BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016414
(390 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359488064|ref|XP_003633697.1| PREDICTED: uncharacterized protein LOC100263155 [Vitis vinifera]
Length = 801
Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust.
Identities = 289/390 (74%), Positives = 313/390 (80%), Gaps = 44/390 (11%)
Query: 1 MGAKRKKSEGEELLNEGEKENDKNNENISKKMKKEILPSMIKNKEKRSAVHAKLKHQKKV 60
MGAKRKK E + ++ KK+ILPSMIKNK+KRSAVHAKLKHQKK+
Sbjct: 456 MGAKRKKRE------------EVGGDDEVAGGKKQILPSMIKNKDKRSAVHAKLKHQKKI 503
Query: 61 EKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFS 120
EKRKK KAR+AAEKRALELGEEPP + PRTIENTRE DETVC+PDD+ELFAGNDADEFS
Sbjct: 504 EKRKKAKAREAAEKRALELGEEPPVKAIPRTIENTREFDETVCKPDDEELFAGNDADEFS 563
Query: 121 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 180
SIL + PKILITTCRFNS RGPAFISELLSVIPN+HYYKRGTYDLKKI+EYAK KDFT
Sbjct: 564 SILNRKSDPKILITTCRFNSTRGPAFISELLSVIPNAHYYKRGTYDLKKIVEYAKIKDFT 623
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 240
S+IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVL KD+KNHGNPT HIPELVLNNF TR
Sbjct: 624 SLIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLHKDVKNHGNPTSHIPELVLNNFTTR 683
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLT 300
LGHR+GR+IQSLFPQ+P FRGRRVVTFHNQRDFIFFRHH
Sbjct: 684 LGHRIGRMIQSLFPQAPNFRGRRVVTFHNQRDFIFFRHH--------------------- 722
Query: 301 SIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 360
RYIFE+KESK D G K KDAK EK+SQ KV+ RLQECGPRFTLKL++
Sbjct: 723 -----------RYIFESKESKQGDTKGNKDKDAKGEKSSQGKVVARLQECGPRFTLKLIN 771
Query: 361 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 772 LQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 801
>gi|302143564|emb|CBI22317.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust.
Identities = 291/393 (74%), Positives = 315/393 (80%), Gaps = 50/393 (12%)
Query: 1 MGAKRKKSE---GEELLNEGEKENDKNNENISKKMKKEILPSMIKNKEKRSAVHAKLKHQ 57
MGAKRKK E G++ + G KK+ILPSMIKNK+KRSAVHAKLKHQ
Sbjct: 1 MGAKRKKREEVGGDDEVAGG---------------KKQILPSMIKNKDKRSAVHAKLKHQ 45
Query: 58 KKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDAD 117
KK+EKRKK KAR+AAEKRALELGEEPP + PRTIENTRE DETVC+PDD+ELFAGNDAD
Sbjct: 46 KKIEKRKKAKAREAAEKRALELGEEPPVKAIPRTIENTREFDETVCKPDDEELFAGNDAD 105
Query: 118 EFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKK 177
EFSSIL + PKILITTCRFNS RGPAFISELLSVIPN+HYYKRGTYDLKKI+EYAK K
Sbjct: 106 EFSSILNRKSDPKILITTCRFNSTRGPAFISELLSVIPNAHYYKRGTYDLKKIVEYAKIK 165
Query: 178 DFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNF 237
DFTS+IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVL KD+KNHGNPT HIPELVLNNF
Sbjct: 166 DFTSLIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLHKDVKNHGNPTSHIPELVLNNF 225
Query: 238 ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCS 297
TRLGHR+GR+IQSLFPQ+P FRGRRVVTFHNQRDFIFFRHH
Sbjct: 226 TTRLGHRIGRMIQSLFPQAPNFRGRRVVTFHNQRDFIFFRHH------------------ 267
Query: 298 YLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 357
RYIFE+KESK D G K KDAK EK+SQ KV+ RLQECGPRFTLK
Sbjct: 268 --------------RYIFESKESKQGDTKGNKDKDAKGEKSSQGKVVARLQECGPRFTLK 313
Query: 358 LVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L++LQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 314 LINLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 346
>gi|359480784|ref|XP_002268541.2| PREDICTED: ribosome production factor 1-like [Vitis vinifera]
Length = 346
Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust.
Identities = 291/390 (74%), Positives = 316/390 (81%), Gaps = 44/390 (11%)
Query: 1 MGAKRKKSEGEELLNEGEKENDKNNENISKKMKKEILPSMIKNKEKRSAVHAKLKHQKKV 60
MGAKRKK+E + ++ KK+ILPSMIKNKEKRSAVHAKLKHQKK+
Sbjct: 1 MGAKRKKTE------------EVGGDDEVGGGKKQILPSMIKNKEKRSAVHAKLKHQKKI 48
Query: 61 EKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFS 120
EKRKK KAR+AAEKRALELGEEPPA+ P TIENTRE DETVC+PDD+ELFAGNDADEFS
Sbjct: 49 EKRKKAKAREAAEKRALELGEEPPAKKIPHTIENTREFDETVCKPDDEELFAGNDADEFS 108
Query: 121 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 180
SIL + PKILITTCRFNS RGPAFISELLSVIPN+HYYKRGTYDLKKI+EYAKKKDFT
Sbjct: 109 SILNRKSDPKILITTCRFNSTRGPAFISELLSVIPNAHYYKRGTYDLKKIVEYAKKKDFT 168
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 240
S+IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD+KNHGNPT HIPELVLNNF TR
Sbjct: 169 SLIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDVKNHGNPTSHIPELVLNNFTTR 228
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLT 300
LGHR+GR+IQSLFPQ+P F GRRVVTFHNQRDFIFFRHH
Sbjct: 229 LGHRIGRMIQSLFPQAPNFGGRRVVTFHNQRDFIFFRHH--------------------- 267
Query: 301 SIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 360
RYIFE+KESK D+ G K KDAK EK+S+ KV+ RLQECGPRFTLKL+S
Sbjct: 268 -----------RYIFESKESKQGDSKGNKDKDAKGEKSSRGKVVARLQECGPRFTLKLIS 316
Query: 361 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 317 LQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 346
>gi|296082657|emb|CBI21662.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust.
Identities = 277/351 (78%), Positives = 297/351 (84%), Gaps = 32/351 (9%)
Query: 40 MIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPD 99
MIKNKEKRSAVHAKLKHQKK+EKRKK KAR+AAEKRALELGEEPPA+ P TIENTRE D
Sbjct: 1 MIKNKEKRSAVHAKLKHQKKIEKRKKAKAREAAEKRALELGEEPPAKKIPHTIENTREFD 60
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
ETVC+PDD+ELFAGNDADEFSSIL + PKILITTCRFNS RGPAFISELLSVIPN+HY
Sbjct: 61 ETVCKPDDEELFAGNDADEFSSILNRKSDPKILITTCRFNSTRGPAFISELLSVIPNAHY 120
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
YKRGTYDLKKI+EYAKKKDFTS+IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD+
Sbjct: 121 YKRGTYDLKKIVEYAKKKDFTSLIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDV 180
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
KNHGNPT HIPELVLNNF TRLGHR+GR+IQSLFPQ+P F GRRVVTFHNQRDFIFFRHH
Sbjct: 181 KNHGNPTSHIPELVLNNFTTRLGHRIGRMIQSLFPQAPNFGGRRVVTFHNQRDFIFFRHH 240
Query: 280 RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS 339
RYIFE+KESK D+ G K KDAK EK+S
Sbjct: 241 --------------------------------RYIFESKESKQGDSKGNKDKDAKGEKSS 268
Query: 340 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ KV+ RLQECGPRFTLKL+SLQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 269 RGKVVARLQECGPRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 319
>gi|358346575|ref|XP_003637342.1| Ribosome production factor [Medicago truncatula]
gi|355503277|gb|AES84480.1| Ribosome production factor [Medicago truncatula]
Length = 356
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 270/392 (68%), Positives = 303/392 (77%), Gaps = 40/392 (10%)
Query: 1 MGAKRKKSEGEELLNEGEKENDKNNENISKKMKKEILPSMIKNKEKRSAVHAKLKHQKKV 60
+G KRK++ N+ + E++ + + K+ PSMIKNKEKRS +HAKLKHQKK+
Sbjct: 3 IGGKRKRN------NDSDGEDNSSKRETRTETKEPFRPSMIKNKEKRSEIHAKLKHQKKL 56
Query: 61 EKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFS 120
EKR K ARDAA KRA+ELGEEPP + P+TIENTRE DETVC+PDD+ELFAGNDADEFS
Sbjct: 57 EKRAKSNARDAAVKRAIELGEEPPEKKVPKTIENTREVDETVCKPDDEELFAGNDADEFS 116
Query: 121 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKK--IIEYAKKKD 178
SILK+ +PKILITTCRFNS RGPA ISELL VIPN+HY+KRGTYDLKK I+EYA KKD
Sbjct: 117 SILKRQQSPKILITTCRFNSTRGPALISELLQVIPNAHYFKRGTYDLKKVMIVEYANKKD 176
Query: 179 FTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFA 238
FTS++VVHTNRREP+ALLIIGLP+GPTAHFKL+ LVLRKDIKNHG PT H PELVLNNF
Sbjct: 177 FTSLVVVHTNRREPNALLIIGLPEGPTAHFKLTNLVLRKDIKNHGVPTSHQPELVLNNFT 236
Query: 239 TRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSY 298
TRLGHRVGR+IQSLFPQ PEF+GRRVVTFHNQRDFIFFRHH
Sbjct: 237 TRLGHRVGRMIQSLFPQDPEFKGRRVVTFHNQRDFIFFRHH------------------- 277
Query: 299 LTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 358
RYIFETKE K ++ GK +D KSEK K I RLQECGPRFTLKL
Sbjct: 278 -------------RYIFETKEIKKIESKGKNDEDGKSEKVPDHKTIARLQECGPRFTLKL 324
Query: 359 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
SLQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 325 KSLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 356
>gi|224068234|ref|XP_002302686.1| predicted protein [Populus trichocarpa]
gi|222844412|gb|EEE81959.1| predicted protein [Populus trichocarpa]
Length = 361
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 295/393 (75%), Positives = 315/393 (80%), Gaps = 35/393 (8%)
Query: 1 MGAKRKKSEGEELLNEG---EKENDKNNENISKKMKKEILPSMIKNKEKRSAVHAKLKHQ 57
MG KR+ SE E + G E + + + + K +EILPSMIKNKEKRSAVHAKLKH+
Sbjct: 1 MGGKRRTSESEAMEEYGSDVELDRKEKKKKMEKGKTREILPSMIKNKEKRSAVHAKLKHE 60
Query: 58 KKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDAD 117
KKVEKRKKLKARDA EKRALELGEEPP R PRTIENTRE DETVC+PDD+ELFAGNDAD
Sbjct: 61 KKVEKRKKLKARDAEEKRALELGEEPPPRKIPRTIENTRENDETVCKPDDEELFAGNDAD 120
Query: 118 EFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKK 177
EFSSILK+ PKILITT RFNS RGPAFISELL VIPN+HYYKRGTYDLKKI+EYAKK+
Sbjct: 121 EFSSILKRERTPKILITTSRFNSTRGPAFISELLQVIPNAHYYKRGTYDLKKIVEYAKKQ 180
Query: 178 DFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNF 237
DFTS+IVVHTNRREPDALLIIGLPDGPTAHFKLS+LVLRKDIKNHGNPT H PELVL NF
Sbjct: 181 DFTSLIVVHTNRREPDALLIIGLPDGPTAHFKLSRLVLRKDIKNHGNPTSHEPELVLTNF 240
Query: 238 ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCS 297
TRLGHR GR+IQSLFPQ P FRGRRVVTFHNQRD+IFFRHH
Sbjct: 241 TTRLGHRAGRIIQSLFPQEPNFRGRRVVTFHNQRDYIFFRHH------------------ 282
Query: 298 YLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 357
RYIFETKESK SD+ GKK KD K EK SQQKVI RLQECGPRFTLK
Sbjct: 283 --------------RYIFETKESKQSDSKGKKGKDGKGEKISQQKVIARLQECGPRFTLK 328
Query: 358 LVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L SLQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 329 LRSLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 361
>gi|363807176|ref|NP_001242604.1| uncharacterized protein LOC100785331 [Glycine max]
gi|255644450|gb|ACU22729.1| unknown [Glycine max]
Length = 354
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 274/353 (77%), Positives = 293/353 (83%), Gaps = 32/353 (9%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTRE 97
PSMIKNKEKRS +HAKLKHQKK+EKR K KARDAA K+ALELGEEPP + PRTIENTRE
Sbjct: 34 PSMIKNKEKRSELHAKLKHQKKLEKRAKAKARDAALKKALELGEEPPEKKVPRTIENTRE 93
Query: 98 PDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNS 157
DETVC+PDD+ELFAGNDADEF IL Q PKILITTCRF+S RGPAFISELLSVIPN+
Sbjct: 94 LDETVCKPDDEELFAGNDADEFGPILNQQQTPKILITTCRFHSTRGPAFISELLSVIPNA 153
Query: 158 HYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRK 217
HY+KRGTYDLKKI+EYAKKKDFTSIIVVHTNRREPDALLIIG+PDGPTAHFKLSKLVLRK
Sbjct: 154 HYFKRGTYDLKKIVEYAKKKDFTSIIVVHTNRREPDALLIIGVPDGPTAHFKLSKLVLRK 213
Query: 218 DIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
DIKNHGNPTGH PELVLNNF TRLGHRVGRLIQSLFPQ PEF+GRRVVTFHNQRDFIFFR
Sbjct: 214 DIKNHGNPTGHKPELVLNNFTTRLGHRVGRLIQSLFPQDPEFKGRRVVTFHNQRDFIFFR 273
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
HH RYIFETKE K +++ GKK KD +SE
Sbjct: 274 HH--------------------------------RYIFETKEVKKAESKGKKDKDGESEN 301
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+QK I RLQECGPRFTLKL+SLQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 302 VPEQKTIARLQECGPRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 354
>gi|224130720|ref|XP_002320911.1| predicted protein [Populus trichocarpa]
gi|222861684|gb|EEE99226.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 278/355 (78%), Positives = 292/355 (82%), Gaps = 33/355 (9%)
Query: 36 ILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENT 95
ILPSMIKNKEKRSAVHAKLK QKKVEKRKKLKARDA EKRALELGEEPP R PRTIENT
Sbjct: 49 ILPSMIKNKEKRSAVHAKLKQQKKVEKRKKLKARDAEEKRALELGEEPPPRKIPRTIENT 108
Query: 96 REPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIP 155
RE DETVC+PDD ELFAGNDADEFSS+LK+ PKILITT RFNS RGPAFISELL VIP
Sbjct: 109 REFDETVCKPDD-ELFAGNDADEFSSVLKRDRIPKILITTSRFNSTRGPAFISELLEVIP 167
Query: 156 NSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVL 215
N+HYYKRGTYDLKKI+EYAKK+DFTS+IVVHTNRREPD LLIIGLPDGPTAHFKLS+LVL
Sbjct: 168 NAHYYKRGTYDLKKIVEYAKKQDFTSLIVVHTNRREPDGLLIIGLPDGPTAHFKLSRLVL 227
Query: 216 RKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 275
RKDIK+HGNPT H PELVL NF T LGHR+GRLIQSLFPQ P FRGRRVVTFHNQRD+IF
Sbjct: 228 RKDIKSHGNPTSHEPELVLTNFTTCLGHRIGRLIQSLFPQEPNFRGRRVVTFHNQRDYIF 287
Query: 276 FRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKS 335
FRHH RYIFETKESK SD+ GK KD K
Sbjct: 288 FRHH--------------------------------RYIFETKESKQSDSKGKNRKDGKG 315
Query: 336 EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
EK +QQKVI RLQECGPRFTLKL SLQH TFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 316 EKNTQQKVIARLQECGPRFTLKLRSLQHETFDTKGGEYEWVHKPEMDTSRRRFFL 370
>gi|297810003|ref|XP_002872885.1| hypothetical protein ARALYDRAFT_912074 [Arabidopsis lyrata subsp.
lyrata]
gi|297318722|gb|EFH49144.1| hypothetical protein ARALYDRAFT_912074 [Arabidopsis lyrata subsp.
lyrata]
Length = 347
Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust.
Identities = 276/392 (70%), Positives = 302/392 (77%), Gaps = 47/392 (11%)
Query: 1 MGAKRKKSEG--EELLNEGEKENDKNNENISKKMKKEILPSMIKNKEKRSAVHAKLKHQK 58
MG KRKK +G EE+ +EG ++ N + + ILPSMIKNK+KRS V+AK KH+K
Sbjct: 1 MGFKRKKGDGDGEEMESEGRGKSSFN----GTEKRSVILPSMIKNKDKRSKVYAKQKHEK 56
Query: 59 KVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADE 118
KVEK+KK++ARDAAEKRALELGEEPP +M P+TIENTRE DETVCRPDD+ELFA DADE
Sbjct: 57 KVEKQKKIRARDAAEKRALELGEEPPQKMIPKTIENTREADETVCRPDDEELFADIDADE 116
Query: 119 FSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKD 178
F+ +L++ PKILITTCRFNS RGPAFISELLSVIPNSHY KRGTYDLKKI+EYA KKD
Sbjct: 117 FNPVLRREITPKILITTCRFNSTRGPAFISELLSVIPNSHYQKRGTYDLKKIVEYATKKD 176
Query: 179 FTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFA 238
FTS+IVVHTNRREPDALLIIGLP GPTAHFKLS LVLRKDIKNHGNPT H PELVLNNF
Sbjct: 177 FTSLIVVHTNRREPDALLIIGLPTGPTAHFKLSNLVLRKDIKNHGNPTSHQPELVLNNFT 236
Query: 239 TRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSY 298
TRLG+RVGR QSLFP P FRGRRVVTFHNQRDFIFFRHH
Sbjct: 237 TRLGNRVGRFFQSLFPPDPNFRGRRVVTFHNQRDFIFFRHH------------------- 277
Query: 299 LTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 358
RYIFETKESK SD K KD Q+ + RLQECGPRFTLKL
Sbjct: 278 -------------RYIFETKESKQSD----KGKDG-----VQETIKPRLQECGPRFTLKL 315
Query: 359 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
V+LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL
Sbjct: 316 VTLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 347
>gi|356559438|ref|XP_003548006.1| PREDICTED: LOW QUALITY PROTEIN: ribosome production factor 1-like
[Glycine max]
Length = 354
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 273/353 (77%), Positives = 293/353 (83%), Gaps = 32/353 (9%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTRE 97
PSMIKNKEKRS +HAKLK QKK++KR K KARDAA KRAL+LGEEPP + PRTIENTRE
Sbjct: 34 PSMIKNKEKRSELHAKLKQQKKLDKRAKAKARDAALKRALDLGEEPPEKKVPRTIENTRE 93
Query: 98 PDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNS 157
DETVC+PDDDELFAGNDADEF SIL Q PKILITTCRF+S RGPAFISELLSVIPN+
Sbjct: 94 LDETVCKPDDDELFAGNDADEFGSILNQQQTPKILITTCRFHSTRGPAFISELLSVIPNA 153
Query: 158 HYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRK 217
HY+KRGTYDLKKI+EYAKKKDFTS+IVVHTNRREPDALLIIG+PDGPTAHFKLSKLVLRK
Sbjct: 154 HYFKRGTYDLKKIVEYAKKKDFTSVIVVHTNRREPDALLIIGVPDGPTAHFKLSKLVLRK 213
Query: 218 DIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
DIKNHGNPTGH PELVLNNF TRLGHRVGRLIQSLFPQ PEF+GRRVVTFHNQRDFIFFR
Sbjct: 214 DIKNHGNPTGHKPELVLNNFTTRLGHRVGRLIQSLFPQDPEFKGRRVVTFHNQRDFIFFR 273
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
HH RYIFETKE K +++ GKK K+ KSE
Sbjct: 274 HH--------------------------------RYIFETKEVKKTESKGKKDKEGKSEN 301
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+QK I RLQECGPRFTLKL+SLQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 302 VPEQKTIARLQECGPRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 354
>gi|82621156|gb|ABB86266.1| putative RNA processing factor 1-like [Solanum tuberosum]
Length = 335
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 263/358 (73%), Positives = 295/358 (82%), Gaps = 35/358 (9%)
Query: 33 KKEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTI 92
++ + PSMIKNKEKR+ VHAKLK QKKV+KRKK+KAR+AAEK+ALELGEEPP +M PRTI
Sbjct: 13 RESMRPSMIKNKEKRAVVHAKLKQQKKVDKRKKVKAREAAEKKALELGEEPPPKMVPRTI 72
Query: 93 ENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLS 152
ENTRE DETVC PDD+ELFAGND DEFS++LK +PKILITT R+NS RGPAFIS+L+S
Sbjct: 73 ENTRESDETVCLPDDEELFAGNDVDEFSAVLKNERSPKILITTSRYNSTRGPAFISDLIS 132
Query: 153 VIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSK 212
VIPN+HYYKRGTYDLKKI++YA +K+FTS+IVVHTNRREPDALL+IGLPDGPTAHFKLSK
Sbjct: 133 VIPNAHYYKRGTYDLKKIVQYANEKEFTSVIVVHTNRREPDALLVIGLPDGPTAHFKLSK 192
Query: 213 LVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRD 272
L+LRKDIKNHG PT H PELVL NF TRLGHRVGR+IQSLFPQ PEFRGRRVVTFHNQRD
Sbjct: 193 LMLRKDIKNHGKPTSHKPELVLTNFTTRLGHRVGRMIQSLFPQDPEFRGRRVVTFHNQRD 252
Query: 273 FIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKD 332
FIFFRHH RYIFETKESK ++ GKK+KD
Sbjct: 253 FIFFRHH--------------------------------RYIFETKESKQKESKGKKSKD 280
Query: 333 AKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
EK Q++ I RLQECGPRFTLKL+SLQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 281 ---EKNPQERTIARLQECGPRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 335
>gi|18411672|ref|NP_567213.1| ribosomal RNA processing brix domain-containing protein
[Arabidopsis thaliana]
gi|7268199|emb|CAB77726.1| hypothetical protein [Arabidopsis thaliana]
gi|15215626|gb|AAK91358.1| AT4g01560/F11O4_6 [Arabidopsis thaliana]
gi|21554359|gb|AAM63466.1| unknown [Arabidopsis thaliana]
gi|58652114|gb|AAW80882.1| At4g01560 [Arabidopsis thaliana]
gi|332656642|gb|AEE82042.1| ribosomal RNA processing brix domain-containing protein
[Arabidopsis thaliana]
Length = 343
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 267/391 (68%), Positives = 298/391 (76%), Gaps = 49/391 (12%)
Query: 1 MGAKRKKSEGEELLNEGEKENDKNNENISKKMKKE-ILPSMIKNKEKRSAVHAKLKHQKK 59
MG KRKK +G+ E + + + S K+ ILPSMIKNK+KRS V+AK KH+KK
Sbjct: 1 MGFKRKKDDGD---GEEMESDVRGKSTFSGGEKRNVILPSMIKNKDKRSKVYAKQKHEKK 57
Query: 60 VEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEF 119
+EK+KK++ARDAAEKRALELGEEPP +M P+TIENTRE DETVCRPDD+ELFA DADEF
Sbjct: 58 LEKQKKIRARDAAEKRALELGEEPPQKMIPKTIENTRESDETVCRPDDEELFADIDADEF 117
Query: 120 SSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDF 179
+ +L++ APK+L+TTCRFNS RGPA ISELLSVIPNSHY KRGTYDLKKI+EYA KKDF
Sbjct: 118 NPVLRREIAPKVLLTTCRFNSTRGPALISELLSVIPNSHYQKRGTYDLKKIVEYATKKDF 177
Query: 180 TSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFAT 239
TS+IVVHTNRREPDALLIIGLP+GPTAHFKLS LVLRKDIKNHGNPT H PELVLNNF T
Sbjct: 178 TSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNHGNPTSHQPELVLNNFTT 237
Query: 240 RLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYL 299
RLG+RVGR QSLFP P FRGRRVVTFHNQRDFIFFRHH
Sbjct: 238 RLGNRVGRFFQSLFPPDPNFRGRRVVTFHNQRDFIFFRHH-------------------- 277
Query: 300 TSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 359
RYIFETKES KS+K ++ + RLQECGPRFTLKLV
Sbjct: 278 ------------RYIFETKES-------------KSDKGKEETIKPRLQECGPRFTLKLV 312
Query: 360 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL
Sbjct: 313 TLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 343
>gi|242094590|ref|XP_002437785.1| hypothetical protein SORBIDRAFT_10g002530 [Sorghum bicolor]
gi|241916008|gb|EER89152.1| hypothetical protein SORBIDRAFT_10g002530 [Sorghum bicolor]
Length = 362
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/366 (69%), Positives = 287/366 (78%), Gaps = 37/366 (10%)
Query: 29 SKKMKKE----ILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPP 84
KK +KE ILPS IKNK+KR VHAKLK +KK +KR + R A +RA ELGE+PP
Sbjct: 30 GKKARKEKAEAILPSQIKNKDKRREVHAKLKREKKAQKRALARERGQAARRAEELGEQPP 89
Query: 85 ARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGP 144
R PRTIENTREPDETVCRPDD ELFAGNDADEF+++LKQ PKILITTCRFNS RGP
Sbjct: 90 ERQVPRTIENTREPDETVCRPDDQELFAGNDADEFNAVLKQHITPKILITTCRFNSGRGP 149
Query: 145 AFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGP 204
AFI EL+ VIPNSHY KRGTY+LKKI++YAK +DFTS+IVVHTNRREPDALLIIGLPDGP
Sbjct: 150 AFIDELMQVIPNSHYVKRGTYELKKIVDYAKNRDFTSLIVVHTNRREPDALLIIGLPDGP 209
Query: 205 TAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 264
TAHFKLSKLVLRKDIKNHGNPT H PELVLNNF TRLGHRVGR+IQSLFPQ P FRGRRV
Sbjct: 210 TAHFKLSKLVLRKDIKNHGNPTSHKPELVLNNFTTRLGHRVGRMIQSLFPQDPNFRGRRV 269
Query: 265 VTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSD 324
VTFHNQRD+IFFRHH RYIF+TKE K +
Sbjct: 270 VTFHNQRDYIFFRHH--------------------------------RYIFDTKEKKVAS 297
Query: 325 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTS 384
+ KKAK ++S+ S+++VI RLQECGPRF LKL++LQHGTFDTK GE+EWVHKP+MDTS
Sbjct: 298 KD-KKAKTSESKSESEKQVICRLQECGPRFVLKLLTLQHGTFDTKSGEYEWVHKPDMDTS 356
Query: 385 RRRFFL 390
RRRFFL
Sbjct: 357 RRRFFL 362
>gi|226497220|ref|NP_001141844.1| hypothetical protein [Zea mays]
gi|194706152|gb|ACF87160.1| unknown [Zea mays]
gi|413950306|gb|AFW82955.1| hypothetical protein ZEAMMB73_160675 [Zea mays]
Length = 360
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/376 (67%), Positives = 284/376 (75%), Gaps = 35/376 (9%)
Query: 15 NEGEKENDKNNENISKKMKKEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEK 74
+EGE + + + K+ + ILPS IKNK+KR VHAKLK +KK +KR + R A +
Sbjct: 20 DEGEGRSGRKGKKARKEKAEAILPSQIKNKDKRREVHAKLKREKKAQKRALARERGQAAR 79
Query: 75 RALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILIT 134
RA ELGE+PP R PRTIENTREPDETVCRPDD ELFAGNDADEFS++LKQ PKILIT
Sbjct: 80 RAEELGEQPPERQVPRTIENTREPDETVCRPDDQELFAGNDADEFSAVLKQHITPKILIT 139
Query: 135 TCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDA 194
TCRFNS RGPAFI EL+ VIPNS Y KRGTY+LKKI+EYA +DFTS++VVHTNRREPDA
Sbjct: 140 TCRFNSGRGPAFIDELMQVIPNSQYVKRGTYELKKIVEYANNRDFTSLVVVHTNRREPDA 199
Query: 195 LLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP 254
LLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT H PELVLNNF TRLGHRVGR+IQSLFP
Sbjct: 200 LLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTSHKPELVLNNFTTRLGHRVGRMIQSLFP 259
Query: 255 QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYI 314
Q P FRGRRVVTFHNQRD+IFFRHH RYI
Sbjct: 260 QDPNFRGRRVVTFHNQRDYIFFRHH--------------------------------RYI 287
Query: 315 FETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE 374
FETKE K + + SEK Q+VI RLQECGPRFTLKL++LQHGTFDT+ GE+E
Sbjct: 288 FETKEKKVASKEKTSGSKSGSEK---QQVICRLQECGPRFTLKLLTLQHGTFDTRSGEYE 344
Query: 375 WVHKPEMDTSRRRFFL 390
WVHKP+MDTSRRRFFL
Sbjct: 345 WVHKPDMDTSRRRFFL 360
>gi|358346852|ref|XP_003637478.1| Ribosome production factor [Medicago truncatula]
gi|355503413|gb|AES84616.1| Ribosome production factor [Medicago truncatula]
Length = 326
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/351 (72%), Positives = 279/351 (79%), Gaps = 34/351 (9%)
Query: 42 KNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDET 101
K K+ S +HAKLKHQKK+EKR K ARDAA KRA+ELGEEPP + P+TIENTRE DET
Sbjct: 8 KTKKNESEIHAKLKHQKKLEKRAKSNARDAAVKRAIELGEEPPEKKVPKTIENTREVDET 67
Query: 102 VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYK 161
VC+PDD+ELFAGNDADEFSSILK+ +PKILITTCRFNS RGPA ISELL VIPN+HY+K
Sbjct: 68 VCKPDDEELFAGNDADEFSSILKRQQSPKILITTCRFNSTRGPALISELLQVIPNAHYFK 127
Query: 162 RGTYDLKK--IIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
RGTYDLKK I+EYA KKDFTS++VVHTNRREP+ALLIIGLP+GPTAHFKL+ LVLRKDI
Sbjct: 128 RGTYDLKKVMIVEYANKKDFTSLVVVHTNRREPNALLIIGLPEGPTAHFKLTNLVLRKDI 187
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
KNHG PT H PELVLNNF TRLGHRVGR+IQSLFPQ PEF+GRRVVTFHNQRDFIFFRHH
Sbjct: 188 KNHGVPTSHQPELVLNNFTTRLGHRVGRMIQSLFPQDPEFKGRRVVTFHNQRDFIFFRHH 247
Query: 280 RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS 339
RYIFETKE K ++ GK +D KSEK
Sbjct: 248 --------------------------------RYIFETKEIKKIESKGKNDEDGKSEKVP 275
Query: 340 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
K I RLQECGPRFTLKL SLQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 276 DHKTIARLQECGPRFTLKLKSLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 326
>gi|449437644|ref|XP_004136601.1| PREDICTED: ribosome production factor 1-like [Cucumis sativus]
gi|449524700|ref|XP_004169359.1| PREDICTED: ribosome production factor 1-like [Cucumis sativus]
Length = 332
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/361 (72%), Positives = 289/361 (80%), Gaps = 32/361 (8%)
Query: 30 KKMKKEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTP 89
+K K I+PS IKNKEKR+ VHA LKHQKK+EKRK+ KARDAAEK+ALELGEE P R P
Sbjct: 4 EKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIP 63
Query: 90 RTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISE 149
RTIENTRE DETVC+PDD+ELFAGNDADEFSSI+K+ PKILITTCRFNS GPAFISE
Sbjct: 64 RTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILITTCRFNSTIGPAFISE 123
Query: 150 LLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFK 209
LLSVIPN+HYYKRGT DLKKI+EYA KDFTS++VVHT+RR+ D LLIIGLP+GPTAHFK
Sbjct: 124 LLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFK 183
Query: 210 LSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHN 269
+S +VLRK+IKNHGNPTGH PELVL NF TRLG RVGRLIQSLFPQ P FRGRRVVTFHN
Sbjct: 184 ISNVVLRKEIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHN 243
Query: 270 QRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKK 329
QRDFIFFRHH RYIFE+KE+K + KK
Sbjct: 244 QRDFIFFRHH--------------------------------RYIFESKENKKEADSKKK 271
Query: 330 AKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFF 389
+K K EK QQKVI RLQECGPRFT+KL+SLQHGTFD+KGGE+EWVHKPEMDTSRRRFF
Sbjct: 272 SKGTKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF 331
Query: 390 L 390
L
Sbjct: 332 L 332
>gi|55296455|dbj|BAD68651.1| putative RNA processing factor 1 [Oryza sativa Japonica Group]
gi|55296996|dbj|BAD68471.1| putative RNA processing factor 1 [Oryza sativa Japonica Group]
gi|218197524|gb|EEC79951.1| hypothetical protein OsI_21547 [Oryza sativa Indica Group]
Length = 360
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 253/394 (64%), Positives = 299/394 (75%), Gaps = 38/394 (9%)
Query: 1 MGAKRKKSEGEELLNEGEKENDKNNENISKKMKKE----ILPSMIKNKEKRSAVHAKLKH 56
M +RK+ + + G+ + +++ KK +KE +LPS IKNK+KR VHAKLK
Sbjct: 1 MAKERKRRQPADAPPPGDDDEGRDHRR-EKKPRKERPDPVLPSQIKNKDKRKEVHAKLKR 59
Query: 57 QKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDA 116
+KK +KRK + R A +RA+ELGE+PP ++ PRTIENTREPDETVCRPDD ELFAGNDA
Sbjct: 60 EKKAQKRKLARERGQAAQRAVELGEQPPEKLVPRTIENTREPDETVCRPDDQELFAGNDA 119
Query: 117 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
DEF+++LKQ PK+LITTCRFNS RGPAFI EL+ VIPNS Y KRGTY+LKKI+EYA
Sbjct: 120 DEFNAVLKQQTTPKVLITTCRFNSGRGPAFIEELMQVIPNSCYVKRGTYELKKIVEYANN 179
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 236
+DFTS++VVHTNRREPDALLII LP GPTAHFKLSKL+LRKDIKNHGNPT H PELVLNN
Sbjct: 180 RDFTSLVVVHTNRREPDALLIINLPAGPTAHFKLSKLILRKDIKNHGNPTSHKPELVLNN 239
Query: 237 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILC 296
F TRLGHRVGR+IQSLFPQ P FRGRRVVTFHNQRD+IFFRHH
Sbjct: 240 FTTRLGHRVGRMIQSLFPQEPNFRGRRVVTFHNQRDYIFFRHH----------------- 282
Query: 297 SYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 356
RYIFE KE+K + + KKAK ++S+ +++VI RLQECGPRFTL
Sbjct: 283 ---------------RYIFEMKENKIA-SKDKKAKTSESKSQPEKQVICRLQECGPRFTL 326
Query: 357 KLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
KL++LQHGTFDTK GE+EWVHKP+MDTSRRRFFL
Sbjct: 327 KLLTLQHGTFDTKNGEYEWVHKPDMDTSRRRFFL 360
>gi|255548131|ref|XP_002515122.1| U3 small nucleolar ribonucleoprotein protein imp4, putative
[Ricinus communis]
gi|223545602|gb|EEF47106.1| U3 small nucleolar ribonucleoprotein protein imp4, putative
[Ricinus communis]
Length = 362
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 280/397 (70%), Positives = 306/397 (77%), Gaps = 42/397 (10%)
Query: 1 MGAKRKKSEGEELLNEGEKE-------NDKNNENISKKMKKEILPSMIKNKEKRSAVHAK 53
MG KRKKSE E N + E +++ ++ KKEILPS IKNKEKRSA AK
Sbjct: 1 MGGKRKKSEDAEYENGEDLEIKKKKKKKKNDDDKEGEEKKKEILPSTIKNKEKRSAALAK 60
Query: 54 LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAG 113
LKH KK+EKRKK+KARDA+EKRALELGEEPP R TPRTIENTRE DETVC+PDDDELFAG
Sbjct: 61 LKHLKKLEKRKKIKARDASEKRALELGEEPPPRQTPRTIENTREFDETVCKPDDDELFAG 120
Query: 114 NDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEY 173
NDADEFS IL++ PKILITTCRFNS RGP FI E+LSVIPN+ Y KRGTYDLKKIIEY
Sbjct: 121 NDADEFSLILRRERTPKILITTCRFNSTRGPLFIKEMLSVIPNAEYRKRGTYDLKKIIEY 180
Query: 174 AKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELV 233
A KKDFT+II VHT+RREPDALLIIGLP GPTAHFKLS LVLRKDIKNHGNPT H PELV
Sbjct: 181 AIKKDFTTIIDVHTSRREPDALLIIGLPYGPTAHFKLSNLVLRKDIKNHGNPTNHQPELV 240
Query: 234 LNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWT 293
LNNF TRLGHR+GRLIQS+FPQ P FRGRRVVTFHNQRDFIFFRHH
Sbjct: 241 LNNFTTRLGHRIGRLIQSIFPQDPNFRGRRVVTFHNQRDFIFFRHH-------------- 286
Query: 294 ILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPR 353
RYIFETKE K +D+ G+K K EK +Q+KV+ RLQECGPR
Sbjct: 287 ------------------RYIFETKECKDNDSKGQK---VKGEKIAQEKVVARLQECGPR 325
Query: 354 FTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
FTLKL+SLQHGTFDTK GE+EWVHKPEMD SRRRFFL
Sbjct: 326 FTLKLISLQHGTFDTKSGEYEWVHKPEMDASRRRFFL 362
>gi|357110851|ref|XP_003557229.1| PREDICTED: ribosome production factor 1-like [Brachypodium
distachyon]
Length = 361
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/354 (68%), Positives = 270/354 (76%), Gaps = 33/354 (9%)
Query: 37 LPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTR 96
LPS IKNKEKRS V+AKLK +KK +KRK + R A +RA ELGEE P R PRTIENTR
Sbjct: 41 LPSEIKNKEKRSEVYAKLKREKKAQKRKLGRERGQAAQRAAELGEEVPERQVPRTIENTR 100
Query: 97 EPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPN 156
EPDETVCRPDD ELFAGNDADEF+++LKQ PK+LITTCRFNS RGPAFI EL+ VIP+
Sbjct: 101 EPDETVCRPDDQELFAGNDADEFNAVLKQQVTPKVLITTCRFNSGRGPAFIKELMEVIPD 160
Query: 157 SHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLR 216
+ Y RGTYDLKKI+EYA +DFTS++VVHTNRREPDALLII LPDGPTAHFKLSKL+LR
Sbjct: 161 AQYVNRGTYDLKKIVEYANNRDFTSVMVVHTNRREPDALLIINLPDGPTAHFKLSKLILR 220
Query: 217 KDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFF 276
KDIKNHGNPT H PELVLNNF TRLGHRVGR+IQSLFPQ P FRGRRVVTFHNQRD+IFF
Sbjct: 221 KDIKNHGNPTSHKPELVLNNFTTRLGHRVGRMIQSLFPQDPNFRGRRVVTFHNQRDYIFF 280
Query: 277 RHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSE 336
RHH RY+FE KE K + K +
Sbjct: 281 RHH--------------------------------RYVFEEKEIKVVSKDKKAKSSESKK 308
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+T +Q V RLQECGPRFTLKL++LQHGTFDTK GE+EWVHKP+MDTSRRRFFL
Sbjct: 309 QTEKQ-VTCRLQECGPRFTLKLITLQHGTFDTKSGEYEWVHKPDMDTSRRRFFL 361
>gi|326519999|dbj|BAK03924.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 355
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/354 (67%), Positives = 271/354 (76%), Gaps = 36/354 (10%)
Query: 37 LPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTR 96
LPS I+NKEKRS V+AKLK +KK +KR+ + R A +RA ELGEE P + PRTIENTR
Sbjct: 38 LPSEIRNKEKRSEVYAKLKREKKAQKRRLGRERGQAAQRAAELGEEVPEKQVPRTIENTR 97
Query: 97 EPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPN 156
EPDETVCRPDD ELFAGNDADEF+++ KQ PK+LITTCRFNS RGPAFI EL+ VIPN
Sbjct: 98 EPDETVCRPDDQELFAGNDADEFNAVFKQVVTPKVLITTCRFNSGRGPAFIKELMQVIPN 157
Query: 157 SHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLR 216
+ Y RGTYDLKKI+EYA ++FTS++VVHTNRREPDALLII LP+GPTAHFKLSKLVLR
Sbjct: 158 AQYVNRGTYDLKKIVEYANNREFTSVMVVHTNRREPDALLIINLPEGPTAHFKLSKLVLR 217
Query: 217 KDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFF 276
KDIKNHGNPT H PELVLNNF TRLGHRVGR+IQSLFPQ P FRGRRVVTFHNQRD+IFF
Sbjct: 218 KDIKNHGNPTSHKPELVLNNFTTRLGHRVGRMIQSLFPQDPNFRGRRVVTFHNQRDYIFF 277
Query: 277 RHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSE 336
RHH RYIFE KE K K K +K E
Sbjct: 278 RHH--------------------------------RYIFEEKEKKIVS----KDKKSKGE 301
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
++++V RLQECGPRFTLKL++LQHGTFDTK GE+EWVHKP++DTSRRRFFL
Sbjct: 302 TKTEKQVNCRLQECGPRFTLKLLTLQHGTFDTKSGEYEWVHKPDLDTSRRRFFL 355
>gi|326511531|dbj|BAJ91910.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 356
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/354 (67%), Positives = 271/354 (76%), Gaps = 36/354 (10%)
Query: 37 LPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTR 96
LPS I+NKEKRS V+AKLK +KK +KR+ + R A +RA ELGEE P + PRTIENTR
Sbjct: 39 LPSEIRNKEKRSEVYAKLKREKKAQKRRLGRERGQAAQRAAELGEEVPEKQVPRTIENTR 98
Query: 97 EPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPN 156
EPDETVCRPDD ELFAGNDADEF+++LKQ PK+LITTCRFNS RGPAFI EL+ VIPN
Sbjct: 99 EPDETVCRPDDQELFAGNDADEFNAVLKQVVTPKVLITTCRFNSGRGPAFIKELMQVIPN 158
Query: 157 SHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLR 216
+ Y RGTYDLKKI+EYA ++FTS++VVHTNRREPDALLII LP+GPTAHFKLSKLVLR
Sbjct: 159 AQYVNRGTYDLKKIVEYANNREFTSVMVVHTNRREPDALLIINLPEGPTAHFKLSKLVLR 218
Query: 217 KDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFF 276
KDIKNHGNPT H PELVLNNF TRLGHRVGR+IQSLFPQ P FRGRRVVTFHNQRD+IFF
Sbjct: 219 KDIKNHGNPTSHKPELVLNNFTTRLGHRVGRMIQSLFPQDPNFRGRRVVTFHNQRDYIFF 278
Query: 277 RHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSE 336
RHH RYIFE KE K K K +K E
Sbjct: 279 RHH--------------------------------RYIFEEKEKKIVS----KDKKSKGE 302
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
++++V RLQECGPRFTLKL +LQHGTFDTK GE+EWVHKP++DTSRRRFFL
Sbjct: 303 TKTEKQVNCRLQECGPRFTLKLQTLQHGTFDTKSGEYEWVHKPDLDTSRRRFFL 356
>gi|3695379|gb|AAC62782.1| F11O4.6 [Arabidopsis thaliana]
Length = 434
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/408 (63%), Positives = 292/408 (71%), Gaps = 72/408 (17%)
Query: 1 MGAKRKKSEGEELLNEGEKENDKNNENISKKMKKE-ILPSMIKNKEKRSAVHAKLKHQKK 59
MG KRKK +G+ E + + + S K+ ILPSMIKNK+KRS V+AK KH+KK
Sbjct: 1 MGFKRKKDDGD---GEEMESDVRGKSTFSGGEKRNVILPSMIKNKDKRSKVYAKQKHEKK 57
Query: 60 VEKRKKLKARDAAEKRALELGEE-------------PPARMTPRTIENTREPDETVCRPD 106
+EK+KK++ARDAAEKRALELGEE PP +M P+TIENTRE DETVCRPD
Sbjct: 58 LEKQKKIRARDAAEKRALELGEEVTIWRSFFRDFLKPPQKMIPKTIENTRESDETVCRPD 117
Query: 107 DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD 166
D+ELFA DADEF+ +L++ APK+L+TTCRFNS RGPA ISELLSVIPNSHY KRGTYD
Sbjct: 118 DEELFADIDADEFNPVLRREIAPKVLLTTCRFNSTRGPALISELLSVIPNSHYQKRGTYD 177
Query: 167 LKKIIEYAKKKDFTSIIVVHTNRREP-------DALLIIGLPDGPTAHFKLSKLVLRKDI 219
LKKI+EYA KKDFTS+IVVHTNRREP DALLIIGLP+GPTAHFKLS LVLRKDI
Sbjct: 178 LKKIVEYATKKDFTSLIVVHTNRREPAFAISYVDALLIIGLPNGPTAHFKLSNLVLRKDI 237
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
KNHGNPT H PELVLNNF TRLG+RVGR QSLFP P FRGRRVVTFHNQRDFIFFRHH
Sbjct: 238 KNHGNPTSHQPELVLNNFTTRLGNRVGRFFQSLFPPDPNFRGRRVVTFHNQRDFIFFRHH 297
Query: 280 RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS 339
RYIFETKES KS+K
Sbjct: 298 --------------------------------RYIFETKES-------------KSDKGK 312
Query: 340 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK---PEMDTS 384
++ + RLQECGPRFTLKLV+LQHGTFDTKGGEFEWVHK PEMDTS
Sbjct: 313 EETIKPRLQECGPRFTLKLVTLQHGTFDTKGGEFEWVHKVKSPEMDTS 360
>gi|115466268|ref|NP_001056733.1| Os06g0137500 [Oryza sativa Japonica Group]
gi|113594773|dbj|BAF18647.1| Os06g0137500 [Oryza sativa Japonica Group]
gi|215706337|dbj|BAG93193.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 392
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/382 (63%), Positives = 287/382 (75%), Gaps = 38/382 (9%)
Query: 1 MGAKRKKSEGEELLNEGEKENDKNNENISKKMKKE----ILPSMIKNKEKRSAVHAKLKH 56
M +RK+ + + G+ + +++ KK +KE +LPS IKNK+KR VHAKLK
Sbjct: 1 MAKERKRRQPADAPPPGDDDEGRDHRR-EKKPRKERPDPVLPSQIKNKDKRKEVHAKLKR 59
Query: 57 QKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDA 116
+KK +KRK + R A +RA+ELGE+PP ++ PRTIENTREPDETVCRPDD ELFAGNDA
Sbjct: 60 EKKAQKRKLARERGQAAQRAVELGEQPPEKLVPRTIENTREPDETVCRPDDQELFAGNDA 119
Query: 117 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
DEF+++LKQ PK+LITTCRFNS RGPAFI EL+ VIPNS Y KRGTY+LKKI+EYA
Sbjct: 120 DEFNAVLKQQTTPKVLITTCRFNSGRGPAFIEELMQVIPNSCYVKRGTYELKKIVEYANN 179
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 236
+DFTS++VVHTNRREPDALLII LP GPTAHFKLSKL+LRKDIKNHGNPT H PELVLNN
Sbjct: 180 RDFTSLVVVHTNRREPDALLIINLPAGPTAHFKLSKLILRKDIKNHGNPTSHKPELVLNN 239
Query: 237 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILC 296
F TRLGHRVGR+IQSLFPQ P FRGRRVVTFHNQRD+IFFRHH
Sbjct: 240 FTTRLGHRVGRMIQSLFPQEPNFRGRRVVTFHNQRDYIFFRHH----------------- 282
Query: 297 SYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 356
RYIFE KE+K + + KKAK ++S+ +++VI RLQECGPRFTL
Sbjct: 283 ---------------RYIFEMKENKIA-SKDKKAKTSESKSQPEKQVICRLQECGPRFTL 326
Query: 357 KLVSLQHGTFDTKGGEFEWVHK 378
KL++LQHGTFDTK GE+EWVHK
Sbjct: 327 KLLTLQHGTFDTKNGEYEWVHK 348
>gi|224285331|gb|ACN40390.1| unknown [Picea sitchensis]
Length = 341
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/374 (63%), Positives = 274/374 (73%), Gaps = 34/374 (9%)
Query: 17 GEKENDKNNENISKKMKKEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRA 76
G+K + + + K++ PS+IKNK KRS +HAKLK +KKV+K+ ++K+RDA EKRA
Sbjct: 2 GKKRSRDGEDCAVDRQPKKMEPSLIKNKIKRSMLHAKLKQEKKVDKKSRIKSRDAVEKRA 61
Query: 77 LELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTC 136
LELGEEPP PRTIENTRE DETVC+PDD+ELFA N ADEFS+ PKILIT+
Sbjct: 62 LELGEEPPKPKVPRTIENTREADETVCQPDDEELFADNAADEFSAHFSHVQNPKILITSS 121
Query: 137 RFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALL 196
RF+S RG I ELLSVIPN+HYYKRGTY+LKKI+EYAK +DFT IIV+H NRREP+ +L
Sbjct: 122 RFHSTRGNQLIEELLSVIPNAHYYKRGTYELKKIVEYAKSRDFTFIIVIHQNRREPNGML 181
Query: 197 IIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQS 256
I LPDGPTAHF LS LVLRKDIKNHG PT H PEL+LNNF+TRLGHR+GR+I S+FP
Sbjct: 182 FINLPDGPTAHFNLSSLVLRKDIKNHGRPTSHQPELILNNFSTRLGHRIGRMIASVFPHD 241
Query: 257 PEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFE 316
P FRGRRVVTFHNQRDFIFFRHH RYIFE
Sbjct: 242 PNFRGRRVVTFHNQRDFIFFRHH--------------------------------RYIFE 269
Query: 317 TKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV 376
TK+ G K +D K K ++ VI RLQECGPRFTLKL+SLQHGTFDTKGGE+EWV
Sbjct: 270 TKDLNGGKPKEKATEDGK--KQQKETVIARLQECGPRFTLKLLSLQHGTFDTKGGEYEWV 327
Query: 377 HKPEMDTSRRRFFL 390
HKP+MDTSRRRFFL
Sbjct: 328 HKPDMDTSRRRFFL 341
>gi|222634921|gb|EEE65053.1| hypothetical protein OsJ_20052 [Oryza sativa Japonica Group]
Length = 327
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/393 (59%), Positives = 273/393 (69%), Gaps = 69/393 (17%)
Query: 1 MGAKRKKSEGEELLNEGEKENDKNNENISKKMKKE---ILPSMIKNKEKRSAVHAKLKHQ 57
M +RK+ + + G+ + +++ K K +LPS IKNK+KR
Sbjct: 1 MAKERKRRQPADAPPPGDDDEGRDHRREKKPRKDRPDPVLPSQIKNKDKR---------- 50
Query: 58 KKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDAD 117
+EPP ++ PRTIENTREPDETVCRPDD ELFAGNDAD
Sbjct: 51 -----------------------KEPPEKLVPRTIENTREPDETVCRPDDQELFAGNDAD 87
Query: 118 EFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKK 177
EF+++LKQ PK+LITTCRFNS RGPAFI EL+ VIPNS Y KRGTY+LKKI+EYA +
Sbjct: 88 EFNAVLKQQTTPKVLITTCRFNSGRGPAFIEELMQVIPNSCYVKRGTYELKKIVEYANNR 147
Query: 178 DFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNF 237
DFTS++VVHTNRREPDALLII LP GPTAHFKLSKL+LRKDIKNHGNPT H PELVLNNF
Sbjct: 148 DFTSLVVVHTNRREPDALLIINLPAGPTAHFKLSKLILRKDIKNHGNPTSHKPELVLNNF 207
Query: 238 ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCS 297
TRLGHRVGR+IQSLFPQ P FRGRRVVTFHNQRD+IFFRHH
Sbjct: 208 TTRLGHRVGRMIQSLFPQEPNFRGRRVVTFHNQRDYIFFRHH------------------ 249
Query: 298 YLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 357
RYIFE KE+K + + KKAK ++S+ +++VI RLQECGPRFTLK
Sbjct: 250 --------------RYIFEMKENKIA-SKDKKAKTSESKSQPEKQVICRLQECGPRFTLK 294
Query: 358 LVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L++LQHGTFDTK GE+EWVHKP+MDTSRRRFFL
Sbjct: 295 LLTLQHGTFDTKNGEYEWVHKPDMDTSRRRFFL 327
>gi|168038173|ref|XP_001771576.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677132|gb|EDQ63606.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 330
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/361 (56%), Positives = 255/361 (70%), Gaps = 40/361 (11%)
Query: 37 LPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTR 96
LPS IKNK KRSA +AK++ +K EK++++KARD AE++A+ELGE PP R P+TIENTR
Sbjct: 3 LPSNIKNKHKRSAEYAKVRAEKIKEKKQRIKARDTAERQAVELGETPPPRQVPKTIENTR 62
Query: 97 EPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPN 156
E DETV +PDD+EL + DEFS + PK+LITT + S+ FI ELL+VIPN
Sbjct: 63 EADETVAQPDDEELQVDDGVDEFSGHFARAQMPKLLITTSQECSSPTRKFIKELLTVIPN 122
Query: 157 SHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLR 216
+ +YKRG+YDLK+I+++AK +DFT++ VV+ NR++P+ LL+I LP+GPTAHFKLS + L
Sbjct: 123 ATFYKRGSYDLKQIVKFAKNRDFTTMFVVNENRKQPNGLLMIALPEGPTAHFKLSSIKLS 182
Query: 217 KDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFF 276
K IK HG PT H+PEL+LNNF TRLGHRVGRL S+FPQ P+FRGRR VTFHNQRDFIFF
Sbjct: 183 KKIKGHGKPTSHMPELLLNNFTTRLGHRVGRLFASVFPQDPQFRGRRAVTFHNQRDFIFF 242
Query: 277 RHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESK-------GSDANGKK 329
RHH RYIFE KE K G +++ KK
Sbjct: 243 RHH--------------------------------RYIFEEKEIKELAPVTIGVNSD-KK 269
Query: 330 AKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFF 389
++ A + + V+ RLQECGPRFTLKL SLQ GTFD+K GE+EWVHKP+MDTSRRRFF
Sbjct: 270 SRKAAPKTVKKNAVVARLQECGPRFTLKLQSLQSGTFDSKYGEYEWVHKPDMDTSRRRFF 329
Query: 390 L 390
L
Sbjct: 330 L 330
>gi|302818745|ref|XP_002991045.1| hypothetical protein SELMODRAFT_185811 [Selaginella moellendorffii]
gi|300141139|gb|EFJ07853.1| hypothetical protein SELMODRAFT_185811 [Selaginella moellendorffii]
Length = 337
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/365 (56%), Positives = 247/365 (67%), Gaps = 55/365 (15%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTRE 97
PS+I+NKE+RS A+LK +KK K+ ++KARDA EK +ELGE PP R TPRTIENTRE
Sbjct: 16 PSLIRNKERRSEAFAQLKREKKKAKKLRIKARDAREKECIELGEAPPPRKTPRTIENTRE 75
Query: 98 PDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNS 157
PDET+ RPDDDEL A DEF+ + +PK+LITTCR S R I EL SVIPN+
Sbjct: 76 PDETIVRPDDDELLADIATDEFAEHFNRDKSPKLLITTCRKCSKRTFKLILELQSVIPNT 135
Query: 158 HYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRK 217
YYKR LK++++ A ++DFT+I+V+H NRREPD ++I+ LP+GPTAHF+LS LVLRK
Sbjct: 136 EYYKRNKRSLKQLVKDATEQDFTAIVVIHENRREPDGMVIVNLPEGPTAHFRLSNLVLRK 195
Query: 218 DIK-----------NHGNPTGHIPELVLNNFATRLGHRVGR-LIQSLFPQSPEFRGRRVV 265
+IK NHG PT H+PEL+LNNF T LGHR+GR + SLF Q P FRGRRVV
Sbjct: 196 EIKARESDSPSFSINHGRPTSHLPELILNNFTTSLGHRIGRWMFASLFYQDPNFRGRRVV 255
Query: 266 TFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDA 325
TFHNQRD+IFFRHH RY+FE KE+K
Sbjct: 256 TFHNQRDYIFFRHH--------------------------------RYVFEPKETK---- 279
Query: 326 NGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSR 385
K E+ + VI RLQECGPRFTLKL+SLQHGTFDTK GE+EWVHKP+MDTSR
Sbjct: 280 -------QKGEQKKKTAVIARLQECGPRFTLKLLSLQHGTFDTKHGEYEWVHKPDMDTSR 332
Query: 386 RRFFL 390
RRFFL
Sbjct: 333 RRFFL 337
>gi|147787186|emb|CAN66830.1| hypothetical protein VITISV_030888 [Vitis vinifera]
Length = 383
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/251 (79%), Positives = 216/251 (86%), Gaps = 14/251 (5%)
Query: 1 MGAKRKKSEGEELLNEGEKENDKNNENISKKMKKEILPSMIKNKEKRSAVHAKLKHQKKV 60
MGAKRKK+E + ++ KK+ILPSMIKNKEKRSAVHAKLKHQKK+
Sbjct: 22 MGAKRKKTE------------EVGGDDEVGGGKKQILPSMIKNKEKRSAVHAKLKHQKKI 69
Query: 61 EKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFS 120
EKRKK KAR+AAEKRALELGEEPPA+ P TIENTRE DETVC+PDD+ELFAGNDADEFS
Sbjct: 70 EKRKKAKAREAAEKRALELGEEPPAKKIPHTIENTREFDETVCKPDDEELFAGNDADEFS 129
Query: 121 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKK--IIEYAKKKD 178
SIL + PKILITTCRFNS RGPAFISELLSVIPN+HYYKRGTYDLKK I+EYAKKKD
Sbjct: 130 SILNRKSDPKILITTCRFNSTRGPAFISELLSVIPNAHYYKRGTYDLKKVLIVEYAKKKD 189
Query: 179 FTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFA 238
FTS+IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD+KNHGNPT HIPELVLNNF
Sbjct: 190 FTSLIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDVKNHGNPTSHIPELVLNNFT 249
Query: 239 TRLGHRVGRLI 249
TRLGHR+GR I
Sbjct: 250 TRLGHRIGRYI 260
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 58/116 (50%), Gaps = 49/116 (42%)
Query: 312 RYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQ----------------------- 348
RYIFE+KESK D+ G K KDAK EK+S KV+ RLQ
Sbjct: 258 RYIFESKESKQGDSKGNKDKDAKGEKSSXGKVVARLQVQVLMDCPQLQLLSTLIFLPHYF 317
Query: 349 --------------------------ECGPRFTLKLVSLQHGTFDTKGGEFEWVHK 378
ECGPRFTLKL+SLQHGTFDTKGGE+EWVHK
Sbjct: 318 SNPGSALARKXNYYRPAVSYRPIIRPECGPRFTLKLISLQHGTFDTKGGEYEWVHK 373
>gi|302839132|ref|XP_002951123.1| hypothetical protein VOLCADRAFT_42845 [Volvox carteri f.
nagariensis]
gi|300263452|gb|EFJ47652.1| hypothetical protein VOLCADRAFT_42845 [Volvox carteri f.
