Query 016408
Match_columns 390
No_of_seqs 262 out of 1697
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 06:35:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016408.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016408hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00341 Ring-infected erythro 100.0 1.2E-62 2.5E-67 525.9 32.3 303 1-312 581-904 (1136)
2 PF14308 DnaJ-X: X-domain of D 100.0 7.5E-50 1.6E-54 372.7 22.9 194 120-313 2-195 (204)
3 KOG0691 Molecular chaperone (D 100.0 4.4E-45 9.5E-50 355.2 23.6 279 1-301 13-291 (296)
4 PTZ00475 RESA-like protein; Pr 100.0 4E-39 8.7E-44 307.4 22.6 233 67-302 2-279 (282)
5 COG0484 DnaJ DnaJ-class molecu 99.9 3.1E-24 6.8E-29 214.2 9.6 83 1-83 12-103 (371)
6 KOG0713 Molecular chaperone (D 99.9 7E-23 1.5E-27 200.3 7.9 80 1-80 24-108 (336)
7 KOG0712 Molecular chaperone (D 99.8 1.3E-20 2.8E-25 186.1 7.3 77 1-80 12-88 (337)
8 PRK14288 chaperone protein Dna 99.8 1.6E-19 3.5E-24 182.5 9.2 64 1-64 11-74 (369)
9 PRK14296 chaperone protein Dna 99.8 3.2E-19 7E-24 180.5 8.2 63 1-64 12-74 (372)
10 PRK14286 chaperone protein Dna 99.8 5.7E-19 1.2E-23 178.7 9.2 64 1-64 12-75 (372)
11 PRK14287 chaperone protein Dna 99.7 2.4E-18 5.3E-23 174.0 9.4 80 1-81 12-98 (371)
12 PRK14285 chaperone protein Dna 99.7 2.6E-18 5.6E-23 173.5 9.1 64 1-64 11-74 (365)
13 PRK14279 chaperone protein Dna 99.7 2.7E-18 5.8E-23 174.9 9.1 61 1-61 17-77 (392)
14 PRK14282 chaperone protein Dna 99.7 2.7E-18 5.9E-23 173.6 8.4 64 1-64 12-76 (369)
15 PRK14276 chaperone protein Dna 99.7 4.2E-18 9.2E-23 172.8 8.9 63 1-64 12-74 (380)
16 PRK14297 chaperone protein Dna 99.7 4E-18 8.7E-23 173.0 8.6 64 1-64 12-75 (380)
17 PTZ00037 DnaJ_C chaperone prot 99.7 3.9E-18 8.5E-23 174.9 8.3 77 1-81 36-113 (421)
18 PRK14294 chaperone protein Dna 99.7 6E-18 1.3E-22 170.9 9.2 64 1-64 12-75 (366)
19 PRK14298 chaperone protein Dna 99.7 5.4E-18 1.2E-22 171.9 8.6 63 1-64 13-75 (377)
20 PRK14277 chaperone protein Dna 99.7 7.2E-18 1.6E-22 171.5 9.3 64 1-64 13-76 (386)
21 PHA03102 Small T antigen; Revi 99.7 5.9E-18 1.3E-22 151.1 7.2 89 1-94 13-103 (153)
22 KOG0718 Molecular chaperone (D 99.7 2.1E-17 4.6E-22 166.8 11.4 95 1-129 17-115 (546)
23 PRK14284 chaperone protein Dna 99.7 9.4E-18 2E-22 170.9 8.9 63 1-63 9-71 (391)
24 PRK14301 chaperone protein Dna 99.7 8.3E-18 1.8E-22 170.3 7.8 64 1-64 12-75 (373)
25 PRK14280 chaperone protein Dna 99.7 1.3E-17 2.7E-22 169.2 9.1 63 1-64 12-74 (376)
26 PRK14299 chaperone protein Dna 99.7 2E-17 4.2E-22 162.4 9.8 61 1-62 12-72 (291)
27 PRK14278 chaperone protein Dna 99.7 1.4E-17 3E-22 169.0 8.9 60 1-61 11-70 (378)
28 PRK14295 chaperone protein Dna 99.7 2E-17 4.3E-22 168.4 8.5 64 1-64 17-84 (389)
29 PRK14291 chaperone protein Dna 99.7 2.5E-17 5.4E-22 167.3 8.6 62 1-63 11-72 (382)
30 PRK10767 chaperone protein Dna 99.7 3.2E-17 6.9E-22 165.9 9.1 64 1-64 12-75 (371)
31 PRK14283 chaperone protein Dna 99.7 2.2E-17 4.8E-22 167.5 7.3 63 1-64 13-75 (378)
32 PRK14290 chaperone protein Dna 99.7 4.6E-17 1E-21 164.4 9.0 81 1-81 11-102 (365)
33 KOG0716 Molecular chaperone (D 99.7 3.4E-17 7.4E-22 156.1 6.2 63 1-63 39-101 (279)
34 PRK14281 chaperone protein Dna 99.7 8.9E-17 1.9E-21 164.0 8.9 64 1-64 11-74 (397)
35 TIGR02349 DnaJ_bact chaperone 99.7 1.1E-16 2.4E-21 160.9 8.7 63 1-64 8-70 (354)
36 PRK14292 chaperone protein Dna 99.7 1.8E-16 4E-21 160.4 9.2 80 1-81 10-97 (371)
37 PRK14289 chaperone protein Dna 99.6 3.2E-16 6.9E-21 159.4 9.3 64 1-64 13-76 (386)
38 KOG0717 Molecular chaperone (D 99.6 4.2E-16 9E-21 157.4 7.7 63 1-63 16-79 (508)
39 KOG0715 Molecular chaperone (D 99.6 5.1E-16 1.1E-20 152.1 7.8 79 1-81 51-129 (288)
40 PRK14300 chaperone protein Dna 99.6 6.3E-16 1.4E-20 156.6 8.0 63 1-64 11-73 (372)
41 PRK14293 chaperone protein Dna 99.6 9.2E-16 2E-20 155.5 8.8 63 1-64 11-73 (374)
42 PRK10266 curved DNA-binding pr 99.6 1.5E-15 3.2E-20 150.1 9.2 60 1-61 12-71 (306)
43 KOG0719 Molecular chaperone (D 99.6 2.9E-14 6.3E-19 133.5 11.6 61 2-62 23-85 (264)
44 PF00226 DnaJ: DnaJ domain; I 99.5 4E-14 8.8E-19 107.8 6.8 56 1-56 8-64 (64)
45 TIGR03835 termin_org_DnaJ term 99.5 9.5E-14 2.1E-18 148.2 8.7 64 1-65 10-73 (871)
46 COG2214 CbpA DnaJ-class molecu 99.4 2.9E-13 6.2E-18 123.3 7.5 59 1-59 14-73 (237)
47 KOG0721 Molecular chaperone (D 99.3 1.9E-12 4.2E-17 120.3 7.6 65 1-65 107-171 (230)
48 smart00271 DnaJ DnaJ molecular 99.3 4.3E-12 9.3E-17 95.1 6.1 50 1-50 9-59 (60)
49 KOG0714 Molecular chaperone (D 99.3 2.8E-12 6.1E-17 122.4 6.3 80 1-80 11-105 (306)
50 cd06257 DnaJ DnaJ domain or J- 99.3 1.2E-11 2.6E-16 90.9 6.5 48 1-48 8-55 (55)
51 KOG0624 dsRNA-activated protei 99.2 9.2E-12 2E-16 123.1 4.7 60 1-61 402-464 (504)
52 PRK00294 hscB co-chaperone Hsc 99.2 4.6E-10 9.9E-15 102.6 15.4 53 5-57 18-75 (173)
53 KOG0550 Molecular chaperone (D 99.2 1.5E-11 3.3E-16 123.7 5.9 78 1-78 381-461 (486)
54 PRK05014 hscB co-chaperone Hsc 99.2 3.2E-10 6.8E-15 103.5 13.7 54 4-57 14-72 (171)
55 PRK03578 hscB co-chaperone Hsc 99.2 8.9E-10 1.9E-14 101.0 14.7 58 4-61 19-83 (176)
56 PRK01356 hscB co-chaperone Hsc 99.1 2.6E-10 5.7E-15 103.6 7.4 55 4-58 15-72 (166)
57 KOG0722 Molecular chaperone (D 99.0 2.7E-10 5.9E-15 108.2 4.3 57 1-58 41-97 (329)
58 TIGR00714 hscB Fe-S protein as 99.0 7.9E-10 1.7E-14 99.6 7.0 55 4-58 2-61 (157)
59 KOG0720 Molecular chaperone (D 98.9 7.5E-10 1.6E-14 112.6 5.6 57 1-58 243-299 (490)
60 PHA02624 large T antigen; Prov 98.9 2.1E-09 4.5E-14 114.1 8.0 75 1-79 19-97 (647)
61 PTZ00100 DnaJ chaperone protei 98.8 1.1E-08 2.4E-13 87.5 5.4 43 1-47 73-115 (116)
62 COG5407 SEC63 Preprotein trans 98.5 1.3E-07 2.9E-12 96.2 5.9 65 1-65 106-175 (610)
63 KOG1150 Predicted molecular ch 98.4 4.6E-07 9.9E-12 83.8 6.0 55 1-55 61-116 (250)
64 PRK01773 hscB co-chaperone Hsc 98.4 7.1E-07 1.5E-11 81.8 7.0 52 5-56 16-72 (173)
65 COG5269 ZUO1 Ribosome-associat 98.3 1E-06 2.2E-11 84.9 6.9 73 4-76 57-132 (379)
66 KOG1789 Endocytosis protein RM 98.0 4.8E-06 1E-10 91.8 5.1 38 7-47 1299-1336(2235)
67 PRK09430 djlA Dna-J like membr 97.4 0.00015 3.2E-09 70.8 3.8 36 1-37 208-243 (267)
68 KOG0568 Molecular chaperone (D 96.5 0.0036 7.9E-08 59.5 4.8 45 3-48 57-102 (342)
69 COG1076 DjlA DnaJ-domain-conta 94.0 0.062 1.3E-06 49.2 4.1 51 7-57 17-72 (174)
70 KOG0723 Molecular chaperone (D 93.4 0.15 3.3E-06 43.2 4.9 45 1-49 64-108 (112)
71 KOG3192 Mitochondrial J-type c 93.2 0.34 7.3E-06 43.8 7.2 68 7-74 24-98 (168)
72 KOG0917 Uncharacterized conser 86.3 25 0.00054 34.8 13.9 91 253-358 109-202 (338)
73 KOG0724 Zuotin and related mol 82.6 1.2 2.5E-05 44.6 3.4 56 4-59 3-62 (335)
74 PF03207 OspD: Borrelia outer 60.3 55 0.0012 30.2 8.2 30 251-280 187-222 (254)
75 PF14687 DUF4460: Domain of un 59.8 19 0.00041 30.8 4.9 46 3-48 4-53 (112)
76 KOG0543 FKBP-type peptidyl-pro 50.6 1.5E+02 0.0032 31.0 10.4 63 236-298 244-306 (397)
77 PF11833 DUF3353: Protein of u 49.4 33 0.00071 32.1 5.1 38 2-47 1-38 (194)
78 PF04719 TAFII28: hTAFII28-lik 42.1 1.1E+02 0.0023 25.3 6.5 58 235-303 7-65 (90)
79 COG1698 Uncharacterized protei 39.0 65 0.0014 26.7 4.6 34 263-296 10-46 (93)
80 PF12434 Malate_DH: Malate deh 26.7 67 0.0014 20.8 2.2 17 7-23 10-26 (28)
81 PF14891 Peptidase_M91: Effect 26.1 79 0.0017 28.7 3.6 31 140-171 7-37 (174)
82 cd00084 HMG-box High Mobility 24.5 1.8E+02 0.0039 20.8 4.7 41 12-57 13-53 (66)
83 PF07709 SRR: Seven Residue Re 23.7 49 0.0011 17.8 1.1 13 35-47 2-14 (14)
84 cd01389 MATA_HMG-box MATA_HMG- 21.4 1.7E+02 0.0036 22.5 4.2 42 11-57 13-54 (77)
85 PRK04330 hypothetical protein; 21.4 1.8E+02 0.004 23.9 4.4 54 263-324 6-62 (88)
