---------CCH-HHHHH
Q 016399 19 KLQLHLAMVALQFGYAGFHVVSRAALNM-GISKLVFPVYRNIIAFLLLLPFAYFLEKKERPA---------MTL-NFALQ 87 (390)
Q Consensus 19 ~~~~~l~~ll~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~---------~~~-~~~~~ 87 (390)
...|.++++++++.|+...+..|...+. +.++....++.+..+.++++++........... ... ..+..
T Consensus 143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (302)
T TIGR00817 143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV 222 (302)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence 4569999999999999999999997761 389999999999999999888876543211000 000 11111
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhh
Q 016399 88 FILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL 164 (390)
Q Consensus 88 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 164 (390)
.+..+.......+.+++.+++++++..+++...+.|+++.++++++++|+++. .+++|..+++.|+.+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~------~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISP------QQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCch------hHHHHHHHHHHHHHHHHH
Confidence 22333323344556777899999999999999999999999999999999999 699999999999999863
No 57
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.68 E-value=2.1e-08 Score=90.95 Aligned_cols=282 Identities=16% Similarity=0.175 Sum_probs=167.2
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHH
Q 016399 16 VPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVG 95 (390)
Q Consensus 16 ~~~~~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 95 (390)
..+...|.+.++.+.++.|...++-|....+ ... . . .|..+.+..-.+. +.++.|.+.
T Consensus 16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~--------------~--~ra~~gg~~yl~~--~~Ww~G~lt 73 (335)
T KOG2922|consen 16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---S--------------G--LRAGEGGYGYLKE--PLWWAGMLT 73 (335)
T ss_pred ccCceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---h--------------c--ccccCCCcchhhh--HHHHHHHHH
Confidence 3456789999999999999999999997764 110 0 0 0111111111122 456677777
Q ss_pred HHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCC
Q 016399 96 ITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAP 175 (390)
Q Consensus 96 ~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~ 175 (390)
+.++...-|.|+.+.|++..+.+..+..++.++++..++|||++. ...+|+.++++|-.+++. ..+......+
T Consensus 74 m~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~------~g~lGc~l~v~Gst~iV~-haP~e~~i~t 146 (335)
T KOG2922|consen 74 MIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNL------LGILGCVLCVVGSTTIVI-HAPKEQEIES 146 (335)
T ss_pred HHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHH------hhhhheeEEecccEEEEE-ecCccccccc
Confidence 888888999999999999999999999999999999999999999 599999999999888873 3332211000
Q ss_pred CCCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHH-------H
Q 016399 176 PLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQF-------M 248 (390)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~-------~ 248 (390)
..+ -.+... +..+ + ++..+-.+...+-....++..... +.+.......+.+..-. .
T Consensus 147 ---------~~e--l~~~~~--~~~F-l--iy~~~iil~~~il~~~~~p~~g~t-nilvyi~i~s~iGS~tV~svKalg~ 209 (335)
T KOG2922|consen 147 ---------VEE--VWELAT--EPGF-L--VYVIIIILIVLILIFFYAPRYGQT-NILVYIGICSLIGSLTVMSVKALGI 209 (335)
T ss_pred ---------HHH--HHHHhc--CccH-H--HHHHHHHHHHHHHheeeccccccc-ceeehhhHhhhhcceeeeeHHHHHH
Confidence 000 000000 1111 1 122222222222222222211111 33333333333321110 0
Q ss_pred HHHHHhcccccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhh-hHHHHHHHHHHHHhCCCch----
Q 016399 249 IIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQP-VQTLVVAIMASFALGEEFY---- 323 (390)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~-~~pv~~~l~~~~~~~e~~~---- 323 (390)
.+-.-.....+ ...+..|..++.+.. +........++|++..+++.++++.+ +-..++++-+.++|+|--.
T Consensus 210 aiklt~~g~~q---l~~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~ 285 (335)
T KOG2922|consen 210 AIKLTFSGNNQ---LFYPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDAL 285 (335)
T ss_pred HHHHHhcCCcc---cccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHH
Confidence 11111111111 112234545544444 46667777799999999987776654 5567778888889887532
Q ss_pred --hhHHHHHHHHHHHhhheeecCcch
Q 016399 324 --LGGIIGAVLIVVGLYLVLWGKSEE 347 (390)
Q Consensus 324 --~~~~iG~~li~~gv~l~~~~~~~~ 347 (390)
.....|...++.|++++...|+++
T Consensus 286 ~i~~~~~Gf~ti~~G~flL~~~kd~~ 311 (335)
T KOG2922|consen 286 DIAGELCGFVTIFLGIFLLHRTKDME 311 (335)
T ss_pred HHHHHHHhHHHhhheeeEeeeecccc
Confidence 346789999999999887555443
No 58
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.65 E-value=3.4e-07 Score=82.33 Aligned_cols=140 Identities=13% Similarity=0.212 Sum_probs=117.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccchh-ccCCchHHHHHHHHHHHH
Q 016399 202 TLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWI-FHNGGEVFSILYAGVVAS 280 (390)
Q Consensus 202 ~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~~~ 280 (390)
..|+++++.+-+.|+..-.+.|- .+..+ +.++..++.+.+......+.....+....+. ..++..+..+...+.. .
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kl-l~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i 82 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKL-LEPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I 82 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHH-HccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence 47999999999999999998877 46665 7889999999999888877776544332232 3456667777777776 7
Q ss_pred HHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecC
Q 016399 281 GIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGK 344 (390)
Q Consensus 281 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~ 344 (390)
...+..|.+|.++.....+|+-.+++|++.+++|.++++|+++..|++..++..+|+....+..
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 8999999999999999999999999999999999999999999999999999999998766433
No 59
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.55 E-value=2.2e-06 Score=82.11 Aligned_cols=139 Identities=14% Similarity=0.097 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHHHHHHH
Q 016399 203 LGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGI 282 (390)
Q Consensus 203 ~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~ 282 (390)
.-.++.++=-.+...+.+.+|...+..+-|+.++.++++++.+.+.+...........+. .....+..++..|++ +..
T Consensus 49 ~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~llp~gl~-~~~ 126 (350)
T PTZ00343 49 KLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK-SLKLFLKNFLPQGLC-HLF 126 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHHHHHH-HHH
Confidence 344555555666677788899998887558999999999998776554332111111111 012356677788886 555
Q ss_pred HHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeec
Q 016399 283 AFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWG 343 (390)
Q Consensus 283 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~ 343 (390)
.+...+.++++.+++.++++..++|++++++++++++|+++..+++|.+++++|+.+....
T Consensus 127 ~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~ 187 (350)
T PTZ00343 127 VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVK 187 (350)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecc
Confidence 6777789999999999999999999999999999999999999999999999999987753
No 60
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.54 E-value=1.1e-06 Score=73.75 Aligned_cols=133 Identities=23% Similarity=0.318 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc------CCCchHHHHHHHHHHHHHHHHHHhhhhcccCC----CC-------CHHH
Q 016399 22 LHLAMVALQFGYAGFHVVSRAALNM------GISKLVFPVYRNIIAFLLLLPFAYFLEKKERP----AM-------TLNF 84 (390)
Q Consensus 22 ~~l~~ll~~~~~~~~~~~~k~~~~~------~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~----~~-------~~~~ 84 (390)
|.++++.+.++.+...+..|..... ..++..+..+....+.+++++.....+..+.. .. +.+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 5678999999999999999998875 68899999999999999999987776543310 00 2344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhH
Q 016399 85 ALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATV 161 (390)
Q Consensus 85 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l 161 (390)
+..++..|+++ .+.+...+..++++++...+++.....+.+.++++++++|+++. .+++|+.++++|+++
T Consensus 81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~------~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITP------LQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCH------HHHHHHHHHHHHHhe
Confidence 55566667774 67888999999999999999999999999999999999999999 699999999999875
No 61
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.47 E-value=1.5e-06 Score=68.62 Aligned_cols=67 Identities=12% Similarity=0.098 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhhee
Q 016399 275 AGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVL 341 (390)
Q Consensus 275 ~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~ 341 (390)
.++++.++++.++.+++++.+.+.+..+.++.++++.+++++++||++++.+++|.+++++|+++..
T Consensus 42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3446678899999999999999999999999999999999999999999999999999999998754
No 62
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.39 E-value=4.5e-06 Score=77.91 Aligned_cols=128 Identities=20% Similarity=0.230 Sum_probs=101.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH----HHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHH
Q 016399 20 LQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNI----IAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVG 95 (390)
Q Consensus 20 ~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 95 (390)
.+|+++.+++.+.|+...+..|.. +.+|...++.... .+.+++.+. + +.++. ..+.....+..|++
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~---~--~~~~~-~~~~~~~~~~~Gi~- 220 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH---I--LAKPL-KKYAILLNILPGLM- 220 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH---h--cccch-HHHHHHHHHHHHHH-
Confidence 569999999999999999999975 3788888665554 333333222 1 11222 33444556668888
Q ss_pred HHHHHHHHHHhcc-cCCcccccccccchhHHHHHHHHHHhhccccccccCccccc----hhHHHHHhhhhHHh
Q 016399 96 ITANQGFYLLGLE-NTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKV----VGTLFCVAGATVIT 163 (390)
Q Consensus 96 ~~~~~~~~~~al~-~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~----~g~~l~~~Gv~li~ 163 (390)
....+.+|+.+.+ +.+++.++++.+..|+...+.+.+++||+.++| ++ +|.++.+.|+.++.
T Consensus 221 ~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 221 WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHh
Confidence 6889999999999 999999999999999999999999999999994 88 99999999998875
No 63
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.38 E-value=6.3e-06 Score=76.48 Aligned_cols=133 Identities=15% Similarity=0.202 Sum_probs=106.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHH-HHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHH
Q 016399 20 LQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPV-YRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA 98 (390)
Q Consensus 20 ~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 98 (390)
..|.++.+++++.|+...+..|... . .++..... +......+...+... .... .....+.+......|+++...
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~g~~~~~i 227 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFL--SGFG-APILSRAWLLLLYLGVFSTGL 227 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHh--cccc-ccCCHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999876 2 66666665 333322222222222 1111 345678888899999998778
Q ss_pred HHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHh
Q 016399 99 NQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (390)
Q Consensus 99 ~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 163 (390)
.+.++++++++.+++.++.+..+.|++..++++++++|+++. .+++|+.+.+.|+.+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~------~~~~G~~li~~g~~l~~ 286 (292)
T COG0697 228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSP------AQLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999 69999999999999886
No 64
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.33 E-value=4.7e-06 Score=65.82 Aligned_cols=70 Identities=21% Similarity=0.214 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHh
Q 016399 88 FILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (390)
Q Consensus 88 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 163 (390)
....+++++.++..++..++++.|.+.+..+.++.++++.+++++++|||++. .+++|+.++++|++++.
T Consensus 39 ~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~------~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 39 WLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSP------RHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHHHh
Confidence 34445577888999999999999999999998899999999999999999999 69999999999999874
No 65
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.25 E-value=1.1e-05 Score=65.35 Aligned_cols=118 Identities=19% Similarity=0.138 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHH
Q 016399 21 QLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQ 100 (390)
Q Consensus 21 ~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 100 (390)
.++++++++.++-+...++.|...++ .+....... . +. ..... . +...++..|++++.+++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~----~~-~~~~~---------~---~p~~~i~lgl~~~~la~ 62 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F----IA-ALLAF---------G---LALRAVLLGLAGYALSM 62 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H----HH-HHHHH---------h---ccHHHHHHHHHHHHHHH
Confidence 36889999999999999999999874 554432221 1 00 00000 0 01225777888899999
Q ss_pred HHHHHhcccCCcccccccccchhHHHHHHHHH--HhhccccccccCccccchhHHHHHhhhhHHh
Q 016399 101 GFYLLGLENTSPTFASAIQNSVPAITFLMAAI--FRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (390)
Q Consensus 101 ~~~~~al~~~~~~~~~il~~~~pi~~~ila~l--~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 163 (390)
.++.+++++.+.+.+..+.+..++++.+.++. ++||+++. .+++|+.+.++|++++.
T Consensus 63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~------~~~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSL------KKTLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCH------HHHHHHHHHHHHHHHhc
Confidence 99999999999999999998888888888885 89999999 69999999999999986
No 66
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.15 E-value=5.3e-05 Score=71.39 Aligned_cols=143 Identities=10% Similarity=0.057 Sum_probs=105.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhh-CCchhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHHHHH
Q 016399 202 TLGCVYLIGHCLSWSGWLVMQAPVLKK-YPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVAS 280 (390)
Q Consensus 202 ~~G~l~~l~s~~~~a~~~v~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~ 280 (390)
..+.++.-.-++|-+...+.+..+.++ .+.|...+++.+..-.++..+...+... ...+.......|+..+..+++ =
T Consensus 12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~-~~~~~~~~~~~~w~y~lla~~-D 89 (334)
T PF06027_consen 12 WIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRG-FKKWLKVLKRPWWKYFLLALL-D 89 (334)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccc-cccchhhcchhHHHHHHHHHH-H
Confidence 455555555666666666666665554 2246777777776666655555444322 222322234556666677875 8
Q ss_pred HHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecCcc
Q 016399 281 GIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKSE 346 (390)
Q Consensus 281 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~~~ 346 (390)
+.+..+.+.|+++++.+-+.++.....+++.+++++++++++++.+++|+++.++|+.++......
T Consensus 90 v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~ 155 (334)
T PF06027_consen 90 VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL 155 (334)
T ss_pred HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence 899999999999999999999999999999999999999999999999999999999988866543
No 67
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=98.13 E-value=7.5e-07 Score=78.69 Aligned_cols=136 Identities=12% Similarity=0.138 Sum_probs=100.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHHHHHH
Q 016399 202 TLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASG 281 (390)
Q Consensus 202 ~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~ 281 (390)
++|.++.-++ ..+....++.++.... ||......++.+-.++..+..++.... .+.......| +++=|+. +.
T Consensus 37 ~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~~~--v~gp~g~R~~--LiLRg~m-G~ 108 (346)
T KOG4510|consen 37 NLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYMQP--VIGPEGKRKW--LILRGFM-GF 108 (346)
T ss_pred ccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEeee--eecCCCcEEE--EEeehhh-hh
Confidence 4688888888 7777778887776655 466666667666666555555443222 1222222223 3334554 56
Q ss_pred HHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecCc
Q 016399 282 IAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKS 345 (390)
Q Consensus 282 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~~ 345 (390)
.+.++.+|++++++-+.+.++.+++|+++++++|++++|+.+....+|..+-+.|+++..+..-
T Consensus 109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF 172 (346)
T KOG4510|consen 109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF 172 (346)
T ss_pred hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence 6777789999999999999999999999999999999999999999999999999999886543
No 68
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.06 E-value=3.7e-05 Score=67.73 Aligned_cols=136 Identities=13% Similarity=0.063 Sum_probs=114.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHH
Q 016399 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITA 98 (390)
Q Consensus 19 ~~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 98 (390)
...|..+++.+..+|+..-+..|..... .+--.-+..-+.++.++.+|+-....... -.++.-....+..++++.++
T Consensus 146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~~--l~~p~ll~laLgvavlSSal 222 (292)
T COG5006 146 DPVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGPA--LFSPSLLPLALGVAVLSSAL 222 (292)
T ss_pred CHHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcchh--hcChHHHHHHHHHHHHhccc
Confidence 4679999999999999999999998753 55566677888899999999876433222 34556667778889999999
Q ss_pred HHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHh
Q 016399 99 NQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (390)
Q Consensus 99 ~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 163 (390)
.+.+-..+++..+....+++.++.|.+.++.++++++|+++. .||.++...+.+..=.+
T Consensus 223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~------~qwlaI~~ViaAsaG~~ 281 (292)
T COG5006 223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTL------IQWLAIAAVIAASAGST 281 (292)
T ss_pred chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCH------HHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999 69999998887766444
No 69
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=98.05 E-value=9.1e-05 Score=69.66 Aligned_cols=131 Identities=12% Similarity=0.135 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHhhhhCC-c--hhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHHHHHHHHHHHHHH
Q 016399 213 LSWSGWLVMQAPVLKKYP-A--RLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIW 289 (390)
Q Consensus 213 ~~~a~~~v~~k~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~ 289 (390)
.++..+.+++++..++.. + +..+++.++....+...+...... ........+......+++ ..++..+-+.
T Consensus 10 ~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 83 (303)
T PF08449_consen 10 GGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK-----FPKSRKIPLKKYAILSFL-FFLASVLSNA 83 (303)
T ss_pred HHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc-----ccCCCcChHHHHHHHHHH-HHHHHHHHHH
Confidence 445556677888776543 3 667888888888777776655433 111123334555556664 8888899999
Q ss_pred HHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecCcchhh
Q 016399 290 CIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKSEEKK 349 (390)
Q Consensus 290 a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~~~~~~ 349 (390)
++++++.....+.....|+.++++++++++++.+..++++++++.+|+.+....+.+..+
T Consensus 84 al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~ 143 (303)
T PF08449_consen 84 ALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS 143 (303)
T ss_pred HHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc
Confidence 999999999999999999999999999999999999999999999999998876654443
No 70
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=98.03 E-value=0.00015 Score=59.56 Aligned_cols=132 Identities=17% Similarity=0.174 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHHHHHHHH
Q 016399 204 GCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIA 283 (390)
Q Consensus 204 G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~ 283 (390)
..+++++++.+-++...++.++.++.++|+..++..+..+.+.+..+..+.++. .........|+..+ -|+ .++..