nagariensis]
Length = 319
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 176/358 (49%), Positives = 228/358 (63%), Gaps = 45/358 (12%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S I+NK+KRS ++ KLKHQK+ K+ + R RA ELG EPP + T+ENTRE
Sbjct: 1 SGIRNKQKRSELYHKLKHQKEASGAKERRKRQKDAARAEELGLEPPPKPVQHTLENTREA 60
Query: 99 DETVCRPDDDELFAGNDADEFSSI--LKQGCAPKILITTCRFNSNRGPAFISELLSVIPN 156
D+T+ P+D E+ A + DEF+ + APK+LITT S F+SE+L ++P
Sbjct: 61 DDTMVDPEDAEVMADENDDEFAGVSHFANARAPKVLITTSYKPSKIMYTFLSEMLELLPC 120
Query: 157 SHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREP---DALLIIGLPDGPTAHFKLSKL 213
+ YYKR + LKKI+++A +D+T ++VV+ +R++ + LL++ LPDGPTAHF+LS L
Sbjct: 121 AEYYKRNGFPLKKIVKFAANRDYTDLLVVNEDRKQAGIINGLLLVHLPDGPTAHFRLSNL 180
Query: 214 VLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
L KDIK HG T H PEL+LN+F TRLGHR+GR++ SLFPQ P+FRGRRVVTFHNQRDF
Sbjct: 181 KLGKDIKGHGRTTSHKPELILNHFDTRLGHRLGRMLASLFPQDPQFRGRRVVTFHNQRDF 240
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGS-DANGKKAKD 332
IF RHH RYIFE KE++ S DA G AK
Sbjct: 241 IFVRHH--------------------------------RYIFEEKETRDSGDAKGDSAKK 268
Query: 333 AKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
K+ V RLQE GPRF+LKL+SLQ GTFD++ GEFEW+ K E TSRRRFFL
Sbjct: 269 KKA-------VTARLQELGPRFSLKLLSLQKGTFDSRNGEFEWLPKKENKTSRRRFFL 319
>gi|307104623|gb|EFN52876.1| hypothetical protein CHLNCDRAFT_26344 [Chlorella variabilis]
Length = 341
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 184/353 (52%), Positives = 221/353 (62%), Gaps = 44/353 (12%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK+ R A +AKLKH+K K+K+ R+ RA ELG EPP + P+TIENTRE
Sbjct: 32 SHIKNKQVRGAKYAKLKHEKNKLKKKERALREKEVARAEELGIEPPPKPVPKTIENTREK 91
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET+ +PDD E+ A D DEF+ K+ P +LITT + FISELL V+P +
Sbjct: 92 DETMVQPDDAEVAADEDQDEFAEHFKRVRPPNVLITTSYKVTGAMYRFISELLEVLPCAT 151
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
YYKR Y LKKI+EYAK +DFT ++V + +R++ + LL++ LPDGPTA F+LS LVL D
Sbjct: 152 YYKRQGYPLKKIVEYAKSRDFTDLMVFNEDRKQINGLLLVHLPDGPTAQFRLSNLVLSND 211
Query: 219 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
IK H T H PELVLNNF TRLGHRVGR+ SLF Q P FRGRRVVTFHNQRDFIFFRH
Sbjct: 212 IKGHARATSHRPELVLNNFDTRLGHRVGRMFASLFHQDPTFRGRRVVTFHNQRDFIFFRH 271
Query: 279 HRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKT 338
H RYIFE ++ K K +K
Sbjct: 272 H--------------------------------RYIFEERQKK-----------EKGKKE 288
Query: 339 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
V RLQE GPRFTLKL SLQ GTF++KGGEFEW+HK E DTSRR+F L
Sbjct: 289 KVNTVKARLQEIGPRFTLKLQSLQKGTFNSKGGEFEWMHKAGEQDTSRRKFQL 341
>gi|320165875|gb|EFW42774.1| MEE49 [Capsaspora owczarzaki ATCC 30864]
Length = 350
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/359 (44%), Positives = 209/359 (58%), Gaps = 61/359 (16%)
Query: 33 KKEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTI 92
++++L M K K + ++ +LKH K V +RK+ + + AE+R +LG+ P + P+TI
Sbjct: 52 RQQMLADM-KCKTLKKDLYKQLKHDKSVARRKE-RDQKLAERR--QLGDAAPPKEVPKTI 107
Query: 93 ENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLS 152
E+TRE DET+ PDD E+ DEF++ PK+LITT F+ +L++
Sbjct: 108 ESTREFDETIVNPDDQEVVEDEAMDEFANYFNGETLPKLLITTSIKPVGETFKFVQDLVT 167
Query: 153 VIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSK 212
IPN+ Y R +DLK+IIE+AK ++FT +++++ N +E D L+I LPDGPTAHFKLS
Sbjct: 168 AIPNATYVPRQKFDLKQIIEFAKNREFTDVMLINENNKEADGLIITHLPDGPTAHFKLSS 227
Query: 213 LVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRD 272
+ + K I+NH + H PELVLNNF TRLGH VGR+ +LFP PEF GRRV+TFHNQRD
Sbjct: 228 IQIAKTIRNHARSSDHRPELVLNNFNTRLGHTVGRMFATLFPHDPEFVGRRVITFHNQRD 287
Query: 273 FIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKD 332
FIFFRHH RYIF + G
Sbjct: 288 FIFFRHH--------------------------------RYIFRNAQKVG---------- 305
Query: 333 AKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
LQE GPRFTLKL SLQ GTFD K GE+EW HK EMDTSRRRFFL
Sbjct: 306 --------------LQEIGPRFTLKLRSLQKGTFDAKYGEYEWTHKRGEMDTSRRRFFL 350
>gi|198436623|ref|XP_002127271.1| PREDICTED: similar to Rpf1-pending-prov protein [Ciona
intestinalis]
Length = 351
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 161/384 (41%), Positives = 218/384 (56%), Gaps = 62/384 (16%)
Query: 8 SEGEELLNEGEKENDKNNENISKKMKKEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLK 67
S+ +++E ++D NN N + I S I+NK++R+A K++ +++ EK + K
Sbjct: 29 SDIASVIDENPLKDDANNNNNESMPQNNI--SQIRNKDRRTAAFIKMRKEQRKEKIRLRK 86
Query: 68 ARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGC 127
R K +LG+ P P+TIEN RE ++T+ +PDD E+ ++DE +S ++
Sbjct: 87 QRQNMRK---QLGKNAPPVAPPKTIENRREKEDTMVQPDDVEVLLDEESDEMASYFERKT 143
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHT 187
PKILITT +R F+ EL PNS + R DLKK+I K FT II+V+
Sbjct: 144 TPKILITTSDRPRSRTTKFLKELSEGFPNSTVFYRRALDLKKVIPQCIMKGFTDIIIVNE 203
Query: 188 NRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGR 247
+R+ P+ LL+ LP+GPT HFK+S + LRK+IKN P+ H PE++LNNF TRLGH +GR
Sbjct: 204 DRKTPNGLLLCHLPEGPTVHFKMSNVKLRKEIKNSTTPSEHQPEIILNNFGTRLGHTIGR 263
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFC 307
+ +LFP +PEF GR+VVTFHNQRDFIFFRHH
Sbjct: 264 MFTTLFPHNPEFIGRQVVTFHNQRDFIFFRHH---------------------------- 295
Query: 308 YYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 367
RYIF ++ G LQE GPRFTLKL SLQ GTFD
Sbjct: 296 ----RYIFRNEKRVG------------------------LQEIGPRFTLKLRSLQKGTFD 327
Query: 368 TKGGEFEWVHK-PEMDTSRRRFFL 390
+K GE+EW+HK EMDTSRRRF L
Sbjct: 328 SKFGEYEWIHKRHEMDTSRRRFHL 351
>gi|159467973|ref|XP_001692157.1| hypothetical protein CHLREDRAFT_115941 [Chlamydomonas reinhardtii]
gi|158278343|gb|EDP04107.1| predicted protein [Chlamydomonas reinhardtii]
Length = 309
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 162/352 (46%), Positives = 205/352 (58%), Gaps = 43/352 (12%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S I+NK+KR ++ KLKHQK+ K K+ + + E +ALE G EPP + TI+N RE
Sbjct: 1 SGIRNKQKRGELYHKLKHQKEKVKAKERRKKQKEEAKALEAGLEPPPKPLQHTIDNQREA 60
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
D+T+ P D+E+ A + DEF++ PK+LITT S F+SE+L V
Sbjct: 61 DDTMVDPTDEEIMADENDDEFAAHFANARPPKVLITTSYKPSKIMYTFLSEMLLVPRCCC 120
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
GT+ L +A + + T + + LL++ LPDGPTAHF+LS L L D
Sbjct: 121 PLPHGTWSLSASFTHAHASISHAPPCIPT---QINGLLLVHLPDGPTAHFRLSNLKLGAD 177
Query: 219 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
IK HG T H PEL+LN+F TRLGHR+GR+ SLFPQ P+FRGRRVVTFHNQRDFIF RH
Sbjct: 178 IKGHGRATQHKPELILNHFDTRLGHRMGRMFASLFPQDPQFRGRRVVTFHNQRDFIFVRH 237
Query: 279 HRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKT 338
H RY+FE KES+ + AKD +K
Sbjct: 238 H--------------------------------RYVFEEKESR-----DRAAKDPSKKKK 260
Query: 339 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ V+ RLQE GPRFTLKL SLQ GTFD+K GEFEW+ K E TSRRRFFL
Sbjct: 261 A---VVARLQELGPRFTLKLQSLQKGTFDSKNGEFEWLPKKENKTSRRRFFL 309
>gi|348672964|gb|EGZ12783.1| hypothetical protein PHYSODRAFT_354905 [Phytophthora sojae]
Length = 324
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 162/356 (45%), Positives = 207/356 (58%), Gaps = 63/356 (17%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRK-KLKARDAAEKRALELGEEPPARMTPRTIENTR 96
PS IKNK KR V K + +KK K+ +LK R AE E+GEE P +M PRTI+NTR
Sbjct: 29 PSHIKNKMKRQLVMQKYRKEKKEAKKAAQLKRRREAE----EMGEEAPPKMEPRTIDNTR 84
Query: 97 EPDETVCRPD-DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIP 155
E + T+ + D+E+ A DEF+SI PK++ITT F S FI +L+ ++P
Sbjct: 85 EKEVTMVSSEGDEEIEADERDDEFASIFANEETPKLMITTRPFPSGELYHFIKDLMDLLP 144
Query: 156 NSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVL 215
NS YYKRGT+D+K+I+++A K FT ++V+ + + +L+ LP+GPTA FK+S + L
Sbjct: 145 NSFYYKRGTFDIKEIVQFATNKKFTHLVVLSEKSKICNGMLVSRLPEGPTAFFKVSNVKL 204
Query: 216 RKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 275
IK G T H PEL+LNNF+TRLGHRVGR + SLF PEF G +VVTFHNQRDFIF
Sbjct: 205 TSSIKERGRRTNHQPELILNNFSTRLGHRVGRFLGSLFEHQPEFEGHQVVTFHNQRDFIF 264
Query: 276 FRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKS 335
RHH RY FE N KKA
Sbjct: 265 VRHH--------------------------------RYTFE---------NEKKA----- 278
Query: 336 EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
RLQE GPRFT+KL LQ GTFDTK GE+EW+HK ++DTSRR+F L
Sbjct: 279 ----------RLQEIGPRFTMKLRWLQQGTFDTKFGEYEWIHKQHQLDTSRRKFHL 324
>gi|395821852|ref|XP_003784245.1| PREDICTED: ribosome production factor 1 [Otolemur garnettii]
Length = 349
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 214/392 (54%), Gaps = 66/392 (16%)
Query: 6 KKSEGEELLNEGEKENDKNNENISKKMKKEILP-----SMIKNKEKRSAVHAKLKHQKKV 60
K+ E E D E+ + K P S IKNK++R + + K Q++
Sbjct: 17 KRKAATEEPQEAAVAGDGATESGVQPAKAAAFPPGFSISEIKNKQRRHLMFTRWKQQQRK 76
Query: 61 EKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFS 120
EK K E+ AL G++ P + P+TI+N R DET P+D+E+ DEF+
Sbjct: 77 EKLAAKKRL-KKEREAL--GDKAPPKPIPKTIDNQRVYDETTVDPNDEEVAYDEATDEFA 133
Query: 121 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 180
S + +PKILITT R +L +VIPNSH Y R LKKII +DFT
Sbjct: 134 SYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCISRDFT 193
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLNNFAT 239
+IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+IK G +PT HIPE++LNNF T
Sbjct: 194 DLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTT 253
Query: 240 RLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYL 299
RLGH VGR+ SLFP P+F GR+V TFHNQRD+IFFR H
Sbjct: 254 RLGHSVGRMFASLFPHDPQFVGRQVATFHNQRDYIFFRFH-------------------- 293
Query: 300 TSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 359
RYIF++++ G +QE GPRFTLKL
Sbjct: 294 ------------RYIFKSEKKVG------------------------IQELGPRFTLKLR 317
Query: 360 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 318 SLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|431897028|gb|ELK06292.1| Ribosome production factor 1 [Pteropus alecto]
Length = 349
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/400 (41%), Positives = 220/400 (55%), Gaps = 70/400 (17%)
Query: 2 GAKRKKS----EGEELLNEGEKENDKNNENISKKMKKEILP-----SMIKNKEKRSAVHA 52
G RKKS E L E D E+ + K P S IKNK++R +
Sbjct: 9 GGSRKKSLKRKAATEELQEAAVAEDGATESEGQTPKAAAFPPGFSISEIKNKQRRHLMFT 68
Query: 53 KLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFA 112
+ K Q ++++KL A+ +K LG++ P + P+TI+N R DET P+D+E+
Sbjct: 69 RWKQQ---QRKEKLAAKKKLKKEREALGDQAPPKPIPKTIDNQRVYDETTVDPNDEEVAF 125
Query: 113 GNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 172
DEF+S + +PKILITT R +L +VIPNSH Y R LKKII
Sbjct: 126 DEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIP 185
Query: 173 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPE 231
+DFT +IV++ +R+ P+ L++ LP GPTAHFK+S + LRK+IK G +PT HIPE
Sbjct: 186 QCISRDFTDLIVINEDRKTPNGLILSHLPSGPTAHFKMSSVRLRKEIKRRGKDPTEHIPE 245
Query: 232 LVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYM 291
++LNNF TRLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR H
Sbjct: 246 IILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFH------------ 293
Query: 292 WTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECG 351
RYIF++++ G +QE G
Sbjct: 294 --------------------RYIFKSEKKVG------------------------IQELG 309
Query: 352 PRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
PRFTLKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 310 PRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|226875221|gb|ACO88964.1| RNA processing factor 1 (predicted) [Dasypus novemcinctus]
Length = 349
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/354 (44%), Positives = 209/354 (59%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q ++++KL+A+ +K LG++ P + TP+TI+N R P
Sbjct: 55 SEIKNKQRRHLMFTRWKQQ---QRKEKLEAKKKLKKEREALGDKAPPKPTPKTIDNQRVP 111
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET+ P+D+E+ DEF+S + +PKILITT R +L +VIPNSH
Sbjct: 112 DETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSH 171
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKKII +DFT +IVV+ +R+ P+ L++ LP GPTAHFK+S + LRK+
Sbjct: 172 VYYRRGLALKKIIPQCISRDFTDLIVVNEDRKTPNGLILSHLPHGPTAHFKMSSVRLRKE 231
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G +P HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR
Sbjct: 232 IKKKGKDPKEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFR 291
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF++++ G
Sbjct: 292 FH--------------------------------RYIFKSEKKVG--------------- 304
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 305 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|351715120|gb|EHB18039.1| Ribosome production factor 1 [Heterocephalus glaber]
Length = 349
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 217/392 (55%), Gaps = 66/392 (16%)
Query: 6 KKSEGEELLNEGEKENDKNNENISKKMKKEILP-----SMIKNKEKRSAVHAKLKHQKKV 60
K+ E EG D E + + K LP S IKNK++R + + K Q
Sbjct: 17 KRKAAMEEPREGSVAGDGATEGVVQPPKATALPPGFSISEIKNKQRRHLMFTRWKQQ--- 73
Query: 61 EKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFS 120
++++KL A+ +K LG++ P + P+TI+N R DET P+D+E+ DEF+
Sbjct: 74 QRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEATDEFA 133
Query: 121 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 180
+ +PKILITT R +L +VIPNSH Y R LKKII +DFT
Sbjct: 134 PYFNRQTSPKILITTSDRPHGRTVRLCQQLSTVIPNSHVYYRRGLALKKIIPQCISRDFT 193
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLNNFAT 239
+IV++ +R+ P+ L++ LPDGPTAHFK+S + LRK+IK G +PT H+PE++LNNF T
Sbjct: 194 DLIVINEDRKIPNGLILSHLPDGPTAHFKMSSVRLRKEIKRRGKDPTEHVPEIILNNFTT 253
Query: 240 RLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYL 299
RLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR H
Sbjct: 254 RLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFH-------------------- 293
Query: 300 TSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 359
RYIF +++ G +QE GPRFTLKL
Sbjct: 294 ------------RYIFRSEKKVG------------------------IQELGPRFTLKLR 317
Query: 360 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 318 SLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|410967612|ref|XP_003990312.1| PREDICTED: LOW QUALITY PROTEIN: ribosome production factor 1 [Felis
catus]
Length = 349
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 202/354 (57%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q++ EK + LG++ P + P+TI+N R
Sbjct: 55 SEIKNKQRRHLMFTRWKQQQRKEKLAIKXKLKKERE---ALGDKAPPKPIPKTIDNQRVH 111
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET+ P+D+E+ DEF+S + +PKILITT R +L +VIPNSH
Sbjct: 112 DETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSH 171
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKKII +DFT +IV++ +R+ P+ L++ LP GPTAHFK+S + LRK+
Sbjct: 172 VYYRRGLALKKIIPQCISRDFTDLIVINEDRKTPNGLILSHLPSGPTAHFKMSSVRLRKE 231
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G +PT H+PE++LNNF TRLGH VGR+ SLFP +P+F GR+V TFHNQRD+IFFR
Sbjct: 232 IKRRGKDPTEHVPEIILNNFTTRLGHSVGRMFASLFPHNPQFIGRQVATFHNQRDYIFFR 291
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF++++ G
Sbjct: 292 FH--------------------------------RYIFKSEKKVG--------------- 304
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 305 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|149709677|ref|XP_001497217.1| PREDICTED: ribosome production factor 1-like [Equus caballus]
Length = 349
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/354 (43%), Positives = 208/354 (58%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q ++++KL A+ +K LG++ P + P+TI+N R
Sbjct: 55 SEIKNKQRRHLMFTRWKQQ---QRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVY 111
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET+ P+D+E+ DEF+S + +PKILITT R +L +VIPNSH
Sbjct: 112 DETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSH 171
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+
Sbjct: 172 VYYRRGLALKKIIPQCISRDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKE 231
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR
Sbjct: 232 IKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFR 291
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF++++ G
Sbjct: 292 FH--------------------------------RYIFKSEKKVG--------------- 304
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 305 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|134085755|ref|NP_001076886.1| ribosome production factor 1 [Bos taurus]
gi|133777568|gb|AAI14878.1| BXDC5 protein [Bos taurus]
gi|296489206|tpg|DAA31319.1| TPA: RNA processing factor 1 [Bos taurus]
gi|440912943|gb|ELR62461.1| Ribosome production factor 1 [Bos grunniens mutus]
Length = 349
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 221/396 (55%), Gaps = 68/396 (17%)
Query: 2 GAKRKKSEGEELLNEGEKENDKNNENISKKMKKEILP-----SMIKNKEKRSAVHAKLKH 56
G KRK + E E D E+ + K P S IKNK++R + + K
Sbjct: 15 GLKRKAATEES--QEAAVGEDGTTESGVQPPKTAAFPPGFSISEIKNKQRRHLMFTRWKQ 72
Query: 57 QKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDA 116
Q ++++KL A+ +K LG++ P + P+TI+N R DET+ P+D+E+
Sbjct: 73 Q---QRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYDETIVDPNDEEVAYDEAT 129
Query: 117 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
DEF+S + +PKILITT R +L +VIPNSH Y R LKKII
Sbjct: 130 DEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCIS 189
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLN 235
+DFT +IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+IK G +PT HIPE++LN
Sbjct: 190 RDFTDLIVINEDRKIPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHIPEIILN 249
Query: 236 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTIL 295
NF TRLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR H
Sbjct: 250 NFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFH---------------- 293
Query: 296 CSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 355
RYIF++++ G +QE GPRFT
Sbjct: 294 ----------------RYIFKSEKKVG------------------------IQELGPRFT 313
Query: 356 LKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
LKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 314 LKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|291398615|ref|XP_002715937.1| PREDICTED: RNA processing factor 1-like [Oryctolagus cuniculus]
Length = 349
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 203/354 (57%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q++ EK K + LG++ P + P+TI+N R
Sbjct: 55 SEIKNKQRRHLMFTRWKQQQRKEKLAAKKKLKKQRE---ALGDKAPPKPVPKTIDNQRVY 111
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET+ P+D+E+ DEF+S + +PKILITT R +L +VIPNSH
Sbjct: 112 DETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVKLCEQLSTVIPNSH 171
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+
Sbjct: 172 VYYRRGLALKKIIPQCISRDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKE 231
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G +PT H PE++LNNF TRLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR
Sbjct: 232 IKRRGKDPTEHRPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFR 291
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF++++ G
Sbjct: 292 FH--------------------------------RYIFKSEKKAG--------------- 304
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 305 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|441637454|ref|XP_003260310.2| PREDICTED: LOW QUALITY PROTEIN: ribosome production factor 1
[Nomascus leucogenys]
Length = 348
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/354 (43%), Positives = 206/354 (58%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q ++++KL A+ +K LG++ P + P+TI+N R
Sbjct: 54 SEIKNKQRRHLMFTRWKQQ---QRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVY 110
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P+D+E+ DEF+S + +PKILITT R +L +VIPNSH
Sbjct: 111 DETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSH 170
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKKII +DFT +IVV+ +R+ P+ L++ LP+GPTAHFK+S + LRK+
Sbjct: 171 VYYRRGLALKKIIPQCIARDFTDLIVVNEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKE 230
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR
Sbjct: 231 IKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFR 290
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF +++ G
Sbjct: 291 FH--------------------------------RYIFRSEKKVG--------------- 303
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 304 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 348
>gi|90085573|dbj|BAE91527.1| unnamed protein product [Macaca fascicularis]
Length = 349
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 217/392 (55%), Gaps = 66/392 (16%)
Query: 6 KKSEGEELLNEGEKENDKNNENISKKMKKEILP-----SMIKNKEKRSAVHAKLKHQKKV 60
K+ E + E D E+ + K P S IKNK++R + + K Q
Sbjct: 17 KRKAAVEEIQEAAGAGDGATESGVQPPKAAAFPPGFSISEIKNKQRRHLMFTRWKQQ--- 73
Query: 61 EKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFS 120
++++KL A+ +K LG++ P + P+TI+N R DET P+D+E+ DEF+
Sbjct: 74 QRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDESTDEFA 133
Query: 121 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 180
S + +PKILITT R +L +VIPNSH Y R LKKII ++FT
Sbjct: 134 SYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCIAREFT 193
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLNNFAT 239
+IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+IK G +PT HIPE++LNNF T
Sbjct: 194 DLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTT 253
Query: 240 RLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYL 299
RLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR H
Sbjct: 254 RLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFH-------------------- 293
Query: 300 TSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 359
RYIF +++ G +QE GPRFTLKL
Sbjct: 294 ------------RYIFRSEKKVG------------------------IQELGPRFTLKLR 317
Query: 360 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 318 SLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|417409906|gb|JAA51442.1| Putative ribosome bioproteinsis protein rpf1, partial [Desmodus
rotundus]
Length = 347
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/354 (43%), Positives = 206/354 (58%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q ++++KL A+ +K LG++ P + P+TI+N R
Sbjct: 53 SEIKNKQRRHLMFTRWKQQ---QRKEKLAAKKKLKKEREALGDKAPPKPIPKTIDNQRVY 109
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P D+E+ DEF+S + +PKILITT R +L +VIPNSH
Sbjct: 110 DETTVDPADEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSH 169
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+
Sbjct: 170 VYYRRGLALKKIIPQCISRDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKE 229
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR
Sbjct: 230 IKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFTGRQVATFHNQRDYIFFR 289
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF++++ G
Sbjct: 290 FH--------------------------------RYIFKSEKKVG--------------- 302
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 303 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 347
>gi|145341264|ref|XP_001415733.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575956|gb|ABO94025.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 319
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 159/363 (43%), Positives = 212/363 (58%), Gaps = 53/363 (14%)
Query: 37 LPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTR 96
L S IKNK++RS V+ KL+H++ V K+++ + R AE ALE GEEP R P+TIEN R
Sbjct: 1 LTSGIKNKQRRSEVYGKLRHERAVAKKQRRETRQKAEAAALEAGEEPAPRQIPKTIENQR 60
Query: 97 EPDETVCRPDDDELFAGNDA-DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIP 155
D T +D DA DEF+S Q +PKI+ITT R S F+ L +VIP
Sbjct: 61 VRDATHIDDLNDVDVVEQDAEDEFASYFSQATSPKIIITTSRKPSGDMFKFLENLFTVIP 120
Query: 156 NSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR-----EPDALLIIGLPDGPTAHFKL 210
N++YY R Y +K+I+++ + FT ++V + N++ + +L + LP+GPT +KL
Sbjct: 121 NAYYYARRNYQVKEIVKHGTARGFTDVLVFNENKKFSKGARVNGMLHVHLPEGPTCLYKL 180
Query: 211 SKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQ 270
S L L K+IK HG T H PEL+LNNF+TRLGHRV R+ S+FPQ PEF+GRRVVTFHNQ
Sbjct: 181 SSLKLSKEIKGHGRATSHYPELILNNFSTRLGHRVSRMFASVFPQKPEFKGRRVVTFHNQ 240
Query: 271 RDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKA 330
RDFIFFRHH RY+FE K
Sbjct: 241 RDFIFFRHH--------------------------------RYVFEEK------------ 256
Query: 331 KDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTS---RRR 387
KDA+ + RLQE GPRFTL+L+S+Q GTFD+K GE+E+V + D + RR+
Sbjct: 257 KDAEKPPPVNTMIQARLQELGPRFTLRLMSVQKGTFDSKHGEYEYVRSTDTDGTRHCRRK 316
Query: 388 FFL 390
F L
Sbjct: 317 FVL 319
>gi|197101149|ref|NP_001126626.1| ribosome production factor 1 [Pongo abelii]
gi|71153720|sp|Q5R631.1|RPF1_PONAB RecName: Full=Ribosome production factor 1; AltName: Full=Brix
domain-containing protein 5; AltName: Full=Ribosome
biogenesis protein RPF1
gi|55732160|emb|CAH92785.1| hypothetical protein [Pongo abelii]
Length = 349
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 155/354 (43%), Positives = 206/354 (58%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNKE+R + + K Q ++++KL A+ +K LG++ P + P+TI+N R
Sbjct: 55 SEIKNKERRHLMFTRWKQQ---QRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVY 111
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P+D+E+ DEF+S + +PKILITT R +L +VIPNSH
Sbjct: 112 DETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSH 171
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+
Sbjct: 172 VYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKE 231
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR
Sbjct: 232 IKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFR 291
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF +++ G
Sbjct: 292 FH--------------------------------RYIFRSEKKVG--------------- 304
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 305 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|296208364|ref|XP_002751060.1| PREDICTED: ribosome production factor 1 [Callithrix jacchus]
Length = 349
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 217/392 (55%), Gaps = 66/392 (16%)
Query: 6 KKSEGEELLNEGEKENDKNNENISKKMKKEILP-----SMIKNKEKRSAVHAKLKHQKKV 60
K+ E L + D E+ + K P S IKNK++R + + K Q
Sbjct: 17 KRKAAAEELQDAAFAGDGATESEGQPPKAAAFPPGFSISEIKNKQRRHLMFMRWKQQ--- 73
Query: 61 EKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFS 120
++++KL A+ +K LG++ P + P+TI+N R DET P+D+E+ DEF+
Sbjct: 74 QRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEATDEFA 133
Query: 121 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 180
S + +PKILITT R +L +VIPNSH Y R LKKII +DFT
Sbjct: 134 SYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCITRDFT 193
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLNNFAT 239
+IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+IK G +PT HIPE++LNNF T
Sbjct: 194 DLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTT 253
Query: 240 RLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYL 299
RLGH +GR+ S+FP +P+F GR+V TFHNQRD+IFFR H
Sbjct: 254 RLGHSIGRMFASVFPHNPQFIGRQVATFHNQRDYIFFRFH-------------------- 293
Query: 300 TSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 359
RYIF +++ G +QE GPRFTLKL
Sbjct: 294 ------------RYIFRSEKKVG------------------------IQELGPRFTLKLR 317
Query: 360 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 318 SLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|57088279|ref|XP_537096.1| PREDICTED: ribosome production factor 1 [Canis lupus familiaris]
Length = 349
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 203/354 (57%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q++ EK K + LG++ P + P+TI+N R
Sbjct: 55 SEIKNKQRRHLMFTRWKQQQRKEKLAIKKKLKKERE---ALGDKAPPKPVPKTIDNQRVY 111
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET+ P+D+E+ DEF+S + +PKILITT R +L +VIPNSH
Sbjct: 112 DETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSH 171
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKKII +DFT +IV++ +R+ P+ L++ LP GPTAHFK+S + LRK+
Sbjct: 172 VYYRRGLALKKIIPQCISRDFTDLIVINEDRKIPNGLILSHLPSGPTAHFKMSSVRLRKE 231
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR
Sbjct: 232 IKRRGKDPTEHIPEVILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFR 291
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF++++ G
Sbjct: 292 FH--------------------------------RYIFKSEKKVG--------------- 304
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 305 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|426330175|ref|XP_004026097.1| PREDICTED: ribosome production factor 1 [Gorilla gorilla gorilla]
Length = 349
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 212/376 (56%), Gaps = 66/376 (17%)
Query: 22 DKNNENISKKMKKEILP-----SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRA 76
D EN + K P S IKNK++R + + K Q ++++KL A+ +K
Sbjct: 33 DGATENGVQPPKAAAFPPGFSISEIKNKQRRHLMFTRWKQQ---QRKEKLAAKKKLKKER 89
Query: 77 LELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTC 136
LG++ P + P+TI+N R DET P+D+E+ DEF+S + +PKILITT
Sbjct: 90 EALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTS 149
Query: 137 RFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALL 196
R +L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L+
Sbjct: 150 DRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLI 209
Query: 197 IIGLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQ 255
+ LP+GPTAHFK+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP
Sbjct: 210 LSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPH 269
Query: 256 SPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIF 315
+P+F GR+V TFHNQRD+IFFR H RYIF
Sbjct: 270 NPQFIGRQVATFHNQRDYIFFRFH--------------------------------RYIF 297
Query: 316 ETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 375
+++ G +QE GPRFTLKL SLQ GTFD+K GE+EW
Sbjct: 298 RSEKKVG------------------------IQELGPRFTLKLRSLQKGTFDSKYGEYEW 333
Query: 376 VHKP-EMDTSRRRFFL 390
VHKP EMDTSRR+F L
Sbjct: 334 VHKPREMDTSRRKFHL 349
>gi|10433984|dbj|BAB14086.1| unnamed protein product [Homo sapiens]
gi|16359171|gb|AAH16051.1| Brix domain containing 5 [Homo sapiens]
gi|119593643|gb|EAW73237.1| brix domain containing 5 [Homo sapiens]
gi|312150426|gb|ADQ31725.1| brix domain containing 5 [synthetic construct]
Length = 349
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 212/376 (56%), Gaps = 66/376 (17%)
Query: 22 DKNNENISKKMKKEILP-----SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRA 76
D EN + K P S IKNK++R + + K Q ++++KL A+ +K
Sbjct: 33 DGATENGVQPPKAAAFPPGFSISEIKNKQRRHLMFTRWKQQ---QRKEKLAAKKKLKKER 89
Query: 77 LELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTC 136
LG++ P + P+TI+N R DET P+D+E+ DEF+S + +PKILITT
Sbjct: 90 EALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTS 149
Query: 137 RFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALL 196
R +L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L+
Sbjct: 150 DRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLI 209
Query: 197 IIGLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQ 255
+ LP+GPTAHFK+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP
Sbjct: 210 LSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPH 269
Query: 256 SPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIF 315
+P+F GR+V TFHNQRD+IFFR H RYIF
Sbjct: 270 NPQFIGRQVATFHNQRDYIFFRFH--------------------------------RYIF 297
Query: 316 ETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 375
+++ G +QE GPRFTLKL SLQ GTFD+K GE+EW
Sbjct: 298 RSEKKVG------------------------IQELGPRFTLKLRSLQKGTFDSKYGEYEW 333
Query: 376 VHKP-EMDTSRRRFFL 390
VHKP EMDTSRR+F L
Sbjct: 334 VHKPREMDTSRRKFHL 349
>gi|328772823|gb|EGF82861.1| hypothetical protein BATDEDRAFT_9487 [Batrachochytrium
dendrobatidis JAM81]
Length = 296
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 208/357 (58%), Gaps = 68/357 (19%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRAL---ELGEEPPARMTPRTIEN 94
PS I+NK KR V KLK +K R KLK R +K +L +E + P+T+E
Sbjct: 4 PSRIRNKIKRGEVFHKLKSEKS---RNKLKTRLKQKKEEASNPQLKKERLEQNVPQTLET 60
Query: 95 TREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
RE DET+ D+E++A DEFSS K G PKIL+TT R S F + +S+
Sbjct: 61 LREEDETLVE-QDEEVYA----DEFSSYFKDGLPPKILVTTNRRPSASVYEFAEQFVSIF 115
Query: 155 PNSHYYKRGT-YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKL 213
P++ + KRG+ +++KKI+E A ++ +T ++V++ +R++P+A+ +I LPDGPTAHFKL+ +
Sbjct: 116 PDAEFVKRGSQFEIKKIVEIAIERSYTDLVVINEDRKKPNAITLIHLPDGPTAHFKLTSV 175
Query: 214 VLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
L K I+ HG + PEL+LNNF TRLGH +GR+ S+FP PEF GR+V T HNQRDF
Sbjct: 176 KLPKFIRGHGKADDYKPELILNNFNTRLGHTIGRMFASMFPHVPEFVGRQVATLHNQRDF 235
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFR H RYIF NG++
Sbjct: 236 IFFRRH--------------------------------RYIFR---------NGERCD-- 252
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+QE GPRFTLKL+SLQ GTFDTK GE+EW+HKPE+DTSRR+F L
Sbjct: 253 -------------IQELGPRFTLKLMSLQKGTFDTKFGEYEWLHKPELDTSRRKFHL 296
>gi|387849258|ref|NP_001248500.1| ribosome production factor 1 [Macaca mulatta]
gi|355569284|gb|EHH25395.1| hypothetical protein EGK_21569 [Macaca mulatta]
gi|355745410|gb|EHH50035.1| hypothetical protein EGM_00796 [Macaca fascicularis]
gi|380816714|gb|AFE80231.1| ribosome production factor 1 [Macaca mulatta]
gi|383421755|gb|AFH34091.1| ribosome production factor 1 [Macaca mulatta]
gi|384949528|gb|AFI38369.1| ribosome production factor 1 [Macaca mulatta]
Length = 349
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 159/386 (41%), Positives = 215/386 (55%), Gaps = 66/386 (17%)
Query: 12 ELLNEGEKENDKNNENISKKMKKEILP-----SMIKNKEKRSAVHAKLKHQKKVEKRKKL 66
E + E D E+ + K P S IKNK++R + + K Q ++++KL
Sbjct: 23 EEIQEAAGAGDGATESGVQPPKAAAFPPGFSISEIKNKQRRHLMFTRWKQQ---QRKEKL 79
Query: 67 KARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQG 126
A+ +K LG++ P + P+TI+N R DET P+D+E+ DEF+S +
Sbjct: 80 AAKKKLKKEREALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDESTDEFASYFNKQ 139
Query: 127 CAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVH 186
+PKILITT R +L +VIPNSH Y R LKKII ++FT +IV++
Sbjct: 140 TSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCIAREFTDLIVIN 199
Query: 187 TNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRV 245
+R+ P+ L++ LP+GPTAHFK+S + LRK+IK G +PT HIPE++LNNF TRLGH +
Sbjct: 200 EDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSI 259
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKA 305
GR+ SLFP +P+F GR+V TFHNQRD+IFFR H
Sbjct: 260 GRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFH-------------------------- 293
Query: 306 FCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT 365
RYIF +++ G +QE GPRFTLKL SLQ GT
Sbjct: 294 ------RYIFRSEKKVG------------------------IQELGPRFTLKLRSLQKGT 323
Query: 366 FDTKGGEFEWVHKP-EMDTSRRRFFL 390
FD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 324 FDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|213512514|ref|NP_001094264.1| ribosome production factor 1 [Rattus norvegicus]
Length = 349
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 205/354 (57%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q++ EK K E+ AL G++ P + P+TI+N R
Sbjct: 55 SEIKNKQRRHLMFTRWKQQQRKEKLAAKKKL-KREREAL--GDKAPPKPVPKTIDNQRVY 111
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P+D+E+ DEF+S + +PKILITT R +L +VIP+SH
Sbjct: 112 DETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSH 171
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+
Sbjct: 172 VYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKE 231
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G +PT H+PE++LNNF TRLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR
Sbjct: 232 IKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFR 291
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF++++ G
Sbjct: 292 FH--------------------------------RYIFKSEKKVG--------------- 304
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 305 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|426215862|ref|XP_004002188.1| PREDICTED: ribosome production factor 1 [Ovis aries]
Length = 349
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 154/354 (43%), Positives = 207/354 (58%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q ++++KL A+ +K LG++ P + P+TI+N R
Sbjct: 55 SEIKNKQRRHLMFTRWKQQ---QRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVY 111
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET+ P+D+E+ DEF+S + +PKILITT R +L +VIPNSH
Sbjct: 112 DETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSH 171
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKKII +DFT +IV++ +R+ P+ L++ LP GPTAHFK+S + LRK+
Sbjct: 172 VYYRRGLALKKIIPQCISRDFTDLIVINEDRKIPNGLILSHLPSGPTAHFKMSSVRLRKE 231
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR
Sbjct: 232 IKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFR 291
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF++++ G
Sbjct: 292 FH--------------------------------RYIFKSEKKVG--------------- 304
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 305 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|403257648|ref|XP_003921414.1| PREDICTED: ribosome production factor 1 [Saimiri boliviensis
boliviensis]
Length = 350
Score = 263 bits (673), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 216/392 (55%), Gaps = 66/392 (16%)
Query: 6 KKSEGEELLNEGEKENDKNNENISKKMKKEILP-----SMIKNKEKRSAVHAKLKHQKKV 60
K+ E L E D E+ + K P S IKNK++R + + K Q
Sbjct: 18 KRKAAAEELQEATFAGDGATESGGQPPKAVAFPPGFSISEIKNKQRRHLMFTRWKQQ--- 74
Query: 61 EKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFS 120
++++KL A+ +K LG++ P + P+TI+N R DET P+D+E+ DEF+
Sbjct: 75 QRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEATDEFA 134
Query: 121 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 180
S + +PKILITT R +L +VIPNSH Y R LKKII +DFT
Sbjct: 135 SYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCITRDFT 194
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLNNFAT 239
+IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+IK G +PT HIPE++LNNF T
Sbjct: 195 DLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTT 254
Query: 240 RLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYL 299
LGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR H
Sbjct: 255 WLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFH-------------------- 294
Query: 300 TSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 359
RYIF +++ G +QE GPRFTLKL
Sbjct: 295 ------------RYIFRSEKKVG------------------------IQELGPRFTLKLR 318
Query: 360 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 319 SLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 350
>gi|187469108|gb|AAI66888.1| Bxdc5 protein [Rattus norvegicus]
gi|187469251|gb|AAI66920.1| Bxdc5 protein [Rattus norvegicus]
Length = 348
Score = 263 bits (673), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 204/354 (57%), Gaps = 62/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q+K + K K + E LG++ P + P+TI+N R
Sbjct: 55 SEIKNKQRRHLMFTRWKQQRKEKLAAKKKLKREREA----LGDKAPPKPVPKTIDNQRVY 110
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P+D+E+ DEF+S + +PKILITT R +L +VIP+SH
Sbjct: 111 DETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSH 170
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+
Sbjct: 171 VYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKE 230
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G +PT H+PE++LNNF TRLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR
Sbjct: 231 IKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFR 290
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF++++ G
Sbjct: 291 FH--------------------------------RYIFKSEKKVG--------------- 303
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 304 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 348
>gi|145275210|ref|NP_079341.2| ribosome production factor 1 [Homo sapiens]
gi|114557449|ref|XP_524755.2| PREDICTED: ribosome production factor 1 isoform 2 [Pan troglodytes]
gi|397467230|ref|XP_003805327.1| PREDICTED: ribosome production factor 1 [Pan paniscus]
gi|71153718|sp|Q9H9Y2.2|RPF1_HUMAN RecName: Full=Ribosome production factor 1; AltName: Full=Brix
domain-containing protein 5; AltName: Full=Ribosome
biogenesis protein RPF1
gi|17225079|gb|AAL37236.1| RNA processing factor 1 [Homo sapiens]
gi|410222914|gb|JAA08676.1| ribosome production factor 1 homolog [Pan troglodytes]
gi|410249698|gb|JAA12816.1| ribosome production factor 1 homolog [Pan troglodytes]
gi|410288776|gb|JAA22988.1| ribosome production factor 1 homolog [Pan troglodytes]
Length = 349
Score = 263 bits (673), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 212/376 (56%), Gaps = 66/376 (17%)
Query: 22 DKNNENISKKMKKEILP-----SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRA 76
D EN + K P S IKNK++R + + K Q ++++KL A+ +K
Sbjct: 33 DGATENGVQPPKAAAFPPGFSISEIKNKQRRHLMFTRWKQQ---QRKEKLAAKKKLKKER 89
Query: 77 LELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTC 136
LG++ P + P+TI+N R DET P+D+E+ DEF+S + +PKILITT
Sbjct: 90 EALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTS 149
Query: 137 RFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALL 196
R +L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L+
Sbjct: 150 DRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLI 209
Query: 197 IIGLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQ 255
+ LP+GPTAHFK+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP
Sbjct: 210 LSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPH 269
Query: 256 SPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIF 315
+P+F GR+V TFHNQRD+IFFR H RYIF
Sbjct: 270 NPQFIGRQVATFHNQRDYIFFRFH--------------------------------RYIF 297
Query: 316 ETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 375
+++ G +QE GPRFTLKL SLQ GTFD+K GE+EW
Sbjct: 298 RSEKKVG------------------------IQELGPRFTLKLRSLQKGTFDSKYGEYEW 333
Query: 376 VHKP-EMDTSRRRFFL 390
VHKP EMDTSRR+F L
Sbjct: 334 VHKPREMDTSRRKFHL 349
>gi|348586184|ref|XP_003478849.1| PREDICTED: ribosome production factor 1-like [Cavia porcellus]
Length = 349
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 204/358 (56%), Gaps = 69/358 (19%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKA----RDAAEKRALELGEEPPARMTPRTIEN 94
S IKNK++R + + K Q++ EK K RDA LG++ P + P+TI+N
Sbjct: 55 SEIKNKQRRHLMFTRWKQQQRKEKLAAKKKLKKERDA-------LGDKAPPKPIPKTIDN 107
Query: 95 TREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
R DET P+D+E+ DEF+ + +PKILITT R +L +VI
Sbjct: 108 QRVYDETTVDPNDEEVAYDEATDEFAPYFNRETSPKILITTSDRPHGRTVKLCQQLSTVI 167
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
PNSH Y R LKKII +DFT ++V++ +R+ P+ L++ LP+GPTAHFK+S +
Sbjct: 168 PNSHVYYRRGLALKKIIPQCISRDFTDLMVINEDRKTPNGLILSHLPNGPTAHFKMSSVR 227
Query: 215 LRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V TFHNQRD+
Sbjct: 228 LRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDY 287
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFR H RYIF++++ G
Sbjct: 288 IFFRFH--------------------------------RYIFKSEKKVG----------- 304
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 305 -------------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|335308340|ref|XP_003361191.1| PREDICTED: ribosome production factor 1-like [Sus scrofa]
Length = 349
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 206/354 (58%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q ++++KL A+ +K LG++ P + P+TI+N R
Sbjct: 55 SEIKNKQRRHLMFTRWKQQ---QRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVY 111
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET+ P+D+E+ DEF+S + PKILITT R +L +VIPNSH
Sbjct: 112 DETIVDPNDEEVAYDEATDEFASYFNRQTCPKILITTSDRPHGRTVRLCEQLSTVIPNSH 171
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+
Sbjct: 172 VYYRRGLALKKIIPQCISRDFTDLIVINEDRKIPNGLILSHLPNGPTAHFKMSSVRLRKE 231
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G +PT H PE++LNNF TRLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR
Sbjct: 232 IKRRGKDPTEHTPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFR 291
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF++++ G
Sbjct: 292 FH--------------------------------RYIFKSEKKVG--------------- 304
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 305 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|169790907|ref|NP_081647.2| ribosome production factor 1 isoform 2 [Mus musculus]
gi|71153719|sp|Q7TND5.2|RPF1_MOUSE RecName: Full=Ribosome production factor 1; AltName: Full=Brix
domain-containing protein 5; AltName: Full=Ribosome
biogenesis protein RPF1
gi|148680021|gb|EDL11968.1| brix domain containing 5, isoform CRA_a [Mus musculus]
Length = 349
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 207/354 (58%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q ++++KL A+ +K LG++ P + P+TI+N R
Sbjct: 55 SEIKNKQRRHLMFTRWKQQ---QRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVY 111
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P+D+E+ DEF+S + +PKILITT R +L +VIP+SH
Sbjct: 112 DETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSH 171
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+
Sbjct: 172 VYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKE 231
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G +PT H+PE++LNNF TRLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR
Sbjct: 232 IKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFR 291
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF++++ G
Sbjct: 292 FH--------------------------------RYIFKSEKKVG--------------- 304
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 305 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|443711406|gb|ELU05194.1| hypothetical protein CAPTEDRAFT_20161 [Capitella teleta]
Length = 323
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/374 (40%), Positives = 214/374 (57%), Gaps = 64/374 (17%)
Query: 20 ENDKNNENISKKMKKEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALEL 79
E D+ E +++ E S+IKNK++R+ + ++K +K K+K D +R
Sbjct: 11 EEDEPQEKLAEVKLPERDISLIKNKKRRAELFKQMKREKN-----KVKKADRLRRRREAE 65
Query: 80 --GEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCR 137
G++ P + P+TIEN R D T+ +D+E+ ADE ++ + PKI+ITT
Sbjct: 66 ELGDDAPPKQVPKTIENMRVKDVTMVPMEDEEVALDEGADEMATYFNRETTPKIMITTSV 125
Query: 138 FNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLI 197
+ F+ EL+ VIPNS R ++LKKII A +K FT I+VV+ + +EP+ L++
Sbjct: 126 RIRKKTGEFVRELVKVIPNSTLVNRRGFELKKIIPSAIEKGFTDIMVVNDDNKEPNGLVL 185
Query: 198 IGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSP 257
LPDGPTAHFK+S + L +++K G + H+PE++LNNF+TRLGH +GR++ S+FP P
Sbjct: 186 CHLPDGPTAHFKISNVRLSRNLKRVGKKSDHMPEVILNNFSTRLGHTIGRILASVFPHDP 245
Query: 258 EFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFET 317
+F+GRRVVTFHNQRD+IFFRHH RY F+
Sbjct: 246 QFQGRRVVTFHNQRDYIFFRHH--------------------------------RYQFKG 273
Query: 318 KESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH 377
KE G LQE GPRFTLKL +LQ GTFD+K GEFEW+H
Sbjct: 274 KEKCG------------------------LQELGPRFTLKLRTLQKGTFDSKFGEFEWIH 309
Query: 378 K-PEMDTSRRRFFL 390
K EMD+SRR+FFL
Sbjct: 310 KRHEMDSSRRKFFL 323
>gi|74222733|dbj|BAE42233.1| unnamed protein product [Mus musculus]
Length = 349
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 156/377 (41%), Positives = 214/377 (56%), Gaps = 66/377 (17%)
Query: 21 NDKNNENISKKMKKEILP-----SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKR 75
+D E+ + K + P S IKNK++R + + K Q ++++KL A+ +K
Sbjct: 32 SDGTAESGVQPAKAAVFPPGFSISEIKNKQRRHLMFTRWKQQ---QRKEKLAAKKKLKKE 88
Query: 76 ALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITT 135
LG++ P + P+TI+N R DET P+D+E+ DEF+S + +PKILITT
Sbjct: 89 REALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITT 148
Query: 136 CRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDAL 195
R +L +VIP+SH Y R LKKII +DFT +IV++ +R+ P+ L
Sbjct: 149 SDRPHGRTVRLCEQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGL 208
Query: 196 LIIGLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFP 254
++ LP+GPTAHFK+S + LRK+IK G +PT H+PE++LNNF TRLGH +GR+ SLFP
Sbjct: 209 ILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFP 268
Query: 255 QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYI 314
+P+F GR+V TFHNQRD+IFFR H RYI
Sbjct: 269 HNPQFIGRQVATFHNQRDYIFFRFH--------------------------------RYI 296
Query: 315 FETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE 374
F+ ++ G +QE GPRFTLKL SLQ GTFD+K GE+E
Sbjct: 297 FKGEKKVG------------------------IQELGPRFTLKLRSLQKGTFDSKYGEYE 332
Query: 375 WVHKP-EMDTSRRRFFL 390
WVHKP EMDTSRR+F L
Sbjct: 333 WVHKPREMDTSRRKFHL 349
>gi|427788153|gb|JAA59528.1| Putative ribosome bioproteinsis protein rpf1 [Rhipicephalus
pulchellus]
Length = 310
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 200/353 (56%), Gaps = 60/353 (16%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + KLK K+ KR+ K R K A LGE P + PRTIENTREP
Sbjct: 17 SQIKNKKRRLEEYLKLKRAKQKLKRQAQKKR---RKEAEALGENAPPKQEPRTIENTREP 73
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
D+T+ + DD+E+ DE ++ ++ PK+LITT R F EL IPN+
Sbjct: 74 DDTMVQADDEEVQLDEAMDEMAAYFRKEYVPKLLITTSDNPHTRTIKFCRELKQSIPNAD 133
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
+ R +KK +E+A ++ ++ I V++ +RR P+ LL+ LPDGPTA+F++S + KD
Sbjct: 134 FRWRNRSRIKKTVEHAIERGYSDIAVINEDRRHPNGLLLTHLPDGPTAYFRISNVKFCKD 193
Query: 219 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
IK + H PE++LNNF TRLGH V R++ SLF P+F+GRRVVTFHNQRD+IFFRH
Sbjct: 194 IKGRAAYSAHRPEVILNNFNTRLGHSVARMLASLFHYDPQFQGRRVVTFHNQRDYIFFRH 253
Query: 279 HRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKT 338
HR YE R +EK
Sbjct: 254 HR----------------------------YEFR---------------------NAEKV 264
Query: 339 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
S +QE GPRFTL+L SLQ GTFD+K GE+EWV K EM+TSRRRFFL
Sbjct: 265 S-------IQEIGPRFTLRLKSLQKGTFDSKFGEYEWVLKRHEMETSRRRFFL 310
>gi|156392407|ref|XP_001636040.1| predicted protein [Nematostella vectensis]
gi|156223139|gb|EDO43977.1| predicted protein [Nematostella vectensis]
Length = 283
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 139/314 (44%), Positives = 184/314 (58%), Gaps = 57/314 (18%)
Query: 78 ELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCR 137
ELG+E P + PRTIENTR DET+ P D+E+ DE S K+ PK+LIT+
Sbjct: 26 ELGDEAPPKQVPRTIENTRVQDETMVDPLDEEVLQDESTDELSYYFKREVTPKVLITSSD 85
Query: 138 FNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLI 197
+ F+ EL VIPNS +R DLKKII A+ K +T++I+++ + ++P+++++
Sbjct: 86 RPKHPTVQFMEELCRVIPNSEVRQRKGRDLKKIIPQAQAKGYTAMIIINEDHKKPNSIVV 145
Query: 198 IGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSP 257
+PDGPTAHFKLS + L K+I+ HG T H PEL+LNNF TRLGH V R++ +LFP P
Sbjct: 146 THIPDGPTAHFKLSSVRLPKEIRGHGKMTSHKPELILNNFNTRLGHSVARVLAALFPYDP 205
Query: 258 EFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFET 317
+F+GR+ VTFHNQRDF+FFR H RYIF+
Sbjct: 206 QFKGRQCVTFHNQRDFVFFRRH--------------------------------RYIFKN 233
Query: 318 KESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH 377
+ G LQE GPRFTLKL S+Q GTFD+K GE+EW+H
Sbjct: 234 AKRVG------------------------LQELGPRFTLKLRSIQRGTFDSKFGEYEWIH 269
Query: 378 K-PEMDTSRRRFFL 390
K EMDTSRR+FFL
Sbjct: 270 KRKEMDTSRRKFFL 283
>gi|224057624|ref|XP_002187249.1| PREDICTED: ribosome production factor 1 [Taeniopygia guttata]
Length = 325
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 201/354 (56%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q++ EK K E+ AL G++ P + P+TIEN R
Sbjct: 31 SEIKNKQRRHFMFLRWKQQQRKEKLALKKK-RRKEREAL--GDKAPPKAVPKTIENQRVY 87
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P+D+E+ DEF+ + PKILITT R F +L +VIPNSH
Sbjct: 88 DETTVDPNDEEVAFDEATDEFAPYFNRQTVPKILITTSDRPRGRTVRFCEQLATVIPNSH 147
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LK+II +DFT +IV++ +R+ P+ L++ LPDGPTAHF++S + LRK+
Sbjct: 148 VYYRRGLALKRIIPQCIARDFTDLIVINEDRKIPNGLVLSHLPDGPTAHFRMSSVRLRKE 207
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G PT H+PE++LNNF TRLGH +GR+ +LFP P+F GR+V TFHNQRD+IFFR
Sbjct: 208 IKRKGKEPTEHVPEVILNNFTTRLGHSIGRMFAALFPHDPQFIGRQVATFHNQRDYIFFR 267
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF++++ G
Sbjct: 268 FH--------------------------------RYIFKSEKKVG--------------- 280
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EW+HK EMDTSRRRF L
Sbjct: 281 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWIHKRREMDTSRRRFHL 325
>gi|402855072|ref|XP_003892165.1| PREDICTED: ribosome production factor 1 [Papio anubis]
Length = 341
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 157/386 (40%), Positives = 207/386 (53%), Gaps = 74/386 (19%)
Query: 12 ELLNEGEKENDKNNENISKKMKKEILP-----SMIKNKEKRSAVHAKLKHQKKVEKRKKL 66
E + E D E+ + K P S IKNK++R + + K Q+
Sbjct: 23 EEIQEAAGAGDGATESEVQPPKAAAFPPGFSISEIKNKQRRHLMFTRWKQQQ-------- 74
Query: 67 KARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQG 126
R E R L PP + P+TI+N R DET P+D+E+ DEF+S +
Sbjct: 75 --RKVREGRELPGACAPP-KPIPKTIDNQRVYDETTVDPNDEEVAYDESTDEFASYFNKQ 131
Query: 127 CAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVH 186
+PKILITT R +L +VIPNSH Y R LKKII ++FT +IV++
Sbjct: 132 TSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCIAREFTDLIVIN 191
Query: 187 TNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRV 245
+R+ P+ L++ LP+GPTAHFK+S + LRK+IK G +PT HIPE++LNNF T+LGH +
Sbjct: 192 EDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTQLGHSI 251
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKA 305
GR+ SLFP +P+F GR+V TFHNQRD+IFFR H
Sbjct: 252 GRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFH-------------------------- 285
Query: 306 FCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT 365
RYIF +++ G +QE GPRFTLKL SLQ GT
Sbjct: 286 ------RYIFRSEKKVG------------------------IQELGPRFTLKLRSLQKGT 315
Query: 366 FDTKGGEFEWVHKP-EMDTSRRRFFL 390
FD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 316 FDSKYGEYEWVHKPREMDTSRRKFHL 341
>gi|344278966|ref|XP_003411262.1| PREDICTED: ribosome production factor 1-like [Loxodonta africana]
Length = 348
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 205/354 (57%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q ++++KL A+ +K LG++ P + P+TI+N R
Sbjct: 54 SEIKNKQRRHLMFTRWKQQ---QRKEKLAAKKKLKKEREALGDKAPPKPIPKTIDNQRVY 110
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET+ P+D+E+ DEF+S + +PKILITT R +L +VIPNSH
Sbjct: 111 DETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSH 170
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKKII +DFT +IV++ +R+ P+ L++ LP GPTAHFK+S + LRK+
