Query 016413
Match_columns 390
No_of_seqs 265 out of 2567
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 13:10:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016413.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016413hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 7.3E-49 2.5E-53 363.1 29.4 291 6-390 4-298 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 2.2E-46 7.5E-51 345.3 30.1 287 27-350 10-302 (302)
3 2vpj_A Kelch-like protein 12; 100.0 5.1E-46 1.8E-50 342.6 31.2 253 98-389 32-288 (301)
4 3ii7_A Kelch-like protein 7; p 100.0 6.5E-46 2.2E-50 342.8 30.7 255 97-390 24-283 (306)
5 3ii7_A Kelch-like protein 7; p 100.0 1.8E-45 6.1E-50 339.9 27.4 275 32-342 11-291 (306)
6 2xn4_A Kelch-like protein 2; s 100.0 4.9E-45 1.7E-49 336.3 30.0 254 97-389 30-287 (302)
7 4asc_A Kelch repeat and BTB do 100.0 8E-45 2.7E-49 337.0 28.0 246 116-389 33-287 (315)
8 2woz_A Kelch repeat and BTB do 100.0 4E-44 1.4E-48 332.8 22.9 289 31-354 14-314 (318)
9 2uvk_A YJHT; unknown function, 100.0 1.3E-43 4.6E-48 334.4 25.9 306 65-389 2-352 (357)
10 1zgk_A Kelch-like ECH-associat 100.0 3.5E-43 1.2E-47 324.9 26.9 252 57-341 45-305 (308)
11 2woz_A Kelch repeat and BTB do 100.0 2.1E-42 7.3E-47 321.1 25.0 259 98-385 25-293 (318)
12 4asc_A Kelch repeat and BTB do 100.0 1.8E-41 6.1E-46 314.4 16.2 236 98-356 68-306 (315)
13 2uvk_A YJHT; unknown function, 100.0 8.7E-41 3E-45 315.1 20.1 275 24-334 11-353 (357)
14 2vpj_A Kelch-like protein 12; 100.0 5.6E-40 1.9E-44 302.2 23.7 276 30-341 12-296 (301)
15 2zwa_A Leucine carboxyl methyl 100.0 4.6E-37 1.6E-41 312.9 21.8 275 27-380 392-695 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 5E-35 1.7E-39 298.0 23.4 242 108-385 378-641 (695)
17 1k3i_A Galactose oxidase precu 100.0 4.6E-36 1.6E-40 304.9 15.5 328 26-378 189-548 (656)
18 1k3i_A Galactose oxidase precu 100.0 1.9E-34 6.6E-39 292.9 14.2 298 52-389 167-507 (656)
19 3dsm_A Uncharacterized protein 97.8 0.012 4.2E-07 53.4 25.3 270 50-379 16-302 (328)
20 3q7m_A Lipoprotein YFGL, BAMB; 97.7 0.029 9.9E-07 51.7 26.6 268 28-381 49-339 (376)
21 3mbr_X Glutamine cyclotransfer 97.7 0.0028 9.6E-08 55.0 17.1 195 112-357 12-225 (243)
22 3dsm_A Uncharacterized protein 97.6 0.0067 2.3E-07 55.2 19.6 225 97-382 17-256 (328)
23 1l0q_A Surface layer protein; 97.4 0.0012 4.2E-08 61.2 11.5 179 33-251 2-187 (391)
24 3mbr_X Glutamine cyclotransfer 97.4 0.011 3.8E-07 51.2 16.4 111 160-290 12-122 (243)
25 3jrp_A Fusion protein of prote 97.3 0.007 2.4E-07 55.3 15.9 141 129-294 69-232 (379)
26 3nol_A Glutamine cyclotransfer 97.3 0.0072 2.5E-07 52.9 14.5 198 109-357 31-246 (262)
27 1ri6_A Putative isomerase YBHE 97.3 0.0072 2.5E-07 54.4 15.3 98 98-211 61-166 (343)
28 3q7m_A Lipoprotein YFGL, BAMB; 97.2 0.13 4.3E-06 47.3 23.8 212 98-384 64-303 (376)
29 2qc5_A Streptogramin B lactona 97.2 0.1 3.5E-06 45.7 22.8 172 32-235 30-205 (300)
30 1k8k_C P40, ARP2/3 complex 41 97.2 0.031 1.1E-06 50.9 18.5 150 32-205 19-172 (372)
31 2ovr_B FBW7, F-BOX/WD repeat p 97.1 0.042 1.4E-06 51.8 19.6 188 125-382 205-394 (445)
32 2z2n_A Virginiamycin B lyase; 97.0 0.16 5.6E-06 44.3 24.0 266 32-381 25-297 (299)
33 1p22_A F-BOX/WD-repeat protein 96.9 0.033 1.1E-06 52.5 16.7 163 98-294 194-357 (435)
34 2ovr_B FBW7, F-BOX/WD repeat p 96.9 0.065 2.2E-06 50.5 18.6 195 124-380 244-443 (445)
35 2hes_X YDR267CP; beta-propelle 96.9 0.047 1.6E-06 49.4 16.9 189 128-359 118-320 (330)
36 3nol_A Glutamine cyclotransfer 96.9 0.024 8.3E-07 49.5 13.8 114 157-290 31-144 (262)
37 4aez_A CDC20, WD repeat-contai 96.8 0.031 1.1E-06 52.1 15.2 174 52-251 114-291 (401)
38 3jrp_A Fusion protein of prote 96.8 0.021 7.3E-07 52.0 13.7 104 128-251 22-132 (379)
39 1k8k_C P40, ARP2/3 complex 41 96.7 0.023 8E-07 51.7 13.8 140 128-293 19-164 (372)
40 3jro_A Fusion protein of prote 96.7 0.023 7.8E-07 58.1 14.3 95 98-207 32-133 (753)
41 2iwa_A Glutamine cyclotransfer 96.7 0.089 3E-06 46.2 16.1 99 122-236 24-124 (266)
42 3ow8_A WD repeat-containing pr 96.7 0.078 2.7E-06 47.8 16.4 100 128-251 133-235 (321)
43 3nok_A Glutaminyl cyclase; bet 96.6 0.068 2.3E-06 46.8 15.0 96 122-236 58-153 (268)
44 3v7d_B Cell division control p 96.5 0.31 1E-05 45.9 20.5 145 177-383 278-425 (464)
45 1r5m_A SIR4-interacting protei 96.5 0.055 1.9E-06 50.0 14.4 67 125-208 213-280 (425)
46 3fm0_A Protein CIAO1; WDR39,SG 96.4 0.048 1.6E-06 49.7 13.3 185 128-359 27-217 (345)
47 4ery_A WD repeat-containing pr 96.4 0.11 3.9E-06 46.1 15.6 100 128-251 76-178 (312)
48 1rwi_B Serine/threonine-protei 96.4 0.36 1.2E-05 41.5 18.4 90 128-236 77-168 (270)
49 2iwa_A Glutamine cyclotransfer 96.4 0.13 4.5E-06 45.2 15.2 168 157-380 9-182 (266)
50 3vgz_A Uncharacterized protein 96.3 0.32 1.1E-05 43.6 18.5 97 98-209 70-176 (353)
51 1p22_A F-BOX/WD-repeat protein 96.3 0.067 2.3E-06 50.3 14.2 139 124-293 138-276 (435)
52 2xbg_A YCF48-like protein; pho 96.3 0.6 2.1E-05 42.1 20.8 202 98-355 16-223 (327)
53 3odt_A Protein DOA1; ubiquitin 96.2 0.21 7.1E-06 43.9 16.4 55 317-386 248-303 (313)
54 4ery_A WD repeat-containing pr 96.2 0.47 1.6E-05 41.9 18.8 65 128-209 118-183 (312)
55 3bws_A Protein LP49; two-domai 96.2 0.094 3.2E-06 48.9 14.6 97 98-211 145-248 (433)
56 1l0q_A Surface layer protein; 96.2 0.024 8.2E-07 52.3 10.2 98 129-251 2-103 (391)
57 3dwl_C Actin-related protein 2 96.2 0.14 4.7E-06 46.7 15.4 134 98-251 34-175 (377)
58 3bws_A Protein LP49; two-domai 96.1 0.1 3.4E-06 48.8 14.1 194 32-251 133-332 (433)
59 3jro_A Fusion protein of prote 96.0 0.037 1.3E-06 56.5 11.5 104 128-251 20-130 (753)
60 3dwl_C Actin-related protein 2 96.0 0.013 4.6E-07 53.7 7.6 140 128-293 22-168 (377)
61 2xbg_A YCF48-like protein; pho 96.0 0.59 2E-05 42.2 18.4 202 99-355 58-268 (327)
62 3vgz_A Uncharacterized protein 95.9 0.71 2.4E-05 41.2 18.4 71 129-209 53-123 (353)
63 4aow_A Guanine nucleotide-bind 95.8 0.033 1.1E-06 49.9 9.3 22 347-380 317-338 (340)
64 3bg1_A Protein SEC13 homolog; 95.8 0.16 5.6E-06 45.4 13.6 69 129-212 71-143 (316)
65 1rwi_B Serine/threonine-protei 95.7 0.62 2.1E-05 40.0 16.8 173 32-236 34-210 (270)
66 2pm7_B Protein transport prote 95.7 0.68 2.3E-05 40.7 17.4 64 129-207 67-133 (297)
67 3hfq_A Uncharacterized protein 95.7 0.17 5.9E-06 45.6 13.6 101 98-212 64-178 (347)
68 1gxr_A ESG1, transducin-like e 95.7 0.18 6E-06 44.9 13.5 130 98-251 120-253 (337)
69 2pm9_A Protein WEB1, protein t 95.7 0.41 1.4E-05 44.1 16.5 106 129-251 178-292 (416)
70 1got_B GT-beta; complex (GTP-b 95.7 0.66 2.3E-05 41.8 17.4 99 128-251 154-255 (340)
71 2hqs_A Protein TOLB; TOLB, PAL 95.7 0.21 7.1E-06 46.8 14.3 201 128-387 189-395 (415)
72 3nok_A Glutaminyl cyclase; bet 95.6 0.24 8.2E-06 43.3 13.3 98 170-290 56-153 (268)
73 3v7d_B Cell division control p 95.6 1.2 4.2E-05 41.7 19.7 177 126-359 277-455 (464)
74 1qhu_A Protein (hemopexin); be 95.6 0.55 1.9E-05 44.6 16.6 59 128-207 158-216 (460)
75 1gxr_A ESG1, transducin-like e 95.6 0.1 3.5E-06 46.5 11.3 102 128-251 108-212 (337)
76 3vl1_A 26S proteasome regulato 95.4 0.31 1.1E-05 45.0 14.5 64 128-208 150-214 (420)
77 2pm9_A Protein WEB1, protein t 95.4 0.97 3.3E-05 41.4 17.7 106 129-251 126-247 (416)
78 1r5m_A SIR4-interacting protei 95.3 0.47 1.6E-05 43.6 15.1 26 128-159 160-185 (425)
79 3b7f_A Glycosyl hydrolase, BNR 95.2 0.84 2.9E-05 42.2 16.7 95 107-213 43-154 (394)
80 2ojh_A Uncharacterized protein 95.2 0.13 4.3E-06 44.7 10.4 145 51-214 22-170 (297)
81 3b7f_A Glycosyl hydrolase, BNR 95.2 2 6.7E-05 39.7 22.9 100 98-213 82-215 (394)
82 1kb0_A Quinohemoprotein alcoho 95.2 3 0.0001 41.8 22.9 99 122-236 71-182 (677)
83 1got_B GT-beta; complex (GTP-b 95.1 0.62 2.1E-05 42.0 15.3 102 128-251 108-213 (340)
84 4a2l_A BT_4663, two-component 95.1 0.76 2.6E-05 47.0 17.5 205 52-290 378-604 (795)
85 3hfq_A Uncharacterized protein 95.1 0.13 4.4E-06 46.5 10.4 94 146-251 19-115 (347)
86 3bg1_A Protein SEC13 homolog; 95.1 0.24 8.2E-06 44.3 12.1 104 128-251 24-134 (316)
87 3i2n_A WD repeat-containing pr 95.1 0.13 4.3E-06 46.3 10.4 103 128-251 128-241 (357)
88 3v9f_A Two-component system se 95.1 0.98 3.4E-05 46.0 18.0 160 97-289 427-600 (781)
89 2hes_X YDR267CP; beta-propelle 95.0 1.2 4.2E-05 39.8 16.8 142 128-294 24-176 (330)
90 3u4y_A Uncharacterized protein 94.9 0.31 1E-05 43.4 12.5 132 32-186 9-147 (331)
91 2pm7_B Protein transport prote 94.9 0.58 2E-05 41.2 14.1 104 128-251 20-130 (297)
92 2pbi_B Guanine nucleotide-bind 94.8 1 3.6E-05 40.8 15.7 100 128-251 165-269 (354)
93 1sq9_A Antiviral protein SKI8; 94.7 0.46 1.6E-05 43.4 13.3 21 34-62 27-47 (397)
94 3ow8_A WD repeat-containing pr 94.7 0.39 1.3E-05 43.1 12.4 65 129-208 48-113 (321)
95 4g56_B MGC81050 protein; prote 94.7 0.28 9.7E-06 44.7 11.6 102 128-251 150-256 (357)
96 3u4y_A Uncharacterized protein 94.7 0.15 5E-06 45.6 9.5 132 97-251 20-158 (331)
97 3ei3_B DNA damage-binding prot 94.6 0.43 1.5E-05 43.6 12.7 145 34-206 87-236 (383)
98 4a2l_A BT_4663, two-component 94.6 3.8 0.00013 41.7 21.0 141 52-213 108-251 (795)
99 3scy_A Hypothetical bacterial 94.5 0.78 2.7E-05 41.5 14.3 35 32-68 12-46 (361)
100 3zwl_B Eukaryotic translation 94.5 0.41 1.4E-05 42.9 12.3 105 128-251 43-149 (369)
101 3v9f_A Two-component system se 94.5 1.3 4.4E-05 45.1 17.1 203 52-293 428-648 (781)
102 3k26_A Polycomb protein EED; W 94.4 1.2 4E-05 39.8 15.2 65 128-207 127-193 (366)
103 1q7f_A NHL, brain tumor CG1071 94.3 2.4 8.1E-05 36.7 17.3 95 128-236 40-139 (286)
104 4e54_B DNA damage-binding prot 94.3 0.79 2.7E-05 42.9 14.1 148 32-207 131-283 (435)
105 2z2n_A Virginiamycin B lyase; 94.2 2.5 8.5E-05 36.5 20.0 119 98-235 37-158 (299)
106 1vyh_C Platelet-activating fac 94.1 0.9 3.1E-05 42.2 14.0 65 128-209 203-268 (410)
107 2aq5_A Coronin-1A; WD40 repeat 94.1 0.38 1.3E-05 44.4 11.2 104 128-251 93-205 (402)
108 4a11_B DNA excision repair pro 94.0 0.6 2.1E-05 42.6 12.4 62 129-207 156-219 (408)
109 3f3f_A Nucleoporin SEH1; struc 94.0 3 0.0001 36.5 17.5 31 347-389 317-348 (351)
110 1nir_A Nitrite reductase; hemo 93.8 0.64 2.2E-05 45.3 12.7 24 32-63 148-171 (543)
111 1yfq_A Cell cycle arrest prote 93.8 3.3 0.00011 36.6 18.1 93 97-206 79-179 (342)
112 2qc5_A Streptogramin B lactona 93.7 3.1 0.00011 35.9 17.5 91 128-236 30-122 (300)
113 4e54_B DNA damage-binding prot 93.7 0.34 1.2E-05 45.5 10.2 104 128-251 131-238 (435)
114 2ad6_A Methanol dehydrogenase 93.5 6.1 0.00021 38.6 21.4 100 122-236 56-168 (571)
115 4gqb_B Methylosome protein 50; 93.4 0.91 3.1E-05 41.2 12.4 106 125-251 89-199 (344)
116 1ri6_A Putative isomerase YBHE 93.4 1.8 6.2E-05 38.2 14.2 63 129-205 141-208 (343)
117 3vl1_A 26S proteasome regulato 93.4 1.9 6.5E-05 39.6 14.8 100 128-251 108-210 (420)
118 3azo_A Aminopeptidase; POP fam 93.4 2.1 7.1E-05 42.3 15.9 243 97-386 102-376 (662)
119 2z3z_A Dipeptidyl aminopeptida 93.3 5.8 0.0002 39.4 19.3 65 145-213 235-301 (706)
120 3no2_A Uncharacterized protein 93.3 1.7 5.8E-05 38.0 13.6 88 128-236 4-95 (276)
121 4aez_A CDC20, WD repeat-contai 93.3 2.1 7.3E-05 39.3 15.0 131 97-251 113-246 (401)
122 3scy_A Hypothetical bacterial 93.0 0.51 1.8E-05 42.7 10.0 111 131-251 15-127 (361)
123 3fm0_A Protein CIAO1; WDR39,SG 93.0 0.45 1.5E-05 43.0 9.6 97 178-294 27-128 (345)
124 1sq9_A Antiviral protein SKI8; 93.0 1.5 5.2E-05 39.8 13.3 106 127-252 24-156 (397)
125 3lrv_A PRE-mRNA-splicing facto 92.9 5 0.00017 35.8 19.2 65 128-208 138-203 (343)
126 1w6s_A Methanol dehydrogenase 92.8 7.5 0.00026 38.3 18.6 99 122-235 56-173 (599)
127 2pbi_B Guanine nucleotide-bind 92.7 2.3 8E-05 38.4 14.0 21 128-154 117-137 (354)
128 4g56_B MGC81050 protein; prote 92.6 4.5 0.00015 36.5 15.9 28 128-155 53-80 (357)
129 3odt_A Protein DOA1; ubiquitin 92.6 2.8 9.5E-05 36.4 14.1 102 127-250 27-130 (313)
130 4gga_A P55CDC, cell division c 92.5 2.1 7.2E-05 39.6 13.8 95 52-156 126-220 (420)
131 1yfq_A Cell cycle arrest prote 92.5 1.6 5.5E-05 38.6 12.6 101 128-251 22-129 (342)
132 4gqb_B Methylosome protein 50; 92.4 1.5 5E-05 39.8 12.2 102 128-251 138-244 (344)
133 3k26_A Polycomb protein EED; W 92.4 0.52 1.8E-05 42.3 9.2 101 129-251 85-190 (366)
134 2hqs_A Protein TOLB; TOLB, PAL 92.4 2.5 8.6E-05 39.3 14.1 187 145-386 159-351 (415)
135 3mkq_A Coatomer beta'-subunit; 92.4 1.5 5E-05 44.5 13.4 101 128-251 66-170 (814)
136 2vdu_B TRNA (guanine-N(7)-)-me 92.3 2.6 9E-05 39.4 14.2 65 129-209 210-274 (450)
137 3mkq_A Coatomer beta'-subunit; 92.1 7.1 0.00024 39.4 18.1 103 128-251 108-215 (814)
138 2ynn_A Coatomer subunit beta'; 91.9 2.4 8.1E-05 37.3 12.8 101 128-251 24-126 (304)
139 3iuj_A Prolyl endopeptidase; h 91.7 8.1 0.00028 38.6 17.8 244 98-388 156-414 (693)
140 3sfz_A APAF-1, apoptotic pepti 91.7 3.2 0.00011 44.5 15.6 135 128-294 1014-1150(1249)
141 1vyh_C Platelet-activating fac 91.5 2.9 9.9E-05 38.7 13.4 100 128-251 119-221 (410)
142 3dm0_A Maltose-binding peripla 91.5 5.6 0.00019 39.6 16.4 102 128-251 483-590 (694)
143 4a11_B DNA excision repair pro 91.5 0.64 2.2E-05 42.4 8.7 103 128-251 55-173 (408)
144 3zwl_B Eukaryotic translation 91.4 0.9 3.1E-05 40.6 9.5 23 347-381 326-348 (369)
145 1q7f_A NHL, brain tumor CG1071 91.4 6.4 0.00022 33.8 21.8 93 128-236 88-182 (286)
146 2ojh_A Uncharacterized protein 91.3 3.1 0.00011 35.4 12.8 79 145-236 22-103 (297)
147 1kv9_A Type II quinohemoprotei 91.3 13 0.00043 37.1 22.6 98 122-235 60-169 (668)
148 3mmy_A MRNA export factor; mRN 91.3 2.8 9.7E-05 37.2 12.8 61 128-207 140-200 (368)
149 3mmy_A MRNA export factor; mRN 91.3 1.2 4.2E-05 39.7 10.3 98 128-251 97-197 (368)
150 2bkl_A Prolyl endopeptidase; m 91.0 4.4 0.00015 40.5 15.0 182 98-293 148-340 (695)
151 3ei3_B DNA damage-binding prot 91.0 3.7 0.00013 37.1 13.4 102 130-251 87-192 (383)
152 1pjx_A Dfpase, DIISOPROPYLFLUO 90.8 2.5 8.4E-05 37.0 11.7 98 128-236 28-135 (314)
153 2ynn_A Coatomer subunit beta'; 90.8 3 0.0001 36.6 12.2 101 128-251 66-170 (304)
154 3no2_A Uncharacterized protein 90.7 5.6 0.00019 34.6 13.7 201 98-354 16-230 (276)
155 4ggc_A P55CDC, cell division c 90.6 6.5 0.00022 34.0 14.3 15 52-66 46-60 (318)
156 3iz6_a 40S ribosomal protein R 90.5 9.8 0.00033 34.5 17.9 190 129-380 170-376 (380)
157 1pjx_A Dfpase, DIISOPROPYLFLUO 90.5 5.6 0.00019 34.6 13.8 138 52-205 47-206 (314)
158 3sfz_A APAF-1, apoptotic pepti 90.3 2.1 7.3E-05 45.8 12.6 188 128-381 972-1160(1249)
159 2xdw_A Prolyl endopeptidase; a 90.3 6.7 0.00023 39.2 15.6 183 98-293 152-357 (710)
160 1pgu_A Actin interacting prote 90.3 1.8 6.3E-05 41.9 11.2 66 128-204 77-149 (615)
161 3i2n_A WD repeat-containing pr 90.3 3.8 0.00013 36.3 12.6 67 129-208 31-101 (357)
162 1pgu_A Actin interacting prote 90.1 14 0.00047 35.5 19.5 133 179-359 456-606 (615)
163 1yiq_A Quinohemoprotein alcoho 90.0 17 0.00057 36.4 22.7 98 122-235 64-174 (689)
164 3pe7_A Oligogalacturonate lyas 89.7 6.2 0.00021 35.6 13.7 65 145-214 168-233 (388)
165 3a0f_A Xyloglucanase; beta-pro 89.6 19 0.00066 36.4 23.4 152 98-270 44-223 (763)
166 3f3f_A Nucleoporin SEH1; struc 89.4 5.2 0.00018 34.9 12.7 104 128-251 22-141 (351)
167 4gga_A P55CDC, cell division c 89.3 6.8 0.00023 36.1 13.9 82 146-238 126-208 (420)
168 2dg1_A DRP35, lactonase; beta 89.1 6.6 0.00023 34.6 13.2 95 128-235 55-152 (333)
169 1sqj_A OXG-RCBH, oligoxylogluc 89.1 21 0.00072 36.3 23.0 199 98-333 38-279 (789)
170 3iz6_a 40S ribosomal protein R 88.5 4.9 0.00017 36.6 12.1 63 128-206 77-139 (380)
171 2ymu_A WD-40 repeat protein; u 88.3 4.1 0.00014 39.2 12.0 98 128-250 396-495 (577)
172 3g4e_A Regucalcin; six bladed 88.2 8.3 0.00029 33.6 13.1 217 32-292 24-263 (297)
173 3g4e_A Regucalcin; six bladed 88.1 2.1 7E-05 37.7 8.9 66 128-214 24-90 (297)
174 2xzm_R RACK1; ribosome, transl 88.0 8.8 0.0003 34.1 13.4 23 128-156 129-151 (343)
175 1erj_A Transcriptional repress 87.9 2.8 9.5E-05 38.5 10.0 100 128-251 134-236 (393)
176 2cn3_A Xyloglucanase, beta-1,4 87.9 24 0.00083 35.5 24.0 239 106-389 10-293 (737)
177 2z3z_A Dipeptidyl aminopeptida 87.6 21 0.00071 35.3 17.0 18 196-213 234-251 (706)
178 1pex_A Collagenase-3, MMP-13; 86.8 5.1 0.00017 33.4 10.0 53 173-237 28-88 (207)
179 2ecf_A Dipeptidyl peptidase IV 86.8 21 0.0007 35.6 16.5 28 128-162 162-189 (741)
180 1sqj_A OXG-RCBH, oligoxylogluc 86.7 30 0.001 35.2 26.5 234 106-389 3-279 (789)
181 2xyi_A Probable histone-bindin 86.2 2.3 7.7E-05 39.6 8.4 20 129-154 141-160 (430)
182 2ymu_A WD-40 repeat protein; u 85.7 9.9 0.00034 36.4 13.1 61 128-206 355-416 (577)
183 3frx_A Guanine nucleotide-bind 85.6 12 0.00041 32.9 12.7 99 128-251 118-225 (319)
184 1nir_A Nitrite reductase; hemo 85.5 8.6 0.00029 37.2 12.5 91 98-209 160-260 (543)
185 3e5z_A Putative gluconolactona 85.5 17 0.00058 31.3 15.3 87 129-234 40-131 (296)
186 1pby_B Quinohemoprotein amine 85.4 7.9 0.00027 33.8 11.4 76 129-210 46-128 (337)
187 3c5m_A Oligogalacturonate lyas 85.2 13 0.00045 33.3 13.1 128 98-236 169-301 (396)
188 3c5m_A Oligogalacturonate lyas 85.1 9.7 0.00033 34.2 12.1 63 145-214 168-233 (396)
189 3pe7_A Oligogalacturonate lyas 84.4 11 0.00038 33.8 12.2 108 98-213 61-184 (388)
190 2aq5_A Coronin-1A; WD40 repeat 84.3 23 0.0008 32.0 14.7 24 178-209 93-116 (402)
191 2vdu_B TRNA (guanine-N(7)-)-me 83.9 22 0.00075 32.9 14.2 64 196-264 329-397 (450)
192 2xzm_R RACK1; ribosome, transl 83.6 17 0.00057 32.2 12.9 102 128-251 38-147 (343)
193 2fp8_A Strictosidine synthase; 83.1 13 0.00045 32.7 11.8 83 122-212 83-180 (322)
194 2cn3_A Xyloglucanase, beta-1,4 83.1 41 0.0014 33.8 24.0 226 98-356 46-322 (737)
195 2ghs_A AGR_C_1268P; regucalcin 83.1 22 0.00077 31.3 13.4 66 129-214 61-126 (326)
196 3azo_A Aminopeptidase; POP fam 83.0 37 0.0012 33.2 16.5 201 145-385 102-331 (662)
197 3lrv_A PRE-mRNA-splicing facto 82.8 25 0.00084 31.1 15.3 23 128-156 47-69 (343)
198 3e5z_A Putative gluconolactona 82.5 23 0.00077 30.5 16.3 149 34-209 41-206 (296)
199 1nr0_A Actin interacting prote 82.1 39 0.0013 32.8 18.5 26 128-159 335-360 (611)
200 4aow_A Guanine nucleotide-bind 81.8 19 0.00066 31.2 12.4 67 129-210 51-121 (340)
201 1erj_A Transcriptional repress 81.5 13 0.00045 33.8 11.5 93 178-294 134-230 (393)
202 4h5i_A Guanine nucleotide-exch 81.4 30 0.001 31.0 15.4 169 146-359 158-335 (365)
203 3dm0_A Maltose-binding peripla 80.8 18 0.00061 35.9 12.9 65 129-208 395-463 (694)
204 1yr2_A Prolyl oligopeptidase; 80.7 39 0.0014 33.8 15.5 196 145-387 243-449 (741)
205 1pex_A Collagenase-3, MMP-13; 80.5 23 0.0008 29.3 13.7 95 122-237 27-136 (207)
206 3fvz_A Peptidyl-glycine alpha- 79.7 32 0.0011 30.3 24.2 145 128-293 154-313 (329)
207 2p4o_A Hypothetical protein; p 79.6 31 0.001 30.1 19.2 95 96-207 52-148 (306)
208 2ecf_A Dipeptidyl peptidase IV 79.4 12 0.00042 37.3 11.2 33 128-161 47-80 (741)
209 3a0f_A Xyloglucanase; beta-pro 79.4 56 0.0019 33.0 22.0 202 147-389 45-294 (763)
210 1yiq_A Quinohemoprotein alcoho 79.3 12 0.00042 37.3 11.1 121 223-384 65-199 (689)
211 3hxj_A Pyrrolo-quinoline quino 78.6 32 0.0011 29.8 14.1 87 125-235 104-194 (330)
212 1qks_A Cytochrome CD1 nitrite 78.4 14 0.00048 36.0 10.9 39 196-234 319-359 (567)
213 3o4h_A Acylamino-acid-releasin 78.0 14 0.00048 35.7 10.9 59 147-214 134-192 (582)
214 1su3_A Interstitial collagenas 77.9 7.3 0.00025 36.8 8.4 53 173-237 267-327 (450)
215 4ggc_A P55CDC, cell division c 76.6 19 0.00064 30.9 10.5 83 197-293 45-129 (318)
216 2ad6_A Methanol dehydrogenase 75.7 15 0.0005 35.8 10.2 123 223-384 57-192 (571)
217 3fvz_A Peptidyl-glycine alpha- 75.1 43 0.0015 29.4 22.9 199 128-379 101-322 (329)
218 1npe_A Nidogen, entactin; glyc 75.0 37 0.0013 28.6 20.5 186 128-381 47-240 (267)
219 3ott_A Two-component system se 74.9 47 0.0016 33.3 14.2 133 128-293 482-618 (758)
220 1itv_A MMP9; adaptive molecula 74.9 33 0.0011 28.0 12.7 53 173-237 11-73 (195)
221 2hz6_A Endoplasmic reticulum t 74.8 1 3.6E-05 41.3 1.6 51 174-237 5-57 (369)
222 1n7d_A LDL receptor, low-densi 74.6 72 0.0025 31.8 18.4 94 122-235 409-514 (699)
223 3frx_A Guanine nucleotide-bind 74.3 13 0.00043 32.7 8.7 59 178-251 76-136 (319)
224 1kb0_A Quinohemoprotein alcoho 73.9 23 0.00079 35.2 11.3 121 223-384 72-206 (677)
225 1kv9_A Type II quinohemoprotei 73.8 23 0.00078 35.2 11.3 121 223-384 61-194 (668)
226 3ott_A Two-component system se 73.3 78 0.0027 31.6 16.5 141 32-206 482-626 (758)
227 1jmx_B Amine dehydrogenase; ox 73.0 6 0.00021 34.8 6.3 61 177-250 9-71 (349)
228 3hrp_A Uncharacterized protein 72.2 60 0.002 29.8 17.7 82 146-236 195-286 (409)
229 3oyo_A Hemopexin fold protein 72.1 24 0.00084 29.6 9.4 19 346-378 179-197 (225)
230 2xyi_A Probable histone-bindin 71.7 13 0.00043 34.4 8.4 101 131-251 196-307 (430)
231 1qks_A Cytochrome CD1 nitrite 71.3 22 0.00075 34.6 10.2 59 128-205 166-226 (567)
232 1nr0_A Actin interacting prote 71.2 77 0.0026 30.6 14.8 23 128-156 70-92 (611)
233 1flg_A Protein (quinoprotein e 71.0 79 0.0027 30.7 22.5 75 122-212 62-144 (582)
234 3o4h_A Acylamino-acid-releasin 70.0 71 0.0024 30.5 13.7 199 125-383 29-231 (582)
235 3ju4_A Endo-N-acetylneuraminid 69.7 70 0.0024 29.6 20.7 183 107-292 270-482 (670)
236 2dg1_A DRP35, lactonase; beta 69.7 18 0.00063 31.6 8.7 118 228-383 55-175 (333)
237 3hxj_A Pyrrolo-quinoline quino 68.8 56 0.0019 28.1 13.6 71 147-234 80-153 (330)
238 3hrp_A Uncharacterized protein 67.0 77 0.0026 29.0 18.9 91 128-234 141-236 (409)
239 3ba0_A Macrophage metalloelast 66.4 30 0.001 31.6 9.4 25 344-382 328-353 (365)
240 3gre_A Serine/threonine-protei 66.1 77 0.0026 28.7 13.9 67 128-209 181-248 (437)
241 1n7d_A LDL receptor, low-densi 64.5 1.2E+02 0.004 30.3 14.2 132 127-291 463-603 (699)
242 1k32_A Tricorn protease; prote 64.3 73 0.0025 33.3 13.2 57 145-213 358-416 (1045)
243 1w6s_A Methanol dehydrogenase 64.0 31 0.0011 33.8 9.7 125 222-385 56-199 (599)
244 1qhu_A Protein (hemopexin); be 63.7 99 0.0034 29.1 18.5 48 178-238 158-207 (460)
245 1itv_A MMP9; adaptive molecula 62.2 48 0.0016 27.0 9.1 92 128-237 64-165 (195)
246 1pby_B Quinohemoprotein amine 61.6 76 0.0026 27.1 11.5 66 130-210 2-69 (337)
247 1hxn_A Hemopexin, HPX; heme, b 61.2 12 0.0004 31.5 5.2 52 227-291 27-81 (219)
248 1flg_A Protein (quinoprotein e 60.5 79 0.0027 30.7 11.9 56 223-289 63-124 (582)
249 3c7x_A Matrix metalloproteinas 60.3 68 0.0023 26.1 11.7 22 173-204 10-31 (196)
250 2xdw_A Prolyl endopeptidase; a 59.3 1.4E+02 0.0048 29.4 17.6 209 128-380 135-369 (710)
251 2p4o_A Hypothetical protein; p 58.4 90 0.0031 26.9 17.9 94 99-206 97-198 (306)
252 3gre_A Serine/threonine-protei 56.5 1.1E+02 0.0039 27.5 12.5 61 178-251 181-243 (437)
253 4h5i_A Guanine nucleotide-exch 55.9 1E+02 0.0035 27.4 11.2 99 177-293 229-334 (365)
254 3v65_B Low-density lipoprotein 55.5 1.2E+02 0.0041 27.4 21.0 194 98-354 97-305 (386)
255 2bkl_A Prolyl endopeptidase; m 55.3 1.6E+02 0.0055 28.9 19.5 78 128-210 79-160 (695)
256 1jmx_B Amine dehydrogenase; ox 53.0 43 0.0015 29.0 8.0 67 128-210 10-78 (349)
257 3vu4_A KMHSV2; beta-propeller 47.2 1.5E+02 0.0051 26.1 12.1 184 128-381 30-229 (355)
258 2mad_H Methylamine dehydrogena 45.9 1.7E+02 0.0057 26.3 20.1 101 98-209 48-159 (373)
259 2ece_A 462AA long hypothetical 44.7 2E+02 0.007 26.9 11.8 72 128-208 95-175 (462)
260 1ijq_A LDL receptor, low-densi 43.8 1.6E+02 0.0055 25.5 23.7 198 98-354 11-225 (316)
261 3tc9_A Hypothetical hydrolase; 43.8 72 0.0025 29.5 8.2 47 178-236 149-198 (430)
262 3v64_C Agrin; beta propeller, 41.3 1.9E+02 0.0064 25.6 22.7 197 98-355 54-263 (349)
263 4hvt_A Ritya.17583.B, post-pro 40.8 90 0.0031 31.2 8.7 154 196-389 268-439 (711)
264 3qhy_B Beta-lactamase inhibito 40.3 1.8E+02 0.006 25.0 10.5 57 170-237 150-206 (282)
265 1xfd_A DIP, dipeptidyl aminope 40.2 2.1E+02 0.0071 27.9 11.5 76 128-212 71-149 (723)
266 2ghs_A AGR_C_1268P; regucalcin 37.8 1.1E+02 0.0038 26.6 8.2 94 98-205 110-209 (326)
267 3m0c_C LDL receptor, low-densi 37.7 3.4E+02 0.011 27.5 20.9 168 128-355 435-620 (791)
268 3p5b_L Low density lipoprotein 37.3 2.4E+02 0.0081 25.6 22.2 197 98-354 93-307 (400)
269 3v65_B Low-density lipoprotein 37.0 2.3E+02 0.0079 25.4 20.2 159 97-291 138-307 (386)
270 3ju4_A Endo-N-acetylneuraminid 35.7 2.3E+02 0.008 26.2 9.5 125 205-355 268-405 (670)
271 4fj6_A Glycoside hydrolase fam 35.7 1.8E+02 0.0063 27.7 9.7 160 171-353 328-502 (523)
272 2mad_H Methylamine dehydrogena 34.2 2.2E+02 0.0074 25.5 9.7 85 128-226 278-369 (373)
273 3m0c_C LDL receptor, low-densi 31.9 4.1E+02 0.014 26.8 19.3 133 128-292 482-622 (791)
274 3sjl_D Methylamine dehydrogena 31.8 73 0.0025 29.2 5.9 70 128-209 291-366 (386)
275 1gen_A Gelatinase A; hydrolase 31.3 2.2E+02 0.0076 23.4 10.6 15 223-237 35-49 (218)
276 3oyo_A Hemopexin fold protein 29.4 2.4E+02 0.008 23.4 8.3 60 128-205 127-197 (225)
277 3sre_A PON1, serum paraoxonase 29.3 3.1E+02 0.011 24.5 10.6 74 130-205 128-211 (355)
278 3dr2_A Exported gluconolactona 28.8 2.7E+02 0.0091 23.6 9.4 55 145-207 169-225 (305)
279 3tc9_A Hypothetical hydrolase; 28.7 2.3E+02 0.0079 26.0 9.0 89 128-235 149-244 (430)
280 3ba0_A Macrophage metalloelast 27.0 2.7E+02 0.0092 25.1 8.8 63 128-211 284-355 (365)
281 1yr2_A Prolyl oligopeptidase; 26.9 4.6E+02 0.016 25.7 17.8 206 128-380 173-396 (741)
282 1gen_A Gelatinase A; hydrolase 26.2 2.7E+02 0.0094 22.9 11.9 92 128-237 87-193 (218)
283 2hz6_A Endoplasmic reticulum t 24.1 42 0.0014 30.2 2.9 46 317-380 21-69 (369)
284 1ijq_A LDL receptor, low-densi 24.0 3.5E+02 0.012 23.3 20.8 133 127-290 87-226 (316)
285 3lp9_A LS-24; SEED albumin, pl 23.4 45 0.0015 28.0 2.7 62 127-207 71-148 (227)
286 4hw6_A Hypothetical protein, I 23.3 4.3E+02 0.015 24.1 11.3 47 179-236 153-200 (433)
287 1hxn_A Hemopexin, HPX; heme, b 22.2 3.3E+02 0.011 22.4 14.5 57 127-205 27-89 (219)
288 1npe_A Nidogen, entactin; glyc 21.3 3.4E+02 0.012 22.3 19.0 91 128-236 133-226 (267)
289 3c7x_A Matrix metalloproteinas 20.9 3.3E+02 0.011 21.9 9.1 62 128-208 109-177 (196)
290 3iuj_A Prolyl endopeptidase; h 20.7 5.9E+02 0.02 24.8 16.8 82 145-236 259-345 (693)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=7.3e-49 Score=363.06 Aligned_cols=291 Identities=19% Similarity=0.299 Sum_probs=234.3
Q ss_pred cCCccccccchhhHHHHHHHHHHHhhccEEEEecCCCCCCCccccceeeeeccCCCceEeecCCCCCccccccceEEEec
Q 016413 6 HHNKHTYTKTGCWFLCVLGLLGAALIADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVID 85 (390)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~ 85 (390)
||-.|..+- ..+-.|+++.+++.||++||. .+ ..++++
T Consensus 4 ~~~~~~~~~------~~~~~~~~~~~~~~i~v~GG~-~~---~~~~~~-------------------------------- 41 (308)
T 1zgk_A 4 HHHHHHSSG------LVPRGSHAPKVGRLIYTAGGY-FR---QSLSYL-------------------------------- 41 (308)
T ss_dssp -----------------------CCCCCCEEEECCB-SS---SBCCCE--------------------------------
T ss_pred cccccccCC------eeeCCccccCCCCEEEEEeCc-CC---CCcceE--------------------------------
Confidence 555555443 345689999999999999998 22 233444
Q ss_pred CCCchhHHHhhhcccccccCCCCeEECCCCCCcCCCceEEEECCEEEEEecCC---CCCCCCCeEEEEeCCCCceeecCC
Q 016413 86 KKGQDAERFLSATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYG---SLDYVHSHVDVYNFTDNKWVDRFD 162 (390)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~---~~~~~~~~v~~yd~~~~~W~~~~~ 162 (390)
+.||+.+++|+.++++|.+|..|++++++++|||+||.. .....++++++||+.+++|+.+++
T Consensus 42 --------------~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 107 (308)
T 1zgk_A 42 --------------EAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAP 107 (308)
T ss_dssp --------------EEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCC
T ss_pred --------------EEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCC
Confidence 445555566666666788899999999999999999983 223356889999999999999999
Q ss_pred CCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCC
Q 016413 163 MPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRH 242 (390)
Q Consensus 163 l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 242 (390)
||. +|..+++++++++|||+||.++.. ..+++++||+.+++|+.++++|.+|..|++++++++|||+||......
T Consensus 108 ~p~--~r~~~~~~~~~~~iyv~GG~~~~~---~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 182 (308)
T 1zgk_A 108 MSV--PRNRIGVGVIDGHIYAVGGSHGCI---HHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNR 182 (308)
T ss_dssp CSS--CCBTCEEEEETTEEEEECCEETTE---ECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCB
T ss_pred CCc--CccccEEEEECCEEEEEcCCCCCc---ccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCc
Confidence 887 588999999999999999987643 378999999999999999999999999999999999999999887665
Q ss_pred CCCcceEEeeeeccccccCCeEEccCCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-
Q 016413 243 TPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD- 321 (390)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd- 321 (390)
.+.+++|| +.+++|+.++++|.+|..+++++++++|||+||.++.. .++++++||
T Consensus 183 ~~~~~~yd-------~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-----------------~~~~v~~yd~ 238 (308)
T 1zgk_A 183 LNSAECYY-------PERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQD-----------------QLNSVERYDV 238 (308)
T ss_dssp CCCEEEEE-------TTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSS-----------------BCCCEEEEET
T ss_pred CceEEEEe-------CCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCC-----------------ccceEEEEeC
Confidence 66677776 68999999999999999999999999999999987532 367899999
Q ss_pred CCCCeEECCCCCCCCCcceeEEEEECCEEEEEcCCCCCCCcceeeEEeeeEEEeecCccceeeccCCCC
Q 016413 322 DEMKWKVLPPMPKPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLVIIYHYRPPK 390 (390)
Q Consensus 322 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~P~ 390 (390)
.+++|+.++++|.+|..+ +++.++++|||+||.+... .++++++||+++++|..++.+|.
T Consensus 239 ~~~~W~~~~~~p~~r~~~--~~~~~~~~i~v~GG~~~~~-------~~~~v~~yd~~~~~W~~~~~~p~ 298 (308)
T 1zgk_A 239 ETETWTFVAPMKHRRSAL--GITVHQGRIYVLGGYDGHT-------FLDSVECYDPDTDTWSEVTRMTS 298 (308)
T ss_dssp TTTEEEECCCCSSCCBSC--EEEEETTEEEEECCBCSSC-------BCCEEEEEETTTTEEEEEEECSS
T ss_pred CCCcEEECCCCCCCccce--EEEEECCEEEEEcCcCCCc-------ccceEEEEcCCCCEEeecCCCCC
Confidence 788999999999988765 4578899999999987654 56799999999999999998884
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.2e-46 Score=345.33 Aligned_cols=287 Identities=17% Similarity=0.276 Sum_probs=240.4
Q ss_pred HHHhhccEEEEecCCCCCCCccccceeeeeccCCCceEeecCCCCCccccccceEEEecCC----CchhHHHhhhccccc
Q 016413 27 GAALIADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKK----GQDAERFLSATFADL 102 (390)
Q Consensus 27 ~~~~~~~~l~~~GG~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~ 102 (390)
..+.+++.||++||.. ...++++++||+.+++|..++.++.+ |..++++++++. |.........+++.|
T Consensus 10 ~~~~~~~~i~v~GG~~----~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 82 (302)
T 2xn4_A 10 TPMNLPKLMVVVGGQA----PKAIRSVECYDFKEERWHQVAELPSR---RCRAGMVYMAGLVFAVGGFNGSLRVRTVDSY 82 (302)
T ss_dssp -----CEEEEEECCBS----SSBCCCEEEEETTTTEEEEECCCSSC---CBSCEEEEETTEEEEESCBCSSSBCCCEEEE
T ss_pred cccCCCCEEEEECCCC----CCCCCcEEEEcCcCCcEeEcccCCcc---cccceEEEECCEEEEEeCcCCCccccceEEE
Confidence 3455789999999982 23678899999999999999988877 999988877655 221111223489999
Q ss_pred ccCCCCeEECCCCCCcCCCceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEE
Q 016413 103 PAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIY 182 (390)
Q Consensus 103 ~~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iy 182 (390)
|+.+++|+.++++|.+|..|++++++++|||+||.+... .++++++||+.+++|+.++++|. +|..+++++.+++||
T Consensus 83 d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~~~iy 159 (302)
T 2xn4_A 83 DPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGST-GLSSVEAYNIKSNEWFHVAPMNT--RRSSVGVGVVGGLLY 159 (302)
T ss_dssp ETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSC-EEEEEEEEETTTTEEEEECCCSS--CCBSCEEEEETTEEE
T ss_pred CCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCc-cCceEEEEeCCCCeEeecCCCCC--cccCceEEEECCEEE
Confidence 999999999999999999999999999999999987644 46889999999999999999887 588999999999999
Q ss_pred EEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCC
Q 016413 183 IVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKA 262 (390)
Q Consensus 183 v~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (390)
++||.+.... ...+++++||+.+++|+.+++||.+|..|++++++++|||+||.........+++|| +.+++
T Consensus 160 v~GG~~~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd-------~~~~~ 231 (302)
T 2xn4_A 160 AVGGYDVASR-QCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYD-------PTTNA 231 (302)
T ss_dssp EECCEETTTT-EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEE-------TTTTE
T ss_pred EEeCCCCCCC-ccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEe-------CCCCC
Confidence 9999976532 247899999999999999999999999999999999999999987766666777777 68999
Q ss_pred eEEccCCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECC-CCCCCCCcce
Q 016413 263 WRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLP-PMPKPNSHIE 340 (390)
Q Consensus 263 W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~-~~~~~~~~~~ 340 (390)
|+.++++|.+|..+++++++++|||+||.++. ..++++++|| .+++|+.++ .||.+|..++
T Consensus 232 W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~-----------------~~~~~v~~yd~~~~~W~~~~~~~~~~r~~~~ 294 (302)
T 2xn4_A 232 WRQVADMNMCRRNAGVCAVNGLLYVVGGDDGS-----------------CNLASVEYYNPTTDKWTVVSSCMSTGRSYAG 294 (302)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEECCBCSS-----------------SBCCCEEEEETTTTEEEECSSCCSSCCBSCE
T ss_pred EeeCCCCCCccccCeEEEECCEEEEECCcCCC-----------------cccccEEEEcCCCCeEEECCcccCcccccce
Confidence 99999999999999999999999999998654 2467899999 788999997 8999987654
Q ss_pred eEEEEECCEE
Q 016413 341 CAWVIVNNSI 350 (390)
Q Consensus 341 ~~~~~~~~~l 350 (390)
+++++++|
T Consensus 295 --~~~~~~~i 302 (302)
T 2xn4_A 295 --VTVIDKRL 302 (302)
T ss_dssp --EEEEEC--
T ss_pred --EEEecccC
Confidence 46666664
No 3
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=5.1e-46 Score=342.62 Aligned_cols=253 Identities=17% Similarity=0.306 Sum_probs=220.8
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCc---eeecCCCCCCCCCcceEE
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK---WVDRFDMPKDMAHSHLGV 174 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~---W~~~~~l~~~~~r~~~~~ 174 (390)
+++.||+.+++|+.++++|.+|..|++++++++|||+||.+... .++++++||+.+++ |+.++++|. +|..|++
T Consensus 32 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~-~~~~~~~~d~~~~~~~~W~~~~~~p~--~r~~~~~ 108 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRS-RLSSVECLDYTADEDGVWYSVAPMNV--RRGLAGA 108 (301)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSC-BCCCEEEEETTCCTTCCCEEECCCSS--CCBSCEE
T ss_pred EEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCc-cCceEEEEECCCCCCCeeEECCCCCC--CccceeE
Confidence 45555556667777777788899999999999999999988543 56889999999999 999999887 5889999
Q ss_pred EEeCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeee
Q 016413 175 VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVK 254 (390)
Q Consensus 175 ~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 254 (390)
++.+++||++||.++.. ..+++++||+.+++|+.++++|.+|..|++++++++||++||.......+.+++||
T Consensus 109 ~~~~~~lyv~GG~~~~~---~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d---- 181 (301)
T 2vpj_A 109 TTLGDMIYVSGGFDGSR---RHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYD---- 181 (301)
T ss_dssp EEETTEEEEECCBCSSC---BCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEE----
T ss_pred EEECCEEEEEcccCCCc---ccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEe----
Confidence 99999999999987643 37899999999999999999999999999999999999999988766667777777
Q ss_pred ccccccCCeEEccCCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCC
Q 016413 255 DGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMP 333 (390)
Q Consensus 255 ~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~ 333 (390)
+.+++|+.++++|.+|..+++++++++|||+||.+... .++++++|| .+++|+.++++|
T Consensus 182 ---~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~v~~yd~~~~~W~~~~~~p 241 (301)
T 2vpj_A 182 ---PHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTA-----------------HLSSVEAYNIRTDSWTTVTSMT 241 (301)
T ss_dssp ---TTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSS-----------------BCCCEEEEETTTTEEEEECCCS
T ss_pred ---CCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCc-----------------ccceEEEEeCCCCcEEECCCCC
Confidence 68999999999999999999999999999999987542 367899999 788999999999
Q ss_pred CCCCcceeEEEEECCEEEEEcCCCCCCCcceeeEEeeeEEEeecCccceeeccCCC
Q 016413 334 KPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLVIIYHYRPP 389 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~P 389 (390)
.+|..+ +++.++++|||+||.+... .++++++||+++++|..++.+|
T Consensus 242 ~~r~~~--~~~~~~~~i~v~GG~~~~~-------~~~~v~~yd~~~~~W~~~~~~~ 288 (301)
T 2vpj_A 242 TPRCYV--GATVLRGRLYAIAGYDGNS-------LLSSIECYDPIIDSWEVVTSMG 288 (301)
T ss_dssp SCCBSC--EEEEETTEEEEECCBCSSS-------BEEEEEEEETTTTEEEEEEEEE
T ss_pred Ccccce--eEEEECCEEEEEcCcCCCc-------ccccEEEEcCCCCeEEEcCCCC
Confidence 998765 4578899999999987664 5679999999999999998877
No 4
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=6.5e-46 Score=342.81 Aligned_cols=255 Identities=19% Similarity=0.346 Sum_probs=226.7
Q ss_pred hcccccccCCCCeEECCCCCCcCCCceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE
Q 016413 97 ATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (390)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~ 176 (390)
.+++.||+.+++|+.++++|.+|..|++++++++|||+||.+ ...++++++||+.+++|+.++++|. +|..|++++
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~ 99 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLGPPT--PRDSLAACA 99 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEETTTTEEEEEECCSS--CCBSCEEEE
T ss_pred ceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC--CCCcceEEEEeCCCCeEEECCCCCc--cccceeEEE
Confidence 489999999999999999999999999999999999999988 4457899999999999999999887 688999999
Q ss_pred eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCC----CCCcceEEee
Q 016413 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRH----TPGLEHWSIA 252 (390)
Q Consensus 177 ~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~----~~~~~~~~~~ 252 (390)
++++|||+||.+... ...+++++||+.+++|+.+++||.+|..|++++++++|||+||...... .+++++||
T Consensus 100 ~~~~iyv~GG~~~~~--~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd-- 175 (306)
T 3ii7_A 100 AEGKIYTSGGSEVGN--SALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYD-- 175 (306)
T ss_dssp ETTEEEEECCBBTTB--SCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEE--
T ss_pred ECCEEEEECCCCCCC--cEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeC--
Confidence 999999999987332 3479999999999999999999999999999999999999999865543 56666666
Q ss_pred eeccccccCCeEEccCCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCC
Q 016413 253 VKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPP 331 (390)
Q Consensus 253 ~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~ 331 (390)
+.+++|+.++++|.+|..+++++++++|||+||.+.. ..++++++|| .+++|+.+++
T Consensus 176 -----~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~-----------------~~~~~~~~yd~~~~~W~~~~~ 233 (306)
T 3ii7_A 176 -----PATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGL-----------------GGLDNVEYYDIKLNEWKMVSP 233 (306)
T ss_dssp -----TTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETT-----------------EEBCCEEEEETTTTEEEECCC
T ss_pred -----CCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCC-----------------CCCceEEEeeCCCCcEEECCC
Confidence 7899999999999999999999999999999997653 3467899999 7889999999
Q ss_pred CCCCCCcceeEEEEECCEEEEEcCCCCCCCcceeeEEeeeEEEeecCccceeeccCCCC
Q 016413 332 MPKPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLVIIYHYRPPK 390 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~P~ 390 (390)
+|.+|..+ +++.++++|||+||.++.. .++++++||+++++|..++.+|.
T Consensus 234 ~p~~r~~~--~~~~~~~~i~v~GG~~~~~-------~~~~~~~yd~~~~~W~~~~~~~~ 283 (306)
T 3ii7_A 234 MPWKGVTV--KCAAVGSIVYVLAGFQGVG-------RLGHILEYNTETDKWVANSKVRA 283 (306)
T ss_dssp CSCCBSCC--EEEEETTEEEEEECBCSSS-------BCCEEEEEETTTTEEEEEEEEEC
T ss_pred CCCCccce--eEEEECCEEEEEeCcCCCe-------eeeeEEEEcCCCCeEEeCCCccc
Confidence 99988765 4578899999999997664 56789999999999999987763
No 5
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.8e-45 Score=339.88 Aligned_cols=275 Identities=16% Similarity=0.232 Sum_probs=238.2
Q ss_pred ccEEEEecCCCCCCCccccceeeeeccCCCceEeecCCCCCccccccceEEEecCC----CchhHHHhhhcccccccCCC
Q 016413 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKK----GQDAERFLSATFADLPAPDL 107 (390)
Q Consensus 32 ~~~l~~~GG~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 107 (390)
.+.||++||. .. ++++++|||.+++|..+++++.+ |..++++++++. |.... ....+++.||+.++
T Consensus 11 ~~~l~~~GG~-~~-----~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~lyv~GG~~~-~~~~~~~~~d~~~~ 80 (306)
T 3ii7_A 11 HDYRIALFGG-SQ-----PQSCRYFNPKDYSWTDIRCPFEK---RRDAACVFWDNVVYILGGSQL-FPIKRMDCYNVVKD 80 (306)
T ss_dssp CCEEEEEECC-SS-----TTSEEEEETTTTEEEECCCCSCC---CBSCEEEEETTEEEEECCBSS-SBCCEEEEEETTTT
T ss_pred cceEEEEeCC-CC-----CceEEEecCCCCCEecCCCCCcc---cceeEEEEECCEEEEEeCCCC-CCcceEEEEeCCCC
Confidence 5899999998 21 68999999999999999998877 999999888766 22222 23348999999999
Q ss_pred CeEECCCCCCcCCCceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEece
Q 016413 108 EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQ 187 (390)
Q Consensus 108 ~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~ 187 (390)
+|+.++++|.+|..|++++++++|||+||.+.....++++++||+.+++|+.++++|. +|..|++++.+++||++||.
T Consensus 81 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~ 158 (306)
T 3ii7_A 81 SWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLT--QRCSHGMVEANGLIYVCGGS 158 (306)
T ss_dssp EEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSS--CCBSCEEEEETTEEEEECCE
T ss_pred eEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcC--CcceeEEEEECCEEEEECCC
Confidence 9999999999999999999999999999997555567899999999999999999887 58899999999999999998
Q ss_pred eCCCC-CCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEc
Q 016413 188 YGPQC-RGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTE 266 (390)
Q Consensus 188 ~~~~~-~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 266 (390)
+.... ....+++++||+++++|+.+++||.+|..|++++++++|||+||.........+++|| +.+++|+.+
T Consensus 159 ~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd-------~~~~~W~~~ 231 (306)
T 3ii7_A 159 LGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYD-------IKLNEWKMV 231 (306)
T ss_dssp ESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEE-------TTTTEEEEC
T ss_pred CCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEee-------CCCCcEEEC
Confidence 76532 0127899999999999999999999999999999999999999987665556666666 789999999
Q ss_pred cCCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCCCCCCcceeE
Q 016413 267 IPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHIECA 342 (390)
Q Consensus 267 ~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~~~~~~~ 342 (390)
+++|.+|..+++++++++|||+||.++. ..++++++|| .+++|+.++++|.+|..++++
T Consensus 232 ~~~p~~r~~~~~~~~~~~i~v~GG~~~~-----------------~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~ 291 (306)
T 3ii7_A 232 SPMPWKGVTVKCAAVGSIVYVLAGFQGV-----------------GRLGHILEYNTETDKWVANSKVRAFPVTSCLI 291 (306)
T ss_dssp CCCSCCBSCCEEEEETTEEEEEECBCSS-----------------SBCCEEEEEETTTTEEEEEEEEECCSCTTCEE
T ss_pred CCCCCCccceeEEEECCEEEEEeCcCCC-----------------eeeeeEEEEcCCCCeEEeCCCcccccceeEEE
Confidence 9999999999999999999999998754 2467899999 788999999999999887653
No 6
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.9e-45 Score=336.28 Aligned_cols=254 Identities=19% Similarity=0.296 Sum_probs=224.7
Q ss_pred hcccccccCCCCeEECCCCCCcCCCceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE
Q 016413 97 ATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (390)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~ 176 (390)
.++++||+.+++|+.++++|.+|..|++++++++|||+||.+... .++++++||+.+++|+.+++||. +|..|++++
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~ 106 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSL-RVRTVDSYDPVKDQWTSVANMRD--RRSTLGAAV 106 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSS-BCCCEEEEETTTTEEEEECCCSS--CCBSCEEEE
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCc-cccceEEECCCCCceeeCCCCCc--cccceEEEE
Confidence 379999999999999999999999999999999999999987654 46889999999999999999887 588999999
Q ss_pred eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCC--CCCCcceEEeeee
Q 016413 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENR--HTPGLEHWSIAVK 254 (390)
Q Consensus 177 ~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~--~~~~~~~~~~~~~ 254 (390)
++++||++||.++.. .++++++||+.+++|+.+++||.+|..|++++++++|||+||..... ....+++||
T Consensus 107 ~~~~iyv~GG~~~~~---~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd---- 179 (302)
T 2xn4_A 107 LNGLLYAVGGFDGST---GLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYN---- 179 (302)
T ss_dssp ETTEEEEEEEECSSC---EEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEE----
T ss_pred ECCEEEEEcCCCCCc---cCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEe----
Confidence 999999999987643 47899999999999999999999999999999999999999986542 355566666
Q ss_pred ccccccCCeEEccCCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCC
Q 016413 255 DGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMP 333 (390)
Q Consensus 255 ~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~ 333 (390)
+.+++|+.++++|.+|..+++++++++|||+||.++. ..++++++|| .+++|+.++++|
T Consensus 180 ---~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-----------------~~~~~~~~yd~~~~~W~~~~~~~ 239 (302)
T 2xn4_A 180 ---ATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGP-----------------LVRKSVEVYDPTTNAWRQVADMN 239 (302)
T ss_dssp ---TTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSS-----------------SBCCCEEEEETTTTEEEEECCCS
T ss_pred ---CCCCcEEECCCCccccccccEEEECCEEEEECCCCCC-----------------cccceEEEEeCCCCCEeeCCCCC
Confidence 6899999999999999999999999999999998653 2457899999 788999999999
Q ss_pred CCCCcceeEEEEECCEEEEEcCCCCCCCcceeeEEeeeEEEeecCccceeecc-CCC
Q 016413 334 KPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLVIIYHY-RPP 389 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~-~~P 389 (390)
.+|..+ +++.++++|||+||.+... .++++++||+++++|..++ .+|
T Consensus 240 ~~r~~~--~~~~~~~~i~v~GG~~~~~-------~~~~v~~yd~~~~~W~~~~~~~~ 287 (302)
T 2xn4_A 240 MCRRNA--GVCAVNGLLYVVGGDDGSC-------NLASVEYYNPTTDKWTVVSSCMS 287 (302)
T ss_dssp SCCBSC--EEEEETTEEEEECCBCSSS-------BCCCEEEEETTTTEEEECSSCCS
T ss_pred CccccC--eEEEECCEEEEECCcCCCc-------ccccEEEEcCCCCeEEECCcccC
Confidence 988755 4578899999999987654 4678999999999999997 666
No 7
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=8e-45 Score=336.99 Aligned_cols=246 Identities=15% Similarity=0.253 Sum_probs=206.3
Q ss_pred CCcCCCceEEEECCEEEEEecCC-----CCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCC
Q 016413 116 PVPRLDGAAIQIKNLFYVFAGYG-----SLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGP 190 (390)
Q Consensus 116 ~~~R~~~~~~~~~~~lyv~GG~~-----~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~ 190 (390)
|.+|..|++++++++|||+||.. ......+++++||+.+++|+.++++|. +|..|++++++++|||+||.+..
T Consensus 33 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~~~lyv~GG~~~~ 110 (315)
T 4asc_A 33 QVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPS--PRCLFGLGEALNSIYVVGGREIK 110 (315)
T ss_dssp CSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSS--CEESCEEEEETTEEEEECCEESS
T ss_pred CCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCc--chhceeEEEECCEEEEEeCCcCC
Confidence 45789999999999999999962 222345679999999999999999887 68999999999999999998742
Q ss_pred CCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEccC-CCCCCCCCcceEEeeeeccccccCCeEEccCC
Q 016413 191 QCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGS-KENRHTPGLEHWSIAVKDGKALEKAWRTEIPI 269 (390)
Q Consensus 191 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~-~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 269 (390)
......+++++||+.+++|+.++++|.+|..|++++++++|||+||. ......+++++|| +.+++|+.++++
T Consensus 111 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd-------~~~~~W~~~~~~ 183 (315)
T 4asc_A 111 DGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYD-------PKKFEWKELAPM 183 (315)
T ss_dssp TTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEE-------TTTTEEEECCCC
T ss_pred CCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEe-------CCCCeEEECCCC
Confidence 22256899999999999999999999999999999999999999998 4445566777776 689999999999
Q ss_pred CCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCCCCCCcceeEEEEECC
Q 016413 270 PRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHIECAWVIVNN 348 (390)
Q Consensus 270 p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~~~~~~~~~~~~~ 348 (390)
|.+|..+++++++++|||+||.+.. ..++++++|| .+++|+.++++|.+|..+ +++.+++
T Consensus 184 p~~r~~~~~~~~~~~iyv~GG~~~~-----------------~~~~~~~~yd~~~~~W~~~~~~p~~r~~~--~~~~~~~ 244 (315)
T 4asc_A 184 QTARSLFGATVHDGRIIVAAGVTDT-----------------GLTSSAEVYSITDNKWAPFEAFPQERSSL--SLVSLVG 244 (315)
T ss_dssp SSCCBSCEEEEETTEEEEEEEECSS-----------------SEEEEEEEEETTTTEEEEECCCSSCCBSC--EEEEETT
T ss_pred CCchhceEEEEECCEEEEEeccCCC-----------------CccceEEEEECCCCeEEECCCCCCcccce--eEEEECC
Confidence 9999999999999999999998654 2467899999 788999999999998865 4578899
Q ss_pred EEEEEcCCCCCCC--cceeeEEeeeEEEeecCccceeeccCCC
Q 016413 349 SIIITGGTTEKHP--MTKRMILVGEVFQFHLDSLVIIYHYRPP 389 (390)
Q Consensus 349 ~l~v~GG~~~~~~--~~~~~~~~~~v~~yd~~~~~W~~v~~~P 389 (390)
+|||+||.+.... .......++++++||+++++|+.+...|
T Consensus 245 ~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~ 287 (315)
T 4asc_A 245 TLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLREI 287 (315)
T ss_dssp EEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEESCS
T ss_pred EEEEECCccccCcCCccccccccCcEEEecCCCChhhhhccCC
Confidence 9999999864210 0111236789999999999999985554
No 8
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=4e-44 Score=332.76 Aligned_cols=289 Identities=17% Similarity=0.329 Sum_probs=232.0
Q ss_pred hccEEEEecCCCCCCCccccceeeeeccCCCceEeecCCCCCccccccceEEEecCC----Cc---hh--H-HHhhhccc
Q 016413 31 IADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKK----GQ---DA--E-RFLSATFA 100 (390)
Q Consensus 31 ~~~~l~~~GG~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~----~~---~~--~-~~~~~~~~ 100 (390)
..+.||++||. .+++|||.+++|... +++. |..|..+++++.++. |. .. . ..+..+++
T Consensus 14 ~~~~i~~~GG~----------~~~~yd~~~~~W~~~-~~~~-~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~ 81 (318)
T 2woz_A 14 VKDLILLVNDT----------AAVAYDPMENECYLT-ALAE-QIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFF 81 (318)
T ss_dssp EEEEEEEECSS----------EEEEEETTTTEEEEE-EECT-TSCSSEEEEECSSSCEEEEESSCC-------CCCBEEE
T ss_pred ecchhhhcccc----------ceEEECCCCCceecc-cCCc-cCCccceEEEEECCEEEEECCcccCccccCCCccccEE
Confidence 46899999996 478999999999984 3332 234877877766555 11 11 1 12333589
Q ss_pred ccccCCCCeEECCCCCCcCCCceEEEECCEEEEEecCCC-CCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCC
Q 016413 101 DLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGS-LDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGR 179 (390)
Q Consensus 101 ~~~~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~-~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~ 179 (390)
.||+.+++|+.++++|.+|..|++++++++|||+||.+. ....++++++||+.+++|+.++++|. +|..|++++.++
T Consensus 82 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~ 159 (318)
T 2woz_A 82 QLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPI--KVYGHNVISHNG 159 (318)
T ss_dssp EEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSS--CEESCEEEEETT
T ss_pred EEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCC--cccccEEEEECC
Confidence 999999999999999999999999999999999999863 34457899999999999999998887 588999999999
Q ss_pred EEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccc
Q 016413 180 YIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKAL 259 (390)
Q Consensus 180 ~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 259 (390)
+||++||.+... ...+++++||+.+++|+.++++|.+|..|++++++++|||+||.......+.+++|| +.
T Consensus 160 ~iyv~GG~~~~~--~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd-------~~ 230 (318)
T 2woz_A 160 MIYCLGGKTDDK--KCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFD-------LK 230 (318)
T ss_dssp EEEEECCEESSS--CBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEE-------TT
T ss_pred EEEEEcCCCCCC--CccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEE-------CC
Confidence 999999986543 347899999999999999999999999999999999999999987554334444444 78
Q ss_pred cCCeEEccCCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCCCCCCc
Q 016413 260 EKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSH 338 (390)
Q Consensus 260 ~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~~~ 338 (390)
+++|+.++++|.+|..+++++++++|||+||.+.....+ ........+++++|| .+++|+.+ +|.+|..
T Consensus 231 ~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~--------~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~ 300 (318)
T 2woz_A 231 TNKWEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLES--------KEFAPTEVNDIWKYEDDKKEWAGM--LKEIRYA 300 (318)
T ss_dssp TCCEEECCCCSSCCBSCEEEEETTEEEEECCBCCBC------------CCBCCBCCCEEEEETTTTEEEEE--ESCCGGG
T ss_pred CCeEEECCCCCCcccceEEEEECCEEEEECCeeccCCCC--------ceeccceeeeEEEEeCCCCEehhh--ccccccc
Confidence 999999999999999999999999999999986531000 000113467899999 78899998 7777776
Q ss_pred ceeEEEEECCEEEEEc
Q 016413 339 IECAWVIVNNSIIITG 354 (390)
Q Consensus 339 ~~~~~~~~~~~l~v~G 354 (390)
++ ++.++++|||+.
T Consensus 301 ~~--~~~~~~~iyi~~ 314 (318)
T 2woz_A 301 SG--ASCLATRLNLFK 314 (318)
T ss_dssp TT--CEEEEEEEEGGG
T ss_pred cc--ceeeCCEEEEEE
Confidence 54 478899999874
No 9
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.3e-43 Score=334.37 Aligned_cols=306 Identities=17% Similarity=0.170 Sum_probs=225.4
Q ss_pred eecCCCCCccccccceEEEecCCCchhHHHhhhcccccccC--CCCeEECCCCC-CcCCCceEEEECCEEEEEecC-C--
Q 016413 65 VIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAP--DLEWEQMPSAP-VPRLDGAAIQIKNLFYVFAGY-G-- 138 (390)
Q Consensus 65 ~l~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~W~~~~~~~-~~R~~~~~~~~~~~lyv~GG~-~-- 138 (390)
.+++|+.+ |..++++++++.-...+.....+++.||+. +++|+.++++| .+|..|++++++++|||+||. +
T Consensus 2 ~l~~lP~~---r~~~~~~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~ 78 (357)
T 2uvk_A 2 VLPETPVP---FKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNS 78 (357)
T ss_dssp CSCCCSSC---CCSCEEEEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECT
T ss_pred CCCCCCcc---ccceEEEEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCC
Confidence 45667666 888887777665222222223489999997 48999999999 899999999999999999998 3
Q ss_pred -CCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCC--------------------------
Q 016413 139 -SLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQ-------------------------- 191 (390)
Q Consensus 139 -~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~-------------------------- 191 (390)
.....++++++||+.+++|+.+++|+ |.+|..|++++.+++|||+||.+...
T Consensus 79 ~~~~~~~~~v~~yd~~~~~W~~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (357)
T 2uvk_A 79 EGLTQVFNDVHKYNPKTNSWVKLMSHA-PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYF 157 (357)
T ss_dssp TSCEEECCCEEEEETTTTEEEECSCCC-SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CccceeeccEEEEeCCCCcEEECCCCC-CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhc
Confidence 22345789999999999999999998 55799999999999999999976431
Q ss_pred -----CCCCCceEEEEECCCCCeEeCCCCCCCCCC-ceEEEECCEEEEEccCCCCC-CCCCcceEEeeeeccccccCCeE
Q 016413 192 -----CRGPTSRTFVLDSETRKWDSIPPLPSPRYS-PATQLWRGRLHVMGGSKENR-HTPGLEHWSIAVKDGKALEKAWR 264 (390)
Q Consensus 192 -----~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~-~~~~~~~~~~~~~~~~~~~~~W~ 264 (390)
....++++++||+.+++|+.++++|.+|.. |++++++++|||+||..... ....+.+ |++|+.+++|+
T Consensus 158 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~-----~d~d~~~~~W~ 232 (357)
T 2uvk_A 158 DKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFE-----LDFTGNNLKWN 232 (357)
T ss_dssp SSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEE-----EECC---CEEE
T ss_pred cccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEE-----EEecCCCCcEE
Confidence 001368999999999999999999987655 99999999999999975432 2333333 44457999999
Q ss_pred EccCCC--CCCCceeEEEECCEEEEEcCCCCCCCCC--CCCCccccccccceecCcEEeeC-CCCCeEECCCCCCCCCcc
Q 016413 265 TEIPIP--RGGPHRACFVFNDRLFVVGGQEGDFMAK--PGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHI 339 (390)
Q Consensus 265 ~~~~~p--~~~~~~~~~~~~~~iyv~GG~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~~~~ 339 (390)
.++++| +.+..+++++++++|||+||.+...... ..+..+. ......+.++++|| .+++|+.++++|.+|..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~ 310 (357)
T 2uvk_A 233 KLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYA--HEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYG 310 (357)
T ss_dssp ECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSST--TTTCCCEECCEEEECC---CEEEEECSSCCBSS
T ss_pred ecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceec--cccccceeeEEEEecCCCceeeCCCCCCCcccc
Confidence 998775 4456677999999999999965321000 0000000 00011245799999 788999999999998865
Q ss_pred eeEEEEECCEEEEEcCCCCCCCcceeeEEeeeEEEeecCccceeeccCCC
Q 016413 340 ECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLVIIYHYRPP 389 (390)
Q Consensus 340 ~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~P 389 (390)
+++.++++|||+||.+.... .++++++|+.++++|.+....|
T Consensus 311 --~~~~~~~~i~v~GG~~~~~~------~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 311 --VSLPWNNSLLIIGGETAGGK------AVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp --EEEEETTEEEEEEEECGGGC------EEEEEEEEEC-CCSCEEEC---
T ss_pred --eeEEeCCEEEEEeeeCCCCC------EeeeEEEEEEcCcEeEeeeccc
Confidence 45789999999999987654 6789999999999999987766
No 10
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=3.5e-43 Score=324.90 Aligned_cols=252 Identities=17% Similarity=0.263 Sum_probs=219.9
Q ss_pred ccCCCceEeecCCCCCccccccceEEEecCC----Cch----hHHHhhhcccccccCCCCeEECCCCCCcCCCceEEEEC
Q 016413 57 ALEKSGVVVIPHVNATKIDRQRESVAVIDKK----GQD----AERFLSATFADLPAPDLEWEQMPSAPVPRLDGAAIQIK 128 (390)
Q Consensus 57 d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~~ 128 (390)
|+.+++|..++.++.+ |..++++++++. |.. .......+++.||+.+++|+.++++|.+|..|++++++
T Consensus 45 d~~~~~W~~~~~~p~~---r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~ 121 (308)
T 1zgk_A 45 NPSNGTWLRLADLQVP---RSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVID 121 (308)
T ss_dssp ETTTTEEEECCCCSSC---CBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEET
T ss_pred cCCCCeEeECCCCCcc---cccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEEC
Confidence 6789999999988877 999988887665 221 11123348999999999999999999999999999999
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCCC
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK 208 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 208 (390)
++|||+||.+... .++++++||+.+++|+.++++|. +|..+++++++++||++||.++... .+++++||+.+++
T Consensus 122 ~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~---~~~~~~yd~~~~~ 195 (308)
T 1zgk_A 122 GHIYAVGGSHGCI-HHNSVERYEPERDEWHLVAPMLT--RRIGVGVAVLNRLLYAVGGFDGTNR---LNSAECYYPERNE 195 (308)
T ss_dssp TEEEEECCEETTE-ECCCEEEEETTTTEEEECCCCSS--CCBSCEEEEETTEEEEECCBCSSCB---CCCEEEEETTTTE
T ss_pred CEEEEEcCCCCCc-ccccEEEECCCCCeEeECCCCCc--cccceEEEEECCEEEEEeCCCCCCc---CceEEEEeCCCCe
Confidence 9999999987643 46889999999999999998887 5889999999999999999876543 7899999999999
Q ss_pred eEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeEEEECCEEEEE
Q 016413 209 WDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVV 288 (390)
Q Consensus 209 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~ 288 (390)
|+.+++||.+|..|++++++++|||+||........++++|| +.+++|+.++++|.+|..+++++++++|||+
T Consensus 196 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd-------~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~ 268 (308)
T 1zgk_A 196 WRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYD-------VETETWTFVAPMKHRRSALGITVHQGRIYVL 268 (308)
T ss_dssp EEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEE-------TTTTEEEECCCCSSCCBSCEEEEETTEEEEE
T ss_pred EeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEe-------CCCCcEEECCCCCCCccceEEEEECCEEEEE
Confidence 999999999999999999999999999998766666777777 6899999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCCCCCCccee
Q 016413 289 GGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHIEC 341 (390)
Q Consensus 289 GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~~~~~~ 341 (390)
||.++. ..++++++|| .+++|+.+++||.+|..+++
T Consensus 269 GG~~~~-----------------~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 305 (308)
T 1zgk_A 269 GGYDGH-----------------TFLDSVECYDPDTDTWSEVTRMTSGRSGVGV 305 (308)
T ss_dssp CCBCSS-----------------CBCCEEEEEETTTTEEEEEEECSSCCBSCEE
T ss_pred cCcCCC-----------------cccceEEEEcCCCCEEeecCCCCCCccccee
Confidence 998653 2567899999 78899999999999987755
No 11
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2.1e-42 Score=321.07 Aligned_cols=259 Identities=18% Similarity=0.278 Sum_probs=214.8
Q ss_pred cccccccCCCCeEECCC-CCCcCCCceEEEECCEEEEEecCCCC-----CCCCCeEEEEeCCCCceeecCCCCCCCCCcc
Q 016413 98 TFADLPAPDLEWEQMPS-APVPRLDGAAIQIKNLFYVFAGYGSL-----DYVHSHVDVYNFTDNKWVDRFDMPKDMAHSH 171 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~-~~~~R~~~~~~~~~~~lyv~GG~~~~-----~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~ 171 (390)
.++.||+.+++|...+. .+.+|..|++++++++|||+||.... ....+++++||+.+++|+.+++||. +|..
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~ 102 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPS--ARCL 102 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSS--CBCS
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCc--cccc
Confidence 47899999999988432 34789999999999999999996321 1234569999999999999999887 5889
Q ss_pred eEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCC-CCCCCCcceEE
Q 016413 172 LGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKE-NRHTPGLEHWS 250 (390)
Q Consensus 172 ~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~~ 250 (390)
|++++++++|||+||.+.... ...+++++||+.+++|+.++++|.+|..|++++++++|||+||... ....+++++||
T Consensus 103 ~~~~~~~~~iyv~GG~~~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd 181 (318)
T 2woz_A 103 FGLGEVDDKIYVVAGKDLQTE-ASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYN 181 (318)
T ss_dssp CEEEEETTEEEEEEEEBTTTC-CEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEE
T ss_pred cceEEECCEEEEEcCccCCCC-cccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEc
Confidence 999999999999999874222 4579999999999999999999999999999999999999999743 33456667776
Q ss_pred eeeeccccccCCeEEccCCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEEC
Q 016413 251 IAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVL 329 (390)
Q Consensus 251 ~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~ 329 (390)
+.+++|+.++++|.+|..+++++++++|||+||.+.. ..++++++|| .+++|+.+
T Consensus 182 -------~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-----------------~~~~~~~~yd~~~~~W~~~ 237 (318)
T 2woz_A 182 -------PKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTED-----------------GLSASVEAFDLKTNKWEVM 237 (318)
T ss_dssp -------TTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETT-----------------EEEEEEEEEETTTCCEEEC
T ss_pred -------CCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCC-----------------CccceEEEEECCCCeEEEC
Confidence 6899999999999999999999999999999998653 3567899999 78899999
Q ss_pred CCCCCCCCcceeEEEEECCEEEEEcCCCCCCCcc--eeeEEeeeEEEeecCccceeec
Q 016413 330 PPMPKPNSHIECAWVIVNNSIIITGGTTEKHPMT--KRMILVGEVFQFHLDSLVIIYH 385 (390)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~--~~~~~~~~v~~yd~~~~~W~~v 385 (390)
+++|.+|..+ +++.++++|||+||.+...... ......+++++||+++++|+.+
T Consensus 238 ~~~p~~r~~~--~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 238 TEFPQERSSI--SLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp CCCSSCCBSC--EEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CCCCCcccce--EEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 9999988765 5588999999999987532100 0011467999999999999988
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=314.44 Aligned_cols=236 Identities=19% Similarity=0.279 Sum_probs=196.3
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEECCEEEEEecCCC--CCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEE
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGS--LDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV 175 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~--~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~ 175 (390)
+++.||+.+++|+.++++|.+|..|++++++++|||+||.+. ....++++++||+.+++|+.++++|. +|..|+++
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~ 145 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPY--VVYGHTVL 145 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSS--CCBSCEEE
T ss_pred ceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCC--cccceeEE
Confidence 577888888888888889999999999999999999999752 34467899999999999999999887 58999999
Q ss_pred EeCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeec
Q 016413 176 SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKD 255 (390)
Q Consensus 176 ~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~ 255 (390)
+.+++|||+||.+... ...+++++||+.+++|+.+++||.+|..|++++++++|||+||.......+.+++||
T Consensus 146 ~~~~~iyv~GG~~~~~--~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd----- 218 (315)
T 4asc_A 146 SHMDLVYVIGGKGSDR--KCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYS----- 218 (315)
T ss_dssp EETTEEEEECCBCTTS--CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEE-----
T ss_pred EECCEEEEEeCCCCCC--cccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEE-----
Confidence 9999999999985433 458999999999999999999999999999999999999999987654444455555
Q ss_pred cccccCCeEEccCCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCCC
Q 016413 256 GKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPK 334 (390)
Q Consensus 256 ~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~ 334 (390)
+.+++|+.++++|.+|..+++++++++|||+||.+.....+ .......++++++|| .+++|+.+ ++.
T Consensus 219 --~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~--------~~~~~~~~~~v~~yd~~~~~W~~~--~~~ 286 (315)
T 4asc_A 219 --ITDNKWAPFEAFPQERSSLSLVSLVGTLYAIGGFATLETES--------GELVPTELNDIWRYNEEEKKWEGV--LRE 286 (315)
T ss_dssp --TTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTT--------SCEEEEEEEEEEEEETTTTEEEEE--ESC
T ss_pred --CCCCeEEECCCCCCcccceeEEEECCEEEEECCccccCcCC--------ccccccccCcEEEecCCCChhhhh--ccC
Confidence 78999999999999999999999999999999975321000 001113577899999 78899999 666
Q ss_pred CCCcceeEEEEECCEEEEEcCC
Q 016413 335 PNSHIECAWVIVNNSIIITGGT 356 (390)
Q Consensus 335 ~~~~~~~~~~~~~~~l~v~GG~ 356 (390)
||..++ +++++++||++...