86 cd01390 HMGB-UBF_HMG-box HMGB- 21.1 1.8E+02 0.0038 21.1 4.1 39 15-58 16-54 (66)
87 PF03685 UPF0147: Uncharacteri 20.9 1.6E+02 0.0034 24.2 3.9 53 264-324 4-59 (85)
No 1
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=100.00 E-value=1.2e-62 Score=525.90 Aligned_cols=303 Identities=17% Similarity=0.300 Sum_probs=258.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCCCCCcCChHHHhhhhhc
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFG 80 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~~~~~~dp~~~f~~~Fg 80 (390)
|+++||..+||+|||+||++||||||+++ .|.++|++|++||+|||||.+|+.||+||..|+..++++||..|| ++||
T Consensus 581 Vs~dAS~~EIKKAYRKLAlkyHPDKN~~~-~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~~~~iDP~~Ff-mlFg 658 (1136)
T PTZ00341 581 VGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKGVNFIHPSIFY-LLAS 658 (1136)
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCCCCccCHHHHH-HHhh
Confidence 57999999999999999999999999964 788999999999999999999999999999999998999999877 7899
Q ss_pred Cchhhhhhhhhhhhhhhhcc----ccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhccccccCChHHHHHHHHHHHH
Q 016408 81 SELFEDYIGQLAMASVASLD----IFTEGEEFDAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVS 156 (390)
Q Consensus 81 ~~~f~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~q~~Re~~La~~L~~rL~~yv~g~~~~f~~~~~~Ea~ 156 (390)
++.|.+|+|.+.|++++... +...+.....+.+++.|++.|++|+.+||.+|++||++||+|+. .|...++.||+
T Consensus 659 se~F~dYiG~l~iatl~k~~fe~~~s~~d~~~~~e~l~e~m~~~QkeRE~kLA~~LkdRL~~YVdgd~-~w~~~~e~Ei~ 737 (1136)
T PTZ00341 659 LEKFADFTGSPQIVTLLKFFFEKKLSMNDLDNKSEHLLKFMEQYQKEREAHISENLINILQPCIAGDR-KWDVPIIDKIE 737 (1136)
T ss_pred hHHHHHhcCCHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccH-HHHHHHHHHHH
Confidence 99999999999999765421 11111111235788999999999999999999999999999886 59999999999
Q ss_pred HHhhccchHHHHHHHHHHHHHHHHHHhhhcccccCcchhHHhhhccchhHHHHHHHHHHHH-HHHHHHHHHHHhhhhc--
Q 016408 157 RLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAI-ALIQLQEDMKKQLSAE-- 233 (390)
Q Consensus 157 ~L~~~sFG~~iL~~IG~vY~~~A~~~Lg~~~~~lGv~~~~~~~r~kg~~~k~~~~~a~~a~-~~~~~~~~~~k~~~~~-- 233 (390)
.|+.+|||..|||+|||||.++|+.|||+.++ |+++++.+++.++.+++++++.+.+++ .++..++.+.+.....
T Consensus 738 ~L~~sSFG~~IL~tIGwiY~n~A~~fL~~~k~--g~~kl~~r~k~n~~~v~~~~n~lss~lkda~~t~eq~nki~~n~En 815 (1136)
T PTZ00341 738 ELKGSPFDIAIIDSIGWIFKHVAKSHLKKPKK--AAKKLEQRSKANKEELANENNKLMNILKEYFGNNEQINSITYNFEN 815 (1136)
T ss_pred HHHhccchHHHHHHHHHHHHHHHHHHHhccch--hHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhhhcc
Confidence 99999999999999999999999999998765 777889899999988888887777666 5555555554322100
Q ss_pred --------------CCCCHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Q 016408 234 --------------GNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKI 299 (390)
Q Consensus 234 --------------~~~~eee~~~~~~~~~~~iL~alW~~~~~DIe~Tlr~VC~kVL~D~~V~~e~R~kRA~AL~~LG~i 299 (390)
.+++.+ + ....++++|.++|+++++|||+|||.||++||.|++||.++|++||+||++||.+
T Consensus 816 ~t~~~~nen~~k~i~~l~~e---e-e~~ilgkiL~~iw~isl~DIE~TVR~VCekVL~Dk~Vd~ktRikRAeaLkiLG~i 891 (1136)
T PTZ00341 816 INLNEDNENGSKKILDLNHK---D-QKEIFEEIISYIVDISLSDIENTAKNAAEQILSDEGLDEKKLKKRAESLKKLANA 891 (1136)
T ss_pred cccccccccccccccccCHH---H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 011222 1 4566899999999999999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCCCc
Q 016408 300 FQRAKSNNGSEGE 312 (390)
Q Consensus 300 f~~~~~~~~e~~~ 312 (390)
|+++......+..
T Consensus 892 Mqk~a~~~K~~KK 904 (1136)
T PTZ00341 892 IEKYAGGGKKDKK 904 (1136)
T ss_pred HHHHHhhcccccc
Confidence 9999877665443
No 2
>PF14308 DnaJ-X: X-domain of DnaJ-containing
Probab=100.00 E-value=7.5e-50 Score=372.66 Aligned_cols=194 Identities=39% Similarity=0.613 Sum_probs=186.2
Q ss_pred HHHHHHHHHHHHHHhhccccccCChHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHhhhcccccCcchhHHhh
Q 016408 120 VQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWF 199 (390)
Q Consensus 120 ~q~~Re~~La~~L~~rL~~yv~g~~~~f~~~~~~Ea~~L~~~sFG~~iL~~IG~vY~~~A~~~Lg~~~~~lGv~~~~~~~ 199 (390)
.|++|+.+||.+|++||++||+|+.+.|.+.|+.||++|+.+|||.+|||+|||||.++|++|||+..+|+|++++++++
T Consensus 2 ~q~~R~~~La~~L~~rL~~yv~~~~~~f~~~~~~Ea~~L~~~sFg~~iL~~IG~vY~~~A~~~l~~~~~~lG~~~~~~~~ 81 (204)
T PF14308_consen 2 EQKEREVELAEKLRDRLQPYVDGDKEEFKEKMEEEAEDLKEESFGVEILHSIGWVYENKAKQFLGKKKTFLGIGGFFARM 81 (204)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHhcccccChHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCC
Q 016408 200 RNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDN 279 (390)
Q Consensus 200 r~kg~~~k~~~~~a~~a~~~~~~~~~~~k~~~~~~~~~eee~~~~~~~~~~~iL~alW~~~~~DIe~Tlr~VC~kVL~D~ 279 (390)
+.++|.++++|++++++++++++++++.+.....++.++++++++++..++++|+++|+++++|||+|||.||++||+|+
T Consensus 82 k~k~~~~k~~~~~~~sa~~~~~~~~~~~~~~~~~~~~~~e~~~~~e~~~~~~~L~~~w~~~~~DIe~Tlr~Vc~~VL~D~ 161 (204)
T PF14308_consen 82 KEKGRSVKNQFSTAKSALDAQSTMEELQKAEEKNGEENEEERAELEEEILGKMLDAIWKINKFDIESTLREVCDKVLYDK 161 (204)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 99999999999999999999999999988876656788899999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhcccCCCCCCcc
Q 016408 280 NAKKEELRARAKALKTLGKIFQRAKSNNGSEGET 313 (390)
Q Consensus 280 ~V~~e~R~kRA~AL~~LG~if~~~~~~~~e~~~~ 313 (390)
+||.++|++||+||++||+||+++++.+.+.+++
T Consensus 162 ~V~~~~r~~RA~aL~~LG~if~~~~~~~~~~~~~ 195 (204)
T PF14308_consen 162 GVDKETRLKRAEALKILGKIFQKVKRDKKEKEEA 195 (204)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCccccchH
Confidence 9999999999999999999999999998777665
No 3
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.4e-45 Score=355.20 Aligned_cols=279 Identities=37% Similarity=0.504 Sum_probs=242.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCCCCCcCChHHHhhhhhc
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFG 80 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~~~~~~dp~~~f~~~Fg 80 (390)
|..+||..||+||||++|++|||||||+||+|.++|+.|++||+||+|+.+|..||++|..+....++.++.++|...||
T Consensus 13 i~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~~~~~d~~~~~r~~f~ 92 (296)
T KOG0691|consen 13 ISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSAQGREDQADGFRKKFG 92 (296)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccchhhhhHHHHHHHHhh
Confidence 56899999999999999999999999999999999999999999999999999999999998877788999999999999
Q ss_pred CchhhhhhhhhhhhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhccccccCChHHHHHHHHHHHHHHhh
Q 016408 81 SELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEREEKLADILRGRLNQYVQGNKEDFINYAEAEVSRLSN 160 (390)
Q Consensus 81 ~~~f~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Re~~La~~L~~rL~~yv~g~~~~f~~~~~~Ea~~L~~ 160 (390)
++.|++|+|.+++.... .+...+ ...++++....|++|+..|++.|+++|++|+.+. + ++.+..|+..|..
T Consensus 93 ~dl~~~~~~~~a~~~~~-~e~~~e-----~~~~~~k~~~~~~er~~~l~~~~~~~l~~~~~~~-~--~~~~~~e~~~l~~ 163 (296)
T KOG0691|consen 93 SDLFERERGALALLKES-EESELE-----RERLQEKFRAVQRERVDKLVEILREKLSEVVESV-E--ERKLATEALQLQR 163 (296)
T ss_pred hhhhhhHHHHHhHHhhh-hhhhhh-----HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-h--hhhhhHHHHHHHH
Confidence 99999999999988654 111110 1144558888999999999999999999999977 3 8889999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhhhcccccCcchhHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCHHH
Q 016408 161 AAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEE 240 (390)
Q Consensus 161 ~sFG~~iL~~IG~vY~~~A~~~Lg~~~~~lGv~~~~~~~r~kg~~~k~~~~~a~~a~~~~~~~~~~~k~~~~~~~~~eee 240 (390)
++||.++||+||.+|.+.....+++..+++|+++++.+.+.+|+.++.+|+++..++.++..+.++.+.....+...++.