Sbjct: 171 VYYRRGLALKKIIPQCISRDFTDLIVINEDRKIPNGLILSHLPHGPTAHFKMSSVRLRKE 230
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G +PT H PE++LNNF TRLGH +GR+ SLFP P+F GR+V TFHNQRD+IFFR
Sbjct: 231 IKRRGKDPTEHKPEVILNNFTTRLGHSIGRMFASLFPHDPQFIGRQVATFHNQRDYIFFR 290
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF++++ G
Sbjct: 291 FH--------------------------------RYIFKSEKKVG--------------- 303
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 304 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 348
>gi|299471886|emb|CBN77056.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 307
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/351 (42%), Positives = 199/351 (56%), Gaps = 52/351 (14%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I NK KR+ ++ K K KK E++ + + R+ A ELGEE P + P+T+E+TR+PD
Sbjct: 8 IGNKAKRTELYRKQKGNKKAEQKDRRRRRERE---AQELGEEAPPKQKPKTLESTRDPDR 64
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
TV +P DDE+F DEF+ PKI+ITT S F+ +L+ +IPN+ +Y
Sbjct: 65 TVVKPADDEVFRDEAEDEFARFFSNEQTPKIMITTRPRPSGNLFHFVQDLMRMIPNAFFY 124
Query: 161 KRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 220
R ++ +K+I ++A K FT + V+ + + L++ LP GPTA FK+S ++ ++
Sbjct: 125 PRKSFTVKQICQWADNKKFTHLFVISERLKICNGLIVSVLPHGPTAFFKVSNVIPSTEVF 184
Query: 221 NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHR 280
NHG T H PE++LNNF TRLGHRVGR + S FP PEF GR+VVTFHNQRD+IF R H
Sbjct: 185 NHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFFPHEPEFNGRQVVTFHNQRDYIFVRFH- 243
Query: 281 CVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQ 340
RYIF A GK D K
Sbjct: 244 -------------------------------RYIF---------AEGKGEGDTK------ 257
Query: 341 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
K RLQE GPRFTLK+ LQ GTFDT+ GE+EW+HK EMD++RR F L
Sbjct: 258 -KTRARLQELGPRFTLKMRWLQEGTFDTQYGEYEWIHKRKEMDSTRRTFHL 307
>gi|405977744|gb|EKC42178.1| Ribosome production factor 1 [Crassostrea gigas]
Length = 325
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 165/376 (43%), Positives = 212/376 (56%), Gaps = 65/376 (17%)
Query: 18 EKENDKN-NENISKKMKKEILPSMIKNKEKRSAVHAKLKHQKKVEKRK-KLKARDAAEKR 75
E+EN K+ E++ K I S IKNK R+ ++ KL+ VEKRK KLK + +K
Sbjct: 12 EEENQKDLTEDVQTIPKPNI--SRIKNKILRNEMYKKLR----VEKRKAKLKEKQRKKKE 65
Query: 76 ALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITT 135
A +GEE P + P+TIE+ R DET+ +D E+ DE ++ + +P+ILITT
Sbjct: 66 AESMGEEAPPKQVPKTIESMRVKDETMVNTEDTEVMLDEAQDELATYFNRETSPQILITT 125
Query: 136 CRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDAL 195
C R F EL IPNS R DLKKII AK++ +T II+V+ +R+EP+ L
Sbjct: 126 CDRPCLRTNKFCKELKLTIPNSEIKYRRGLDLKKIIPQAKERGYTDIIIVNEDRKEPNGL 185
Query: 196 LIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQ 255
+I LP+GPT HFKLS + L +IK G + H PEL+LNNF TRLGH VGR+ SLFP
Sbjct: 186 VITHLPEGPTLHFKLSSVRLTTEIKRVGEMSKHKPELILNNFGTRLGHSVGRVFASLFPH 245
Query: 256 SPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIF 315
P+F+GRRVVTFHNQRDFIFFRHH RY+F
Sbjct: 246 DPQFQGRRVVTFHNQRDFIFFRHH--------------------------------RYVF 273
Query: 316 ETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 375
+ G L++ GPRFTLKL SLQ GTFD+K GE+EW
Sbjct: 274 RNNKRVG------------------------LKDLGPRFTLKLRSLQKGTFDSKYGEYEW 309
Query: 376 VHK-PEMDTSRRRFFL 390
VHK EM+TSRR+F L
Sbjct: 310 VHKRKEMETSRRKFSL 325
>gi|363736721|ref|XP_422376.3| PREDICTED: ribosome production factor 1 [Gallus gallus]
Length = 340
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 202/354 (57%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q++ EK K R E+ AL G++ P + P+TIEN R
Sbjct: 46 SEIKNKQRRHFMFLRWKQQQRKEKLALKKKR-RKEREAL--GDKAPPKAIPKTIENQRIY 102
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P+D+E+ DEF+ + PKILITT R F +L +VIPNSH
Sbjct: 103 DETTVDPNDEEVAFDIATDEFAPYFNRQTVPKILITTSDRPRGRTVRFCEQLSTVIPNSH 162
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LK+II +DFT +IV++ +R+ P+ L++ LPDGPTAHF++S + LRK+
Sbjct: 163 VYYRRGLALKRIIPQCIARDFTDLIVINEDRKIPNGLVLSHLPDGPTAHFRMSSVRLRKE 222
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G PT H+PE++LNNF TRLGH +GR+ SLFP P+F GR+V TFHNQRD+IFFR
Sbjct: 223 IKRKGKEPTEHVPEVILNNFTTRLGHSIGRMFASLFPHDPQFIGRQVATFHNQRDYIFFR 282
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF++++ G
Sbjct: 283 FH--------------------------------RYIFKSEKKVG--------------- 295
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EW+HK EMDTSRR+F L
Sbjct: 296 ---------IQELGPRFTLKLRSLQKGTFDSKFGEYEWIHKRREMDTSRRKFHL 340
>gi|126306176|ref|XP_001367212.1| PREDICTED: ribosome production factor 1-like [Monodelphis
domestica]
Length = 349
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 205/354 (57%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q ++++KL A+ +K LG++ P + P+TIEN R
Sbjct: 55 SEIKNKQRRHFMFVRWKQQ---QRKEKLAAKKKLKKEREALGDKAPPKPVPKTIENQRVY 111
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET+ P+D+E+ DEF+S + +PKILITT R F +L +VIPNSH
Sbjct: 112 DETIVDPNDEEVAYDEATDEFASHFNRQTSPKILITTSDRPRGRTVRFCEQLSTVIPNSH 171
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LK+II +DFT +IV++ +R+ P+ L++ LP GPTAHF++S + LRK+
Sbjct: 172 VYYRRGLALKRIIPQCISRDFTDLIVINEDRKIPNGLVLSHLPHGPTAHFRMSSVRLRKE 231
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G PT H PE++LNNF TRLGH +GR+ SLFP P+F GR+V TFHNQRD+IFFR
Sbjct: 232 IKRKGKEPTQHSPEVILNNFTTRLGHSIGRMFASLFPHDPQFIGRQVATFHNQRDYIFFR 291
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RY+F++++ G
Sbjct: 292 FH--------------------------------RYLFKSEKKVG--------------- 304
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 305 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|284009752|ref|NP_001165011.1| ribosome production factor 1 homolog [Xenopus (Silurana)
tropicalis]
gi|89272523|emb|CAJ83459.1| brix domain containing 5 [Xenopus (Silurana) tropicalis]
gi|110645366|gb|AAI18765.1| Unknown (protein for MGC:145697) [Xenopus (Silurana) tropicalis]
Length = 342
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 200/354 (56%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + +LK +K+ K K + ++RA LG++ P + P+TIEN R
Sbjct: 48 SEIKNKQRRQFMFMRLKQEKR--KEKLALRKKRKKERAA-LGDKAPPKPVPKTIENQRVY 104
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P D+E+ DEF+ + PKILITT R F +L SVIPNS
Sbjct: 105 DETTVDPADEEVALDEAIDEFAPYFNKQTTPKILITTSDRPRGRTVRFTEQLSSVIPNSD 164
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKK+I +D+T +I+++ +R+ P+ L+ LPDGPTAHFK+S + LRK+
Sbjct: 165 VYYRRGLALKKVIPQCISRDYTDLIIINEDRKVPNGLVFCHLPDGPTAHFKMSNVRLRKE 224
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
+K G PT H PE++LNNF TRLGH +GR+ SL+P P+F GR+V TFHNQRD+IFFR
Sbjct: 225 MKRKGKEPTEHKPEVILNNFTTRLGHSIGRMFASLYPHDPQFTGRQVATFHNQRDYIFFR 284
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
+H RYIF++++ G
Sbjct: 285 YH--------------------------------RYIFKSEKKVG--------------- 297
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHK EMDTSRR+F L
Sbjct: 298 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKRHEMDTSRRKFHL 342
>gi|225711962|gb|ACO11827.1| Ribosome production factor 1 [Lepeophtheirus salmonis]
Length = 359
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 152/373 (40%), Positives = 207/373 (55%), Gaps = 74/373 (19%)
Query: 33 KKEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTI 92
K+ I S +KNK +R + KLK KK E++K+ +D +K + LGEE P ++ PRTI
Sbjct: 46 KQAIRLSGMKNKLRRVEAYKKLKRLKKAERKKR---QDERKKESEALGEEAPPKLVPRTI 102
Query: 93 ENTREPDETVCRPDDDELFAGND-----------ADEFSSILKQGCAPKILITTCRFNSN 141
ENTRE DET + E ND DEF + + PK++IT+
Sbjct: 103 ENTREYDETTVKDTPTEETTTNDDENAEVQWDILNDEFKTYFDKSYVPKVIITSGDNPHT 162
Query: 142 RGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLP 201
R F+ EL +IPN+ + R +KK+IE K++ +T ++V++ N R+P+ +++ LP
Sbjct: 163 RTITFMKELSRMIPNAELFWRNRSAMKKMIEDGKERGYTDVVVINENNRKPNGMVVSHLP 222
Query: 202 DGPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR 260
DGPTAHFKLS + K++K N N T H PE++LNNF TRLGH +GR++ SLF PEFR
Sbjct: 223 DGPTAHFKLSNVKATKEMKKNWRNITSHRPEVILNNFTTRLGHSIGRMLASLFHYEPEFR 282
Query: 261 GRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKES 320
G+R VTFHNQRD++FFRHHR YE +
Sbjct: 283 GQRAVTFHNQRDYMFFRHHR----------------------------YEFK-------- 306
Query: 321 KGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV---H 377
N +K K L+E GPRFTLKL SLQ GTFD+K GE+EW+
Sbjct: 307 -----NSEKVK---------------LKELGPRFTLKLRSLQKGTFDSKLGEYEWMITGR 346
Query: 378 KPEMDTSRRRFFL 390
+ EM+TSRRRFFL
Sbjct: 347 RHEMETSRRRFFL 359
>gi|354485437|ref|XP_003504890.1| PREDICTED: ribosome production factor 1-like [Cricetulus griseus]
Length = 446
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 184/314 (58%), Gaps = 58/314 (18%)
Query: 79 LGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRF 138
LG++ P + P+TI+N R DET P D+E+ DEF+S + +PKILITT
Sbjct: 189 LGDKAPPKPVPKTIDNQRVYDETTVDPTDEEVAYDEATDEFASYFNRQTSPKILITTSDR 248
Query: 139 NSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLII 198
R +L +VIP+SH Y R LKKII +DFT +IV++ +R+ P+ L++
Sbjct: 249 PHGRTVRLCEQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILS 308
Query: 199 GLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSP 257
LP+GPTAHFK+S + LRK+IK G +PT H+PE++LNNF TRLGH +GR+ SLFP +P
Sbjct: 309 HLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNP 368
Query: 258 EFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFET 317
+F GR+V TFHNQRD+IFFR H RYIF++
Sbjct: 369 QFIGRQVATFHNQRDYIFFRFH--------------------------------RYIFKS 396
Query: 318 KESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH 377
++ G +QE GPRFTLKL SLQ GTFD+K GE+EWVH
Sbjct: 397 EKKVG------------------------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVH 432
Query: 378 KP-EMDTSRRRFFL 390
KP EMDTSRR+F L
Sbjct: 433 KPREMDTSRRKFHL 446
>gi|346470829|gb|AEO35259.1| hypothetical protein [Amblyomma maculatum]
Length = 310
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 199/353 (56%), Gaps = 60/353 (16%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + KLK K+ KR+ + R K A LGE P + PRTIENTREP
Sbjct: 17 SQIKNKQRRLEEYLKLKRAKQKIKRQAQRKR---RKEAEALGENAPPKQVPRTIENTREP 73
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
D+T+ + DD+E+ DE ++ K+ PK+LITT R F E+ IPN+
Sbjct: 74 DDTMVQQDDEEVQLDEAMDEMAAYFKKEYIPKLLITTSDNPHTRTIRFCREIKQSIPNAD 133
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
+ R +KK +E A ++ ++ I V++ +RR P+ LL+ LPDGPTA+F++S + KD
Sbjct: 134 FRWRNRSRIKKTVEQAIERGYSDIAVINEDRRHPNGLLLTHLPDGPTAYFRISSVKFCKD 193
Query: 219 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
IK + H PE++LNNF TRLGH V R++ SLF P+F+GRRVVTFHNQRD+IFFRH
Sbjct: 194 IKGRAAYSVHRPEVILNNFNTRLGHSVARMLASLFHYDPQFQGRRVVTFHNQRDYIFFRH 253
Query: 279 HRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKT 338
HR YE R +EK
Sbjct: 254 HR----------------------------YEFR---------------------NAEKV 264
Query: 339 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
S +QE GPRFTL+L SLQ GTFD+K GE+EWV K EM+TSRRRFFL
Sbjct: 265 S-------IQEIGPRFTLRLKSLQKGTFDSKFGEYEWVLKRHEMETSRRRFFL 310
>gi|291236446|ref|XP_002738150.1| PREDICTED: CG6712-like [Saccoglossus kowalevskii]
Length = 318
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 161/353 (45%), Positives = 199/353 (56%), Gaps = 60/353 (16%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + KLK +K+ EKR++ K +K LG+E P + P+TIENTR
Sbjct: 25 SRIKNKDRRKEEYVKLKRKKQKEKRERQKK---RKKEEEALGDEAPPKKVPKTIENTRVY 81
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET+ P D+E+ DE SS + PKILITT +R EL IPNS
Sbjct: 82 DETMVDPQDEEVRYDEATDEMSSYFDRKSLPKILITTADRPKSRTTRLCKELSDCIPNSE 141
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKKII A KDFT I+V++ +R++P+ L I LPDGPT HFK+S + L KD
Sbjct: 142 VYYRRGLALKKIIPQAIAKDFTDIVVINEDRKKPNGLYICHLPDGPTVHFKMSSVRLSKD 201
Query: 219 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
I++ + T H PE++LNNF TRLGH VGRL+ SLFP PEF+GR+ VTFHNQRD+IFFR
Sbjct: 202 IRHCSSGTEHQPEVILNNFNTRLGHSVGRLLASLFPHDPEFQGRQAVTFHNQRDYIFFRR 261
Query: 279 HRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKT 338
H RYIF + G
Sbjct: 262 H--------------------------------RYIFRNTKRVG---------------- 273
Query: 339 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
LQE GPRFTLKL SLQ GTFD+K GE+EWVHK EMDTSRR+F L
Sbjct: 274 --------LQELGPRFTLKLRSLQKGTFDSKFGEYEWVHKRHEMDTSRRKFHL 318
>gi|148226302|ref|NP_001080272.1| ribosome production factor 1 [Xenopus laevis]
gi|71153722|sp|Q8AVP1.1|RPF1_XENLA RecName: Full=Ribosome production factor 1; AltName: Full=Brix
domain-containing protein 5; AltName: Full=Ribosome
biogenesis protein RPF1
gi|27371215|gb|AAH41557.1| Rpf1-pending-prov protein [Xenopus laevis]
Length = 343
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 200/354 (56%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + KLK +K+ EK K R E+ AL G++ P + P+TIEN R
Sbjct: 49 SEIKNKQRRQFMFIKLKQEKRKEKLILRKKR-KKEREAL--GDKAPPKPVPKTIENQRVY 105
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P D+E+ DEF+ + PKILITT R F +L S+IPNS
Sbjct: 106 DETTVDPADEEVALDEATDEFAPYFNKQTTPKILITTSDRPRGRSVRFTEQLSSIIPNSD 165
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKKII +D+T ++V++ +R+ P+ L++ LPDGPTAHFK+S + LRK+
Sbjct: 166 VYYRRGLALKKIIPQCVSRDYTDLLVINEDRKVPNGLVLCHLPDGPTAHFKISNVRLRKE 225
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
+K G PT H PE++LNNF TRLGH +GR+ SL+P P F GR+V TFHNQRD+IFFR
Sbjct: 226 MKRKGKEPTEHKPEVILNNFTTRLGHSIGRMFASLYPHDPHFVGRQVATFHNQRDYIFFR 285
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
+H RY+F++++ G
Sbjct: 286 YH--------------------------------RYLFKSEKKVG--------------- 298
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHK EMDTSRR+F L
Sbjct: 299 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKRHEMDTSRRKFHL 343
>gi|412994068|emb|CCO14579.1| predicted protein [Bathycoccus prasinos]
Length = 493
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 125/252 (49%), Positives = 172/252 (68%), Gaps = 6/252 (2%)
Query: 37 LPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTR 96
L S IKNK++RS V+ KL H++ VEK+K+ + R E RALE GE P R P+TIEN R
Sbjct: 40 LTSQIKNKQRRSEVYGKLLHEQSVEKKKRRQLRQKEELRALENGETPAPRQVPKTIENQR 99
Query: 97 EPDET-VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIP 155
DET + R D++E+ + DEF+S +PKI+ITT R S F+ L +V+P
Sbjct: 100 VIDETHIVREDEEEIHNEDKEDEFASYFSFNSSPKIIITTSRKPSGAMFKFLENLFTVVP 159
Query: 156 NSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR-----EPDALLIIGLPDGPTAHFKL 210
N++YY R Y +K+++++A + FT +++ + N+ + LL + LP+GP+ +KL
Sbjct: 160 NAYYYARRNYHVKEMVKHATARGFTDLLIFNENKTFSKGARVNGLLHVHLPEGPSVMYKL 219
Query: 211 SKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQ 270
+ L+L K I+NHG T H PEL+LNNF+TRLGHR+GR+ SLFPQ PEF+GRRVVTFHNQ
Sbjct: 220 TNLILSKKIRNHGRATSHYPELLLNNFSTRLGHRIGRMFASLFPQKPEFKGRRVVTFHNQ 279
Query: 271 RDFIFFRHHRCV 282
RDFIFFRHHR V
Sbjct: 280 RDFIFFRHHRYV 291
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 38/51 (74%), Gaps = 3/51 (5%)
Query: 343 VITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTS---RRRFFL 390
VI RLQE GPRFTLKL+S+Q GTFD+K GEFE+V E D + RR+F L
Sbjct: 443 VIARLQELGPRFTLKLMSVQKGTFDSKHGEFEYVRSTETDGTRKNRRKFVL 493
>gi|133777041|gb|AAH56165.2| Brix domain containing 5 [Mus musculus]
gi|133777107|gb|AAH89369.2| Brix domain containing 5 [Mus musculus]
Length = 284
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 185/314 (58%), Gaps = 58/314 (18%)
Query: 79 LGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRF 138
LG++ P + P+TI+N R DET P+D+E+ DEF+S + +PKILITT
Sbjct: 27 LGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDR 86
Query: 139 NSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLII 198
R +L +VIP+SH Y R LKKII +DFT +IV++ +R+ P+ L++
Sbjct: 87 PHGRTVRLCEQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILS 146
Query: 199 GLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSP 257
LP+GPTAHFK+S + LRK+IK G +PT H+PE++LNNF TRLGH +GR+ SLFP +P
Sbjct: 147 HLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNP 206
Query: 258 EFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFET 317
+F GR+V TFHNQRD+IFFR H RYIF++
Sbjct: 207 QFIGRQVATFHNQRDYIFFRFH--------------------------------RYIFKS 234
Query: 318 KESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH 377
++ G +QE GPRFTLKL SLQ GTFD+K GE+EWVH
Sbjct: 235 EKKVG------------------------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVH 270
Query: 378 KP-EMDTSRRRFFL 390
KP EMDTSRR+F L
Sbjct: 271 KPREMDTSRRKFHL 284
>gi|403376069|gb|EJY88014.1| Brix domain containing protein [Oxytricha trifallax]
Length = 452
Score = 256 bits (655), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 148/368 (40%), Positives = 205/368 (55%), Gaps = 63/368 (17%)
Query: 28 ISKKMKKEI----LPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEP 83
+SKK +K+ + S IKNK KR + + QK +K++KL + +K E GEE
Sbjct: 143 LSKKQEKDKTSVRVASEIKNKSKRREI---VILQKMAQKQQKLIGKLKKQKVRAEQGEEA 199
Query: 84 PARMTPRTIENTREPDETVCRPDDDELFAG-NDADEFSSILKQGCAPKILITTCRFNSNR 142
R +TIE+ R DET+ + DDE G D DEF+ K PKIL+TT R
Sbjct: 200 MPRGVTKTIESMRVADETLIQEGDDEEIKGEQDMDEFNKYFKNETKPKILMTTNRRPKGN 259
Query: 143 GPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 202
F+ E+ +PN+ YY+R + +K+II++AK +DFT ++V + P L++ LPD
Sbjct: 260 LFDFLKEVKEAVPNTEYYERKNFRIKQIIDWAKGRDFTDVMVFYEKHGNPHTLIMSHLPD 319
Query: 203 GPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 262
GPTA F++S + LR +I +H P+ + PEL+LNNF T LGHR+GR++ +L+PQ+PEFRGR
Sbjct: 320 GPTASFRVSGVKLRAEIYHHAVPSSYNPELILNNFDTMLGHRIGRMLAALYPQNPEFRGR 379
Query: 263 RVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKG 322
RVVTFHNQRDFIFFR H RY F +
Sbjct: 380 RVVTFHNQRDFIFFRQH--------------------------------RYEFTEDHQRA 407
Query: 323 SDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMD 382
+ LQE GPRFTLKL SLQ GT DTK GEFE+++KP+M
Sbjct: 408 N-----------------------LQEIGPRFTLKLHSLQLGTLDTKFGEFEFIYKPKMG 444
Query: 383 TSRRRFFL 390
+R++FF+
Sbjct: 445 VNRKQFFM 452
>gi|348530174|ref|XP_003452586.1| PREDICTED: ribosome production factor 1-like [Oreochromis
niloticus]
Length = 349
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 199/354 (56%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + KLK +K+ ++K++ R K LG++ P + P+TIEN R
Sbjct: 55 SEIKNKQRRHFMFMKLKQEKR---KQKMQLRKKRRKEREALGDKAPPKEVPKTIENQRVY 111
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P+D+E+ DEFS+ PK+LITT R F +L +VIPN+H
Sbjct: 112 DETTVDPEDEEIAFDEGTDEFSAYFNGLTNPKVLITTSDRPRGRTVRFCEQLATVIPNAH 171
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LK+II ++FT ++V++ +R+ P+ +++ LP+GPTAHFK+S + LRK+
Sbjct: 172 VYYRRGLALKRIIPQCVARNFTYLMVINEDRQVPNGMVLCHLPNGPTAHFKVSSVRLRKE 231
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
+K G NPT H PE++LNNF TRLGH +GRL +LFPQ P F GR+V TFHNQRDFIFFR
Sbjct: 232 MKRRGKNPTEHYPEVILNNFTTRLGHTIGRLFAALFPQEPHFVGRQVATFHNQRDFIFFR 291
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF+ ++ G
Sbjct: 292 FH--------------------------------RYIFKNEKKVG--------------- 304
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWV K EM+ RR+F L
Sbjct: 305 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVMKRHEMEACRRKFQL 349
>gi|340380390|ref|XP_003388705.1| PREDICTED: ribosome production factor 1-like [Amphimedon
queenslandica]
Length = 322
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 147/353 (41%), Positives = 194/353 (54%), Gaps = 60/353 (16%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
SMIKNK R A++ + +K ++ ++K + R K +LGE P + P+T+E+TREP
Sbjct: 29 SMIKNKILRQAMY---RREKLIKLKEKREKRKKLAKEREQLGENAPPKPIPKTLESTREP 85
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
+ET DD E+ DEFS + +PKILIT+ R + EL IPNS
Sbjct: 86 EETTVLADDPEILQDEKTDEFSGYFDRKTSPKILITSFTRAHLRSNLLMRELADCIPNSD 145
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
R ++K II A ++D+T II++ NR+ P L +I LP+GPTA+FKL+ ++
Sbjct: 146 MKWRRGSEIKSIIPEAIERDYTDIIIIEENRKIPSGLWLIHLPEGPTAYFKLTNYKRGRE 205
Query: 219 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
IK HG PT H PE++LN F+T+LGH +GR+ SLFPQ P F+GRR VTFHNQRDFIFFRH
Sbjct: 206 IKGHGTPTSHYPEVILNRFSTKLGHTIGRMFASLFPQDPNFKGRRAVTFHNQRDFIFFRH 265
Query: 279 HRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKT 338
H RYIF G
Sbjct: 266 H--------------------------------RYIFRDSLRVG---------------- 277
Query: 339 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH-KPEMDTSRRRFFL 390
LQE GPRFTLKL +LQ GTFDTK G++ W+H + +MDTSRRRF L
Sbjct: 278 --------LQELGPRFTLKLRTLQKGTFDTKFGQYMWMHNRKKMDTSRRRFHL 322
>gi|318037205|ref|NP_001188154.1| ribosome production factor 1 [Ictalurus punctatus]
gi|308323466|gb|ADO28869.1| ribosome production factor 1 [Ictalurus punctatus]
Length = 350
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 151/354 (42%), Positives = 204/354 (57%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + K K Q+K +++ +L+ + E+ AL G++ P + P+TIEN R
Sbjct: 56 SEIKNKQRRRLMFMKFK-QEKRKQKLQLRKKRKKEREAL--GDKAPPKEVPKTIENQRIH 112
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P+D+E+ DEFS+ + PK+LITT R F +L +VIPN+H
Sbjct: 113 DETTVDPEDEEVAFDEGTDEFSAYFNKLINPKVLITTSDRPRGRTVRFCEQLATVIPNAH 172
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LK+II +DFT ++V++ +R+ P+ +++ LPDG TAHFK+S + LRK+
Sbjct: 173 VYYRRGLALKRIIPQCVSRDFTYLMVINEDRKVPNGMVLCHLPDGSTAHFKVSSVRLRKE 232
Query: 219 IKNHGN-PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
+K G PT H PE++LNNF TRLGH +GRL +LFPQ P+F GR+V TFHNQRDFIFFR
Sbjct: 233 MKRKGKAPTEHYPEVILNNFTTRLGHNIGRLFAALFPQDPQFVGRQVATFHNQRDFIFFR 292
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF+ ++ G
Sbjct: 293 FH--------------------------------RYIFKNEKKVG--------------- 305
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHK EMDTSRR+F L
Sbjct: 306 ---------IQELGPRFTLKLRSLQKGTFDSKFGEYEWVHKRHEMDTSRRKFHL 350
>gi|50949520|emb|CAH10671.1| hypothetical protein [Homo sapiens]
gi|50950010|emb|CAH10670.1| hypothetical protein [Homo sapiens]
Length = 256
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 182/312 (58%), Gaps = 58/312 (18%)
Query: 81 EEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNS 140
++ P + P+TI+N R DET P+D+E+ DEF+S + +PKILITT
Sbjct: 1 DKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPH 60
Query: 141 NRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGL 200
R +L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ L
Sbjct: 61 GRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHL 120
Query: 201 PDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEF 259
P+GPTAHFK+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F
Sbjct: 121 PNGPTAHFKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQF 180
Query: 260 RGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKE 319
GR+V TFHNQRD+IFFR H RYIF +++
Sbjct: 181 IGRQVATFHNQRDYIFFRFH--------------------------------RYIFRSEK 208
Query: 320 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 379
G +QE GPRFTLKL SLQ GTFD+K GE+EWVHKP
Sbjct: 209 KVG------------------------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKP 244
Query: 380 -EMDTSRRRFFL 390
EMDTSRR+F L
Sbjct: 245 REMDTSRRKFHL 256
>gi|384247111|gb|EIE20599.1| Brix-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 288
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/333 (44%), Positives = 196/333 (58%), Gaps = 51/333 (15%)
Query: 58 KKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDAD 117
K E+RK R +RA ELG E P + P+TIENTRE D T+ P+D ++ A + D
Sbjct: 7 KGAERRK----RQEEVQRAEELGVEGPKKKVPKTIENTREKDVTMIAPEDADVEADDADD 62
Query: 118 EFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKK 177
EF+S + +P +L+TT S F++E+L V+P + +YKR LKKI++YA K
Sbjct: 63 EFASYFNREQSPNVLLTTSYRPSKLMFQFLAEMLEVLPCATFYKRQGLALKKIVKYATAK 122
Query: 178 DFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNF 237
FT + V + +R++ + LL+I LP GPTAHF++S L L K+IK HG PEL+LN+F
Sbjct: 123 GFTDVAVFNEDRKQVNGLLLIHLPGGPTAHFRISSLKLSKEIKGHGRAAHMKPELILNHF 182
Query: 238 ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCS 297
TRLGHR+GR++ SLF Q P F+ R+V TFHNQRD IFFRHH
Sbjct: 183 DTRLGHRLGRMLASLFHQDPNFKSRQVATFHNQRDCIFFRHH------------------ 224
Query: 298 YLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 357
RYIFE K+ DA +V+ RLQE GPRFTLK
Sbjct: 225 --------------RYIFEEKKKGKEDA---------------PQVVARLQELGPRFTLK 255
Query: 358 LVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L SLQ GTFD+K GEFE+++K +M +RRRFF+
Sbjct: 256 LQSLQTGTFDSKEGEFEFIYKSKMHQNRRRFFI 288
>gi|327276707|ref|XP_003223109.1| PREDICTED: ribosome production factor 1-like [Anolis carolinensis]
Length = 335
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 197/354 (55%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q++ EK L + +K LG++ P + P+TIEN R
Sbjct: 41 SEIKNKQRRHFMFLRWKQQQRKEK---LAIKKKRKKERAALGDKAPPKPVPKTIENQRVY 97
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P+D+E+ DEF+ + PKILITT R F +L + IPNSH
Sbjct: 98 DETTVDPNDEEVALDEATDEFAPYFNRQTIPKILITTSDRPRGRTVRFCEQLSTCIPNSH 157
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LK +I +DFT +IV++ +R+ P+ L++ LP+GPTAHF++S + LRK+
Sbjct: 158 VYYRRGLALKNVIPQCIARDFTDMIVINEDRKIPNGLVLSHLPEGPTAHFRMSSVRLRKE 217
Query: 219 IKNHGN-PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G PT H PE++LNNF TRLGH +GR+ SLFP P+F GR+V TFHNQRD+IFFR
Sbjct: 218 IKRKGKAPTEHQPEIILNNFTTRLGHSIGRMFASLFPHDPQFIGRQVATFHNQRDYIFFR 277
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF K+EK
Sbjct: 278 FH--------------------------------RYIF------------------KNEK 287
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EW+HK EMDTSRR+F L
Sbjct: 288 R------VAIQEVGPRFTLKLRSLQKGTFDSKFGEYEWIHKRREMDTSRRKFHL 335
>gi|260823916|ref|XP_002606914.1| hypothetical protein BRAFLDRAFT_60335 [Branchiostoma floridae]
gi|229292259|gb|EEN62924.1| hypothetical protein BRAFLDRAFT_60335 [Branchiostoma floridae]
Length = 288
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/316 (44%), Positives = 177/316 (56%), Gaps = 57/316 (18%)
Query: 76 ALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITT 135
A LG+E P + P+TIEN R DET+ P D+E+ DE +S + PK+LIT+
Sbjct: 29 AEALGDEAPPKKVPKTIENMRVFDETMVDPQDEEVLHDEAHDEMASYFTRDSRPKVLITS 88
Query: 136 CRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDAL 195
+ F+ EL IPNS Y R DLKK+I A K+FT IIV++ +RR+P+ +
Sbjct: 89 SDRPRSTTTRFLKELGQCIPNSEIYYRRGLDLKKVIPQALAKEFTDIIVINEDRRKPNGM 148
Query: 196 LIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQ 255
L+ LPDGPTAHFK+S + L +IK T H PE++LNNF TRLGH VGR+ +LFP
Sbjct: 149 LLCHLPDGPTAHFKISNVKLHDEIKRAPKSTEHHPEVILNNFNTRLGHTVGRMFAALFPH 208
Query: 256 SPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIF 315
P+F GR+ VTFHNQRDFIFFRHH RY+F
Sbjct: 209 DPQFSGRQAVTFHNQRDFIFFRHH--------------------------------RYLF 236
Query: 316 ETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 375
+ + G L E GPRFTLKL SLQ GTFD+K GE+EW
Sbjct: 237 KNNKRVG------------------------LNELGPRFTLKLRSLQKGTFDSKFGEYEW 272
Query: 376 VHK-PEMDTSRRRFFL 390
VHK EMDTSRR+FFL
Sbjct: 273 VHKRHEMDTSRRKFFL 288
>gi|395530639|ref|XP_003767396.1| PREDICTED: ribosome production factor 1 [Sarcophilus harrisii]
Length = 367
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 182/314 (57%), Gaps = 58/314 (18%)
Query: 79 LGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRF 138
LG++ P + P+TIEN R DET+ P+D+E+ DEF+S + PKILITT
Sbjct: 110 LGDKAPPKPVPKTIENQRVYDETIVDPNDEEVAYDEATDEFASHFNRQTCPKILITTSDR 169
Query: 139 NSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLII 198
R F +L +VIPNSH Y R LK+II +DFT +IV++ +R+ P+ L++
Sbjct: 170 PRGRTVRFCEQLSTVIPNSHVYYRRGLALKRIIPQCISRDFTDLIVINEDRKIPNGLVLS 229
Query: 199 GLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSP 257
LP GPTAHF++S + LRK+IK G PT H PE++LNNF TRLGH +GR+ SLFP P
Sbjct: 230 HLPHGPTAHFRMSSVRLRKEIKRKGKEPTQHSPEVILNNFTTRLGHSIGRMFASLFPHDP 289
Query: 258 EFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFET 317
+F GR+V TFHNQRD+IFFR H RY+F++
Sbjct: 290 QFIGRQVATFHNQRDYIFFRFH--------------------------------RYLFKS 317
Query: 318 KESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH 377
++ G +QE GPRFTLKL SLQ GTFD+K GE+EWVH
Sbjct: 318 EKKVG------------------------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVH 353
Query: 378 KP-EMDTSRRRFFL 390
KP EMDTSRR+F L
Sbjct: 354 KPREMDTSRRKFHL 367
>gi|225711246|gb|ACO11469.1| Ribosome production factor 1 [Caligus rogercresseyi]
Length = 394
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 158/406 (38%), Positives = 216/406 (53%), Gaps = 93/406 (22%)
Query: 19 KENDKNNENISKKM--------KKEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARD 70
K+ D + EN S + K+ I + +KNK +R+ KLK KKVE+RK+ R
Sbjct: 48 KQTDFSGENTSMALSEKEKDIRKQTIRLAGMKNKLRRAEAFKKLKRLKKVERRKRQVDR- 106
Query: 71 AAEKRALELGEEPPARMTPRTIENTREPDETVCR--------------------PDDDEL 110
+K A LG E P ++ PRTIENTRE DET + P ++ +
Sbjct: 107 --KKEAEALGSEAPPKLVPRTIENTREADETTVKDVAPSANEDDEEAGGEEKEPPQEESI 164
Query: 111 FAGNDA--DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLK 168
D DEF S + PK++IT+ +R F+ EL +IPN+ + R +K
Sbjct: 165 EDQWDILNDEFKSYFDKSYVPKVIITSGDNPHSRSITFMKELSRMIPNAELFWRNKSSIK 224
Query: 169 KIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTG 227
KIIE ++++T +++V+ N R+P+ ++I LPDGPTAHFK+S + ++ KN N T
Sbjct: 225 KIIEGGVEREYTDVVIVNENNRKPNGIVISHLPDGPTAHFKISNVKTTPEMKKNWRNITV 284
Query: 228 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFI 287
H PE++LNNF TRLGH +GR++ SLF PEFRG+R VTFHNQRD+IFFRHHR
Sbjct: 285 HRPEVILNNFTTRLGHSIGRMLASLFHYEPEFRGQRAVTFHNQRDYIFFRHHR------- 337
Query: 288 SCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRL 347
YE + N +K K L
Sbjct: 338 ---------------------YEFK-------------NTEKVK---------------L 348
Query: 348 QECGPRFTLKLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 390
+E GPRFTLKL SLQ GTFD+K GE+EW+ + EM+TSRRRFFL
Sbjct: 349 KELGPRFTLKLRSLQKGTFDSKLGEYEWIITGRRHEMETSRRRFFL 394
>gi|449683354|ref|XP_004210333.1| PREDICTED: ribosome production factor 1-like [Hydra magnipapillata]
Length = 366
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/314 (43%), Positives = 183/314 (58%), Gaps = 58/314 (18%)
Query: 79 LGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTC-R 137
LGE+ P + +T++N R DET +D+E+ DE +S K PK+L TTC R
Sbjct: 109 LGEKAPPKKMQKTLDNMRVKDETFVDIEDEEILQDTMTDEMASYFKGEQVPKVLFTTCNR 168
Query: 138 FNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLI 197
+ FI +L+ ++PNS Y R DLKKII A ++ FT +++++ ++++ + L+I
Sbjct: 169 PKCHETLNFIEDLVKIVPNSEYRNRKGIDLKKIIPQAVERGFTDLVIINEDQKKANGLII 228
Query: 198 IGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSP 257
LP+GPTAHFKLS + +DIKNHG + H PEL+LNNF TRLGH V RL+ +LFP P
Sbjct: 229 SHLPNGPTAHFKLSSVRKIRDIKNHGKTSQHRPELILNNFNTRLGHSVARLLAALFPYDP 288
Query: 258 EFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFET 317
+F+GRR VTFHNQRDFIFFRHH RY+F+
Sbjct: 289 QFQGRRAVTFHNQRDFIFFRHH--------------------------------RYVFK- 315
Query: 318 KESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH 377
NGKK T LQE GPRFTLKL SLQ G+FD+K GE+EW+H
Sbjct: 316 --------NGKK---------------TGLQELGPRFTLKLRSLQKGSFDSKYGEYEWIH 352
Query: 378 K-PEMDTSRRRFFL 390
K +MDTSRR+F L
Sbjct: 353 KRKDMDTSRRKFHL 366
>gi|326925169|ref|XP_003208792.1| PREDICTED: ribosome production factor 1-like [Meleagris gallopavo]
Length = 278
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 179/312 (57%), Gaps = 58/312 (18%)
Query: 81 EEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNS 140
++ P + P+TIEN R DET P+D+E+ DEF+ + PKILITT
Sbjct: 23 QKAPPKAIPKTIENQRIYDETTVDPNDEEVAFDIATDEFAPYFNRQTVPKILITTSDRPR 82
Query: 141 NRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGL 200
R F +L +VIPNSH Y R LK+II +DFT +IV++ +R+ P+ L++ L
Sbjct: 83 GRTVRFCEQLSTVIPNSHVYYRRGLALKRIIPQCIARDFTDLIVINEDRKIPNGLVLSHL 142
Query: 201 PDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEF 259
PDGPTAHF++S + LRK+IK G PT H+PE++LNNF TRLGH +GR+ SLFP P+F
Sbjct: 143 PDGPTAHFRMSSVRLRKEIKRKGKQPTEHVPEVILNNFTTRLGHSIGRMFASLFPHDPQF 202
Query: 260 RGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKE 319
GR+V TFHNQRDFIFFR H RYIF++++
Sbjct: 203 IGRQVATFHNQRDFIFFRFH--------------------------------RYIFKSEK 230
Query: 320 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK- 378
G +QE GPRFTLKL SLQ GTFD+K GE+EW+HK
Sbjct: 231 KVG------------------------IQELGPRFTLKLRSLQKGTFDSKFGEYEWIHKR 266
Query: 379 PEMDTSRRRFFL 390
EMDTSRR+F L
Sbjct: 267 REMDTSRRKFHL 278
>gi|225708124|gb|ACO09908.1| Ribosome production factor 1 [Osmerus mordax]
Length = 355
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 198/358 (55%), Gaps = 69/358 (19%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKA----RDAAEKRALELGEEPPARMTPRTIEN 94
S IKNK++R + KLK +K+ +K K RDA LG++ P + P+TIEN
Sbjct: 61 SEIKNKQRRHLMFMKLKQEKRKQKMVLKKKKKKERDA-------LGDKAPPKEVPKTIEN 113
Query: 95 TREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
R DET P+D+E+ DEFS+ + PK+LITT R F +L +VI
Sbjct: 114 QRVYDETTVDPEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFCGQLATVI 173
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
P++H Y R LKK+I + FT ++V++ +R+ P+ +++ LPDGPTAHFK+S +
Sbjct: 174 PDAHVYYRRGLALKKVIPQCIARGFTYLMVINEDRKVPNGMVLCHLPDGPTAHFKVSSVR 233
Query: 215 LRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
LRK++K G +PT H PE++LNNF TRLGH +GRL +LFP P+F GR+V TFHNQRDF
Sbjct: 234 LRKEMKRRGKDPTEHTPEVILNNFTTRLGHSIGRLFAALFPHDPQFVGRQVATFHNQRDF 293
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFR H RYIF+ ++ G
Sbjct: 294 IFFRFH--------------------------------RYIFKNEKRVG----------- 310
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWV K EMD RRRF L
Sbjct: 311 -------------IQELGPRFTLKLRSLQKGTFDSKFGEYEWVLKRHEMDACRRRFNL 355
>gi|410921642|ref|XP_003974292.1| PREDICTED: ribosome production factor 1-like [Takifugu rubripes]
Length = 351
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 148/378 (39%), Positives = 210/378 (55%), Gaps = 61/378 (16%)
Query: 15 NEGEKENDKNNENISKKMKKEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEK 74
+E ++E +K++ + + S IKNK++R + KLK +K+ +K + + +K
Sbjct: 33 SEVKQEMEKSDAAEATALPPTFSVSEIKNKQRRHLMFMKLKQEKRKQKMQLKRK---KKK 89
Query: 75 RALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILIT 134
LG++ P + P+TIEN R DET P D+E+ DEFS+ PK+LIT
Sbjct: 90 EREALGDKAPPKEVPKTIENQRVYDETTVDPADEEVAFDEATDEFSAYFHGLTNPKVLIT 149
Query: 135 TCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDA 194
T R F ++L SVIPN+H + R LK+II +DFT ++V++ +R+ P+
Sbjct: 150 TSDRPRGRTVKFCNQLASVIPNAHVFYRRGLALKRIIPQCISRDFTYLMVINEDRKVPNG 209
Query: 195 LLIIGLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLF 253
+++ LP+GPTAHFK+S + LRK++K G PT H PE++LNNF TRLGH +GR+ +LF
Sbjct: 210 MVLCHLPEGPTAHFKVSNVRLRKEMKRRGKEPTDHYPEVILNNFTTRLGHSIGRMFAALF 269
Query: 254 PQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRY 313
PQ+P+F GR+V TFHNQRDF+FFR H RY
Sbjct: 270 PQNPQFLGRQVATFHNQRDFVFFRFH--------------------------------RY 297
Query: 314 IFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEF 373
IF+ ++ G +QE GPRFTLKL SLQ GTFD+K GE+
Sbjct: 298 IFKNEKKVG------------------------IQELGPRFTLKLRSLQKGTFDSKYGEY 333
Query: 374 EWVHK-PEMDTSRRRFFL 390
EWV K EMD RR+F L
Sbjct: 334 EWVLKRHEMDACRRKFQL 351
>gi|55824741|gb|AAH86515.1| Bxdc5 protein, partial [Rattus norvegicus]
Length = 344
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 194/341 (56%), Gaps = 60/341 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q++ EK K E+ AL G++ P + P+TI+N R
Sbjct: 54 SEIKNKQRRHLMFTRWKQQQRKEKLAAKKKL-KREREAL--GDKAPPKPVPKTIDNQRVY 110
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P+D+E+ DEF+S + +PKILITT R +L +VIP+SH
Sbjct: 111 DETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSH 170
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+
Sbjct: 171 VYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKE 230
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G +PT H+PE++LNNF TRLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR
Sbjct: 231 IKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFR 290
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF++++ G
Sbjct: 291 FH--------------------------------RYIFKSEKKVG--------------- 303
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK 378
+QE GPRFTLKL SLQ GTFD+K GE+EWVHK
Sbjct: 304 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHK 335
>gi|71153721|sp|Q5RJS9.2|RPF1_RAT RecName: Full=Ribosome production factor 1; AltName: Full=Brix
domain-containing protein 5; AltName: Full=Ribosome
biogenesis protein RPF1
Length = 345
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 194/341 (56%), Gaps = 60/341 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q++ EK K E+ AL G++ P + P+TI+N R
Sbjct: 55 SEIKNKQRRHLMFTRWKQQQRKEKLAAKKKL-KREREAL--GDKAPPKPVPKTIDNQRVY 111
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P+D+E+ DEF+S + +PKILITT R +L +VIP+SH
Sbjct: 112 DETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSH 171
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+
Sbjct: 172 VYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKE 231
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK G +PT H+PE++LNNF TRLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR
Sbjct: 232 IKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFR 291
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF++++ G
Sbjct: 292 FH--------------------------------RYIFKSEKKVG--------------- 304
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK 378
+QE GPRFTLKL SLQ GTFD+K GE+EWVHK
Sbjct: 305 ---------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHK 336
>gi|397603955|gb|EJK58570.1| hypothetical protein THAOC_21295 [Thalassiosira oceanica]
Length = 346
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 151/362 (41%), Positives = 202/362 (55%), Gaps = 57/362 (15%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTRE 97
P I NK KRS ++ K KK +KR +R A EK+A LGE+ PA+ PRT++NTRE
Sbjct: 33 PGHITNKLKRSEMYGKYLLAKKAQKRA---SRIAREKQAEALGEDAPAKPKPRTLDNTRE 89
Query: 98 PDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNS 157
+ T + DD+E+ A DEF+ PKIL+TT S FI++L+ IP
Sbjct: 90 SEVTTVKEDDEEIIADEAEDEFAPYFSDEIRPKILLTTRPCPSAELFHFIADLMRFIPQM 149
Query: 158 HYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGL-PD-------GPTAHFK 209
+YY R +Y +K+I + + FT +IV+ + + +LI L P GPTA FK
Sbjct: 150 YYYPRKSYSVKEICTFGSNRRFTHVIVLSEKSKVCNGMLISHLRPSTAANGLGGPTAFFK 209
Query: 210 LSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHN 269
LS + D+ N+G+ T H+PEL L+ F TRLGHR GR + SLFP + +F+GR+V TFHN
Sbjct: 210 LSNYIPSTDVPNNGSATNHVPELNLHGFTTRLGHRAGRFLGSLFPHNAQFQGRQVATFHN 269
Query: 270 QRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKK 329
QRDFIF RHH RYIFE +G D
Sbjct: 270 QRDFIFVRHH--------------------------------RYIFE----EGKDT---- 289
Query: 330 AKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRF 388
S++T ++K RLQE GPRFT+K+ LQ GTFDT+ GE+EW HK EMDT+RR+F
Sbjct: 290 -----SKETKEKKTKARLQELGPRFTIKMRWLQEGTFDTQFGEYEWFHKRKEMDTTRRKF 344
Query: 389 FL 390
L
Sbjct: 345 HL 346
>gi|325181431|emb|CCA15847.1| ribosome production factor 1 putative [Albugo laibachii Nc14]
gi|325193038|emb|CCA27409.1| ribosome production factor 1 putative [Albugo laibachii Nc14]
Length = 331
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 204/360 (56%), Gaps = 68/360 (18%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKK--LKARDAAEKRALELGEEPPARMTPRTIENT 95
PS IKNK KR V + + KK+ K+ + L+ R E+ + EEP RTI+NT
Sbjct: 33 PSHIKNKMKRMQVMQQYRKSKKLNKKAQQTLRNRQQMEEFGKIVKEEP------RTIDNT 86
Query: 96 REPDETVCRPDDDE----LFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELL 151
REP+ T+ +++ ++ DEF++I PKI+ITT F S FI+EL+
Sbjct: 87 REPNVTMINAENENENEEIYQDERDDEFAAIFSDQTTPKIMITTRPFPSGELYHFINELM 146
Query: 152 SVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLS 211
+IPNS YYKRG +++K+I ++A K FT +IV+ + + +L+ LP GPT+ FK+S
Sbjct: 147 QLIPNSFYYKRGRFNIKEICQFASNKLFTHLIVLSEKSKVCNGMLLSRLPSGPTSFFKVS 206
Query: 212 KLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQR 271
+ L++ I +HG T H PE++LNNF+TRLG R+GR + S F Q PEF+GR+VVTFHNQR
Sbjct: 207 NVKLQESITDHGRRTDHQPEIILNNFSTRLGRRIGRFLGSCFRQQPEFQGRQVVTFHNQR 266
Query: 272 DFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAK 331
DFIF RHH RYIF D NGK+A
Sbjct: 267 DFIFIRHH--------------------------------RYIF--------DENGKRA- 285
Query: 332 DAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
RLQE GP FT+KL LQ GTFDTK GE+EW+ + + +TSR+RF+L
Sbjct: 286 --------------RLQEIGPSFTIKLKWLQDGTFDTKYGEYEWIARSYKQNTSRKRFYL 331
>gi|301102011|ref|XP_002900093.1| ribosome production factor 1, putative [Phytophthora infestans
T30-4]
gi|262102245|gb|EEY60297.1| ribosome production factor 1, putative [Phytophthora infestans
T30-4]
Length = 354
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 153/334 (45%), Positives = 190/334 (56%), Gaps = 62/334 (18%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRK-KLKARDAAEKRALELGEEPPARMTPRTIENTR 96
PS IKNK KR V K + +KK K+ +LK R AE E+GEE PA+M PRTI+NTR
Sbjct: 30 PSHIKNKMKRQIVMQKFRKEKKEAKKAAQLKRRREAE----EMGEEAPAKMEPRTIDNTR 85
Query: 97 EPDET-VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIP 155
E + T V D+E+ A DEF+SI APK++ITT F S FI +L+ ++P
Sbjct: 86 EKEVTMVSNEGDEEIEADERDDEFASIFANEEAPKLMITTRPFPSGELYHFIKDLMDLLP 145
Query: 156 NSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVL 215
NS YYKRGT+D+K+I+++A K FT +IV+ + + +L+ LP+GPTA FK+S + L
Sbjct: 146 NSFYYKRGTFDIKEIVQFASNKKFTHLIVLSEKSKICNGMLVSRLPEGPTAFFKVSNVKL 205
Query: 216 RKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 275
IK G T H PEL+LNNF+TRLGHRVGR + SLF PEF G +VVTFHNQRDFIF
Sbjct: 206 TASIKERGRRTNHQPELILNNFSTRLGHRVGRFLGSLFEHQPEFEGHQVVTFHNQRDFIF 265
Query: 276 FRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKS 335
RHH RY FE N KKA
Sbjct: 266 VRHH--------------------------------RYTFE---------NEKKA----- 279
Query: 336 EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTK 369
RLQE GPRFT+KL LQ GTFDTK
Sbjct: 280 ----------RLQEIGPRFTMKLRWLQQGTFDTK 303
>gi|391342960|ref|XP_003745783.1| PREDICTED: ribosome production factor 1-like [Metaseiulus
occidentalis]
Length = 300
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 196/353 (55%), Gaps = 59/353 (16%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK KR ++ KLK +K KR+ AR K LGE P + PRT+ENTRE
Sbjct: 6 SEIKNKAKRQEIYFKLKKEKNKAKRE---ARLKRVKELKALGENAPPKQIPRTLENTREY 62
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DETV D+E+ + DEF+S + PKIL+TT + F EL V+PN+
Sbjct: 63 DETVVEAGDEEVELDDQTDEFASYFNKEYVPKILLTTVDKPRGKTIKFCRELELVLPNAE 122
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
+ R LKK I A ++ FT +VV+ +R P LL+I LP+GPTA++K+S + D
Sbjct: 123 FKYRNYAHLKKTIPKAIERGFTDFLVVNEHRGAPSGLLVIHLPEGPTAYYKISSVKPMTD 182
Query: 219 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
IK+ T H PE++LNNF TRLGH V R++ LF +PEF GRRVVTFHNQRDFIFFRH
Sbjct: 183 IKHAAQFTSHRPEVLLNNFGTRLGHSVSRMLACLFHYNPEFHGRRVVTFHNQRDFIFFRH 242
Query: 279 HRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKT 338
HR YE D++G+K
Sbjct: 243 HR----------------------------YEF------------DSDGQKC-------- 254
Query: 339 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
RLQE GPRFTLKL SLQ GTFD+K GE+EW+ K EM+TSRRRFFL
Sbjct: 255 -------RLQEIGPRFTLKLQSLQKGTFDSKYGEYEWILKRHEMETSRRRFFL 300
>gi|313228457|emb|CBY23608.1| unnamed protein product [Oikopleura dioica]
Length = 415
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 155/359 (43%), Positives = 200/359 (55%), Gaps = 73/359 (20%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
IK+K+KR+ ++ L QK+ +K K+ K R A LE GE+ + +TIE+ R+ DE
Sbjct: 121 IKHKQKRTDMYLNLLRQKRRQKMKERKQRKMAR---LESGEKAEEK---KTIESMRKFDE 174
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPA--FISELLSVIPNSH 158
T PDD E+ DE S G PKILI T N+ +GP ELL IPNS
Sbjct: 175 TTVEPDDAEVDWEEQNDELSDYFNNGTVPKILIMTR--NAPKGPMVKMCHELLKTIPNSQ 232
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE-PDALLIIGLPDGPTAHFKLSKLVLRK 217
++ R + LKKII A KK FT++IVV +R+ P+ L II LP GPTAHFK+S + LR+
Sbjct: 233 FFFRQGFALKKIIPQAIKKGFTAMIVVSADRKWVPNDLKIIYLPGGPTAHFKMSSVRLRE 292
Query: 218 DIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
K PT H+PEL+LNNF +RLG R+GR+ +LFPQ PEF GR+VVTFHNQRD+IFFR
Sbjct: 293 KTKGGDTPTTHLPELILNNFKSRLGRRIGRMFAALFPQVPEFEGRQVVTFHNQRDYIFFR 352
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF +++ G
Sbjct: 353 QH--------------------------------RYIFRSEKRAG--------------- 365
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH-KPEMDT-----SRRRFFL 390
L+E GPRFTLKL SLQ GTFD+K GEFE+ H + EMDT S+++FFL
Sbjct: 366 ---------LKELGPRFTLKLRSLQKGTFDSKYGEFEYEHRRKEMDTEGHGYSKKKFFL 415
>gi|349501004|ref|NP_001002160.2| ribosome production factor 1 isoform 1 [Danio rerio]
Length = 355
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/354 (40%), Positives = 201/354 (56%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R H K+ +++K+++ + +K LG++ P + P+TIEN R
Sbjct: 61 SEIKNKQRR---HTMFLKLKEEKRKKRMELKKKKKKERKALGDKAPPKEVPKTIENQRIY 117
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P+D+E+ DEFS+ + PK+LITT R F +L +VIP+++
Sbjct: 118 DETTVNPEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFCDQLATVIPHAY 177
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKK+I + FT ++V++ +R+ P+ +++ LPDGPTAHFK+S + LRK+
Sbjct: 178 VYYRRGLALKKVIPQCISRGFTYLMVINEDRKVPNGMVLCHLPDGPTAHFKVSSVRLRKE 237
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
+K G NPT H PE++LNNF TRLGH +GRL +LFP P+F GR+V TFHNQRDFIFFR
Sbjct: 238 MKRRGKNPTEHSPEVILNNFTTRLGHSIGRLFAALFPHDPQFVGRQVATFHNQRDFIFFR 297
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF+ ++ G
Sbjct: 298 FH--------------------------------RYIFKNEKKVG--------------- 310
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHK EMD+SRR+F L
Sbjct: 311 ---------IQELGPRFTLKLRSLQKGTFDSKFGEYEWVHKRHEMDSSRRKFHL 355
>gi|324518755|gb|ADY47195.1| Brix domain-containing protein [Ascaris suum]
Length = 317
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 142/348 (40%), Positives = 186/348 (53%), Gaps = 65/348 (18%)
Query: 53 KLKHQKKVEKRKKLKARDAAEKRALE---------LGEEPPARMTPRTIENTREPDETVC 103
K+ K EK + ++ + AA KRA + LG+ P + P+TIENTRE D T+
Sbjct: 25 KISRATKQEKARSIRLQKAAAKRARQNARRKLREKLGDAAPPKEQPKTIENTREYDLTMV 84
Query: 104 RPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG 163
DD+E+ DE SS + PK+LITT + F E+ IPN+ + R
Sbjct: 85 EADDEEVLHDEANDEMSSYFNREIKPKVLITTSPYAKVNTFKFCYEMQKCIPNAEVFTRK 144
Query: 164 TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG 223
LKK+++ AK+ ++T +IVVH +R+ P+ +++ LPDGPTA FK++ L KDIK G
Sbjct: 145 GIALKKVVKQAKQNEYTDLIVVHEDRKMPNGIVLCHLPDGPTAFFKINSLKFTKDIKRKG 204
Query: 224 NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVP 283
T H PE++LNNF TRLGH V R+ LFP P F GRRVVTFHNQRD+IFFRHH
Sbjct: 205 ETTSHNPEVILNNFNTRLGHTVARMFACLFPFEPMFTGRRVVTFHNQRDYIFFRHH---- 260
Query: 284 LEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKV 343
RY F+ + K +
Sbjct: 261 ----------------------------RYEFKREGEKAA-------------------- 272
Query: 344 ITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
L E GPRFTL+L LQ GTFDT+ GE+EWV K EM+TSRRRFFL
Sbjct: 273 ---LLELGPRFTLRLKWLQKGTFDTRCGEYEWVLKRHEMETSRRRFFL 317
>gi|47225736|emb|CAG08079.1| unnamed protein product [Tetraodon nigroviridis]
Length = 339
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 139/341 (40%), Positives = 192/341 (56%), Gaps = 60/341 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + KLK +K+ +K + + + + LG++ P + P+TIEN R
Sbjct: 58 SEIKNKQRRHLMFMKLKQEKRKQKMQLKRKKKKERE---ALGDKAPPKEVPKTIENQRVY 114
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P D+E+ DEFSS PK+LITT R F ++L +VIPN+H
Sbjct: 115 DETTVDPADEEVAFDEGTDEFSSYFNGLTNPKVLITTSDRPRGRTVKFCNQLATVIPNAH 174
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LK+II +DFT +IV++ +R+ P+ +++ LP+GPTAHFK+S + LRK+
Sbjct: 175 VYYRRGLALKRIIPQCVSRDFTYLIVINEDRKVPNGMVLCHLPEGPTAHFKVSSVRLRKE 234
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
+K G +PT H PE++LNNF TRLGH +GR+ +LFPQ+P+F GR+V TFHNQRDF+FFR
Sbjct: 235 MKRRGKDPTEHYPEVILNNFTTRLGHSIGRMFAALFPQNPQFLGRQVATFHNQRDFVFFR 294
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF+ ++ G
Sbjct: 295 FH--------------------------------RYIFKNEKKVG--------------- 307
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK 378
+QE GPRFTLKL SLQ GTFD+K GE+EWV K
Sbjct: 308 ---------IQELGPRFTLKLRSLQKGTFDSKFGEYEWVLK 339
>gi|238231629|ref|NP_001154000.1| ribosome production factor 1 [Oncorhynchus mykiss]
gi|225703316|gb|ACO07504.1| Ribosome production factor 1 [Oncorhynchus mykiss]
Length = 354
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 197/356 (55%), Gaps = 69/356 (19%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKA----RDAAEKRALELGEEPPARMTPRTIEN 94
S IKNK++R + KLK +K+ +K K RDA LG++ P + P+TIEN
Sbjct: 60 SEIKNKQRRHLMFMKLKQEKRKQKVAMKKKKKKERDA-------LGDKAPPKEVPKTIEN 112
Query: 95 TREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
R DET P+D+E+ DEFS+ + PK+LITT R F ++L +VI
Sbjct: 113 QRVYDETTVNPEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFCNQLATVI 172
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
P++H Y R LKK+I + FT ++V++ +R+ P+ +++ LPDGPTAHFK+S +
Sbjct: 173 PDAHVYYRRGLALKKVIPQCIARGFTYLMVINEDRKVPNGMVLCHLPDGPTAHFKVSSVR 232
Query: 215 LRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
LRK++K G +PT H PE++LNNF TRLGH +GRL +LFP P+F GR+V TFHNQRDF
Sbjct: 233 LRKEMKRRGKDPTEHSPEVILNNFTTRLGHSMGRLFAALFPHDPQFVGRQVATFHNQRDF 292
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFR H RYIF+ ++ G
Sbjct: 293 IFFRFH--------------------------------RYIFKNEQRVG----------- 309
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRF 388
+QE GPRFTLKL SLQ GTFD+K GE+EWV K E D RRRF
Sbjct: 310 -------------IQELGPRFTLKLRSLQKGTFDSKFGEYEWVLKRHENDVCRRRF 352
>gi|170590770|ref|XP_001900144.1| Brix domain containing protein [Brugia malayi]
gi|158592294|gb|EDP30894.1| Brix domain containing protein [Brugia malayi]
Length = 334
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 155/395 (39%), Positives = 204/395 (51%), Gaps = 72/395 (18%)
Query: 6 KKSEGEELLNEGEKENDKNNENISKKMKKEILPSMIKNKEKRSAVHAKLKHQKKVEKRKK 65
K+S E L EG +E I+K I S ++ ++ +++ K E+ KK
Sbjct: 2 KRSSKEALKGEGGRE-------INKASVASITSSAKSAEQNLERLYKTIRNSAKNERGKK 54
Query: 66 LKARDAAEKRALE---------LGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDA 116
L+ A+ KR + LGEE + PRTIE+TRE D TV DD E+
Sbjct: 55 LRLEKASAKRERQKLRLKLREKLGEEKIPKEKPRTIESTREFDITVIEDDDQEVQHDEAN 114
Query: 117 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
DE S+ PKILITT + F EL IPN+ + R LKK+++ AK
Sbjct: 115 DEMSTYFNDEIPPKILITTSPYAKVNTFKFCYELQKCIPNADIFTRKGIPLKKVVKQAKS 174
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 236
K++T +IVVH +R+ P+ +++ LPDGPTA FK++ L K++K G T H PE+VLNN
Sbjct: 175 KEYTDLIVVHEDRKIPNGIVLCHLPDGPTAFFKINSLTFTKNLKKKGESTVHYPEIVLNN 234
Query: 237 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILC 296
F TRLGH + R+ LFPQ P + GRRVVTFHNQRD+IFFRHHR
Sbjct: 235 FNTRLGHTIARMFACLFPQKPMYSGRRVVTFHNQRDYIFFRHHR---------------- 278
Query: 297 SYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 356
YE + G+KA L E GPRFTL
Sbjct: 279 ------------YEFK------------REGEKAA---------------LLELGPRFTL 299
Query: 357 KLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
+L LQ GTFDT+ GE+EWV K EM++SRRRFFL
Sbjct: 300 RLKWLQKGTFDTRYGEYEWVLKRHEMESSRRRFFL 334
>gi|344242508|gb|EGV98611.1| Ribosome production factor 1 [Cricetulus griseus]
Length = 590
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 173/301 (57%), Gaps = 57/301 (18%)
Query: 79 LGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRF 138
LG++ P + P+TI+N R DET P D+E+ DEF+S + +PKILITT
Sbjct: 57 LGDKAPPKPVPKTIDNQRVYDETTVDPTDEEVAYDEATDEFASYFNRQTSPKILITTSDR 116
Query: 139 NSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLII 198
R +L +VIP+SH Y R LKKII +DFT +IV++ +R+ P+ L++
Sbjct: 117 PHGRTVRLCEQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILS 176
Query: 199 GLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSP 257
LP+GPTAHFK+S + LRK+IK G +PT H+PE++LNNF TRLGH +GR+ SLFP +P
Sbjct: 177 HLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNP 236
Query: 258 EFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFET 317
+F GR+V TFHNQRD+IFFR H RYIF++
Sbjct: 237 QFIGRQVATFHNQRDYIFFRFH--------------------------------RYIFKS 264
Query: 318 KESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH 377
++ G +QE GPRFTLKL SLQ GTFD+K GE+EWVH
Sbjct: 265 EKKVG------------------------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVH 300
Query: 378 K 378
K
Sbjct: 301 K 301
>gi|71153716|sp|Q6IQU6.1|RPF1_DANRE RecName: Full=Ribosome production factor 1; AltName: Full=Brix
domain-containing protein 5; AltName: Full=Ribosome
biogenesis protein RPF1
gi|47937837|gb|AAH71307.1| Brix domain containing 5 [Danio rerio]
Length = 330
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/354 (40%), Positives = 200/354 (56%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R H K+ +++K+++ + +K L ++ P + P+TIEN R
Sbjct: 36 SEIKNKQRR---HTMFLKLKEEKRKKRMELKKKKKKERKALDDKAPPKEVPKTIENQRIY 92
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P+D+E+ DEFS+ + PK+LITT R F +L +VIP+++
Sbjct: 93 DETTVNPEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFCDQLATVIPHAY 152
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKK+I + FT ++V++ +R+ P+ +++ LPDGPTAHFK+S + LRK+
Sbjct: 153 VYYRRGLALKKVIPQCISRGFTYLMVINEDRKVPNGMVLCHLPDGPTAHFKVSSVRLRKE 212
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
+K G NPT H PE++LNNF TRLGH +GRL +LFP P+F GR+V TFHNQRDFIFFR
Sbjct: 213 MKRRGKNPTEHSPEVILNNFTTRLGHSIGRLFAALFPHDPQFVGRQVATFHNQRDFIFFR 272
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF+ ++ G
Sbjct: 273 FH--------------------------------RYIFKNEKKVG--------------- 285
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWVHK EMD+SRR+F L
Sbjct: 286 ---------IQELGPRFTLKLRSLQKGTFDSKFGEYEWVHKRHEMDSSRRKFHL 330
>gi|449276923|gb|EMC85273.1| Ribosome production factor 1, partial [Columba livia]
Length = 254
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 137/309 (44%), Positives = 176/309 (56%), Gaps = 58/309 (18%)
Query: 84 PARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRG 143
P + P+TIEN R DET +D+E+ DEF+ + PKILITT R
Sbjct: 2 PPKAIPKTIENQRVYDETTVDLNDEEVAFDEATDEFAPYFNRQTVPKILITTSDRPRGRT 61
Query: 144 PAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDG 203
F +L +VIPNSH Y R LK+II +DFT +IV++ +R+ P+ L++ LPDG
Sbjct: 62 VRFCEQLSTVIPNSHVYYRRGLALKRIIPQCIARDFTDLIVINEDRKIPNGLVLSHLPDG 121
Query: 204 PTAHFKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 262