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~-lG~~~ 77 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGL-LGVFF 77 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHH-HHHHH
Confidence 357889999999999999999888887799999999999999998888876543 22222222343332 444 47777
Q ss_pred HHHHHHHHhcCCceeeee-hhhhHHHHHHHHHHH----HhCCCchhhHHHHHHHHHHHhhh
Q 016399 284 FAVQIWCIDRGGPVFVAV-YQPVQTLVVAIMASF----ALGEEFYLGGIIGAVLIVVGLYL 339 (390)
Q Consensus 284 ~~~~~~a~~~~~~~~~s~-~~~~~pv~~~l~~~~----~~~e~~~~~~~iG~~li~~gv~l 339 (390)
..+..+..++++++.... ...-+.+.+.+++.+ .-.+++++.+++|.+++++|+++
T Consensus 78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 788888999999875544 456677788888875 23467899999999999999864
No 71
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.96 E-value=6.1e-05 Score=68.31 Aligned_cols=133 Identities=21% Similarity=0.218 Sum_probs=94.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHH
Q 016399 18 EKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGIT 97 (390)
Q Consensus 18 ~~~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 97 (390)
+..++++.++++++.|.....+.|.. +.++....+-...-..+....+....++ + ...+..+.-+..|++ ..
T Consensus 135 ~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~~~---~-~~~k~~~~nil~G~~-w~ 206 (269)
T PF06800_consen 135 NMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFSKK---P-FFEKKSWKNILTGLI-WG 206 (269)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcccc---c-ccccchHHhhHHHHH-HH
Confidence 45779999999999999988888873 4788887665544433333333332211 1 222333445677777 68
Q ss_pred HHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhh
Q 016399 98 ANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGAT 160 (390)
Q Consensus 98 ~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~ 160 (390)
..+.+++.+.+..+.+.+-.+.++.+++..+-+.+++||+-+.||. ...++|+++.++|.+
T Consensus 207 ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~--~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 207 IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEM--IYTLIGLILIVIGAI 267 (269)
T ss_pred HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhH--HHHHHHHHHHHHhhh
Confidence 8999999999999999999999999999999999999998776422 223445555555544
No 72
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.84 E-value=6.7e-05 Score=59.69 Aligned_cols=69 Identities=14% Similarity=0.261 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCceeeeeh-hhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecC
Q 016399 276 GVVASGIAFAVQIWCIDRGGPVFVAVY-QPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGK 344 (390)
Q Consensus 276 gi~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~ 344 (390)
.+++.++++.++.+++++++.+.+=.+ .-+..+.+.+.++++++|++++.+++|+.+|++|++.+....
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 344578999999999999998765444 568889999999999999999999999999999998886544
No 73
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.81 E-value=0.0001 Score=68.88 Aligned_cols=119 Identities=16% Similarity=0.236 Sum_probs=88.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCc-hhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHH
Q 016399 199 KNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPA-RLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGV 277 (390)
Q Consensus 199 ~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi 277 (390)
.++..|.++++.++++.+....++|+...+.+. ... ......+......|+. |+
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~---------------------~~~~~~~~l~~~~W~~----G~ 57 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLR---------------------AGSGGRSYLRRPLWWI----GL 57 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc---------------------ccchhhHHHhhHHHHH----HH
Confidence 456789999999999999999999998776542 110 0000000001111222 23
Q ss_pred HHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheee
Q 016399 278 VASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLW 342 (390)
Q Consensus 278 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~ 342 (390)
+...++..+...|+...|.+.+++++.+..+++.+++..+++|+++...+.|.++++.|..+...
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 33445556667899999999999999999999999999999999999999999999999887654
No 74
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.72 E-value=0.00012 Score=57.39 Aligned_cols=68 Identities=16% Similarity=0.250 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHhcCCceee-eehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecC
Q 016399 277 VVASGIAFAVQIWCIDRGGPVFV-AVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGK 344 (390)
Q Consensus 277 i~~~~~~~~~~~~a~~~~~~~~~-s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~ 344 (390)
+++.++++.++..+++++|.+.+ ++..-+..+.+.+.++++|+|++++.+++|+.+|++|+++.+...
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 44578999999999999998754 334567888899999999999999999999999999999886543
No 75
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=97.71 E-value=0.011 Score=55.09 Aligned_cols=299 Identities=13% Similarity=0.091 Sum_probs=180.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhh-hhccc----CCCCCHHHHHHHHHHHH
Q 016399 19 KLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYF-LEKKE----RPAMTLNFALQFILLAL 93 (390)
Q Consensus 19 ~~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~-~~~~~----~~~~~~~~~~~~~~~g~ 93 (390)
-..|+++..+..+.-|+.++..|..-+ .+-...=.....++.+++ |+... ..-+. ....+.......++.|+
T Consensus 5 ii~Gii~h~iGg~~~~sfy~P~kkvk~--WsWEs~Wlv~gi~swli~-P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~ 81 (344)
T PF06379_consen 5 IILGIIFHAIGGFASGSFYVPFKKVKG--WSWESYWLVQGIFSWLIV-PWLWALLAIPDFFSIYSATPASTLFWTFLFGV 81 (344)
T ss_pred HHHHHHHHHHHHHHhhhhccchhhcCC--ccHHHHHHHHHHHHHHHH-HHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence 467999999999999999999998644 443333333444444433 22211 11111 12334455666677888
Q ss_pred HHHHHHHHHHHHhcccCCcccccc-cccchhHHHHHHHHHHhhccc-cccccCccccchhHHHHHhhhhHHhhhcCCccc
Q 016399 94 VGITANQGFYLLGLENTSPTFASA-IQNSVPAITFLMAAIFRIEKV-RLDRKDGIAKVVGTLFCVAGATVITLYKGPTIY 171 (390)
Q Consensus 94 ~~~~~~~~~~~~al~~~~~~~~~i-l~~~~pi~~~ila~l~l~e~~-~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~ 171 (390)
+ -......|=.+++|++.+...- ...+.-++..++-.++.++-- -..++-++.-++|++++++|+.++.. .|...+
T Consensus 82 l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~-AG~~Ke 159 (344)
T PF06379_consen 82 L-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGK-AGSMKE 159 (344)
T ss_pred H-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhH-HHHhhh
Confidence 8 5778889999999999988844 467788888888777754310 02233456789999999999999863 221111
Q ss_pred CCCCCCCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhh------hhCC-chhH----HHHHHH
Q 016399 172 SPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVL------KKYP-ARLS----VTAYTC 240 (390)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~------~~~~-~~~~----~~~~~~ 240 (390)
.. ..++.+ +.+...|.+.++++++..|.+++-..... .... +|.. .....+
T Consensus 160 ~~----------------~~~~~~--efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~ 221 (344)
T PF06379_consen 160 KE----------------LGEEAK--EFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVL 221 (344)
T ss_pred hh----------------hccchh--hhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhh
Confidence 00 011111 45667899999999999998887643211 1111 2221 222334
Q ss_pred HHHHHHHHHHHHHhcc---ccc---chhccCC---chHHHHHHHHHHHHHHHHHHHHHHHhcCCce----eeeehhhhHH
Q 016399 241 FFGLIQFMIIAAIFER---NLD---AWIFHNG---GEVFSILYAGVVASGIAFAVQIWCIDRGGPV----FVAVYQPVQT 307 (390)
Q Consensus 241 ~~~~~~~~~~~~~~~~---~~~---~~~~~~~---~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~----~~s~~~~~~p 307 (390)
..+.+..+..+++... +.. ++....+ ......++.|++ =..++++|-++-.+++.. --.+.+.+..
T Consensus 222 ~GGf~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~~sW~i~ma~~v 300 (344)
T PF06379_consen 222 WGGFITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPFSSWAIHMALIV 300 (344)
T ss_pred hhHHHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccccHHHHHHHHHHH
Confidence 4455555555554321 111 1111111 233344445554 667778888888777743 3445678888
Q ss_pred HHHHHHHHHHhCCC------chhhHHHHHHHHHHHhhheee
Q 016399 308 LVVAIMASFALGEE------FYLGGIIGAVLIVVGLYLVLW 342 (390)
Q Consensus 308 v~~~l~~~~~~~e~------~~~~~~iG~~li~~gv~l~~~ 342 (390)
+++-+++. .++|. .-...++|.++++.++.++-+
T Consensus 301 l~snvwGl-~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~ 340 (344)
T PF06379_consen 301 LFSNVWGL-ILKEWKGASKKTIRVLVLGIAVLILSVVIVGY 340 (344)
T ss_pred HHHHHHHH-HHHHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 88888886 56652 334567899998888877644
No 76
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.55 E-value=0.00033 Score=53.94 Aligned_cols=65 Identities=18% Similarity=0.289 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHhcCCce-eeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeec
Q 016399 279 ASGIAFAVQIWCIDRGGPV-FVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWG 343 (390)
Q Consensus 279 ~~~~~~~~~~~a~~~~~~~-~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~ 343 (390)
+..++|.+...++|++|.. -.++..-.-.+.+.+.++++|+|+.++.+++|..++++|++..+..
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 4678999999999999886 4577788888999999999999999999999999999999887654
No 77
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.53 E-value=0.0016 Score=50.87 Aligned_cols=64 Identities=17% Similarity=0.192 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHhcCCce-eeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhhee
Q 016399 278 VASGIAFAVQIWCIDRGGPV-FVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVL 341 (390)
Q Consensus 278 ~~~~~~~~~~~~a~~~~~~~-~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~ 341 (390)
++..+++.+...++|++|.. -.++..-+..+.+.+.++++++|++++.+++|+.+|+.|++.++
T Consensus 43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 34788999999999999986 44666678888999999999999999999999999999998764
No 78
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.49 E-value=0.0022 Score=52.71 Aligned_cols=138 Identities=14% Similarity=0.170 Sum_probs=97.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHHHHHH
Q 016399 202 TLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASG 281 (390)
Q Consensus 202 ~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~ 281 (390)
.+..+.+++++.+-.+..-.+.++.+..++|....+..+..+.+.+..+.++.++ ...+.......|+..+ -|++ ++
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~-~~~~a~~~~~pwW~~~-GG~l-Ga 80 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQG-HPGLAAVASAPWWAWI-GGLL-GA 80 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcC-CCchhhccCCchHHHH-ccch-hh
Confidence 3567889999999999999999988887789999999999999998888887433 2333322222333322 2333 33
Q ss_pred HHHHHHHHHHhcCCce-eeeehhhhHHHHHHHHHHHHhC----CCchhhHHHHHHHHHHHhhheee
Q 016399 282 IAFAVQIWCIDRGGPV-FVAVYQPVQTLVVAIMASFALG----EEFYLGGIIGAVLIVVGLYLVLW 342 (390)
Q Consensus 282 ~~~~~~~~a~~~~~~~-~~s~~~~~~pv~~~l~~~~~~~----e~~~~~~~iG~~li~~gv~l~~~ 342 (390)
+-.+.-.....+++++ .+...-.-+.+.+.+++.+=+. .+++...++|++++++|+++...
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 3334444556666665 5566677788888888876443 46899999999999999665554
No 79
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.46 E-value=0.00054 Score=53.24 Aligned_cols=66 Identities=23% Similarity=0.257 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHhcCCce-eeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheee
Q 016399 277 VVASGIAFAVQIWCIDRGGPV-FVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLW 342 (390)
Q Consensus 277 i~~~~~~~~~~~~a~~~~~~~-~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~ 342 (390)
+++..+++.+...++|++|.. -.++..-+..+.+.+.++++++|++++.+++|+.++++|++..+.
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 445789999999999999986 456667788899999999999999999999999999999988753
No 80
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.32 E-value=0.00041 Score=55.24 Aligned_cols=67 Identities=24% Similarity=0.246 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHhcccCCccccccc-ccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHh
Q 016399 91 LALVGITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (390)
Q Consensus 91 ~g~~~~~~~~~~~~~al~~~~~~~~~il-~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 163 (390)
..++++++++.++..++++.|.+.+..+ ....-+.+.+++.++++|++++ .+++|+.+.++|++.+-
T Consensus 35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~------~~~~gi~lIi~GVi~l~ 102 (120)
T PRK10452 35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSL------MKIAGLTTLVAGIVLIK 102 (120)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHHhh
Confidence 3455577899999999999999999766 5789999999999999999999 69999999999998885
No 81
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.30 E-value=0.00051 Score=53.93 Aligned_cols=66 Identities=20% Similarity=0.209 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHhcccCCccccccc-ccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHh
Q 016399 92 ALVGITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (390)
Q Consensus 92 g~~~~~~~~~~~~~al~~~~~~~~~il-~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 163 (390)
.++++.+++.++..++++.|.+.+..+ ....-+.+.+++++++||++++ .+++|+.+.++|++.+-
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~------~~~~gi~lIi~GVi~l~ 102 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL------PAIIGMMLICAGVLVIN 102 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHHHh
Confidence 455577888889999999999999666 6788999999999999999999 79999999999999985
No 82
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.30 E-value=0.0022 Score=50.19 Aligned_cols=64 Identities=17% Similarity=0.136 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHhcccCCccccccc-ccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHH
Q 016399 93 LVGITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVI 162 (390)
Q Consensus 93 ~~~~~~~~~~~~~al~~~~~~~~~il-~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li 162 (390)
++++..++.++..++++.|.+.+..+ .....+.+.+++++++||++++ .+++|+.+.+.|++.+
T Consensus 42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~------~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNR------KGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCH------HHHHHHHHHHHHHHHh
Confidence 34467888899999999999999554 6889999999999999999999 6999999999999886
No 83
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.27 E-value=0.00047 Score=53.06 Aligned_cols=66 Identities=20% Similarity=0.175 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHhcccCCcccc-cccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHh
Q 016399 92 ALVGITANQGFYLLGLENTSPTFA-SAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (390)
Q Consensus 92 g~~~~~~~~~~~~~al~~~~~~~~-~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 163 (390)
.++++..++.++-.|+++.|.+.+ ++......+.+.+.++++++|+++. .+++|+.+.++|++.+-
T Consensus 36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~------~~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSL------IKLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCH------HHHHHHHHHHHHHHHhh
Confidence 344467888899999999999999 4557899999999999999999999 69999999999999874
No 84
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.20 E-value=0.00098 Score=60.41 Aligned_cols=81 Identities=16% Similarity=0.221 Sum_probs=71.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecCc
Q 016399 266 GGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKS 345 (390)
Q Consensus 266 ~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~~ 345 (390)
+.+.+.+..-+++ ..+...+.+.++++++|+...++..+..+++.++++++++.+++..||++..++++|+.+......
T Consensus 14 ~~~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~ 92 (244)
T PF04142_consen 14 PKDTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS 92 (244)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence 3445566666665 888999999999999999999999999999999999999999999999999999999999886655
Q ss_pred ch
Q 016399 346 EE 347 (390)
Q Consensus 346 ~~ 347 (390)
..
T Consensus 93 ~~ 94 (244)
T PF04142_consen 93 QS 94 (244)
T ss_pred cc
Confidence 43
No 85
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.19 E-value=0.012 Score=55.82 Aligned_cols=146 Identities=14% Similarity=0.086 Sum_probs=97.9
Q ss_pred ccchHHHHHHHHHHHHHHHHH-------HHHHHHHhcCCCchHHHHHHHH---HHHHHHH-HHHhhh--hcccC-----C
Q 016399 17 PEKLQLHLAMVALQFGYAGFH-------VVSRAALNMGISKLVFPVYRNI---IAFLLLL-PFAYFL--EKKER-----P 78 (390)
Q Consensus 17 ~~~~~~~l~~ll~~~~~~~~~-------~~~k~~~~~~~~~~~~~~~r~~---~~~l~l~-~~~~~~--~~~~~-----~ 78 (390)
.+..+|++.++++.++++... +..+.+.+.+.++.....-.++ ++..+.- .++.++ ++++. .
T Consensus 170 ~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~ 249 (345)
T PRK13499 170 FNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADF 249 (345)
T ss_pred cchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhc
Confidence 345789999999999999988 6666654446777665555554 3333332 222221 11111 1
Q ss_pred CCC----HHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccc---cc-cchhHHHHHHHHHHhhccccccccCccccch
Q 016399 79 AMT----LNFALQFILLALVGITANQGFYLLGLENTSPTFASA---IQ-NSVPAITFLMAAIFRIEKVRLDRKDGIAKVV 150 (390)
Q Consensus 79 ~~~----~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~i---l~-~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~ 150 (390)
..+ .++....++.|++ ..+.+.+|..+-...+.+.+.+ +. ++..++..+-+. ++||+-+..||.-+.-++
T Consensus 250 ~~~~~~~~~n~l~~~l~G~~-W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~ 327 (345)
T PRK13499 250 SLAKPLLITNVLLSALAGVM-WYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSL 327 (345)
T ss_pred cccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHH
Confidence 112 3444445666777 5678888888888887666655 65 666666666666 699998877788888999
Q ss_pred hHHHHHhhhhHHhh
Q 016399 151 GTLFCVAGATVITL 164 (390)
Q Consensus 151 g~~l~~~Gv~li~~ 164 (390)
|+++.++|..++..