T Consensus 287 ~r~~~~--~~~~~~~l~v~~~~ 306 (315)
T 4asc_A 287 IAYAAG--ATFLPVRLNVLRLT 306 (315)
T ss_dssp SSCCSS--CEEEEEEECGGGSE
T ss_pred CcCccc--eEEeCCEEEEEEeh
Confidence 676554 57899999998664
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=8.7e-41 Score=315.12 Aligned_cols=275 Identities=15% Similarity=0.198 Sum_probs=215.1
Q ss_pred HHHHHHhhccEEEEecCCCCCCCccccceeeeeccC--CCceEeecCCC-CCccccccceEEEecCC----Cch-h----
Q 016413 24 GLLGAALIADFMWASSSSSFSSSSAHLSVASNWALE--KSGVVVIPHVN-ATKIDRQRESVAVIDKK----GQD-A---- 91 (390)
Q Consensus 24 ~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~~~~d~~--~~~W~~l~~~~-~~p~~r~~~~~~~~~~~----~~~-~---- 91 (390)
..|++++++++||++||. .+ +++++||+. +++|..+++|+ .+ |..++++++++. |.. .
T Consensus 11 ~~~~~~~~~~~iyv~GG~-~~------~~~~~~d~~~~~~~W~~~~~~p~~~---R~~~~~~~~~~~lyv~GG~~~~~~~ 80 (357)
T 2uvk_A 11 KSGTGAIDNDTVYIGLGS-AG------TAWYKLDTQAKDKKWTALAAFPGGP---RDQATSAFIDGNLYVFGGIGKNSEG 80 (357)
T ss_dssp CSCEEEEETTEEEEECGG-GT------TCEEEEETTSSSCCEEECCCCTTCC---CBSCEEEEETTEEEEECCEEECTTS
T ss_pred cceEEEEECCEEEEEeCc-CC------CeEEEEccccCCCCeeECCCCCCCc---CccceEEEECCEEEEEcCCCCCCCc
Confidence 346677889999999998 32 379999997 58999999988 67 999999888766 221 1
Q ss_pred HHHhhhcccccccCCCCeEECCCCC-CcCCCceEEEECCEEEEEecCCCCC-----------------------------
Q 016413 92 ERFLSATFADLPAPDLEWEQMPSAP-VPRLDGAAIQIKNLFYVFAGYGSLD----------------------------- 141 (390)
Q Consensus 92 ~~~~~~~~~~~~~~~~~W~~~~~~~-~~R~~~~~~~~~~~lyv~GG~~~~~----------------------------- 141 (390)
......+++.||+.+++|+++++++ .+|..|++++++++|||+||.+...
T Consensus 81 ~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (357)
T 2uvk_A 81 LTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKK 160 (357)
T ss_dssp CEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSC
T ss_pred cceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcccc
Confidence 1122348999999999999999988 9999999999999999999986432
Q ss_pred ----CCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEEC--CCCCeEeCCCC
Q 016413 142 ----YVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDS--ETRKWDSIPPL 215 (390)
Q Consensus 142 ----~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~--~~~~W~~~~~~ 215 (390)
..++++++||+.+++|+.++++|.+ +|..+++++.+++|||+||.+... ...+++++||+ ++++|+.+++|
T Consensus 161 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-~~~~~~~~~~~~~iyv~GG~~~~~--~~~~~v~~~d~d~~~~~W~~~~~~ 237 (357)
T 2uvk_A 161 AEDYFFNKFLLSFDPSTQQWSYAGESPWY-GTAGAAVVNKGDKTWLINGEAKPG--LRTDAVFELDFTGNNLKWNKLAPV 237 (357)
T ss_dssp GGGGCCCCEEEEEETTTTEEEEEEECSSC-CCBSCEEEEETTEEEEECCEEETT--EECCCEEEEECC---CEEEECCCS
T ss_pred ccccCCcccEEEEeCCCCcEEECCCCCCC-CcccccEEEECCEEEEEeeecCCC--cccCceEEEEecCCCCcEEecCCC
Confidence 2468999999999999999988874 356689999999999999987653 23678999986 99999999988
Q ss_pred CCC--CCCceEEEECCEEEEEccCCCCC-----------------CCCCcceEEeeeeccccccCCeEEccCCCCCCCce
Q 016413 216 PSP--RYSPATQLWRGRLHVMGGSKENR-----------------HTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHR 276 (390)
Q Consensus 216 p~~--r~~~~~~~~~~~iyv~GG~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~ 276 (390)
|.+ |..|++++++++|||+||..... ....+++|| +.+++|+.++++|.+|..+
T Consensus 238 ~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd-------~~~~~W~~~~~~p~~r~~~ 310 (357)
T 2uvk_A 238 SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHL-------WHNGKWDKSGELSQGRAYG 310 (357)
T ss_dssp STTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEE-------CC---CEEEEECSSCCBSS
T ss_pred CCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEe-------cCCCceeeCCCCCCCcccc
Confidence 766 45778999999999999964321 112334444 7899999999999999999
Q ss_pred eEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCCC
Q 016413 277 ACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPK 334 (390)
Q Consensus 277 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~ 334 (390)
++++++++|||+||.+... ..++++++|+ .+++|....++|.
T Consensus 311 ~~~~~~~~i~v~GG~~~~~----------------~~~~~v~~l~~~~~~~~~~~~~~~ 353 (357)
T 2uvk_A 311 VSLPWNNSLLIIGGETAGG----------------KAVTDSVLITVKDNKVTVQNLEHH 353 (357)
T ss_dssp EEEEETTEEEEEEEECGGG----------------CEEEEEEEEEC-CCSCEEEC----
T ss_pred eeEEeCCEEEEEeeeCCCC----------------CEeeeEEEEEEcCcEeEeeecccc
Confidence 9999999999999987542 3468899999 8999999877664
No 14
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=5.6e-40 Score=302.22 Aligned_cols=276 Identities=17% Similarity=0.306 Sum_probs=239.5
Q ss_pred hhccEEEEecCCCCCCCccccceeeeeccCCCceEeecCCCCCccccccceEEEecCC-----CchhHHHhhhccccccc
Q 016413 30 LIADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKK-----GQDAERFLSATFADLPA 104 (390)
Q Consensus 30 ~~~~~l~~~GG~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 104 (390)
.+++.||++||..+. ...++++++||+.+++|..++.++.+ |..+++++.++. |.... ....+++.||+
T Consensus 12 ~~~~~i~~~GG~~~~--~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~l~v~GG~~~~-~~~~~~~~~d~ 85 (301)
T 2vpj_A 12 GANEVLLVVGGFGSQ--QSPIDVVEKYDPKTQEWSFLPSITRK---RRYVASVSLHDRIYVIGGYDGR-SRLSSVECLDY 85 (301)
T ss_dssp -CCEEEEEECCEETT--TEECCCEEEEETTTTEEEECCCCSSC---CBSCEEEEETTEEEEECCBCSS-CBCCCEEEEET
T ss_pred cCCCEEEEEeCccCC--CcceeEEEEEcCCCCeEEeCCCCChh---hccccEEEECCEEEEEcCCCCC-ccCceEEEEEC
Confidence 378999999994244 56789999999999999999988777 999988887665 22222 23348999999
Q ss_pred CCCC---eEECCCCCCcCCCceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEE
Q 016413 105 PDLE---WEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYI 181 (390)
Q Consensus 105 ~~~~---W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~i 181 (390)
.+++ |+.++++|.+|..|++++++++|||+||.+... .++++++||+.+++|+.++++|. +|..|++++.+++|
T Consensus 86 ~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~~~i 162 (301)
T 2vpj_A 86 TADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSR-RHTSMERYDPNIDQWSMLGDMQT--AREGAGLVVASGVI 162 (301)
T ss_dssp TCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSC-BCCEEEEEETTTTEEEEEEECSS--CCBSCEEEEETTEE
T ss_pred CCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCc-ccceEEEEcCCCCeEEECCCCCC--CcccceEEEECCEE
Confidence 9999 999999999999999999999999999998654 47899999999999999998887 58899999999999
Q ss_pred EEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccC
Q 016413 182 YIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEK 261 (390)
Q Consensus 182 yv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (390)
|++||.++.. ..+++++||+.+++|+.++++|.+|..|++++++++|||+||.......+.+++|| +.++
T Consensus 163 yv~GG~~~~~---~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd-------~~~~ 232 (301)
T 2vpj_A 163 YCLGGYDGLN---ILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYN-------IRTD 232 (301)
T ss_dssp EEECCBCSSC---BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEE-------TTTT
T ss_pred EEECCCCCCc---ccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEe-------CCCC
Confidence 9999987653 47899999999999999999999999999999999999999998766566677776 6899
Q ss_pred CeEEccCCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCCCCCCcce
Q 016413 262 AWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHIE 340 (390)
Q Consensus 262 ~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~~~~~ 340 (390)
+|+.++++|.+|..+++++++++|||+||.++. ..++++++|| .+++|+.+++||.+|..++
T Consensus 233 ~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~-----------------~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~ 295 (301)
T 2vpj_A 233 SWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGN-----------------SLLSSIECYDPIIDSWEVVTSMGTQRCDAG 295 (301)
T ss_dssp EEEEECCCSSCCBSCEEEEETTEEEEECCBCSS-----------------SBEEEEEEEETTTTEEEEEEEEEEEEESCE
T ss_pred cEEECCCCCCcccceeEEEECCEEEEEcCcCCC-----------------cccccEEEEcCCCCeEEEcCCCCcccccce
Confidence 999999999999999999999999999998654 2456899999 7889999999999988765
Q ss_pred e
Q 016413 341 C 341 (390)
Q Consensus 341 ~ 341 (390)
+
T Consensus 296 ~ 296 (301)
T 2vpj_A 296 V 296 (301)
T ss_dssp E
T ss_pred E
Confidence 4
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=4.6e-37 Score=312.94 Aligned_cols=275 Identities=11% Similarity=0.086 Sum_probs=214.4
Q ss_pred HHHhhccEEEEecCCCCCCCccccceeeeeccCCCceEeec-CCCCCccccccceEEEecCCCchhHHHhhhcccccccC
Q 016413 27 GAALIADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIP-HVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAP 105 (390)
Q Consensus 27 ~~~~~~~~l~~~GG~~~~~~~~~~~~~~~~d~~~~~W~~l~-~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (390)
+++++++.||++||. . . ..++++++||+.+++|..++ +++.
T Consensus 392 ~~~~~~~~iyv~GG~-~--~-~~~~~v~~yd~~~~~W~~~~~~~p~---------------------------------- 433 (695)
T 2zwa_A 392 DVDVAGNDVFYMGGS-N--P-YRVNEILQLSIHYDKIDMKNIEVSS---------------------------------- 433 (695)
T ss_dssp EEEECSSCEEEECCB-S--S-SBCCCEEEEEECSSCEEEEECCCCC----------------------------------
T ss_pred EEEEECCEEEEECCC-C--C-CCcCcEEEEECCCCeEEEeccCCCC----------------------------------
Confidence 445589999999998 2 2 56778888888888888877 5321
Q ss_pred CCCeEECCCCCCcCCCceEEEE--CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-CCEEE
Q 016413 106 DLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIY 182 (390)
Q Consensus 106 ~~~W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~~~iy 182 (390)
..+|.+|..|+++++ +++|||+||.+.....++++|+||+.+++|+.+++||. +|..|+++++ +++||
T Consensus 434 -------~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~--~R~~h~~~~~~~~~iy 504 (695)
T 2zwa_A 434 -------SEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH--TRFRHSACSLPDGNVL 504 (695)
T ss_dssp -------SCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB--CCBSCEEEECTTSCEE
T ss_pred -------CCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC--CcccceEEEEcCCEEE
Confidence 247889999999999 99999999998766567899999999999999999987 6889999996 99999
Q ss_pred EEeceeCCCCCCCCceEEEEECCCCCeEeCCC---CCCCCCCceEEEEC---CEEEEEccCCCC--CCCCCcceEEeeee
Q 016413 183 IVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP---LPSPRYSPATQLWR---GRLHVMGGSKEN--RHTPGLEHWSIAVK 254 (390)
Q Consensus 183 v~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~---~~iyv~GG~~~~--~~~~~~~~~~~~~~ 254 (390)
|+||.+... ++++||+.+++|+.+++ +|.+|..|++++++ ++|||+||.... ...+.+++|+
T Consensus 505 v~GG~~~~~------~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd---- 574 (695)
T 2zwa_A 505 ILGGVTEGP------AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFK---- 574 (695)
T ss_dssp EECCBCSSC------SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEE----
T ss_pred EECCCCCCC------CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEE----
Confidence 999986542 89999999999999986 89999999988877 899999998543 3455666666
Q ss_pred ccccccCC------eEEccCC-CCCCCceeEEEEC-CEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCC
Q 016413 255 DGKALEKA------WRTEIPI-PRGGPHRACFVFN-DRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMK 325 (390)
Q Consensus 255 ~~~~~~~~------W~~~~~~-p~~~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~ 325 (390)
+.+++ |+.+.++ +.+|..+++++++ ++|||+||.+.... ....+++++|| .+++
T Consensus 575 ---~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~--------------~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 575 ---YDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL--------------FDRTNSIISLDPLSET 637 (695)
T ss_dssp ---ECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCC--------------CCTTTSEEEEETTTTE
T ss_pred ---ccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCC--------------CCCCCeEEEEECCCCe
Confidence 57888 8988775 4788888999999 99999999864321 02467899999 7889
Q ss_pred eEECCCCCC-------CCCcceeEEEEECC-EEEEEcCCCCCCCcceeeEEeeeEEEeecCcc
Q 016413 326 WKVLPPMPK-------PNSHIECAWVIVNN-SIIITGGTTEKHPMTKRMILVGEVFQFHLDSL 380 (390)
Q Consensus 326 W~~~~~~~~-------~~~~~~~~~~~~~~-~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 380 (390)
|+.++ +|. | .+++++++.+++ +|||+||...--.. +..++++|.+|+..+
T Consensus 638 W~~~~-~p~~~~~~~~p-~~~gh~~~~~~~g~i~v~GGg~~cfsf---Gt~~n~i~~ldl~~~ 695 (695)
T 2zwa_A 638 LTSIP-ISRRIWEDHSL-MLAGFSLVSTSMGTIHIIGGGATCYGF---GSVTNVGLKLIAIAK 695 (695)
T ss_dssp EEECC-CCHHHHHHSCC-CCSSCEEECC---CEEEECCEEECTTS---CEEECCCEEEEECCC
T ss_pred EEEee-ccccccCCCCc-cceeeeEEEeCCCEEEEEeCCccCcCc---cccccceEEEEEEcC
Confidence 99653 321 2 233445566555 99999995322110 126779999998653
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=5e-35 Score=297.97 Aligned_cols=242 Identities=14% Similarity=0.187 Sum_probs=195.0
Q ss_pred CeEECCCCCCcCCCceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecC-CCC---CCCCCcceEEEEe--CCEE
Q 016413 108 EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF-DMP---KDMAHSHLGVVSD--GRYI 181 (390)
Q Consensus 108 ~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~-~l~---~~~~r~~~~~~~~--~~~i 181 (390)
+|...+..|.+|.++ +++++++|||+||.+. ..++++++||+.+++|+.++ ++| .|.+|.+|+++++ +++|
T Consensus 378 ~~~~~~~~p~rr~g~-~~~~~~~iyv~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~l 454 (695)
T 2zwa_A 378 QLLECECPINRKFGD-VDVAGNDVFYMGGSNP--YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQL 454 (695)
T ss_dssp EEEECCCTTCCBSCE-EEECSSCEEEECCBSS--SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEE
T ss_pred eEeccCCCCCCceeE-EEEECCEEEEECCCCC--CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEE
Confidence 355555556555554 4558999999999876 45788999999999999998 643 3447999999999 9999
Q ss_pred EEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEE-CCEEEEEccCCCCCCCCCcceEEeeeecccccc
Q 016413 182 YIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALE 260 (390)
Q Consensus 182 yv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 260 (390)
||+||.+... ..++++++||+.+++|+.+++||.+|..|+++++ +++|||+||..... .+++|| +.+
T Consensus 455 yv~GG~~~~~--~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd-------~~t 522 (695)
T 2zwa_A 455 LLIGGRKAPH--QGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYN-------VTE 522 (695)
T ss_dssp EEECCBSSTT--CBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEE-------TTT
T ss_pred EEEcCCCCCC--CccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEE-------CCC
Confidence 9999987654 2478999999999999999999999999999997 99999999987544 555555 799
Q ss_pred CCeEEccC---CCCCCCceeEEEEC---CEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCC------eE
Q 016413 261 KAWRTEIP---IPRGGPHRACFVFN---DRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMK------WK 327 (390)
Q Consensus 261 ~~W~~~~~---~p~~~~~~~~~~~~---~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~------W~ 327 (390)
++|+.+++ +|.+|..+++++++ ++|||+||..... ...++++++|| .+++ |+
T Consensus 523 ~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~---------------~~~~~~v~~yd~~~~~w~~~~~W~ 587 (695)
T 2zwa_A 523 EIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQ---------------TTVSDKAIIFKYDAENATEPITVI 587 (695)
T ss_dssp TEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTS---------------SCBCCEEEEEEECTTCSSCCEEEE
T ss_pred CceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCC---------------CeeeCcEEEEEccCCccccceEEE
Confidence 99999986 88899988888877 8999999985431 13567899999 7788 89
Q ss_pred ECCCC-CCCCCcceeEEEEEC-CEEEEEcCCCCCCCcceeeEEeeeEEEeecCccceeec
Q 016413 328 VLPPM-PKPNSHIECAWVIVN-NSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLVIIYH 385 (390)
Q Consensus 328 ~~~~~-~~~~~~~~~~~~~~~-~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v 385 (390)
.++++ +.+|..+ ++++++ ++|||+||.+..... ...+++++||+++++|..+
T Consensus 588 ~~~~~p~~~R~~~--~~~~~~~~~iyv~GG~~~~~~~----~~~~~v~~yd~~t~~W~~~ 641 (695)
T 2zwa_A 588 KKLQHPLFQRYGS--QIKYITPRKLLIVGGTSPSGLF----DRTNSIISLDPLSETLTSI 641 (695)
T ss_dssp EEEECGGGCCBSC--EEEEEETTEEEEECCBCSSCCC----CTTTSEEEEETTTTEEEEC
T ss_pred EcCCCCCCCcccc--eEEEeCCCEEEEECCccCCCCC----CCCCeEEEEECCCCeEEEe
Confidence 88776 4666654 557777 999999998755321 1356899999999999965
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=4.6e-36 Score=304.88 Aligned_cols=328 Identities=13% Similarity=0.081 Sum_probs=230.4
Q ss_pred HHHHhh--ccEEEEecCCCCC---CCccccceeeeeccCCCceEeecCCCCCccccccce--EEEec-CCCchhHHHhhh
Q 016413 26 LGAALI--ADFMWASSSSSFS---SSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRES--VAVID-KKGQDAERFLSA 97 (390)
Q Consensus 26 ~~~~~~--~~~l~~~GG~~~~---~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~r~~~~--~~~~~-~~~~~~~~~~~~ 97 (390)
|+++++ +++||++||.... .....++.+++||+.+++|..++.|+.+ |..++ ++++. +.-...+.....
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~---~~~~~~~~~~~~~g~lyv~GG~~~~ 265 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTK---HDMFCPGISMDGNGQIVVTGGNDAK 265 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECS---CCCSSCEEEECTTSCEEEECSSSTT
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCC---CCCccccccCCCCCCEEEeCCCCCC
Confidence 344555 9999999997221 0012346799999999999999988776 65554 44443 331111111112
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEE-CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecC-----CCCCCCCCcc
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF-----DMPKDMAHSH 171 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~-----~l~~~~~r~~ 171 (390)
+++.||+.+++|+++++|+.+|..|+++++ +++|||+||.......++++|+||+.+++|+.++ +|+. .|..
T Consensus 266 ~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~--~~~~ 343 (656)
T 1k3i_A 266 KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLT--ADKQ 343 (656)
T ss_dssp CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCC--CCTT
T ss_pred ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccc--cccc
Confidence 799999999999999999999999999999 9999999995433445788999999999999974 3433 3433
Q ss_pred eEEEEeCCEEEEEeceeCCCC-CCCCceEEEEECCCCCeEeCC-CCCC------CCCCceEEE---ECCEEEEEccCCCC
Q 016413 172 LGVVSDGRYIYIVSGQYGPQC-RGPTSRTFVLDSETRKWDSIP-PLPS------PRYSPATQL---WRGRLHVMGGSKEN 240 (390)
Q Consensus 172 ~~~~~~~~~iyv~GG~~~~~~-~~~~~~v~~yd~~~~~W~~~~-~~p~------~r~~~~~~~---~~~~iyv~GG~~~~ 240 (390)
+++..++++|++||.++... ....+++++||++++.|.... ..+. ++..++++. .+++|||+||....
T Consensus 344 -~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~ 422 (656)
T 1k3i_A 344 -GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDY 422 (656)
T ss_dssp -GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSS
T ss_pred -ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCC
Confidence 55568999999999876421 124689999999999987543 2221 233445543 58999999997431
Q ss_pred ---CCCCCcceEEeeeeccccccCCeEEcc--CCCCCCCceeEEEE-CCEEEEEcCCCCCCCCCCCCCccccccccceec
Q 016413 241 ---RHTPGLEHWSIAVKDGKALEKAWRTEI--PIPRGGPHRACFVF-NDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVY 314 (390)
Q Consensus 241 ---~~~~~~~~~~~~~~~~~~~~~~W~~~~--~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 314 (390)
.... .+.++ +.||+.+++|+.+. +||.+|..++++++ +++|||+||.+..... .....+
T Consensus 423 ~~~~~~~--~~~~v--~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~-----------~~~~~~ 487 (656)
T 1k3i_A 423 QDSDATT--NAHII--TLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPF-----------EDSTPV 487 (656)
T ss_dssp SSSBCCC--CEEEE--ECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTT-----------CCCSBC
T ss_pred CCCCcCC--cceEE--EcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCc-----------CCCCcc
Confidence 1122 12222 23448999999986 89999988888888 9999999997532100 012356
Q ss_pred CcEEeeC-CCCCeEECCCCCCCCCcceeEEEEECCEEEEEcCCCCCCCcceeeEEeeeEEEeecC
Q 016413 315 GDVYMLD-DEMKWKVLPPMPKPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLD 378 (390)
Q Consensus 315 ~~v~~yd-~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~ 378 (390)
.++++|| .+++|+.+++++.+|..|++++...+++|||+||........ ..-++++|.|.
T Consensus 488 ~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~~~~~~~~----~~~~~e~~~Pp 548 (656)
T 1k3i_A 488 FTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTT----NHFDAQIFTPN 548 (656)
T ss_dssp CCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECCCCTTCSC----CCCEEEEEECG
T ss_pred cceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCCCCCCCCC----CeeEEEEEeCh
Confidence 7899999 788999999999999988654333499999999964322100 12357778764
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=1.9e-34 Score=292.94 Aligned_cols=298 Identities=9% Similarity=0.026 Sum_probs=214.9
Q ss_pred eeeeeccCCCceEeecCCCCCccccccceEEEe--cCC----CchhHH------HhhhcccccccCCCCeEECCCCCCcC
Q 016413 52 VASNWALEKSGVVVIPHVNATKIDRQRESVAVI--DKK----GQDAER------FLSATFADLPAPDLEWEQMPSAPVPR 119 (390)
Q Consensus 52 ~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~--~~~----~~~~~~------~~~~~~~~~~~~~~~W~~~~~~~~~R 119 (390)
.++.|||.+++|..+++++. ..++++++ ++. |..... .....++.||+.+++|+.++.+|.+|
T Consensus 167 ~~~~~dp~~~~W~~~~~~P~-----~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~ 241 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDLPI-----VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKH 241 (656)
T ss_dssp CCCCCCTTSCEEEEEEECSS-----CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSC
T ss_pred ccccCCCCCCeeeeeccCCC-----CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCC
Confidence 36788999999999888753 34555555 222 111000 01126899999999999999998888
Q ss_pred CCce--EE-EECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-CCEEEEEece-eCCCCCC
Q 016413 120 LDGA--AI-QIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQ-YGPQCRG 194 (390)
Q Consensus 120 ~~~~--~~-~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~~~iyv~GG~-~~~~~~~ 194 (390)
..++ ++ ..+++|||+||.+.. ++++||+.+++|+.+++|+. +|..|+++++ +++|||+||. ++..
T Consensus 242 ~~~~~~~~~~~~g~lyv~GG~~~~-----~v~~yd~~t~~W~~~~~~~~--~R~~~s~~~~~dg~iyv~GG~~~~~~--- 311 (656)
T 1k3i_A 242 DMFCPGISMDGNGQIVVTGGNDAK-----KTSLYDSSSDSWIPGPDMQV--ARGYQSSATMSDGRVFTIGGSWSGGV--- 311 (656)
T ss_dssp CCSSCEEEECTTSCEEEECSSSTT-----CEEEEEGGGTEEEECCCCSS--CCSSCEEEECTTSCEEEECCCCCSSS---
T ss_pred CCccccccCCCCCCEEEeCCCCCC-----ceEEecCcCCceeECCCCCc--cccccceEEecCCeEEEEeCcccCCc---
Confidence 7654 33 358999999998653 69999999999999999887 6888998988 9999999995 4332
Q ss_pred CCceEEEEECCCCCeEeC-----CCCCCCCCCceEEEECCEEEEEccCCCCC----CCCCcceEEeeeeccccccCCeEE
Q 016413 195 PTSRTFVLDSETRKWDSI-----PPLPSPRYSPATQLWRGRLHVMGGSKENR----HTPGLEHWSIAVKDGKALEKAWRT 265 (390)
Q Consensus 195 ~~~~v~~yd~~~~~W~~~-----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~~~~~~~~~~~~~~~~~~W~~ 265 (390)
..+++++||+.+++|+.+ .+|+..|.. +++..++++|++||.++.. ....++.|+ +.+++|..
T Consensus 312 ~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd-------~~~~~w~~ 383 (656)
T 1k3i_A 312 FEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYY-------TSGSGDVK 383 (656)
T ss_dssp CCCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEECCSSSEEEEEE-------CSTTCEEE
T ss_pred ccccceEeCCCCCcceeCCCcccccccccccc-ceeecCCceEEEECCCCcEEEecCccceeeee-------cCCcceee
Confidence 478999999999999997 456666553 5667899999999986532 233445555 68889876
Q ss_pred ccCCC-C------CCCceeEEE---ECCEEEEEcCCCCCCCCCCCCCccccccccceecC---cEEeeC-CCCCeEECC-
Q 016413 266 EIPIP-R------GGPHRACFV---FNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYG---DVYMLD-DEMKWKVLP- 330 (390)
Q Consensus 266 ~~~~p-~------~~~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~yd-~~~~W~~~~- 330 (390)
....+ . .+..++++. .+++||++||...... ...++ ++++|| .+++|+.+.
T Consensus 384 ~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~--------------~~~~~~~~~v~~yd~~~~~W~~~~~ 449 (656)
T 1k3i_A 384 SAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQD--------------SDATTNAHIITLGEPGTSPNTVFAS 449 (656)
T ss_dssp EEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSS--------------SBCCCCEEEEECCSTTSCCEEEECT
T ss_pred cCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCC--------------CCcCCcceEEEcCCCCCCCeeEEcc
Confidence 43222 1 222334443 5899999999753110 01223 689999 788999986
Q ss_pred -CCCCCCCcceeEEEEE-CCEEEEEcCCCCCCCcceeeEEeeeEEEeecCccceeeccCCC
Q 016413 331 -PMPKPNSHIECAWVIV-NNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLVIIYHYRPP 389 (390)
Q Consensus 331 -~~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~P 389 (390)
.||.+|..+. ++++ +++|||+||.+...... ....++++++||+++++|..++.+|
T Consensus 450 ~~mp~~R~~~~--~~~l~~g~i~v~GG~~~~~~~~-~~~~~~~v~~ydp~t~~W~~~~~~~ 507 (656)
T 1k3i_A 450 NGLYFARTFHT--SVVLPDGSTFITGGQRRGIPFE-DSTPVFTPEIYVPEQDTFYKQNPNS 507 (656)
T ss_dssp TCCSSCCBSCE--EEECTTSCEEEECCBSBCCTTC-CCSBCCCCEEEEGGGTEEEECCCCS
T ss_pred CCCCCCcccCC--eEECCCCCEEEECCcccCcCcC-CCCcccceEEEcCCCCceeecCCCC
Confidence 8999887653 3555 99999999976332100 0115678999999999999998776
No 19
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.84 E-value=0.012 Score=53.43 Aligned_cols=270 Identities=13% Similarity=0.101 Sum_probs=137.9
Q ss_pred cceeeeeccCCCceEeec-C-CCCCccccccceEEEecCCCchhHHHhhhcccccccCCCCe-EECCCCCCcCCCceEEE
Q 016413 50 LSVASNWALEKSGVVVIP-H-VNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEW-EQMPSAPVPRLDGAAIQ 126 (390)
Q Consensus 50 ~~~~~~~d~~~~~W~~l~-~-~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W-~~~~~~~~~R~~~~~~~ 126 (390)
-+++..+|+.+.+...-- . ....+.+....++++.++.-..... .+..+..+|+.+.+- ..++....| ..++.
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~-~~~~v~viD~~t~~~~~~i~~~~~p---~~i~~ 91 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVN-NSHVIFAIDINTFKEVGRITGFTSP---RYIHF 91 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEG-GGTEEEEEETTTCCEEEEEECCSSE---EEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEc-CCCEEEEEECcccEEEEEcCCCCCC---cEEEE
Confidence 357899999998875411 0 0011112223344443333222211 234788888887654 334333333 23333
Q ss_pred -ECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCC--CCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEE
Q 016413 127 -IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKD--MAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLD 203 (390)
Q Consensus 127 -~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~--~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd 203 (390)
-++++||....+ ..+.++|+.+.+-...-++... ....-..++..++++|+..- ...+.+.++|
T Consensus 92 ~~~g~lyv~~~~~------~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~-------~~~~~v~viD 158 (328)
T 3dsm_A 92 LSDEKAYVTQIWD------YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW-------SYQNRILKID 158 (328)
T ss_dssp EETTEEEEEEBSC------SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC-------TTCCEEEEEE
T ss_pred eCCCeEEEEECCC------CeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC-------CCCCEEEEEE
Confidence 688999987432 4699999998875422111110 00022234458999999851 0146799999
Q ss_pred CCCCCeEeCCCCCCCCCCceEE-EECCEEEEEccCCCCCC-----CCCcceEEeeeeccccccCCeEEccCCCCCCCcee
Q 016413 204 SETRKWDSIPPLPSPRYSPATQ-LWRGRLHVMGGSKENRH-----TPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRA 277 (390)
Q Consensus 204 ~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~-----~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~ 277 (390)
+.+.+....-+. +..-+.++ .-++++|+..-...... ...+.++| +.+.+....-.++.......
T Consensus 159 ~~t~~~~~~i~~--g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id-------~~t~~v~~~~~~~~g~~p~~ 229 (328)
T 3dsm_A 159 TETDKVVDELTI--GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRID-------AETFTVEKQFKFKLGDWPSE 229 (328)
T ss_dssp TTTTEEEEEEEC--SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEE-------TTTTEEEEEEECCTTCCCEE
T ss_pred CCCCeEEEEEEc--CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEE-------CCCCeEEEEEecCCCCCcee
Confidence 998775432221 11112233 33678888863221100 12344444 56666554333443322234
Q ss_pred EEEE--CCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCCCCCCcceeEEEE--ECCEEEE
Q 016413 278 CFVF--NDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHIECAWVI--VNNSIII 352 (390)
Q Consensus 278 ~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~~~~~~~~~~--~~~~l~v 352 (390)
++.. ++.||+..+ .++++| .+.+.....-.+.. .....++++ .++.|||
T Consensus 230 la~~~d~~~lyv~~~-------------------------~v~~~d~~t~~~~~~~~~~~~-~~~p~gi~vdp~~g~lyv 283 (328)
T 3dsm_A 230 VQLNGTRDTLYWINN-------------------------DIWRMPVEADRVPVRPFLEFR-DTKYYGLTVNPNNGEVYV 283 (328)
T ss_dssp EEECTTSCEEEEESS-------------------------SEEEEETTCSSCCSSCSBCCC-SSCEEEEEECTTTCCEEE
T ss_pred EEEecCCCEEEEEcc-------------------------EEEEEECCCCceeeeeeecCC-CCceEEEEEcCCCCeEEE
Confidence 4554 567888754 188999 55543221112211 112233334 3688999
Q ss_pred EcCCCCCCCcceeeEEeeeEEEeecCc
Q 016413 353 TGGTTEKHPMTKRMILVGEVFQFHLDS 379 (390)
Q Consensus 353 ~GG~~~~~~~~~~~~~~~~v~~yd~~~ 379 (390)
....+.. ....|.+||++.
T Consensus 284 a~~~~y~--------~~~~V~v~d~~g 302 (328)
T 3dsm_A 284 ADAIDYQ--------QQGIVYRYSPQG 302 (328)
T ss_dssp EECTTSS--------SEEEEEEECTTC
T ss_pred Ecccccc--------cCCEEEEECCCC
Confidence 8632211 123699999873
No 20
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.72 E-value=0.029 Score=51.74 Aligned_cols=268 Identities=12% Similarity=0.143 Sum_probs=136.4
Q ss_pred HHhhccEEEEecCCCCCCCccccceeeeeccCCCc--eEeecCCCCCc----cccccceEEEecCCCchhHHHhhhcccc
Q 016413 28 AALIADFMWASSSSSFSSSSAHLSVASNWALEKSG--VVVIPHVNATK----IDRQRESVAVIDKKGQDAERFLSATFAD 101 (390)
Q Consensus 28 ~~~~~~~l~~~GG~~~~~~~~~~~~~~~~d~~~~~--W~~l~~~~~~p----~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (390)
-++.++.||+.... + .+.+||+.+.+ |..-....... ........++.++.-... .....++.
T Consensus 49 p~v~~~~v~~~~~~--g-------~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~--~~~g~l~a 117 (376)
T 3q7m_A 49 PALADNVVYAADRA--G-------LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIG--SEKAQVYA 117 (376)
T ss_dssp CEEETTEEEEECTT--S-------EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEE--ETTSEEEE
T ss_pred cEEECCEEEEEcCC--C-------eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEE--cCCCEEEE
Confidence 35567888876532 3 68899987654 76533211100 001111112221111110 11236888
Q ss_pred cccCCC--CeEECCCCCCcCCCceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCc--eeecCCCCCCCCCcceEEEEe
Q 016413 102 LPAPDL--EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDMAHSHLGVVSD 177 (390)
Q Consensus 102 ~~~~~~--~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~l~~~~~r~~~~~~~~ 177 (390)
+|..+. .|+.-..-. ...+.++.++.||+... + ..+..||+.+.+ |+.-...+....+...+.+..
T Consensus 118 ~d~~tG~~~W~~~~~~~---~~~~p~~~~~~v~v~~~-~------g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~ 187 (376)
T 3q7m_A 118 LNTSDGTVAWQTKVAGE---ALSRPVVSDGLVLIHTS-N------GQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA 187 (376)
T ss_dssp EETTTCCEEEEEECSSC---CCSCCEEETTEEEEECT-T------SEEEEEETTTCCEEEEEECCC-----CCCCCCEEE
T ss_pred EECCCCCEEEEEeCCCc---eEcCCEEECCEEEEEcC-C------CeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE
Confidence 887655 576532211 12233556888887532 1 359999998765 876433222101223344556
Q ss_pred CCEEEEEeceeCCCCCCCCceEEEEECCCC--CeEeCCCCCCCC--------CCceEEEECCEEEEEccCCCCCCCCCcc
Q 016413 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETR--KWDSIPPLPSPR--------YSPATQLWRGRLHVMGGSKENRHTPGLE 247 (390)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r--------~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 247 (390)
++.||+-.. ...+..+|+.+. .|+.-...+... .....+..++.||+.+. ...+.
T Consensus 188 ~~~v~~g~~---------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~------~g~l~ 252 (376)
T 3q7m_A 188 FGAAVVGGD---------NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY------NGNLT 252 (376)
T ss_dssp TTEEEECCT---------TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT------TSCEE
T ss_pred CCEEEEEcC---------CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec------CcEEE
Confidence 887777321 346888998765 487643332211 22344567888888752 12344
Q ss_pred eEEeeeeccccccCCeEEccCCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCC--
Q 016413 248 HWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEM-- 324 (390)
Q Consensus 248 ~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~-- 324 (390)
.++. ......|+.... . ..+.++.++.||+.... + .++.+| .+.
T Consensus 253 ~~d~-----~tG~~~w~~~~~--~---~~~~~~~~~~l~~~~~~-g----------------------~l~~~d~~tG~~ 299 (376)
T 3q7m_A 253 ALDL-----RSGQIMWKRELG--S---VNDFIVDGNRIYLVDQN-D----------------------RVMALTIDGGVT 299 (376)
T ss_dssp EEET-----TTCCEEEEECCC--C---EEEEEEETTEEEEEETT-C----------------------CEEEEETTTCCE
T ss_pred EEEC-----CCCcEEeeccCC--C---CCCceEECCEEEEEcCC-C----------------------eEEEEECCCCcE
Confidence 4442 122335765321 1 23456778888887542 1 388998 443
Q ss_pred CeEECCCCCCCCCcceeEEEEECCEEEEEcCCCCCCCcceeeEEeeeEEEeecCccc
Q 016413 325 KWKVLPPMPKPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLV 381 (390)
Q Consensus 325 ~W~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 381 (390)
.|+.-. ++.... .+.+..++.||+.... . .+++||+++.+
T Consensus 300 ~w~~~~-~~~~~~---~~~~~~~~~l~v~~~~---g----------~l~~~d~~tG~ 339 (376)
T 3q7m_A 300 LWTQSD-LLHRLL---TSPVLYNGNLVVGDSE---G----------YLHWINVEDGR 339 (376)
T ss_dssp EEEECT-TTTSCC---CCCEEETTEEEEECTT---S----------EEEEEETTTCC
T ss_pred EEeecc-cCCCcc---cCCEEECCEEEEEeCC---C----------eEEEEECCCCc
Confidence 687631 222111 1235678888876421 1 37788877654
No 21
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.69 E-value=0.0028 Score=54.96 Aligned_cols=195 Identities=13% Similarity=0.071 Sum_probs=116.1
Q ss_pred CCCCCCcCCCc--eEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeC
Q 016413 112 MPSAPVPRLDG--AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYG 189 (390)
Q Consensus 112 ~~~~~~~R~~~--~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~ 189 (390)
+...|.....+ ++...++.||+-.|..+. +.+.++|+.+.+=...-+++. .-...+++..+++||+....
T Consensus 12 ~~~~phd~~~ftqGL~~~~~~LyestG~~g~----S~v~~vD~~tgkv~~~~~l~~--~~fgeGi~~~~~~ly~ltw~-- 83 (243)
T 3mbr_X 12 VKRYPHDTTAFTEGLFYLRGHLYESTGETGR----SSVRKVDLETGRILQRAEVPP--PYFGAGIVAWRDRLIQLTWR-- 83 (243)
T ss_dssp EEEEECCTTCCEEEEEEETTEEEEEECCTTS----CEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTEEEEEESS--
T ss_pred EEEcCCCCccccccEEEECCEEEEECCCCCC----ceEEEEECCCCCEEEEEeCCC--CcceeEEEEeCCEEEEEEee--
Confidence 33334444443 667778999999998753 469999999998765555554 34567788899999998632
Q ss_pred CCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEc---
Q 016413 190 PQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTE--- 266 (390)
Q Consensus 190 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~--- 266 (390)
.+.+++||+++.+ .+...+.+..+.+++..+++||+.-|. ..+..+| |++.+-..-
T Consensus 84 ------~~~v~v~D~~tl~--~~~ti~~~~~Gwglt~dg~~L~vSdgs------~~l~~iD-------p~t~~~~~~I~V 142 (243)
T 3mbr_X 84 ------NHEGFVYDLATLT--PRARFRYPGEGWALTSDDSHLYMSDGT------AVIRKLD-------PDTLQQVGSIKV 142 (243)
T ss_dssp ------SSEEEEEETTTTE--EEEEEECSSCCCEEEECSSCEEEECSS------SEEEEEC-------TTTCCEEEEEEC
T ss_pred ------CCEEEEEECCcCc--EEEEEeCCCCceEEeeCCCEEEEECCC------CeEEEEe-------CCCCeEEEEEEE
Confidence 5779999998754 333333344566777778889998652 2344444 555543321
Q ss_pred cCCCCCCC-ceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCC---CeEECCCCCC-------
Q 016413 267 IPIPRGGP-HRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEM---KWKVLPPMPK------- 334 (390)
Q Consensus 267 ~~~p~~~~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~---~W~~~~~~~~------- 334 (390)
...+.+.. --.....+++||+---. .++|.+-| .+. .|-.+..+..
T Consensus 143 ~~~g~~~~~lNeLe~~~G~lyanvw~----------------------s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~ 200 (243)
T 3mbr_X 143 TAGGRPLDNLNELEWVNGELLANVWL----------------------TSRIARIDPASGKVVAWIDLQALVPDADALTD 200 (243)
T ss_dssp EETTEECCCEEEEEEETTEEEEEETT----------------------TTEEEEECTTTCBEEEEEECGGGSTTTTSCCC
T ss_pred ccCCcccccceeeEEeCCEEEEEECC----------------------CCeEEEEECCCCCEEEEEECCcCccccccccC
Confidence 11122211 11344568998855432 23589999 443 5555543321
Q ss_pred CCCcceeEEEEE--CCEEEEEcCCC
Q 016413 335 PNSHIECAWVIV--NNSIIITGGTT 357 (390)
Q Consensus 335 ~~~~~~~~~~~~--~~~l~v~GG~~ 357 (390)
+.....-+++.. ++++||.|=.-
T Consensus 201 ~~~~vlNGIA~d~~~~~lfVTGK~w 225 (243)
T 3mbr_X 201 STNDVLNGIAFDAEHDRLFVTGKRW 225 (243)
T ss_dssp TTSSCEEEEEEETTTTEEEEEETTC
T ss_pred CcCCceEEEEEcCCCCEEEEECCCC
Confidence 222222233333 57888887653
No 22
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.61 E-value=0.0067 Score=55.23 Aligned_cols=225 Identities=7% Similarity=0.004 Sum_probs=118.1
Q ss_pred hcccccccCCCCeEECC-----CCCCcCCCceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCce-eecCCCCCCCCCc
Q 016413 97 ATFADLPAPDLEWEQMP-----SAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKW-VDRFDMPKDMAHS 170 (390)
Q Consensus 97 ~~~~~~~~~~~~W~~~~-----~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W-~~~~~l~~~~~r~ 170 (390)
..+..+|+.+.+....- ..+.......++..++++||....+ +.+.++|+.+.+- ..++....
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~------~~v~viD~~t~~~~~~i~~~~~----- 85 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNS------HVIFAIDINTFKEVGRITGFTS----- 85 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGG------TEEEEEETTTCCEEEEEECCSS-----
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCC------CEEEEEECcccEEEEEcCCCCC-----
Confidence 36777777776654311 1122223345666799999987532 4699999998775 33432222
Q ss_pred ceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCC----CCCceEEEECCEEEEEccCCCCCCCCC
Q 016413 171 HLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSP----RYSPATQLWRGRLHVMGGSKENRHTPG 245 (390)
Q Consensus 171 ~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~----r~~~~~~~~~~~iyv~GG~~~~~~~~~ 245 (390)
-..++. .++++|+.... ...+.++|+.+.+-...-+.... ..-..++..+++|||..-. ....
T Consensus 86 p~~i~~~~~g~lyv~~~~--------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~----~~~~ 153 (328)
T 3dsm_A 86 PRYIHFLSDEKAYVTQIW--------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS----YQNR 153 (328)
T ss_dssp EEEEEEEETTEEEEEEBS--------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT----TCCE
T ss_pred CcEEEEeCCCeEEEEECC--------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC----CCCE
Confidence 223444 67899998642 36789999998764321111110 0223455589999998521 1234
Q ss_pred cceEEeeeeccccccCCeEEccCC-CCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CC
Q 016413 246 LEHWSIAVKDGKALEKAWRTEIPI-PRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DE 323 (390)
Q Consensus 246 ~~~~~~~~~~~~~~~~~W~~~~~~-p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~ 323 (390)
+.++| +.+.+.....+. ..+. ..++.-++++|+......... . ...-...++++| .+
T Consensus 154 v~viD-------~~t~~~~~~i~~g~~p~--~i~~~~dG~l~v~~~~~~~~~---------~---~~~~~~~v~~id~~t 212 (328)
T 3dsm_A 154 ILKID-------TETDKVVDELTIGIQPT--SLVMDKYNKMWTITDGGYEGS---------P---YGYEAPSLYRIDAET 212 (328)
T ss_dssp EEEEE-------TTTTEEEEEEECSSCBC--CCEECTTSEEEEEBCCBCTTC---------S---SCBCCCEEEEEETTT
T ss_pred EEEEE-------CCCCeEEEEEEcCCCcc--ceEEcCCCCEEEEECCCccCC---------c---cccCCceEEEEECCC
Confidence 55555 455554332221 1111 122333688888754321100 0 000024599999 55
Q ss_pred CCeEECCCCCCCCCcceeEEEEE--CCEEEEEcCCCCCCCcceeeEEeeeEEEeecCccce
Q 016413 324 MKWKVLPPMPKPNSHIECAWVIV--NNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLVI 382 (390)
Q Consensus 324 ~~W~~~~~~~~~~~~~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W 382 (390)
.+....-.++.... ...++.. ++.||+..+ .++++|+++.+.
T Consensus 213 ~~v~~~~~~~~g~~--p~~la~~~d~~~lyv~~~---------------~v~~~d~~t~~~ 256 (328)
T 3dsm_A 213 FTVEKQFKFKLGDW--PSEVQLNGTRDTLYWINN---------------DIWRMPVEADRV 256 (328)
T ss_dssp TEEEEEEECCTTCC--CEEEEECTTSCEEEEESS---------------SEEEEETTCSSC
T ss_pred CeEEEEEecCCCCC--ceeEEEecCCCEEEEEcc---------------EEEEEECCCCce
Confidence 54432212322111 1223333 567887644 277888877654
No 23
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.37 E-value=0.0012 Score=61.15 Aligned_cols=179 Identities=12% Similarity=0.065 Sum_probs=88.9
Q ss_pred cEEEEecCCCCCCCccccceeeeeccCCCceEeecCCCCCccccccceEEEecCCCch-hHHHhhhcccccccCCCCeEE
Q 016413 33 DFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQD-AERFLSATFADLPAPDLEWEQ 111 (390)
Q Consensus 33 ~~l~~~GG~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~W~~ 111 (390)
.++|+.|+. ++ .+..||+.+.+-...-..... ..+++...+.... .....+..+..+|..+.+-..
T Consensus 2 ~~l~vs~~~-d~-------~v~v~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~ 68 (391)
T 1l0q_A 2 TFAYIANSE-SD-------NISVIDVTSNKVTATIPVGSN-----PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIA 68 (391)
T ss_dssp EEEEEEETT-TT-------EEEEEETTTTEEEEEEECSSS-----EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred CEEEEEcCC-CC-------EEEEEECCCCeEEEEeecCCC-----cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEE
Confidence 567888877 55 788899877654332221111 1223332222111 111123467777776654432
Q ss_pred CCCCCCcCCCceEEEE--CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe--CCEEEEEece
Q 016413 112 MPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQ 187 (390)
Q Consensus 112 ~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~--~~~iyv~GG~ 187 (390)
.-..+. .-.+++.. +.+||+.+..+ ..+.+||+.+++-...-... ....+++.. +..||+.++.
T Consensus 69 ~~~~~~--~v~~~~~spdg~~l~~~~~~~------~~v~v~d~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~ 136 (391)
T 1l0q_A 69 TVPAGS--SPQGVAVSPDGKQVYVTNMAS------STLSVIDTTSNTVAGTVKTG----KSPLGLALSPDGKKLYVTNNG 136 (391)
T ss_dssp EEECSS--SEEEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECS----SSEEEEEECTTSSEEEEEETT
T ss_pred EEECCC--CccceEECCCCCEEEEEECCC------CEEEEEECCCCeEEEEEeCC----CCcceEEECCCCCEEEEEeCC
Confidence 211111 11222222 34566665433 35999999988754432222 122334433 4467777642
Q ss_pred eCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEe
Q 016413 188 YGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 188 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
...+.+||+.+.+....-.. ...-..++.. ++.||+.++.+ ..+..|++
T Consensus 137 --------~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~-----~~v~~~d~ 187 (391)
T 1l0q_A 137 --------DKTVSVINTVTKAVINTVSV--GRSPKGIAVTPDGTKVYVANFDS-----MSISVIDT 187 (391)
T ss_dssp --------TTEEEEEETTTTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTT-----TEEEEEET
T ss_pred --------CCEEEEEECCCCcEEEEEec--CCCcceEEECCCCCEEEEEeCCC-----CEEEEEEC
Confidence 35689999987765433221 1111223322 34677776543 34666663
No 24
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.35 E-value=0.011 Score=51.22 Aligned_cols=111 Identities=18% Similarity=0.194 Sum_probs=74.4
Q ss_pred cCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCC
Q 016413 160 RFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKE 239 (390)
Q Consensus 160 ~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 239 (390)
+...|.+..-+..++...++.||+-.|..+ .+.+.++|+++.+=..--+++..-.+.+++..+++||+....+
T Consensus 12 ~~~~phd~~~ftqGL~~~~~~LyestG~~g------~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~- 84 (243)
T 3mbr_X 12 VKRYPHDTTAFTEGLFYLRGHLYESTGETG------RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN- 84 (243)
T ss_dssp EEEEECCTTCCEEEEEEETTEEEEEECCTT------SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-
T ss_pred EEEcCCCCccccccEEEECCEEEEECCCCC------CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC-
Confidence 334444434556678888999999988654 4678999999987655556666556677788999999996442
Q ss_pred CCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeEEEECCEEEEEcC
Q 016413 240 NRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGG 290 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG 290 (390)
..+.+|| + .+.+.+..++.+..+.+++.-+++||+.-|
T Consensus 85 ----~~v~v~D-------~--~tl~~~~ti~~~~~Gwglt~dg~~L~vSdg 122 (243)
T 3mbr_X 85 ----HEGFVYD-------L--ATLTPRARFRYPGEGWALTSDDSHLYMSDG 122 (243)
T ss_dssp ----SEEEEEE-------T--TTTEEEEEEECSSCCCEEEECSSCEEEECS
T ss_pred ----CEEEEEE-------C--CcCcEEEEEeCCCCceEEeeCCCEEEEECC
Confidence 3455555 2 333344444433445567777788998876
No 25
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.31 E-value=0.007 Score=55.32 Aligned_cols=141 Identities=11% Similarity=0.113 Sum_probs=71.6
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-C--CEEEEEeceeCCCCCCCCceEEEEECC
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-G--RYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (390)
+.+++.|+.++ .+.+||..+++|..+..+... ...-.+++.. + +.+++.|+. -..+.+||..
T Consensus 69 ~~~l~s~~~dg------~v~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~--------d~~i~v~d~~ 133 (379)
T 3jrp_A 69 GTILASCSYDG------KVLIWKEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPLLLVASS--------DGKVSVVEFK 133 (379)
T ss_dssp CSEEEEEETTS------CEEEEEEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEET--------TSEEEEEECC
T ss_pred CCEEEEeccCC------EEEEEEcCCCceeEeeeecCC-CcceEEEEeCCCCCCCEEEEecC--------CCcEEEEecC
Confidence 57777887763 488899999888766554431 1222233332 2 556777654 3457788877
Q ss_pred CCCeEeCCCCCCCCCC-ceEEEE--------------CCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCC
Q 016413 206 TRKWDSIPPLPSPRYS-PATQLW--------------RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIP 270 (390)
Q Consensus 206 ~~~W~~~~~~p~~r~~-~~~~~~--------------~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p 270 (390)
+..-.....+...... .+++.. ++.+++.|+.+ ..+..|++. .....|.....+.
T Consensus 134 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~-----~~~~~~~~~~~~~ 203 (379)
T 3jrp_A 134 ENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-----NLVKIWKYN-----SDAQTYVLESTLE 203 (379)
T ss_dssp TTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETT-----SCEEEEEEE-----TTTTEEEEEEEEC
T ss_pred CCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCC-----CeEEEEEec-----CCCcceeeEEEEe
Confidence 6532111011111111 122222 46777777754 357777752 1223344443332
Q ss_pred CCCCceeEEEE--C---CEEEEEcCCCCC
Q 016413 271 RGGPHRACFVF--N---DRLFVVGGQEGD 294 (390)
Q Consensus 271 ~~~~~~~~~~~--~---~~iyv~GG~~~~ 294 (390)
.......++.+ + +++++.|+.++.
T Consensus 204 ~h~~~v~~~~~sp~~~~~~~l~s~~~dg~ 232 (379)
T 3jrp_A 204 GHSDWVRDVAWSPTVLLRSYLASVSQDRT 232 (379)
T ss_dssp CCSSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred cccCcEeEEEECCCCCCCCeEEEEeCCCE
Confidence 21111222222 3 678888887653
No 26
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.28 E-value=0.0072 Score=52.90 Aligned_cols=198 Identities=12% Similarity=0.043 Sum_probs=113.2
Q ss_pred eEECCCCCCcCCC--ceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEec
Q 016413 109 WEQMPSAPVPRLD--GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSG 186 (390)
Q Consensus 109 W~~~~~~~~~R~~--~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG 186 (390)
++.+...|..+.. .++...++.||+..|..+. +.+.++|+++.+=...-+++. .-+..+++..+++||+...
T Consensus 31 ~~vv~~~phd~~~ftqGL~~~~~~LyestG~~g~----S~v~~vD~~Tgkv~~~~~l~~--~~FgeGit~~g~~ly~ltw 104 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFYRNGYFYESTGLNGR----SSIRKVDIESGKTLQQIELGK--RYFGEGISDWKDKIVGLTW 104 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEEETTEEEEEEEETTE----EEEEEECTTTCCEEEEEECCT--TCCEEEEEEETTEEEEEES
T ss_pred eEEEEEecCCCCcccceEEEECCEEEEECCCCCC----ceEEEEECCCCcEEEEEecCC--ccceeEEEEeCCEEEEEEe
Confidence 3444444433333 4445558999999997653 468999999987655444543 3355668889999999954
Q ss_pred eeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEc
Q 016413 187 QYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTE 266 (390)
Q Consensus 187 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 266 (390)
. .+.+++||+++.+=. ...+.+..+.+++.-+++||+.-|. +.+..+| |++.+-..-
T Consensus 105 ~--------~~~v~v~D~~t~~~~--~ti~~~~eG~glt~dg~~L~~SdGs------~~i~~iD-------p~T~~v~~~ 161 (262)
T 3nol_A 105 K--------NGLGFVWNIRNLRQV--RSFNYDGEGWGLTHNDQYLIMSDGT------PVLRFLD-------PESLTPVRT 161 (262)
T ss_dssp S--------SSEEEEEETTTCCEE--EEEECSSCCCCEEECSSCEEECCSS------SEEEEEC-------TTTCSEEEE
T ss_pred e--------CCEEEEEECccCcEE--EEEECCCCceEEecCCCEEEEECCC------CeEEEEc-------CCCCeEEEE
Confidence 2 577999999886542 2333333556666667788888652 2344443 555543322
Q ss_pred cCC---CCCCCce-eEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCC---CeEECCCCCC----
Q 016413 267 IPI---PRGGPHR-ACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEM---KWKVLPPMPK---- 334 (390)
Q Consensus 267 ~~~---p~~~~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~---~W~~~~~~~~---- 334 (390)
-+. .++.... .+...+++||+---. .++|.+-| .+. .|-.++.+..
T Consensus 162 I~V~~~g~~~~~lNELe~~~G~lyan~w~----------------------~~~I~vIDp~tG~V~~~Id~~~L~~~~~~ 219 (262)
T 3nol_A 162 ITVTAHGEELPELNELEWVDGEIFANVWQ----------------------TNKIVRIDPETGKVTGIIDLNGILAEAGP 219 (262)
T ss_dssp EECEETTEECCCEEEEEEETTEEEEEETT----------------------SSEEEEECTTTCBEEEEEECTTGGGGSCS
T ss_pred EEeccCCccccccceeEEECCEEEEEEcc----------------------CCeEEEEECCCCcEEEEEECCcCcccccc
Confidence 111 1121110 234558998864322 23599999 444 4555543321
Q ss_pred --CCCcceeEEEEE--CCEEEEEcCCC
Q 016413 335 --PNSHIECAWVIV--NNSIIITGGTT 357 (390)
Q Consensus 335 --~~~~~~~~~~~~--~~~l~v~GG~~ 357 (390)
+.....-+++.. ++.+||.|-.-
T Consensus 220 ~~~~~~vlNGIA~dp~~~~lfVTGK~W 246 (262)
T 3nol_A 220 LPSPIDVLNGIAWDKEHHRLFVTGKLW 246 (262)
T ss_dssp CCSSCCCEEEEEEETTTTEEEEEETTC
T ss_pred ccCcCCceEEEEEcCCCCEEEEECCCC
Confidence 112222233333 56888887653
No 27
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.27 E-value=0.0072 Score=54.45 Aligned_cols=98 Identities=9% Similarity=-0.010 Sum_probs=45.5
Q ss_pred cccccccC--CCCeEECCCCCCcCCCceEEEE-CC-EEEEEecCCCCCCCCCeEEEEeCCCC-ceeecCCCCCCCCCcce
Q 016413 98 TFADLPAP--DLEWEQMPSAPVPRLDGAAIQI-KN-LFYVFAGYGSLDYVHSHVDVYNFTDN-KWVDRFDMPKDMAHSHL 172 (390)
Q Consensus 98 ~~~~~~~~--~~~W~~~~~~~~~R~~~~~~~~-~~-~lyv~GG~~~~~~~~~~v~~yd~~~~-~W~~~~~l~~~~~r~~~ 172 (390)
.+..|+.. +.+++.+..++....-..++.. ++ .||+.+..+ ..+.+||+... ....+..++.. ..-.
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~--~~~~ 132 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA------GNVSVTRLEDGLPVGVVDVVEGL--DGCH 132 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT------TEEEEEEEETTEEEEEEEEECCC--TTBC
T ss_pred eEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC------CeEEEEECCCCccccccccccCC--CCce
Confidence 45555444 5566655443322222223322 33 466655422 34777877322 22222222221 1122
Q ss_pred EEEE--eCCEEEEEeceeCCCCCCCCceEEEEECCC-CCeEe
Q 016413 173 GVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSET-RKWDS 211 (390)
Q Consensus 173 ~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~-~~W~~ 211 (390)
.++. .+..||+.+.. ...+.+||..+ .+...
T Consensus 133 ~~~~s~dg~~l~~~~~~--------~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 133 SANISPDNRTLWVPALK--------QDRICLFTVSDDGHLVA 166 (343)
T ss_dssp CCEECTTSSEEEEEEGG--------GTEEEEEEECTTSCEEE
T ss_pred EEEECCCCCEEEEecCC--------CCEEEEEEecCCCceee
Confidence 2233 24467776522 34588899877 55643
No 28
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.22 E-value=0.13 Score=47.35 Aligned_cols=212 Identities=17% Similarity=0.229 Sum_probs=115.0
Q ss_pred cccccccCCC--CeEECCCCC-------CcCCCceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCc--eeecCCCCCC
Q 016413 98 TFADLPAPDL--EWEQMPSAP-------VPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKD 166 (390)
Q Consensus 98 ~~~~~~~~~~--~W~~~~~~~-------~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~l~~~ 166 (390)
.++.+|..+. .|+.-.... ........+..++.||+.... ..+.++|+.+.+ |+.-. +..
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-------g~l~a~d~~tG~~~W~~~~--~~~ 134 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK-------AQVYALNTSDGTVAWQTKV--AGE 134 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-------SEEEEEETTTCCEEEEEEC--SSC
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-------CEEEEEECCCCCEEEEEeC--CCc
Confidence 6778887654 576543211 112234445668899885431 359999998764 76532 221
Q ss_pred CCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCCC--eEeCCCCCC--CCCCceEEEECCEEEEEccCCCCCC
Q 016413 167 MAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSIPPLPS--PRYSPATQLWRGRLHVMGGSKENRH 242 (390)
Q Consensus 167 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~ 242 (390)
...+.++.++.||+... ...+..||+++.+ |+.-.+.+. .+...+.++.++.||+.. ..
T Consensus 135 ---~~~~p~~~~~~v~v~~~---------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~-~~---- 197 (376)
T 3q7m_A 135 ---ALSRPVVSDGLVLIHTS---------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGG-DN---- 197 (376)
T ss_dssp ---CCSCCEEETTEEEEECT---------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECC-TT----
T ss_pred ---eEcCCEEECCEEEEEcC---------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEc-CC----
Confidence 12223456888887542 3468999987765 876543221 122334456688877732 11
Q ss_pred CCCcceEEeeeeccccccCCeEEccCCCCCC--------CceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceec
Q 016413 243 TPGLEHWSIAVKDGKALEKAWRTEIPIPRGG--------PHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVY 314 (390)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~--------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 314 (390)
..+..++. ......|+.....|... .....+..++.+|+.+. ++
T Consensus 198 -g~l~~~d~-----~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-~g--------------------- 249 (376)
T 3q7m_A 198 -GRVSAVLM-----EQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-NG--------------------- 249 (376)
T ss_dssp -TEEEEEET-----TTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT-TS---------------------
T ss_pred -CEEEEEEC-----CCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec-Cc---------------------
Confidence 12333432 12344576643333211 12344567888888652 22
Q ss_pred CcEEeeC-CCC--CeEECCCCCCCCCcceeEEEEECCEEEEEcCCCCCCCcceeeEEeeeEEEeecCcc--ceee
Q 016413 315 GDVYMLD-DEM--KWKVLPPMPKPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSL--VIIY 384 (390)
Q Consensus 315 ~~v~~yd-~~~--~W~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~ 384 (390)
.++.+| .+. .|+.-. +. ....+..++.||+.... . .+++||+.+. .|+.
T Consensus 250 -~l~~~d~~tG~~~w~~~~--~~-----~~~~~~~~~~l~~~~~~---g----------~l~~~d~~tG~~~w~~ 303 (376)
T 3q7m_A 250 -NLTALDLRSGQIMWKREL--GS-----VNDFIVDGNRIYLVDQN---D----------RVMALTIDGGVTLWTQ 303 (376)
T ss_dssp -CEEEEETTTCCEEEEECC--CC-----EEEEEEETTEEEEEETT---C----------CEEEEETTTCCEEEEE
T ss_pred -EEEEEECCCCcEEeeccC--CC-----CCCceEECCEEEEEcCC---C----------eEEEEECCCCcEEEee
Confidence 288898 443 787632 11 12346678888887531 1 3788887664 4653
No 29
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.19 E-value=0.1 Score=45.74 Aligned_cols=172 Identities=9% Similarity=0.034 Sum_probs=81.3
Q ss_pred ccEEEEecCCCCCCCccccceeeeeccCCCceEeecCCCCCccccccceEEEecCCCchhHHHhhhcccccccCCCCeEE
Q 016413 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQ 111 (390)
Q Consensus 32 ~~~l~~~GG~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 111 (390)
++.||+.... .+ .+..||+. .....++..... ....++++-.+...-.....+..+..+|+. .+...
T Consensus 30 ~g~l~v~~~~-~~-------~v~~~~~~-~~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~ 96 (300)
T 2qc5_A 30 DGKVWFTQHK-AN-------KISSLDQS-GRIKEFEVPTPD---AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTE 96 (300)
T ss_dssp TSCEEEEETT-TT-------EEEEECTT-SCEEEEECSSTT---CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCCEEEEcCC-CC-------eEEEECCC-CceEEEECCCCC---CcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEE
Confidence 4667776533 22 67788887 665554321110 112233332211111111112357788877 55544
Q ss_pred CCCCCCcCCCceEEEE-CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeC
Q 016413 112 MPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYG 189 (390)
Q Consensus 112 ~~~~~~~R~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~ 189 (390)
.........-.+++.. +++||+..... ..+.+||+. .+..... ++... ..-.+++. -+++||+...
T Consensus 97 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~-g~~~~~~-~~~~~-~~~~~i~~d~~g~l~v~~~--- 164 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGLNGDIWFTQLNG------DRIGKLTAD-GTIYEYD-LPNKG-SYPAFITLGSDNALWFTEN--- 164 (300)
T ss_dssp EECSSTTCCEEEEEECSTTCEEEEETTT------TEEEEECTT-SCEEEEE-CSSTT-CCEEEEEECTTSSEEEEET---
T ss_pred ecCCCCCCCCccceECCCCCEEEEccCC------CeEEEECCC-CCEEEcc-CCCCC-CCceeEEECCCCCEEEEec---
Confidence 3211111112233332 57888875322 358899987 5554332 22111 22233443 3567888652
Q ss_pred CCCCCCCceEEEEECCCCCeEeCCCCCCCCCCc-eEEEE-CCEEEEEc
Q 016413 190 PQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSP-ATQLW-RGRLHVMG 235 (390)
Q Consensus 190 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~G 235 (390)
....+.+||+ +.+...+. ++...... .++.. ++.||+..
T Consensus 165 -----~~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~ 205 (300)
T 2qc5_A 165 -----QNNSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALWFVE 205 (300)
T ss_dssp -----TTTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEE
T ss_pred -----CCCeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCCEEEEc
Confidence 1356889998 56665542 22211122 23332 56788874
No 30
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.15 E-value=0.031 Score=50.88 Aligned_cols=150 Identities=6% Similarity=-0.012 Sum_probs=69.6
Q ss_pred ccEEEEecCCCCCCCccccceeeeeccCCCceEeecCCCCCccccccceEEEecCCCchhHHHhhhcccccccCCCCeEE
Q 016413 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQ 111 (390)
Q Consensus 32 ~~~l~~~GG~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 111 (390)
++.+++.|+. ++ .+..||+.+.++..+..+.... ..-.+++...+...-.....+..+..+|..+.++..
T Consensus 19 ~~~~l~~~~~-d~-------~v~i~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 19 DRTQIAICPN-NH-------EVHIYEKSGNKWVQVHELKEHN--GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp TSSEEEEECS-SS-------EEEEEEEETTEEEEEEEEECCS--SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEE
T ss_pred CCCEEEEEeC-CC-------EEEEEeCCCCcEEeeeeecCCC--CcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeee
Confidence 5667777777 55 7888998888765554443220 111222222221111101112356667766666544
Q ss_pred CCCCCCcCCCceEEEE--CCEEEEEecCCCCCCCCCeEEEEeCCCCc-eeecCCCCCCCCCcceEEEEe-CCEEEEEece
Q 016413 112 MPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNK-WVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQ 187 (390)
Q Consensus 112 ~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~~-W~~~~~l~~~~~r~~~~~~~~-~~~iyv~GG~ 187 (390)
...+......-..+.+ +++.++.|+.++ .+..||..+.. |.....+..+....-.+++.. ++.+++.|+.
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGSR------VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETTS------SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCC------EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 3222211112222222 466777777653 25556555443 332222211111122233332 5667777764
Q ss_pred eCCCCCCCCceEEEEECC
Q 016413 188 YGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 188 ~~~~~~~~~~~v~~yd~~ 205 (390)
+ ..+..||..
T Consensus 163 d--------g~i~~~d~~ 172 (372)
T 1k8k_C 163 D--------FKCRIFSAY 172 (372)
T ss_dssp T--------SCEEEEECC
T ss_pred C--------CCEEEEEcc
Confidence 3 346778854
No 31
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.12 E-value=0.042 Score=51.84 Aligned_cols=188 Identities=13% Similarity=0.146 Sum_probs=96.0
Q ss_pred EEECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEEC
Q 016413 125 IQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (390)
Q Consensus 125 ~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (390)
+..++..++.|+.++ .+.+||+.+.+-... +.. .......+..++..++.|+.+ ..+..||+
T Consensus 205 ~~~~~~~l~s~s~dg------~i~~wd~~~~~~~~~--~~~--~~~~v~~~~~~~~~l~~~~~d--------g~i~iwd~ 266 (445)
T 2ovr_B 205 MHLHEKRVVSGSRDA------TLRVWDIETGQCLHV--LMG--HVAAVRCVQYDGRRVVSGAYD--------FMVKVWDP 266 (445)
T ss_dssp EEEETTEEEEEETTS------EEEEEESSSCCEEEE--EEC--CSSCEEEEEECSSCEEEEETT--------SCEEEEEG
T ss_pred EEecCCEEEEEeCCC------EEEEEECCCCcEEEE--EcC--CcccEEEEEECCCEEEEEcCC--------CEEEEEEC
Confidence 334555677777653 588899887653321 111 111222233467777777643 34777887
Q ss_pred CCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeEEEECCE
Q 016413 205 ETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDR 284 (390)
Q Consensus 205 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~ 284 (390)
.+.+- +..+.........+..++..++.|+.+ ..+..|++ .+.+ .+..+........+...++.
T Consensus 267 ~~~~~--~~~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~i~d~-------~~~~--~~~~~~~~~~~v~~~~~~~~ 330 (445)
T 2ovr_B 267 ETETC--LHTLQGHTNRVYSLQFDGIHVVSGSLD-----TSIRVWDV-------ETGN--CIHTLTGHQSLTSGMELKDN 330 (445)
T ss_dssp GGTEE--EEEECCCSSCEEEEEECSSEEEEEETT-----SCEEEEET-------TTCC--EEEEECCCCSCEEEEEEETT
T ss_pred CCCcE--eEEecCCCCceEEEEECCCEEEEEeCC-----CeEEEEEC-------CCCC--EEEEEcCCcccEEEEEEeCC
Confidence 66532 222222222223344477777777654 35677774 2332 12111111112234455667
Q ss_pred EEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCC-eEECCCCCCCCCcceeEEEEECCEEEEEcCCCCCCCc
Q 016413 285 LFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMK-WKVLPPMPKPNSHIECAWVIVNNSIIITGGTTEKHPM 362 (390)
Q Consensus 285 iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~-W~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~ 362 (390)
.++.|+.++. |.+|| .+.+ -..+........ ....+..++++++.|+.++.
T Consensus 331 ~l~~~~~dg~----------------------i~vwd~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~l~s~~~dg~--- 383 (445)
T 2ovr_B 331 ILVSGNADST----------------------VKIWDIKTGQCLQTLQGPNKHQS--AVTCLQFNKNFVITSSDDGT--- 383 (445)
T ss_dssp EEEEEETTSC----------------------EEEEETTTCCEEEEECSTTSCSS--CEEEEEECSSEEEEEETTSE---
T ss_pred EEEEEeCCCe----------------------EEEEECCCCcEEEEEccCCCCCC--CEEEEEECCCEEEEEeCCCe---
Confidence 7778876653 88888 4442 222221111111 23335567778888876533
Q ss_pred ceeeEEeeeEEEeecCccce
Q 016413 363 TKRMILVGEVFQFHLDSLVI 382 (390)
Q Consensus 363 ~~~~~~~~~v~~yd~~~~~W 382 (390)
|.+||+.+.+.
T Consensus 384 ---------v~iwd~~~~~~ 394 (445)
T 2ovr_B 384 ---------VKLWDLKTGEF 394 (445)
T ss_dssp ---------EEEEETTTCCE
T ss_pred ---------EEEEECCCCce
Confidence 66777666543
No 32
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.98 E-value=0.16 Score=44.33 Aligned_cols=266 Identities=8% Similarity=0.024 Sum_probs=121.5
Q ss_pred ccEEEEecCCCCCCCccccceeeeeccCCCceEeecCCCCCccccccceEEEecCCCchhHHHhhhcccccccCCCCeEE
Q 016413 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQ 111 (390)
Q Consensus 32 ~~~l~~~GG~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 111 (390)
++.||+.... .+ .+..||+. .....+...... ....++++-.+...-........++.+++. .+.+.
T Consensus 25 ~g~l~v~~~~-~~-------~v~~~d~~-~~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~ 91 (299)
T 2z2n_A 25 KGKVWITQHK-AN-------MISCINLD-GKITEYPLPTPD---AKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKE 91 (299)
T ss_dssp TSCEEEEETT-TT-------EEEEECTT-CCEEEEECSSTT---CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCCEEEEecC-CC-------cEEEEcCC-CCeEEecCCccc---CceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEE
Confidence 4567765432 22 57888887 666554421111 112223322211111111112357777765 34443
Q ss_pred CCCCCCc-CCCceEEEE-CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-CCEEEEEecee
Q 016413 112 MPSAPVP-RLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQY 188 (390)
Q Consensus 112 ~~~~~~~-R~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~~~iyv~GG~~ 188 (390)
.. ++.. ..-.+++.. +++||+..... ..+.++|+ +.+..... ++.. ...-.+++.. ++.+|+...
T Consensus 92 ~~-~~~~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~d~-~g~~~~~~-~~~~-~~~~~~i~~~~~g~l~v~~~-- 159 (299)
T 2z2n_A 92 YT-LPNPDSAPYGITEGPNGDIWFTEMNG------NRIGRITD-DGKIREYE-LPNK-GSYPSFITLGSDNALWFTEN-- 159 (299)
T ss_dssp EE-CSSTTCCEEEEEECTTSCEEEEETTT------TEEEEECT-TCCEEEEE-CSST-TCCEEEEEECTTSCEEEEET--
T ss_pred Ee-CCCcCCCceeeEECCCCCEEEEecCC------ceEEEECC-CCCEEEec-CCCC-CCCCceEEEcCCCCEEEEeC--
Confidence 32 2211 112233333 46888875432 35889998 55554432 1211 1223344443 678888642
Q ss_pred CCCCCCCCceEEEEECCCCCeEeCCCCCCCCCC-ceEEEE-CCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEc
Q 016413 189 GPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYS-PATQLW-RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTE 266 (390)
Q Consensus 189 ~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 266 (390)
....+.+||+ +.+..... .+..... ..++.. ++.||+..... ..+.+|+ + +.+....
T Consensus 160 ------~~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~-------~-~g~~~~~ 218 (299)
T 2z2n_A 160 ------QNNAIGRITE-SGDITEFK-IPTPASGPVGITKGNDDALWFVEIIG-----NKIGRIT-------T-SGEITEF 218 (299)
T ss_dssp ------TTTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETTT-----TEEEEEC-------T-TCCEEEE
T ss_pred ------CCCEEEEEcC-CCcEEEee-CCCCCCcceeEEECCCCCEEEEccCC-----ceEEEEC-------C-CCcEEEE
Confidence 1356899999 66666542 1111111 223332 46788875321 2233343 3 4555443
Q ss_pred cCCCCCCCceeEEEE--CCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeCCCCCeEECCCCCCCCCcceeEEE
Q 016413 267 IPIPRGGPHRACFVF--NDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLDDEMKWKVLPPMPKPNSHIECAWV 344 (390)
Q Consensus 267 ~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~W~~~~~~~~~~~~~~~~~~ 344 (390)
. ++........+.. ++.||+....++ .+.+||+..+...+. ++...... .+++
T Consensus 219 ~-~~~~~~~~~~i~~~~~g~l~v~~~~~~----------------------~i~~~d~~g~~~~~~-~~~~~~~~-~~i~ 273 (299)
T 2z2n_A 219 K-IPTPNARPHAITAGAGIDLWFTEWGAN----------------------KIGRLTSNNIIEEYP-IQIKSAEP-HGIC 273 (299)
T ss_dssp E-CSSTTCCEEEEEECSTTCEEEEETTTT----------------------EEEEEETTTEEEEEE-CSSSSCCE-EEEE
T ss_pred E-CCCCCCCceeEEECCCCCEEEeccCCc----------------------eEEEECCCCceEEEe-CCCCCCcc-ceEE
Confidence 2 2211111223333 567888753221 388888533333331 12111111 2223
Q ss_pred EECCEEEEEcCCCCCCCcceeeEEeeeEEEeecCccc
Q 016413 345 IVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLV 381 (390)
Q Consensus 345 ~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 381 (390)
..++.||+... . + .+.+||+.+++
T Consensus 274 ~~~g~l~v~~~-~--~----------~l~~~~~~~~~ 297 (299)
T 2z2n_A 274 FDGETIWFAME-C--D----------KIGKLTLIKDN 297 (299)
T ss_dssp ECSSCEEEEET-T--T----------EEEEEEEC---
T ss_pred ecCCCEEEEec-C--C----------cEEEEEcCccc
Confidence 36778888753 1 1 37888887754
No 33
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.92 E-value=0.033 Score=52.52 Aligned_cols=163 Identities=15% Similarity=0.129 Sum_probs=79.2
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCceeec-CCCCCCCCCcceEEEE
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDR-FDMPKDMAHSHLGVVS 176 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~-~~l~~~~~r~~~~~~~ 176 (390)
.+..+|..+.+-... +......-..+...+..++.|+.++ .+.+||..+..-... ..+.. .......+.
T Consensus 194 ~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~s~s~dg------~i~vwd~~~~~~~~~~~~~~~--~~~~v~~~~ 263 (435)
T 1p22_A 194 TVRVWDVNTGEMLNT--LIHHCEAVLHLRFNNGMMVTCSKDR------SIAVWDMASPTDITLRRVLVG--HRAAVNVVD 263 (435)
T ss_dssp CEEEEESSSCCEEEE--ECCCCSCEEEEECCTTEEEEEETTS------CEEEEECSSSSCCEEEEEECC--CSSCEEEEE
T ss_pred eEEEEECCCCcEEEE--EcCCCCcEEEEEEcCCEEEEeeCCC------cEEEEeCCCCCCceeeeEecC--CCCcEEEEE
Confidence 566666655543211 1111112222334556777777663 488888876542211 11111 111222222
Q ss_pred eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeecc
Q 016413 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDG 256 (390)
Q Consensus 177 ~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~ 256 (390)
.++..++.|+. -..+.+||..+.+-.. .+.........+..++.+++.|+.+ ..+..|++
T Consensus 264 ~~~~~l~s~~~--------dg~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~g~~d-----g~i~iwd~----- 323 (435)
T 1p22_A 264 FDDKYIVSASG--------DRTIKVWNTSTCEFVR--TLNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDI----- 323 (435)
T ss_dssp EETTEEEEEET--------TSEEEEEETTTCCEEE--EEECCSSCEEEEEEETTEEEEEETT-----SCEEEEET-----
T ss_pred eCCCEEEEEeC--------CCeEEEEECCcCcEEE--EEcCCCCcEEEEEeCCCEEEEEeCC-----CeEEEEEC-----
Confidence 35556666653 2457889987754322 1221222223344466677777654 35777774
Q ss_pred ccccCCeEEccCCCCCCCceeEEEECCEEEEEcCCCCC
Q 016413 257 KALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGD 294 (390)
Q Consensus 257 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~ 294 (390)
.+.+ .+..+........++..+++.++.|+.++.
T Consensus 324 --~~~~--~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~ 357 (435)
T 1p22_A 324 --ECGA--CLRVLEGHEELVRCIRFDNKRIVSGAYDGK 357 (435)
T ss_dssp --TTCC--EEEEECCCSSCEEEEECCSSEEEEEETTSC
T ss_pred --CCCC--EEEEEeCCcCcEEEEEecCCEEEEEeCCCc
Confidence 2322 222222111223455558888888887653
No 34
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.90 E-value=0.065 Score=50.51 Aligned_cols=195 Identities=12% Similarity=0.137 Sum_probs=97.7
Q ss_pred EEEECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEE
Q 016413 124 AIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLD 203 (390)
Q Consensus 124 ~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd 203 (390)
++..++..++.|+.++ .+..||+.+.+-.. .+... ...-.++. .++..++.|+.+ ..+..||
T Consensus 244 ~~~~~~~~l~~~~~dg------~i~iwd~~~~~~~~--~~~~~-~~~v~~~~-~~~~~l~~~~~d--------~~i~i~d 305 (445)
T 2ovr_B 244 CVQYDGRRVVSGAYDF------MVKVWDPETETCLH--TLQGH-TNRVYSLQ-FDGIHVVSGSLD--------TSIRVWD 305 (445)
T ss_dssp EEEECSSCEEEEETTS------CEEEEEGGGTEEEE--EECCC-SSCEEEEE-ECSSEEEEEETT--------SCEEEEE
T ss_pred EEEECCCEEEEEcCCC------EEEEEECCCCcEeE--EecCC-CCceEEEE-ECCCEEEEEeCC--------CeEEEEE
Confidence 3444777788887663 47888887654322 22211 11122333 366677777643 3478899
Q ss_pred CCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEE-ccCCCCCCCceeEEEEC
Q 016413 204 SETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRT-EIPIPRGGPHRACFVFN 282 (390)
Q Consensus 204 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~-~~~~p~~~~~~~~~~~~ 282 (390)
..+.+-.. .+............++.+++.|+.+ ..+..|++ .+.+-.. +...........++..+
T Consensus 306 ~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~-------~~~~~~~~~~~~~~~~~~v~~~~~~ 371 (445)
T 2ovr_B 306 VETGNCIH--TLTGHQSLTSGMELKDNILVSGNAD-----STVKIWDI-------KTGQCLQTLQGPNKHQSAVTCLQFN 371 (445)
T ss_dssp TTTCCEEE--EECCCCSCEEEEEEETTEEEEEETT-----SCEEEEET-------TTCCEEEEECSTTSCSSCEEEEEEC
T ss_pred CCCCCEEE--EEcCCcccEEEEEEeCCEEEEEeCC-----CeEEEEEC-------CCCcEEEEEccCCCCCCCEEEEEEC
Confidence 87765322 1111122223334455566666653 35777774 2332211 11111112223455667
Q ss_pred CEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeE-ECCCCC-CCCCcceeEEEE-ECCEEEEEcCCCC
Q 016413 283 DRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWK-VLPPMP-KPNSHIECAWVI-VNNSIIITGGTTE 358 (390)
Q Consensus 283 ~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~-~~~~~~-~~~~~~~~~~~~-~~~~l~v~GG~~~ 358 (390)
+.+++.|+.++. |.+|| .+.+.. .+.... .+....-.++.. .++.+++.|+.++
T Consensus 372 ~~~l~s~~~dg~----------------------v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 372 KNFVITSSDDGT----------------------VKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp SSEEEEEETTSE----------------------EEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred CCEEEEEeCCCe----------------------EEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCC
Confidence 888888887653 88888 554322 221111 111111112222 3566777888776
Q ss_pred CCCcceeeEEeeeEEEeecCcc
Q 016413 359 KHPMTKRMILVGEVFQFHLDSL 380 (390)
Q Consensus 359 ~~~~~~~~~~~~~v~~yd~~~~ 380 (390)
.... .+++||.+.+
T Consensus 430 ~~~~--------~l~v~df~~~ 443 (445)
T 2ovr_B 430 TEET--------KLLVLDFDVD 443 (445)
T ss_dssp SSCC--------EEEEEECCCC
T ss_pred CCcc--------EEEEEECCCC
Confidence 6331 4777776643
No 35
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.89 E-value=0.047 Score=49.35 Aligned_cols=189 Identities=12% Similarity=0.145 Sum_probs=89.8
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCC--CceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEEC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTD--NKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~--~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (390)
+++.++.|+.++ .+.++|+.. ..++.+..+... ...-.+++. -++.+++.|+.++ .+..||.