T Consensus 164 e~~~~e~~~~~g~~y~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~e~~ 243 (296)
T KOG0691|consen 164 ERFGEELLHTIGRTYSRTKALKPIKFRTSPGVSKLSEGSRAKGGALRAMWNLAAGAVALYGGQDEMEKLLEALGEALEKR 243 (296)
T ss_pred hhhhHHHHHhhcccchhhHhhhccccccccCcchhhhcccccchhHHHHHhhhHHHHHHHHHHHHHHhhhcchHHHhhhc
Confidence 99999999999999996444444455568999999999999999999999999999999999988887655433333332
Q ss_pred HHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Q 016408 241 LEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKIFQ 301 (390)
Q Consensus 241 ~~~~~~~~~~~iL~alW~~~~~DIe~Tlr~VC~kVL~D~~V~~e~R~kRA~AL~~LG~if~ 301 (390)
.++....++++++++|+++++||++||+.||++| +|++|+. .|+.+|+
T Consensus 244 -~~~~~~~~~~~~~~~~~~s~~dies~l~~~~~~~-~d~~v~~-----------~i~~~~~ 291 (296)
T KOG0691|consen 244 -AEYASAKTGKSLDTLWHGSSFDIESTLIRVCQKI-KDPSVPL-----------LIFQRFK 291 (296)
T ss_pred -hHHHHHhhcchhhhhhHhHHHHHHHHHHHHHHHh-cChHHHH-----------HHHHHHH
Confidence 5667777899999999999999999999999999 9999997 7777777
No 4
>PTZ00475 RESA-like protein; Provisional
Probab=100.00 E-value=4e-39 Score=307.44 Aligned_cols=233 Identities=24% Similarity=0.379 Sum_probs=172.8
Q ss_pred CcCChHHHhhhhhcCchhhhhhhhhhhhhhhhc----cccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhccccccC
Q 016408 67 AIIDPAAIFAMLFGSELFEDYIGQLAMASVASL----DIFTEGEEFDAKKLQDKMKVVQKEREEKLADILRGRLNQYVQG 142 (390)
Q Consensus 67 ~~~dp~~~f~~~Fg~~~f~~~~G~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~q~~Re~~La~~L~~rL~~yv~g 142 (390)
+++||..+|.++||++.+.+|||.+.|+++++. .++.++.+.+.+++.+.|++.|++||++||..|++||++||+|
T Consensus 2 ~iIDP~~fF~mlFgSe~l~~YIG~L~ma~~v~l~fe~~~~~edi~~~~~~i~~~M~~~QkeRE~kLAl~LrdrLq~YVdg 81 (282)
T PTZ00475 2 IIIVPFIFFNLIFTSDMMYEYIENTKVPIFVKLFFGKSIFIEDIFYYVGMIMKEMMEGQNIREEEVAELLKDRLDLYIDN 81 (282)
T ss_pred ccccHHHHHHHHHhHHHHHHHHhHHHHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 568999999999999999999999999998754 3334444556788999999999999999999999999999987
Q ss_pred ChHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHhhhcccccCcchhHHh--------hhccc---hhHHHHHH
Q 016408 143 NKEDFINYAEAEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEW--------FRNKG---HFIKSQVT 211 (390)
Q Consensus 143 ~~~~f~~~~~~Ea~~L~~~sFG~~iL~~IG~vY~~~A~~~Lg~~~~~lGv~~~~~~--------~r~kg---~~~k~~~~ 211 (390)
.++|+..|+.||++|+.+|||..|||+|||+|.++|++|||..+.. |++.-... .|++- .-.+..++
T Consensus 82 -~~ew~~~~e~Eak~L~~ssFg~~iLesIGwiY~Nva~~ylge~~~~-~l~~k~~~~~~~~~r~~rn~~~l~~~~~~~~~ 159 (282)
T PTZ00475 82 -EDEWEKLMENEISMLLKSSFSNFILESIGWTYENVSNIFLEEKANS-GINKKDIYLKEANERMIRNSIVLRQCKSRFIS 159 (282)
T ss_pred -hHHHHHHHHHHHHHHHhCcccHHHHHHhHHHHHHHHHHHHHHhhhh-hhhhHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999999999999987654 65432211 22221 00111112
Q ss_pred HHHHHHHHHHHHHH---HHHhhhh-----------------------cCCCCHHHHH----HHHHHhHHHHHHHHHHHhH
Q 016408 212 AATGAIALIQLQED---MKKQLSA-----------------------EGNYTEEELE----EYMQSHKKLMIDSLWKLNV 261 (390)
Q Consensus 212 ~a~~a~~~~~~~~~---~~k~~~~-----------------------~~~~~eee~~----~~~~~~~~~iL~alW~~~~ 261 (390)
.+++-+........ .++..+. +..+. +.+. +......+.+|..+.++++
T Consensus 160 ~~~~~~~~~~~~n~~~~~~~~~~ss~~~~~d~~nn~~~~~~~~~~~~~n~~~-~ni~~l~~~ek~kil~~il~~i~~i~l 238 (282)
T PTZ00475 160 IITNYYPFKEQNNPFIKQAQYVSSSNYVLDDIINNIDYSIDNIHRAIDNLYY-EHILNLLEEEKNEILEEILRNILKIIL 238 (282)
T ss_pred HHHhhccchhhhhhHHHHhhhcccccccccccccchhhhhhhhhhhhhhhhh-hhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 22222222100000 0010000 00001 1111 1122335789999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHh
Q 016408 262 ADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKIFQR 302 (390)
Q Consensus 262 ~DIe~Tlr~VC~kVL~D~~V~~e~R~kRA~AL~~LG~if~~ 302 (390)
+|||.|||.||++||+|++||.++|++||++|.+||.++.+
T Consensus 239 ~DIE~Tvk~~a~~vl~d~~vd~~~~~kRa~~l~~LG~~~l~ 279 (282)
T PTZ00475 239 CDVETTVRRSAQKVLQNAEGDTNLMLKRAKGLQSLGKMILQ 279 (282)
T ss_pred HHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999865
No 5
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=3.1e-24 Score=214.21 Aligned_cols=83 Identities=37% Similarity=0.602 Sum_probs=72.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCCCCC--------cC-Ch
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEA--------II-DP 71 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~~~~--------~~-dp 71 (390)
|+++||.+|||||||+||+|||||+|+++++|+++|++|+|||+|||||++|+.||+||..++...+ +. |.
T Consensus 12 V~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~gg~g~~~fgg~~ 91 (371)
T COG0484 12 VSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFGGFGFGGFGGDF 91 (371)
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcCCCCcCCCCCCH
Confidence 6899999999999999999999999999999999999999999999999999999999999875221 11 46
Q ss_pred HHHhhhhhcCch
Q 016408 72 AAIFAMLFGSEL 83 (390)
Q Consensus 72 ~~~f~~~Fg~~~ 83 (390)
.++|..|||+..
T Consensus 92 ~DIF~~~FgGg~ 103 (371)
T COG0484 92 GDIFEDFFGGGG 103 (371)
T ss_pred HHHHHHhhcCCC
Confidence 777777776443
No 6
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=7e-23 Score=200.31 Aligned_cols=80 Identities=40% Similarity=0.659 Sum_probs=69.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCCCCC---cCCh--HHHh
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEA---IIDP--AAIF 75 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~~~~---~~dp--~~~f 75 (390)
|+++||..|||+||||||+||||||||+||.|.++|++|+.||+|||||++|+.||+||.+++...+ .++. .++|
T Consensus 24 V~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~~~~~~g~~~~~~f 103 (336)
T KOG0713|consen 24 VPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDENKDGEGGGGGNDIF 103 (336)
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcccccccccCCcccchH
Confidence 6899999999999999999999999999999999999999999999999999999999999887432 2222 3566
Q ss_pred hhhhc
Q 016408 76 AMLFG 80 (390)
Q Consensus 76 ~~~Fg 80 (390)
+.+|+
T Consensus 104 ~~~f~ 108 (336)
T KOG0713|consen 104 SAFFG 108 (336)
T ss_pred HHhhc
Confidence 66665
No 7
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=1.3e-20 Score=186.14 Aligned_cols=77 Identities=36% Similarity=0.587 Sum_probs=65.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCCCCCcCChHHHhhhhhc
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFG 80 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~~~~~~dp~~~f~~~Fg 80 (390)
+.++||.+|||||||+||++|||||||+ |.++|++|++||+|||||++|++||+||+++++.++.......|++|||
T Consensus 12 v~~~As~~eikkayrkla~k~HpDkn~~---~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~~g~~~f~~~F~ 88 (337)
T KOG0712|consen 12 VSPDASEEEIKKAYRKLALKYHPDKNPD---AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGGGGFGGFSQFFG 88 (337)
T ss_pred cCCCcCHHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCCCCCccHHHhcc
Confidence 5789999999999999999999999995 8899999999999999999999999999998876543221111677776
No 8
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=1.6e-19 Score=182.53 Aligned_cols=64 Identities=38% Similarity=0.574 Sum_probs=60.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~ 64 (390)
|+++||..|||+|||+||++||||+|+.+++|+++|++|++||+|||||++|+.||+||..++.
T Consensus 11 v~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~ 74 (369)
T PRK14288 11 VEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLN 74 (369)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccc
Confidence 6799999999999999999999999998889999999999999999999999999999987654
No 9
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.78 E-value=3.2e-19 Score=180.46 Aligned_cols=63 Identities=29% Similarity=0.421 Sum_probs=59.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~ 64 (390)
|+++||..|||+|||+||++||||+|+ +++|+++|++|++||+|||||++|+.||+||..++.
T Consensus 12 v~~~a~~~eik~ayrkla~~~HPD~n~-~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~ 74 (372)
T PRK14296 12 VSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFD 74 (372)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCcCCCC-CchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhc
Confidence 579999999999999999999999998 688999999999999999999999999999987654
No 10
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=5.7e-19 Score=178.72 Aligned_cols=64 Identities=38% Similarity=0.598 Sum_probs=60.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~ 64 (390)
|+++||..|||+|||+||++||||+|+++++|.++|++|++||+|||||.+|+.||+||..++.
T Consensus 12 v~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~ 75 (372)
T PRK14286 12 VSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVN 75 (372)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhc
Confidence 5799999999999999999999999998889999999999999999999999999999987653
No 11
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.75 E-value=2.4e-18 Score=174.04 Aligned_cols=80 Identities=33% Similarity=0.494 Sum_probs=67.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCCCC-------CcCChHH
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTE-------AIIDPAA 73 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~~~-------~~~dp~~ 73 (390)
|+++||..|||+|||+||++||||+|+ +++|+++|++|++||+||+||++|+.||+||..++... ++.+..+
T Consensus 12 v~~~a~~~eik~ayr~la~~~HpD~~~-~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~~~~~~f~~~~d 90 (371)
T PRK14287 12 VDRNASVDEVKKAYRKLARKYHPDVNK-APDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGGGAGDFGGFSD 90 (371)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCCCCCccccchHH
Confidence 579999999999999999999999998 57899999999999999999999999999998765421 1123446
Q ss_pred HhhhhhcC
Q 016408 74 IFAMLFGS 81 (390)
Q Consensus 74 ~f~~~Fg~ 81 (390)
+|..|||+
T Consensus 91 ~f~~~fgg 98 (371)
T PRK14287 91 IFDMFFGG 98 (371)
T ss_pred HHHhhhcc
Confidence 77777764
No 12
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.75 E-value=2.6e-18 Score=173.54 Aligned_cols=64 Identities=33% Similarity=0.428 Sum_probs=60.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~ 64 (390)
|+++||.+|||+|||+||++||||+|+++++|.++|++|++||+||+||.+|..||+||..++.
T Consensus 11 v~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~ 74 (365)
T PRK14285 11 LSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFE 74 (365)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhc
Confidence 5799999999999999999999999998889999999999999999999999999999987653
No 13
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.74 E-value=2.7e-18 Score=174.88 Aligned_cols=61 Identities=41% Similarity=0.622 Sum_probs=58.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKS 61 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~ 61 (390)
|+++||..|||+|||+||++||||+|+++++|.++|++|++||+|||||++|+.||+||..
T Consensus 17 v~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~ 77 (392)
T PRK14279 17 VSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRL 77 (392)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhh
Confidence 6799999999999999999999999998889999999999999999999999999999863
No 14
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.74 E-value=2.7e-18 Score=173.59 Aligned_cols=64 Identities=34% Similarity=0.564 Sum_probs=59.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPND-PLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~-~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~ 64 (390)
|+++||..|||+|||+||++||||+|+++ ++|.++|++|++||+|||||.+|+.||+||..+..