T Consensus 328 G~vliI~g~~lig~ 341 (345)
T PRK13499 328 GCVVIILAANIVGL 341 (345)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998864
No 86
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.18 E-value=0.00088 Score=52.07 Aligned_cols=65 Identities=11% Similarity=0.102 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHhcccCCccccccc-ccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHh
Q 016399 93 LVGITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (390)
Q Consensus 93 ~~~~~~~~~~~~~al~~~~~~~~~il-~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 163 (390)
++++..++.++..++++.|.+.+..+ .....+.+.+++++++||++++ .+++|+.+.++|++.+-
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~------~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASP------ARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHhhh
Confidence 44567888899999999999999555 6799999999999999999999 69999999999999874
No 87
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=97.12 E-value=0.0012 Score=61.63 Aligned_cols=138 Identities=15% Similarity=0.205 Sum_probs=110.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCchHHHHHHHHHHHHHHH-HHHhhhhcccC----C-CCCHHHHHHH
Q 016399 18 EKLQLHLAMVALQFGYAGFHVVSRAALN---MGISKLVFPVYRNIIAFLLLL-PFAYFLEKKER----P-AMTLNFALQF 88 (390)
Q Consensus 18 ~~~~~~l~~ll~~~~~~~~~~~~k~~~~---~~~~~~~~~~~r~~~~~l~l~-~~~~~~~~~~~----~-~~~~~~~~~~ 88 (390)
-+..|.+.++.+.+..+...++.|..+. ..++++....+..-++.++++ |+......... . ..+... ..+
T Consensus 160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~-~~~ 238 (316)
T KOG1441|consen 160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTF-LIL 238 (316)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhh-HHH
Confidence 4678999999999999999999999994 358899988888888888888 87665443222 1 223333 334
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHh
Q 016399 89 ILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (390)
Q Consensus 89 ~~~g~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 163 (390)
...+++ ..+.|..-|..+.++++-.-++....--+++...+++++++++|+ .+..|..++++|+.+-.
T Consensus 239 ~~~sv~-~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~------~n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 239 LLNSVL-AFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTF------LNALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHH-HHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCch------hhHHHHHHHHHHHHHHH
Confidence 444466 466778889999999999999999888888889999999999999 79999999999999875
No 88
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.11 E-value=0.0014 Score=51.33 Aligned_cols=110 Identities=13% Similarity=0.132 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016399 27 VALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQGFYLLG 106 (390)
Q Consensus 27 ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 106 (390)
++..++||..+.+.|.... +.++..-.. +..-.... . ..++.+.+ ++.-.-.+...|++.
T Consensus 2 l~Vg~~WG~Tnpfik~g~~-~~~~~~~~~-~~~~~~~~-----L-----------l~n~~y~i--pf~lNq~GSv~f~~~ 61 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSS-GLEKVKASL-QLLQEIKF-----L-----------LLNPKYII--PFLLNQSGSVLFFLL 61 (113)
T ss_pred eeehHHhcCchHHHHHHHh-hcCCccchH-HHHHHHHH-----H-----------HHhHHHHH--HHHHHHHHHHHHHHH
Confidence 4567899999999999987 465554431 21111111 0 11222222 222245667788999
Q ss_pred cccCCcccccccc-cchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHH
Q 016399 107 LENTSPTFASAIQ-NSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVI 162 (390)
Q Consensus 107 l~~~~~~~~~il~-~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li 162 (390)
+...+.+.+..+. ++.=++|.+.++++.+|..+. ..++|+.+.+.|+.++
T Consensus 62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~------~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISR------RTWLGMALILAGVALC 112 (113)
T ss_pred HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccch------hHHHHHHHHHcCeeee
Confidence 9999999999994 889999999998887776666 5899999999998775
No 89
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=97.09 E-value=0.0012 Score=59.59 Aligned_cols=133 Identities=17% Similarity=0.090 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHHHHHHHH
Q 016399 204 GCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIA 283 (390)
Q Consensus 204 G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~ 283 (390)
|.+.+++|+++++-..+=.|+.- ..|++....++.....+......++.+.+ .+ +.+.++-|.+ -+.+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~--~gDg~~fQw~~~~~i~~~g~~v~~~~~~p--~f-------~p~amlgG~l-W~~g 68 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFD--TGDGFFFQWVMCSGIFLVGLVVNLILGFP--PF-------YPWAMLGGAL-WATG 68 (254)
T ss_pred CchhHHHHHHHhcccceeeEecc--CCCcHHHHHHHHHHHHHHHHHHHHhcCCC--cc-------eeHHHhhhhh-hhcC
Confidence 55778899999998888766642 22677666666655555555555543211 11 1122222222 4445
Q ss_pred HHHHHHHHhcCCceeeee-hhhhHHHHHHHHHHH-HhCCCc-----hhhHHHHHHHHHHHhhheeecCcchh
Q 016399 284 FAVQIWCIDRGGPVFVAV-YQPVQTLVVAIMASF-ALGEEF-----YLGGIIGAVLIVVGLYLVLWGKSEEK 348 (390)
Q Consensus 284 ~~~~~~a~~~~~~~~~s~-~~~~~pv~~~l~~~~-~~~e~~-----~~~~~iG~~li~~gv~l~~~~~~~~~ 348 (390)
..+-.-.++.++-...-. -...+.+.+...+.+ +||++. .+..++|++++++|..++..-|.+++
T Consensus 69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~ 140 (254)
T PF07857_consen 69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEK 140 (254)
T ss_pred ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCC
Confidence 555555666665543322 345577777777755 565432 46789999999999998876665553
No 90
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.02 E-value=0.0068 Score=49.80 Aligned_cols=130 Identities=12% Similarity=0.066 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 016399 23 HLAMVALQFGYAGFHVVSRAALNMGIS-KLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG 101 (390)
Q Consensus 23 ~l~~ll~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 101 (390)
+++.+++..+.+....+.-...+. .. |...+++.+..+.+++..+....+++.....+... ++.+.-|++| ...-.
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p-~w~~lGG~lG-~~~V~ 79 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVP-WWAYLGGLLG-VFFVL 79 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCC-hHHhccHHHH-HHHHH
Confidence 566777777778888887777764 55 99999999999999998887776654333232223 3334467775 56777
Q ss_pred HHHHhcccCCcccccccc-cchhHHHHHHHHH----HhhccccccccCccccchhHHHHHhhhhH
Q 016399 102 FYLLGLENTSPTFASAIQ-NSVPAITFLMAAI----FRIEKVRLDRKDGIAKVVGTLFCVAGATV 161 (390)
Q Consensus 102 ~~~~al~~~~~~~~~il~-~~~pi~~~ila~l----~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l 161 (390)
+..+...+.+++.+..+. .-+-+...++..+ .-+++++. .+.+|+++.++|+.+
T Consensus 80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~------~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSL------RRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCH------HHHHHHHHHHHHHhC
Confidence 888888999998887765 4455555555553 23455555 799999999999864
No 91
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.00 E-value=0.0017 Score=49.44 Aligned_cols=57 Identities=25% Similarity=0.358 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHhcCCceee-eehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHH
Q 016399 277 VVASGIAFAVQIWCIDRGGPVFV-AVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLI 333 (390)
Q Consensus 277 i~~~~~~~~~~~~a~~~~~~~~~-s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li 333 (390)
+.+.++++.++.+++|+++.+.+ ++...+..+.+.+.+.+++||++++.+++|+.+|
T Consensus 36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 33578999999999999999877 5556689999999999999999999999999876
No 92
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.99 E-value=0.0036 Score=56.63 Aligned_cols=196 Identities=9% Similarity=-0.006 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 016399 22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG 101 (390)
Q Consensus 22 ~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 101 (390)
|+++++++.+++|++++-.|..-. -|++.+-++......+.-+.+...+. .+ +.+.+.++.|.+ .+..+.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~--gDg~~fQw~~~~~i~~~g~~v~~~~~---~p----~f~p~amlgG~l-W~~gN~ 70 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDT--GDGFFFQWVMCSGIFLVGLVVNLILG---FP----PFYPWAMLGGAL-WATGNI 70 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccC--CCcHHHHHHHHHHHHHHHHHHHHhcC---CC----cceeHHHhhhhh-hhcCce
Confidence 578899999999999999998644 57887777777666666555555432 12 234555666777 678888
Q ss_pred HHHHhcccCCcccccccccc-hhHHHHHHHHH-HhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCC-CCC
Q 016399 102 FYLLGLENTSPTFASAIQNS-VPAITFLMAAI-FRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAP-PLN 178 (390)
Q Consensus 102 ~~~~al~~~~~~~~~il~~~-~pi~~~ila~l-~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~-~~~ 178 (390)
+-.-.++..+.+....+-.+ .-+..-..+++ +++++...- +-.....+|+.++++|..+...-+.+....... +.+
T Consensus 71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~ 149 (254)
T PF07857_consen 71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET 149 (254)
T ss_pred eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence 99999999999999877544 55555555554 444433221 123467788888888888765433332111000 100
Q ss_pred CCCCC--CcccccccccCCC-------CCCchhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 016399 179 QIQPD--SLTSTIFLSLGDA-------KGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKK 228 (390)
Q Consensus 179 ~~~~~--~~~~~~~~~~~~~-------~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~ 228 (390)
....+ .+..+++.+..+. .......|+.+++++++.|+...+=.....++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 150 PLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred ccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence 01111 1111110000000 01245689999999999999887766654443
No 93
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=96.96 E-value=0.0049 Score=57.68 Aligned_cols=141 Identities=13% Similarity=0.169 Sum_probs=109.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCchHHHHHHHHHHHHHHHHHHhhhhc---ccCCCCCHHHHHHHHHH
Q 016399 18 EKLQLHLAMVALQFGYAGFHVVSRAALNM---GISKLVFPVYRNIIAFLLLLPFAYFLEK---KERPAMTLNFALQFILL 91 (390)
Q Consensus 18 ~~~~~~l~~ll~~~~~~~~~~~~k~~~~~---~~~~~~~~~~r~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~~~~ 91 (390)
+...|-+++++++++||...++.|.-.+. .+|--.+..+-.++.+++++|..+.... .+..-++..+....+..
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~ 323 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN 323 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence 34789999999999999999999997763 2444445555566677777765444322 22334455566667888
Q ss_pred HHHHHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhh
Q 016399 92 ALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL 164 (390)
Q Consensus 92 g~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 164 (390)
++++..++..+|..|.-.+++-.+++-..++....++.-.++.+.+.++ ..++|.+..++|-+++..
T Consensus 324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~------~~iiGsi~Ifv~Fv~vn~ 390 (416)
T KOG2765|consen 324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSA------LYIIGSIPIFVGFVIVNI 390 (416)
T ss_pred hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCH------HHHHHHHHHHHHHhheec
Confidence 9999999999999999999999999998888778888888885555555 899999999999998874
No 94
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.64 E-value=0.0024 Score=56.31 Aligned_cols=133 Identities=17% Similarity=0.119 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHHHHHHHH
Q 016399 204 GCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIA 283 (390)
Q Consensus 204 G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~ 283 (390)
..+.+++-++.|+..-....|. .++|.+.+.-+.+.+.+..+.+.++..+. .+...+..-+..|.+ =.++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~~~p~------~T~~~~iv~~isG~~-Ws~G 72 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLFVSPE------LTLTIFIVGFISGAF-WSFG 72 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHheeecCc------cchhhHHHHHHhhhH-hhhh
Confidence 5688999999999887764442 22466655555555555555444432111 133334444555554 6789
Q ss_pred HHHHHHHHhcCCceeeeehhh-hHHHHHHHHHHHHhCCCchhhHH----HHHHHHHHHhhheeecCcc
Q 016399 284 FAVQIWCIDRGGPVFVAVYQP-VQTLVVAIMASFALGEEFYLGGI----IGAVLIVVGLYLVLWGKSE 346 (390)
Q Consensus 284 ~~~~~~a~~~~~~~~~s~~~~-~~pv~~~l~~~~~~~e~~~~~~~----iG~~li~~gv~l~~~~~~~ 346 (390)
+..++++++..+++++.++.. ++-+-+.+++.++|||..+..+. ++.+++++|+++-.+.++.
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~ 140 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRN 140 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccc
Confidence 999999999999999988854 67777889999999999887654 4667888888877765543
No 95
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.64 E-value=0.024 Score=44.45 Aligned_cols=110 Identities=8% Similarity=0.016 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHHHHHHHHHHHHH
Q 016399 209 IGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQI 288 (390)
Q Consensus 209 l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~ 288 (390)
++.+++|+..+-+.|+..+..++ ..-.. +..-.... ++ .++..+ +....+..+-.+|+
T Consensus 2 l~Vg~~WG~Tnpfik~g~~~~~~-~~~~~-~~~~~~~~-----Ll----------~n~~y~-----ipf~lNq~GSv~f~ 59 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSSGLEK-VKASL-QLLQEIKF-----LL----------LNPKYI-----IPFLLNQSGSVLFF 59 (113)
T ss_pred eeehHHhcCchHHHHHHHhhcCC-ccchH-HHHHHHHH-----HH----------HhHHHH-----HHHHHHHHHHHHHH
Confidence 35678999999999998877652 22211 11111111 10 121111 13334667777888
Q ss_pred HHHhcCCceeeeeh-hhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhhe
Q 016399 289 WCIDRGGPVFVAVY-QPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLV 340 (390)
Q Consensus 289 ~a~~~~~~~~~s~~-~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~ 340 (390)
+.+.+.+-+.+.++ ..+.-+++++.++++.+|..+...++|++++++|+.+.
T Consensus 60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 99999999988888 58999999999988777778899999999999998764
No 96
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.29 E-value=0.17 Score=47.41 Aligned_cols=141 Identities=14% Similarity=0.099 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCC---chhHHHHHHHHHHHHHHHHHHHHhccc--------ccchhccCCchHHHH
Q 016399 204 GCVYLIGHCLSWSGWLVMQAPVLKKYP---ARLSVTAYTCFFGLIQFMIIAAIFERN--------LDAWIFHNGGEVFSI 272 (390)
Q Consensus 204 G~l~~l~s~~~~a~~~v~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l 272 (390)
=.+..+...+.++......|...++.+ .|.+..+..-+.-.+++..+.+...+. .+..-...+.+...+
T Consensus 16 k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~ 95 (345)
T KOG2234|consen 16 KYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKV 95 (345)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHH
Confidence 344555556666666666666544332 344555555555566666555543211 111112223233344
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecCc
Q 016399 273 LYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKS 345 (390)
Q Consensus 273 ~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~~ 345 (390)
..-+++ ..+...+++.++.+.++++..+...+..+.+.++..++++++.+..||...++...|+.+.+....
T Consensus 96 ~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 96 SVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCC
Confidence 444443 667777999999999999999999999999999999999999999999999999999999884433
No 97
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.22 E-value=0.0066 Score=46.24 Aligned_cols=57 Identities=25% Similarity=0.201 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHhcccCCccccccc-ccchhHHHHHHHHHHhhccccccccCccccchhHHH
Q 016399 92 ALVGITANQGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLF 154 (390)
Q Consensus 92 g~~~~~~~~~~~~~al~~~~~~~~~il-~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l 154 (390)
.+.++..+..++..++++.|.+.+..+ ..+..+.+.+++.+++||++|. .+++|+.+
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~------~~~~gi~l 92 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSL------SKWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHhheee
Confidence 344577888999999999999999665 5799999999999999999999 69988765
No 98
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.76 E-value=0.11 Score=47.98 Aligned_cols=138 Identities=16% Similarity=0.207 Sum_probs=108.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHhhhhccc-----C-CCCCHHHHHHHHHH
Q 016399 19 KLQLHLAMVALQFGYAGFHVVSRAALNM-GISKLVFPVYRNIIAFLLLLPFAYFLEKKE-----R-PAMTLNFALQFILL 91 (390)
Q Consensus 19 ~~~~~l~~ll~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~-----~-~~~~~~~~~~~~~~ 91 (390)
+..|+.++....+.-+...+..|...+. +.+.+.+.++..+++.+.+....+..+... . .......+..+...
T Consensus 155 ~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lS 234 (314)
T KOG1444|consen 155 NLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLS 234 (314)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHH
Confidence 4458899999999999999999988873 577888999999999999888775544311 1 12223445667888
Q ss_pred HHHHHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHh
Q 016399 92 ALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (390)
Q Consensus 92 g~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 163 (390)
++++..+++ +.+.+.+..++...++.....-..+.+...++.++++++ ...+|+.+++.|.++-.