PTAHF++S + LRK+IK G PT H PE++LNNF TRLGH VGR++ LFP SP+F GR
Sbjct: 122 PTAHFRMSSVRLRKEIKRKGKEPTEHTPEVILNNFTTRLGHPVGRMLACLFPHSPQFIGR 181
Query: 263 RVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKG 322
+V TFHNQRD+IFFR H RYIF++++ G
Sbjct: 182 QVATFHNQRDYIFFRFH--------------------------------RYIFKSEKKVG 209
Query: 323 SDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEM 381
+QE GPRFTLKL SLQ GTFD+K GE+EW+HK EM
Sbjct: 210 ------------------------IQELGPRFTLKLRSLQKGTFDSKFGEYEWIHKRREM 245
Query: 382 DTSRRRFFL 390
DTSRR+F L
Sbjct: 246 DTSRRKFHL 254
>gi|308510370|ref|XP_003117368.1| hypothetical protein CRE_01895 [Caenorhabditis remanei]
gi|308242282|gb|EFO86234.1| hypothetical protein CRE_01895 [Caenorhabditis remanei]
Length = 382
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 137/343 (39%), Positives = 183/343 (53%), Gaps = 63/343 (18%)
Query: 49 AVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDD 108
A+ L+ K+ + ++ K RD ELGE P + P+TIE+ RE D T+ DD
Sbjct: 102 ALKRALRKDKRARQEERTKIRD-------ELGESAPQKEVPKTIESMREYDATMVDEQDD 154
Query: 109 ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLK 168
E+ DEF+ + PK++IT F EL IPNS + R LK
Sbjct: 155 EVEHDEANDEFAPYFNRETTPKVMITMTPKAKITTFKFCFELQKCIPNSEMFTRKNVLLK 214
Query: 169 KIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH 228
IIE AK+++FT ++VVH +R++P+ ++ LP+GPTA+FK++ L +D+K G T H
Sbjct: 215 TIIEQAKEREFTDLLVVHEDRKKPNGIIFCHLPEGPTAYFKINSLTFTQDLKKFGESTAH 274
Query: 229 IPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFIS 288
PE++LNNF TRLGH + R++ LFP P+F GRRVVTFHNQRD+IFFRHH
Sbjct: 275 FPEVILNNFNTRLGHNIARMLACLFPHDPKFTGRRVVTFHNQRDYIFFRHH--------- 325
Query: 289 CYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQ 348
RY F+ + +K + L
Sbjct: 326 -----------------------RYEFKKEGTKAA-----------------------LL 339
Query: 349 ECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
E GPRFTL+L LQ GTFD K GEFEWV K EM+TSRRRFFL
Sbjct: 340 ELGPRFTLRLKWLQKGTFDAKWGEFEWVLKRHEMETSRRRFFL 382
>gi|213511502|ref|NP_001134288.1| ribosome production factor 1 [Salmo salar]
gi|209732114|gb|ACI66926.1| Ribosome production factor 1 [Salmo salar]
Length = 354
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 200/354 (56%), Gaps = 61/354 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + KLK Q+K + + LK + E+ AL G++ P + P+TIEN R
Sbjct: 60 SEIKNKQRRHLMFMKLK-QEKRKLKVALKKKKKKERDAL--GDKAPPKEVPKTIENQRVY 116
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P+D+E+ DEFS+ + PK+LITT R F ++L +VIP++H
Sbjct: 117 DETTVNPEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFCNQLATVIPDAH 176
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKK+I + FT ++V++ +R+ P+ +++ LPDGPTAHFK+S + LRK+
Sbjct: 177 VYYRRGLALKKVIPQCIARGFTYLMVINEDRKVPNGMVLCHLPDGPTAHFKVSSVRLRKE 236
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
+K G +PT H PE++LNNF TRLGH +GRL +LFP P+F GR+V TFHNQRDFIFFR
Sbjct: 237 MKRRGKDPTEHSPEVILNNFTTRLGHSMGRLFAALFPHDPQFVGRQVATFHNQRDFIFFR 296
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF+ ++ G
Sbjct: 297 FH--------------------------------RYIFKNEKRVG--------------- 309
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWV K E D RRRF L
Sbjct: 310 ---------IQELGPRFTLKLRSLQKGTFDSKFGEYEWVLKRHENDVCRRRFNL 354
>gi|268532524|ref|XP_002631390.1| Hypothetical protein CBG03232 [Caenorhabditis briggsae]
Length = 385
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 143/367 (38%), Positives = 190/367 (51%), Gaps = 65/367 (17%)
Query: 34 KEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRAL---------ELGEEPP 84
+E+L +K + KH K ++ K LK +KRA ELGE P
Sbjct: 74 QELLEKYEASKSAATKTKDDFKHLPKSQRGKALKKALRKDKRARQEERSKIRDELGESAP 133
Query: 85 ARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGP 144
+ P+TIE+ RE D T+ DDE+ DEF+ + PK++IT
Sbjct: 134 QKEVPKTIESMREYDATMVDEQDDEVEHDEANDEFAPYFNRETTPKVMITMTPKAKITTF 193
Query: 145 AFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGP 204
F EL IPNS + R LK IIE AK+++FT ++VVH +R++P+ ++ LP+GP
Sbjct: 194 KFCFELQKCIPNSEIFTRKNVLLKTIIEQAKEREFTDLLVVHEDRKKPNGIIFCHLPEGP 253
Query: 205 TAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 264
TA+FK++ L +D+K G T H PE++LNNF TRLGH + R++ LFP P+F GRRV
Sbjct: 254 TAYFKINSLTFTQDLKKFGESTAHFPEVILNNFNTRLGHNIARMLACLFPHDPKFTGRRV 313
Query: 265 VTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSD 324
VTFHNQRD+IFFRHH RY F+ + +K +
Sbjct: 314 VTFHNQRDYIFFRHH--------------------------------RYEFKKEGTKAA- 340
Query: 325 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDT 383
L E GPRFTL+L LQ GTFD K GEFEWV K EM+T
Sbjct: 341 ----------------------LLELGPRFTLRLKWLQKGTFDAKWGEFEWVLKRHEMET 378
Query: 384 SRRRFFL 390
SRRRFFL
Sbjct: 379 SRRRFFL 385
>gi|402594394|gb|EJW88320.1| brix domain-containing protein [Wuchereria bancrofti]
Length = 334
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 154/395 (38%), Positives = 204/395 (51%), Gaps = 72/395 (18%)
Query: 6 KKSEGEELLNEGEKENDKNNENISKKMKKEILPSMIKNKEKRSAVHAKLKHQKKVEKRKK 65
K+S E L EG +E ISK I S ++ ++ +++ K E+ KK
Sbjct: 2 KRSFKEALKGEGGQE-------ISKASVASITSSAKSAEQNLDRLYKTIRNSAKNERGKK 54
Query: 66 LKARDAAEKRALE---------LGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDA 116
L+ A+ KR + LGEE + PRTIE+TRE D T+ DD E+
Sbjct: 55 LRLEKASAKRERQKMRLKLREKLGEEKVPKEKPRTIESTREFDITLVEDDDQEVQHDEAN 114
Query: 117 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
DE S+ PKILITT + F EL IPN+ + R LKK+++ AK
Sbjct: 115 DEMSAYFNDEIPPKILITTSPYAKVNTFKFCYELQKCIPNADIFTRKGIPLKKVVKQAKS 174
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 236
K++T +IVVH +R+ P+ +++ LPDGPTA FK++ L K++K G T H PE+VLNN
Sbjct: 175 KEYTDLIVVHEDRKIPNGIVLCHLPDGPTAFFKINSLTFTKNLKKKGESTVHYPEIVLNN 234
Query: 237 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILC 296
F TRLGH + R+ LFPQ P + GRRVVTFHNQRD+IFFRHHR
Sbjct: 235 FNTRLGHTIARMFACLFPQKPMYSGRRVVTFHNQRDYIFFRHHR---------------- 278
Query: 297 SYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 356
YE + G+KA L E GPRFTL
Sbjct: 279 ------------YEFK------------REGEKAA---------------LLELGPRFTL 299
Query: 357 KLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
+L LQ GTFD++ GE+EWV K EM++SRRRFFL
Sbjct: 300 RLKWLQKGTFDSRYGEYEWVLKRHEMESSRRRFFL 334
>gi|225719340|gb|ACO15516.1| Ribosome production factor 1 [Caligus clemensi]
Length = 370
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 205/390 (52%), Gaps = 99/390 (25%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
+KNK +R+ + KLK KKVE++K+ +D +K + LG + P + PRTIENTRE DE
Sbjct: 40 MKNKLRRAEAYKKLKRLKKVERKKR---QDVRKKESEALGSDAPPKQIPRTIENTREEDE 96
Query: 101 TVCRP----------DDDELFAGNDA--------------------------DEFSSILK 124
T + D+DE + DEF S
Sbjct: 97 TTVKELPTPSEGKEEDNDEEMPEKEEPSDEPSEEPSEEPSEETIEDQWDILNDEFKSYFD 156
Query: 125 QGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 184
+ PK+LIT+ +R F+ EL +IP++ + R +KKIIE ++++T +++
Sbjct: 157 KSYVPKVLITSGDNPHSRSITFMKELSRMIPHAELFWRNKSSIKKIIEGGVEREYTDVVI 216
Query: 185 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGH 243
V+ N R+P+ +++ LPDGPTAHFK+S + ++K N N T H PE++LNNF TRLGH
Sbjct: 217 VNENNRKPNGIVVSHLPDGPTAHFKMSNVKTTPEMKKNWRNITHHRPEVILNNFTTRLGH 276
Query: 244 RVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIM 303
VGR++ SLF PEFRG+R VTFHNQRD+IFFRHHR
Sbjct: 277 SVGRMLASLFHYEPEFRGQRAVTFHNQRDYIFFRHHR----------------------- 313
Query: 304 KAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQH 363
YE + N +K K L+E GPRFTL+L SLQ
Sbjct: 314 -----YEFK-------------NSEKVK---------------LKELGPRFTLELRSLQK 340
Query: 364 GTFDTKGGEFEWV---HKPEMDTSRRRFFL 390
GTFD+K GE+EW+ + EM+TSRRRFFL
Sbjct: 341 GTFDSKLGEYEWIITGRRHEMETSRRRFFL 370
>gi|390367918|ref|XP_796791.3| PREDICTED: ribosome production factor 1-like, partial
[Strongylocentrotus purpuratus]
Length = 278
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 174/312 (55%), Gaps = 57/312 (18%)
Query: 80 GEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFN 139
G++ P + P+TIEN R DET+ P+D+E+ DE + + PK+LITT
Sbjct: 23 GDKAPPKKVPKTIENMRVFDETMVNPEDEEVTYDEATDEMAPYFNRETLPKVLITTSDKA 82
Query: 140 SNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIG 199
+ EL S IPNS + R LK+II+ A++KDFT +IV++ +R + + ++I
Sbjct: 83 AWTTRRLCKELSSCIPNSEVHHRRHLPLKRIIKSAQEKDFTDLIVINNDRGKANGMVISH 142
Query: 200 LPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEF 259
PDGPT H+K+S + LR+DIK G PT H PEL+LNNF TRLGH +GR I +LFP P F
Sbjct: 143 FPDGPTCHYKMSNVKLRQDIKRCGKPTDHQPELILNNFNTRLGHSIGRQIAALFPHDPNF 202
Query: 260 RGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKE 319
GRRVVTFHNQRDF+FFRHH RY+F+ +
Sbjct: 203 VGRRVVTFHNQRDFVFFRHH--------------------------------RYVFKDNK 230
Query: 320 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK- 378
G LQE GPRFTLKL S Q GTF +K GE+EWVHK
Sbjct: 231 KVG------------------------LQELGPRFTLKLRSFQKGTFVSKFGEYEWVHKR 266
Query: 379 PEMDTSRRRFFL 390
EMD+SRR+F L
Sbjct: 267 HEMDSSRRKFHL 278
>gi|341885995|gb|EGT41930.1| hypothetical protein CAEBREN_31495 [Caenorhabditis brenneri]
Length = 382
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 142/367 (38%), Positives = 191/367 (52%), Gaps = 65/367 (17%)
Query: 34 KEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRAL---------ELGEEPP 84
+E+L +K + KH K ++ K LK +KRA ELGE P
Sbjct: 71 QELLAKYEASKTTATKTKDDFKHLPKSQRGKALKKALRKDKRARQEERSKIRDELGESAP 130
Query: 85 ARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGP 144
+ P+TIE+ RE D T+ DDE+ DEF+ + +PK++IT
Sbjct: 131 QKEVPKTIESMREYDPTMVDEQDDEVEHDEANDEFAPYFNRETSPKVMITMTPKAKITTF 190
Query: 145 AFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGP 204
F EL IPN+ + R LK IIE AK+++FT ++VVH +R++P+ ++ LP+GP
Sbjct: 191 KFCYELQKCIPNAEIFTRKNVLLKTIIEQAKEREFTDLLVVHEDRKKPNGIIFCHLPEGP 250
Query: 205 TAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 264
TA+FK++ L +D+K G T H PE++LNNF TRLGH + R++ LFP P+F GRRV
Sbjct: 251 TAYFKINSLTFTQDLKKFGEATSHHPEVILNNFNTRLGHNIARMLACLFPHDPKFTGRRV 310
Query: 265 VTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSD 324
VTFHNQRD+IFFRHH RY F+ + +K +
Sbjct: 311 VTFHNQRDYIFFRHH--------------------------------RYEFKKEGTKAA- 337
Query: 325 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDT 383
L E GPRFTL+L LQ GTFD K GEFEWV K EM+T
Sbjct: 338 ----------------------LLELGPRFTLRLKWLQKGTFDAKWGEFEWVLKRHEMET 375
Query: 384 SRRRFFL 390
SRRRFFL
Sbjct: 376 SRRRFFL 382
>gi|281206453|gb|EFA80639.1| brix domain-containing protein [Polysphondylium pallidum PN500]
Length = 311
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 141/353 (39%), Positives = 188/353 (53%), Gaps = 60/353 (16%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTRE 97
P IK K +R + KL+ Q+K K K R +K +LGE+ PA PRTIE+ R
Sbjct: 19 PHDIKCKARRVLLSQKLRAQRKKAKESGRKER---QKERQKLGEDGPAAQQPRTIESMRV 75
Query: 98 PDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNS 157
D+T+ +D E + DEFS +G PK ITT + F ++PN+
Sbjct: 76 ADDTIVDEEDPEYQDEIELDEFSKYF-EGKEPKTCITTNEKPGGKAVGFAKLFPRILPNA 134
Query: 158 HYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRK 217
Y+ R ++L +I+++ K +D+T +IVV+ ++ E + L+I LPDGPTA FK++ + +
Sbjct: 135 EYFPRQHFELSEIVKFCKNRDYTDLIVVNEDKGEVNTLMICHLPDGPTALFKVTSITMPD 194
Query: 218 DIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
I G T H EL++NNF TRLGH +GR+ SLFPQ P FRGRRV T HNQRDFIFFR
Sbjct: 195 KIPGGGEMTNHKAELIVNNFTTRLGHTIGRMFASLFPQEPNFRGRRVCTLHNQRDFIFFR 254
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RY+FE+K S AN
Sbjct: 255 QH--------------------------------RYMFESK----SKAN----------- 267
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GPRFTLKL+SLQHGTFDTK GE+ +HK MD R++F L
Sbjct: 268 ---------LQELGPRFTLKLMSLQHGTFDTKSGEYIHLHKAGMDVDRKKFVL 311
>gi|312080220|ref|XP_003142507.1| brix domain-containing protein [Loa loa]
gi|307762330|gb|EFO21564.1| brix domain-containing protein [Loa loa]
gi|393911355|gb|EJD76271.1| brix domain-containing protein, variant [Loa loa]
Length = 334
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 184/339 (54%), Gaps = 59/339 (17%)
Query: 53 KLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFA 112
KL+ +K KR++ K R ++ LGE+ + PRTIE+TRE D T+ DD E+
Sbjct: 54 KLRLEKASAKRERQKMRLKLREK---LGEKALPKEQPRTIESTREHDVTMIEDDDQEVQH 110
Query: 113 GNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 172
DE ++ G PKILITT + F EL IPNS + R LK++++
Sbjct: 111 DEANDEMNAYFSNGILPKILITTSPYAKVNTFKFCYELQKCIPNSDIFTRKGIPLKRVVK 170
Query: 173 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPEL 232
AK K++T +IVVH +R+ P+ +++ LPDGPTA FK++ L K++K G T H PEL
Sbjct: 171 QAKSKEYTDLIVVHEDRKIPNGIVLCHLPDGPTAFFKINSLTFTKNLKKKGESTIHYPEL 230
Query: 233 VLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMW 292
VLNNF TRLGH + R+ LFPQ + GRRVVTFHNQRD+IFFRHHR
Sbjct: 231 VLNNFNTRLGHTIARMFACLFPQKAMYTGRRVVTFHNQRDYIFFRHHR------------ 278
Query: 293 TILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGP 352
YE + G+KA L E GP
Sbjct: 279 ----------------YEFK------------KEGEKAA---------------LLELGP 295
Query: 353 RFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
RFTL+L LQ GTFDT+ GE+EWV K EM++SRRRFFL
Sbjct: 296 RFTLRLKWLQKGTFDTRYGEYEWVLKRHEMESSRRRFFL 334
>gi|223994087|ref|XP_002286727.1| hypothetical protein THAPSDRAFT_31465 [Thalassiosira pseudonana
CCMP1335]
gi|220978042|gb|EED96368.1| hypothetical protein THAPSDRAFT_31465 [Thalassiosira pseudonana
CCMP1335]
Length = 299
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 137/339 (40%), Positives = 182/339 (53%), Gaps = 59/339 (17%)
Query: 62 KRKKLKARDAAEKRALELGEEPPAR-MTPRTIENTREPDETVCRPDDDELFAGNDADEFS 120
K KK + R EK A LGE+ + TPRT++NTRE + T +PDD+E+ A DEF+
Sbjct: 10 KAKKRQTRIQREKEAEALGEDAEVKKQTPRTLDNTRESEVTTVQPDDEEIIADEAEDEFA 69
Query: 121 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 180
PKIL+TT S FIS+L+ P +YY R +Y +K+I + + FT
Sbjct: 70 PYFSDEIRPKILLTTRPCPSGELFHFISDLMRFFPQLYYYPRKSYSVKEICTFGSNRKFT 129
Query: 181 SIIVVHTNRREPDALLIIGLP--------DGPTAHFKLSKLVLRKDIKNHGNPTGHIPEL 232
+IV+ + + +LI L GPTA FK+S ++ D+ N+G+ T H+PEL
Sbjct: 130 HLIVLSEKSKVCNGMLISHLRPSTAANGLGGPTAFFKVSNVIPSSDVPNNGSATNHVPEL 189
Query: 233 VLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMW 292
VLN F TRLGHR GR + SLFP + +F+GR+V TFHNQRDFIF RHHR E I C
Sbjct: 190 VLNGFTTRLGHRAGRFLGSLFPHNAQFQGRQVATFHNQRDFIFVRHHR---YEMICCL-- 244
Query: 293 TILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGP 352
+T ++K RLQE GP
Sbjct: 245 --------------------------------------------ETGKKKTKARLQELGP 260
Query: 353 RFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
RFT+K+ LQ GTFDT+ GE+EW HK EMDT+RR+F L
Sbjct: 261 RFTMKMRWLQEGTFDTQFGEYEWFHKRKEMDTTRRKFHL 299
>gi|427794089|gb|JAA62496.1| Putative ribosome bioproteinsis protein rpf1, partial
[Rhipicephalus pulchellus]
Length = 327
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 151/386 (39%), Positives = 198/386 (51%), Gaps = 98/386 (25%)
Query: 44 KEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVC 103
K++R + KLK K+ KR+ K R K A LGE P + PRTIENTREPD+T+
Sbjct: 1 KKRRLEEYLKLKRAKQKLKRQAQKKR---RKEAEALGENAPPKQEPRTIENTREPDDTMV 57
Query: 104 RPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG 163
+ DD+E+ DE ++ ++ PK+LITT R F EL IPN+ + R
Sbjct: 58 QADDEEVQLDEAMDEMAAYFRKEYVPKLLITTSDNPHTRTIKFCRELKQSIPNADFRWRN 117
Query: 164 TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK--- 220
+KK +E+A ++ ++ I V++ +RR P+ LL+ LPDGPTA+F++S + KDIK
Sbjct: 118 RSRIKKTVEHAIERGYSDIAVINEDRRHPNGLLLTHLPDGPTAYFRISNVKFCKDIKGRA 177
Query: 221 -----------NHGNPTG------------------------HIPELVLNNFATRLGHRV 245
N P G H PE++LNNF TRLGH V
Sbjct: 178 AYSAHRPEVILNXHLPDGPTAYFRISNVKFCKDIKGRAAYSAHRPEVILNNFNTRLGHSV 237
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKA 305
R++ SLF P+F+GRRVVTFHNQRD+IFFRHHR
Sbjct: 238 ARMLASLFHYDPQFQGRRVVTFHNQRDYIFFRHHR------------------------- 272
Query: 306 FCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT 365
YE R +EK S +QE GPRFTL+L SLQ GT
Sbjct: 273 ---YEFR---------------------NAEKVS-------IQEIGPRFTLRLKSLQKGT 301
Query: 366 FDTKGGEFEWVHK-PEMDTSRRRFFL 390
FD+K GE+EWV K EM+TSRRRFFL
Sbjct: 302 FDSKFGEYEWVLKRHEMETSRRRFFL 327
>gi|66356414|ref|XP_625385.1| IMP4-like U3 small nucleolar ribonucleoprotein (snoRNP)
[Cryptosporidium parvum Iowa II]
gi|46226379|gb|EAK87384.1| IMP4-like U3 small nucleolar ribonucleoprotein (snoRNP)
[Cryptosporidium parvum Iowa II]
gi|323508781|dbj|BAJ77284.1| cgd2_160 [Cryptosporidium parvum]
Length = 359
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 142/365 (38%), Positives = 204/365 (55%), Gaps = 53/365 (14%)
Query: 34 KEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIE 93
KEI IKNK KR+ + +LK +KK+EK K+ + EKR E+ + PRTIE
Sbjct: 40 KEIDLKNIKNKIKRAELANQLKREKKLEKSKRRRENREKEKRGEEV-----VKGIPRTIE 94
Query: 94 NTREPDETVCRP--DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELL 151
NTRE DET +D EL + DEFS + +PK+LITT S F+ E++
Sbjct: 95 NTREIDETFVHDPLNDKELHKEMENDEFSDYFSRKRSPKLLITTNNKASKHMYNFLKEIV 154
Query: 152 SVIPNSHYYKRGTYDLKKIIEYAKKK----DFTSIIVV--HTNRREPDALLIIGLPDGPT 205
S+IPN +YKR +++K II+ +K ++T I++ H ++ P L I LP GPT
Sbjct: 155 SIIPNCDFYKRNGFNIKDIIKEVNEKGTENNYTDILIFTEHPIKKIPWGLYICHLPIGPT 214
Query: 206 AHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 265
++F++ + L +D+K T H PE++LNNF TR+G+R+GR + SLFP +P+F GRRV+
Sbjct: 215 SYFRIRSVKLAQDMKGSAFSTTHNPEVILNNFDTRIGYRIGRQLASLFPFNPDFAGRRVI 274
Query: 266 TFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDA 325
FHNQRDFIFFRH+R YIF K + S
Sbjct: 275 AFHNQRDFIFFRHYR--------------------------------YIFRKKRT-TSTQ 301
Query: 326 NGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSR 385
N ++ +D LQE GPRFTLKL+ +Q GTF+TK G +E++ +P++ +R
Sbjct: 302 NAEEQQDQAINSAG-------LQEIGPRFTLKLMWIQEGTFNTKKGIYEYLWRPDLQVNR 354
Query: 386 RRFFL 390
+ FFL
Sbjct: 355 KVFFL 359
>gi|17534031|ref|NP_495918.1| Protein F44G4.1 [Caenorhabditis elegans]
gi|27924007|sp|P54073.4|YUY1_CAEEL RecName: Full=Brix domain-containing protein F44G4.1
gi|14787708|emb|CAA90124.4| Protein F44G4.1 [Caenorhabditis elegans]
Length = 384
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/367 (39%), Positives = 192/367 (52%), Gaps = 65/367 (17%)
Query: 34 KEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRAL---------ELGEEPP 84
+E+L +K + KH K ++ K LK +KRA ELGE P
Sbjct: 73 QELLEKYEASKATATKTKDDFKHLPKSQRGKALKRALRKDKRARQGERAQIRDELGESAP 132
Query: 85 ARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGP 144
+ P+TIE+ RE D T+ +DDE+ DEF+ + +PK++IT
Sbjct: 133 QKEVPKTIESMREYDATMVNEEDDEVEHDEANDEFAPYFNRETSPKVMITMTPKAKITTF 192
Query: 145 AFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGP 204
F EL IPNS + R LK IIE AK+++FT ++VVH +R++P+ ++ LP+GP
Sbjct: 193 KFCFELQKCIPNSEIFTRKNVLLKTIIEQAKEREFTDLLVVHEDRKKPNGIIFCHLPEGP 252
Query: 205 TAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 264
TA+FK++ L +D+K G T H PE++LNNF TRLGH + R++ LFP P+F GRRV
Sbjct: 253 TAYFKINSLTFTQDLKKFGESTSHFPEVILNNFNTRLGHNIARMLACLFPHDPKFTGRRV 312
Query: 265 VTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSD 324
VTFHNQRD+IFFRHH RY F+ + SK +
Sbjct: 313 VTFHNQRDYIFFRHH--------------------------------RYEFKKEGSKAA- 339
Query: 325 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDT 383
L E GPRFTL+L LQ GTFD K GEFEWV K EM+T
Sbjct: 340 ----------------------LLELGPRFTLRLKWLQKGTFDAKWGEFEWVLKRHEMET 377
Query: 384 SRRRFFL 390
SRRRFFL
Sbjct: 378 SRRRFFL 384
>gi|301792581|ref|XP_002931257.1| PREDICTED: ribosome production factor 1-like, partial [Ailuropoda
melanoleuca]
Length = 227
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/277 (46%), Positives = 162/277 (58%), Gaps = 58/277 (20%)
Query: 116 ADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 175
DEF+S + +PKILITT R +L +VIPNSH Y R LKKII
Sbjct: 7 TDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCT 66
Query: 176 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVL 234
+DFT +IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+IK G +PT HIPE++L
Sbjct: 67 SRDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHIPEIIL 126
Query: 235 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTI 294
NNF TRLGH VGR+ SLFP +P+F GR+V TFHNQRD+IFFR H
Sbjct: 127 NNFTTRLGHSVGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFH--------------- 171
Query: 295 LCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 354
RYIF +++ G +QE GPRF
Sbjct: 172 -----------------RYIFRSEKKVG------------------------IQELGPRF 190
Query: 355 TLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
TLKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 191 TLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 227
>gi|326429539|gb|EGD75109.1| ribosome production factor 1 [Salpingoeca sp. ATCC 50818]
Length = 444
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 139/354 (39%), Positives = 190/354 (53%), Gaps = 62/354 (17%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTRE 97
P I NK +R ++ KHQK+ +K+ + + RD EK + G+ P + P+TIE+ R
Sbjct: 152 PGEIANKLRRKELYKSQKHQKEKDKKARRRQRDMLEK---QYGDAVP-KPKPKTIESMRV 207
Query: 98 PDETVCRPDDDELFAGNDADEFSSILKQGCAPKILIT-TCRFNSNRGPAFISELLSVIPN 156
D T DD+E+ +DEF+S G K+L+T + R F+ EL+++IP+
Sbjct: 208 SDGTEIAADDEEVLGDERSDEFASYF-LGKTSKVLVTLSTNRPFQRTLKFVEELINIIPS 266
Query: 157 SHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLR 216
+ Y KR + LK I+E A + +T++IVV+ N R ++L++ LP GPTAHFKLS +V
Sbjct: 267 ATYRKRNGFPLKTIVEQASARGYTALIVVNQNMRRAESLVMSHLPSGPTAHFKLSSVVWP 326
Query: 217 KDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFF 276
KDI TGH PE++ NF TRLG +V R+ QSLFPQ PEF GR VVTFH QRDFIFF
Sbjct: 327 KDIHGTAKDTGHFPEVLTTNFNTRLGKQVSRMFQSLFPQHPEFTGRSVVTFHCQRDFIFF 386
Query: 277 RHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSE 336
R H RYIF + G
Sbjct: 387 RRH--------------------------------RYIFRDTKRVG-------------- 400
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL SLQ GTFDTK G++E+V K +M R++ +L
Sbjct: 401 ----------LQEIGPQFTLKLQSLQRGTFDTKYGDYEFVAKADMYVDRKKMYL 444
>gi|209878848|ref|XP_002140865.1| ribosome production factor 2 [Cryptosporidium muris RN66]
gi|209556471|gb|EEA06516.1| ribosome production factor 2, putative [Cryptosporidium muris RN66]
Length = 340
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 140/357 (39%), Positives = 196/357 (54%), Gaps = 64/357 (17%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
IKNK +R +K Q+ +EK K K+ E E+ E + PRTIENTRE DE
Sbjct: 41 IKNKVRR----LNIKKQRIIEK-KLAKSSRRRENHKKEMNGEIIEKGIPRTIENTREIDE 95
Query: 101 TVCRP--DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
T + +D EL+ + DEFS + +P +LITTCR S F+ E +++IPN
Sbjct: 96 TYLKDAINDQELYKEMENDEFSDYFLKKRSPHLLITTCRKPSKHMYNFLKEFVAIIPNCD 155
Query: 159 YYKRGTYDLKKII-EYAKKKDFTS----IIVVHTNRREPDALLIIGLPDGPTAHFKLSKL 213
+YKR + +K II E KD T I + H +++P L I LP+GPT++F++ L
Sbjct: 156 FYKRYNFKIKSIIKEINSNKDNTYTDLLIFIEHPVKKQPWGLYICHLPNGPTSYFRMRSL 215
Query: 214 VLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
L +D+K T H PE++LNNF TR+G+R+GR + SLFP +P+F GRRV+TFHNQRDF
Sbjct: 216 KLAQDMKGTAVSTTHNPEIILNNFDTRMGYRIGRQLASLFPFNPDFNGRRVITFHNQRDF 275
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFRH+R YIF+ K++K +
Sbjct: 276 IFFRHYR--------------------------------YIFKQKDNKVTS--------- 294
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
T LQE GPRFTLKL+ LQ GTF+TK G FE++ +P++ +R+ FF+
Sbjct: 295 -----------TGLQEIGPRFTLKLMWLQEGTFNTKQGNFEYIWRPDLQVNRKIFFI 340
>gi|328871991|gb|EGG20361.1| brix domain-containing protein [Dictyostelium fasciculatum]
Length = 315
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 196/369 (53%), Gaps = 61/369 (16%)
Query: 23 KNNENISKKMKKEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEE 82
K +E I K+ + P+ IKNK +R + KL+ Q EK ++ + R K A +LG++
Sbjct: 7 KKDEEIDGKVDIKFTPNEIKNKARRVILWNKLRQQTNKEKSERRRDR---LKEAKKLGDQ 63
Query: 83 PPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITT-CRFNSN 141
PA++ PRTIE R+ DET+ + +D+E+ + DEF+S G PK+ ITT R
Sbjct: 64 APAKLLPRTIERLRKGDETIVQDEDEEVSEDVNLDEFASYF-DGKEPKVCITTNTRPQGR 122
Query: 142 RGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLP 201
F+ + ++PN Y+ R + LK I+++ +D+T ++VV+ + ++++ LP
Sbjct: 123 HITPFVKMIEEILPNCEYFPRKDFKLKDIVKFCANRDYTDLLVVNEDNGVVHTMMMVHLP 182
Query: 202 DGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRG 261
GPT F+++ + + I+N G T H PEL++NNF TRLG VGR+ S+FPQ P F+G
Sbjct: 183 YGPTVQFRVTNITMPDKIENCGKMTSHKPELIINNFTTRLGLTVGRMFASMFPQDPNFKG 242
Query: 262 RRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESK 321
RRVVT HNQRDFIFFRHHR YE
Sbjct: 243 RRVVTLHNQRDFIFFRHHR----------------------------YEF---------- 264
Query: 322 GSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEM 381
A +EK Q E GPRFTLKL+ LQ GTFD GGE+ +HK +M
Sbjct: 265 -----------ASNEKAYLQ-------ELGPRFTLKLMYLQKGTFDATGGEYIHLHKADM 306
Query: 382 DTSRRRFFL 390
D R+ F L
Sbjct: 307 DVDRKTFVL 315
>gi|349802317|gb|AEQ16631.1| putative ribosome production factor 1 [Pipa carvalhoi]
Length = 297
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 133/313 (42%), Positives = 175/313 (55%), Gaps = 59/313 (18%)
Query: 80 GEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFN 139
G++ P + P+TIEN R DET P D+E+ DEF+S + PKILITT
Sbjct: 42 GDKAPPKPVPKTIENQRVYDETTVDPADEEVAYDEATDEFASYFNKQSTPKILITTSDRP 101
Query: 140 SNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIG 199
R F +L ++IPNS Y R LKKII +DFT +IV++ +R+ P+ L++
Sbjct: 102 RGRCVRFTEQLCTIIPNSQVYYRRGLALKKIIPQCLARDFTDLIVINEDRKVPNGLVLCH 161
Query: 200 LPDGPTAHFKLSKLVL-RKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPE 258
LPDGPTAHFK+S + L + K PT H PE++LNNF TRLGH +GR+ SL+P P+
Sbjct: 162 LPDGPTAHFKISNVRLRKGKKKERKEPTEHKPEIILNNFTTRLGHTIGRMFASLYPHDPQ 221
Query: 259 FRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETK 318
FRGR+V TFHNQRD+IFFR+H RYIF+ +
Sbjct: 222 FRGRQVATFHNQRDYIFFRYH--------------------------------RYIFKGE 249
Query: 319 ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK 378
+ G +QE GPRFTLKL SL+ GTFD+K GE+EWVHK
Sbjct: 250 KKVG------------------------IQELGPRFTLKLRSLK-GTFDSKYGEYEWVHK 284
Query: 379 -PEMDTSRRRFFL 390
EMD++RR+F L
Sbjct: 285 RHEMDSNRRKFNL 297
>gi|330794532|ref|XP_003285332.1| brix domain-containing protein [Dictyostelium purpureum]
gi|325084696|gb|EGC38118.1| brix domain-containing protein [Dictyostelium purpureum]
Length = 316
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 148/372 (39%), Positives = 194/372 (52%), Gaps = 61/372 (16%)
Query: 19 KENDKNNENISKKMKKEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALE 78
KE DK++ + +++K P+ IK K KR + KL+ KK + K AR +K
Sbjct: 6 KEEDKDDLS-PEELKLRRSPTDIKCKAKRVLLVQKLQAAKKTAREK---ARKQRKKEREM 61
Query: 79 LGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRF 138
LG+ PA+ PRTIE+ R PD+T+ D+E + DEF S G PK+ ITT +
Sbjct: 62 LGDAAPAKQEPRTIESMRRPDDTMVDDVDEETQEDINKDEFESYF-DGKPPKVCITTNQR 120
Query: 139 NSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLII 198
+ F ++PN+ ++ R Y LK+IIE+ +D+T +IVV+ + D L I
Sbjct: 121 AAKNAVDFAQIFPKLLPNAEFFHRRKYHLKEIIEFCNNRDYTDVIVVNETKGIIDELTIT 180
Query: 199 GLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPE 258
LP GPTA F+L+ LV+ +DI G T H EL++N F TRLG VGR+ S+F Q P
Sbjct: 181 HLPYGPTATFRLTNLVMPEDIPGGGEMTSHKAELIVNGFKTRLGLTVGRIFASIFAQDPN 240
Query: 259 FRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETK 318
F+GRRV T HNQRDFIFFR H RYIFETK
Sbjct: 241 FKGRRVCTLHNQRDFIFFRQH--------------------------------RYIFETK 268
Query: 319 ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK 378
E +AN LQE GPRFTLKL SLQ GTFDT GGE+ VH
Sbjct: 269 E----EAN--------------------LQELGPRFTLKLKSLQKGTFDTSGGEYIHVHH 304
Query: 379 PEMDTSRRRFFL 390
MD R++F L
Sbjct: 305 HNMDVDRKKFVL 316
>gi|167534722|ref|XP_001749036.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772460|gb|EDQ86111.1| predicted protein [Monosiga brevicollis MX1]
Length = 239
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 167/295 (56%), Gaps = 57/295 (19%)
Query: 96 REPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIP 155
RE D+T+ P+DDE+ DE +S G PK+LITT F L ++IP
Sbjct: 2 REKDDTIVDPEDDEVMQDQATDELASYF-DGKEPKVLITTSNKACGDAYQFGEILANMIP 60
Query: 156 NSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVL 215
++ ++KR ++LK II+ A K FT ++V++ ++++ + L++ LPDGPTAHFK++ +
Sbjct: 61 SAQFFKRKGFELKTIIKQAIAKGFTDVMVINEDKKKVNGLVVSHLPDGPTAHFKVTNIKY 120
Query: 216 RKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 275
K+I NHG T H PE+++NNF TRLGH+VGR + +LFPQ PEF GR VVTFHNQRDFIF
Sbjct: 121 AKEIHNHGASTMHYPEVIINNFHTRLGHQVGRQLTALFPQVPEFEGRAVVTFHNQRDFIF 180
Query: 276 FRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKS 335
R H RYIF KE G
Sbjct: 181 VRRH--------------------------------RYIFRNKERVG------------- 195
Query: 336 EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GPRFTLKL SLQ GTFDTK GE+E+V++ E+ T RR+FFL
Sbjct: 196 -----------LQELGPRFTLKLRSLQKGTFDTKFGEYEFVYRSELGTGRRKFFL 239
>gi|66808643|ref|XP_638044.1| brix domain-containing protein [Dictyostelium discoideum AX4]
gi|60466482|gb|EAL64536.1| brix domain-containing protein [Dictyostelium discoideum AX4]
Length = 317
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/354 (38%), Positives = 188/354 (53%), Gaps = 61/354 (17%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTRE 97
P+ IK K KR + KL+ KK + K AR +K LG+ PA+ PRTIE+ R
Sbjct: 24 PTDIKCKAKRVLLVQKLQAAKKTAREK---ARKQRKKEREILGDAAPAKEVPRTIESMRR 80
Query: 98 PDETVCRPDDDELFAGN-DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPN 156
DET+ ++D+ F + DEF S G PKI++TT + ++ F ++PN
Sbjct: 81 ADETIVDTENDKEFEEEINKDEFESYF-DGRVPKIVVTTNQRSTKEAVEFAQVFTKLLPN 139
Query: 157 SHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLR 216
++ R Y LK+I+++ +D+T IIVV+ + D L I LP+GPTA F+L+ LV+
Sbjct: 140 CEFFHRRKYHLKEIVQFCNNRDYTDIIVVNETKGIIDELTISHLPNGPTAVFRLTNLVMP 199
Query: 217 KDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFF 276
+DI G T H EL++NNF TRLGH +GR+ S+F Q P F+GRRV T HNQRDFIFF
Sbjct: 200 EDIPGGGEMTSHKAELIVNNFTTRLGHSIGRMFASMFAQDPNFKGRRVCTLHNQRDFIFF 259
Query: 277 RHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSE 336
R H RYIFE+KE DAN
Sbjct: 260 RQH--------------------------------RYIFESKE----DAN---------- 273
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+QE GPRFTLKL SLQ G+F+T GE+ +H+ MD R++F L
Sbjct: 274 ----------VQELGPRFTLKLKSLQKGSFNTSTGEYIHLHQHNMDVDRKKFVL 317
>gi|321459152|gb|EFX70209.1| hypothetical protein DAPPUDRAFT_228440 [Daphnia pulex]
Length = 336
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 144/358 (40%), Positives = 196/358 (54%), Gaps = 65/358 (18%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S +KNK R+A A LK +K+ K++ K R +K A LG++ P + PRTIENTRE
Sbjct: 38 STMKNKVLRNAQWATLKKEKRKIKKEGQKQR---KKEAEALGDKAPPKQVPRTIENTREA 94
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
D T +D+E+ DE+ + + PKILIT+ ++ FI EL + P S
Sbjct: 95 DVTTVDQEDEEVTFDITHDEYEAYFSKTYEPKILITSSDNPHSKTIHFIRELTKIFPKSE 154
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
R +KK+IE AK+KD+T ++V++ +RR P+ +L+ LPDGPTA+FK+S + L KD
Sbjct: 155 CQWRKRSSVKKMIESAKEKDYTDVVVINEDRRVPNGMLVSHLPDGPTAYFKISNVKLTKD 214
Query: 219 IKNHG---NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 275
+K T H PE++LNNF TRLG V R++ SLF P+F+GRR VTFHNQRD+IF
Sbjct: 215 MKYKNIIKEFTTHRPEVILNNFQTRLGQAVSRMLASLFHYDPQFKGRRAVTFHNQRDYIF 274
Query: 276 FRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKS 335
FRHHR YE +
Sbjct: 275 FRHHR----------------------------YEFK----------------------- 283
Query: 336 EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 390
SQ++ R E GPRFTL+L LQ GTFDT G++EW+ + EM+TSRRRFFL
Sbjct: 284 ---SQKRAALR--ELGPRFTLRLKWLQKGTFDTIEGDYEWIIAGKRHEMETSRRRFFL 336
>gi|255070057|ref|XP_002507110.1| ribosome biogenesis protein RPF1 [Micromonas sp. RCC299]
gi|226522385|gb|ACO68368.1| ribosome biogenesis protein RPF1 [Micromonas sp. RCC299]
Length = 398
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 194/352 (55%), Gaps = 17/352 (4%)
Query: 52 AKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELF 111
KL+ Q EKR KAR L R P+TIEN R DET + D+E+
Sbjct: 51 GKLRQQ---EKRVARKARRIEANNTLTPKLATAPRQVPKTIENQRVRDETHVKDIDEEVV 107
Query: 112 AGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII 171
DEF+ + K++ITT R S F+ + SV+PN +Y+ R Y ++++I
Sbjct: 108 EELAHDEFAKHFSDVTSQKVMITTSRKPSGEMFRFLENIFSVVPNVYYHARRAYHVQEVI 167
Query: 172 EYAKKKDFTSIIVVHTNRR-----EPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT 226
++A + FT ++V + NR+ + + LL + LP GP+ ++LS L L K I+NHG T
Sbjct: 168 KHAVARGFTDLLVFNENRKFGRGAKVNGLLHVHLPVGPSCLYRLSSLALTKTIRNHGRAT 227
Query: 227 GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEF 286
H PEL+LNNF+TRLGHR+GR++ S+FPQ PE +GRRVVTFHNQRDFIFFRHHR + E
Sbjct: 228 KHHPELILNNFSTRLGHRIGRMLMSVFPQRPELQGRRVVTFHNQRDFIFFRHHRYI-FEL 286
Query: 287 ---ISCYMWTILCSYLTSIMKAFCYYECRYIFE--TKESKGSDANGKKAKDAKSEKTSQQ 341
I Y + S+ A E R E + + DA + S
Sbjct: 287 RKGIRQYDQRESDNSTKSVEYAQGSPEGRKPIEAVARNPEIQDAPERITSGRSSCSGDGS 346
Query: 342 KVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTS---RRRFFL 390
RLQE GPRFTLKL+S+Q G FD+K GE+E+V D + RR+F L
Sbjct: 347 NFRARLQELGPRFTLKLLSVQKGVFDSKHGEYEYVRCRRADGNKLDRRKFVL 398
>gi|149597592|ref|XP_001520910.1| PREDICTED: ribosome production factor 1-like, partial
[Ornithorhynchus anatinus]
Length = 227
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/277 (45%), Positives = 163/277 (58%), Gaps = 58/277 (20%)
Query: 116 ADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 175
DEF+S + +PKILITT R F +L +VIPNSH Y R LKKII
Sbjct: 7 TDEFASYFNRQTSPKILITTSDRPRGRTVRFCEQLSTVIPNSHVYYRRGLALKKIIPQCV 66
Query: 176 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN-PTGHIPELVL 234
+DFT ++V++ +R+ P+ L++ LP+GPTAHF++S + LRK+IK G PT H+PE++L
Sbjct: 67 ARDFTDLMVINEDRKVPNGLVLSHLPNGPTAHFRMSSVRLRKEIKRKGKAPTEHLPEVIL 126
Query: 235 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTI 294
NNF TRLGH +GR++ SLFP P+F GR+V TFHNQRD+IFFR H
Sbjct: 127 NNFTTRLGHSIGRMLASLFPHDPQFIGRQVATFHNQRDYIFFRFH--------------- 171
Query: 295 LCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 354
RYIF++++ G +QE GPRF
Sbjct: 172 -----------------RYIFKSEKKVG------------------------IQELGPRF 190
Query: 355 TLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 390
TLKL SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 191 TLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 227
>gi|308798675|ref|XP_003074117.1| Ribosome biogenesis protein RPF1, contains IMP4 domain (ISS)
[Ostreococcus tauri]
gi|116000289|emb|CAL49969.1| Ribosome biogenesis protein RPF1, contains IMP4 domain (ISS)
[Ostreococcus tauri]
Length = 405
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/246 (50%), Positives = 160/246 (65%), Gaps = 8/246 (3%)
Query: 37 LPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTR 96
L S IKNK++RS V+ KL+H++ V K+K+ + R AE A+E GEEP R P+TIEN R
Sbjct: 27 LTSHIKNKQRRSEVYGKLRHERAVAKKKRREERQKAEAAAIEAGEEPAPRQIPKTIENQR 86
Query: 97 EPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPN 156
D T D+E+ + DEF+S PKI++TT R S F+ L +VIPN
Sbjct: 87 VRDATHVEEGDEEVIEQDAEDEFASYFSHATEPKIIVTTSRKPSGAMFKFLENLFTVIPN 146
Query: 157 SHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLR 216
++YY R +Y +++I++ + FT I+V + LL LP+GPT +KLS L L
Sbjct: 147 AYYYARRSYHIQEIVKVRHARGFTDILV--------NGLLHCHLPEGPTCLYKLSSLQLS 198
Query: 217 KDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFF 276
K+IK HG T H PEL+LNNF TRLGHRV R+ S+FPQ PEF+GRRVVTFHNQRDFIFF
Sbjct: 199 KEIKGHGRATSHYPELILNNFTTRLGHRVSRMFASVFPQRPEFKGRRVVTFHNQRDFIFF 258
Query: 277 RHHRCV 282
RHHR V
Sbjct: 259 RHHRYV 264
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 3/51 (5%)
Query: 343 VITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTS---RRRFFL 390
+ RLQE GPRFTL+L+S+Q GTFD++ GE+E++ E D + RR+F L
Sbjct: 355 IQARLQELGPRFTLRLMSVQKGTFDSRHGEYEYIRSTETDGTRKNRRKFVL 405
>gi|303274317|ref|XP_003056480.1| ribosome biogenesis protein RPF1 [Micromonas pusilla CCMP1545]
gi|226462564|gb|EEH59856.1| ribosome biogenesis protein RPF1 [Micromonas pusilla CCMP1545]
Length = 366
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/367 (39%), Positives = 207/367 (56%), Gaps = 42/367 (11%)
Query: 62 KRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSS 121
KR KL R E+ + G E + P+TI+N R ++T + +D ++ DEF+S
Sbjct: 4 KRTKLGRR---EEERIFFGSESNKKRVPKTIDNQRVKNDTFFQENDLDISGEIVEDEFAS 60
Query: 122 ILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTS 181
PK+++TT R S + + SVIPN++YY R +Y +++II ++ + FT
Sbjct: 61 YFVNSTDPKVVLTTSRKPSQEMFRLLQSIFSVIPNAYYYARRSYYIEEIIRHSNARGFTD 120
Query: 182 IIVVHTNRR-----EPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 236
I+V + NR+ + + LL I LP GPT ++LS LV + I+NHG T H PEL+LNN
Sbjct: 121 ILVFNENRKFSKGAKINGLLHIHLPVGPTCLYRLSSLVYSEKIRNHGRSTTHHPELILNN 180
Query: 237 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV-------PLEFISC 289
F+TRLGHR+GR+ S+FPQ PEF+GRRVVTFHNQRDFIFFRHHR V +F++
Sbjct: 181 FSTRLGHRIGRMFASIFPQRPEFQGRRVVTFHNQRDFIFFRHHRYVFEVRNESDEDFLAK 240
Query: 290 YMWTILCSYLTSIMKAFCYYE--CRYIFETKESKGSDANGKKAKDA-------KSEKTSQ 340
+ LC +++++ E C + ESK S + DA KS+ Q
Sbjct: 241 FKADSLCESEQDLVQSYTSAELTCNTQ-KNSESKNSQRRERAFSDAFLPVTEIKSDAHHQ 299
Query: 341 --------------QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTS-- 384
Q + RLQE GPRFTLKL+S+Q GTF++K GE+E+V + S
Sbjct: 300 SRELMINCKHSIERQALRARLQELGPRFTLKLLSIQKGTFNSKHGEYEYVFSGDAGGSKY 359
Query: 385 -RRRFFL 390
RR+F L
Sbjct: 360 DRRKFVL 366
>gi|318087204|gb|ADV40194.1| ribosome production factor 1 [Latrodectus hesperus]
Length = 305
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 192/353 (54%), Gaps = 62/353 (17%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + KLK EK+K KA+ ++A+ GE P ++ P+T+ENTREP
Sbjct: 14 SEIKNKQRRQEEYLKLKR----EKQKIKKAKKKLIQKAIAAGENVPKQV-PKTLENTREP 68
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET+ PDD E+ DEFSS + PK+ IT F EL +I +S
Sbjct: 69 DETMVNPDDQEVQIDQSMDEFSSYYDKKEPPKVFITCSENPHTWTIRFCRELKLLIEDSI 128
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
+ R LKK++E AK + FT+I+VV +RR P +++I LP GPTA F++S + K+
Sbjct: 129 FRYRRRTSLKKLVEEAKSRGFTNIVVVTEDRRHPTGMVVIHLPAGPTAFFRISSVKYIKN 188
Query: 219 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
IKN T H PE+V+NNF TRLG +GRL SLF +P+F GRRVVTFHNQRD+IF RH
Sbjct: 189 IKNRAECTSHKPEIVMNNFRTRLGLSIGRLFTSLFQYNPDFHGRRVVTFHNQRDYIFVRH 248
Query: 279 HRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKT 338
HR YE + +AK A E
Sbjct: 249 HR----------------------------YEFK---------------NEAKVALQE-- 263
Query: 339 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
GPRFTL+L SLQ TFDT GE+EW+ K EM+TSRRRFFL
Sbjct: 264 -----------IGPRFTLRLRSLQKNTFDTMFGEYEWILKRHEMETSRRRFFL 305
>gi|224150509|ref|XP_002336968.1| predicted protein [Populus trichocarpa]
gi|222837476|gb|EEE75855.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/145 (84%), Positives = 132/145 (91%)
Query: 48 SAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDD 107
SAVHAKLKH+KKVEKRKKLKA+D EKRALELGEEPP R PRTIENTRE DETVC+PDD
Sbjct: 5 SAVHAKLKHEKKVEKRKKLKAQDTEEKRALELGEEPPPRKIPRTIENTRENDETVCKPDD 64
Query: 108 DELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDL 167
++LFAGNDADEFSSILK+ PKILITT RFNS RGPAFISELL VIPN+HYYKRGTYDL
Sbjct: 65 EKLFAGNDADEFSSILKRERTPKILITTSRFNSTRGPAFISELLQVIPNAHYYKRGTYDL 124
Query: 168 KKIIEYAKKKDFTSIIVVHTNRREP 192
KKI+ YAKK+DFTS+IVVHTNRREP
Sbjct: 125 KKIVVYAKKQDFTSLIVVHTNRREP 149
>gi|332026181|gb|EGI66323.1| Putative ribosome production factor 1 [Acromyrmex echinatior]
Length = 339
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 136/314 (43%), Positives = 179/314 (57%), Gaps = 64/314 (20%)
Query: 86 RMTPRTIENTREPDET--VCRPDDD---ELFAGNDADEFSSILKQGCAPKILITTCRFNS 140
+ P T+E+ RE DET V DD+ EL + DEF++ +Q PK+LIT +
Sbjct: 81 KQVPHTLESLREKDETMIVGNLDDEANEELKFDCEHDEFAAYYRQEYEPKVLITYADNPN 140
Query: 141 NRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGL 200
+ F EL +IPNS R +KK+++ A ++FT II+V+ N+ +P+ +LII L
Sbjct: 141 RKTRIFGRELTRMIPNSISLYRNRSGVKKMVKSATARNFTDIIIVNENQCKPNGMLIIHL 200
Query: 201 PDGPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEF 259
PDGPTAHFKLS + L D+K NH T H PE++LNNF TRLG +GR++ +LF PEF
Sbjct: 201 PDGPTAHFKLSNVKLTTDLKRNHKEITEHRPEVILNNFTTRLGFTIGRMLGALFHYQPEF 260
Query: 260 RGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKE 319
+GRRVVTFHNQRD+IFFRHH RY F+ K
Sbjct: 261 KGRRVVTFHNQRDYIFFRHH--------------------------------RYEFDLK- 287
Query: 320 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV--- 376
NGK RL+E GPRFTLKL SLQHGTFD+K G++EW+
Sbjct: 288 ------NGK----------------PRLRELGPRFTLKLRSLQHGTFDSKYGDYEWIIQG 325
Query: 377 HKPEMDTSRRRFFL 390
+ EM+TSRR+FFL
Sbjct: 326 RRHEMETSRRKFFL 339
>gi|219119622|ref|XP_002180567.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408040|gb|EEC47975.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 290
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 138/349 (39%), Positives = 185/349 (53%), Gaps = 67/349 (19%)
Query: 50 VHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDE 109
++ K QK+ K++ +R K A LG++ P + P+TI+NTRE + T+ D E
Sbjct: 1 MYGKYLQQKRAAKQE---SRIQRHKEAEALGDDAPPKQAPKTIDNTRELEPTMVL-QDPE 56
Query: 110 LFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKK 169
+ A DEF+ G PK+LITT S FI++L +IP H+Y R +Y +K+
Sbjct: 57 VAADEAEDEFAPYF-NGEKPKVLITTRPRPSQNLFHFIADLQKLIPALHFYPRKSYSVKE 115
Query: 170 IIEYAKKKDFTSIIVVHTNRREPDALLIIGL-------PDGPTAHFKLSKLVLRKDIKNH 222
I +A ++FT +IV+ + + L + L GPTA FK+S +V K I NH
Sbjct: 116 ICSFAANREFTHLIVLSEKSKVCNGLTLSHLRMHDGVAKAGPTAFFKVSNVVTSKKIPNH 175
Query: 223 GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
G T HIPEL L+ F TRLGHR+GRL+ S+FP +F+GR+VVTFHNQRD+IF RHH
Sbjct: 176 GASTSHIPELNLHGFGTRLGHRIGRLLGSVFPHDAQFQGRQVVTFHNQRDYIFVRHH--- 232
Query: 283 PLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQK 342
RYIF E K D
Sbjct: 233 -----------------------------RYIFRELEGKAKD------------------ 245
Query: 343 VITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
LQE GPRFTLKL +Q GTFDT+ GE+EW+HK EMDT+RR+F L
Sbjct: 246 ----LQELGPRFTLKLRWIQEGTFDTQFGEYEWIHKRKEMDTTRRKFHL 290
>gi|340710749|ref|XP_003393948.1| PREDICTED: probable ribosome production factor 1-like [Bombus
terrestris]
Length = 337
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 130/319 (40%), Positives = 178/319 (55%), Gaps = 64/319 (20%)
Query: 81 EEPPARMTPRTIENTREPDETVCRPDDD-----ELFAGNDADEFSSILKQGCAPKILITT 135
+E + P T+E+ RE DET+ D D EL + DEF+ K PK+LI+
Sbjct: 74 QEGGPKQVPHTLESLREKDETIVSGDLDDEENAELKVDFEHDEFAPFYKHAYEPKVLISF 133
Query: 136 CRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDAL 195
C + + F EL +IPNS R +KK+++ A K+FT I++V+ ++ +P+ L
Sbjct: 134 CDNPTRKTRIFGRELTRIIPNSISLYRNRSGVKKMVKSAIAKNFTDIVIVNEDQCKPNGL 193
Query: 196 LIIGLPDGPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP 254
L+I LPDGPTAHFKLS + L D+K +H + H PE++LNNF TRLG +GR++ +LF
Sbjct: 194 LVIHLPDGPTAHFKLSNVKLTVDLKRSHKEISEHRPEVILNNFTTRLGCTIGRMLGALFH 253
Query: 255 QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYI 314
PEF+GRRVVTFHNQRD+IFFRHH RY
Sbjct: 254 YEPEFKGRRVVTFHNQRDYIFFRHH--------------------------------RYQ 281
Query: 315 FETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE 374
F+ + +K RL+E GPRFTLKL SLQHGTFD+K GE+E
Sbjct: 282 FDMERNK-----------------------PRLRELGPRFTLKLQSLQHGTFDSKYGEYE 318
Query: 375 WV---HKPEMDTSRRRFFL 390
W+ + +M+TSRR+FFL
Sbjct: 319 WIIQGKRHDMETSRRKFFL 337
>gi|91078792|ref|XP_969832.1| PREDICTED: similar to CG6712 CG6712-PA [Tribolium castaneum]
gi|270004111|gb|EFA00559.1| hypothetical protein TcasGA2_TC003427 [Tribolium castaneum]
Length = 331
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 176/317 (55%), Gaps = 63/317 (19%)
Query: 82 EPPARMTPRTIENTREPDETVCR---PDDDELFAGN-DADEFSSILKQGCAPKILITTCR 137
E A+ P T+E R DET +++EL + D DEFS +Q PK+LIT
Sbjct: 70 EGGAKKVPHTLETLRLKDETTVEDVNTEENELVRNDFDNDEFSEYYQQSYEPKVLITYSD 129
Query: 138 FNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLI 197
+ F EL +IPNS R +KKII+ A K+++T I+V++ NR EPD LL+
Sbjct: 130 NPLRKTRIFGRELTRIIPNSVSLYRNRSGVKKIIKSATKRNYTDILVINENRHEPDGLLV 189
Query: 198 IGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQS 256
I LP+GPTAHFKLS + + ++ KNH + H PE++LNNF+TRLG +GR++ +LF
Sbjct: 190 IHLPNGPTAHFKLSNVKITTELRKNHKDINDHRPEVILNNFSTRLGLTIGRMLGALFHYE 249
Query: 257 PEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFE 316
PEF GRR VTFHNQRD+IFFRH+R YE
Sbjct: 250 PEFVGRRAVTFHNQRDYIFFRHYR----------------------------YEF----- 276
Query: 317 TKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV 376
D +GKKA RL+E GPRFTLKL SLQ GTFD+K G++EW+
Sbjct: 277 -------DKDGKKA---------------RLKELGPRFTLKLRSLQKGTFDSKYGQYEWI 314
Query: 377 ---HKPEMDTSRRRFFL 390
+ M+TSRR+FFL
Sbjct: 315 IEGRRHAMETSRRKFFL 331
>gi|350406160|ref|XP_003487677.1| PREDICTED: probable ribosome production factor 1-like [Bombus
impatiens]
Length = 339
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/319 (40%), Positives = 177/319 (55%), Gaps = 64/319 (20%)
Query: 81 EEPPARMTPRTIENTREPDETVCRPDDD-----ELFAGNDADEFSSILKQGCAPKILITT 135
+E + P T+E+ RE DET D D EL + DEF+ K PK+LI+
Sbjct: 76 QEGGPKQVPHTLESLREKDETTVSGDIDDEENAELKVDFEHDEFAPFYKHAYEPKVLISF 135
Query: 136 CRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDAL 195
C + + F EL +IPNS R +KK+++ A K+FT I++V+ ++ +P+ L
Sbjct: 136 CDNPTRKTRIFGRELTRIIPNSISLYRNRSGVKKMVKSAIAKNFTDIVIVNEDQCKPNGL 195
Query: 196 LIIGLPDGPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP 254
L+I LPDGPTAHFKLS + L D+K +H + H PE++LNNF TRLG +GR++ +LF
Sbjct: 196 LVIHLPDGPTAHFKLSNVKLTVDLKRSHKEISEHRPEVILNNFTTRLGCTIGRMLGALFH 255
Query: 255 QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYI 314
PEF+GRRVVTFHNQRD+IFFRHH RY
Sbjct: 256 YEPEFKGRRVVTFHNQRDYIFFRHH--------------------------------RYQ 283
Query: 315 FETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE 374
F+ + +K RL+E GPRFTLKL SLQHGTFD+K GE+E
Sbjct: 284 FDMERNK-----------------------PRLRELGPRFTLKLQSLQHGTFDSKYGEYE 320
Query: 375 WV---HKPEMDTSRRRFFL 390
W+ + +M+TSRR+FFL
Sbjct: 321 WIIQGKRHDMETSRRKFFL 339
>gi|340501847|gb|EGR28584.1| RNA processing factor 1, putative [Ichthyophthirius multifiliis]
Length = 342
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/356 (38%), Positives = 189/356 (53%), Gaps = 62/356 (17%)
Query: 36 ILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENT 95
I PS I KEKR V AK + ++K K+K +AR K+ G+E ++ T ++
Sbjct: 48 INPSSIACKEKRLQVLAKKQREQKKLKKKDRQARQEEYKQT---GKE---KLQYLTTDDK 101
Query: 96 REPDETVCRPDDD-ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
+E DE DDD EL + DEFSS + G PKIL+TT + F+ ++ +
Sbjct: 102 KEIDENFIFDDDDLELQNEENIDEFSSYFENGYQPKILMTTSQRPHGELFDFLKDIKNTF 161
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
PNSHYY R +K+I E A K +T +++ ++R+ + L++I LP GPTA FK++
Sbjct: 162 PNSHYYPRKALKIKQICEEAPSKGYTDVMIWREHKRQVNELILIHLPKGPTAIFKVTSDK 221
Query: 215 LRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFI 274
L +I+NHG PT H PEL+LNNF T LG R+GR + +LFPQ PEF+ R V TFHNQRDFI
Sbjct: 222 LNYEIQNHGRPTDHYPELILNNFNTNLGRRIGRFLAALFPQKPEFKARTVATFHNQRDFI 281
Query: 275 FFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAK 334
FFRHHR Y +T G+K +
Sbjct: 282 FFRHHR---------YQFT-------------------------------EEGEKVE--- 298
Query: 335 SEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GPRFT+KL LQ GTFD + GE E+ K +M SR++ F+
Sbjct: 299 ------------LQEIGPRFTMKLKKLQLGTFDYEFGEVEFEAKDKMYQSRKKIFI 342
>gi|340058255|emb|CCC52609.1| putative RNA processing factor 1 [Trypanosoma vivax Y486]
Length = 331
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 129/346 (37%), Positives = 180/346 (52%), Gaps = 60/346 (17%)
Query: 46 KRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCR- 104
K+S + KL+ Q K KR + R+A EK L E+ PA+ P+T E R PD T
Sbjct: 45 KKSLLFEKLREQNKDAKRFR---REAREKERKLLKEDAPAKAIPKTKERMRRPDPTFLES 101
Query: 105 PDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 164
P+D E+ D DEF+S K+G P ILITT R F+ E L + PNS Y R
Sbjct: 102 PNDTEILRDEDDDEFASFFKEGRKPTILITTGEHPCYRTRQFVKEALWLFPNSIYRPRKD 161
Query: 165 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 224
Y LK+I ++ ++FT +IVV +EP +L++ LP GPTA F+LS + +K+
Sbjct: 162 YTLKEITQFCINRNFTDLIVVTDRIKEPHSLIVSHLPTGPTAMFRLSNFLTHAQLKDPAP 221
Query: 225 PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPL 284
T H PEL+ NF+TRLG R+ R+++ LFP + ++ GR V TFHNQRD+IF R H
Sbjct: 222 RTEHYPELIFKNFSTRLGRRIHRMLECLFPATRDYAGRAVATFHNQRDYIFMRTH----- 276
Query: 285 EFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVI 344
RYIF++ E+
Sbjct: 277 ---------------------------RYIFDSLEA------------------------ 285
Query: 345 TRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
R+QE GPRFT++L+SLQ GTFD++ GE+EW K E D + ++L
Sbjct: 286 VRIQEMGPRFTMRLLSLQSGTFDSQFGEYEWFRKKEHDADKLEWYL 331
>gi|307184489|gb|EFN70879.1| Probable ribosome production factor 1 [Camponotus floridanus]
Length = 345
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 128/320 (40%), Positives = 176/320 (55%), Gaps = 65/320 (20%)
Query: 81 EEPPARMTPRTIENTREPDETVCRPDD------DELFAGNDADEFSSILKQGCAPKILIT 134
+E + P TIE+ RE DET+ +D EL + DEF++ +Q PK+LIT
Sbjct: 81 QEGAPKQVPHTIESLREKDETMIVSNDLNDETNQELKVECEHDEFAAYYRQDYEPKVLIT 140
Query: 135 TCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDA 194
+ + F EL +IPNS R +KK+++ A K+FT I++V+ ++ +P+
Sbjct: 141 YADNPNRKTRIFGRELTRIIPNSLSLYRNRSGVKKMVKSAVAKNFTDIVIVNEDQCKPNG 200
Query: 195 LLIIGLPDGPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLF 253
+LII LPDGPTAHFKLS + + ++K NH T H PE++LNNF+TRLG + R++ +LF
Sbjct: 201 MLIIHLPDGPTAHFKLSNVKITTELKRNHKEITEHRPEVILNNFSTRLGFTIARMLGALF 260
Query: 254 PQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRY 313
PEF+GRR VTFHNQRD+IFFRHH RY
Sbjct: 261 HYQPEFKGRRAVTFHNQRDYIFFRHH--------------------------------RY 288
Query: 314 IFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEF 373
F K K RL+E GPRFTLKL SLQHGTFD+K G++
Sbjct: 289 EFNLKTGK-----------------------PRLRELGPRFTLKLRSLQHGTFDSKYGDY 325
Query: 374 EWV---HKPEMDTSRRRFFL 390
EW+ + +M+TSRR+FFL
Sbjct: 326 EWIIQGRRHDMETSRRKFFL 345
>gi|50556604|ref|XP_505710.1| YALI0F21483p [Yarrowia lipolytica]
gi|49651580|emb|CAG78521.1| YALI0F21483p [Yarrowia lipolytica CLIB122]
Length = 293
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 130/351 (37%), Positives = 183/351 (52%), Gaps = 68/351 (19%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I NKEKR V A++KH+ E+ + + R E + EL E+ A P TIE R DE
Sbjct: 10 IANKEKRKKVFAEMKHKLNKERHEMRRERAKEEAKNPELKEKRLAENVPDTIEAKRVYDE 69
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
T+ + + E DEF ++G PK+LITT + + F L +IP S +
Sbjct: 70 TIAQEMEGE-------DEFKEYFEEGKPPKVLITTSKRARGQAYDFADLLYDIIPGSEFK 122
Query: 161 KR-GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
KR G + + +I + ++D+T ++V++ ++++ + L I LP+GPT +F +S L + K+I
Sbjct: 123 KRVGDFTMTQIAKMCAERDYTDLVVINEDKKKVNGLTFIHLPEGPTMYFSVSSLKMPKEI 182
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
K HG T HIPEL+LNNF+TRLG VGRL QS+FPQ PEF GR+VVT HNQRD+IFFR H
Sbjct: 183 KGHGRSTTHIPELILNNFSTRLGKTVGRLFQSMFPQQPEFVGRQVVTLHNQRDWIFFRRH 242
Query: 280 RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS 339
RY+F+ +E G
Sbjct: 243 --------------------------------RYVFKNEERVG----------------- 253
Query: 340 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTL+L LQ G GE EW H+ MD +++F L
Sbjct: 254 -------LQELGPQFTLRLRRLQRGI----RGEVEWEHRSAMDKDKKKFHL 293
>gi|401413642|ref|XP_003886268.1| hypothetical protein NCLIV_066680 [Neospora caninum Liverpool]
gi|325120688|emb|CBZ56243.1| hypothetical protein NCLIV_066680 [Neospora caninum Liverpool]
Length = 403
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 205/386 (53%), Gaps = 69/386 (17%)
Query: 5 RKKSEGEELLNEGEKENDKNNENISKKMKKEILPSMIKNKEKRSAVHAKLKHQKKVEKRK 64
RK+ EE+ ++ K + + +S + I NK++R V +L ++ +K
Sbjct: 87 RKRGSREEVASKVAKPETRTKQPLST--------AGILNKKRRQQVAFQL-----LQAKK 133
Query: 65 KLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILK 124
K +A+ E RA E E + TP+TIE+ R D TV D++E+ ADEF+S
Sbjct: 134 KDRAKKKKETRAKEKRGETVEKKTPKTIESMRRYDPTVVEEDEEEVAGDEAADEFASYFN 193
Query: 125 QGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 184
+ PK++ITT + + +F+ E+L + PN+ +YKRG Y +K I ++A K+ FT +++
Sbjct: 194 REVTPKLMITTNKRVTADMYSFLKEVLYIFPNAFFYKRGPYHIKNICKFAIKQGFTDLLI 253
Query: 185 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 244
P L I+ LP+GPT++F+LS + L +++ T H+PEL+LNNF TRLG R
Sbjct: 254 FKEKNHRPYGLYIVHLPEGPTSYFRLSSVRLAQEMHGGATMTTHLPELLLNNFTTRLGRR 313
Query: 245 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMK 304
V R + +LFP +PEF GRRVVTFHNQRDFIFFRHH
Sbjct: 314 VARQLAALFPLTPEFSGRRVVTFHNQRDFIFFRHH------------------------- 348
Query: 305 AFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 364
RYIFE +GKK TRLQE GPR TLKL+ + G
Sbjct: 349 -------RYIFE---------DGKK---------------TRLQEIGPRLTLKLLWMHAG 377
Query: 365 TFDTKGGEFEWVHKPEMDTSRRRFFL 390
FDTK G +E++ +P+M R+ +
Sbjct: 378 LFDTKEGLYEFIWRPDMKVDRKNMLI 403
>gi|5834783|emb|CAB55338.1| hypothetical protein [Yarrowia lipolytica]
Length = 333
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/351 (37%), Positives = 183/351 (52%), Gaps = 68/351 (19%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I NKEKR V A++KH+ E+ + + R E + EL E+ A P TIE R DE
Sbjct: 50 IANKEKRKKVFAEMKHKLNKERHEMRRERAKEEAKNPELKEKRLAENVPDTIEAKRVYDE 109
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
T+ + + E DEF ++G PK+LITT + + F L +IP S +
Sbjct: 110 TIAQEMEGE-------DEFKEYFEEGKPPKVLITTSKRARGQAYDFADLLYDIIPGSEFK 162
Query: 161 KR-GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
KR G + + +I + ++D+T ++V++ ++++ + L I LP+GPT +F +S L + K+I
Sbjct: 163 KRVGDFTMTQIAKMCAERDYTDLVVINEDKKKVNGLTFIHLPEGPTMYFSVSSLKMPKEI 222
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
K HG T HIPEL+LNNF+TRLG VGRL QS+FPQ PEF GR+VVT HNQRD+IFFR H
Sbjct: 223 KGHGRSTTHIPELILNNFSTRLGKTVGRLFQSMFPQQPEFVGRQVVTLHNQRDWIFFRRH 282
Query: 280 RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS 339
RY+F+ +E G
Sbjct: 283 --------------------------------RYVFKNEERVG----------------- 293
Query: 340 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTL+L LQ G GE EW H+ MD +++F L
Sbjct: 294 -------LQELGPQFTLRLRRLQRGI----RGEVEWEHRSAMDKDKKKFHL 333
>gi|281344700|gb|EFB20284.1| hypothetical protein PANDA_022116 [Ailuropoda melanoleuca]
Length = 215
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/264 (45%), Positives = 151/264 (57%), Gaps = 57/264 (21%)
Query: 116 ADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 175
DEF+S + +PKILITT R +L +VIPNSH Y R LKKII