T Consensus 12 v~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~ 76 (369)
T PRK14282 12 VSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQ 76 (369)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccc
Confidence 57999999999999999999999999865 67899999999999999999999999999987653
No 15
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.74 E-value=4.2e-18 Score=172.82 Aligned_cols=63 Identities=37% Similarity=0.608 Sum_probs=59.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~ 64 (390)
|+++||..|||+|||+||++||||+|+ ++.|.++|++|++||+||+||.+|+.||+||..++.
T Consensus 12 v~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~ 74 (380)
T PRK14276 12 VSKDASQDEIKKAYRKLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGAN 74 (380)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCcccc
Confidence 579999999999999999999999998 578999999999999999999999999999987654
No 16
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.73 E-value=4e-18 Score=172.96 Aligned_cols=64 Identities=36% Similarity=0.537 Sum_probs=60.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~ 64 (390)
|+++||.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|+.||+||..++.
T Consensus 12 v~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~ 75 (380)
T PRK14297 12 LEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFN 75 (380)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCccccc
Confidence 5799999999999999999999999998889999999999999999999999999999987653
No 17
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.73 E-value=3.9e-18 Score=174.92 Aligned_cols=77 Identities=35% Similarity=0.637 Sum_probs=66.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCCCC-CcCChHHHhhhhh
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTE-AIIDPAAIFAMLF 79 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~~~-~~~dp~~~f~~~F 79 (390)
|+++||.+|||||||+||++||||||+ + .++|++|++||+|||||.+|+.||+||..++... +..|+.++|..||
T Consensus 36 V~~~As~~eIKkAYrkla~k~HPDk~~-~---~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~~~~~d~~d~f~~~F 111 (421)
T PTZ00037 36 LSKDCTTSEIKKAYRKLAIKHHPDKGG-D---PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQPADASDLFDLIF 111 (421)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCc-h---HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccCCCCcchhhhHHHhh
Confidence 679999999999999999999999996 3 3899999999999999999999999998866432 2346677888888
Q ss_pred cC
Q 016408 80 GS 81 (390)
Q Consensus 80 g~ 81 (390)
|+
T Consensus 112 gg 113 (421)
T PTZ00037 112 GG 113 (421)
T ss_pred cc
Confidence 74
No 18
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.73 E-value=6e-18 Score=170.90 Aligned_cols=64 Identities=41% Similarity=0.633 Sum_probs=60.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~ 64 (390)
|+++||..|||+|||+||++||||+|+++++|.++|++|++||+||+||.+|+.||+||..++.
T Consensus 12 v~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~ 75 (366)
T PRK14294 12 VTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLS 75 (366)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhcccccc
Confidence 5789999999999999999999999998888999999999999999999999999999987654
No 19
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.73 E-value=5.4e-18 Score=171.89 Aligned_cols=63 Identities=40% Similarity=0.613 Sum_probs=59.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~ 64 (390)
|+++||.+|||+|||+||++||||+|+ +++|.++|++|++||+|||||.+|+.||+||..++.
T Consensus 13 v~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~ 75 (377)
T PRK14298 13 LSKDASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGID 75 (377)
T ss_pred CCCCCCHHHHHHHHHHHHHHhCccccC-ChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccc
Confidence 578999999999999999999999998 578999999999999999999999999999987654
No 20
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.73 E-value=7.2e-18 Score=171.46 Aligned_cols=64 Identities=38% Similarity=0.606 Sum_probs=60.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~ 64 (390)
|+++||.+|||+|||+||++||||+|+++++|+++|++|++||+|||||.+|+.||+||..++.
T Consensus 13 v~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~ 76 (386)
T PRK14277 13 VDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFD 76 (386)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccccc
Confidence 6799999999999999999999999998889999999999999999999999999999987654
No 21
>PHA03102 Small T antigen; Reviewed
Probab=99.73 E-value=5.9e-18 Score=151.06 Aligned_cols=89 Identities=15% Similarity=0.151 Sum_probs=79.9
Q ss_pred CCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCCCCCcCChHHHhhhh
Q 016408 1 MLSEV--EPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAML 78 (390)
Q Consensus 1 ~~~~A--s~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~~~~~~dp~~~f~~~ 78 (390)
|+++| |..+||+|||++|+++||||+++ .++|++|++||+||+|+.+|..||.+|........ ..|.++|.++
T Consensus 13 l~~~A~~s~~eIKkAYr~la~~~HPDkgg~----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~~~-~~~~~~f~~~ 87 (153)
T PHA03102 13 LPRSAWGNLPLMRKAYLRKCLEFHPDKGGD----EEKMKELNTLYKKFRESVKSLRDLDGEEDSSSEEE-DVPSGYVGAT 87 (153)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCcCCCch----hHHHHHHHHHHHHHhhHHHhccccccCCccccccc-ccHHHHhhhh
Confidence 57899 99999999999999999999864 37999999999999999999999999998765543 3499999999
Q ss_pred hcCchhhhhhhhhhhh
Q 016408 79 FGSELFEDYIGQLAMA 94 (390)
Q Consensus 79 Fg~~~f~~~~G~~~~~ 94 (390)
||++.|.+|+|.+...
T Consensus 88 fg~~~~~~~~~~~~~c 103 (153)
T PHA03102 88 FGDRVNALYCKDWDTC 103 (153)
T ss_pred cCCcchhhHhcchHHH
Confidence 9999999999998655
No 22
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=2.1e-17 Score=166.83 Aligned_cols=95 Identities=34% Similarity=0.579 Sum_probs=78.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCCCCCcCChHHHhh
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDP----LAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFA 76 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~----~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~~~~~~dp~~~f~ 76 (390)
+++|||.+|||+|||++++-|||||+. || .|+++|+.|.+||+|||||++|++||.||.+|+...++
T Consensus 17 lpkdAt~eeI~~AYrr~~~lfHPDkh~-dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~t~gw-------- 87 (546)
T KOG0718|consen 17 LPKDATDEEIKKAYRRLSRLFHPDKHT-DPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLKTEGW-------- 87 (546)
T ss_pred CCcccCHHHHHHHHHHHHHhcCCcccC-ChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccccccCc--------
Confidence 589999999999999999999999997 44 48899999999999999999999999999999875432
Q ss_pred hhhcCchhhhhhhhhhhhhhhhccccccccccchHHHHHHHHHHHHHHHHHHH
Q 016408 77 MLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEREEKLA 129 (390)
Q Consensus 77 ~~Fg~~~f~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Re~~La 129 (390)
++.... .+++++++++++.|++|+..+-
T Consensus 88 -----------------------El~~r~--~tpeEIreE~Erl~r~~de~~l 115 (546)
T KOG0718|consen 88 -----------------------ELGFRG--KTPEEIREEYERLQRERDERRL 115 (546)
T ss_pred -----------------------eeecCC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 111111 2578899999999998886543
No 23
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.72 E-value=9.4e-18 Score=170.86 Aligned_cols=63 Identities=44% Similarity=0.672 Sum_probs=60.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGI 63 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~ 63 (390)
|+++||++|||+|||+||++||||+|++++.|.++|++|++||+||+||++|+.||+||..++
T Consensus 9 v~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~ 71 (391)
T PRK14284 9 VSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGP 71 (391)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhcccccc
Confidence 579999999999999999999999999888999999999999999999999999999998764
No 24
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.72 E-value=8.3e-18 Score=170.32 Aligned_cols=64 Identities=36% Similarity=0.622 Sum_probs=60.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~ 64 (390)
|+++||.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|+.||+||..++.
T Consensus 12 v~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~ 75 (373)
T PRK14301 12 VSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVN 75 (373)
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccc
Confidence 5789999999999999999999999998888999999999999999999999999999987654
No 25
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.72 E-value=1.3e-17 Score=169.16 Aligned_cols=63 Identities=33% Similarity=0.513 Sum_probs=59.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~ 64 (390)
|+++||..|||+|||+||++||||+|+ ++.|.++|++|++||+|||||.+|+.||+||..++.
T Consensus 12 v~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~ 74 (376)
T PRK14280 12 VSKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPN 74 (376)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccc
Confidence 579999999999999999999999998 578999999999999999999999999999987654
No 26
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.71 E-value=2e-17 Score=162.38 Aligned_cols=61 Identities=41% Similarity=0.624 Sum_probs=57.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSG 62 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~ 62 (390)
|+++||.+|||+|||+||++||||+|+ ++.|.++|++|++||+|||||.+|+.||+||..+
T Consensus 12 v~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~ 72 (291)
T PRK14299 12 VPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTA 72 (291)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCcc
Confidence 579999999999999999999999998 6889999999999999999999999999999863
No 27
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.71 E-value=1.4e-17 Score=169.01 Aligned_cols=60 Identities=37% Similarity=0.534 Sum_probs=57.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKS 61 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~ 61 (390)
|+++||.+|||+|||+||++||||+|+ +++|.++|++|++||+||+||.+|+.||+||..
T Consensus 11 v~~~a~~~eik~ayr~la~~~hpD~~~-~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~ 70 (378)
T PRK14278 11 VSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDP 70 (378)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCC-cHHHHHHHHHHHHHHHHhchhhhhhhhhccCCc
Confidence 579999999999999999999999998 688999999999999999999999999999975
No 28
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.70 E-value=2e-17 Score=168.43 Aligned_cols=64 Identities=36% Similarity=0.591 Sum_probs=60.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHh----hCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDA----YGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~----~G~~~~~ 64 (390)
|+++||..|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|+.||+ ||..++.
T Consensus 17 v~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~ 84 (389)
T PRK14295 17 VPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFR 84 (389)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccc
Confidence 579999999999999999999999999888899999999999999999999999999 9987654
No 29
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.70 E-value=2.5e-17 Score=167.29 Aligned_cols=62 Identities=40% Similarity=0.629 Sum_probs=58.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGI 63 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~ 63 (390)
|+++||..|||+|||+||++||||+|+ ++.|.++|++|++||+|||||.+|+.||+||..++
T Consensus 11 v~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~ 72 (382)
T PRK14291 11 VSRNATQEEIKKAYRRLARKYHPDFNK-NPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAF 72 (382)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhcCHHHHHHHhhhccccc
Confidence 578999999999999999999999998 47899999999999999999999999999998764
No 30
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.70 E-value=3.2e-17 Score=165.91 Aligned_cols=64 Identities=41% Similarity=0.627 Sum_probs=60.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~ 64 (390)
|+++||..|||+|||+||++||||+|++++.|.++|++|++||+||+||.+|+.||+||..++.
T Consensus 12 v~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 75 (371)
T PRK10767 12 VSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFE 75 (371)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccc
Confidence 6799999999999999999999999998888999999999999999999999999999987654
No 31
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.69 E-value=2.2e-17 Score=167.46 Aligned_cols=63 Identities=37% Similarity=0.564 Sum_probs=59.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~ 64 (390)
|+++||..|||+|||+||++||||+|+ +++|.++|++|++||+|||||.+|+.||+||..++.
T Consensus 13 v~~~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~ 75 (378)
T PRK14283 13 VDRNADKKEIKKAYRKLARKYHPDVSE-EEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMD 75 (378)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccc
Confidence 679999999999999999999999998 588999999999999999999999999999987654
No 32
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.69 E-value=4.6e-17 Score=164.44 Aligned_cols=81 Identities=33% Similarity=0.519 Sum_probs=68.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCCCC--C--------cC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDP-LAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTE--A--------II 69 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~-~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~~~--~--------~~ 69 (390)
|+++||..|||+|||+||++||||+|++++ +|.++|++|++||+|||||.+|+.||.||..++... + +.