T Consensus 235 cv~gf~isy-~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~------~n~~gll~~~~ggv~Y~ 299 (314)
T KOG1444|consen 235 CVMGFGISY-TSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTF------LNVIGLLVGFFGGVLYS 299 (314)
T ss_pred HHHHHHHHH-HHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceech------hhhHHHHHHhhhhhHHh
Confidence 888766555 788899999999888888777777888888888898998 89999999999988865
No 99
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.47 E-value=0.17 Score=41.78 Aligned_cols=139 Identities=12% Similarity=0.015 Sum_probs=83.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHH
Q 016399 20 LQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITAN 99 (390)
Q Consensus 20 ~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 99 (390)
....+..+++..+-.....+.-......-+|....+..+.++..++..+.+..+++......++.-++.+.-|++| +.+
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~~ 82 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AIF 82 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hhh
Confidence 4556677777777777777777766642348888899999988888887776433322221222223344455554 444
Q ss_pred HHHHHHhcccCCccccccc-ccchhHHHHHHHHHH-hhccccccccCccccchhHHHHHhhhhHH
Q 016399 100 QGFYLLGLENTSPTFASAI-QNSVPAITFLMAAIF-RIEKVRLDRKDGIAKVVGTLFCVAGATVI 162 (390)
Q Consensus 100 ~~~~~~al~~~~~~~~~il-~~~~pi~~~ila~l~-l~e~~~~~~~~~~~~~~g~~l~~~Gv~li 162 (390)
-..-.......+++....+ ..-+-+...++-.+= +++ .+++++..+++|+++.++|+.++
T Consensus 83 vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~---~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 83 VTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGV---PKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred hhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCC---CcCCCCHHHHHHHHHHHHHHHHh
Confidence 4444555566665555444 333444444444321 233 45666668999999999995554
No 100
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=94.87 E-value=0.21 Score=46.79 Aligned_cols=141 Identities=10% Similarity=0.006 Sum_probs=88.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHH--H-hcccccchhccCCchHHHHHHH
Q 016399 199 KNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAA--I-FERNLDAWIFHNGGEVFSILYA 275 (390)
Q Consensus 199 ~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~l~~~ 275 (390)
.+...|+++..+++++.+.+.+=.||. |+.+ ++.......+-..+..|... + .++..+.....+...+....+.
T Consensus 3 ~~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws--WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~ 79 (344)
T PF06379_consen 3 SAIILGIIFHAIGGFASGSFYVPFKKV-KGWS--WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLF 79 (344)
T ss_pred chHHHHHHHHHHHHHHhhhhccchhhc-CCcc--HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence 455789999999999999999987773 4442 33332222222222222222 1 1211222333344556666777
Q ss_pred HHHHHHHHHHHHHHHHhcCCce-eeeehhhhHHHHHHHHHHHHhCC-------CchhhHHHHHHHHHHHhhheeec
Q 016399 276 GVVASGIAFAVQIWCIDRGGPV-FVAVYQPVQTLVVAIMASFALGE-------EFYLGGIIGAVLIVVGLYLVLWG 343 (390)
Q Consensus 276 gi~~~~~~~~~~~~a~~~~~~~-~~s~~~~~~pv~~~l~~~~~~~e-------~~~~~~~iG~~li~~gv~l~~~~ 343 (390)
|++ =+++-..|-.++|+++.+ -.++..-+..+++.++--++.|+ +-....++|.++.++|+.+.-+.
T Consensus 80 G~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A 154 (344)
T PF06379_consen 80 GVL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA 154 (344)
T ss_pred HHH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence 776 778888889999999876 44555566666666665555332 22356788999999999887654
No 101
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.62 E-value=0.019 Score=52.92 Aligned_cols=124 Identities=21% Similarity=0.266 Sum_probs=89.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHH
Q 016399 198 GKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGV 277 (390)
Q Consensus 198 ~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi 277 (390)
..++..|.++++.+.+..+...++.|+..++... ...+. .++.. ... ..+. |+ .|+
T Consensus 16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~~~ra-------------~~gg~-~yl-~~~~-Ww----~G~ 71 (335)
T KOG2922|consen 16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----SGLRA-------------GEGGY-GYL-KEPL-WW----AGM 71 (335)
T ss_pred ccCceeeeeehhhccEEEeeehhhhHHHHHHHhh----hcccc-------------cCCCc-chh-hhHH-HH----HHH
Confidence 3556789999999999999999998887776531 00000 01111 111 1111 22 355
Q ss_pred HHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecCc
Q 016399 278 VASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKS 345 (390)
Q Consensus 278 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~~ 345 (390)
+..+++-.+-+-|....|++.+++++.++.+.+.+++..+++|++++...+|+++.++|..++.....
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP 139 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAP 139 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecC
Confidence 55566666666677788999999999999999999999999999999999999999999876654333
No 102
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=94.40 E-value=0.3 Score=44.84 Aligned_cols=139 Identities=12% Similarity=0.101 Sum_probs=108.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCchHHHHHHHHHHHHHHHHHHhhhhcccC-----CCCCHHHHHHHHHH
Q 016399 18 EKLQLHLAMVALQFGYAGFHVVSRAALN-MGISKLVFPVYRNIIAFLLLLPFAYFLEKKER-----PAMTLNFALQFILL 91 (390)
Q Consensus 18 ~~~~~~l~~ll~~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 91 (390)
+...|+.++....++=|..+........ ..+++..+.+.-.++.++.-.......+ ..+ -+..+..++-.++.
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg-~~~~av~F~~~hp~~~~Di~l~ 247 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQG-HLLPAVSFIKEHPDVAFDILLY 247 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCC-CCchHHHHHHcChhHHHHHHHH
Confidence 4577899888888888887777766665 3578888888888887777665533222 111 23455667778888
Q ss_pred HHHHHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhh
Q 016399 92 ALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL 164 (390)
Q Consensus 92 g~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 164 (390)
+.+| +.++.+.++-++.-++-.-+.+..+--++..+++.+.++.+++. .||+|+.+.+.|+.+=+.
T Consensus 248 s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~------~q~~g~~iVFg~i~l~~~ 313 (327)
T KOG1581|consen 248 STCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSS------EQWLGVLIVFGGIFLEIL 313 (327)
T ss_pred HHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccch------hhccCeeeehHHHHHHHH
Confidence 8886 67787888888888888888888999999999999999999999 699999999999988654
No 103
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=94.04 E-value=0.062 Score=45.92 Aligned_cols=66 Identities=18% Similarity=0.248 Sum_probs=59.9
Q ss_pred HHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecCcch
Q 016399 282 IAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKSEE 347 (390)
Q Consensus 282 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~~~~ 347 (390)
.+..+|..++++++++.++.+..-+..+..+++++++|+++...+++.+++.+.|+++..+.....
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~ 130 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH 130 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh
Confidence 456778899999999999999999999999999999999999999999999999999888766543
No 104
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=93.99 E-value=0.11 Score=46.32 Aligned_cols=60 Identities=8% Similarity=-0.058 Sum_probs=53.0
Q ss_pred HHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhH
Q 016399 96 ITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATV 161 (390)
Q Consensus 96 ~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l 161 (390)
.+....+....+++.+....++...+.++++.+++.++++|+++. .+++|+.+.+.|+.+
T Consensus 162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~------~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISS------TFYLGAILVFLATFL 221 (222)
T ss_pred HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccH------HHHHHHHHHHeeeEe
Confidence 355666788899999999999999999999999999999999999 799999999988653
No 105
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=93.81 E-value=0.62 Score=42.87 Aligned_cols=125 Identities=12% Similarity=0.201 Sum_probs=87.5
Q ss_pred HHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccc-hhccCCchHH-HHHHHHHHHHHHHHHHHHHHHhcCCcee
Q 016399 221 MQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDA-WIFHNGGEVF-SILYAGVVASGIAFAVQIWCIDRGGPVF 298 (390)
Q Consensus 221 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~l~~~gi~~~~~~~~~~~~a~~~~~~~~ 298 (390)
+.+...++.+=|+.++.+++.+-...............+. ....++.... .+.-.|+ ++++-..+-++++++++.+.
T Consensus 34 ~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlSl 112 (349)
T KOG1443|consen 34 YFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLSL 112 (349)
T ss_pred HhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeeee
Confidence 3444445555577777777766666555554444332211 1111222222 2223444 57788888899999999999
Q ss_pred eeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecCcc
Q 016399 299 VAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKSE 346 (390)
Q Consensus 299 ~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~~~ 346 (390)
.++.-...++|..+++.++-=|+++|....-..+|-+|+++..++..+
T Consensus 113 YTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq 160 (349)
T KOG1443|consen 113 YTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ 160 (349)
T ss_pred eeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc
Confidence 999999999999999999999999999999999999999988875543
No 106
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=93.31 E-value=0.28 Score=42.93 Aligned_cols=136 Identities=15% Similarity=0.183 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-cCCCchHHHHHHHHHHHHHHHHHHhhhhcccCC----CCCHHHHHHHHHHHHHHH
Q 016399 22 LHLAMVALQFGYAGFHVVSRAALN-MGISKLVFPVYRNIIAFLLLLPFAYFLEKKERP----AMTLNFALQFILLALVGI 96 (390)
Q Consensus 22 ~~l~~ll~~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~ 96 (390)
|++++....+.-+..-...|...+ .+...++..++..+++..+++.+.+..+.+... ..+.......+..|++..
T Consensus 156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~sv 235 (309)
T COG5070 156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSV 235 (309)
T ss_pred ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHh
Confidence 455555555544444444554443 246677888999999999998887765543321 223333445666777754
Q ss_pred HHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhh
Q 016399 97 TANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL 164 (390)
Q Consensus 97 ~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 164 (390)
. -..+.-++++-++.+..+++..+.-.-..+-+.++++|+.+. .++.++++++...++-..
T Consensus 236 g-iSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf------~si~sillGflsg~iYav 296 (309)
T COG5070 236 G-ISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNF------LSIFSILLGFLSGAIYAV 296 (309)
T ss_pred h-hhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhH------HHHHHHHHHHHHHHHHHH
Confidence 4 444777888888988889998888888899999999999999 799999999887776543
No 107
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=92.77 E-value=0.1 Score=47.76 Aligned_cols=130 Identities=12% Similarity=0.051 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccc-----------cchhccCCchHHHHHHHHH
Q 016399 209 IGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNL-----------DAWIFHNGGEVFSILYAGV 277 (390)
Q Consensus 209 l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~l~~~gi 277 (390)
+++.+||+-+...+|-..|+.. ....++|-+.++.++..++..+.-... +.....++..+...+.-|+
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR-~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv 80 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGR-LPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV 80 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCC-ccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence 4678899999888777655543 223566666666666555544321111 1112222333334444444
Q ss_pred HHHHHHHHHHHHHHhcCCceeeeehh-hhHHHHHHHHHHHHhCCCch--hhHHHHHHHHHHHhhhee
Q 016399 278 VASGIAFAVQIWCIDRGGPVFVAVYQ-PVQTLVVAIMASFALGEEFY--LGGIIGAVLIVVGLYLVL 341 (390)
Q Consensus 278 ~~~~~~~~~~~~a~~~~~~~~~s~~~-~~~pv~~~l~~~~~~~e~~~--~~~~iG~~li~~gv~l~~ 341 (390)
..-++..+..+++...+-+.+-++. .+..++++.+.| +++.+.+ ...+.|.+++++++++-.
T Consensus 81 -vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NY-fld~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 81 -VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNY-FLDPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred -hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeee-eccCCCCCceEEEccHHHHHHHHHHHH
Confidence 4677888888888887766555443 233344555555 3444443 355679999998887754
No 108
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=92.06 E-value=0.35 Score=43.73 Aligned_cols=142 Identities=18% Similarity=0.164 Sum_probs=102.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHhhhhccc----CCCC-CHHHHHHHHHHH
Q 016399 19 KLQLHLAMVALQFGYAGFHVVSRAALNM-GISKLVFPVYRNIIAFLLLLPFAYFLEKKE----RPAM-TLNFALQFILLA 92 (390)
Q Consensus 19 ~~~~~l~~ll~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~----~~~~-~~~~~~~~~~~g 92 (390)
...|+++-+++++.-+.+.+..|..+.. +-.-+.++++..+.+.++++|...+.+.-. .++. ..+.|..+.+.|
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg 262 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG 262 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence 4679999999999999999999976653 123567889999999999999987765421 1222 566777788888
Q ss_pred HHHHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcC
Q 016399 93 LVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKG 167 (390)
Q Consensus 93 ~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~ 167 (390)
++|+.+++.. ..=++-++|-.-.+=...-..--.+++..+++|..+. ..|-+.++.++|-..-+.-++
T Consensus 263 lfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~------lwwtsn~~vLvgs~~YT~vk~ 330 (347)
T KOG1442|consen 263 LFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSG------LWWTSNIVVLVGSLAYTLVKE 330 (347)
T ss_pred HHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhh------heeeeeEEEEehhHHHHHHHH
Confidence 8876665532 2334445554444444445566778899999999988 789999999998877664443
No 109
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=91.52 E-value=2.1 Score=37.93 Aligned_cols=136 Identities=15% Similarity=0.055 Sum_probs=88.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--hHHHHHHHHHHHHHHHHHHhhhhc-ccC---CCCCHHHHHHHHHHHH
Q 016399 20 LQLHLAMVALQFGYAGFHVVSRAALNMGISK--LVFPVYRNIIAFLLLLPFAYFLEK-KER---PAMTLNFALQFILLAL 93 (390)
Q Consensus 20 ~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~--~~~~~~r~~~~~l~l~~~~~~~~~-~~~---~~~~~~~~~~~~~~g~ 93 (390)
..|-++++++..+=|......-..-.+ ..+ -.+.+.-.+-+.+.+..-..+.+. ++. ....+..|+-+..+++
T Consensus 171 g~GElLL~lSL~mDGlTg~~Qdrira~-yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai 249 (337)
T KOG1580|consen 171 GFGELLLILSLAMDGLTGSIQDRIRAS-YQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI 249 (337)
T ss_pred chHHHHHHHHHHhcccchhHHHHHHHh-hccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH
Confidence 456777777777777766655443332 222 222222233333332221111110 000 0011234555667777
Q ss_pred HHHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHh
Q 016399 94 VGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (390)
Q Consensus 94 ~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 163 (390)
. .++++.+.+.-+.+-+|-.-+++..+.-+|+.+.+.++++.+++. .||+|..+.+.|...=.
T Consensus 250 ~-s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~------rQwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 250 A-SCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSG------RQWLGTVLVFSALTADV 312 (337)
T ss_pred H-HHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcH------HHHHHHHHHHHHhhhHh
Confidence 7 478888999999999999999999999999999999999999999 49999999999988765
No 110
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=89.38 E-value=0.55 Score=43.14 Aligned_cols=129 Identities=12% Similarity=0.016 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhh-hhcc-----cC-------CCCCHHHHHHHHHHH
Q 016399 26 MVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYF-LEKK-----ER-------PAMTLNFALQFILLA 92 (390)
Q Consensus 26 ~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~-~~~~-----~~-------~~~~~~~~~~~~~~g 92 (390)
|+++.++||++....|++-.. -...+...+-+.++.++..++.-+ ...- .. ...++..+...+.-|
T Consensus 1 M~itmlcwGSW~nt~kL~~r~-gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAERR-GRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHHhc-CCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 467889999999999998764 333334566666666655444322 1111 11 133555555566666
Q ss_pred HHHHHHHHHHHHHhcccCCcccccccc-cchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhH
Q 016399 93 LVGITANQGFYLLGLENTSPTFASAIQ-NSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATV 161 (390)
Q Consensus 93 ~~~~~~~~~~~~~al~~~~~~~~~il~-~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l 161 (390)
++ .-+.+++..+|+.+.+.+.+-++. .+.-+...++-+ |+..|.+.- ..-..|+.+.++.+++
T Consensus 80 vv-fnlgNillq~aia~aGmSVafpvg~glalVlGv~~NY-fld~~~n~a----~iLF~GV~cf~iAI~l 143 (336)
T PF07168_consen 80 VV-FNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNY-FLDPKINRA----EILFPGVACFLIAIIL 143 (336)
T ss_pred Hh-hhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeee-eccCCCCCc----eEEEccHHHHHHHHHH
Confidence 66 678999999999999998887775 444444444444 445555421 0233455555544444
No 111
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=88.14 E-value=0.15 Score=46.03 Aligned_cols=17 Identities=6% Similarity=-0.029 Sum_probs=0.0
Q ss_pred ccchhHHHHHhhhhHHh
Q 016399 147 AKVVGTLFCVAGATVIT 163 (390)
Q Consensus 147 ~~~~g~~l~~~Gv~li~ 163 (390)
...+++++.++-..+..
T Consensus 80 LGlLCiilimi~lLv~~ 96 (381)
T PF05297_consen 80 LGLLCIILIMIVLLVSM 96 (381)
T ss_dssp -----------------
T ss_pred chHHHHHHHHHHHHHHH
Confidence 55666666555544443
No 112
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=87.56 E-value=11 Score=28.94 Aligned_cols=112 Identities=15% Similarity=0.239 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC------chHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHH
Q 016399 24 LAMVALQFGYAGFHVVSRAALNMGIS------KLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGIT 97 (390)
Q Consensus 24 l~~ll~~~~~~~~~~~~k~~~~~~~~------~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 97 (390)
.-++...++||..+.+.|.... +.+ .....++|-..... .++++ ++.. .++.