Sbjct: 8 TDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCT 67
Query: 176 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVL 234
+DFT +IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+IK G +PT HIPE++L
Sbjct: 68 SRDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHIPEIIL 127
Query: 235 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTI 294
NNF TRLGH VGR+ SLFP +P+F GR+V TFHNQRD+IFFR H
Sbjct: 128 NNFTTRLGHSVGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFH--------------- 172
Query: 295 LCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 354
RYIF +++ G +QE GPRF
Sbjct: 173 -----------------RYIFRSEKKVG------------------------IQELGPRF 191
Query: 355 TLKLVSLQHGTFDTKGGEFEWVHK 378
TLKL SLQ GTFD+K GE+EWVHK
Sbjct: 192 TLKLRSLQKGTFDSKYGEYEWVHK 215
>gi|406603252|emb|CCH45231.1| Ribosome production factor 1 [Wickerhamomyces ciferrii]
Length = 291
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/352 (39%), Positives = 181/352 (51%), Gaps = 71/352 (20%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRA-LELGEEPPARMTPRTIENTREPD 99
IKNK+KR + ++K Q+K + R KL+A A E+RA EL +E A P TIE+ R D
Sbjct: 9 IKNKDKRQKLFQRIK-QEKNKARHKLRAERAKEERANPELKQERLANNVPETIESKRVYD 67
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
ETV + + E D+F S G PKIL+TT F L+ +PN +
Sbjct: 68 ETVGQEREGE-------DDFDSYF-DGREPKILLTTNANARKAAYEFADMLMDALPNVTF 119
Query: 160 YKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
KR Y +K I Y + FT +IV++ +++ + + I LP+GPT +F ++ LV K
Sbjct: 120 VKRKREYSMKDISGYCTNRGFTDLIVINEDKKNVNGITFIHLPEGPTFYFSITSLVNGKK 179
Query: 219 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
I+ HG T HIPELVLNNF+TRLG VGRL QSLFPQ PEF GR VVT HNQRDFIFFR
Sbjct: 180 IQGHGTATDHIPELVLNNFSTRLGQTVGRLFQSLFPQKPEFEGRNVVTLHNQRDFIFFRR 239
Query: 279 HRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKT 338
H RY+F +E G
Sbjct: 240 H--------------------------------RYVFRNEEKVG---------------- 251
Query: 339 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL +Q G E EW H+P+MD +R+F+L
Sbjct: 252 --------LQELGPQFTLKLRRVQKGI----KNEIEWEHRPDMDRDKRKFYL 291
>gi|320580314|gb|EFW94537.1| nucleolar ribosomal biogenesis factor RPF1p, putative [Ogataea
parapolymorpha DL-1]
Length = 295
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/351 (38%), Positives = 181/351 (51%), Gaps = 67/351 (19%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
IKNK+KR + AKLK ++ +K K AR E + EL + A P TIEN R DE
Sbjct: 11 IKNKQKRQQLFAKLKDEQNKKKHKIRAARAKEELQNPELKAKRLAENVPNTIENMRVYDE 70
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
TV + EL +D E+ + + PKILITT F S L+ +IPNS +
Sbjct: 71 TV----NTELEGEDDFAEYFT--NREKEPKILITTSPHAKKAAYKFASTLMEIIPNSSFV 124
Query: 161 KRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
KR Y +K + EY +DFT +IV++ +++ + + I LP GPT +F +S L RK I
Sbjct: 125 KRKREYTMKDMSEYCSNRDFTHLIVINEDKKVVNGITFIHLPQGPTFYFSISSLRDRKQI 184
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
HGN T HIPEL+LNNF TRLG VGRL QSL P PE +GR+V+T HNQRD+IFFR H
Sbjct: 185 VGHGNSTEHIPELILNNFTTRLGQTVGRLFQSLLPHKPEIQGRQVITLHNQRDYIFFRMH 244
Query: 280 RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS 339
RY+F+ +E G
Sbjct: 245 --------------------------------RYVFKNEEKVG----------------- 255
Query: 340 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL +Q G + E +W H+P+MD +++F+L
Sbjct: 256 -------LQELGPQFTLKLRRVQRGIKE----EIDWEHRPDMDKEKKKFYL 295
>gi|237836207|ref|XP_002367401.1| RNA processing factor, putative [Toxoplasma gondii ME49]
gi|211965065|gb|EEB00261.1| RNA processing factor, putative [Toxoplasma gondii ME49]
gi|221505910|gb|EEE31545.1| RNA processing factor, putative [Toxoplasma gondii VEG]
Length = 389
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 190/350 (54%), Gaps = 61/350 (17%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I NK++R V +L ++ +KK +A+ E RA E E + P TIE+ R D
Sbjct: 101 ILNKKRRQQVAFQL-----LQAKKKDRAKKKKENRAKERRGETVEKKVPATIESMRRYDP 155
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
TV D++E+ ADEF++ + PK++ITT + + +F+ E+L + PN+ +Y
Sbjct: 156 TVVEEDEEEVEGDEAADEFAAYFNREVTPKLMITTNKRVTADMYSFLKEVLYIFPNAFFY 215
Query: 161 KRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 220
KRG Y +K I ++A K+ FT ++V P L I+ LPDGPT++F+LS + L ++++
Sbjct: 216 KRGPYQIKNICKFAVKQGFTDLLVFKEKNHRPYGLYIVHLPDGPTSYFRLSSVRLAQEMQ 275
Query: 221 NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHR 280
T H+PEL+LNNF TRLG RV R + +LFP +PEF GRRVVTFHNQRDFIFFRHH
Sbjct: 276 GAATMTTHLPELLLNNFTTRLGRRVARQLAALFPLTPEFSGRRVVTFHNQRDFIFFRHH- 334
Query: 281 CVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQ 340
RYIFE +GK+
Sbjct: 335 -------------------------------RYIFE---------DGKR----------- 343
Query: 341 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
TRLQE GPR TLKL+ + G FDT+ G +E++ +P+M R+ +
Sbjct: 344 ----TRLQEIGPRLTLKLLWMHAGLFDTREGLYEFIWRPDMKVDRKNMLI 389
>gi|221485035|gb|EEE23325.1| RNA processing factor, putative [Toxoplasma gondii GT1]
Length = 389
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 190/350 (54%), Gaps = 61/350 (17%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I NK++R V +L ++ +KK +A+ E RA E E + P TIE+ R D
Sbjct: 101 ILNKKRRQQVAFQL-----LQAKKKDRAKKKKENRAKERRGETVEKKVPATIESMRRYDP 155
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
TV D++E+ ADEF++ + PK++ITT + + +F+ E+L + PN+ +Y
Sbjct: 156 TVVEEDEEEVEGDEAADEFAAYFNREVTPKLMITTNKRVTADMYSFLKEVLYIFPNAFFY 215
Query: 161 KRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 220
KRG Y +K I ++A K+ FT ++V P L I+ LPDGPT++F+LS + L ++++
Sbjct: 216 KRGPYQIKNICKFAVKQGFTDLLVFKEKNHRPYGLYIVHLPDGPTSYFRLSSVRLAQEMQ 275
Query: 221 NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHR 280
T H+PEL+LNNF TRLG RV R + +LFP +PEF GRRVVTFHNQRDFIFFRHH
Sbjct: 276 GAATMTTHLPELLLNNFTTRLGRRVARQLAALFPLTPEFSGRRVVTFHNQRDFIFFRHH- 334
Query: 281 CVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQ 340
RYIFE +GK+
Sbjct: 335 -------------------------------RYIFE---------DGKR----------- 343
Query: 341 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
TRLQE GPR TLKL+ + G FDT+ G +E++ +P+M R+ +
Sbjct: 344 ----TRLQEIGPRLTLKLLWMHAGLFDTREGLYEFIWRPDMKVDRKNMLI 389
>gi|313246469|emb|CBY35375.1| unnamed protein product [Oikopleura dioica]
Length = 378
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 120/245 (48%), Positives = 156/245 (63%), Gaps = 11/245 (4%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
IK+K+KR+ ++ L QK+ +K K+ K R A LE GE+ + +TIE+ R+ DE
Sbjct: 121 IKHKQKRTDMYLNLLRQKRRQKMKERKQRKMAR---LESGEKAEEK---KTIESMRKFDE 174
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPA--FISELLSVIPNSH 158
T PDD E+ DE S G PKILI T N+ +GP ELL IPNS
Sbjct: 175 TTVEPDDAEVDWEEQNDELSDYFNNGTVPKILIMTR--NAPKGPMVKMCHELLKTIPNSQ 232
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE-PDALLIIGLPDGPTAHFKLSKLVLRK 217
++ R + LKKII A KK FT++IVV +R+ P+ L II LP GPTAHFK+S + LR+
Sbjct: 233 FFFRQGFALKKIIPQAIKKGFTAMIVVSADRKWVPNDLKIIYLPGGPTAHFKMSSVRLRE 292
Query: 218 DIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
K PT H+PEL+LNNF +RLG R+GR+ +LFPQ PEF GR+VVTFHNQRD+IFFR
Sbjct: 293 KTKGGDTPTTHLPELILNNFKSRLGRRIGRMFAALFPQVPEFEGRQVVTFHNQRDYIFFR 352
Query: 278 HHRCV 282
HR +
Sbjct: 353 QHRYI 357
>gi|367014393|ref|XP_003681696.1| hypothetical protein TDEL_0E02420 [Torulaspora delbrueckii]
gi|359749357|emb|CCE92485.1| hypothetical protein TDEL_0E02420 [Torulaspora delbrueckii]
Length = 293
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 183/351 (52%), Gaps = 66/351 (18%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
IKNK+KR + A+LKHQ E+ +AR E+ E + A P+TIE+ RE DE
Sbjct: 8 IKNKQKRQQLFAELKHQHNKERHTMRRARAKEEREDTEAKSKRLAENVPKTIESMREYDE 67
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
TV + G++ D + PKIL+TT + F + L+ ++PN +
Sbjct: 68 TVTQG-----IEGDEDDLMQYFNNKNEPPKILLTTNVNAKKKAYEFANVLIEILPNVTFI 122
Query: 161 KRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
KR Y LK+I++ ++ FT +++++ ++++ L + LP+GP+ +FK+S V + I
Sbjct: 123 KRKFGYKLKEIVDICNRRGFTDLVIINEDKKKVTGLTFMHLPEGPSFYFKISSYVEVQKI 182
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
HG PT HIPEL+LNNF TRLG VGRL QS+FP++P+F GR+V+T HNQRD+IFFR H
Sbjct: 183 VGHGRPTSHIPELILNNFQTRLGKTVGRLFQSIFPKNPDFEGRQVITLHNQRDYIFFRRH 242
Query: 280 RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS 339
RY+F +E G
Sbjct: 243 --------------------------------RYVFRNEEKVG----------------- 253
Query: 340 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL LQ G + E EW H+PEMD +++F+L
Sbjct: 254 -------LQELGPQFTLKLKRLQRGIKE----ETEWEHRPEMDKEKKKFYL 293
>gi|432853587|ref|XP_004067781.1| PREDICTED: ribosome production factor 1-like [Oryzias latipes]
Length = 346
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/288 (43%), Positives = 161/288 (55%), Gaps = 59/288 (20%)
Query: 106 DDDELFAGNDA-DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 164
+ DE A ++ DEFS+ + P++LITT + F +L SVIPN+H Y R
Sbjct: 115 EKDEXIAFDEGTDEFSAYFNRLTNPQVLITTSDRPRGKTVRFCEQLASVIPNAHVYYRRG 174
Query: 165 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG- 223
LKKII ++FT ++VV+ +R P+ L++ LPDGPTAHFK+S + LRK+IK G
Sbjct: 175 LALKKIIPQCVARNFTYLMVVNEDRLVPNGLVLCHLPDGPTAHFKVSSVRLRKEIKRRGK 234
Query: 224 NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVP 283
+PT H PE++LNNF+TRLGH + RL +LFPQ P F GR+V TFHNQRDFIFFR H
Sbjct: 235 DPTEHSPEVILNNFSTRLGHTIARLFAALFPQDPNFVGRQVATFHNQRDFIFFRFH---- 290
Query: 284 LEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKV 343
RYIF+ ++ G
Sbjct: 291 ----------------------------RYIFKNEKKVG--------------------- 301
Query: 344 ITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
+QE GPRFTLKL SLQ GTFD+K GE+EWV K EMD RR+F L
Sbjct: 302 ---IQELGPRFTLKLRSLQKGTFDSKYGEYEWVLKRHEMDACRRKFQL 346
>gi|300176202|emb|CBK23513.2| unnamed protein product [Blastocystis hominis]
Length = 308
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/356 (38%), Positives = 197/356 (55%), Gaps = 60/356 (16%)
Query: 36 ILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENT 95
++ + IKN++ R + ++KH+KK+EK+K+ ++ K ELGEE + P+T E+
Sbjct: 12 VVINTIKNRQARERLWQQIKHKKKLEKKKRKVEKEKMRK---ELGEEAVPKEVPKTQEDR 68
Query: 96 REPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIP 155
RE D+T+ +DDE+ DEF PKI+ITT R S FISE++++ P
Sbjct: 69 REFDDTLVTQNDDEVHCDEADDEFEPYFSHKLTPKIMITTHRKPSKNAYLFISEVMALFP 128
Query: 156 NSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVL 215
N H ++R + L ++ A ++ FT +IV+ N+R+ ++++I LP GPTA FK++ +
Sbjct: 129 NCHLFEREDHSLVEMCRRAGEEGFTHLIVIGENQRQVNSMVISHLPTGPTAMFKVTSFIP 188
Query: 216 RKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 275
+DI G T H PEL+LNNF TRLG R GR + S+FP +PEF GRRVVTFHNQRD+IF
Sbjct: 189 HEDISGCGAVTDHNPELILNNFNTRLGRRFGRFLGSMFPAAPEFDGRRVVTFHNQRDYIF 248
Query: 276 FRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKS 335
R H RY+FE++ KKAK
Sbjct: 249 VRQH--------------------------------RYVFESE---------KKAK---- 263
Query: 336 EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW-VHKPEMDTSRRRFFL 390
LQE GPRFTLK LQ GTF+T E+EW + +++T RR++FL
Sbjct: 264 -----------LQELGPRFTLKPRYLQVGTFNTLNAEYEWKFNHKQIETGRRKWFL 308
>gi|357615873|gb|EHJ69878.1| hypothetical protein KGM_01538 [Danaus plexippus]
Length = 280
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 129/319 (40%), Positives = 181/319 (56%), Gaps = 64/319 (20%)
Query: 80 GEEPPARMTPRTIENTREPDETVCRPDD----DELFAGNDADEFSSILKQGCAPKILITT 135
G++ P ++ P T+E+ RE DET+ D +E + DE ++ + PK+LIT
Sbjct: 18 GDDVPKKV-PHTLESLREKDETMPANADTEEQEEAQKDMELDEMATYFENAYEPKVLITY 76
Query: 136 CRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDAL 195
+ F EL+ +IPNS R +K+I++ A ++D T +I+V+ N+++P+
Sbjct: 77 SDNPHTKTRTFGRELMKIIPNSLSRYRQRSSVKRIVQSAIREDMTDVIIVNENQKQPNGF 136
Query: 196 LIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP 254
L+I LP GPTAHF+LS + K++ K+H T H PE+VLNNF+TRLG VGR++ +LF
Sbjct: 137 LLIHLPSGPTAHFRLSSCKITKEMNKDHREITNHRPEVVLNNFSTRLGLTVGRMLGALFH 196
Query: 255 QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYI 314
P+F+GRRVVTFHNQRD+IFFRHHR YE
Sbjct: 197 FEPQFKGRRVVTFHNQRDYIFFRHHR----------------------------YEF--- 225
Query: 315 FETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE 374
TKE GK+AK L E GPRFTLKL+SLQ GTFD+K G++E
Sbjct: 226 --TKE-------GKRAK---------------LCELGPRFTLKLISLQQGTFDSKHGDYE 261
Query: 375 WV---HKPEMDTSRRRFFL 390
W+ + +M+TSRRRFFL
Sbjct: 262 WIIAGRRHQMETSRRRFFL 280
>gi|324516931|gb|ADY46675.1| Brix domain-containing protein [Ascaris suum]
Length = 235
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/286 (42%), Positives = 155/286 (54%), Gaps = 56/286 (19%)
Query: 106 DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTY 165
DD+E+ DE SS + PK+LITT + F E+ IPN+ + R
Sbjct: 5 DDEEVLHDEANDEMSSYFNREIKPKVLITTSPYAKVNTFKFCYEMQKCIPNAEVFTRKGI 64
Query: 166 DLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP 225
LKK+++ AK+ ++T +IVVH +R+ P+ +++ LPDGPTA FK++ L KDIK G
Sbjct: 65 ALKKVVKQAKQNEYTDLIVVHEDRKMPNGIVLCHLPDGPTAFFKINSLKFTKDIKRKGET 124
Query: 226 TGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLE 285
T H PE++LNNF TRLGH V R+ LFP P F GRRVVTFHNQRD+IFFRHHR
Sbjct: 125 TSHNPEVILNNFNTRLGHTVARMFACLFPFEPMFTGRRVVTFHNQRDYIFFRHHR----- 179
Query: 286 FISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVIT 345
YE + G+KA
Sbjct: 180 -----------------------YEFK------------REGEKAA-------------- 190
Query: 346 RLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
L E GPRFTL+L LQ GTFDT+ GE+EWV K EM+TSRRRFFL
Sbjct: 191 -LLELGPRFTLRLKWLQKGTFDTRCGEYEWVLKRHEMETSRRRFFL 235
>gi|45190514|ref|NP_984768.1| AEL093Cp [Ashbya gossypii ATCC 10895]
gi|44983456|gb|AAS52592.1| AEL093Cp [Ashbya gossypii ATCC 10895]
gi|374107987|gb|AEY96894.1| FAEL093Cp [Ashbya gossypii FDAG1]
Length = 292
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 131/351 (37%), Positives = 181/351 (51%), Gaps = 67/351 (19%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
IKNK KR + A+LK ++ E+ K + R E+ L EE + P+TI++ R DE
Sbjct: 8 IKNKMKRKQLFAELKDKQNKERHKMRRLRAKEERENPALKEERLEKNVPKTIDSMRVFDE 67
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
++ + + E DE + G PKIL+TT + F + L+ V+PN +
Sbjct: 68 SIGQDVEGE------QDELQAFFNSGEPPKILLTTNVNARKKAYEFANVLIEVLPNVTFV 121
Query: 161 KRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
KR Y LK+I E+ +++T ++V++ +++E L I LP GP+ +FKLS V + I
Sbjct: 122 KRKFGYKLKEIAEFCNNRNYTDLVVINEDKKEVTGLTFIHLPAGPSFYFKLSSYVEVEKI 181
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
HG PT HIPEL+LNNF+TRLG VGRL QS+FPQSP+ GR+V+T HNQRD+IFFR H
Sbjct: 182 HGHGRPTSHIPELILNNFSTRLGKTVGRLFQSIFPQSPDIEGRQVITLHNQRDYIFFRRH 241
Query: 280 RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS 339
RYIF +E G
Sbjct: 242 --------------------------------RYIFRNEEKVG----------------- 252
Query: 340 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL LQ G + E EW +KPEMD ++RF L
Sbjct: 253 -------LQELGPQFTLKLRRLQRGIKE----ETEWEYKPEMDKDKKRFHL 292
>gi|383850576|ref|XP_003700871.1| PREDICTED: probable ribosome production factor 1-like [Megachile
rotundata]
Length = 337
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/319 (40%), Positives = 176/319 (55%), Gaps = 64/319 (20%)
Query: 81 EEPPARMTPRTIENTREPDETVCRPDDD-----ELFAGNDADEFSSILKQGCAPKILITT 135
+E + P TIE+ RE DET D D EL + DEF+S + PK+LIT
Sbjct: 74 QEGGPKQVPHTIESLREKDETTVTGDIDDEENQELKIDFEHDEFASYYRHDYEPKVLITY 133
Query: 136 CRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDAL 195
+ + F EL +IPNS R +KK+++ A K+FT IIVV+ ++ +P+ +
Sbjct: 134 ADNPTRKTRIFGVELTRIIPNSISLYRNRSGVKKMVKSAIAKNFTDIIVVNEDQCKPNGM 193
Query: 196 LIIGLPDGPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP 254
L+I LPDGPTA+FKLS + + ++K +H T H PE++LNNF TRLG +GR++ +LF
Sbjct: 194 LVIHLPDGPTAYFKLSNVKITPELKRSHKEITTHRPEVILNNFTTRLGCTIGRMLGALFH 253
Query: 255 QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYI 314
PEF+GRRVVTFHNQRD+IFFRHH RY
Sbjct: 254 YQPEFKGRRVVTFHNQRDYIFFRHH--------------------------------RYQ 281
Query: 315 FETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE 374
F+ ++K RL+E GPRFTL+L LQHGTFDTK G++E
Sbjct: 282 FDFNKNK-----------------------PRLRELGPRFTLRLKYLQHGTFDTKYGDYE 318
Query: 375 WV---HKPEMDTSRRRFFL 390
W+ + +M+TSRR+FFL
Sbjct: 319 WLIQGRRHDMETSRRKFFL 337
>gi|195578679|ref|XP_002079191.1| GD22130 [Drosophila simulans]
gi|194191200|gb|EDX04776.1| GD22130 [Drosophila simulans]
Length = 392
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 199/359 (55%), Gaps = 72/359 (20%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S+++NKE+R A++ K+K +K +K ++ +AR A PA TIE+ RE
Sbjct: 99 SLMRNKEQRLALYKKMKKEKHKKKMQERRARRKAGV---------PAN-PGHTIESLREK 148
Query: 99 DET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
D+T + D++EL + D+FSS ++ PK+LIT + F EL +
Sbjct: 149 DQTEVANLNDSDNEELQKELELDDFSSYFERSYEPKVLITFADNPVTKTRKFGLELSRIF 208
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
PN+ R +KKI + A++++FT +++V+ +RR+P+ LL+I LP+GPTAHFKLS +
Sbjct: 209 PNALVKIRNKSSVKKICKSAEREEFTDVVIVNEDRRKPNGLLVIHLPNGPTAHFKLSNVK 268
Query: 215 LRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
L DIK +H T H PE++LNNF TRLG VGR++ +LF PEFRGRR VTFHNQRD+
Sbjct: 269 LTSDIKRDHKEITKHRPEVILNNFTTRLGLTVGRMLGALFHHDPEFRGRRAVTFHNQRDY 328
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFRHHR YE TKE GK+ K
Sbjct: 329 IFFRHHR----------------------------YEF-----TKE-------GKRVK-- 346
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 390
L+E GPRFTLKL SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 347 -------------LRELGPRFTLKLRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 392
>gi|294659883|ref|XP_002770660.1| DEHA2G17688p [Debaryomyces hansenii CBS767]
gi|199434306|emb|CAR65993.1| DEHA2G17688p [Debaryomyces hansenii CBS767]
Length = 293
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 136/355 (38%), Positives = 187/355 (52%), Gaps = 76/355 (21%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRA-LELGEEPPARMTPRTIENTREPD 99
IKNK+KRS + A LK Q+K++ R KL+ A E+R+ EL EE A P TIE+ R D
Sbjct: 10 IKNKQKRSKLFADLK-QEKIKARHKLRNERAKEERSNPELKEERLAANIPETIESKRVFD 68
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSN-RGPA--FISELLSVIPN 156
ET+ + + E DEF PKIL+TT N+N + PA F L+ +PN
Sbjct: 69 ETITQEVEGE-------DEFDQYFASSQEPKILLTT---NANAKKPAYEFADLLMDFLPN 118
Query: 157 SHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVL 215
+ KR + ++ + ++ K +D+T ++V++ +++ L I LP+GPT +F ++ L
Sbjct: 119 VTFVKRKREFSMQDMAKFCKNRDYTDLVVINEDKKVVTGLTFIHLPEGPTFYFSVTSLTE 178
Query: 216 RKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 275
K I HG T HIPEL+LNNF TRLG VGRL QSLFP PEF+GR+V+T HNQRD+IF
Sbjct: 179 GKKIAGHGRATDHIPELILNNFNTRLGKTVGRLFQSLFPHKPEFQGRQVITLHNQRDYIF 238
Query: 276 FRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKS 335
FR H RYIF +E G
Sbjct: 239 FRRH--------------------------------RYIFRNEEKVG------------- 253
Query: 336 EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL LQ G D + EW H+P+M+ +R+F+L
Sbjct: 254 -----------LQELGPQFTLKLRRLQKGIKD----DVEWEHRPDMERDKRKFYL 293
>gi|413950307|gb|AFW82956.1| hypothetical protein ZEAMMB73_160675 [Zea mays]
Length = 146
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 117/172 (68%), Gaps = 35/172 (20%)
Query: 219 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
+ NHGNPT H PELVLNNF TRLGHRVGR+IQSLFPQ P FRGRRVVTFHNQRD+IFFRH
Sbjct: 10 VHNHGNPTSHKPELVLNNFTTRLGHRVGRMIQSLFPQDPNFRGRRVVTFHNQRDYIFFRH 69
Query: 279 HRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKT 338
H RYIFETKE K + + SEK
Sbjct: 70 H--------------------------------RYIFETKEKKVASKEKTSGSKSGSEK- 96
Query: 339 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
Q+VI RLQECGPRFTLKL++LQHGTFDT+ GE+EWVHKP+MDTSRRRFFL
Sbjct: 97 --QQVICRLQECGPRFTLKLLTLQHGTFDTRSGEYEWVHKPDMDTSRRRFFL 146
>gi|307201740|gb|EFN81419.1| Probable ribosome production factor 1 [Harpegnathos saltator]
Length = 288
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/319 (40%), Positives = 175/319 (54%), Gaps = 64/319 (20%)
Query: 81 EEPPARMTPRTIENTREPDETVC-----RPDDDELFAGNDADEFSSILKQGCAPKILITT 135
+E + P T+E+ RE DET D+ EL DEF++ +Q PK+LIT
Sbjct: 25 QEGRPKQIPHTLESLREKDETTIVGDLEDADNLELKVECQNDEFAAYYRQDYEPKVLITY 84
Query: 136 CRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDAL 195
+ + F EL +IPNS R +KKI+ A K+FT II+V+ ++ +P+ +
Sbjct: 85 ADNPNRKTRIFGRELTRMIPNSISLYRNRSGVKKIVRSAITKNFTDIIIVNEDQCKPNGM 144
Query: 196 LIIGLPDGPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP 254
L+I LPDGPTAHFKLS + + ++K +H T H PE+++NNF TRLG V R++ +LF
Sbjct: 145 LVIHLPDGPTAHFKLSNVKITTELKRSHKEITEHRPEVIINNFTTRLGFTVARMLGALFH 204
Query: 255 QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYI 314
P+F+GRRVVTFHNQRD+IFFRHH RY
Sbjct: 205 YQPQFKGRRVVTFHNQRDYIFFRHH--------------------------------RYE 232
Query: 315 FETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE 374
F K NGK RL+E GPRFTL+L SLQHGTFD+K G++E
Sbjct: 233 FNLK-------NGKP----------------RLRELGPRFTLRLKSLQHGTFDSKYGDYE 269
Query: 375 WV---HKPEMDTSRRRFFL 390
W+ + +M+TSRR+FFL
Sbjct: 270 WIIQGRRHDMETSRRKFFL 288
>gi|401625440|gb|EJS43449.1| rpf1p [Saccharomyces arboricola H-6]
Length = 295
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/357 (37%), Positives = 181/357 (50%), Gaps = 77/357 (21%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I NK KR V A +KH+K E+ + R E+ EL E+ + +TIENTR DE
Sbjct: 9 ITNKLKRQEVFADIKHEKNKERHTMRRKRAKEERENPELREQRLKQNVTQTIENTRVYDE 68
Query: 101 TVCRP---DDDEL---FAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
T+ + D+D+L F GN + PKI +TT F + L+ V+
Sbjct: 69 TINKEVEGDEDDLMRYFNGNSNE----------PPKIFLTTNVNAKKSAYEFANILIEVL 118
Query: 155 PNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKL 213
PN + KR Y LK+I + K++FT I++++ ++++ L I LP+GPT +FKLS
Sbjct: 119 PNVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSF 178
Query: 214 VLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
V K I HG PT HIPEL+LNNF TRLG VGRL QS+ PQ+P+ GR+VVT HNQRD+
Sbjct: 179 VEVKKIAGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVVTLHNQRDY 238
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFR H RY+F+ E G
Sbjct: 239 IFFRRH--------------------------------RYVFKDNERVG----------- 255
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL LQ G + E EW HKPEMD +++F+L
Sbjct: 256 -------------LQELGPQFTLKLKRLQRGIKE----ETEWEHKPEMDKEKKKFYL 295
>gi|365984503|ref|XP_003669084.1| hypothetical protein NDAI_0C01800 [Naumovozyma dairenensis CBS 421]
gi|343767852|emb|CCD23841.1| hypothetical protein NDAI_0C01800 [Naumovozyma dairenensis CBS 421]
Length = 294
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/356 (36%), Positives = 183/356 (51%), Gaps = 75/356 (21%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I+NK+KR + A+LK QK E+ + R E+ EL E+ +TI+N R DE
Sbjct: 8 IRNKQKRQQLFAELKDQKNKERHTMRRQRAKEERENPELKEKRLKENVTKTIDNMRVFDE 67
Query: 101 TVCRP---DDDEL--FAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIP 155
T+ +P D+D+L F N+ E PKI +TT F + L+ V+P
Sbjct: 68 TINQPIEGDEDDLLQFFNNNNSE---------PPKIFLTTNVNARKCAYEFANVLIEVLP 118
Query: 156 NSHYYKRGT-YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
N + KR Y +K+I++ K++FT +++++ ++++ L I LP+GP+ +FKLS V
Sbjct: 119 NVTFVKRKYGYKMKEIVDICNKRNFTDMVIINEDKKKVTGLTFIHLPEGPSFYFKLSSYV 178
Query: 215 LRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFI 274
K I HG PT HIPEL+LNNF TRLG VG+L QS+FP PEF GR+V+T HNQRD+I
Sbjct: 179 EVKKIVGHGRPTSHIPELILNNFQTRLGKTVGKLFQSIFPNDPEFEGRQVITLHNQRDYI 238
Query: 275 FFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAK 334
FFR H RY+F +E G
Sbjct: 239 FFRRH--------------------------------RYVFRNEEKVG------------ 254
Query: 335 SEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL LQ G + E EW HKPEMD +++F+L
Sbjct: 255 ------------LQELGPQFTLKLKRLQRGIKE----ETEWEHKPEMDKEKKKFYL 294
>gi|380014671|ref|XP_003691346.1| PREDICTED: probable ribosome production factor 1-like [Apis florea]
Length = 335
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/319 (38%), Positives = 176/319 (55%), Gaps = 64/319 (20%)
Query: 81 EEPPARMTPRTIENTREPDETVCRPDDD-----ELFAGNDADEFSSILKQGCAPKILITT 135
+E + P TIE+ RE DET+ + D EL + DEF++ K PK+LIT
Sbjct: 72 QEGVPKQVPHTIESLREKDETIVTGNLDDEENAELKVDFEHDEFAAYYKHTYEPKVLITY 131
Query: 136 CRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDAL 195
C + + F EL +IPNS R +KK+++ A ++FT II+++ ++ +P+ +
Sbjct: 132 CDNPTRKTRIFGVELTRIIPNSISLYRNRSGVKKMVKSAIARNFTDIIIINEDQCKPNGM 191
Query: 196 LIIGLPDGPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP 254
LII LPDGPTAHFKLS + + ++K +H + H PE++L NF TRLG +GR++ +LF
Sbjct: 192 LIIHLPDGPTAHFKLSNVKITPELKRSHKEISKHRPEVILTNFTTRLGCTIGRMLGALFH 251
Query: 255 QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYI 314
PEF+G RVVTFHNQRD+IFFRHH RY
Sbjct: 252 YQPEFKGSRVVTFHNQRDYIFFRHH--------------------------------RYQ 279
Query: 315 FETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE 374
F+ + +K RL+E GPRFTL+L SLQ GTFD+K GE+E
Sbjct: 280 FDLETAK-----------------------PRLRELGPRFTLRLKSLQQGTFDSKHGEYE 316
Query: 375 WV---HKPEMDTSRRRFFL 390
W+ + +M+TSRR+FFL
Sbjct: 317 WLIQGKRHDMETSRRKFFL 335
>gi|428178207|gb|EKX47083.1| hypothetical protein GUITHDRAFT_137695 [Guillardia theta CCMP2712]
Length = 316
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 170/311 (54%), Gaps = 60/311 (19%)
Query: 86 RMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPA 145
+ PRT+EN RE DET+ +D+E+ + DEF G P+ +ITT S
Sbjct: 60 KQVPRTLENMREADETIMESEDEEIRRDEEEDEFRKYF-DGEPPRTIITTNNHPSKPLIE 118
Query: 146 FISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHT------NRREPDALLIIG 199
+ LL +IP S+YY R Y++K I ++A ++ FT++I++ +++ P ++L+I
Sbjct: 119 LVKSLLVLIPGSYYYSRRNYNIKDICKWAGERGFTNLIILGQGLQLGGHKKLPCSMLLIH 178
Query: 200 LPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEF 259
LP+GPT HF+LS + L IKNH T H PEL+LNNF TRLG RV R SLFPQ P+F
Sbjct: 179 LPEGPTLHFRLSSVKLPDQIKNHARATKHKPELILNNFTTRLGQRVSRAFSSLFPQDPQF 238
Query: 260 RGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKE 319
GRRVVTFH QRD++F RHH RYIF
Sbjct: 239 TGRRVVTFHCQRDYVFVRHH--------------------------------RYIFP--- 263
Query: 320 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 379
D G+KA RLQE GP+FTLKL S+Q GTFD+ GE+EW+HK
Sbjct: 264 ---DDKQGEKA---------------RLQEIGPKFTLKLKSMQAGTFDSSRGEYEWIHKK 305
Query: 380 EMDTSRRRFFL 390
E S+++F L
Sbjct: 306 ENLGSKKKFAL 316
>gi|260941712|ref|XP_002615022.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238851445|gb|EEQ40909.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 298
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/358 (36%), Positives = 182/358 (50%), Gaps = 70/358 (19%)
Query: 35 EILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIEN 94
EIL + IKNK++R V A L+ +K E+ K AR E+ +L E A P TIE+
Sbjct: 9 EILKT-IKNKQRRQKVFAALQAEKSKERHKARAARAKEERENPQLKAERLAANVPETIES 67
Query: 95 TREPDETVCRPDDDELFAGNDADEFSSILKQGC-APKILITTCRFNSNRGPAFISELLSV 153
R DET+ DE+ DEF + + PK+L+TT F L+
Sbjct: 68 KRVYDETIA----DEV---EGEDEFFELFNRTQRDPKVLLTTNAGAKKNAYEFADILMEF 120
Query: 154 IPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSK 212
+PN + KR Y +K + +Y +DFT +IV++ ++++ + L I LP+GPT +F +S
Sbjct: 121 VPNVTFVKRKREYSMKDMAQYCTNRDFTDLIVINEDKKKVNGLTFIHLPEGPTFYFSVSS 180
Query: 213 LVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRD 272
LV + IK HG T HIPEL+LNNF TRLG VGRL Q++FP PE +GR+V+T HNQRD
Sbjct: 181 LVTTERIKGHGRATSHIPELILNNFNTRLGKTVGRLFQAIFPAQPEIQGRQVLTLHNQRD 240
Query: 273 FIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKD 332
+IFFR H RY+F +E G
Sbjct: 241 YIFFRRH--------------------------------RYVFRNEEKVG---------- 258
Query: 333 AKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL LQ G D E EW H+P+M+ +R+F+L
Sbjct: 259 --------------LQELGPQFTLKLRRLQKGIKD----EVEWEHRPDMERDKRKFYL 298
>gi|157108216|ref|XP_001650128.1| U3 small nucleolar ribonucleoprotein protein imp4 [Aedes aegypti]
gi|108879363|gb|EAT43588.1| AAEL004997-PA [Aedes aegypti]
Length = 417
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 193/359 (53%), Gaps = 72/359 (20%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
+ IKNKE RS K K+++ KK + + A + R LE G + T TIE+ RE
Sbjct: 124 NFIKNKEIRS------KKFKRLQGSKKKEEKAARKARKLEGG----PKTTGHTIESLREK 173
Query: 99 DET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
D+T V D++E+ + DEF+ K+ PK+LIT R F +EL ++
Sbjct: 174 DQTSLANVTEDDNEEIANDLENDEFNEYYKKTYEPKVLITYSATPHTRTRKFAAELERIL 233
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
PNS + R LK + + A +++FT +IV++ N+++P+ LL+I LP+GPTAHFK+S
Sbjct: 234 PNSLVHARNKARLKNVCKSAIREEFTDLIVINENKKQPEGLLVIHLPEGPTAHFKISNFK 293
Query: 215 LRKDIKNH-GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
KD+K N T H PE++L NF+TRLG +GR++ +LF PEF+GRRV TFHNQRD+
Sbjct: 294 SLKDLKKRPSNITSHRPEVILTNFSTRLGLTIGRMLGALFHYEPEFKGRRVATFHNQRDY 353
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFRHH YE D NGK+ K
Sbjct: 354 IFFRHH----------------------------LYEF------------DKNGKRVK-- 371
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 390
L+E GPRFTLKL SLQ G FD+K G++EW+ +K SRRRFFL
Sbjct: 372 -------------LRELGPRFTLKLRSLQQGLFDSKCGDYEWMITNKRHQMESRRRFFL 417
>gi|366996156|ref|XP_003677841.1| hypothetical protein NCAS_0H01830 [Naumovozyma castellii CBS 4309]
gi|342303711|emb|CCC71493.1| hypothetical protein NCAS_0H01830 [Naumovozyma castellii CBS 4309]
Length = 294
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 182/355 (51%), Gaps = 73/355 (20%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I+NK+KR + A+LK QK E+ + R E+ EL E+ +TI+N R DE
Sbjct: 8 IQNKQKRQQLFAELKDQKNKERHSMRRTRAKEERANPELKEKRLKENVTKTIDNMRVYDE 67
Query: 101 TVCRP----DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPN 156
T+ + +DD + ND + G PKI +TT F + L+ V+PN
Sbjct: 68 TIQKEVEGDEDDLMRFFND--------RNGEPPKIFLTTNVNARKCAYEFANVLIEVLPN 119
Query: 157 SHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVL 215
+ KR Y LK+I + K++FT +++++ ++++ L I LP+GP+ +FKLS V
Sbjct: 120 VTFVKRKFGYTLKEIADICNKRNFTDVVIINEDKKKVTGLTFIHLPEGPSFYFKLSSYVE 179
Query: 216 RKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 275
K I HG PT H+PEL+LNNF TRLG VGRL QS+FPQ+PEF GR+V+T HNQRD+IF
Sbjct: 180 VKKIVGHGRPTSHVPELILNNFQTRLGKTVGRLFQSIFPQNPEFEGRQVITLHNQRDYIF 239
Query: 276 FRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKS 335
FR H RY+F +E G
Sbjct: 240 FRRH--------------------------------RYVFRNEEKVG------------- 254
Query: 336 EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL LQ G + E EW H+PEMD +++F+L
Sbjct: 255 -----------LQELGPQFTLKLKRLQRGIKE----ETEWEHRPEMDKEKKKFYL 294
>gi|17137746|ref|NP_477479.1| CG6712 [Drosophila melanogaster]
gi|71153717|sp|Q9VKB4.1|RPF1_DROME RecName: Full=Probable ribosome production factor 1; AltName:
Full=Ribosome biogenesis protein RPF1
gi|7297917|gb|AAF53162.1| CG6712 [Drosophila melanogaster]
gi|15291677|gb|AAK93107.1| LD23405p [Drosophila melanogaster]
gi|220945866|gb|ACL85476.1| CG6712-PA [synthetic construct]
gi|220955634|gb|ACL90360.1| CG6712-PA [synthetic construct]
Length = 394
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 197/359 (54%), Gaps = 72/359 (20%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S ++NKE+R A++ K+K +K +K ++ +AR A A P TIE+ RE
Sbjct: 101 SWMRNKEQRLALYKKMKKEKHKKKMQERRARRKAGVPA------NPGH----TIESLREK 150
Query: 99 DET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
D+T + D++EL D+FSS ++ PK+LIT + F EL +
Sbjct: 151 DQTEVANLNDSDNEELQKELQLDDFSSYFERSYEPKVLITFADNPVTKTRKFGLELSRIF 210
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
PN+ R +KKI + A++++FT +++V+ +RR+P+ LL+I LP+GPTAHFKLS +
Sbjct: 211 PNALVKIRNKSSVKKICKSAEREEFTDVVIVNEDRRKPNGLLVIHLPNGPTAHFKLSNVK 270
Query: 215 LRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
L DIK +H T H PE++LNNF TRLG VGR++ +LF PEFRGRR VTFHNQRD+
Sbjct: 271 LTSDIKRDHKEITKHRPEVILNNFTTRLGLTVGRMLGALFHHDPEFRGRRAVTFHNQRDY 330
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFRHHR YE TKE GK+ K
Sbjct: 331 IFFRHHR----------------------------YEF-----TKE-------GKRVK-- 348
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 390
L+E GPRFTLKL SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 349 -------------LRELGPRFTLKLRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 394
>gi|195443000|ref|XP_002069227.1| GK21080 [Drosophila willistoni]
gi|194165312|gb|EDW80213.1| GK21080 [Drosophila willistoni]
Length = 392
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 141/359 (39%), Positives = 195/359 (54%), Gaps = 72/359 (20%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S++KNKE+R A++ K+K +K +K ++ +AR A PA TIE+ RE
Sbjct: 99 SLMKNKEQRMALYRKMKKEKHKKKMQERRARRKAG---------IPAN-PGHTIESLREK 148
Query: 99 DET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
D+T + D++EL D+FSS ++ PK+LIT + F EL +
Sbjct: 149 DQTEVGDLNDSDNEELQKELQLDDFSSYFERSYEPKVLITFADNPVTKTRKFGLELSRIF 208
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
PN+ R +KKI + A++++FT +++V+ +RR+P+ LL+I LP+GPTAHFKLS +
Sbjct: 209 PNALVKIRNKSSVKKICKSAEREEFTDVVIVNEDRRKPNGLLMIHLPNGPTAHFKLSNVK 268
Query: 215 LRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
L DIK +H T H PE++L NF TRLG VGR++ +LF PEFRGRR VTFHNQRD+
Sbjct: 269 LTSDIKRDHKEITKHRPEVILTNFTTRLGLTVGRMLGALFHHDPEFRGRRAVTFHNQRDY 328
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFRHHR YE + GK+ K
Sbjct: 329 IFFRHHR----------------------------YEF------------NKEGKRVK-- 346
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 390
L+E GPRFTLKL SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 347 -------------LRELGPRFTLKLRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 392
>gi|384486606|gb|EIE78786.1| hypothetical protein RO3G_03491 [Rhizopus delemar RA 99-880]
Length = 219
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 159/285 (55%), Gaps = 72/285 (25%)
Query: 107 DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT-Y 165
DDE+ DE SS G PKIL+TT +L+S+ P + + KRG +
Sbjct: 6 DDEVAQDEALDELSSYFS-GKTPKILVTT-------------KLVSMFPEAQFAKRGPKH 51
Query: 166 DLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP 225
+L+++I+ AK+K+FT +++V+ +R+ P+A+ +I LPDGPTA+FKL+ K I NHG
Sbjct: 52 ELRQVIKIAKEKEFTDLLIVNEDRKVPNAITLIHLPDGPTAYFKLTNFTPSKHILNHGRV 111
Query: 226 TGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLE 285
T H PEL+LNNF TRLGH VGR+ Q+L PQ PEF+GR+V+TFHNQRDFIF R H
Sbjct: 112 TAHNPELILNNFNTRLGHTVGRMFQALLPQVPEFQGRQVITFHNQRDFIFVRRH------ 165
Query: 286 FISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVIT 345
RY+F E G
Sbjct: 166 --------------------------RYVFRDTEKVG----------------------- 176
Query: 346 RLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL LQ G + + GE+EW+ KPEM+TSR++FFL
Sbjct: 177 -LQELGPKFTLKLRWLQKGVYQ-RDGEYEWLFKPEMETSRKKFFL 219
>gi|195472311|ref|XP_002088444.1| GE12424 [Drosophila yakuba]
gi|194174545|gb|EDW88156.1| GE12424 [Drosophila yakuba]
Length = 393
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 198/359 (55%), Gaps = 72/359 (20%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S+++NKE+R A++ K+K +K +K ++ +AR A A P TIE+ RE
Sbjct: 100 SLMRNKEQRLALYKKMKKEKHKKKMQERRARRKAGVPA------NPGH----TIESLREK 149
Query: 99 DET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
D+T + D++EL + D+FSS ++ PK+LIT + F EL +
Sbjct: 150 DQTEVANLNDSDNEELQKELEMDDFSSYFERSYEPKVLITFADNPVTKTRKFGLELSRIF 209
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
PN+ R +KKI + A++++FT +++V+ +RR+P+ LL+I LP+GPTAHFKLS +
Sbjct: 210 PNALVKIRNKSSVKKICKSAEREEFTDVVIVNEDRRKPNGLLVIHLPNGPTAHFKLSNVK 269
Query: 215 LRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
L DIK +H T H PE++L NF TRLG VGR++ +LF PEFRGRR VTFHNQRD+
Sbjct: 270 LTSDIKRDHKEITKHRPEVILTNFTTRLGLTVGRMLGALFHHDPEFRGRRAVTFHNQRDY 329
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFRHHR YE TKE GK+ K
Sbjct: 330 IFFRHHR----------------------------YEF-----TKE-------GKRVK-- 347
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 390
L+E GPRFTLKL SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 348 -------------LRELGPRFTLKLRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 393
>gi|195350997|ref|XP_002042023.1| GM26329 [Drosophila sechellia]
gi|194123847|gb|EDW45890.1| GM26329 [Drosophila sechellia]
Length = 392
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 198/359 (55%), Gaps = 72/359 (20%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S+++NKE+R A++ K+K +K +K ++ +AR A A P TIE+ RE
Sbjct: 99 SLMRNKEQRLALYKKMKKEKHKKKMQERRARRKAGVPA------NPGH----TIESLREK 148
Query: 99 DET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
D+T + D++EL + D+FSS ++ PK+LIT + F EL +
Sbjct: 149 DQTEVANLNDSDNEELQKELELDDFSSYFERSYEPKVLITFADNPVTKTRKFGLELSRIF 208
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
PN+ R +K I + A++++FT +++V+ +RR+P+ LL+I LP+GPTAHFKLS +
Sbjct: 209 PNALVKIRNKSSVKNICKSAEREEFTDVVIVNEDRRKPNGLLVIHLPNGPTAHFKLSNVK 268
Query: 215 LRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
L DIK +H T H PE++LNNF TRLG VGR++ +LF PEFRGRR VTFHNQRD+
Sbjct: 269 LTSDIKRDHKEITKHRPEVILNNFTTRLGLTVGRMLGALFHHDPEFRGRRAVTFHNQRDY 328
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFRHHR YE TKE GK+ K
Sbjct: 329 IFFRHHR----------------------------YEF-----TKE-------GKRVK-- 346
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 390
L+E GPRFTLKL SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 347 -------------LRELGPRFTLKLRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 392
>gi|156837572|ref|XP_001642808.1| hypothetical protein Kpol_365p6 [Vanderwaltozyma polyspora DSM
70294]
gi|156113379|gb|EDO14950.1| hypothetical protein Kpol_365p6 [Vanderwaltozyma polyspora DSM
70294]
Length = 294
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 186/354 (52%), Gaps = 71/354 (20%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
IKNK +R + A LK Q+ E+ + R E+ E+ E+ +TIE+ R DE
Sbjct: 8 IKNKMRRQQLFADLKDQQNKERHTMRRKRAQEERENPEMKEKRLKENVTKTIESMRVYDE 67
Query: 101 TVCRP---DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNS 157
T+ + D+D+L F+S KQ PKIL+TT + F + L+ V+PN
Sbjct: 68 TINQAIEGDEDDLMKY-----FNSDSKQ--PPKILVTTNVNAKKKAYEFANVLIEVLPNV 120
Query: 158 HYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLR 216
+ KR Y LK+I+E K++FT +++++ ++++ L + LP+GP+ +FK+S V
Sbjct: 121 TFVKRKFGYKLKEIVEMCNKRNFTDLVIINEDKKKVTGLTFVHLPEGPSFYFKISSYVEV 180
Query: 217 KDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFF 276
+ I HG T HIPEL+LNNF TRLG VGRL QS+FPQ+P+F GR+V+T HNQRD+IFF
Sbjct: 181 QKIVGHGRATSHIPELILNNFQTRLGKTVGRLFQSIFPQNPDFEGRQVITLHNQRDYIFF 240
Query: 277 RHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSE 336
R H RY+F+ +E G
Sbjct: 241 RRH--------------------------------RYVFKNEERVG-------------- 254
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FT+KL LQ+G + E EW HKPEMD +++F+L
Sbjct: 255 ----------LQELGPQFTMKLKRLQNGIKE----ETEWEHKPEMDKEKKQFYL 294
>gi|194861356|ref|XP_001969766.1| GG10274 [Drosophila erecta]
gi|190661633|gb|EDV58825.1| GG10274 [Drosophila erecta]
Length = 394
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 197/359 (54%), Gaps = 72/359 (20%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S+++NKE+R A++ K+K +K +K ++ +AR A A P TIE+ RE
Sbjct: 101 SLMRNKEQRLALYKKMKKEKHKKKMQERRARRKAGVPA------NPGH----TIESLREK 150
Query: 99 DET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
D+T + D++EL D+FSS ++ PK+LIT + F EL +
Sbjct: 151 DQTEVANLNDSDNEELQKELQLDDFSSYFERSYEPKVLITFADNPVTKTRKFGLELSRIF 210
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
PN+ R +KKI + A++++FT +++V+ +RR+P+ LL+I LP+GPTAHFKLS +
Sbjct: 211 PNALVKIRNKSSVKKICKSAEREEFTDVVIVNEDRRKPNGLLVIHLPNGPTAHFKLSNVK 270
Query: 215 LRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
L DIK +H T H PE++L NF TRLG VGR++ +LF PEFRGRR VTFHNQRD+
Sbjct: 271 LTSDIKRDHKEITKHRPEVILTNFTTRLGLTVGRMLGALFHHDPEFRGRRAVTFHNQRDY 330
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFRHHR YE TKE GK+ K
Sbjct: 331 IFFRHHR----------------------------YEF-----TKE-------GKRVK-- 348
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 390
L+E GPRFTLKL SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 349 -------------LRELGPRFTLKLRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 394
>gi|71027549|ref|XP_763418.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350371|gb|EAN31135.1| hypothetical protein, conserved [Theileria parva]
Length = 321
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/309 (39%), Positives = 163/309 (52%), Gaps = 57/309 (18%)
Query: 83 PPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNR 142
P R TP TIE+ R DET+ P+D E+ DEFS + PK+LIT+ R S +
Sbjct: 69 PVVRKTPHTIESLRRFDETIVDPEDVEVKFEEQIDEFSDHFSRKVTPKLLITSTRRPSEK 128
Query: 143 GPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNR-REPDALLIIGLP 201
++ ELL V+ NS+Y+ R Y LK+++++A + FTSI++V + P+ L I LP
Sbjct: 129 MRTYMKELLLVLSNSYYFAREEYKLKEVVKHATENGFTSILLVTEGADKLPNGLYICSLP 188
Query: 202 DGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRG 261
GPT FKL+ L L ++K G PE+VLN+F TRLG R+GR I SLFP PEF G
Sbjct: 189 RGPTTFFKLTSLKLASEMKGAGVLVATKPEIVLNSFNTRLGRRIGRQIASLFPLDPEFEG 248
Query: 262 RRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESK 321
RRV+TFHNQRD IFFRHH RY+F
Sbjct: 249 RRVITFHNQRDMIFFRHH--------------------------------RYVF------ 270
Query: 322 GSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEM 381
++EK K I GPRFTLK +Q G FD GG +E++ +P++
Sbjct: 271 ------------RNEKKCSLKEI------GPRFTLKTHFVQDGLFDLDGGLYEFIWRPDL 312
Query: 382 DTSRRRFFL 390
R+RFF+
Sbjct: 313 QVDRKRFFI 321
>gi|342185234|emb|CCC94717.1| ribosome biogenesis protein [Trypanosoma congolense IL3000]
Length = 331
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/363 (36%), Positives = 181/363 (49%), Gaps = 66/363 (18%)
Query: 35 EILPSMI------KNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMT 88
E+ PS++ + K+ + +L+ QKK KR + R+ EK L E P +
Sbjct: 28 EVDPSLVERYRNTRQPVKKGQLFEELREQKKDAKRFR---RETREKERKVLKENAPTKAI 84
Query: 89 PRTIENTREPDET-VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 147
P+T E R PD T V +D E+ DEF+S K+G PKILITT R F+
Sbjct: 85 PKTKERMRLPDVTFVEDKNDTEILCDEADDEFASYFKEGRKPKILITTGERPCFRTKQFV 144
Query: 148 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 207
E L + PN+ Y R Y LK+I ++ +DFT ++VV +EP L++ LP GPTA
Sbjct: 145 KEALWLFPNATYRPRKDYTLKEITQFCINRDFTDLLVVTDRIKEPYNLIVSHLPQGPTAM 204
Query: 208 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 267
F+LS + +K+ T H PEL+ NF TRLG R+ RL++ LFP + ++ GR V TF
Sbjct: 205 FRLSNFATHEQLKDPAPRTEHYPELIFKNFDTRLGRRINRLLECLFPATRDYAGRAVATF 264
Query: 268 HNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANG 327
HNQRD+IF R H RYIF+ G DA
Sbjct: 265 HNQRDYIFMRTH--------------------------------RYIFD-----GLDA-- 285
Query: 328 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 387
R+QE GPRFT++L+SLQ GTFDT+ GE+EW K D +
Sbjct: 286 -----------------VRIQEMGPRFTMRLLSLQSGTFDTQFGEYEWFRKKVHDADKLE 328
Query: 388 FFL 390
++L
Sbjct: 329 WYL 331
>gi|50312031|ref|XP_456047.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645183|emb|CAG98755.1| KLLA0F21670p [Kluyveromyces lactis]
Length = 292
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/351 (36%), Positives = 179/351 (50%), Gaps = 67/351 (19%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
IKNK+KR + A+LK Q E+ + R E+ EL E+ A P TI+N R DE
Sbjct: 8 IKNKQKRQKLFAELKDQHNKERHSMRRTRAKEERENPELKEKRLAENVPDTIDNLRVYDE 67
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
T+ + + E+ D+F PKIL+TT + F + L+ V PN +
Sbjct: 68 TMGQEVEGEM------DDFMKFFNGTEPPKILLTTNVNAKKKAYEFANILIEVFPNVTFV 121
Query: 161 KRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
KR Y LK+I E+ +++T I++++ ++++ L I LP+GPT +FK+S V + I
Sbjct: 122 KRKFGYKLKEISEFCNNRNYTDIVIINEDKKKVTGLTFIHLPEGPTFYFKISSFVEVEKI 181
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
HG PT HIPEL+LNNF TRLG VG+L QS+FP++P+F GR+V+T HNQRD+IFFR H
Sbjct: 182 VGHGRPTSHIPELILNNFNTRLGKTVGKLFQSIFPKNPDFEGRQVITLHNQRDYIFFRRH 241
Query: 280 RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS 339
RY+F +E G
Sbjct: 242 --------------------------------RYVFRNEEKVG----------------- 252
Query: 340 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FT+KL LQ G + E EW HKP MD +++F L
Sbjct: 253 -------LQELGPQFTMKLKRLQRGIKE----ETEWEHKPSMDKEKKKFNL 292
>gi|195114572|ref|XP_002001841.1| GI14801 [Drosophila mojavensis]
gi|193912416|gb|EDW11283.1| GI14801 [Drosophila mojavensis]
Length = 407
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 196/359 (54%), Gaps = 72/359 (20%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S++KNKE+R A+ K+K +K +K ++ +AR A PA TIE+ RE
Sbjct: 114 SLMKNKEQRMALFRKMKKEKHKKKMQERRARRKAG---------VPAN-PGHTIESLREK 163
Query: 99 DET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
D+T + D +EL + D+FS+ ++ PK+LIT + F EL +
Sbjct: 164 DQTEVSNLNDSDHEELRKELELDDFSTYFERIYEPKVLITFADNPVTKTRKFGLELSRIF 223
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
PN+ R +KKI + A+++ FT +++V+ +RR+P+ LL+I LP+GPTAHFKLS +
Sbjct: 224 PNALVKIRNKASVKKICKSAEREQFTDVVIVNEDRRKPNGLLVIHLPNGPTAHFKLSNVK 283
Query: 215 LRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
L DIK NH T H PE++LNNF TRLG VGR++ +LF PEFRGRR VTFHNQRD+
Sbjct: 284 LTSDIKRNHKEITKHRPEVILNNFTTRLGLTVGRMLGALFHHDPEFRGRRAVTFHNQRDY 343
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFRHHR YE +KE GK+ K
Sbjct: 344 IFFRHHR----------------------------YEF-----SKE-------GKRVK-- 361
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 390
L+E GPRFTLKL SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 362 -------------LRELGPRFTLKLRSLQEGTFDSKTGDYTWIISNKRHAMESRRRFFL 407
>gi|325303276|tpg|DAA34774.1| TPA_inf: ribosome production factor 1 [Amblyomma variegatum]
Length = 234
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 160/290 (55%), Gaps = 57/290 (19%)
Query: 102 VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYK 161
+ + DD+E+ DE ++ ++ PK+LITT R F EL IPN+ +
Sbjct: 1 MVQADDEEVQLDEAMDEMAAYFRKEYIPKLLITTSDNPHTRTIRFCRELKQSIPNADFRW 60
Query: 162 RGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN 221
R +KK +E A ++ ++ I V++ +RR P+ LL+ LPDGPTA+F++S + KDIK
Sbjct: 61 RNRSRIKKTVEQAIERGYSDIAVINEDRRHPNGLLLTHLPDGPTAYFRISSVRFCKDIKG 120
Query: 222 HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRC 281
+ H PE++LNNF TRLGH V R++ SLF P+F+GRRVVTFHNQRD+IFFRHHR
Sbjct: 121 RAAYSVHRPEVILNNFNTRLGHSVARMLASLFHYDPQFQGRRVVTFHNQRDYIFFRHHR- 179
Query: 282 VPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQ 341
YE R +E+ S
Sbjct: 180 ---------------------------YEFR---------------------NAERVS-- 189
Query: 342 KVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
+QE GPRFTL+L SLQ GTFD+K GE+EWV K EM+TSRRRFFL
Sbjct: 190 -----IQEIGPRFTLRLKSLQKGTFDSKFGEYEWVLKRHEMETSRRRFFL 234
>gi|312385197|gb|EFR29753.1| hypothetical protein AND_01050 [Anopheles darlingi]
Length = 373
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/307 (41%), Positives = 163/307 (53%), Gaps = 62/307 (20%)
Query: 91 TIENTREPDETVC----RPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 146
TIE RE DET D +E+ + DEF ++ APK+LIT R F
Sbjct: 122 TIETLREKDETTVANLEEQDQEEVMKDLENDEFCEYYQKSYAPKVLITYNATPHTRTRQF 181
Query: 147 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 206
S L +IPNS +KR LKK+ + A ++++T I+VV+ ++P+ LL+I LP+GPTA
Sbjct: 182 ASLLRRMIPNSGTFKRQNTRLKKVCQSAIREEYTDIVVVNECNKKPEGLLVIHLPEGPTA 241
Query: 207 HFKLSKLVLRKDIKNH-GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 265
HFK+S KD+K N T H PE++LNNF TRLG +GR++ SLF PEFRGRR V
Sbjct: 242 HFKISNFKSMKDLKRRVKNITSHRPEVILNNFTTRLGLTIGRMLGSLFHYEPEFRGRRAV 301
Query: 266 TFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDA 325
TFHNQRD+IFFRHH YE D
Sbjct: 302 TFHNQRDYIFFRHH----------------------------LYEF------------DK 321
Query: 326 NGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV--HKPEMDT 383
NGK+ K L+E GPRFTLKL SLQ G FD K G++EW+ +K
Sbjct: 322 NGKRVK---------------LRELGPRFTLKLRSLQVGLFDNKCGDYEWMITNKRHQME 366
Query: 384 SRRRFFL 390
SRRRFFL
Sbjct: 367 SRRRFFL 373
>gi|170046389|ref|XP_001850750.1| ribosome production factor 1 [Culex quinquefasciatus]
gi|167869171|gb|EDS32554.1| ribosome production factor 1 [Culex quinquefasciatus]
Length = 365
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/381 (38%), Positives = 198/381 (51%), Gaps = 74/381 (19%)
Query: 17 GEKENDKNNENISKKMKKEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRA 76
G K++D+ E +S + I + IKNKE RS K K+ + KK + + A + R
Sbjct: 52 GLKDDDEGAEEVSYPVINPI--NFIKNKEIRS------KKFKRQQGSKKKEEKKARKARK 103
Query: 77 LELGEEPPARMTPRTIENTREPDETV----CRPDDDELFAGNDADEFSSILKQGCAPKIL 132
LE G P TIE+ RE DET D +E+ + DEF+ + PK+L
Sbjct: 104 LEGGPRPNGH----TIESLREKDETALANAAEEDTEEIANDLENDEFNEYYAKSYEPKVL 159
Query: 133 ITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREP 192
IT R F SEL ++PNS + R LKK+ + A +++FT ++V++ N ++P
Sbjct: 160 ITYNATPHTRTRRFGSELERILPNSMVHSRNKATLKKVCQSAIREEFTDLVVINENNKQP 219
Query: 193 DALLIIGLPDGPTAHFKLSKLVLRKDIKN-HGNPTGHIPELVLNNFATRLGHRVGRLIQS 251
+ +L+I LPDGPTAHFK+S D+K G T H PE++L NF TRLG +GR++ +
Sbjct: 220 EGMLVIHLPDGPTAHFKISNYKSLHDMKKRRGMITSHRPEVILTNFTTRLGLTIGRMLGA 279
Query: 252 LFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYEC 311
LF PEF+GRRV TFHNQRD+IFFRHH YE
Sbjct: 280 LFHYDPEFKGRRVATFHNQRDYIFFRHH----------------------------LYEF 311
Query: 312 RYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGG 371
D NGK+ K L+E GPRFTLKL SLQ G FD+K G
Sbjct: 312 ------------DKNGKRVK---------------LRELGPRFTLKLRSLQTGLFDSKCG 344
Query: 372 EFEWV--HKPEMDTSRRRFFL 390
++EW+ +K + SRRRFFL
Sbjct: 345 DYEWMITNKRHLMESRRRFFL 365
>gi|195035413|ref|XP_001989172.1| GH10194 [Drosophila grimshawi]
gi|193905172|gb|EDW04039.1| GH10194 [Drosophila grimshawi]
Length = 400
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/359 (38%), Positives = 195/359 (54%), Gaps = 72/359 (20%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S++KNKE+R+A+ K+K +K +K ++ +AR R L P TIE+ RE
Sbjct: 107 SLMKNKEQRTALFRKMKKEKHKKKMQERRAR-----RKAGLPANP-----GHTIESLREK 156
Query: 99 DET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
D+T + D++EL + D+FS+ ++ PK+LIT + F EL +
Sbjct: 157 DQTEVSNLNDSDNEELRKELEIDDFSTYFERIYEPKVLITFADNPVTKTRKFGLELSRIF 216
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
PN+ R +KKI + A+++ FT +++++ +RR+P+ALL+I LP+GPTAHFKLS +
Sbjct: 217 PNALVKIRNKASVKKICKSAEREQFTDVVIINEDRRQPNALLVIHLPNGPTAHFKLSNVK 276
Query: 215 LRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
L DIK +H T H PE++L NF TRLG VGR++ +LF PEFRGRR TFHNQRD+
Sbjct: 277 LTTDIKRDHKEITKHRPEVILTNFTTRLGLTVGRMLGALFHHDPEFRGRRAATFHNQRDY 336
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFRHHR YE + GK+ K
Sbjct: 337 IFFRHHR----------------------------YEF------------NKEGKRVK-- 354
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 390
L+E GPRFTLKL SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 355 -------------LRELGPRFTLKLRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 400
>gi|323308831|gb|EGA62068.1| Rpf1p [Saccharomyces cerevisiae FostersO]
Length = 295
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 182/356 (51%), Gaps = 75/356 (21%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I NK KR + A +KH+K E+ + R E+ EL E+ +TIENTR DE
Sbjct: 9 ITNKLKRQEIFADIKHEKNKERHTMRRKRAKEERENPELREQRLKENVTQTIENTRVYDE 68
Query: 101 TVCRP---DDDEL--FAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIP 155
T+ + D+D+L + ++++E PKI +TT F + L+ ++P
Sbjct: 69 TINKEVEGDEDDLMRYFNSNSNE---------PPKIFLTTNVNAKKSAYEFANILIEILP 119
Query: 156 NSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
N + KR Y LK+I + K++FT I++++ ++++ L I LP+GPT +FKLS V
Sbjct: 120 NVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFV 179
Query: 215 LRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFI 274
K I HG PT HIPEL+LNNF TRLG VGRL QS+ PQ+P+ GR+V+T HNQRD+I
Sbjct: 180 EVKKIVGHGGPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYI 239
Query: 275 FFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAK 334
FFR H RY+F+ E G
Sbjct: 240 FFRRH--------------------------------RYVFKDNERVG------------ 255
Query: 335 SEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL LQ G + E EW HKPEMD +++F+L
Sbjct: 256 ------------LQELGPQFTLKLKRLQRGIKE----ETEWEHKPEMDKEKKKFYL 295
>gi|344305240|gb|EGW35472.1| hypothetical protein SPAPADRAFT_131696 [Spathaspora passalidarum
NRRL Y-27907]
Length = 298
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/353 (36%), Positives = 182/353 (51%), Gaps = 69/353 (19%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRA-LELGEEPPARMTPRTIENTREPD 99
IKNK++R V ++KH+K + R KL+A A E+RA L EE A+ P T++N R D
Sbjct: 12 IKNKQRRQKVFGEIKHEKN-KARHKLRAERAKEERANPALREERIAQNIPDTLDNKRVFD 70
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQ-GCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
ET+ G D DEF G PKIL+TT F L+ +PN+
Sbjct: 71 ETIGVE-----VEGEDQDEFQQYFTNLGSEPKILLTTSENAKKPAYEFADMLMDFLPNTT 125
Query: 159 YYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRK 217
+ KR Y +K+I ++A +++T ++V++ ++++ + I LP+GPT +F ++ +V K
Sbjct: 126 FIKRKKEYSMKEIAKFASNREYTDLLVINEDKKKVTGITFIHLPEGPTFYFSITSIVDGK 185
Query: 218 DIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK HG T HIPELVLNNF +RLG VGRL QS+FP PE +GR+V+T HNQRD+IF R
Sbjct: 186 RIKGHGRATDHIPELVLNNFNSRLGKTVGRLFQSIFPHQPEIQGRQVITLHNQRDYIFVR 245
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF +E G
Sbjct: 246 RH--------------------------------RYIFRNEEKVG--------------- 258
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL LQ G G+ W H+P+M+ +++F+L
Sbjct: 259 ---------LQELGPQFTLKLRRLQKGV----RGDVIWEHRPDMERDKKKFYL 298
>gi|401838442|gb|EJT42078.1| RPF1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 295
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/357 (36%), Positives = 179/357 (50%), Gaps = 77/357 (21%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I NK KR + A +KH K E+ + R E+ EL E+ +TIENTR DE
Sbjct: 9 ITNKLKRQEIFADIKHDKNKERHTMRRKRAKEERDNPELREQRLKENVTQTIENTRVYDE 68
Query: 101 TVCRP---DDDEL---FAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
T+ + D+D+L F GN + PKI +TT F + ++ V+
Sbjct: 69 TINKEVEGDEDDLMKYFNGNSNE----------PPKIFLTTNVNAKKSAYEFANIMIEVL 118
Query: 155 PNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKL 213
PN + KR Y LK+I + K++FT I++++ ++++ L I LP+GPT +FKLS
Sbjct: 119 PNVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSF 178
Query: 214 VLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
V K I HG PT HIPEL+LNNF TRLG VGRL QS+ PQ+P+ GR+V+T HNQRD+
Sbjct: 179 VEVKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDY 238