T Consensus 118 ~g~~las~s~D~------~v~iwd~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~D~--------~i~iW~~ 182 (330)
T 2hes_X 118 DGYYLATCSRDK------SVWIWETDESGEEYECISVLQEH-SQDVKHVIWHPSEALLASSSYDD--------TVRIWKD 182 (330)
T ss_dssp TSCEEEEEETTS------CEEEEECCTTCCCCEEEEEECCC-SSCEEEEEECSSSSEEEEEETTS--------CEEEEEE
T ss_pred CCCEEEEEeCCC------EEEEEeccCCCCCeEEEEEeccC-CCceEEEEECCCCCEEEEEcCCC--------eEEEEEC
Confidence 567778887764 377788732 345444333321 111122222 2566777777543 3666777
Q ss_pred CCCCeEeCCCCCCCCCCceEEEE-C---CEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCC--CCCceeE
Q 016413 205 ETRKWDSIPPLPSPRYSPATQLW-R---GRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPR--GGPHRAC 278 (390)
Q Consensus 205 ~~~~W~~~~~~p~~r~~~~~~~~-~---~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~--~~~~~~~ 278 (390)
.+..|+.+..+......-..+.+ . +..++.|+.+ ..+..|++..-.- .....|.....++. ...-.++
T Consensus 183 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D-----~~v~iw~~~~~~~-~~~~~~~~~~~~~~~h~~~v~~v 256 (330)
T 2hes_X 183 YDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD-----STVRVWKYMGDDE-DDQQEWVCEAILPDVHKRQVYNV 256 (330)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT-----SCEEEEEEEEECT-TSCEEEEEEEECCSCCSSCEEEE
T ss_pred CCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC-----CeEEEEEecCCCc-cccceeEEeeecccccccceEEE
Confidence 66666655433322111112222 2 3455566543 4577787632110 11234555444432 1111233
Q ss_pred EEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCCCCCCcceeEEEEE----CCEEEEE
Q 016413 279 FVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHIECAWVIV----NNSIIIT 353 (390)
Q Consensus 279 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~~~~~~~~~~~----~~~l~v~ 353 (390)
+...+.+++.||.++. |.+|| .+.+|+.+..............+.. ++++++.
T Consensus 257 ~~s~~~~l~s~~~dg~----------------------v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las 314 (330)
T 2hes_X 257 AWGFNGLIASVGADGV----------------------LAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILAT 314 (330)
T ss_dssp EECTTSCEEEEETTSC----------------------EEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEE
T ss_pred EEcCCCEEEEEeCCCE----------------------EEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEE
Confidence 3334556777776543 77888 6667765432211111101111221 4678888
Q ss_pred cCCCCC
Q 016413 354 GGTTEK 359 (390)
Q Consensus 354 GG~~~~ 359 (390)
||.++.
T Consensus 315 ~s~Dg~ 320 (330)
T 2hes_X 315 GGDDGI 320 (330)
T ss_dssp EETTSE
T ss_pred ecCCCc
Confidence 887643
No 36
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.85 E-value=0.024 Score=49.55 Aligned_cols=114 Identities=15% Similarity=0.120 Sum_probs=70.7
Q ss_pred eeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEcc
Q 016413 157 WVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGG 236 (390)
Q Consensus 157 W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 236 (390)
++-+...|....-+..++...++.||+..|.++ .+.+.++|+++.+=..--+++..-++.+++..+++||+...
T Consensus 31 ~~vv~~~phd~~~ftqGL~~~~~~LyestG~~g------~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw 104 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFYRNGYFYESTGLNG------RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTW 104 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEEETTEEEEEEEETT------EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEES
T ss_pred eEEEEEecCCCCcccceEEEECCEEEEECCCCC------CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEe
Confidence 334444454323344566677999999998654 46789999999875444455544445567788999999965
Q ss_pred CCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeEEEECCEEEEEcC
Q 016413 237 SKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGG 290 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG 290 (390)
.+ ..+.+|| +++.+ .+..++.+..+.+.+.-+++||+.-|
T Consensus 105 ~~-----~~v~v~D-------~~t~~--~~~ti~~~~eG~glt~dg~~L~~SdG 144 (262)
T 3nol_A 105 KN-----GLGFVWN-------IRNLR--QVRSFNYDGEGWGLTHNDQYLIMSDG 144 (262)
T ss_dssp SS-----SEEEEEE-------TTTCC--EEEEEECSSCCCCEEECSSCEEECCS
T ss_pred eC-----CEEEEEE-------CccCc--EEEEEECCCCceEEecCCCEEEEECC
Confidence 32 3455565 34433 33333333344466666777888765
No 37
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.79 E-value=0.031 Score=52.05 Aligned_cols=174 Identities=7% Similarity=-0.009 Sum_probs=77.9
Q ss_pred eeeeeccCCCceEeecCCCCCccccccceEEEecCCCchhHHHhhhcccccccCCCCeEECCCCCCcCCCceEEEECCEE
Q 016413 52 VASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLF 131 (390)
Q Consensus 52 ~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~~~~l 131 (390)
.+..||..+.+...+...... ..-.+++...+...-.....+..+..+|..+.+-... +......-..+..++.+
T Consensus 114 ~v~lw~~~~~~~~~~~~~~~~---~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~ 188 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETDES---TYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRT--MAGHQARVGCLSWNRHV 188 (401)
T ss_dssp EEEEEETTTCCEEEEEECCTT---CCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE--ECCCSSCEEEEEEETTE
T ss_pred eEEEeeCCCCcEeEeeecCCC---CCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEE--ecCCCCceEEEEECCCE
Confidence 678888877776554433211 1112222222211111111123566666655443221 11111222233446677
Q ss_pred EEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-CCEEEEEeceeCCCCCCCCceEEEEECCCCCeE
Q 016413 132 YVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWD 210 (390)
Q Consensus 132 yv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~ 210 (390)
++.|+.++ .+..||+.+..-.. ..+... ...-.+++.. ++.+++.|+.+ ..+.+||..+..-.
T Consensus 189 l~~~~~dg------~i~i~d~~~~~~~~-~~~~~~-~~~v~~~~~~~~~~~l~s~~~d--------~~v~iwd~~~~~~~ 252 (401)
T 4aez_A 189 LSSGSRSG------AIHHHDVRIANHQI-GTLQGH-SSEVCGLAWRSDGLQLASGGND--------NVVQIWDARSSIPK 252 (401)
T ss_dssp EEEEETTS------EEEEEETTSSSCEE-EEEECC-SSCEEEEEECTTSSEEEEEETT--------SCEEEEETTCSSEE
T ss_pred EEEEcCCC------CEEEEecccCccee-eEEcCC-CCCeeEEEEcCCCCEEEEEeCC--------CeEEEccCCCCCcc
Confidence 77887663 58888987433111 111110 1112223332 56677777643 34788998775432
Q ss_pred e-CCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEe
Q 016413 211 S-IPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 211 ~-~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
. +... ...-.+++.. +..+++.||.. ....+..|++
T Consensus 253 ~~~~~~--~~~v~~~~~~p~~~~ll~~~~gs---~d~~i~i~d~ 291 (401)
T 4aez_A 253 FTKTNH--NAAVKAVAWCPWQSNLLATGGGT---MDKQIHFWNA 291 (401)
T ss_dssp EEECCC--SSCCCEEEECTTSTTEEEEECCT---TTCEEEEEET
T ss_pred EEecCC--cceEEEEEECCCCCCEEEEecCC---CCCEEEEEEC
Confidence 1 1111 1111223332 44677776421 1335667764
No 38
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.77 E-value=0.021 Score=52.02 Aligned_cols=104 Identities=10% Similarity=0.091 Sum_probs=58.8
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-C--CEEEEEeceeCCCCCCCCceEEEEEC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-G--RYIYIVSGQYGPQCRGPTSRTFVLDS 204 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (390)
+++.++.|+.++ .+.+||...+++..+..+... ...-.+++.. + +.+++.|+.+ ..+.+||.
T Consensus 22 ~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~l~s~~~d--------g~v~iwd~ 86 (379)
T 3jrp_A 22 YGKRLATCSSDK------TIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYD--------GKVLIWKE 86 (379)
T ss_dssp SSSEEEEEETTS------CEEEEEEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETT--------SCEEEEEE
T ss_pred CCCEEEEEECCC------cEEEEecCCCcceeeeEecCC-CCcEEEEEeCCCCCCCEEEEeccC--------CEEEEEEc
Confidence 456777777653 377888877777665544431 1122233332 2 5677777643 34778888
Q ss_pred CCCCeEeCCCCCCCCCCceEEEE--C--CEEEEEccCCCCCCCCCcceEEe
Q 016413 205 ETRKWDSIPPLPSPRYSPATQLW--R--GRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 205 ~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
.+.+|..+..+.........+.+ + +.+++.|+.+ ..+..|++
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~ 132 (379)
T 3jrp_A 87 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEF 132 (379)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEEC
T ss_pred CCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC-----CcEEEEec
Confidence 88887766544433222233333 2 5567776653 34666665
No 39
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.75 E-value=0.023 Score=51.70 Aligned_cols=140 Identities=15% Similarity=0.214 Sum_probs=73.2
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
+++++++|+.+ ..+.+||+.+.++..+..+... ...-.+++. -++.+++.|+.+ ..+.+||..+
T Consensus 19 ~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~~~~~d--------g~i~vwd~~~ 83 (372)
T 1k8k_C 19 DRTQIAICPNN------HEVHIYEKSGNKWVQVHELKEH-NGQVTGVDWAPDSNRIVTCGTD--------RNAYVWTLKG 83 (372)
T ss_dssp TSSEEEEECSS------SEEEEEEEETTEEEEEEEEECC-SSCEEEEEEETTTTEEEEEETT--------SCEEEEEEET
T ss_pred CCCEEEEEeCC------CEEEEEeCCCCcEEeeeeecCC-CCcccEEEEeCCCCEEEEEcCC--------CeEEEEECCC
Confidence 55677777765 3589999998887666554331 112223333 356677777643 3477888888
Q ss_pred CCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCC--CCCCCceeEEEE-
Q 016413 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPI--PRGGPHRACFVF- 281 (390)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~--p~~~~~~~~~~~- 281 (390)
.++.....+.........+.+ ++++++.|+.+ ..+..|++. ....|...... +....-.+++..
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~d~~------~~~~~~~~~~~~~~~~~~i~~~~~~~ 152 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS-----RVISICYFE------QENDWWVCKHIKKPIRSTVLSLDWHP 152 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETT-----SSEEEEEEE------TTTTEEEEEEECTTCCSCEEEEEECT
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCC-----CEEEEEEec------CCCcceeeeeeecccCCCeeEEEEcC
Confidence 776554322222222222222 45666666643 356777763 33334333222 111111122222
Q ss_pred CCEEEEEcCCCC
Q 016413 282 NDRLFVVGGQEG 293 (390)
Q Consensus 282 ~~~iyv~GG~~~ 293 (390)
++++++.|+.++
T Consensus 153 ~~~~l~~~~~dg 164 (372)
T 1k8k_C 153 NSVLLAAGSCDF 164 (372)
T ss_dssp TSSEEEEEETTS
T ss_pred CCCEEEEEcCCC
Confidence 566777777654
No 40
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.67 E-value=0.023 Score=58.06 Aligned_cols=95 Identities=8% Similarity=0.034 Sum_probs=52.1
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEE--C--CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceE
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--K--NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLG 173 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~--~--~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~ 173 (390)
.+..+|....++..+..+......-..+.+ + +..++.|+.++ .+.+||+.+++|..+..+... ...-.+
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg------~I~vwd~~~~~~~~~~~~~~h-~~~V~~ 104 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG------KVLIWKEENGRWSQIAVHAVH-SASVNS 104 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS------CEEEEEEETTEEEEEEEECCC-SSCEEE
T ss_pred cEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC------eEEEEECCCCcccccccccCC-CCCeEE
Confidence 455556554555544333322222222222 2 67788888764 488889888888766554431 122223
Q ss_pred EEEe-C--CEEEEEeceeCCCCCCCCceEEEEECCCC
Q 016413 174 VVSD-G--RYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (390)
Q Consensus 174 ~~~~-~--~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (390)
++.. + +.+++.|+.+ ..+..||..+.
T Consensus 105 v~~sp~~~~~~l~sgs~d--------g~I~vwdl~~~ 133 (753)
T 3jro_A 105 VQWAPHEYGPLLLVASSD--------GKVSVVEFKEN 133 (753)
T ss_dssp EEECCGGGCSEEEEEETT--------SEEEEEECCSS
T ss_pred EEECCCCCCCEEEEEeCC--------CcEEEEEeecC
Confidence 3332 3 5677777643 45778887765
No 41
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.66 E-value=0.089 Score=46.25 Aligned_cols=99 Identities=14% Similarity=0.063 Sum_probs=64.2
Q ss_pred ceEEEEC-CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEE
Q 016413 122 GAAIQIK-NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTF 200 (390)
Q Consensus 122 ~~~~~~~-~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~ 200 (390)
+.++..+ +.||+..|..+ .+.+.++|+.+.+=...-+++. .....+++..+++||+..- ..+.++
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~tg~v~~~i~l~~--~~fgeGi~~~g~~lyv~t~--------~~~~v~ 89 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG----RSSVRQVALQTGKVENIHKMDD--SYFGEGLTLLNEKLYQVVW--------LKNIGF 89 (266)
T ss_dssp EEEEECSTTEEEEEECSTT----TCEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTEEEEEET--------TCSEEE
T ss_pred ccEEEeCCCeEEEECCCCC----CCEEEEEECCCCCEEEEEecCC--CcceEEEEEeCCEEEEEEe--------cCCEEE
Confidence 4555555 79999887543 2569999999988554333332 2345577788999999963 257799
Q ss_pred EEECCCCCeEeCCCCCCC-CCCceEEEECCEEEEEcc
Q 016413 201 VLDSETRKWDSIPPLPSP-RYSPATQLWRGRLHVMGG 236 (390)
Q Consensus 201 ~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG 236 (390)
+||+.+.+ .+...+.+ ..+..++.-++++|+.-|
T Consensus 90 viD~~t~~--v~~~i~~g~~~g~glt~Dg~~l~vs~g 124 (266)
T 2iwa_A 90 IYDRRTLS--NIKNFTHQMKDGWGLATDGKILYGSDG 124 (266)
T ss_dssp EEETTTTE--EEEEEECCSSSCCEEEECSSSEEEECS
T ss_pred EEECCCCc--EEEEEECCCCCeEEEEECCCEEEEECC
Confidence 99998753 33323222 334445555678998754
No 42
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.65 E-value=0.078 Score=47.77 Aligned_cols=100 Identities=9% Similarity=0.049 Sum_probs=51.6
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
+++.++.|+.++ .+.+||..+.+-... +... ...-.+++. -+++.++.|+.+ ..+..||..+
T Consensus 133 dg~~l~~g~~dg------~v~i~~~~~~~~~~~--~~~~-~~~v~~~~~spdg~~lasg~~d--------g~i~iwd~~~ 195 (321)
T 3ow8_A 133 DSQYLATGTHVG------KVNIFGVESGKKEYS--LDTR-GKFILSIAYSPDGKYLASGAID--------GIINIFDIAT 195 (321)
T ss_dssp TSSEEEEECTTS------EEEEEETTTCSEEEE--EECS-SSCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEcCCC------cEEEEEcCCCceeEE--ecCC-CceEEEEEECCCCCEEEEEcCC--------CeEEEEECCC
Confidence 566777777653 478888876653221 1111 111222333 356677777643 3477889877
Q ss_pred CCeEeCCCCCCCCCC-ceEEE-ECCEEEEEccCCCCCCCCCcceEEe
Q 016413 207 RKWDSIPPLPSPRYS-PATQL-WRGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 207 ~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
.+-.. .+...... .+++. -++++++.|+.+ ..+..|++
T Consensus 196 ~~~~~--~~~~h~~~v~~l~~spd~~~l~s~s~d-----g~i~iwd~ 235 (321)
T 3ow8_A 196 GKLLH--TLEGHAMPIRSLTFSPDSQLLVTASDD-----GYIKIYDV 235 (321)
T ss_dssp TEEEE--EECCCSSCCCEEEECTTSCEEEEECTT-----SCEEEEET
T ss_pred CcEEE--EEcccCCceeEEEEcCCCCEEEEEcCC-----CeEEEEEC
Confidence 64321 11111111 12222 256677777654 35677774
No 43
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.64 E-value=0.068 Score=46.79 Aligned_cols=96 Identities=14% Similarity=0.094 Sum_probs=67.2
Q ss_pred ceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEE
Q 016413 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFV 201 (390)
Q Consensus 122 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~ 201 (390)
.++...++.||+..|.++ .+.++|+++.+=...- ++. .-+..+++..+++||+.... .+.+++
T Consensus 58 qGL~~~~~~Ly~stG~~g------~v~~iD~~Tgkv~~~~-l~~--~~FgeGit~~g~~Ly~ltw~--------~~~v~V 120 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG------TLRQLSLESAQPVWME-RLG--NIFAEGLASDGERLYQLTWT--------EGLLFT 120 (268)
T ss_dssp EEEEEETTEEEEEETTTT------EEEECCSSCSSCSEEE-ECT--TCCEEEEEECSSCEEEEESS--------SCEEEE
T ss_pred ceEEEECCEEEEEcCCCC------EEEEEECCCCcEEeEE-CCC--CcceeEEEEeCCEEEEEEcc--------CCEEEE
Confidence 455566899999999764 2889999988754332 443 23456688889999998542 577999
Q ss_pred EECCCCCeEeCCCCCCCCCCceEEEECCEEEEEcc
Q 016413 202 LDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGG 236 (390)
Q Consensus 202 yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 236 (390)
||+++.+= +...+.+..+.+++..+++||+.-|
T Consensus 121 ~D~~Tl~~--~~ti~~~~eGwGLt~Dg~~L~vSdG 153 (268)
T 3nok_A 121 WSGMPPQR--ERTTRYSGEGWGLCYWNGKLVRSDG 153 (268)
T ss_dssp EETTTTEE--EEEEECSSCCCCEEEETTEEEEECS
T ss_pred EECCcCcE--EEEEeCCCceeEEecCCCEEEEECC
Confidence 99987643 3333333445677778889999965
No 44
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.54 E-value=0.31 Score=45.93 Aligned_cols=145 Identities=12% Similarity=0.131 Sum_probs=73.0
Q ss_pred eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCC-ceEEE-ECCEEEEEccCCCCCCCCCcceEEeeee
Q 016413 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYS-PATQL-WRGRLHVMGGSKENRHTPGLEHWSIAVK 254 (390)
Q Consensus 177 ~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 254 (390)
.++.+++.|+.+ ..+..||..+.+-.. .+...... .+++. -++..++.|+.+ ..+..|++
T Consensus 278 ~~~~~l~~~~~d--------~~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~sg~~d-----g~i~vwd~--- 339 (464)
T 3v7d_B 278 GHGNIVVSGSYD--------NTLIVWDVAQMKCLY--ILSGHTDRIYSTIYDHERKRCISASMD-----TTIRIWDL--- 339 (464)
T ss_dssp EETTEEEEEETT--------SCEEEEETTTTEEEE--EECCCSSCEEEEEEETTTTEEEEEETT-----SCEEEEET---
T ss_pred CCCCEEEEEeCC--------CeEEEEECCCCcEEE--EecCCCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEEC---
Confidence 345566666543 347888987654322 11111111 12222 245566666653 35777774
Q ss_pred ccccccCCeEEccCCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCC
Q 016413 255 DGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMP 333 (390)
Q Consensus 255 ~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~ 333 (390)
.+.+ .+..+........++..++..++.|+.++. +.+|| .+..-.......
T Consensus 340 ----~~~~--~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~----------------------v~vwd~~~~~~~~~~~~~ 391 (464)
T 3v7d_B 340 ----ENGE--LMYTLQGHTALVGLLRLSDKFLVSAAADGS----------------------IRGWDANDYSRKFSYHHT 391 (464)
T ss_dssp ----TTTE--EEEEECCCSSCEEEEEECSSEEEEEETTSE----------------------EEEEETTTCCEEEEEECT
T ss_pred ----CCCc--EEEEEeCCCCcEEEEEEcCCEEEEEeCCCc----------------------EEEEECCCCceeeeecCC
Confidence 2222 222222222223455667788888887653 77887 443211111111
Q ss_pred CCCCcceeEEEEECCEEEEEcCCCCCCCcceeeEEeeeEEEeecCcccee
Q 016413 334 KPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLVII 383 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 383 (390)
. . ....+...++++++.|+ ++ .+.+||+++.+-.
T Consensus 392 ~--~-~~~~~~~~~~~~l~~~~-dg------------~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 392 N--L-SAITTFYVSDNILVSGS-EN------------QFNIYNLRSGKLV 425 (464)
T ss_dssp T--C-CCEEEEEECSSEEEEEE-TT------------EEEEEETTTCCEE
T ss_pred C--C-ccEEEEEeCCCEEEEec-CC------------eEEEEECCCCcEE
Confidence 1 1 12233566777777776 21 3788888776543
No 45
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.45 E-value=0.055 Score=49.99 Aligned_cols=67 Identities=9% Similarity=0.062 Sum_probs=34.5
Q ss_pred EEECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEE
Q 016413 125 IQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLD 203 (390)
Q Consensus 125 ~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd 203 (390)
....+..+++|+.++ .+..||+.+.+-... +... ...-.+++. -++.+++.|+.+ ..+.+||
T Consensus 213 ~~~~~~~~~~~~~~g------~i~~~d~~~~~~~~~--~~~~-~~~i~~~~~~~~~~~l~~~~~d--------~~i~i~d 275 (425)
T 1r5m_A 213 EWVDDDKFVIPGPKG------AIFVYQITEKTPTGK--LIGH-HGPISVLEFNDTNKLLLSASDD--------GTLRIWH 275 (425)
T ss_dssp EEEETTEEEEECGGG------CEEEEETTCSSCSEE--ECCC-SSCEEEEEEETTTTEEEEEETT--------SCEEEEC
T ss_pred EEcCCCEEEEEcCCC------eEEEEEcCCCceeee--eccC-CCceEEEEECCCCCEEEEEcCC--------CEEEEEE
Confidence 333444566776553 488999887643211 1111 111222333 355566666533 3477888
Q ss_pred CCCCC
Q 016413 204 SETRK 208 (390)
Q Consensus 204 ~~~~~ 208 (390)
..+.+
T Consensus 276 ~~~~~ 280 (425)
T 1r5m_A 276 GGNGN 280 (425)
T ss_dssp SSSBS
T ss_pred CCCCc
Confidence 76643
No 46
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.40 E-value=0.048 Score=49.68 Aligned_cols=185 Identities=9% Similarity=0.140 Sum_probs=92.7
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
++++++.||.++ .+.++|..+++|.....+...-...-.+++. -++.+++.|+.++ .+.+||..+
T Consensus 27 ~g~~las~~~D~------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~--------~v~iw~~~~ 92 (345)
T 3fm0_A 27 AGTLLASCGGDR------RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA--------TTCIWKKNQ 92 (345)
T ss_dssp TSSCEEEEETTS------CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS--------CEEEEEECC
T ss_pred CCCEEEEEcCCC------eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC--------cEEEEEccC
Confidence 567888888764 3778888888875432221111122223333 2566777777543 356677766
Q ss_pred CCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeEEE--EC
Q 016413 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFV--FN 282 (390)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~--~~ 282 (390)
..++.+..+.........+.+ ++++++.|+.+ ..+..|++. ....+..+..+.........+. -+
T Consensus 93 ~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D-----~~v~iwd~~------~~~~~~~~~~~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD-----KSVWVWEVD------EEDEYECVSVLNSHTQDVKHVVWHPS 161 (345)
T ss_dssp C-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEEC------TTSCEEEEEEECCCCSCEEEEEECSS
T ss_pred CCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC-----CeEEEEECC------CCCCeEEEEEecCcCCCeEEEEECCC
Confidence 666554433322222222222 56677777654 457788862 2233333322221111112222 25
Q ss_pred CEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCCCCCCcceeEEEEECCEEEEEcCCCCC
Q 016413 283 DRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHIECAWVIVNNSIIITGGTTEK 359 (390)
Q Consensus 283 ~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~ 359 (390)
+++++.|+.++. |..|| .+..|..+..+..........+...+++.++.|+.++.
T Consensus 162 ~~~l~s~s~d~~----------------------i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~ 217 (345)
T 3fm0_A 162 QELLASASYDDT----------------------VKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT 217 (345)
T ss_dssp SSCEEEEETTSC----------------------EEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCEEEEEeCCCc----------------------EEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe
Confidence 667777776643 77787 66666644333322222211112235667777776543
No 47
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.39 E-value=0.11 Score=46.06 Aligned_cols=100 Identities=12% Similarity=0.128 Sum_probs=51.5
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
++++++.|+.++ .+.+||..+.+-... +... ...-.+++. -++.+++.|+.+ ..+..||+.+
T Consensus 76 ~~~~l~s~~~d~------~i~vwd~~~~~~~~~--~~~~-~~~v~~~~~~~~~~~l~s~~~d--------~~i~iwd~~~ 138 (312)
T 4ery_A 76 DSNLLVSASDDK------TLKIWDVSSGKCLKT--LKGH-SNYVFCCNFNPQSNLIVSGSFD--------ESVRIWDVKT 138 (312)
T ss_dssp TSSEEEEEETTS------EEEEEETTTCCEEEE--EECC-SSCEEEEEECSSSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEECCCC------EEEEEECCCCcEEEE--EcCC-CCCEEEEEEcCCCCEEEEEeCC--------CcEEEEECCC
Confidence 567778887663 588899887653221 1110 011112222 255667777643 3477889877
Q ss_pred CCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEe
Q 016413 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
.+-.. .++........+.+ ++.+++.|+.+ ..+..|++
T Consensus 139 ~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~wd~ 178 (312)
T 4ery_A 139 GKCLK--TLPAHSDPVSAVHFNRDGSLIVSSSYD-----GLCRIWDT 178 (312)
T ss_dssp CCEEE--EECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEET
T ss_pred CEEEE--EecCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEEC
Confidence 54322 12211111222222 55677777654 35677774
No 48
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.36 E-value=0.36 Score=41.53 Aligned_cols=90 Identities=13% Similarity=0.048 Sum_probs=49.7
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-CCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
+++|||... + ..+.+||+.++....+..... ..-.+++.. +++||+.... ...+.+||..+
T Consensus 77 ~g~l~v~~~-~------~~i~~~d~~~~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~~--------~~~i~~~~~~~ 138 (270)
T 1rwi_B 77 AGTVYVTDF-N------NRVVTLAAGSNNQTVLPFDGL---NYPEGLAVDTQGAVYVADRG--------NNRVVKLAAGS 138 (270)
T ss_dssp TCCEEEEET-T------TEEEEECTTCSCCEECCCCSC---SSEEEEEECTTCCEEEEEGG--------GTEEEEECTTC
T ss_pred CCCEEEEcC-C------CEEEEEeCCCceEeeeecCCc---CCCcceEECCCCCEEEEECC--------CCEEEEEECCC
Confidence 467888765 2 358999998876544422111 122344443 6789987532 34688888776
Q ss_pred CCeEeCCCCCCCCCCceEEEE-CCEEEEEcc
Q 016413 207 RKWDSIPPLPSPRYSPATQLW-RGRLHVMGG 236 (390)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG 236 (390)
........... ..-..++.. +++||+...
T Consensus 139 ~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~ 168 (270)
T 1rwi_B 139 KTQTVLPFTGL-NDPDGVAVDNSGNVYVTDT 168 (270)
T ss_dssp CSCEECCCCSC-CSCCCEEECTTCCEEEEEG
T ss_pred ceeEeeccccC-CCceeEEEeCCCCEEEEEC
Confidence 65544322111 112233333 577888754
No 49
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.35 E-value=0.13 Score=45.17 Aligned_cols=168 Identities=13% Similarity=0.034 Sum_probs=92.8
Q ss_pred eeecCCCCCCCCCcceEEEEeC-CEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEc
Q 016413 157 WVDRFDMPKDMAHSHLGVVSDG-RYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMG 235 (390)
Q Consensus 157 W~~~~~l~~~~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 235 (390)
.+.+...|.+...+-++++..+ +.||+..|..+ .+.+.++|+.+.+=...-+++.......++..+++||+..
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~------~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t 82 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYG------RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVV 82 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTT------TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEE
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCC------CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEE
Confidence 3344444443222335666665 89999877322 4679999999987544334444334456777899999996
Q ss_pred cCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCC-CCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceec
Q 016413 236 GSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRG-GPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVY 314 (390)
Q Consensus 236 G~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~-~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 314 (390)
-. .+.+.++| +. +.+.+..+|.+ ..+.+.+.-++++|+.-|.
T Consensus 83 ~~-----~~~v~viD-------~~--t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs----------------------- 125 (266)
T 2iwa_A 83 WL-----KNIGFIYD-------RR--TLSNIKNFTHQMKDGWGLATDGKILYGSDGT----------------------- 125 (266)
T ss_dssp TT-----CSEEEEEE-------TT--TTEEEEEEECCSSSCCEEEECSSSEEEECSS-----------------------
T ss_pred ec-----CCEEEEEE-------CC--CCcEEEEEECCCCCeEEEEECCCEEEEECCC-----------------------
Confidence 43 23455555 23 33333333322 2233455556779887652
Q ss_pred CcEEeeC-CCCC-eEECC--CCCCCCCcceeEEEEECCEEEEEcCCCCCCCcceeeEEeeeEEEeecCcc
Q 016413 315 GDVYMLD-DEMK-WKVLP--PMPKPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSL 380 (390)
Q Consensus 315 ~~v~~yd-~~~~-W~~~~--~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 380 (390)
+.+.++| .+.+ -..++ ..+.|..... .+...++++|+--..+ ++|.+.|+++.
T Consensus 126 ~~l~viD~~t~~v~~~I~Vg~~~~p~~~~n-ele~~dg~lyvn~~~~------------~~V~vID~~tg 182 (266)
T 2iwa_A 126 SILYEIDPHTFKLIKKHNVKYNGHRVIRLN-ELEYINGEVWANIWQT------------DCIARISAKDG 182 (266)
T ss_dssp SEEEEECTTTCCEEEEEECEETTEECCCEE-EEEEETTEEEEEETTS------------SEEEEEETTTC
T ss_pred CeEEEEECCCCcEEEEEEECCCCcccccce-eEEEECCEEEEecCCC------------CeEEEEECCCC
Confidence 2499999 4432 22222 2222222211 2234488888764321 25778888765
No 50
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.33 E-value=0.32 Score=43.59 Aligned_cols=97 Identities=15% Similarity=0.050 Sum_probs=49.7
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEE-C-CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCC------CC
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-K-NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM------AH 169 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~-~-~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~------~r 169 (390)
.++.+|..+.+-...-+. ...-..++.. + +++|+.+..+ ..+.++|+.+.+-...-+++... +.
T Consensus 70 ~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 141 (353)
T 3vgz_A 70 VVYRLDPVTLEVTQAIHN--DLKPFGATINNTTQTLWFGNTVN------SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPL 141 (353)
T ss_dssp EEEEECTTTCCEEEEEEE--SSCCCSEEEETTTTEEEEEETTT------TEEEEEETTTCCEEEEEESCCCCCCSSCCCC
T ss_pred cEEEEcCCCCeEEEEEec--CCCcceEEECCCCCEEEEEecCC------CEEEEEeCCCCeeEEEEecCCCccccccCCC
Confidence 577777766543221111 1112333333 3 4588876643 36999999887643222221110 01
Q ss_pred cceEEEE--eCCEEEEEeceeCCCCCCCCceEEEEECCCCCe
Q 016413 170 SHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKW 209 (390)
Q Consensus 170 ~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W 209 (390)
.-..++. .++.+|+.+.. ....++++|+.+.+-
T Consensus 142 ~~~~~~~s~dg~~l~~~~~~-------~~~~i~~~d~~~~~~ 176 (353)
T 3vgz_A 142 QPRELVADDATNTVYISGIG-------KESVIWVVDGGNIKL 176 (353)
T ss_dssp EEEEEEEETTTTEEEEEEES-------SSCEEEEEETTTTEE
T ss_pred CCceEEECCCCCEEEEEecC-------CCceEEEEcCCCCce
Confidence 1223333 34667777631 135689999987643
No 51
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.31 E-value=0.067 Score=50.33 Aligned_cols=139 Identities=10% Similarity=0.065 Sum_probs=72.4
Q ss_pred EEEECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEE
Q 016413 124 AIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLD 203 (390)
Q Consensus 124 ~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd 203 (390)
+...++..++.|+.++ .+.+||..+.+-... +.. ..........++.+++.|+.+ ..+.+||
T Consensus 138 ~~~~d~~~l~~g~~dg------~i~iwd~~~~~~~~~--~~~--h~~~v~~l~~~~~~l~sg~~d--------g~i~vwd 199 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDN------TIKIWDKNTLECKRI--LTG--HTGSVLCLQYDERVIITGSSD--------STVRVWD 199 (435)
T ss_dssp EEECCSSEEEEEESSS------CEEEEESSSCCEEEE--ECC--CSSCEEEEECCSSEEEEEETT--------SCEEEEE
T ss_pred EEEECCCEEEEEeCCC------eEEEEeCCCCeEEEE--EcC--CCCcEEEEEECCCEEEEEcCC--------CeEEEEE
Confidence 3445778888888764 488899877654322 221 112223333477788888754 3477888
Q ss_pred CCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeEEEECC
Q 016413 204 SETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFND 283 (390)
Q Consensus 204 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~ 283 (390)
..+.+-.. .+.........+..++.+++.|+.+ ..+..|++. ..........+........++..++
T Consensus 200 ~~~~~~~~--~~~~h~~~v~~l~~~~~~l~s~s~d-----g~i~vwd~~------~~~~~~~~~~~~~~~~~v~~~~~~~ 266 (435)
T 1p22_A 200 VNTGEMLN--TLIHHCEAVLHLRFNNGMMVTCSKD-----RSIAVWDMA------SPTDITLRRVLVGHRAAVNVVDFDD 266 (435)
T ss_dssp SSSCCEEE--EECCCCSCEEEEECCTTEEEEEETT-----SCEEEEECS------SSSCCEEEEEECCCSSCEEEEEEET
T ss_pred CCCCcEEE--EEcCCCCcEEEEEEcCCEEEEeeCC-----CcEEEEeCC------CCCCceeeeEecCCCCcEEEEEeCC
Confidence 87765322 1222222223334456667777654 357777752 1122211111111111223444577
Q ss_pred EEEEEcCCCC
Q 016413 284 RLFVVGGQEG 293 (390)
Q Consensus 284 ~iyv~GG~~~ 293 (390)
..++.|+.++
T Consensus 267 ~~l~s~~~dg 276 (435)
T 1p22_A 267 KYIVSASGDR 276 (435)
T ss_dssp TEEEEEETTS
T ss_pred CEEEEEeCCC
Confidence 7777777654
No 52
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.29 E-value=0.6 Score=42.11 Aligned_cols=202 Identities=13% Similarity=0.107 Sum_probs=102.3
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEE-CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~ 176 (390)
.++.-.-...+|+.+.. +....-.++... .+.+|++|- . ..+++-.-...+|+.+............+++.
T Consensus 16 ~~~~s~d~g~~W~~~~~-~~~~~~~~v~~~~~~~~~~~G~-~------g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~ 87 (327)
T 2xbg_A 16 GSAIPALDYNPWEAIQL-PTTATILDMSFIDRHHGWLVGV-N------ATLMETRDGGQTWEPRTLVLDHSDYRFNSVSF 87 (327)
T ss_dssp --CCCBCSSCCEEEEEC-SCSSCEEEEEESSSSCEEEEET-T------TEEEEESSTTSSCEECCCCCSCCCCEEEEEEE
T ss_pred ceeecCCCCCCceEeec-CCCCcEEEEEECCCCcEEEEcC-C------CeEEEeCCCCCCCeECCCCCCCCCccEEEEEe
Confidence 45555556779988753 322222333332 457888653 2 12555444467899875321111223445556
Q ss_pred eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCC-CCCCCceEE-EECCEEEEEccCCCCCCCCCcceEEeeee
Q 016413 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLP-SPRYSPATQ-LWRGRLHVMGGSKENRHTPGLEHWSIAVK 254 (390)
Q Consensus 177 ~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 254 (390)
.++.+|++|- ...+++-+-.-.+|+.+.... .+.....++ .-++.+|+.|... ..|...
T Consensus 88 ~~~~~~~~g~---------~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g--------~v~~S~-- 148 (327)
T 2xbg_A 88 QGNEGWIVGE---------PPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVG--------AIYRTK-- 148 (327)
T ss_dssp ETTEEEEEEE---------TTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTC--------CEEEES--
T ss_pred cCCeEEEEEC---------CCeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCc--------cEEEEc--
Confidence 6788998762 124555444457899987431 222223333 3467888876421 122210
Q ss_pred ccccccCCeEEccCCCCCCCceeEEEE-CCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-C-CCCeEECCC
Q 016413 255 DGKALEKAWRTEIPIPRGGPHRACFVF-NDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-D-EMKWKVLPP 331 (390)
Q Consensus 255 ~~~~~~~~W~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~-~~~W~~~~~ 331 (390)
....+|+.+....... .++++.. +++++++|- .+ .+++-+ . ...|+.+..
T Consensus 149 ---DgG~tW~~~~~~~~~~-~~~~~~~~~~~~~~~g~-~G----------------------~~~~S~d~gG~tW~~~~~ 201 (327)
T 2xbg_A 149 ---DSGKNWQALVQEAIGV-MRNLNRSPSGEYVAVSS-RG----------------------SFYSTWEPGQTAWEPHNR 201 (327)
T ss_dssp ---STTSSEEEEECSCCCC-EEEEEECTTSCEEEEET-TS----------------------SEEEEECTTCSSCEEEEC
T ss_pred ---CCCCCCEEeecCCCcc-eEEEEEcCCCcEEEEEC-CC----------------------cEEEEeCCCCCceeECCC
Confidence 2456899875432222 2233333 456666553 22 155554 4 579998853
Q ss_pred CCCCCCcceeEEEEECCEEEEEcC
Q 016413 332 MPKPNSHIECAWVIVNNSIIITGG 355 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~l~v~GG 355 (390)
+.+...... ++.-++.+|+.+.
T Consensus 202 -~~~~~~~~~-~~~~~g~~~~~~~ 223 (327)
T 2xbg_A 202 -TTSRRLHNM-GFTPDGRLWMIVN 223 (327)
T ss_dssp -CSSSCEEEE-EECTTSCEEEEET
T ss_pred -CCCCcccee-EECCCCCEEEEeC
Confidence 222222211 1223567777653
No 53
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.24 E-value=0.21 Score=43.89 Aligned_cols=55 Identities=18% Similarity=0.143 Sum_probs=27.9
Q ss_pred EEeeC-CCCCeEECCCCCCCCCcceeEEEEECCEEEEEcCCCCCCCcceeeEEeeeEEEeecCccceeecc
Q 016413 317 VYMLD-DEMKWKVLPPMPKPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLVIIYHY 386 (390)
Q Consensus 317 v~~yd-~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~ 386 (390)
|.+|| .+.+....-..+ ...........+++ ++.|+.++ .+.+||+.++++....
T Consensus 248 v~iwd~~~~~~~~~~~~~--~~~i~~~~~~~~~~-~~~~~~dg------------~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 248 VRIWSKENGSLKQVITLP--AISIWSVDCMSNGD-IIVGSSDN------------LVRIFSQEKSRWASED 303 (313)
T ss_dssp EEEECTTTCCEEEEEECS--SSCEEEEEECTTSC-EEEEETTS------------CEEEEESCGGGCCC--
T ss_pred EEEEECCCCceeEEEecc--CceEEEEEEccCCC-EEEEeCCC------------cEEEEeCCCCceeehh
Confidence 88888 554432221122 11121211223556 45566543 3889999988876543
No 54
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.23 E-value=0.47 Score=41.89 Aligned_cols=65 Identities=11% Similarity=0.184 Sum_probs=36.7
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
++.+++.|+.++ .+.+||+.+.+-.. .++.. ...-.+++. -++.+++.|+.+ ..+..||..+
T Consensus 118 ~~~~l~s~~~d~------~i~iwd~~~~~~~~--~~~~~-~~~v~~~~~~~~~~~l~~~~~d--------~~i~~wd~~~ 180 (312)
T 4ery_A 118 QSNLIVSGSFDE------SVRIWDVKTGKCLK--TLPAH-SDPVSAVHFNRDGSLIVSSSYD--------GLCRIWDTAS 180 (312)
T ss_dssp SSSEEEEEETTS------CEEEEETTTCCEEE--EECCC-SSCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEeCCC------cEEEEECCCCEEEE--EecCC-CCcEEEEEEcCCCCEEEEEeCC--------CcEEEEECCC
Confidence 456777787764 48889988765322 12211 011122222 356677777643 3477889877
Q ss_pred CCe
Q 016413 207 RKW 209 (390)
Q Consensus 207 ~~W 209 (390)
.+-
T Consensus 181 ~~~ 183 (312)
T 4ery_A 181 GQC 183 (312)
T ss_dssp CCE
T ss_pred Cce
Confidence 654
No 55
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.20 E-value=0.094 Score=48.94 Aligned_cols=97 Identities=12% Similarity=0.034 Sum_probs=52.5
Q ss_pred cccccccCCCCeEECCCCCC---cCCCceEEEE--CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcce
Q 016413 98 TFADLPAPDLEWEQMPSAPV---PRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHL 172 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~---~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~ 172 (390)
.+..+|..+.+.....+... ....-..+.+ ++++|+.++.+ ..+.+||+.+.+-...-.... ..-.
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d------~~v~~~d~~~~~~~~~~~~~~---~~~~ 215 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA------NAVHVFDLKTLAYKATVDLTG---KWSK 215 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG------TEEEEEETTTCCEEEEEECSS---SSEE
T ss_pred eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC------CEEEEEECCCceEEEEEcCCC---CCee
Confidence 47777777666544332211 1111112233 67888888755 358999988765432211111 1122
Q ss_pred EEEE--eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEe
Q 016413 173 GVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDS 211 (390)
Q Consensus 173 ~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~ 211 (390)
+++. .+..+|+.++. ...+.+||+.+.+...
T Consensus 216 ~~~~~~~~~~l~~~~~~--------~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 216 ILLYDPIRDLVYCSNWI--------SEDISVIDRKTKLEIR 248 (433)
T ss_dssp EEEEETTTTEEEEEETT--------TTEEEEEETTTTEEEE
T ss_pred EEEEcCCCCEEEEEecC--------CCcEEEEECCCCcEEE
Confidence 3333 25567777642 3468899998776543
No 56
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.19 E-value=0.024 Score=52.26 Aligned_cols=98 Identities=15% Similarity=0.237 Sum_probs=52.7
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE--eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
+.+|+.|+.+ ..+.++|+.+++-...-.... .-.+++. .+..||+.++. -..+.+||+.+
T Consensus 2 ~~l~vs~~~d------~~v~v~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~--------d~~i~v~d~~~ 63 (391)
T 1l0q_A 2 TFAYIANSES------DNISVIDVTSNKVTATIPVGS----NPMGAVISPDGTKVYVANAH--------SNDVSIIDTAT 63 (391)
T ss_dssp EEEEEEETTT------TEEEEEETTTTEEEEEEECSS----SEEEEEECTTSSEEEEEEGG--------GTEEEEEETTT
T ss_pred CEEEEEcCCC------CEEEEEECCCCeEEEEeecCC----CcceEEECCCCCEEEEECCC--------CCeEEEEECCC
Confidence 4678887765 358999998876543222221 1223333 24467787753 34688899987
Q ss_pred CCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEe
Q 016413 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
.+-...-+.. ..-.+++.. ++.||+.+... ..+.+|++
T Consensus 64 ~~~~~~~~~~--~~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~ 103 (391)
T 1l0q_A 64 NNVIATVPAG--SSPQGVAVSPDGKQVYVTNMAS-----STLSVIDT 103 (391)
T ss_dssp TEEEEEEECS--SSEEEEEECTTSSEEEEEETTT-----TEEEEEET
T ss_pred CeEEEEEECC--CCccceEECCCCCEEEEEECCC-----CEEEEEEC
Confidence 7543322222 222223322 34566665432 34666664
No 57
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.19 E-value=0.14 Score=46.74 Aligned_cols=134 Identities=12% Similarity=0.017 Sum_probs=63.0
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEE--CCEEEEEecCCCCCCCCCeEEEEeCCCCc-eeecCCCCCCCCCcceEE
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNK-WVDRFDMPKDMAHSHLGV 174 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~~-W~~~~~l~~~~~r~~~~~ 174 (390)
.+..++..+..|+.+..+......-..+.+ ++++++.|+.++ .+.+||+.+.. |.....+... ...-.++
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~------~v~vwd~~~~~~~~~~~~~~~~-~~~v~~~ 106 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR------NAYVYEKRPDGTWKQTLVLLRL-NRAATFV 106 (377)
T ss_dssp CBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS------SEEEC------CCCCEEECCCC-SSCEEEE
T ss_pred EEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC------eEEEEEcCCCCceeeeeEeccc-CCceEEE
Confidence 566777777777766655433222222222 457777887663 48888888776 5544333221 1112222
Q ss_pred EE-eCCEEEEEeceeCCCCCCCCceEEEEECCCCC-eEeCCCCCC-CCCC-ceEEEE-CCEEEEEccCCCCCCCCCcceE
Q 016413 175 VS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK-WDSIPPLPS-PRYS-PATQLW-RGRLHVMGGSKENRHTPGLEHW 249 (390)
Q Consensus 175 ~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~-W~~~~~~p~-~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~ 249 (390)
+. -++++++.|+.+ ..+.+||..+.. |..+..+.. .... .+++.. ++++++.|+.+ ..+..|
T Consensus 107 ~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw 173 (377)
T 3dwl_C 107 RWSPNEDKFAVGSGA--------RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD-----RKAYVL 173 (377)
T ss_dssp ECCTTSSCCEEEESS--------SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS-----SCEEEE
T ss_pred EECCCCCEEEEEecC--------CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC-----CEEEEE
Confidence 22 256677777643 336677776654 433332222 1111 122222 45677777654 356777
Q ss_pred Ee
Q 016413 250 SI 251 (390)
Q Consensus 250 ~~ 251 (390)
++
T Consensus 174 d~ 175 (377)
T 3dwl_C 174 SA 175 (377)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 58
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.08 E-value=0.1 Score=48.76 Aligned_cols=194 Identities=7% Similarity=-0.007 Sum_probs=87.4
Q ss_pred ccEEEEecCCCCCCCccccceeeeeccCCCceEeecCCCCCcccc-ccceEEEecCCCchhHHHhhhcccccccCCCCeE
Q 016413 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDR-QRESVAVIDKKGQDAERFLSATFADLPAPDLEWE 110 (390)
Q Consensus 32 ~~~l~~~GG~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 110 (390)
++.+++.++. ++ .+..||+.+.+.............. .-.+++...+...-........+..+|..+.+-.
T Consensus 133 ~~~~~~~~~~-~~-------~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~ 204 (433)
T 3bws_A 133 NTRLAIPLLE-DE-------GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYK 204 (433)
T ss_dssp SSEEEEEBTT-SS-------SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEE
T ss_pred CCeEEEEeCC-CC-------eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEE
Confidence 5677777765 44 5788898877765533321100000 1111222111111011112236677776654432
Q ss_pred ECCCCCCcCCCceEEEE--CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-CCEEEEEece
Q 016413 111 QMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQ 187 (390)
Q Consensus 111 ~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~~~iyv~GG~ 187 (390)
..-... ...-.+++.. +..+|+.++.+ ..+.+||+.+.+....-... ..-.+++.. +++.+++++.
T Consensus 205 ~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~----~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 205 ATVDLT-GKWSKILLYDPIRDLVYCSNWIS------EDISVIDRKTKLEIRKTDKI----GLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp EEEECS-SSSEEEEEEETTTTEEEEEETTT------TEEEEEETTTTEEEEECCCC----SEEEEEEECTTSSEEEEEEE
T ss_pred EEEcCC-CCCeeEEEEcCCCCEEEEEecCC------CcEEEEECCCCcEEEEecCC----CCceEEEEcCCCCEEEEEEC
Confidence 211111 1111222333 34677776554 25899999887654432221 112233332 4544445544
Q ss_pred eCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEe
Q 016413 188 YGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 188 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
........-..+.+||+.+.+-......+. ....++.. ++.+|+.++.+ ..+..|++
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~g~~l~~~~~~~-----~~v~v~d~ 332 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKLIDTIGPPG--NKRHIVSGNTENKIYVSDMCC-----SKIEVYDL 332 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEEEEEEEEEE--CEEEEEECSSTTEEEEEETTT-----TEEEEEET
T ss_pred CCCccccCCCeEEEEECCCCcEEeeccCCC--CcceEEECCCCCEEEEEecCC-----CEEEEEEC
Confidence 332210124578999998765332211111 11112222 34688876543 34666663
No 59
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.04 E-value=0.037 Score=56.52 Aligned_cols=104 Identities=10% Similarity=0.093 Sum_probs=60.5
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eC--CEEEEEeceeCCCCCCCCceEEEEEC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DG--RYIYIVSGQYGPQCRGPTSRTFVLDS 204 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~--~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (390)
+++.++.|+.++ .+.+||..++++..+..+... ...-.+++. .+ +.+++.|+.+ ..+.+||.
T Consensus 20 dg~~latg~~dg------~I~vwd~~~~~~~~~~~l~~h-~~~V~~l~~s~~~~~~~l~s~s~D--------g~I~vwd~ 84 (753)
T 3jro_A 20 YGKRLATCSSDK------TIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYD--------GKVLIWKE 84 (753)
T ss_dssp SSCCEEEEETTT------EEEEEEEETTEEEEEEEECCC-SSCEEEEEECCTTSCSEEEEEETT--------SCEEEEEE
T ss_pred CCCeEEEEECCC------cEEEEecCCCCCccceeccCC-cCceEEEEecCCCCCCEEEEEeCC--------CeEEEEEC
Confidence 456777777653 488888877777766555431 112223333 23 6677777654 34778888
Q ss_pred CCCCeEeCCCCCCCCCCceEEEE--C--CEEEEEccCCCCCCCCCcceEEe
Q 016413 205 ETRKWDSIPPLPSPRYSPATQLW--R--GRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 205 ~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
.+..|..+..+.........+.+ + +.+++.|+.+ ..+..|++
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d-----g~I~vwdl 130 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEF 130 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEEC
T ss_pred CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC-----CcEEEEEe
Confidence 88877666544333333333333 2 5677777754 34666765
No 60
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.03 E-value=0.013 Score=53.69 Aligned_cols=140 Identities=13% Similarity=0.162 Sum_probs=65.9
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
++++++.|+.++ .+.+||+.++.|..+..+.... ..-.+++. -++.+++.|+.+ ..+.+||..+
T Consensus 22 ~g~~l~~~~~d~------~i~iw~~~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~d--------~~v~vwd~~~ 86 (377)
T 3dwl_C 22 QRTEFVTTTATN------QVELYEQDGNGWKHARTFSDHD-KIVTCVDWAPKSNRIVTCSQD--------RNAYVYEKRP 86 (377)
T ss_dssp SSSEEECCCSSS------CBCEEEEETTEEEECCCBCCCS-SCEEEEEECTTTCCEEEEETT--------SSEEEC----
T ss_pred CCCEEEEecCCC------EEEEEEccCCceEEEEEEecCC-ceEEEEEEeCCCCEEEEEeCC--------CeEEEEEcCC
Confidence 566777777653 4777888888888777665421 12223333 256677777643 3477788877
Q ss_pred CC-eEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCC--CCCceeEEEE
Q 016413 207 RK-WDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPR--GGPHRACFVF 281 (390)
Q Consensus 207 ~~-W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~--~~~~~~~~~~ 281 (390)
.. |.....+.........+.+ ++++++.|+.+ ..+..|++. ....|.....+.. ...-.+++..
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~------~~~~~~~~~~~~~~h~~~v~~~~~~ 155 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGA-----RVISVCYFE------QENDWWVSKHLKRPLRSTILSLDWH 155 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESS-----SCEEECCC-----------CCCCEEECSSCCSCEEEEEEC
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecC-----CeEEEEEEC------CcccceeeeEeecccCCCeEEEEEc
Confidence 65 4433322222222222222 45666666653 345666652 2222333322221 1111122222
Q ss_pred -CCEEEEEcCCCC
Q 016413 282 -NDRLFVVGGQEG 293 (390)
Q Consensus 282 -~~~iyv~GG~~~ 293 (390)
++++++.|+.++
T Consensus 156 ~~~~~l~~~~~d~ 168 (377)
T 3dwl_C 156 PNNVLLAAGCADR 168 (377)
T ss_dssp TTSSEEEEEESSS
T ss_pred CCCCEEEEEeCCC
Confidence 566777887664
No 61
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.99 E-value=0.59 Score=42.18 Aligned_cols=202 Identities=10% Similarity=0.076 Sum_probs=100.6
Q ss_pred ccccccCCCCeEECCCC-CCcC-CCceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCC-CCCCCcceEEE
Q 016413 99 FADLPAPDLEWEQMPSA-PVPR-LDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMP-KDMAHSHLGVV 175 (390)
Q Consensus 99 ~~~~~~~~~~W~~~~~~-~~~R-~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~-~~~~r~~~~~~ 175 (390)
++...-...+|+.+... +.+. ...++...++.+|++|.. ..+++-+-...+|+.+.... .| .. ...++
T Consensus 58 i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~-------g~i~~S~DgG~tW~~~~~~~~~~-~~-~~~i~ 128 (327)
T 2xbg_A 58 LMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEP-------PIMLHTTDGGQSWSQIPLDPKLP-GS-PRLIK 128 (327)
T ss_dssp EEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEET-------TEEEEESSTTSSCEECCCCTTCS-SC-EEEEE
T ss_pred EEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECC-------CeEEEECCCCCCceECccccCCC-CC-eEEEE
Confidence 44444445689998642 2222 223444456788887521 13555433467999976432 12 12 23333
Q ss_pred -EeCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEE-CCEEEEEccCCCCCCCCCcceEEeee
Q 016413 176 -SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSIAV 253 (390)
Q Consensus 176 -~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~ 253 (390)
.-++.+|+.|. ...+++-+-.-.+|+.+.... +...++++.. ++.++++|- .+ ..|...
T Consensus 129 ~~~~~~~~~~~~---------~g~v~~S~DgG~tW~~~~~~~-~~~~~~~~~~~~~~~~~~g~-~G-------~~~~S~- 189 (327)
T 2xbg_A 129 ALGNGSAEMITN---------VGAIYRTKDSGKNWQALVQEA-IGVMRNLNRSPSGEYVAVSS-RG-------SFYSTW- 189 (327)
T ss_dssp EEETTEEEEEET---------TCCEEEESSTTSSEEEEECSC-CCCEEEEEECTTSCEEEEET-TS-------SEEEEE-
T ss_pred EECCCCEEEEeC---------CccEEEEcCCCCCCEEeecCC-CcceEEEEEcCCCcEEEEEC-CC-------cEEEEe-
Confidence 35788888874 123555444467899886422 2233344433 456666552 21 122210
Q ss_pred eccccccCCeEEccCCCCCCCceeEEE-ECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEee-C-CCCCeEECC
Q 016413 254 KDGKALEKAWRTEIPIPRGGPHRACFV-FNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYML-D-DEMKWKVLP 330 (390)
Q Consensus 254 ~~~~~~~~~W~~~~~~p~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y-d-~~~~W~~~~ 330 (390)
|....+|+.+..... .....++. -++++|+.+.. + .++.. + ...+|+.+.
T Consensus 190 ---d~gG~tW~~~~~~~~-~~~~~~~~~~~g~~~~~~~~-G----------------------~~~~s~~D~G~tW~~~~ 242 (327)
T 2xbg_A 190 ---EPGQTAWEPHNRTTS-RRLHNMGFTPDGRLWMIVNG-G----------------------KIAFSDPDNSENWGELL 242 (327)
T ss_dssp ---CTTCSSCEEEECCSS-SCEEEEEECTTSCEEEEETT-T----------------------EEEEEETTEEEEECCCB
T ss_pred ---CCCCCceeECCCCCC-CccceeEECCCCCEEEEeCC-c----------------------eEEEecCCCCCeeEecc
Confidence 012578988743222 22223333 35678877642 1 15555 2 356898865
Q ss_pred CCCCCCCcceeEEEEE-CCEEEEEcC
Q 016413 331 PMPKPNSHIECAWVIV-NNSIIITGG 355 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~-~~~l~v~GG 355 (390)
..+.+......+++.. ++.+|+.|+
T Consensus 243 ~~~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 243 SPLRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp CTTSSCCSCEEEEEESSSSCEEEEES
T ss_pred CCcccCCcceEEEEecCCCEEEEEeC
Confidence 3211111111222222 577888876
No 62
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.86 E-value=0.71 Score=41.24 Aligned_cols=71 Identities=7% Similarity=-0.051 Sum_probs=38.9
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCCC
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK 208 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 208 (390)
++||+.............++++|+.+.+-...-+... .-...+....++.+|+.+.. ...+.++|+.+.+
T Consensus 53 ~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~v~~~~--------~~~v~~~d~~~~~ 122 (353)
T 3vgz_A 53 NALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL--KPFGATINNTTQTLWFGNTV--------NSAVTAIDAKTGE 122 (353)
T ss_dssp TEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS--CCCSEEEETTTTEEEEEETT--------TTEEEEEETTTCC
T ss_pred CEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC--CcceEEECCCCCEEEEEecC--------CCEEEEEeCCCCe
Confidence 4787765332111113579999998876443322222 11122222234568887642 3578999998876
Q ss_pred e
Q 016413 209 W 209 (390)
Q Consensus 209 W 209 (390)
-
T Consensus 123 ~ 123 (353)
T 3vgz_A 123 V 123 (353)
T ss_dssp E
T ss_pred e
Confidence 4
No 63
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.85 E-value=0.033 Score=49.92 Aligned_cols=22 Identities=14% Similarity=0.148 Sum_probs=15.4
Q ss_pred CCEEEEEcCCCCCCCcceeeEEeeeEEEeecCcc
Q 016413 347 NNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSL 380 (390)
Q Consensus 347 ~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 380 (390)
+++.++.|+.++. |.+||+++.
T Consensus 317 dg~~l~sgs~Dg~------------v~iW~~~tG 338 (340)
T 4aow_A 317 DGQTLFAGYTDNL------------VRVWQVTIG 338 (340)
T ss_dssp TSSEEEEEETTSC------------EEEEEEEC-
T ss_pred CCCEEEEEeCCCE------------EEEEeCCCc
Confidence 6778888887644 778887764
No 64
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.79 E-value=0.16 Score=45.40 Aligned_cols=69 Identities=13% Similarity=0.200 Sum_probs=38.7
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-C--CEEEEEeceeCCCCCCCCceEEEEECC
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-G--RYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (390)
+.+++.|+.++ .+.++|+.+.+|..+..+... ...-.+++.. + +.+++.|+.++ .+..||..
T Consensus 71 ~~~l~s~s~D~------~v~iWd~~~~~~~~~~~~~~h-~~~V~~v~~~p~~~g~~lasgs~D~--------~i~lwd~~ 135 (316)
T 3bg1_A 71 GNILASCSYDR------KVIIWREENGTWEKSHEHAGH-DSSVNSVCWAPHDYGLILACGSSDG--------AISLLTYT 135 (316)
T ss_dssp SSCEEEEETTS------CEEEECCSSSCCCEEEEECCC-SSCCCEEEECCTTTCSCEEEECSSS--------CEEEEEEC
T ss_pred CCEEEEEECCC------EEEEEECCCCcceEEEEccCC-CCceEEEEECCCCCCcEEEEEcCCC--------CEEEEecC
Confidence 56777887763 488889988777654333221 1112233332 2 56777776543 35667766
Q ss_pred CC-CeEeC
Q 016413 206 TR-KWDSI 212 (390)
Q Consensus 206 ~~-~W~~~ 212 (390)
+. .|...
T Consensus 136 ~~~~~~~~ 143 (316)
T 3bg1_A 136 GEGQWEVK 143 (316)
T ss_dssp SSSCEEEC
T ss_pred CCCCccee
Confidence 54 47543
No 65
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.73 E-value=0.62 Score=39.99 Aligned_cols=173 Identities=15% Similarity=0.096 Sum_probs=79.6
Q ss_pred ccEEEE-ecCCCCCCCccccceeeeeccCCCceEeecCCCCCccccccceEEEecCCCchhHHHhhhcccccccCCCCeE
Q 016413 32 ADFMWA-SSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWE 110 (390)
Q Consensus 32 ~~~l~~-~GG~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 110 (390)
++.||+ .... .+ .+.+||+.+.....++.... ....++++-.+...-.... +..++.+|+......
T Consensus 34 ~g~l~v~~~~~-~~-------~i~~~~~~~~~~~~~~~~~~----~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 34 AGNVYVTSEGM-YG-------RVVKLATGSTGTTVLPFNGL----YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT 100 (270)
T ss_dssp TCCEEEEECSS-SC-------EEEEECC-----EECCCCSC----CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE
T ss_pred CCCEEEEccCC-CC-------cEEEecCCCcccceEeeCCc----CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe
Confidence 467887 4333 23 56778876665444332110 1123333322211111111 346778887766544
Q ss_pred ECCCCCCcCCCceEEEE-CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-CCEEEEEecee
Q 016413 111 QMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQY 188 (390)
Q Consensus 111 ~~~~~~~~R~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~~~iyv~GG~~ 188 (390)
.+..... ..-.+++.. +++||+....+ ..+.++|..+........... ..-.+++.. +++||+....
T Consensus 101 ~~~~~~~-~~p~~i~~~~~g~l~v~~~~~------~~i~~~~~~~~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~~- 169 (270)
T 1rwi_B 101 VLPFDGL-NYPEGLAVDTQGAVYVADRGN------NRVVKLAAGSKTQTVLPFTGL---NDPDGVAVDNSGNVYVTDTD- 169 (270)
T ss_dssp ECCCCSC-SSEEEEEECTTCCEEEEEGGG------TEEEEECTTCCSCEECCCCSC---CSCCCEEECTTCCEEEEEGG-
T ss_pred eeecCCc-CCCcceEECCCCCEEEEECCC------CEEEEEECCCceeEeeccccC---CCceeEEEeCCCCEEEEECC-
Confidence 4322111 111233332 56788875432 358888876665443321111 112234443 5779987532
Q ss_pred CCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEE-CCEEEEEcc
Q 016413 189 GPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGG 236 (390)
Q Consensus 189 ~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG 236 (390)
...+.+||+.+..-........ ..-..++.. ++.||+...
T Consensus 170 -------~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~ 210 (270)
T 1rwi_B 170 -------NNRVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEH 210 (270)
T ss_dssp -------GTEEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEET
T ss_pred -------CCEEEEEecCCCceEeecccCC-CCceEEEECCCCCEEEEEC
Confidence 3568899988765443321111 111233333 458888754
No 66
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.73 E-value=0.68 Score=40.75 Aligned_cols=64 Identities=11% Similarity=0.137 Sum_probs=36.2
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeC---CEEEEEeceeCCCCCCCCceEEEEECC
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDG---RYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~---~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (390)
+.+++.|+.++ .+.++|+.+.+|..+..+... ...-.+++... +.+++.|+.+ ..+..||..
T Consensus 67 g~~l~s~s~D~------~v~iWd~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~g~~l~s~s~d--------~~v~~wd~~ 131 (297)
T 2pm7_B 67 GTILASCSYDG------KVMIWKEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPMLLVASSD--------GKVSVVEFK 131 (297)
T ss_dssp CSEEEEEETTT------EEEEEEBSSSCBCCCEEECCC-SSCEEEEEECCGGGCSEEEEEETT--------SEEEEEEBC
T ss_pred CCEEEEEcCCC------EEEEEEcCCCceEEEEEeecC-CCceeEEEeCcCCCCcEEEEEECC--------CcEEEEEec
Confidence 56788888763 488889888877655433321 11122233321 4566666643 346667765
Q ss_pred CC
Q 016413 206 TR 207 (390)
Q Consensus 206 ~~ 207 (390)
+.
T Consensus 132 ~~ 133 (297)
T 2pm7_B 132 EN 133 (297)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 67
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.72 E-value=0.17 Score=45.60 Aligned_cols=101 Identities=7% Similarity=0.000 Sum_probs=47.5
Q ss_pred cccccccCCCCeEECCCCCCcC-CCceEEEE-CC-EEEEEecCCCCCCCCCeEEEEeCC-CCceeecCCCCC----CCCC
Q 016413 98 TFADLPAPDLEWEQMPSAPVPR-LDGAAIQI-KN-LFYVFAGYGSLDYVHSHVDVYNFT-DNKWVDRFDMPK----DMAH 169 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R-~~~~~~~~-~~-~lyv~GG~~~~~~~~~~v~~yd~~-~~~W~~~~~l~~----~~~r 169 (390)
.++.++....+++.+..+.... .-..++.. ++ .||+.+..+ ..+.+||+. +.+...+..+.. |..|
T Consensus 64 ~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~------~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~ 137 (347)
T 3hfq_A 64 GIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK------GTAEVMKIAADGALTLTDTVQHSGHGPRPE 137 (347)
T ss_dssp EEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTT------TEEEEEEECTTSCEEEEEEEECCCCCSSTT
T ss_pred eEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC------CEEEEEEeCCCCCeeecceeecCCCCCCcc
Confidence 5777777666665554322111 11223333 34 576665322 346777764 233333221111 1001
Q ss_pred ----cceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECC-CCCeEeC
Q 016413 170 ----SHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSE-TRKWDSI 212 (390)
Q Consensus 170 ----~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~-~~~W~~~ 212 (390)
.-+.++. -++++|+.+.. .+.+.+||+. +.+...+
T Consensus 138 ~~~~~~~~~~~spdg~l~v~~~~--------~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 138 QDGSHIHYTDLTPDNRLAVIDLG--------SDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp CSSCCEEEEEECTTSCEEEEETT--------TTEEEEEEECTTSCEEEE
T ss_pred ccCCCceEEEECCCCcEEEEeCC--------CCEEEEEEECCCCcEEEe
Confidence 1223333 35667776531 3568888887 4555543
No 68
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.72 E-value=0.18 Score=44.87 Aligned_cols=130 Identities=9% Similarity=-0.001 Sum_probs=62.0
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEE--CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEE
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV 175 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~ 175 (390)
.+..+|..+.+......+.........+.+ +++.++.|+.++ .+.+||+.+.+-...-.... ..-.+++
T Consensus 120 ~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg------~v~~~d~~~~~~~~~~~~~~---~~i~~~~ 190 (337)
T 1gxr_A 120 TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG------NIAVWDLHNQTLVRQFQGHT---DGASCID 190 (337)
T ss_dssp EEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCCS---SCEEEEE
T ss_pred cEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC------cEEEEeCCCCceeeeeeccc---CceEEEE
Confidence 566667666553332222211111122222 556777777653 48899998776443211111 1122333
Q ss_pred Ee-CCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEE-ECCEEEEEccCCCCCCCCCcceEEe
Q 016413 176 SD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQL-WRGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 176 ~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
.. ++..++.|+. ...+..||+.+.+-...-..+. .-.+++. -+++++++|+.+ ..+..|++
T Consensus 191 ~~~~~~~l~~~~~--------dg~i~~~d~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~~-----~~i~~~~~ 253 (337)
T 1gxr_A 191 ISNDGTKLWTGGL--------DNTVRSWDLREGRQLQQHDFTS--QIFSLGYCPTGEWLAVGMES-----SNVEVLHV 253 (337)
T ss_dssp ECTTSSEEEEEET--------TSEEEEEETTTTEEEEEEECSS--CEEEEEECTTSSEEEEEETT-----SCEEEEET
T ss_pred ECCCCCEEEEEec--------CCcEEEEECCCCceEeeecCCC--ceEEEEECCCCCEEEEEcCC-----CcEEEEEC
Confidence 32 5666666653 3458889987764322211111 1122222 255666666643 34666664
No 69
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.72 E-value=0.41 Score=44.05 Aligned_cols=106 Identities=10% Similarity=0.119 Sum_probs=52.9
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCC---CCcceEEEEe-C-CEEEEEeceeCCCCCCCCceEEEEE
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM---AHSHLGVVSD-G-RYIYIVSGQYGPQCRGPTSRTFVLD 203 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~---~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~v~~yd 203 (390)
+.+++.|+.++ .+.+||+.+.+-...-....+. ...-.+++.. + ..+++.|+.++. ...+.+||
T Consensus 178 ~~~l~~~~~dg------~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-----~~~i~~~d 246 (416)
T 2pm9_A 178 AHVFASAGSSN------FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN-----DPSILIWD 246 (416)
T ss_dssp TTEEEEESSSS------CEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS-----SCCCCEEE
T ss_pred CcEEEEEcCCC------CEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC-----CceEEEEe
Confidence 56888887653 4889999887654332222100 1112233333 2 357777765431 12577888
Q ss_pred CCCCCeEeCCCCC-CCCCCceEEEE---CCEEEEEccCCCCCCCCCcceEEe
Q 016413 204 SETRKWDSIPPLP-SPRYSPATQLW---RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 204 ~~~~~W~~~~~~p-~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
..+.. ..+..+. ........+.+ ++.+++.|+.+ ..+..|++
T Consensus 247 ~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d-----g~v~~wd~ 292 (416)
T 2pm9_A 247 LRNAN-TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD-----NTVLLWNP 292 (416)
T ss_dssp TTSTT-SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS-----SEEEEECS
T ss_pred CCCCC-CCcEEeecCccCceeEEEeCCCCCCeEEEEeCC-----CCEEEeeC
Confidence 87642 1111222 11111222222 56777777654 34666664
No 70
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.67 E-value=0.66 Score=41.76 Aligned_cols=99 Identities=5% Similarity=0.094 Sum_probs=50.1
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
+++ ++.|+.++ .+..||+.+.+-... +... ...-.+++. -++.+++.|+.+ ..+..||..+
T Consensus 154 ~~~-l~s~s~d~------~i~~wd~~~~~~~~~--~~~h-~~~v~~~~~~~~~~~l~sg~~d--------~~v~~wd~~~ 215 (340)
T 1got_B 154 DNQ-IVTSSGDT------TCALWDIETGQQTTT--FTGH-TGDVMSLSLAPDTRLFVSGACD--------ASAKLWDVRE 215 (340)
T ss_dssp TTE-EEEEETTS------CEEEEETTTTEEEEE--ECCC-SSCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCc-EEEEECCC------cEEEEECCCCcEEEE--EcCC-CCceEEEEECCCCCEEEEEeCC--------CcEEEEECCC
Confidence 455 55565543 488899887764322 2111 111223333 356677777753 3477888876
Q ss_pred CCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEe
Q 016413 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
..-... +.........+.+ ++.+++.|+.+ ..+..|++
T Consensus 216 ~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~d-----~~v~iwd~ 255 (340)
T 1got_B 216 GMCRQT--FTGHESDINAICFFPNGNAFATGSDD-----ATCRLFDL 255 (340)
T ss_dssp CSEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEET
T ss_pred CeeEEE--EcCCcCCEEEEEEcCCCCEEEEEcCC-----CcEEEEEC
Confidence 543221 1111111112222 56677777654 35777775
No 71
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.66 E-value=0.21 Score=46.85 Aligned_cols=201 Identities=10% Similarity=0.056 Sum_probs=100.1
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-CC-EEEEEeceeCCCCCCCCceEEEEECC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GR-YIYIVSGQYGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (390)
+++.+++++.+.. ...++++|+.+.+...+...+. ...+.+.. ++ +|++.+..++ ...++.+|+.
T Consensus 189 dg~~la~~s~~~~---~~~i~~~d~~tg~~~~l~~~~~----~~~~~~~spdg~~la~~~~~~g------~~~i~~~d~~ 255 (415)
T 2hqs_A 189 DGSKLAYVTFESG---RSALVIQTLANGAVRQVASFPR----HNGAPAFSPDGSKLAFALSKTG------SLNLYVMDLA 255 (415)
T ss_dssp TSSEEEEEECTTS---SCEEEEEETTTCCEEEEECCSS----CEEEEEECTTSSEEEEEECTTS------SCEEEEEETT
T ss_pred CCCEEEEEEecCC---CcEEEEEECCCCcEEEeecCCC----cccCEEEcCCCCEEEEEEecCC------CceEEEEECC
Confidence 5566666665432 2469999999888766544332 12233332 44 4554543222 4579999999
Q ss_pred CCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeEE-EEC
Q 016413 206 TRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACF-VFN 282 (390)
Q Consensus 206 ~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~-~~~ 282 (390)
+.+...+...+. ....... +++.+++++.... ...+..|+ ..+.+-..+... .......+ .-+
T Consensus 256 ~~~~~~l~~~~~---~~~~~~~spdg~~l~~~s~~~g--~~~i~~~d-------~~~~~~~~l~~~--~~~~~~~~~spd 321 (415)
T 2hqs_A 256 SGQIRQVTDGRS---NNTEPTWFPDSQNLAFTSDQAG--RPQVYKVN-------INGGAPQRITWE--GSQNQDADVSSD 321 (415)
T ss_dssp TCCEEECCCCSS---CEEEEEECTTSSEEEEEECTTS--SCEEEEEE-------TTSSCCEECCCS--SSEEEEEEECTT
T ss_pred CCCEEeCcCCCC---cccceEECCCCCEEEEEECCCC--CcEEEEEE-------CCCCCEEEEecC--CCcccCeEECCC
Confidence 887776654321 1112222 4444444432111 12333334 234443332211 11111122 225
Q ss_pred CEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCCCCCCcceeEEEEECCEEEEEcCCCCCCC
Q 016413 283 DRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHIECAWVIVNNSIIITGGTTEKHP 361 (390)
Q Consensus 283 ~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~ 361 (390)
++.+++++.... ...++++| .+.+...+.... .........+++.+++++.+...
T Consensus 322 G~~l~~~~~~~g-------------------~~~i~~~d~~~~~~~~l~~~~----~~~~~~~spdg~~l~~~s~~~~~- 377 (415)
T 2hqs_A 322 GKFMVMVSSNGG-------------------QQHIAKQDLATGGVQVLSSTF----LDETPSLAPNGTMVIYSSSQGMG- 377 (415)
T ss_dssp SSEEEEEEECSS-------------------CEEEEEEETTTCCEEECCCSS----SCEEEEECTTSSEEEEEEEETTE-
T ss_pred CCEEEEEECcCC-------------------ceEEEEEECCCCCEEEecCCC----CcCCeEEcCCCCEEEEEEcCCCc-
Confidence 555555543211 12488998 666666654322 11111233467777776654331
Q ss_pred cceeeEEeeeEEEeecCccceeeccC
Q 016413 362 MTKRMILVGEVFQFHLDSLVIIYHYR 387 (390)
Q Consensus 362 ~~~~~~~~~~v~~yd~~~~~W~~v~~ 387 (390)
..++.+|+.......+..
T Consensus 378 --------~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 378 --------SVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp --------EEEEEEETTSCCEEECCC
T ss_pred --------cEEEEEECCCCcEEEeeC
Confidence 258999988777666543
No 72
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.64 E-value=0.24 Score=43.29 Aligned_cols=98 Identities=16% Similarity=0.103 Sum_probs=62.4
Q ss_pred cceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceE
Q 016413 170 SHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHW 249 (390)
Q Consensus 170 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 249 (390)
+..++...++.||+..|.++ .+.++|+++.+=..-- ++..-++..++..+++||+....+ ..+.+|
T Consensus 56 ftqGL~~~~~~Ly~stG~~g--------~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~-----~~v~V~ 121 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQG--------TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE-----GLLFTW 121 (268)
T ss_dssp CEEEEEEETTEEEEEETTTT--------EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS-----CEEEEE
T ss_pred ccceEEEECCEEEEEcCCCC--------EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC-----CEEEEE
Confidence 44567778999999988532 3888999887642222 444334455778899999996532 345556
Q ss_pred EeeeeccccccCCeEEccCCCCCCCceeEEEECCEEEEEcC
Q 016413 250 SIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGG 290 (390)
Q Consensus 250 ~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG 290 (390)
| +++ .+.+..++.+..+.+++.-+++||+.-|
T Consensus 122 D-------~~T--l~~~~ti~~~~eGwGLt~Dg~~L~vSdG 153 (268)
T 3nok_A 122 S-------GMP--PQRERTTRYSGEGWGLCYWNGKLVRSDG 153 (268)
T ss_dssp E-------TTT--TEEEEEEECSSCCCCEEEETTEEEEECS
T ss_pred E-------CCc--CcEEEEEeCCCceeEEecCCCEEEEECC
Confidence 5 333 3333333333334577777888999876
No 73
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.63 E-value=1.2 Score=41.70 Aligned_cols=177 Identities=10% Similarity=0.079 Sum_probs=88.1
Q ss_pred EECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEEC
Q 016413 126 QIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (390)
Q Consensus 126 ~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (390)
..++.+++.|+.++ .+.+||+.+.+-... +... ...-.+++. .++..++.|+.+ ..+..||.
T Consensus 277 ~~~~~~l~~~~~d~------~i~vwd~~~~~~~~~--~~~~-~~~v~~~~~~~~~~~l~sg~~d--------g~i~vwd~ 339 (464)
T 3v7d_B 277 SGHGNIVVSGSYDN------TLIVWDVAQMKCLYI--LSGH-TDRIYSTIYDHERKRCISASMD--------TTIRIWDL 339 (464)
T ss_dssp EEETTEEEEEETTS------CEEEEETTTTEEEEE--ECCC-SSCEEEEEEETTTTEEEEEETT--------SCEEEEET
T ss_pred cCCCCEEEEEeCCC------eEEEEECCCCcEEEE--ecCC-CCCEEEEEEcCCCCEEEEEeCC--------CcEEEEEC
Confidence 34556677777663 488899877654322 2111 111223333 355566677643 34788998
Q ss_pred CCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeEEEECCE
Q 016413 205 ETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDR 284 (390)
Q Consensus 205 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~ 284 (390)
.+.+- +..+.........+..++..++.|+.+ ..+..|++ .+..-...... .......+...+++
T Consensus 340 ~~~~~--~~~~~~h~~~v~~~~~~~~~l~s~s~d-----g~v~vwd~-------~~~~~~~~~~~-~~~~~~~~~~~~~~ 404 (464)
T 3v7d_B 340 ENGEL--MYTLQGHTALVGLLRLSDKFLVSAAAD-----GSIRGWDA-------NDYSRKFSYHH-TNLSAITTFYVSDN 404 (464)
T ss_dssp TTTEE--EEEECCCSSCEEEEEECSSEEEEEETT-----SEEEEEET-------TTCCEEEEEEC-TTCCCEEEEEECSS
T ss_pred CCCcE--EEEEeCCCCcEEEEEEcCCEEEEEeCC-----CcEEEEEC-------CCCceeeeecC-CCCccEEEEEeCCC
Confidence 76542 222222223334445567777777654 35677774 22221111111 11222345566778
Q ss_pred EEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCCCCCCcceeEEEEECCEEEEEcCCCCC
Q 016413 285 LFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHIECAWVIVNNSIIITGGTTEK 359 (390)
Q Consensus 285 iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~ 359 (390)
+++.|+ ++ .+.+|| .+.+-......+. .. .-.++...++.+++.++.++.
T Consensus 405 ~l~~~~-dg----------------------~i~iwd~~~g~~~~~~~~~~-~~-~v~~v~~~~~~l~~~~~~~g~ 455 (464)
T 3v7d_B 405 ILVSGS-EN----------------------QFNIYNLRSGKLVHANILKD-AD-QIWSVNFKGKTLVAAVEKDGQ 455 (464)
T ss_dssp EEEEEE-TT----------------------EEEEEETTTCCEEESCTTTT-CS-EEEEEEEETTEEEEEEEETTE
T ss_pred EEEEec-CC----------------------eEEEEECCCCcEEehhhccC-CC-cEEEEEecCCEEEEEEEeCCe
Confidence 777777 32 388888 6554333211222 12 122334446666666665443
No 74
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=95.57 E-value=0.55 Score=44.57 Aligned_cols=59 Identities=12% Similarity=0.197 Sum_probs=37.2
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (390)
++++|+|-| +..|+||..+++.... .-+. .+.. -++....+++|+|-| +..++||+.+.