T Consensus 6 ~~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~lqe~~tl~----------------l~w~Y---~iPF-llNq- 63 (125)
T KOG4831|consen 6 DKLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIALQEMKTLF----------------LNWEY---LIPF-LLNQ- 63 (125)
T ss_pred HHHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHHHHHHHHHH----------------HhHHH---HHHH-HHHH-
Confidence 3467788999999999998765 333 22222333222111 12222 2222 2222
Q ss_pred HHHHHHHHhcccCCcccccccc-cchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHh
Q 016399 98 ANQGFYLLGLENTSPTFASAIQ-NSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (390)
Q Consensus 98 ~~~~~~~~al~~~~~~~~~il~-~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 163 (390)
....+||.-+++.+.+.+..+. ++.-.|+.+.+..+ +|+..-| ..+.|..+..+|+.+++
T Consensus 64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~-----~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGG-----LALLGTSLIVFGIWLCI 124 (125)
T ss_pred hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccc-----eeehhhhHHhhhhhhee
Confidence 3445788899999999998885 66778888888654 6666554 78999999999988764
No 113
>PRK02237 hypothetical protein; Provisional
Probab=85.27 E-value=4.8 Score=31.10 Aligned_cols=48 Identities=19% Similarity=0.172 Sum_probs=40.9
Q ss_pred eeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecCc
Q 016399 298 FVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKS 345 (390)
Q Consensus 298 ~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~~ 345 (390)
..+.++-.-.+.++++.+.+-|++|+...++|..+.++|+.+..+..+
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR 108 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR 108 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence 345667778889999999999999999999999999999987765543
No 114
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=84.90 E-value=8.9 Score=35.12 Aligned_cols=65 Identities=9% Similarity=0.087 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeec
Q 016399 279 ASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWG 343 (390)
Q Consensus 279 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~ 343 (390)
+-..+-.+.+.++..++++...++.-...+|+-+++.-+++..++..+|+|+..+.+|++.+-..
T Consensus 95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 35666677788999999999999999999999999999999999999999999999998876643
No 115
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=84.53 E-value=4.8 Score=31.00 Aligned_cols=47 Identities=21% Similarity=0.240 Sum_probs=40.6
Q ss_pred eeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecCc
Q 016399 299 VAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKS 345 (390)
Q Consensus 299 ~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~~ 345 (390)
.+.++-.-.+.++++++.+-+++|+...++|..+.++|+.+..+..|
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 45566777888999999999999999999999999999988876654
No 116
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=82.61 E-value=0.14 Score=45.72 Aligned_cols=120 Identities=14% Similarity=0.121 Sum_probs=87.5
Q ss_pred HHHHHHhhhh-CCchhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Q 016399 219 LVMQAPVLKK-YPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPV 297 (390)
Q Consensus 219 ~v~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~ 297 (390)
...+..+.++ .+.|...++..+..-.++-.++..+...... .-|-.-++.+++ -+=+.++..+|.|+.+-+
T Consensus 34 a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~~-------~~~~hYilla~~-DVEaNy~vV~AyQyTsmt 105 (336)
T KOG2766|consen 34 AFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKYIK-------AKWRHYILLAFV-DVEANYFVVKAYQYTSMT 105 (336)
T ss_pred hhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHHHH-------HHHHHhhheeEE-eecccEEEeeehhhcchH
Confidence 3334444444 4457777777777777777777776432111 113334455554 666777778899999999
Q ss_pred eeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecCcc
Q 016399 298 FVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKSE 346 (390)
Q Consensus 298 ~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~~~ 346 (390)
-+.++..-..+...+++|++++.+..+.++.|.++.++|++++......
T Consensus 106 Si~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~ 154 (336)
T KOG2766|consen 106 SIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVH 154 (336)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeec
Confidence 9999999999999999999999999999999999999999887754443
No 117
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=80.70 E-value=41 Score=32.43 Aligned_cols=20 Identities=5% Similarity=0.042 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 016399 269 VFSILYAGVVASGIAFAVQI 288 (390)
Q Consensus 269 ~~~l~~~gi~~~~~~~~~~~ 288 (390)
++.+...+++...+++.+..
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~ 81 (385)
T PF03547_consen 62 LWFIPVFAFIIFILGLLLGF 81 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 33333333333444444433
No 118
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=78.15 E-value=46 Score=29.04 Aligned_cols=31 Identities=13% Similarity=0.221 Sum_probs=18.7
Q ss_pred HHHHHHHhCCCchhhHHHHHHHHH--HHhhhee
Q 016399 311 AIMASFALGEEFYLGGIIGAVLIV--VGLYLVL 341 (390)
Q Consensus 311 ~l~~~~~~~e~~~~~~~iG~~li~--~gv~l~~ 341 (390)
-.+|..++++-.-+-+.+|..+.+ +|.+...
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La 165 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLA 165 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344666777766677777777654 3444444
No 119
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=76.89 E-value=10 Score=34.59 Aligned_cols=140 Identities=16% Similarity=0.099 Sum_probs=89.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCchHHHHHHHHHHHHHHHHHHhhhhcccC-----CCCCHHHHHHHHHHHH
Q 016399 20 LQLHLAMVALQFGYAGFHVVSRAALN-MGISKLVFPVYRNIIAFLLLLPFAYFLEKKER-----PAMTLNFALQFILLAL 93 (390)
Q Consensus 20 ~~~~l~~ll~~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~ 93 (390)
..|+.+.-.+.+.=+...-+...... +.-+..+++++.+.+++.+++..+.....-.. ...+.+.+.+.++.+.
T Consensus 189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~ 268 (367)
T KOG1582|consen 189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL 268 (367)
T ss_pred eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH
Confidence 45555555555555555545444443 23456778888888888888777655432110 1234445555555555
Q ss_pred HHHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhc
Q 016399 94 VGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYK 166 (390)
Q Consensus 94 ~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~ 166 (390)
.++ +.......=++.-++..++.+....--+|.+++++++..+++. ...-+.++.+.|+++=...+
T Consensus 269 ~gy-lG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~------qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 269 AGY-LGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTE------QYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HhH-hhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHH------HHhhhhHHHHHHHHhhcccC
Confidence 543 3333333334445677777777778889999999998888888 67888888999999876433
No 120
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=76.81 E-value=3.9 Score=31.38 Aligned_cols=31 Identities=23% Similarity=0.375 Sum_probs=26.7
Q ss_pred HHHHHHHhCCCchhhHHHHHHHHHHHhhhee
Q 016399 311 AIMASFALGEEFYLGGIIGAVLIVVGLYLVL 341 (390)
Q Consensus 311 ~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~ 341 (390)
..++.++++|++++....|.++++.+++...
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF 107 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFIF 107 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence 4567789999999999999999999987654
No 121
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=75.48 E-value=46 Score=29.16 Aligned_cols=47 Identities=11% Similarity=0.101 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCcccccccccchhHHHHHHHHHHh
Q 016399 84 FALQFILLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFR 134 (390)
Q Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l 134 (390)
.++..+..++.. .+.+...+.....+++..... +.|....+++.+.+
T Consensus 145 ~~~k~~~~~~~~-~~~w~~~~~~~~~lp~~inp~---l~~~~~iiig~i~~ 191 (206)
T PF06570_consen 145 SWWKYILISVLA-MVLWIVIFVLTSFLPPVINPV---LPPWVYIIIGVIAF 191 (206)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHccccCCcC---CCHHHHHHHHHHHH
Confidence 333434444442 334444444555566554433 34555555555443
No 122
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=72.58 E-value=1.2e+02 Score=31.34 Aligned_cols=16 Identities=31% Similarity=0.613 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHhhh
Q 016399 57 RNIIAFLLLLPFAYFL 72 (390)
Q Consensus 57 r~~~~~l~l~~~~~~~ 72 (390)
...+++.++..+..+.
T Consensus 276 ~lviG~~~Lv~F~~wE 291 (599)
T PF06609_consen 276 PLVIGFVLLVAFVVWE 291 (599)
T ss_pred hHHHHHHHHHHHHHhh
Confidence 3445555555555554
No 123
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=70.53 E-value=15 Score=28.22 Aligned_cols=60 Identities=17% Similarity=0.145 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhcCCceeeeeh-hhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhhee
Q 016399 282 IAFAVQIWCIDRGGPVFVAVY-QPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVL 341 (390)
Q Consensus 282 ~~~~~~~~a~~~~~~~~~s~~-~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~ 341 (390)
.+-.+|+.-+++.+-+.+..+ ..+.-.++.+.+..+-.|......++|..++++|+.+..
T Consensus 64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 344566777888888766655 566888899999754444567778999999999998754
No 124
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=68.42 E-value=12 Score=28.22 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=28.4
Q ss_pred HHHHHHHHhCCCchhhHHHHHHHHHHHhhheee
Q 016399 310 VAIMASFALGEEFYLGGIIGAVLIVVGLYLVLW 342 (390)
Q Consensus 310 ~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~ 342 (390)
=+.++.+.++|++.+..+.|..+++.|++...+
T Consensus 83 Fv~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 83 FVPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 345788899999999999999999999987653
No 125
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=67.93 E-value=25 Score=26.97 Aligned_cols=48 Identities=21% Similarity=0.184 Sum_probs=40.7
Q ss_pred eeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecCc
Q 016399 298 FVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKS 345 (390)
Q Consensus 298 ~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~~ 345 (390)
..+.++-+..+.+.++.+.+=+..|+...++|..+.++|+.++....+
T Consensus 60 vYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 60 VYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred HHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 345667788889999999999999999999999999999888776654
No 126
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=63.98 E-value=76 Score=29.25 Aligned_cols=133 Identities=14% Similarity=0.099 Sum_probs=86.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCchHHHHHHHHHHHHHHHHHHhh-------hhccc---CCCC---CHHHH
Q 016399 20 LQLHLAMVALQFGYAGFHVVSRAALN-MGISKLVFPVYRNIIAFLLLLPFAYF-------LEKKE---RPAM---TLNFA 85 (390)
Q Consensus 20 ~~~~l~~ll~~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~-------~~~~~---~~~~---~~~~~ 85 (390)
..|+.++.++.+.-+...+......+ +|=++-+..++...+....++...-= ..+.+ .|.. -+..|
T Consensus 163 ~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~ 242 (330)
T KOG1583|consen 163 LIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMW 242 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHH
Confidence 46788888888888888877766655 36678899999988887776544210 00111 0111 11222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccc----CCcccccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhH
Q 016399 86 LQFILLALVGITANQGFYLLGLEN----TSPTFASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATV 161 (390)
Q Consensus 86 ~~~~~~g~~~~~~~~~~~~~al~~----~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l 161 (390)
.+++. .++.+..-..+... ++.-++++...+.-.+..+++.+.++.++++ ..|+|.++.+.|..+
T Consensus 243 ~yLl~-----n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~------~h~lGa~lVF~Gt~~ 311 (330)
T KOG1583|consen 243 VYLLF-----NVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTP------WHWLGAALVFFGTLL 311 (330)
T ss_pred HHHHH-----HHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCH------HHHHHHHHHHHHHHH
Confidence 22222 23333333333322 3455567778888999999999999999999 899999999999988
Q ss_pred Hh
Q 016399 162 IT 163 (390)
Q Consensus 162 i~ 163 (390)
..
T Consensus 312 fa 313 (330)
T KOG1583|consen 312 FA 313 (330)
T ss_pred HH
Confidence 75
No 127
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=63.18 E-value=90 Score=26.81 Aligned_cols=113 Identities=8% Similarity=0.015 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 016399 22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG 101 (390)
Q Consensus 22 ~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 101 (390)
+.++.-+-+++-|++..+.+.+.. +.-......-.+.++.......+..+.+.-...+...|+.+++ ... ..+-+.
T Consensus 101 sLl~lg~~aLlsgitaff~~nA~~--~GlItlll~a~vgGfamy~my~y~yr~~ad~sqr~~~~K~~lv-~~~-sm~lWi 176 (226)
T COG4858 101 SLLFLGAMALLSGITAFFQKNAQV--YGLITLLLTAVVGGFAMYIMYYYAYRMRADNSQRPGTWKYLLV-AVL-SMLLWI 176 (226)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCcc--hhHHHHHHHHHhhhHHHHHHHHHHHHhhcccccCCchHHHHHH-HHH-HHHHHH
Confidence 455555566677777777776443 3444443333333333333332222211111222233333333 233 234555
Q ss_pred HHHHhcccCCcccccccccchhHHHHHHHHHHhhcccccc
Q 016399 102 FYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEKVRLD 141 (390)
Q Consensus 102 ~~~~al~~~~~~~~~il~~~~pi~~~ila~l~l~e~~~~~ 141 (390)
+.+.+-..+|++... .+-|+...+++.+.+.-|.-.|
T Consensus 177 ~v~i~t~~lPtslN~---~L~pi~l~IiGav~lalRfylk 213 (226)
T COG4858 177 AVMIATVFLPTSLNP---QLPPIALTIIGAVILALRFYLK 213 (226)
T ss_pred HHHHHHhhCCCcCCc---CCchHHHHHHHHHHHHHHHHHH
Confidence 666777777776554 4455555555554444333333
No 128
>PRK02237 hypothetical protein; Provisional
Probab=61.58 E-value=54 Score=25.43 Aligned_cols=47 Identities=17% Similarity=0.101 Sum_probs=32.8
Q ss_pred Cccccccc-ccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHh
Q 016399 111 SPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (390)
Q Consensus 111 ~~~~~~il-~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 163 (390)
+.+.+..- -....+...+-.+.+-++|++. .+++|..++++|+.++.
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~------~D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDR------WDWIGAAICLVGMAVIM 104 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCCh------hHHHhHHHHHHhHHHhe
Confidence 34444333 3555566667777775555555 89999999999999886
No 129
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=61.27 E-value=35 Score=26.33 Aligned_cols=32 Identities=6% Similarity=0.041 Sum_probs=23.1
Q ss_pred HHHHHHHHHHhhccccccccCccccchhHHHHHhhhhH
Q 016399 124 AITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATV 161 (390)
Q Consensus 124 i~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l 161 (390)
.+-..++.+++||++++ ....|..+.+.++..
T Consensus 74 ~vF~~Fsv~~l~E~l~~------n~l~af~~i~~av~f 105 (108)
T PF04342_consen 74 VVFAPFSVFYLGEPLKW------NYLWAFLCILGAVYF 105 (108)
T ss_pred heeHHHHHHHhCCCccH------HHHHHHHHHHHhhhe
Confidence 34556778899999999 477777766655544
No 130
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=56.15 E-value=49 Score=27.66 Aligned_cols=53 Identities=23% Similarity=0.290 Sum_probs=34.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhh-----hCCchhHHHHHHHHHHHHHHHHH
Q 016399 198 GKNWTLGCVYLIGHCLSWSGWLVMQAPVLK-----KYPARLSVTAYTCFFGLIQFMII 250 (390)
Q Consensus 198 ~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 250 (390)
+.+......+++.+++.|++..++.....+ +.|.|+.-..+.++.++++....
T Consensus 127 ~~~f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ialitagLmSlaF 184 (193)
T COG4657 127 GHNFLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIALITAGLMSLAF 184 (193)
T ss_pred hhhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHH
Confidence 445677889999999999998887654433 34455555555555555555443
No 131
>PRK03893 putative sialic acid transporter; Provisional
Probab=53.36 E-value=2.4e+02 Score=27.91 Aligned_cols=7 Identities=14% Similarity=0.430 Sum_probs=3.2
Q ss_pred CCCchHH
Q 016399 47 GISKLVF 53 (390)
Q Consensus 47 ~~~~~~~ 53 (390)
+.++.+.
T Consensus 51 ~~s~~~~ 57 (496)
T PRK03893 51 GLTTVQA 57 (496)
T ss_pred CCCHHHH
Confidence 4555443
No 132
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=51.27 E-value=66 Score=24.22 Aligned_cols=59 Identities=12% Similarity=0.043 Sum_probs=33.1
Q ss_pred HHHHhcCCceeeeehhhhHHHHHHHHHHHH---hCCC-chhhHHHHHHHHHHHhhheeecCcc
Q 016399 288 IWCIDRGGPVFVAVYQPVQTLVVAIMASFA---LGEE-FYLGGIIGAVLIVVGLYLVLWGKSE 346 (390)
Q Consensus 288 ~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~---~~e~-~~~~~~iG~~li~~gv~l~~~~~~~ 346 (390)
..++++++...--.+-.++.+.+++++.+. .++. +-...|.|++.=+.+..+.....+|
T Consensus 22 Vq~IkkT~~v~~K~iPlIs~viGilLG~~~~~~~~~~~l~~~~~aG~laGlAaTGL~e~~t~r 84 (93)
T PF06946_consen 22 VQAIKKTKVVPNKWIPLISVVIGILLGAAAYPLTGDGNLALMAWAGGLAGLAATGLFEQFTNR 84 (93)
T ss_pred HHHHHHhccCCcchhhHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHhhhhhhhHHHHHHhh
Confidence 556666665555555566666666665442 3333 2333477776666666665544443
No 133
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=49.80 E-value=2.8e+02 Score=27.74 Aligned_cols=23 Identities=0% Similarity=0.193 Sum_probs=18.9
Q ss_pred chhhHHHHHHHHHHHhhheeecC
Q 016399 322 FYLGGIIGAVLIVVGLYLVLWGK 344 (390)
Q Consensus 322 ~~~~~~iG~~li~~gv~l~~~~~ 344 (390)
++..|++.+.++++|++++.+.+
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~ 276 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAP 276 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhh
Confidence 68889999999999988776433
No 134
>PRK10263 DNA translocase FtsK; Provisional
Probab=48.17 E-value=4.7e+02 Score=29.90 Aligned_cols=16 Identities=6% Similarity=0.098 Sum_probs=10.0
Q ss_pred cchhHHHHHhhhhHHh
Q 016399 148 KVVGTLFCVAGATVIT 163 (390)
Q Consensus 148 ~~~g~~l~~~Gv~li~ 163 (390)
+..++++.++++++++
T Consensus 24 E~~gIlLlllAlfL~l 39 (1355)
T PRK10263 24 EALLILIVLFAVWLMA 39 (1355)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4566666667766653
No 135
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=47.00 E-value=62 Score=25.06 Aligned_cols=52 Identities=13% Similarity=0.158 Sum_probs=35.8
Q ss_pred cccCCccccccc-ccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhh
Q 016399 107 LENTSPTFASAI-QNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL 164 (390)
Q Consensus 107 l~~~~~~~~~il-~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 164 (390)
++-.+.+.+..- -....+...+-.+.+-+++++. .+++|..++++|+.++..