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFR H RY+F+ E G
Sbjct: 239 IFFRRH--------------------------------RYVFKDNERVG----------- 255
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL LQ G + E EW HKPEMD +++F+L
Sbjct: 256 -------------LQELGPQFTLKLKRLQRGIKE----ETEWEHKPEMDKEKKKFYL 295
>gi|6321880|ref|NP_011956.1| Rpf1p [Saccharomyces cerevisiae S288c]
gi|731684|sp|P38805.1|RPF1_YEAST RecName: Full=Ribosome production factor 1; AltName: Full=Ribosome
biogenesis protein RPF1
gi|487932|gb|AAB68926.1| Yhr088wp [Saccharomyces cerevisiae]
gi|151944036|gb|EDN62329.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190405870|gb|EDV09137.1| ribosome production factor 1 [Saccharomyces cerevisiae RM11-1a]
gi|207344657|gb|EDZ71727.1| YHR088Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269443|gb|EEU04738.1| Rpf1p [Saccharomyces cerevisiae JAY291]
gi|259146843|emb|CAY80099.1| Rpf1p [Saccharomyces cerevisiae EC1118]
gi|285809997|tpg|DAA06784.1| TPA: Rpf1p [Saccharomyces cerevisiae S288c]
gi|323304586|gb|EGA58349.1| Rpf1p [Saccharomyces cerevisiae FostersB]
gi|323337304|gb|EGA78557.1| Rpf1p [Saccharomyces cerevisiae Vin13]
gi|323354649|gb|EGA86484.1| Rpf1p [Saccharomyces cerevisiae VL3]
gi|349578641|dbj|GAA23806.1| K7_Rpf1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765200|gb|EHN06712.1| Rpf1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392298895|gb|EIW09990.1| Rpf1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 295
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 182/356 (51%), Gaps = 75/356 (21%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I NK KR + A +KH+K E+ + R E+ EL E+ +TIENTR DE
Sbjct: 9 ITNKLKRQEIFADIKHEKNKERHTMRRKRAKEERENPELREQRLKENVTQTIENTRVYDE 68
Query: 101 TVCRP---DDDEL--FAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIP 155
T+ + D+D+L + ++++E PKI +TT F + L+ ++P
Sbjct: 69 TINKEVEGDEDDLMRYFNSNSNE---------PPKIFLTTNVNAKKSAYEFANILIEILP 119
Query: 156 NSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
N + KR Y LK+I + K++FT I++++ ++++ L I LP+GPT +FKLS V
Sbjct: 120 NVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFV 179
Query: 215 LRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFI 274
K I HG PT HIPEL+LNNF TRLG VGRL QS+ PQ+P+ GR+V+T HNQRD+I
Sbjct: 180 EVKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYI 239
Query: 275 FFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAK 334
FFR H RY+F+ E G
Sbjct: 240 FFRRH--------------------------------RYVFKDNERVG------------ 255
Query: 335 SEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL LQ G + E EW HKPEMD +++F+L
Sbjct: 256 ------------LQELGPQFTLKLKRLQRGIKE----ETEWEHKPEMDKEKKKFYL 295
>gi|403214375|emb|CCK68876.1| hypothetical protein KNAG_0B04420 [Kazachstania naganishii CBS
8797]
Length = 295
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 180/357 (50%), Gaps = 76/357 (21%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
IKNK KR V A+++ QK E+ K R E+ EL + A P+TI++ RE DE
Sbjct: 8 IKNKMKRQDVFARIRDQKNKERHKLRSTRAKEERSNPELKAKRLAENVPQTIDSKREYDE 67
Query: 101 TV---CRPDDDEL---FAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
T+ D+D+L F N+ D PKI +TT F + L+ V+
Sbjct: 68 TIGAEVEDDEDDLMRHFNSNNKD---------MPPKIFLTTNVNARKCAYEFANVLIEVL 118
Query: 155 PNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKL 213
PN + KR Y LK+I E K++FT ++V++ ++++ L + LPDGPT +FKLS
Sbjct: 119 PNVTFVKRKFGYKLKEIAEMCIKRNFTDMVVINEDKKKVTGLTFMHLPDGPTFYFKLSSY 178
Query: 214 VLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
V + HG T HIPEL+LNNF TRLG VGRL QS+FPQ P+F GR+V+T HNQRD+
Sbjct: 179 VEVLKVHGHGRATSHIPELILNNFQTRLGKTVGRLFQSIFPQDPDFEGRQVITLHNQRDY 238
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFR H RYIF+ +E G
Sbjct: 239 IFFRRH--------------------------------RYIFKDEEKVG----------- 255
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL +Q G + E EW HKPEMD +++F L
Sbjct: 256 -------------LQELGPQFTLKLKRIQRGLRE----ETEWEHKPEMDKDKKKFHL 295
>gi|146415746|ref|XP_001483843.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
gi|146392316|gb|EDK40474.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 292
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 181/351 (51%), Gaps = 68/351 (19%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
IKNK++R V + LKH+ E+ K R E+ +L EE A P T+E+ R DE
Sbjct: 9 IKNKQRRQRVVSDLKHKHNKERHSLRKERAKEERANPQLREERIANNIPETLESKRVYDE 68
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
TV + +DEF + PK++ITT + F ++ +PNS +
Sbjct: 69 TVGAEIEG-------SDEFQKYFENPRDPKVMITTNANAKKQAYEFADIMMDFLPNSTFV 121
Query: 161 KRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
KR Y++K++ ++ +++T ++V++ ++++ + L I+ LP+GP+ +F ++ LV K I
Sbjct: 122 KRKKAYNMKEMAKFCSNREYTDLVVINEDKKKVNGLTIMHLPEGPSFYFSVTSLVDTKRI 181
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+ HG T HIPELVLNNF TRLG VGRL QS+FP PE +GR+VVT HNQRD+IFFR H
Sbjct: 182 EGHGRATDHIPELVLNNFNTRLGKTVGRLFQSMFPHRPEIQGRQVVTLHNQRDYIFFRRH 241
Query: 280 RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS 339
RY+F +E G
Sbjct: 242 --------------------------------RYVFRNEEKVG----------------- 252
Query: 340 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL LQ G D E EW H+P+M+ +R+F+L
Sbjct: 253 -------LQELGPQFTLKLRRLQRGIKD----EVEWEHRPDMERDKRKFYL 292
>gi|195387884|ref|XP_002052622.1| GJ20668 [Drosophila virilis]
gi|194149079|gb|EDW64777.1| GJ20668 [Drosophila virilis]
Length = 395
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/360 (40%), Positives = 197/360 (54%), Gaps = 74/360 (20%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTP-RTIENTRE 97
S++KNKE+R A++ K+K +K +K K+ +AR A A P TIE+ RE
Sbjct: 102 SLMKNKEQRMALYRKMKKEKHKKKMKERRARRKAGVPA-----------NPGHTIESLRE 150
Query: 98 PDET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSV 153
D+T + D++EL + D+FS+ ++ PK+LIT + F EL +
Sbjct: 151 KDQTEVSNLNDSDNEELRKELEIDDFSTYFERIYEPKVLITFADNPVTKTRKFGLELSRI 210
Query: 154 IPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKL 213
PN+ R +KKI + A+++ FT +++V+ +RR+P+ LL+I LP+GPTAHFKLS +
Sbjct: 211 FPNALVKIRNKASVKKICKSAEREQFTDVVIVNEDRRKPNGLLVIHLPNGPTAHFKLSNV 270
Query: 214 VLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRD 272
L DIK NH T H PE++L NF TRLG VGR++ +LF PEFRGRR VTFHNQRD
Sbjct: 271 KLTSDIKRNHKEITKHRPEVILTNFTTRLGLTVGRMLGALFHHDPEFRGRRAVTFHNQRD 330
Query: 273 FIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKD 332
+IFFRHHR YE +KE GK+ K
Sbjct: 331 YIFFRHHR----------------------------YEF-----SKE-------GKRVK- 349
Query: 333 AKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 390
L+E GPRFTLKL SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 350 --------------LRELGPRFTLKLRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 395
>gi|407404357|gb|EKF29844.1| ribosome biogenesis protein, putative [Trypanosoma cruzi
marinkellei]
Length = 330
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 188/363 (51%), Gaps = 66/363 (18%)
Query: 35 EILPSMI------KNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMT 88
E+ P+++ + K+S + +L+ Q K KR + +AR+ K +L E PA+
Sbjct: 27 EVDPALVELYRSTRQPVKKSQLFEQLREQNKDAKRVRREARERERK---QLKENAPAKAI 83
Query: 89 PRTIENTREPDETVCRPDDDELFAGNDAD-EFSSILKQGCAPKILITTCRFNSNRGPAFI 147
P+T E R PD T+ +D ++AD EF++ K+G P ILITT R F+
Sbjct: 84 PKTKERLRRPDVTIVEDKEDAEIVRDEADDEFAAYYKEGRKPSILITTGEHPCFRTKQFV 143
Query: 148 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 207
ELL + PNS Y R Y LK+I ++ ++FT ++V+ +EP L+I LP+GPTA
Sbjct: 144 KELLWLFPNSTYRPRKDYTLKEITQFCINREFTDLVVITDRLKEPYNLIISHLPEGPTAM 203
Query: 208 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 267
F+LS + +K+ T H PEL+ NF TRLG R+ R+++ LFP + ++ GR V TF
Sbjct: 204 FRLSNFMTHAQLKDPAPRTEHYPELIFKNFDTRLGRRIHRMLECLFPATRDYAGRAVATF 263
Query: 268 HNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANG 327
HNQRD+IF R H RYIF++ E+
Sbjct: 264 HNQRDYIFMRTH--------------------------------RYIFDSLEA------- 284
Query: 328 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 387
R+QE GPRFT++L+SLQ GTFDT+ GE+EW K E D+ +
Sbjct: 285 -----------------VRIQEMGPRFTMRLLSLQLGTFDTQFGEYEWFRKKEHDSDKLE 327
Query: 388 FFL 390
+++
Sbjct: 328 WYI 330
>gi|367004120|ref|XP_003686793.1| hypothetical protein TPHA_0H01530 [Tetrapisispora phaffii CBS 4417]
gi|357525095|emb|CCE64359.1| hypothetical protein TPHA_0H01530 [Tetrapisispora phaffii CBS 4417]
Length = 294
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 130/354 (36%), Positives = 179/354 (50%), Gaps = 71/354 (20%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I NK KR + A++K QK E+ + R E+ EL E+ TIE+ R DE
Sbjct: 8 IGNKLKRQELFAEVKDQKNKERHTMRRQRAKEERDNPELKEKRLKENVTNTIESMRVYDE 67
Query: 101 TVCRP---DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNS 157
T+ + D+DEL ++D PKIL+TT + F + L+ V+PN
Sbjct: 68 TITKDIEGDEDELMKFFNSD-------NNNPPKILVTTNVNAKKKAYEFANVLIEVLPNV 120
Query: 158 HYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLR 216
+ KR LK + + +K+DFT I++++ ++++ L + LP+GPT +FKLS V
Sbjct: 121 TFVKRKFGIKLKDMADMCEKRDFTDIVIINEDKKKVTGLTFMHLPEGPTFYFKLSSYVEV 180
Query: 217 KDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFF 276
I HG PT HIPEL+LNNF TRLG VGRL QS+FP++PEF GR+V+T HNQRD+IFF
Sbjct: 181 TKITGHGRPTSHIPELILNNFQTRLGKTVGRLFQSIFPKNPEFEGRQVITLHNQRDYIFF 240
Query: 277 RHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSE 336
R H RY+F +E G
Sbjct: 241 RRH--------------------------------RYVFRNEEKVG-------------- 254
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL LQ G + E EW HKPEMD +++F+L
Sbjct: 255 ----------LQELGPQFTLKLKRLQRGIKE----ETEWEHKPEMDKQKKQFYL 294
>gi|289742039|gb|ADD19767.1| ribosome bioproteinsis protein RPF1 [Glossina morsitans morsitans]
Length = 385
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/360 (38%), Positives = 196/360 (54%), Gaps = 73/360 (20%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
++I+NKEKR A+ K+K +K +K ++ +AR A PA TIE+ RE
Sbjct: 91 NLIRNKEKRMALFRKMKKEKHKKKMQERRARRKAG---------IPAN-PGHTIESLREA 140
Query: 99 DETVCR----PDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
D+T+ +++EL + DEFS+ ++ PK+LIT + F EL +
Sbjct: 141 DQTIVTNLNASENEELRQELECDEFSAYFERIYEPKVLITFADNPVTKTRKFGLELGRIF 200
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
PN+ R +KK+ + A ++++T I++++ +RR+P+ LL+I LP+GPTAHFKLS +
Sbjct: 201 PNALVKIRNRSSVKKMCQSAIREEYTDIVIINEDRRKPNGLLVIHLPNGPTAHFKLSNVK 260
Query: 215 LRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
L DIK +H T H PE++LNNF TRLG +GR++ +LF PEF+GRRV TFHNQRD+
Sbjct: 261 LTTDIKRDHKEITKHRPEVILNNFTTRLGLTIGRMLGALFHHDPEFKGRRVATFHNQRDY 320
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFRHH RY F +GK+AK
Sbjct: 321 IFFRHH--------------------------------RYEF--------SKDGKRAK-- 338
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 390
L+E GPRFTLKL SLQ GTFD+K G++ W+ + M+ SRRRF L
Sbjct: 339 -------------LRELGPRFTLKLRSLQEGTFDSKTGDYVWIITNKRHSMEASRRRFHL 385
>gi|444322686|ref|XP_004181984.1| hypothetical protein TBLA_0H01780 [Tetrapisispora blattae CBS 6284]
gi|387515030|emb|CCH62465.1| hypothetical protein TBLA_0H01780 [Tetrapisispora blattae CBS 6284]
Length = 293
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 183/355 (51%), Gaps = 74/355 (20%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I NK KR + A++KHQK E+ R E+ EL E+ P TI++ R DE
Sbjct: 8 ISNKLKRQELFAEIKHQKNKERHVMRSQRAKEERENPELKEKRLKENVPNTIDSMRTYDE 67
Query: 101 TVCRP---DDDELFAG-NDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPN 156
T+ + D+D+L ND+ E PKIL+TT F + L+ ++PN
Sbjct: 68 TINQEIEGDEDDLMKYFNDSKE---------PPKILLTTNVNARKIAYEFANVLIEILPN 118
Query: 157 SHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVL 215
+ KR + +K+I + A K+ FT I++++ ++++ L + LP+GP+ +FK+S V
Sbjct: 119 VTFVKRKFGFTMKEISDIANKRHFTDIVIINEDKKKVTGLTFMHLPEGPSFYFKVSSYVE 178
Query: 216 RKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 275
K I HG PT H+PEL+LNNF TRLG VGRL QS+FPQ+P+F GR+V+T HNQRD+IF
Sbjct: 179 VKKIVGHGRPTSHVPELILNNFQTRLGKTVGRLFQSIFPQNPDFEGRQVITLHNQRDYIF 238
Query: 276 FRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKS 335
FR H RY+F+ +E G
Sbjct: 239 FRRH--------------------------------RYLFKNEEKVG------------- 253
Query: 336 EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL LQ G + E EW HKPEMD +++F+L
Sbjct: 254 -----------LQELGPQFTLKLRRLQRGIKE----ETEWEHKPEMDKEKKKFYL 293
>gi|66504690|ref|XP_394351.2| PREDICTED: probable ribosome production factor 1-like [Apis
mellifera]
Length = 336
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 176/319 (55%), Gaps = 64/319 (20%)
Query: 81 EEPPARMTPRTIENTREPDETVCR-----PDDDELFAGNDADEFSSILKQGCAPKILITT 135
+E + P TIE+ RE DET+ ++ EL + DEF++ K PK+LIT
Sbjct: 73 QEGGPKQIPHTIESLREKDETIVTGSLEDEENAELKVDFEHDEFAAYYKHTYDPKVLITY 132
Query: 136 CRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDAL 195
C + + F EL +IPNS R +KK+++ A ++FT II+++ ++ +P+ +
Sbjct: 133 CDNPTRKTRIFGVELTRIIPNSISLYRNRSGVKKMVKSAIARNFTDIIIINEDQCKPNGM 192
Query: 196 LIIGLPDGPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP 254
LII LPDGPTAHFKLS + + ++K +H + H PE++L NF TRLG +GR++ +LF
Sbjct: 193 LIIHLPDGPTAHFKLSNVKITPELKRSHKEISKHRPEVILTNFTTRLGCTIGRMLGALFH 252
Query: 255 QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYI 314
PEF+G RVVTFHNQRD+IFFRHH +Y
Sbjct: 253 YQPEFKGSRVVTFHNQRDYIFFRHH--------------------------------KYQ 280
Query: 315 FETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE 374
F+ + +K RL+E GPRFTL+L SLQ GTF++K GE+E
Sbjct: 281 FDLETAK-----------------------PRLRELGPRFTLRLKSLQQGTFNSKHGEYE 317
Query: 375 WV---HKPEMDTSRRRFFL 390
W+ + +M+TSRR+FFL
Sbjct: 318 WLIQGKRHDMETSRRKFFL 336
>gi|194765991|ref|XP_001965108.1| GF23434 [Drosophila ananassae]
gi|190617718|gb|EDV33242.1| GF23434 [Drosophila ananassae]
Length = 389
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 196/359 (54%), Gaps = 72/359 (20%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S+++NKE+R A++ K+K +K +K ++ +AR A PA TIE+ RE
Sbjct: 96 SLMRNKEQRMALYKKMKKEKHKKKMQERRARRKAG---------VPAN-PGHTIESLREK 145
Query: 99 DET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
D+T + D++EL + D+FSS ++ PK+LIT + F EL +
Sbjct: 146 DQTEVSNLNDSDNEELQKELELDDFSSYFERSYEPKVLITFADNPVTKTRKFGLELSRIF 205
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
PN+ R +KKI + A+++ FT +++++ +RR+P+ LL+I LP GPTAHFK+S +
Sbjct: 206 PNALVKIRNKSSVKKICKSAEREQFTDVVIINEDRRKPNGLLVIHLPSGPTAHFKVSNVK 265
Query: 215 LRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
L DIK +H T H PE++L NF TRLG VGR++ +LF PEFRGRR VTFHNQRD+
Sbjct: 266 LTSDIKRDHKEITKHRPEVILTNFTTRLGLTVGRMLGALFHHDPEFRGRRAVTFHNQRDY 325
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFRHHR YE +KE GK+ K
Sbjct: 326 IFFRHHR----------------------------YEF-----SKE-------GKRVK-- 343
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 390
L+E GPRFTLKL SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 344 -------------LRELGPRFTLKLRSLQEGTFDSKTGDYAWIISNKRHSMESRRRFFL 389
>gi|407843766|gb|EKG01621.1| hypothetical protein TCSYLVIO_007381 [Trypanosoma cruzi]
Length = 330
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 187/363 (51%), Gaps = 66/363 (18%)
Query: 35 EILPSMI------KNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMT 88
E+ P+++ + K+S + +L+ QKK KR + +AR+ K +L E PA+
Sbjct: 27 EVDPALVELYRSTRQPVKKSQLFEQLREQKKDAKRVRREARERERK---QLKENAPAKAI 83
Query: 89 PRTIENTREPDETVCRPDDDELFAGNDAD-EFSSILKQGCAPKILITTCRFNSNRGPAFI 147
P+T E R PD T+ DD ++AD EF++ K+ P ILITT R F+
Sbjct: 84 PKTKERLRRPDVTIVEEKDDAEIVRDEADDEFAAYYKEARKPSILITTGEHPCFRTKQFV 143
Query: 148 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 207
E L + PNS Y R Y LK+I ++ ++FT ++V+ +EP L+I LP+GPTA
Sbjct: 144 KEALWLFPNSTYRPRKDYTLKEITQFCINREFTDLVVITDRLKEPYNLIISHLPEGPTAT 203
Query: 208 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 267
F+LS + +K+ T H PEL+ NF TRLG R+ R+++ LFP + ++ GR V TF
Sbjct: 204 FRLSNFMAHAQLKDPAPRTEHYPELIFKNFDTRLGRRIHRMLECLFPATRDYAGRAVATF 263
Query: 268 HNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANG 327
HNQRD+IF R H RYIF++ E+
Sbjct: 264 HNQRDYIFMRTH--------------------------------RYIFDSLEA------- 284
Query: 328 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 387
R+QE GPRFT++L+SLQ GTFDT+ GE+EW K E D+ +
Sbjct: 285 -----------------VRIQEMGPRFTMRLLSLQLGTFDTQFGEYEWFRKKEHDSDKLE 327
Query: 388 FFL 390
+++
Sbjct: 328 WYI 330
>gi|254577365|ref|XP_002494669.1| ZYRO0A06930p [Zygosaccharomyces rouxii]
gi|238937558|emb|CAR25736.1| ZYRO0A06930p [Zygosaccharomyces rouxii]
Length = 293
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 129/357 (36%), Positives = 184/357 (51%), Gaps = 78/357 (21%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPAR------MTPRTIEN 94
IKNK R + A LK QK E R K++A+ A E+R E+P A+ P+TIE
Sbjct: 8 IKNKMLRQQIIADLKDQKNKE-RHKMRAQRAKEER-----EDPTAKEKRLAENVPKTIEG 61
Query: 95 TREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
R DET+ + D+ ++ D G PKIL+TT F + L+ +
Sbjct: 62 MRVYDETIGQKDE-----ADEEDLMQLFNNNGEPPKILLTTSINAKRNAYEFANVLIEIF 116
Query: 155 PNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKL 213
PN + KR +K I+E + K++FT II+++ ++++ L + LP+GP+ +FK+S
Sbjct: 117 PNVTFVKRKFGLTMKDIVEASSKRNFTDIIIINEDKKKVTGLTFMHLPEGPSFYFKVSSY 176
Query: 214 VLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
V K I HG PT HIPEL+LNNF+TRLG VG L QS+FP++P+F GR+V+T HNQRD+
Sbjct: 177 VDVKKIVGHGRPTSHIPELILNNFSTRLGKTVGTLFQSIFPKNPDFEGRQVITLHNQRDY 236
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
IFFR H RY+FE ++ G
Sbjct: 237 IFFRRH--------------------------------RYVFENEKKVG----------- 253
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL LQ G + E EW ++PEMD +++F+L
Sbjct: 254 -------------LQELGPQFTLKLRRLQRGIKE----ETEWEYRPEMDKEKKKFYL 293
>gi|410079372|ref|XP_003957267.1| hypothetical protein KAFR_0D04850 [Kazachstania africana CBS 2517]
gi|372463852|emb|CCF58132.1| hypothetical protein KAFR_0D04850 [Kazachstania africana CBS 2517]
Length = 295
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 129/354 (36%), Positives = 180/354 (50%), Gaps = 70/354 (19%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
+KNK KR A+ A++K QK E+ + R E+ EL E+ +TI++ R DE
Sbjct: 8 VKNKMKRQALFAEVKDQKNKERHTMRRTRAKEERENPELKEKRLKENVTQTIDSMRVYDE 67
Query: 101 TV---CRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNS 157
T+ D+D+L +F + PKI +TT F + L+ V+PN
Sbjct: 68 TIKEAIEGDEDDLM------KFFNNRNSNQPPKIFLTTNVNAKKAAYEFANVLIEVLPNV 121
Query: 158 HYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLR 216
+ KR Y LK+I + K+DFT +++++ ++++ L + LP+GP+ +FKLS V
Sbjct: 122 TFVKRKFGYKLKEIADMCIKRDFTDMVIINEDKKKVTGLTFMHLPEGPSFYFKLSSYVEV 181
Query: 217 KDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFF 276
K I HG PT HIPEL+LNNF TRLG VGRL QS+FPQ+PEF GR+V+T HNQRD+IFF
Sbjct: 182 KKIVGHGRPTSHIPELILNNFQTRLGKTVGRLFQSIFPQNPEFEGRQVITLHNQRDYIFF 241
Query: 277 RHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSE 336
R H RY+F +E G
Sbjct: 242 RRH--------------------------------RYVFRNEEKVG-------------- 255
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL LQ G + E EW H+PEMD +++F L
Sbjct: 256 ----------LQELGPQFTLKLKRLQRGLKE----ETEWEHRPEMDKEKKKFHL 295
>gi|255714697|ref|XP_002553630.1| KLTH0E03410p [Lachancea thermotolerans]
gi|238935012|emb|CAR23193.1| KLTH0E03410p [Lachancea thermotolerans CBS 6340]
Length = 293
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 184/352 (52%), Gaps = 68/352 (19%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I+NK KR + A++K QK E+ K K R E+ EL E+ TI++ R DE
Sbjct: 8 IRNKMKRQELFAEVKDQKNKERHKMRKQRAKEERENPELKEKRLKENVTNTIDSLRVYDE 67
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAP-KILITTCRFNSNRGPAFISELLSVIPNSHY 159
T+ + G++AD F+ G P KIL+TT + F + L+ ++PN +
Sbjct: 68 TIHQE-----VEGDEAD-FAQFFNNGTEPPKILLTTNVNAKKKAYEFANVLIEILPNVTF 121
Query: 160 YKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
KR Y LK+I+E+ +++T +++++ ++++ L I LP+GP+ +FK+S V +
Sbjct: 122 VKRKFGYKLKEIVEFCSNRNYTDLVIINEDKKKVTGLTFIHLPEGPSFYFKISSYVDVQK 181
Query: 219 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
I HG T HIPEL+LNNF TRLG+ VGRL QS+FP++P+F GR+V+T HNQRD+IFFR
Sbjct: 182 IVGHGRATSHIPELILNNFQTRLGNTVGRLFQSIFPKNPDFEGRQVITLHNQRDYIFFRR 241
Query: 279 HRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKT 338
H RY+F +E G
Sbjct: 242 H--------------------------------RYVFRNEEKVG---------------- 253
Query: 339 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FT+KL+ LQHG + E EW H +MD +++F+L
Sbjct: 254 --------LQELGPQFTMKLLRLQHGIKE----ETEWEHTADMDKEKKKFYL 293
>gi|71754567|ref|XP_828198.1| RNA processing factor 1 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833584|gb|EAN79086.1| RNA processing factor 1, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261334004|emb|CBH16998.1| RNA processing factor 1, putative [Trypanosoma brucei gambiense
DAL972]
Length = 331
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 161/313 (51%), Gaps = 57/313 (18%)
Query: 79 LGEEPPARMTPRTIENTREPDETVCRPDDD-ELFAGNDADEFSSILKQGCAPKILITTCR 137
L E PA+ P+T E R PD T +D E+ DEF+S K+G PKILITT
Sbjct: 75 LKENAPAKPIPKTKERMRLPDVTFVEDKNDAEILRDEADDEFASYFKEGRKPKILITTGE 134
Query: 138 FNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLI 197
R F+ E L + PNS Y R Y+LK+I ++ ++FT +IVV +EP L+I
Sbjct: 135 HPCFRTKLFVKEALWLFPNSIYRPRKKYNLKEITQFCINREFTDLIVVTDRLKEPYNLII 194
Query: 198 IGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSP 257
LP+GPTA F++S + +K+ T H PEL+ NF TRLG R+ RL++ LFP +
Sbjct: 195 SHLPEGPTAMFRVSNFMTHAQLKDPAPRTEHYPELIFKNFDTRLGRRINRLLECLFPATR 254
Query: 258 EFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFET 317
++ GR V TFHNQRD+IF R H RYIF++
Sbjct: 255 DYEGRAVATFHNQRDYIFMRTH--------------------------------RYIFDS 282
Query: 318 KESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH 377
++ R+QE GPRFTL+L+SLQ GTFDT+ GE+EW
Sbjct: 283 LDA------------------------VRIQEMGPRFTLRLLSLQSGTFDTQFGEYEWFR 318
Query: 378 KPEMDTSRRRFFL 390
K E D + ++L
Sbjct: 319 KKEHDDDKLEWYL 331
>gi|126135862|ref|XP_001384455.1| hypothetical protein PICST_59404 [Scheffersomyces stipitis CBS
6054]
gi|126091653|gb|ABN66426.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 295
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 180/352 (51%), Gaps = 70/352 (19%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRA-LELGEEPPARMTPRTIENTREPD 99
IKNK +R + ++KH+K ++R KL+A A E+R EL EE P TI++ R D
Sbjct: 12 IKNKHRRQKIFGEIKHEKN-KQRHKLRAERAKEERLNPELKEERIKNNVPETIDSKRVFD 70
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
ET+ + E DEF G PKIL+TT F ++ +PN +
Sbjct: 71 ETIAAEVEGE-------DEFQQYFNSGIEPKILLTTSEEAKKPAYEFADMVMDFLPNVTF 123
Query: 160 YKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
KR Y +K+I ++A +++T ++V++ ++++ + +I LP+GPT +F ++ +V K
Sbjct: 124 IKRKKEYSMKEIAKHAASREYTDLLVINEDKKKVTGITMIHLPEGPTFYFSITSIVEGKQ 183
Query: 219 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
IK HG + HIPELVLNNF TR+G VGR+ Q++FP SPE R+VVT HNQRD+IFFR
Sbjct: 184 IKGHGRASEHIPELVLNNFNTRMGKTVGRMFQTMFPHSPEIVARQVVTLHNQRDYIFFRR 243
Query: 279 HRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKT 338
H RYIF +E G
Sbjct: 244 H--------------------------------RYIFRNEEKVG---------------- 255
Query: 339 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL +Q G GE W H+P+M+ +R+F+L
Sbjct: 256 --------LQELGPQFTLKLRRMQKGI----RGETVWEHRPDMERDKRKFYL 295
>gi|71659749|ref|XP_821595.1| RNA processing factor 1 [Trypanosoma cruzi strain CL Brener]
gi|70886978|gb|EAN99744.1| RNA processing factor 1, putative [Trypanosoma cruzi]
Length = 330
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 186/363 (51%), Gaps = 66/363 (18%)
Query: 35 EILPSMI------KNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMT 88
E+ P+++ + K+S + +L+ QKK KR + +AR+ K +L E PA+
Sbjct: 27 EVDPALVELYRSTRQPVKKSQLFEQLREQKKDAKRVRREARERERK---QLKENAPAKAI 83
Query: 89 PRTIENTREPDETVCRPDDDELFAGNDAD-EFSSILKQGCAPKILITTCRFNSNRGPAFI 147
P+T E R PD T+ DD ++AD EF++ + P ILITT R F+
Sbjct: 84 PKTKERLRRPDVTIVEEKDDAEIVRDEADDEFAAYYNEARKPSILITTGEHPCFRTKQFV 143
Query: 148 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 207
E L + PNS Y R Y LK+I ++ ++FT ++V+ +EP L+I LP+GPTA
Sbjct: 144 KEALWLFPNSTYRPRKDYTLKEITQFCINREFTDLVVITDRLKEPYNLIISHLPEGPTAT 203
Query: 208 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 267
F+LS + +K+ T H PEL+ NF TRLG R+ R+++ LFP + ++ GR V TF
Sbjct: 204 FRLSNFMAHAQLKDPAPRTEHYPELIFKNFDTRLGRRIHRMLECLFPATRDYAGRAVATF 263
Query: 268 HNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANG 327
HNQRD+IF R H RYIF++ E+
Sbjct: 264 HNQRDYIFMRTH--------------------------------RYIFDSLEA------- 284
Query: 328 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 387
R+QE GPRFT++L+SLQ GTFDT+ GE+EW K E D+ +
Sbjct: 285 -----------------VRIQEMGPRFTMRLLSLQLGTFDTQFGEYEWFRKKEHDSDKLE 327
Query: 388 FFL 390
+++
Sbjct: 328 WYI 330
>gi|50288911|ref|XP_446885.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526194|emb|CAG59818.1| unnamed protein product [Candida glabrata]
Length = 294
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/356 (35%), Positives = 184/356 (51%), Gaps = 75/356 (21%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
IKNK KR + A++K QK E+ K AR E+ EL E+ +TI+N R DE
Sbjct: 8 IKNKLKRQELFAQIKDQKNKERHKMRHARSKEERENPELKEKRLKENVTKTIDNMRVYDE 67
Query: 101 TVCRP---DDDEL--FAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIP 155
T+ + D+D+L F + ++E PKIL+TT F + L+ ++P
Sbjct: 68 TIGKEIEGDEDDLMKFFNSSSNE---------PPKILLTTNVNAKKSAYEFANILIEILP 118
Query: 156 NSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
N + KR LK++ + K++FT I++++ N+++ L + LP+GP+ +FK+S V
Sbjct: 119 NVTFIKRKFGITLKEMTDICIKRNFTDIVIINENKKKVTGLTFMHLPEGPSFYFKISSFV 178
Query: 215 LRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFI 274
K I HG PT HIPEL+LNNF TRLG VGRL QS+FP++P+F GR+V+T HNQRD+I
Sbjct: 179 EVKKIVGHGKPTSHIPELILNNFQTRLGKTVGRLFQSIFPKNPDFEGRQVITLHNQRDYI 238
Query: 275 FFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAK 334
FFR H RY+F +E G
Sbjct: 239 FFRRH--------------------------------RYVFRNEEKVG------------ 254
Query: 335 SEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FT+KL +Q G + E EW H+PEMD +++F+L
Sbjct: 255 ------------LQELGPQFTMKLRRVQRGIKE----ETEWEHRPEMDKEKKKFYL 294
>gi|345482112|ref|XP_001607187.2| PREDICTED: probable ribosome production factor 1-like [Nasonia
vitripennis]
Length = 336
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 168/314 (53%), Gaps = 64/314 (20%)
Query: 86 RMTPRTIENTREPDETVCR-----PDDDELFAGNDADEFSSILKQGCAPKILITTCRFNS 140
+ P TIE+ RE DET+ D++E+ + DEF+ +Q PK+LIT
Sbjct: 78 KQVPHTIESLREKDETMIYGEIEDEDNEEVKIDMEHDEFAPYYRQEYEPKVLITYADNPH 137
Query: 141 NRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGL 200
+ F EL +IPNS R +KK+++ + +T IIV++ ++ +P+ +LI+ L
Sbjct: 138 TKTRIFGRELTRIIPNSTSLYRNRSGVKKMVKSCIENGYTDIIVINEDQCKPNGMLIVHL 197
Query: 201 PDGPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEF 259
P+GPT H KLS + + ++K +H T H PE+VLNNF TRLGH V R+ ++F PEF
Sbjct: 198 PEGPTMHCKLSNVKITPELKRSHKEITNHRPEVVLNNFTTRLGHSVARMFGAIFHHQPEF 257
Query: 260 RGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKE 319
+GRRVVTFHNQRD+IFFRHH RY F K
Sbjct: 258 KGRRVVTFHNQRDYIFFRHH--------------------------------RYEFNPKT 285
Query: 320 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV--- 376
K RL+E GPRFTL+L SLQHGTFD+K G +EW+
Sbjct: 286 GK-----------------------PRLRELGPRFTLRLRSLQHGTFDSKYGNYEWIIQG 322
Query: 377 HKPEMDTSRRRFFL 390
+ +++TSRR+FFL
Sbjct: 323 RRHQLETSRRKFFL 336
>gi|198475760|ref|XP_001357146.2| GA19804 [Drosophila pseudoobscura pseudoobscura]
gi|198137947|gb|EAL34213.2| GA19804 [Drosophila pseudoobscura pseudoobscura]
Length = 396
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/360 (38%), Positives = 197/360 (54%), Gaps = 74/360 (20%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTP-RTIENTRE 97
S+++NKE+R A++ K+K +K +K ++ +AR A + P TIE+ RE
Sbjct: 103 SLMRNKEQRLALYRKMKKEKHKKKMQERRARRKAG-----------VPVNPGHTIESLRE 151
Query: 98 PDET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSV 153
D+T + D++EL + D+FSS ++ PK+LIT + F EL +
Sbjct: 152 KDQTEVANLNDSDNEELQKELEIDDFSSYFERVYEPKVLITFADNPVTKTRKFGLELSRI 211
Query: 154 IPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKL 213
PN+ R +KKI + A++++FT +++++ +RR+P+ LL+I LP+GPTAHFKLS +
Sbjct: 212 FPNALVKIRNKASVKKICKSAEREEFTDVVIINEDRRKPNGLLVIHLPNGPTAHFKLSNV 271
Query: 214 VLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRD 272
L DIK +H T H PE++L NF TRLG VGR++ +LF PEF+GRR TFHNQRD
Sbjct: 272 KLTSDIKRDHKEITKHRPEVILTNFTTRLGLTVGRMLGALFHHDPEFKGRRAATFHNQRD 331
Query: 273 FIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKD 332
+IFFRHHR YE +KE GK+ K
Sbjct: 332 YIFFRHHR----------------------------YEF-----SKE-------GKRVK- 350
Query: 333 AKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 390
L+E GPRFTLKL SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 351 --------------LRELGPRFTLKLRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 396
>gi|195160036|ref|XP_002020882.1| GL14129 [Drosophila persimilis]
gi|194117832|gb|EDW39875.1| GL14129 [Drosophila persimilis]
Length = 398
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 138/360 (38%), Positives = 197/360 (54%), Gaps = 74/360 (20%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTP-RTIENTRE 97
S+++NKE+R A++ K+K +K +K ++ +AR A + P TIE+ RE
Sbjct: 105 SLMRNKEQRLALYRKMKKEKHKKKMQERRARRKAG-----------VPVNPGHTIESLRE 153
Query: 98 PDET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSV 153
D+T + D++EL + D+FSS ++ PK+LIT + F EL +
Sbjct: 154 KDQTEVANLNDSDNEELQKELEIDDFSSYFERVYEPKVLITFADNPVTKTRKFGLELSRI 213
Query: 154 IPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKL 213
PN+ R +KKI + A++++FT +++++ +RR+P+ LL+I LP+GPTAHFKLS +
Sbjct: 214 FPNALVKIRNKASVKKICKSAEREEFTDVVIINEDRRKPNGLLVIHLPNGPTAHFKLSNV 273
Query: 214 VLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRD 272
L DIK +H T H PE++L NF TRLG VGR++ +LF PEF+GRR TFHNQRD
Sbjct: 274 KLTSDIKRDHKEITKHRPEVILTNFTTRLGLTVGRMLGALFHHDPEFKGRRAATFHNQRD 333
Query: 273 FIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKD 332
+IFFRHHR YE +KE GK+ K
Sbjct: 334 YIFFRHHR----------------------------YEF-----SKE-------GKRVK- 352
Query: 333 AKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 390
L+E GPRFTLKL SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 353 --------------LRELGPRFTLKLRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 398
>gi|242009892|ref|XP_002425716.1| U3 small nucleolar ribonucleoprotein imp4, putative [Pediculus
humanus corporis]
gi|212509617|gb|EEB12978.1| U3 small nucleolar ribonucleoprotein imp4, putative [Pediculus
humanus corporis]
Length = 248
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/278 (40%), Positives = 162/278 (58%), Gaps = 60/278 (21%)
Query: 117 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
DE+SS ++ PK+LITT ++ F EL ++PNS R +KK+++ A +
Sbjct: 27 DEYSSYFEKSYVPKVLITTSDNPLSKTRRFCKELTRILPNSIAKYRHRMSVKKMVKAATE 86
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLN 235
++F+ II+V+ ++++P+ LL+I LPDGPTAHF+LS + L ++ K++ + H PE++LN
Sbjct: 87 RNFSDIIIVNEDQKQPNGLLLIHLPDGPTAHFRLSNVRLSNELGKHYKQISKHRPEVILN 146
Query: 236 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTIL 295
NF TRLG+ + R++ +LF PEF+GRR VTFHNQRD+IFFRHHR YM+T
Sbjct: 147 NFNTRLGYSISRMLAALFHYEPEFKGRRCVTFHNQRDYIFFRHHR---------YMFT-- 195
Query: 296 CSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 355
++AK RL E GPRFT
Sbjct: 196 -----------------------------------ENAKP----------RLMELGPRFT 210
Query: 356 LKLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 390
LKL SLQ GTFD+K GE+EW+ + EM+TSRR+FFL
Sbjct: 211 LKLRSLQLGTFDSKTGEYEWIIQGRRHEMETSRRKFFL 248
>gi|213409636|ref|XP_002175588.1| brix domain-containing protein Rpf1 [Schizosaccharomyces japonicus
yFS275]
gi|212003635|gb|EEB09295.1| brix domain-containing protein Rpf1 [Schizosaccharomyces japonicus
yFS275]
Length = 306
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/353 (37%), Positives = 193/353 (54%), Gaps = 53/353 (15%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I+NK R ++ ++ Q++ EK +K K R E++ EL E A P+TIE+ R DE
Sbjct: 4 IRNKIVRQNIYLQMLRQRQKEKLEKRKERKKEEEKNPELRETRLAENVPQTIESKRVYDE 63
Query: 101 TVCRPD-DDELFAGNDADEFSSIL-KQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
T+ + + D+EL A DE++S ++ APK+L+TT + S + F SELL PN+
Sbjct: 64 TLVQEEPDEELQAELQDDEYASYYNEERRAPKLLVTTSKRASRKAYEFASELLDCFPNAE 123
Query: 159 YYKR-GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRK 217
+ KR G ++ +I E A K+ +T ++V++ + + +AL ++ LP GP+ +F LS L L K
Sbjct: 124 FRKRTGNIEIHEIAEAASKRGYTDLLVLNEDHKVTNALTLVHLPSGPSFYFTLSSLQLAK 183
Query: 218 DIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
+I NHG TGHIPEL++NNF+TRLG V R QSLF Q P+ +GR+VVT H QRDF+FFR
Sbjct: 184 EISNHGRATGHIPELIINNFSTRLGITVARAFQSLFLQQPQIQGRQVVTIHCQRDFLFFR 243
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RY+F+ K S+ D G
Sbjct: 244 RH--------------------------------RYMFKEK-SQMPDGIGAG-------- 262
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GPRFT++L +Q G +D K GE + ++ RRRF+L
Sbjct: 263 ---------LQELGPRFTMRLRMVQRGIWDNKKGEVFFESNAGEESDRRRFWL 306
>gi|448105556|ref|XP_004200524.1| Piso0_003114 [Millerozyma farinosa CBS 7064]
gi|448108678|ref|XP_004201155.1| Piso0_003114 [Millerozyma farinosa CBS 7064]
gi|359381946|emb|CCE80783.1| Piso0_003114 [Millerozyma farinosa CBS 7064]
gi|359382711|emb|CCE80018.1| Piso0_003114 [Millerozyma farinosa CBS 7064]
Length = 293
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/351 (36%), Positives = 177/351 (50%), Gaps = 68/351 (19%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
IKNK++RS + A ++H+K + + K K R E+ EL A P TIE R DE
Sbjct: 10 IKNKQQRSRLFADIQHEKNLARHKARKERTKEERANPELKAARLAENIPDTIERKRVYDE 69
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
T+ DEFS+ K PKIL+TT F L+ ++PN+ +
Sbjct: 70 TIEA-------EEEGEDEFSACFKDAKDPKILLTTNANARKAAYEFADILMEILPNTTFV 122
Query: 161 KRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
KR Y++K+I + ++T ++V++ ++++ + L + LPDGPT +F +S LVL K I
Sbjct: 123 KRKREYNMKEIAQSCIAHEYTDLVVINEDKKKVNGLTFVHLPDGPTFYFSISSLVLSKKI 182
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
HG T HIPELVLNNF+T+LG VG L Q+LFP+ PEF GR+VVT HNQRD+IFFR H
Sbjct: 183 PGHGRATDHIPELVLNNFSTKLGKSVGTLFQALFPRKPEFEGRQVVTLHNQRDYIFFRRH 242
Query: 280 RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS 339
RYIF +E G
Sbjct: 243 --------------------------------RYIFRNEERVG----------------- 253
Query: 340 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTL+L +Q G E W HKP+MD +R+F+L
Sbjct: 254 -------LQELGPQFTLRLRRVQKGI----RNEVAWEHKPDMDRDKRKFYL 293
>gi|68470826|ref|XP_720420.1| likely nucleolar ribosomal biogenesis factor RPF1p [Candida
albicans SC5314]
gi|68471288|ref|XP_720192.1| likely nucleolar ribosomal biogenesis factor RPF1p [Candida
albicans SC5314]
gi|46442048|gb|EAL01340.1| likely nucleolar ribosomal biogenesis factor RPF1p [Candida
albicans SC5314]
gi|46442287|gb|EAL01577.1| likely nucleolar ribosomal biogenesis factor RPF1p [Candida
albicans SC5314]
gi|238881523|gb|EEQ45161.1| ribosome production factor 1 [Candida albicans WO-1]
Length = 296
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 119/353 (33%), Positives = 183/353 (51%), Gaps = 71/353 (20%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
IKNK++R V A++KH+K ++ K+ R E+ EL EE A P TI++ R DE
Sbjct: 12 IKNKQRRQKVFAEIKHEKNKQRHKQRAERAKEERENPELREERIAANIPDTIDSKRIYDE 71
Query: 101 TVCRP--DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
T+ DDE F+++L++ PKIL+TT F ++ +PN
Sbjct: 72 TIAAEVEGDDEF-----QSYFTNLLEE---PKILLTTSANAKKPAYEFADMIMDFLPNVT 123
Query: 159 YYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRK 217
+ KR Y ++ + +Y +DFT+++V++ ++++ + + +I LP+GPT +F ++ +V K
Sbjct: 124 FIKRKKEYTMQDMAKYCSNRDFTALLVINEDKKKVNGITLINLPEGPTFYFSITSIVDGK 183
Query: 218 DIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK HG ++PE+VLNNF +RLG VGRL QS+FP PE +GR+V+T HNQRD+IFFR
Sbjct: 184 RIKGHGKAGDYLPEIVLNNFNSRLGKTVGRLFQSIFPHKPELQGRQVITLHNQRDYIFFR 243
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RYIF +E G
Sbjct: 244 RH--------------------------------RYIFRNEEKVG--------------- 256
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL +Q G G+ W H+P+M+ +++F+L
Sbjct: 257 ---------LQELGPQFTLKLRRMQKGV----RGDVVWEHRPDMERDKKKFYL 296
>gi|19114780|ref|NP_593868.1| Brix domain protein Rpf1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|3183322|sp|O14180.1|YDS4_SCHPO RecName: Full=Brix domain-containing protein C4F8.04
gi|2330821|emb|CAB11051.1| Brix domain protein Rpf1 (predicted) [Schizosaccharomyces pombe]
Length = 306
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/358 (37%), Positives = 188/358 (52%), Gaps = 63/358 (17%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRA-----LELGEEPPARMTPRTIENT 95
IKNK R + K HQK +K ++ K R E++ L L E PA TIE+
Sbjct: 4 IKNKIVRQQQYMKALHQKNKDKLERRKERAKEEEKDPEKKRLRLSENIPA-----TIESK 58
Query: 96 REPDETVCRPD-DDELFAGNDADEFSSIL-KQGCAPKILITTCRFNSNRGPAFISELLSV 153
R DET+ D+EL A DEFS+ ++ PK+L+TT + S + F SELL
Sbjct: 59 RVYDETIIEDKPDEELQAELKDDEFSAYFSEERKVPKLLVTTSKRASRKCYDFASELLDC 118
Query: 154 IPNSHYYKR-GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSK 212
PN+ + KR G ++ +I E A K+ +T ++V++ +R++ +AL ++ LP+GP+ +F LS
Sbjct: 119 FPNAEFRKRTGDIEVHEIAEAAAKRGYTDLLVLNEDRKKTNALTLVHLPNGPSFYFTLSN 178
Query: 213 LVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRD 272
L K+I NHG TGHIPEL++NNF+TRLG V R QSLF Q+P+ +GR+VVT H QRD
Sbjct: 179 LQTAKEISNHGRSTGHIPELIINNFSTRLGMTVARAFQSLFIQTPQIQGRQVVTIHCQRD 238
Query: 273 FIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKD 332
F+FFR H RY F K S D G
Sbjct: 239 FLFFRRH--------------------------------RYAFREK-SNMPDGIG----- 260
Query: 333 AKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
T LQE GPRFT++L +Q G +D K GE + ++ RR+F+L
Sbjct: 261 ------------TGLQELGPRFTMRLRMVQKGVWDRKEGEVFFESNAGEESDRRKFWL 306
>gi|156083867|ref|XP_001609417.1| RNA processing factor 1 [Babesia bovis T2Bo]
gi|154796668|gb|EDO05849.1| RNA processing factor 1, putative [Babesia bovis]
Length = 301
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/309 (37%), Positives = 162/309 (52%), Gaps = 57/309 (18%)
Query: 83 PPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNR 142
P ++ P TIE+ R DET+ R DD E+ A DEF++ + PK+ +T+ R S +
Sbjct: 49 PEEKLEPLTIESMRRYDETMVRTDDAEIAAEERIDEFAAHFRGDREPKLYLTSSRRPSEK 108
Query: 143 GPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNR-REPDALLIIGLP 201
FI ELL +IPN +Y+ R L+ ++ +A F++I+++ + + P+ L I LP
Sbjct: 109 MRRFIKELLLIIPNIYYFARDENKLEDMVRHATDGGFSAILLITQGQGKLPNGLYICSLP 168
Query: 202 DGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRG 261
GPT F+L+ L++ D+K G+ T E++LN+F TRLG RVGR I SLFP PE
Sbjct: 169 YGPTTFFRLTSLLMASDMKGAGSFTESKCEIILNHFDTRLGRRVGRQIASLFPLDPELEA 228
Query: 262 RRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESK 321
RRV+TFHNQRD IFFRHHR Y+F
Sbjct: 229 RRVITFHNQRDMIFFRHHR--------------------------------YVFR----- 251
Query: 322 GSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEM 381
N KK L+E GPRFTLK+ S+Q GTF G FE+V +P+M
Sbjct: 252 ----NMKKCS---------------LKEIGPRFTLKVHSVQEGTFCLDKGLFEFVWRPDM 292
Query: 382 DTSRRRFFL 390
R+RFF+
Sbjct: 293 QVDRKRFFI 301
>gi|344229608|gb|EGV61493.1| Brix-domain-containing protein [Candida tenuis ATCC 10573]
Length = 295
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 175/351 (49%), Gaps = 68/351 (19%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I+NK++R ++A LKH+K K K R E+ L E+ A P T+++ R DE
Sbjct: 12 IRNKQRRQKLYADLKHEKNKAKHKARAERATEERNDPSLKEQRLADNVPETLDSKRVYDE 71
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
T+ + E DEF + PK+L+TT ++ F L+ +P+ +
Sbjct: 72 TIVEDMEGE-------DEFDAYFASDKPPKLLLTTSKYAKKPAYEFADLLMDFLPDVTFV 124
Query: 161 KRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
KR + + ++++ +++T +++++ ++ L I LP+GPT +F ++ + K I
Sbjct: 125 KRKPQFSINDMVKFCNNREYTDLVILNEFNKKVTGLTFIHLPEGPTFYFSITSVTEGKKI 184
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+ HG T H PEL+LNNF TRLG VGRL QSLFP+ PEF GR+V+T HNQRD+IFFR H
Sbjct: 185 RGHGRSTDHTPELILNNFNTRLGKTVGRLFQSLFPKKPEFEGRQVITLHNQRDYIFFRRH 244
Query: 280 RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS 339
RY+F+++E G
Sbjct: 245 --------------------------------RYLFKSEERVG----------------- 255
Query: 340 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL LQ G D E EW +PEM+ +R+F+L
Sbjct: 256 -------LQEIGPQFTLKLRRLQKGIRD----ETEWEFRPEMEKDKRKFYL 295
>gi|336363609|gb|EGN91989.1| hypothetical protein SERLA73DRAFT_191777 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381066|gb|EGO22218.1| hypothetical protein SERLADRAFT_472723 [Serpula lacrymans var.
lacrymans S7.9]
Length = 361
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 192/377 (50%), Gaps = 47/377 (12%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTRE 97
PS IKNK KR V K K K EK +K A+ E + ++ A PRT++NTRE
Sbjct: 8 PSSIKNKMKREEVAGKQKKAKNKEKLQKRMAQAKLEANDPAIKKKRLAENVPRTLDNTRE 67
Query: 98 PDETVCR----PD----------DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRG 143
D ++ PD +++ + +D FS PK+LITT S
Sbjct: 68 FDPSIPSSSKTPDGSLTVQQEELSNDIASDPFSDYFSFTQDPSIPPKVLITTSTKASKAT 127
Query: 144 PAFISELLSVIPNSHYYKRG---TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGL 200
F EL+ V P + Y +R Y++ KI +A K+ F + VV+ N ++P A+ ++ L
Sbjct: 128 FEFCDELVGVFPGAEYIRRKKGKGYEIGKIAGWAAKRGFKHLCVVNENGKKPTAITLVYL 187
Query: 201 PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR 260
P+GPTA+FKL+ + L I H T H PELVLNNFAT LGH VGR+ Q+LFP PEF+
Sbjct: 188 PNGPTAYFKLTSVELTSQIYGHARATSHHPELVLNNFATSLGHAVGRMFQTLFPPMPEFQ 247
Query: 261 GRRVVTFHNQRDFIFFRHHRC-------VPLEFISCYMWTILCSYLTSIMKAFCYYECRY 313
GR++VTFHNQRDF+FFR HR V L+ I +T+ ++ + A +
Sbjct: 248 GRQLVTFHNQRDFLFFRRHRYAFRSTEKVALQEIGP-RFTLKLRWVKKGLPAVHNFG--- 303
Query: 314 IFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEF 373
E + DA +A D ++ ++ K + + K ++
Sbjct: 304 --EAPKPPEIDAGTTEADDGDQDENAENKETPTVGQL-----------------PKDNDY 344
Query: 374 EWVHKPEMDTSRRRFFL 390
W+HKPE+DTSRR FFL
Sbjct: 345 LWIHKPELDTSRRTFFL 361
>gi|241954494|ref|XP_002419968.1| ribosome biogenesis protein, putative [Candida dubliniensis CD36]
gi|223643309|emb|CAX42183.1| ribosome biogenesis protein, putative [Candida dubliniensis CD36]
Length = 320
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 124/356 (34%), Positives = 188/356 (52%), Gaps = 77/356 (21%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
IKNK++R V A++KH+K ++ K+ R E+ EL EE A P TI++ R DE
Sbjct: 36 IKNKQRRQKVFAEIKHEKNKQRHKQRAERAKEERDNPELREERIAANIPDTIDSKRIYDE 95
Query: 101 TVCRP--DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSN-RGPA--FISELLSVIP 155
T+ DDE F+++L++ PKIL+TT N+N + PA F ++ +P
Sbjct: 96 TIAAEVEGDDEF-----QSYFTNLLEE---PKILLTT---NANAKKPAYEFADMIMDFLP 144
Query: 156 NSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
N + KR Y ++ + +Y + FT++IV++ ++++ + + +I LP+GPT +F +S +V
Sbjct: 145 NVTFIKRKKEYTMQDMAKYCSNRGFTALIVINEDKKKVNGITLINLPEGPTFYFSVSSIV 204
Query: 215 LRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFI 274
K IK HG ++PE+VLNNF +RLG VGRL QS+FP PE +GR+V+T HNQRD+I
Sbjct: 205 DGKRIKGHGKAGDYLPEIVLNNFNSRLGKTVGRLFQSIFPHKPELQGRQVITLHNQRDYI 264
Query: 275 FFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAK 334
FFR H RYIF +E G
Sbjct: 265 FFRRH--------------------------------RYIFRNEEKVG------------ 280
Query: 335 SEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL +Q G G+ W H+P+M+ +++F+L
Sbjct: 281 ------------LQELGPQFTLKLRRMQKGV----RGDIVWEHRPDMERDKKKFYL 320
>gi|449548069|gb|EMD39036.1| hypothetical protein CERSUDRAFT_93076 [Ceriporiopsis subvermispora
B]
Length = 396
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/397 (34%), Positives = 194/397 (48%), Gaps = 52/397 (13%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTRE 97
PS IKNK KR + KLK +K+ K ++ A+ E L + A+ PRT++NTRE
Sbjct: 8 PSTIKNKLKREEIAQKLKKEKRQGKLQRRLAQAKVEANDPALKKRRQAQNVPRTLDNTRE 67
Query: 98 PDETVC-----------------------RPDDDELFAGND-----------ADEFSSIL 123
D ++ +P+ D D A FS L
Sbjct: 68 YDPSILTANPAASSSSSVQPEASTSAAVQKPEIDPSLQPQDESAADIESDPFAAYFSGAL 127
Query: 124 KQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFT 180
PK+LITT + F EL+SV P + +++R +++ KI +A + ++
Sbjct: 128 DPSVPPKVLITTSPKATRVSYEFCEELVSVFPGAEFHRRPKGRGFEMGKIAGWAAGRGYS 187
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 240
++VV+ N ++P+A+ +I LP+GPTA+FKL+ + L K I H T H PELVLN F TR
Sbjct: 188 HMMVVNENTKKPNAITMIYLPNGPTAYFKLTSIELAKQIHGHARSTAHHPELVLNGFVTR 247
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRC-------VPLEFISCYMWT 293
LGH VGRL Q+LFP PEF+GR+VVT HNQRDF+FFR HR V L+ I
Sbjct: 248 LGHTVGRLFQTLFPPMPEFQGRQVVTLHNQRDFLFFRRHRYAFRSTEKVALQEIGPRFTL 307
Query: 294 ILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPR 353
L S + + E E ++ K +D +E + +Q+ QE G
Sbjct: 308 KLRSLRKGLPAVKNFGEPTKSLEF--DNFAEDEDKDVEDNDAEMSGEQEE----QESGD- 360
Query: 354 FTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
T S Q ++ W KPE++T+RR FFL
Sbjct: 361 -TKADQSAQPKVTPPTEDQYLWTWKPELETTRRTFFL 396
>gi|85000735|ref|XP_955086.1| RNA processing factor [Theileria annulata strain Ankara]
gi|65303232|emb|CAI75610.1| RNA processing factor, putative [Theileria annulata]
Length = 267
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/228 (46%), Positives = 140/228 (61%), Gaps = 6/228 (2%)
Query: 54 LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAG 113
L+ QKK +KR + + R E R + P R TP TIE+ R DET+ P+D E+
Sbjct: 45 LRTQKKKQKRIERRKRKEDEIRGI-----PVIRKTPHTIESLRRFDETIVDPEDVEVKFE 99
Query: 114 NDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEY 173
DEFS + PK+LIT+ R S + ++ ELL V+ NS Y+ R Y LK+++++
Sbjct: 100 EQIDEFSDHFSRNITPKLLITSTRRPSEKMRTYMKELLLVLSNSFYFAREEYKLKEVVKH 159
Query: 174 AKKKDFTSIIVV-HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPEL 232
AK+ FTSI++V + + P+ L I LP GPT FKL+ L L ++K G PE+
Sbjct: 160 AKENGFTSILLVTQGSNKLPNGLYICSLPRGPTTFFKLTSLKLASEMKGAGVLVATKPEI 219
Query: 233 VLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHR 280
VLN+F TRLG R+GR I SLF PEF GRRV+TFHNQRD IFFRHHR
Sbjct: 220 VLNSFNTRLGRRIGRQIASLFSLDPEFEGRRVITFHNQRDMIFFRHHR 267
>gi|149237234|ref|XP_001524494.1| ribosome production factor 1 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452029|gb|EDK46285.1| ribosome production factor 1 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 294
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 186/354 (52%), Gaps = 73/354 (20%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRA-LELGEEPPARMTPRTIENTREPD 99
IKNK++R V+ +K K+ ++R +L+A A E+R EL E+ A P TIE+ R D
Sbjct: 10 IKNKQRRQKVYGDIKRAKE-KQRHQLRAERAKEERLNPELREQRIAENVPDTIESKRIYD 68
Query: 100 ETVCRPDDDELFAGND--ADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNS 157
ET+ + GND A+ F ++ K+ PKIL+TT F L+ +PN
Sbjct: 69 ETIAQE-----VEGNDEFAEYFENLTKE---PKILLTTNVNAKKAAYEFADMLMDFLPNV 120
Query: 158 HYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLR 216
+ KR ++++ + ++ +++T++I+++ ++++ + + +I LP+GPT +F ++ +V
Sbjct: 121 TFIKRKKDFNIQDMAKFCSNREYTTLIIINEDKKKVNGMTLINLPEGPTFYFSITSIVDG 180
Query: 217 KDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFF 276
K IK HG T HIPELVLNNF TRLG VGRL QS+FP PE +GR+V+T HNQRD+IF
Sbjct: 181 KRIKGHGRATDHIPELVLNNFNTRLGKTVGRLFQSIFPHRPELQGRQVITLHNQRDYIFL 240
Query: 277 RHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSE 336
R H RY+F +E G
Sbjct: 241 RRH--------------------------------RYVFRNEEKVG-------------- 254
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL +Q G G+ W KP+M+ +++F+L
Sbjct: 255 ----------LQELGPQFTLKLRRMQKGV----RGDVVWEFKPDMERDKKKFYL 294
>gi|395331828|gb|EJF64208.1| Brix-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 383
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 198/396 (50%), Gaps = 63/396 (15%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTRE 97
PS IKNK KR + K K +K+ K ++ A+ AE L ++ + PRT++NTRE
Sbjct: 8 PSSIKNKVKREEIARKQKKEKRQGKLQRRLAQAKAEADDPLLKKKRLTQNVPRTLDNTRE 67
Query: 98 ---------------------------PDETVCRPDDD---ELFAGNDADEFSSILKQGC 127
D+ V +P+D+ ++ A A+ FS L
Sbjct: 68 YDPSMLTANPNAEPEAGPSSLPQEGEETDQPVVQPEDESAADIAADPFAEYFSGALDPST 127
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG---TYDLKKIIEYAKKKDFTSIIV 184
PK+LITT + F EL+ V P + + +R +++ +I +A +D++ ++V
Sbjct: 128 PPKVLITTSPKATRLTYDFCDELVGVFPGAEFIRRKKGKGFEMGRIAGWAANRDYSHLVV 187
Query: 185 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 244
V+ + ++P+AL ++ LP+GPTA+FKL+ + L + I H T H PELVLN F TRLGH
Sbjct: 188 VNEDMKKPNALTVVHLPEGPTAYFKLTSIELSQQISGHARSTAHFPELVLNGFVTRLGHT 247
Query: 245 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRC-------VPLEFISCYMWTILCS 297
VGRL Q+ FP PEF+GR+VVT HNQRDF+FFR HR V L+ I +T+
Sbjct: 248 VGRLFQTFFPPMPEFQGRQVVTLHNQRDFLFFRRHRYAFRSTEKVALQEIGP-RFTLKLR 306
Query: 298 YL---TSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 354
YL +K F+T G D ++ KDA E + I E G +
Sbjct: 307 YLKKGLPAVKNLGAPSKPLEFDT----GEDEEAER-KDAPEEGMA----IDGESEAGKKK 357
Query: 355 TLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L E+ W+ KPE++T+RR FFL
Sbjct: 358 VLPPTD----------DEYLWIWKPELETTRRTFFL 383
>gi|363755824|ref|XP_003648128.1| hypothetical protein Ecym_8015 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891328|gb|AET41311.1| Hypothetical protein Ecym_8015 [Eremothecium cymbalariae
DBVPG#7215]
Length = 292
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/351 (33%), Positives = 173/351 (49%), Gaps = 67/351 (19%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
IKNK KR + A+LK Q+ E+ K + R E+ +L E P+TI++ R DE
Sbjct: 8 IKNKMKRKQLFAELKDQQNKERHKMRRLRAKEEREDQDLKEARLQNNVPKTIDSMRVYDE 67
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
T+ + + D D+ + PKIL+TT + F + L+ + PN +
Sbjct: 68 TIGQEIE------GDKDDLMKVFNSNEPPKILLTTNVNAKKKAYEFANVLIEIFPNVTFV 121
Query: 161 KRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
KR Y LK+I+ + +++T +++++ ++++ L + LP GPT +FK+S + + I
Sbjct: 122 KRQFGYTLKEIVGFCNNRNYTDLVIINEDKKKVTGLTFVHLPAGPTFYFKVSSYLEVEKI 181
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
HG PT HIPEL+LNNF TRLG VG L QS+FPQ P+F GR+V+T HNQRD+IFFR H
Sbjct: 182 VGHGRPTSHIPELILNNFNTRLGKTVGTLFQSIFPQKPDFEGRQVITLHNQRDYIFFRRH 241
Query: 280 RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS 339
RY+F + G G
Sbjct: 242 --------------------------------RYVFRNEVKVGLQELG------------ 257
Query: 340 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
P+FTLKL LQ G + E EW HKP+MD +++F+L
Sbjct: 258 ------------PQFTLKLKRLQKGIKE----ETEWEHKPDMDKEKKKFYL 292
>gi|291000850|ref|XP_002682992.1| predicted protein [Naegleria gruberi]
gi|284096620|gb|EFC50248.1| predicted protein [Naegleria gruberi]
Length = 268
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 163/311 (52%), Gaps = 57/311 (18%)
Query: 92 IENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPA------ 145
+E + DE V + + L D DEF K G PK+LITT ++N+ A
Sbjct: 1 LEYLKNFDEQVHKSKQETLAEEEDIDEFEEYFKNGKEPKVLITT-QYNAMLDKAKNASKF 59
Query: 146 ---FISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 202
FI ELL+ IPNS Y KR Y +K++IEYA+K DFT +IV+ +P + L+I LP
Sbjct: 60 TMTFIKELLNCIPNSFYMKRKHYYVKQVIEYAEKNDFTDVIVIGERNNKPSSCLLIHLPT 119
Query: 203 GPTAHFKLSKLVLRKDIKNHGNPTGHI-----PELVLNNFATRLGHRVGRLIQSLFPQSP 257
GP A F+LS L+KD++N + PEL+LNNF TRLG+RV R+ Q++FPQ P
Sbjct: 120 GPCATFRLSFPKLKKDLRNIAKVDRNYCQKFYPELILNNFTTRLGYRVARMFQAIFPQKP 179
Query: 258 EFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFET 317
F GRRVVT HNQRDFIFFRHH + +Y
Sbjct: 180 NFTGRRVVTMHNQRDFIFFRHH-------------------------IYNFY-------- 206
Query: 318 KESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH 377
D + K AKS ++ ++QE GPR T +L SLQ G FD GEFEW
Sbjct: 207 ------DVDEKNKDRAKSVTVTKG---VKIQEVGPRVTFRLQSLQLGKFDNLFGEFEWYG 257
Query: 378 KPEMDTSRRRF 388
+ E+ +++F
Sbjct: 258 RNELVVDKKQF 268
>gi|154339712|ref|XP_001565813.1| ribosome biogenesis protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063131|emb|CAM45331.1| ribosome biogenesis protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 330
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/346 (32%), Positives = 176/346 (50%), Gaps = 60/346 (17%)
Query: 46 KRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRP 105
++S + ++ QKK KR + R++ E L L ++ P + TP+T E R D T+
Sbjct: 44 RKSQLFTEILKQKKDTKRAR---RESRENERLHLKDKAPVKATPKTKERKRRVDVTILEN 100
Query: 106 DDDELFAGNDAD-EFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 164
+D ++AD EF++ + P+ LITT R + ELL ++PNS Y R +
Sbjct: 101 KEDAEIINDEADDEFAAFFRDRQNPRTLITTGEHPCFRTKQLVKELLWLVPNSIYRPRKS 160
Query: 165 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 224
Y LK+I ++ ++FT+++VV +EP L++ LP+GPTA F++S + +++
Sbjct: 161 YTLKEITQFCCNREFTNLLVVTDRIKEPHNLIVSHLPEGPTATFRVSNFLSYAQLEDPAP 220
Query: 225 PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPL 284
T H PEL+ NF TRLG R+ R+++ LFP + ++ GR V TF NQRD+IF R H
Sbjct: 221 RTEHYPELIFKNFDTRLGRRIARMLECLFPATRDYAGRAVATFLNQRDYIFLRTH----- 275
Query: 285 EFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVI 344
RYIF++ ++
Sbjct: 276 ---------------------------RYIFDSLKA------------------------ 284
Query: 345 TRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
RLQE GPRFTL+L+SLQ GTFD + GE+EW K E D +++
Sbjct: 285 VRLQEMGPRFTLRLLSLQSGTFDRQFGEYEWYRKKEHDADTLEWYM 330
>gi|354547802|emb|CCE44537.1| hypothetical protein CPAR2_403400 [Candida parapsilosis]
Length = 296
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/353 (34%), Positives = 180/353 (50%), Gaps = 70/353 (19%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRA-LELGEEPPARMTPRTIENTREPD 99
IKNK++R V+A +K QK V+ R KL+A A E+R EL E+ A P TI++ R D
Sbjct: 11 IKNKQRRQQVYADIKRQK-VKDRHKLRAERADEERNNPELREQRIAENIPATIDSKRVYD 69
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSH 158
ET+ + D DEFS PKIL+TT F L+ +PN+
Sbjct: 70 ETLSAKIE------GDEDEFSEYFTNLSKDPKILLTTNIGAKKPAYEFADMLMDFLPNTT 123
Query: 159 YYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRK 217
+ KR ++++ + ++ +++T + +++ ++++ L ++ LP+GPT +F +S ++ K
Sbjct: 124 FVKRKKDFNIQDMAKFCSNREYTLLAIINEDKKKVTGLTLVNLPEGPTFYFSISSIIDGK 183
Query: 218 DIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK HG T HIPELVLNNF TRLG VGRL QS+FP PE +GR+V+T HNQRD+IF R
Sbjct: 184 RIKGHGVATDHIPELVLNNFNTRLGKTVGRLFQSVFPHKPELQGRQVITLHNQRDYIFLR 243
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RY+F +E G
Sbjct: 244 RH--------------------------------RYVFRNEEKVG--------------- 256
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL +Q G G+ W +P+M+ +R+F+L