T Consensus 158 ~~~~yfFkG--------~~yw~yd~~~~~~~~~-~w~g-i~~i-DAA~~~~g~~YfFkG----------~~y~rfd~~~~ 216 (460)
T 1qhu_A 158 DEGILFFQG--------NRKWFWDLTTGTKKER-SWPA-VGNC-TSALRWLGRYYCFQG----------NQFLRFNPVSG 216 (460)
T ss_dssp SSEEEEEET--------TEEEEEETTTTEEEEE-CCTT-SCCC-SEEEEETTEEEEEET----------TEEEEECTTTC
T ss_pred CCeEEEEec--------ccEEEEecccceeecc-cCCC-CCcc-chheeeCCceEEEEC----------CEEEEEcCccC
Confidence 678898876 3489999988765431 1111 1122 234445789999976 45677877553
No 75
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.57 E-value=0.1 Score=46.47 Aligned_cols=102 Identities=8% Similarity=0.099 Sum_probs=51.8
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
+++.++.|+.+ ..+.+||+.+.+......+.... ..-.+++. -++..++.|+.+ ..+..||..+
T Consensus 108 ~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d--------g~v~~~d~~~ 172 (337)
T 1gxr_A 108 DGCTLIVGGEA------STLSIWDLAAPTPRIKAELTSSA-PACYALAISPDSKVCFSCCSD--------GNIAVWDLHN 172 (337)
T ss_dssp TSSEEEEEESS------SEEEEEECCCC--EEEEEEECSS-SCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEcCC------CcEEEEECCCCCcceeeecccCC-CceEEEEECCCCCEEEEEeCC--------CcEEEEeCCC
Confidence 45677777655 35889999888754443332211 11223333 255666676543 3478899887
Q ss_pred CCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEe
Q 016413 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
.+.... +.........+.+ ++..++.++.+ ..+..|++
T Consensus 173 ~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~ 212 (337)
T 1gxr_A 173 QTLVRQ--FQGHTDGASCIDISNDGTKLWTGGLD-----NTVRSWDL 212 (337)
T ss_dssp TEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEET
T ss_pred Cceeee--eecccCceEEEEECCCCCEEEEEecC-----CcEEEEEC
Confidence 653322 1111111222222 55566666643 34666664
No 76
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.41 E-value=0.31 Score=45.02 Aligned_cols=64 Identities=3% Similarity=-0.055 Sum_probs=34.4
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-CCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
++++++.|+.++ .+.+||+.+.+-. ..+... ...-.+++.. ++..++.|+.+ ..+..||..+
T Consensus 150 ~~~~l~s~s~d~------~i~iwd~~~~~~~--~~~~~h-~~~v~~~~~~~~~~~l~s~~~d--------~~v~iwd~~~ 212 (420)
T 3vl1_A 150 SGEALISSSQDM------QLKIWSVKDGSNP--RTLIGH-RATVTDIAIIDRGRNVLSASLD--------GTIRLWECGT 212 (420)
T ss_dssp TSSEEEEEETTS------EEEEEETTTCCCC--EEEECC-SSCEEEEEEETTTTEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEeCCC------eEEEEeCCCCcCc--eEEcCC-CCcEEEEEEcCCCCEEEEEcCC--------CcEEEeECCC
Confidence 566777777663 5888998765421 111110 1112223332 55666677643 3477788876
Q ss_pred CC
Q 016413 207 RK 208 (390)
Q Consensus 207 ~~ 208 (390)
.+
T Consensus 213 ~~ 214 (420)
T 3vl1_A 213 GT 214 (420)
T ss_dssp TE
T ss_pred Cc
Confidence 54
No 77
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.35 E-value=0.97 Score=41.42 Aligned_cols=106 Identities=8% Similarity=0.147 Sum_probs=52.9
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCc------ee-ecCCCCCCCCCcceEEEEe-C-CEEEEEeceeCCCCCCCCceE
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNK------WV-DRFDMPKDMAHSHLGVVSD-G-RYIYIVSGQYGPQCRGPTSRT 199 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~------W~-~~~~l~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~v 199 (390)
+.+++.|+.++ .+.+||+.+.+ -. .+...... ...-.+++.. + +.+++.|+.+ ..+
T Consensus 126 ~~~l~s~~~dg------~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d--------g~v 190 (416)
T 2pm9_A 126 DNVLASGGNNG------EIFIWDMNKCTESPSNYTPLTPGQSMSS-VDEVISLAWNQSLAHVFASAGSS--------NFA 190 (416)
T ss_dssp TTBEEEECSSS------CEEBCBTTTTSSCTTTCCCBCCCCSCCS-SCCCCEEEECSSCTTEEEEESSS--------SCE
T ss_pred CCEEEEEcCCC------eEEEEECCCCccccccccccccccccCC-CCCeeEEEeCCCCCcEEEEEcCC--------CCE
Confidence 67788887663 48888887765 11 11111111 1122233333 2 5677777643 348
Q ss_pred EEEECCCCCeEeCCCCCCC----CCC-ceEEEE-C-CEEEEEccCCCCCCCCCcceEEe
Q 016413 200 FVLDSETRKWDSIPPLPSP----RYS-PATQLW-R-GRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 200 ~~yd~~~~~W~~~~~~p~~----r~~-~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
.+||..+.+-...-..... ... .+++.. + ..+++.|+.++. ...+..|++
T Consensus 191 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~ 247 (416)
T 2pm9_A 191 SIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWDL 247 (416)
T ss_dssp EEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEET
T ss_pred EEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEeC
Confidence 8899887654332222211 111 222222 2 356777665421 125777775
No 78
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.26 E-value=0.47 Score=43.55 Aligned_cols=26 Identities=4% Similarity=0.026 Sum_probs=16.9
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceee
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD 159 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~ 159 (390)
+++.++.|+.++ .+..||+.+.+-..
T Consensus 160 ~~~~l~~~~~d~------~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 160 DGTHIISMDVEN------VTILWNVISGTVMQ 185 (425)
T ss_dssp TSSEEEEEETTC------CEEEEETTTTEEEE
T ss_pred CCCEEEEEecCC------eEEEEECCCCcEEE
Confidence 456666676553 47888987776543
No 79
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.20 E-value=0.84 Score=42.24 Aligned_cols=95 Identities=13% Similarity=0.114 Sum_probs=51.3
Q ss_pred CCeEECCCCCCcCCCceEEEE---CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCC---CCCCCC-------cceE
Q 016413 107 LEWEQMPSAPVPRLDGAAIQI---KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDM---PKDMAH-------SHLG 173 (390)
Q Consensus 107 ~~W~~~~~~~~~R~~~~~~~~---~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l---~~~~~r-------~~~~ 173 (390)
.+|+.+.+......-++++.- .+.||+.+...... .-+++.+-...+|+.+... +....+ .-.+
T Consensus 43 ~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g---~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~ 119 (394)
T 3b7f_A 43 RTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLG---PTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFW 119 (394)
T ss_dssp CSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CC---EEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEE
T ss_pred CCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCC---ccEEEeCCCCCCceECCccccCCCcccccccccccceeE
Confidence 689876321111112333332 45788765432111 2478887788899987532 211111 1123
Q ss_pred EEEe----CCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCC
Q 016413 174 VVSD----GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP 213 (390)
Q Consensus 174 ~~~~----~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 213 (390)
++.. .+.||+.+- ...+++.+-...+|+.+.
T Consensus 120 l~~~~~~~~~~l~~g~~---------~ggl~~S~DgG~tW~~~~ 154 (394)
T 3b7f_A 120 LTPGHASEPGTWYAGTS---------PQGLFRSTDHGASWEPVA 154 (394)
T ss_dssp EEECCTTSTTCEEEEEE---------TTEEEEESSTTSBCEECH
T ss_pred EEeCCCCCCCEEEEEec---------CCcEEEEcCCCCCeEECc
Confidence 3443 577887642 245788888888999885
No 80
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.19 E-value=0.13 Score=44.68 Aligned_cols=145 Identities=7% Similarity=-0.095 Sum_probs=72.6
Q ss_pred ceeeeeccCCCceEeecCCCCCccccccceEEEecCCCchhHHHhhhcccccccCC-CCeEECCCCCCcCCCceE-EEEC
Q 016413 51 SVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPD-LEWEQMPSAPVPRLDGAA-IQIK 128 (390)
Q Consensus 51 ~~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~W~~~~~~~~~R~~~~~-~~~~ 128 (390)
..+..+|+.+.....+...... -.+++...+...-.. .....++.+|..+ .+...+...+....-..+ ..-+
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~~~-----v~~~~~spdg~~l~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTPEL-----FEAPNWSPDGKYLLL-NSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD 95 (297)
T ss_dssp EEEEEEETTTTEEEEEEEESSC-----CEEEEECTTSSEEEE-EETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred eeEEEEeCCCCceeeeccCCcc-----eEeeEECCCCCEEEE-EcCCeEEEEeCCCCCCceEeccccccccccceEECCC
Confidence 4788888888776654432211 111121111100000 0123677888877 666665543321221222 2235
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-C-CEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-G-RYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
++.+++++.+... ...++.+|..+..-..+.... . ...++.. + ..|++.++.++ ...++.+|..+
T Consensus 96 g~~l~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~----~-~~~~~~spdg~~l~~~~~~~~------~~~l~~~~~~~ 162 (297)
T 2ojh_A 96 GALYAISDKVEFG--KSAIYLLPSTGGTPRLMTKNL----P-SYWHGWSPDGKSFTYCGIRDQ------VFDIYSMDIDS 162 (297)
T ss_dssp SSEEEEEECTTTS--SCEEEEEETTCCCCEECCSSS----S-EEEEEECTTSSEEEEEEEETT------EEEEEEEETTT
T ss_pred CCEEEEEEeCCCC--cceEEEEECCCCceEEeecCC----C-ccceEECCCCCEEEEEECCCC------ceEEEEEECCC
Confidence 6666666543322 356999998877755543322 1 2222332 3 44555554322 34678888887
Q ss_pred CCeEeCCC
Q 016413 207 RKWDSIPP 214 (390)
Q Consensus 207 ~~W~~~~~ 214 (390)
.....+..
T Consensus 163 ~~~~~~~~ 170 (297)
T 2ojh_A 163 GVETRLTH 170 (297)
T ss_dssp CCEEECCC
T ss_pred CcceEccc
Confidence 77766654
No 81
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.16 E-value=2 Score=39.69 Aligned_cols=100 Identities=11% Similarity=0.127 Sum_probs=56.5
Q ss_pred cccccccCCCCeEECCCC---CCc--C----C-Cc--eEEEE----CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecC
Q 016413 98 TFADLPAPDLEWEQMPSA---PVP--R----L-DG--AAIQI----KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF 161 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~---~~~--R----~-~~--~~~~~----~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~ 161 (390)
.+++.+....+|+.+... +.. + . .. +++.- .+.||+.+- . .-+++.+-...+|+.+.
T Consensus 82 gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-~------ggl~~S~DgG~tW~~~~ 154 (394)
T 3b7f_A 82 TVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-P------QGLFRSTDHGASWEPVA 154 (394)
T ss_dssp EEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE-T------TEEEEESSTTSBCEECH
T ss_pred cEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec-C------CcEEEEcCCCCCeEECc
Confidence 466666667899988642 211 1 1 11 22222 456777542 1 24888888889999875
Q ss_pred CC---CC------------CCCCcceEEEEe---CCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCC
Q 016413 162 DM---PK------------DMAHSHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP 213 (390)
Q Consensus 162 ~l---~~------------~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 213 (390)
.+ |. +.....+++++. .+.||+... ...+++.+-...+|+.+.
T Consensus 155 ~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~---------~ggl~~s~DgG~tW~~~~ 215 (394)
T 3b7f_A 155 GFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS---------SGGVFESTDAGTDWKPLN 215 (394)
T ss_dssp HHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE---------TBEEEEESSTTSSCEECC
T ss_pred CccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC---------CCCEEEECCCCCCceECC
Confidence 32 21 001122344443 356777543 134777877788999885
No 82
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.16 E-value=3 Score=41.79 Aligned_cols=99 Identities=18% Similarity=0.315 Sum_probs=58.9
Q ss_pred ceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCc--eeecCCCCCCC------CCcceEEEEeCCEEEEEeceeCCCCC
Q 016413 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDM------AHSHLGVVSDGRYIYIVSGQYGPQCR 193 (390)
Q Consensus 122 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~l~~~~------~r~~~~~~~~~~~iyv~GG~~~~~~~ 193 (390)
.+.++.++.||+.... ..+..+|..+.+ |+.-...+... .....+.++.+++||+...
T Consensus 71 ~~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------- 136 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASW-------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------- 136 (677)
T ss_dssp CCCEEETTEEEEECGG-------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------
T ss_pred eCCEEECCEEEEECCC-------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------
Confidence 3446779999998652 358899988764 87644322100 0112345668899988642
Q ss_pred CCCceEEEEECCCCC--eEeCCC-C-CC-CCCCceEEEECCEEEEEcc
Q 016413 194 GPTSRTFVLDSETRK--WDSIPP-L-PS-PRYSPATQLWRGRLHVMGG 236 (390)
Q Consensus 194 ~~~~~v~~yd~~~~~--W~~~~~-~-p~-~r~~~~~~~~~~~iyv~GG 236 (390)
...+..+|.++.+ |+.-.. - +. .....+.++.++.+|+..+
T Consensus 137 --dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~ 182 (677)
T 1kb0_A 137 --DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNG 182 (677)
T ss_dssp --TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCB
T ss_pred --CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEec
Confidence 3568899987654 876432 1 11 1122334567888887654
No 83
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.14 E-value=0.62 Score=41.95 Aligned_cols=102 Identities=14% Similarity=0.163 Sum_probs=49.1
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCc--eeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (390)
++..++.||.++ .+.+||+.+.. ......+..............++. ++.|+.+ ..+..||+.
T Consensus 108 ~~~~l~s~~~d~------~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d--------~~i~~wd~~ 172 (340)
T 1got_B 108 SGNYVACGGLDN------ICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGD--------TTCALWDIE 172 (340)
T ss_dssp TSSEEEEEETTC------EEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETT--------SCEEEEETT
T ss_pred CCCEEEEEeCCC------eEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECC--------CcEEEEECC
Confidence 566777788763 47888877643 111111111001111122234565 4455432 347788987
Q ss_pred CCCeEeCCCCCCCCCC-ceEEEE-CCEEEEEccCCCCCCCCCcceEEe
Q 016413 206 TRKWDSIPPLPSPRYS-PATQLW-RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 206 ~~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
+..-.. .+...... .+++.. ++.+++.|+.+ ..+..|++
T Consensus 173 ~~~~~~--~~~~h~~~v~~~~~~~~~~~l~sg~~d-----~~v~~wd~ 213 (340)
T 1got_B 173 TGQQTT--TFTGHTGDVMSLSLAPDTRLFVSGACD-----ASAKLWDV 213 (340)
T ss_dssp TTEEEE--EECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEET
T ss_pred CCcEEE--EEcCCCCceEEEEECCCCCEEEEEeCC-----CcEEEEEC
Confidence 764322 11111111 122222 56677777764 35777874
No 84
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.13 E-value=0.76 Score=46.95 Aligned_cols=205 Identities=8% Similarity=-0.002 Sum_probs=96.7
Q ss_pred eeeeeccCCCceEeecCCCCCcc-cc-ccceEEEec-CCCc-hhHHHhhhcccccccCCCCeEECCCCCCcCCCceE--E
Q 016413 52 VASNWALEKSGVVVIPHVNATKI-DR-QRESVAVID-KKGQ-DAERFLSATFADLPAPDLEWEQMPSAPVPRLDGAA--I 125 (390)
Q Consensus 52 ~~~~~d~~~~~W~~l~~~~~~p~-~r-~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~W~~~~~~~~~R~~~~~--~ 125 (390)
-+.+||+.++++.........+. .. ...-.++.. ..+. ---.....-++.+|+.+.+++.............+ .
T Consensus 378 Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i 457 (795)
T 4a2l_A 378 GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAI 457 (795)
T ss_dssp CEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEE
T ss_pred CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEE
Confidence 36778888888877654221100 00 111112221 2221 11111223678888888877766432111111111 1
Q ss_pred EE--CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCC--CCCC-CcceEEEE-eCCEEEEEeceeCCCCCCCCceE
Q 016413 126 QI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMP--KDMA-HSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRT 199 (390)
Q Consensus 126 ~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~--~~~~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v 199 (390)
.. ++.||+... . -+.+||+.+++|+...... .+.. ..-.++.. .++.|++-.. .-+
T Consensus 458 ~~d~~g~lwigt~-~-------Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~----------~Gl 519 (795)
T 4a2l_A 458 LPDGEGNLWLGTL-S-------ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE----------EGL 519 (795)
T ss_dssp EECSSSCEEEEES-S-------CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES----------SCE
T ss_pred EECCCCCEEEEec-C-------ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC----------Cce
Confidence 12 467777542 2 2899999999998875431 1111 11122222 3567877542 237
Q ss_pred EEEECCCCCeEeCCCC---C-CCC-CCceEEE-ECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEcc---CCC
Q 016413 200 FVLDSETRKWDSIPPL---P-SPR-YSPATQL-WRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEI---PIP 270 (390)
Q Consensus 200 ~~yd~~~~~W~~~~~~---p-~~r-~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~---~~p 270 (390)
.+||+.++++ ..... . .+- .-.+++. .++.|++.... .+.+|+ +.+.+++... .+|
T Consensus 520 ~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-------Gl~~~d-------~~~~~~~~~~~~~gl~ 584 (795)
T 4a2l_A 520 SVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE-------GFYCFN-------EKDKQIKRYNTTNGLP 584 (795)
T ss_dssp EEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS-------CEEEEE-------TTTTEEEEECGGGTCS
T ss_pred EEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC-------CceeEC-------CCCCcEEEeCCCCCCc
Confidence 8899888877 43211 1 111 1112222 25677775421 234444 5666666542 244
Q ss_pred CCCCceeEEEE-CCEEEEEcC
Q 016413 271 RGGPHRACFVF-NDRLFVVGG 290 (390)
Q Consensus 271 ~~~~~~~~~~~-~~~iyv~GG 290 (390)
.... .+++.- ++.|++.+.
T Consensus 585 ~~~i-~~i~~d~~g~lWi~t~ 604 (795)
T 4a2l_A 585 NNVV-YGILEDSFGRLWLSTN 604 (795)
T ss_dssp CSCE-EEEEECTTSCEEEEET
T ss_pred hhhe-EEEEECCCCCEEEEcC
Confidence 4332 223222 567887763
No 85
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.09 E-value=0.13 Score=46.52 Aligned_cols=94 Identities=6% Similarity=-0.061 Sum_probs=48.9
Q ss_pred eEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCC-CCCCceE
Q 016413 146 HVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPS-PRYSPAT 224 (390)
Q Consensus 146 ~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~r~~~~~ 224 (390)
.++.+|..+.+++.+...... ......+..-+++||+.+... ....+.+||+.+.+++.+..... ...-..+
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~-~~p~~~a~spdg~l~~~~~~~------~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~ 91 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAAT-QNPTYLALSAKDCLYSVDKED------DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYV 91 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEEC-SCCCCEEECTTCEEEEEEEET------TEEEEEEEEEETTEEEEEEEEEEESCCCSEE
T ss_pred EEEEEcCCCCeEEEeeeeecc-CCcceEEEccCCeEEEEEecC------CCceEEEEEecCCcEEEeeeeecCCCCCEEE
Confidence 477888888888764322211 111212223367788776421 13568899988777766654221 1111223
Q ss_pred EEE-CC-EEEEEccCCCCCCCCCcceEEe
Q 016413 225 QLW-RG-RLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 225 ~~~-~~-~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
+.. ++ .||+.+.. ...+..|++
T Consensus 92 a~spdg~~l~~~~~~-----~~~v~v~~~ 115 (347)
T 3hfq_A 92 AVDEARQLVYSANYH-----KGTAEVMKI 115 (347)
T ss_dssp EEETTTTEEEEEETT-----TTEEEEEEE
T ss_pred EECCCCCEEEEEeCC-----CCEEEEEEe
Confidence 322 34 57666532 234566665
No 86
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.08 E-value=0.24 Score=44.27 Aligned_cols=104 Identities=10% Similarity=0.062 Sum_probs=54.9
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe---CCEEEEEeceeCCCCCCCCceEEEEEC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (390)
+++.++.|+.++ .+.+||+.+++...+..+... ...-.+++.. ++.+++.|+.+ ..+.+||+
T Consensus 24 ~g~~lasgs~D~------~v~lwd~~~~~~~~~~~l~gH-~~~V~~v~~~~~~~~~~l~s~s~D--------~~v~iWd~ 88 (316)
T 3bg1_A 24 YGTRLATCSSDR------SVKIFDVRNGGQILIADLRGH-EGPVWQVAWAHPMYGNILASCSYD--------RKVIIWRE 88 (316)
T ss_dssp GGCEEEEEETTT------EEEEEEEETTEEEEEEEEECC-SSCEEEEEECCGGGSSCEEEEETT--------SCEEEECC
T ss_pred CCCEEEEEeCCC------eEEEEEecCCCcEEEEEEcCC-CccEEEEEeCCCCCCCEEEEEECC--------CEEEEEEC
Confidence 467778888763 477888877654333333221 1112233332 25677777654 34778888
Q ss_pred CCCCeEeCCCCCCCCCCc-eEEEE-C--CEEEEEccCCCCCCCCCcceEEe
Q 016413 205 ETRKWDSIPPLPSPRYSP-ATQLW-R--GRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 205 ~~~~W~~~~~~p~~r~~~-~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
.+..|..+..+....... +++.. + +.+++.|+.+ ..+..|++
T Consensus 89 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D-----~~i~lwd~ 134 (316)
T 3bg1_A 89 ENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD-----GAISLLTY 134 (316)
T ss_dssp SSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSS-----SCEEEEEE
T ss_pred CCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCC-----CCEEEEec
Confidence 887775543322211112 22222 2 4566666653 35667775
No 87
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.07 E-value=0.13 Score=46.31 Aligned_cols=103 Identities=6% Similarity=-0.067 Sum_probs=52.7
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCc--eeecCCCCCCCCCcceEEEE-----eCCEEEEEeceeCCCCCCCCceEE
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDMAHSHLGVVS-----DGRYIYIVSGQYGPQCRGPTSRTF 200 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~l~~~~~r~~~~~~~-----~~~~iyv~GG~~~~~~~~~~~~v~ 200 (390)
++..++.|+.++ .+.+||+.+.. ...+........+.-.+++. .++.+++.|+. ...+.
T Consensus 128 ~~~~l~~~~~d~------~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~--------d~~i~ 193 (357)
T 3i2n_A 128 GAPEIVTGSRDG------TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD--------NGDIK 193 (357)
T ss_dssp CCCEEEEEETTS------CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET--------TSEEE
T ss_pred CccEEEEEeCCC------eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc--------CCeEE
Confidence 456777777653 48888987764 33332222111122223331 35667777753 24688
Q ss_pred EEECCCCCeEeCCCCCCCCCCceEEEE----CCEEEEEccCCCCCCCCCcceEEe
Q 016413 201 VLDSETRKWDSIPPLPSPRYSPATQLW----RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 201 ~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
.||..+..-...... ...-.++... ++..++.|+.+ ..+..|++
T Consensus 194 i~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~ 241 (357)
T 3i2n_A 194 LFDLRNMALRWETNI--KNGVCSLEFDRKDISMNKLVATSLE-----GKFHVFDM 241 (357)
T ss_dssp EEETTTTEEEEEEEC--SSCEEEEEESCSSSSCCEEEEEEST-----TEEEEEEE
T ss_pred EEECccCceeeecCC--CCceEEEEcCCCCCCCCEEEEECCC-----CeEEEEeC
Confidence 899887653222111 1112223332 45666666643 34667775
No 88
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.05 E-value=0.98 Score=46.01 Aligned_cols=160 Identities=11% Similarity=0.080 Sum_probs=82.5
Q ss_pred hcccccccCCCCeEECCCCCCcCCC-ceEEEE-CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCC-CC-CCcce
Q 016413 97 ATFADLPAPDLEWEQMPSAPVPRLD-GAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPK-DM-AHSHL 172 (390)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~~~~R~~-~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~-~~-~r~~~ 172 (390)
.-++.+++.+.+++.......+... .+++.- ++.||+... .-+.+||+.+++|......+. +. ...-.
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~ 498 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH--------AGVFVIDLASKKVIHHYDTSNSQLLENFVR 498 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET--------TEEEEEESSSSSCCEEECTTTSSCSCSCEE
T ss_pred CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC--------CceEEEeCCCCeEEecccCcccccccceeE
Confidence 3678889888888776532111111 122222 467877432 238999999998876643321 00 11122
Q ss_pred EEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCC---CCCCCCCceEEE-ECCEEEEEccCCCCCCCCCc-
Q 016413 173 GVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP---LPSPRYSPATQL-WRGRLHVMGGSKENRHTPGL- 246 (390)
Q Consensus 173 ~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~- 246 (390)
++.. .++.|++-.- ..-+.+||+.+++++.... ++.... .+++. .++.|++... . ..
T Consensus 499 ~i~~d~~g~lWigt~---------~~Gl~~~~~~~~~~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~-~------Glv 561 (781)
T 3v9f_A 499 SIAQDSEGRFWIGTF---------GGGVGIYTPDMQLVRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG-E------GLV 561 (781)
T ss_dssp EEEECTTCCEEEEES---------SSCEEEECTTCCEEEEECTTTTCSCSCE-EEEEECTTSCEEEEET-T------EEE
T ss_pred EEEEcCCCCEEEEEc---------CCCEEEEeCCCCeEEEccCCCCCCCCee-EEEEECCCCCEEEEEC-C------Cce
Confidence 2222 3567777431 1237889999888877653 221111 12222 2567777642 1 11
Q ss_pred ceEEeeeeccccccCCeEEcc---CCCCCCCceeEEEE-CCEEEEEc
Q 016413 247 EHWSIAVKDGKALEKAWRTEI---PIPRGGPHRACFVF-NDRLFVVG 289 (390)
Q Consensus 247 ~~~~~~~~~~~~~~~~W~~~~---~~p~~~~~~~~~~~-~~~iyv~G 289 (390)
.+|+ +.+.+++... .+|.... .+++.- ++.|++.+
T Consensus 562 ~~~d-------~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 562 CFPS-------ARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWAST 600 (781)
T ss_dssp EESC-------TTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEEC
T ss_pred EEEC-------CCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEc
Confidence 2222 5666665542 3454333 233332 57788775
No 89
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.01 E-value=1.2 Score=39.75 Aligned_cols=142 Identities=5% Similarity=0.059 Sum_probs=64.4
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCC-CCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKD-MAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (390)
.+ +++.|+.++ .+.+||+.++....+..+... -...-.+++. -++.+++.|+.++ .+.+||..
T Consensus 24 ~~-~las~~~D~------~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~--------~v~iw~~~ 88 (330)
T 2hes_X 24 QG-ILATGSTDR------KIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS--------TVSIWAKE 88 (330)
T ss_dssp TT-EEEEEESSS------CEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS--------CEEEEEC-
T ss_pred CC-EEEEEcCCC------EEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC--------cEEEEEcc
Confidence 44 777777663 478888887655443333111 0111223333 2566777776543 36667764
Q ss_pred CC-----CeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeE
Q 016413 206 TR-----KWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRAC 278 (390)
Q Consensus 206 ~~-----~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~ 278 (390)
.. .++.+..+......-..+.+ ++++++.|+.+ ..+..|++. .....++.+..+.........
T Consensus 89 ~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D-----~~v~iwd~~-----~~~~~~~~~~~~~~h~~~v~~ 158 (330)
T 2hes_X 89 ESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD-----KSVWIWETD-----ESGEEYECISVLQEHSQDVKH 158 (330)
T ss_dssp ------CCCEEEEEEC----CEEEEEECTTSCEEEEEETT-----SCEEEEECC-----TTCCCCEEEEEECCCSSCEEE
T ss_pred cCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC-----CEEEEEecc-----CCCCCeEEEEEeccCCCceEE
Confidence 32 22222211111111112222 56666776654 457777751 112334433322211111122
Q ss_pred EEE--CCEEEEEcCCCCC
Q 016413 279 FVF--NDRLFVVGGQEGD 294 (390)
Q Consensus 279 ~~~--~~~iyv~GG~~~~ 294 (390)
+.. ++.+++.|+.++.
T Consensus 159 v~~~p~~~~l~s~s~D~~ 176 (330)
T 2hes_X 159 VIWHPSEALLASSSYDDT 176 (330)
T ss_dssp EEECSSSSEEEEEETTSC
T ss_pred EEECCCCCEEEEEcCCCe
Confidence 222 5677788887653
No 90
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.95 E-value=0.31 Score=43.44 Aligned_cols=132 Identities=8% Similarity=0.053 Sum_probs=63.2
Q ss_pred ccEEEEecCCCCCCCccccceeeeeccCCCceEeecCCCCCccccccceEEEecCCC-chhHHHhhhcccccccCCCCe-
Q 016413 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKG-QDAERFLSATFADLPAPDLEW- 109 (390)
Q Consensus 32 ~~~l~~~GG~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~W- 109 (390)
.+.+|+.... ++ .+..||+.+.+.......... .. ++++-.+.. .-....-...++.+|..+.+-
T Consensus 9 ~~~~~v~~~~-~~-------~v~~~d~~~~~~~~~~~~~~~----~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~ 75 (331)
T 3u4y_A 9 SNFGIVVEQH-LR-------RISFFSTDTLEILNQITLGYD----FV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK 75 (331)
T ss_dssp CCEEEEEEGG-GT-------EEEEEETTTCCEEEEEECCCC----EE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE
T ss_pred CCEEEEEecC-CC-------eEEEEeCcccceeeeEEccCC----cc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee
Confidence 4677887765 44 788999988877554333221 11 333322221 001111123677788776653
Q ss_pred -EECCCCCCcCCCceEEEE--CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-CC-EEEEE
Q 016413 110 -EQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GR-YIYIV 184 (390)
Q Consensus 110 -~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~~-~iyv~ 184 (390)
..+.....++ ++++.. +..|| .+...+. ...+.+||+.+.+-...-+... ....++.. ++ .||+.
T Consensus 76 ~~~~~~~~~~~--~~~~~s~dg~~l~-~~~~~~~---~~~i~v~d~~~~~~~~~~~~~~----~~~~~~~spdg~~l~~~ 145 (331)
T 3u4y_A 76 VVAIQEGQSSM--ADVDITPDDQFAV-TVTGLNH---PFNMQSYSFLKNKFISTIPIPY----DAVGIAISPNGNGLILI 145 (331)
T ss_dssp EEEEEECSSCC--CCEEECTTSSEEE-ECCCSSS---SCEEEEEETTTTEEEEEEECCT----TEEEEEECTTSSCEEEE
T ss_pred EEecccCCCCc--cceEECCCCCEEE-EecCCCC---cccEEEEECCCCCeEEEEECCC----CccceEECCCCCEEEEE
Confidence 2221111221 213322 33566 3322211 1269999998887654322221 12344443 34 57777
Q ss_pred ec
Q 016413 185 SG 186 (390)
Q Consensus 185 GG 186 (390)
+.
T Consensus 146 ~~ 147 (331)
T 3u4y_A 146 DR 147 (331)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 91
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=94.91 E-value=0.58 Score=41.21 Aligned_cols=104 Identities=9% Similarity=0.070 Sum_probs=54.3
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe---CCEEEEEeceeCCCCCCCCceEEEEEC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (390)
+++.++.|+.++ .+.+||+.+++...+..+... ...-.+++.. ++.+++.|+.+ ..+.++|.
T Consensus 20 ~g~~las~s~D~------~v~iw~~~~~~~~~~~~l~gH-~~~V~~v~~s~~~~g~~l~s~s~D--------~~v~iWd~ 84 (297)
T 2pm7_B 20 YGKRMATCSSDK------TIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYD--------GKVMIWKE 84 (297)
T ss_dssp TSSEEEEEETTS------CEEEEEBCSSCBCCCEEECCC-SSCEEEEEECCGGGCSEEEEEETT--------TEEEEEEB
T ss_pred CCCEEEEEeCCC------EEEEEecCCCCcEEEEEEccc-cCCeEEEEecCCCcCCEEEEEcCC--------CEEEEEEc
Confidence 567788888764 377788765544333333221 1112233332 25677777653 45778888
Q ss_pred CCCCeEeCCCCCCCCCCceEEEEC----CEEEEEccCCCCCCCCCcceEEe
Q 016413 205 ETRKWDSIPPLPSPRYSPATQLWR----GRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 205 ~~~~W~~~~~~p~~r~~~~~~~~~----~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
.+..|..+..+.........+... +.+++.|+.+ ..+..|++
T Consensus 85 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d-----~~v~~wd~ 130 (297)
T 2pm7_B 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD-----GKVSVVEF 130 (297)
T ss_dssp SSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEEB
T ss_pred CCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC-----CcEEEEEe
Confidence 877776543322211222222221 4566666653 34566664
No 92
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.75 E-value=1 Score=40.79 Aligned_cols=100 Identities=7% Similarity=0.111 Sum_probs=50.7
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe---CCEEEEEeceeCCCCCCCCceEEEEEC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (390)
++..++.|+.++ .+..+|+.+.+-... +... ...-.++... ++.+++.|+.+ ..+..||.
T Consensus 165 ~~~~l~t~s~D~------~v~lwd~~~~~~~~~--~~~h-~~~v~~~~~~~~~~g~~l~sgs~D--------g~v~~wd~ 227 (354)
T 2pbi_B 165 SDMQILTASGDG------TCALWDVESGQLLQS--FHGH-GADVLCLDLAPSETGNTFVSGGCD--------KKAMVWDM 227 (354)
T ss_dssp SSSEEEEEETTS------EEEEEETTTCCEEEE--EECC-SSCEEEEEECCCSSCCEEEEEETT--------SCEEEEET
T ss_pred CCCEEEEEeCCC------cEEEEeCCCCeEEEE--EcCC-CCCeEEEEEEeCCCCCEEEEEeCC--------CeEEEEEC
Confidence 344566666553 588899887764321 1110 0111122221 35677777754 34778898
Q ss_pred CCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEe
Q 016413 205 ETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 205 ~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
.+.+....- .........+.+ ++.+++.|+.+ ..+..|++
T Consensus 228 ~~~~~~~~~--~~h~~~v~~v~~~p~~~~l~s~s~D-----~~v~lwd~ 269 (354)
T 2pbi_B 228 RSGQCVQAF--ETHESDVNSVRYYPSGDAFASGSDD-----ATCRLYDL 269 (354)
T ss_dssp TTCCEEEEE--CCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEET
T ss_pred CCCcEEEEe--cCCCCCeEEEEEeCCCCEEEEEeCC-----CeEEEEEC
Confidence 876643321 111111122222 45677777654 35777775
No 93
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.68 E-value=0.46 Score=43.40 Aligned_cols=21 Identities=14% Similarity=-0.001 Sum_probs=14.6
Q ss_pred EEEEecCCCCCCCccccceeeeeccCCCc
Q 016413 34 FMWASSSSSFSSSSAHLSVASNWALEKSG 62 (390)
Q Consensus 34 ~l~~~GG~~~~~~~~~~~~~~~~d~~~~~ 62 (390)
.+++.|+. ++ .+..||..+..
T Consensus 27 ~~l~s~~~-dg-------~i~iw~~~~~~ 47 (397)
T 1sq9_A 27 SFTVSCSG-DG-------YLKVWDNKLLD 47 (397)
T ss_dssp SEEEEEET-TS-------EEEEEESBCCT
T ss_pred CeEEEEcC-CC-------EEEEEECCCcc
Confidence 56677776 66 77788876655
No 94
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=94.66 E-value=0.39 Score=43.09 Aligned_cols=65 Identities=15% Similarity=0.086 Sum_probs=32.0
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCCC
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (390)
+.+++.|+.++ .+.++|..+.+......+... ...-.++.. .++.+.+.|+.+ ..+..+|..+.
T Consensus 48 ~~~l~tgs~D~------~v~vW~~~~~~~~~~~~l~gh-~~~v~~~~~~~~~~~l~s~s~D--------~~i~lWd~~~~ 112 (321)
T 3ow8_A 48 SETVVTGSLDD------LVKVWKWRDERLDLQWSLEGH-QLGVVSVDISHTLPIAASSSLD--------AHIRLWDLENG 112 (321)
T ss_dssp -CEEEEEETTS------CEEEEEEETTEEEEEEEECCC-SSCEEEEEECSSSSEEEEEETT--------SEEEEEETTTT
T ss_pred CCEEEEEcCCC------CEEEEECCCCCeeeeeeeccC-CCCEEEEEECCCCCEEEEEeCC--------CcEEEEECCCC
Confidence 45788888774 255555544443322122210 111122222 245566666543 45778888776
Q ss_pred C
Q 016413 208 K 208 (390)
Q Consensus 208 ~ 208 (390)
+
T Consensus 113 ~ 113 (321)
T 3ow8_A 113 K 113 (321)
T ss_dssp E
T ss_pred C
Confidence 4
No 95
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.66 E-value=0.28 Score=44.75 Aligned_cols=102 Identities=14% Similarity=0.185 Sum_probs=52.8
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe--CCEEEEEeceeCCCCCCCCceEEEEECC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (390)
+++.++.|+.++ .+.+||+.+.+-... +... ...-.+++.. ++.+++.++.+ ..+.+||..
T Consensus 150 dg~~l~sgs~dg------~v~iwd~~~~~~~~~--~~~h-~~~v~~v~~s~~~~~~~~s~~~d--------g~v~~wd~~ 212 (357)
T 4g56_B 150 DGTQAVSGGKDF------SVKVWDLSQKAVLKS--YNAH-SSEVNCVAACPGKDTIFLSCGED--------GRILLWDTR 212 (357)
T ss_dssp SSSEEEEEETTS------CEEEEETTTTEEEEE--ECCC-SSCEEEEEECTTCSSCEEEEETT--------SCEEECCTT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEE--EcCC-CCCEEEEEEccCCCceeeeeccC--------CceEEEECC
Confidence 567778887764 388899887764332 2211 1112233332 33467777643 347778887
Q ss_pred CCCeEeCCCCCCCCCCceEEEE---CCEEEEEccCCCCCCCCCcceEEe
Q 016413 206 TRKWDSIPPLPSPRYSPATQLW---RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 206 ~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
+.+-...............+.. ++.+++.|+.+ ..+..|++
T Consensus 213 ~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d-----~~i~~wd~ 256 (357)
T 4g56_B 213 KPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDET-----GNVSLVNI 256 (357)
T ss_dssp SSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESS-----SCEEEEES
T ss_pred CCceeeeeeeccccccccchhhhhcccceEEEeecc-----cceeEEEC
Confidence 6543222222222222222332 45677777654 34667774
No 96
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.65 E-value=0.15 Score=45.58 Aligned_cols=132 Identities=10% Similarity=0.012 Sum_probs=65.2
Q ss_pred hcccccccCCCCeEECCCCCCcCCCceEEEE-CC-EEEEEecCCCCCCCCCeEEEEeCCCCce-ee-cCCCCCCCCCcce
Q 016413 97 ATFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KN-LFYVFAGYGSLDYVHSHVDVYNFTDNKW-VD-RFDMPKDMAHSHL 172 (390)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~-~~-~lyv~GG~~~~~~~~~~v~~yd~~~~~W-~~-~~~l~~~~~r~~~ 172 (390)
..+..+|..+.+....-..+. ....++.. ++ .+|+.+..+ ..++++|+.+.+- .. +..... ++...
T Consensus 20 ~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~--~~~~~ 89 (331)
T 3u4y_A 20 RRISFFSTDTLEILNQITLGY--DFVDTAITSDCSNVVVTSDFC------QTLVQIETQLEPPKVVAIQEGQS--SMADV 89 (331)
T ss_dssp TEEEEEETTTCCEEEEEECCC--CEEEEEECSSSCEEEEEESTT------CEEEEEECSSSSCEEEEEEECSS--CCCCE
T ss_pred CeEEEEeCcccceeeeEEccC--CcceEEEcCCCCEEEEEeCCC------CeEEEEECCCCceeEEecccCCC--Cccce
Confidence 367778877776644333221 11223322 34 577776533 3699999988774 22 222111 12112
Q ss_pred EEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEE-CC-EEEEEccCCCCCCCCC-cceE
Q 016413 173 GVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RG-RLHVMGGSKENRHTPG-LEHW 249 (390)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~-~~~~ 249 (390)
+....+..|| .+...+ ....+.+||+.+.+-... ++.....+.++.. ++ .||+.+... .. +..|
T Consensus 90 ~~s~dg~~l~-~~~~~~-----~~~~i~v~d~~~~~~~~~--~~~~~~~~~~~~spdg~~l~~~~~~~-----~~~i~~~ 156 (331)
T 3u4y_A 90 DITPDDQFAV-TVTGLN-----HPFNMQSYSFLKNKFIST--IPIPYDAVGIAISPNGNGLILIDRSS-----ANTVRRF 156 (331)
T ss_dssp EECTTSSEEE-ECCCSS-----SSCEEEEEETTTTEEEEE--EECCTTEEEEEECTTSSCEEEEEETT-----TTEEEEE
T ss_pred EECCCCCEEE-EecCCC-----CcccEEEEECCCCCeEEE--EECCCCccceEECCCCCEEEEEecCC-----CceEEEE
Confidence 2222345676 332110 123799999988765432 2222222334333 33 577776532 24 5666
Q ss_pred Ee
Q 016413 250 SI 251 (390)
Q Consensus 250 ~~ 251 (390)
++
T Consensus 157 ~~ 158 (331)
T 3u4y_A 157 KI 158 (331)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 97
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.58 E-value=0.43 Score=43.56 Aligned_cols=145 Identities=4% Similarity=-0.155 Sum_probs=66.3
Q ss_pred EEEEecCCCCCCCccccceeeeeccCCCceEeecCCCCCccccccceEEEecCC-CchhHHHhhhcccccccCCCCeEEC
Q 016413 34 FMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKK-GQDAERFLSATFADLPAPDLEWEQM 112 (390)
Q Consensus 34 ~l~~~GG~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~W~~~ 112 (390)
.+++.|+. ++ .+..||..+............ ...-.+++..... ..-.....+..+..+|........+
T Consensus 87 ~~l~s~~~-dg-------~i~iwd~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 156 (383)
T 3ei3_B 87 TTVAVGSK-GG-------DIILWDYDVQNKTSFIQGMGP--GDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVF 156 (383)
T ss_dssp TEEEEEEB-TS-------CEEEEETTSTTCEEEECCCST--TCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEE
T ss_pred CEEEEEcC-CC-------eEEEEeCCCcccceeeecCCc--CCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEE
Confidence 45666655 55 677888877766554332111 0111222222211 0000001123455666655444433
Q ss_pred CCCCCcCC-CceEEEE-CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-CCE-EEEEecee
Q 016413 113 PSAPVPRL-DGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRY-IYIVSGQY 188 (390)
Q Consensus 113 ~~~~~~R~-~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~~~-iyv~GG~~ 188 (390)
........ -.+++.. ++++++.|+.++ .+..||+....-..+.... ..-.+++.. ++. +++.|+.+
T Consensus 157 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~h~----~~v~~~~~~~~~~~~l~s~~~d 226 (383)
T 3ei3_B 157 AKTDSWDYWYCCVDVSVSRQMLATGDSTG------RLLLLGLDGHEIFKEKLHK----AKVTHAEFNPRCDWLMATSSVD 226 (383)
T ss_dssp ECCCCSSCCEEEEEEETTTTEEEEEETTS------EEEEEETTSCEEEEEECSS----SCEEEEEECSSCTTEEEEEETT
T ss_pred eccCCCCCCeEEEEECCCCCEEEEECCCC------CEEEEECCCCEEEEeccCC----CcEEEEEECCCCCCEEEEEeCC
Confidence 22221111 1222222 566777777653 5888998654433332211 112233332 343 77777642
Q ss_pred CCCCCCCCceEEEEECCC
Q 016413 189 GPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 189 ~~~~~~~~~~v~~yd~~~ 206 (390)
..+.+||+.+
T Consensus 227 --------~~i~iwd~~~ 236 (383)
T 3ei3_B 227 --------ATVKLWDLRN 236 (383)
T ss_dssp --------SEEEEEEGGG
T ss_pred --------CEEEEEeCCC
Confidence 4577888776
No 98
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.56 E-value=3.8 Score=41.67 Aligned_cols=141 Identities=8% Similarity=0.052 Sum_probs=71.1
Q ss_pred eeeeeccCCCceEeecCCCCCccccccceEEEecCCCchhHHHhhhcccccccCCCCeEECCC-CCCcCCCceEE-EECC
Q 016413 52 VASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQMPS-APVPRLDGAAI-QIKN 129 (390)
Q Consensus 52 ~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~-~~~~R~~~~~~-~~~~ 129 (390)
.+.+||+.+.+...+......+... -..++. ...+.---. ....++.|+..+.++..+.. ++....-.++. .-++
T Consensus 108 Gl~~yd~~~~~f~~~~~~~~~~~~~-i~~i~~-d~~g~lwi~-t~~gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g 184 (795)
T 4a2l_A 108 GLSRYDEEKDIFQNFFYEKNGKHLQ-VNGIEE-ISPEQLLIS-TPEGLIMFDIKESKFIDDSFSTAMHKTIASTLYRQGD 184 (795)
T ss_dssp CEEEEETTTTEEEEECCEETTEECC-CCEEEE-EETTEEEEE-ETTEEEEEETTTTEEECSSSCHHHHTCCEEEEEEETT
T ss_pred chheeCCCCCeEEeccccccCCCce-EEEEEE-CCCCCEEEE-ECCceEEEECCCCEEEeccCCCCCCcceEEEEECCCC
Confidence 4678998888877765422210000 111111 111111000 11257788887777665433 11111011222 2378
Q ss_pred EEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEE-EeCCEEEEEeceeCCCCCCCCceEEEEECCCCC
Q 016413 130 LFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV-SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK 208 (390)
Q Consensus 130 ~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 208 (390)
.|||.. .. .-+.+||+.++++......+. ...-.++. ..++.|+|..- ..-+++||+.+++
T Consensus 185 ~lwigt-~~------~Gl~~~~~~~~~~~~~~~~~~--~~~i~~i~~d~~g~lwigt~---------~~Gl~~~~~~~~~ 246 (795)
T 4a2l_A 185 QIYIGT-ST------DGLYTYSITQKTFEKVIPILG--TKQIQAILQQSPTRIWVATE---------GAGLFLINPKTKE 246 (795)
T ss_dssp EEEEEE-SS------SCEEEEETTTCCEEECC------CCCEEEEEEEETTEEEEEEB---------SSCEEEEETTTTE
T ss_pred CEEEEE-CC------CCEEEEeCCCCeEEEecCCCC--CCeeEEEEEcCCCCEEEEEC---------CCCeEEEeCCCCe
Confidence 888832 11 138899999999887643221 11122222 34678887431 1238899999988
Q ss_pred eEeCC
Q 016413 209 WDSIP 213 (390)
Q Consensus 209 W~~~~ 213 (390)
++...
T Consensus 247 ~~~~~ 251 (795)
T 4a2l_A 247 IKNYL 251 (795)
T ss_dssp EEEEC
T ss_pred EEEee
Confidence 87764
No 99
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=94.55 E-value=0.78 Score=41.49 Aligned_cols=35 Identities=6% Similarity=0.060 Sum_probs=19.5
Q ss_pred ccEEEEecCCCCCCCccccceeeeeccCCCceEeecC
Q 016413 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPH 68 (390)
Q Consensus 32 ~~~l~~~GG~~~~~~~~~~~~~~~~d~~~~~W~~l~~ 68 (390)
++..+.+|.+..+.+..+ .++.+|+.+.+...+..
T Consensus 12 ~~~~~~vg~y~~~~~~~i--~~~~~d~~~g~~~~~~~ 46 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGI--YTFRFNEETGESLPLSD 46 (361)
T ss_dssp GEEEEEEEECCSSSCCEE--EEEEEETTTCCEEEEEE
T ss_pred CceEEEEEeccCCCCCCE--EEEEEeCCCCCEEEeec
Confidence 445566787743311222 45566777777766544
No 100
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.51 E-value=0.41 Score=42.93 Aligned_cols=105 Identities=7% Similarity=-0.002 Sum_probs=52.2
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-CCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
++++++.|+.++ .+.+||..+.+-.. .+... ...-.+++.. ++..++.|+. -..+.+||..+
T Consensus 43 ~~~~l~~~~~dg------~i~vwd~~~~~~~~--~~~~h-~~~v~~~~~~~~~~~l~s~~~--------dg~i~iwd~~~ 105 (369)
T 3zwl_B 43 EGDLLFSCSKDS------SASVWYSLNGERLG--TLDGH-TGTIWSIDVDCFTKYCVTGSA--------DYSIKLWDVSN 105 (369)
T ss_dssp TSCEEEEEESSS------CEEEEETTTCCEEE--EECCC-SSCEEEEEECTTSSEEEEEET--------TTEEEEEETTT
T ss_pred CCCEEEEEeCCC------EEEEEeCCCchhhh--hhhhc-CCcEEEEEEcCCCCEEEEEeC--------CCeEEEEECCC
Confidence 556777777653 48888987765432 22211 1112223332 4566667654 24588889887
Q ss_pred CCeEeCCCCCCCCCCceEEE-ECCEEEEEccCCCCCCCCCcceEEe
Q 016413 207 RKWDSIPPLPSPRYSPATQL-WRGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
.+-...-..+. .-.++.. -++..++.++.........+..|++
T Consensus 106 ~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~ 149 (369)
T 3zwl_B 106 GQCVATWKSPV--PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEI 149 (369)
T ss_dssp CCEEEEEECSS--CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEE
T ss_pred CcEEEEeecCC--CeEEEEEccCCCEEEEecCCccCCCCEEEEEEe
Confidence 65433322111 1112222 2455555555432222345667765
No 101
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.45 E-value=1.3 Score=45.14 Aligned_cols=203 Identities=10% Similarity=0.020 Sum_probs=101.7
Q ss_pred eeeeeccCCCceEeecCCCCCccccccceEEEecC-CCchhHHHhhhcccccccCCCCeEECCCCCC-c--CCCceEEEE
Q 016413 52 VASNWALEKSGVVVIPHVNATKIDRQRESVAVIDK-KGQDAERFLSATFADLPAPDLEWEQMPSAPV-P--RLDGAAIQI 127 (390)
Q Consensus 52 ~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~-~--R~~~~~~~~ 127 (390)
-+.+||+.++++..+.....+ . ..-.++..+ .+.---... .-++.|++.+.+|+.....+. . .........
T Consensus 428 Gl~~~~~~~~~~~~~~~~~~~---~-~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 502 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELEKNE---L-LDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQ 502 (781)
T ss_dssp EEEEECSSSCEEEECCSTTTC---C-CCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEE
T ss_pred CEEEEcCCCCcEEEeccCCCC---C-CeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEE
Confidence 577889888888777542111 0 111122222 221110111 367888888888766543221 1 111111222
Q ss_pred --CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCC-CCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceE-EEE
Q 016413 128 --KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMP-KDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRT-FVL 202 (390)
Q Consensus 128 --~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~-~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v-~~y 202 (390)
++.|++..-. .-+.+||+.+++++....-. .+ ...-.++.. .++.|++-.. .-+ .+|
T Consensus 503 d~~g~lWigt~~-------~Gl~~~~~~~~~~~~~~~~~~l~-~~~i~~i~~d~~g~lWi~T~----------~Glv~~~ 564 (781)
T 3v9f_A 503 DSEGRFWIGTFG-------GGVGIYTPDMQLVRKFNQYEGFC-SNTINQIYRSSKGQMWLATG----------EGLVCFP 564 (781)
T ss_dssp CTTCCEEEEESS-------SCEEEECTTCCEEEEECTTTTCS-CSCEEEEEECTTSCEEEEET----------TEEEEES
T ss_pred cCCCCEEEEEcC-------CCEEEEeCCCCeEEEccCCCCCC-CCeeEEEEECCCCCEEEEEC----------CCceEEE
Confidence 4677774321 12888999999888764311 11 111223333 3577777531 235 889
Q ss_pred ECCCCCeEeCC---CCCCCCCCceEEEE-CCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEcc---CCCCCCCc
Q 016413 203 DSETRKWDSIP---PLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEI---PIPRGGPH 275 (390)
Q Consensus 203 d~~~~~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~---~~p~~~~~ 275 (390)
|+++++++... .+|.... .+++.. ++.|++.+.. .+.+|+ |.+.+++... .++...+.
T Consensus 565 d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~~-------Gl~~~~-------~~~~~~~~~~~~dGl~~~~f~ 629 (781)
T 3v9f_A 565 SARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTNT-------GISCYI-------TSKKCFYTYDHSNNIPQGSFI 629 (781)
T ss_dssp CTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECSS-------CEEEEE-------TTTTEEEEECGGGTCCSSCEE
T ss_pred CCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEcCC-------ceEEEE-------CCCCceEEecccCCccccccc
Confidence 99888877664 2443322 233333 5778887521 234444 5666665542 34444332
Q ss_pred e-eEEEE-CCEEEEEcCCCC
Q 016413 276 R-ACFVF-NDRLFVVGGQEG 293 (390)
Q Consensus 276 ~-~~~~~-~~~iyv~GG~~~ 293 (390)
. +++.. +++| .+||.++
T Consensus 630 ~~~~~~~~~G~l-~~g~~~G 648 (781)
T 3v9f_A 630 SGCVTKDHNGLI-YFGSING 648 (781)
T ss_dssp EEEEEECTTSCE-EEEETTE
T ss_pred cCceEECCCCEE-EEECCCc
Confidence 2 33333 4555 5566554
No 102
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=94.40 E-value=1.2 Score=39.84 Aligned_cols=65 Identities=6% Similarity=-0.042 Sum_probs=36.2
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeec-CCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDR-FDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~-~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (390)
++.+++.|+.++ .+.+||+.+.+-... ..+... ...-.+++. -++..++.|+.+ ..+.+||..
T Consensus 127 ~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d--------g~i~i~d~~ 191 (366)
T 3k26_A 127 DPNLLLSVSKDH------ALRLWNIQTDTLVAIFGGVEGH-RDEVLSADYDLLGEKIMSCGMD--------HSLKLWRIN 191 (366)
T ss_dssp CTTEEEEEETTS------CEEEEETTTTEEEEEECSTTSC-SSCEEEEEECTTSSEEEEEETT--------SCEEEEESC
T ss_pred CCCEEEEEeCCC------eEEEEEeecCeEEEEecccccc-cCceeEEEECCCCCEEEEecCC--------CCEEEEECC
Confidence 557788887763 488899987764332 111211 112223333 245566676643 347788877
Q ss_pred CC
Q 016413 206 TR 207 (390)
Q Consensus 206 ~~ 207 (390)
+.
T Consensus 192 ~~ 193 (366)
T 3k26_A 192 SK 193 (366)
T ss_dssp SH
T ss_pred CC
Confidence 54
No 103
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=94.30 E-value=2.4 Score=36.67 Aligned_cols=95 Identities=12% Similarity=0.055 Sum_probs=48.9
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCC-C-CCCcceEEEE--eCCEEEEEeceeCCCCCCCCceEEEEE
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPK-D-MAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLD 203 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~-~-~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd 203 (390)
++.+||....+ ..+.+||+....-..+..... + ....-.++++ .++.||+.+.. ....+.+||
T Consensus 40 ~g~l~v~~~~~------~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~-------~~~~i~~~d 106 (286)
T 1q7f_A 40 QNDIIVADTNN------HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-------PTHQIQIYN 106 (286)
T ss_dssp TCCEEEEEGGG------TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-------GGCEEEEEC
T ss_pred CCCEEEEECCC------CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC-------CCCEEEEEC
Confidence 46788876432 358899988654443332110 0 0112334454 37899998631 135688898
Q ss_pred CCCCCeEeCCCCCCCCCCceEEE-ECCEEEEEcc
Q 016413 204 SETRKWDSIPPLPSPRYSPATQL-WRGRLHVMGG 236 (390)
Q Consensus 204 ~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG 236 (390)
+....-..+.... ...-..+++ -+++|||...
T Consensus 107 ~~g~~~~~~~~~~-~~~~~~i~~~~~g~l~v~~~ 139 (286)
T 1q7f_A 107 QYGQFVRKFGATI-LQHPRGVTVDNKGRIIVVEC 139 (286)
T ss_dssp TTSCEEEEECTTT-CSCEEEEEECTTSCEEEEET
T ss_pred CCCcEEEEecCcc-CCCceEEEEeCCCCEEEEEC
Confidence 6554333332111 111123333 2567888754
No 104
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.27 E-value=0.79 Score=42.86 Aligned_cols=148 Identities=7% Similarity=-0.088 Sum_probs=66.9
Q ss_pred ccEEEEecCCCCCCCccccceeeeeccCCCceEeecCCCCCccccccceEEEecCCC-chhHHHhhhcccccccCCCCeE
Q 016413 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKG-QDAERFLSATFADLPAPDLEWE 110 (390)
Q Consensus 32 ~~~l~~~GG~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~W~ 110 (390)
++.+++.|+. +| .+..||..+..-..+-..... ...-.+++.....+ .-.....+..+..+|..++...
T Consensus 131 ~~~~lasGs~-dg-------~i~lWd~~~~~~~~~~~~~gH--~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 131 HPSTVAVGSK-GG-------DIMLWNFGIKDKPTFIKGIGA--GGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILR 200 (435)
T ss_dssp CTTCEEEEET-TS-------CEEEECSSCCSCCEEECCCSS--SCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEE
T ss_pred CCCEEEEEeC-CC-------EEEEEECCCCCceeEEEccCC--CCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCcee
Confidence 4557777777 66 677888766654332222111 01112223221111 0000011224555665554433
Q ss_pred ECCCCCCcCC-CceEEEE-CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe--CCEEEEEec
Q 016413 111 QMPSAPVPRL-DGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSG 186 (390)
Q Consensus 111 ~~~~~~~~R~-~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~--~~~iyv~GG 186 (390)
.+........ ..++... ++++++.|+.++ .+..+|..++. +..+... ...-.+++.. +..+++.|+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg------~i~~wd~~~~~---~~~~~~h-~~~v~~v~~~p~~~~~~~s~s 270 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMVVTGDNVG------NVILLNMDGKE---LWNLRMH-KKKVTHVALNPCCDWFLATAS 270 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEEEEECSSS------BEEEEESSSCB---CCCSBCC-SSCEEEEEECTTCSSEEEEEE
T ss_pred EEeccCCCCccEEEEEECCCCCEEEEEeCCC------cEeeeccCcce---eEEEecc-cceEEeeeecCCCceEEEEec
Confidence 3322221111 1223222 567888888664 48888887643 2222210 0111223332 345777776
Q ss_pred eeCCCCCCCCceEEEEECCCC
Q 016413 187 QYGPQCRGPTSRTFVLDSETR 207 (390)
Q Consensus 187 ~~~~~~~~~~~~v~~yd~~~~ 207 (390)
.++ .+.+||..+.
T Consensus 271 ~d~--------~v~iwd~~~~ 283 (435)
T 4e54_B 271 VDQ--------TVKIWDLRQV 283 (435)
T ss_dssp TTS--------BCCEEETTTC
T ss_pred Ccc--------eeeEEecccc
Confidence 543 3556787654
No 105
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=94.20 E-value=2.5 Score=36.51 Aligned_cols=119 Identities=8% Similarity=-0.004 Sum_probs=58.8
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEE-ECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQ-IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~ 176 (390)
.+..+|+. .+............-++++. -++.+|+..... ..+.+||+. .+...+. ++.. ...-.+++.
T Consensus 37 ~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~-g~~~~~~-~~~~-~~~~~~i~~ 106 (299)
T 2z2n_A 37 MISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAA------NKIGRITKK-GIIKEYT-LPNP-DSAPYGITE 106 (299)
T ss_dssp EEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTT------TEEEEECTT-SCEEEEE-CSST-TCCEEEEEE
T ss_pred cEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCC------CeEEEECCC-CcEEEEe-CCCc-CCCceeeEE
Confidence 56677766 55554321111111122222 256788875422 358899986 4454432 2211 122334444
Q ss_pred e-CCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEE-CCEEEEEc
Q 016413 177 D-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMG 235 (390)
Q Consensus 177 ~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~G 235 (390)
. ++.||+.... ...+.+||+ +.+............-..++.. ++++|+..
T Consensus 107 ~~~g~l~v~~~~--------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 158 (299)
T 2z2n_A 107 GPNGDIWFTEMN--------GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTE 158 (299)
T ss_dssp CTTSCEEEEETT--------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred CCCCCEEEEecC--------CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEe
Confidence 3 5788887531 356888998 5555443211111122233333 56788864
No 106
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.12 E-value=0.9 Score=42.19 Aligned_cols=65 Identities=9% Similarity=-0.005 Sum_probs=35.1
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
++..++.|+.++ .+.+||+.+..-... +... ...-..+.. .++.+++.|+.+ ..+.+||..+
T Consensus 203 ~~~~l~s~s~D~------~i~~wd~~~~~~~~~--~~~h-~~~v~~~~~~~~g~~l~s~s~D--------~~v~vwd~~~ 265 (410)
T 1vyh_C 203 NGDHIVSASRDK------TIKMWEVQTGYCVKT--FTGH-REWVRMVRPNQDGTLIASCSND--------QTVRVWVVAT 265 (410)
T ss_dssp SSSEEEEEETTS------EEEEEETTTCCEEEE--EECC-SSCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEE--EeCC-CccEEEEEECCCCCEEEEEcCC--------CeEEEEECCC
Confidence 456777787663 588899887653221 1110 011112222 356677777643 3366777766
Q ss_pred CCe
Q 016413 207 RKW 209 (390)
Q Consensus 207 ~~W 209 (390)
...
T Consensus 266 ~~~ 268 (410)
T 1vyh_C 266 KEC 268 (410)
T ss_dssp CCE
T ss_pred Cce
Confidence 543
No 107
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.06 E-value=0.38 Score=44.43 Aligned_cols=104 Identities=12% Similarity=-0.031 Sum_probs=52.5
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceee-----cCCCCCCCCCcceEEEEe-CC-EEEEEeceeCCCCCCCCceEE
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-----RFDMPKDMAHSHLGVVSD-GR-YIYIVSGQYGPQCRGPTSRTF 200 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~-----~~~l~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~v~ 200 (390)
++.+++.|+.++ .+.+||..++.... +..+... ...-.+++.. ++ .+++.|+.+ ..+.
T Consensus 93 ~~~~l~s~s~dg------~v~vw~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~l~s~~~d--------g~i~ 157 (402)
T 2aq5_A 93 NDNVIASGSEDC------TVMVWEIPDGGLVLPLREPVITLEGH-TKRVGIVAWHPTAQNVLLSAGCD--------NVIL 157 (402)
T ss_dssp CTTEEEEEETTS------EEEEEECCTTCCSSCBCSCSEEEECC-SSCEEEEEECSSBTTEEEEEETT--------SCEE
T ss_pred CCCEEEEEeCCC------eEEEEEccCCCCccccCCceEEecCC-CCeEEEEEECcCCCCEEEEEcCC--------CEEE
Confidence 567888887663 48888888775421 1111111 1112223332 32 477777643 3478
Q ss_pred EEECCCCCeEeCCC-CCCCCCCceEEEE-CCEEEEEccCCCCCCCCCcceEEe
Q 016413 201 VLDSETRKWDSIPP-LPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 201 ~yd~~~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
+||..+.+....-. ......-.+++.. ++.+++.|+.+ ..+..|++
T Consensus 158 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~ 205 (402)
T 2aq5_A 158 VWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEP 205 (402)
T ss_dssp EEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEET
T ss_pred EEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-----CcEEEEeC
Confidence 89988765432211 1111111222222 56666666643 35677774
No 108
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.00 E-value=0.6 Score=42.57 Aligned_cols=62 Identities=15% Similarity=0.176 Sum_probs=32.3
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-C-CEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-G-RYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
+.+++.|+.++ .+..||+.+.+-.. .+... ...-.+++.. + ..+++.|+.+ ..+..||..+
T Consensus 156 ~~~~~~~~~~~------~v~~~d~~~~~~~~--~~~~~-~~~v~~~~~~~~~~~ll~~~~~d--------g~i~i~d~~~ 218 (408)
T 4a11_B 156 HCLVAVGTRGP------KVQLCDLKSGSCSH--ILQGH-RQEILAVSWSPRYDYILATASAD--------SRVKLWDVRR 218 (408)
T ss_dssp CCEEEEEESSS------SEEEEESSSSCCCE--EECCC-CSCEEEEEECSSCTTEEEEEETT--------SCEEEEETTC
T ss_pred CcEEEEEcCCC------eEEEEeCCCcceee--eecCC-CCcEEEEEECCCCCcEEEEEcCC--------CcEEEEECCC
Confidence 34777777653 48889987654322 12111 1112223332 2 3377777643 3477788765
Q ss_pred C
Q 016413 207 R 207 (390)
Q Consensus 207 ~ 207 (390)
.
T Consensus 219 ~ 219 (408)
T 4a11_B 219 A 219 (408)
T ss_dssp S
T ss_pred C
Confidence 4
No 109
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=93.96 E-value=3 Score=36.53 Aligned_cols=31 Identities=13% Similarity=0.044 Sum_probs=21.3
Q ss_pred CCEEEEEcCCCCCCCcceeeEEeeeEEEeecCc-cceeeccCCC
Q 016413 347 NNSIIITGGTTEKHPMTKRMILVGEVFQFHLDS-LVIIYHYRPP 389 (390)
Q Consensus 347 ~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~-~~W~~v~~~P 389 (390)
++++++.||.++. |.+||+.+ +.|..+..++
T Consensus 317 ~~~~l~s~~~dg~------------v~iw~~~~~~~~~~~~~~~ 348 (351)
T 3f3f_A 317 TGTILSSAGDDGK------------VRLWKATYSNEFKCMSVIT 348 (351)
T ss_dssp SSCCEEEEETTSC------------EEEEEECTTSCEEEEEEEC
T ss_pred CCCEEEEecCCCc------------EEEEecCcCcchhheeehc
Confidence 6778888886644 77888776 4777766543
No 110
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=93.84 E-value=0.64 Score=45.32 Aligned_cols=24 Identities=0% Similarity=-0.079 Sum_probs=17.0
Q ss_pred ccEEEEecCCCCCCCccccceeeeeccCCCce
Q 016413 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGV 63 (390)
Q Consensus 32 ~~~l~~~GG~~~~~~~~~~~~~~~~d~~~~~W 63 (390)
++.+|+.+.. ++ ++..+|..+.+-
T Consensus 148 ~~~~~vs~~~-d~-------~V~v~D~~t~~~ 171 (543)
T 1nir_A 148 PNLFSVTLRD-AG-------QIALVDGDSKKI 171 (543)
T ss_dssp GGEEEEEEGG-GT-------EEEEEETTTCCE
T ss_pred CCEEEEEEcC-CC-------eEEEEECCCceE
Confidence 6778877755 44 677888877654
No 111
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=93.83 E-value=3.3 Score=36.55 Aligned_cols=93 Identities=5% Similarity=-0.013 Sum_probs=46.7
Q ss_pred hccccccc-CCCCeEECCCCCCcCCCceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCc-------eeecCCCCCCCC
Q 016413 97 ATFADLPA-PDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK-------WVDRFDMPKDMA 168 (390)
Q Consensus 97 ~~~~~~~~-~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~-------W~~~~~l~~~~~ 168 (390)
..+..++. .+.+-..+...+....-.++....+.+++.|+.++ .+..||+.+.. .+.+..+.. .
T Consensus 79 g~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~------~i~iwd~~~~~~~~~~~~~~~~~~~~~--~ 150 (342)
T 1yfq_A 79 GEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDG------LIEVIDPRNYGDGVIAVKNLNSNNTKV--K 150 (342)
T ss_dssp SCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTS------EEEEECHHHHTTBCEEEEESCSSSSSS--C
T ss_pred CeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCCC------eEEEEcccccccccccccCCeeeEEee--C
Confidence 36777777 66655544331111111223333356666776653 47788876400 223333332 1
Q ss_pred CcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 169 HSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 169 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
..-.+++...+. +++|+. -..+..||..+
T Consensus 151 ~~v~~~~~~~~~-l~~~~~--------d~~i~i~d~~~ 179 (342)
T 1yfq_A 151 NKIFTMDTNSSR-LIVGMN--------NSQVQWFRLPL 179 (342)
T ss_dssp CCEEEEEECSSE-EEEEES--------TTEEEEEESSC
T ss_pred CceEEEEecCCc-EEEEeC--------CCeEEEEECCc
Confidence 223344555555 555542 34688899876
No 112
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=93.71 E-value=3.1 Score=35.88 Aligned_cols=91 Identities=5% Similarity=0.006 Sum_probs=49.5
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
++.||+....+ ..+.+||+. .+...+. ++... ..-.+++. -++.||+... ....+.+||+.
T Consensus 30 ~g~l~v~~~~~------~~v~~~~~~-~~~~~~~-~~~~~-~~~~~i~~~~~g~l~v~~~--------~~~~v~~~d~~- 91 (300)
T 2qc5_A 30 DGKVWFTQHKA------NKISSLDQS-GRIKEFE-VPTPD-AKVMCLIVSSLGDIWFTEN--------GANKIGKLSKK- 91 (300)
T ss_dssp TSCEEEEETTT------TEEEEECTT-SCEEEEE-CSSTT-CCEEEEEECTTSCEEEEET--------TTTEEEEECTT-
T ss_pred CCCEEEEcCCC------CeEEEECCC-CceEEEE-CCCCC-CcceeEEECCCCCEEEEec--------CCCeEEEECCC-
Confidence 56888865322 358899988 6665532 22211 12233443 3578888742 13568899988
Q ss_pred CCeEeCCCCCCCCCCceEEEE-CCEEEEEcc
Q 016413 207 RKWDSIPPLPSPRYSPATQLW-RGRLHVMGG 236 (390)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG 236 (390)
.+.+..........-+.++.. ++++|+...
T Consensus 92 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 122 (300)
T 2qc5_A 92 GGFTEYPLPQPDSGPYGITEGLNGDIWFTQL 122 (300)
T ss_dssp SCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred CCeEEecCCCCCCCCccceECCCCCEEEEcc
Confidence 666544211111222333333 578888753
No 113
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.70 E-value=0.34 Score=45.47 Aligned_cols=104 Identities=12% Similarity=0.018 Sum_probs=56.4
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE--eCCEEEEEeceeCCCCCCCCceEEEEECC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (390)
++.+++.|+.++ .|.+||+.+..-..+-.+... ...-.+++. .++.+++.|+.++ .+.+||.+
T Consensus 131 ~~~~lasGs~dg------~i~lWd~~~~~~~~~~~~~gH-~~~V~~l~f~p~~~~~l~s~s~D~--------~v~iwd~~ 195 (435)
T 4e54_B 131 HPSTVAVGSKGG------DIMLWNFGIKDKPTFIKGIGA-GGSITGLKFNPLNTNQFYASSMEG--------TTRLQDFK 195 (435)
T ss_dssp CTTCEEEEETTS------CEEEECSSCCSCCEEECCCSS-SCCCCEEEECSSCTTEEEEECSSS--------CEEEEETT
T ss_pred CCCEEEEEeCCC------EEEEEECCCCCceeEEEccCC-CCCEEEEEEeCCCCCEEEEEeCCC--------EEEEeecc
Confidence 456888888775 388888877654333222111 111223343 3566777776543 36778888
Q ss_pred CCCeEeCCCCCC-CCCCceEE-EECCEEEEEccCCCCCCCCCcceEEe
Q 016413 206 TRKWDSIPPLPS-PRYSPATQ-LWRGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 206 ~~~W~~~~~~p~-~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
++.-..+..... .....++. .-++.+++.|+.+ ..+..|++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d-----g~i~~wd~ 238 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNV-----GNVILLNM 238 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS-----SBEEEEES
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCC-----CcEeeecc
Confidence 766554432211 11122233 3356677777654 34667774
No 114
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.48 E-value=6.1 Score=38.59 Aligned_cols=100 Identities=14% Similarity=0.213 Sum_probs=58.4
Q ss_pred ceEEEECCEEEEEecCCCCCCCCCeEEEEeC-CCC--ceeecCCCCCCC---C---CcceEEEEeCCEEEEEeceeCCCC
Q 016413 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNF-TDN--KWVDRFDMPKDM---A---HSHLGVVSDGRYIYIVSGQYGPQC 192 (390)
Q Consensus 122 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~-~~~--~W~~~~~l~~~~---~---r~~~~~~~~~~~iyv~GG~~~~~~ 192 (390)
.+.++.++.||+....+ ..+..+|. .+. .|+.-...+... . ....+.++.+++||+...
T Consensus 56 ~~P~v~~g~vyv~~~~~------~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------ 123 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFP------NNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------ 123 (571)
T ss_dssp SCCEEETTEEEEECSTT------TCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------
T ss_pred cccEEECCEEEEEeCCC------CEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------
Confidence 44567799999986531 35899998 665 487643322100 0 012245668999988742
Q ss_pred CCCCceEEEEECCCC--CeEeCCCC-CCC-CCCceEEEECCEEEEEcc
Q 016413 193 RGPTSRTFVLDSETR--KWDSIPPL-PSP-RYSPATQLWRGRLHVMGG 236 (390)
Q Consensus 193 ~~~~~~v~~yd~~~~--~W~~~~~~-p~~-r~~~~~~~~~~~iyv~GG 236 (390)
...+..+|.++. .|+.-..- +.. ....+-++.++.+|+-.+
T Consensus 124 ---dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~ 168 (571)
T 2ad6_A 124 ---NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCS 168 (571)
T ss_dssp ---TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECB
T ss_pred ---CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEec
Confidence 356889998776 48753221 111 112233467888887653
No 115
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=93.43 E-value=0.91 Score=41.17 Aligned_cols=106 Identities=8% Similarity=0.003 Sum_probs=51.5
Q ss_pred EEECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCC-CCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEE
Q 016413 125 IQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPK-DMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVL 202 (390)
Q Consensus 125 ~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~-~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~y 202 (390)
+...+..++.|+.++ .|.+||+.+++-........ .-...-.+++. -+++.++.|+.+ ..+.++
T Consensus 89 ~~s~d~~l~~~s~dg------~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d--------~~i~iw 154 (344)
T 4gqb_B 89 TWVGERGILVASDSG------AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD--------ICIKVW 154 (344)
T ss_dssp EEETTTEEEEEETTS------EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT--------SCEEEE
T ss_pred EEeCCCeEEEEECCC------EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC--------CeEEEE
Confidence 334444556676553 48888887765322111100 00011122333 366777777654 347788
Q ss_pred ECCCCCeEeCCCCCCCCCCceEEEE---CCEEEEEccCCCCCCCCCcceEEe
Q 016413 203 DSETRKWDSIPPLPSPRYSPATQLW---RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 203 d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
|+.+.+- +..+......-..+.+ +..+++.|+.+ ..+..||+
T Consensus 155 d~~~~~~--~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D-----~~v~iwd~ 199 (344)
T 4gqb_B 155 DLAQQVV--LSSYRAHAAQVTCVAASPHKDSVFLSCSED-----NRILLWDT 199 (344)
T ss_dssp ETTTTEE--EEEECCCSSCEEEEEECSSCTTEEEEEETT-----SCEEEEET
T ss_pred ECCCCcE--EEEEcCcCCceEEEEecCCCCCceeeeccc-----cccccccc
Confidence 8877542 2222211111112222 33577777654 35777875
No 116
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=93.39 E-value=1.8 Score=38.21 Aligned_cols=63 Identities=16% Similarity=0.176 Sum_probs=31.9
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCC-CceeecC--CCCCCCCCcceEEEE--eCCEEEEEeceeCCCCCCCCceEEEEE
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTD-NKWVDRF--DMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLD 203 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~-~~W~~~~--~l~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd 203 (390)
..||+.+..+ ..+.+||+.+ .+...+. ....+....-..++. .+..+|+.+.. ...+.+||
T Consensus 141 ~~l~~~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~--------~~~i~~~~ 206 (343)
T 1ri6_A 141 RTLWVPALKQ------DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL--------NSSVDVWE 206 (343)
T ss_dssp SEEEEEEGGG------TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT--------TTEEEEEE
T ss_pred CEEEEecCCC------CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC--------CCEEEEEE
Confidence 3677765333 3588899887 6554332 111111111112333 23457777532 35678888
Q ss_pred CC
Q 016413 204 SE 205 (390)
Q Consensus 204 ~~ 205 (390)
..
T Consensus 207 ~~ 208 (343)
T 1ri6_A 207 LK 208 (343)
T ss_dssp SS
T ss_pred ec
Confidence 74
No 117
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=93.37 E-value=1.9 Score=39.55 Aligned_cols=100 Identities=11% Similarity=0.022 Sum_probs=51.4
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-CCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
++++++.|+.++ .+.+||+.+.+-... +... ...-.+++.. ++.+++.|+.+ ..+.+||..+
T Consensus 108 ~~~~l~~~~~dg------~i~iwd~~~~~~~~~--~~~h-~~~v~~~~~~~~~~~l~s~s~d--------~~i~iwd~~~ 170 (420)
T 3vl1_A 108 QMRRFILGTTEG------DIKVLDSNFNLQREI--DQAH-VSEITKLKFFPSGEALISSSQD--------MQLKIWSVKD 170 (420)
T ss_dssp SSCEEEEEETTS------CEEEECTTSCEEEEE--TTSS-SSCEEEEEECTTSSEEEEEETT--------SEEEEEETTT
T ss_pred CCCEEEEEECCC------CEEEEeCCCcceeee--cccc-cCccEEEEECCCCCEEEEEeCC--------CeEEEEeCCC
Confidence 667888887663 488899887654332 2111 1122233332 56666676642 4588888876
Q ss_pred CCeEeCCCCCCCCCC-ceEEEE-CCEEEEEccCCCCCCCCCcceEEe
Q 016413 207 RKWDSIPPLPSPRYS-PATQLW-RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 207 ~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
.+- +..+...... .+++.. ++.+++.|+.+ ..+..|++
T Consensus 171 ~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~ 210 (420)
T 3vl1_A 171 GSN--PRTLIGHRATVTDIAIIDRGRNVLSASLD-----GTIRLWEC 210 (420)
T ss_dssp CCC--CEEEECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEET
T ss_pred CcC--ceEEcCCCCcEEEEEEcCCCCEEEEEcCC-----CcEEEeEC
Confidence 431 1111111111 122222 45566666654 34667764
No 118
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=93.37 E-value=2.1 Score=42.34 Aligned_cols=243 Identities=9% Similarity=-0.082 Sum_probs=114.4
Q ss_pred hcccccccC--C-CCeEECCCCCC----cCCCceEEEECCEEEEEecCCCC----CCCCCeEEEEeCCC------Cceee
Q 016413 97 ATFADLPAP--D-LEWEQMPSAPV----PRLDGAAIQIKNLFYVFAGYGSL----DYVHSHVDVYNFTD------NKWVD 159 (390)
Q Consensus 97 ~~~~~~~~~--~-~~W~~~~~~~~----~R~~~~~~~~~~~lyv~GG~~~~----~~~~~~v~~yd~~~------~~W~~ 159 (390)
..++.++.. . ..-..+...+. .+....+..-+++.+++...+.. .....+++++|+.+ .+-+.
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 181 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE 181 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE
Confidence 357777765 3 45555555431 11111122225555555443311 11235799999988 66665
Q ss_pred cC-CCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECC-CCCeEeCCCCCCC--CCCceEEE-ECCEEEEE
Q 016413 160 RF-DMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSE-TRKWDSIPPLPSP--RYSPATQL-WRGRLHVM 234 (390)
Q Consensus 160 ~~-~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~-~~~W~~~~~~p~~--r~~~~~~~-~~~~iyv~ 234 (390)
+. .-.. ........-+++..++...+.....-...+++++|.. +..+.....+... ......+. -+++||+.
T Consensus 182 l~~~~~~---~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~ 258 (662)
T 3azo_A 182 LSDDAHR---FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVA 258 (662)
T ss_dssp SSCSCSS---EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEE
T ss_pred EEecCCC---cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEE
Confidence 54 2211 1111122235554444443332110124689999998 4633222222111 11112222 26677766
Q ss_pred ccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCC----C---ceeEEEE-CCEEEEEcCCCCCCCCCCCCCcccc
Q 016413 235 GGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGG----P---HRACFVF-NDRLFVVGGQEGDFMAKPGSPIFKC 306 (390)
Q Consensus 235 GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~----~---~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~ 306 (390)
+..++ ....|.+ +..+.+++.+.+..... . ....+.. ++++++.+.. +.
T Consensus 259 ~~~~~-----~~~l~~~-----~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~------------ 315 (662)
T 3azo_A 259 TDRTG-----WWNLHRV-----DPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GA------------ 315 (662)
T ss_dssp ECTTS-----SCEEEEE-----CTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SS------------
T ss_pred ECCCC-----CeEEEEE-----ECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-Cc------------
Confidence 54432 1122222 24567777664322111 0 1123333 6777777655 32
Q ss_pred ccccceecCcEEeeC-CCCCeEECCCCCCCCCcceeEE-EEECCEEEEEcCCCCCCCcceeeEEeeeEEEeecCccceee
Q 016413 307 SRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHIECAW-VIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLVIIY 384 (390)
Q Consensus 307 ~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~~~~~~~~-~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 384 (390)
..+|.+| .+.+.+.+..- .... ..+ ..-++.+++..+... ...++|.+|+++.+...
T Consensus 316 --------~~l~~~d~~~~~~~~l~~~---~~~~-~~~~s~~~~~~~~~~~~~~---------~~~~i~~~d~~~g~~~~ 374 (662)
T 3azo_A 316 --------AVLGILDPESGELVDAAGP---WTEW-AATLTVSGTRAVGVAASPR---------TAYEVVELDTVTGRART 374 (662)
T ss_dssp --------CEEEEEETTTTEEEECCSS---CCEE-EEEEEEETTEEEEEEEETT---------EEEEEEEEETTTCCEEE
T ss_pred --------cEEEEEECCCCcEEEecCC---CCeE-EEEEecCCCEEEEEEcCCC---------CCCEEEEEECCCCceEE
Confidence 2488888 55666665422 1111 122 334566666544322 22368889988877766
Q ss_pred cc
Q 016413 385 HY 386 (390)
Q Consensus 385 v~ 386 (390)
+.
T Consensus 375 l~ 376 (662)
T 3azo_A 375 IG 376 (662)
T ss_dssp EE
T ss_pred ee
Confidence 53
No 119
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=93.35 E-value=5.8 Score=39.41 Aligned_cols=65 Identities=15% Similarity=0.052 Sum_probs=36.0
Q ss_pred CeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCCC-CeEeCC
Q 016413 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETR-KWDSIP 213 (390)
Q Consensus 145 ~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~-~W~~~~ 213 (390)
..++++|+.+.+-..+...... ...-..++. -+++..+++..+... ....++.+|+.+. ..+.+.
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~---~~~~v~~~d~~~g~~~~~~~ 301 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPK-EKFLTNLSWSPDENILYVAEVNRAQ---NECKVNAYDAETGRFVRTLF 301 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCT-TCEEEEEEECTTSSEEEEEEECTTS---CEEEEEEEETTTCCEEEEEE
T ss_pred eEEEEEECCCCceEeeccCCCC-ceeEeeEEEECCCCEEEEEEeCCCC---CeeEEEEEECCCCceeeEEE
Confidence 5699999998876555432111 112122232 255544444443322 2568999999887 665553
No 120
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=93.34 E-value=1.7 Score=38.04 Aligned_cols=88 Identities=11% Similarity=0.098 Sum_probs=47.3
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCc--eeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (390)
.+++++.|..+ ..+..+|+++.+ |+.-..-. ...+...+.-+++|++.+ ...+..||+.