T Consensus 51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~------~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDR------WDWIGAAICLVGVAIILF 103 (107)
T ss_pred cCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCCh------HHHHhHHHHHHhHHheEe
Confidence 444444444333 3556666777777775555555 899999999999999873
No 136
>PF15108 TMEM37: Voltage-dependent calcium channel gamma-like subunit protein family
Probab=45.64 E-value=94 Score=25.84 Aligned_cols=81 Identities=14% Similarity=0.219 Sum_probs=51.6
Q ss_pred cchhHHHHHhhhhHHhhhcCCcccCCCCCCCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016399 148 KVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLK 227 (390)
Q Consensus 148 ~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~ 227 (390)
.-.+++.++.|.=++...+--++... ...|.+|..+.+++.+..+.+...--.+++
T Consensus 91 ~slAVV~AIFGLElLmvSQvcEd~~S------------------------rrKWamGs~LlLvsfvlSs~GllsFviLL~ 146 (184)
T PF15108_consen 91 GSLAVVVAIFGLELLMVSQVCEDAHS------------------------RRKWAMGSVLLLVSFVLSSGGLLSFVILLR 146 (184)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcchh------------------------hhhhhhhhHHHHHHHHHhcccHHHHHHHHh
Confidence 44567778888777664442221110 567889999999888887776655555555
Q ss_pred hCC--chhHHHHHHHHHHHHHHHHHHH
Q 016399 228 KYP--ARLSVTAYTCFFGLIQFMIIAA 252 (390)
Q Consensus 228 ~~~--~~~~~~~~~~~~~~~~~~~~~~ 252 (390)
+.. -.++.++|.-+.+...++.-.+
T Consensus 147 ~~vtl~GFTL~fWCeFtAsFLfFLN~i 173 (184)
T PF15108_consen 147 NQVTLIGFTLMFWCEFTASFLFFLNGI 173 (184)
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHhhh
Confidence 543 3467778877777666655443
No 137
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=44.61 E-value=9.3 Score=31.21 Aligned_cols=24 Identities=13% Similarity=0.041 Sum_probs=16.8
Q ss_pred CCceeeeehhhhHHHHHHHHHHHH
Q 016399 294 GGPVFVAVYQPVQTLVVAIMASFA 317 (390)
Q Consensus 294 ~~~~~~s~~~~~~pv~~~l~~~~~ 317 (390)
-+....+.+.|+.|+++++++.++
T Consensus 72 kslL~sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 72 KSLLKSALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 344456667788888888887655
No 138
>PF15050 SCIMP: SCIMP protein
Probab=43.08 E-value=7.2 Score=30.53 Aligned_cols=10 Identities=30% Similarity=0.664 Sum_probs=4.5
Q ss_pred HHHHHHHHHH
Q 016399 327 IIGAVLIVVG 336 (390)
Q Consensus 327 ~iG~~li~~g 336 (390)
+++.++|+++
T Consensus 11 iLAVaII~vS 20 (133)
T PF15050_consen 11 ILAVAIILVS 20 (133)
T ss_pred HHHHHHHHHH
Confidence 4444444444
No 139
>PF15102 TMEM154: TMEM154 protein family
Probab=41.94 E-value=30 Score=28.39 Aligned_cols=22 Identities=18% Similarity=0.365 Sum_probs=13.1
Q ss_pred HHHHHHHHHHhhheeecCcchh
Q 016399 327 IIGAVLIVVGLYLVLWGKSEEK 348 (390)
Q Consensus 327 ~iG~~li~~gv~l~~~~~~~~~ 348 (390)
++++++++..++++.+.|||+.
T Consensus 66 VLLvlLLl~vV~lv~~~kRkr~ 87 (146)
T PF15102_consen 66 VLLVLLLLSVVCLVIYYKRKRT 87 (146)
T ss_pred HHHHHHHHHHHHheeEEeeccc
Confidence 4455566666777766655444
No 140
>PF03595 SLAC1: Voltage-dependent anion channel; InterPro: IPR004695 Two members of the Tellurite-Resistance/Dicarboxylate Transporter (TDT) family have been functionally characterised. One is the TehA protein of Escherichia coli which has been implicated in resistance to tellurite; the other is the Mae1 protein of Schizosaccharomyces pombe which functions in the uptake of malate and other dicarboxylates by a proton symport mechanism. These proteins exhibit 10 putative transmembrane a-helical spanners (TMSs).; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3M76_A 3M7C_A 3M7E_A 3M74_A 3M7B_A 3M71_A 3M72_A 3M77_A 3M7L_A 3M75_A ....
Probab=41.08 E-value=2.5e+02 Score=26.28 Aligned_cols=78 Identities=10% Similarity=0.057 Sum_probs=42.3
Q ss_pred cchhHHHHHhhhhHHhhhcCCcccCCCCCCCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHH-------HHH
Q 016399 148 KVVGTLFCVAGATVITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSG-------WLV 220 (390)
Q Consensus 148 ~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~-------~~v 220 (390)
.+.++.++..|+..+.. +-+... ......|..+..++.+.+.. -.+
T Consensus 6 ~~f~~~mGtg~l~~~~~-~~~~~~--------------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~ 58 (330)
T PF03595_consen 6 AWFGMVMGTGGLSNLLY-LLPYHF--------------------------GGLAILSEVLFILALILFLVLLVLYLLRWI 58 (330)
T ss_dssp GGGHHHHHHHHHHHHHH-TTTTTS--------------------------TTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhc--------------------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999998888862 111100 33445677666666666666 222
Q ss_pred HHHH-hhhhCCchhHHHHHHHHHHHHHHHHHHH
Q 016399 221 MQAP-VLKKYPARLSVTAYTCFFGLIQFMIIAA 252 (390)
Q Consensus 221 ~~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (390)
..++ ..++..||....++.........+....
T Consensus 59 ~~~~~~~~el~~p~~~~f~~t~~m~~~~l~~~~ 91 (330)
T PF03595_consen 59 RYPKAFKAELRHPVRSSFFPTFPMALMLLAAFI 91 (330)
T ss_dssp H-HHHHHHHHHSTTGGGGGGHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhcCCcccchHHHHHHHHHHHHHHH
Confidence 2222 2233335666666655555544444333
No 141
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=39.49 E-value=48 Score=26.87 Aligned_cols=16 Identities=38% Similarity=0.669 Sum_probs=8.6
Q ss_pred hHHHHHHHHHHHhhhe
Q 016399 325 GGIIGAVLIVVGLYLV 340 (390)
Q Consensus 325 ~~~iG~~li~~gv~l~ 340 (390)
..++|..+++.|++..
T Consensus 88 ~~i~g~~~~~~G~~~i 103 (136)
T PF08507_consen 88 SIIIGLLLFLVGVIYI 103 (136)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3455666666665433
No 142
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=39.15 E-value=28 Score=22.05 Aligned_cols=17 Identities=24% Similarity=0.315 Sum_probs=8.4
Q ss_pred chhhHHHHHHHHHHHhh
Q 016399 322 FYLGGIIGAVLIVVGLY 338 (390)
Q Consensus 322 ~~~~~~iG~~li~~gv~ 338 (390)
|+|..++=.++|++|++
T Consensus 2 p~wlt~iFsvvIil~If 18 (49)
T PF11044_consen 2 PTWLTTIFSVVIILGIF 18 (49)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 34444554455555543
No 143
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=38.70 E-value=3.9e+02 Score=26.54 Aligned_cols=15 Identities=20% Similarity=0.538 Sum_probs=6.8
Q ss_pred HHHHHHHHHHhhhee
Q 016399 327 IIGAVLIVVGLYLVL 341 (390)
Q Consensus 327 ~iG~~li~~gv~l~~ 341 (390)
+.|+.+++.+++.+.
T Consensus 417 ~~~~~~~i~~~~~~~ 431 (476)
T PLN00028 417 LMGVMIIACTLPVAF 431 (476)
T ss_pred HHHHHHHHHHHHHHh
Confidence 335455554444433
No 144
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=38.41 E-value=4e+02 Score=26.23 Aligned_cols=8 Identities=13% Similarity=0.011 Sum_probs=4.2
Q ss_pred CCcccccc
Q 016399 1 MADTAGSV 8 (390)
Q Consensus 1 ~~~~~~~~ 8 (390)
||+.++.+
T Consensus 1 ~~~~~~~~ 8 (455)
T TIGR00892 1 MPPALPPE 8 (455)
T ss_pred CCCCCCCC
Confidence 55555444
No 145
>PF09945 DUF2177: Predicted membrane protein (DUF2177); InterPro: IPR018687 This family of putative membrane proteins has no known function.
Probab=35.31 E-value=2.4e+02 Score=22.75 Aligned_cols=45 Identities=18% Similarity=0.211 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHH
Q 016399 205 CVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIA 251 (390)
Q Consensus 205 ~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (390)
.--++++.++|+.|...+....|+.+ ..++..-...|.+.....+
T Consensus 78 ~~GallGl~~YgtYdlTN~Atlk~W~--~~~~liD~~WG~~lt~~sa 122 (128)
T PF09945_consen 78 LYGALLGLFAYGTYDLTNLATLKDWP--LKVTLIDIAWGTFLTALSA 122 (128)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHCCCC--ccHHHHHHhHHHHHHHHHH
Confidence 44578889999999999999888885 5566666666666655443
No 146
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=34.80 E-value=4.7e+02 Score=25.95 Aligned_cols=116 Identities=7% Similarity=0.051 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHHHHHHH
Q 016399 203 LGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGI 282 (390)
Q Consensus 203 ~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~ 282 (390)
.|+++..+.-+++-+.-++.|+ +.| |++....-+..+...++.+++ . ++-.+ .+..++..+. +..
T Consensus 300 YgiLFI~LTF~~fflfE~~~~~---~iH-piQY~LVGlAl~lFYlLLLSl-S--Ehi~F------~~AYliAa~a--~i~ 364 (430)
T PF06123_consen 300 YGILFIGLTFLAFFLFELLSKL---RIH-PIQYLLVGLALVLFYLLLLSL-S--EHIGF------NLAYLIAALA--CIG 364 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC---ccc-HHHHHHHHHHHHHHHHHHHHH-H--hhhch------HHHHHHHHHH--HHH
Confidence 5888877777777776665333 444 766554444333333333333 2 21111 1333333332 333
Q ss_pred HHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHH
Q 016399 283 AFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVG 336 (390)
Q Consensus 283 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~g 336 (390)
-..+|..++-+-.--...+...+..+.+.++..+-. |.. .-.+|.++.++.
T Consensus 365 Li~~Y~~~vl~~~k~~~~~~~~L~~LY~~Ly~lLq~-Edy--ALL~GSl~LF~i 415 (430)
T PF06123_consen 365 LISLYLSSVLKSWKRGLIFAGLLAALYGFLYVLLQS-EDY--ALLMGSLLLFII 415 (430)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHh-hhH--HHHHHHHHHHHH
Confidence 334444444444444445566667777777775433 333 334444443333
No 147
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=32.95 E-value=5.4e+02 Score=26.17 Aligned_cols=37 Identities=8% Similarity=-0.068 Sum_probs=16.5
Q ss_pred hhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhh
Q 016399 303 QPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYL 339 (390)
Q Consensus 303 ~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l 339 (390)
....|+-+.++|.+.-.-.......+++++++++..+
T Consensus 353 ~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 353 FGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALI 389 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 3445666666665433223333333343333444333
No 148
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=32.79 E-value=1.9e+02 Score=22.38 Aligned_cols=39 Identities=18% Similarity=0.270 Sum_probs=27.1
Q ss_pred cchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhh
Q 016399 120 NSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL 164 (390)
Q Consensus 120 ~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 164 (390)
....+...+-.++.- +++|.+.+++|..++++|+.++..
T Consensus 66 GvyI~~sL~W~~~Vd------g~~pdr~D~~Ga~icl~G~~vil~ 104 (109)
T COG1742 66 GVYIAASLAWLWVVD------GVRPDRYDWIGAAICLAGVAVILF 104 (109)
T ss_pred chHHHHHHHHHHHHc------CcCCcHHHhhhHHHHHhceeeeEe
Confidence 445555555555663 455555899999999999888763
No 149
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=32.73 E-value=5.9e+02 Score=26.51 Aligned_cols=27 Identities=15% Similarity=0.240 Sum_probs=20.7
Q ss_pred ccccccCccccchhHHHHHhhhhHHhh
Q 016399 138 VRLDRKDGIAKVVGTLFCVAGATVITL 164 (390)
Q Consensus 138 ~~~~~~~~~~~~~g~~l~~~Gv~li~~ 164 (390)
.+.|+...+.+++|+++.+.|+.++..
T Consensus 230 ~s~~~~l~~lD~IG~~L~~~Gl~LfLl 256 (599)
T PF06609_consen 230 LSKREQLKELDWIGIFLFIAGLALFLL 256 (599)
T ss_pred CcHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 334455566899999999999888764
No 150
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=32.44 E-value=3.8e+02 Score=24.24 Aligned_cols=31 Identities=19% Similarity=0.106 Sum_probs=25.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhhCC
Q 016399 200 NWTLGCVYLIGHCLSWSGWLVMQAPVLKKYP 230 (390)
Q Consensus 200 ~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~ 230 (390)
...+|.+++.+....++.=....|+..|+.+
T Consensus 125 ~~~lG~vc~~~nI~~~~sPL~~m~~VIktkS 155 (243)
T KOG1623|consen 125 VSVLGIVCAVFNISMFAAPLSVIRKVIKTKS 155 (243)
T ss_pred eeeeehhhhhhhHHhhhccHHhhhhheecCc
Confidence 4468999999999999988888888777643
No 151
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=31.89 E-value=5.2e+02 Score=26.63 Aligned_cols=25 Identities=20% Similarity=0.137 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC
Q 016399 271 SILYAGVVASGIAFAVQIWCIDRGG 295 (390)
Q Consensus 271 ~l~~~gi~~~~~~~~~~~~a~~~~~ 295 (390)
.-++.|...+.-+...-.-+++..+
T Consensus 120 ~Gl~aGalT~tp~l~aA~~a~~~~~ 144 (562)
T TIGR03802 120 AGLAAGGLTQSAVIGTAGDAIEKLG 144 (562)
T ss_pred HHHHhchhhccHHHHHHHHHHHhcC
Confidence 3344444433333333333444443
No 152
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=31.81 E-value=4.4e+02 Score=26.07 Aligned_cols=24 Identities=13% Similarity=0.152 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhCC
Q 016399 207 YLIGHCLSWSGWLVMQAPVLKKYP 230 (390)
Q Consensus 207 ~~l~s~~~~a~~~v~~k~~~~~~~ 230 (390)
+.+.+.+...+..+..-+..++.+
T Consensus 50 ~~~~~~v~~l~~~~~~~~~~~~i~ 73 (437)
T TIGR00939 50 YTLASQLPSLLFNSLNLFLIFRIP 73 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccC
Confidence 334444444444444444444443
No 153
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=31.40 E-value=23 Score=28.15 Aligned_cols=16 Identities=44% Similarity=0.750 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHH
Q 016399 271 SILYAGVVASGIAFAV 286 (390)
Q Consensus 271 ~l~~~gi~~~~~~~~~ 286 (390)
.+++.|++.+.++|.+
T Consensus 58 vili~GvvvT~vays~ 73 (129)
T PF15099_consen 58 VILIAGVVVTAVAYSF 73 (129)
T ss_pred HHHHHhhHhheeeEee
Confidence 4455566656666644
No 154
>PF15345 TMEM51: Transmembrane protein 51
Probab=30.99 E-value=30 Score=30.71 Aligned_cols=22 Identities=18% Similarity=0.371 Sum_probs=14.7
Q ss_pred HHHHHHHHHHhhheeecCcchh
Q 016399 327 IIGAVLIVVGLYLVLWGKSEEK 348 (390)
Q Consensus 327 ~iG~~li~~gv~l~~~~~~~~~ 348 (390)
..|+++.++++++-.+.|+|+.
T Consensus 66 G~Gv~LLLLSICL~IR~KRr~r 87 (233)
T PF15345_consen 66 GSGVALLLLSICLSIRDKRRRR 87 (233)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh
Confidence 3477777888887776555444
No 155
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=30.38 E-value=5.1e+02 Score=25.06 Aligned_cols=91 Identities=9% Similarity=0.007 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHH--HHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhcccccchhccCCchHHHHHHHHHHH
Q 016399 202 TLGCVYLIGHCLSWSGWLVMQ--APVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVA 279 (390)
Q Consensus 202 ~~G~l~~l~s~~~~a~~~v~~--k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~ 279 (390)
.......++..+.++...+.- +.+..+.++|+-..........+=...+....-....... -.++-..-..+.+++
T Consensus 39 ~~~~~~~~~~~i~~~~~~~v~hAe~lA~~~GeP~GtliLtlsv~~iEv~li~~~Ml~g~~~~t--laRDtvfa~vMi~~n 116 (366)
T PRK10599 39 VIAINLLALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPT--LMRDTLYSIIMIVTG 116 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHHHHcCCCCCch--HHHHHHHHHHHHHhc
Confidence 333344444555555555432 2233445566654444444444332222222211111111 122233334444556
Q ss_pred HHHHHHHHHHHHhcC
Q 016399 280 SGIAFAVQIWCIDRG 294 (390)
Q Consensus 280 ~~~~~~~~~~a~~~~ 294 (390)
+.++..++.-++|+.