T Consensus 11 v~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~~~~~~~~~~~~~ 90 (365)
T PRK14290 11 VDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFNWDNFTHFS 90 (365)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCCCCcccccccccc
Confidence 578999999999999999999999998765 789999999999999999999999999998765311 0 23
Q ss_pred ChHHHhhhhhcC
Q 016408 70 DPAAIFAMLFGS 81 (390)
Q Consensus 70 dp~~~f~~~Fg~ 81 (390)
++.++|..|||+
T Consensus 91 ~~~d~f~~~fg~ 102 (365)
T PRK14290 91 DINDIFNQIFGG 102 (365)
T ss_pred chhHHHHHHhcC
Confidence 556777777764
No 33
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.68 E-value=3.4e-17 Score=156.12 Aligned_cols=63 Identities=38% Similarity=0.628 Sum_probs=60.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGI 63 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~ 63 (390)
|+++|+.++||||||+||++||||+|+++|++.++|++||.||+|||||.+|..||+||..++
T Consensus 39 l~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l 101 (279)
T KOG0716|consen 39 LPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGL 101 (279)
T ss_pred CCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHH
Confidence 688999999999999999999999999999999999999999999999999999999987764
No 34
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.67 E-value=8.9e-17 Score=164.04 Aligned_cols=64 Identities=36% Similarity=0.603 Sum_probs=60.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~ 64 (390)
|+++||..|||+|||+||++||||+|+++++|.++|++|++||+||+||.+|+.||+||..++.
T Consensus 11 v~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~ 74 (397)
T PRK14281 11 VSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVG 74 (397)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhc
Confidence 5799999999999999999999999998888999999999999999999999999999987654
No 35
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.67 E-value=1.1e-16 Score=160.87 Aligned_cols=63 Identities=38% Similarity=0.649 Sum_probs=59.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~ 64 (390)
|+++||.+|||+|||+||++||||+|+ +++|.++|++|++||+||+||.+|..||.||..+..
T Consensus 8 v~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~ 70 (354)
T TIGR02349 8 VSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFN 70 (354)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhhChHHHHhhhhccccccc
Confidence 578999999999999999999999998 678999999999999999999999999999987654
No 36
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.66 E-value=1.8e-16 Score=160.35 Aligned_cols=80 Identities=36% Similarity=0.511 Sum_probs=68.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCCC-------CC-cCChH
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIST-------EA-IIDPA 72 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~~-------~~-~~dp~ 72 (390)
|+++||.++||+|||+||++||||+|+ +++|.++|++|++||+||+||.+|+.||.||..+... .+ ..|+.
T Consensus 10 v~~~a~~~~ik~ayr~l~~~~hpD~~~-~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~~~~~~~~d~~ 88 (371)
T PRK14292 10 VSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGDPFGGMGFDPM 88 (371)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCC-ChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCcccCccCCChH
Confidence 579999999999999999999999998 6789999999999999999999999999999865211 01 13566
Q ss_pred HHhhhhhcC
Q 016408 73 AIFAMLFGS 81 (390)
Q Consensus 73 ~~f~~~Fg~ 81 (390)
++|..+||+
T Consensus 89 d~f~~~fg~ 97 (371)
T PRK14292 89 DIFEQLFGG 97 (371)
T ss_pred HHHHHhhCC
Confidence 788888875
No 37
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.65 E-value=3.2e-16 Score=159.41 Aligned_cols=64 Identities=39% Similarity=0.620 Sum_probs=60.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~ 64 (390)
|+++||.+|||+|||+||++||||+|+++++|.++|++|++||+||+||.+|+.||+||..++.
T Consensus 13 v~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~ 76 (386)
T PRK14289 13 VSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVG 76 (386)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccc
Confidence 5799999999999999999999999998889999999999999999999999999999987654
No 38
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.63 E-value=4.2e-16 Score=157.44 Aligned_cols=63 Identities=35% Similarity=0.494 Sum_probs=57.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPND-PLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGI 63 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~-~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~ 63 (390)
|.++|++.+||++||+|||+|||||||.. .+|.++|+.|+.||+|||||+.|++||.|..+.+
T Consensus 16 v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil 79 (508)
T KOG0717|consen 16 VERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQIL 79 (508)
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHh
Confidence 46899999999999999999999999855 3689999999999999999999999999987543
No 39
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.62 E-value=5.1e-16 Score=152.14 Aligned_cols=79 Identities=35% Similarity=0.513 Sum_probs=70.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCCCCCcCChHHHhhhhhc
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFG 80 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~~~~~~dp~~~f~~~Fg 80 (390)
++++||..|||+||++||++||||.|. +.+|.++|++|.+||+||+|+++|..||.+|..+ .....++|...|..+|+
T Consensus 51 v~~~At~~EIK~Af~~LaKkyHPD~n~-~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~-~~~~~g~~~~~~~~~~~ 128 (288)
T KOG0715|consen 51 VSRNATLSEIKSAFRKLAKKYHPDVNK-DKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ-HGEFGGNPFDVFLEFFG 128 (288)
T ss_pred cCCCCCHHHHHHHHHHHHHhhCCCCCC-CcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc-cccccCCccchHHHhhc
Confidence 578999999999999999999999998 4599999999999999999999999999999876 22234478888888888
Q ss_pred C
Q 016408 81 S 81 (390)
Q Consensus 81 ~ 81 (390)
+
T Consensus 129 ~ 129 (288)
T KOG0715|consen 129 G 129 (288)
T ss_pred c
Confidence 7
No 40
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.62 E-value=6.3e-16 Score=156.59 Aligned_cols=63 Identities=27% Similarity=0.436 Sum_probs=58.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~ 64 (390)
|+++||..|||+|||++|++||||+|+ ++.|+++|++|++||+||+||.+|+.||+||..++.
T Consensus 11 v~~~as~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~ 73 (372)
T PRK14300 11 VSKTASQADLKKAYLKLAKQYHPDTTD-AKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQ 73 (372)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccccc
Confidence 578999999999999999999999998 577899999999999999999999999999987654
No 41
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.62 E-value=9.2e-16 Score=155.48 Aligned_cols=63 Identities=38% Similarity=0.647 Sum_probs=58.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIS 64 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~ 64 (390)
|+++||..|||+|||+||++||||+|+ ++.|.++|++|++||+||+||.+|+.||.||..++.
T Consensus 11 v~~~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~ 73 (374)
T PRK14293 11 VSRDADKDELKRAYRRLARKYHPDVNK-EPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVS 73 (374)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCC-CcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccc
Confidence 578999999999999999999999998 578999999999999999999999999999987654
No 42
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.61 E-value=1.5e-15 Score=150.13 Aligned_cols=60 Identities=33% Similarity=0.434 Sum_probs=56.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKS 61 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~ 61 (390)
|+++||.+|||+|||+||++||||+|+ ++.|.++|++|++||+||+||.+|+.||.||..
T Consensus 12 v~~~a~~~eik~ayr~la~k~HPD~~~-~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~ 71 (306)
T PRK10266 12 VKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQH 71 (306)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhhhHHHHHHHHHhhcc
Confidence 578999999999999999999999997 578999999999999999999999999999853
No 43
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.55 E-value=2.9e-14 Score=133.49 Aligned_cols=61 Identities=36% Similarity=0.480 Sum_probs=55.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCC--CChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCC
Q 016408 2 LSEVEPLQITFACGFQARKVHPDKNP--NDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSG 62 (390)
Q Consensus 2 ~~~As~~eIKkAYrklAlk~HPDKn~--~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~ 62 (390)
-++||..+||||||+||++||||+++ ...+|..+|+.|+.||+||||.++|+.||..|.-.
T Consensus 23 er~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~id 85 (264)
T KOG0719|consen 23 ERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSID 85 (264)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCC
Confidence 47899999999999999999999995 33568999999999999999999999999988654
No 44
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.50 E-value=4e-14 Score=107.80 Aligned_cols=56 Identities=36% Similarity=0.598 Sum_probs=52.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHhcCChhHHHHHH
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDP-LAAQNFQVLGEAYQVLSDPAQRQAYD 56 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~-~A~~kF~~I~eAYqVLsDp~~R~~YD 56 (390)
|+++++..+||++|+++++++|||+++++. .+.+.|..|++||++|+||.+|+.||
T Consensus 8 l~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 8 LPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp STTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 578999999999999999999999998766 68899999999999999999999998
No 45
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.47 E-value=9.5e-14 Score=148.18 Aligned_cols=64 Identities=38% Similarity=0.588 Sum_probs=59.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIST 65 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~~ 65 (390)
|+++|+..+||+|||+||++||||++++ +.+.++|++|++||+||+||.+|+.||.||..+...
T Consensus 10 Vs~dAS~eEIKKAYRKLAKKyHPDKn~~-~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~d~ 73 (871)
T TIGR03835 10 IDRDADEQEIKKAFRKLAKKYHPDRNKA-PDAASIFAEINEANDVLSNPKKRANYDKYGHDGVDR 73 (871)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCCHHHHHHHhhhccccccc
Confidence 5789999999999999999999999985 788999999999999999999999999999887643
No 46
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.42 E-value=2.9e-13 Score=123.32 Aligned_cols=59 Identities=41% Similarity=0.652 Sum_probs=56.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChH-HHHHHHHHHHHHHhcCChhHHHHHHhhC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPL-AAQNFQVLGEAYQVLSDPAQRQAYDAYG 59 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~-A~~kF~~I~eAYqVLsDp~~R~~YD~~G 59 (390)
|+++|+..|||+|||++|++||||+|++++. |.++|+.|++||+||+|+.+|..||+.+
T Consensus 14 v~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~ 73 (237)
T COG2214 14 VPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG 73 (237)
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence 5789999999999999999999999998885 9999999999999999999999999984
No 47
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.34 E-value=1.9e-12 Score=120.29 Aligned_cols=65 Identities=26% Similarity=0.413 Sum_probs=58.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIST 65 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~~ 65 (390)
|.++||..|||||||+|.++|||||+|...+-++.|..|++|||.|+|+..|+.|.+||....++
T Consensus 107 l~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDGpq 171 (230)
T KOG0721|consen 107 LDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDGPQ 171 (230)
T ss_pred CCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCCcc
Confidence 57999999999999999999999999854556788999999999999999999999999875443
No 48
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.30 E-value=4.3e-12 Score=95.05 Aligned_cols=50 Identities=40% Similarity=0.529 Sum_probs=46.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCC-ChHHHHHHHHHHHHHHhcCChh
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPN-DPLAAQNFQVLGEAYQVLSDPA 50 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~-~~~A~~kF~~I~eAYqVLsDp~ 50 (390)
|+++++..+||+||++++++||||++++ .+.+.+.|+.|++||++|+||.
T Consensus 9 l~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 9 VPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence 5788999999999999999999999986 5678899999999999999985
No 49
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.30 E-value=2.8e-12 Score=122.40 Aligned_cols=80 Identities=38% Similarity=0.603 Sum_probs=64.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCCCC-------------
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPND-PLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTE------------- 66 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~-~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~~~------------- 66 (390)
|.++|+..+|++|||++|++||||+|++. ..|..+|++|++||+||+|+.+|..||.+|.++....