T Consensus 4 ~~~~lv~~~~~------~~v~~~d~~tG~~~w~~~~~~~---~~~~~~~~~pdG~ilvs~----------~~~V~~~d~~ 64 (276)
T 3no2_A 4 PQHLLVGGSGW------NKIAIINKDTKEIVWEYPLEKG---WECNSVAATKAGEILFSY----------SKGAKMITRD 64 (276)
T ss_dssp CCEEEEECTTC------SEEEEEETTTTEEEEEEECCTT---CCCCEEEECTTSCEEEEC----------BSEEEEECTT
T ss_pred CCcEEEeeCCC------CEEEEEECCCCeEEEEeCCCcc---CCCcCeEECCCCCEEEeC----------CCCEEEECCC
Confidence 45777776544 458889987765 76532211 123334444578888832 2458889983
Q ss_pred CC-CeEeCCCCCCCCCCceEE-EECCEEEEEcc
Q 016413 206 TR-KWDSIPPLPSPRYSPATQ-LWRGRLHVMGG 236 (390)
Q Consensus 206 ~~-~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG 236 (390)
.+ .|+.-.+. ....+++. ..++++++...
T Consensus 65 G~~~W~~~~~~--~~~~~~~~~~~dG~~lv~~~ 95 (276)
T 3no2_A 65 GRELWNIAAPA--GCEMQTARILPDGNALVAWC 95 (276)
T ss_dssp SCEEEEEECCT--TCEEEEEEECTTSCEEEEEE
T ss_pred CCEEEEEcCCC--CccccccEECCCCCEEEEec
Confidence 22 37654421 11122333 33566666543
No 121
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=93.33 E-value=2.1 Score=39.26 Aligned_cols=131 Identities=13% Similarity=0.142 Sum_probs=64.1
Q ss_pred hcccccccCCCCeEECCCCCCcCCCceEEEE-CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEE
Q 016413 97 ATFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV 175 (390)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~ 175 (390)
..+..++..+.+............-.+++.. ++.++++|+.++ .+.+||+.+.+-... +.. .......+
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg------~i~iwd~~~~~~~~~--~~~--~~~~v~~~ 182 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNG------LVDIYDVESQTKLRT--MAG--HQARVGCL 182 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEE--ECC--CSSCEEEE
T ss_pred CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCC------eEEEEECcCCeEEEE--ecC--CCCceEEE
Confidence 3577777766665443322211111222222 566777777653 488899887764332 111 11122223
Q ss_pred EeCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEe
Q 016413 176 SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 176 ~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
..++.+++.|+. -..+..||.....-. +..+.........+.+ ++.+++.|+.+ ..+..|++
T Consensus 183 ~~~~~~l~~~~~--------dg~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~ 246 (401)
T 4aez_A 183 SWNRHVLSSGSR--------SGAIHHHDVRIANHQ-IGTLQGHSSEVCGLAWRSDGLQLASGGND-----NVVQIWDA 246 (401)
T ss_dssp EEETTEEEEEET--------TSEEEEEETTSSSCE-EEEEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEET
T ss_pred EECCCEEEEEcC--------CCCEEEEecccCcce-eeEEcCCCCCeeEEEEcCCCCEEEEEeCC-----CeEEEccC
Confidence 335567777764 345788888743211 1111111111122222 56677777654 35677775
No 122
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=93.02 E-value=0.51 Score=42.72 Aligned_cols=111 Identities=14% Similarity=0.062 Sum_probs=51.4
Q ss_pred EEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-CCEEEEEeceeCCCCCCCCceEEEEECCCCCe
Q 016413 131 FYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKW 209 (390)
Q Consensus 131 lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W 209 (390)
.+.+|.+.......-.++.+|+.+.+.+.+..... ....+.+..- +..||+.+...... ..-.++.+|..+.+.
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~--~~p~~l~~spdg~~l~~~~~~~~~~---~~v~~~~~~~~~g~~ 89 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEV--ANPSYLIPSADGKFVYSVNEFSKDQ---AAVSAFAFDKEKGTL 89 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEEC--SCCCSEEECTTSSEEEEEECCSSTT---CEEEEEEEETTTTEE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccC--CCCceEEECCCCCEEEEEEccCCCC---CcEEEEEEeCCCCcE
Confidence 44556665433212246667888888877654411 1212222222 44577765421110 122345556655667
Q ss_pred EeCCCCCCCCCC-ceEEEECCEEEEEccCCCCCCCCCcceEEe
Q 016413 210 DSIPPLPSPRYS-PATQLWRGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 210 ~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
+.+...+..... ..++.-++.||+.... ...+..|++
T Consensus 90 ~~~~~~~~~~~~p~~~~~dg~~l~~~~~~-----~~~v~~~~~ 127 (361)
T 3scy_A 90 HLLNTQKTMGADPCYLTTNGKNIVTANYS-----GGSITVFPI 127 (361)
T ss_dssp EEEEEEECSSSCEEEEEECSSEEEEEETT-----TTEEEEEEB
T ss_pred EEeeEeccCCCCcEEEEECCCEEEEEECC-----CCEEEEEEe
Confidence 666544322222 2233333446665432 234556664
No 123
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=93.00 E-value=0.45 Score=43.04 Aligned_cols=97 Identities=9% Similarity=0.145 Sum_probs=48.2
Q ss_pred CCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCC-CCceEEEE--CCEEEEEccCCCCCCCCCcceEEeeee
Q 016413 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPR-YSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVK 254 (390)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~ 254 (390)
++++++.||.++ .+.+||..+..|.....+..+. .....+.. ++++++.|+.+ ..+..|++
T Consensus 27 ~g~~las~~~D~--------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D-----~~v~iw~~--- 90 (345)
T 3fm0_A 27 AGTLLASCGGDR--------RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD-----ATTCIWKK--- 90 (345)
T ss_dssp TSSCEEEEETTS--------CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEE---
T ss_pred CCCEEEEEcCCC--------eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC-----CcEEEEEc---
Confidence 667777777543 3667777777765332221111 11112222 56677777654 35677774
Q ss_pred ccccccCCeEEccCCCCCCCceeEEEE--CCEEEEEcCCCCC
Q 016413 255 DGKALEKAWRTEIPIPRGGPHRACFVF--NDRLFVVGGQEGD 294 (390)
Q Consensus 255 ~~~~~~~~W~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~ 294 (390)
.+..+..+..+......-.++.. ++++++.|+.++.
T Consensus 91 ----~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~ 128 (345)
T 3fm0_A 91 ----NQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKS 128 (345)
T ss_dssp ----CCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred ----cCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCe
Confidence 34444433332211111122222 5677888887653
No 124
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=92.96 E-value=1.5 Score=39.80 Aligned_cols=106 Identities=10% Similarity=-0.043 Sum_probs=54.3
Q ss_pred ECCEEEEEecCCCCCCCCCeEEEEeCCCCc----eeecCCCCCCCCCcceEEEE-eC----C---EEEEEeceeCCCCCC
Q 016413 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNK----WVDRFDMPKDMAHSHLGVVS-DG----R---YIYIVSGQYGPQCRG 194 (390)
Q Consensus 127 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~----W~~~~~l~~~~~r~~~~~~~-~~----~---~iyv~GG~~~~~~~~ 194 (390)
+...+++.|+.++ .+.+||..+.+ +..+..+... ...-.+++. -+ + .+++.|+.+
T Consensus 24 ~~~~~l~s~~~dg------~i~iw~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~g~~~~~l~s~~~d------ 90 (397)
T 1sq9_A 24 ACNSFTVSCSGDG------YLKVWDNKLLDNENPKDKSYSHFVH-KSGLHHVDVLQAIERDAFELCLVATTSFS------ 90 (397)
T ss_dssp ECSSEEEEEETTS------EEEEEESBCCTTCCGGGGEEEEECC-TTCEEEEEEEEEEETTTEEEEEEEEEETT------
T ss_pred ecCCeEEEEcCCC------EEEEEECCCcccccCCCcceEEecC-CCcEEEEEEecccccCCccccEEEEEcCC------
Confidence 3446777777663 58888887765 2222211111 111222232 33 6 777777643
Q ss_pred CCceEEEEECCCCC------eEeCCCCCCC---CCCceEEEE-----CCEE-EEEccCCCCCCCCCcceEEee
Q 016413 195 PTSRTFVLDSETRK------WDSIPPLPSP---RYSPATQLW-----RGRL-HVMGGSKENRHTPGLEHWSIA 252 (390)
Q Consensus 195 ~~~~v~~yd~~~~~------W~~~~~~p~~---r~~~~~~~~-----~~~i-yv~GG~~~~~~~~~~~~~~~~ 252 (390)
..+.+||..+.. +..+...+.. ..-.++... ++.. ++.|+.+ ..+..|++.
T Consensus 91 --g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~ 156 (397)
T 1sq9_A 91 --GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-----GTTYIWKFH 156 (397)
T ss_dssp --SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-----SCEEEEEEE
T ss_pred --CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----CcEEEEeCC
Confidence 346777776665 6665543211 112223333 4555 7777654 357778763
No 125
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=92.86 E-value=5 Score=35.79 Aligned_cols=65 Identities=8% Similarity=0.071 Sum_probs=38.7
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
++.+++.|+.++ .+..||+.+.+-..+...... ..-.+++. -++.+++.|+.+ ..+..||..+
T Consensus 138 ~~~~l~s~s~dg------~i~~wd~~~~~~~~~~~~~~~--~~i~~~~~~pdg~~lasg~~d--------g~i~iwd~~~ 201 (343)
T 3lrv_A 138 NTEYFIWADNRG------TIGFQSYEDDSQYIVHSAKSD--VEYSSGVLHKDSLLLALYSPD--------GILDVYNLSS 201 (343)
T ss_dssp -CCEEEEEETTC------CEEEEESSSSCEEEEECCCSS--CCCCEEEECTTSCEEEEECTT--------SCEEEEESSC
T ss_pred CCCEEEEEeCCC------cEEEEECCCCcEEEEEecCCC--CceEEEEECCCCCEEEEEcCC--------CEEEEEECCC
Confidence 456777788664 488899887765433222221 11223333 367788888643 4578899887
Q ss_pred CC
Q 016413 207 RK 208 (390)
Q Consensus 207 ~~ 208 (390)
.+
T Consensus 202 ~~ 203 (343)
T 3lrv_A 202 PD 203 (343)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 126
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.83 E-value=7.5 Score=38.25 Aligned_cols=99 Identities=13% Similarity=0.201 Sum_probs=55.7
Q ss_pred ceEEEECCEEEEEecCCCCCCCCCeEEEEeC-CCC--ceeecCCCCCCC---CC---cceEEEE--eCCE----EEEEec
Q 016413 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNF-TDN--KWVDRFDMPKDM---AH---SHLGVVS--DGRY----IYIVSG 186 (390)
Q Consensus 122 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~-~~~--~W~~~~~l~~~~---~r---~~~~~~~--~~~~----iyv~GG 186 (390)
.+.++.++.||+....+ ..+..+|. .+. .|+.-...+... .+ ...+.++ .+++ ||+...
T Consensus 56 ~tP~v~~g~vyv~~~~~------~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~ 129 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFP------NNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL 129 (599)
T ss_dssp SCCEEETTEEEEECSTT------TCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT
T ss_pred eccEEECCEEEEEeCCC------CEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC
Confidence 44567799999986531 34889998 665 487644332100 01 1123455 5776 877532
Q ss_pred eeCCCCCCCCceEEEEECCCCC--eEeCCCCCC-C-CCCceEEEECCEEEEEc
Q 016413 187 QYGPQCRGPTSRTFVLDSETRK--WDSIPPLPS-P-RYSPATQLWRGRLHVMG 235 (390)
Q Consensus 187 ~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~p~-~-r~~~~~~~~~~~iyv~G 235 (390)
...+..+|.++.+ |+.-..-+. . ....+-++.++.||+-.
T Consensus 130 ---------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~ 173 (599)
T 1w6s_A 130 ---------DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGS 173 (599)
T ss_dssp ---------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECC
T ss_pred ---------CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEe
Confidence 3568889987654 875322111 1 11223356788887654
No 127
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=92.68 E-value=2.3 Score=38.39 Aligned_cols=21 Identities=19% Similarity=0.237 Sum_probs=14.3
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTD 154 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~ 154 (390)
++..++.||.++ .+.+|+...
T Consensus 117 ~g~~lasg~~d~------~i~v~~~~~ 137 (354)
T 2pbi_B 117 SGCAIACGGLDN------KCSVYPLTF 137 (354)
T ss_dssp TSSEEEEESTTS------EEEEEECCC
T ss_pred CCCEEEEeeCCC------CEEEEEEec
Confidence 567888888764 466776654
No 128
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=92.64 E-value=4.5 Score=36.54 Aligned_cols=28 Identities=11% Similarity=-0.025 Sum_probs=17.1
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDN 155 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~ 155 (390)
++++++.|+.+.....-..++.|+..+.
T Consensus 53 DG~~las~s~d~~~~wd~~v~~~~~~~~ 80 (357)
T 4g56_B 53 DGALLLAASSLSSRTWGGSIWVFKDPEG 80 (357)
T ss_dssp SSCEEEEEECSSSSSCCEEEEEESSCC-
T ss_pred CCCEEEEEcCCCCccccCeEEEEECCCC
Confidence 7788888886643222235777776554
No 129
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=92.58 E-value=2.8 Score=36.36 Aligned_cols=102 Identities=8% Similarity=0.014 Sum_probs=48.7
Q ss_pred ECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEE-EeCCEEEEEeceeCCCCCCCCceEEEEECC
Q 016413 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV-SDGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 127 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (390)
.++..++.|+.++ .+.+||+.+..-...-.... ..-.+++ .-++.+++.|+.++ .+..|+..
T Consensus 27 ~~~~~l~s~~~dg------~v~vw~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~dg--------~i~~~~~~ 89 (313)
T 3odt_A 27 VDDSKVASVSRDG------TVRLWSKDDQWLGTVVYTGQ---GFLNSVCYDSEKELLLFGGKDT--------MINGVPLF 89 (313)
T ss_dssp EETTEEEEEETTS------EEEEEEESSSEEEEEEEECS---SCEEEEEEETTTTEEEEEETTS--------CEEEEETT
T ss_pred cCCCEEEEEEcCC------cEEEEECCCCEEEEEeecCC---ccEEEEEECCCCCEEEEecCCC--------eEEEEEee
Confidence 4566677777653 48888887665433211111 1122223 23566777776433 35566654
Q ss_pred CCC-eEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEE
Q 016413 206 TRK-WDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWS 250 (390)
Q Consensus 206 ~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 250 (390)
... .+.+..+.........+..++.+++.|+.+ ..+..|+
T Consensus 90 ~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d-----~~i~~~d 130 (313)
T 3odt_A 90 ATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWD-----KTAKVWK 130 (313)
T ss_dssp CCTTSCC-CEECCCSSCEEEEEEETTEEEEEETT-----SEEEEEE
T ss_pred ecCCCCcccchhhcccCEEEEEecCCEEEEEeCC-----CCEEEEc
Confidence 421 122222222222223334456666666653 2355554
No 130
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=92.55 E-value=2.1 Score=39.64 Aligned_cols=95 Identities=9% Similarity=0.037 Sum_probs=42.8
Q ss_pred eeeeeccCCCceEeecCCCCCccccccceEEEecCCCchhHHHhhhcccccccCCCCeEECCCCCCcCCCceEEEECCEE
Q 016413 52 VASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLF 131 (390)
Q Consensus 52 ~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~~~~l 131 (390)
++..||..+.+-..+-.+... ...-.+++...+.....-...+..+..+|..+.+-.. .+........+...++.+
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~--~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~--~~~~h~~~v~~~s~~~~~ 201 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR--NMTSHSARVGSLSWNSYI 201 (420)
T ss_dssp EEEEEETTTCCEEEEEECCST--TCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE--EECCCSSCEEEEEEETTE
T ss_pred EEEEEECCCCCEEEEEEecCC--CCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE--EEeCCCCceEEEeeCCCE
Confidence 567777777665554333221 0111222222222111111122356666665543221 111111223344557778
Q ss_pred EEEecCCCCCCCCCeEEEEeCCCCc
Q 016413 132 YVFAGYGSLDYVHSHVDVYNFTDNK 156 (390)
Q Consensus 132 yv~GG~~~~~~~~~~v~~yd~~~~~ 156 (390)
++.|+.+. .+..+|..+..
T Consensus 202 l~sgs~d~------~i~~~d~~~~~ 220 (420)
T 4gga_A 202 LSSGSRSG------HIHHHDVRVAE 220 (420)
T ss_dssp EEEEETTS------EEEEEETTSSS
T ss_pred EEEEeCCC------ceeEeeecccc
Confidence 88887663 46777766544
No 131
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=92.52 E-value=1.6 Score=38.61 Aligned_cols=101 Identities=9% Similarity=0.052 Sum_probs=52.2
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCc----eeecCCCCCCCCCcceEEEE-eCCE-EEEEeceeCCCCCCCCceEEE
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK----WVDRFDMPKDMAHSHLGVVS-DGRY-IYIVSGQYGPQCRGPTSRTFV 201 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~----W~~~~~l~~~~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~v~~ 201 (390)
++.+++.|+.++ .+.+||..+.. -..+.... ..-.+++. -++. +++.|+.+ ..+.+
T Consensus 22 ~~~~l~~~~~d~------~v~iw~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~l~~~~~d--------g~i~~ 83 (342)
T 1yfq_A 22 SKSLLLITSWDG------SLTVYKFDIQAKNVDLLQSLRYK----HPLLCCNFIDNTDLQIYVGTVQ--------GEILK 83 (342)
T ss_dssp GGTEEEEEETTS------EEEEEEEETTTTEEEEEEEEECS----SCEEEEEEEESSSEEEEEEETT--------SCEEE
T ss_pred CCCEEEEEcCCC------eEEEEEeCCCCccccceeeeecC----CceEEEEECCCCCcEEEEEcCC--------CeEEE
Confidence 456667776553 47777776655 32222111 11222332 3566 66777643 45888
Q ss_pred EEC-CCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEe
Q 016413 202 LDS-ETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 202 yd~-~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
||. .+..-..+...+....-.++....+.+++.|+.+ ..+..|++
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~iwd~ 129 (342)
T 1yfq_A 84 VDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD-----GLIEVIDP 129 (342)
T ss_dssp ECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETT-----SEEEEECH
T ss_pred EEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCC-----CeEEEEcc
Confidence 998 8777655543111122223333335556666543 34666764
No 132
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=92.43 E-value=1.5 Score=39.77 Aligned_cols=102 Identities=13% Similarity=0.162 Sum_probs=52.3
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-e-CCEEEEEeceeCCCCCCCCceEEEEECC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-D-GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (390)
+++.++.|+.++ .+.++|+.+++-.. .+... ...-.+++. . +..+++.|+.+ ..+.+||..
T Consensus 138 dg~~l~sgs~d~------~i~iwd~~~~~~~~--~~~~h-~~~V~~~~~~~~~~~~l~s~s~D--------~~v~iwd~~ 200 (344)
T 4gqb_B 138 SGTQAVSGSKDI------CIKVWDLAQQVVLS--SYRAH-AAQVTCVAASPHKDSVFLSCSED--------NRILLWDTR 200 (344)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEE--EECCC-SSCEEEEEECSSCTTEEEEEETT--------SCEEEEETT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEE--EEcCc-CCceEEEEecCCCCCceeeeccc--------ccccccccc
Confidence 567788888764 48889988765322 22211 011122232 2 33577777654 347788988
Q ss_pred CCCeEeCCCCCCCCCCc-eEEEE--CCEEEEEccCCCCCCCCCcceEEe
Q 016413 206 TRKWDSIPPLPSPRYSP-ATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 206 ~~~W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
+.+-...-......... +++.. ++++++.|+.+ ..+..||+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d-----g~v~~wd~ 244 (344)
T 4gqb_B 201 CPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN-----GTVSLVDT 244 (344)
T ss_dssp SSSCEEECC----CCCEEEEEECSSCTTEEEEEETT-----SEEEEEES
T ss_pred ccceeeeeecceeeccceeeeecCCCCcceEEeccC-----CcEEEEEC
Confidence 76533221111111111 22222 45677777654 34677774
No 133
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=92.42 E-value=0.52 Score=42.25 Aligned_cols=101 Identities=11% Similarity=0.099 Sum_probs=52.3
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe--CCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
+.+++.|+.++ .+.+||+.+.+-... +... ...-.++... ++.+++.|+.+ ..+..||..+
T Consensus 85 ~~~l~~~~~dg------~i~v~d~~~~~~~~~--~~~~-~~~i~~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~ 147 (366)
T 3k26_A 85 HPLLAVAGSRG------IIRIINPITMQCIKH--YVGH-GNAINELKFHPRDPNLLLSVSKD--------HALRLWNIQT 147 (366)
T ss_dssp CEEEEEEETTC------EEEEECTTTCCEEEE--EESC-CSCEEEEEECSSCTTEEEEEETT--------SCEEEEETTT
T ss_pred CCEEEEecCCC------EEEEEEchhceEeee--ecCC-CCcEEEEEECCCCCCEEEEEeCC--------CeEEEEEeec
Confidence 57888888763 588899876653221 1110 1112233332 56777777643 3478899887
Q ss_pred CCeEeC-CCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEe
Q 016413 207 RKWDSI-PPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 207 ~~W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
.+-... ..+.........+.+ ++..++.|+.+ ..+..|++
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~ 190 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD-----HSLKLWRI 190 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEES
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCC-----CCEEEEEC
Confidence 653322 111212222222222 45566666653 35666765
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.41 E-value=2.5 Score=39.26 Aligned_cols=187 Identities=8% Similarity=-0.016 Sum_probs=89.7
Q ss_pred CeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCce
Q 016413 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPA 223 (390)
Q Consensus 145 ~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~ 223 (390)
..++++|..+..-..+..-.. . -.+.+. -+++.+++++.+.. ...++++|+.+.+...+...+. ...+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~---~-v~~~~~Spdg~~la~~s~~~~-----~~~i~~~d~~tg~~~~l~~~~~--~~~~ 227 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQ---P-LMSPAWSPDGSKLAYVTFESG-----RSALVIQTLANGAVRQVASFPR--HNGA 227 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESS---C-EEEEEECTTSSEEEEEECTTS-----SCEEEEEETTTCCEEEEECCSS--CEEE
T ss_pred ceEEEEcCCCCCCEEEeCCCC---c-ceeeEEcCCCCEEEEEEecCC-----CcEEEEEECCCCcEEEeecCCC--cccC
Confidence 568999987655444322111 1 222222 25555566554321 3679999999888766544322 1112
Q ss_pred EEEE-CC-EEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeEEEE--CCEEEEEcCCCCCCCCCC
Q 016413 224 TQLW-RG-RLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF--NDRLFVVGGQEGDFMAKP 299 (390)
Q Consensus 224 ~~~~-~~-~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~ 299 (390)
.+.. ++ .|++.+..++ ...+..|+ ..+.+...+...+.. ...... +++.+++++....
T Consensus 228 ~~~spdg~~la~~~~~~g---~~~i~~~d-------~~~~~~~~l~~~~~~---~~~~~~spdg~~l~~~s~~~g----- 289 (415)
T 2hqs_A 228 PAFSPDGSKLAFALSKTG---SLNLYVMD-------LASGQIRQVTDGRSN---NTEPTWFPDSQNLAFTSDQAG----- 289 (415)
T ss_dssp EEECTTSSEEEEEECTTS---SCEEEEEE-------TTTCCEEECCCCSSC---EEEEEECTTSSEEEEEECTTS-----
T ss_pred EEEcCCCCEEEEEEecCC---CceEEEEE-------CCCCCEEeCcCCCCc---ccceEECCCCCEEEEEECCCC-----
Confidence 2222 34 4554543322 12345555 345555444332211 122222 5554455443211
Q ss_pred CCCccccccccceecCcEEeeC-CCCCeEECCCCCCCCCcceeEEEEECCEEEEEcCCCCCCCcceeeEEeeeEEEeecC
Q 016413 300 GSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLD 378 (390)
Q Consensus 300 ~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~ 378 (390)
...++.+| .+.+-..+.... ..........+++.+++++.+... ..++++|++
T Consensus 290 --------------~~~i~~~d~~~~~~~~l~~~~---~~~~~~~~spdG~~l~~~~~~~g~---------~~i~~~d~~ 343 (415)
T 2hqs_A 290 --------------RPQVYKVNINGGAPQRITWEG---SQNQDADVSSDGKFMVMVSSNGGQ---------QHIAKQDLA 343 (415)
T ss_dssp --------------SCEEEEEETTSSCCEECCCSS---SEEEEEEECTTSSEEEEEEECSSC---------EEEEEEETT
T ss_pred --------------CcEEEEEECCCCCEEEEecCC---CcccCeEECCCCCEEEEEECcCCc---------eEEEEEECC
Confidence 12488888 555544443211 111111122366666665543221 258899988
Q ss_pred ccceeecc
Q 016413 379 SLVIIYHY 386 (390)
Q Consensus 379 ~~~W~~v~ 386 (390)
+.+...+.
T Consensus 344 ~~~~~~l~ 351 (415)
T 2hqs_A 344 TGGVQVLS 351 (415)
T ss_dssp TCCEEECC
T ss_pred CCCEEEec
Confidence 87765543
No 135
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.38 E-value=1.5 Score=44.52 Aligned_cols=101 Identities=9% Similarity=0.146 Sum_probs=50.5
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
+++.+++|+.+ ..+.+||..+.+....-.... ..-.+++. -++..++.|+. -..+.+||..+
T Consensus 66 ~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~--------dg~i~vw~~~~ 128 (814)
T 3mkq_A 66 RKNWIIVGSDD------FRIRVFNYNTGEKVVDFEAHP---DYIRSIAVHPTKPYVLSGSD--------DLTVKLWNWEN 128 (814)
T ss_dssp GGTEEEEEETT------SEEEEEETTTCCEEEEEECCS---SCEEEEEECSSSSEEEEEET--------TSEEEEEEGGG
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEecCC---CCEEEEEEeCCCCEEEEEcC--------CCEEEEEECCC
Confidence 55677777764 358899988776543211111 11222232 24555556653 24577888876
Q ss_pred CCeEeCCCCCCCCC-CceEEEE--CCEEEEEccCCCCCCCCCcceEEe
Q 016413 207 RKWDSIPPLPSPRY-SPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 207 ~~W~~~~~~p~~r~-~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
. |.....+..... -.+++.. ++.+++.|+.+ ..+..|++
T Consensus 129 ~-~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----g~v~vwd~ 170 (814)
T 3mkq_A 129 N-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD-----RTVKVWSL 170 (814)
T ss_dssp T-SEEEEEEECCSSCEEEEEEETTEEEEEEEEETT-----SEEEEEET
T ss_pred C-ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC-----CeEEEEEC
Confidence 5 222221111111 1222333 45677777654 34666764
No 136
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=92.30 E-value=2.6 Score=39.40 Aligned_cols=65 Identities=15% Similarity=0.286 Sum_probs=36.6
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCCC
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK 208 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 208 (390)
+++++.|+.++ .+.+||+.+.+-...-..... .. -.+++..++.+++.|+.+ ..+.+||..+.+
T Consensus 210 ~~~l~s~~~d~------~i~vwd~~~~~~~~~~~~~h~-~~-v~~~~~sd~~~l~s~~~d--------~~v~vwd~~~~~ 273 (450)
T 2vdu_B 210 HQFIITSDRDE------HIKISHYPQCFIVDKWLFGHK-HF-VSSICCGKDYLLLSAGGD--------DKIFAWDWKTGK 273 (450)
T ss_dssp CEEEEEEETTS------CEEEEEESCTTCEEEECCCCS-SC-EEEEEECSTTEEEEEESS--------SEEEEEETTTCC
T ss_pred CcEEEEEcCCC------cEEEEECCCCceeeeeecCCC-Cc-eEEEEECCCCEEEEEeCC--------CeEEEEECCCCc
Confidence 77888888763 488888876653321010110 11 112222267777777632 468888888765
Q ss_pred e
Q 016413 209 W 209 (390)
Q Consensus 209 W 209 (390)
-
T Consensus 274 ~ 274 (450)
T 2vdu_B 274 N 274 (450)
T ss_dssp E
T ss_pred E
Confidence 3
No 137
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.07 E-value=7.1 Score=39.38 Aligned_cols=103 Identities=9% Similarity=0.092 Sum_probs=49.3
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe--CCEEEEEeceeCCCCCCCCceEEEEECC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (390)
++..++.|+.++ .+.+||..++ |.....+... ...-.+++.. ++.+++.|+.+ ..+.+||..
T Consensus 108 ~~~~l~~~~~dg------~i~vw~~~~~-~~~~~~~~~~-~~~v~~~~~~p~~~~~l~~~~~d--------g~v~vwd~~ 171 (814)
T 3mkq_A 108 TKPYVLSGSDDL------TVKLWNWENN-WALEQTFEGH-EHFVMCVAFNPKDPSTFASGCLD--------RTVKVWSLG 171 (814)
T ss_dssp SSSEEEEEETTS------EEEEEEGGGT-SEEEEEEECC-SSCEEEEEEETTEEEEEEEEETT--------SEEEEEETT
T ss_pred CCCEEEEEcCCC------EEEEEECCCC-ceEEEEEcCC-CCcEEEEEEEcCCCCEEEEEeCC--------CeEEEEECC
Confidence 455666776553 4888888765 2222111110 1112233333 46677777643 457888876
Q ss_pred CCCeEeCCCCCCCCCCceEEEE---CCEEEEEccCCCCCCCCCcceEEe
Q 016413 206 TRKWDSIPPLPSPRYSPATQLW---RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 206 ~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
+..-...........-..++.. ++.+++.|+.+ ..+..|++
T Consensus 172 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~i~~~d~ 215 (814)
T 3mkq_A 172 QSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD-----LTIKIWDY 215 (814)
T ss_dssp CSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT-----SEEEEEET
T ss_pred CCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC-----CEEEEEEC
Confidence 5432111111111112222222 56677777653 24666663
No 138
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=91.93 E-value=2.4 Score=37.27 Aligned_cols=101 Identities=12% Similarity=0.151 Sum_probs=51.2
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (390)
++.+++.|+.++ .+..+|..+..-...-.... ..........++.+++.|+.+ ..+.+||..+.
T Consensus 24 ~~~~l~s~~~dg------~v~lWd~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~s~d--------~~i~vwd~~~~ 87 (304)
T 2ynn_A 24 TEPWVLTTLYSG------RVELWNYETQVEVRSIQVTE--TPVRAGKFIARKNWIIVGSDD--------FRIRVFNYNTG 87 (304)
T ss_dssp SSSEEEEEETTS------EEEEEETTTTEEEEEEECCS--SCEEEEEEEGGGTEEEEEETT--------SEEEEEETTTC
T ss_pred CCCEEEEEcCCC------cEEEEECCCCceeEEeeccC--CcEEEEEEeCCCCEEEEECCC--------CEEEEEECCCC
Confidence 566777787663 48888988765432111111 111222223355666777643 45778888775
Q ss_pred CeEeCCCCCCCCCC-ceEEEE-CCEEEEEccCCCCCCCCCcceEEe
Q 016413 208 KWDSIPPLPSPRYS-PATQLW-RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 208 ~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
+-.. .+...... .+++.. ++.+++.|+.+ ..+..|++
T Consensus 88 ~~~~--~~~~h~~~v~~~~~~~~~~~l~sgs~D-----~~v~lWd~ 126 (304)
T 2ynn_A 88 EKVV--DFEAHPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNW 126 (304)
T ss_dssp CEEE--EEECCSSCEEEEEECSSSSEEEEEETT-----SCEEEEEG
T ss_pred cEEE--EEeCCCCcEEEEEEcCCCCEEEEECCC-----CeEEEEEC
Confidence 4211 11111111 122222 45566666653 45778875
No 139
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=91.75 E-value=8.1 Score=38.60 Aligned_cols=244 Identities=11% Similarity=0.074 Sum_probs=112.1
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEECCEEEEEecCCCC-------CCCCCeEEEEeCCCCce--eecCCCCC-CC
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSL-------DYVHSHVDVYNFTDNKW--VDRFDMPK-DM 167 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~-------~~~~~~v~~yd~~~~~W--~~~~~l~~-~~ 167 (390)
.++.+|..+.+.... .++..+....+-. +++-+++.-.+.. .....+|+++++.+..= ..+...+. .
T Consensus 156 ~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~- 232 (693)
T 3iuj_A 156 EIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ- 232 (693)
T ss_dssp EEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGG-
T ss_pred EEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCC-
Confidence 677778777775443 1121122222333 6654444433321 01235689998877653 12222221 0
Q ss_pred CCcceEEE-EeCCEEEEEeceeCCCCCCCCceEEEEECCCC--CeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCC
Q 016413 168 AHSHLGVV-SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR--KWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTP 244 (390)
Q Consensus 168 ~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 244 (390)
.....++. .-+++..++....+. ..++++.+|..+. .|+.+.+-..... ......++.||+....+.. ..
T Consensus 233 ~~~~~~~~~SpDg~~l~~~~~~~~----~~~~i~~~d~~~~~~~~~~l~~~~~~~~-~~~~~~g~~l~~~t~~~~~--~~ 305 (693)
T 3iuj_A 233 HHRYVGATVTEDDRFLLISAANST----SGNRLYVKDLSQENAPLLTVQGDLDADV-SLVDNKGSTLYLLTNRDAP--NR 305 (693)
T ss_dssp CCSEEEEEECTTSCEEEEEEESSS----SCCEEEEEETTSTTCCCEEEECSSSSCE-EEEEEETTEEEEEECTTCT--TC
T ss_pred CeEEEEEEEcCCCCEEEEEEccCC----CCcEEEEEECCCCCCceEEEeCCCCceE-EEEeccCCEEEEEECCCCC--CC
Confidence 11122222 334544333322221 1368999998765 6777654222111 1234568899988654321 12
Q ss_pred CcceEEeeeeccccccCCeEEccCCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CC
Q 016413 245 GLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DE 323 (390)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~ 323 (390)
.+..+++. . +....|+.+.+-..... +....++.|++..-.++ ...++++| .+
T Consensus 306 ~l~~~d~~--~--~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g--------------------~~~l~~~d~~g 359 (693)
T 3iuj_A 306 RLVTVDAA--N--PGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDA--------------------TARVEQFDYEG 359 (693)
T ss_dssp EEEEEETT--S--CCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETT--------------------EEEEEEECTTS
T ss_pred EEEEEeCC--C--CCccccEEEecCCCCEE--EEEEECCEEEEEEEECC--------------------eeEEEEEECCC
Confidence 23333321 1 12345887654332222 45556677665543322 12488888 54
Q ss_pred CCeEECCCCCCCCCcceeEEEEECC-EEEEEcCCCCCCCcceeeEEeeeEEEeecCccceeeccCC
Q 016413 324 MKWKVLPPMPKPNSHIECAWVIVNN-SIIITGGTTEKHPMTKRMILVGEVFQFHLDSLVIIYHYRP 388 (390)
Q Consensus 324 ~~W~~~~~~~~~~~~~~~~~~~~~~-~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~ 388 (390)
.....+ .+|....-...+ ...++ .+++. ..+...+ .+++.||+++++...+...
T Consensus 360 ~~~~~l-~~p~~~~~~~~~-~~~d~~~l~~~-~ss~~tP--------~~l~~~d~~~g~~~~l~~~ 414 (693)
T 3iuj_A 360 KRVREV-ALPGLGSVSGFN-GKHDDPALYFG-FENYAQP--------PTLYRFEPKSGAISLYRAS 414 (693)
T ss_dssp CEEEEE-CCSSSSEEEECC-CCTTCSCEEEE-EECSSSC--------CEEEEECTTTCCEEEEECC
T ss_pred CeeEEe-ecCCCceEEeee-cCCCCCEEEEE-ecCCCCC--------CEEEEEECCCCeEEEEEeC
Confidence 443443 233221100000 01123 33332 2221211 2689999988877766543
No 140
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=91.67 E-value=3.2 Score=44.52 Aligned_cols=135 Identities=9% Similarity=0.004 Sum_probs=66.5
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (390)
+++.++.|+.++ .+.+||..+.+...+..... .-.+++...+..++.|+. -..+..||..+.
T Consensus 1014 dg~~l~s~~~dg------~i~vwd~~~~~~~~~~~~~~----~v~~~~~~~~~~l~~~~~--------dg~v~vwd~~~~ 1075 (1249)
T 3sfz_A 1014 DGKTLISSSEDS------VIQVWNWQTGDYVFLQAHQE----TVKDFRLLQDSRLLSWSF--------DGTVKVWNVITG 1075 (1249)
T ss_dssp SSSCEEEECSSS------BEEEEETTTTEEECCBCCSS----CEEEEEECSSSEEEEEES--------SSEEEEEETTTT
T ss_pred CCCEEEEEcCCC------EEEEEECCCCceEEEecCCC----cEEEEEEcCCCcEEEEEC--------CCcEEEEECCCC
Confidence 567777777653 48899999887765433222 222333333334455553 245788888765
Q ss_pred CeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeEE--EECCEE
Q 016413 208 KWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACF--VFNDRL 285 (390)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~--~~~~~i 285 (390)
+-...-..........+..-++++++.|+.+ ..+..|++ .+.+ .+..+......-.++ .-++++
T Consensus 1076 ~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d-----~~v~iwd~-------~~~~--~~~~l~~h~~~v~~~~~s~dg~~ 1141 (1249)
T 3sfz_A 1076 RIERDFTCHQGTVLSCAISSDATKFSSTSAD-----KTAKIWSF-------DLLS--PLHELKGHNGCVRCSAFSLDGIL 1141 (1249)
T ss_dssp CCCEEEECCSSCCCCEEECSSSSSCEEECCS-----SCCCEECS-------SSSS--CSBCCCCCSSCEEEEEECSSSSE
T ss_pred ceeEEEcccCCcEEEEEECCCCCEEEEEcCC-----CcEEEEEC-------CCcc--eeeeeccCCCcEEEEEECCCCCE
Confidence 4221111111111112223355666666653 34667764 2221 222222111111222 236778
Q ss_pred EEEcCCCCC
Q 016413 286 FVVGGQEGD 294 (390)
Q Consensus 286 yv~GG~~~~ 294 (390)
++.|+.++.
T Consensus 1142 lat~~~dg~ 1150 (1249)
T 3sfz_A 1142 LATGDDNGE 1150 (1249)
T ss_dssp EEEEETTSC
T ss_pred EEEEeCCCE
Confidence 888887653
No 141
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=91.53 E-value=2.9 Score=38.66 Aligned_cols=100 Identities=9% Similarity=0.093 Sum_probs=51.6
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
++.+++.|+.++ .+.+||..+.+-... +... ...-.+++. -++.+++.|+.++. +.+||..+
T Consensus 119 ~~~~l~s~s~Dg------~i~vwd~~~~~~~~~--l~~h-~~~V~~v~~~~~~~~l~sgs~D~~--------i~iwd~~~ 181 (410)
T 1vyh_C 119 VFSVMVSASEDA------TIKVWDYETGDFERT--LKGH-TDSVQDISFDHSGKLLASCSADMT--------IKLWDFQG 181 (410)
T ss_dssp SSSEEEEEESSS------CEEEEETTTCCCCEE--ECCC-SSCEEEEEECTTSSEEEEEETTSC--------CCEEETTS
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEE--Eecc-CCcEEEEEEcCCCCEEEEEeCCCe--------EEEEeCCC
Confidence 456888888764 488889887654322 1111 111222333 35677888875543 45677765
Q ss_pred CCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEe
Q 016413 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
..- +..+.........+.+ ++..++.|+.+ ..+..|++
T Consensus 182 ~~~--~~~~~~h~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~ 221 (410)
T 1vyh_C 182 FEC--IRTMHGHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEV 221 (410)
T ss_dssp SCE--EECCCCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEET
T ss_pred Cce--eEEEcCCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEEC
Confidence 432 2222211111222222 45566676653 35677774
No 142
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=91.52 E-value=5.6 Score=39.60 Aligned_cols=102 Identities=15% Similarity=0.055 Sum_probs=48.9
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcce-EEEEe-CC--EEEEEeceeCCCCCCCCceEEEEE
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHL-GVVSD-GR--YIYIVSGQYGPQCRGPTSRTFVLD 203 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~-~~~~~-~~--~iyv~GG~~~~~~~~~~~~v~~yd 203 (390)
+++.++.|+.++ .+.++|.....=..+...... .+... +++.. ++ .+++.|+.+ ..+.+||
T Consensus 483 ~~~~l~s~s~D~------~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~s~d--------~~v~vwd 547 (694)
T 3dm0_A 483 DNRQIVSASRDR------TIKLWNTLGECKYTISEGGEG-HRDWVSCVRFSPNTLQPTIVSASWD--------KTVKVWN 547 (694)
T ss_dssp TSSCEEEEETTS------CEEEECTTSCEEEEECSSTTS-CSSCEEEEEECSCSSSCEEEEEETT--------SCEEEEE
T ss_pred CCCEEEEEeCCC------EEEEEECCCCcceeeccCCCC-CCCcEEEEEEeCCCCcceEEEEeCC--------CeEEEEE
Confidence 566777777663 377778655432222111111 12222 22222 22 356666543 3477888
Q ss_pred CCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEe
Q 016413 204 SETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 204 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
..+.+-... +.........+.+ ++++++.|+.+ ..+..|++
T Consensus 548 ~~~~~~~~~--~~~h~~~v~~v~~spdg~~l~sg~~D-----g~i~iwd~ 590 (694)
T 3dm0_A 548 LSNCKLRST--LAGHTGYVSTVAVSPDGSLCASGGKD-----GVVLLWDL 590 (694)
T ss_dssp TTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SBCEEEET
T ss_pred CCCCcEEEE--EcCCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEEC
Confidence 876543221 1111111122222 56777777754 35777875
No 143
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=91.46 E-value=0.64 Score=42.37 Aligned_cols=103 Identities=12% Similarity=0.111 Sum_probs=51.4
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCC----------CCCCCCcceEEEEe--CCEEEEEeceeCCCCCCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDM----------PKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGP 195 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l----------~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 195 (390)
++.+++.|+.++ .+.+||..+......... +......-.+++.. ++.+++.|+.+
T Consensus 55 ~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d------- 121 (408)
T 4a11_B 55 EGRYMLSGGSDG------VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD------- 121 (408)
T ss_dssp TCCEEEEEETTS------CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT-------
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC-------
Confidence 567888888764 488888877654322110 00001112223322 45567777642
Q ss_pred CceEEEEECCCCCeEeCCCCCCCCCCceEEEE----CCEEEEEccCCCCCCCCCcceEEe
Q 016413 196 TSRTFVLDSETRKWDSIPPLPSPRYSPATQLW----RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 196 ~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
..+..||..+..-...-..+.+. .+.... ++.+++.|+.+ ..+..|++
T Consensus 122 -~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-----~~v~~~d~ 173 (408)
T 4a11_B 122 -KTLKVWDTNTLQTADVFNFEETV--YSHHMSPVSTKHCLVAVGTRG-----PKVQLCDL 173 (408)
T ss_dssp -SEEEEEETTTTEEEEEEECSSCE--EEEEECSSCSSCCEEEEEESS-----SSEEEEES
T ss_pred -CeEEEeeCCCCccceeccCCCce--eeeEeecCCCCCcEEEEEcCC-----CeEEEEeC
Confidence 45788888876543332222211 111111 33466666653 35667764
No 144
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=91.42 E-value=0.9 Score=40.63 Aligned_cols=23 Identities=13% Similarity=0.228 Sum_probs=15.9
Q ss_pred CCEEEEEcCCCCCCCcceeeEEeeeEEEeecCccc
Q 016413 347 NNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLV 381 (390)
Q Consensus 347 ~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 381 (390)
++++++.|+.++. |.+||+++..
T Consensus 326 ~~~~l~s~~~dg~------------v~iw~~~~~~ 348 (369)
T 3zwl_B 326 QGTSYASGGEDGF------------IRLHHFEKSY 348 (369)
T ss_dssp TSSEEEEEETTSE------------EEEEEECHHH
T ss_pred CCCEEEEEcCCCe------------EEEEECcccc
Confidence 6778888876543 6777776654
No 145
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=91.37 E-value=6.4 Score=33.83 Aligned_cols=93 Identities=10% Similarity=0.056 Sum_probs=48.5
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
+++|||..... ...+.+||+..+.-..+..... ..-.++++ -++++|+.... ...+.+||+..
T Consensus 88 ~g~l~v~~~~~-----~~~i~~~d~~g~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~~--------~~~i~~~~~~g 151 (286)
T 1q7f_A 88 SGDIIVTERSP-----THQIQIYNQYGQFVRKFGATIL---QHPRGVTVDNKGRIIVVECK--------VMRVIIFDQNG 151 (286)
T ss_dssp TTEEEEEECGG-----GCEEEEECTTSCEEEEECTTTC---SCEEEEEECTTSCEEEEETT--------TTEEEEECTTS
T ss_pred CCeEEEEcCCC-----CCEEEEECCCCcEEEEecCccC---CCceEEEEeCCCCEEEEECC--------CCEEEEEcCCC
Confidence 67899986421 1358899966554433322111 12233444 36788887531 35688999766
Q ss_pred CCeEeCCCCCCCCCCceEEEE-CCEEEEEcc
Q 016413 207 RKWDSIPPLPSPRYSPATQLW-RGRLHVMGG 236 (390)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG 236 (390)
..-..+........-..++.. +++|||...
T Consensus 152 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 152 NVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp CEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred CEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 544443211111111223322 578988754
No 146
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=91.34 E-value=3.1 Score=35.44 Aligned_cols=79 Identities=9% Similarity=0.042 Sum_probs=44.2
Q ss_pred CeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC-CCeEeCCCCCCCCC-C
Q 016413 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET-RKWDSIPPLPSPRY-S 221 (390)
Q Consensus 145 ~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~r~-~ 221 (390)
..++++|+.+++...+...+. . -.+++. -+++.+++++ ...++++|+.+ .+...+........ .
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~~---~-v~~~~~spdg~~l~~~~---------~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTPE---L-FEAPNWSPDGKYLLLNS---------EGLLYRLSLAGDPSPEKVDTGFATICNN 88 (297)
T ss_dssp EEEEEEETTTTEEEEEEEESS---C-CEEEEECTTSSEEEEEE---------TTEEEEEESSSCCSCEECCCTTCCCBCS
T ss_pred eeEEEEeCCCCceeeeccCCc---c-eEeeEECCCCCEEEEEc---------CCeEEEEeCCCCCCceEecccccccccc
Confidence 569999999888765543322 1 222232 3566666653 24689999998 77766654332122 2
Q ss_pred ceEEEECCEEEEEcc
Q 016413 222 PATQLWRGRLHVMGG 236 (390)
Q Consensus 222 ~~~~~~~~~iyv~GG 236 (390)
.....-+++.+++++
T Consensus 89 ~~~~spdg~~l~~~~ 103 (297)
T 2ojh_A 89 DHGISPDGALYAISD 103 (297)
T ss_dssp CCEECTTSSEEEEEE
T ss_pred ceEECCCCCEEEEEE
Confidence 222233555555554
No 147
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=91.29 E-value=13 Score=37.09 Aligned_cols=98 Identities=19% Similarity=0.300 Sum_probs=57.5
Q ss_pred ceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCc--eeecCCCCCCC------CCcceEEEEeCCEEEEEeceeCCCCC
Q 016413 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDM------AHSHLGVVSDGRYIYIVSGQYGPQCR 193 (390)
Q Consensus 122 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~l~~~~------~r~~~~~~~~~~~iyv~GG~~~~~~~ 193 (390)
.+-++.++.||+.... ..+..+|..+.+ |+.-...+... .....+.++.+++||+...
T Consensus 60 ~~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------- 125 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSW-------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------- 125 (668)
T ss_dssp CCCEEETTEEEEEEGG-------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------
T ss_pred cCCEEECCEEEEECCC-------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------
Confidence 3446779999998642 358888887654 87643322110 0012234567888887642
Q ss_pred CCCceEEEEECCCCC--eEeCCCCCC--CCCCceEEEECCEEEEEc
Q 016413 194 GPTSRTFVLDSETRK--WDSIPPLPS--PRYSPATQLWRGRLHVMG 235 (390)
Q Consensus 194 ~~~~~v~~yd~~~~~--W~~~~~~p~--~r~~~~~~~~~~~iyv~G 235 (390)
...+..+|.++.+ |+.-..-+. .....+.++.++.+|+..
T Consensus 126 --dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~ 169 (668)
T 1kv9_A 126 --DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGN 169 (668)
T ss_dssp --TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECC
T ss_pred --CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeC
Confidence 3568899987764 876442111 122234456788888754
No 148
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=91.27 E-value=2.8 Score=37.22 Aligned_cols=61 Identities=3% Similarity=-0.039 Sum_probs=34.2
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (390)
++.+++.|+.++ .+.+||+.+.+-.. .+..+ ....+.......+++.+. ...+..||....
T Consensus 140 ~~~~l~~~~~dg------~i~vwd~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~---------~~~i~~~~~~~~ 200 (368)
T 3mmy_A 140 NYSCVMTGSWDK------TLKFWDTRSSNPMM--VLQLP--ERCYCADVIYPMAVVATA---------ERGLIVYQLENQ 200 (368)
T ss_dssp SCEEEEEEETTS------EEEEECSSCSSCSE--EEECS--SCEEEEEEETTEEEEEEG---------GGCEEEEECSSS
T ss_pred CCCEEEEccCCC------cEEEEECCCCcEEE--EEecC--CCceEEEecCCeeEEEeC---------CCcEEEEEeccc
Confidence 567788888763 48889987664222 22221 223344455665554433 244677777654
No 149
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=91.26 E-value=1.2 Score=39.70 Aligned_cols=98 Identities=8% Similarity=0.005 Sum_probs=52.5
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE---eCCEEEEEeceeCCCCCCCCceEEEEEC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS---DGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (390)
+++.++.|+.++ .+.+||..+.+-..+..... .-.++.. .++.+++.|+.+ ..+..||.
T Consensus 97 ~~~~l~s~~~dg------~v~iwd~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~l~~~~~d--------g~i~vwd~ 158 (368)
T 3mmy_A 97 DGSKVFTASCDK------TAKMWDLSSNQAIQIAQHDA----PVKTIHWIKAPNYSCVMTGSWD--------KTLKFWDT 158 (368)
T ss_dssp TSSEEEEEETTS------EEEEEETTTTEEEEEEECSS----CEEEEEEEECSSCEEEEEEETT--------SEEEEECS
T ss_pred CCCEEEEEcCCC------cEEEEEcCCCCceeeccccC----ceEEEEEEeCCCCCEEEEccCC--------CcEEEEEC
Confidence 566777777653 58899998887655433222 1222332 366777777643 45788888
Q ss_pred CCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEe
Q 016413 205 ETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 205 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
.+.+- +..+..+....+.....+.+++.+.. ..+..|++
T Consensus 159 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~------~~i~~~~~ 197 (368)
T 3mmy_A 159 RSSNP--MMVLQLPERCYCADVIYPMAVVATAE------RGLIVYQL 197 (368)
T ss_dssp SCSSC--SEEEECSSCEEEEEEETTEEEEEEGG------GCEEEEEC
T ss_pred CCCcE--EEEEecCCCceEEEecCCeeEEEeCC------CcEEEEEe
Confidence 76542 11112222233344555655554432 24555654
No 150
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=91.00 E-value=4.4 Score=40.50 Aligned_cols=182 Identities=7% Similarity=0.033 Sum_probs=86.1
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEE-CCEEEEEecCCCCC-------CCCCeEEEEeCCCCcee--ecCCCCCCC
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLD-------YVHSHVDVYNFTDNKWV--DRFDMPKDM 167 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~-~~~lyv~GG~~~~~-------~~~~~v~~yd~~~~~W~--~~~~l~~~~ 167 (390)
.++.+|..+.+......++..+. ..++.. +++.++++..+... ....+++++++.+..-+ .+...+..
T Consensus 148 ~i~v~dl~tg~~~~~~~~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~- 225 (695)
T 2bkl_A 148 VLHVIDVDSGEWSKVDVIEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD- 225 (695)
T ss_dssp EEEEEETTTCCBCSSCCBSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC-
T ss_pred EEEEEECCCCCCcCCcccCcccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC-
Confidence 57777777766531111221111 223332 56666666654421 12356999999887632 33222221
Q ss_pred CCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCc
Q 016413 168 AHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGL 246 (390)
Q Consensus 168 ~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 246 (390)
.....+... -+++..++...+.. ..++++.+|..+..|+.+..-... ....+..++.+|+...... ....+
T Consensus 226 ~~~~~~~~~SpDG~~l~~~~~~~~----~~~~l~~~~~~~~~~~~l~~~~~~--~~~~~~~~g~l~~~s~~~~--~~~~l 297 (695)
T 2bkl_A 226 PTTFLQSDLSRDGKYLFVYILRGW----SENDVYWKRPGEKDFRLLVKGVGA--KYEVHAWKDRFYVLTDEGA--PRQRV 297 (695)
T ss_dssp TTCEEEEEECTTSCCEEEEEEETT----TEEEEEEECTTCSSCEEEEECSSC--CEEEEEETTEEEEEECTTC--TTCEE
T ss_pred CEEEEEEEECCCCCEEEEEEeCCC----CceEEEEEcCCCCceEEeecCCCc--eEEEEecCCcEEEEECCCC--CCCEE
Confidence 122223332 35554555443331 256788888777778877532221 1222334666666543221 12233
Q ss_pred ceEEeeeeccccccCCeEEccCCCCCCCceeEEEECCEEEEEcCCCC
Q 016413 247 EHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEG 293 (390)
Q Consensus 247 ~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~ 293 (390)
..+++. . +....|+.+.+-.....-.+....+++|++....++
T Consensus 298 ~~~d~~--~--~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg 340 (695)
T 2bkl_A 298 FEVDPA--K--PARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDA 340 (695)
T ss_dssp EEEBTT--B--CSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETT
T ss_pred EEEeCC--C--CCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECC
Confidence 334320 0 111238776442211111234455888888776543
No 151
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=90.98 E-value=3.7 Score=37.09 Aligned_cols=102 Identities=11% Similarity=0.023 Sum_probs=55.6
Q ss_pred EEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe--CCEEEEEeceeCCCCCCCCceEEEEECCCC
Q 016413 130 LFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (390)
Q Consensus 130 ~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (390)
++++.|+.++ .+.+||+.+.+......+... ...-.+++.. ++.+++.|+.+ ..+..||..+.
T Consensus 87 ~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~~d--------~~i~iwd~~~~ 151 (383)
T 3ei3_B 87 TTVAVGSKGG------DIILWDYDVQNKTSFIQGMGP-GDAITGMKFNQFNTNQLFVSSIR--------GATTLRDFSGS 151 (383)
T ss_dssp TEEEEEEBTS------CEEEEETTSTTCEEEECCCST-TCBEEEEEEETTEEEEEEEEETT--------TEEEEEETTSC
T ss_pred CEEEEEcCCC------eEEEEeCCCcccceeeecCCc-CCceeEEEeCCCCCCEEEEEeCC--------CEEEEEECCCC
Confidence 6788887763 488999988876654332111 1222333343 34677777542 45788998876
Q ss_pred CeEeCCCCCCCCC-CceEE-EECCEEEEEccCCCCCCCCCcceEEe
Q 016413 208 KWDSIPPLPSPRY-SPATQ-LWRGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 208 ~W~~~~~~p~~r~-~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
....+........ -.+++ .-++.+++.|+.+ ..+..|++
T Consensus 152 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~ 192 (383)
T 3ei3_B 152 VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST-----GRLLLLGL 192 (383)
T ss_dssp EEEEEECCCCSSCCEEEEEEETTTTEEEEEETT-----SEEEEEET
T ss_pred ceEEEeccCCCCCCeEEEEECCCCCEEEEECCC-----CCEEEEEC
Confidence 6555433221111 11222 2245666676653 35666664
No 152
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=90.84 E-value=2.5 Score=36.99 Aligned_cols=98 Identities=10% Similarity=0.150 Sum_probs=51.4
Q ss_pred CCEEEEEecCCCC-CCCCCeEEEEeCCCCceeecCCCCC--CCCCcceEEEE-eC-CEEEEEeceeCCCCCCCCceEEEE
Q 016413 128 KNLFYVFAGYGSL-DYVHSHVDVYNFTDNKWVDRFDMPK--DMAHSHLGVVS-DG-RYIYIVSGQYGPQCRGPTSRTFVL 202 (390)
Q Consensus 128 ~~~lyv~GG~~~~-~~~~~~v~~yd~~~~~W~~~~~l~~--~~~r~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~v~~y 202 (390)
++.||+....... ......+.+||+.+.++..+.. +. .....-.+++. -+ +.||+... ...+.+|
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~g~l~v~~~---------~~~l~~~ 97 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK-PEVNGYGGIPAGCQCDRDANQLFVADM---------RLGLLVV 97 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC-CEETTEECCEEEEEECSSSSEEEEEET---------TTEEEEE
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe-cccCCCCCCCceEEEecCCCcEEEEEC---------CCCEEEE
Confidence 5678887211000 0012459999998888876532 10 00111233443 34 78998763 1368899
Q ss_pred ECCCCCeEeC-CCCCCC---CCCceEEE-ECCEEEEEcc
Q 016413 203 DSETRKWDSI-PPLPSP---RYSPATQL-WRGRLHVMGG 236 (390)
Q Consensus 203 d~~~~~W~~~-~~~p~~---r~~~~~~~-~~~~iyv~GG 236 (390)
|++ .+.+.+ ...... ..-..++. -+++||+...
T Consensus 98 d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 135 (314)
T 1pjx_A 98 QTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAP 135 (314)
T ss_dssp ETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEEC
T ss_pred eCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEec
Confidence 998 777665 322111 11223333 2678888754
No 153
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=90.77 E-value=3 Score=36.59 Aligned_cols=101 Identities=9% Similarity=0.133 Sum_probs=49.2
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
++++++.|+.++ .+.+||..+.+-.. .+... ...-.+++. -++.+++.|+.+ ..+..||..+
T Consensus 66 ~~~~l~s~s~d~------~i~vwd~~~~~~~~--~~~~h-~~~v~~~~~~~~~~~l~sgs~D--------~~v~lWd~~~ 128 (304)
T 2ynn_A 66 RKNWIIVGSDDF------RIRVFNYNTGEKVV--DFEAH-PDYIRSIAVHPTKPYVLSGSDD--------LTVKLWNWEN 128 (304)
T ss_dssp GGTEEEEEETTS------EEEEEETTTCCEEE--EEECC-SSCEEEEEECSSSSEEEEEETT--------SCEEEEEGGG
T ss_pred CCCEEEEECCCC------EEEEEECCCCcEEE--EEeCC-CCcEEEEEEcCCCCEEEEECCC--------CeEEEEECCC
Confidence 556777777663 48888987765322 11110 111223333 245666777643 3466777765
Q ss_pred CCeEeCCCCCCCCCCceEEEE---CCEEEEEccCCCCCCCCCcceEEe
Q 016413 207 RKWDSIPPLPSPRYSPATQLW---RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
. +.....+......-..+.+ ++.+++.|+.+ ..+..|++
T Consensus 129 ~-~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D-----~~v~iwd~ 170 (304)
T 2ynn_A 129 N-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD-----RTVKVWSL 170 (304)
T ss_dssp T-TEEEEEECCCCSCEEEEEECTTCTTEEEEEETT-----SEEEEEET
T ss_pred C-cchhhhhcccCCcEEEEEECCCCCCEEEEEeCC-----CeEEEEEC
Confidence 3 2221111111111122222 34677777754 35677774
No 154
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=90.68 E-value=5.6 Score=34.57 Aligned_cols=201 Identities=9% Similarity=0.020 Sum_probs=93.9
Q ss_pred cccccccCCC--CeEECCCCCCcCCCceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCC-ceeecCCCCCCCCCcceEE
Q 016413 98 TFADLPAPDL--EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDN-KWVDRFDMPKDMAHSHLGV 174 (390)
Q Consensus 98 ~~~~~~~~~~--~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~-~W~~~~~l~~~~~r~~~~~ 174 (390)
.++.+|..+. .|+.-..-. .......+.-+++|++.+ .+.+..||++.+ .|+.-.+ . ....+++
T Consensus 16 ~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~--------~~~V~~~d~~G~~~W~~~~~--~--~~~~~~~ 82 (276)
T 3no2_A 16 KIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSY--------SKGAKMITRDGRELWNIAAP--A--GCEMQTA 82 (276)
T ss_dssp EEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEEC--------BSEEEEECTTSCEEEEEECC--T--TCEEEEE
T ss_pred EEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeC--------CCCEEEECCCCCEEEEEcCC--C--Ccccccc
Confidence 4556666444 465432110 112222333477888832 135899999433 3764332 1 1112233
Q ss_pred E-EeCCEEEEEeceeCCCCCCCCceEEEEECCCC-CeEeCC--CCCCC--CCCceEEEECCEEEEEccCCCCCCCCCcce
Q 016413 175 V-SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR-KWDSIP--PLPSP--RYSPATQLWRGRLHVMGGSKENRHTPGLEH 248 (390)
Q Consensus 175 ~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~-~W~~~~--~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 248 (390)
. ..++++++....+ ...++.+|+..+ .|+.-. ..+.+ .........++.+++.... ...+.+
T Consensus 83 ~~~~dG~~lv~~~~~-------~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~-----~~~v~~ 150 (276)
T 3no2_A 83 RILPDGNALVAWCGH-------PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA-----TSEVRE 150 (276)
T ss_dssp EECTTSCEEEEEEST-------TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT-----TTEEEE
T ss_pred EECCCCCEEEEecCC-------CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC-----CCEEEE
Confidence 3 3466676664310 245777887544 244321 11111 1112233445666665432 123444
Q ss_pred EEeeeeccccccCCeEEccCCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-C-CC-C
Q 016413 249 WSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-D-EM-K 325 (390)
Q Consensus 249 ~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~-~~-~ 325 (390)
|+. + ....|+.-.+. .........++.+++.+..++ .+..+| . .+ .
T Consensus 151 ~d~-----~-G~~~w~~~~~~---~~~~~~~~~~g~~~v~~~~~~----------------------~v~~~d~~tG~~~ 199 (276)
T 3no2_A 151 IAP-----N-GQLLNSVKLSG---TPFSSAFLDNGDCLVACGDAH----------------------CFVQLNLESNRIV 199 (276)
T ss_dssp ECT-----T-SCEEEEEECSS---CCCEEEECTTSCEEEECBTTS----------------------EEEEECTTTCCEE
T ss_pred ECC-----C-CCEEEEEECCC---CccceeEcCCCCEEEEeCCCC----------------------eEEEEeCcCCcEE
Confidence 442 2 34456654321 111133344678888776532 389999 4 23 7
Q ss_pred eEECC-CCCCCCC-cceeEEEEECCEEEEEc
Q 016413 326 WKVLP-PMPKPNS-HIECAWVIVNNSIIITG 354 (390)
Q Consensus 326 W~~~~-~~~~~~~-~~~~~~~~~~~~l~v~G 354 (390)
|+.-. .++..+. ......+..++.+||..
T Consensus 200 w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 200 RRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred EEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 77642 2222222 22222344588898886
No 155
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=90.63 E-value=6.5 Score=34.05 Aligned_cols=15 Identities=7% Similarity=0.341 Sum_probs=11.0
Q ss_pred eeeeeccCCCceEee
Q 016413 52 VASNWALEKSGVVVI 66 (390)
Q Consensus 52 ~~~~~d~~~~~W~~l 66 (390)
++..||..+.+-..+
T Consensus 46 tV~iWd~~tg~~~~~ 60 (318)
T 4ggc_A 46 SVYLWSASSGDILQL 60 (318)
T ss_dssp EEEEEETTTCCEEEE
T ss_pred EEEEEECCCCCEEEE
Confidence 688888888776554
No 156
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=90.53 E-value=9.8 Score=34.48 Aligned_cols=190 Identities=12% Similarity=0.127 Sum_probs=90.5
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCC--CCCCCCCcceEEEE--eCCEEEEEeceeCCCCCCCCceEEEEEC
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD--MPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~--l~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (390)
+..++.|+.++ .+..||+.+.+-...-. .+......-.++.. .++.+++.|+.++ .+..||+
T Consensus 170 ~~~l~s~s~D~------~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~--------~v~~wd~ 235 (380)
T 3iz6_a 170 ETRLITGSGDQ------TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT--------TVRLWDL 235 (380)
T ss_dssp SSCEEEECTTS------CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS--------CEEEEET
T ss_pred CCEEEEECCCC------cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC--------eEEEEEC
Confidence 34566676653 48888988776443221 11110111122222 2667888887543 4677887
Q ss_pred CCC--CeEeCCCCCCCCCCceEEEE-CCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEE-ccCCC------CCCC
Q 016413 205 ETR--KWDSIPPLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRT-EIPIP------RGGP 274 (390)
Q Consensus 205 ~~~--~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~-~~~~p------~~~~ 274 (390)
... .-..+..-. ..-.+++.. ++..++.|+.+ ..+..||+ .+.+-.. ....+ .+..
T Consensus 236 ~~~~~~~~~~~~h~--~~v~~v~~~p~~~~l~s~s~D-----~~i~lwd~-------~~~~~~~~~~~~~~~~~~~~~~v 301 (380)
T 3iz6_a 236 RITSRAVRTYHGHE--GDINSVKFFPDGQRFGTGSDD-----GTCRLFDM-------RTGHQLQVYNREPDRNDNELPIV 301 (380)
T ss_dssp TTTCCCCEEECCCS--SCCCEEEECTTSSEEEEECSS-----SCEEEEET-------TTTEEEEEECCCCSSSCCSSCSC
T ss_pred CCCCcceEEECCcC--CCeEEEEEecCCCeEEEEcCC-----CeEEEEEC-------CCCcEEEEecccccccccccCce
Confidence 532 111111100 011122222 55677777654 45777875 2222111 11111 0111
Q ss_pred ceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCe-EECCCCCCC-CCcceeEEEEECCEEE
Q 016413 275 HRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKW-KVLPPMPKP-NSHIECAWVIVNNSII 351 (390)
Q Consensus 275 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W-~~~~~~~~~-~~~~~~~~~~~~~~l~ 351 (390)
...+...++++++.|+.++. |.++| ...+- ..+..+... .....+.....+++.+
T Consensus 302 ~~~~~s~~g~~l~~g~~dg~----------------------i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l 359 (380)
T 3iz6_a 302 TSVAFSISGRLLFAGYSNGD----------------------CYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSAL 359 (380)
T ss_dssp SEEEECSSSSEEEEECTTSC----------------------EEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEE
T ss_pred EEEEECCCCCEEEEEECCCC----------------------EEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEE
Confidence 11223336778888876643 88888 44432 233222211 1122222233478888
Q ss_pred EEcCCCCCCCcceeeEEeeeEEEeecCcc
Q 016413 352 ITGGTTEKHPMTKRMILVGEVFQFHLDSL 380 (390)
Q Consensus 352 v~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 380 (390)
+.|+.++. +.+|++...
T Consensus 360 ~sgs~D~~------------i~iW~~~~~ 376 (380)
T 3iz6_a 360 CTGSWDKN------------LKIWAFSGH 376 (380)
T ss_dssp EEECTTSC------------EEEEECCSS
T ss_pred EEeeCCCC------------EEEEecCCC
Confidence 88887755 666666543
No 157
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=90.49 E-value=5.6 Score=34.60 Aligned_cols=138 Identities=7% Similarity=0.027 Sum_probs=63.8
Q ss_pred eeeeeccCCCceEeecCCCCCccccccceEEEecCCCch-hHHHhhhcccccccCCCCeEEC-CCCCC--cCC-CceEEE
Q 016413 52 VASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQD-AERFLSATFADLPAPDLEWEQM-PSAPV--PRL-DGAAIQ 126 (390)
Q Consensus 52 ~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~W~~~-~~~~~--~R~-~~~~~~ 126 (390)
.+.+||+.+.++..+..-..........+++.-.+.+.. ... ....++.+|+. .+...+ ..... +.. -..++.
T Consensus 47 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~ 124 (314)
T 1pjx_A 47 EILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAF 124 (314)
T ss_dssp EEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEE
T ss_pred EEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEE
Confidence 688899888887765430000000111223322220110 000 11257778877 666555 32211 111 122322
Q ss_pred -ECCEEEEEecCCC---------CCCCCCeEEEEeCCCCceeecCC-CCCCCCCcceEEEEe-----CC-EEEEEeceeC
Q 016413 127 -IKNLFYVFAGYGS---------LDYVHSHVDVYNFTDNKWVDRFD-MPKDMAHSHLGVVSD-----GR-YIYIVSGQYG 189 (390)
Q Consensus 127 -~~~~lyv~GG~~~---------~~~~~~~v~~yd~~~~~W~~~~~-l~~~~~r~~~~~~~~-----~~-~iyv~GG~~~ 189 (390)
-++++|+....+. .......+++||+. .+...+.. +.. ...++.. ++ .||+....
T Consensus 125 d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~-----~~~i~~~~~~d~dg~~l~v~~~~-- 196 (314)
T 1pjx_A 125 DYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQF-----PNGIAVRHMNDGRPYQLIVAETP-- 196 (314)
T ss_dssp CTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESS-----EEEEEEEECTTSCEEEEEEEETT--
T ss_pred CCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCC-----cceEEEecccCCCCCEEEEEECC--
Confidence 2568888754321 11123569999987 55544321 111 1233333 34 57776521
Q ss_pred CCCCCCCceEEEEECC
Q 016413 190 PQCRGPTSRTFVLDSE 205 (390)
Q Consensus 190 ~~~~~~~~~v~~yd~~ 205 (390)
...+++||+.
T Consensus 197 ------~~~i~~~~~~ 206 (314)
T 1pjx_A 197 ------TKKLWSYDIK 206 (314)
T ss_dssp ------TTEEEEEEEE
T ss_pred ------CCeEEEEECC
Confidence 3568888865
No 158
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=90.33 E-value=2.1 Score=45.83 Aligned_cols=188 Identities=10% Similarity=0.100 Sum_probs=89.5
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (390)
++..+++|+.++ .+..||..+.+-.....-.. .........-+++..+.|+.+ ..+..||..+.
T Consensus 972 ~g~~l~~g~~~g------~i~i~d~~~~~~~~~~~~h~--~~v~~l~~s~dg~~l~s~~~d--------g~i~vwd~~~~ 1035 (1249)
T 3sfz_A 972 HLEYVAFGDEDG------AIKIIELPNNRVFSSGVGHK--KAVRHIQFTADGKTLISSSED--------SVIQVWNWQTG 1035 (1249)
T ss_dssp TSSEEEEEETTS------CCEEEETTTTSCEEECCCCS--SCCCCEEECSSSSCEEEECSS--------SBEEEEETTTT
T ss_pred CCCEEEEEcCCC------CEEEEEcCCCceeeecccCC--CceEEEEECCCCCEEEEEcCC--------CEEEEEECCCC
Confidence 455666676553 47888887765433211111 111212222356667777643 45788998887
Q ss_pred CeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeEEEECCEEEE
Q 016413 208 KWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFV 287 (390)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv 287 (390)
....+.... ..-.+++...+..++.|+.+ ..+..|++ .+.+-...-..........+..-+++.++
T Consensus 1036 ~~~~~~~~~--~~v~~~~~~~~~~l~~~~~d-----g~v~vwd~-------~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 1101 (1249)
T 3sfz_A 1036 DYVFLQAHQ--ETVKDFRLLQDSRLLSWSFD-----GTVKVWNV-------ITGRIERDFTCHQGTVLSCAISSDATKFS 1101 (1249)
T ss_dssp EEECCBCCS--SCEEEEEECSSSEEEEEESS-----SEEEEEET-------TTTCCCEEEECCSSCCCCEEECSSSSSCE
T ss_pred ceEEEecCC--CcEEEEEEcCCCcEEEEECC-----CcEEEEEC-------CCCceeEEEcccCCcEEEEEECCCCCEEE
Confidence 665433211 11222333344445555543 34666764 23322111111111111122334666777
Q ss_pred EcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCCCCCCcceeEEEEECCEEEEEcCCCCCCCcceee
Q 016413 288 VGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHIECAWVIVNNSIIITGGTTEKHPMTKRM 366 (390)
Q Consensus 288 ~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~ 366 (390)
.|+.++. +.+|| .+.+ .+..+........+.+...++++++.|+.++.
T Consensus 1102 s~s~d~~----------------------v~iwd~~~~~--~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~------- 1150 (1249)
T 3sfz_A 1102 STSADKT----------------------AKIWSFDLLS--PLHELKGHNGCVRCSAFSLDGILLATGDDNGE------- 1150 (1249)
T ss_dssp EECCSSC----------------------CCEECSSSSS--CSBCCCCCSSCEEEEEECSSSSEEEEEETTSC-------
T ss_pred EEcCCCc----------------------EEEEECCCcc--eeeeeccCCCcEEEEEECCCCCEEEEEeCCCE-------
Confidence 7776543 66676 4332 22223222222222223347778888876544
Q ss_pred EEeeeEEEeecCccc
Q 016413 367 ILVGEVFQFHLDSLV 381 (390)
Q Consensus 367 ~~~~~v~~yd~~~~~ 381 (390)
|.+||+.+.+
T Consensus 1151 -----i~vwd~~~~~ 1160 (1249)
T 3sfz_A 1151 -----IRIWNVSDGQ 1160 (1249)
T ss_dssp -----CCEEESSSSC
T ss_pred -----EEEEECCCCc
Confidence 5567766543
No 159
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=90.30 E-value=6.7 Score=39.24 Aligned_cols=183 Identities=11% Similarity=0.032 Sum_probs=84.4
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEE-CCEEEEEecCCCCC----------CCCCeEEEEeCCCCcee--ecCCCC
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLD----------YVHSHVDVYNFTDNKWV--DRFDMP 164 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~-~~~lyv~GG~~~~~----------~~~~~v~~yd~~~~~W~--~~~~l~ 164 (390)
.++.+|..+.+..... ++... ...++.. +++-++++..+... .....++++++.+.+-+ .+...+
T Consensus 152 ~i~v~d~~tg~~~~~~-~~~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~ 229 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDV-LERVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFP 229 (710)
T ss_dssp EEEEEETTTTEEEEEE-EEEEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCT
T ss_pred EEEEEECCCCCCCccc-ccCcc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccC
Confidence 5777777776655431 11111 1223333 55544444443320 12356999999887643 221222
Q ss_pred CCCCCcceEEE-EeCCEEEEEeceeCCCCCCCCceEEEEECCC------C--CeEeCCCCCCCCCCceEEEECCEEEEEc
Q 016413 165 KDMAHSHLGVV-SDGRYIYIVSGQYGPQCRGPTSRTFVLDSET------R--KWDSIPPLPSPRYSPATQLWRGRLHVMG 235 (390)
Q Consensus 165 ~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~------~--~W~~~~~~p~~r~~~~~~~~~~~iyv~G 235 (390)
.. .....++. .-+++..++....... ..++++.+|..+ . .++.+..-.... .......++.||+.+
T Consensus 230 ~~-~~~~~~~~~SpDg~~l~~~~~~~~~---~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s 304 (710)
T 2xdw_A 230 DE-PKWMGGAELSDDGRYVLLSIREGCD---PVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKT 304 (710)
T ss_dssp TC-TTCEEEEEECTTSCEEEEEEECSSS---SCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEE
T ss_pred CC-CeEEEEEEEcCCCCEEEEEEEccCC---CccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEE
Confidence 10 12222233 2345444444322211 157899999875 3 577765422221 112334577888886
Q ss_pred cCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeEEEE-CCEEEEEcCCCC
Q 016413 236 GSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF-NDRLFVVGGQEG 293 (390)
Q Consensus 236 G~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~ 293 (390)
..... ...+..+++. . +....|+.+.+-.....-.++... ++++++....++
T Consensus 305 ~~~~~--~~~l~~~d~~--~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 305 NRHSP--NYRLINIDFT--D--PEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp CTTCT--TCEEEEEETT--S--CCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT
T ss_pred CCCCC--CCEEEEEeCC--C--CCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC
Confidence 54321 2233334321 0 111258876443221111234455 777877765443
No 160
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=90.28 E-value=1.8 Score=41.90 Aligned_cols=66 Identities=12% Similarity=-0.032 Sum_probs=33.2
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCC------ceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEE
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDN------KWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTF 200 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~------~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~ 200 (390)
++++++.|+.++ .+.+||..+. ....+..+... ...-.+++. -+++.++.++.+... ...++
T Consensus 77 ~~~~l~s~~~dg------~v~vw~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~~~~~----~~~v~ 145 (615)
T 1pgu_A 77 GSQYLCSGDESG------KVIVWGWTFDKESNSVEVNVKSEFQVL-AGPISDISWDFEGRRLCVVGEGRDN----FGVFI 145 (615)
T ss_dssp TCCEEEEEETTS------EEEEEEEEEEGGGTEEEEEEEEEEECC-SSCEEEEEECTTSSEEEEEECCSSC----SEEEE
T ss_pred CCCEEEEecCCC------EEEEEeCCCCcccccccccccchhhcc-cccEEEEEEeCCCCEEEEeccCCCC----ccEEE
Confidence 567788887653 4777777544 33333222211 111222232 355666666643321 35677
Q ss_pred EEEC
Q 016413 201 VLDS 204 (390)
Q Consensus 201 ~yd~ 204 (390)
.+|.
T Consensus 146 ~~d~ 149 (615)
T 1pgu_A 146 SWDS 149 (615)
T ss_dssp ETTT
T ss_pred EEEC
Confidence 7773
No 161
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=90.26 E-value=3.8 Score=36.30 Aligned_cols=67 Identities=7% Similarity=0.044 Sum_probs=35.8
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeC----CEEEEEeceeCCCCCCCCceEEEEEC
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDG----RYIYIVSGQYGPQCRGPTSRTFVLDS 204 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~----~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (390)
.++++.|+.+... ..+.+||..+.+......... ...-.+++... +.+++.|+.+ ..+..||.
T Consensus 31 ~~l~~~~s~~~~d---~~v~iw~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~l~~~~~d--------g~i~iwd~ 97 (357)
T 3i2n_A 31 AKFVTMGNFARGT---GVIQLYEIQHGDLKLLREIEK--AKPIKCGTFGATSLQQRYLATGDFG--------GNLHIWNL 97 (357)
T ss_dssp SEEEEEEC--CCC---EEEEEEEECSSSEEEEEEEEE--SSCEEEEECTTCCTTTCCEEEEETT--------SCEEEECT
T ss_pred ceEEEecCccCCC---cEEEEEeCCCCcccceeeecc--cCcEEEEEEcCCCCCCceEEEecCC--------CeEEEEeC
Confidence 3677777653211 358889988877654432222 11122333322 4677777643 34777887
Q ss_pred CCCC
Q 016413 205 ETRK 208 (390)
Q Consensus 205 ~~~~ 208 (390)
.+..
T Consensus 98 ~~~~ 101 (357)
T 3i2n_A 98 EAPE 101 (357)
T ss_dssp TSCS
T ss_pred CCCC
Confidence 7654
No 162
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=90.06 E-value=14 Score=35.51 Aligned_cols=133 Identities=8% Similarity=0.046 Sum_probs=67.6
Q ss_pred CEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEeeeecc
Q 016413 179 RYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDG 256 (390)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~ 256 (390)
+.+++.|+.. -..+..||..+..... ..+.........+.+ ++++++.|+.+ ..+..|++
T Consensus 456 ~~~l~~~~~~-------d~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~d-----g~i~iw~~----- 517 (615)
T 1pgu_A 456 QNYVAVGLEE-------GNTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVM-----GKILLYDL----- 517 (615)
T ss_dssp SSEEEEEETT-------TSCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEET-----
T ss_pred CCEEEEeecC-------CCeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCC-----CeEEEeeC-----
Confidence 5566666530 2347889988765532 222222222223333 66777777654 35677774
Q ss_pred ccccCCeEEccCCCC-CCCceeEEEE------------CCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-C
Q 016413 257 KALEKAWRTEIPIPR-GGPHRACFVF------------NDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-D 322 (390)
Q Consensus 257 ~~~~~~W~~~~~~p~-~~~~~~~~~~------------~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~ 322 (390)
.+ ...+..+.. .......+.+ ++++++.|+.++. |.+|| .
T Consensus 518 --~~--~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~----------------------i~iw~~~ 571 (615)
T 1pgu_A 518 --QS--REVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTN----------------------IFIYSVK 571 (615)
T ss_dssp --TT--TEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSC----------------------EEEEESS
T ss_pred --CC--CcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCc----------------------EEEEECC
Confidence 22 223333221 1111233333 6788888887653 77887 5
Q ss_pred CC--CeEECCCCCCCCCcceeEEEEECCEEEEEcCCCCC
Q 016413 323 EM--KWKVLPPMPKPNSHIECAWVIVNNSIIITGGTTEK 359 (390)
Q Consensus 323 ~~--~W~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~ 359 (390)
+. ....+..- ...........+++ ++.+|.++.
T Consensus 572 ~~~~~~~~~~~h---~~~v~~l~~s~~~~-l~s~~~d~~ 606 (615)
T 1pgu_A 572 RPMKIIKALNAH---KDGVNNLLWETPST-LVSSGADAC 606 (615)
T ss_dssp CTTCCEEETTSS---TTCEEEEEEEETTE-EEEEETTSC
T ss_pred CCceechhhhcC---ccceEEEEEcCCCC-eEEecCCce
Confidence 43 33333221 22222233456788 777776544
No 163
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=89.98 E-value=17 Score=36.35 Aligned_cols=98 Identities=16% Similarity=0.223 Sum_probs=57.4
Q ss_pred ceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCc--eeecCCCCCCC---C---CcceEEEEeCCEEEEEeceeCCCCC
Q 016413 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDM---A---HSHLGVVSDGRYIYIVSGQYGPQCR 193 (390)
Q Consensus 122 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~l~~~~---~---r~~~~~~~~~~~iyv~GG~~~~~~~ 193 (390)
.+.++.++.||+.... ..+..+|..+.+ |+.-...+... . ....+.++.+++||+...