T Consensus 117 GilGl~ll~GGlr~~ 131 (366)
T PRK10599 117 GLVGFSLLLGGRKFA 131 (366)
T ss_pred cHHHHHHHHhccccC
Confidence 677777777777764
No 156
>PF01350 Flavi_NS4A: Flavivirus non-structural protein NS4A; InterPro: IPR000404 Flaviviruses encode a single polyprotein. This is cleaved into three structural and seven non-structural proteins. The NS4A protein is small and poorly conserved among the Flaviviruses. NS4A contains multiple hydrophobic potential membrane spanning regions []. NS4A has only been found in cells infected by Kunjin virus [].; GO: 0016032 viral reproduction, 0016070 RNA metabolic process, 0044423 virion part
Probab=29.28 E-value=3.3e+02 Score=22.46 Aligned_cols=71 Identities=20% Similarity=0.191 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHhhheeecCcc
Q 016399 271 SILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKSE 346 (390)
Q Consensus 271 ~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~~~~~~ 346 (390)
.++..++. .......+.+-+++.+..+.++-...- ...+++.+--..++.++.|..++..=+.++...+..
T Consensus 50 till~~ll-~~~T~G~~~~lm~~kgi~rm~lG~~vm----~~~~~llw~ggv~~~~IAg~~lv~filmvVLiPEpg 120 (144)
T PF01350_consen 50 TILLVVLL-GVMTLGVFWFLMRRKGIGRMSLGMLVM----AVAGYLLWMGGVPPGQIAGVLLVFFILMVVLIPEPG 120 (144)
T ss_pred HHHHHHHH-HHHHHHHHHhhhcCCCcchhhHHHHHH----HHHHHHHHhcCCcHHHhHHHHHHHHHHHHhcccCCC
Confidence 33333333 334444445566777777766544332 233334444567888899999888777666654443
No 157
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=29.19 E-value=1.8e+02 Score=23.96 Aligned_cols=29 Identities=7% Similarity=0.033 Sum_probs=23.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016399 199 KNWTLGCVYLIGHCLSWSGWLVMQAPVLK 227 (390)
Q Consensus 199 ~~~~~G~l~~l~s~~~~a~~~v~~k~~~~ 227 (390)
.+.....+..+++++.|.-|...+||..+
T Consensus 117 ~~~i~~l~~~li~a~IwipYf~~S~RVK~ 145 (149)
T PF10754_consen 117 AEAIRELLRSLIAAAIWIPYFLRSKRVKN 145 (149)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHhhh
Confidence 34457888999999999999999888643
No 158
>KOG1289 consensus Amino acid transporters [Amino acid transport and metabolism]
Probab=28.53 E-value=1.9e+02 Score=29.49 Aligned_cols=49 Identities=4% Similarity=-0.017 Sum_probs=26.3
Q ss_pred CCceeeeehhhhHHHHHHHHHHHHh--------------CCCchhhHHHHHHHHHHHhhheee
Q 016399 294 GGPVFVAVYQPVQTLVVAIMASFAL--------------GEEFYLGGIIGAVLIVVGLYLVLW 342 (390)
Q Consensus 294 ~~~~~~s~~~~~~pv~~~l~~~~~~--------------~e~~~~~~~iG~~li~~gv~l~~~ 342 (390)
..+....+--...|+-.+.+.|.+| ++.+++...+.+..++.+++.+..
T Consensus 446 f~~gp~~lGk~s~p~~~i~v~w~lf~~vil~fP~~~pvT~~~MNya~VV~gg~~lf~li~~~~ 508 (550)
T KOG1289|consen 446 FRPGPFNLGKFSKPIGIIAVLWVLFMIVILCFPSVYPVTADNMNYACVVYGGVMLFCLIYYFV 508 (550)
T ss_pred cCCCCccccccccchHHHHHHHHHHHHHHHhCCcccCCCcccCceEEEeehhhhhhhhheeee
Confidence 5566665555555555555544433 455666655555555555544443
No 159
>TIGR00893 2A0114 d-galactonate transporter.
Probab=28.15 E-value=4.8e+02 Score=24.07 Aligned_cols=10 Identities=10% Similarity=0.212 Sum_probs=3.9
Q ss_pred HHHHHhhhhC
Q 016399 220 VMQAPVLKKY 229 (390)
Q Consensus 220 v~~k~~~~~~ 229 (390)
....+..++.
T Consensus 47 ~~~g~l~d~~ 56 (399)
T TIGR00893 47 FPGGWLLDRF 56 (399)
T ss_pred HhHHHHHHhc
Confidence 3333334443
No 160
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=28.11 E-value=5.5e+02 Score=25.17 Aligned_cols=258 Identities=9% Similarity=-0.059 Sum_probs=0.0
Q ss_pred cccchhhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhccc--CCCCCH
Q 016399 5 AGSVSTRRMCSVPEKLQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKE--RPAMTL 82 (390)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~--~~~~~~ 82 (390)
++|...+...-+.--+...++...+-..|+-..-+.+.... ++.--..+..-...+.+....+.-.|+.+. ..+.+.
T Consensus 115 aeR~~~~~~~v~~~~~~~~vY~~~ahwvW~~~GwL~~lG~~-DfAG~~vVH~~gG~~~L~~a~~LGpR~~r~~~~~~~~~ 193 (403)
T TIGR00836 115 AERMKFSAYLLFSVLWTTLVYPPVAHWVWGGGGWLYKLGVL-DFAGGGVVHIVGGVAGLAAALVLGPRIGRFPRPVAIRP 193 (403)
T ss_pred hhcccHHHHHHHHHHHHHHHHHhccceeecCCchhhccCcc-hhcCceeEecchhHHHHHHHHHhcCCCCCCcCcCCCCC
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCcccc--cccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhh
Q 016399 83 NFALQFILLALVGITANQGFYLLGLENTSPTFA--SAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGAT 160 (390)
Q Consensus 83 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~--~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~ 160 (390)
+......+-.++ .-..+..|+-+........+ ++++.+.-.-...+++++.....+.| .....+.-+.++-.
T Consensus 194 ~n~~~~~lGt~l-Lw~gW~gFN~Gs~~~~~~~~~~a~~nT~lA~a~g~l~~~~~~~~~~gk-----~~~~~~~nG~LAGL 267 (403)
T TIGR00836 194 HNVPLVVLGTFI-LWFGWFGFNAGSALAANGTAAYAAVNTNLAAAAGGLTWLLIDWLKHGK-----PTLLGACNGILAGL 267 (403)
T ss_pred CCHHHHHHHHHH-HHHHHhcccchhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CCHHHHHhhhhhhh
Q ss_pred HHhhhcCCcccCCCCCCCCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHH
Q 016399 161 VITLYKGPTIYSPAPPLNQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTC 240 (390)
Q Consensus 161 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~ 240 (390)
+.+ ..+... -..+.-=++-.+.+.+++-.+..+.++. +.+|+........
T Consensus 268 Vai-ta~a~~---------------------------v~p~~A~viG~iag~~~~~~~~~l~~~~--~iDD~~~~~~vHg 317 (403)
T TIGR00836 268 VAI-TPGCGV---------------------------VTPWGAIIIGLVAGVLCYLAVSKLKKKL--KIDDPLDAFAVHG 317 (403)
T ss_pred eee-cCCCCC---------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCCCcccchhhh
Q ss_pred HHHHHHHHHHHHHhcccccchh---------ccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCceeee
Q 016399 241 FFGLIQFMIIAAIFERNLDAWI---------FHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVA 300 (390)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s 300 (390)
..+..-.+...++......... ..-..++..++..... ++..-....+.+++....+++
T Consensus 318 ~~Gi~G~i~~glfa~~~~~~~~~g~~~~~~~~~l~~Ql~g~~~~~~~-s~~~~~ii~~il~~~~~lRv~ 385 (403)
T TIGR00836 318 VGGIWGLIATGLFAAPKVGGVGTGGLLGGNGKQLGVQLIGIAAIIAW-AFVVTFIILKILDKTIGLRVS 385 (403)
T ss_pred hhHHHHHHHHHHhcccccccccCCccccCcHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcccccCC
No 161
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=27.88 E-value=4e+02 Score=23.04 Aligned_cols=9 Identities=11% Similarity=-0.311 Sum_probs=3.6
Q ss_pred HHHHHHHHH
Q 016399 213 LSWSGWLVM 221 (390)
Q Consensus 213 ~~~a~~~v~ 221 (390)
+..++...+
T Consensus 110 Llsgitaff 118 (226)
T COG4858 110 LLSGITAFF 118 (226)
T ss_pred HHHHHHHHH
Confidence 333444443
No 162
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=27.40 E-value=4.1e+02 Score=26.35 Aligned_cols=46 Identities=22% Similarity=0.220 Sum_probs=29.4
Q ss_pred hhhHHHHHHHHHHHHhCCC-chhhHHHHHHHHHHHhhheeecCcchhh
Q 016399 303 QPVQTLVVAIMASFALGEE-FYLGGIIGAVLIVVGLYLVLWGKSEEKK 349 (390)
Q Consensus 303 ~~~~pv~~~l~~~~~~~e~-~~~~~~iG~~li~~gv~l~~~~~~~~~~ 349 (390)
+.+-|+++.+ +++.++-. -.....-|++.+++|++++...+.++++
T Consensus 166 Gal~~~~~~l-a~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs 212 (448)
T COG2271 166 GALAPLVALL-AFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQS 212 (448)
T ss_pred cchHHHHHHH-HHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 4455555554 55555433 2333556888899999988877776655
No 163
>COG4665 FcbT2 TRAP-type mannitol/chloroaromatic compound transport system, small permease component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=26.36 E-value=4e+02 Score=22.59 Aligned_cols=54 Identities=24% Similarity=0.215 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcc
Q 016399 21 QLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKK 75 (390)
Q Consensus 21 ~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~ 75 (390)
+...++++.+++-+..+++.|++.+. .+-..+=.=.++++.++++.-.+-.+..
T Consensus 20 k~~swLvl~~vl~~~~nvv~Ry~~N~-sSna~lEaqWyLF~~vFllaaaYtL~~n 73 (182)
T COG4665 20 KAASWLVLVAVLVSAGNVVMRYAFNM-SSNAWLEAQWYLFGAVFLLAAAYTLKQN 73 (182)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45677888889999999999999884 5555555666778888887766655443
No 164
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=25.54 E-value=58 Score=20.36 Aligned_cols=18 Identities=33% Similarity=1.003 Sum_probs=11.0
Q ss_pred HHHHHHHHHhhheeecCc
Q 016399 328 IGAVLIVVGLYLVLWGKS 345 (390)
Q Consensus 328 iG~~li~~gv~l~~~~~~ 345 (390)
+|.++++++.+++.+.++
T Consensus 21 V~vI~~vl~~~l~~~~rR 38 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYRR 38 (40)
T ss_pred hHHHHHHHHHHhheEEec
Confidence 456666677777655444
No 165
>PF07214 DUF1418: Protein of unknown function (DUF1418); InterPro: IPR010815 This family consists of several hypothetical Enterobacterial proteins of around 100 residues in length. Members of this family are often described as YbjC. In Escherichia coli the ybjC gene is located downstream of nfsA (which encodes the major oxygen-insensitive nitroreductase). It is thought that nfsA and ybjC form an operon an its promoter is a class I SoxS-dependent promoter []. The function of this family is unknown.
Probab=25.40 E-value=38 Score=25.65 Aligned_cols=21 Identities=14% Similarity=0.358 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHhhheeecCcc
Q 016399 326 GIIGAVLIVVGLYLVLWGKSE 346 (390)
Q Consensus 326 ~~iG~~li~~gv~l~~~~~~~ 346 (390)
-++|+++++=+.+.+.|+..+
T Consensus 49 If~Gi~lMlPAav~ivWR~a~ 69 (96)
T PF07214_consen 49 IFVGIGLMLPAAVNIVWRVAK 69 (96)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 345666666555555554433
No 166
>COG4237 HyfE Hydrogenase 4 membrane component (E) [Energy production and conversion]
Probab=25.37 E-value=4.5e+02 Score=22.84 Aligned_cols=40 Identities=13% Similarity=0.164 Sum_probs=32.1
Q ss_pred HHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhh
Q 016399 125 ITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITL 164 (390)
Q Consensus 125 ~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 164 (390)
...++.+-..|||.+.||+--....+..+++..++.++..
T Consensus 73 vp~~L~ra~~ke~~~~rE~~~lln~a~slla~~iv~l~af 112 (218)
T COG4237 73 VPLFLTRAARKEKQNIREKALLLNLAFSLLAALIVYLCAF 112 (218)
T ss_pred HHHHHHHHhhcccccchhhhhhHHHHHHHHHHHHHHHHHh
Confidence 4556777788999999998877788888888888888764
No 167
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=25.19 E-value=5.4e+02 Score=23.64 Aligned_cols=102 Identities=10% Similarity=-0.003 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHh-cCCCchHHHHHHHHHHHHHHHHHHhhhh--cccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016399 31 FGYAGFHVVSRAALN-MGISKLVFPVYRNIIAFLLLLPFAYFLE--KKERPAMTLNFALQFILLALVGITANQGFYLLGL 107 (390)
Q Consensus 31 ~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al 107 (390)
.+|+..+.+....-. .++.|...+.+-.+....+...+...+| |+.+...-..+.+.++..+.+.. .-...|..|.
T Consensus 104 ~lyAlinAl~~l~dGGR~v~~~~ai~yt~~s~~~Ca~~~~~~~r~nrr~~s~lIald~kqW~Mst~lS~-al~VaF~~a~ 182 (314)
T COG3965 104 CLYALINALGSLLDGGREVEPGHAIAYTLVSVTGCAAIAWKLRRLNRRLKSPLIALDTKQWLMSTCLSA-ALFVAFAAAW 182 (314)
T ss_pred HHHHHHHHHHHHhcCCccccccHHHHHHHHHHHHHHHHHHHHHhhhccCCCchhhhHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 455666555544322 2466776666665555555444444333 22222233334444445554432 2333444555
Q ss_pred ccCCcccccccccchhHHHHHHHHHH
Q 016399 108 ENTSPTFASAIQNSVPAITFLMAAIF 133 (390)
Q Consensus 108 ~~~~~~~~~il~~~~pi~~~ila~l~ 133 (390)
.......+-...+.-|.+.++.+.+|
T Consensus 183 ~l~~T~~a~l~~Y~DPmvlaL~~~v~ 208 (314)
T COG3965 183 LLAGTKFAHLVVYADPMVLALVCLVF 208 (314)
T ss_pred HhccCchhhhhcccCHHHHHHHHHhe
Confidence 55566667777889999999999888
No 168
>PRK11010 ampG muropeptide transporter; Validated
Probab=25.18 E-value=6.9e+02 Score=24.90 Aligned_cols=21 Identities=24% Similarity=0.189 Sum_probs=11.4
Q ss_pred chhhHHHHHHHHHHHhhheee
Q 016399 322 FYLGGIIGAVLIVVGLYLVLW 342 (390)
Q Consensus 322 ~~~~~~iG~~li~~gv~l~~~ 342 (390)
......+..++.+.|+++...
T Consensus 381 ~~~~f~~~~~~~l~~l~~~~~ 401 (491)
T PRK11010 381 WPTFYLFSVAAAVPGLLLLLV 401 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 333455566666666655543
No 169
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=25.16 E-value=6.6e+02 Score=24.65 Aligned_cols=9 Identities=0% Similarity=-0.330 Sum_probs=4.1
Q ss_pred HHhcCCcee
Q 016399 290 CIDRGGPVF 298 (390)
Q Consensus 290 a~~~~~~~~ 298 (390)
.....++..
T Consensus 374 ~~~~~p~~~ 382 (467)
T PRK09556 374 AVGFVPKKA 382 (467)
T ss_pred HHhhcchhh
Confidence 344455433
No 170
>COG0004 AmtB Ammonia permease [Inorganic ion transport and metabolism]
Probab=25.08 E-value=6.6e+02 Score=24.65 Aligned_cols=240 Identities=9% Similarity=-0.043 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHH
Q 016399 20 LQLHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITAN 99 (390)
Q Consensus 20 ~~~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 99 (390)
+..++|...+-..|+...-+.+.... ++.--..+-....++.+....+...|...+..+.++++.....+-..+ .-..