T Consensus 11 i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~~~~~~~~~~~ 90 (306)
T KOG0714|consen 11 IARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSFSSSFTSELFY 90 (306)
T ss_pred ccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCCCCCCCCCcce
Confidence 45789999999999999999999999865 2455699999999999999999999999997654431
Q ss_pred -CcCChHHHhhhhhc
Q 016408 67 -AIIDPAAIFAMLFG 80 (390)
Q Consensus 67 -~~~dp~~~f~~~Fg 80 (390)
...+|...|.++||
T Consensus 91 ~~~~~~~~~~~~~~g 105 (306)
T KOG0714|consen 91 FLFRKPDKDFYEFFG 105 (306)
T ss_pred eccCchhhhHHHHhC
Confidence 22345566666666
No 50
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.26 E-value=1.2e-11 Score=90.88 Aligned_cols=48 Identities=44% Similarity=0.619 Sum_probs=44.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSD 48 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsD 48 (390)
|++++|..+||++||+++++||||++++...+.+.|+.|++||++|+|
T Consensus 8 l~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 8 VPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999998556789999999999999997
No 51
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.21 E-value=9.2e-12 Score=123.07 Aligned_cols=60 Identities=32% Similarity=0.452 Sum_probs=53.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---HHHHHHHHHHHHHHhcCChhHHHHHHhhCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDP---LAAQNFQVLGEAYQVLSDPAQRQAYDAYGKS 61 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~---~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~ 61 (390)
+.|+|+..||.||||++|.+||||...+.. .|+++|..|..|-+|||||++|+.||. |..
T Consensus 402 VkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDn-GeD 464 (504)
T KOG0624|consen 402 VKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDN-GED 464 (504)
T ss_pred hcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccC-CCC
Confidence 468999999999999999999999887544 388999999999999999999999998 444
No 52
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.21 E-value=4.6e-10 Score=102.63 Aligned_cols=53 Identities=34% Similarity=0.452 Sum_probs=48.1
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHhcCChhHHHHHHh
Q 016408 5 VEPLQITFACGFQARKVHPDKNPNDPL-----AAQNFQVLGEAYQVLSDPAQRQAYDA 57 (390)
Q Consensus 5 As~~eIKkAYrklAlk~HPDKn~~~~~-----A~~kF~~I~eAYqVLsDp~~R~~YD~ 57 (390)
.+..+|+++||+++++||||++.+.++ +.++|..|++||+||+||.+|+.|+-
T Consensus 18 id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL 75 (173)
T PRK00294 18 LDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL 75 (173)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence 678999999999999999999976654 56789999999999999999999994
No 53
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.20 E-value=1.5e-11 Score=123.71 Aligned_cols=78 Identities=33% Similarity=0.380 Sum_probs=66.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHhcCChhHHHHHHhhCCC--CCCCCCcCChHHHhhh
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPND-PLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKS--GISTEAIIDPAAIFAM 77 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~-~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~--~~~~~~~~dp~~~f~~ 77 (390)
|.++||..|||||||++|+.||||+|.++ .+|+.+|+++++||.||+||.+|..||..-.- ...+++.+||..+|..
T Consensus 381 i~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg~dle~~~~~~a~~dp~~~~~a 460 (486)
T KOG0550|consen 381 ISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSGQDLEEVGSGGAGFDPFNIFRA 460 (486)
T ss_pred hhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccccchhhhcCCCcCcChhhhhhh
Confidence 46899999999999999999999999988 78999999999999999999999999984221 2223366788888877
Q ss_pred h
Q 016408 78 L 78 (390)
Q Consensus 78 ~ 78 (390)
+
T Consensus 461 ~ 461 (486)
T KOG0550|consen 461 F 461 (486)
T ss_pred c
Confidence 6
No 54
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.20 E-value=3.2e-10 Score=103.52 Aligned_cols=54 Identities=28% Similarity=0.409 Sum_probs=48.1
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHhcCChhHHHHHHh
Q 016408 4 EVEPLQITFACGFQARKVHPDKNPNDPL-----AAQNFQVLGEAYQVLSDPAQRQAYDA 57 (390)
Q Consensus 4 ~As~~eIKkAYrklAlk~HPDKn~~~~~-----A~~kF~~I~eAYqVLsDp~~R~~YD~ 57 (390)
+++..+|+++||+++++||||++++.+. |.++|..|++||++|+||.+|+.|+-
T Consensus 14 ~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll 72 (171)
T PRK05014 14 DIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL 72 (171)
T ss_pred CCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence 4788999999999999999999875543 56799999999999999999999984
No 55
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.16 E-value=8.9e-10 Score=101.03 Aligned_cols=58 Identities=29% Similarity=0.322 Sum_probs=49.7
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCChHHH-----HHHHHHHHHHHhcCChhHHHHHHh--hCCC
Q 016408 4 EVEPLQITFACGFQARKVHPDKNPNDPLAA-----QNFQVLGEAYQVLSDPAQRQAYDA--YGKS 61 (390)
Q Consensus 4 ~As~~eIKkAYrklAlk~HPDKn~~~~~A~-----~kF~~I~eAYqVLsDp~~R~~YD~--~G~~ 61 (390)
+++..+|+++||+++++||||++++.+++. +.+..||+||++|+||.+|..|.- +|..
T Consensus 19 ~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l~G~~ 83 (176)
T PRK03578 19 ALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHLRGVD 83 (176)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHhcCCC
Confidence 468999999999999999999998666544 456899999999999999999984 5554
No 56
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.07 E-value=2.6e-10 Score=103.56 Aligned_cols=55 Identities=22% Similarity=0.169 Sum_probs=47.4
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCChH---HHHHHHHHHHHHHhcCChhHHHHHHhh
Q 016408 4 EVEPLQITFACGFQARKVHPDKNPNDPL---AAQNFQVLGEAYQVLSDPAQRQAYDAY 58 (390)
Q Consensus 4 ~As~~eIKkAYrklAlk~HPDKn~~~~~---A~~kF~~I~eAYqVLsDp~~R~~YD~~ 58 (390)
+++..+|+++||+++++||||++++..+ +...|..|++||+||+||.+|+.|+..
T Consensus 15 ~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~ 72 (166)
T PRK01356 15 NIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLL 72 (166)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3789999999999999999999975332 335688999999999999999999753
No 57
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.00 E-value=2.7e-10 Score=108.23 Aligned_cols=57 Identities=33% Similarity=0.496 Sum_probs=53.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhh
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAY 58 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~ 58 (390)
+.++|+..||.||||+||++||||+|+ ++++.+.|..|..||++|.|.+.|..||-.
T Consensus 41 V~Rea~KseIakAYRqLARrhHPDr~r-~~e~k~~F~~iAtayeilkd~e~rt~ydya 97 (329)
T KOG0722|consen 41 VAREANKSEIAKAYRQLARRHHPDRNR-DPESKKLFVKIATAYEILKDNETRTQYDYA 97 (329)
T ss_pred hhhhccHHHHHHHHHHHHHHhCCcccC-CchhhhhhhhhhcccccccchhhHHhHHHH
Confidence 468899999999999999999999998 688889999999999999999999999974
No 58
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.99 E-value=7.9e-10 Score=99.60 Aligned_cols=55 Identities=29% Similarity=0.419 Sum_probs=47.8
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCh-----HHHHHHHHHHHHHHhcCChhHHHHHHhh
Q 016408 4 EVEPLQITFACGFQARKVHPDKNPNDP-----LAAQNFQVLGEAYQVLSDPAQRQAYDAY 58 (390)
Q Consensus 4 ~As~~eIKkAYrklAlk~HPDKn~~~~-----~A~~kF~~I~eAYqVLsDp~~R~~YD~~ 58 (390)
+.+..+|+++||+++++||||+.++.. .+...|..|++||++|+||.+|+.|.-.
T Consensus 2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~ 61 (157)
T TIGR00714 2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLS 61 (157)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHH
Confidence 357889999999999999999976443 2668999999999999999999999864
No 59
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.95 E-value=7.5e-10 Score=112.63 Aligned_cols=57 Identities=32% Similarity=0.446 Sum_probs=54.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhh
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAY 58 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~ 58 (390)
+++++|+++|||.|||+|...|||||. .+.|++.|+.+.-||+||+|+++|..||.-
T Consensus 243 l~~d~sd~~lKk~Yrk~A~LVhPDKn~-~~~A~Eafk~Lq~Afevig~~~kR~eYd~e 299 (490)
T KOG0720|consen 243 LPSDCSDADLKKNYRKKAMLVHPDKNM-IPRAEEAFKKLQVAFEVIGDSVKRKEYDLE 299 (490)
T ss_pred CCCCCCHHHHHHHHHhhceEeCCCccC-ChhHHHHHHHHHHHHHHhcchhhhhHHHHH
Confidence 468999999999999999999999998 789999999999999999999999999973
No 60
>PHA02624 large T antigen; Provisional
Probab=98.92 E-value=2.1e-09 Score=114.06 Aligned_cols=75 Identities=16% Similarity=0.154 Sum_probs=56.9
Q ss_pred CCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHH--HhhCCCCCCCCCcCChHHHhh
Q 016408 1 MLSEV--EPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAY--DAYGKSGISTEAIIDPAAIFA 76 (390)
Q Consensus 1 ~~~~A--s~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~Y--D~~G~~~~~~~~~~dp~~~f~ 76 (390)
|+++| +..+||+|||++|++|||||+. + .++|++|++||++|+|+.+|..| |..-..++...+..+-.+.+.
T Consensus 19 L~~~A~gs~~eIKkAYRkLAkkyHPDKgG-d---eekfk~Ln~AYevL~d~~k~~r~~fd~~~~~~v~~~~~~~w~~ww~ 94 (647)
T PHA02624 19 LPMAAWGNLPLMRKAYLRKCKEYHPDKGG-D---EEKMKRLNSLYKKLQEGVKSARQSFGTQDSSEIPTYGTPEWEQWWE 94 (647)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCcCCCC-c---HHHHHHHHHHHHHHhcHHHhhhcccccccccCCCCCccccHHHHHH
Confidence 57899 9999999999999999999974 3 47999999999999999999999 433112333333334444555
Q ss_pred hhh
Q 016408 77 MLF 79 (390)
Q Consensus 77 ~~F 79 (390)
.+|
T Consensus 95 ~f~ 97 (647)
T PHA02624 95 EFN 97 (647)
T ss_pred Hhh
Confidence 554
No 61
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=98.76 E-value=1.1e-08 Score=87.53 Aligned_cols=43 Identities=19% Similarity=0.109 Sum_probs=38.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLS 47 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLs 47 (390)
|.++||.+|||++||++++++|||++. + .+.|++|++||++|.