T Consensus 64 ~~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------- 129 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPF-------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------- 129 (689)
T ss_dssp CCCEEETTEEEEECGG-------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------
T ss_pred ecCEEECCEEEEEcCC-------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------
Confidence 3446779999997542 348889987654 87643322100 0 012234667898888642
Q ss_pred CCCceEEEEECCCCC--eEeCCC-CCC--CCCCceEEEECCEEEEEc
Q 016413 194 GPTSRTFVLDSETRK--WDSIPP-LPS--PRYSPATQLWRGRLHVMG 235 (390)
Q Consensus 194 ~~~~~v~~yd~~~~~--W~~~~~-~p~--~r~~~~~~~~~~~iyv~G 235 (390)
-..+..+|.++.+ |+.-.. -+. .....+-++.++.+|+-.
T Consensus 130 --dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~ 174 (689)
T 1yiq_A 130 --DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGN 174 (689)
T ss_dssp --TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECC
T ss_pred --CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEe
Confidence 3568889987654 876542 111 112233456788888743
No 164
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=89.66 E-value=6.2 Score=35.56 Aligned_cols=65 Identities=2% Similarity=-0.039 Sum_probs=36.3
Q ss_pred CeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-CCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCC
Q 016413 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP 214 (390)
Q Consensus 145 ~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 214 (390)
..++++|+.+.+-..+..-+. ........- +++.+++....... .....++.+|..+...+.+..
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~---~~~~~~~sp~dg~~l~~~~~~~~~--~~~~~l~~~d~~~~~~~~l~~ 233 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQ---WLGHPIYRPYDDSTVAFCHEGPHD--LVDARMWLINEDGTNMRKVKT 233 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESS---CEEEEEEETTEEEEEEEEECSCTT--TSSCSEEEEETTSCCCEESCC
T ss_pred ceEEEEECCCCceEEeecCCc---cccccEECCCCCCEEEEEEecCCC--CCcceEEEEeCCCCceEEeee
Confidence 579999999887655543221 222222223 45544444322111 124679999998877666654
No 165
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=89.58 E-value=19 Score=36.44 Aligned_cols=152 Identities=14% Similarity=0.164 Sum_probs=76.0
Q ss_pred cccccccCCCCeEECCC-C-----CC---cCCCceEEEE----CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCC-C
Q 016413 98 TFADLPAPDLEWEQMPS-A-----PV---PRLDGAAIQI----KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD-M 163 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~-~-----~~---~R~~~~~~~~----~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~-l 163 (390)
.+++..-...+|+.+.. + +. .......+.+ .+.||+..|..........+++=+=...+|+++.. .
T Consensus 44 gv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~ 123 (763)
T 3a0f_A 44 GTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPV 123 (763)
T ss_dssp CEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSS
T ss_pred cEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccCCCCceEEEECCCCCCceeccCCc
Confidence 35555556778998865 3 21 1122222333 25788876631111112345554445679998752 1
Q ss_pred CCC---CCCcc-eEEEEe---CCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCC---CCceEEEE----CC
Q 016413 164 PKD---MAHSH-LGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPR---YSPATQLW----RG 229 (390)
Q Consensus 164 ~~~---~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r---~~~~~~~~----~~ 229 (390)
+.+ ..|.. ..+++. .+.+|+.+. ...+++=+-.-.+|+++..++... .....+.+ .+
T Consensus 124 ~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~---------~~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~ 194 (763)
T 3a0f_A 124 PMGANDMGRNGGERLAVNPHWTDELWFGSR---------TQGLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVG 194 (763)
T ss_dssp CCCTTSTTTTSBCCEEECTTSTTCEEEECS---------SSCEEEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTT
T ss_pred ccCccccCccccceEEECCCCCCEEEEEeC---------CCcEEEECCCCcCccccccCcccCCCccceEEEEECCCCCC
Confidence 110 12321 234443 367887641 133555444567899998766432 22222222 34
Q ss_pred EEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCC
Q 016413 230 RLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIP 270 (390)
Q Consensus 230 ~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p 270 (390)
.||+.....+ ..|... ....+|+.+...|
T Consensus 195 ~~~~~~~~~g-------~v~~S~-----DgG~tW~~~~~~~ 223 (763)
T 3a0f_A 195 TAYVASHAVG-------GLWVTW-----DGGANWSQVGGQP 223 (763)
T ss_dssp CEEEEESSTT-------CEEEES-----SSSSSCEECTTCC
T ss_pred EEEEEEeCCC-------eEEEEC-----CCCCCccccCCCc
Confidence 6777643211 222211 2456899886555
No 166
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=89.37 E-value=5.2 Score=34.88 Aligned_cols=104 Identities=11% Similarity=0.108 Sum_probs=51.0
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCC--CceeecCCCCCCCCCcceEEEEe---CCEEEEEeceeCCCCCCCCceEEEE
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTD--NKWVDRFDMPKDMAHSHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVL 202 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~--~~W~~~~~l~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~~y 202 (390)
++++++.|+.++ .+.+||..+ ..++.+..+... ...-.+++.. ++.+++.|+.++ .+.+|
T Consensus 22 ~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~d~~~l~s~~~dg--------~v~vw 86 (351)
T 3f3f_A 22 YGRHVATCSSDQ------HIKVFKLDKDTSNWELSDSWRAH-DSSIVAIDWASPEYGRIIASASYDK--------TVKLW 86 (351)
T ss_dssp SSSEEEEEETTS------EEEEEEECSSSCCEEEEEEEECC-SSCEEEEEECCGGGCSEEEEEETTS--------CEEEE
T ss_pred CCCEEEEeeCCC------eEEEEECCCCCCcceecceeccC-CCcEEEEEEcCCCCCCEEEEEcCCC--------eEEEE
Confidence 456777777653 466676654 345444333221 1122233333 367777777543 36667
Q ss_pred ECCCC-------CeEeCCCCCCCCCCceEEEE--C--CEEEEEccCCCCCCCCCcceEEe
Q 016413 203 DSETR-------KWDSIPPLPSPRYSPATQLW--R--GRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 203 d~~~~-------~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
|..+. .|+.+..+.........+.. + +.+++.|+.+ ..+..|++
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iwd~ 141 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND-----GILRLYDA 141 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----CEEEEEEC
T ss_pred ecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC-----CcEEEecC
Confidence 76553 34444333222222222222 2 5566666643 34666664
No 167
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=89.34 E-value=6.8 Score=36.09 Aligned_cols=82 Identities=11% Similarity=0.132 Sum_probs=46.2
Q ss_pred eEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceE
Q 016413 146 HVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPAT 224 (390)
Q Consensus 146 ~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 224 (390)
.|.++|..+.+-..+-.+... ...-.+++. -++.+++.|+.+ ..+.+||.++.+- +..+........+
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~-~~~V~sv~fspdg~~lasgs~D--------g~v~iWd~~~~~~--~~~~~~h~~~v~~ 194 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQP-GEYISSVAWIKEGNYLAVGTSS--------AEVQLWDVQQQKR--LRNMTSHSARVGS 194 (420)
T ss_dssp EEEEEETTTCCEEEEEECCST-TCCEEEEEECTTSSEEEEEETT--------SCEEEEETTTTEE--EEEECCCSSCEEE
T ss_pred EEEEEECCCCCEEEEEEecCC-CCcEEEEEECCCCCEEEEEECC--------CeEEEEEcCCCcE--EEEEeCCCCceEE
Confidence 589999998876655444331 111223333 366777888753 3478889877643 2222222223334
Q ss_pred EEECCEEEEEccCC
Q 016413 225 QLWRGRLHVMGGSK 238 (390)
Q Consensus 225 ~~~~~~iyv~GG~~ 238 (390)
...++.+.+.|+.+
T Consensus 195 ~s~~~~~l~sgs~d 208 (420)
T 4gga_A 195 LSWNSYILSSGSRS 208 (420)
T ss_dssp EEEETTEEEEEETT
T ss_pred EeeCCCEEEEEeCC
Confidence 45567777777654
No 168
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=89.14 E-value=6.6 Score=34.60 Aligned_cols=95 Identities=8% Similarity=0.062 Sum_probs=52.6
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
+++||+.+..+ ..+++||+.+.+...+..... ..-.+++. -++++|+....+. .....+++||+.+
T Consensus 55 ~g~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~---~~~~~i~~~~dg~l~v~~~~~~----~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 55 QGQLFLLDVFE------GNIFKINPETKEIKRPFVSHK---ANPAAIKIHKDGRLFVCYLGDF----KSTGGIFAATENG 121 (333)
T ss_dssp TSCEEEEETTT------CEEEEECTTTCCEEEEEECSS---SSEEEEEECTTSCEEEEECTTS----SSCCEEEEECTTS
T ss_pred CCCEEEEECCC------CEEEEEeCCCCcEEEEeeCCC---CCcceEEECCCCcEEEEeCCCC----CCCceEEEEeCCC
Confidence 56788876543 359999999888776532111 22233444 3678888753221 1135799999988
Q ss_pred CCeEe-CCCCCCCCCCceEEEE-CCEEEEEc
Q 016413 207 RKWDS-IPPLPSPRYSPATQLW-RGRLHVMG 235 (390)
Q Consensus 207 ~~W~~-~~~~p~~r~~~~~~~~-~~~iyv~G 235 (390)
..-+. +........-..++.. ++++|+..
T Consensus 122 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 152 (333)
T 2dg1_A 122 DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTD 152 (333)
T ss_dssp CSCEEEECSSSSCCCEEEEEECTTSCEEEEE
T ss_pred CEEEEEEccCccCCcccceEECCCCCEEEEe
Confidence 77553 2222111111222222 56788764
No 169
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=89.12 E-value=21 Score=36.30 Aligned_cols=199 Identities=12% Similarity=0.158 Sum_probs=98.9
Q ss_pred cccccccCCCCeEECCCCCC-----cCCCceEEEEC---CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCC-CCCC--
Q 016413 98 TFADLPAPDLEWEQMPSAPV-----PRLDGAAIQIK---NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD-MPKD-- 166 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~-----~R~~~~~~~~~---~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~-l~~~-- 166 (390)
.+++.+-...+|+.+...+. .+.-.++++-. +.||+..|....... ..+++=+-...+|+.+.. ++.+
T Consensus 38 gv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~-~~v~~S~DgG~TW~~~~~~~~~~~~ 116 (789)
T 1sqj_A 38 GAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEW-AAFYVSEDRGQSFTIYESPFPMGAN 116 (789)
T ss_dssp CEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSC-CEEEEESSTTSEEEEEECSSCCCTT
T ss_pred CEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcc-cEEEEECCCCCcceeccCCcccCcc
Confidence 45666656779999865331 12233333332 468887664321111 345555556779998742 1110
Q ss_pred -CCC-cceEEEEe---CCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCC---CCCCceEEEE----CCEEEEE
Q 016413 167 -MAH-SHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPS---PRYSPATQLW----RGRLHVM 234 (390)
Q Consensus 167 -~~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~---~r~~~~~~~~----~~~iyv~ 234 (390)
..| ....+++. .+.+|+ |.. ...+++=+-.-++|+++..+|. .-.....+.+ .+.||+.
T Consensus 117 ~~~~~~~~~iav~p~~~~~v~~-g~~--------~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~ 187 (789)
T 1sqj_A 117 DMGRNNGERLAVNPFNSNEVWM-GTR--------TEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYAS 187 (789)
T ss_dssp STTTTSCCCEEEETTEEEEEEE-ECS--------SSCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEE
T ss_pred CCCccceeEEEEcCCCCCEEEE-Eec--------cCCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEE
Confidence 012 12334443 356666 321 1335555445678999876442 1122223332 2467776
Q ss_pred ccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCC-------C---------ceeEEEE--CCEEEEEcCCC-CCC
Q 016413 235 GGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGG-------P---------HRACFVF--NDRLFVVGGQE-GDF 295 (390)
Q Consensus 235 GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~-------~---------~~~~~~~--~~~iyv~GG~~-~~~ 295 (390)
.... ...|... ....+|+.+..+|... . .+.+++. .+.||+..+.. ...
T Consensus 188 ~~~~-------~~v~~S~-----DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~ 255 (789)
T 1sqj_A 188 ATAP-------QGMYVTH-----DGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPW 255 (789)
T ss_dssp ESST-------TCEEEES-----STTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSS
T ss_pred EcCC-------CeEEEEc-----CCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCCCC
Confidence 4321 1222211 2456899887555432 0 0222222 78888874211 000
Q ss_pred CCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCC
Q 016413 296 MAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMP 333 (390)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~ 333 (390)
......+++.+ ...+|+.+...+
T Consensus 256 ---------------~g~~g~l~~S~DgG~tW~~~~~~~ 279 (789)
T 1sqj_A 256 ---------------GVTFGEVWRQNRTSGAWDDITPRV 279 (789)
T ss_dssp ---------------CCCCCCEEEEETTTCCEEECCCCT
T ss_pred ---------------CCCCceEEEEeCCCCceEECcCCC
Confidence 00112477777 677999987644
No 170
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=88.46 E-value=4.9 Score=36.56 Aligned_cols=63 Identities=8% Similarity=0.011 Sum_probs=34.2
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
+++.++.|+.++ .+.++|..+.+-...-....+ ........-+++..+.||.++ .+.+||..+
T Consensus 77 ~~~~l~s~s~D~------~v~iWd~~~~~~~~~~~~h~~--~v~~~~~s~~g~~las~~~d~--------~v~iw~~~~ 139 (380)
T 3iz6_a 77 EKNWIVSASQDG------RLIVWNALTSQKTHAIKLHCP--WVMECAFAPNGQSVACGGLDS--------ACSIFNLSS 139 (380)
T ss_dssp TSSCEEEEETTS------EEEEEETTTTEEEEEEECCCT--TCCCCEECTTSSEEEECCSSS--------CCEEEECCC
T ss_pred CCCEEEEEeCCC------eEEEEECCCCccceEEecCCC--CEEEEEECCCCCEEEEeeCCC--------cEEEEECCC
Confidence 456777777763 488888877654332111111 111112234667778887643 345666654
No 171
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=88.25 E-value=4.1 Score=39.16 Aligned_cols=98 Identities=9% Similarity=0.030 Sum_probs=46.6
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
+++.++.|+.++ .+..||...+.-..+..... .-.+++. -++++++.++.+ ..+..||...
T Consensus 396 dg~~l~~~~~d~------~v~~~~~~~~~~~~~~~~~~----~v~~~~~s~d~~~l~~~~~d--------~~v~~w~~~~ 457 (577)
T 2ymu_A 396 DGQTIASASDDK------TVKLWNRNGQLLQTLTGHSS----SVWGVAFSPDDQTIASASDD--------KTVKLWNRNG 457 (577)
T ss_dssp TSSCEEEEETTS------EEEEECTTCCEEEEEECCSS----CEEEEEECTTSSEEEEEETT--------SEEEEEETTS
T ss_pred CCCEEEEEeCCC------EEEEEeCCCCEEEEecCCCC----CeEEEEECCCCCEEEEEcCC--------CEEEEEECCC
Confidence 556777777653 47778865443333322111 1122333 356666666532 3467778655
Q ss_pred CCeEeCCCCCCCCCCceEE-EECCEEEEEccCCCCCCCCCcceEE
Q 016413 207 RKWDSIPPLPSPRYSPATQ-LWRGRLHVMGGSKENRHTPGLEHWS 250 (390)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~ 250 (390)
..-..+..... .-.+++ .-++++++.|+.+ ..+..|+
T Consensus 458 ~~~~~~~~~~~--~v~~~~~spd~~~las~~~d-----~~i~iw~ 495 (577)
T 2ymu_A 458 QLLQTLTGHSS--SVRGVAFSPDGQTIASASDD-----KTVKLWN 495 (577)
T ss_dssp CEEEEEECCSS--CEEEEEECTTSCEEEEEETT-----SEEEEEE
T ss_pred CEEEEEcCCCC--CEEEEEEcCCCCEEEEEeCC-----CEEEEEc
Confidence 43333322111 111222 2256666666643 2455665
No 172
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=88.23 E-value=8.3 Score=33.60 Aligned_cols=217 Identities=10% Similarity=0.068 Sum_probs=101.3
Q ss_pred ccEEEEecCCCCCCCccccceeeeeccCCCceEeecCCCCCccccccceEEEecCCCchhHHHhhhcccccccCCCCeEE
Q 016413 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQ 111 (390)
Q Consensus 32 ~~~l~~~GG~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 111 (390)
++.||.+.-. .+ .+.+||+.+..-..+.. +.. ..+++...+...-.. ....++.+|+.+.+++.
T Consensus 24 ~~~l~~~d~~-~~-------~i~~~d~~~~~~~~~~~-~~~-----~~~i~~~~dG~l~v~--~~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 24 SNSLLFVDIP-AK-------KVCRWDSFTKQVQRVTM-DAP-----VSSVALRQSGGYVAT--IGTKFCALNWKEQSAVV 87 (297)
T ss_dssp TTEEEEEETT-TT-------EEEEEETTTCCEEEEEC-SSC-----EEEEEEBTTSSEEEE--ETTEEEEEETTTTEEEE
T ss_pred CCEEEEEECC-CC-------EEEEEECCCCcEEEEeC-CCc-----eEEEEECCCCCEEEE--ECCeEEEEECCCCcEEE
Confidence 3566666644 22 67889988776544332 111 112222221111111 12368888888877766
Q ss_pred CCCCCC--cCCCceEEEE--CCEEEEEecCCC-----CCCCCCeEEEEeCCCCceeec-CCCCCCCCCcceEEEEe--CC
Q 016413 112 MPSAPV--PRLDGAAIQI--KNLFYVFAGYGS-----LDYVHSHVDVYNFTDNKWVDR-FDMPKDMAHSHLGVVSD--GR 179 (390)
Q Consensus 112 ~~~~~~--~R~~~~~~~~--~~~lyv~GG~~~-----~~~~~~~v~~yd~~~~~W~~~-~~l~~~~~r~~~~~~~~--~~ 179 (390)
+..... +......+.+ ++++|+..-... .......++++|+.. +...+ ..+.. ..+++.. +.
T Consensus 88 ~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~-----pngi~~spdg~ 161 (297)
T 3g4e_A 88 LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDI-----SNGLDWSLDHK 161 (297)
T ss_dssp EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESB-----EEEEEECTTSC
T ss_pred EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeecccc-----ccceEEcCCCC
Confidence 544321 1111122222 567777421111 011234689998864 33322 22211 1233332 44
Q ss_pred EEEEEeceeCCCCCCCCceEEEEEC--CCCCeEe---CCCCCCCCCC-ceEEE-ECCEEEEEccCCCCCCCCCcceEEee
Q 016413 180 YIYIVSGQYGPQCRGPTSRTFVLDS--ETRKWDS---IPPLPSPRYS-PATQL-WRGRLHVMGGSKENRHTPGLEHWSIA 252 (390)
Q Consensus 180 ~iyv~GG~~~~~~~~~~~~v~~yd~--~~~~W~~---~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~ 252 (390)
.||+.... ...+++||. .+..... +..++..... ..+++ -++.|||..... ..+.+|+
T Consensus 162 ~lyv~~~~--------~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~-----~~v~~~d-- 226 (297)
T 3g4e_A 162 IFYYIDSL--------SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG-----GRVIRLD-- 226 (297)
T ss_dssp EEEEEEGG--------GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT-----TEEEEEC--
T ss_pred EEEEecCC--------CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC-----CEEEEEc--
Confidence 68887532 356788875 4444321 1112111111 12333 257888875321 1244454
Q ss_pred eeccccccCCeEEccCCCCCCCceeEEEEC----CEEEEEcCCC
Q 016413 253 VKDGKALEKAWRTEIPIPRGGPHRACFVFN----DRLFVVGGQE 292 (390)
Q Consensus 253 ~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~----~~iyv~GG~~ 292 (390)
+.+.+....-.+|... ..++.++ +.|||.....
T Consensus 227 -----~~tG~~~~~i~~p~~~--~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 227 -----PVTGKRLQTVKLPVDK--TTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp -----TTTCCEEEEEECSSSB--EEEEEEESGGGCEEEEEEBCT
T ss_pred -----CCCceEEEEEECCCCC--ceEEEEeCCCCCEEEEEcCCc
Confidence 5556655444455332 3445553 4788886543
No 173
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=88.12 E-value=2.1 Score=37.65 Aligned_cols=66 Identities=8% Similarity=-0.065 Sum_probs=40.8
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
++.||++.-.. ..+.+||+.+++-.... ++. +.. +++. -++.+|+.. ...+.+||+++
T Consensus 24 ~~~l~~~d~~~------~~i~~~d~~~~~~~~~~-~~~---~~~-~i~~~~dG~l~v~~----------~~~l~~~d~~~ 82 (297)
T 3g4e_A 24 SNSLLFVDIPA------KKVCRWDSFTKQVQRVT-MDA---PVS-SVALRQSGGYVATI----------GTKFCALNWKE 82 (297)
T ss_dssp TTEEEEEETTT------TEEEEEETTTCCEEEEE-CSS---CEE-EEEEBTTSSEEEEE----------TTEEEEEETTT
T ss_pred CCEEEEEECCC------CEEEEEECCCCcEEEEe-CCC---ceE-EEEECCCCCEEEEE----------CCeEEEEECCC
Confidence 46788876432 46999999987654332 221 212 2333 356666642 24688999998
Q ss_pred CCeEeCCC
Q 016413 207 RKWDSIPP 214 (390)
Q Consensus 207 ~~W~~~~~ 214 (390)
.+++.+..
T Consensus 83 g~~~~~~~ 90 (297)
T 3g4e_A 83 QSAVVLAT 90 (297)
T ss_dssp TEEEEEEE
T ss_pred CcEEEEEe
Confidence 88877654
No 174
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=88.03 E-value=8.8 Score=34.13 Aligned_cols=23 Identities=17% Similarity=0.222 Sum_probs=14.8
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCc
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK 156 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~ 156 (390)
+++.++.||.++ .+..||+....
T Consensus 129 ~~~~l~s~~~d~------~i~~wd~~~~~ 151 (343)
T 2xzm_R 129 DNRQILSAGAER------EIKLWNILGEC 151 (343)
T ss_dssp STTEEEEEETTS------CEEEEESSSCE
T ss_pred CCCEEEEEcCCC------EEEEEeccCCc
Confidence 456677777663 37778876443
No 175
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=87.90 E-value=2.8 Score=38.46 Aligned_cols=100 Identities=8% Similarity=0.079 Sum_probs=53.0
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-CCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
+++.++.|+.++ .+.+||..+.+-... +... ...-.+++.. ++..++.|+.+ ..+.+||..+
T Consensus 134 dg~~l~s~~~d~------~i~iwd~~~~~~~~~--~~~h-~~~v~~~~~~p~~~~l~s~s~d--------~~v~iwd~~~ 196 (393)
T 1erj_A 134 DGKFLATGAEDR------LIRIWDIENRKIVMI--LQGH-EQDIYSLDYFPSGDKLVSGSGD--------RTVRIWDLRT 196 (393)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEE--ECCC-SSCEEEEEECTTSSEEEEEETT--------SEEEEEETTT
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcEEEE--EccC-CCCEEEEEEcCCCCEEEEecCC--------CcEEEEECCC
Confidence 567778887763 488899887764332 1110 1112233332 45556666532 4577888887
Q ss_pred CCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEe
Q 016413 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
.+....-... ..-.+++.. ++++++.|+.+ ..+..|++
T Consensus 197 ~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~s~d-----~~v~iwd~ 236 (393)
T 1erj_A 197 GQCSLTLSIE--DGVTTVAVSPGDGKYIAAGSLD-----RAVRVWDS 236 (393)
T ss_dssp TEEEEEEECS--SCEEEEEECSTTCCEEEEEETT-----SCEEEEET
T ss_pred CeeEEEEEcC--CCcEEEEEECCCCCEEEEEcCC-----CcEEEEEC
Confidence 6543321111 111122222 56777777754 35677774
No 176
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=87.86 E-value=24 Score=35.48 Aligned_cols=239 Identities=16% Similarity=0.195 Sum_probs=119.9
Q ss_pred CCCeEECCCCCCcCCCceEEEE-C--CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCC---CCcceEEEEe--
Q 016413 106 DLEWEQMPSAPVPRLDGAAIQI-K--NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM---AHSHLGVVSD-- 177 (390)
Q Consensus 106 ~~~W~~~~~~~~~R~~~~~~~~-~--~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~---~r~~~~~~~~-- 177 (390)
..+|+.+.+....-.-.++++. . +.||+.. .. ..+++.+-...+|+.+.+.+... .....++++.
T Consensus 10 ~~~w~~~~~~~~~g~i~~i~~~p~~~~~~~~~~-~~------ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~ 82 (737)
T 2cn3_A 10 PYKWDNVVIGGGGGFMPGIVFNETEKDLIYARA-AI------GGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPV 82 (737)
T ss_dssp CEEEEEECCCSBCSCCCEEEECSSSTTCEEEEC-SS------SCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSS
T ss_pred CCeeEEcccCCCcceeeEEEECCCCCCEEEEEe-cC------CcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCC
Confidence 4579888754332122333332 2 4677733 11 23899998999999986633210 0122344443
Q ss_pred -CCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCC-CCC-----CC-CCceEEEE---CCEEEEEccCCCCCCCCCc
Q 016413 178 -GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP-LPS-----PR-YSPATQLW---RGRLHVMGGSKENRHTPGL 246 (390)
Q Consensus 178 -~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~-~p~-----~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~ 246 (390)
.+.||+..|............+++-.-.-.+|+++.. .+. .+ ..+.+++. .+.||+... .+ .
T Consensus 83 ~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~-~g------~ 155 (737)
T 2cn3_A 83 DPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR-CG------N 155 (737)
T ss_dssp STTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS-TT------C
T ss_pred CCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec-cC------C
Confidence 3578887653111100012446665555678998752 211 12 22444443 256666431 10 1
Q ss_pred ceEEeeeeccccccCCeEEccCCCCCCC--------------ceeEEEEC----------CEEEEEcCCCCCCCCCCCCC
Q 016413 247 EHWSIAVKDGKALEKAWRTEIPIPRGGP--------------HRACFVFN----------DRLFVVGGQEGDFMAKPGSP 302 (390)
Q Consensus 247 ~~~~~~~~~~~~~~~~W~~~~~~p~~~~--------------~~~~~~~~----------~~iyv~GG~~~~~~~~~~~~ 302 (390)
..|... ....+|+.+..+|.... +...+.++ +.||+.-+..+
T Consensus 156 gl~~S~-----DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~--------- 221 (737)
T 2cn3_A 156 GLWRST-----DYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKN--------- 221 (737)
T ss_dssp CEEEES-----STTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSS---------
T ss_pred cEEEeC-----CCCcceecccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCC---------
Confidence 233221 24568998876553211 11223332 25665422111
Q ss_pred ccccccccceecCcEEeeC-CCCCeEECCCCCCCCCcceeEEEEE-CCEEEEEcCCCCCCCcceeeEEeeeEEEeecCcc
Q 016413 303 IFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHIECAWVIV-NNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSL 380 (390)
Q Consensus 303 ~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 380 (390)
..+++=. ...+|+.+..+|.... ...++.. ++.+|+..+........ .....+++++....
T Consensus 222 ------------~~v~~S~DgG~tW~~~~~~p~~~~--~~~~~~~~~~~l~~~~~d~~g~y~~---~~~g~v~~s~d~G~ 284 (737)
T 2cn3_A 222 ------------ESIYRSTDGGVTWKAVPGQPKGLL--PHHGVLASNGMLYITYGDTCGPYDG---NGKGQVWKFNTRTG 284 (737)
T ss_dssp ------------CCEEEESSTTSCCEECTTCCCSSE--EEEEEECTTSEEEEEEESSCCSSCC---SCCEEEEEEETTTC
T ss_pred ------------ccEEEEcCCCCceEECCCCCCccc--ceEEEECCCCeEEEEecCCCCcccc---ccCceEEEEeCCCC
Confidence 1155443 5679999986665322 1222222 78888875432110000 01236899999999
Q ss_pred ceeeccCCC
Q 016413 381 VIIYHYRPP 389 (390)
Q Consensus 381 ~W~~v~~~P 389 (390)
+|+.+...|
T Consensus 285 tW~~i~~~~ 293 (737)
T 2cn3_A 285 EWIDITPIP 293 (737)
T ss_dssp CEEECCSSC
T ss_pred CEEEccCCC
Confidence 999987665
No 177
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=87.62 E-value=21 Score=35.29 Aligned_cols=18 Identities=11% Similarity=-0.114 Sum_probs=13.5
Q ss_pred CceEEEEECCCCCeEeCC
Q 016413 196 TSRTFVLDSETRKWDSIP 213 (390)
Q Consensus 196 ~~~v~~yd~~~~~W~~~~ 213 (390)
...++++|..+.+-..+.
T Consensus 234 ~~~l~~~d~~~~~~~~~~ 251 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQ 251 (706)
T ss_dssp EEEEEEEETTTTEEEECC
T ss_pred eeEEEEEECCCCceEeec
Confidence 467999999887765554
No 178
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=86.79 E-value=5.1 Score=33.41 Aligned_cols=53 Identities=15% Similarity=0.148 Sum_probs=30.7
Q ss_pred EEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEe--C----CCCCCCCCCceEEEE--CCEEEEEccC
Q 016413 173 GVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDS--I----PPLPSPRYSPATQLW--RGRLHVMGGS 237 (390)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~--~----~~~p~~r~~~~~~~~--~~~iyv~GG~ 237 (390)
+++..++++|+|=| ..+|+++.....+.. + +.+|.. --++... ++++|+|=|.
T Consensus 28 Ai~~~~g~~y~Fkg----------~~~wr~~~~~~~~~p~~I~~~wp~Lp~~--iDAa~~~~~~~~iyfFkG~ 88 (207)
T 1pex_A 28 AITSLRGETMIFKD----------RFFWRLHPQQVDAELFLTKSFWPELPNR--IDAAYEHPSHDLIFIFRGR 88 (207)
T ss_dssp EEEEETTEEEEEET----------TEEEEECSSSSCCEEEEHHHHCTTSCSS--CCEEEEETTTTEEEEEETT
T ss_pred EEEeCCCcEEEEEC----------CEEEEEeCCCcCCCceehhHhccCCCCC--ccEEEEeccCCcEEEEccC
Confidence 45568999999965 447777765544322 1 134422 1123333 5899999764
No 179
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=86.76 E-value=21 Score=35.55 Aligned_cols=28 Identities=14% Similarity=0.111 Sum_probs=18.6
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD 162 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~ 162 (390)
+++.++++.. ..++++|+.+.+...+..
T Consensus 162 DG~~la~~~~-------~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 162 KGGFVSFIRG-------RNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp TSSEEEEEET-------TEEEEEETTTTEEEECCC
T ss_pred CCCEEEEEeC-------CcEEEEecCCCCEEEecc
Confidence 5555555432 269999999888776644
No 180
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=86.66 E-value=30 Score=35.20 Aligned_cols=234 Identities=13% Similarity=0.172 Sum_probs=117.0
Q ss_pred CCCeEECCCCCCcCCCceEEEE---CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCC---CCCcceEEEEe--
Q 016413 106 DLEWEQMPSAPVPRLDGAAIQI---KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKD---MAHSHLGVVSD-- 177 (390)
Q Consensus 106 ~~~W~~~~~~~~~R~~~~~~~~---~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~---~~r~~~~~~~~-- 177 (390)
..+|+.+.+....| -.++++. .+.+|+. +.. .-+++-+-...+|+.+...+.+ ..+...++++.
T Consensus 3 ~~~W~~~~~~~~g~-i~~i~~~p~~~~~~~a~-~~~------ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~ 74 (789)
T 1sqj_A 3 HYEFKNVAIGGGGY-ITGIVAHPKTKDLLYAR-TDI------GGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPN 74 (789)
T ss_dssp -CEEEECCCCBCSC-EEEEEECSSSTTCEEEE-ESS------SCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETT
T ss_pred cccceEccCCCCCc-EEEEEECCCCCCEEEEE-ecC------CCEEEecCCCCCeeECccCCCcccccCCceeEEEECCC
Confidence 35799887633222 2223322 2446653 322 1378877788999997653211 11334455553
Q ss_pred -CCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCC-CCC-----CC-CCceEEEE---CCEEEEEccCCCCCCCCCc
Q 016413 178 -GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP-LPS-----PR-YSPATQLW---RGRLHVMGGSKENRHTPGL 246 (390)
Q Consensus 178 -~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~-~p~-----~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~ 246 (390)
.+.||+..|..... ....+++-+-.-.+|+++.. .+. .| ..+.+++. .+.+|+. ... .
T Consensus 75 ~~~~i~~~~g~~~~~---~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g-~~~-------~ 143 (789)
T 1sqj_A 75 NPDRLYLAQGRYVGD---EWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMG-TRT-------E 143 (789)
T ss_dssp EEEEEEEEECSCTTS---SCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEE-CSS-------S
T ss_pred CCCEEEEEeCccCCC---cccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEE-ecc-------C
Confidence 25688876532101 11456665556678998852 221 22 22344444 3456663 311 1
Q ss_pred ceEEeeeeccccccCCeEEccCCCC---CCCceeEEEE----CCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEe
Q 016413 247 EHWSIAVKDGKALEKAWRTEIPIPR---GGPHRACFVF----NDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYM 319 (390)
Q Consensus 247 ~~~~~~~~~~~~~~~~W~~~~~~p~---~~~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 319 (390)
.+|... ....+|+.+..+|. .......+.+ .+.||+...... .+++
T Consensus 144 gl~~S~-----DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~----------------------~v~~ 196 (789)
T 1sqj_A 144 GIWKSS-----DRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQ----------------------GMYV 196 (789)
T ss_dssp CEEEES-----STTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESSTT----------------------CEEE
T ss_pred CEEEEC-----CCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCCC----------------------eEEE
Confidence 233321 25678999875442 1122233333 245666543211 1554
Q ss_pred eC-CCCCeEECCCCCCCC----------------CcceeEEEEECCEEEEEcCCCCCCCcceeeEEeeeEEEeecCccce
Q 016413 320 LD-DEMKWKVLPPMPKPN----------------SHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLVI 382 (390)
Q Consensus 320 yd-~~~~W~~~~~~~~~~----------------~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W 382 (390)
=. ...+|+.+..++... ..+..++...++.||+..+........ ....+++.+-...+|
T Consensus 197 S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g----~~g~l~~S~DgG~tW 272 (789)
T 1sqj_A 197 THDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGV----TFGEVWRQNRTSGAW 272 (789)
T ss_dssp ESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSSCC----CCCCEEEEETTTCCE
T ss_pred EcCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCCCCCC----CCceEEEEeCCCCce
Confidence 43 567999987554321 002222112278888874321100000 112588888888999
Q ss_pred eeccCCC
Q 016413 383 IYHYRPP 389 (390)
Q Consensus 383 ~~v~~~P 389 (390)
+.+...|
T Consensus 273 ~~~~~~~ 279 (789)
T 1sqj_A 273 DDITPRV 279 (789)
T ss_dssp EECCCCT
T ss_pred EECcCCC
Confidence 9887544
No 181
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=86.15 E-value=2.3 Score=39.65 Aligned_cols=20 Identities=20% Similarity=0.203 Sum_probs=13.5
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCC
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTD 154 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~ 154 (390)
+.+++.|+.++ .|.+||..+
T Consensus 141 ~~~lat~~~dg------~V~vwd~~~ 160 (430)
T 2xyi_A 141 ACVIATKTPSS------DVLVFDYTK 160 (430)
T ss_dssp EEEEEEECSSS------CEEEEEGGG
T ss_pred CcEEEEECCCC------cEEEEECCC
Confidence 46777777653 377888764
No 182
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=85.69 E-value=9.9 Score=36.39 Aligned_cols=61 Identities=8% Similarity=-0.044 Sum_probs=31.5
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
+++.++.|+.++ .+..||.....-..+..... . -.+++. -+++.++.|+.+ ..+..||...
T Consensus 355 ~g~~l~~~~~dg------~v~~~~~~~~~~~~~~~~~~---~-v~~~~~s~dg~~l~~~~~d--------~~v~~~~~~~ 416 (577)
T 2ymu_A 355 DGQTIASASDDK------TVKLWNRNGQLLQTLTGHSS---S-VRGVAFSPDGQTIASASDD--------KTVKLWNRNG 416 (577)
T ss_dssp TSSEEEEEETTS------EEEEEETTCCEEEEEECCSS---C-EEEEEECTTSSCEEEEETT--------SEEEEECTTC
T ss_pred CCCEEEEEeCCC------EEEEEcCCCCEEEEecCCCC---C-eEEEEECCCCCEEEEEeCC--------CEEEEEeCCC
Confidence 566777776553 47778865554443322211 1 112222 356666666532 3466777543
No 183
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=85.60 E-value=12 Score=32.87 Aligned_cols=99 Identities=10% Similarity=0.068 Sum_probs=47.5
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-------CCEEEEEeceeCCCCCCCCceEE
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-------GRYIYIVSGQYGPQCRGPTSRTF 200 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-------~~~iyv~GG~~~~~~~~~~~~v~ 200 (390)
++.+++.|+.++ .+.+||+....-..+..-.. .-.++... ++.+++.|+.+ ..+.
T Consensus 118 ~~~~l~s~s~D~------~i~vwd~~~~~~~~~~~h~~----~v~~~~~~~~~~~~~~~~~l~s~~~d--------~~i~ 179 (319)
T 3frx_A 118 KASMIISGSRDK------TIKVWTIKGQCLATLLGHND----WVSQVRVVPNEKADDDSVTIISAGND--------KMVK 179 (319)
T ss_dssp TSCEEEEEETTS------CEEEEETTSCEEEEECCCSS----CEEEEEECCC------CCEEEEEETT--------SCEE
T ss_pred CCCEEEEEeCCC------eEEEEECCCCeEEEEeccCC----cEEEEEEccCCCCCCCccEEEEEeCC--------CEEE
Confidence 467788888764 37778876554333221111 11122221 23355666543 3477
Q ss_pred EEECCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEe
Q 016413 201 VLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 201 ~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
.||..+.+-.. .+.........+.+ ++++++.|+.+ ..+..|++
T Consensus 180 ~wd~~~~~~~~--~~~~h~~~v~~~~~sp~g~~l~s~~~d-----g~i~iwd~ 225 (319)
T 3frx_A 180 AWNLNQFQIEA--DFIGHNSNINTLTASPDGTLIASAGKD-----GEIMLWNL 225 (319)
T ss_dssp EEETTTTEEEE--EECCCCSCEEEEEECTTSSEEEEEETT-----CEEEEEET
T ss_pred EEECCcchhhe--eecCCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEEC
Confidence 78876643221 11111111112222 56677777654 35677774
No 184
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=85.52 E-value=8.6 Score=37.20 Aligned_cols=91 Identities=10% Similarity=0.046 Sum_probs=44.0
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEE-C-CEEEEEecCCCCCCCCCeEEEEeC--CCCceeecCCCCCCCCCcceE
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-K-NLFYVFAGYGSLDYVHSHVDVYNF--TDNKWVDRFDMPKDMAHSHLG 173 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~-~-~~lyv~GG~~~~~~~~~~v~~yd~--~~~~W~~~~~l~~~~~r~~~~ 173 (390)
.+..+|..+.+-.. .++....-|.++.. + .+||+.+ .+ +.|.+||+ .+.+- +..++. ...-..
T Consensus 160 ~V~v~D~~t~~~~~--~i~~g~~~~~v~~spdg~~l~v~~-~d------~~V~v~D~~~~t~~~--~~~i~~--g~~p~~ 226 (543)
T 1nir_A 160 QIALVDGDSKKIVK--VIDTGYAVHISRMSASGRYLLVIG-RD------ARIDMIDLWAKEPTK--VAEIKI--GIEARS 226 (543)
T ss_dssp EEEEEETTTCCEEE--EEECSTTEEEEEECTTSCEEEEEE-TT------SEEEEEETTSSSCEE--EEEEEC--CSEEEE
T ss_pred eEEEEECCCceEEE--EEecCcccceEEECCCCCEEEEEC-CC------CeEEEEECcCCCCcE--EEEEec--CCCcce
Confidence 56666766654322 11111112344333 3 3566654 32 46999999 55442 333332 122233
Q ss_pred EEEe-----CC-EEEEEeceeCCCCCCCCceEEEEECCCCCe
Q 016413 174 VVSD-----GR-YIYIVSGQYGPQCRGPTSRTFVLDSETRKW 209 (390)
Q Consensus 174 ~~~~-----~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W 209 (390)
+++. ++ .+|+.. .. ...+.++|..+.+-
T Consensus 227 va~sp~~~~dg~~l~v~~-~~-------~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 227 VESSKFKGYEDRYTIAGA-YW-------PPQFAIMDGETLEP 260 (543)
T ss_dssp EEECCSTTCTTTEEEEEE-EE-------SSEEEEEETTTCCE
T ss_pred EEeCCCcCCCCCEEEEEE-cc-------CCeEEEEecccccc
Confidence 4443 44 555543 21 34577888877543
No 185
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=85.49 E-value=17 Score=31.30 Aligned_cols=87 Identities=11% Similarity=0.011 Sum_probs=50.4
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCCC
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (390)
+.||+++..+ ..+.+||+.++ .+.+.. +. ..-.+++. -++++|+... ....+.+||+.+.
T Consensus 40 ~~l~~~~~~~------~~i~~~~~~~~-~~~~~~-~~---~~~~~l~~~~dg~l~v~~~--------~~~~i~~~d~~~g 100 (296)
T 3e5z_A 40 SAVIFSDVRQ------NRTWAWSDDGQ-LSPEMH-PS---HHQNGHCLNKQGHLIACSH--------GLRRLERQREPGG 100 (296)
T ss_dssp TEEEEEEGGG------TEEEEEETTSC-EEEEES-SC---SSEEEEEECTTCCEEEEET--------TTTEEEEECSTTC
T ss_pred CEEEEEeCCC------CEEEEEECCCC-eEEEEC-CC---CCcceeeECCCCcEEEEec--------CCCeEEEEcCCCC
Confidence 3588887543 35999999987 554432 21 12233444 3677887652 1356899999888
Q ss_pred CeEeCCCCC----CCCCCceEEEECCEEEEE
Q 016413 208 KWDSIPPLP----SPRYSPATQLWRGRLHVM 234 (390)
Q Consensus 208 ~W~~~~~~p----~~r~~~~~~~~~~~iyv~ 234 (390)
+.+.+.... ..+-...++.-+++||+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 101 EWESIADSFEGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp CEEEEECEETTEECCCCCCEEECTTSCEEEE
T ss_pred cEEEEeeccCCCCCCCCCCEEECCCCCEEEE
Confidence 876653211 111122233336788886
No 186
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=85.37 E-value=7.9 Score=33.77 Aligned_cols=76 Identities=16% Similarity=0.205 Sum_probs=38.0
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCC--CCcceEEEE--eCCEEEEEeceeCCC-CCC--CCceEEE
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM--AHSHLGVVS--DGRYIYIVSGQYGPQ-CRG--PTSRTFV 201 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~--~r~~~~~~~--~~~~iyv~GG~~~~~-~~~--~~~~v~~ 201 (390)
..+|+.+..+ ..+.++|+.+.+-...-..+.+. ...-..++. .+..||+.....+.. ... ....+.+
T Consensus 46 ~~l~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v 119 (337)
T 1pby_B 46 RIAYATVNKS------ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVAL 119 (337)
T ss_dssp SEEEEEETTT------TEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEE
T ss_pred CEEEEEeCCC------CeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEE
Confidence 3677776532 46999999887644321221100 001112333 244777764221100 000 1377999
Q ss_pred EECCCCCeE
Q 016413 202 LDSETRKWD 210 (390)
Q Consensus 202 yd~~~~~W~ 210 (390)
||+.+.+..
T Consensus 120 ~d~~~~~~~ 128 (337)
T 1pby_B 120 YDAETLSRR 128 (337)
T ss_dssp EETTTTEEE
T ss_pred EECCCCcEE
Confidence 999876543
No 187
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=85.18 E-value=13 Score=33.26 Aligned_cols=128 Identities=14% Similarity=0.052 Sum_probs=61.9
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEE--CCE-EEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEE
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNL-FYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGV 174 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~--~~~-lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~ 174 (390)
.++.+|..+.+...+.. ........... +++ |+.... .........++.+|+.+..+..+.. ..+ .......
T Consensus 169 ~l~~~d~~~g~~~~~~~--~~~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~-~~~-~~~~~~~ 243 (396)
T 3c5m_A 169 RLIKVDIETGELEVIHQ--DTAWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKE-HAE-GESCTHE 243 (396)
T ss_dssp EEEEEETTTCCEEEEEE--ESSCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSC-CCT-TEEEEEE
T ss_pred eEEEEECCCCcEEeecc--CCcccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeec-cCC-Cccccce
Confidence 56677776666554432 11111222222 244 444432 2211122469999998888777654 211 1111122
Q ss_pred EE-eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEE-CCEEEEEcc
Q 016413 175 VS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGG 236 (390)
Q Consensus 175 ~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG 236 (390)
+. -+++.+++....... ....++++|+.+.+.+.+...+. .. ....- +++++++.+
T Consensus 244 ~~spdg~~l~~~~~~~~~---~~~~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKGQ---TDRVIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp EECTTSSCEEEEEEETTT---CCEEEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEE
T ss_pred EECCCCCEEEEEecCCCC---ccceEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEec
Confidence 22 245433343333221 13459999998887776654432 11 22233 666666654
No 188
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=85.09 E-value=9.7 Score=34.21 Aligned_cols=63 Identities=3% Similarity=-0.103 Sum_probs=35.3
Q ss_pred CeEEEEeCCCCceeecCCCCCCCCCcceEEEEe--CCE-EEEEeceeCCCCCCCCceEEEEECCCCCeEeCCC
Q 016413 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRY-IYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP 214 (390)
Q Consensus 145 ~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 214 (390)
..++.+|+.+.+...+...+ ......+.. ++. |+.... .... .....++.+|..+..++.+..
T Consensus 168 ~~l~~~d~~~g~~~~~~~~~----~~~~~~~~sp~dg~~l~~~~~-~~~~--~~~~~l~~~d~~~~~~~~l~~ 233 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQDT----AWLGHPIYRPFDDSTVGFCHE-GPHD--LVDARMWLVNEDGSNVRKIKE 233 (396)
T ss_dssp EEEEEEETTTCCEEEEEEES----SCEEEEEEETTEEEEEEEEEC-SCSS--SCSCCCEEEETTSCCCEESSC
T ss_pred ceEEEEECCCCcEEeeccCC----cccccceECCCCCCEEEEEec-CCCC--CCCceEEEEECCCCceeEeec
Confidence 46899999988876654321 112222222 344 444432 1110 113579999998888777754
No 189
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=84.37 E-value=11 Score=33.80 Aligned_cols=108 Identities=10% Similarity=-0.001 Sum_probs=54.6
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcc-eEEE-
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSH-LGVV- 175 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~-~~~~- 175 (390)
.++.+|..+.+-..+...+..........-+++.+++...+ ..++++|+.+.+-..+...+.. ... ...+
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~------~~l~~~d~~~g~~~~~~~~~~~--~~~~~~~~~ 132 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG------RNLMRVDLATLEENVVYQVPAE--WVGYGTWVA 132 (388)
T ss_dssp EEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT------TEEEEEETTTCCEEEEEECCTT--EEEEEEEEE
T ss_pred eEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC------CeEEEEECCCCcceeeeechhh--cccccceeE
Confidence 57777877777666655443222122233355444444432 3689999998876655544431 111 1111
Q ss_pred EeCCEEEEEeceeCCC--------------CCCCCceEEEEECCCCCeEeCC
Q 016413 176 SDGRYIYIVSGQYGPQ--------------CRGPTSRTFVLDSETRKWDSIP 213 (390)
Q Consensus 176 ~~~~~iyv~GG~~~~~--------------~~~~~~~v~~yd~~~~~W~~~~ 213 (390)
.-++++++.--..... .......++++|+.+.+-+.+.
T Consensus 133 ~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 184 (388)
T 3pe7_A 133 NSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL 184 (388)
T ss_dssp CTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE
T ss_pred CCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee
Confidence 2244433321111000 0012478999999887765554
No 190
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=84.33 E-value=23 Score=31.97 Aligned_cols=24 Identities=4% Similarity=0.014 Sum_probs=16.4
Q ss_pred CCEEEEEeceeCCCCCCCCceEEEEECCCCCe
Q 016413 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKW 209 (390)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W 209 (390)
++.+++.|+.+ ..+.+||..+...
T Consensus 93 ~~~~l~s~s~d--------g~v~vw~~~~~~~ 116 (402)
T 2aq5_A 93 NDNVIASGSED--------CTVMVWEIPDGGL 116 (402)
T ss_dssp CTTEEEEEETT--------SEEEEEECCTTCC
T ss_pred CCCEEEEEeCC--------CeEEEEEccCCCC
Confidence 56778887643 4578888877643
No 191
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=83.88 E-value=22 Score=32.90 Aligned_cols=64 Identities=11% Similarity=0.040 Sum_probs=33.4
Q ss_pred CceEEEEEC--C-CCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCC--CCCCcceEEeeeeccccccCCeE
Q 016413 196 TSRTFVLDS--E-TRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENR--HTPGLEHWSIAVKDGKALEKAWR 264 (390)
Q Consensus 196 ~~~v~~yd~--~-~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~--~~~~~~~~~~~~~~~~~~~~~W~ 264 (390)
...+.+||. . ...++.+..++....-.+++...+.+++..+..... ....+..|.+. ..+++|+
T Consensus 329 d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~-----~~~~~~~ 397 (450)
T 2vdu_B 329 TKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN-----LNENSFV 397 (450)
T ss_dssp CSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE-----TTTTEEE
T ss_pred CCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE-----cCCCeEE
Confidence 355777877 3 344555544433323334556667788776653221 13345555542 4555664
No 192
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=83.64 E-value=17 Score=32.22 Aligned_cols=102 Identities=10% Similarity=0.084 Sum_probs=47.4
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCce-----eecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEE
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKW-----VDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFV 201 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W-----~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~ 201 (390)
++.+++.|+.++ .+.++|+.+..- .....+... ...-.+++. -++.+.+.|+.+ ..+..
T Consensus 38 d~~~l~sgs~D~------~v~iWd~~~~~~~~~~~~~~~~l~~h-~~~V~~~~~~~~~~~l~s~s~D--------~~v~l 102 (343)
T 2xzm_R 38 DSPVLISGSRDK------TVMIWKLYEEEQNGYFGIPHKALTGH-NHFVSDLALSQENCFAISSSWD--------KTLRL 102 (343)
T ss_dssp CCCEEEEEETTS------CEEEEEECSSCCSSBSEEEEEEECCC-SSCEEEEEECSSTTEEEEEETT--------SEEEE
T ss_pred CCCEEEEEcCCC------EEEEEECCcCCcccccccccchhccC-CCceEEEEECCCCCEEEEEcCC--------CcEEE
Confidence 556888888774 366666654321 111111110 011122222 245566666643 45778
Q ss_pred EECCCCCeEeCCCCCCCCCC-ceEEE-ECCEEEEEccCCCCCCCCCcceEEe
Q 016413 202 LDSETRKWDSIPPLPSPRYS-PATQL-WRGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 202 yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
||..+.+-... +...... .+++. -+++.++.||.+ ..+..|++
T Consensus 103 wd~~~~~~~~~--~~~h~~~v~~v~~sp~~~~l~s~~~d-----~~i~~wd~ 147 (343)
T 2xzm_R 103 WDLRTGTTYKR--FVGHQSEVYSVAFSPDNRQILSAGAE-----REIKLWNI 147 (343)
T ss_dssp EETTSSCEEEE--EECCCSCEEEEEECSSTTEEEEEETT-----SCEEEEES
T ss_pred EECCCCcEEEE--EcCCCCcEEEEEECCCCCEEEEEcCC-----CEEEEEec
Confidence 88877653221 1111111 12222 245566666653 35677775
No 193
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=83.14 E-value=13 Score=32.73 Aligned_cols=83 Identities=14% Similarity=0.083 Sum_probs=44.1
Q ss_pred ceEEEE--CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCC--CCCCcceEEEEe--CCEEEEEeceeCCCC---
Q 016413 122 GAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPK--DMAHSHLGVVSD--GRYIYIVSGQYGPQC--- 192 (390)
Q Consensus 122 ~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~--~~~r~~~~~~~~--~~~iyv~GG~~~~~~--- 192 (390)
++++.. ++.|||.-.. ..+.++|+.+...+.+..... +. ..-..+++. ++.||+.-.......
T Consensus 83 ~gi~~~~~~g~l~v~d~~-------~~i~~~d~~~g~~~~~~~~~~~~~~-~~p~~i~~d~~~G~l~v~d~~~~~~~~~~ 154 (322)
T 2fp8_A 83 YDISYNLQNNQLYIVDCY-------YHLSVVGSEGGHATQLATSVDGVPF-KWLYAVTVDQRTGIVYFTDVSTLYDDRGV 154 (322)
T ss_dssp EEEEEETTTTEEEEEETT-------TEEEEECTTCEECEEEESEETTEEC-SCEEEEEECTTTCCEEEEESCSSCCTTCH
T ss_pred ceEEEcCCCCcEEEEECC-------CCEEEEeCCCCEEEEecccCCCCcc-cccceEEEecCCCEEEEECCccccccccc
Confidence 344444 5789987422 237889988776555432111 11 122334443 578998742110000
Q ss_pred ------CCCCceEEEEECCCCCeEeC
Q 016413 193 ------RGPTSRTFVLDSETRKWDSI 212 (390)
Q Consensus 193 ------~~~~~~v~~yd~~~~~W~~~ 212 (390)
......+++||+.+.+.+.+
T Consensus 155 ~~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 155 QQIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp HHHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred ceehcccCCCceEEEEeCCCCEEEEe
Confidence 01236799999987765543
No 194
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=83.06 E-value=41 Score=33.80 Aligned_cols=226 Identities=14% Similarity=0.180 Sum_probs=113.2
Q ss_pred cccccccCCCCeEECCCCCCcC----CCceEEEEC----CEEEEEecCCCC-CCC-CCeEEEEeCCCCceeecCC-CC--
Q 016413 98 TFADLPAPDLEWEQMPSAPVPR----LDGAAIQIK----NLFYVFAGYGSL-DYV-HSHVDVYNFTDNKWVDRFD-MP-- 164 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R----~~~~~~~~~----~~lyv~GG~~~~-~~~-~~~v~~yd~~~~~W~~~~~-l~-- 164 (390)
.+++.+-...+|+.+...+..+ .....+.++ +.||+..|.... ... ...+++=.=...+|+.+.. .+
T Consensus 46 gv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~ 125 (737)
T 2cn3_A 46 GAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMG 125 (737)
T ss_dssp CEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCC
T ss_pred cEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccC
Confidence 5777777788999987643221 122333333 579988663211 111 1335554445678998642 11
Q ss_pred --CCCCC-cceEEEEe---CCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCC--------------CceE
Q 016413 165 --KDMAH-SHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRY--------------SPAT 224 (390)
Q Consensus 165 --~~~~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~--------------~~~~ 224 (390)
.| .+ ..+.+++. .+.||+-.. .+ ..+++=+-...+|+++..+|.... +...
T Consensus 126 ~~~~-g~~~~~~l~~~p~~~~~v~~g~~-~g-------~gl~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~ 196 (737)
T 2cn3_A 126 GNMP-GRSMGERLAIDPNDNRILYLGTR-CG-------NGLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVW 196 (737)
T ss_dssp TTST-TTTSCCCEEECSSCTTCEEEECS-TT-------CCEEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEE
T ss_pred CCcC-cccccceEEECCCCCCEEEEeec-cC-------CcEEEeCCCCcceecccCCCCCcccccCcccccccCCCCEEE
Confidence 11 12 12345543 356666321 00 235554444578999986654211 1122
Q ss_pred EEEC----------CEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeEEEE-CCEEEEEcCCCC
Q 016413 225 QLWR----------GRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF-NDRLFVVGGQEG 293 (390)
Q Consensus 225 ~~~~----------~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~ 293 (390)
+.++ +.||+.-... ....|... ....+|+.+..+|.....+.++.. ++.+|+..+...
T Consensus 197 v~~dp~~~~~~~~~~~v~~~~~~~------~~~v~~S~-----DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~ 265 (737)
T 2cn3_A 197 VVFDKSSSTPGNPTKTIYVGVADK------NESIYRST-----DGGVTWKAVPGQPKGLLPHHGVLASNGMLYITYGDTC 265 (737)
T ss_dssp EEECGGGSCTTSCCSCEEEEESCS------SCCEEEES-----STTSCCEECTTCCCSSEEEEEEECTTSEEEEEEESSC
T ss_pred EEcCCCCcccCCCCCEEEEEecCC------CccEEEEc-----CCCCceEECCCCCCcccceEEEECCCCeEEEEecCCC
Confidence 3332 2666653211 01123211 256789999877765432333322 778888654211
Q ss_pred CCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCCCC--CCcceeEEEEE----CCEEEEEcCC
Q 016413 294 DFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKP--NSHIECAWVIV----NNSIIITGGT 356 (390)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~--~~~~~~~~~~~----~~~l~v~GG~ 356 (390)
.- +.. .....+++++ ...+|+.+...|.. ..++..+.+.+ .+.||+.+..
T Consensus 266 g~--------y~~-----~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~~ 322 (737)
T 2cn3_A 266 GP--------YDG-----NGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSMN 322 (737)
T ss_dssp CS--------SCC-----SCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEEC
T ss_pred Cc--------ccc-----ccCceEEEEeCCCCCEEEccCCCCCCcccccccccEEEcCCCCCEEEEEecc
Confidence 00 000 0113488888 77899999876543 12222222333 2567777643
No 195
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=83.05 E-value=22 Score=31.32 Aligned_cols=66 Identities=11% Similarity=0.027 Sum_probs=41.8
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCCC
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK 208 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 208 (390)
+.+|+++-.. ..+++||+.+++...+. ++. .....+..-++++++... ..+++||+.+.+
T Consensus 61 ~~l~~~d~~~------~~i~~~d~~~~~~~~~~-~~~---~v~~i~~~~dg~l~v~~~----------~gl~~~d~~~g~ 120 (326)
T 2ghs_A 61 GTAWWFNILE------RELHELHLASGRKTVHA-LPF---MGSALAKISDSKQLIASD----------DGLFLRDTATGV 120 (326)
T ss_dssp TEEEEEEGGG------TEEEEEETTTTEEEEEE-CSS---CEEEEEEEETTEEEEEET----------TEEEEEETTTCC
T ss_pred CEEEEEECCC------CEEEEEECCCCcEEEEE-CCC---cceEEEEeCCCeEEEEEC----------CCEEEEECCCCc
Confidence 6788886442 36999999988765432 221 222222335788887541 348999998888
Q ss_pred eEeCCC
Q 016413 209 WDSIPP 214 (390)
Q Consensus 209 W~~~~~ 214 (390)
.+.+..
T Consensus 121 ~~~~~~ 126 (326)
T 2ghs_A 121 LTLHAE 126 (326)
T ss_dssp EEEEEC
T ss_pred EEEEee
Confidence 876644
No 196
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=82.99 E-value=37 Score=33.17 Aligned_cols=201 Identities=9% Similarity=-0.112 Sum_probs=92.5
Q ss_pred CeEEEEeCC--C-CceeecCCCCCC--CCCcceEEEEeCCEEEEEeceeCC--CCCCCCceEEEEECCC------CCeEe
Q 016413 145 SHVDVYNFT--D-NKWVDRFDMPKD--MAHSHLGVVSDGRYIYIVSGQYGP--QCRGPTSRTFVLDSET------RKWDS 211 (390)
Q Consensus 145 ~~v~~yd~~--~-~~W~~~~~l~~~--~~r~~~~~~~~~~~iyv~GG~~~~--~~~~~~~~v~~yd~~~------~~W~~ 211 (390)
..++.+|.. + ..-..+...+.. ..+.......-+++.+++...+.. ........++++|..+ ..-+.
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 181 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE 181 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE
Confidence 458999987 4 665666554311 012222222235554455444311 0001246899999988 66666
Q ss_pred CC-CCCCCCCCceEEEECCEEEEEccCCCCC-C--CCCcceEEeeeeccccc-cC---CeEEccCCCCCCCceeEEE-EC
Q 016413 212 IP-PLPSPRYSPATQLWRGRLHVMGGSKENR-H--TPGLEHWSIAVKDGKAL-EK---AWRTEIPIPRGGPHRACFV-FN 282 (390)
Q Consensus 212 ~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~--~~~~~~~~~~~~~~~~~-~~---~W~~~~~~p~~~~~~~~~~-~~ 282 (390)
+. .-.. ........-+++..++....... . ...+..|++ . +. +...+..-.. ......+. -+
T Consensus 182 l~~~~~~-~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~-------~~~g~~~~~~~l~~~~~-~~~~~~~~spd 252 (662)
T 3azo_A 182 LSDDAHR-FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARV-------TEDGRFADTRTLLGGPE-EAIAQAEWAPD 252 (662)
T ss_dssp SSCSCSS-EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEE-------CTTSCEEEEEEEEEETT-BCEEEEEECTT
T ss_pred EEecCCC-cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEE-------CCCCcccccEEeCCCCC-ceEcceEECCC
Confidence 54 2211 11111222345444443322211 0 123444443 3 34 2333322111 11112222 26
Q ss_pred CEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCCCCC----Ccc-eeEEEEE-CCEEEEEcC
Q 016413 283 DRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPN----SHI-ECAWVIV-NNSIIITGG 355 (390)
Q Consensus 283 ~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~----~~~-~~~~~~~-~~~l~v~GG 355 (390)
++||+.+..++. ..++.+| .+.+++.+....... -.. ...++.. ++++++.+.
T Consensus 253 g~l~~~~~~~~~--------------------~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~ 312 (662)
T 3azo_A 253 GSLIVATDRTGW--------------------WNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG 312 (662)
T ss_dssp SCEEEEECTTSS--------------------CEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB
T ss_pred CeEEEEECCCCC--------------------eEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEE
Confidence 777777654431 2499998 577888775432211 000 0112333 677777665
Q ss_pred CCCCCCcceeeEEeeeEEEeecCccceeec
Q 016413 356 TTEKHPMTKRMILVGEVFQFHLDSLVIIYH 385 (390)
Q Consensus 356 ~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v 385 (390)
. +.. .+|.+|+++.....+
T Consensus 313 ~-~~~----------~l~~~d~~~~~~~~l 331 (662)
T 3azo_A 313 K-GAA----------VLGILDPESGELVDA 331 (662)
T ss_dssp S-SSC----------EEEEEETTTTEEEEC
T ss_pred c-Ccc----------EEEEEECCCCcEEEe
Confidence 5 332 477778776655554
No 197
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=82.84 E-value=25 Score=31.06 Aligned_cols=23 Identities=9% Similarity=0.109 Sum_probs=16.2
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCc
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK 156 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~ 156 (390)
++.+++.||.++ .+.+||..+.+
T Consensus 47 d~~~l~sg~~Dg------~v~iwd~~~~~ 69 (343)
T 3lrv_A 47 DKWVCMCRCEDG------ALHFTQLKDSK 69 (343)
T ss_dssp EEEEEEEEEETT------EEEEEEESSSS
T ss_pred CCCEEEEECCCC------cEEEEECCCCc
Confidence 567888888774 47777776654
No 198
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=82.55 E-value=23 Score=30.46 Aligned_cols=149 Identities=7% Similarity=-0.033 Sum_probs=69.9
Q ss_pred EEEEecCCCCCCCccccceeeeeccCCCceEeecCCCCCccccccceEEEecCCCchhHHHhhhcccccccCCCCeEECC
Q 016413 34 FMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQMP 113 (390)
Q Consensus 34 ~l~~~GG~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 113 (390)
.||+++.. .+ .+.+||+.+. ...+...... ..+++.-.+...-....-...+..+|+.+.+.+.+.
T Consensus 41 ~l~~~~~~-~~-------~i~~~~~~~~-~~~~~~~~~~-----~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 41 AVIFSDVR-QN-------RTWAWSDDGQ-LSPEMHPSHH-----QNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIA 106 (296)
T ss_dssp EEEEEEGG-GT-------EEEEEETTSC-EEEEESSCSS-----EEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEE
T ss_pred EEEEEeCC-CC-------EEEEEECCCC-eEEEECCCCC-----cceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEe
Confidence 36666644 33 6788998877 5554432211 122222211111111111235788888777766553
Q ss_pred CCC-Cc---CCCceEEEECCEEEEE----ecCCC-------CCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-e
Q 016413 114 SAP-VP---RLDGAAIQIKNLFYVF----AGYGS-------LDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-D 177 (390)
Q Consensus 114 ~~~-~~---R~~~~~~~~~~~lyv~----GG~~~-------~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~ 177 (390)
... .. +....++.-++++|+. |..+. .......++++|+. .+...+..-. ....+++. -
T Consensus 107 ~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~----~~~~gi~~s~ 181 (296)
T 3e5z_A 107 DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR----VKPNGLAFLP 181 (296)
T ss_dssp CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC----SSEEEEEECT
T ss_pred eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC----CCCccEEECC
Confidence 211 11 1112222236788886 43210 11112479999987 5544432211 11123333 3
Q ss_pred CCEEEEEeceeCCCCCCCCceEEEEECC-CCCe
Q 016413 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSE-TRKW 209 (390)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~-~~~W 209 (390)
++++++... ....+++||+. +.+.
T Consensus 182 dg~~lv~~~--------~~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 182 SGNLLVSDT--------GDNATHRYCLNARGET 206 (296)
T ss_dssp TSCEEEEET--------TTTEEEEEEECSSSCE
T ss_pred CCCEEEEeC--------CCCeEEEEEECCCCcC
Confidence 565654432 13578888876 3444
No 199
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=82.15 E-value=39 Score=32.84 Aligned_cols=26 Identities=8% Similarity=0.071 Sum_probs=18.2
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceee
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD 159 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~ 159 (390)
+++.++.|+.++ .+..+|..+..-..
T Consensus 335 dg~~l~s~s~D~------~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 335 DGKTLFSADAEG------HINSWDISTGISNR 360 (611)
T ss_dssp TSSEEEEEETTS------CEEEEETTTCCEEE
T ss_pred CCCEEEEEeCCC------cEEEEECCCCceee
Confidence 566777777764 47888988776544
No 200
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=81.77 E-value=19 Score=31.22 Aligned_cols=67 Identities=10% Similarity=0.022 Sum_probs=32.7
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCce---eecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEEC
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKW---VDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W---~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (390)
+++++.||.|+ .+.++|+.+.+- .....+... ...-.+++. -++.+++.|+.+ ..+..++.
T Consensus 51 ~~~l~S~s~D~------~i~vWd~~~~~~~~~~~~~~l~~h-~~~V~~~~~s~dg~~l~s~~~d--------~~i~~~~~ 115 (340)
T 4aow_A 51 PDMILSASRDK------TIIMWKLTRDETNYGIPQRALRGH-SHFVSDVVISSDGQFALSGSWD--------GTLRLWDL 115 (340)
T ss_dssp TTEEEEEETTS------CEEEEEECCSSSCSEEEEEEECCC-SSCEEEEEECTTSSEEEEEETT--------SEEEEEET
T ss_pred CCEEEEEcCCC------eEEEEECCCCCcccceeeEEEeCC-CCCEEEEEECCCCCEEEEEccc--------ccceEEee
Confidence 46888888774 366666554432 111112110 011112222 356667777643 34666776
Q ss_pred CCCCeE
Q 016413 205 ETRKWD 210 (390)
Q Consensus 205 ~~~~W~ 210 (390)
......
T Consensus 116 ~~~~~~ 121 (340)
T 4aow_A 116 TTGTTT 121 (340)
T ss_dssp TTTEEE
T ss_pred ccccee
Confidence 665443
No 201
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=81.50 E-value=13 Score=33.78 Aligned_cols=93 Identities=15% Similarity=0.194 Sum_probs=44.3
Q ss_pred CCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCC-ceEEEE-CCEEEEEccCCCCCCCCCcceEEeeeec
Q 016413 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYS-PATQLW-RGRLHVMGGSKENRHTPGLEHWSIAVKD 255 (390)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~ 255 (390)
+++.++.|+.+ ..+.+||..+.+-... +...... .+++.. ++..++.|+.+ ..+..|++
T Consensus 134 dg~~l~s~~~d--------~~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~---- 194 (393)
T 1erj_A 134 DGKFLATGAED--------RLIRIWDIENRKIVMI--LQGHEQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDL---- 194 (393)
T ss_dssp TSSEEEEEETT--------SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEET----
T ss_pred CCCEEEEEcCC--------CeEEEEECCCCcEEEE--EccCCCCEEEEEEcCCCCEEEEecCC-----CcEEEEEC----
Confidence 56777777643 3477888877643221 1111111 122222 44555666543 35677774
Q ss_pred cccccCCeEEccCCCCCCCceeEEEE--CCEEEEEcCCCCC
Q 016413 256 GKALEKAWRTEIPIPRGGPHRACFVF--NDRLFVVGGQEGD 294 (390)
Q Consensus 256 ~~~~~~~W~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~ 294 (390)
.+.+-......... ...++.. ++++++.|+.++.
T Consensus 195 ---~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~s~d~~ 230 (393)
T 1erj_A 195 ---RTGQCSLTLSIEDG--VTTVAVSPGDGKYIAAGSLDRA 230 (393)
T ss_dssp ---TTTEEEEEEECSSC--EEEEEECSTTCCEEEEEETTSC
T ss_pred ---CCCeeEEEEEcCCC--cEEEEEECCCCCEEEEEcCCCc
Confidence 33332221111111 1122222 5678888887653
No 202
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=81.35 E-value=30 Score=31.04 Aligned_cols=169 Identities=7% Similarity=-0.025 Sum_probs=77.4
Q ss_pred eEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCc--
Q 016413 146 HVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSP-- 222 (390)
Q Consensus 146 ~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-- 222 (390)
.+.++|+.+.+-........ .-.+++. -++++++.++ .+.+.+++..+..-.............
T Consensus 158 ~i~iwd~~~~~~~~~~~~~~----~V~~v~fspdg~~l~s~s---------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 224 (365)
T 4h5i_A 158 IMRIIDPSDLTEKFEIETRG----EVKDLHFSTDGKVVAYIT---------GSSLEVISTVTGSCIARKTDFDKNWSLSK 224 (365)
T ss_dssp EEEEEETTTTEEEEEEECSS----CCCEEEECTTSSEEEEEC---------SSCEEEEETTTCCEEEEECCCCTTEEEEE
T ss_pred EEEEeECCCCcEEEEeCCCC----ceEEEEEccCCceEEecc---------ceeEEEEEeccCcceeeeecCCCCCCEEE
Confidence 58889998876543322111 1223333 3566666664 233666777666543322211111111
Q ss_pred eEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEc--cCCCCCCCceeEE--EECCEEEEEcCCCCCCCCC
Q 016413 223 ATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTE--IPIPRGGPHRACF--VFNDRLFVVGGQEGDFMAK 298 (390)
Q Consensus 223 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~--~~~p~~~~~~~~~--~~~~~iyv~GG~~~~~~~~ 298 (390)
.+..-++..++.++.+... ...+..|++ ........ ..+......-.++ .-++++++.|+.++.
T Consensus 225 v~fspdg~~l~~~s~d~~~-~~~i~~~~~-------~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~---- 292 (365)
T 4h5i_A 225 INFIADDTVLIAASLKKGK-GIVLTKISI-------KSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNS---- 292 (365)
T ss_dssp EEEEETTEEEEEEEESSSC-CEEEEEEEE-------ETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSC----
T ss_pred EEEcCCCCEEEEEecCCcc-eeEEeeccc-------ccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCE----
Confidence 1223477777777654321 112334443 22222211 1111111111222 236788888887653
Q ss_pred CCCCccccccccceecCcEEeeC-CCCCeEECCCC-CCCCCcceeEEEEECCEEEEEcCCCCC
Q 016413 299 PGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPM-PKPNSHIECAWVIVNNSIIITGGTTEK 359 (390)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~-~~~~~~~~~~~~~~~~~l~v~GG~~~~ 359 (390)
|.+|| .+.+ .+..+ ..........+...++++++.|+.++.
T Consensus 293 ------------------V~iwd~~~~~--~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~t 335 (365)
T 4h5i_A 293 ------------------IALVKLKDLS--MSKIFKQAHSFAITEVTISPDSTYVASVSAANT 335 (365)
T ss_dssp ------------------EEEEETTTTE--EEEEETTSSSSCEEEEEECTTSCEEEEEETTSE
T ss_pred ------------------EEEEECCCCc--EEEEecCcccCCEEEEEECCCCCEEEEEeCCCe
Confidence 88888 5432 22221 111111112122337888888887644
No 203
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=80.77 E-value=18 Score=35.87 Aligned_cols=65 Identities=11% Similarity=0.030 Sum_probs=33.2
Q ss_pred CEEEEEecCCCCCCCCCeEEEEeCCCCc--eee-cCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEEC
Q 016413 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVD-RFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (390)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~-~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (390)
..+++.|+.++ .+.++|+.+.. +.. ...+... ...-.+++. -++.+.+.|+.+ ..+.+||.
T Consensus 395 ~~~l~s~s~D~------~i~~W~~~~~~~~~~~~~~~~~~h-~~~v~~v~~s~~g~~l~sgs~D--------g~v~vwd~ 459 (694)
T 3dm0_A 395 ADIIVSASRDK------SIILWKLTKDDKAYGVAQRRLTGH-SHFVEDVVLSSDGQFALSGSWD--------GELRLWDL 459 (694)
T ss_dssp CSEEEEEETTS------EEEEEECCCSTTCSCEEEEEEECC-SSCEEEEEECTTSSEEEEEETT--------SEEEEEET
T ss_pred CCEEEEEeCCC------cEEEEEccCCCcccccccceecCC-CCcEEEEEECCCCCEEEEEeCC--------CcEEEEEC
Confidence 36788888764 47777766532 111 0111110 011122222 356677777643 45778888
Q ss_pred CCCC
Q 016413 205 ETRK 208 (390)
Q Consensus 205 ~~~~ 208 (390)
.+..
T Consensus 460 ~~~~ 463 (694)
T 3dm0_A 460 AAGV 463 (694)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 7654
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=80.66 E-value=39 Score=33.76 Aligned_cols=196 Identities=11% Similarity=0.083 Sum_probs=94.4
Q ss_pred CeEEEEeCCCCce--eecCCCCCCCCCcceEEE-EeCCEEEEEeceeCCCCCCCCceEEEEECCCC--C-eEeCCCCCCC
Q 016413 145 SHVDVYNFTDNKW--VDRFDMPKDMAHSHLGVV-SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR--K-WDSIPPLPSP 218 (390)
Q Consensus 145 ~~v~~yd~~~~~W--~~~~~l~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~--~-W~~~~~~p~~ 218 (390)
.+++++++.+..- ..+...+.. +....++. .-+++..++...+... ..++++.+|..+. . |+.+.+-...
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~-~~~~~~~~~SpDG~~l~~~~~~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPEL-PKRGHGASVSSDGRWVVITSSEGTD---PVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTC-TTCEEEEEECTTSCEEEEEEECTTC---SCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CEEEEEECCCCchhCEEEeccCCC-CeEEEEEEECCCCCEEEEEEEccCC---CcceEEEEECCCCCCcccEEecCCCCc
Confidence 4688888876652 122222211 11222333 2355444444333211 2578999998876 6 8877543222
Q ss_pred CCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeecccccc--CCeEEccCCCCCCCceeEEEECCEEEEEcCCCCCCC
Q 016413 219 RYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALE--KAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFM 296 (390)
Q Consensus 219 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~--~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~ 296 (390)
... .+...++.||+..-... ....+..+++ .+ ..|+.+.+-.... -..+...+++|++....++.
T Consensus 319 ~~~-~~~~dg~~l~~~s~~~~--~~~~l~~~d~-------~~~~~~~~~l~~~~~~~-l~~~~~~~~~lv~~~~~dg~-- 385 (741)
T 1yr2_A 319 QWD-FVDGVGDQLWFVSGDGA--PLKKIVRVDL-------SGSTPRFDTVVPESKDN-LESVGIAGNRLFASYIHDAK-- 385 (741)
T ss_dssp CEE-EEEEETTEEEEEECTTC--TTCEEEEEEC-------SSSSCEEEEEECCCSSE-EEEEEEEBTEEEEEEEETTE--
T ss_pred eEE-EEeccCCEEEEEECCCC--CCCEEEEEeC-------CCCccccEEEecCCCCe-EEEEEEECCEEEEEEEECCE--
Confidence 211 22346777887754321 1223444442 33 4688775432211 12344558888877655432
Q ss_pred CCCCCCccccccccceecCcEEeeC-CCCCeEECCCCCCCCCcceeEEEE--ECCEEEEEcCCCCCCCcceeeEEeeeEE
Q 016413 297 AKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHIECAWVI--VNNSIIITGGTTEKHPMTKRMILVGEVF 373 (390)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~~~~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~v~ 373 (390)
..++.+| ....-..++ +|... . ...+. -+++.+++...+.. .-.+++
T Consensus 386 ------------------~~l~~~~~~g~~~~~l~-~~~~~--~-v~~~~~s~d~~~l~~~~ss~~--------~P~~i~ 435 (741)
T 1yr2_A 386 ------------------SQVLAFDLDGKPAGAVS-LPGIG--S-ASGLSGRPGDRHAYLSFSSFT--------QPATVL 435 (741)
T ss_dssp ------------------EEEEEEETTSCEEEECB-CSSSC--E-EEEEECCBTCSCEEEEEEETT--------EEEEEE
T ss_pred ------------------EEEEEEeCCCCceeecc-CCCCe--E-EEEeecCCCCCEEEEEEcCCC--------CCCEEE
Confidence 2478887 444333332 22211 1 11111 13332332222222 234799
Q ss_pred EeecCccceeeccC
Q 016413 374 QFHLDSLVIIYHYR 387 (390)
Q Consensus 374 ~yd~~~~~W~~v~~ 387 (390)
.||+.+++...+..
T Consensus 436 ~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 436 ALDPATAKTTPWEP 449 (741)
T ss_dssp EEETTTTEEEECSC
T ss_pred EEECCCCcEEEEec
Confidence 99998877666543
No 205
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=80.50 E-value=23 Score=29.30 Aligned_cols=95 Identities=13% Similarity=0.168 Sum_probs=49.1
Q ss_pred ceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCceee--c----CCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCC
Q 016413 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD--R----FDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRG 194 (390)
Q Consensus 122 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~--~----~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~ 194 (390)
-+++.+++++|+|=|. .+|+++.....+.. + +.||. .-.++... .++++|+|=|
T Consensus 27 DAi~~~~g~~y~Fkg~--------~~wr~~~~~~~~~p~~I~~~wp~Lp~---~iDAa~~~~~~~~iyfFkG-------- 87 (207)
T 1pex_A 27 DAITSLRGETMIFKDR--------FFWRLHPQQVDAELFLTKSFWPELPN---RIDAAYEHPSHDLIFIFRG-------- 87 (207)
T ss_dssp SEEEEETTEEEEEETT--------EEEEECSSSSCCEEEEHHHHCTTSCS---SCCEEEEETTTTEEEEEET--------
T ss_pred eEEEeCCCcEEEEECC--------EEEEEeCCCcCCCceehhHhccCCCC---CccEEEEeccCCcEEEEcc--------
Confidence 3455679999999653 36777654433211 1 23342 22322222 2689999976
Q ss_pred CCceEEEEECCCCCe---EeCCCCCCCC--CCceEEE-E--CCEEEEEccC
Q 016413 195 PTSRTFVLDSETRKW---DSIPPLPSPR--YSPATQL-W--RGRLHVMGGS 237 (390)
Q Consensus 195 ~~~~v~~yd~~~~~W---~~~~~~p~~r--~~~~~~~-~--~~~iyv~GG~ 237 (390)
+.+|+|+..+..- +.+..+-.|. ..--+|. . ++++|+|-|.
T Consensus 88 --~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG~ 136 (207)
T 1pex_A 88 --RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGN 136 (207)
T ss_dssp --TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEETT
T ss_pred --CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeCC
Confidence 4567776432211 2333222222 1223333 2 4799999763
No 206
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=79.69 E-value=32 Score=30.28 Aligned_cols=145 Identities=9% Similarity=0.051 Sum_probs=73.1
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCC-------CCCCCCcceEEEEe-C-CEEEEEeceeCCCCCCCCce
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDM-------PKDMAHSHLGVVSD-G-RYIYIVSGQYGPQCRGPTSR 198 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l-------~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~ 198 (390)
++.|||..++. ...+.+||+....-..+... +... ..-.++++. + +.|||.... ...
T Consensus 154 ~g~lyv~d~~~-----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~-~~p~gia~d~~~g~l~v~d~~--------~~~ 219 (329)
T 3fvz_A 154 TGAVFVSDGYC-----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQF-SVPHSLALVPHLDQLCVADRE--------NGR 219 (329)
T ss_dssp TCCEEEEECSS-----CCEEEEECTTSCEEEEECEECCSSSCCTTEE-SCEEEEEEETTTTEEEEEETT--------TTE
T ss_pred CCeEEEEeCCC-----CCeEEEEcCCCCEEEEeccCCCCCCCCCccc-CCCcEEEEECCCCEEEEEECC--------CCE
Confidence 57899997532 24589999765543333211 1111 123344543 3 899998632 467
Q ss_pred EEEEECCCCCeEeCCCC-CCCCCCceEEEECCEEEEEccCCC--CCCCCCcceEEeeeeccccccCCeEEc-cCCCCCCC
Q 016413 199 TFVLDSETRKWDSIPPL-PSPRYSPATQLWRGRLHVMGGSKE--NRHTPGLEHWSIAVKDGKALEKAWRTE-IPIPRGGP 274 (390)
Q Consensus 199 v~~yd~~~~~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~~~~~~~~~~~~~~W~~~-~~~p~~~~ 274 (390)
+.+||+.+.+....-.. .....-.+++...+.+|+..|... ......+..|+ ..+.+.... .+.+....