Sbjct: 257 ---------LQELGPQFTLKLRRMQKGV----KGDVVWEFRPDMERDKRKFYL 296
>gi|448530428|ref|XP_003870061.1| Rpf1 nucleolar protein [Candida orthopsilosis Co 90-125]
gi|380354415|emb|CCG23930.1| Rpf1 nucleolar protein [Candida orthopsilosis]
Length = 296
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/353 (34%), Positives = 180/353 (50%), Gaps = 70/353 (19%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRA-LELGEEPPARMTPRTIENTREPD 99
IKNK++R V+A +K QK V+ R KL+A A E+R EL E+ A P TI++ R D
Sbjct: 11 IKNKQRRQQVYADIKRQK-VKDRHKLRAERADEERNNPELREQRIAENIPATIDSKRVYD 69
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSH 158
ET+ + D DEFS P+IL+TT F L+ +PN+
Sbjct: 70 ETLSAKIE------GDEDEFSEYFTNLAKDPQILLTTNIGAKKPAYEFADMLMDFLPNTT 123
Query: 159 YYKRGT-YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRK 217
+ KR ++++ + ++ +++T + +++ ++++ L ++ LP+GPT +F +S +V K
Sbjct: 124 FVKRKKEFNIQDMAKFCSNREYTLLAIINEDKKKVTGLTLVNLPEGPTFYFSISSIVDGK 183
Query: 218 DIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
IK HG T HIPELVLNNF TRLG VGRL QS+FP PE +GR+V+T HNQRD+IF R
Sbjct: 184 RIKGHGVATDHIPELVLNNFNTRLGKTVGRLFQSIFPHKPELQGRQVLTLHNQRDYIFLR 243
Query: 278 HHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEK 337
H RY+F +E G
Sbjct: 244 RH--------------------------------RYVFRNEEKVG--------------- 256
Query: 338 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL +Q G G+ W +P+M+ +R+F+L
Sbjct: 257 ---------LQELGPQFTLKLRRMQKGV----KGDVVWEFRPDMERDKRKFYL 296
>gi|145540062|ref|XP_001455721.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423529|emb|CAK88324.1| unnamed protein product [Paramecium tetraurelia]
Length = 338
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 125/355 (35%), Positives = 180/355 (50%), Gaps = 68/355 (19%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNKEKR + + ++++K K+ + K +DA R ++ P TI++ RE
Sbjct: 49 SRIKNKEKRIQILERKQNEQKKTKKMERKEKDANPDRE---------KLGPLTIDDKREI 99
Query: 99 DETVCRPDDDELFAGNDA--DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI-P 155
DE +DD+ N+ DEF + ++G PKI+ITT S + F+ ++ V P
Sbjct: 100 DENFVFDEDDQEELQNEELIDEFQNYFQEGQDPKIIITTSERPSRQLFDFLKDVKDVFGP 159
Query: 156 NSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVL 215
+HY+ R + LK+I EY+ K +T ++V +R+E L+ + LP GPT FKL+
Sbjct: 160 ETHYWPRKQFSLKEIQEYSINKGYTELLVFREHRKEVSQLIYVHLPAGPTYKFKLTNYTP 219
Query: 216 RKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 275
+I +HG T H PEL+LN F T++G RVGR + +LFP P+FRGRRVVTFHNQRDFIF
Sbjct: 220 CDEIHHHGRFTDHNPELILNQFNTKVGRRVGRGLAALFPSKPQFRGRRVVTFHNQRDFIF 279
Query: 276 FRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKS 335
FRHH RY+F+ + K +
Sbjct: 280 FRHH--------------------------------RYMFQEEGQKVA------------ 295
Query: 336 EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GPRFTL+L L+ G F+ GE E+ + + R FL
Sbjct: 296 -----------LQELGPRFTLQLKQLKMGLFND-DGEIEFEARDDYYVKRTAAFL 338
>gi|254574286|ref|XP_002494252.1| Nucleolar protein involved in the assembly of the large ribosomal
subunit [Komagataella pastoris GS115]
gi|238034051|emb|CAY72073.1| Nucleolar protein involved in the assembly of the large ribosomal
subunit [Komagataella pastoris GS115]
gi|328353925|emb|CCA40322.1| Brix domain-containing protein F44G4.1 [Komagataella pastoris CBS
7435]
Length = 293
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 174/355 (49%), Gaps = 69/355 (19%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTRE 97
P ++N+ +R + AK K ++ + ++ R E+ EL + A P TIE+ R
Sbjct: 6 PIRVRNRLRRKELFAKYKDERNKRRHEERAERTKEERENPELKAKRLAENVPNTIESMRV 65
Query: 98 PDETVCRPDDDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPN 156
DETV + EL DEFS + PK+L+TT G F L +P
Sbjct: 66 FDETV----NAEL---EGTDEFSEYFENTDKDPKVLVTTSENPKKNGLIFAKMLQDFLPG 118
Query: 157 SHYYKRGT-YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVL 215
S + +R Y +K + Y + F+ +IVV+ ++ + + I LP GPT +F ++ ++
Sbjct: 119 SVFVERKEKYTMKDMASYCSNRQFSDLIVVNEDKNKVTGITFIHLPTGPTFYFSVTNIIE 178
Query: 216 RKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 275
K I HGNPT HIPEL+LNNF+TRLG VGRL QSLFP P+F+GR+VVT HNQRDFIF
Sbjct: 179 SKKIAGHGNPTSHIPELILNNFSTRLGQTVGRLFQSLFPHRPQFQGRQVVTLHNQRDFIF 238
Query: 276 FRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKS 335
FR H RY F+ ++ G
Sbjct: 239 FRRH--------------------------------RYKFKNEKRVG------------- 253
Query: 336 EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FT+KL +Q G + E +W HKP MD +++F+L
Sbjct: 254 -----------LQELGPQFTMKLRRVQKGIRE----EIDWEHKPSMDRDKKKFYL 293
>gi|255721589|ref|XP_002545729.1| ribosome production factor 1 [Candida tropicalis MYA-3404]
gi|240136218|gb|EER35771.1| ribosome production factor 1 [Candida tropicalis MYA-3404]
Length = 295
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 187/356 (52%), Gaps = 77/356 (21%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
IKNK++R V A+LKH+K E+ K R E+ EL E+ A P TI++ R DE
Sbjct: 11 IKNKQRRQKVFAELKHEKNKERHKLRSERAKEERLNPELREQRIAENIPATIDSKRVFDE 70
Query: 101 TVCRP--DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSN-RGPA--FISELLSVIP 155
T+ DDE + F ++L++ PKIL+TT N+N + PA F ++ +P
Sbjct: 71 TIAAEVEGDDEF-----GNYFRNLLEE---PKILLTT---NANAKKPAYEFADMIMDFLP 119
Query: 156 NSHYYKRGT-YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
N+ + KR Y ++ + ++ + +T+++V++ ++++ + + +I LP+GPT +F ++ +
Sbjct: 120 NTTFIKRKKEYTMQDMAKFCSNRGYTTLMVINEDKKKVNGITMINLPEGPTFYFSVTSIT 179
Query: 215 LRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFI 274
K IK HG ++PE++LNNF +RLG VGRL QS+FP PE +GR+V+T HNQRD+I
Sbjct: 180 DGKRIKGHGKAGDYLPEIILNNFNSRLGKTVGRLFQSIFPHKPELQGRQVITLHNQRDYI 239
Query: 275 FFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAK 334
FFR H RYIF +E G
Sbjct: 240 FFRRH--------------------------------RYIFRNEEKVG------------ 255
Query: 335 SEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GP+FTLKL +Q G G+ W H+P+M+ +R+F+L
Sbjct: 256 ------------LQELGPQFTLKLRRMQKGV----RGDVVWEHRPDMERDKRKFYL 295
>gi|323333249|gb|EGA74647.1| Rpf1p [Saccharomyces cerevisiae AWRI796]
gi|323348253|gb|EGA82502.1| Rpf1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 263
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/330 (36%), Positives = 168/330 (50%), Gaps = 75/330 (22%)
Query: 67 KARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRP---DDDEL--FAGNDADEFSS 121
+ R E+ EL E+ +TIENTR DET+ + D+D+L + ++++E
Sbjct: 3 RKRAKEERENPELREQRLKENVTQTIENTRVYDETINKEVEGDEDDLMRYFNSNSNE--- 59
Query: 122 ILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFT 180
PKI +TT F + L+ ++PN + KR Y LK+I + K++FT
Sbjct: 60 ------PPKIFLTTNVNAKKSAYEFANILIEILPNVTFVKRKFGYKLKEISDICIKRNFT 113
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 240
I++++ ++++ L I LP+GPT +FKLS V K I HG PT HIPEL+LNNF TR
Sbjct: 114 DIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFVEVKKIVGHGRPTSHIPELILNNFQTR 173
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLT 300
LG VGRL QS+ PQ+P+ GR+V+T HNQRD+IFFR H
Sbjct: 174 LGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYIFFRRH--------------------- 212
Query: 301 SIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 360
RY+F+ E G LQE GP+FTLKL
Sbjct: 213 -----------RYVFKDNERVG------------------------LQELGPQFTLKLKR 237
Query: 361 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQ G + E EW HKPEMD +++F+L
Sbjct: 238 LQRGIKE----ETEWEHKPEMDKEKKKFYL 263
>gi|241997904|ref|XP_002433595.1| U3 small nucleolar ribonucleoprotein imp4, putative [Ixodes
scapularis]
gi|215495354|gb|EEC04995.1| U3 small nucleolar ribonucleoprotein imp4, putative [Ixodes
scapularis]
Length = 232
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 153/287 (53%), Gaps = 65/287 (22%)
Query: 113 GNDADEFSSILKQGCAP--------KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 164
+ ADE+ S+ K+ + + + R R F EL IP++ + R
Sbjct: 2 ADQADEYVSVHKRNISQIKNKKRRLEEYLKLKREKQKRTIKFCRELKQSIPDAEFRWRNR 61
Query: 165 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 224
+KK +E A ++ ++ I +++ +RR P+ LL+ LPDGPTA+F+LS + KDIK +
Sbjct: 62 SRIKKTVEQAVERGYSDIAIINEDRRHPNGLLLTHLPDGPTAYFRLSSVKFCKDIKKRAS 121
Query: 225 PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPL 284
T H PE++LNNF TRLGH V R++ SLF P+F+GRRVVTFHNQRD+IFFRHHR
Sbjct: 122 YTAHRPEVILNNFNTRLGHSVARMLASLFHYDPQFQGRRVVTFHNQRDYIFFRHHR---- 177
Query: 285 EFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVI 344
YE R +E+ + Q
Sbjct: 178 ------------------------YEFR---------------------NAERVNIQ--- 189
Query: 345 TRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
E GPRFTL+L SLQ GTFD+K GE+EWV K EM+TSRRRFFL
Sbjct: 190 ----EIGPRFTLRLKSLQKGTFDSKFGEYEWVLKRHEMETSRRRFFL 232
>gi|388579465|gb|EIM19788.1| Brix-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 359
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 169/369 (45%), Gaps = 121/369 (32%)
Query: 85 ARMTPRTIENTREPDETV--CRP------------------------DDDELFAGNDADE 118
++ P T++NTRE D T+ +P DD EL + D
Sbjct: 49 SKNVPNTLDNTREFDATIPQAQPVTQDNDQSQEEQPDNGGTSDALGTDDPELASDIANDA 108
Query: 119 FSSILKQGCA-----------PKILITTCRFNSNRGPAFISELLSVIPNSHYYKR---GT 164
F++ PKILITT F +L SV+PNS Y KR
Sbjct: 109 FATYFTPQLVNPDDPNSPIKLPKILITTSVGAGKNSIEFCMDLTSVLPNSEYVKRRGGKG 168
Query: 165 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 224
Y++ I +AKK+D+T ++V++ + + P+A+ ++ LP GPTA+FKLS + L K I H
Sbjct: 169 YEIATIAGWAKKRDYTDMMVINEDHKTPNAITLMHLPYGPTAYFKLSSVKLSKAITGHAR 228
Query: 225 PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPL 284
PT H PELVLNNFATRLGH VGR+ Q+LFP PEF GR+V TFH QRDFIFFR H
Sbjct: 229 PTPHHPELVLNNFATRLGHTVGRMFQALFPPVPEFEGRQVATFHVQRDFIFFRRH----- 283
Query: 285 EFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVI 344
RY F++ E
Sbjct: 284 ---------------------------RYAFKSTEK------------------------ 292
Query: 345 TRLQECGPRFTLKLVSLQHGTFDTK-----------------------GGEFEWVHKPEM 381
T LQE GPRFTLKL ++ G K G EF+W KPE+
Sbjct: 293 TALQEIGPRFTLKLRWMKRGLPSIKYEVDNRPTEARLANAADNDNGNDGFEFQW--KPEL 350
Query: 382 DTSRRRFFL 390
+TSRR+FFL
Sbjct: 351 ETSRRKFFL 359
>gi|401424267|ref|XP_003876619.1| putative RNA processing factor 1 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492862|emb|CBZ28140.1| putative RNA processing factor 1 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 330
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 157/313 (50%), Gaps = 57/313 (18%)
Query: 79 LGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDAD-EFSSILKQGCAPKILITTCR 137
L E+ P + TP+T E R D T+ +D ++AD EF++ + PK LITT
Sbjct: 74 LKEKAPVKATPKTKERKRRVDATIIEDKEDAEIINDEADDEFAAFFRDRKTPKTLITTGE 133
Query: 138 FNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLI 197
R + ELL ++PNS Y R +Y LK+I + ++FT ++VV +EP L++
Sbjct: 134 HPCFRTKQLVKELLWLVPNSIYRPRKSYTLKEITLFCCNREFTDLLVVTDRIKEPHNLIV 193
Query: 198 IGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSP 257
LP+GPTA F++S + +++ T H PEL+ NF TRLG R+ R+++ LFP +
Sbjct: 194 SHLPEGPTATFRVSNFLSYAQLEDPAPRTEHYPELIFKNFDTRLGRRISRMLECLFPATR 253
Query: 258 EFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFET 317
++ GR V TFHNQRD+IF R H RYIF+
Sbjct: 254 DYAGRAVATFHNQRDYIFLRTH--------------------------------RYIFDG 281
Query: 318 KESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH 377
E+ RLQE GPRFTL+L+SLQ GTFD + GE+EW
Sbjct: 282 LEA------------------------VRLQEMGPRFTLRLLSLQSGTFDRQFGEYEWYR 317
Query: 378 KPEMDTSRRRFFL 390
K E D +++
Sbjct: 318 KKEHDADTLEWYM 330
>gi|430813396|emb|CCJ29275.1| unnamed protein product [Pneumocystis jirovecii]
Length = 306
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 162/303 (53%), Gaps = 57/303 (18%)
Query: 89 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 148
P TIE+ RE ++ V + +++E+ D + F SI PK LITT + S + +F
Sbjct: 59 PHTIESKREANKNVFQEENEEIERKLDEETFESINDPKYIPKTLITTSKRPSKQTYSFAR 118
Query: 149 ELLSVIPNSHYYKRGT-YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 207
EL+ + P+S + KRG +++ KI Y K+ ++++I V+ NR+ PD+L +I LP GP+ +
Sbjct: 119 ELIDLFPHSTFIKRGVQFEIDKIAMYCAKRGYSNLIFVNENRKMPDSLTVIHLPSGPSFY 178
Query: 208 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 267
F LS + + I HG T HIPEL+++NF T+LG VGR+ +SLFP P+F GR+VVT
Sbjct: 179 FTLSSITPIRCIYQHGRATSHIPELIISNFTTKLGLVVGRMFRSLFPAQPDFEGRQVVTI 238
Query: 268 HNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANG 327
HNQRDFIF R H RYIF+ + G
Sbjct: 239 HNQRDFIFVRRH--------------------------------RYIFKNEMKVG----- 261
Query: 328 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 387
LQE GP+FTL+L +Q G +D G + + +KP +++RRR
Sbjct: 262 -------------------LQELGPQFTLRLRLMQRGIYDKDGNDIIFKNKPGEESNRRR 302
Query: 388 FFL 390
F+L
Sbjct: 303 FWL 305
>gi|402223735|gb|EJU03799.1| Brix-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 353
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 187/401 (46%), Gaps = 105/401 (26%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S I+NK KR V+ + + + EK ++ R AEK EL + P+T++N RE
Sbjct: 9 SDIRNKHKRQDVYRRRLKEGRQEKLRRRLERAKAEKEDPELRKARLHHNIPKTLDNMREY 68
Query: 99 DETVCRPD-------------------DDELFAGND--ADEFSSILKQGCAPKILITTCR 137
D ++ + L ND A FSS APK+L+TT
Sbjct: 69 DPSMLTASSQAHPQSSTAAHVGREMHPESALDIQNDPFAAYFSSENDPTLAPKVLVTTST 128
Query: 138 FNSNRGPAFISELLSVIPNSHYYKR---GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDA 194
+N F EL + P + + +R + + KI E++ K+ +++++VV+ + + P+A
Sbjct: 129 KATNVTYEFCHELCGIFPGAQFVRRKKGQDFQIGKIAEWSAKRGYSALLVVNEDHKVPNA 188
Query: 195 LLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP 254
+ ++ LPDGP+A FKLS + L KDI HG +GH PELVLN F TRLGH VGR+ Q LFP
Sbjct: 189 ITLVHLPDGPSALFKLSSIRLSKDIIGHGRSSGHHPELVLNGFVTRLGHAVGRMFQILFP 248
Query: 255 QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYI 314
PEF GR+ VT HNQRDF+FFR H RY+
Sbjct: 249 PLPEFEGRQAVTLHNQRDFLFFRRH--------------------------------RYV 276
Query: 315 FETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL------------- 361
F++ E G LQE GPRFTLKL L
Sbjct: 277 FKSTEKTG------------------------LQEIGPRFTLKLRWLKKGLPTAKESQAP 312
Query: 362 -----------QHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
Q G+ + G +++W+ KP+M+ +RR FFL
Sbjct: 313 PELHIADGAEEQIGSVEMAGETDYDWLWKPKMEVNRRTFFL 353
>gi|294874819|ref|XP_002767114.1| IMP4 U3 small nucleolar ribonucleoprotein, putative [Perkinsus
marinus ATCC 50983]
gi|239868542|gb|EEQ99831.1| IMP4 U3 small nucleolar ribonucleoprotein, putative [Perkinsus
marinus ATCC 50983]
Length = 421
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 193/396 (48%), Gaps = 103/396 (26%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I NK KR + + +KK KR+ K R A R GEE +T TIE RE D
Sbjct: 83 IPNKWKRQELVGRQYREKKKVKRETRKQRQEARAR----GEEVDVPVT-TTIEMMREADV 137
Query: 101 TVCRPD-DDELFAGNDADEF----------SSILKQGCA--------------------- 128
T+ P+ DDE+ A DEF S +L A
Sbjct: 138 TMLPPEGDDEVKADERMDEFRHTFPTPPPTSEVLPPPAAATVLSTPSTVATSVEGEEEEE 197
Query: 129 --------PKILITTCR-FNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDF 179
PKI++TT + S R I EL+ V+P Y+++ + + KI ++A + F
Sbjct: 198 EEERESVEPKIMLTTSMAYPSERSYGLIKELVEVVPGLQYFRKKHFPITKICDFANNRGF 257
Query: 180 TSIIVVHTNRR-EPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG---NPTGHIPELVLN 235
T+++V+ +R+ EP +L I LP+GPT++++L+ L L D+K HG NP PEL+LN
Sbjct: 258 TAVVVLSEDRKHEPSSLHITSLPEGPTSYWRLTSLELGADMK-HGATCNPDDR-PELLLN 315
Query: 236 NFATRLGHRVGRLIQSLFPQ-SPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTI 294
F TRLGHRVGR I SLF P+F+GRRVV FHNQRDF+FFRH+
Sbjct: 316 GFGTRLGHRVGRQIGSLFGAIQPDFKGRRVVAFHNQRDFVFFRHY--------------- 360
Query: 295 LCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 354
RY+F ES +D + + A LQE GPRF
Sbjct: 361 -----------------RYVFRDLES--TDKDDRCA----------------LQEIGPRF 385
Query: 355 TLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
TLKL SLQ G F + GE+E+V +P+ SR+ F L
Sbjct: 386 TLKLRSLQLGLFAKRTGEYEYVWRPDSQVSRKVFAL 421
>gi|294951305|ref|XP_002786920.1| Ribosome production factor, putative [Perkinsus marinus ATCC 50983]
gi|239901498|gb|EER18716.1| Ribosome production factor, putative [Perkinsus marinus ATCC 50983]
Length = 370
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 133/342 (38%), Positives = 179/342 (52%), Gaps = 65/342 (19%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I NK KR + + +KK KR+ K R A R GEE +T TIE RE D
Sbjct: 83 IPNKWKRQELVGRQYREKKKVKRETRKQRQEARAR----GEEVDVPVTT-TIEMMREADV 137
Query: 101 TVCRPD-DDELFAGNDADEFSSILKQGCAPKILITTCR-FNSNRGPAFISELLSVIPNSH 158
T+ P+ DDE+ A DEF PKI++TT + S R I EL+ V+P
Sbjct: 138 TMLPPEGDDEVKADERMDEFR-YFSDSVEPKIMLTTSMAYPSERSYGLIKELVEVVPGLQ 196
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR-EPDALLIIGLPDGPTAHFKLSKLVLRK 217
Y+++ + + KI ++A + FT+++V+ +R+ EP +L I LP+GPT++++L+ L L
Sbjct: 197 YFRKKHFPITKICDFANNRGFTAVVVLSEDRKHEPSSLHITSLPEGPTSYWRLTSLELGA 256
Query: 218 DIKNHG---NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQ-SPEFRGRRVVTFHNQRDF 273
D+K HG NP PEL+LN F TRLGHRVGR I SLF P+F+GRRVV FHNQRDF
Sbjct: 257 DMK-HGATCNPDDR-PELLLNGFGTRLGHRVGRQIGSLFGAIQPDFKGRRVVAFHNQRDF 314
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
+FFRH+ RY+F ES +D + + A
Sbjct: 315 VFFRHY--------------------------------RYVFRDLES--TDKDDRCA--- 337
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 375
LQE GPRFTLKL SLQ G F + GE E+
Sbjct: 338 -------------LQEIGPRFTLKLRSLQLGLFAKRNGEDEF 366
>gi|215259915|gb|ACJ64449.1| ribosome production factor 1 [Culex tarsalis]
Length = 226
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 110/279 (39%), Positives = 152/279 (54%), Gaps = 58/279 (20%)
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
+ DE + + PK+LIT +R F +EL ++PNS + R LKK+ + A
Sbjct: 3 EHDEINEYYSKSYEPKVLITYNATPHSRTRRFGAELERILPNSMVHSRNKATLKKVCQSA 62
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH-GNPTGHIPELV 233
+++FT ++V++ N ++P+ +L+I LPDGPTAHFK+S +D+K G T H PE++
Sbjct: 63 VREEFTDLVVINENNKQPEGMLVIHLPDGPTAHFKISNYKSLRDLKKRRGMITSHRPEVI 122
Query: 234 LNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWT 293
L NF TRLG +GR++ +LF PEF+GRRV TFHNQRD+IFFRHH
Sbjct: 123 LTNFTTRLGLTIGRMLGALFHYDPEFKGRRVATFHNQRDYIFFRHH-------------- 168
Query: 294 ILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPR 353
YE D NGK+ K L+E GPR
Sbjct: 169 --------------LYEF------------DKNGKRVK---------------LRELGPR 187
Query: 354 FTLKLVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 390
FTLKL SLQ G FD+K G++EW+ +K + SRRRFFL
Sbjct: 188 FTLKLRSLQTGLFDSKCGDYEWMITNKRHLMESRRRFFL 226
>gi|389593195|ref|XP_003721851.1| ribosome biogenesis protein [Leishmania major strain Friedlin]
gi|321438353|emb|CBZ12105.1| ribosome biogenesis protein [Leishmania major strain Friedlin]
Length = 330
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 157/313 (50%), Gaps = 57/313 (18%)
Query: 79 LGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDAD-EFSSILKQGCAPKILITTCR 137
L E+ P + TP+T E R D T+ +D ++AD EF++ + PK LITT
Sbjct: 74 LKEKAPVKATPKTKERKRRVDVTIIENKEDAEIINDEADDEFAAFFRDRKNPKTLITTGE 133
Query: 138 FNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLI 197
R + ELL ++PNS Y R +Y LK+I + ++FT ++VV +EP L++
Sbjct: 134 HPCFRTKQLVKELLWLVPNSIYRPRKSYTLKEITLFCCNREFTDLLVVTDRIKEPYNLIV 193
Query: 198 IGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSP 257
LP+GPTA F++S + +++ T H PEL+ NF TRLG R+ R+++ LFP +
Sbjct: 194 SHLPEGPTATFRVSNFLSHAQLEDPAPRTEHYPELIFKNFDTRLGRRISRMLECLFPATR 253
Query: 258 EFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFET 317
++ GR V TFHNQRD+IF R H RYIF+
Sbjct: 254 DYAGRAVATFHNQRDYIFLRTH--------------------------------RYIFDG 281
Query: 318 KESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH 377
E+ RLQE GPRFTL+L+SLQ GTFD + GE+EW
Sbjct: 282 LEA------------------------VRLQEMGPRFTLRLLSLQSGTFDRQFGEYEWYR 317
Query: 378 KPEMDTSRRRFFL 390
K E D +++
Sbjct: 318 KKEHDADTLEWYM 330
>gi|58392102|ref|XP_319105.2| AGAP009968-PA [Anopheles gambiae str. PEST]
gi|55236189|gb|EAA14330.2| AGAP009968-PA [Anopheles gambiae str. PEST]
Length = 237
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 157/291 (53%), Gaps = 64/291 (21%)
Query: 106 DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPA---FISELLSVIPNSHYYKR 162
D E+ DEF ++ P+++IT FN+ F S L +IPN+ ++R
Sbjct: 5 DQAEVMNDLANDEFCEYYQKSYEPRVMIT---FNATPHMVTRKFASLLRRMIPNAKTFRR 61
Query: 163 GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK-N 221
LK++ + A ++++T I+VV+ NR++P+ LL+I LPDGPTAHFK+S KD+K N
Sbjct: 62 NKTQLKRVCKSAIRENYTDILVVNENRKKPEGLLLIHLPDGPTAHFKVSNFKDLKDLKRN 121
Query: 222 HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRC 281
+ T H PE++LNNF TRLG +GR++ +LF PEFRGRR VTFHNQRD+IFFRHH
Sbjct: 122 ERDITTHRPEVILNNFTTRLGLTIGRMLGALFHYEPEFRGRRAVTFHNQRDYIFFRHH-- 179
Query: 282 VPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQ 341
YE D NGK+ K
Sbjct: 180 --------------------------LYEF------------DKNGKRVK---------- 191
Query: 342 KVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 390
L+E GPRFTLKL SLQ G FD K G++EW+ +K SRRRFFL
Sbjct: 192 -----LRELGPRFTLKLRSLQVGLFDGKCGDYEWMITNKRHQMESRRRFFL 237
>gi|146090694|ref|XP_001466314.1| putative RNA processing factor 1 [Leishmania infantum JPCM5]
gi|134070676|emb|CAM69026.1| putative RNA processing factor 1 [Leishmania infantum JPCM5]
Length = 330
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 157/313 (50%), Gaps = 57/313 (18%)
Query: 79 LGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDAD-EFSSILKQGCAPKILITTCR 137
L ++ P + TP+T E R D T+ +D ++AD EF++ + PK LITT
Sbjct: 74 LKDKAPVKATPKTKERKRRADVTIVENKEDAEIINDEADDEFAAFFRDRKNPKTLITTGE 133
Query: 138 FNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLI 197
R + ELL ++PNS Y R +Y LK+I + ++FT ++VV +EP L++
Sbjct: 134 HPCFRTKQLVKELLWLVPNSIYRPRKSYTLKEITLFCCNREFTDLLVVTDRIKEPYNLIV 193
Query: 198 IGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSP 257
LP+GPTA F++S + +++ T H PEL+ NF TRLG R+ R+++ LFP +
Sbjct: 194 SHLPEGPTATFRVSNFLSYTQLEDPAPRTEHYPELIFKNFDTRLGRRISRMLECLFPATR 253
Query: 258 EFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFET 317
++ GR V TFHNQRD+IF R H RYIF+
Sbjct: 254 DYAGRAVATFHNQRDYIFLRTH--------------------------------RYIFDG 281
Query: 318 KESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH 377
E+ RLQE GPRFTL+L+SLQ GTFD + GE+EW
Sbjct: 282 LEA------------------------VRLQEMGPRFTLRLLSLQSGTFDRQFGEYEWYR 317
Query: 378 KPEMDTSRRRFFL 390
K E D +++
Sbjct: 318 KKEHDADTLEWYM 330
>gi|398017432|ref|XP_003861903.1| RNA processing factor 1, putative [Leishmania donovani]
gi|322500131|emb|CBZ35206.1| RNA processing factor 1, putative [Leishmania donovani]
Length = 330
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 157/313 (50%), Gaps = 57/313 (18%)
Query: 79 LGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDAD-EFSSILKQGCAPKILITTCR 137
L ++ P + TP+T E R D T+ +D ++AD EF++ + PK LITT
Sbjct: 74 LKDKAPVKATPKTKERKRRADVTIIENKEDAEIINDEADDEFAAFFRDRKNPKTLITTGE 133
Query: 138 FNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLI 197
R + ELL ++PNS Y R +Y LK+I + ++FT ++VV +EP L++
Sbjct: 134 HPCFRTKQLVKELLWLVPNSIYRPRKSYTLKEITLFCCNREFTDLLVVTDRIKEPYNLIV 193
Query: 198 IGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSP 257
LP+GPTA F++S + +++ T H PEL+ NF TRLG R+ R+++ LFP +
Sbjct: 194 SHLPEGPTATFRVSNFLSYTQLEDPAPRTEHYPELIFKNFDTRLGRRISRMLECLFPATR 253
Query: 258 EFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFET 317
++ GR V TFHNQRD+IF R H RYIF+
Sbjct: 254 DYAGRAVATFHNQRDYIFLRTH--------------------------------RYIFDG 281
Query: 318 KESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH 377
E+ RLQE GPRFTL+L+SLQ GTFD + GE+EW
Sbjct: 282 LEA------------------------VRLQEMGPRFTLRLLSLQSGTFDRQFGEYEWYR 317
Query: 378 KPEMDTSRRRFFL 390
K E D +++
Sbjct: 318 KKEHDADTLEWYM 330
>gi|170086756|ref|XP_001874601.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649801|gb|EDR14042.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 358
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 140/414 (33%), Positives = 188/414 (45%), Gaps = 124/414 (29%)
Query: 38 PSMIKNKEKRSAVH---AKLKHQKKVEKR---KKLKARD-AAEKRALELGEEPPARMTPR 90
PS IKNK KR + K K+Q K++KR K +A D AA+K+ L A PR
Sbjct: 8 PSSIKNKIKREEISRKSKKAKNQHKLQKRLAQAKEEANDPAAKKKRL-------AENVPR 60
Query: 91 TIENTREPDETVCRPD-----------DDELFAGNDADEFSSILKQ----GCAPKILITT 135
T++NTRE D ++ D +E+ A AD F+S PKILITT
Sbjct: 61 TLDNTREFDPSILTADPSSSAGGSFSGQEEVAADLAADPFASYFTSEDDPSIPPKILITT 120
Query: 136 CRFNSNRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVVHTNRREP 192
S F EL+ V P + + +R ++L +I +A + + + VV+ + ++P
Sbjct: 121 SPKASTSTYDFCDELVGVFPGAEFIRRKKGKGFELGRIAGWAADRGYKHLCVVNEDMKKP 180
Query: 193 DALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSL 252
+A+ ++ LP+GPTA+FKL+ + L K I H T H PELVLN F TRLGH VGRL Q+
Sbjct: 181 NAITLVHLPNGPTAYFKLTSVELTKQIYGHARATSHHPELVLNGFVTRLGHAVGRLFQTT 240
Query: 253 FPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECR 312
FP PEF+GR++VT HNQRDF+FFR H R
Sbjct: 241 FPPLPEFQGRQIVTLHNQRDFLFFRRH--------------------------------R 268
Query: 313 YIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL----------- 361
Y F + E LQE GPRFTLKL L
Sbjct: 269 YAFRSPEK------------------------VALQEIGPRFTLKLRWLKKNIPAVQNFG 304
Query: 362 ---QHGTFDT----------------------KGGEFEWVHKPEMDTSRRRFFL 390
Q FD+ K E+ W KPE++T+RR FFL
Sbjct: 305 EQPQPLAFDSEPTETQSKEAASEQIPKKVVPPKQDEYIWTWKPELETTRRTFFL 358
>gi|428671937|gb|EKX72852.1| RNA processing factor [Babesia equi]
Length = 307
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 105/258 (40%), Positives = 146/258 (56%), Gaps = 17/258 (6%)
Query: 39 SMIKNKEKR-------------SAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPA 85
S IKNK KR + + K + ++K K K+++ R E A+ L E
Sbjct: 18 SAIKNKNKRERRKLRGLEPPPSAKLQRKAEERQKHRKEKRIERRKRKEDEAMGLEVE--- 74
Query: 86 RMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPA 145
R P TIE+ R DET+ D E+ A DEFS PK++IT+ R S +
Sbjct: 75 RRVPETIESMRRFDETIVNDGDPEIDAEEAIDEFSGHFNGDSTPKLMITSSRRPSEKMRT 134
Query: 146 FISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN-RREPDALLIIGLPDGP 204
F+ ELL ++PNS YY R + LK +++ + F++I++V+ + P L + LP GP
Sbjct: 135 FMKELLLILPNSIYYARDEHKLKALVKAGTEGGFSAILLVNQGPDKMPSGLYLCSLPSGP 194
Query: 205 TAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 264
T FKL+ + ++K G T PELVLN+F TRLG R+GR + +LFP +PEF GRRV
Sbjct: 195 TTFFKLTSITFASEMKGGGVLTPTTPELVLNSFNTRLGRRIGRQLGALFPLTPEFEGRRV 254
Query: 265 VTFHNQRDFIFFRHHRCV 282
+TFHNQRD IFFRHHR V
Sbjct: 255 ITFHNQRDMIFFRHHRYV 272
>gi|393223052|gb|EJD08536.1| Brix-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 397
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 172/356 (48%), Gaps = 85/356 (23%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTRE 97
PS IKNK KR V K K K+ EK ++ AR E ++ A PRT++NTRE
Sbjct: 8 PSSIKNKLKREEVARKAKKGKRQEKLQRRLARAKVEANDPLAKKKRLAENVPRTLDNTRE 67
Query: 98 PDETV------CRPDD--------------DELFAGNDADEFSSILKQG------CAPKI 131
D ++ +PD DE +D F+S APK+
Sbjct: 68 FDPSILTAAPSSQPDPPLEQTASDSGQQPADESALDISSDPFASYFASAFDSDPSVAPKV 127
Query: 132 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVVHTN 188
LITT +S F EL++V+P + + +R +++ I +A + +++++VV+ +
Sbjct: 128 LITTSFKSSKLTYDFCDELVNVVPGAEFIRRKKGKGFEIGNIAAWAAGRGYSNMVVVNED 187
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
++P+A+ +I LP+GP+++F+LS + L K I H T H PELVLNNF TRLGH VGR+
Sbjct: 188 MKKPNAITLIHLPEGPSSYFRLSSIQLTKQISGHARSTDHFPELVLNNFVTRLGHTVGRM 247
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCY 308
Q+LFP PEF+GR+VVT HNQRDF+FFR H
Sbjct: 248 FQTLFPPMPEFQGRQVVTLHNQRDFLFFRRH----------------------------- 278
Query: 309 YECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 364
RY F + E LQE GPRFTLKL ++ G
Sbjct: 279 ---RYAFRSTEKAA------------------------LQEIGPRFTLKLRWMKKG 307
>gi|145479943|ref|XP_001425994.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393066|emb|CAK58596.1| unnamed protein product [Paramecium tetraurelia]
Length = 338
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 150/247 (60%), Gaps = 12/247 (4%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNKEKR + + ++++K K+ + K ++A R ++ P TI++ RE
Sbjct: 49 SRIKNKEKRVQILERKQNEQKKTKKMERKEKEANPDRE---------KLGPLTIDDKREL 99
Query: 99 DETVCRPDDDELFAGNDA--DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI-P 155
DE +DD+ N+ DEF + ++G PKI+ITT S + F+ ++ V P
Sbjct: 100 DENFVFDEDDQEELQNEELIDEFQNYFQEGQDPKIIITTSERPSRQLFDFLKDVKDVFGP 159
Query: 156 NSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVL 215
+HY+ R + +K+I EY+ K +T ++V +R+E L+ + LP GPT FKL+
Sbjct: 160 ETHYWPRKQFSIKEIQEYSINKGYTELLVFREHRKEVSQLIYVHLPAGPTYKFKLTNYTP 219
Query: 216 RKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 275
+I +HG T H PEL+LN+F T++G RVGR + +LFP P+FRGRRVVTFHNQRDFIF
Sbjct: 220 CDEIHHHGRFTDHNPELILNHFNTKVGRRVGRGLAALFPSKPQFRGRRVVTFHNQRDFIF 279
Query: 276 FRHHRCV 282
FRHHR +
Sbjct: 280 FRHHRYM 286
>gi|399218339|emb|CCF75226.1| unnamed protein product [Babesia microti strain RI]
Length = 344
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 162/346 (46%), Gaps = 97/346 (28%)
Query: 76 ALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDA-------------DEFSSI 122
A++ G EP TP+TIE+ R E ++GN DEF
Sbjct: 65 AIKAGLEPEPIQTPKTIESMRRV----------ETWSGNHTFNLVDTEGVACMIDEFQEY 114
Query: 123 LKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSI 182
PKILIT+ R S + FI ELL +IPNS Y R + LK ++++A + FT+I
Sbjct: 115 YNGNVTPKILITSNRRPSYKLRTFIKELLLIIPNSIYLARSEFLLKNVVKHALNESFTAI 174
Query: 183 IVVHTNR-REPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 241
I+V+ R + P + I LPDGPT ++L+ L L ++ + H PE+VL+NF T L
Sbjct: 175 IMVNQGRDKLPHSFHIATLPDGPTVFYRLTSLKLASEMVGAAYSSTHYPEIVLDNFTTVL 234
Query: 242 GHRVGRLIQSLFP-----------------QSPEFRGRRVVTFHNQRDFIFFRHHRCVPL 284
G R+GR + SLFP Q+P+F GRRV+TF NQRDFIFFRHH
Sbjct: 235 GQRLGRQLGSLFPPKSNPVMGLISNVIMLTQNPDFEGRRVITFRNQRDFIFFRHH----- 289
Query: 285 EFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVI 344
RY+F + E
Sbjct: 290 ---------------------------RYVFRSMEK------------------------ 298
Query: 345 TRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L E GPRFTLK+ S+Q G FD G +E++ KP++ R+RFFL
Sbjct: 299 CSLVEIGPRFTLKIRSVQEGAFDLVHGLYEFLWKPDLQVDRKRFFL 344
>gi|390596642|gb|EIN06043.1| Brix-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 402
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 127/367 (34%), Positives = 171/367 (46%), Gaps = 101/367 (27%)
Query: 37 LPSMIKNKEKRSAVHAKLKHQKKVEK------RKKLKARDAAEKRALELGEEPPARMTPR 90
+PS IKNK KR V K K K+ +K R K++A+D A KR L E PR
Sbjct: 7 MPSSIKNKIKREEVARKAKRTKRQDKLQKRLERAKIEAKDPAVKRK-RLEEN-----VPR 60
Query: 91 TIENTRE-----------------PDETVCRPDDDELFAG-----NDAD----EFSSILK 124
T++NTRE PD D G NDAD F+S
Sbjct: 61 TLDNTREYDPSFLTANPASSSSAQPDAGPSNTQQDGALEGTHIPENDADFANDPFASYFT 120
Query: 125 QGCA---PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG----TYDLKKIIEYAKKK 177
PK+L+TT + F EL ++ P S + +R +++ +I +A +
Sbjct: 121 AADPTKPPKVLVTTSPRATRASYEFCEELCAIFPGSEFVRRNKKSRGFEMGRIAGWAAGR 180
Query: 178 DFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNF 237
+ +++VV+ + ++P+A+ I+ LP+GPTA+FKL+ + L K I H T H PELVLN F
Sbjct: 181 GYGALMVVNEDMKKPNAITIVHLPEGPTAYFKLTSIQLSKQIHGHARATAHYPELVLNGF 240
Query: 238 ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCS 297
TRLGH VGR+ Q+LFP PEF+GR+VVT HNQRDF+FFR H
Sbjct: 241 VTRLGHAVGRMFQTLFPPLPEFQGRQVVTLHNQRDFLFFRRH------------------ 282
Query: 298 YLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 357
RY F + E LQE GPRFTLK
Sbjct: 283 --------------RYAFRSTEK------------------------VALQEIGPRFTLK 304
Query: 358 LVSLQHG 364
L SL+ G
Sbjct: 305 LRSLRKG 311
>gi|253743432|gb|EES99826.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Giardia intestinalis ATCC 50581]
Length = 365
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/361 (35%), Positives = 177/361 (49%), Gaps = 56/361 (15%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTRE 97
PS I+N+ KR + +++ QK KR+ K RD E R G+E R T+++ R+
Sbjct: 53 PSRIRNRLKRLRIVQEVRDQKLRVKRELHKRRDEEEARLRAEGKEVSLRKPRLTLDSKRD 112
Query: 98 PDETVCRPDDD----ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGP-AFISELLS 152
D T+ + EL DEF K+ ITT +N+ FI + +
Sbjct: 113 EDATMTAHAKEVVAEELVHAETLDEFGKYFDGTRTVKVAITTSIGCTNKKTLQFIDDFIK 172
Query: 153 VIPNS-HYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLS 211
V+ Y R ++++ + FTS+IVVH +R ++++ LP GPTA F+++
Sbjct: 173 VLGGVITYIPREELQIRQLAVRLIDEGFTSVIVVHEDRDVITHMMMMALPMGPTAWFRMT 232
Query: 212 KLVLRKDIKNHGNPTGHIP-ELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQ 270
+ KD+ G P P E+++NNF TRLG RVGR+IQS+ + R R+V+TFHNQ
Sbjct: 233 NVYTHKDLVGSGVPIPDCPPEVIMNNFKTRLGRRVGRMIQSMLSREEHLRARQVITFHNQ 292
Query: 271 RDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKA 330
RDFIFFR +R YIFE K+ K
Sbjct: 293 RDFIFFRAYR--------------------------------YIFENKDKK--------- 311
Query: 331 KDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDT-SRRRFF 389
D SE VI R+ E GP+FTLKL LQ G FD E+EW +KPEMD SR RFF
Sbjct: 312 -DPTSE------VIVRMHELGPQFTLKLKWLQKGLFDPHNEEYEWFYKPEMDNHSRTRFF 364
Query: 390 L 390
L
Sbjct: 365 L 365
>gi|426196668|gb|EKV46596.1| hypothetical protein AGABI2DRAFT_222942 [Agaricus bisporus var.
bisporus H97]
Length = 375
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 189/380 (49%), Gaps = 39/380 (10%)
Query: 38 PSMIKNKEKRSAVH---AKLKHQKKVEKR---KKLKARDAAEKRALELGEEPPARMTPRT 91
PS IKNK KR V K + Q K++KR KL+A D A+K+ L E P+T
Sbjct: 8 PSSIKNKIKRQDVFRKGKKARTQAKLQKRLAQAKLEANDPAQKKK-RLTEH-----VPKT 61
Query: 92 IENTREPDETVCRPDD------DELFAGNDADEFSSILKQG---CAPKILITTCRFNSNR 142
++NTRE D ++ D DE+ A D F+S PKILITT S
Sbjct: 62 LDNTREFDPSIINHDSNEDSTQDEIAADIATDPFASYFTTDDPTTPPKILITTSPKASKA 121
Query: 143 GPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIG 199
F EL+ V P + + +R +++ I + + + + VV+ + ++P+A+ ++
Sbjct: 122 TYNFCDELVGVFPGAEFIRRKKGKGFEIGWIAAWTANRGYKHLCVVNEDHKKPNAITLVY 181
Query: 200 LPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEF 259
LP GPTA+FKL+ + L K I H T H PEL+LN F TRLGH +GR+ Q+ FP PEF
Sbjct: 182 LPHGPTAYFKLTSVELTKQIYGHARATAHNPELILNGFTTRLGHGIGRMFQTTFPPVPEF 241
Query: 260 RGRRVVTFHNQRDFIFFRHHRC-------VPLEFISCYMWTILCSYLTSIMKAFCYYECR 312
+GR+VVT HNQRDF+FFR HR V L+ I +T+ +L + A +
Sbjct: 242 QGRQVVTLHNQRDFLFFRRHRYAFRSTEKVALQEIGP-RFTLKLRWLKKNVPA-----VQ 295
Query: 313 YIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG--TFDTKG 370
E + D + + + + QQ V T E +L K
Sbjct: 296 NFGEDPKPLTFDTDDDPFEQSDEVQPEQQNVQTADMEEEEGEGESSAALPQSLNIVPPKQ 355
Query: 371 GEFEWVHKPEMDTSRRRFFL 390
E+ W KPE++T+RR FFL
Sbjct: 356 DEYIWQWKPELETTRRTFFL 375
>gi|409081430|gb|EKM81789.1| hypothetical protein AGABI1DRAFT_118863 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 375
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/383 (34%), Positives = 190/383 (49%), Gaps = 45/383 (11%)
Query: 38 PSMIKNKEKRSAVH---AKLKHQKKVEKR---KKLKARDAAEKRALELGEEPPARMT--- 88
PS IKNK KR V K + Q K++KR KL+A D A+K+ R+T
Sbjct: 8 PSSIKNKIKRQDVFRKGKKARTQAKLQKRLAQAKLEANDPAQKKK---------RLTEHI 58
Query: 89 PRTIENTREPDETVCRPDD------DELFAGNDADEFSSILKQG---CAPKILITTCRFN 139
P+T++NTRE D ++ D DE+ A D F+S PKILITT
Sbjct: 59 PKTLDNTREFDPSIINHDSNEDSTQDEIAADIATDPFASYFTTDDPTTPPKILITTSPKA 118
Query: 140 SNRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVVHTNRREPDALL 196
S F EL+ V P + + +R +++ I + + + + VV+ + ++P+A+
Sbjct: 119 SKATYNFCDELVGVFPGAEFIRRKKGKGFEIGWIAAWTANRGYKHLCVVNEDHKKPNAIT 178
Query: 197 IIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQS 256
++ LP GPTA+FKL+ + L K I H T H PEL+LN F TRLGH +GR+ Q+ FP
Sbjct: 179 LVYLPHGPTAYFKLTSVELTKQIYGHARATAHNPELILNGFTTRLGHGIGRMFQTTFPPV 238
Query: 257 PEFRGRRVVTFHNQRDFIFFRHHRC-------VPLEFISCYMWTILCSYLTSIMKAFCYY 309
PEF+GR+VVT HNQRDF+FFR HR V L+ I +T+ +L + A
Sbjct: 239 PEFQGRQVVTLHNQRDFLFFRRHRYAFRSTEKVALQEIGP-RFTLKLRWLKKNVPA---- 293
Query: 310 ECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG--TFD 367
+ E + D + + + + QQ V T E +L
Sbjct: 294 -VQNFGEDPKPLTFDTDDDPFEQSDEVQPEQQNVQTADMEEEEGEGESSAALPQSLNIVP 352
Query: 368 TKGGEFEWVHKPEMDTSRRRFFL 390
K E+ W KPE++T+RR FFL
Sbjct: 353 PKQDEYIWQWKPELETTRRTFFL 375
>gi|339244457|ref|XP_003378154.1| ribosome production factor 1 [Trichinella spiralis]
gi|316972956|gb|EFV56601.1| ribosome production factor 1 [Trichinella spiralis]
Length = 309
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 134/233 (57%), Gaps = 24/233 (10%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
IK+KEKR K+V +R+KL+A GE+ P+T+ENTRE DE
Sbjct: 47 IKSKEKR----------KRVAERRKLRA---------TFGEDICPVQQPKTLENTREYDE 87
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
T+ P+D+E + DE + PK+L+TT E IPNSH
Sbjct: 88 TIVLPNDEEEVYEENTDEIAPYFHMKTKPKVLLTTSPKAKVVSWKLCYEFHRCIPNSHVI 147
Query: 161 KRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 220
R LK++I A K++T I+VVH +RR P+ L++ LPDGPTA+FK+ + L KDIK
Sbjct: 148 GRKGISLKRLISLANSKNYTDIVVVHEDRRSPNGLVLCHLPDGPTAYFKMQNVKLPKDIK 207
Query: 221 NHGNPTGHI---PELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQ 270
N G G + PELVLNNF+TRLGH V R++ LFPQ P F GRRVVTFHNQ
Sbjct: 208 NCGK--GAVFGNPELVLNNFSTRLGHTVARMLACLFPQDPHFGGRRVVTFHNQ 258
>gi|302686930|ref|XP_003033145.1| hypothetical protein SCHCODRAFT_53993 [Schizophyllum commune H4-8]
gi|300106839|gb|EFI98242.1| hypothetical protein SCHCODRAFT_53993 [Schizophyllum commune H4-8]
Length = 359
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 133/414 (32%), Positives = 175/414 (42%), Gaps = 111/414 (26%)
Query: 32 MKKEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRT 91
+ K PS I NK KR V AK + K +K KK R E + L ++ + P+T
Sbjct: 2 VSKRFEPSQIGNKAKREDVAAKQRKAKTQQKLKKRLERAKVESQNPALKKQRLQQNVPKT 61
Query: 92 IENTREPD--------ETVCRPDDDELFAGNDADEFSSILKQG---CAPKILITTCRFNS 140
++N RE D T D E A D F+S PKILITT
Sbjct: 62 LDNQREFDPSFLTADPSTSTSEDRQETDADIANDPFASFFSDADPDVPPKILITTGPQAH 121
Query: 141 NRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLI 197
F EL V P + + +R +++ +I +A + + ++VV+ + R+P+A+ +
Sbjct: 122 KPTYEFCDELAGVFPGAEFIRRKKGKGFEMGRIAGWAADRGYKHMLVVNEDHRQPNAITL 181
Query: 198 IGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSP 257
I LP GPTA+FKLS + L K I H T H PELVLN F TRLG VGR+ Q+ FP P
Sbjct: 182 IHLPAGPTAYFKLSSIQLTKQIYGHARATAHHPELVLNGFVTRLGLSVGRMFQTCFPPLP 241
Query: 258 EFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFET 317
EF+GR+VVT HNQRDF+FFR H RY F +
Sbjct: 242 EFQGRQVVTLHNQRDFLFFRRH--------------------------------RYAFRS 269
Query: 318 KESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG------------- 364
E LQE GPRFTLKL L+ G
Sbjct: 270 TEK------------------------VALQEIGPRFTLKLRWLKKGIPAVQQFGAPPKP 305
Query: 365 ----------------------------TFDTKGGEFEWVHKPEMDTSRRRFFL 390
T E+ WV KPE++T+RR FFL
Sbjct: 306 LEFDAAEPSEEAMETDEPTPDTSKPPQKTVPPTQDEYVWVWKPELETTRRTFFL 359
>gi|392589923|gb|EIW79253.1| Brix-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 387
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 197/390 (50%), Gaps = 47/390 (12%)
Query: 38 PSMIKNKEKRSAV-------HAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPR 90
PS IKNK KR V + K QK++E+ K AA+KR L PR
Sbjct: 8 PSQIKNKIKREEVTNKQKKAKNQQKLQKRLEQAKLESTNPAAKKRRL-------LENVPR 60
Query: 91 TIENTREPDETVCRPDDDEL---FAGNDA-DEFSSI-----LKQGCAPKILITTCRFNSN 141
T++NTRE D + D L F+ + A D F+ + PK+LITT S
Sbjct: 61 TLDNTREHDPSTVVSTDGPLSHEFSSDIASDPFAEYFTFTDVDPTVPPKVLITTSPKVSK 120
Query: 142 RGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLII 198
F EL+ + P + Y +R +++ +I +A + + ++VV+ + ++P+A+ +I
Sbjct: 121 GTHEFCDELVGIFPGAEYIRRKKGKGFEVGRIAGWAAGRGYKHMVVVNEDMKKPNAITLI 180
Query: 199 GLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPE 258
LP+GP A+FKL+ + L K I H T H PELVLNNF+T LGH VGR+ Q+LFP PE
Sbjct: 181 YLPNGPMAYFKLTSVELTKQIYGHARATPHNPELVLNNFSTSLGHAVGRMFQTLFPPLPE 240
Query: 259 FRGRRVVTFHNQRDFIFFRHHRC-------VPLEFISCYMWTILCSYLTSIMKA---FCY 308
F+GR+VVT HNQRDF+FFR HR V L+ I +T+ +L + + A F
Sbjct: 241 FQGRQVVTLHNQRDFLFFRRHRYAFRSTEKVALQEIGP-RFTLKLRWLKNGLPAVMNFGA 299
Query: 309 YECRYIFETKESKGSDANG------KKAKDAKSEKT--SQQKVITRLQECGPRFTLKLVS 360
+T + D ++A+D EK +Q + +E P + S
Sbjct: 300 SPASLQIDTAPATDEDEQAEHVNEDEQAEDKDEEKPEDAQNDEVDEAEEHTPHESTAQPS 359
Query: 361 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
K ++ W+ KPE++T+RR FFL
Sbjct: 360 --QPIQPPKENDYLWMWKPELETTRRTFFL 387
>gi|159113037|ref|XP_001706746.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Giardia lamblia ATCC 50803]
gi|157434845|gb|EDO79072.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Giardia lamblia ATCC 50803]
Length = 366
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/362 (34%), Positives = 179/362 (49%), Gaps = 57/362 (15%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPR-TIENTR 96
PS I+N+ KR + +++ QK KR+ + RD E + G++ + PR T+++ R
Sbjct: 53 PSRIRNRLKRLRIVQEVRDQKLRVKRELHRRRDEQEAQLRAEGKDITSLRKPRLTLDSKR 112
Query: 97 EPDETVCRPDDD----ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGP-AFISELL 151
+ D T+ + EL DEF K+ ITT N+G FI + +
Sbjct: 113 DEDATMTAHAKEVVAEELVHAETLDEFGEYFDGTRIVKVAITTSVGCKNKGTLQFIDDFI 172
Query: 152 SVIPNS-HYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKL 210
V+ Y R ++++ + FTS+I+VH +R ++++ LP GPTA F++
Sbjct: 173 KVLGGVISYIPREELQIRQLAVRLIDEGFTSVIIVHEDRDIITHMMMMALPAGPTAWFRM 232
Query: 211 SKLVLRKDIKNHGNPTGHIP-ELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHN 269
+ + K++ G P P E+++NNF TRLG RVGR+IQS+ + R R+V+TFHN
Sbjct: 233 TNVYTHKELVGSGVPIPDCPPEVIMNNFKTRLGRRVGRMIQSMLSREEHLRARQVITFHN 292
Query: 270 QRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKK 329
QRDFIFFR +R YIFE K+ K
Sbjct: 293 QRDFIFFRAYR--------------------------------YIFENKDKK-------- 312
Query: 330 AKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMD-TSRRRF 388
D SE VI R+ E GP+FTLKL LQ G FD E+EW +KPEMD SR RF
Sbjct: 313 --DPTSE------VIVRMHELGPQFTLKLKWLQKGLFDPHNEEYEWFYKPEMDHHSRTRF 364
Query: 389 FL 390
FL
Sbjct: 365 FL 366
>gi|313217833|emb|CBY41243.1| unnamed protein product [Oikopleura dioica]
Length = 174
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 131/230 (56%), Gaps = 63/230 (27%)
Query: 168 KKIIEYAKKKDFTSIIVVHTNRRE-PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT 226
KKII A KK FT++IVV +R+ P+ L II LP GPTAHFK+S + LR+ K PT
Sbjct: 1 KKIIPQAIKKGFTAMIVVSADRKWVPNDLKIIYLPGGPTAHFKMSSVRLREKTKGGDTPT 60
Query: 227 GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEF 286
H+PEL+LNNF +RLG R+GR+ +LFPQ PEF GR+VVTFHNQRD+IFFR H
Sbjct: 61 THLPELILNNFKSRLGRRIGRMFAALFPQVPEFEGRQVVTFHNQRDYIFFRQH------- 113
Query: 287 ISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITR 346
RYIF +++ G
Sbjct: 114 -------------------------RYIFRSEKRAG------------------------ 124
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVH-KPEMDT-----SRRRFFL 390
L+E GPRFTLKL SLQ GTFD+K GEFE+ H + EMDT S+++FFL
Sbjct: 125 LKELGPRFTLKLRSLQKGTFDSKYGEFEYEHRRKEMDTEGHGYSKKKFFL 174
>gi|308159992|gb|EFO62505.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Giardia lamblia P15]
Length = 366
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 180/362 (49%), Gaps = 57/362 (15%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPR-TIENTR 96
PS I+N+ KR + +++ QK KR+ + RD E + G++ + PR T+++ R
Sbjct: 53 PSRIRNRLKRLRIVQEVRDQKLRVKRELHRRRDEQEAQLRAEGKDVTSLRKPRLTLDSKR 112
Query: 97 EPDETVCRPDDD----ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGP-AFISELL 151
+ D T+ + EL DEF K+ ITT +N+G FI + +
Sbjct: 113 DEDATLTAHAKEIVAEELVHAETLDEFGEYFDGTRIVKVAITTSIGCTNKGTLQFIDDFI 172
Query: 152 SVIPNS-HYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKL 210
V+ Y R ++++ + FTS+I+VH +R ++++ LP GPTA F++
Sbjct: 173 KVLGGVISYIPREELQIRQLAVRLIDEGFTSVIIVHEDRDIITHMMMMALPMGPTAWFRM 232
Query: 211 SKLVLRKDIKNHGNPTGHIP-ELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHN 269
+ + K++ G P P E+++NNF TRLG RVGR+IQS+ + R R+V+TFHN
Sbjct: 233 TNVYTHKELVGSGVPIPDCPPEVIMNNFKTRLGRRVGRMIQSMLSREEHLRARQVITFHN 292
Query: 270 QRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKK 329
QRDFIFFR +R YIFE K+ K
Sbjct: 293 QRDFIFFRAYR--------------------------------YIFENKDKK-------- 312
Query: 330 AKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMD-TSRRRF 388
D SE VI R+ E GP+FTLKL LQ G FD E+EW ++PEMD SR RF
Sbjct: 313 --DPTSE------VIVRMHELGPQFTLKLKWLQKGLFDPHNEEYEWFYRPEMDHHSRTRF 364
Query: 389 FL 390
FL
Sbjct: 365 FL 366
>gi|392565502|gb|EIW58679.1| Brix-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 396
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 194/397 (48%), Gaps = 52/397 (13%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTRE 97
PS IKNK KR + K K K EK ++ A+ AE ++ A+ PRT++NTRE
Sbjct: 8 PSTIKNKIKREEIANKQKKAKGQEKLQRRLAQAKAEANDPLAKKKRLAQNVPRTLDNTRE 67
Query: 98 PDETVCRPD-----------------------------DDELFA--GND--ADEFSSILK 124
D ++ + +DE A ND A FS +
Sbjct: 68 YDPSILTANPNSEAGPSTLTSQDPSSSSDAQAEPTQQPEDETAADIANDPFAAYFSGAID 127
Query: 125 QGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTS 181
PK+L+TT + F EL+ V P + + +R +++ +I +A + ++
Sbjct: 128 PSVPPKVLVTTSPKATRTTSDFCDELVGVFPGAEFIRRKKGKGFEVGRIAGWAANRGYSH 187
Query: 182 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 241
++VV+ + ++ +A+ ++ LP+GPTA+FKLS + L + I H T H PELVLN F TRL
Sbjct: 188 LMVVNEDTKKLNAITMVYLPNGPTAYFKLSSVELSQKISGHARATSHYPELVLNGFVTRL 247
Query: 242 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRC-------VPLEFISCYMWTI 294
GH VGRL Q+ FP PEF+GR+VVT HNQRDF+FFR HR V L+ I +T+
Sbjct: 248 GHTVGRLFQTFFPPMPEFQGRQVVTLHNQRDFLFFRRHRYAFRSTEKVALQEIGP-RFTL 306
Query: 295 LCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAK-SEKTSQQKVITRLQECGPR 353
Y+ + A +++ + KD + E +Q++ +E P
Sbjct: 307 KLRYMKKGLPAVKNLGAPSKHLEFDAEEHEQEKLALKDIEMGESAAQEQDEAGEKEPEPP 366
Query: 354 FTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
K+V E+ W+ KPE++T+RR FFL
Sbjct: 367 KQKKVVPPTE-------DEYLWIWKPELETTRRTFFL 396
>gi|365760351|gb|EHN02078.1| Rpf1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 241
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 140/243 (57%), Gaps = 17/243 (6%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I NK KR + A +KH K E+ + R E+ EL E+ +TIENTR DE
Sbjct: 9 ITNKLKRQEIFADIKHDKNKERHTMRRKRAKEERDNPELREQRLKENVTQTIENTRVYDE 68
Query: 101 TVCRP---DDDEL---FAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
T+ + D+D+L F GN + PKI +TT F + ++ V+
Sbjct: 69 TINKEVEGDEDDLMKYFNGNSNE----------PPKIFLTTNVNAKKSAYEFANIMIEVL 118
Query: 155 PNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKL 213
PN + KR Y LK+I + K++FT I++++ ++++ L I LP+GPT +FKLS
Sbjct: 119 PNVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSF 178
Query: 214 VLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
V K I HG PT HIPEL+LNNF TRLG VGRL QS+ PQ+P+ GR+V+T HNQRD+
Sbjct: 179 VEVKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDY 238
Query: 274 IFF 276
IFF
Sbjct: 239 IFF 241
>gi|389745478|gb|EIM86659.1| Brix-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 429
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 169/373 (45%), Gaps = 103/373 (27%)
Query: 32 MKKEILPSMIKNKEKRSAV---HAKLKHQKKVEKRKKLKARDA----AEKRALELGEEPP 84
M K PS +KNK KR + + K K Q K+++R L +A A+K+ L
Sbjct: 1 MPKRFEPSSVKNKIKREELAHKNKKAKGQAKLQRRLALAKEEAKDPSAKKKRL------- 53
Query: 85 ARMTPRTIENTREPDETVCRPDDDELFAGN---------------DADEFSSILKQ---- 125
A PRT++NTR+ D + D A+ ++ I
Sbjct: 54 AENVPRTLDNTRDFDPSFLTADPSSSHPSTLESSEPGPSTQTQDPTAESYTDISSDPFSS 113
Query: 126 ----------GCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT----YDLKKII 171
PK+LITT + F EL+ + P + + +R ++L +I
Sbjct: 114 YFSSSTTADPSIPPKVLITTSAKATRVTYDFCEELVGIFPGAEFIRRPKKGRGFELGRIA 173
Query: 172 EYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPE 231
+A + + ++IVV+ N ++P+A+ ++ LPDGPTA+FKL+ + L K I H T H PE
Sbjct: 174 GWAAGRGYGNLIVVNENMKKPNAITMVHLPDGPTAYFKLTSIALTKQIFGHARATAHNPE 233
Query: 232 LVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYM 291
LVLNNF TRLGH VGR+ Q+ FP PEF+GR+VVT HNQRDF+FFR H
Sbjct: 234 LVLNNFVTRLGHTVGRMFQTFFPALPEFQGRQVVTLHNQRDFLFFRRH------------ 281
Query: 292 WTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECG 351
RY F T E LQE G
Sbjct: 282 --------------------RYAFRTPEK------------------------VALQEIG 297
Query: 352 PRFTLKLVSLQHG 364
PRFTLKL SL+ G
Sbjct: 298 PRFTLKLRSLKKG 310
>gi|403415097|emb|CCM01797.1| predicted protein [Fibroporia radiculosa]
Length = 394
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 194/395 (49%), Gaps = 50/395 (12%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTRE 97
PS IKNK KR + K K QK+ K ++ A+ AE ++ + PRT++NTR+
Sbjct: 8 PSSIKNKVKREEISRKQKKQKRQNKLERRLAQAKAEANDPLAKKKRREQNVPRTLDNTRQ 67
Query: 98 PDETVC-----------------------RPD---DDELFAGNDADEFSSILK----QGC 127
D ++ PD DE A D FSS
Sbjct: 68 FDPSILTANPAAQPEASTSSTPAEHGHAHSPDHQPQDESAADIANDPFSSYFSGTGDPSV 127
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG---TYDLKKIIEYAKKKDFTSIIV 184
PK+LITT + F EL++V P + + +R +++ +I +A +D++ ++V
Sbjct: 128 PPKVLITTSPKATRTTYNFCDELVNVFPGAEFIRRKKGKGFEMGRIAGWAAGRDYSHLMV 187
Query: 185 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 244
V+ + ++ +A+ I+ LP+GPTA+FKL+ + K I H PT H PELVLN F TRLGH
Sbjct: 188 VNEDMKKLNAITIVYLPEGPTAYFKLTSVEFSKQIHGHARPTEHFPELVLNGFVTRLGHT 247
Query: 245 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRC-------VPLEFISCYMWTILCS 297
VGRL Q+LFP PEF+GR+VVT HNQRDF+FFR HR V L+ I L S
Sbjct: 248 VGRLFQTLFPPMPEFQGRQVVTLHNQRDFLFFRRHRYAFRSTEKVSLQEIGPRFTLKLRS 307
Query: 298 YLTSI--MKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 355
+ +K F+T E D +G+ K + E +Q+ +E G
Sbjct: 308 LRKGLPAVKNLGEPSKPLEFDTFE----DGDGEDVKMGE-EGQEKQEPDQDDEEEG---V 359
Query: 356 LKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
K + E++WV KPE++T+R FFL
Sbjct: 360 EKEAQVPKKVLPPTEDEYQWVWKPELETTRSTFFL 394
>gi|392576963|gb|EIW70093.1| hypothetical protein TREMEDRAFT_30267 [Tremella mesenterica DSM
1558]
Length = 419
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 152/273 (55%), Gaps = 19/273 (6%)
Query: 126 GCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG---TYDLKKIIEYAKKKDFTSI 182
G PKILITT F +L +V P ++KR ++L ++ + K+DF ++
Sbjct: 158 GPPPKILITTSPSPGKSTYRFCDDLKNVFPGGEFFKRPKGKGFELGRVARWGIKRDFVAV 217
Query: 183 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 242
I+V+ + +EP+A+ +I LP+GPTA+F+L+ + L +I H P+ H PEL+LNNF T LG
Sbjct: 218 IIVNEDHKEPNAITLIKLPEGPTAYFRLTSIQLGSEIYGHAKPSPHSPELILNNFTTLLG 277
Query: 243 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILC-SYLTS 301
+ VGRL SLFP P+FRGR+VVT HNQRDF+FFR HR YM++ + L
Sbjct: 278 NSVGRLFGSLFPPLPQFRGRQVVTLHNQRDFLFFRRHR---------YMFSSPTRARLQE 328
Query: 302 IMKAFCYYECRYIFETKES-KGSDANGKKAKDAKSEKTSQQKVITR---LQECGPRFTLK 357
I F + R++ + + +D DA+ E+ S+Q+ + E G T
Sbjct: 329 IGPRFT-LKLRWLRKGLPAVTAADGRVPGGGDAEEEEISRQEKMDEDEAAAEMGKESTEV 387
Query: 358 LVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ D + E+EW KP+M+ SRR FFL
Sbjct: 388 KGKPVIPSLDEE-QEYEWKWKPKMEVSRRTFFL 419
>gi|299745085|ref|XP_001831462.2| ribosome production factor 1 [Coprinopsis cinerea okayama7#130]
gi|298406426|gb|EAU90309.2| ribosome production factor 1 [Coprinopsis cinerea okayama7#130]
Length = 456
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 132/391 (33%), Positives = 182/391 (46%), Gaps = 65/391 (16%)
Query: 38 PSMIKNKEKRSAV---HAKLKHQKKVEKRKKLKARDA----AEKRALELGEEPPARMTPR 90
PS I+NK KR + + K K Q K+++R +L ++A A+K+ L A PR
Sbjct: 8 PSTIRNKIKREEIVRKNKKAKTQDKLKRRLELAKQEANDPLAKKKRL-------AENVPR 60
Query: 91 TIENTREPDETVCRPDDDELFA---GND------------------ADEFSSILKQGCAP 129
T++NTRE D ++ D + A GN A F+SI P
Sbjct: 61 TLDNTREFDPSILTADPTQPEASGSGNGESSTAHEERAADIATDPFASYFNSIDDPSIPP 120
Query: 130 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRG---TYDLKKIIEYAKKKDFTSIIVVH 186
KILITT S F EL+ V P + + +R +++ +I + +D
Sbjct: 121 KILITTSPKASKATYNFCDELVGVFPGAEFRQRKKGKGFEMGRIAGWCADRD-------- 172
Query: 187 TNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVG 246
A+ ++ LPDGPTA+FKL+ + L K I H T H PELVLN F TRLGH VG
Sbjct: 173 -------AITLVHLPDGPTAYFKLTSVELTKQIYGHARATPHHPELVLNGFVTRLGHAVG 225
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRC-------VPLEFISCYMWTILCSYL 299
R+ Q+ FP PEF+GR+VVT HNQRDFIFFR HR V L+ I L S
Sbjct: 226 RMFQTAFPPLPEFQGRQVVTLHNQRDFIFFRRHRYAFRSPEKVALQEIGPRFTLKLRSLK 285
Query: 300 TSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 359
I + E T ++ D G+ + K + Q+ + E P
Sbjct: 286 KGIPAVYNLGEAPAPL-TLDNDDDDPVGEVQPEQKQDGDQDQE----MAEAAPDEASSSS 340
Query: 360 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ T K E W KPE++T+RR FFL
Sbjct: 341 KKKGKTVPPKQNEVLWQWKPELETTRRTFFL 371
>gi|353227380|emb|CCA77890.1| related to RPF1-involved in the assembly of the large ribosomal
subunit [Piriformospora indica DSM 11827]
Length = 347
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/350 (33%), Positives = 164/350 (46%), Gaps = 79/350 (22%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTRE 97
PS IKNK KR +H K +KK K K+ + E+ E +E A P+T +N RE
Sbjct: 8 PSQIKNKIKRDEIHRAAKREKKQAKLKRRLLQAEKERSDPEAKKERLAANVPKTQDNMRE 67
Query: 98 PDETV-----------------CRPDDD-ELFAGND--ADEFSSILKQGCAPKILITTCR 137
D ++ P+ + L ND A F S PK+LITT
Sbjct: 68 YDPSMLTVNPTTQNTTEDAGHNVDPNQEANLDMDNDPFASYFDSDADPSIPPKVLITTSP 127
Query: 138 FNSNRGPAFISELLSVIPNSHYYKRG---TYDLKKIIEYAKKKDFTSIIVVHTNRREPDA 194
+ F EL+ + P + + +R +++ I +A + + ++IVV+ + ++P+
Sbjct: 128 KATRTTYDFCDELVGIFPGAEFIRRKKGKGFEIGVIAGWAAGRGYGAMIVVNEDMKKPNG 187
Query: 195 LLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP 254
+ +I LP GPTA+FKL+ + L K I H T H PEL+LNNF+TRLGH VGR+ Q+LFP
Sbjct: 188 ITLIHLPHGPTAYFKLTSVQLTKQIFGHARATPHNPELILNNFSTRLGHAVGRMFQTLFP 247
Query: 255 QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYI 314
+ PEF GR+VVT HNQRDF+FFR H RY
Sbjct: 248 RLPEFEGRQVVTLHNQRDFLFFRRH--------------------------------RYA 275
Query: 315 FETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 364
F + E LQE GPRFTLKL L+ G
Sbjct: 276 FRSPEKAA------------------------LQEIGPRFTLKLRWLKKG 301
>gi|328909165|gb|AEB61250.1| ribosome production factor 1-like protein, partial [Equus caballus]
Length = 272
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 140/222 (63%), Gaps = 5/222 (2%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q ++++KL A+ +K LG++ P + P+TI+N R
Sbjct: 55 SEIKNKQRRHLMFTRWKQQ---QRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVY 111
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET+ P+D+E+ DEF+S + +PKILITT R +L +VIPNSH
Sbjct: 112 DETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSH 171
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+
Sbjct: 172 VYYRRGLALKKIIPQCISRDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKE 231