T Consensus 73 v~~~As~~eIkkaYRrLa~~~HPDkgG-s---~~~~~kIneAyevL~ 115 (116)
T PTZ00100 73 ISPTASKERIREAHKQLMLRNHPDNGG-S---TYIASKVNEAKDLLL 115 (116)
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHHh
Confidence 578999999999999999999999863 3 468899999999985
No 62
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=98.51 E-value=1.3e-07 Score=96.22 Aligned_cols=65 Identities=23% Similarity=0.432 Sum_probs=57.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCC---C--hHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCCCCC
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPN---D--PLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIST 65 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~---~--~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~~~~ 65 (390)
|..++|..+||++||+|..|+||||-++ + .+.+++.+.|++||..|+|...|+.|=.||....++
T Consensus 106 I~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~pQ 175 (610)
T COG5407 106 IDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDSPQ 175 (610)
T ss_pred ccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCCCc
Confidence 5678999999999999999999999875 2 356799999999999999999999999999876553
No 63
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.40 E-value=4.6e-07 Score=83.79 Aligned_cols=55 Identities=31% Similarity=0.440 Sum_probs=50.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHhcCChhHHHHH
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPND-PLAAQNFQVLGEAYQVLSDPAQRQAY 55 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~-~~A~~kF~~I~eAYqVLsDp~~R~~Y 55 (390)
|.|+.+.++||+.||+|++..||||||+| +.|...|-.+..||.+|-|+..|..-
T Consensus 61 Idpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~ 116 (250)
T KOG1150|consen 61 IDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRC 116 (250)
T ss_pred cCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 67899999999999999999999999988 56999999999999999999866543
No 64
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=98.39 E-value=7.1e-07 Score=81.75 Aligned_cols=52 Identities=23% Similarity=0.270 Sum_probs=45.6
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHhcCChhHHHHHH
Q 016408 5 VEPLQITFACGFQARKVHPDKNPNDPL-----AAQNFQVLGEAYQVLSDPAQRQAYD 56 (390)
Q Consensus 5 As~~eIKkAYrklAlk~HPDKn~~~~~-----A~~kF~~I~eAYqVLsDp~~R~~YD 56 (390)
.+...+++.||.+.+++|||+..+.+. |.+.-..||+||++|+||-+|+.|=
T Consensus 16 iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YL 72 (173)
T PRK01773 16 LDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAI 72 (173)
T ss_pred CCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHH
Confidence 688999999999999999999876543 4456789999999999999999993
No 65
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.33 E-value=1e-06 Score=84.87 Aligned_cols=73 Identities=27% Similarity=0.369 Sum_probs=57.6
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCC--CCChHHHHHHHHHHHHHHhcCChhHHHHHHhhCCCC-CCCCCcCChHHHhh
Q 016408 4 EVEPLQITFACGFQARKVHPDKN--PNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSG-ISTEAIIDPAAIFA 76 (390)
Q Consensus 4 ~As~~eIKkAYrklAlk~HPDKn--~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G~~~-~~~~~~~dp~~~f~ 76 (390)
-|++.+|.+|-++...+||||+. .++.....-|+.|+.||+||+|+.+|..||...... ++..-...|.+||.
T Consensus 57 ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~df~advppp~~~t~~~Ffe 132 (379)
T COG5269 57 KAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSNDFDADVPPPRIYTPDEFFE 132 (379)
T ss_pred CCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccccccccCCCCccCCCchhHHH
Confidence 47889999999999999999997 344566789999999999999999999999865442 33333445555554
No 66
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.03 E-value=4.8e-06 Score=91.82 Aligned_cols=38 Identities=39% Similarity=0.547 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcC
Q 016408 7 PLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLS 47 (390)
Q Consensus 7 ~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLs 47 (390)
.+.||++|||||.+||||||| +..++|.++++||+.|+
T Consensus 1299 ~~KirrqY~kLA~kYHPDKNP---EGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1299 PAKIRRQYYKLAAKYHPDKNP---EGREMFERVNKAYELLS 1336 (2235)
T ss_pred HHHHHHHHHHHHHHhCCCCCc---hHHHHHHHHHHHHHHHH
Confidence 478999999999999999997 67899999999999998
No 67
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=97.36 E-value=0.00015 Score=70.81 Aligned_cols=36 Identities=17% Similarity=0.059 Sum_probs=29.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHH
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQ 37 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~ 37 (390)
|.++||.+|||+|||+|+++||||++.+ ....+.+.
T Consensus 208 v~~~as~~eIk~aYr~L~~~~HPDk~~~-~g~~~~~~ 243 (267)
T PRK09430 208 VSESDDDQEIKRAYRKLMSEHHPDKLVA-KGLPPEMM 243 (267)
T ss_pred CCCCCCHHHHHHHHHHHHHHhCcCCCCC-CCCChhhH
Confidence 5789999999999999999999999974 33334443
No 68
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=96.48 E-value=0.0036 Score=59.53 Aligned_cols=45 Identities=27% Similarity=0.409 Sum_probs=39.0
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHH-hcCC
Q 016408 3 SEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQ-VLSD 48 (390)
Q Consensus 3 ~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYq-VLsD 48 (390)
.+|+..+++.||..||+++|||-.. +....++|++|.+||. ||+.
T Consensus 57 e~~~adevr~af~~lakq~hpdsgs-~~adaa~f~qideafrkvlq~ 102 (342)
T KOG0568|consen 57 EGADADEVREAFHDLAKQVHPDSGS-EEADAARFIQIDEAFRKVLQE 102 (342)
T ss_pred ccCchhHHHHHHHHHHHHcCCCCCC-ccccHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999876 4445689999999998 8874
No 69
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=94.04 E-value=0.062 Score=49.16 Aligned_cols=51 Identities=27% Similarity=0.287 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHhcCChhHHHHHHh
Q 016408 7 PLQITFACGFQARKVHPDKNPNDPL-----AAQNFQVLGEAYQVLSDPAQRQAYDA 57 (390)
Q Consensus 7 ~~eIKkAYrklAlk~HPDKn~~~~~-----A~~kF~~I~eAYqVLsDp~~R~~YD~ 57 (390)
...++..|+.+.+.+|||+....+. +.+.+..++.||++|-||-+|..|=.
T Consensus 17 ~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~l 72 (174)
T COG1076 17 LDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLL 72 (174)
T ss_pred HhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 3567889999999999999865443 34689999999999999999999854
No 70
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=93.37 E-value=0.15 Score=43.17 Aligned_cols=45 Identities=22% Similarity=0.252 Sum_probs=37.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCCh
Q 016408 1 MLSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDP 49 (390)
Q Consensus 1 ~~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp 49 (390)
+.+.++...||.|.|+.-+-.|||+.. .|=.. .+|+||+.+|...
T Consensus 64 v~~s~~k~KikeaHrriM~~NHPD~GG-SPYlA---sKINEAKdlLe~~ 108 (112)
T KOG0723|consen 64 VTPSLDKDKIKEAHRRIMLANHPDRGG-SPYLA---SKINEAKDLLEGT 108 (112)
T ss_pred CCccccHHHHHHHHHHHHHcCCCcCCC-CHHHH---HHHHHHHHHHhcc
Confidence 468899999999999999999999985 55322 3599999999753
No 71
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=93.25 E-value=0.34 Score=43.78 Aligned_cols=68 Identities=29% Similarity=0.406 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCC----Ch-HHHHHHHHHHHHHHhcCChhHHHHHH--hhCCCCCCCCCcCChHHH
Q 016408 7 PLQITFACGFQARKVHPDKNPN----DP-LAAQNFQVLGEAYQVLSDPAQRQAYD--AYGKSGISTEAIIDPAAI 74 (390)
Q Consensus 7 ~~eIKkAYrklAlk~HPDKn~~----~~-~A~~kF~~I~eAYqVLsDp~~R~~YD--~~G~~~~~~~~~~dp~~~ 74 (390)
+.-++--|--...+.|||+... ++ .|.+...++++||..|.||-.|+.|= ..|.+.....-..||.-+
T Consensus 24 p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilkl~g~e~~sne~stDpe~L 98 (168)
T KOG3192|consen 24 PDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLKLKGQEQTSNELSTDPEFL 98 (168)
T ss_pred cchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCchhhhccCHHHH
Confidence 3344446777888999998421 12 47788999999999999999999994 466555444434466543
No 72
>KOG0917 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.28 E-value=25 Score=34.78 Aligned_cols=91 Identities=18% Similarity=0.147 Sum_probs=52.9
Q ss_pred HHHHHH-HhHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCCCcccccccccccCCC--CCCC
Q 016408 253 IDSLWK-LNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGKIFQRAKSNNGSEGETVLSGGVHKLNGS--DSCY 329 (390)
Q Consensus 253 L~alW~-~~~~DIe~Tlr~VC~kVL~D~~V~~e~R~kRA~AL~~LG~if~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~ 329 (390)
+.+... ..++||-++.-+ |+.+-...|-.|-+.-..|+.-.+ +|++..-..-.+..+|+ ..++
T Consensus 109 vkaFYtA~~~~dILs~FGe----------l~e~~l~~rKYAkWKat~I~~clk----~G~~p~Pg~~~deD~d~di~~~~ 174 (338)
T KOG0917|consen 109 VKAFYTASLLIDILSVFGE----------LTEENLKHRKYAKWKATYIHNCLK----NGETPQPGPVGDEDDDNDIEENE 174 (338)
T ss_pred HHHHHHHHHHHHHHHHhcC----------CChHHHhhhHHhHHHHHHHHHHHh----CCCCCCCCCCCCcccccccCccc
Confidence 444433 345677666543 667777889999999999997765 55555443323222222 1222
Q ss_pred CCCCCCCCCCCccccccccCCCCCCCCcc
Q 016408 330 DASSPITSPKSTEHQESSQSAFASQSPYV 358 (390)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (390)
+ .+.+++|.++-+...+|..++..+||+
T Consensus 175 ~-~s~d~~P~~tGp~~~syp~Py~p~p~~ 202 (338)
T KOG0917|consen 175 D-ASADSLPTQTGPTQPSYPSPYDPSPYH 202 (338)
T ss_pred c-ccCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence 3 356677766556666777644444443
No 73
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=82.65 E-value=1.2 Score=44.64 Aligned_cols=56 Identities=21% Similarity=0.319 Sum_probs=44.6
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCC----ChHHHHHHHHHHHHHHhcCChhHHHHHHhhC
Q 016408 4 EVEPLQITFACGFQARKVHPDKNPN----DPLAAQNFQVLGEAYQVLSDPAQRQAYDAYG 59 (390)
Q Consensus 4 ~As~~eIKkAYrklAlk~HPDKn~~----~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~G 59 (390)
-++..+|..+|+..++.+||++-.. ...-.+-|++|.+||.||++...|...|.+-
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~~ 62 (335)
T KOG0724|consen 3 LASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSWD 62 (335)
T ss_pred cccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhhh
Confidence 3678899999999999999998741 1234577999999999999977766666654
No 74
>PF03207 OspD: Borrelia outer surface protein D (OspD); InterPro: IPR004894 This is a family of outer surface proteins from Borrelia. The function of these proteins is unknown.
Probab=60.32 E-value=55 Score=30.18 Aligned_cols=30 Identities=17% Similarity=0.397 Sum_probs=25.0
Q ss_pred HHHHHHHHHh------HHHHHHHHHHHHHHhhcCCC
Q 016408 251 LMIDSLWKLN------VADIEATLSRVCQMVLQDNN 280 (390)
Q Consensus 251 ~iL~alW~~~------~~DIe~Tlr~VC~kVL~D~~ 280 (390)
..++.+|+.+ ++|||+||++.-+++-.+..
T Consensus 187 eaveiawkatv~akd~lidve~~vke~ldkiktet~ 222 (254)
T PF03207_consen 187 EAVEIAWKATVEAKDKLIDVENTVKETLDKIKTETT 222 (254)
T ss_pred HHHHHHHHHHhhhhhhHhhHHHHHHHHHHHHhhhcc
Confidence 4578899887 48999999999999977653
No 75
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=59.75 E-value=19 Score=30.82 Aligned_cols=46 Identities=17% Similarity=0.179 Sum_probs=33.5
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCChHHH----HHHHHHHHHHHhcCC
Q 016408 3 SEVEPLQITFACGFQARKVHPDKNPNDPLAA----QNFQVLGEAYQVLSD 48 (390)
Q Consensus 3 ~~As~~eIKkAYrklAlk~HPDKn~~~~~A~----~kF~~I~eAYqVLsD 48 (390)
+..+..+++.|.|..-++.|||.....|++. +-++.++.--+.|..