T Consensus 220 I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~-------~~~g~~~~~~~~~~~~~~ 292 (329)
T 3fvz_A 220 IQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMN-------FSSGEIIDVFKPVRKHFD 292 (329)
T ss_dssp EEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEE-------TTTCCEEEEECCSSSCCS
T ss_pred EEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEE-------cCCCeEEEEEcCCCCccC
Confidence 99999986665332211 122222234444577777776422 11223444554 244444332 22121111
Q ss_pred ce-eEEEE-CCEEEEEcCCCC
Q 016413 275 HR-ACFVF-NDRLFVVGGQEG 293 (390)
Q Consensus 275 ~~-~~~~~-~~~iyv~GG~~~ 293 (390)
.. ++++. ++.|||....++
T Consensus 293 ~p~~ia~~~dG~lyvad~~~~ 313 (329)
T 3fvz_A 293 MPHDIVASEDGTVYIGDAHTN 313 (329)
T ss_dssp SEEEEEECTTSEEEEEESSSC
T ss_pred CeeEEEECCCCCEEEEECCCC
Confidence 22 33332 568998876543
No 207
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=79.56 E-value=31 Score=30.05 Aligned_cols=95 Identities=6% Similarity=-0.035 Sum_probs=51.4
Q ss_pred hhcccccccCCCCeEECCCCCCcCCCceEEEE-CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEE
Q 016413 96 SATFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGV 174 (390)
Q Consensus 96 ~~~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~ 174 (390)
+..++.+|+... .......+ ..-++++.. +++|||...... ...+.++|+.+.+.+.+..++. .+.....
T Consensus 52 ~~~I~~~d~~g~-~~~~~~~~--~~p~gia~~~dG~l~vad~~~~----~~~v~~~d~~~g~~~~~~~~~~--~~~~~g~ 122 (306)
T 2p4o_A 52 VGEIVSITPDGN-QQIHATVE--GKVSGLAFTSNGDLVATGWNAD----SIPVVSLVKSDGTVETLLTLPD--AIFLNGI 122 (306)
T ss_dssp TTEEEEECTTCC-EEEEEECS--SEEEEEEECTTSCEEEEEECTT----SCEEEEEECTTSCEEEEEECTT--CSCEEEE
T ss_pred CCeEEEECCCCc-eEEEEeCC--CCceeEEEcCCCcEEEEeccCC----cceEEEEcCCCCeEEEEEeCCC--ccccCcc
Confidence 346777777653 22211111 112233332 567888753221 1248889988888776655543 2333343
Q ss_pred EE-eCCEEEEEeceeCCCCCCCCceEEEEECCCC
Q 016413 175 VS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (390)
Q Consensus 175 ~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (390)
+. .++.+|+.-- ....++++|+.+.
T Consensus 123 ~~~~~~~~~v~d~--------~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 123 TPLSDTQYLTADS--------YRGAIWLIDVVQP 148 (306)
T ss_dssp EESSSSEEEEEET--------TTTEEEEEETTTT
T ss_pred cccCCCcEEEEEC--------CCCeEEEEeCCCC
Confidence 33 4566777531 1457999998754
No 208
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=79.43 E-value=12 Score=37.26 Aligned_cols=33 Identities=9% Similarity=-0.129 Sum_probs=21.0
Q ss_pred CCEEEEEecC-CCCCCCCCeEEEEeCCCCceeecC
Q 016413 128 KNLFYVFAGY-GSLDYVHSHVDVYNFTDNKWVDRF 161 (390)
Q Consensus 128 ~~~lyv~GG~-~~~~~~~~~v~~yd~~~~~W~~~~ 161 (390)
+++.+++++. ++.. ...+++++|+.+.+...+.
T Consensus 47 dG~~la~~~~~d~~~-~~~~i~~~d~~~g~~~~~~ 80 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDR-NQLDLWSYDIGSGQTRLLV 80 (741)
T ss_dssp TSSEEEEEECCSSCT-TEEEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEeccCCCC-cccEEEEEECCCCceeEcc
Confidence 5565566554 4322 2347999999988876654
No 209
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=79.39 E-value=56 Score=32.98 Aligned_cols=202 Identities=14% Similarity=0.195 Sum_probs=104.4
Q ss_pred EEEEeCCCCceeecCC-C-----CCC--CCCcceEEEEe---CCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCC-C
Q 016413 147 VDVYNFTDNKWVDRFD-M-----PKD--MAHSHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP-P 214 (390)
Q Consensus 147 v~~yd~~~~~W~~~~~-l-----~~~--~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~-~ 214 (390)
+++-+-...+|+.+.. + +.. .....+++++. .+.+|+..|..... .....+++-+-.-.+|+++. +
T Consensus 45 v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~--~~~~~i~~S~DgG~TW~~~~~~ 122 (763)
T 3a0f_A 45 TYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQW--DPWAAFLVSDDRGKTFKQYRSP 122 (763)
T ss_dssp EEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTT--CSCCEEEEESSTTSSCEEEECS
T ss_pred EEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccC--CCCceEEEECCCCCCceeccCC
Confidence 7887778899999865 3 210 11223444432 36788876531111 11345666555567899885 2
Q ss_pred CC-----CCCCC-ceEEEE---CCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCC---CceeEEEE-
Q 016413 215 LP-----SPRYS-PATQLW---RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGG---PHRACFVF- 281 (390)
Q Consensus 215 ~p-----~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~---~~~~~~~~- 281 (390)
.+ ..|.. ..+++. .+.+|+.+- ....|... ....+|+.+..++... .....+.+
T Consensus 123 ~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~--------~~~l~~S~-----DgG~TW~~~~~~~~~~~~~~~~~~i~~~ 189 (763)
T 3a0f_A 123 VPMGANDMGRNGGERLAVNPHWTDELWFGSR--------TQGLWRST-----DRAQTWSRMNQLPDSSTYGIGIISVIFD 189 (763)
T ss_dssp SCCCTTSTTTTSBCCEEECTTSTTCEEEECS--------SSCEEEES-----STTSSCEECTTSCCCSCTTTCEEEEEEC
T ss_pred cccCccccCccccceEEECCCCCCEEEEEeC--------CCcEEEEC-----CCCcCccccccCcccCCCccceEEEEEC
Confidence 21 12221 234443 367777641 11233221 2567899987666432 22223333
Q ss_pred ---CCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCCCCC------------------Ccc
Q 016413 282 ---NDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPN------------------SHI 339 (390)
Q Consensus 282 ---~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~------------------~~~ 339 (390)
.+.||+.....+ .+++-+ ...+|+.+..++... ...
T Consensus 190 p~~~~~~~~~~~~~g----------------------~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 247 (763)
T 3a0f_A 190 PKNVGTAYVASHAVG----------------------GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPL 247 (763)
T ss_dssp SSSTTCEEEEESSTT----------------------CEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCE
T ss_pred CCCCCEEEEEEeCCC----------------------eEEEECCCCCCccccCCCccccccccccccccccccccCCCCc
Confidence 245776543211 155554 567999987555211 111
Q ss_pred eeEEEEE-CCEEEEEcCCCCCCCcceeeEEeeeEEEeecCccceeeccCCC
Q 016413 340 ECAWVIV-NNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLVIIYHYRPP 389 (390)
Q Consensus 340 ~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~P 389 (390)
...++.. ++.||+........... ....+++.+-...+|+.+...|
T Consensus 248 ~~~~~~~~~g~l~~~~~~~~~~~~~----~~g~v~rS~D~G~tW~~~~~~~ 294 (763)
T 3a0f_A 248 PIKIALGKNGRLYITYSDAPGPWGV----LYGEVWSYDPTNGNWKHITPSR 294 (763)
T ss_dssp EEEEEECTTSCEEEEEESSCSSSCC----CCEEEEEEETTTTEEEECCTTS
T ss_pred ceeEEECCCCcEEEEeccCCCCCCC----cceeEEEEeCCCCceEECCCCC
Confidence 1222222 67888874321100000 1125888888899999886554
No 210
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=79.31 E-value=12 Score=37.34 Aligned_cols=121 Identities=17% Similarity=0.216 Sum_probs=64.5
Q ss_pred eEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCC--------CCCceeEEEECCEEEEEcCCCCC
Q 016413 223 ATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPR--------GGPHRACFVFNDRLFVVGGQEGD 294 (390)
Q Consensus 223 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~--------~~~~~~~~~~~~~iyv~GG~~~~ 294 (390)
+-++.++.||+.... ..+..+|. ......|+.-...+. .....+.++.+++||+... ++
T Consensus 65 ~P~v~~g~vyv~~~~------~~v~AlD~-----~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-dg- 131 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPF------SVVYALDA-----RDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-DG- 131 (689)
T ss_dssp CCEEETTEEEEECGG------GCEEEEET-----TTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-TS-
T ss_pred cCEEECCEEEEEcCC------CeEEEEEC-----CCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-CC-
Confidence 345789999998642 23444442 134456876433221 1111245677888877642 22
Q ss_pred CCCCCCCCccccccccceecCcEEeeC-CCC--CeEECCC-CCCCCCcceeEEEEECCEEEEEcCCCCCCCcceeeEEee
Q 016413 295 FMAKPGSPIFKCSRRHEVVYGDVYMLD-DEM--KWKVLPP-MPKPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVG 370 (390)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~--~W~~~~~-~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 370 (390)
.++.+| .+. .|+.-.. -+........+.++.++.||+..+..... ...
T Consensus 132 ---------------------~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~-------~~g 183 (689)
T 1yiq_A 132 ---------------------RLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFG-------VRG 183 (689)
T ss_dssp ---------------------EEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTC-------CBC
T ss_pred ---------------------EEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccC-------CCC
Confidence 389999 543 7886442 11111122223356788888743322111 112
Q ss_pred eEEEeecCcc--ceee
Q 016413 371 EVFQFHLDSL--VIIY 384 (390)
Q Consensus 371 ~v~~yd~~~~--~W~~ 384 (390)
.++.||+++. .|..
T Consensus 184 ~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 184 YVTAYDAETGKEAWRF 199 (689)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCcEEEEe
Confidence 5889998775 4764
No 211
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=78.61 E-value=32 Score=29.77 Aligned_cols=87 Identities=15% Similarity=0.264 Sum_probs=45.7
Q ss_pred EEECCEEEEEecCCCCCCCCCeEEEEeCC-CCceeecCCCCCCCCCcceEEEEe-CCEEEEEeceeCCCCCCCCceEEEE
Q 016413 125 IQIKNLFYVFAGYGSLDYVHSHVDVYNFT-DNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVL 202 (390)
Q Consensus 125 ~~~~~~lyv~GG~~~~~~~~~~v~~yd~~-~~~W~~~~~l~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~y 202 (390)
++.++.||+.. .+ ..+.+||+. ...|......+ . ..+.+.. ++.||+... ...+++|
T Consensus 104 ~~~~~~l~v~t-~~------~~l~~~d~~g~~~~~~~~~~~----~-~~~~~~~~~g~l~vgt~---------~~~l~~~ 162 (330)
T 3hxj_A 104 TIFEDILYVTS-MD------GHLYAINTDGTEKWRFKTKKA----I-YATPIVSEDGTIYVGSN---------DNYLYAI 162 (330)
T ss_dssp EEETTEEEEEC-TT------SEEEEECTTSCEEEEEECSSC----C-CSCCEECTTSCEEEECT---------TSEEEEE
T ss_pred eEECCEEEEEe-cC------CEEEEEcCCCCEEEEEcCCCc----e-eeeeEEcCCCEEEEEcC---------CCEEEEE
Confidence 34488888743 21 358899987 33576532211 1 1122333 677777421 2568889
Q ss_pred ECCC-CCeEeCCCCCCCCCCceEEE-ECCEEEEEc
Q 016413 203 DSET-RKWDSIPPLPSPRYSPATQL-WRGRLHVMG 235 (390)
Q Consensus 203 d~~~-~~W~~~~~~p~~r~~~~~~~-~~~~iyv~G 235 (390)
|+.. ..|+.-.+ ... ..+.+. .++.||+..
T Consensus 163 d~~g~~~~~~~~~--~~~-~~~~~~d~~g~l~v~t 194 (330)
T 3hxj_A 163 NPDGTEKWRFKTN--DAI-TSAASIGKDGTIYFGS 194 (330)
T ss_dssp CTTSCEEEEEECS--SCC-CSCCEECTTCCEEEES
T ss_pred CCCCCEeEEEecC--CCc-eeeeEEcCCCEEEEEe
Confidence 9872 23655322 222 222333 367777764
No 212
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=78.44 E-value=14 Score=35.97 Aligned_cols=39 Identities=10% Similarity=0.056 Sum_probs=22.3
Q ss_pred CceEEEEECCCCCeEeCCCCCCCCCCceEEEE-C-CEEEEE
Q 016413 196 TSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-R-GRLHVM 234 (390)
Q Consensus 196 ~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~-~~iyv~ 234 (390)
...++..|........+..++.++..|....- + ..+|+.
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va 359 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITA 359 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEE
T ss_pred CCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEE
Confidence 56788888877665555444555555554433 2 344554
No 213
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=77.98 E-value=14 Score=35.68 Aligned_cols=59 Identities=10% Similarity=0.077 Sum_probs=35.4
Q ss_pred EEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCC
Q 016413 147 VDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP 214 (390)
Q Consensus 147 v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 214 (390)
+.+||+.+.+-..+...+. ...+ ..-+|+..++++.+... ...++++|+.+.+++.+..
T Consensus 134 ~~l~d~~~g~~~~l~~~~~----~~~~-~spDG~~la~~~~~~~~----~~~i~~~d~~~g~~~~l~~ 192 (582)
T 3o4h_A 134 VALYALDGGGLRELARLPG----FGFV-SDIRGDLIAGLGFFGGG----RVSLFTSNLSSGGLRVFDS 192 (582)
T ss_dssp EEEEEEETTEEEEEEEESS----CEEE-EEEETTEEEEEEEEETT----EEEEEEEETTTCCCEEECC
T ss_pred ceEEEccCCcEEEeecCCC----ceEE-ECCCCCEEEEEEEcCCC----CeEEEEEcCCCCCceEeec
Confidence 4478888887666543221 2222 22355555555544322 3569999999988887753
No 214
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=77.87 E-value=7.3 Score=36.79 Aligned_cols=53 Identities=11% Similarity=0.068 Sum_probs=28.8
Q ss_pred EEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEe--CC----CCCCCCCCceEEE--ECCEEEEEccC
Q 016413 173 GVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDS--IP----PLPSPRYSPATQL--WRGRLHVMGGS 237 (390)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~--~~----~~p~~r~~~~~~~--~~~~iyv~GG~ 237 (390)
+++..++++|+|=| ..+|+++.....+.. +. .+|.. -=++.. .++++|+|=|.
T Consensus 267 Ai~~~~ge~y~Fkg----------~~~wr~~~~~~~~~p~~I~~~Wp~LP~~--iDAa~~~~~~g~~~fFKg~ 327 (450)
T 1su3_A 267 AITTIRGEVMFFKD----------RFYMRTNPFYPEVELNFISVFWPQLPNG--LEAAYEFADRDEVRFFKGN 327 (450)
T ss_dssp EEEEETTEEEEEET----------TEEEECCTTSSSCEEEEGGGTCTTSCSS--CCEEEEEGGGTEEEEEETT
T ss_pred eEEecCCeEEEEeC----------CEEEEEcCCCCcccceehhHhccCCCCC--eeEEEEEcCCCeEEEEeCC
Confidence 55668999999976 335555554433321 11 23322 112223 26899998653
No 215
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=76.65 E-value=19 Score=30.94 Aligned_cols=83 Identities=10% Similarity=0.239 Sum_probs=40.9
Q ss_pred ceEEEEECCCCCeEeCCCCCCCCCCceEEE--ECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCC
Q 016413 197 SRTFVLDSETRKWDSIPPLPSPRYSPATQL--WRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGP 274 (390)
Q Consensus 197 ~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~ 274 (390)
+.|.++|.++.+-..+-.+......-..+. -+++.++.|+.+ ..+..|++ .+.+-.........
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D-----g~v~iw~~-------~~~~~~~~~~~h~~-- 110 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDV-------QQQKRLRNMTSHSA-- 110 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-----SEEEEEET-------TTTEEEEEEECCSS--
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC-----CcEEEeec-------CCceeEEEecCccc--
Confidence 457888988876654433222221112222 256777777754 35677774 33322111111111
Q ss_pred ceeEEEECCEEEEEcCCCC
Q 016413 275 HRACFVFNDRLFVVGGQEG 293 (390)
Q Consensus 275 ~~~~~~~~~~iyv~GG~~~ 293 (390)
...+....+.+++.|+..+
T Consensus 111 ~~~~~~~~~~~l~s~~~~~ 129 (318)
T 4ggc_A 111 RVGSLSWNSYILSSGSRSG 129 (318)
T ss_dssp CEEEEEEETTEEEEEETTS
T ss_pred eEEEeecCCCEEEEEecCC
Confidence 1234555666777776553
No 216
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=75.66 E-value=15 Score=35.83 Aligned_cols=123 Identities=15% Similarity=0.148 Sum_probs=63.7
Q ss_pred eEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCC--------CCCceeEEEECCEEEEEcCCCCC
Q 016413 223 ATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPR--------GGPHRACFVFNDRLFVVGGQEGD 294 (390)
Q Consensus 223 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~--------~~~~~~~~~~~~~iyv~GG~~~~ 294 (390)
+-++.++.||+....+ ..+.++|.. ......|+.-...+. .....+.++.+++||+... +
T Consensus 57 ~P~v~~g~vyv~~~~~-----~~v~AlD~~----~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-d-- 124 (571)
T 2ad6_A 57 APLVIGDMMYVHSAFP-----NNTYALNLN----DPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA-N-- 124 (571)
T ss_dssp CCEEETTEEEEECSTT-----TCEEEEETT----CTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-T--
T ss_pred ccEEECCEEEEEeCCC-----CEEEEEeCC----CCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-C--
Confidence 4457799999986521 234444420 134556876433221 0112245677898888743 1
Q ss_pred CCCCCCCCccccccccceecCcEEeeC-CCC--CeEECCCCCCCCCcceeEEEEECCEEEEEcCCCCCCCcceeeEEeee
Q 016413 295 FMAKPGSPIFKCSRRHEVVYGDVYMLD-DEM--KWKVLPPMPKPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGE 371 (390)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~--~W~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 371 (390)
..++.+| .+. .|+.-..-+........+.++.+++||+..+..+.. ....
T Consensus 125 --------------------g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~-------~~g~ 177 (571)
T 2ad6_A 125 --------------------GHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELG-------VRGA 177 (571)
T ss_dssp --------------------SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGT-------CCCE
T ss_pred --------------------CEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccC-------CCCE
Confidence 1389999 543 788532111100111122355688888765422111 1125
Q ss_pred EEEeecCc--cceee
Q 016413 372 VFQFHLDS--LVIIY 384 (390)
Q Consensus 372 v~~yd~~~--~~W~~ 384 (390)
++.||+++ ..|+.
T Consensus 178 v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 178 VNAFDLKTGELKWRA 192 (571)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCcEEEEE
Confidence 88899876 45753
No 217
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=75.13 E-value=43 Score=29.40 Aligned_cols=199 Identities=14% Similarity=0.067 Sum_probs=97.6
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCc--eeecCCCC-----CCCCCcceEEEEe--CCEEEEEeceeCCCCCCCCce
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMP-----KDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSR 198 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~l~-----~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 198 (390)
++.|||....+ ..+.+||+..+. -..+.... ...-..-..+++. ++.||+..++ ....
T Consensus 101 ~g~l~v~d~~~------~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~-------~~~~ 167 (329)
T 3fvz_A 101 DGNYWVTDVAL------HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY-------CNSR 167 (329)
T ss_dssp TSCEEEEETTT------TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS-------SCCE
T ss_pred CCCEEEEECCC------CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC-------CCCe
Confidence 56799876432 468999987652 22222110 0000122345554 6899999742 1456
Q ss_pred EEEEECCCCCeEeCCCC-------CCCCC-CceEEEE-C-CEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccC
Q 016413 199 TFVLDSETRKWDSIPPL-------PSPRY-SPATQLW-R-GRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIP 268 (390)
Q Consensus 199 v~~yd~~~~~W~~~~~~-------p~~r~-~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 268 (390)
+.+||+....-..+... +.... -..+++. + +.|||..... ..+.+|+ +.+.+....-.
T Consensus 168 I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~-----~~I~~~~-------~~~G~~~~~~~ 235 (329)
T 3fvz_A 168 IVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN-----GRIQCFK-------TDTKEFVREIK 235 (329)
T ss_dssp EEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT-----TEEEEEE-------TTTCCEEEEEC
T ss_pred EEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC-----CEEEEEE-------CCCCcEEEEEe
Confidence 88999655443333211 11111 2234443 3 7999996432 3466666 34455443322
Q ss_pred CC-CCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeE-ECCCCCCCCCcceeEE-E
Q 016413 269 IP-RGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWK-VLPPMPKPNSHIECAW-V 344 (390)
Q Consensus 269 ~p-~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~-~~~~~~~~~~~~~~~~-~ 344 (390)
.+ ......+.+...+.+|...|...-.. .....+.++| .+.+.. .+...+..... ..++ +
T Consensus 236 ~~~~~~~~~~~~~~pg~~~~~~g~~~v~~---------------~~~~~v~~~~~~~g~~~~~~~~~~~~~~~-p~~ia~ 299 (329)
T 3fvz_A 236 HASFGRNVFAISYIPGFLFAVNGKPYFGD---------------QEPVQGFVMNFSSGEIIDVFKPVRKHFDM-PHDIVA 299 (329)
T ss_dssp CTTTTTCEEEEEEETTEEEEEECCCCTTC---------------SCCCCEEEEETTTCCEEEEECCSSSCCSS-EEEEEE
T ss_pred ccccCCCcceeeecCCEEEEeCCCEEecc---------------CCCcEEEEEEcCCCeEEEEEcCCCCccCC-eeEEEE
Confidence 22 11222234444577777766432100 0123588888 554433 23221211111 1222 2
Q ss_pred EECCEEEEEcCCCCCCCcceeeEEeeeEEEeecCc
Q 016413 345 IVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDS 379 (390)
Q Consensus 345 ~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~ 379 (390)
.-+|.|||....++ .|++|+++.
T Consensus 300 ~~dG~lyvad~~~~------------~I~~~~~~~ 322 (329)
T 3fvz_A 300 SEDGTVYIGDAHTN------------TVWKFTLTE 322 (329)
T ss_dssp CTTSEEEEEESSSC------------CEEEEEEEE
T ss_pred CCCCCEEEEECCCC------------EEEEEeCCc
Confidence 34678999875443 377888754
No 218
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=74.99 E-value=37 Score=28.64 Aligned_cols=186 Identities=15% Similarity=0.065 Sum_probs=93.3
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe--CCEEEEEeceeCCCCCCCCceEEEEECC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (390)
+++||+.-.. ...+.++|+.+..-..+..... ..-.++++. ++.||+.-. ....+.++|+.
T Consensus 47 ~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~~~---~~p~~ia~d~~~~~lyv~d~--------~~~~I~~~~~~ 109 (267)
T 1npe_A 47 DKVVYWTDIS------EPSIGRASLHGGEPTTIIRQDL---GSPEGIALDHLGRTIFWTDS--------QLDRIEVAKMD 109 (267)
T ss_dssp TTEEEEEETT------TTEEEEEESSSCCCEEEECTTC---CCEEEEEEETTTTEEEEEET--------TTTEEEEEETT
T ss_pred CCEEEEEECC------CCEEEEEecCCCCcEEEEECCC---CCccEEEEEecCCeEEEEEC--------CCCEEEEEEcC
Confidence 5689987532 2469999988764333221111 122344443 689999853 14678899987
Q ss_pred CCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeEEEE--
Q 016413 206 TRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF-- 281 (390)
Q Consensus 206 ~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~-- 281 (390)
...-+.+.+... ..-..+++. +++||+...... ...+.++++ ....-+.+..... ....+.+..
T Consensus 110 g~~~~~~~~~~~-~~P~~i~vd~~~g~lyv~~~~~~---~~~I~~~~~-------dg~~~~~~~~~~~-~~P~gia~d~~ 177 (267)
T 1npe_A 110 GTQRRVLFDTGL-VNPRGIVTDPVRGNLYWTDWNRD---NPKIETSHM-------DGTNRRILAQDNL-GLPNGLTFDAF 177 (267)
T ss_dssp SCSCEEEECSSC-SSEEEEEEETTTTEEEEEECCSS---SCEEEEEET-------TSCCCEEEECTTC-SCEEEEEEETT
T ss_pred CCCEEEEEECCC-CCccEEEEeeCCCEEEEEECCCC---CcEEEEEec-------CCCCcEEEEECCC-CCCcEEEEcCC
Confidence 654333322111 111233343 689999853210 123333432 1222122221111 112234443
Q ss_pred CCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCe-EECCCCCCCCCcceeEEEEECCEEEEEcCCCCC
Q 016413 282 NDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKW-KVLPPMPKPNSHIECAWVIVNNSIIITGGTTEK 359 (390)
Q Consensus 282 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W-~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~ 359 (390)
+++||+.-... ..|+++| ....- ..+..+..| .+++.-++.||+.-..+
T Consensus 178 ~~~lyv~d~~~----------------------~~I~~~~~~g~~~~~~~~~~~~P-----~gi~~d~~~lyva~~~~-- 228 (267)
T 1npe_A 178 SSQLCWVDAGT----------------------HRAECLNPAQPGRRKVLEGLQYP-----FAVTSYGKNLYYTDWKT-- 228 (267)
T ss_dssp TTEEEEEETTT----------------------TEEEEEETTEEEEEEEEECCCSE-----EEEEEETTEEEEEETTT--
T ss_pred CCEEEEEECCC----------------------CEEEEEecCCCceEEEecCCCCc-----eEEEEeCCEEEEEECCC--
Confidence 56899886533 2388888 43211 122223232 23455688999964322
Q ss_pred CCcceeeEEeeeEEEeecCccc
Q 016413 360 HPMTKRMILVGEVFQFHLDSLV 381 (390)
Q Consensus 360 ~~~~~~~~~~~~v~~yd~~~~~ 381 (390)
+.|.++|+++.+
T Consensus 229 ----------~~v~~~d~~~g~ 240 (267)
T 1npe_A 229 ----------NSVIAMDLAISK 240 (267)
T ss_dssp ----------TEEEEEETTTTE
T ss_pred ----------CeEEEEeCCCCC
Confidence 148889987654
No 219
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=74.95 E-value=47 Score=33.26 Aligned_cols=133 Identities=12% Similarity=0.088 Sum_probs=67.8
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
++.|+++||... -+.+||+.+++++.+..-.......-.++.. .++.|++-. ..-+.+||+.+
T Consensus 482 ~g~lWi~~~t~~------Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt----------~~Gl~~~~~~~ 545 (758)
T 3ott_A 482 EGNVWVLLYNNK------GIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF----------HGGVMRINPKD 545 (758)
T ss_dssp TSCEEEEETTCS------SEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE----------TTEEEEECC--
T ss_pred CCCEEEEccCCC------CcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe----------cCceEEEecCC
Confidence 467998766541 2889999999988763211110111122222 357788642 13488899998
Q ss_pred CCeEeCC--CCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeEEEE-CC
Q 016413 207 RKWDSIP--PLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF-ND 283 (390)
Q Consensus 207 ~~W~~~~--~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~-~~ 283 (390)
++++... .+|.. .-.+++..++.|++.... .+.+|+ |.+.+..... ++...+..++... ++
T Consensus 546 ~~~~~~~~~gl~~~-~i~~i~~~~g~lWi~t~~-------Gl~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~~G 609 (758)
T 3ott_A 546 ESQQSISFGSFSNN-EILSMTCVKNSIWVSTTN-------GLWIID-------RKTMDARQQN-MTNKRFTSLLFDPKED 609 (758)
T ss_dssp CCCCBCCCCC---C-CEEEEEEETTEEEEEESS-------CEEEEE-------TTTCCEEEC---CCCCCSEEEEETTTT
T ss_pred CceEEecccCCCcc-ceEEEEECCCCEEEECCC-------CeEEEc-------CCCceeEEec-CCCCceeeeEEECCCC
Confidence 8876653 23322 223344457888887531 234444 5666555432 3333332222232 45
Q ss_pred EEEEEcCCCC
Q 016413 284 RLFVVGGQEG 293 (390)
Q Consensus 284 ~iyv~GG~~~ 293 (390)
+| .+||.++
T Consensus 610 ~l-~fG~~~G 618 (758)
T 3ott_A 610 CV-YLGGADG 618 (758)
T ss_dssp EE-EEECBSE
T ss_pred cE-EEecCCc
Confidence 54 5666655
No 220
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=74.87 E-value=33 Score=28.03 Aligned_cols=53 Identities=17% Similarity=0.319 Sum_probs=30.4
Q ss_pred EEEEeCCEEEEEeceeCCCCCCCCceEEEEECCC--CCeEe--C----CCCCCCCCCceEEEE--CCEEEEEccC
Q 016413 173 GVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET--RKWDS--I----PPLPSPRYSPATQLW--RGRLHVMGGS 237 (390)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~--~~W~~--~----~~~p~~r~~~~~~~~--~~~iyv~GG~ 237 (390)
+++..++++|+|=| +.+|+++... ..... + +.+|.. --++... ++++|+|-|.
T Consensus 11 Ai~~~~g~~yfFkg----------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~--IDAa~~~~~~~~~yfFkG~ 73 (195)
T 1itv_A 11 AIAEIGNQLYLFKD----------GKYWRFSEGRGSRPQGPFLIADKWPALPRK--LDSVFEEPLSKKLFFFSGR 73 (195)
T ss_dssp EEEEETTEEEEEET----------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS--CSEEEECTTTCCEEEEETT
T ss_pred EEEEeCCEEEEEEC----------CEEEEEECCccccCCCcEEhhhccCCCCCC--ccEEEEECCCCeEEEEeCC
Confidence 45568999999965 4577887655 22221 1 134432 1123333 6789999764
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=74.84 E-value=1 Score=41.26 Aligned_cols=51 Identities=8% Similarity=0.072 Sum_probs=25.2
Q ss_pred EEEeCCEEEEEeceeCCCCCCCCceEEEEECCCC--CeEeCCCCCCCCCCceEEEECCEEEEEccC
Q 016413 174 VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR--KWDSIPPLPSPRYSPATQLWRGRLHVMGGS 237 (390)
Q Consensus 174 ~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 237 (390)
.++.++.||+.+. ...+.++|.++. .|+.-. . ....+.++.++.+|+.++.
T Consensus 5 P~v~~~~v~~gs~---------dg~v~a~d~~tG~~~W~~~~---~-~~~s~p~~~~g~~~v~~s~ 57 (369)
T 2hz6_A 5 VTLPETLLFVSTL---------DGSLHAVSKRTGSIKWTLKE---D-PVLQVPTHVEEPAFLPDPN 57 (369)
T ss_dssp ---CTTEEEEEET---------TSEEEEEETTTCCEEEEEEC---C-CSCCCC-----CCEEECTT
T ss_pred CeeeCCEEEEEcC---------CCEEEEEECCCCCEEEEecC---C-CceecceEcCCCEEEEeCC
Confidence 3456777777542 245888997765 487643 1 1112334556778887643
No 222
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=74.56 E-value=72 Score=31.78 Aligned_cols=94 Identities=15% Similarity=0.083 Sum_probs=47.5
Q ss_pred ceEEEE--CCEEEEEecCCCCCCCCCeEEEEeCCC----CceeecCCCCCCCCCcceEEEE--eCCEEEEEeceeCCCCC
Q 016413 122 GAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTD----NKWVDRFDMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCR 193 (390)
Q Consensus 122 ~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~----~~W~~~~~l~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~ 193 (390)
++++.. ++.||+.--. ...|.++++.+ ..-..+ +.... ..-.++++ .++.||+.-.
T Consensus 409 ~gla~d~~~~~Ly~sD~~------~~~I~~~~~~g~~~~~~~~~~--i~~~~-~~P~glavD~~~g~LY~tD~------- 472 (699)
T 1n7d_A 409 VALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTV--ISRDI-QAPDGLAVDWIHSNIYWTDS------- 472 (699)
T ss_dssp CCCEEETTTTEEEECCTT------TTSBEEEESCCCCC-CCCCCB--CCSCC---CCCEECCCSSSBCEECCT-------
T ss_pred EEEccccccCeEEEEecC------CCeEEEEecCCCCCCcceEEE--EeCCC-CCcceEEEEeeCCcEEEEec-------
Confidence 344443 5788886221 24588898875 111111 11111 11123343 4688998631
Q ss_pred CCCceEEEEECCCCCeEeCCC--CCCCCCCceEEE--ECCEEEEEc
Q 016413 194 GPTSRTFVLDSETRKWDSIPP--LPSPRYSPATQL--WRGRLHVMG 235 (390)
Q Consensus 194 ~~~~~v~~yd~~~~~W~~~~~--~p~~r~~~~~~~--~~~~iyv~G 235 (390)
....|+++++....-+.+.. +..|+ .+++ .++.||+..
T Consensus 473 -~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td 514 (699)
T 1n7d_A 473 -VLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTD 514 (699)
T ss_dssp -TTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECC
T ss_pred -cCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcc
Confidence 14568889987765444432 22332 2333 367788764
No 223
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=74.30 E-value=13 Score=32.73 Aligned_cols=59 Identities=8% Similarity=0.075 Sum_probs=30.4
Q ss_pred CCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEe
Q 016413 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
++..++.|+.+ ..+.+||..+.+-.. .+.........+.+ ++.+++.|+.+ ..+..|++
T Consensus 76 dg~~l~s~s~D--------~~v~~wd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~D-----~~i~vwd~ 136 (319)
T 3frx_A 76 DGAYALSASWD--------KTLRLWDVATGETYQ--RFVGHKSDVMSVDIDKKASMIISGSRD-----KTIKVWTI 136 (319)
T ss_dssp TSSEEEEEETT--------SEEEEEETTTTEEEE--EEECCSSCEEEEEECTTSCEEEEEETT-----SCEEEEET
T ss_pred CCCEEEEEeCC--------CEEEEEECCCCCeeE--EEccCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEEC
Confidence 56666777643 457788887764211 11111111112222 45677777654 35677774
No 224
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=73.86 E-value=23 Score=35.24 Aligned_cols=121 Identities=16% Similarity=0.203 Sum_probs=64.7
Q ss_pred eEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCC--------CCCceeEEEECCEEEEEcCCCCC
Q 016413 223 ATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPR--------GGPHRACFVFNDRLFVVGGQEGD 294 (390)
Q Consensus 223 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~--------~~~~~~~~~~~~~iyv~GG~~~~ 294 (390)
+-++.++.||+.... ..+..+|. ......|+.-...+. .....+.++.+++||+... +
T Consensus 72 ~P~v~~g~vyv~~~~------~~v~AlD~-----~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-d-- 137 (677)
T 1kb0_A 72 TPVVVDGIMYVSASW------SVVHAIDT-----RTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-D-- 137 (677)
T ss_dssp CCEEETTEEEEECGG------GCEEEEET-----TTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-T--
T ss_pred CCEEECCEEEEECCC------CeEEEEEC-----CCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-C--
Confidence 346789999998652 23444442 134456876543221 0112245677888887643 1
Q ss_pred CCCCCCCCccccccccceecCcEEeeC-CCC--CeEECCC-CCCCCCcceeEEEEECCEEEEEcCCCCCCCcceeeEEee
Q 016413 295 FMAKPGSPIFKCSRRHEVVYGDVYMLD-DEM--KWKVLPP-MPKPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVG 370 (390)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~--~W~~~~~-~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 370 (390)
..++.+| .+. .|+.-.. -+........+.++.+++||+..+..+.. ...
T Consensus 138 --------------------g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~-------~~g 190 (677)
T 1kb0_A 138 --------------------GRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYG-------VRG 190 (677)
T ss_dssp --------------------SEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTC-------CBC
T ss_pred --------------------CEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccC-------CCC
Confidence 2389999 543 7886432 11111111223356788888765432211 122
Q ss_pred eEEEeecCcc--ceee
Q 016413 371 EVFQFHLDSL--VIIY 384 (390)
Q Consensus 371 ~v~~yd~~~~--~W~~ 384 (390)
.++.||.++. .|..
T Consensus 191 ~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 191 YITAYDAETGERKWRW 206 (677)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCcEEEEe
Confidence 5889998764 5754
No 225
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=73.85 E-value=23 Score=35.21 Aligned_cols=121 Identities=17% Similarity=0.240 Sum_probs=63.5
Q ss_pred eEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCC--------CCCceeEEEECCEEEEEcCCCCC
Q 016413 223 ATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPR--------GGPHRACFVFNDRLFVVGGQEGD 294 (390)
Q Consensus 223 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~--------~~~~~~~~~~~~~iyv~GG~~~~ 294 (390)
+-++.++.||+.... ..+..+|. ......|+.-...+. .....+.++.+++||+... ++
T Consensus 61 ~P~v~~g~vyv~~~~------~~v~AlD~-----~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-dg- 127 (668)
T 1kv9_A 61 TPLFHDGVIYTSMSW------SRVIAVDA-----ASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-DG- 127 (668)
T ss_dssp CCEEETTEEEEEEGG------GEEEEEET-----TTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-TS-
T ss_pred CCEEECCEEEEECCC------CeEEEEEC-----CCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-CC-
Confidence 345789999998642 12333332 234445776433221 1111245667888887542 21
Q ss_pred CCCCCCCCccccccccceecCcEEeeC-CCC--CeEECCCCCCCCCcceeEEEEECCEEEEEcCCCCCCCcceeeEEeee
Q 016413 295 FMAKPGSPIFKCSRRHEVVYGDVYMLD-DEM--KWKVLPPMPKPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGE 371 (390)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~--~W~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 371 (390)
.++.+| .+. .|+.-..-+........+.++.+++||+..+..... ....
T Consensus 128 ---------------------~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~-------~~g~ 179 (668)
T 1kv9_A 128 ---------------------RLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYG-------VRGF 179 (668)
T ss_dssp ---------------------EEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTC-------CBCE
T ss_pred ---------------------EEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcC-------CCCE
Confidence 389999 543 788643222111222223356788888754322111 1125
Q ss_pred EEEeecCcc--ceee
Q 016413 372 VFQFHLDSL--VIIY 384 (390)
Q Consensus 372 v~~yd~~~~--~W~~ 384 (390)
++.||+++. .|..
T Consensus 180 v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 180 VSAYDADTGKLAWRF 194 (668)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCcEEEEe
Confidence 889998764 5754
No 226
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=73.33 E-value=78 Score=31.62 Aligned_cols=141 Identities=10% Similarity=0.013 Sum_probs=69.6
Q ss_pred ccEEEEecCCCCCCCccccceeeeeccCCCceEeecCCCCCccccccceEEEec-CCCchhHHHhhhcccccccCCCCeE
Q 016413 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVID-KKGQDAERFLSATFADLPAPDLEWE 110 (390)
Q Consensus 32 ~~~l~~~GG~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~W~ 110 (390)
++.||+.||... -+.+||+.++++..+...... ......++.. ..+.---.. ..-+.+|++.+.+++
T Consensus 482 ~g~lWi~~~t~~--------Gl~~~d~~~~~~~~~~~~~~~---~~~~~~~i~~d~~g~lWigt-~~Gl~~~~~~~~~~~ 549 (758)
T 3ott_A 482 EGNVWVLLYNNK--------GIDKINPRTREVTKLFADELT---GEKSPNYLLCDEDGLLWVGF-HGGVMRINPKDESQQ 549 (758)
T ss_dssp TSCEEEEETTCS--------SEEEEETTTTEEEEECTTTSC---GGGCEEEEEECTTSCEEEEE-TTEEEEECC--CCCC
T ss_pred CCCEEEEccCCC--------CcEEEeCCCCceEEecCCCcC---CCcccceEEECCCCCEEEEe-cCceEEEecCCCceE
Confidence 456777655522 477899999888877432111 1111112222 222111111 125778888877766
Q ss_pred ECC--CCCCcCCCceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEece
Q 016413 111 QMP--SAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQ 187 (390)
Q Consensus 111 ~~~--~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~ 187 (390)
... .++. ..-.+++.-++.|++... +-+.+|||.+.+..... ++. .....++.. .++.|| |||.
T Consensus 550 ~~~~~gl~~-~~i~~i~~~~g~lWi~t~--------~Gl~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~G~l~-fG~~ 616 (758)
T 3ott_A 550 SISFGSFSN-NEILSMTCVKNSIWVSTT--------NGLWIIDRKTMDARQQN-MTN--KRFTSLLFDPKEDCVY-LGGA 616 (758)
T ss_dssp BCCCCC----CCEEEEEEETTEEEEEES--------SCEEEEETTTCCEEEC---CC--CCCSEEEEETTTTEEE-EECB
T ss_pred EecccCCCc-cceEEEEECCCCEEEECC--------CCeEEEcCCCceeEEec-CCC--CceeeeEEECCCCcEE-EecC
Confidence 543 2332 112333344778888652 23889999998876542 332 122222222 266665 4553
Q ss_pred eCCCCCCCCceEEEEECCC
Q 016413 188 YGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 188 ~~~~~~~~~~~v~~yd~~~ 206 (390)
+-+.+|+|+.
T Consensus 617 ---------~Gl~~f~p~~ 626 (758)
T 3ott_A 617 ---------DGFGISHSNL 626 (758)
T ss_dssp ---------SEEEEEEC--
T ss_pred ---------CceEEEChhh
Confidence 4467789874
No 227
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=72.96 E-value=6 Score=34.81 Aligned_cols=61 Identities=11% Similarity=0.035 Sum_probs=32.6
Q ss_pred eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEE-C-CEEEEEccCCCCCCCCCcceEE
Q 016413 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-R-GRLHVMGGSKENRHTPGLEHWS 250 (390)
Q Consensus 177 ~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~ 250 (390)
.++++|+.++. ...+.++|+.+.+....-+.+.....+.++.. + +.+|+.+... ..+..|+
T Consensus 9 ~~~~~~v~~~~--------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~-----~~i~~~d 71 (349)
T 1jmx_B 9 AGHEYMIVTNY--------PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY-----GDIYGID 71 (349)
T ss_dssp TTCEEEEEEET--------TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT-----TEEEEEE
T ss_pred CCCEEEEEeCC--------CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC-----CcEEEEe
Confidence 46778887753 35688999988765432222221122233333 3 3577776322 3455555
No 228
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=72.20 E-value=60 Score=29.77 Aligned_cols=82 Identities=12% Similarity=0.013 Sum_probs=42.8
Q ss_pred eEEEEeCCCCc-eeecCCCCCCCCCcceEEEEe--CCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCC---CCCCCC
Q 016413 146 HVDVYNFTDNK-WVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP---PLPSPR 219 (390)
Q Consensus 146 ~v~~yd~~~~~-W~~~~~l~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r 219 (390)
.++++|+.++. ...+..+..+....-+++++. ++.||+.-. ...+++||+.+..-..+. ......
T Consensus 195 ~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~---------~~~I~~~d~~~~~~~~~~~~~~~g~~~ 265 (409)
T 3hrp_A 195 TVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS---------NKNFGRFNVKTQEVTLIKQLELSGSLG 265 (409)
T ss_dssp EEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT---------TCEEEEEETTTCCEEEEEECCCCSCCC
T ss_pred eEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC---------CCcEEEEECCCCCEEEEecccccCCCC
Confidence 68999987543 223311111001122233443 689999421 347999999887755541 111112
Q ss_pred CC-c-eEEEE--CCEEEEEcc
Q 016413 220 YS-P-ATQLW--RGRLHVMGG 236 (390)
Q Consensus 220 ~~-~-~~~~~--~~~iyv~GG 236 (390)
.. . .++.. ++.||+...
T Consensus 266 ~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 266 TNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp CSSCCEEEEETTTTEEEEEET
T ss_pred CCccccEEEeCCCCEEEEEeC
Confidence 22 1 44444 589999853
No 229
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=72.12 E-value=24 Score=29.63 Aligned_cols=19 Identities=5% Similarity=0.141 Sum_probs=15.2
Q ss_pred ECCEEEEEcCCCCCCCcceeeEEeeeEEEeecC
Q 016413 346 VNNSIIITGGTTEKHPMTKRMILVGEVFQFHLD 378 (390)
Q Consensus 346 ~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~ 378 (390)
.++++|+|-|. ..|+||..
T Consensus 179 ~~g~~YfFkG~--------------~ywr~d~~ 197 (225)
T 3oyo_A 179 KEPEAYLFKGQ--------------NYVRIDFT 197 (225)
T ss_dssp STTEEEEEETT--------------EEEEEECC
T ss_pred CCCEEEEEECC--------------EEEEEeCC
Confidence 37899999774 47888887
No 230
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=71.68 E-value=13 Score=34.41 Aligned_cols=101 Identities=6% Similarity=0.097 Sum_probs=48.6
Q ss_pred EEEEecCCCCCCCCCeEEEEeCCCC---ceee--cCCCCCCCCCcceEEEEe--CCEEEEEeceeCCCCCCCCceEEEEE
Q 016413 131 FYVFAGYGSLDYVHSHVDVYNFTDN---KWVD--RFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLD 203 (390)
Q Consensus 131 lyv~GG~~~~~~~~~~v~~yd~~~~---~W~~--~~~l~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd 203 (390)
+++.|+.++ .+.+||+.+. .+.. ...+... ...-.+++.. ++.+++.|+. ...+.+||
T Consensus 196 ~l~s~~~dg------~i~vwd~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~l~s~~~--------dg~i~i~d 260 (430)
T 2xyi_A 196 YLLSASDDH------TICLWDINATPKEHRVIDAKNIFTGH-TAVVEDVAWHLLHESLFGSVAD--------DQKLMIWD 260 (430)
T ss_dssp EEEEECTTS------CEEEEETTSCCBGGGEEECSEEECCC-SSCEEEEEECSSCTTEEEEEET--------TSEEEEEE
T ss_pred eEEEEeCCC------eEEEEeCCCCCCCCceeccceeecCC-CCCEeeeEEeCCCCCEEEEEeC--------CCeEEEEE
Confidence 777787664 4788888762 2211 1111110 1122233332 5667777753 35588899
Q ss_pred CCCCC-eEeCCCCCCCCCCceEEEE---CCEEEEEccCCCCCCCCCcceEEe
Q 016413 204 SETRK-WDSIPPLPSPRYSPATQLW---RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 204 ~~~~~-W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
..+.. ...+..+.........+.+ +..+++.|+.+ ..+..|++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d-----g~v~vwd~ 307 (430)
T 2xyi_A 261 TRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD-----KTVALWDL 307 (430)
T ss_dssp TTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEET
T ss_pred CCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC-----CeEEEEeC
Confidence 87642 1111111111111222222 23478887764 34667764
No 231
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=71.28 E-value=22 Score=34.61 Aligned_cols=59 Identities=14% Similarity=0.181 Sum_probs=35.2
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE--eCCEEEEEeceeCCCCCCCCceEEEEECC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (390)
++.+||....+ +.+.++|+.+.+-.. .++.. ..-|.+++ .+.++|+.+. ...+.+||+.
T Consensus 166 ~~~~~V~~~~~------~~V~viD~~t~~v~~--~i~~g--~~p~~v~~SpDGr~lyv~~~---------dg~V~viD~~ 226 (567)
T 1qks_A 166 ENLFSVTLRDA------GQIALIDGSTYEIKT--VLDTG--YAVHISRLSASGRYLFVIGR---------DGKVNMIDLW 226 (567)
T ss_dssp GGEEEEEETTT------TEEEEEETTTCCEEE--EEECS--SCEEEEEECTTSCEEEEEET---------TSEEEEEETT
T ss_pred CceEEEEeCCC------CeEEEEECCCCeEEE--EEeCC--CCccceEECCCCCEEEEEcC---------CCeEEEEECC
Confidence 45778775432 469999998876432 22221 22234444 3557887642 3469999985
No 232
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=71.21 E-value=77 Score=30.64 Aligned_cols=23 Identities=9% Similarity=0.239 Sum_probs=16.1
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCc
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK 156 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~ 156 (390)
++++++.|+.++ .+.++|..+.+
T Consensus 70 dg~~lasg~~d~------~v~lWd~~~~~ 92 (611)
T 1nr0_A 70 SGYYCASGDVHG------NVRIWDTTQTT 92 (611)
T ss_dssp TSSEEEEEETTS------EEEEEESSSTT
T ss_pred CCcEEEEEeCCC------CEEEeECCCCc
Confidence 567888888763 47888876544
No 233
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=71.03 E-value=79 Score=30.69 Aligned_cols=75 Identities=21% Similarity=0.402 Sum_probs=46.7
Q ss_pred ceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCc--eeecCCCCCCC-CC---cceEEEEeCCEEEEEeceeCCCCCCC
Q 016413 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDM-AH---SHLGVVSDGRYIYIVSGQYGPQCRGP 195 (390)
Q Consensus 122 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~l~~~~-~r---~~~~~~~~~~~iyv~GG~~~~~~~~~ 195 (390)
.+.++.+++||+....+ .+..+|..+.+ |+.-...+... .. ...+.++.+++||+...
T Consensus 62 ~~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~--------- 125 (582)
T 1flg_A 62 SQAIVSDGVIYVTASYS-------RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL--------- 125 (582)
T ss_dssp CCCEEETTEEEEEETTT-------EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET---------
T ss_pred eccEEECCEEEEEcCCC-------CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC---------
Confidence 34467899999986532 38889987654 87643322210 00 11234568899988532
Q ss_pred CceEEEEECCCCC--eEeC
Q 016413 196 TSRTFVLDSETRK--WDSI 212 (390)
Q Consensus 196 ~~~v~~yd~~~~~--W~~~ 212 (390)
...+..+|.++.+ |+.-
T Consensus 126 dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 126 DASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TTEEEEEESSSCCEEEEEE
T ss_pred CCEEEEEECCCCCEEeeec
Confidence 3568899987764 8754
No 234
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=69.99 E-value=71 Score=30.51 Aligned_cols=199 Identities=10% Similarity=0.036 Sum_probs=91.6
Q ss_pred EEECCEEEEEecC-CCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEE
Q 016413 125 IQIKNLFYVFAGY-GSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLD 203 (390)
Q Consensus 125 ~~~~~~lyv~GG~-~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd 203 (390)
...+++.+++++. ++ .+.+|++.+..=.++...+. ....+.+...+++......++. .....++..+
T Consensus 29 ~~~DG~~la~~s~~~g------~~~lw~~~~g~~~~lt~~~~---~~~~~~~~spd~~l~~~~~~~g---~~~~~l~~~~ 96 (582)
T 3o4h_A 29 GVVDGDKLLVVGFSEG------SVNAYLYDGGETVKLNREPI---NSVLDPHYGVGRVILVRDVSKG---AEQHALFKVN 96 (582)
T ss_dssp EEETTTEEEEEEEETT------EEEEEEEETTEEEECCSSCC---SEECEECTTCSEEEEEEECSTT---SCCEEEEEEE
T ss_pred cCCCCCeEEEEEccCC------ceeEEEEcCCCcEeeecccc---cccccccCCCCeEEEEeccCCC---CcceEEEEEe
Confidence 4557776676654 32 24444445555444443221 1112222223355444432111 1145677787
Q ss_pred C--CCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeEEEE
Q 016413 204 S--ETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF 281 (390)
Q Consensus 204 ~--~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~ 281 (390)
. .... ..+...+..+ ..+...-++.++++.+... ....|++ .+.+-+.+...+. . ..+..-
T Consensus 97 ~~~~g~~-~~l~~~~~~~-~~~~s~dg~~~~~~s~~~~-----~~~l~d~-------~~g~~~~l~~~~~--~-~~~~sp 159 (582)
T 3o4h_A 97 TSRPGEE-QRLEAVKPMR-ILSGVDTGEAVVFTGATED-----RVALYAL-------DGGGLRELARLPG--F-GFVSDI 159 (582)
T ss_dssp TTSTTCC-EECTTSCSBE-EEEEEECSSCEEEEEECSS-----CEEEEEE-------ETTEEEEEEEESS--C-EEEEEE
T ss_pred ccCCCcc-ccccCCCCce-eeeeCCCCCeEEEEecCCC-----CceEEEc-------cCCcEEEeecCCC--c-eEEECC
Confidence 7 4332 2333322212 1222233445555544332 2336664 4555555443332 2 223344
Q ss_pred CCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCCCCCCcceeEEEEECCEEEEEcCCCCCC
Q 016413 282 NDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHIECAWVIVNNSIIITGGTTEKH 360 (390)
Q Consensus 282 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~ 360 (390)
+++.+++++.+... ..+++.+| .+.+++.+..-+.. ...-+..-+|+.++.+..++.
T Consensus 160 DG~~la~~~~~~~~------------------~~~i~~~d~~~g~~~~l~~~~~~---~~~~~~SpDG~~l~~~~~~~~- 217 (582)
T 3o4h_A 160 RGDLIAGLGFFGGG------------------RVSLFTSNLSSGGLRVFDSGEGS---FSSASISPGMKVTAGLETARE- 217 (582)
T ss_dssp ETTEEEEEEEEETT------------------EEEEEEEETTTCCCEEECCSSCE---EEEEEECTTSCEEEEEECSSC-
T ss_pred CCCEEEEEEEcCCC------------------CeEEEEEcCCCCCceEeecCCCc---cccceECCCCCEEEEccCCCe-
Confidence 66666655543211 12499999 67777766433211 111112336665554333221
Q ss_pred CcceeeEEeeeEEEeecCcccee
Q 016413 361 PMTKRMILVGEVFQFHLDSLVII 383 (390)
Q Consensus 361 ~~~~~~~~~~~v~~yd~~~~~W~ 383 (390)
..++++|+++.+..
T Consensus 218 ---------~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 218 ---------ARLVTVDPRDGSVE 231 (582)
T ss_dssp ---------EEEEEECTTTCCEE
T ss_pred ---------eEEEEEcCCCCcEE
Confidence 25899999887765
No 235
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=69.70 E-value=70 Score=29.57 Aligned_cols=183 Identities=13% Similarity=0.095 Sum_probs=97.1
Q ss_pred CCeE--ECCCCCCcCCCceEEEECCEEEEEecCCCCCCCCC-eEEEEe----CCCCce-eecCCCCCCCCCcceEEEEeC
Q 016413 107 LEWE--QMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHS-HVDVYN----FTDNKW-VDRFDMPKDMAHSHLGVVSDG 178 (390)
Q Consensus 107 ~~W~--~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~-~v~~yd----~~~~~W-~~~~~l~~~~~r~~~~~~~~~ 178 (390)
+.|. .|+..|..-.-|+.+.+++.-|++|=..++-.+.. -+..|. .-.+.= +.++.--.+ .-.-.++-..+
T Consensus 270 spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~-~AsEPCvkyYd 348 (670)
T 3ju4_A 270 SPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEP-DASEPCIKYYD 348 (670)
T ss_dssp SCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCT-TEEEEEEEEET
T ss_pred CCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhcc-ccccchhhhhC
Confidence 3453 34555544456899999998888875443332211 122221 111111 222221111 23455666789
Q ss_pred CEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCC-CCCCCCCCceEEEECCEEEEEccCCCC----------CCC---C
Q 016413 179 RYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP-PLPSPRYSPATQLWRGRLHVMGGSKEN----------RHT---P 244 (390)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~----------~~~---~ 244 (390)
+.||+.---... .+.-+.+.+-+.....|+.+. |-.......-.+.+++.||+||-.... ++. +
T Consensus 349 gvLyLtTRgt~~--~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsERA~nEWE~G~pD~RY~a~yP 426 (670)
T 3ju4_A 349 GVLYLITRGTRG--DRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSERAENEWEAGAPDDRYKASYP 426 (670)
T ss_dssp TEEEEEEEESCT--TSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEECSSTTCSSTTCCCCCSSCBCC
T ss_pred CEEEEEecCcCC--CCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEeccccccccccCCCcccccccCC
Confidence 999998632221 134578888888888998875 222333344467899999999974321 111 1
Q ss_pred CcceEEeeeeccccccCCeEEccC------CCCCCCce-eEEEECCEEE-EEcCCC
Q 016413 245 GLEHWSIAVKDGKALEKAWRTEIP------IPRGGPHR-ACFVFNDRLF-VVGGQE 292 (390)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~W~~~~~------~p~~~~~~-~~~~~~~~iy-v~GG~~ 292 (390)
....-.+.+.+...+.-+|..+.. ......+- ++|+.++-|| +|||.+
T Consensus 427 RtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd 482 (670)
T 3ju4_A 427 RTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGED 482 (670)
T ss_dssp EEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBC
T ss_pred ceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcc
Confidence 111112222333345667776532 12222222 4566677765 789975
No 236
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=69.66 E-value=18 Score=31.58 Aligned_cols=118 Identities=12% Similarity=0.101 Sum_probs=52.9
Q ss_pred CCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeEEEE-CCEEEEEcCCCCCCCCCCCCCcccc
Q 016413 228 RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF-NDRLFVVGGQEGDFMAKPGSPIFKC 306 (390)
Q Consensus 228 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~ 306 (390)
+++||+.+... ..+.+|+ +.+.+...+...+.. .-.+++.. ++++|+........
T Consensus 55 ~g~l~~~~~~~-----~~i~~~d-------~~~~~~~~~~~~~~~-~~~~i~~~~dg~l~v~~~~~~~~----------- 110 (333)
T 2dg1_A 55 QGQLFLLDVFE-----GNIFKIN-------PETKEIKRPFVSHKA-NPAAIKIHKDGRLFVCYLGDFKS----------- 110 (333)
T ss_dssp TSCEEEEETTT-----CEEEEEC-------TTTCCEEEEEECSSS-SEEEEEECTTSCEEEEECTTSSS-----------
T ss_pred CCCEEEEECCC-----CEEEEEe-------CCCCcEEEEeeCCCC-CcceEEECCCCcEEEEeCCCCCC-----------
Confidence 56777776432 2344444 456666554321111 11233332 67788875432100
Q ss_pred ccccceecCcEEeeC-CCCCeE-ECCCCCCCCCcceeEEEEECCEEEEEcCCCCCCCcceeeEEeeeEEEeecCcccee
Q 016413 307 SRRHEVVYGDVYMLD-DEMKWK-VLPPMPKPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLVII 383 (390)
Q Consensus 307 ~~~~~~~~~~v~~yd-~~~~W~-~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 383 (390)
...+++|| .+.+.+ .+..... .......++.-++++|+......... ....+++||+++.+..
T Consensus 111 -------~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~i~~d~~g~l~v~~~~~~~~~------~~~~l~~~~~~~~~~~ 175 (333)
T 2dg1_A 111 -------TGGIFAATENGDNLQDIIEDLST-AYCIDDMVFDSKGGFYFTDFRGYSTN------PLGGVYYVSPDFRTVT 175 (333)
T ss_dssp -------CCEEEEECTTSCSCEEEECSSSS-CCCEEEEEECTTSCEEEEECCCBTTB------CCEEEEEECTTSCCEE
T ss_pred -------CceEEEEeCCCCEEEEEEccCcc-CCcccceEECCCCCEEEEeccccccC------CCceEEEEeCCCCEEE
Confidence 12489998 555443 2222211 11111112223677877543211100 1125777777655443
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=68.84 E-value=56 Score=28.13 Aligned_cols=71 Identities=17% Similarity=0.184 Sum_probs=36.0
Q ss_pred EEEEeCCCC-ceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECC-CCCeEeCCCCCCCCCCceE
Q 016413 147 VDVYNFTDN-KWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSE-TRKWDSIPPLPSPRYSPAT 224 (390)
Q Consensus 147 v~~yd~~~~-~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~-~~~W~~~~~~p~~r~~~~~ 224 (390)
+.+||+..+ .|... .+.. .....+..++.||+... ...+++||+. +..|+...+.+. ..+.
T Consensus 80 l~~~d~~g~~~~~~~--~~~~---~~~~~~~~~~~l~v~t~---------~~~l~~~d~~g~~~~~~~~~~~~---~~~~ 142 (330)
T 3hxj_A 80 VYAINPDGTEKWRFD--TKKA---IVSDFTIFEDILYVTSM---------DGHLYAINTDGTEKWRFKTKKAI---YATP 142 (330)
T ss_dssp EEEECCCGGGGGGSC--C--------CCEEEETTEEEEECT---------TSEEEEECTTSCEEEEEECSSCC---CSCC
T ss_pred EEEECCCCcEEEEEE--CCCC---cccCceEECCEEEEEec---------CCEEEEEcCCCCEEEEEcCCCce---eeee
Confidence 888997433 35432 1211 11122334888887531 2458889887 345765432221 1223
Q ss_pred EEE-CCEEEEE
Q 016413 225 QLW-RGRLHVM 234 (390)
Q Consensus 225 ~~~-~~~iyv~ 234 (390)
+.. ++.||+.
T Consensus 143 ~~~~~g~l~vg 153 (330)
T 3hxj_A 143 IVSEDGTIYVG 153 (330)
T ss_dssp EECTTSCEEEE
T ss_pred EEcCCCEEEEE
Confidence 344 6677774
No 238
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=66.98 E-value=77 Score=29.00 Aligned_cols=91 Identities=19% Similarity=0.128 Sum_probs=48.8
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (390)
++.||+....+ ..+.++|+.+++-..+..... ....+....++.||+.... + ...++++|+.+.
T Consensus 141 ~g~lyv~d~~~------~~I~~id~~~g~~~~~~~~~~---~~~ia~~~~g~~l~~~d~~-~------~~~I~~~d~~~~ 204 (409)
T 3hrp_A 141 NNTVLAYQRDD------PRVRLISVDDNKVTTVHPGFK---GGKPAVTKDKQRVYSIGWE-G------THTVYVYMKASG 204 (409)
T ss_dssp TTEEEEEETTT------TEEEEEETTTTEEEEEEETCC---BCBCEECTTSSEEEEEBSS-T------TCEEEEEEGGGT
T ss_pred CCCEEEEecCC------CcEEEEECCCCEEEEeeccCC---CCceeEecCCCcEEEEecC-C------CceEEEEEcCCC
Confidence 57899986532 469999999877655433221 1122222235567776431 1 127899998754
Q ss_pred C-eEeCCCC-C-CCCCCceEEEE--CCEEEEE
Q 016413 208 K-WDSIPPL-P-SPRYSPATQLW--RGRLHVM 234 (390)
Q Consensus 208 ~-W~~~~~~-p-~~r~~~~~~~~--~~~iyv~ 234 (390)
. ...+... + ....-+.+++. ++.||+.
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~ 236 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDETEEWLYFV 236 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTTSSEEEEE
T ss_pred ceeEEeeeccchhcCCcEEEEEeCCCCeEEEE
Confidence 3 2333111 1 11222334433 6789995
No 239
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=66.42 E-value=30 Score=31.56 Aligned_cols=25 Identities=16% Similarity=0.208 Sum_probs=17.8
Q ss_pred EEE-CCEEEEEcCCCCCCCcceeeEEeeeEEEeecCccce
Q 016413 344 VIV-NNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLVI 382 (390)
Q Consensus 344 ~~~-~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W 382 (390)
+.. ++++|+|=|. ..|+||..+.+-
T Consensus 328 ~~~~~g~~YfFkg~--------------~ywr~d~~~~~v 353 (365)
T 3ba0_A 328 FYSKNKYYYFFQGS--------------NQFEYDFLLQRI 353 (365)
T ss_dssp EEETTTEEEEEETT--------------EEEEEETTTTEE
T ss_pred eEecCCcEEEEeCC--------------EEEEEECCccEE
Confidence 444 8899999773 478888776543
No 240
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=66.11 E-value=77 Score=28.68 Aligned_cols=67 Identities=7% Similarity=0.016 Sum_probs=37.8
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
++.+++.|+.++ .+.+||+.+.+-...-..+.. ...-.+++. -++.+++.|+.+ ..+.+||..+
T Consensus 181 ~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~~~d--------g~i~iwd~~~ 245 (437)
T 3gre_A 181 EKSLLVALTNLS------RVIIFDIRTLERLQIIENSPR-HGAVSSICIDEECCVLILGTTR--------GIIDIWDIRF 245 (437)
T ss_dssp SCEEEEEEETTS------EEEEEETTTCCEEEEEECCGG-GCCEEEEEECTTSCEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEeCCC------eEEEEeCCCCeeeEEEccCCC-CCceEEEEECCCCCEEEEEcCC--------CeEEEEEcCC
Confidence 467888887763 588999987654322111100 111222232 256777777643 3478899887
Q ss_pred CCe
Q 016413 207 RKW 209 (390)
Q Consensus 207 ~~W 209 (390)
.+.
T Consensus 246 ~~~ 248 (437)
T 3gre_A 246 NVL 248 (437)
T ss_dssp TEE
T ss_pred ccE
Confidence 543
No 241
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=64.52 E-value=1.2e+02 Score=30.29 Aligned_cols=132 Identities=17% Similarity=0.129 Sum_probs=66.6
Q ss_pred ECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCC--CCCCCCCcceEEEE--eCCEEEEEeceeCCCCCCCCceEEEE
Q 016413 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD--MPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVL 202 (390)
Q Consensus 127 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~--l~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~y 202 (390)
.++.||+.-. ....|+++++....-..+.. +..| + ++++ .++.||+.-- .....++++
T Consensus 463 ~~g~LY~tD~------~~~~I~v~d~dg~~~~~l~~~~~~~P--~---giavDp~~g~ly~td~-------~~~~~I~~~ 524 (699)
T 1n7d_A 463 IHSNIYWTDS------VLGTVSVADTKGVKRKTLFREQGSKP--R---AIVVDPVHGFMYWTDW-------GTPAKIKKG 524 (699)
T ss_dssp SSSBCEECCT------TTSCEEEEBSSSCCEEEECCCSSCCC--C---CEECCSSSSCCEECCC-------SSSCCEEBC
T ss_pred eCCcEEEEec------cCCeEEEEecCCCceEEEEeCCCCCc--c---eEEEccCCCcEEEccc-------CCCCeEEEE
Confidence 3678888521 12458999988765444322 2222 2 3343 3678888641 112567787
Q ss_pred ECCCCCeEeCC--CCCCCCCCceEEE--ECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCC-CCCCCcee
Q 016413 203 DSETRKWDSIP--PLPSPRYSPATQL--WRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPI-PRGGPHRA 277 (390)
Q Consensus 203 d~~~~~W~~~~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~-p~~~~~~~ 277 (390)
++....-+.+. .+..| .++++ .+++||+.-.. ...+.++++ ....-+.+... .......+
T Consensus 525 ~~dG~~~~~l~~~~l~~P---nGlavd~~~~~LY~aD~~-----~~~I~~~d~-------dG~~~~~~~~~~~~~~~P~g 589 (699)
T 1n7d_A 525 GLNGVDIYSLVTENIQWP---NGITLDLLSGRLYWVDSK-----LHSISSIDV-------NGGNRKTILEDEKRLAHPFS 589 (699)
T ss_dssp CSSSCCCCEESCSSCSSC---CCEEECTTTCCEEEEETT-----TTEEEEECS-------SSSCCEEECCCSSSCSSCCC
T ss_pred eCCCCCeeEEEeCCCCCc---cEEEEeccCCEEEEEecC-----CCeEEEEcc-------CCCceEEEEecCCcCCCceE
Confidence 77544333222 22222 22333 25789998532 233444442 22222222221 11122346
Q ss_pred EEEECCEEEEEcCC
Q 016413 278 CFVFNDRLFVVGGQ 291 (390)
Q Consensus 278 ~~~~~~~iyv~GG~ 291 (390)
+++.++.||+.-..
T Consensus 590 lavd~~~lywtd~~ 603 (699)
T 1n7d_A 590 LAVFEDKVFWTDII 603 (699)
T ss_dssp CEEETTEEEEECST
T ss_pred eEEECCEEEEEeCC
Confidence 77788999998743
No 242
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=64.33 E-value=73 Score=33.31 Aligned_cols=57 Identities=14% Similarity=0.096 Sum_probs=34.4
Q ss_pred CeEE-EEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCC
Q 016413 145 SHVD-VYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP 213 (390)
Q Consensus 145 ~~v~-~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 213 (390)
..++ .+|..+.+-..+. .. ......++. -+++.++++.. ...++++|+.+.+-..+.
T Consensus 358 ~~l~~~~d~~~~~~~~l~--~~--~~~~~~~~~SpDG~~la~~~~--------~~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFE--EN--LGNVFAMGVDRNGKFAVVAND--------RFEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp EEEEEEEETTTCCEEECC--CC--CCSEEEEEECTTSSEEEEEET--------TSEEEEEETTTCCEEEEE
T ss_pred CceEEEEECCCCCceEec--CC--ccceeeeEECCCCCEEEEECC--------CCeEEEEECCCCceEEec
Confidence 3688 8999888766654 21 112223333 35665566542 247899999887766554
No 243
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=64.02 E-value=31 Score=33.77 Aligned_cols=125 Identities=15% Similarity=0.135 Sum_probs=62.7
Q ss_pred ceEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCC-----C---CCceeEEE--ECCE----EEE
Q 016413 222 PATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPR-----G---GPHRACFV--FNDR----LFV 287 (390)
Q Consensus 222 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~-----~---~~~~~~~~--~~~~----iyv 287 (390)
.+-++.++.||+....+ ..+.++|.. +.....|+.-...+. . ....+.++ .+++ ||+
T Consensus 56 ~tP~v~~g~vyv~~~~~-----~~v~AlD~~----~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v 126 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFP-----NNTFALGLD----DPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILK 126 (599)
T ss_dssp SCCEEETTEEEEECSTT-----TCEEEEETT----CTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEE
T ss_pred eccEEECCEEEEEeCCC-----CEEEEEeCC----CCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEE
Confidence 34467799999986521 234444420 134456877543221 0 11123455 5777 777
Q ss_pred EcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCC--CeEECCCCCCCCCcceeEEEEECCEEEEEcCCCCCCCcce
Q 016413 288 VGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEM--KWKVLPPMPKPNSHIECAWVIVNNSIIITGGTTEKHPMTK 364 (390)
Q Consensus 288 ~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~--~W~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~ 364 (390)
... ++ .++.+| .+. .|+.-..-+........+-++.+++||+..+..+..
T Consensus 127 ~t~-dg----------------------~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g---- 179 (599)
T 1w6s_A 127 TQL-DG----------------------NVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELG---- 179 (599)
T ss_dssp ECT-TS----------------------EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGT----
T ss_pred EcC-CC----------------------EEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccC----
Confidence 532 21 389999 543 788532111111111122356788887754321110
Q ss_pred eeEEeeeEEEeecCcc--ceeec
Q 016413 365 RMILVGEVFQFHLDSL--VIIYH 385 (390)
Q Consensus 365 ~~~~~~~v~~yd~~~~--~W~~v 385 (390)
....++.||.++. .|+.-
T Consensus 180 ---~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 180 ---VRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp ---CCCEEEEEETTTCCEEEEEE
T ss_pred ---CCCeEEEEECCCCcEEEEEc
Confidence 1125889998764 57643
No 244
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=63.66 E-value=99 Score=29.08 Aligned_cols=48 Identities=21% Similarity=0.371 Sum_probs=32.2
Q ss_pred CCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeC--CCCCCCCCCceEEEECCEEEEEccCC
Q 016413 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSI--PPLPSPRYSPATQLWRGRLHVMGGSK 238 (390)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~p~~r~~~~~~~~~~~iyv~GG~~ 238 (390)
++++|+|-| +..|+||..+.+...- +.+| . --++...++++|+|-|..
T Consensus 158 ~~~~yfFkG----------~~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG~~ 207 (460)
T 1qhu_A 158 DEGILFFQG----------NRKWFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQGNQ 207 (460)
T ss_dssp SSEEEEEET----------TEEEEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEETTE
T ss_pred CCeEEEEec----------ccEEEEecccceeecccCCCCC--c-cchheeeCCceEEEECCE
Confidence 678898876 4579999887654321 1222 2 345666789999998853
No 245
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=62.17 E-value=48 Score=27.05 Aligned_cols=92 Identities=16% Similarity=0.153 Sum_probs=49.0
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCce-eecCC--CCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEEC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKW-VDRFD--MPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W-~~~~~--l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (390)
++++|+|-| +..|+|+..+-.- ..+.. +|.....-..++...++++|+|-| +..++||.
T Consensus 64 ~~~~yfFkG--------~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg----------~~ywr~d~ 125 (195)
T 1itv_A 64 SKKLFFFSG--------RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG----------RRLWRFDV 125 (195)
T ss_dssp TCCEEEEET--------TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET----------TEEEEEET
T ss_pred CCeEEEEeC--------CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC----------CEEEEEeC
Confidence 578888876 3467776432110 11222 222111333333334789999965 45789998
Q ss_pred CCCCeE-----eCC-C-CCCCCCCceEEEECCEEEEEccC
Q 016413 205 ETRKWD-----SIP-P-LPSPRYSPATQLWRGRLHVMGGS 237 (390)
Q Consensus 205 ~~~~W~-----~~~-~-~p~~r~~~~~~~~~~~iyv~GG~ 237 (390)
.+++=. .+. . ...|..-.++...++.+|.|-|.
T Consensus 126 ~~~~~~~gyPr~i~~~w~Gvp~~idaa~~~~g~~Yffkg~ 165 (195)
T 1itv_A 126 KAQMVDPRSASEVDRMFPGVPLDTHDVFQFREKAYFCQDR 165 (195)
T ss_dssp TTTEECGGGCEEHHHHSTTSCSSCSEEEEETTEEEEEETT
T ss_pred CcccccCCCccChhhcCCCCCCCCCEEEEeCCeEEEEeCC
Confidence 764311 111 0 01122334566678999999764
No 246
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=61.64 E-value=76 Score=27.11 Aligned_cols=66 Identities=9% Similarity=0.017 Sum_probs=36.2
Q ss_pred EEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eC-CEEEEEeceeCCCCCCCCceEEEEECCCC
Q 016413 130 LFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DG-RYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (390)
Q Consensus 130 ~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (390)
.+++.++.+ ..+..+|+.+.+-...-.++....+ -..++. -+ ..+|+.+.. ...+.++|+.+.
T Consensus 2 ~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~v~~~~--------~~~v~~~d~~~~ 66 (337)
T 1pby_B 2 DYILAPARP------DKLVVIDTEKMAVDKVITIADAGPT-PMVPMVAPGGRIAYATVNK--------SESLVKIDLVTG 66 (337)
T ss_dssp EEEEEEETT------TEEEEEETTTTEEEEEEECTTCTTC-CCCEEECTTSSEEEEEETT--------TTEEEEEETTTC
T ss_pred cEEEEcCCC------CeEEEEECCCCcEEEEEEcCCCCCC-ccceEEcCCCCEEEEEeCC--------CCeEEEEECCCC
Confidence 355555544 3589999988765432222220001 122333 23 478887642 356899999876
Q ss_pred CeE
Q 016413 208 KWD 210 (390)
Q Consensus 208 ~W~ 210 (390)
+-.
T Consensus 67 ~~~ 69 (337)
T 1pby_B 67 ETL 69 (337)
T ss_dssp CEE
T ss_pred CeE
Confidence 643
No 247
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=61.22 E-value=12 Score=31.53 Aligned_cols=52 Identities=25% Similarity=0.530 Sum_probs=26.9
Q ss_pred ECCEEEEEccCCCCCCC---CCcceEEeeeeccccccCCeEEccCCCCCCCceeEEEECCEEEEEcCC
Q 016413 227 WRGRLHVMGGSKENRHT---PGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQ 291 (390)
Q Consensus 227 ~~~~iyv~GG~~~~~~~---~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~ 291 (390)
.++++|+|=|..--... ....-. +.+..|..+ |...- ++...++++|+|-|.
T Consensus 27 ~~g~~yfFkg~~~Wr~~~~~~~~~p~--------~Is~~wpgL---P~~ID--AA~~~~~~~yfFkG~ 81 (219)
T 1hxn_A 27 NHGATYVFSGSHYWRLDTNRDGWHSW--------PIAHQWPQG---PSTVD--AAFSWEDKLYLIQDT 81 (219)
T ss_dssp TTSCEEEEETTEEEESSSSSCTTCCE--------EGGGTCTTS---CSSCS--EEEEETTEEEEEETT
T ss_pred CCCcEEEEeCCEEEEEcCCCCCCCce--------EhhhhccCC---CCCcc--EEEEECCcEEEecCC
Confidence 47899999774211111 001111 234456543 43322 444559999999774
No 248
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=60.54 E-value=79 Score=30.67 Aligned_cols=56 Identities=16% Similarity=0.252 Sum_probs=31.1
Q ss_pred eEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCC------CceeEEEECCEEEEEc
Q 016413 223 ATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGG------PHRACFVFNDRLFVVG 289 (390)
Q Consensus 223 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~------~~~~~~~~~~~iyv~G 289 (390)
+-++.++.||+..... .+.++|. ......|+.-...+... ...+.++.+++||+..
T Consensus 63 ~P~v~~g~vyv~~~~~------~v~AlD~-----~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t 124 (582)
T 1flg_A 63 QAIVSDGVIYVTASYS------RLFALDA-----KTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGT 124 (582)
T ss_dssp CCEEETTEEEEEETTT------EEEEEES-----SSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEE
T ss_pred ccEEECCEEEEEcCCC------CEEEEEC-----CCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEe
Confidence 3467899999986532 1344442 13445687754332210 1124567888888753
No 249
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=60.33 E-value=68 Score=26.12 Aligned_cols=22 Identities=5% Similarity=0.039 Sum_probs=15.4
Q ss_pred EEEEeCCEEEEEeceeCCCCCCCCceEEEEEC
Q 016413 173 GVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (390)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (390)
+++..++++|+|-| +.+|+++.
T Consensus 10 A~~~~~g~~~fFkg----------~~~w~~~~ 31 (196)
T 3c7x_A 10 TVAMLRGEMFVFKE----------RWFWRVRN 31 (196)
T ss_dssp EEEEETTEEEEEET----------TEEEEEET
T ss_pred EEEEcCCEEEEEEC----------CEEEEEEC
Confidence 34467899999976 44677754
No 250
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=59.33 E-value=1.4e+02 Score=29.41 Aligned_cols=209 Identities=11% Similarity=0.048 Sum_probs=95.0
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-CCEEEEEeceeCCC--------CCCCCce
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQ--------CRGPTSR 198 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~~~iyv~GG~~~~~--------~~~~~~~ 198 (390)
+++.++++...... ....++++|+.+.+...... +. .. ..+++.. +++.++++..+... .......
T Consensus 135 Dg~~la~~~~~~G~-~~~~i~v~d~~tg~~~~~~~-~~--~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 209 (710)
T 2xdw_A 135 DGEYFAYGLSASGS-DWVTIKFMKVDGAKELPDVL-ER--VK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQK 209 (710)
T ss_dssp TSSEEEEEEEETTC-SCEEEEEEETTTTEEEEEEE-EE--EC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCE
T ss_pred CCCEEEEEEcCCCC-ceEEEEEEECCCCCCCcccc-cC--cc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCE
Confidence 55555554332111 12369999999998765321 11 11 1123332 55444444433220 0011456
Q ss_pred EEEEECCCCCeE--eCCCCC-CCCCCceEE-EECCEEEEEccCCCCCCCCCcceEEeeeecccccc------C--CeEEc
Q 016413 199 TFVLDSETRKWD--SIPPLP-SPRYSPATQ-LWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALE------K--AWRTE 266 (390)
Q Consensus 199 v~~yd~~~~~W~--~~~~~p-~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~------~--~W~~~ 266 (390)
++++++.+..-+ .+...+ .+....... .-+++..++...........+..+++ .+ . .++.+
T Consensus 210 v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~-------~~~~~~~~~~~~~~~l 282 (710)
T 2xdw_A 210 LYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDL-------QQESNGITGILKWVKL 282 (710)
T ss_dssp EEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEG-------GGSSSSSCSSCCCEEE
T ss_pred EEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEEC-------cccccccCCccceEEe
Confidence 899998876532 221222 122222222 22444333333221111233444442 22 2 57666
Q ss_pred cCCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCC---CeEECCCCCCCCCcceeE
Q 016413 267 IPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEM---KWKVLPPMPKPNSHIECA 342 (390)
Q Consensus 267 ~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~---~W~~~~~~~~~~~~~~~~ 342 (390)
..-..... .....-+++||+.+..+.. ...++.+| .+. .|+.+.+-.. .... ..
T Consensus 283 ~~~~~~~~-~~~s~dg~~l~~~s~~~~~-------------------~~~l~~~d~~~~~~~~~~~l~~~~~-~~~~-~~ 340 (710)
T 2xdw_A 283 IDNFEGEY-DYVTNEGTVFTFKTNRHSP-------------------NYRLINIDFTDPEESKWKVLVPEHE-KDVL-EW 340 (710)
T ss_dssp ECSSSSCE-EEEEEETTEEEEEECTTCT-------------------TCEEEEEETTSCCGGGCEEEECCCS-SCEE-EE
T ss_pred eCCCCcEE-EEEeccCCEEEEEECCCCC-------------------CCEEEEEeCCCCCcccceeccCCCC-CCeE-EE
Confidence 44222221 2233456778888654321 13488888 443 5877643211 1111 12
Q ss_pred EEEE-CCEEEEEcCCCCCCCcceeeEEeeeEEEeecCcc
Q 016413 343 WVIV-NNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSL 380 (390)
Q Consensus 343 ~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 380 (390)
+... ++++++....++.. .++++|+.++
T Consensus 341 ~~~~~~~~lv~~~~~~g~~----------~l~~~~~~~g 369 (710)
T 2xdw_A 341 VACVRSNFLVLCYLHDVKN----------TLQLHDLATG 369 (710)
T ss_dssp EEEETTTEEEEEEEETTEE----------EEEEEETTTC
T ss_pred EEEEcCCEEEEEEEECCEE----------EEEEEECCCC
Confidence 3445 67777776544332 4777776443
No 251
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=58.36 E-value=90 Score=26.90 Aligned_cols=94 Identities=9% Similarity=0.153 Sum_probs=49.2
Q ss_pred ccccccCCCCeEECCCCCCcCCCceEEEE-CCEEEEEecCCCCCCCCCeEEEEeCCCC---ceeecCC----CCCCCCCc
Q 016413 99 FADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDN---KWVDRFD----MPKDMAHS 170 (390)
Q Consensus 99 ~~~~~~~~~~W~~~~~~~~~R~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~---~W~~~~~----l~~~~~r~ 170 (390)
++.++..+.+.+.+...+..+.....+.. ++.+|+.-- ....++++|+.+. .|..-+. .+...-..