T Consensus 133 w~~~vY~p~ahWvWggggwl~~~g~~-DFAGgtVVHi~aG~aaLa~a~~lG~R~g~~~~~~~pHNl~~~~lGa~l-LWfG 210 (409)
T COG0004 133 WSTLVYPPVAHWVWGGGGWLALLGAL-DFAGGTVVHINAGFAALAAALVLGKRIGGKPVAIPPHNLPLVVLGAAL-LWFG 210 (409)
T ss_pred HHHHHhhhhheeEecCchHHHhcCce-ecCCCceEEechhHHHHHHHHHeecccCCCCCCCCCCchhHHHHHHHH-HHHH
Q ss_pred HHHHHHhcccCCccc--ccccccchhHHHHHHHHHHhhccccccccCccccchhHHHHHhhhhHHhhhcCCcccCCCCCC
Q 016399 100 QGFYLLGLENTSPTF--ASAIQNSVPAITFLMAAIFRIEKVRLDRKDGIAKVVGTLFCVAGATVITLYKGPTIYSPAPPL 177 (390)
Q Consensus 100 ~~~~~~al~~~~~~~--~~il~~~~pi~~~ila~l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~ 177 (390)
+..|+-+-....-.. .+.+....---...+++.+..-..+.| ...++..-..+.-.+.+ +.....
T Consensus 211 WfGFN~GSal~~~~~a~~a~~nT~lAaa~g~l~w~~~e~~~~~K-----p~~lg~~sG~vAGLVaI-Tpaag~------- 277 (409)
T COG0004 211 WFGFNAGSALAANGVAALAFVNTNLAAAAGALGWMLIEWLRNGK-----PSLLGAASGAVAGLVAI-TPAAGF------- 277 (409)
T ss_pred HccCCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-----CchhhhhhHHHhHHHhc-CCcccc-------
Q ss_pred CCCCCCCcccccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhCCchhHHHHHHHHHHHHHHHHHHHHhccc
Q 016399 178 NQIQPDSLTSTIFLSLGDAKGKNWTLGCVYLIGHCLSWSGWLVMQAPVLKKYPARLSVTAYTCFFGLIQFMIIAAIFERN 257 (390)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (390)
-+.+.-=++-.+.+.+|+-....+.|+. +++|++-.....-..+..-.+...++..+.
T Consensus 278 --------------------V~p~~A~iiGii~g~i~~~a~~~lk~~l--~~DD~ld~f~vHGvgGi~G~i~~GiFa~~~ 335 (409)
T COG0004 278 --------------------VSPWGALIIGLIAGVICYFAVKLLKKKL--GVDDALDVFGVHGVGGIVGAILTGIFAAPA 335 (409)
T ss_pred --------------------cCcHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcccceeccchhhHHHHHHHHHhcCcc
Q ss_pred ccchhccCCc----------hHHHHHHHHHHHHHHHHHHHHHHHhcCCceeee
Q 016399 258 LDAWIFHNGG----------EVFSILYAGVVASGIAFAVQIWCIDRGGPVFVA 300 (390)
Q Consensus 258 ~~~~~~~~~~----------~~~~l~~~gi~~~~~~~~~~~~a~~~~~~~~~s 300 (390)
. ...... +....+...+.+.+.++.. .+.++.....|++
T Consensus 336 ~---~~~~G~~~~~~~~l~~Q~~~v~~~~~~~~v~t~ii-~~vl~~~~gLRvs 384 (409)
T COG0004 336 V---GGGGGLFYGGGVQLGVQLLGVLVTIVYAFVVTFII-LKVLKLIIGLRVS 384 (409)
T ss_pred c---cccCccccccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccCCCCC
No 171
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=24.89 E-value=1.1e+02 Score=17.76 Aligned_cols=19 Identities=26% Similarity=0.287 Sum_probs=10.3
Q ss_pred chhhHHHHHHHHHHHhhhe
Q 016399 322 FYLGGIIGAVLIVVGLYLV 340 (390)
Q Consensus 322 ~~~~~~iG~~li~~gv~l~ 340 (390)
-.+..++|..++..+.++.
T Consensus 10 ~~~~~~~G~~l~~~~~~~~ 28 (34)
T TIGR01167 10 NSLLLLLGLLLLGLGGLLL 28 (34)
T ss_pred cHHHHHHHHHHHHHHHHHh
Confidence 4456677775555544333
No 172
>PRK12489 anaerobic C4-dicarboxylate transporter; Reviewed
Probab=24.79 E-value=7e+02 Score=24.83 Aligned_cols=13 Identities=15% Similarity=0.335 Sum_probs=7.4
Q ss_pred HHHHHHHHHhhcc
Q 016399 125 ITFLMAAIFRIEK 137 (390)
Q Consensus 125 ~~~ila~l~l~e~ 137 (390)
+..+++.++++-|
T Consensus 6 ~~~~l~~i~~g~r 18 (443)
T PRK12489 6 FLILLICLFLGAR 18 (443)
T ss_pred HHHHHHHHHHhhh
Confidence 3456666775543
No 173
>PRK14789 lipoprotein signal peptidase; Provisional
Probab=24.77 E-value=2.1e+02 Score=24.85 Aligned_cols=11 Identities=18% Similarity=0.407 Sum_probs=5.0
Q ss_pred HHHHHHHHHHh
Q 016399 327 IIGAVLIVVGL 337 (390)
Q Consensus 327 ~iG~~li~~gv 337 (390)
.+|+++++...
T Consensus 136 ~iGvilLl~~~ 146 (191)
T PRK14789 136 TIGVAALAFHI 146 (191)
T ss_pred HHHHHHHHHHH
Confidence 34554444443
No 174
>MTH00057 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=24.53 E-value=4.6e+02 Score=22.56 Aligned_cols=31 Identities=16% Similarity=0.374 Sum_probs=19.0
Q ss_pred HHHHHHHhCCCchhhHHHHHHHHH--HHhhhee
Q 016399 311 AIMASFALGEEFYLGGIIGAVLIV--VGLYLVL 341 (390)
Q Consensus 311 ~l~~~~~~~e~~~~~~~iG~~li~--~gv~l~~ 341 (390)
-.+|..++.|-.-+-+..|..+.+ +|.+...
T Consensus 132 ~~iG~~Lyt~Y~l~fe~~s~lLLvAmIGAIvLa 164 (186)
T MTH00057 132 EVLGRVLYTDYYYLFILASFILLVAMIGAIVLT 164 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344666777777777777777655 3444444
No 175
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=24.43 E-value=35 Score=27.23 Aligned_cols=6 Identities=33% Similarity=0.695 Sum_probs=2.2
Q ss_pred HHHHHH
Q 016399 329 GAVLIV 334 (390)
Q Consensus 329 G~~li~ 334 (390)
|+++++
T Consensus 76 GvIg~I 81 (122)
T PF01102_consen 76 GVIGII 81 (122)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 176
>COG1968 BacA Undecaprenyl pyrophosphate phosphatase [Lipid transport and metabolism]
Probab=24.07 E-value=5.7e+02 Score=23.53 Aligned_cols=89 Identities=10% Similarity=0.065 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 016399 22 LHLAMVALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFILLALVGITANQG 101 (390)
Q Consensus 22 ~~l~~ll~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 101 (390)
-.+..+++++--+......+...+..+-....+.+-..+..++++..-...++.+.+..+.-.++..+..|+.+ +++
T Consensus 86 l~l~ilvatiPa~v~Gl~~~d~i~~~l~~~~~va~~lIv~gi~li~~e~~~~~~~~~~~~~l~~~da~~IGlaQ-~lA-- 162 (270)
T COG1968 86 LWLKILVATIPAVVLGLLFKDFIKSHLFNPRVVAIALIVGGILLILAEKLNKKPRLRDLDDLTLRDALIIGLAQ-CLA-- 162 (270)
T ss_pred HHHHHHHHHHhHHHhhHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHhccccCcCChhhCCHHHHHHHHHHH-HHH--
Confidence 45666677776677777776655532333444444555555554444333322122333444455567777663 322
Q ss_pred HHHHhcccCCccc
Q 016399 102 FYLLGLENTSPTF 114 (390)
Q Consensus 102 ~~~~al~~~~~~~ 114 (390)
..=+..+.+++.
T Consensus 163 -l~PG~SRSGaTI 174 (270)
T COG1968 163 -LIPGTSRSGATI 174 (270)
T ss_pred -HcCCCCccHHHH
Confidence 234555554443
No 177
>COG2245 Predicted membrane protein [Function unknown]
Probab=23.90 E-value=4.5e+02 Score=22.33 Aligned_cols=22 Identities=18% Similarity=-0.075 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhCC
Q 016399 209 IGHCLSWSGWLVMQAPVLKKYP 230 (390)
Q Consensus 209 l~s~~~~a~~~v~~k~~~~~~~ 230 (390)
++|-..+.+-.+-.+...+..+
T Consensus 29 ilSlVG~VLvlval~~iS~~~g 50 (182)
T COG2245 29 ILSLVGLVLVLVALYMISKQVG 50 (182)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 5677777776666666666655
No 178
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=23.80 E-value=6.7e+02 Score=24.23 Aligned_cols=22 Identities=23% Similarity=0.490 Sum_probs=15.1
Q ss_pred CCchhhHHHHHHHHHHHhhhee
Q 016399 320 EEFYLGGIIGAVLIVVGLYLVL 341 (390)
Q Consensus 320 e~~~~~~~iG~~li~~gv~l~~ 341 (390)
...+..+-.++..+.+++|...
T Consensus 161 ~~~~~~~s~~~avv~i~~Y~lf 182 (368)
T COG0387 161 GNFSLGQSLFVAVVLIALYGLF 182 (368)
T ss_pred CcchHhHHHHHHHHHHHHHHHH
Confidence 3455677778888887777654
No 179
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=23.09 E-value=41 Score=26.72 Aligned_cols=27 Identities=19% Similarity=0.194 Sum_probs=14.1
Q ss_pred HHHhCCCchhhH----HHHHHHHHHHhhhee
Q 016399 315 SFALGEEFYLGG----IIGAVLIVVGLYLVL 341 (390)
Q Consensus 315 ~~~~~e~~~~~~----~iG~~li~~gv~l~~ 341 (390)
|+|--|..+++. .+.++++++|++++-
T Consensus 25 W~fR~ED~tpWNysiL~Ls~vvlvi~~~LLg 55 (125)
T PF15048_consen 25 WFFRVEDATPWNYSILALSFVVLVISFFLLG 55 (125)
T ss_pred HheecCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 344556666543 234455556666554
No 180
>PF14851 FAM176: FAM176 family
Probab=21.99 E-value=2.6e+02 Score=23.32 Aligned_cols=10 Identities=30% Similarity=0.355 Sum_probs=3.9
Q ss_pred Cceeeeehhh
Q 016399 295 GPVFVAVYQP 304 (390)
Q Consensus 295 ~~~~~s~~~~ 304 (390)
.|..++++..
T Consensus 18 ~PE~~aLYFv 27 (153)
T PF14851_consen 18 NPERFALYFV 27 (153)
T ss_pred ChHHHHHHHH
Confidence 3344444333
No 181
>PF06168 DUF981: Protein of unknown function (DUF981); InterPro: IPR009324 This is a family of uncharacterised proteins found in bacteria and archaea.
Probab=21.43 E-value=5.4e+02 Score=22.32 Aligned_cols=107 Identities=13% Similarity=0.112 Sum_probs=46.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHH-HHHHHHHHHHHHHHHHhcccCCcccccccccchhHHH
Q 016399 48 ISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAMTLNFALQFI-LLALVGITANQGFYLLGLENTSPTFASAIQNSVPAIT 126 (390)
Q Consensus 48 ~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~ 126 (390)
+||.++...-...+.+.........-++++++..++.|...+ ..|++... ..++-.-.--.|.+..-++.-..|++.
T Consensus 4 iD~L~~~L~~l~~~~~~~ay~~~~~~~~~~~~~~~~~~~~~f~~lG~~~li--tGl~~~~TWPLPgsYNIlFgd~~~lfG 81 (191)
T PF06168_consen 4 IDPLTLMLFTLGAGLLLIAYYVYKNFRGGRKRSLNRSWAPFFGALGLFALI--TGLWGTFTWPLPGSYNILFGDPWLLFG 81 (191)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHhHHHHHHHHHHHHHH--HHHHheeeecCCCcccchHhhhHHHHH
Confidence 567776666665666555444443323222223333444433 66665322 222221111233444444445555554
Q ss_pred HHHHH--HHhhccccccccCccccchhHHHHHhhhhHHh
Q 016399 127 FLMAA--IFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (390)
Q Consensus 127 ~ila~--l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 163 (390)
.++-. +.+..+.. .+..++...+.|+..+.
T Consensus 82 v~lL~~~~~l~~~~~-------L~~~~~~~~flGl~~iv 113 (191)
T PF06168_consen 82 VLLLSAGLALYRGWD-------LRPLGIFALFLGLILIV 113 (191)
T ss_pred HHHHHHHHHHHcCch-------HHHHHHHHHHHHHHHHH
Confidence 44322 11111122 35555555556655554
No 182
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=21.37 E-value=7e+02 Score=25.20 Aligned_cols=12 Identities=17% Similarity=-0.219 Sum_probs=5.3
Q ss_pred hhHHHHHHHHHH
Q 016399 122 VPAITFLMAAIF 133 (390)
Q Consensus 122 ~pi~~~ila~l~ 133 (390)
..++..+++.-+
T Consensus 182 g~i~ggliA~g~ 193 (495)
T KOG2533|consen 182 GNIFGGLIAYGV 193 (495)
T ss_pred hhHHHHHHHHHh
Confidence 344444444443
No 183
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=21.16 E-value=6.2e+02 Score=22.90 Aligned_cols=36 Identities=17% Similarity=-0.022 Sum_probs=19.5
Q ss_pred HHhcCCceeeeehhhhHHHHHHHHHHHHhCCCchhh
Q 016399 290 CIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLG 325 (390)
Q Consensus 290 a~~~~~~~~~s~~~~~~pv~~~l~~~~~~~e~~~~~ 325 (390)
..++.++........++=..-++-..+++.-.-...
T Consensus 115 cy~~gp~~~~rs~~~v~W~Lqligl~lI~~ss~~~~ 150 (249)
T PF10225_consen 115 CYRYGPPVDPRSRNFVKWALQLIGLVLIYFSSQDPE 150 (249)
T ss_pred hcccCCCccHhHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 445677776666666655555555444444333333
No 184
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=21.10 E-value=7.1e+02 Score=23.53 Aligned_cols=32 Identities=16% Similarity=-0.004 Sum_probs=14.4
Q ss_pred HHHHHHHHhCCCchhhHHHHHHHHHHHhhhee
Q 016399 310 VAIMASFALGEEFYLGGIIGAVLIVVGLYLVL 341 (390)
Q Consensus 310 ~~l~~~~~~~e~~~~~~~iG~~li~~gv~l~~ 341 (390)
..+.+++.-.-......++++++.+++.++..
T Consensus 355 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (399)
T PRK05122 355 GPLAGLVASWFGYPSIFLAAALAALLGLALTW 386 (399)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 33444433222344444555555555554443
No 185
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=20.87 E-value=54 Score=24.28 Aligned_cols=26 Identities=31% Similarity=0.314 Sum_probs=19.9
Q ss_pred CchhhHHHHHHHHHHHhhheeecCcc
Q 016399 321 EFYLGGIIGAVLIVVGLYLVLWGKSE 346 (390)
Q Consensus 321 ~~~~~~~iG~~li~~gv~l~~~~~~~ 346 (390)
..++..++|+++++.|..++..+..+
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~~~ 29 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRFFR 29 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 46788899999999998888754433
No 186
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=20.76 E-value=6.6e+02 Score=23.06 Aligned_cols=18 Identities=6% Similarity=0.036 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHhhhhCC
Q 016399 213 LSWSGWLVMQAPVLKKYP 230 (390)
Q Consensus 213 ~~~a~~~v~~k~~~~~~~ 230 (390)
+.+.+..+...+..++.+
T Consensus 41 ~~~~~~~~~~g~l~dr~g 58 (379)
T TIGR00881 41 IAYGISKFVMGSVSDRSN 58 (379)
T ss_pred HHHHhhhhhhhHHHHhhC
Confidence 333444444444444443
No 187
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=20.75 E-value=2.3e+02 Score=21.17 Aligned_cols=32 Identities=25% Similarity=0.207 Sum_probs=17.0
Q ss_pred HHhhccccccccCccccchhHHHHHhhhhHHh
Q 016399 132 IFRIEKVRLDRKDGIAKVVGTLFCVAGATVIT 163 (390)
Q Consensus 132 l~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 163 (390)
+.-+|++|+|--.+|.-+-+..-...|++++.
T Consensus 24 L~s~Epit~RL~iGR~ilGs~~S~~Aga~Li~ 55 (89)
T PF04550_consen 24 LASNEPITLRLFIGRVILGSAVSVVAGAALIQ 55 (89)
T ss_pred HccCCCCchhHHhHHHHHhhHHHHHHHHHHhc
Confidence 34578888864444444444444444555543
No 188
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=20.20 E-value=7.4e+02 Score=23.37 Aligned_cols=16 Identities=13% Similarity=0.179 Sum_probs=7.5
Q ss_pred hHHHHHHHHHHhhccc
Q 016399 123 PAITFLMAAIFRIEKV 138 (390)
Q Consensus 123 pi~~~ila~l~l~e~~ 138 (390)
.++..++...+.+|+.
T Consensus 167 ~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 167 GILVLLLSLFILKETR 182 (392)
T ss_pred HHHHHHHHHHHcCCCC
Confidence 3334444445555543
Done!