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~ 53 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKK 53 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhc
Confidence 4567789999999999999999876666532 345666655555543
No 76
>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=50.62 E-value=1.5e+02 Score=30.98 Aligned_cols=63 Identities=19% Similarity=0.151 Sum_probs=47.8
Q ss_pred CCHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHH
Q 016408 236 YTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELRARAKALKTLGK 298 (390)
Q Consensus 236 ~~eee~~~~~~~~~~~iL~alW~~~~~DIe~Tlr~VC~kVL~D~~V~~e~R~kRA~AL~~LG~ 298 (390)
.++++..+........-|+.+..-.+++=-.-.-+-|.+||.=..=..+-+.+|++||..||.
T Consensus 244 ~~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~Ai~~c~kvLe~~~~N~KALyRrG~A~l~~~e 306 (397)
T KOG0543|consen 244 FDEEEQKKAEALKLACHLNLAACYLKLKEYKEAIESCNKVLELDPNNVKALYRRGQALLALGE 306 (397)
T ss_pred CCHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHHHHHHHHHHhcCCCchhHHHHHHHHHHhhcc
Confidence 344555555555555666666666666666678889999999888889999999999999985
No 77
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=49.38 E-value=33 Score=32.15 Aligned_cols=38 Identities=13% Similarity=0.099 Sum_probs=29.0
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcC
Q 016408 2 LSEVEPLQITFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLS 47 (390)
Q Consensus 2 ~~~As~~eIKkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLs 47 (390)
+++||-+||.+|+.++-.+|- +|+ +.-.+|-.||+.+-
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~-----gd~---~~~~~IEaAYD~IL 38 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYA-----GDE---KSREAIEAAYDAIL 38 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhc-----CCH---HHHHHHHHHHHHHH
Confidence 589999999999999999882 233 34456889998443
No 78
>PF04719 TAFII28: hTAFII28-like protein conserved region; InterPro: IPR006809 The general transcription factor, TFIID, consists of the TATA-binding protein (TBP) associated with a series of TBP-associated factors (TAFs) that together participate in the assembly of the transcription preinitiation complex. The conserved region is found at the C terminus of most member proteins. The crystal structure of hTAFII28 with hTAFII18 shows that this region is involved in the binding of these two subunits. The conserved region contains four alpha helices and three loops arranged as in histone H3 [, ].; GO: 0006367 transcription initiation from RNA polymerase II promoter, 0005634 nucleus; PDB: 1BH9_B 1BH8_B.
Probab=42.08 E-value=1.1e+02 Score=25.28 Aligned_cols=58 Identities=21% Similarity=0.383 Sum_probs=30.6
Q ss_pred CCCHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCHHHHH-HHHHHHHHHHHHHHhc
Q 016408 235 NYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNAKKEELR-ARAKALKTLGKIFQRA 303 (390)
Q Consensus 235 ~~~eee~~~~~~~~~~~iL~alW~~~~~DIe~Tlr~VC~kVL~D~~V~~e~R~-kRA~AL~~LG~if~~~ 303 (390)
+.+++++..|+ .|+-+.+. -.+||++|..|+.+.+|+..... -++-|=.++|+|...+
T Consensus 7 ~f~~eQ~~Rye----------~fRRs~~~-k~~ikkli~~~~~~qsv~~~v~i~v~g~aKvFVGEiVE~A 65 (90)
T PF04719_consen 7 NFDEEQLDRYE----------AFRRSSFN-KAAIKKLINQVLGNQSVSQNVVIAVAGIAKVFVGEIVEEA 65 (90)
T ss_dssp ---HHHHHHHH----------HHHH-----HHHHHHHHHHHHS-S---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHH----------HHHHccCC-HHHHHHHHHHHcCCCCCChhHHHHHHHHHHHHHHHHHHHH
Confidence 34666666654 34444433 34899999999998999988764 3444445666666554
No 79
>COG1698 Uncharacterized protein conserved in archaea [Function unknown]
Probab=39.05 E-value=65 Score=26.69 Aligned_cols=34 Identities=26% Similarity=0.389 Sum_probs=25.1
Q ss_pred HHHHHHHHHH---HHhhcCCCCCHHHHHHHHHHHHHH
Q 016408 263 DIEATLSRVC---QMVLQDNNAKKEELRARAKALKTL 296 (390)
Q Consensus 263 DIe~Tlr~VC---~kVL~D~~V~~e~R~kRA~AL~~L 296 (390)
|-+.++++|| +.|.+|.+||...|+.-.+|.-.|
T Consensus 10 d~~e~i~q~~~lL~~Ii~DttVPRNIRraA~~a~e~L 46 (93)
T COG1698 10 DSEEKINQVMQLLDEIIQDTTVPRNIRRAAEEAKEAL 46 (93)
T ss_pred hhHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHH
Confidence 4444455544 347899999999999888887765
No 80
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=26.73 E-value=67 Score=20.77 Aligned_cols=17 Identities=12% Similarity=-0.130 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHhCC
Q 016408 7 PLQITFACGFQARKVHP 23 (390)
Q Consensus 7 ~~eIKkAYrklAlk~HP 23 (390)
.++.|.+.|+.|+.||-
T Consensus 10 ~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYHE 26 (28)
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 46788899999999994
No 81
>PF14891 Peptidase_M91: Effector protein
Probab=26.13 E-value=79 Score=28.66 Aligned_cols=31 Identities=26% Similarity=0.526 Sum_probs=28.2
Q ss_pred ccCChHHHHHHHHHHHHHHhhccchHHHHHHH
Q 016408 140 VQGNKEDFINYAEAEVSRLSNAAYGVDMLNTI 171 (390)
Q Consensus 140 v~g~~~~f~~~~~~Ea~~L~~~sFG~~iL~~I 171 (390)
|.|. ++|++.++.-+..|..++-|..||..|
T Consensus 7 ~~Gs-d~F~~rv~~~L~~i~ssptG~~mL~~l 37 (174)
T PF14891_consen 7 VEGS-DEFKQRVEAALDMIRSSPTGQQMLREL 37 (174)
T ss_pred ecCC-HHHHHHHHHHHHHHhcCchHHHHHHHH
Confidence 4566 489999999999999999999999999
No 82
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=24.46 E-value=1.8e+02 Score=20.84 Aligned_cols=41 Identities=15% Similarity=0.259 Sum_probs=29.8
Q ss_pred HHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHh
Q 016408 12 FACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDA 57 (390)
Q Consensus 12 kAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~ 57 (390)
+.++...+.-||+.+. .+..+.|++.+..|++.++...++.
T Consensus 13 ~~~~~~~~~~~~~~~~-----~~i~~~~~~~W~~l~~~~k~~y~~~ 53 (66)
T cd00084 13 QEHRAEVKAENPGLSV-----GEISKILGEMWKSLSEEEKKKYEEK 53 (66)
T ss_pred HHHHHHHHHHCcCCCH-----HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4566667778888443 4678889999999998776655554
No 83
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=23.71 E-value=49 Score=17.75 Aligned_cols=13 Identities=38% Similarity=0.667 Sum_probs=10.2
Q ss_pred HHHHHHHHHHhcC
Q 016408 35 NFQVLGEAYQVLS 47 (390)
Q Consensus 35 kF~~I~eAYqVLs 47 (390)
+|..+..||+-|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 5788888988774
No 84
>cd01389 MATA_HMG-box MATA_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include the fungal mating type gene products MC, MATA1 and Ste11.
Probab=21.42 E-value=1.7e+02 Score=22.54 Aligned_cols=42 Identities=10% Similarity=0.066 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHh
Q 016408 11 TFACGFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDA 57 (390)
Q Consensus 11 KkAYrklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~ 57 (390)
.+.+|...+.-||+... .+..+.|++.+..|++.++...++.
T Consensus 13 ~~~~r~~~~~~~p~~~~-----~eisk~~g~~Wk~ls~eeK~~y~~~ 54 (77)
T cd01389 13 RQDKHAQLKTENPGLTN-----NEISRIIGRMWRSESPEVKAYYKEL 54 (77)
T ss_pred HHHHHHHHHHHCCCCCH-----HHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 35667778888998653 4677889999999997776554444
No 85
>PRK04330 hypothetical protein; Provisional
Probab=21.35 E-value=1.8e+02 Score=23.92 Aligned_cols=54 Identities=17% Similarity=0.211 Sum_probs=35.7
Q ss_pred HHHHHHHHHH---HHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCCCcccccccccccCC
Q 016408 263 DIEATLSRVC---QMVLQDNNAKKEELRARAKALKTLGKIFQRAKSNNGSEGETVLSGGVHKLNG 324 (390)
Q Consensus 263 DIe~Tlr~VC---~kVL~D~~V~~e~R~kRA~AL~~LG~if~~~~~~~~e~~~~~~~~~~~~~~~ 324 (390)
|-+.++++++ +.+.+|.+||...|+.-.++...|. +.++.-..|.-++|..||+
T Consensus 6 ~~e~~ik~~~~~L~~I~~D~sVPRNIRraa~ea~~~L~--------~e~~~~~vRaA~AIs~Lde 62 (88)
T PRK04330 6 DNEEKIKQAIQMLEEIINDTSVPRNIRRAATEAKEILL--------NEEESPGVRAATAISILDE 62 (88)
T ss_pred chHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHh--------CcCcchhHHHHHHHHHHHH
Confidence 3344444444 4678999999999998888887764 2223334455566777775
No 86
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=21.13 E-value=1.8e+02 Score=21.12 Aligned_cols=39 Identities=21% Similarity=0.368 Sum_probs=27.4
Q ss_pred HHHHHHhCCCCCCCChHHHHHHHHHHHHHHhcCChhHHHHHHhh
Q 016408 15 GFQARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAY 58 (390)
Q Consensus 15 rklAlk~HPDKn~~~~~A~~kF~~I~eAYqVLsDp~~R~~YD~~ 58 (390)
|...+.-||+.+ ..+..+.|++.+..|++.++....+.+
T Consensus 16 r~~~~~~~p~~~-----~~~i~~~~~~~W~~ls~~eK~~y~~~a 54 (66)
T cd01390 16 RPKLKKENPDAS-----VTEVTKILGEKWKELSEEEKKKYEEKA 54 (66)
T ss_pred HHHHHHHCcCCC-----HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 444455677744 357888999999999987776655543
No 87
>PF03685 UPF0147: Uncharacterised protein family (UPF0147); InterPro: IPR005354 The proteins in this entry are functionally uncharacterised.; PDB: 2QZG_C 2QSB_A.
Probab=20.88 E-value=1.6e+02 Score=24.17 Aligned_cols=53 Identities=13% Similarity=0.194 Sum_probs=30.3
Q ss_pred HHHHHHHHH---HHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCCCcccccccccccCC
Q 016408 264 IEATLSRVC---QMVLQDNNAKKEELRARAKALKTLGKIFQRAKSNNGSEGETVLSGGVHKLNG 324 (390)
Q Consensus 264 Ie~Tlr~VC---~kVL~D~~V~~e~R~kRA~AL~~LG~if~~~~~~~~e~~~~~~~~~~~~~~~ 324 (390)
-+.++++|+ +.+..|.+||...|+.=-+|...|.+ .++.-..|..++|..||+
T Consensus 4 ~e~~i~~~~~~L~~I~~D~sVPRNIRr~a~ea~~~L~~--------e~~~~~vRaataIs~Lde 59 (85)
T PF03685_consen 4 NEEKIKQAIQMLERIINDTSVPRNIRRAAEEAKEILNN--------EEESPGVRAATAISILDE 59 (85)
T ss_dssp HHHHHHHHHHHHHHHHT-TTS-HHHHHHHHHHHHHCT---------TTS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHhC--------CCcchhHhHHHHHHHHHH
Confidence 344455444 56788999999999988887776532 122223444455555653
Done!