T Consensus 97 v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~------~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~ 170 (306)
T 2p4o_A 97 VVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADS------YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPA 170 (306)
T ss_dssp EEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEET------TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCS
T ss_pred EEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEEC------CCCeEEEEeCCCCcEeEEEECCccccccccCCCCc
Confidence 66677666666655544444443333322 456777531 1246999998764 2311111 11100011
Q ss_pred ceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCC
Q 016413 171 HLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (390)
Q Consensus 171 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (390)
..++...++.||+.-- ..+.+++||+..
T Consensus 171 pngis~dg~~lyv~d~--------~~~~I~~~~~~~ 198 (306)
T 2p4o_A 171 ANGLKRFGNFLYVSNT--------EKMLLLRIPVDS 198 (306)
T ss_dssp EEEEEEETTEEEEEET--------TTTEEEEEEBCT
T ss_pred CCCcCcCCCEEEEEeC--------CCCEEEEEEeCC
Confidence 2233445678998742 256799999864
No 252
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=56.48 E-value=1.1e+02 Score=27.48 Aligned_cols=61 Identities=13% Similarity=0.184 Sum_probs=32.5
Q ss_pred CCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEe
Q 016413 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (390)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (390)
++.+++.|+. -..+..||+.+.+-...-..+........+.+ ++.+++.|+.+ ..+..|++
T Consensus 181 ~~~~l~~~~~--------d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~ 243 (437)
T 3gre_A 181 EKSLLVALTN--------LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-----GIIDIWDI 243 (437)
T ss_dssp SCEEEEEEET--------TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-----SCEEEEET
T ss_pred CCCEEEEEeC--------CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-----CeEEEEEc
Confidence 4677777764 34688899877653221111101111222222 56677777654 35777775
No 253
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=55.85 E-value=1e+02 Score=27.37 Aligned_cols=99 Identities=4% Similarity=-0.010 Sum_probs=49.4
Q ss_pred eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCC--CCCCCCCCceEE--EECCEEEEEccCCCCCCCCCcceEEee
Q 016413 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP--PLPSPRYSPATQ--LWRGRLHVMGGSKENRHTPGLEHWSIA 252 (390)
Q Consensus 177 ~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~~~ 252 (390)
-++..++.++.++.. ...++.+|.......... .+......-.++ .-++++++.|+.+ ..+..||+
T Consensus 229 pdg~~l~~~s~d~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D-----~~V~iwd~- 298 (365)
T 4h5i_A 229 ADDTVLIAASLKKGK----GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND-----NSIALVKL- 298 (365)
T ss_dssp ETTEEEEEEEESSSC----CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT-----SCEEEEET-
T ss_pred CCCCEEEEEecCCcc----eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC-----CEEEEEEC-
Confidence 478888888765532 234666776655443322 111111111122 2267788888764 45778874
Q ss_pred eeccccccCCeEEccCCCCCCC-ceeEEEE--CCEEEEEcCCCC
Q 016413 253 VKDGKALEKAWRTEIPIPRGGP-HRACFVF--NDRLFVVGGQEG 293 (390)
Q Consensus 253 ~~~~~~~~~~W~~~~~~p~~~~-~~~~~~~--~~~iyv~GG~~~ 293 (390)
.+ .+.+..+..... .-.++.+ ++++++.|+.++
T Consensus 299 ------~~--~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 299 ------KD--LSMSKIFKQAHSFAITEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp ------TT--TEEEEEETTSSSSCEEEEEECTTSCEEEEEETTS
T ss_pred ------CC--CcEEEEecCcccCCEEEEEECCCCCEEEEEeCCC
Confidence 22 223322211111 1122222 678888888764
No 254
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=55.49 E-value=1.2e+02 Score=27.41 Aligned_cols=194 Identities=14% Similarity=0.083 Sum_probs=97.7
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEE--CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCC--CCCCCCCcceE
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD--MPKDMAHSHLG 173 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~--l~~~~~r~~~~ 173 (390)
.+..+++.....+.+.+ ....-.+++.. ++.||+.--. ...++++++.+...+.+.. +..| .+
T Consensus 97 ~I~~i~~~~~~~~~~~~--~~~~~~gl~~d~~~~~ly~~D~~------~~~I~r~~~~g~~~~~~~~~~~~~p-----~g 163 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVT------LDRILRANLNGSNVEEVVSTGLESP-----GG 163 (386)
T ss_dssp CEEEECTTSCCCEEEEC--SCSCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCCEEEEECSSCSCC-----CC
T ss_pred cceeeccCCCcEEEEec--CCCccEEEEEecCCCeEEEEeCC------CCcEEEEecCCCCcEEEEeCCCCCc-----cE
Confidence 34555555544443322 11122333333 5789987321 2469999998877655422 2222 23
Q ss_pred EEE--eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCC--CCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcc
Q 016413 174 VVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP--PLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLE 247 (390)
Q Consensus 174 ~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 247 (390)
+++ .++.||+.-. ....++++++....-+.+. .+..| ..+++. ++.||+.--.. ...++
T Consensus 164 lavd~~~g~lY~~d~--------~~~~I~~~~~dg~~~~~l~~~~l~~P---~giavdp~~g~ly~td~~~----~~~I~ 228 (386)
T 3v65_B 164 LAVDWVHDKLYWTDS--------GTSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIE 228 (386)
T ss_dssp EEEETTTTEEEEEET--------TTTEEEECBTTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEECSS----SCEEE
T ss_pred EEEEeCCCeEEEEcC--------CCCeEEEEeCCCCceEEeecCCCCCC---cEEEEEcCCCeEEEeccCC----CCEEE
Confidence 344 4789999852 1457888888765433332 22222 233443 67899874221 13444
Q ss_pred eEEeeeeccccccCCeEEccCCCCCCCceeEEE--ECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCC
Q 016413 248 HWSIAVKDGKALEKAWRTEIPIPRGGPHRACFV--FNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEM 324 (390)
Q Consensus 248 ~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~ 324 (390)
++++ ....-+.+.... .....+.++ .+++||+.-... ..|+++| ...
T Consensus 229 r~~~-------dG~~~~~~~~~~-~~~PnGlavd~~~~~lY~aD~~~----------------------~~I~~~d~dG~ 278 (386)
T 3v65_B 229 ASSM-------DGSGRRIIADTH-LFWPNGLTIDYAGRRMYWVDAKH----------------------HVIERANLDGS 278 (386)
T ss_dssp EEET-------TSCSCEEEECSS-CSCEEEEEEEGGGTEEEEEETTT----------------------TEEEEECTTSC
T ss_pred EEeC-------CCCCcEEEEECC-CCCeeeEEEeCCCCEEEEEECCC----------------------CEEEEEeCCCC
Confidence 4442 222212221111 111124444 378899985433 2488888 433
Q ss_pred -CeEECC-CCCCCCCcceeEEEEECCEEEEEc
Q 016413 325 -KWKVLP-PMPKPNSHIECAWVIVNNSIIITG 354 (390)
Q Consensus 325 -~W~~~~-~~~~~~~~~~~~~~~~~~~l~v~G 354 (390)
.-..+. .++. ..++++.++.||+.-
T Consensus 279 ~~~~~~~~~~~~-----P~giav~~~~ly~td 305 (386)
T 3v65_B 279 HRKAVISQGLPH-----PFAITVFEDSLYWTD 305 (386)
T ss_dssp SCEEEECSSCSS-----EEEEEEETTEEEEEE
T ss_pred eeEEEEECCCCC-----ceEEEEECCEEEEee
Confidence 322322 2332 234566889999985
No 255
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=55.30 E-value=1.6e+02 Score=28.88 Aligned_cols=78 Identities=9% Similarity=-0.026 Sum_probs=42.3
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCC---CCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEEEE
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPK---DMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLD 203 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~---~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd 203 (390)
++++|.+--..+.. ...+|+.+.....|+.+.+... .-...-.+.+. -+++..++.-..... ....++++|
T Consensus 79 G~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~---~~~~i~v~d 153 (695)
T 2bkl_A 79 NGRFFYVRTHKDKE--KAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAA---DEAVLHVID 153 (695)
T ss_dssp TTEEEEEEECTTCS--SCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTC---SCCEEEEEE
T ss_pred CCEEEEEEEcCCCe--EEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCC---ceEEEEEEE
Confidence 56666654322221 3568999888888887754221 10001111222 366666665433221 246899999
Q ss_pred CCCCCeE
Q 016413 204 SETRKWD 210 (390)
Q Consensus 204 ~~~~~W~ 210 (390)
..+.+..
T Consensus 154 l~tg~~~ 160 (695)
T 2bkl_A 154 VDSGEWS 160 (695)
T ss_dssp TTTCCBC
T ss_pred CCCCCCc
Confidence 9998764
No 256
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=52.99 E-value=43 Score=29.00 Aligned_cols=67 Identities=13% Similarity=0.241 Sum_probs=40.6
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-e-CCEEEEEeceeCCCCCCCCceEEEEECC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-D-GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (390)
++++|+.++.+ ..+.++|+.+.+....-+++. ......++. - +..+|+.+.. ...+.+||+.
T Consensus 10 ~~~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~~~v~~~~--------~~~i~~~d~~ 73 (349)
T 1jmx_B 10 GHEYMIVTNYP------NNLHVVDVASDTVYKSCVMPD--KFGPGTAMMAPDNRTAYVLNNH--------YGDIYGIDLD 73 (349)
T ss_dssp TCEEEEEEETT------TEEEEEETTTTEEEEEEECSS--CCSSCEEEECTTSSEEEEEETT--------TTEEEEEETT
T ss_pred CCEEEEEeCCC------CeEEEEECCCCcEEEEEecCC--CCCCceeEECCCCCEEEEEeCC--------CCcEEEEeCC
Confidence 67888887654 469999999887644322322 001223333 2 3468887631 3568999998
Q ss_pred CCCeE
Q 016413 206 TRKWD 210 (390)
Q Consensus 206 ~~~W~ 210 (390)
+.+-.
T Consensus 74 t~~~~ 78 (349)
T 1jmx_B 74 TCKNT 78 (349)
T ss_dssp TTEEE
T ss_pred CCcEE
Confidence 77543
No 257
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=47.18 E-value=1.5e+02 Score=26.07 Aligned_cols=184 Identities=12% Similarity=0.105 Sum_probs=0.0
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (390)
++++++.|+.++ +.+||..+.+-........ .........++.+.+.|+.++ .+..+|..+.
T Consensus 30 dg~~la~g~~~~-------~~iw~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~--------~v~iWd~~~~ 91 (355)
T 3vu4_A 30 DQSCLILSTLKS-------FEIYNVHPVAHIMSQEMRH---LSKVRMLHRTNYVAFVTGVKE--------VVHIWDDVKK 91 (355)
T ss_dssp TSSEEEEECSSE-------EEEEEETTEEEEEEEECSC---CCEEEECTTSSEEEEECSSTT--------EEEEEETTTT
T ss_pred CCCEEEEEcCCE-------EEEEecCCcceeeeeecCC---eEEEEEcCCCCEEEEEECCcc--------EEEEEECCCC
Q ss_pred CeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeEEEECCEEEE
Q 016413 208 KWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFV 287 (390)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv 287 (390)
+.+..+..+-.-.++....+.+++.. ...+..|+ .....+.+..+.. ....++...+.+.+
T Consensus 92 --~~~~~~~~~~~v~~v~~~~~~~~~~~-------~~~i~i~d--------~~~~~~~~~~~~~--~~~~~~~s~~~la~ 152 (355)
T 3vu4_A 92 --QDVSRIKVDAPVKDLFLSREFIVVSY-------GDVISVFK--------FGNPWKRITDDIR--FGGVCEFSNGLLVY 152 (355)
T ss_dssp --EEEEEEECSSCEEEEEECSSEEEEEE-------TTEEEEEE--------SSTTCCBSSCCEE--EEEEEEEETTEEEE
T ss_pred --cEEEEEECCCceEEEEEcCCEEEEEE-------cCEEEEEE--------CCCCceeeEEecc--CCceEEEEccEEEE
Q ss_pred E-cCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCC-------------eEE-CCCCCCCCCcceeEEEEECCEEE
Q 016413 288 V-GGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMK-------------WKV-LPPMPKPNSHIECAWVIVNNSII 351 (390)
Q Consensus 288 ~-GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~-------------W~~-~~~~~~~~~~~~~~~~~~~~~l~ 351 (390)
. |+.++. |.++| .+.. ... +..+........+.....+++++
T Consensus 153 ~sg~~~g~----------------------v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l 210 (355)
T 3vu4_A 153 SNEFNLGQ----------------------IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMV 210 (355)
T ss_dssp EESSCTTC----------------------EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEE
T ss_pred eCCCcCcE----------------------EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEE
Q ss_pred EEcCCCCCCCcceeeEEeeeEEEeecCccc
Q 016413 352 ITGGTTEKHPMTKRMILVGEVFQFHLDSLV 381 (390)
Q Consensus 352 v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 381 (390)
+.|+.++.. +.+||+.+.+
T Consensus 211 ~s~s~d~~~-----------v~iwd~~~~~ 229 (355)
T 3vu4_A 211 ATCSQDGTI-----------IRVFKTEDGV 229 (355)
T ss_dssp EEEETTCSE-----------EEEEETTTCC
T ss_pred EEEeCCCCE-----------EEEEECCCCc
No 258
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=45.94 E-value=1.7e+02 Score=26.30 Aligned_cols=101 Identities=8% Similarity=-0.087 Sum_probs=49.9
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEE-CCEEEEEecCCCC---CCCCCeEEEEeCCCCceeecCCCC-C------C
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSL---DYVHSHVDVYNFTDNKWVDRFDMP-K------D 166 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~-~~~lyv~GG~~~~---~~~~~~v~~yd~~~~~W~~~~~l~-~------~ 166 (390)
.+..+|..+.+ .+..++.....+-+..- +.++||.--.... ....+.+.+||+.+.+=...-+++ . .
T Consensus 48 ~v~v~D~~t~~--~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGS--ILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCe--EEEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 56777776554 33334433222222222 4478887532111 112356889999875432211121 0 0
Q ss_pred CCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCCCe
Q 016413 167 MAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKW 209 (390)
Q Consensus 167 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W 209 (390)
.++ ...+.-.+..||+..- ...+.+.++| .+.+=
T Consensus 126 ~p~-~~~~spDG~~l~v~n~-------~~~~~v~viD-~t~~~ 159 (373)
T 2mad_H 126 YSW-MNANTPNNADLLFFQF-------AAGPAVGLVV-QGGSS 159 (373)
T ss_pred Ccc-ceEECCCCCEEEEEec-------CCCCeEEEEE-CCCCE
Confidence 112 2233335677888742 1136688899 77654
No 259
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=44.68 E-value=2e+02 Score=26.94 Aligned_cols=72 Identities=14% Similarity=0.123 Sum_probs=38.1
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCC----ceeecC---CC--CCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCce
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDN----KWVDRF---DM--PKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSR 198 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~----~W~~~~---~l--~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 198 (390)
..+|||-|..+ +.+.++|..++ +=...- .+ +...++-++..+.-++ |||..--+..+ .....
T Consensus 95 r~~l~v~~l~s------~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g--~~~g~ 165 (462)
T 2ece_A 95 RRFLIVPGLRS------SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEG--EGPGG 165 (462)
T ss_dssp SCEEEEEBTTT------CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTS--CSCCE
T ss_pred CCEEEEccCCC------CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCC--CCCCe
Confidence 34677766554 45999998777 221111 01 0011233333444566 88843222222 23578
Q ss_pred EEEEECCCCC
Q 016413 199 TFVLDSETRK 208 (390)
Q Consensus 199 v~~yd~~~~~ 208 (390)
+.++|.++.+
T Consensus 166 v~vlD~~T~~ 175 (462)
T 2ece_A 166 ILMLDHYSFE 175 (462)
T ss_dssp EEEECTTTCC
T ss_pred EEEEECCCCe
Confidence 9999998765
No 260
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=43.76 E-value=1.6e+02 Score=25.52 Aligned_cols=198 Identities=12% Similarity=0.028 Sum_probs=94.2
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEE--CCEEEEEecCCCCCCCCCeEEEEeCCC----Cceeec-C-CCCCCCCC
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTD----NKWVDR-F-DMPKDMAH 169 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~----~~W~~~-~-~l~~~~~r 169 (390)
.+...+..+.+...+- +....-.+++.- +++||+.--. ...+.++|+.+ ..-..+ . .+..
T Consensus 11 ~I~~i~~~~~~~~~~~--~~~~~p~g~~~d~~~~~ly~~D~~------~~~I~~~~~~g~~~~~~~~~~~~~~~~~---- 78 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLI--PNLRNVVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRDIQA---- 78 (316)
T ss_dssp SEEEEETTSCCCEEEE--CSCSSEEEEEEETTTTEEEEEETT------TTEEEEEEC--------CEEEECSSCSC----
T ss_pred eEEEEECCCcceEehh--cCCCceEEEEEEeCCCEEEEEECC------CCcEEEEECCCCCCCcccEEEEeCCCCC----
Confidence 3445555555444331 111222344443 5789998542 24689999876 222222 1 1222
Q ss_pred cceEEEE--eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCC--CCCCCCCCceEEE--ECCEEEEEccCCCCCCC
Q 016413 170 SHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP--PLPSPRYSPATQL--WRGRLHVMGGSKENRHT 243 (390)
Q Consensus 170 ~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~ 243 (390)
-.++++ .++.||+.-. ....++++|+....=+.+. .+..| ..+++ .++.||+..-.. .
T Consensus 79 -p~glavd~~~~~ly~~d~--------~~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~~----~ 142 (316)
T 1ijq_A 79 -PDGLAVDWIHSNIYWTDS--------VLGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT----P 142 (316)
T ss_dssp -CCEEEEETTTTEEEEEET--------TTTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECSS----S
T ss_pred -cCEEEEeecCCeEEEEEC--------CCCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccCC----C
Confidence 224444 4789999842 1467889998765433332 22222 23344 368899885211 1
Q ss_pred CCcceEEeeeeccccccCCeEEccCCCCCCCceeEEEE--CCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC
Q 016413 244 PGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF--NDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD 321 (390)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 321 (390)
..+.++++ ....-+.+..... ....+.++- +++||+.-... ..|+++|
T Consensus 143 ~~I~~~~~-------dG~~~~~~~~~~~-~~P~gla~d~~~~~lY~~D~~~----------------------~~I~~~d 192 (316)
T 1ijq_A 143 AKIKKGGL-------NGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSKL----------------------HSISSID 192 (316)
T ss_dssp CEEEEEET-------TSCCEEEEECSSC-SCEEEEEEETTTTEEEEEETTT----------------------TEEEEEE
T ss_pred CeEEEEcC-------CCCCeEEEEECCC-CCceEEEEeccCCEEEEEECCC----------------------CeEEEEe
Confidence 23444442 2221122211111 111244444 68899986533 2488887
Q ss_pred -CCCCeEECCCCCCCCCcceeEEEEECCEEEEEc
Q 016413 322 -DEMKWKVLPPMPKPNSHIECAWVIVNNSIIITG 354 (390)
Q Consensus 322 -~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~v~G 354 (390)
....-+.+..... ...+..++++.++.||+.-
T Consensus 193 ~dg~~~~~~~~~~~-~~~~P~giav~~~~ly~~d 225 (316)
T 1ijq_A 193 VNGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTD 225 (316)
T ss_dssp TTSCSCEEEEECTT-TTSSEEEEEEETTEEEEEE
T ss_pred cCCCceEEEeecCC-ccCCcEEEEEECCEEEEEE
Confidence 4332222221111 1112344566789999975
No 261
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=43.75 E-value=72 Score=29.50 Aligned_cols=47 Identities=15% Similarity=0.179 Sum_probs=29.1
Q ss_pred CCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEE---CCEEEEEcc
Q 016413 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW---RGRLHVMGG 236 (390)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG 236 (390)
++.||+.-- ...+.++|+.+...+.+.+. ......+.+ ++.|||...
T Consensus 149 ~g~Lyv~d~---------~~~I~~id~~~~~v~~~~~~---~~~P~~ia~d~~G~~lyvad~ 198 (430)
T 3tc9_A 149 HNHLYLVGE---------QHPTRLIDFEKEYVSTVYSG---LSKVRTICWTHEADSMIITND 198 (430)
T ss_dssp EEEEEEEEB---------TEEEEEEETTTTEEEEEECC---CSCEEEEEECTTSSEEEEEEC
T ss_pred CCeEEEEeC---------CCcEEEEECCCCEEEEEecC---CCCcceEEEeCCCCEEEEEeC
Confidence 578999842 16789999998887776441 111222222 345999864
No 262
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=41.29 E-value=1.9e+02 Score=25.59 Aligned_cols=197 Identities=15% Similarity=0.064 Sum_probs=98.6
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEE--CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEE
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV 175 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~ 175 (390)
.+...++.....+.+.+ ....-.+++.- ++.||+.--. ...+.++++.+..-+.+..... ..-.+++
T Consensus 54 ~I~~i~~~g~~~~~~~~--~~~~~~~l~~d~~~~~ly~~D~~------~~~I~r~~~~g~~~~~~~~~~~---~~p~gla 122 (349)
T 3v64_C 54 DIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVT------LDRILRANLNGSNVEEVVSTGL---ESPGGLA 122 (349)
T ss_dssp CEEEECTTSCCEEEEEC--SCSCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECSSC---SCCCEEE
T ss_pred ceEEEeCCCCeeEEeec--CCCceEEEEEeccccEEEEEecc------CCceEEEecCCCCceEEEeCCC---CCccEEE
Confidence 34555555555544322 11112233332 5789987321 2469999998876554422111 1112344
Q ss_pred E--eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCC--CCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceE
Q 016413 176 S--DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP--PLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHW 249 (390)
Q Consensus 176 ~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 249 (390)
+ .++.||+.-. ....++++++....-+.+. .+..| ..+++. ++.||+..-.. ...++++
T Consensus 123 vd~~~g~ly~~d~--------~~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~~----~~~I~r~ 187 (349)
T 3v64_C 123 VDWVHDKLYWTDS--------GTSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEAS 187 (349)
T ss_dssp EETTTTEEEEEET--------TTTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECSS----SCEEEEE
T ss_pred EecCCCeEEEEcC--------CCCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccCC----CCEEEEE
Confidence 4 4789999842 1467899998765433332 22222 233443 67899885321 1344554
Q ss_pred EeeeeccccccCCeEEccCCCCCCCceeEEEE--CCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCC-C
Q 016413 250 SIAVKDGKALEKAWRTEIPIPRGGPHRACFVF--NDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEM-K 325 (390)
Q Consensus 250 ~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~-~ 325 (390)
++ ....-+.+.... .....+.++- +++||+.-... ..|+++| ... .
T Consensus 188 ~~-------dG~~~~~~~~~~-~~~PnGla~d~~~~~lY~aD~~~----------------------~~I~~~~~dG~~~ 237 (349)
T 3v64_C 188 SM-------DGSGRRIIADTH-LFWPNGLTIDYAGRRMYWVDAKH----------------------HVIERANLDGSHR 237 (349)
T ss_dssp ET-------TSCSCEESCCSS-CSCEEEEEEETTTTEEEEEETTT----------------------TEEEEEETTSCSC
T ss_pred eC-------CCCCcEEEEECC-CCCcceEEEeCCCCEEEEEECCC----------------------CEEEEEeCCCCce
Confidence 42 222222221111 1111244443 78899985432 2388887 433 2
Q ss_pred eEECC-CCCCCCCcceeEEEEECCEEEEEcC
Q 016413 326 WKVLP-PMPKPNSHIECAWVIVNNSIIITGG 355 (390)
Q Consensus 326 W~~~~-~~~~~~~~~~~~~~~~~~~l~v~GG 355 (390)
-..+. .+.. ..++++.++.||+.--
T Consensus 238 ~~~~~~~~~~-----P~giav~~~~ly~td~ 263 (349)
T 3v64_C 238 KAVISQGLPH-----PFAITVFEDSLYWTDW 263 (349)
T ss_dssp EEEECSSCSS-----EEEEEEETTEEEEEET
T ss_pred EEEEeCCCCC-----ceEEEEECCEEEEecC
Confidence 22222 2322 2345568899999853
No 263
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=40.84 E-value=90 Score=31.22 Aligned_cols=154 Identities=10% Similarity=0.103 Sum_probs=74.8
Q ss_pred CceEEEEECCC--CCeEeCCCCCCCCCCceEEEECCEEEEEccCCCC-----CCCCCcceEEeeeeccccc---cCCeEE
Q 016413 196 TSRTFVLDSET--RKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKEN-----RHTPGLEHWSIAVKDGKAL---EKAWRT 265 (390)
Q Consensus 196 ~~~v~~yd~~~--~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-----~~~~~~~~~~~~~~~~~~~---~~~W~~ 265 (390)
.+.++..|... ..|.++ .+| +...-....++.+|+....+-. .....+...++ .++.+. ...|+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~l-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~ 342 (711)
T 4hvt_A 268 NYDNYILDTKYKNLKLQKI-NMP--SDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHF--TDLLKTESDKTSLKI 342 (711)
T ss_dssp CEEEEEEECSSSSCEEEEC-CSC--TTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEG--GGGGSCGGGCTTCEE
T ss_pred ceeEEEEcCCCCCCcceEe-ecC--CcceEeeeECCEEEEEECcccccccccCCCCeEEEEEC--CcccccccccccceE
Confidence 47778777653 557777 233 3322245779999998643210 01222333332 111111 357987
Q ss_pred -ccCCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEEC--CCCCCCCCccee
Q 016413 266 -EIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVL--PPMPKPNSHIEC 341 (390)
Q Consensus 266 -~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~--~~~~~~~~~~~~ 341 (390)
+.+-+. ..--+....++.|++..-.++ ...++++| .+..|... -.+|.. .. +
T Consensus 343 ~~~~~~~-~~l~~~~~~~~~l~~~~~~~~--------------------~~~l~~~~~~~g~~~~~~~i~lp~~-~~--~ 398 (711)
T 4hvt_A 343 LFTPTAN-EVFNFISTTKDRVFLATYDNV--------------------VAKVVTFTLENEQWTKPVVLKLPYQ-NA--I 398 (711)
T ss_dssp EECCCTT-EEEEEEEECSSCEEEEEEETT--------------------EEEEEEECEETTEECCCEEECCCST-TC--E
T ss_pred EECCCCC-CeEEEEEEECCEEEEEEEECC--------------------EEEEEEEECCCCceEEEeccCCCCC-eE--E
Confidence 444332 222245566777777643332 23488888 56666432 124322 11 1
Q ss_pred EEEE--EC-CEEEE-EcCCCCCCCcceeeEEeeeEEEeecCccceeeccCCC
Q 016413 342 AWVI--VN-NSIII-TGGTTEKHPMTKRMILVGEVFQFHLDSLVIIYHYRPP 389 (390)
Q Consensus 342 ~~~~--~~-~~l~v-~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~P 389 (390)
.... .+ +.+++ +.+..... +++.||+. .++..+...|
T Consensus 399 ~~~~~~~~~~~~~~~~ss~~~P~----------~~~~~d~~-~~~~~l~~~~ 439 (711)
T 4hvt_A 399 FGMSSYEEEEEALITIENSIVPP----------TIYLWVKT-HELKIIRKAL 439 (711)
T ss_dssp EEEECCTTCSCEEEEEECSSSCC----------EEEEECTT-SCEEEEECCS
T ss_pred EEEeecCcCCEEEEEEecCCCCC----------EEEEEeCC-CcEEEEecCC
Confidence 1122 22 33333 33333222 68888887 6666655443
No 264
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=40.31 E-value=1.8e+02 Score=24.99 Aligned_cols=57 Identities=12% Similarity=0.096 Sum_probs=29.3
Q ss_pred cceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEECCEEEEEccC
Q 016413 170 SHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGS 237 (390)
Q Consensus 170 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 237 (390)
..|++++.++.+|.+|-........+.. .......+. . -..|+++.-++++|.+|--
T Consensus 150 ~~~~~~l~~G~v~~wG~n~~gqlg~p~~-------~~~~v~~i~---~-G~~hs~al~~G~v~~wG~n 206 (282)
T 3qhy_B 150 VYTALAVKNGGVIAWGDNYFGQTTVPAE-------AQSGVDDVA---G-GIFHSLALKDGKVIAWGDN 206 (282)
T ss_dssp SSEEEEEETTEEEEEECCTTSTTSCCGG-------GGSSEEEEE---E-CSSEEEEEETTEEEEEECC
T ss_pred cCEEEEEECCEEEEecCCCCCCCCCcee-------cCCCeEEEE---e-cCCEEEEEECCeEEEEECC
Confidence 3556666699999998532211100000 011122221 1 2345555578999999853
No 265
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=40.16 E-value=2.1e+02 Score=27.92 Aligned_cols=76 Identities=4% Similarity=-0.183 Sum_probs=37.7
Q ss_pred CCEEEEEecCCCCC---CCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEEC
Q 016413 128 KNLFYVFAGYGSLD---YVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (390)
Q Consensus 128 ~~~lyv~GG~~~~~---~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (390)
+++.++++..+... .....++++|+.+.+-..+........+.......-+++..+++. ...++++|.
T Consensus 71 Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~---------~~~i~~~~~ 141 (723)
T 1xfd_A 71 DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF---------ENNIYYCAH 141 (723)
T ss_dssp TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE---------TTEEEEESS
T ss_pred CCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEE---------CCeEEEEEC
Confidence 56666666543221 123679999999887655544322101111111122444444433 135777777
Q ss_pred CCCCeEeC
Q 016413 205 ETRKWDSI 212 (390)
Q Consensus 205 ~~~~W~~~ 212 (390)
.+..-..+
T Consensus 142 ~~g~~~~~ 149 (723)
T 1xfd_A 142 VGKQAIRV 149 (723)
T ss_dssp SSSCCEEE
T ss_pred CCCceEEE
Confidence 66555444
No 266
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=37.79 E-value=1.1e+02 Score=26.61 Aligned_cols=94 Identities=7% Similarity=-0.023 Sum_probs=46.5
Q ss_pred cccccccCCCCeEECCCCCCc----CCCceEEEECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceE
Q 016413 98 TFADLPAPDLEWEQMPSAPVP----RLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLG 173 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~----R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~ 173 (390)
.++.+|+.+.+.+.+...+.. +....++.-++++|+.............+++|| +.+...+.. .... ..+
T Consensus 110 gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~---~~~~-~~~ 183 (326)
T 2ghs_A 110 GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA---DISI-PNS 183 (326)
T ss_dssp EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE---EESS-EEE
T ss_pred CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC---CCcc-cCC
Confidence 578888877777665433211 111111222567777432111111235689998 455544321 0011 123
Q ss_pred EEEe-CC-EEEEEeceeCCCCCCCCceEEEEECC
Q 016413 174 VVSD-GR-YIYIVSGQYGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 174 ~~~~-~~-~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (390)
.+.. ++ .||+... ....+++||..
T Consensus 184 i~~s~dg~~lyv~~~--------~~~~I~~~d~~ 209 (326)
T 2ghs_A 184 ICFSPDGTTGYFVDT--------KVNRLMRVPLD 209 (326)
T ss_dssp EEECTTSCEEEEEET--------TTCEEEEEEBC
T ss_pred eEEcCCCCEEEEEEC--------CCCEEEEEEcc
Confidence 3332 34 6787642 13578888865
No 267
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=37.70 E-value=3.4e+02 Score=27.46 Aligned_cols=168 Identities=13% Similarity=0.067 Sum_probs=85.3
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCC----ceeec-C-CCCCCCCCcceEEEE--eCCEEEEEeceeCCCCCCCCceE
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDN----KWVDR-F-DMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRT 199 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~----~W~~~-~-~l~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v 199 (390)
+++||+.-.. ...|.++++... ....+ . .+..| .++++ .+++||+.-. ....|
T Consensus 435 ~~~lY~sD~~------~~~I~~~~l~g~~~~~~~~~vi~~~l~~P-----~GLAvD~~~~~LY~tD~--------~~~~I 495 (791)
T 3m0c_C 435 SNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRDIQAP-----DGLAVDWIHSNIYWTDS--------VLGTV 495 (791)
T ss_dssp TTEEEEEETT------TTEEEEEEC--------CEEEECSSCSCC-----CEEEEETTTTEEEEEET--------TTTEE
T ss_pred CCeeEEeecc------ceeEEEEeccCCCCCcceeEEEecCCCCc-----ceeeeeecCCcEEEEec--------CCCeE
Confidence 5788887432 245788887652 22222 2 22222 23444 4779999842 25679
Q ss_pred EEEECCCCCeEeCC--CCCCCCCCceEEE--ECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEcc--CCCCCC
Q 016413 200 FVLDSETRKWDSIP--PLPSPRYSPATQL--WRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEI--PIPRGG 273 (390)
Q Consensus 200 ~~yd~~~~~W~~~~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~--~~p~~~ 273 (390)
+++++....-+.+. .+..|+ ++++ .++.||+.--.. ...+++.++ ....=+.+. .+..+
T Consensus 496 ~v~~ldG~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD~g~----~~~I~~~~~-------dG~~~~~lv~~~l~~P- 560 (791)
T 3m0c_C 496 SVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWGT----PAKIKKGGL-------NGVDIYSLVTENIQWP- 560 (791)
T ss_dssp EEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEECSS----SCEEEEEET-------TSCCEEEEECSSCSCE-
T ss_pred EEEeCCCCeEEEEEeCCCCCcc---eEEEecCCCCEEEecCCC----CCeEEEEec-------CCCceEEEEeCCCCCc-
Confidence 99999876655543 233332 3344 258899985111 123444442 121112221 12222
Q ss_pred CceeEEEE--CCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CCC-CeEECCCCCCCCCcceeEEEEECCE
Q 016413 274 PHRACFVF--NDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEM-KWKVLPPMPKPNSHIECAWVIVNNS 349 (390)
Q Consensus 274 ~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~-~W~~~~~~~~~~~~~~~~~~~~~~~ 349 (390)
.++++- +++||+.-... ..|+++| ... ....+... . ...+..++++.+++
T Consensus 561 --~GLavD~~~~~LYwaD~~~----------------------~~I~~~d~dG~~~~~v~~~~-~-~l~~P~glav~~~~ 614 (791)
T 3m0c_C 561 --NGITLDLLSGRLYWVDSKL----------------------HSISSIDVNGGNRKTILEDE-K-RLAHPFSLAVFEDK 614 (791)
T ss_dssp --EEEEEETTTTEEEEEETTT----------------------TEEEEEETTSCSCEEEEECT-T-TTSSEEEEEEETTE
T ss_pred --eEEEEecCCCeEEEEeCCC----------------------CcEEEEecCCCceEEEecCC-C-ccCCCCEEEEeCCE
Confidence 134433 68999985432 2488887 433 43433221 0 11223456778999
Q ss_pred EEEEcC
Q 016413 350 IIITGG 355 (390)
Q Consensus 350 l~v~GG 355 (390)
||+.--
T Consensus 615 lYwtD~ 620 (791)
T 3m0c_C 615 VFWTDI 620 (791)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 999853
No 268
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=37.26 E-value=2.4e+02 Score=25.56 Aligned_cols=197 Identities=12% Similarity=0.040 Sum_probs=96.3
Q ss_pred cccccccCCCCeEECCCCCCcCCCceEEEE--CCEEEEEecCCCCCCCCCeEEEEeCCCC----ceeecCCCCCCCCCcc
Q 016413 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDN----KWVDRFDMPKDMAHSH 171 (390)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~----~W~~~~~l~~~~~r~~ 171 (390)
.+...+.....++.+.+ ..+.-.+++.. +++||+.--. ...+.++++... ....+..... ..-
T Consensus 93 ~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~~------~~~I~~~~~~g~~~~~~~~~~~~~~~---~~p 161 (400)
T 3p5b_L 93 EVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRDI---QAP 161 (400)
T ss_dssp EEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEETT------TTEEEEEEC------CCCEEEECSSC---SCE
T ss_pred eeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEecC------CCeEEEEEcccCCCCCcceEEEeCCC---CCc
Confidence 44455555555544321 12222333333 5789987322 245888888752 2222211111 122
Q ss_pred eEEEE--eCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCC--CCCCCCCCceEEE--ECCEEEEEccCCCCCCCCC
Q 016413 172 LGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP--PLPSPRYSPATQL--WRGRLHVMGGSKENRHTPG 245 (390)
Q Consensus 172 ~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~ 245 (390)
.++++ .++.||+.-. ....++++++....-+.+. .+..|+ .+++ .++.||+.--.. ...
T Consensus 162 ~glavD~~~~~lY~~d~--------~~~~I~~~~~~g~~~~~l~~~~~~~P~---~iavdp~~g~ly~td~~~----~~~ 226 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDS--------VLGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWGT----PAK 226 (400)
T ss_dssp EEEEEETTTTEEEEEET--------TTTEEEEECTTTCSEEEEEECSSCCEE---EEEEETTTTEEEEEECSS----SCC
T ss_pred ccEEEEecCCceEEEEC--------CCCeEEEEeCCCCceEEEEeCCCCCcc---eEEEecccCeEEEEeCCC----CCE
Confidence 34444 3799999842 1467889998876654443 222232 3344 368899875211 134
Q ss_pred cceEEeeeeccccccCCeEEc-c-CCCCCCCceeEEEE--CCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC
Q 016413 246 LEHWSIAVKDGKALEKAWRTE-I-PIPRGGPHRACFVF--NDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD 321 (390)
Q Consensus 246 ~~~~~~~~~~~~~~~~~W~~~-~-~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 321 (390)
+++.++ ....=+.+ . .+..+ .+.++- +++||+.-... ..|+++|
T Consensus 227 I~~~~~-------dG~~~~~~~~~~l~~P---~glavd~~~~~lY~aD~~~----------------------~~I~~~d 274 (400)
T 3p5b_L 227 IKKGGL-------NGVDIYSLVTENIQWP---NGITLDLLSGRLYWVDSKL----------------------HSISSID 274 (400)
T ss_dssp EEEEET-------TSCSCEEEECSSCSCE---EEEEEETTTTEEEEEETTT----------------------TEEEEEE
T ss_pred EEEEeC-------CCCccEEEEECCCCce---EEEEEEeCCCEEEEEECCC----------------------CEEEEEe
Confidence 455443 11111112 1 12111 244443 68899985432 2488888
Q ss_pred -CCC-CeEECCCCCCCCCcceeEEEEECCEEEEEc
Q 016413 322 -DEM-KWKVLPPMPKPNSHIECAWVIVNNSIIITG 354 (390)
Q Consensus 322 -~~~-~W~~~~~~~~~~~~~~~~~~~~~~~l~v~G 354 (390)
... ....+.. +. ...+..++++.++.||+.-
T Consensus 275 ~dG~~~~~~~~~-~~-~l~~P~gl~v~~~~lywtd 307 (400)
T 3p5b_L 275 VNGGNRKTILED-EK-RLAHPFSLAVFEDKVFWTD 307 (400)
T ss_dssp TTSCCCEEEEEC-SS-TTSSEEEEEEETTEEEEEE
T ss_pred CCCCccEEEEeC-CC-CCCCCEEEEEeCCEEEEec
Confidence 433 3333321 11 1122345667899999986
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=37.02 E-value=2.3e+02 Score=25.41 Aligned_cols=159 Identities=14% Similarity=0.095 Sum_probs=81.2
Q ss_pred hcccccccCCCCeEECCC--CCCcCCCceEEE--ECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecC--CCCCCCCCc
Q 016413 97 ATFADLPAPDLEWEQMPS--APVPRLDGAAIQ--IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF--DMPKDMAHS 170 (390)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~--~~~~R~~~~~~~--~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~--~l~~~~~r~ 170 (390)
..++++++.....+.+.. +..| .++++ .++.||+.-.. ...++++++....-..+. .+..
T Consensus 138 ~~I~r~~~~g~~~~~~~~~~~~~p---~glavd~~~g~lY~~d~~------~~~I~~~~~dg~~~~~l~~~~l~~----- 203 (386)
T 3v65_B 138 DRILRANLNGSNVEEVVSTGLESP---GGLAVDWVHDKLYWTDSG------TSRIEVANLDGAHRKVLLWQSLEK----- 203 (386)
T ss_dssp TEEEEEETTSCCEEEEECSSCSCC---CCEEEETTTTEEEEEETT------TTEEEECBTTSCSCEEEECSSCSC-----
T ss_pred CcEEEEecCCCCcEEEEeCCCCCc---cEEEEEeCCCeEEEEcCC------CCeEEEEeCCCCceEEeecCCCCC-----
Confidence 356667766655444322 2222 23333 36899997432 246888888765433332 2222
Q ss_pred ceEEEEe--CCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEE--ECCEEEEEccCCCCCCCCCc
Q 016413 171 HLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQL--WRGRLHVMGGSKENRHTPGL 246 (390)
Q Consensus 171 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~ 246 (390)
-.++++. ++.||+.-- .....++++++....=+.+..... ..-.++++ .+++||+.-.. ...+
T Consensus 204 P~giavdp~~g~ly~td~-------~~~~~I~r~~~dG~~~~~~~~~~~-~~PnGlavd~~~~~lY~aD~~-----~~~I 270 (386)
T 3v65_B 204 PRAIALHPMEGTIYWTDW-------GNTPRIEASSMDGSGRRIIADTHL-FWPNGLTIDYAGRRMYWVDAK-----HHVI 270 (386)
T ss_dssp EEEEEEETTTTEEEEEEC-------SSSCEEEEEETTSCSCEEEECSSC-SCEEEEEEEGGGTEEEEEETT-----TTEE
T ss_pred CcEEEEEcCCCeEEEecc-------CCCCEEEEEeCCCCCcEEEEECCC-CCeeeEEEeCCCCEEEEEECC-----CCEE
Confidence 1234443 789998742 113679999987654333321111 11123444 37899998532 2334
Q ss_pred ceEEeeeeccccccCCeEEcc-CCCCCCCceeEEEECCEEEEEcCC
Q 016413 247 EHWSIAVKDGKALEKAWRTEI-PIPRGGPHRACFVFNDRLFVVGGQ 291 (390)
Q Consensus 247 ~~~~~~~~~~~~~~~~W~~~~-~~p~~~~~~~~~~~~~~iyv~GG~ 291 (390)
.++++ + .++.-..+. .++ ...++++.++.||+.--.
T Consensus 271 ~~~d~-----d-G~~~~~~~~~~~~---~P~giav~~~~ly~td~~ 307 (386)
T 3v65_B 271 ERANL-----D-GSHRKAVISQGLP---HPFAITVFEDSLYWTDWH 307 (386)
T ss_dssp EEECT-----T-SCSCEEEECSSCS---SEEEEEEETTEEEEEETT
T ss_pred EEEeC-----C-CCeeEEEEECCCC---CceEEEEECCEEEEeeCC
Confidence 44442 1 122221121 222 224677789999998643
No 270
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=35.72 E-value=2.3e+02 Score=26.20 Aligned_cols=125 Identities=14% Similarity=0.226 Sum_probs=69.0
Q ss_pred CCCCeEe--CCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeE--------EccC-CCCCC
Q 016413 205 ETRKWDS--IPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWR--------TEIP-IPRGG 273 (390)
Q Consensus 205 ~~~~W~~--~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~--------~~~~-~p~~~ 273 (390)
....|++ ++..|..-.-|+.+.+++.-|++|=++++..-..+-.+.+ .+.|. .++. .....
T Consensus 268 ~~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yf--------s~~~~sp~~~vrr~i~sey~~~A 339 (670)
T 3ju4_A 268 HKSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYF--------PDAFNSPSNYVRRQIPSEYEPDA 339 (670)
T ss_dssp TTSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEE--------TTTTTCTTCCEEEECCGGGCTTE
T ss_pred ccCCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEe--------cccccCCcceeeeechhhhcccc
Confidence 4556754 3445555567889999998899986655432223322221 22232 2221 22222
Q ss_pred CceeEEEECCEEEEEc-CCCCCCCCCCCCCccccccccceecCcEEeeC-CCCCeEECCCCCCCCCcceeEEEEECCEEE
Q 016413 274 PHRACFVFNDRLFVVG-GQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHIECAWVIVNNSII 351 (390)
Q Consensus 274 ~~~~~~~~~~~iyv~G-G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~ 351 (390)
...+.-.+++.||+.- |..+.. .=+.+.+-+ ....|+.+. .|........-.+.+++.||
T Consensus 340 sEPCvkyYdgvLyLtTRgt~~~~-----------------~GS~L~rs~d~Gq~w~slr-fp~nvHhtnlPFakvgD~l~ 401 (670)
T 3ju4_A 340 SEPCIKYYDGVLYLITRGTRGDR-----------------LGSSLHRSRDIGQTWESLR-FPHNVHHTTLPFAKVGDDLI 401 (670)
T ss_dssp EEEEEEEETTEEEEEEEESCTTS-----------------CCCEEEEESSTTSSCEEEE-CTTCCCSSCCCEEEETTEEE
T ss_pred ccchhhhhCCEEEEEecCcCCCC-----------------CcceeeeecccCCchhhee-ccccccccCCCcceeCCEEE
Confidence 2345567899999873 333321 112355555 677999863 33333322233478899999
Q ss_pred EEcC
Q 016413 352 ITGG 355 (390)
Q Consensus 352 v~GG 355 (390)
+||-
T Consensus 402 mFgs 405 (670)
T 3ju4_A 402 MFGS 405 (670)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9984
No 271
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis}
Probab=35.67 E-value=1.8e+02 Score=27.73 Aligned_cols=160 Identities=10% Similarity=0.076 Sum_probs=0.0
Q ss_pred ceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEEEE-CCEEEEEccCCCCCCCCCcceE
Q 016413 171 HLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHW 249 (390)
Q Consensus 171 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~ 249 (390)
++++...+|.|++-.-...... .....+..-+-...+|+....++.......++.+ +++|++.--............-
T Consensus 328 G~GI~l~dGrLv~P~~~~~~~g-~~~s~i~~S~D~G~TW~~~~~~~~~~~e~~vve~~dG~L~~~~R~~~~g~r~v~~S~ 406 (523)
T 4fj6_A 328 GRGITMQDGTLVFPIQFIDATR-VPNAGIMYSKDRGKTWHLHNLARTNTTEAQVAEVEPGVLMLNMRDNRGGSRAVATTK 406 (523)
T ss_dssp EECEECTTSCEEEEEEEECTTS-CEEEEEEEESSTTSSCEECCCSEETEEEEEEEEEETTEEEEEEEETTCSBCEEEEES
T ss_pred CcceEEeCCeEEEEEEEEcCCC-CEEEEEEEECCCCCeEEECCCCCccccCCEEEEecCCEEEEEEEecCCCcEEEEEEC
Q ss_pred EeeeeccccccCCeEEcc----CCCCCCCceeEEEEC-------CEEEEEcCCCCCCCCCCCCCccccccccceecCcEE
Q 016413 250 SIAVKDGKALEKAWRTEI----PIPRGGPHRACFVFN-------DRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVY 318 (390)
Q Consensus 250 ~~~~~~~~~~~~~W~~~~----~~p~~~~~~~~~~~~-------~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 318 (390)
| ...+|+... .+|.+.+..+++.+. ..++++..-... ..+..+.--.
T Consensus 407 D--------~G~TWt~~~~~~~~L~~P~c~~Sii~~~~~~~~~g~~~lL~snp~~~--------------~~R~~l~v~~ 464 (523)
T 4fj6_A 407 D--------LGKTWTEHPSSRSALQESVCMASLIKVNAKDNITGKDLLLFSNPNTT--------------KGRNHITIKA 464 (523)
T ss_dssp S--------TTSSCEECTTTTTSSBCSSCCCEEEEECGGGSTTCSCEEEEEEECCS--------------SSSCCEEEEE
T ss_pred C--------CCCccCcCcCccccCCCCCcccEEEEEecccCCCCCcEEEEEccCCC--------------CccccceEEE
Q ss_pred eeCCCCCeEECCCC---CCCCCcceeEEEEECCEEEEE
Q 016413 319 MLDDEMKWKVLPPM---PKPNSHIECAWVIVNNSIIIT 353 (390)
Q Consensus 319 ~yd~~~~W~~~~~~---~~~~~~~~~~~~~~~~~l~v~ 353 (390)
.+|...+|.....+ ..+....++.+..-+++|.++
T Consensus 465 S~D~G~TW~~~~~v~~~~~~~~~Ys~l~~~~dG~i~il 502 (523)
T 4fj6_A 465 SLDGGLTWPTEHQVLLDEAEGWGYSCLSMIDKETVGIF 502 (523)
T ss_dssp ESSTTSCCCGGGEEEEECSCCCCCEEEEECSSSEEEEE
T ss_pred eCCCCCCCccCceEEEcCCCCcccceEEEcCCCEEEEE
No 272
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=34.21 E-value=2.2e+02 Score=25.53 Aligned_cols=85 Identities=11% Similarity=0.050 Sum_probs=44.2
Q ss_pred CCEEEEEecCCC---CCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCC--EEEEEeceeCCCCCCCCceEEE
Q 016413 128 KNLFYVFAGYGS---LDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGR--YIYIVSGQYGPQCRGPTSRTFV 201 (390)
Q Consensus 128 ~~~lyv~GG~~~---~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~--~iyv~GG~~~~~~~~~~~~v~~ 201 (390)
++++||...... .....++|+++|+.+.+= +..++.+ ....++++ -++ .+|+... ..+++.+
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v--v~~i~~g--~~p~~i~~s~Dg~~~l~v~~~--------~~~~V~V 345 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--SSQISLG--HDVDAISVAQDGGPDLYALSA--------GTEVLHI 345 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEE--EEEEECC--CCcCeEEECCCCCeEEEEEcC--------CCCeEEE
Confidence 468999754321 111246799999987654 2233332 12223333 344 4555432 1467999
Q ss_pred EECCCCCeEeCCC-CCCCCCCceEEE
Q 016413 202 LDSETRKWDSIPP-LPSPRYSPATQL 226 (390)
Q Consensus 202 yd~~~~~W~~~~~-~p~~r~~~~~~~ 226 (390)
+|..+.+ .+.. .+.++.-+.+..
T Consensus 346 iD~~t~~--vv~~i~~vG~~P~~~~~ 369 (373)
T 2mad_H 346 YDAGAGD--QDQSTVELGSGPQVLSV 369 (373)
T ss_pred EECCCCC--EEeeecCCCCCCcEEEE
Confidence 9987744 4433 334444444433
No 273
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=31.90 E-value=4.1e+02 Score=26.78 Aligned_cols=133 Identities=15% Similarity=0.068 Sum_probs=73.2
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecC--CCCCCCCCcceEEEE--eCCEEEEEeceeCCCCCCCCceEEEEE
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF--DMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLD 203 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~--~l~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd 203 (390)
+++||+.-.. ...|+++++....-..+. .+..| .++++ .++.||+.-- .....|++++
T Consensus 482 ~~~LY~tD~~------~~~I~v~~ldG~~~~~l~~~~l~~P-----~gIaVDp~~g~LYwtD~-------g~~~~I~~~~ 543 (791)
T 3m0c_C 482 HSNIYWTDSV------LGTVSVADTKGVKRKTLFRENGSKP-----RAIVVDPVHGFMYWTDW-------GTPAKIKKGG 543 (791)
T ss_dssp TTEEEEEETT------TTEEEEEETTSSSEEEEEECTTCCE-----EEEEEETTTTEEEEEEC-------SSSCEEEEEE
T ss_pred CCcEEEEecC------CCeEEEEeCCCCeEEEEEeCCCCCc-----ceEEEecCCCCEEEecC-------CCCCeEEEEe
Confidence 6799997422 356999999876655442 22222 24455 3689999741 1136789998
Q ss_pred CCCCCeEeCCC--CCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCCCCCCCceeEE
Q 016413 204 SETRKWDSIPP--LPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACF 279 (390)
Q Consensus 204 ~~~~~W~~~~~--~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~ 279 (390)
+....=+.+.. +..| .++++- +++||+.-.. ...++++++. .......+.....-....+++
T Consensus 544 ~dG~~~~~lv~~~l~~P---~GLavD~~~~~LYwaD~~-----~~~I~~~d~d------G~~~~~v~~~~~~l~~P~gla 609 (791)
T 3m0c_C 544 LNGVDIYSLVTENIQWP---NGITLDLLSGRLYWVDSK-----LHSISSIDVN------GGNRKTILEDEKRLAHPFSLA 609 (791)
T ss_dssp TTSCCEEEEECSSCSCE---EEEEEETTTTEEEEEETT-----TTEEEEEETT------SCSCEEEEECTTTTSSEEEEE
T ss_pred cCCCceEEEEeCCCCCc---eEEEEecCCCeEEEEeCC-----CCcEEEEecC------CCceEEEecCCCccCCCCEEE
Confidence 87654433322 2222 223333 7899999532 2345555431 233333332211112234777
Q ss_pred EECCEEEEEcCCC
Q 016413 280 VFNDRLFVVGGQE 292 (390)
Q Consensus 280 ~~~~~iyv~GG~~ 292 (390)
+.+++||+.-..+
T Consensus 610 v~~~~lYwtD~~~ 622 (791)
T 3m0c_C 610 VFEDKVFWTDIIN 622 (791)
T ss_dssp EETTEEEEEETTT
T ss_pred EeCCEEEEEECCC
Confidence 8899999986543
No 274
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=31.79 E-value=73 Score=29.17 Aligned_cols=70 Identities=11% Similarity=0.160 Sum_probs=41.8
Q ss_pred CCEEEEEec---CCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCC--EEEEEeceeCCCCCCCCceEEE
Q 016413 128 KNLFYVFAG---YGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGR--YIYIVSGQYGPQCRGPTSRTFV 201 (390)
Q Consensus 128 ~~~lyv~GG---~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~--~iyv~GG~~~~~~~~~~~~v~~ 201 (390)
++++||.-+ ....+..-+.|+++|+++.+-... ++.+ ..-.++++ -++ .+|+.-+. .+++.+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~--i~vg--~~~~~lavs~D~~~~ly~tn~~--------~~~VsV 358 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAK--FEMG--HEIDSINVSQDEKPLLYALSTG--------DKTLYI 358 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE--EEEE--EEECEEEECSSSSCEEEEEETT--------TTEEEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEE--EECC--CCcceEEECCCCCeEEEEEcCC--------CCeEEE
Confidence 578999743 222222346899999998775432 3322 12223443 344 57776431 577899
Q ss_pred EECCCCCe
Q 016413 202 LDSETRKW 209 (390)
Q Consensus 202 yd~~~~~W 209 (390)
||..+.+-
T Consensus 359 iD~~t~k~ 366 (386)
T 3sjl_D 359 HDAESGEE 366 (386)
T ss_dssp EETTTCCE
T ss_pred EECCCCcE
Confidence 99988764
No 275
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=31.30 E-value=2.2e+02 Score=23.44 Aligned_cols=15 Identities=13% Similarity=0.251 Sum_probs=11.4
Q ss_pred eEEEECCEEEEEccC
Q 016413 223 ATQLWRGRLHVMGGS 237 (390)
Q Consensus 223 ~~~~~~~~iyv~GG~ 237 (390)
++...++++|+|=|.
T Consensus 35 Ai~~~~g~~~fFkg~ 49 (218)
T 1gen_A 35 GIAQIRGEIFFFKDR 49 (218)
T ss_dssp EEEEETTEEEEEETT
T ss_pred EEEeCCCcEEEEECC
Confidence 455679999999774
No 276
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=29.37 E-value=2.4e+02 Score=23.43 Aligned_cols=60 Identities=13% Similarity=0.233 Sum_probs=36.6
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeec----C-CCCC----CCCCcceEEEE--eCCEEEEEeceeCCCCCCCC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDR----F-DMPK----DMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPT 196 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~----~-~l~~----~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~ 196 (390)
++++|+|-| +..|+||..+++...- . ..|. +.+..--++.. .++++|.|-|
T Consensus 127 ~gk~yfFkG--------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG---------- 188 (225)
T 3oyo_A 127 GKEVYLFKG--------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG---------- 188 (225)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET----------
T ss_pred CCcEEEEeC--------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC----------
Confidence 689999976 3589999777665431 1 1111 00111222333 3789999976
Q ss_pred ceEEEEECC
Q 016413 197 SRTFVLDSE 205 (390)
Q Consensus 197 ~~v~~yd~~ 205 (390)
+..|+||..
T Consensus 189 ~~ywr~d~~ 197 (225)
T 3oyo_A 189 QNYVRIDFT 197 (225)
T ss_dssp TEEEEEECC
T ss_pred CEEEEEeCC
Confidence 458899987
No 277
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=29.29 E-value=3.1e+02 Score=24.53 Aligned_cols=74 Identities=11% Similarity=-0.015 Sum_probs=41.4
Q ss_pred EEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCC-CCCCcceEEEEeCCEEEEEecee-CCC--------CCCCCceE
Q 016413 130 LFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPK-DMAHSHLGVVSDGRYIYIVSGQY-GPQ--------CRGPTSRT 199 (390)
Q Consensus 130 ~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~-~~~r~~~~~~~~~~~iyv~GG~~-~~~--------~~~~~~~v 199 (390)
+|||+--.... ..-.++.+|+.++....+..... +..+.+-.++.-++.+|+-+-.. ... ...+...+
T Consensus 128 ~L~Vvnh~~~~--s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~v 205 (355)
T 3sre_A 128 YLLVVNHPGSS--STVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFV 205 (355)
T ss_dssp EEEEEECSTTC--CEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEE
T ss_pred EEEEEECCCCC--CeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEE
Confidence 58887543211 12346667777776665543322 33455666666789999865311 100 00235779
Q ss_pred EEEECC
Q 016413 200 FVLDSE 205 (390)
Q Consensus 200 ~~yd~~ 205 (390)
++||+.
T Consensus 206 yr~d~~ 211 (355)
T 3sre_A 206 TYYSPN 211 (355)
T ss_dssp EEECTT
T ss_pred EEEECC
Confidence 999984
No 278
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=28.79 E-value=2.7e+02 Score=23.61 Aligned_cols=55 Identities=7% Similarity=-0.049 Sum_probs=30.1
Q ss_pred CeEEEEeCCCCceeecCCCCCCCCCcceEEEEe-C-CEEEEEeceeCCCCCCCCceEEEEECCCC
Q 016413 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-G-RYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (390)
Q Consensus 145 ~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (390)
..+++||+.+.+.+.+. .. .. ..+++.. + ..||+....... .....+++||...+
T Consensus 169 ~~v~~~d~~~g~~~~~~--~~--~~-p~gl~~spdg~~lyv~~~~~~~---~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA--DL--DH-PNGLAFSPDEQTLYVSQTPEQG---HGSVEITAFAWRDG 225 (305)
T ss_dssp EEEEEECSSSCCCEEEE--EE--SS-EEEEEECTTSSEEEEEECCC------CCCEEEEEEEETT
T ss_pred CeEEEEcCCCCcEEEEe--cC--CC-CcceEEcCCCCEEEEEecCCcC---CCCCEEEEEEecCC
Confidence 56999999888877654 21 11 1233332 3 458877532110 01256888877544
No 279
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=28.71 E-value=2.3e+02 Score=25.98 Aligned_cols=89 Identities=10% Similarity=0.156 Sum_probs=48.1
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-e-CCEEEEEeceeCCCCCCCCceEEEEECC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-D-GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (390)
++.||+.--. ..+.++|+.+++...+.... .+ -..+++ . ++.||+.....+. ....+..++..
T Consensus 149 ~g~Lyv~d~~-------~~I~~id~~~~~v~~~~~~~---~~-P~~ia~d~~G~~lyvad~~~~~----~~~~v~~~~~~ 213 (430)
T 3tc9_A 149 HNHLYLVGEQ-------HPTRLIDFEKEYVSTVYSGL---SK-VRTICWTHEADSMIITNDQNNN----DRPNNYILTRE 213 (430)
T ss_dssp EEEEEEEEBT-------EEEEEEETTTTEEEEEECCC---SC-EEEEEECTTSSEEEEEECCSCT----TSEEEEEEEGG
T ss_pred CCeEEEEeCC-------CcEEEEECCCCEEEEEecCC---CC-cceEEEeCCCCEEEEEeCCCCc----ccceEEEEeCC
Confidence 4689987421 56999999998887764411 12 223333 2 3459998643221 12346666654
Q ss_pred CCCeE---eCCCCCCCCCCceEEEE--CCEEEEEc
Q 016413 206 TRKWD---SIPPLPSPRYSPATQLW--RGRLHVMG 235 (390)
Q Consensus 206 ~~~W~---~~~~~p~~r~~~~~~~~--~~~iyv~G 235 (390)
. .|. .++.+. .-+.+++. ++.||+.-
T Consensus 214 g-~~~~~~~l~~~~---~p~giavdp~~g~lyv~d 244 (430)
T 3tc9_A 214 S-GFKVITELTKGQ---NCNGAETHPINGELYFNS 244 (430)
T ss_dssp G-TSCSEEEEEECS---SCCCEEECTTTCCEEEEE
T ss_pred C-ceeeeeeeccCC---CceEEEEeCCCCEEEEEE
Confidence 3 232 332222 22344443 57888874
No 280
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=27.04 E-value=2.7e+02 Score=25.08 Aligned_cols=63 Identities=16% Similarity=0.145 Sum_probs=39.0
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeec---------CCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCce
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDR---------FDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSR 198 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~---------~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 198 (390)
++++|+|=| +..|+||..+++-..- +.+|. ....+....++++|.|=| +.
T Consensus 284 ~~~~yfFkG--------~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~---~iDaA~~~~~g~~YfFkg----------~~ 342 (365)
T 3ba0_A 284 FYRTYFFVD--------NQYWRYDERRQMMDPGYPKLITKNFQGIGP---KIDAVFYSKNKYYYFFQG----------SN 342 (365)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEECSSCCCCHHHHSTTCCS---SCSEEEEETTTEEEEEET----------TE
T ss_pred CCEEEEEEC--------CEEEEEeCCcceecCCCCcchhhcCCCCCC---ccceeeEecCCcEEEEeC----------CE
Confidence 479999966 3589999876653321 11221 233333333889999965 45
Q ss_pred EEEEECCCCCeEe
Q 016413 199 TFVLDSETRKWDS 211 (390)
Q Consensus 199 v~~yd~~~~~W~~ 211 (390)
.|+||..+.+-..
T Consensus 343 ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 343 QFEYDFLLQRITK 355 (365)
T ss_dssp EEEEETTTTEEEE
T ss_pred EEEEECCccEEec
Confidence 8899988765433
No 281
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=26.86 E-value=4.6e+02 Score=25.75 Aligned_cols=206 Identities=13% Similarity=0.122 Sum_probs=92.4
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCCC------CCCCCceEE
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQ------CRGPTSRTF 200 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~------~~~~~~~v~ 200 (390)
+++.++++....... ...++++|+.+.+..... .+. .+. ..++. -+..||. +..+... .......++
T Consensus 173 DG~~la~~~~~~G~e-~~~i~v~dl~tg~~~~~~-~~~--~~~-~~~~wspD~~l~~-~~~~~~~~~~~~~~~~~~~~v~ 246 (741)
T 1yr2_A 173 DGRLLAYSVQDGGSD-WRTVKFVGVADGKPLADE-LKW--VKF-SGLAWLGNDALLY-SRFAEPKEGQAFQALNYNQTVW 246 (741)
T ss_dssp TSSEEEEEEEETTCS-EEEEEEEETTTCCEEEEE-EEE--EES-CCCEESTTSEEEE-EECCCC--------CCCCCEEE
T ss_pred CCCEEEEEEcCCCCc-eEEEEEEECCCCCCCCcc-CCC--cee-ccEEEECCCEEEE-EEecCcccccccccCCCCCEEE
Confidence 555555544322111 246999999998875431 111 111 12222 2333443 3332210 001245688
Q ss_pred EEECCCCCe--EeCCCCCC-CCCCceEE-EECCE-EEEEccCCCCCCCCCcceEEeeeeccccccC--C-eEEccCCCCC
Q 016413 201 VLDSETRKW--DSIPPLPS-PRYSPATQ-LWRGR-LHVMGGSKENRHTPGLEHWSIAVKDGKALEK--A-WRTEIPIPRG 272 (390)
Q Consensus 201 ~yd~~~~~W--~~~~~~p~-~r~~~~~~-~~~~~-iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~--~-W~~~~~~p~~ 272 (390)
+++..+..- ..+...+. +....... .-+++ |++.... .......+..+++ .+. + |+.+..-...
T Consensus 247 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~-~~~~~~~l~~~d~-------~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 247 LHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSE-GTDPVNTVHVARV-------TNGKIGPVTALIPDLKA 318 (741)
T ss_dssp EEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC-TTCSCCEEEEEEE-------ETTEECCCEEEECSSSS
T ss_pred EEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEc-cCCCcceEEEEEC-------CCCCCcccEEecCCCCc
Confidence 888876542 12222221 11222222 22454 4444332 2112334444443 333 5 7776543222
Q ss_pred CCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCcEEeeC-CC--CCeEECCCCCCCCCcceeEEEEECCE
Q 016413 273 GPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DE--MKWKVLPPMPKPNSHIECAWVIVNNS 349 (390)
Q Consensus 273 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~--~~W~~~~~~~~~~~~~~~~~~~~~~~ 349 (390)
.. ..+...++.||+..-.+.. ...++.+| .+ ..|+.+-+-. .... ..+...+++
T Consensus 319 ~~-~~~~~dg~~l~~~s~~~~~-------------------~~~l~~~d~~~~~~~~~~l~~~~--~~~l-~~~~~~~~~ 375 (741)
T 1yr2_A 319 QW-DFVDGVGDQLWFVSGDGAP-------------------LKKIVRVDLSGSTPRFDTVVPES--KDNL-ESVGIAGNR 375 (741)
T ss_dssp CE-EEEEEETTEEEEEECTTCT-------------------TCEEEEEECSSSSCEEEEEECCC--SSEE-EEEEEEBTE
T ss_pred eE-EEEeccCCEEEEEECCCCC-------------------CCEEEEEeCCCCccccEEEecCC--CCeE-EEEEEECCE
Confidence 22 1223456777777543321 13488888 55 4687764221 1111 123445778
Q ss_pred EEEEcCCCCCCCcceeeEEeeeEEEeecCcc
Q 016413 350 IIITGGTTEKHPMTKRMILVGEVFQFHLDSL 380 (390)
Q Consensus 350 l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 380 (390)
+++....++.. .++.+|+...
T Consensus 376 lv~~~~~dg~~----------~l~~~~~~g~ 396 (741)
T 1yr2_A 376 LFASYIHDAKS----------QVLAFDLDGK 396 (741)
T ss_dssp EEEEEEETTEE----------EEEEEETTSC
T ss_pred EEEEEEECCEE----------EEEEEeCCCC
Confidence 77776544332 4666665443
No 282
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=26.15 E-value=2.7e+02 Score=22.86 Aligned_cols=92 Identities=17% Similarity=0.253 Sum_probs=47.8
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCc--e-eecCC--CCCCCCCcceEEEE-eCCEEEEEeceeCCCCCCCCceEEE
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK--W-VDRFD--MPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFV 201 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W-~~~~~--l~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~ 201 (390)
++++|+|=| +..|+||..+-. + ..+.. +|....+-..+... .++++|+|-| +..|+
T Consensus 87 ~~k~yfFkG--------~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG----------~~ywr 148 (218)
T 1gen_A 87 EEKAVFFAG--------NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG----------DKFWR 148 (218)
T ss_dssp TTEEEEEET--------TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET----------TEEEE
T ss_pred CCEEEEEeC--------CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC----------CEEEE
Confidence 589999966 358888842100 0 01212 22111122322221 3689999976 45889
Q ss_pred EECCCCCeEe-----CCC--CCCCCCCceEEEEC--CEEEEEccC
Q 016413 202 LDSETRKWDS-----IPP--LPSPRYSPATQLWR--GRLHVMGGS 237 (390)
Q Consensus 202 yd~~~~~W~~-----~~~--~p~~r~~~~~~~~~--~~iyv~GG~ 237 (390)
||..+++=.. +.. +..+..-.++...+ +.+|.|=|.
T Consensus 149 ~d~~~~~v~~gyPr~i~~~w~g~p~~idaAf~~~~~g~~YfFkg~ 193 (218)
T 1gen_A 149 YNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGA 193 (218)
T ss_dssp EETTTTEECSSCCEEHHHHSSSCCSSCSEEEECTTTCEEEEEETT
T ss_pred EECccccccCCCCcchhhccCCCCCCCCEEEEEcCCCcEEEEECC
Confidence 9987653211 110 11222333455554 899999664
No 283
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=24.10 E-value=42 Score=30.22 Aligned_cols=46 Identities=9% Similarity=0.141 Sum_probs=20.9
Q ss_pred EEeeC-CCC--CeEECCCCCCCCCcceeEEEEECCEEEEEcCCCCCCCcceeeEEeeeEEEeecCcc
Q 016413 317 VYMLD-DEM--KWKVLPPMPKPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSL 380 (390)
Q Consensus 317 v~~yd-~~~--~W~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 380 (390)
++.+| .+. .|+.-. .+.. .+.+..++++|+.++.++ .++.+|.++.
T Consensus 21 v~a~d~~tG~~~W~~~~---~~~~---s~p~~~~g~~~v~~s~dg------------~l~a~d~~tG 69 (369)
T 2hz6_A 21 LHAVSKRTGSIKWTLKE---DPVL---QVPTHVEEPAFLPDPNDG------------SLYTLGSKNN 69 (369)
T ss_dssp EEEEETTTCCEEEEEEC---CCSC---CCC-----CCEEECTTTC------------CEEEC-----
T ss_pred EEEEECCCCCEEEEecC---CCce---ecceEcCCCEEEEeCCCC------------EEEEEECCCC
Confidence 88998 543 787643 1111 112445677888765432 3788887553
No 284
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=24.03 E-value=3.5e+02 Score=23.29 Aligned_cols=133 Identities=15% Similarity=0.077 Sum_probs=70.1
Q ss_pred ECCEEEEEecCCCCCCCCCeEEEEeCCCCceeecC--CCCCCCCCcceEEEE--eCCEEEEEeceeCCCCCCCCceEEEE
Q 016413 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF--DMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVL 202 (390)
Q Consensus 127 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~--~l~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~y 202 (390)
.++.||+.-.. ...++++|+....-..+. .+..| .++++ .++.||+..-. ....++++
T Consensus 87 ~~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~~~~~P-----~~iavdp~~g~ly~~d~~-------~~~~I~~~ 148 (316)
T 1ijq_A 87 IHSNIYWTDSV------LGTVSVADTKGVKRKTLFRENGSKP-----RAIVVDPVHGFMYWTDWG-------TPAKIKKG 148 (316)
T ss_dssp TTTEEEEEETT------TTEEEEEETTSSSEEEEEECTTCCE-----EEEEEETTTTEEEEEECS-------SSCEEEEE
T ss_pred cCCeEEEEECC------CCEEEEEeCCCCceEEEEECCCCCc-----ceEEeCCCCCEEEEEccC-------CCCeEEEE
Confidence 36899997332 246899998765433332 22221 23444 47899997521 13579999
Q ss_pred ECCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceEEeeeeccccccCCeEEccCC-CCCCCceeEE
Q 016413 203 DSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPI-PRGGPHRACF 279 (390)
Q Consensus 203 d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~-p~~~~~~~~~ 279 (390)
++....=+.+..... ..-..+++- +++||+.-.. ...+.++++ ....-+.+... .......+++
T Consensus 149 ~~dG~~~~~~~~~~~-~~P~gla~d~~~~~lY~~D~~-----~~~I~~~d~-------dg~~~~~~~~~~~~~~~P~gia 215 (316)
T 1ijq_A 149 GLNGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSK-----LHSISSIDV-------NGGNRKTILEDEKRLAHPFSLA 215 (316)
T ss_dssp ETTSCCEEEEECSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEET-------TSCSCEEEEECTTTTSSEEEEE
T ss_pred cCCCCCeEEEEECCC-CCceEEEEeccCCEEEEEECC-----CCeEEEEec-------CCCceEEEeecCCccCCcEEEE
Confidence 987554333321111 112234443 6799998532 234444442 22212222221 1122334677
Q ss_pred EECCEEEEEcC
Q 016413 280 VFNDRLFVVGG 290 (390)
Q Consensus 280 ~~~~~iyv~GG 290 (390)
+.++.||+.-.
T Consensus 216 v~~~~ly~~d~ 226 (316)
T 1ijq_A 216 VFEDKVFWTDI 226 (316)
T ss_dssp EETTEEEEEET
T ss_pred EECCEEEEEEC
Confidence 78999999864
No 285
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=23.42 E-value=45 Score=28.00 Aligned_cols=62 Identities=11% Similarity=0.125 Sum_probs=35.1
Q ss_pred ECCEEEEEecCCCCCCCCCeEEEEe--CCC-------------CceeecCCCCCCCCCcceEEEE-eCCEEEEEeceeCC
Q 016413 127 IKNLFYVFAGYGSLDYVHSHVDVYN--FTD-------------NKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGP 190 (390)
Q Consensus 127 ~~~~lyv~GG~~~~~~~~~~v~~yd--~~~-------------~~W~~~~~l~~~~~r~~~~~~~-~~~~iyv~GG~~~~ 190 (390)
.++++|+|-| +.+|+|+ +.+ ..|.-++.-..| ..-..+... .++++|+|-|
T Consensus 71 ~~g~~~fFKg--------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p-~~IDAA~~~~~~~k~yfFkG---- 137 (227)
T 3lp9_A 71 ENNEAFIFYE--------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFE-SGIDAAYRSTRGKEVYLFKG---- 137 (227)
T ss_dssp STTEEEEEET--------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTT-TCCSEEEECSSTTEEEEEET----
T ss_pred CCCEEEEEeC--------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCC-CcccEEEEECCCCEEEEEEC----
Confidence 5789999976 2477777 321 123333211001 122323222 3689999976
Q ss_pred CCCCCCceEEEEECCCC
Q 016413 191 QCRGPTSRTFVLDSETR 207 (390)
Q Consensus 191 ~~~~~~~~v~~yd~~~~ 207 (390)
+..|+||..++
T Consensus 138 ------~~yw~~d~~~~ 148 (227)
T 3lp9_A 138 ------DQYARIDYGSN 148 (227)
T ss_dssp ------TEEEEEETTTT
T ss_pred ------CEEEEEeCCCc
Confidence 56899998754
No 286
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=23.33 E-value=4.3e+02 Score=24.14 Aligned_cols=47 Identities=13% Similarity=0.047 Sum_probs=28.5
Q ss_pred CEEEEEeceeCCCCCCCCceEEEEECCCCCeEeCCCCCCCCCCceEE-EECCEEEEEcc
Q 016413 179 RYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQ-LWRGRLHVMGG 236 (390)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG 236 (390)
+.||+.-. ...+.++|+++.+.+.+.. ... .-..++ .-++.|||..-
T Consensus 153 g~Lyv~D~---------~~~I~~id~~~g~v~~~~~-~~~-~P~giavd~dG~lyVad~ 200 (433)
T 4hw6_A 153 DDLYWVGQ---------RDAFRHVDFVNQYVDIKTT-NIG-QCADVNFTLNGDMVVVDD 200 (433)
T ss_dssp CEEEEECB---------TSCEEEEETTTTEEEEECC-CCS-CEEEEEECTTCCEEEEEC
T ss_pred CEEEEEeC---------CCCEEEEECCCCEEEEeec-CCC-CccEEEECCCCCEEEEcC
Confidence 89999842 1569999998887776653 111 112222 22456888853
No 287
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=22.21 E-value=3.3e+02 Score=22.42 Aligned_cols=57 Identities=18% Similarity=0.295 Sum_probs=32.2
Q ss_pred ECCEEEEEecCCCCCCCCCeEEEEeCCCCce--eec----CCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEE
Q 016413 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKW--VDR----FDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTF 200 (390)
Q Consensus 127 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W--~~~----~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~ 200 (390)
.++++|+|=|. ..|+++.....+ ..+ +.||. .-.++. ..++++|+|=| +.+|
T Consensus 27 ~~g~~yfFkg~--------~~Wr~~~~~~~~~p~~Is~~wpgLP~---~IDAA~-~~~~~~yfFkG----------~~yw 84 (219)
T 1hxn_A 27 NHGATYVFSGS--------HYWRLDTNRDGWHSWPIAHQWPQGPS---TVDAAF-SWEDKLYLIQD----------TKVY 84 (219)
T ss_dssp TTSCEEEEETT--------EEEESSSSSCTTCCEEGGGTCTTSCS---SCSEEE-EETTEEEEEET----------TEEE
T ss_pred CCCcEEEEeCC--------EEEEEcCCCCCCCceEhhhhccCCCC---CccEEE-EECCcEEEecC----------CEEE
Confidence 47889999663 356665433221 111 12332 223333 34899999965 4588
Q ss_pred EEECC
Q 016413 201 VLDSE 205 (390)
Q Consensus 201 ~yd~~ 205 (390)
+|+..
T Consensus 85 ~~~~~ 89 (219)
T 1hxn_A 85 VFLTK 89 (219)
T ss_dssp EEECS
T ss_pred EEeCC
Confidence 89865
No 288
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=21.31 E-value=3.4e+02 Score=22.26 Aligned_cols=91 Identities=12% Similarity=0.022 Sum_probs=51.1
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceeecCCCCCCCCCcceEEEEe--CCEEEEEeceeCCCCCCCCceEEEEECC
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~l~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (390)
+++||+.-... ....++++++....-+.+..... ..-.++++. ++.||+.-. ..+.+.++|+.
T Consensus 133 ~g~lyv~~~~~----~~~~I~~~~~dg~~~~~~~~~~~---~~P~gia~d~~~~~lyv~d~--------~~~~I~~~~~~ 197 (267)
T 1npe_A 133 RGNLYWTDWNR----DNPKIETSHMDGTNRRILAQDNL---GLPNGLTFDAFSSQLCWVDA--------GTHRAECLNPA 197 (267)
T ss_dssp TTEEEEEECCS----SSCEEEEEETTSCCCEEEECTTC---SCEEEEEEETTTTEEEEEET--------TTTEEEEEETT
T ss_pred CCEEEEEECCC----CCcEEEEEecCCCCcEEEEECCC---CCCcEEEEcCCCCEEEEEEC--------CCCEEEEEecC
Confidence 57899975321 12468889887654333322111 222344443 578999852 24679999987
Q ss_pred CCCeEeC-CCCCCCCCCceEEEECCEEEEEcc
Q 016413 206 TRKWDSI-PPLPSPRYSPATQLWRGRLHVMGG 236 (390)
Q Consensus 206 ~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG 236 (390)
...=+.+ ..+..| ..++..++.||+...
T Consensus 198 g~~~~~~~~~~~~P---~gi~~d~~~lyva~~ 226 (267)
T 1npe_A 198 QPGRRKVLEGLQYP---FAVTSYGKNLYYTDW 226 (267)
T ss_dssp EEEEEEEEECCCSE---EEEEEETTEEEEEET
T ss_pred CCceEEEecCCCCc---eEEEEeCCEEEEEEC
Confidence 5432222 122222 355667899999753
No 289
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=20.95 E-value=3.3e+02 Score=21.89 Aligned_cols=62 Identities=11% Similarity=0.139 Sum_probs=36.2
Q ss_pred CCEEEEEecCCCCCCCCCeEEEEeCCCCceee-----cCCC-CCCCCCcceEEEEeCC-EEEEEeceeCCCCCCCCceEE
Q 016413 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-----RFDM-PKDMAHSHLGVVSDGR-YIYIVSGQYGPQCRGPTSRTF 200 (390)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~-----~~~l-~~~~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~v~ 200 (390)
++++|.|-| +..|+||..+++-.. +... ..| ..-..+....++ ++|.|=| +..+
T Consensus 109 ~g~~yfFkG--------~~yw~yd~~~~~v~~gyPk~i~~~~gip-~~idaAf~~~~~~~~YfFkg----------~~y~ 169 (196)
T 3c7x_A 109 NGKTYFFRG--------NKYYRFNEELRAVDSEYPKNIKVWEGIP-ESPRGSFMGSDEVFTYFYKG----------NKYW 169 (196)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEECTTCSEEGGGSBTCC-SSCSEEEECTTSSEEEEEET----------TEEE
T ss_pred CCEEEEEEC--------CEEEEEeCCcccccCCCCccHHHCCCcC-CCcceeEEecCCCEEEEEEC----------CEEE
Confidence 589999966 358999987764321 1111 111 122222222244 9999965 5578
Q ss_pred EEECCCCC
Q 016413 201 VLDSETRK 208 (390)
Q Consensus 201 ~yd~~~~~ 208 (390)
+||..+.+
T Consensus 170 r~d~~~~~ 177 (196)
T 3c7x_A 170 KFNNQKLK 177 (196)
T ss_dssp EEETTTTE
T ss_pred EEECCcce
Confidence 99987653
No 290
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=20.69 E-value=5.9e+02 Score=24.77 Aligned_cols=82 Identities=13% Similarity=0.176 Sum_probs=49.3
Q ss_pred CeEEEEeCCCC--ceeecCCCCCCCCCcceEEEEeCCEEEEEeceeCCCCCCCCceEEEEECCCC---CeEeCCCCCCCC
Q 016413 145 SHVDVYNFTDN--KWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR---KWDSIPPLPSPR 219 (390)
Q Consensus 145 ~~v~~yd~~~~--~W~~~~~l~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~r 219 (390)
++++.+|..+. .|..+..-.. .....+...++.||+....++ ....+...|+.+. .|+.+.+-....
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~---~~~~~~~~~g~~l~~~t~~~~-----~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 330 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLD---ADVSLVDNKGSTLYLLTNRDA-----PNRRLVTVDAANPGPAHWRDLIPERQQV 330 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSS---SCEEEEEEETTEEEEEECTTC-----TTCEEEEEETTSCCGGGCEEEECCCSSC
T ss_pred cEEEEEECCCCCCceEEEeCCCC---ceEEEEeccCCEEEEEECCCC-----CCCEEEEEeCCCCCccccEEEecCCCCE
Confidence 57999998765 6776643221 112224456889999865322 2567899998763 488765433222
Q ss_pred CCceEEEECCEEEEEcc
Q 016413 220 YSPATQLWRGRLHVMGG 236 (390)
Q Consensus 220 ~~~~~~~~~~~iyv~GG 236 (390)
. .....++.|++..-
T Consensus 331 -~-~~s~~g~~lv~~~~ 345 (693)
T 3iuj_A 331 -L-TVHSGSGYLFAEYM 345 (693)
T ss_dssp -E-EEEEETTEEEEEEE
T ss_pred -E-EEEEECCEEEEEEE
Confidence 2 45566777766543
Done!