Query: 219 IKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEF 259
IK G +PT HIPE++LNNF TRLGH R+ SLFP +P+
Sbjct: 232 IKRRGKDPTEHIPEIILNNFTTRLGHS-RRMFASLFPHNPQL 272
>gi|393240388|gb|EJD47914.1| Brix-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 343
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 175/396 (44%), Gaps = 103/396 (26%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
IKNK KR V+ K + + K K+ R EK+ L + A P+T +N R+ E
Sbjct: 5 IKNKVKREQVYRKQRREHTQAKLKERIERAQLEKKDPALRAKRKAENVPKTQDNMRDAYE 64
Query: 101 TVCRPDDDELFAGNDADEFS-SILKQGCAP--------------------KILITTCRFN 139
R D+D + E S S L + A K+LITT
Sbjct: 65 P-HRDDEDAMQDAEQQPEASTSQLPKTAADHDDDDDDDDDEAPPPRTPSCKVLITTSPKV 123
Query: 140 SNRGPAFISELLSVIPNSHYYKR----GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDAL 195
+ F EL+ V P+S + +R + + I +A ++ +T++IVV+ +R+ P+A+
Sbjct: 124 TKATYDFCDELVGVFPDSEFVRRLRKNRAFSIGNIAIWAARRGYTALIVVNEDRKVPNAI 183
Query: 196 LIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQ 255
++ LP+GPTA+FKLS + L K I H + H PEL+LN F T LGH VGR+ Q+LFP
Sbjct: 184 TLVQLPNGPTAYFKLSSIELTKQIFGHARASPHHPELILNGFVTTLGHTVGRMFQTLFPP 243
Query: 256 SPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIF 315
PEF GR+VVT HNQRDF+FFR H RY F
Sbjct: 244 LPEFEGRQVVTLHNQRDFLFFRRH--------------------------------RYAF 271
Query: 316 ETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE--- 372
+ E LQE GPRFTLKL L+ K E
Sbjct: 272 RSTEKVA------------------------LQEIGPRFTLKLRWLKKSLPAPKKDEPRA 307
Query: 373 ------------------FEWVHKPEMDTSRRRFFL 390
+EW+ K E++ SRR FFL
Sbjct: 308 KDGEAPPEQEQTGEKDEGYEWIWKKELEVSRRTFFL 343
>gi|405123223|gb|AFR97988.1| coiled-coil protein [Cryptococcus neoformans var. grubii H99]
Length = 434
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 188/369 (50%), Gaps = 27/369 (7%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTRE 97
P+ ++N K++ + L ++ + ++ K + E A+ L P + E++
Sbjct: 77 PASLQNLAKKATEASALVNEDDLMGKQSSKELSSREDSAV-LRSGPSSDQEEDVGESSEM 135
Query: 98 PDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNS 157
PD + D E +A I Q +P+ILITT + F +L +V P
Sbjct: 136 PDWEIEEKVDGE---DQEASAMRDITTQ-SSPRILITTSPSPCKQTYQFCDDLKNVFPGG 191
Query: 158 HYYKRG---TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
++KR +++ ++ +A K+ + ++IVV+ + + P+A+ +I LP GPTA+FKLS ++
Sbjct: 192 EFFKRPKGRGFEIGRVSRWASKRGYQALIVVNEDHKIPNAVTLINLPSGPTAYFKLSSII 251
Query: 215 LRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFI 274
L +I H PT H PEL+LNNF T LG+ VG+L SLFP+ P+FRGR+VVT HNQRDF+
Sbjct: 252 LSSNIYGHARPTPHSPELILNNFTTLLGNSVGQLFGSLFPRQPQFRGRQVVTLHNQRDFL 311
Query: 275 FFRHHRCVPLEFISCYM------WTILCSYLTSIMKAFCYYECRYIF---ETKESKGSDA 325
FFR HR + S + +T+ +L + + + E G+
Sbjct: 312 FFRRHRYMFSSATSAKLQEIGPRFTLKLRWLRKGLPSVTAPDGHASIGGDPADEIYGATV 371
Query: 326 NGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT----FDTKGGEFEWVHKPEM 381
+ A+ E +++ L+E G K ++ GT D + E+EW KP+M
Sbjct: 372 GPSSEEIARDELDEEKEA---LKEIGQ--PAKKKNVHEGTEVPPLDEE-QEYEWKWKPKM 425
Query: 382 DTSRRRFFL 390
+ SRR FFL
Sbjct: 426 EVSRRTFFL 434
>gi|226478930|emb|CAX72960.1| Ribosome production factor 1 [Schistosoma japonicum]
Length = 312
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 171/342 (50%), Gaps = 56/342 (16%)
Query: 60 VEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEF 119
+ K + KAR+ KR PA + P+T+E R DET+ +D+E+ ++ DE
Sbjct: 16 IHKERIQKARERRIKRKQRKESGAPAGI-PQTLETLRTVDETIVPREDEEVVIEHETDEL 74
Query: 120 SSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDF 179
SSI PKIL+T R F +L VIPN R LKKII A ++ F
Sbjct: 75 SSIFSGEVTPKILLTHSDRVCPRTIGFCKDLCLVIPNIQLVARWHLPLKKIIPLAIERGF 134
Query: 180 TSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN-------HGNPTGHIPEL 232
T +++V+ ++++ ++L++ LP+GPTA F+L+ ++LR+++++ N T P L
Sbjct: 135 TCLLIVNEDQKKINSLIVSHLPNGPTATFRLTNVLLRREMRSTRKVKYVESNVT---PHL 191
Query: 233 VLNNFATRLGHRVGRLIQSLFPQS---PEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISC 289
+ F TRLG R R++ LFP P R + FHNQRD+IFFRH+R + IS
Sbjct: 192 ITTRFMTRLGLRTERILSGLFPNDSRLPPQPHSRTIVFHNQRDYIFFRHYRYIHRNTIS- 250
Query: 290 YMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQE 349
D N K K +++E + + E
Sbjct: 251 --------------------------------NDDGNENKTK-SRNEHIA-------MNE 270
Query: 350 CGPRFTLKLVSLQHGTFDTKGGEFEWVH-KPEMDTSRRRFFL 390
GP+FTLKL S+Q GTFD++ G +EWV K E+ SRR F L
Sbjct: 271 VGPKFTLKLRSIQLGTFDSQFGNYEWVRKKTEIGRSRRTFVL 312
>gi|134109667|ref|XP_776512.1| hypothetical protein CNBC4380 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259190|gb|EAL21865.1| hypothetical protein CNBC4380 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 434
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 151/278 (54%), Gaps = 22/278 (7%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG---TYDLKKIIEYAKKKDFTSIIVV 185
P+ILITT + F +L +V P ++KR +++ ++ +A K+ + ++IVV
Sbjct: 163 PRILITTSPSPCKQTYQFCDDLKNVFPGGEFFKRPKGRGFEIGRVSRWASKRGYRALIVV 222
Query: 186 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRV 245
+ + + P+A+ +I LP GPTA+FKLS + L +I H PT H PEL+LNNF T LG+ V
Sbjct: 223 NEDHKIPNAITLINLPSGPTAYFKLSSITLSSNIYGHARPTPHSPELILNNFTTLLGNSV 282
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYM------WTILCSYL 299
GRL SLFP P+FRGR+VVT HNQRDF+FFR HR + S + +T+ +L
Sbjct: 283 GRLFGSLFPPQPQFRGRQVVTLHNQRDFLFFRRHRYMFSSATSAKLQEIGPRFTLKLRWL 342
Query: 300 TSIMKAFCYYECRYIF---ETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 356
+ + + E G++ K + A+ E + + L+E G
Sbjct: 343 RKGLPSVTAPDGHASIGGDPADEIYGTEVGPSKEEIAQDELDEEDEA---LKEIGQPTQK 399
Query: 357 KLVSLQHGT----FDTKGGEFEWVHKPEMDTSRRRFFL 390
K ++ GT D + E+EW KP+M+ SRR FFL
Sbjct: 400 K--NVYEGTEVPPLDEE-QEYEWKWKPKMEVSRRTFFL 434
>gi|58264840|ref|XP_569576.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57225808|gb|AAW42269.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 434
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 151/278 (54%), Gaps = 22/278 (7%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG---TYDLKKIIEYAKKKDFTSIIVV 185
P+ILITT + F +L +V P ++KR +++ ++ +A K+ + ++IVV
Sbjct: 163 PRILITTSPSPCKQTYQFCDDLKNVFPGGEFFKRPKGRGFEIGRVSRWASKRGYRALIVV 222
Query: 186 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRV 245
+ + + P+A+ +I LP GPTA+FKLS + L +I H PT H PEL+LNNF T LG+ V
Sbjct: 223 NEDHKIPNAITLINLPSGPTAYFKLSSITLSSNIYGHARPTPHSPELILNNFTTLLGNSV 282
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYM------WTILCSYL 299
GRL SLFP P+FRGR+VVT HNQRDF+FFR HR + S + +T+ +L
Sbjct: 283 GRLFGSLFPPQPQFRGRQVVTLHNQRDFLFFRRHRYMFPSATSAKLQEIGPRFTLKLRWL 342
Query: 300 TSIMKAFCYYECRYIF---ETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 356
+ + + E G++ K + A+ E + + L+E G
Sbjct: 343 RKGLPSVTAPDGHASIGGDPADEIYGTEVGPSKEEIAQDELDEEDEA---LKEIGQPAQK 399
Query: 357 KLVSLQHGT----FDTKGGEFEWVHKPEMDTSRRRFFL 390
K ++ GT D + E+EW KP+M+ SRR FFL
Sbjct: 400 K--NVYEGTEVPPLDEE-QEYEWKWKPKMEVSRRTFFL 434
>gi|225562195|gb|EEH10475.1| RNA processing factor [Ajellomyces capsulatus G186AR]
Length = 433
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 147/310 (47%), Gaps = 49/310 (15%)
Query: 89 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGC--APKILITTCRFNSNRGPAF 146
P E P ++ R + +L A +F S+ +G PKILITT ++ A
Sbjct: 165 PSATERATSPTQS-SRSTNLDLAPDALAAKFPSLFTKGPPPTPKILITTSINSTLHAQAH 223
Query: 147 ISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGL 200
+ L + PNS Y +R Y +++I ++A + FT+++VV +++ + I+ L
Sbjct: 224 L--LTDLFPNSVYIRRSAHKHSHKYSVREISKFASNRKFTAVVVVEEDQKRVSGITIVHL 281
Query: 201 PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR 260
P GPT HF +S + K + HGN TGH PEL+LNNF T LG L QSLFP PE
Sbjct: 282 PVGPTFHFSVSNWIEGKKLPGHGNSTGHWPELILNNFRTPLGMLAAHLFQSLFPPQPELE 341
Query: 261 GRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKES 320
GR+VVT HNQRD+IF R H RY+F K
Sbjct: 342 GRQVVTLHNQRDYIFVRRH--------------------------------RYVFREKRE 369
Query: 321 KGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPE 380
G K+ K + V T LQE GPRFTLKL + G G E+EW K
Sbjct: 370 TEKSVVGPDGKEMK----GVEGVRTGLQELGPRFTLKLRRIDKGIQRASGQEWEW--KGG 423
Query: 381 MDTSRRRFFL 390
M+ R +F L
Sbjct: 424 MEKQRTKFQL 433
>gi|164662501|ref|XP_001732372.1| hypothetical protein MGL_0147 [Malassezia globosa CBS 7966]
gi|159106275|gb|EDP45158.1| hypothetical protein MGL_0147 [Malassezia globosa CBS 7966]
Length = 438
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/290 (36%), Positives = 147/290 (50%), Gaps = 56/290 (19%)
Query: 127 CAPKILITTC-----------RFNSNRGPA-----FISELLSVIPNSHYYKRGTYD---L 167
P ILITT N+ PA F+ ELL+V P + Y R L
Sbjct: 179 APPAILITTSLPSNATSPHLLSANARSHPAEAVREFVKELLNVFPGAEYRPRAKAQGAGL 238
Query: 168 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG 227
KI +A+ + + +++V+ + ++P +L ++ LP GPTA F+L+ + L KDI H PT
Sbjct: 239 GKICRWARARRYDAVLVIGESNKKPCSLTLVALPLGPTALFRLTSVSLGKDIFGHARPTP 298
Query: 228 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRC------ 281
H PELVLNNF T LGHRVGRL+Q LFP P+ GR+VVT HNQRDFIFFR HR
Sbjct: 299 HTPELVLNNFTTALGHRVGRLLQHLFPLVPQLEGRQVVTAHNQRDFIFFRRHRYEFRSPE 358
Query: 282 -VPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQ 340
L+ I L S + + K ++ R++ E +ES A +++ S
Sbjct: 359 KAALQEIGPRFTLKLHSLTSGLPKGAGAWDGRFVDELEESP-----------AAAQRASA 407
Query: 341 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ V + ++ T D G EF+W KP+M SRR F+L
Sbjct: 408 EDVD---------------AAEYSTND--GVEFKW--KPKMSVSRRNFYL 438
>gi|325091801|gb|EGC45111.1| RNA processing factor 1 [Ajellomyces capsulatus H88]
Length = 433
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 147/310 (47%), Gaps = 49/310 (15%)
Query: 89 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGC--APKILITTCRFNSNRGPAF 146
P E P ++ R + +L A +F SI +G PKILITT ++ A
Sbjct: 165 PSATERATSPTQS-SRSTNLDLAPDALAAKFPSIFTKGPPPTPKILITTSINSTLHAQAH 223
Query: 147 ISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGL 200
+ L + PNS Y +R Y +++I ++A + FT+++VV +++ + I+ L
Sbjct: 224 L--LTDLFPNSVYIRRSAHKHSHKYSVREISKFASNRKFTAVVVVEEDQKRVSGITIVHL 281
Query: 201 PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR 260
P GPT HF +S + K + HGN TGH PEL+LNNF T LG L +SLFP PE
Sbjct: 282 PVGPTFHFSVSNWIEGKKLPGHGNSTGHWPELILNNFRTPLGMLAAHLFRSLFPPQPELE 341
Query: 261 GRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKES 320
GR+VVT HNQRD+IF R H RY+F K
Sbjct: 342 GRQVVTLHNQRDYIFVRRH--------------------------------RYVFREKRE 369
Query: 321 KGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPE 380
G K+ K + V T LQE GPRFTLKL + G G E+EW K
Sbjct: 370 TEKSVVGPDGKEMK----GVEGVRTGLQELGPRFTLKLRRIDKGIQRASGQEWEW--KGG 423
Query: 381 MDTSRRRFFL 390
M+ R +F L
Sbjct: 424 MEKQRTKFQL 433
>gi|240277282|gb|EER40791.1| RNA processing factor 1 [Ajellomyces capsulatus H143]
Length = 433
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 147/310 (47%), Gaps = 49/310 (15%)
Query: 89 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGC--APKILITTCRFNSNRGPAF 146
P E P ++ R + +L A +F S+ +G PKILITT ++ A
Sbjct: 165 PSATERATSPTQS-SRSTNLDLAPDALAAKFPSLFTKGPPPTPKILITTSINSTLHAQAH 223
Query: 147 ISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGL 200
+ L + PNS Y +R Y +++I ++A + FT+++VV +++ + I+ L
Sbjct: 224 L--LTDLFPNSVYIRRSAHKQSHKYSVREISKFASNRKFTAVVVVEEDQKRVSGITIVHL 281
Query: 201 PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR 260
P GPT HF +S + K + HGN TGH PEL+LNNF T LG L +SLFP PE
Sbjct: 282 PVGPTFHFSVSNWIEGKKLPGHGNSTGHWPELILNNFRTPLGMLAAHLFRSLFPPQPELE 341
Query: 261 GRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKES 320
GR+VVT HNQRD+IF R H RY+F K
Sbjct: 342 GRQVVTLHNQRDYIFVRRH--------------------------------RYVFREKRE 369
Query: 321 KGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPE 380
G K+ K + V T LQE GPRFTLKL + G G E+EW K
Sbjct: 370 TEKSVVGPDGKEMK----GVEGVRTGLQELGPRFTLKLRRIDKGIQRASGQEWEW--KGG 423
Query: 381 MDTSRRRFFL 390
M+ R +F L
Sbjct: 424 MEKQRTKFQL 433
>gi|321253709|ref|XP_003192825.1| nucleolar protein; Rpf1p [Cryptococcus gattii WM276]
gi|317459294|gb|ADV21038.1| Nucleolar protein, putative; Rpf1p [Cryptococcus gattii WM276]
Length = 429
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 147/278 (52%), Gaps = 22/278 (7%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG---TYDLKKIIEYAKKKDFTSIIVV 185
P+ILITT + F +L +V P ++KR +++ ++ +A K+ + ++IVV
Sbjct: 158 PRILITTSPSPCKQTYQFCDDLKNVFPGGEFFKRPKGKGFEIGRVSRWASKRGYGALIVV 217
Query: 186 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRV 245
+ + + P+A+ +I LP GPTA+FKLS + L +I H T H PEL+LNNF T LG+ V
Sbjct: 218 NEDHKIPNAVTLINLPSGPTAYFKLSSITLSSNIYGHARSTPHSPELILNNFTTLLGNSV 277
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYM------WTILCSYL 299
GRL SLFP P+FRGR+VVT HNQRDF+FFR HR + S + +T+ +L
Sbjct: 278 GRLFGSLFPPQPQFRGRQVVTLHNQRDFLFFRRHRYMFSSATSAKLQEIGPRFTLKLRWL 337
Query: 300 TSIMKAFCYYECRYIFETKESK---GSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 356
+ + + + G+D + A+ EK + + L+E G
Sbjct: 338 RKGLPSVAAPDGHVSVGGDPADDIYGADVGPNSEEIAQEEKDEEDEA---LKEIGQPAQK 394
Query: 357 KLVSLQHGTFDTKG----GEFEWVHKPEMDTSRRRFFL 390
K +G + E+EW KP+M+ SRR FFL
Sbjct: 395 KNA---YGETEVPALDEEQEYEWKWKPKMEVSRRTFFL 429
>gi|258571684|ref|XP_002544645.1| hypothetical protein UREG_04162 [Uncinocarpus reesii 1704]
gi|237904915|gb|EEP79316.1| hypothetical protein UREG_04162 [Uncinocarpus reesii 1704]
Length = 419
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/270 (35%), Positives = 135/270 (50%), Gaps = 52/270 (19%)
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 181
APKILITT ++ A I L PNS Y +R + +++I ++A +D+T+
Sbjct: 191 APKILITTSLNSTLHSQAAI--LTEFFPNSIYIRRSAHRYSHKFSVREIAKFAANRDYTA 248
Query: 182 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 241
++VV +++ L ++ LP GPT HF +S + K + HGNPTGH PEL+LNNF T L
Sbjct: 249 VVVVEEDQKRVSGLTVVHLPVGPTFHFSVSNWIEGKKLPGHGNPTGHWPELILNNFRTPL 308
Query: 242 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTS 301
G L ++LFP P+ GR+VVT HNQRD+IF R H
Sbjct: 309 GLLTAHLFRTLFPPQPDLIGRQVVTLHNQRDYIFVRRH---------------------- 346
Query: 302 IMKAFCYYECRYIFETK---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 358
RY+F K E DA+G + K + + LQE GPRFTLKL
Sbjct: 347 ----------RYVFRDKRETEKSVVDADGNEIKGVEG-------IRAGLQELGPRFTLKL 389
Query: 359 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 388
+ G + G E+EW K M+ R +F
Sbjct: 390 RRVDKGIQRSSGQEWEW--KGRMEKQRTKF 417
>gi|295660509|ref|XP_002790811.1| brix domain-containing protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281364|gb|EEH36930.1| brix domain-containing protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 437
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 133/269 (49%), Gaps = 46/269 (17%)
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 181
APKILITT ++ A + L + PNS Y +R Y +++I ++A ++FT+
Sbjct: 209 APKILITTSINSTLHDQAQL--LTDLFPNSVYIRRSAHKYAHKYSVREISKFASNRNFTA 266
Query: 182 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 241
++VV +++ + I+ LP GPT HF +S V K + HGN TGH PEL+LNNF T L
Sbjct: 267 LVVVEEDQKRVSGMTIVHLPVGPTFHFSVSNWVEGKKLPGHGNSTGHWPELILNNFRTPL 326
Query: 242 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTS 301
G L ++LFP PE GR+VVT HNQRD+IF R H
Sbjct: 327 GMLAAHLFRTLFPAQPELVGRQVVTLHNQRDYIFVRRH---------------------- 364
Query: 302 IMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 361
RY+F K G K+ K + + T LQE GPRFTLKL +
Sbjct: 365 ----------RYVFREKRETEKSVVGADGKEMK----GVEGIRTGLQELGPRFTLKLRRV 410
Query: 362 QHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
G G E+EW K M+ R +F L
Sbjct: 411 DKGIQRASGQEWEW--KGGMEKQRTKFQL 437
>gi|225685036|gb|EEH23320.1| ribosome production factor 1 [Paracoccidioides brasiliensis Pb03]
gi|226294348|gb|EEH49768.1| brix domain-containing protein [Paracoccidioides brasiliensis Pb18]
Length = 437
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 133/269 (49%), Gaps = 46/269 (17%)
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 181
APKILITT ++ A + L + PNS Y +R Y +++I ++A ++FT+
Sbjct: 209 APKILITTSINSTLHDQAQL--LTDLFPNSVYIRRSAHKYAHKYSVREISKFASNRNFTA 266
Query: 182 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 241
++VV +++ + I+ LP GPT HF +S V K + HGN TGH PEL+LNNF T L
Sbjct: 267 LVVVEEDQKRVSGMTIVHLPVGPTFHFSVSNWVEGKKLPGHGNSTGHWPELILNNFRTPL 326
Query: 242 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTS 301
G L ++LFP PE GR+VVT HNQRD+IF R H
Sbjct: 327 GMLAAHLFRTLFPAQPELVGRQVVTLHNQRDYIFVRRH---------------------- 364
Query: 302 IMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 361
RY+F K G K+ K + + T LQE GPRFTLKL +
Sbjct: 365 ----------RYVFREKRETEKSVVGADGKEMK----GVEGIRTGLQELGPRFTLKLRRV 410
Query: 362 QHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
G G E+EW K M+ R +F L
Sbjct: 411 DKGIQRASGQEWEW--KGGMEKQRTKFQL 437
>gi|167377601|ref|XP_001734460.1| U3 small nucleolar ribonucleoprotein imp4 [Entamoeba dispar SAW760]
gi|165903983|gb|EDR29356.1| U3 small nucleolar ribonucleoprotein imp4, putative [Entamoeba
dispar SAW760]
Length = 311
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 166/338 (49%), Gaps = 55/338 (16%)
Query: 60 VEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDET-VCRPDDDELFAGNDADE 118
+ KRKK A ++R L + E P+T+E+ R D++ V +D+E DE
Sbjct: 22 LSKRKKEMASIRRKRREL-IKEGKIKPQQPQTLESKRIKDDSFVDFQNDEEAVEEIKNDE 80
Query: 119 FSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKD 178
+S+ K G PKI++T+ + F L + N+ Y++R + KII YAK+ D
Sbjct: 81 YSAYYK-GREPKIIVTSTIAAHSNTKKFAYLLSRIFYNAQYFERKQSTMHKIINYAKRND 139
Query: 179 FTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN-PTGHIP-ELVLNN 236
+T IIV + N +E L II +P GP+ HFKL L+ KDIK H T H+P E +
Sbjct: 140 YTDIIVCNDNHKECTDLYIIHMPCGPSFHFKLFNLMKPKDIKGHVTVSTWHVPCECLTTG 199
Query: 237 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILC 296
F TRLG V R + +LF Q P F+GRRVVTFH+QRDFIFFRHH
Sbjct: 200 FQTRLGVMVARQLNALFSQKPNFKGRRVVTFHSQRDFIFFRHH----------------- 242
Query: 297 SYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 356
I++ E+K N +AK V + E GPRF L
Sbjct: 243 -----------------IYQFDEAKD---NFDRAKGP---------VKCLIDELGPRFIL 273
Query: 357 KLVSLQHGTFDTKGGEFEWVHKPEM----DTSRRRFFL 390
KL S+Q GT +T E+ + + DTS+ +F L
Sbjct: 274 KLRSIQRGTMNTVNPEYIYFRNIDKSNPDDTSKSKFML 311
>gi|67468832|ref|XP_650412.1| ribosome biogenesis protein [Entamoeba histolytica HM-1:IMSS]
gi|56467034|gb|EAL45026.1| ribosome biogenesis protein, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449708212|gb|EMD47714.1| ribosome biogenesis protein, putative [Entamoeba histolytica KU27]
Length = 311
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 166/338 (49%), Gaps = 55/338 (16%)
Query: 60 VEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDET-VCRPDDDELFAGNDADE 118
+ KRKK A ++R L + E P+T+E+ R D++ V +D+E DE
Sbjct: 22 LSKRKKEMASIRRKRREL-IKEGKIKPQQPQTLESKRIKDDSFVDFKNDEEAVEEIKNDE 80
Query: 119 FSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKD 178
+S+ K G PKI++T+ + F L + N+ Y++R + KII YAK+ D
Sbjct: 81 YSAYYK-GREPKIIVTSTIAAHSNTKKFAYLLSRIFYNAQYFERKQSTMHKIINYAKRND 139
Query: 179 FTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN-PTGHIP-ELVLNN 236
+T IIV + N +E L II +P GP+ HFKL L+ KDIK H T H+P E +
Sbjct: 140 YTDIIVCNDNHKECTDLYIIHMPCGPSFHFKLFNLMKPKDIKGHVTVSTWHVPCECLTTG 199
Query: 237 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILC 296
F TRLG V R + +LF Q P F+GRRVVTFH+QRDFIFFRHH
Sbjct: 200 FQTRLGVMVARQLNALFSQKPNFKGRRVVTFHSQRDFIFFRHH----------------- 242
Query: 297 SYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 356
I++ E+K N +AK V + E GPRF L
Sbjct: 243 -----------------IYQFDEAKD---NFDRAKGP---------VKCLIDELGPRFIL 273
Query: 357 KLVSLQHGTFDTKGGEFEWVHKPEM----DTSRRRFFL 390
KL S+Q GT +T E+ + + DTS+ +F L
Sbjct: 274 KLRSIQRGTMNTVNPEYIYFRNIDKSNPDDTSKSKFML 311
>gi|407042759|gb|EKE41520.1| ribosome biogenesis protein, putative [Entamoeba nuttalli P19]
Length = 311
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 165/338 (48%), Gaps = 55/338 (16%)
Query: 60 VEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDET-VCRPDDDELFAGNDADE 118
+ KRKK A ++R L + E P+T+E R D++ V +D+E DE
Sbjct: 22 LSKRKKEMASIRRKRREL-IKEGKIKPQQPQTLETKRIKDDSFVDFKNDEEAVEEIKNDE 80
Query: 119 FSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKD 178
+S+ K G PKI++T+ + F L + N+ Y++R + KII YAK+ D
Sbjct: 81 YSAYYK-GREPKIIVTSTIAAHSNTKKFAYLLSRIFYNAQYFERKQSTMHKIINYAKRND 139
Query: 179 FTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN-PTGHIP-ELVLNN 236
+T IIV + N +E L II +P GP+ HFKL L+ KDIK H T H+P E +
Sbjct: 140 YTDIIVCNDNHKECTDLYIIHMPCGPSFHFKLFNLMKPKDIKGHVTVSTWHVPCECLTTG 199
Query: 237 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILC 296
F TRLG V R + +LF Q P F+GRRVVTFH+QRDFIFFRHH
Sbjct: 200 FQTRLGVMVARQLNALFSQKPNFKGRRVVTFHSQRDFIFFRHH----------------- 242
Query: 297 SYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 356
I++ E+K N +AK V + E GPRF L
Sbjct: 243 -----------------IYQFDEAKD---NFDRAKGP---------VKCLIDELGPRFIL 273
Query: 357 KLVSLQHGTFDTKGGEFEWVHKPEM----DTSRRRFFL 390
KL S+Q GT +T E+ + + DTS+ +F L
Sbjct: 274 KLRSIQRGTMNTVNPEYIYFRNIDKSNPDDTSKSKFML 311
>gi|425766567|gb|EKV05173.1| RNA processing factor 1 [Penicillium digitatum PHI26]
gi|425781720|gb|EKV19667.1| RNA processing factor 1 [Penicillium digitatum Pd1]
Length = 431
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 139/283 (49%), Gaps = 48/283 (16%)
Query: 116 ADEFSSILKQGC--APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDL 167
A +F ++ +G PKILITT ++ G A L V PNS Y +R + +
Sbjct: 189 AAKFPTLFTEGPPPTPKILITTGLNSTLHGQA--ETLTEVFPNSVYIRRNAHRYSHKFSI 246
Query: 168 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG 227
++I ++A ++FT+++V++ +++ P L I+ LP GPT HF +S + K + HG T
Sbjct: 247 REISKFAANRNFTTVVVLNEDQKRPSGLTIVHLPVGPTFHFTISNWIEGKRLPGHGRATE 306
Query: 228 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFI 287
H PEL+LNNF T LG L ++LFP PEF GR+VVT HNQRD+IF R H
Sbjct: 307 HWPELILNNFRTPLGLLTAHLFRTLFPPQPEFEGRQVVTLHNQRDYIFVRRH-------- 358
Query: 288 SCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRL 347
RY+F K G K E + + T L
Sbjct: 359 ------------------------RYVFREKRETEKAVVGADGK----EMLGVEGIRTGL 390
Query: 348 QECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
QE GPRFTLKL + G G E+EW K M+ +R F L
Sbjct: 391 QELGPRFTLKLRRVDKGIQRASGQEWEW--KGGMEKTRTLFQL 431
>gi|224031483|gb|ACN34817.1| unknown [Zea mays]
gi|413950308|gb|AFW82957.1| hypothetical protein ZEAMMB73_160675 [Zea mays]
Length = 108
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/143 (57%), Positives = 92/143 (64%), Gaps = 35/143 (24%)
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFC 307
+IQSLFPQ P FRGRRVVTFHNQRD+IFFRHHR
Sbjct: 1 MIQSLFPQDPNFRGRRVVTFHNQRDYIFFRHHR--------------------------- 33
Query: 308 YYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 367
YIFETKE K + + SEK Q+VI RLQECGPRFTLKL++LQHGTFD
Sbjct: 34 -----YIFETKEKKVASKEKTSGSKSGSEK---QQVICRLQECGPRFTLKLLTLQHGTFD 85
Query: 368 TKGGEFEWVHKPEMDTSRRRFFL 390
T+ GE+EWVHKP+MDTSRRRFFL
Sbjct: 86 TRSGEYEWVHKPDMDTSRRRFFL 108
>gi|302904019|ref|XP_003048985.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729919|gb|EEU43272.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 412
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 136/273 (49%), Gaps = 49/273 (17%)
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 181
PKILITT ++ A + L + PNS+Y R Y L++I +YA +++T+
Sbjct: 179 VPKILITTSLNSTIHEEAHL--LCGLFPNSNYIPRSAHRYGHKYSLREICKYASNREYTA 236
Query: 182 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 241
++++ + ++P L ++ LP GPT HF ++ + K + HGNPT H PEL+LNNF T L
Sbjct: 237 VVLLKEDSKKPTGLSVVHLPTGPTFHFSITNWIEGKKLPGHGNPTNHYPELLLNNFKTPL 296
Query: 242 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTS 301
G +L Q++FP PEF+GR+VVT HNQRD+IF R H
Sbjct: 297 GLLTAKLFQTMFPPRPEFQGRQVVTLHNQRDYIFVRRH---------------------- 334
Query: 302 IMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 361
RY+F K G K+ K + + LQE GPRFTLKL +
Sbjct: 335 ----------RYVFRDKRQTEKSIVGADGKEIK----GVENIRAGLQELGPRFTLKLRRV 380
Query: 362 QHGTFDTKGGEFE----WVHKPEMDTSRRRFFL 390
G G E E W K +M+ R+RF L
Sbjct: 381 DKG-IGRAGSEGEDATQWEWKAKMEKDRKRFNL 412
>gi|322709377|gb|EFZ00953.1| Brix domain containing protein [Metarhizium anisopliae ARSEF 23]
Length = 415
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 156/311 (50%), Gaps = 56/311 (18%)
Query: 93 ENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAP--KILITTCRFNSNRGPAFISEL 150
+N+ P T D L + A +F S+ AP K+L+TT N + ++L
Sbjct: 148 DNSVAPSTTSTNLD---LTPSSLALKFPSLFSDIPAPDPKVLVTTS---LNSTIHYEAQL 201
Query: 151 L-SVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDG 203
L ++ PNS Y R + Y L++I ++A +++T++++V + ++P L ++ LP G
Sbjct: 202 LGTLFPNSTYIPRSSHRYGHKYSLREICKFATNREYTTVLLVKEDLKKPTGLSVVHLPSG 261
Query: 204 PTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRR 263
PT HF +S + + + HGNPT H PEL+LNNF T LG +L Q+LFP PEF+GR+
Sbjct: 262 PTFHFSISNWIEGRKLPGHGNPTNHYPELLLNNFKTPLGLLTAKLFQTLFPPRPEFQGRQ 321
Query: 264 VVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGS 323
VVT HNQRD+IF R HR + + E R T E
Sbjct: 322 VVTLHNQRDYIFVRRHR-------------------------YVFREKR----TTEKSIV 352
Query: 324 DANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE----WVHKP 379
A+GK+ K + + LQE GPRFTLKL + G G E E W K
Sbjct: 353 GADGKEMKGVEGIRAG-------LQELGPRFTLKLRRVDKG-IGRAGSEGEDATQWEWKA 404
Query: 380 EMDTSRRRFFL 390
+M+ R+RF L
Sbjct: 405 KMEKDRKRFNL 415
>gi|322697173|gb|EFY88956.1| Brix domain containing protein [Metarhizium acridum CQMa 102]
Length = 415
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 139/273 (50%), Gaps = 51/273 (18%)
Query: 129 PKILITTCRFNSNRGPAFISELL-SVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 181
PK+L+TT N + ++LL ++ PNS Y R + Y L++I ++A +D+T+
Sbjct: 183 PKVLVTTS---INSTIHYEAQLLGTLFPNSTYIPRSSHRYGHKYSLREICKFATNRDYTT 239
Query: 182 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 241
+++V + ++P L ++ LP GPT +F +S + + + HGNPT H PEL+LNNF T L
Sbjct: 240 VLLVKEDLKKPTGLSVVHLPSGPTFYFSISNWIEGRKLPGHGNPTNHYPELLLNNFKTPL 299
Query: 242 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTS 301
G +L Q+LFP PEF+GR+VVT HNQRD+IF R H
Sbjct: 300 GLLTAKLFQTLFPPRPEFQGRQVVTLHNQRDYIFVRRH---------------------- 337
Query: 302 IMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 361
RY+F K + G K+ K + + LQE GPRFTLKL +
Sbjct: 338 ----------RYVFREKRATEKSIVGADGKEMK----GVEGIRAGLQELGPRFTLKLRRV 383
Query: 362 QHGTFDTKGGEFE----WVHKPEMDTSRRRFFL 390
G G E E W K +M+ R+RF L
Sbjct: 384 DKG-IGRAGSEGEDATQWEWKAKMEKDRKRFNL 415
>gi|261189482|ref|XP_002621152.1| RNA processing factor 1 [Ajellomyces dermatitidis SLH14081]
gi|239591729|gb|EEQ74310.1| RNA processing factor 1 [Ajellomyces dermatitidis SLH14081]
gi|239608957|gb|EEQ85944.1| RNA processing factor 1 [Ajellomyces dermatitidis ER-3]
gi|327354026|gb|EGE82883.1| RNA processing factor 1 [Ajellomyces dermatitidis ATCC 18188]
Length = 434
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 132/269 (49%), Gaps = 46/269 (17%)
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 181
PKILITT ++ A + L + PNS Y +R Y +++I ++A ++FT+
Sbjct: 206 TPKILITTSINSTLHEQAHL--LTDLFPNSVYIRRSAHKYAHKYSVREISKFASNRNFTA 263
Query: 182 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 241
++VV +++ + I+ LP GPT HF +S + K + HGN TGH PEL+LNNF T L
Sbjct: 264 VVVVEEDQKRVSGMTIVHLPVGPTFHFSVSNWIEGKKLPGHGNSTGHWPELILNNFRTPL 323
Query: 242 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTS 301
G L ++LFP PE GR+VVT HNQRD+IF R H
Sbjct: 324 GMLSAHLFRTLFPPQPELEGRQVVTLHNQRDYIFVRRH---------------------- 361
Query: 302 IMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 361
RY+F K G K+ K + + T LQE GPRFTLKL +
Sbjct: 362 ----------RYVFREKRETEKSVVGADGKEIK----GVEGIRTGLQELGPRFTLKLRRV 407
Query: 362 QHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
G G E+EW K M+ R +F L
Sbjct: 408 DKGIQRASGQEWEW--KGGMEKQRTKFQL 434
>gi|255943791|ref|XP_002562663.1| Pc20g01020 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587398|emb|CAP85431.1| Pc20g01020 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 431
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 137/283 (48%), Gaps = 48/283 (16%)
Query: 116 ADEFSSILKQGC--APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDL 167
A +F ++ +G PKILITT NS L V PNS Y +R + +
Sbjct: 189 AAKFPTLFTEGPPPTPKILITTG-LNSTLH-VQAETLTDVFPNSVYIRRNAHRYSHKFSI 246
Query: 168 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG 227
++I ++A ++FT+++V++ +++ P L I+ LP GPT HF +S + K + HG T
Sbjct: 247 REISKFASNRNFTAVVVLNEDQKRPSGLTIVHLPVGPTFHFSISNWIDGKRLPGHGRATD 306
Query: 228 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFI 287
H PEL+LNNF T LG L ++LFP PEF GR+VVT HNQRD+IF R H
Sbjct: 307 HWPELILNNFRTPLGLLTAHLFRTLFPPQPEFEGRQVVTLHNQRDYIFVRRH-------- 358
Query: 288 SCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRL 347
RY+F K G K E + + T L
Sbjct: 359 ------------------------RYVFREKRETEKAVVGADGK----EMAGAEGIRTGL 390
Query: 348 QECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
QE GPRFTLKL + G G E+EW K M+ +R F L
Sbjct: 391 QELGPRFTLKLRRVDKGIQRASGQEWEW--KGGMEKTRTLFQL 431
>gi|323507696|emb|CBQ67567.1| related to RPF1-involved in the assembly of the large ribosomal
subunit [Sporisorium reilianum SRZ2]
Length = 436
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 142/267 (53%), Gaps = 27/267 (10%)
Query: 146 FISELLSVIPNSHYYKRG---TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 202
F+ ELLSV P + Y R L KI +A+++ F +++VV +R+EP AL +I LP
Sbjct: 175 FVYELLSVFPGAEYRPRAKAQGVGLGKICGWARERRFGAVLVVGESRKEPFALTLIQLPH 234
Query: 203 GPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 262
GPTA F+L+ + +I +PT H PEL+LNNF T LGHRVG ++QSLFP+ P+ GR
Sbjct: 235 GPTAFFRLTSIRTADEIYGKAHPTPHTPELILNNFTTVLGHRVGTVLQSLFPKIPQLEGR 294
Query: 263 RVVTFHNQRDFIFFRHHRCV-------PLEFISCYMWTILCSYLTSIMKAFCYYECRYIF 315
+VVT HNQRD+IFFR HR + L+ I L S S+ K ++ +Y
Sbjct: 295 QVVTCHNQRDYIFFRRHRYMFKSDSKTALQEIGPRFTLKLHSLKESLPKGAGVWDGKYTE 354
Query: 316 ETKESKGSDANGKKAKDA------------KSEKTSQQKVITRLQECGPRFTLKLVSLQH 363
E E + + +A++ E +QKV + + QH
Sbjct: 355 EYAELEPEELEALQAQNGDEEAAAAAAAGAGGEAGGEQKVA---EASAASSSSSKKKRQH 411
Query: 364 GTFDTKGGEFEWVHKPEMDTSRRRFFL 390
G +T G +F+W KP+M SRR F+L
Sbjct: 412 GEEETVGLDFQW--KPKMSVSRRNFYL 436
>gi|400601177|gb|EJP68820.1| brix domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 415
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 141/275 (51%), Gaps = 55/275 (20%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKIL+TT ++ A + L ++ PNS+Y R + Y L+ I ++ +D+T++
Sbjct: 183 PKILVTTSLNSTLHEEAHL--LTTLFPNSNYIPRSSHRYGHKYSLRDICKFCIGRDYTAV 240
Query: 183 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 242
+++ + ++P + I+ LP GPT HF +S V K + HGNPT H PEL+LNNF T LG
Sbjct: 241 VLLKEDSKKPTGMSIVHLPSGPTFHFSISNWVEGKKLPGHGNPTNHYPELLLNNFKTPLG 300
Query: 243 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSI 302
++ Q+LFP +PEF+GR+V+T HNQRD+IF R H
Sbjct: 301 LLTAKIFQTLFPPAPEFQGRQVITLHNQRDYIFVRRH----------------------- 337
Query: 303 MKAFCYYECRYIFETK---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 359
RY+F K E A+G+K K +++ LQE GPRFTLKL
Sbjct: 338 ---------RYVFRDKRATEKSVVAADGEKMKGV-------EQIRAGLQELGPRFTLKLR 381
Query: 360 SLQHGTFDTKGGE----FEWVHKPEMDTSRRRFFL 390
+ G G E +W K +M+ R+RF L
Sbjct: 382 RVDKG-IGRAGSEGDDATQWEWKAKMEKDRKRFNL 415
>gi|169765241|ref|XP_001817092.1| RNA processing factor 1 [Aspergillus oryzae RIB40]
gi|83764946|dbj|BAE55090.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 432
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 141/286 (49%), Gaps = 54/286 (18%)
Query: 116 ADEFSSILKQGC--APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDL 167
A +F S+ PKILITT ++ A L + PNS Y +R + L
Sbjct: 190 ATKFPSLFPSETPPTPKILITTSLNSTLHNEA--KALTDLFPNSQYIRRTAHRYSHKFSL 247
Query: 168 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG 227
K+I +A +++T+++V+ + + P L +I LP GP HF +S V K I HG T
Sbjct: 248 KEIATFAANRNYTAVLVLQEDSKRPSGLDVIHLPKGPMFHFTISNWVDGKRIPGHGVGTE 307
Query: 228 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFI 287
H PEL+LNNF T LG G + +SLFP P+ GR+VVT HNQRD+IF R H
Sbjct: 308 HWPELILNNFRTPLGIVTGAIFRSLFPPQPDIEGRQVVTLHNQRDYIFVRRH-------- 359
Query: 288 SCYMWTILCSYLTSIMKAFCYYECRYIF-ETKESKGS--DANGKKAKDAKSEKTSQQKVI 344
RYIF E +E++ S DA+GK+ K A+ +
Sbjct: 360 ------------------------RYIFREKRETEKSVIDADGKEMKGAEGIRAG----- 390
Query: 345 TRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GPRFTLKL + G G E+EW K M+ R +F L
Sbjct: 391 --LQELGPRFTLKLRRIDKGIQRASGQEWEW--KAGMEKQRTKFQL 432
>gi|193654819|ref|XP_001950585.1| PREDICTED: probable ribosome production factor 1-like
[Acyrthosiphon pisum]
Length = 313
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 119/202 (58%), Gaps = 8/202 (3%)
Query: 86 RMTPRTIENTREPDETVCRPDDDE-------LFAGNDADEFSSILKQGCAPKILITTCRF 138
+ PRTIENTREPD TV DD++ L A + DEF+ PK+LIT
Sbjct: 57 KQVPRTIENTREPDSTVLHSDDEDYDQKAQDLAAEFEHDEFADYYSHLYKPKVLITYKAK 116
Query: 139 NSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLII 198
+ F L ++PNS R +K+ I+ A K +T +I+++ +R EP+ L+++
Sbjct: 117 PLRKVREFGKILTEIVPNSVRIFRRDASVKETIQAAINKGYTDLIIINEDRNEPNGLILV 176
Query: 199 GLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPE 258
LPDGPTA+F+LS ++ + + T H PE++ NF T LG V R++ ++F Q E
Sbjct: 177 HLPDGPTAYFRLSNVIF-PNKRQRKEFTDHRPEVITTNFTTGLGKTVARMLGAVFHQDAE 235
Query: 259 FRGRRVVTFHNQRDFIFFRHHR 280
F+GR VVT HNQRD+IFFRHHR
Sbjct: 236 FKGRHVVTMHNQRDYIFFRHHR 257
>gi|302771191|ref|XP_002969014.1| hypothetical protein SELMODRAFT_145922 [Selaginella moellendorffii]
gi|300163519|gb|EFJ30130.1| hypothetical protein SELMODRAFT_145922 [Selaginella moellendorffii]
Length = 300
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 144/301 (47%), Gaps = 65/301 (21%)
Query: 93 ENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLS 152
+NT EP V DD+ +AG PKIL+TT R S+R F+ EL
Sbjct: 62 DNTAEPTTHV---DDEYAYAGE------------VDPKILLTTSRDPSSRLTQFVKELKI 106
Query: 153 VIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSK 212
V PN+ RG + +I+E + DFT II+VH +R EPD L++ LP GPTA+F L
Sbjct: 107 VFPNAQRMNRGGQVIAEIVESCRAHDFTDIIMVHEHRGEPDGLIVCHLPYGPTAYFGLMN 166
Query: 213 LVLRKDIKNH---GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHN 269
+V R DIK+ G + P L+LNNF T+LG R +++ LFP P+ +R++TF N
Sbjct: 167 VVTRHDIKDKKGLGTMSEAYPHLILNNFNTKLGMRTSNILKYLFP-VPKPDSKRLITFAN 225
Query: 270 QRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKK 329
Q+D+I FRH +P SC + SI
Sbjct: 226 QQDYISFRH---IPSPHFSCLKPARFQGGVKSI--------------------------- 255
Query: 330 AKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFF 389
L+E GPRF L+L ++ GT D + EWV +P M++SR+R
Sbjct: 256 ----------------ELKEVGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMNSSRKRAA 299
Query: 390 L 390
L
Sbjct: 300 L 300
>gi|238503460|ref|XP_002382963.1| RNA processing factor 1 [Aspergillus flavus NRRL3357]
gi|220690434|gb|EED46783.1| RNA processing factor 1 [Aspergillus flavus NRRL3357]
gi|391863385|gb|EIT72696.1| ribosome biogenesis protein [Aspergillus oryzae 3.042]
Length = 432
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 141/286 (49%), Gaps = 54/286 (18%)
Query: 116 ADEFSSILKQGC--APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDL 167
A +F S+ PKILITT ++ A L + PNS Y +R + L
Sbjct: 190 ATKFPSLFPSETPPTPKILITTSLNSTLHNEA--KALTDLFPNSQYIRRTAHRYSHKFSL 247
Query: 168 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG 227
K+I +A +++T+++V+ + + P L +I LP GP HF +S V K I HG T
Sbjct: 248 KEIATFAANRNYTAVLVLQEDSKRPSGLDVIHLPKGPMFHFTISNWVDGKRIPGHGVGTE 307
Query: 228 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFI 287
H PEL+LNNF T LG G + +SLFP P+ GR+VVT HNQRD+IF R H
Sbjct: 308 HWPELILNNFRTPLGIVTGAIFRSLFPPQPDIEGRQVVTLHNQRDYIFVRRH-------- 359
Query: 288 SCYMWTILCSYLTSIMKAFCYYECRYIF-ETKESKGS--DANGKKAKDAKSEKTSQQKVI 344
RYIF E +E++ S DA+GK+ K A+ +
Sbjct: 360 ------------------------RYIFREKRETEKSVIDADGKEMKGAEGIRAG----- 390
Query: 345 TRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GPRFTLKL + G G E+EW K M+ R +F L
Sbjct: 391 --LQELGPRFTLKLRRIDKGIQRASGQEWEW--KAGMEKQRTKFQL 432
>gi|119182386|ref|XP_001242328.1| hypothetical protein CIMG_06224 [Coccidioides immitis RS]
gi|392865223|gb|EAS31001.2| RNA processing factor 1 [Coccidioides immitis RS]
Length = 423
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 134/272 (49%), Gaps = 52/272 (19%)
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 181
PKILITT ++ A I L PNS Y +R + +++I ++A +++T+
Sbjct: 195 TPKILITTSLNSTLHDQASI--LTEFFPNSVYIRRSAHRYSHKFSVREISKFASNRNYTA 252
Query: 182 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 241
++VV +++ L ++ LP GPT HF +S V K + HGNPTGH PEL+LNNF T L
Sbjct: 253 LVVVEEDQKRVSGLTVVHLPVGPTFHFSVSNWVEGKKLPGHGNPTGHWPELILNNFRTPL 312
Query: 242 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTS 301
G L ++LFP P+ GR+VVT HNQRD+IF R H
Sbjct: 313 GLLTAHLFRTLFPPQPDLIGRQVVTLHNQRDYIFVRRH---------------------- 350
Query: 302 IMKAFCYYECRYIFETK---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 358
RY+F K E DA+G + K + + LQE GPRFTLKL
Sbjct: 351 ----------RYVFRDKRETEKSVVDADGNEIKGVEG-------IRAGLQELGPRFTLKL 393
Query: 359 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ G G E+EW K M+ R +F L
Sbjct: 394 RRIDKGIQRRSGQEWEW--KGRMEKQRTKFQL 423
>gi|346326815|gb|EGX96411.1| RNA processing factor 1 [Cordyceps militaris CM01]
Length = 411
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 142/276 (51%), Gaps = 55/276 (19%)
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 181
APKIL+TT ++ A + L ++ PNS+Y R + Y L++I ++ +D+T+
Sbjct: 178 APKILVTTSLNSTLHQEAHL--LTTLFPNSNYIPRSSHRYGHKYSLREICKFCIGRDYTA 235
Query: 182 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 241
++++ + ++P + ++ LP GPT HF +S V K + HGNPT H PEL+LNNF T L
Sbjct: 236 VVLLKEDLKKPTGMSVVHLPSGPTFHFSISNWVEGKKLPGHGNPTNHYPELLLNNFKTPL 295
Query: 242 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTS 301
G ++ Q+LFP +PEF+GR+V+T HNQRD+IF R H
Sbjct: 296 GLLTAKIFQTLFPPAPEFQGRQVITLHNQRDYIFVRRH---------------------- 333
Query: 302 IMKAFCYYECRYIFETK---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 358
RY+F K E +G+K K +++ LQE GPRFTLKL
Sbjct: 334 ----------RYVFRDKRATEKSVLATDGEKLKGV-------EEIRAGLQELGPRFTLKL 376
Query: 359 VSLQHGTFDTKGGE----FEWVHKPEMDTSRRRFFL 390
+ G G E +W K +M+ R+RF L
Sbjct: 377 RRVDKG-IGRAGSEGDDATQWEWKAKMEKDRKRFNL 411
>gi|407922813|gb|EKG15905.1| Anticodon-binding protein [Macrophomina phaseolina MS6]
Length = 419
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 139/282 (49%), Gaps = 48/282 (17%)
Query: 116 ADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLS-VIPNSHYYKRGT------YDLK 168
A +F ++ + PKILITT NS +ELL+ + PNS Y +R Y +K
Sbjct: 179 AAKFPALFQPPKEPKILITTG-INSTLHKE--AELLTKLFPNSQYVRRTAHRYGHKYSVK 235
Query: 169 KIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH 228
+I ++A +++T++I++ ++++P L ++ LP+GP HF +S + + HGNPT H
Sbjct: 236 EISKFAANREYTTVIILMEDQKKPSGLDVVHLPNGPMFHFSISNWIEGAKLPGHGNPTEH 295
Query: 229 IPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFIS 288
PEL+LNNF T LG L +++FP PE GR+VVT HNQRD+IF R H
Sbjct: 296 YPELILNNFRTPLGLLTAHLFRTMFPPQPELEGRQVVTLHNQRDYIFVRRH--------- 346
Query: 289 CYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQ 348
RY+F K + G K K + + LQ
Sbjct: 347 -----------------------RYVFRDKRASEKPVVGADGKPMK----GVEDIKAGLQ 379
Query: 349 ECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
E GPRFTLKL + G G E++W K + R RF L
Sbjct: 380 ELGPRFTLKLRRIDKGIQKASGQEWQW--KAGSEKVRTRFAL 419
>gi|303319139|ref|XP_003069569.1| Brix domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240109255|gb|EER27424.1| Brix domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320041028|gb|EFW22961.1| RNA processing factor 1 [Coccidioides posadasii str. Silveira]
Length = 419
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 134/272 (49%), Gaps = 52/272 (19%)
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 181
PKILITT ++ A I L PNS Y +R + +++I ++A +++T+
Sbjct: 191 TPKILITTSLNSTLHDQASI--LTEFFPNSVYIRRSAHRYSHKFSVREISKFASNRNYTA 248
Query: 182 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 241
++VV +++ L ++ LP GPT HF +S V K + HGNPTGH PEL+LNNF T L
Sbjct: 249 LVVVEEDQKRVSGLTVVHLPVGPTFHFSVSNWVEGKKLPGHGNPTGHWPELILNNFRTPL 308
Query: 242 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTS 301
G L ++LFP P+ GR+VVT HNQRD+IF R H
Sbjct: 309 GLLTAHLFRTLFPPQPDLIGRQVVTLHNQRDYIFVRRH---------------------- 346
Query: 302 IMKAFCYYECRYIFETK---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 358
RY+F K E DA+G + K + + LQE GPRFTLKL
Sbjct: 347 ----------RYVFRDKRETEKSVVDADGNEIKGVEGIRAG-------LQELGPRFTLKL 389
Query: 359 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ G G E+EW K M+ R +F L
Sbjct: 390 RRIDKGIQRRSGQEWEW--KGRMEKQRTKFQL 419
>gi|358381069|gb|EHK18745.1| hypothetical protein TRIVIDRAFT_216628, partial [Trichoderma virens
Gv29-8]
Length = 413
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 138/272 (50%), Gaps = 49/272 (18%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKIL+TT ++ A + L ++ PNS Y R + Y L++I +++ KD+T++
Sbjct: 181 PKILVTTSLNSTLHDEAQL--LCTLFPNSRYIPRSSHRYGYKYSLREICKFSASKDYTAV 238
Query: 183 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 242
+++ + ++P L I+ LP GPT HF +S + K + HGNPT H PEL+LNNF T LG
Sbjct: 239 VLMKEDLKKPTGLSIVHLPKGPTFHFTISNWIEGKKLPGHGNPTNHYPELMLNNFKTPLG 298
Query: 243 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSI 302
+L Q++FP PEF GR+VV HNQRDFIF R R
Sbjct: 299 LLTAKLFQTMFPPRPEFEGRQVVALHNQRDFIFVRRFR---------------------- 336
Query: 303 MKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQ 362
+ + + R E +DA GK + +S + LQE GPRFTLKL +
Sbjct: 337 ---YAFRDKR----ATEKSVTDAEGKALEGVESIRAG-------LQELGPRFTLKLRRVD 382
Query: 363 HGTFDTKGGEFE----WVHKPEMDTSRRRFFL 390
G G E E W K +M+ R+RF L
Sbjct: 383 KG-IGRAGSEGEDATQWEWKSKMEKDRKRFNL 413
>gi|408397135|gb|EKJ76285.1| hypothetical protein FPSE_03540 [Fusarium pseudograminearum CS3096]
Length = 415
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 132/272 (48%), Gaps = 49/272 (18%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PK+L+TT ++ A + L PNS Y R Y L++I +YA +++T+I
Sbjct: 183 PKVLVTTSLNSTLHEQANV--LCEFFPNSSYVPRSAHRYGHKYSLREICKYATNREYTAI 240
Query: 183 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 242
I++ + ++P L ++ LP GPT HF ++ + K + HGNPT H PEL+LNNF T LG
Sbjct: 241 ILLKEDSKKPTGLTVVHLPSGPTFHFSITNWIEGKKLPGHGNPTNHYPELLLNNFKTPLG 300
Query: 243 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSI 302
+L +LFP PEF+GR+V T HNQRD+IF R H
Sbjct: 301 LLTAKLFMTLFPPKPEFQGRQVTTLHNQRDYIFVRRH----------------------- 337
Query: 303 MKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQ 362
RY+F K G K+ K + + LQE GPRFTLKL +
Sbjct: 338 ---------RYVFREKRQTEKSIVGADGKEVK----GVEGIRAGLQELGPRFTLKLRRVD 384
Query: 363 HGTFDTKGGE----FEWVHKPEMDTSRRRFFL 390
G G E +W K +M+ R+RF L
Sbjct: 385 KG-IGRAGSEGDDATQWEWKAKMEKDRKRFNL 415
>gi|443896062|dbj|GAC73406.1| ribosome biogenesis protein RPF1 [Pseudozyma antarctica T-34]
Length = 439
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 142/270 (52%), Gaps = 21/270 (7%)
Query: 140 SNRGPAFISELLSVIPNSHYYKRG---TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALL 196
S R F+ ELLSV P + Y R L KI +A+++ + +++VV +R+EP AL
Sbjct: 172 SERTREFVDELLSVFPGAEYRPRAKAQGVGLGKICGWARERRYDAVLVVGESRKEPFALT 231
Query: 197 IIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQS 256
+I LP GPTA F+L+ + +I PT H PEL+LNNF T LGHRVG+++Q LFP+
Sbjct: 232 VIQLPHGPTAFFRLTSISTGAEIYGKARPTPHTPELILNNFTTVLGHRVGKVMQGLFPKI 291
Query: 257 PEFRGRRVVTFHNQRDFIFFRHHRCV-------PLEFISCYMWTILCSYLTSIMKAFCYY 309
P+ GR+VVT HNQRD+IFFR HR + L+ I L S S+ K +
Sbjct: 292 PQLEGRQVVTCHNQRDYIFFRRHRYMFKSDSKTALQEIGPRFTLKLHSLKESLPKGAGVW 351
Query: 310 ECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECG-----PRFTLKLVSL--- 361
+ +Y E E + + ++ DA +E + Q P+ S
Sbjct: 352 DGKYTAEYAELEPEELEAMQSADADAEAEAAAHDEAGQQHGSSTGNDPQAQTASASSKKK 411
Query: 362 -QHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
Q G DT G +F+W +P+M SRR F+L
Sbjct: 412 RQRGEEDTTGLDFQW--RPKMSVSRRNFYL 439
>gi|71003301|ref|XP_756331.1| hypothetical protein UM00184.1 [Ustilago maydis 521]
gi|46096336|gb|EAK81569.1| hypothetical protein UM00184.1 [Ustilago maydis 521]
Length = 451
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 141/283 (49%), Gaps = 34/283 (12%)
Query: 140 SNRGPAFISELLSVIPNSHYYKRG---TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALL 196
S R F+ ELLSV P + Y R L KI +A+++ F +++VV +R+EP AL
Sbjct: 171 SERTREFVDELLSVFPGAEYRPRSKAQGVGLGKICGWARERRFGAVLVVGESRKEPFALT 230
Query: 197 IIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQS 256
+I LP GPTA F+LS + +I PT H PEL+LNNF T LGHRVG+++Q LFP+
Sbjct: 231 VISLPHGPTAFFRLSSISTGDEIYGKARPTPHTPELILNNFTTVLGHRVGKVLQCLFPKI 290
Query: 257 PEFRGRRVVTFHNQRDFIFFRHHRCV-------PLEFISCYMWTILCSYLTSIMKAFCYY 309
P+ GR+VVT HNQRD+IFFR HR + L+ I L S S+ K +
Sbjct: 291 PQLEGRQVVTCHNQRDYIFFRRHRYMFKSDSKTALQEIGPRFTLKLHSLKESLPKGAGVW 350
Query: 310 ECRYIFETKESKGSD--------------ANGKKAKDAKSEKTSQQKVITRLQECGPRFT 355
+ +Y E E + + + + A S +Q V + R
Sbjct: 351 DGKYTEEYAELESDELEVLQRQDGQDGQGGQDEDGQMAASAAMDEQIVALGSESTKMRPN 410
Query: 356 LKLVSL--------QHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ Q G +T G +F+W KP+M SRR F+L
Sbjct: 411 TGADASSSTGNKKRQRGEEETVGLDFQW--KPKMSVSRRNFYL 451
>gi|358334226|dbj|GAA33543.2| ribosome production factor 1 [Clonorchis sinensis]
Length = 322
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 177/369 (47%), Gaps = 75/369 (20%)
Query: 46 KRSAVHAKLKHQKKVEKRKKLK-ARDAAEKRALELGEEPPARMTPRTIENTREPDETVCR 104
K + VH HQ+ ++ ++++K A++ ++R L P + P+T+E R DET
Sbjct: 5 KETTVH----HQRDLKLKERVKKAKEHRKQRKLRKESGAPVGI-PQTLETLRTYDETTIV 59
Query: 105 PDDDELFAGNDA--------------DEFSSILKQGCAPKILITTCRFNSNRGPAFISEL 150
D +L A A DE + I + PK+L+T R F EL
Sbjct: 60 ETDPDLIAEEQAVSFNCANFPYHFLQDEVADIFRNERTPKLLLTFSDRVCPRTIGFCKEL 119
Query: 151 LSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKL 210
+IPN R LKKII A + FT+++VV+ ++++ + L++ LP+GPT F+L
Sbjct: 120 TKIIPNMRIAPRWHLPLKKIIPKAIEHGFTALLVVNEDQKKVNTLVVSHLPEGPTVTFRL 179
Query: 211 SKLVLRKDIKNHGNP----TGHIPELVLNNFATRLGHRVGRLIQSLFP----QSPEFRGR 262
S + LR++++ P +P L+ + F TRLG R RLI SLFP +PE R
Sbjct: 180 SNVRLRREMRGRRRPKDIEPDVVPHLITSRFTTRLGRRTERLITSLFPDRSRSTPEGHSR 239
Query: 263 RVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKG 322
VV FHNQRDFIFFRH R + +
Sbjct: 240 TVV-FHNQRDFIFFRHFRY-------------------------------------QQRT 261
Query: 323 SDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEM 381
+ AN K + KS + E GPRFTLKL S+Q GTFDT+ G++EWV K E+
Sbjct: 262 AHANEKNKEPGKS--------YVAMNEVGPRFTLKLRSIQQGTFDTQFGDYEWVRKRSEV 313
Query: 382 DTSRRRFFL 390
+RR F +
Sbjct: 314 GRNRRTFVM 322
>gi|46122177|ref|XP_385642.1| hypothetical protein FG05466.1 [Gibberella zeae PH-1]
Length = 415
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 133/271 (49%), Gaps = 47/271 (17%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PK+L+TT ++ A + L PNS Y R Y L++I +YA +++T+I
Sbjct: 183 PKVLVTTSLNSTLHEQANV--LCEFFPNSSYVPRSAHRYGHKYSLREICKYATNREYTAI 240
Query: 183 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 242
I++ + ++P L ++ LP GPT HF ++ + K + HGNPT H PEL+LNNF T LG
Sbjct: 241 ILLKEDSKKPTGLTVVHLPSGPTFHFSITNWIEGKKLPGHGNPTNHYPELLLNNFKTPLG 300
Query: 243 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSI 302
+L +LFP PEF+GR+V T HNQRD+IF R H
Sbjct: 301 LLTAKLFMTLFPPKPEFQGRQVTTLHNQRDYIFVRRH----------------------- 337
Query: 303 MKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQ 362
RY+F K G K+ K + + LQE GPRFTLKL +
Sbjct: 338 ---------RYVFREKRQTEKSIVGADGKEVK----GVEGIRAGLQELGPRFTLKLRRVD 384
Query: 363 HGT--FDTKGGEF-EWVHKPEMDTSRRRFFL 390
G + G + +W K +M+ R+RF L
Sbjct: 385 KGIGRAGSDGDDATQWEWKAKMEKDRKRFNL 415
>gi|156065257|ref|XP_001598550.1| hypothetical protein SS1G_00639 [Sclerotinia sclerotiorum 1980]
gi|154691498|gb|EDN91236.1| hypothetical protein SS1G_00639 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 414
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 131/273 (47%), Gaps = 49/273 (17%)
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 181
APKIL+TT ++ A + L ++ PNS+Y R Y L++I ++A +++TS
Sbjct: 181 APKILVTTSLNSTLHAEAHL--LCTLFPNSNYVPRSAHRYGYKYSLREICKFATNREYTS 238
Query: 182 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 241
++++ + + P L I+ LP GPT HF + V K + HGNPT H PEL+LNNF T L
Sbjct: 239 VVMLKEDAKVPTGLTIVHLPSGPTCHFSIKNWVEGKKLPGHGNPTNHYPELILNNFRTPL 298
Query: 242 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTS 301
G RL +LFP PE +GR+VVT HNQRD+IF R H
Sbjct: 299 GLLTARLFLTLFPPQPELQGRQVVTLHNQRDYIFVRRH---------------------- 336
Query: 302 IMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 361
RY+F K G K + + + LQE GPRFTLKL +
Sbjct: 337 ----------RYVFREKRETEKSVVGPDGKIVE----GVEGIRAGLQELGPRFTLKLRRV 382
Query: 362 QHGTFDTKGGE----FEWVHKPEMDTSRRRFFL 390
G G E +W K M+ R RF L
Sbjct: 383 DKG-IGRAGSEGDDAVQWQWKAGMEKQRTRFNL 414
>gi|154311323|ref|XP_001554991.1| hypothetical protein BC1G_06514 [Botryotinia fuckeliana B05.10]
gi|347829134|emb|CCD44831.1| similar to RNA processing factor 1 [Botryotinia fuckeliana]
Length = 414
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 131/273 (47%), Gaps = 49/273 (17%)
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 181
APKIL+TT ++ A + L ++ PNS+Y R Y L++I ++A +++TS
Sbjct: 181 APKILLTTSLNSTLHAEAHL--LCTLFPNSNYVPRSAHRYGHKYSLREICKFATNREYTS 238
Query: 182 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 241
++++ + + P L I+ LP GPT HF + V K + HGNPT H PEL+LNNF T L
Sbjct: 239 VVMLKEDAKVPTGLTIVHLPSGPTCHFSIKNWVEGKKLPGHGNPTNHYPELILNNFRTPL 298
Query: 242 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTS 301
G RL +LFP PE +GR+VVT HNQRD+IF R H
Sbjct: 299 GLLTARLFLTLFPPQPELQGRQVVTLHNQRDYIFVRRH---------------------- 336
Query: 302 IMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 361
RY+F K G K + + + LQE GPRFTLKL +
Sbjct: 337 ----------RYVFREKRETEKSVVGPDGKIVE----GVEGIRAGLQELGPRFTLKLRRV 382
Query: 362 QHGTFDTKGGE----FEWVHKPEMDTSRRRFFL 390
G G E +W K M+ R RF L
Sbjct: 383 DKG-IGRAGSEGDDAVQWQWKAGMEKQRTRFNL 414
>gi|440635818|gb|ELR05737.1| hypothetical protein GMDG_07580 [Geomyces destructans 20631-21]
Length = 416
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 135/272 (49%), Gaps = 47/272 (17%)
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 181
APK+L+TT ++ A + L ++ PNS Y R + +++I ++A +++T+
Sbjct: 183 APKVLLTTSLNSTLHNEAHL--LCTLFPNSTYIPRSAHRYGHKFSVREIAKFATNREYTA 240
Query: 182 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 241
+IVV + ++P L I+ LP GPT HF ++ V K + HGNPT H PEL+LNNF T L
Sbjct: 241 LIVVKEDAKKPTGLSIVHLPHGPTCHFSIANWVEGKKLPGHGNPTNHYPELILNNFRTPL 300
Query: 242 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTS 301
G RL +LFP PE +GR+VVT HNQRD+IF R H
Sbjct: 301 GLLTARLFLTLFPPQPELQGRQVVTLHNQRDYIFVRRH---------------------- 338
Query: 302 IMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 361
RY+F K G + K +++ LQE GPRFTLKL +
Sbjct: 339 ----------RYVFRDKRPTEKSVVGPDGEKVK----GVEEIRAGLQELGPRFTLKLRRV 384
Query: 362 QHGT--FDTKGGE-FEWVHKPEMDTSRRRFFL 390
G ++G + +W K M+ R RF L
Sbjct: 385 DKGIGRAGSQGDDGLQWEWKAHMEKKRTRFNL 416
>gi|67903694|ref|XP_682103.1| hypothetical protein AN8834.2 [Aspergillus nidulans FGSC A4]
gi|40740932|gb|EAA60122.1| hypothetical protein AN8834.2 [Aspergillus nidulans FGSC A4]
gi|259482955|tpe|CBF77923.1| TPA: RNA processing factor 1 (AFU_orthologue; AFUA_5G05930)
[Aspergillus nidulans FGSC A4]
Length = 435
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 135/271 (49%), Gaps = 52/271 (19%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKILITT ++ A I L + PNS Y +R + +++I ++A +++T++
Sbjct: 208 PKILITTSLNSTLHHEAEI--LTQLFPNSVYIRRTAHAHAHKFSIREIAKFASNREYTTL 265
Query: 183 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 242
I++ + ++P L I+ LP GP HF +S V K I HG PT H PEL+LNNF T LG
Sbjct: 266 IILQEDSKKPAGLDIVHLPKGPMFHFSISNWVEGKKIPGHGKPTEHWPELILNNFRTPLG 325
Query: 243 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSI 302
L ++LFP P+ GR+VVT HNQRD+IF R H
Sbjct: 326 LLTAHLFRTLFPPQPDIEGRQVVTLHNQRDYIFVRRH----------------------- 362
Query: 303 MKAFCYYECRYIFETK---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 359
RY+F K E A+GK+ K A+ +T LQE GPRFTLKL
Sbjct: 363 ---------RYVFREKRETEKAVVGADGKEIKGAEGIRTG-------LQELGPRFTLKLR 406
Query: 360 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ G G E+EW K +M+ R F L
Sbjct: 407 RVDKGIQRASGQEWEW--KGKMEKKRTLFQL 435
>gi|388852488|emb|CCF53890.1| related to RPF1-involved in the assembly of the large ribosomal
subunit [Ustilago hordei]
Length = 453
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 124/247 (50%), Gaps = 65/247 (26%)
Query: 146 FISELLSVIPNSHYYKRG---TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 202
F+ ELLSV P + Y R L KI +A+++ F +++VV+ + + P AL +I LP
Sbjct: 179 FVDELLSVFPGAEYRPRSKAQGVGLGKICGWARERRFDAVLVVNESHKAPFALTVIQLPY 238
Query: 203 GPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 262
GPTA F+L+ ++ +I PT H PEL+LNNF T LGHRVG ++QSLFP+ P+ GR
Sbjct: 239 GPTAFFRLTSILSGAEIYGKARPTPHTPELILNNFTTILGHRVGTVLQSLFPKIPQLEGR 298
Query: 263 RVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKG 322
+VVT HNQRD+IFFR H RY+F+ E
Sbjct: 299 QVVTCHNQRDYIFFRRH--------------------------------RYMFKNAEK-- 324
Query: 323 SDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQH------GTFDTKGGEFEWV 376
T LQE GPRFTLKL SL+ G +D K GE +
Sbjct: 325 ----------------------TALQEIGPRFTLKLHSLKEGLPKGAGVWDGKYGEEYEL 362
Query: 377 HKPEMDT 383
K E+D
Sbjct: 363 TKEEVDA 369
>gi|378730455|gb|EHY56914.1| brix-domain ribosomal biogenesis protein [Exophiala dermatitidis
NIH/UT8656]
Length = 446
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 132/267 (49%), Gaps = 46/267 (17%)
Query: 130 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSII 183
KILITT ++ A I L S+ PNS Y +R + + +++I +A + +T++I
Sbjct: 220 KILITTSINSTLHDEAAI--LTSLFPNSKYIRRSSHRYGYKFSVREISSFAHNQGYTAVI 277
Query: 184 VVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGH 243
V+ +++ P + ++ LP GPT HF +S K I HG T H PEL+LNNF T LG
Sbjct: 278 VLEEDQKRPSGMTVVHLPQGPTFHFSISNWYTGKAIPGHGRATDHKPELILNNFTTPLGL 337
Query: 244 RVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIM 303
L +SLFP +P+ +GR+V+T HNQRD+IF R H
Sbjct: 338 VTAHLFRSLFPATPQLQGRQVLTLHNQRDYIFVRRH------------------------ 373
Query: 304 KAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQH 363
RYIF K G K+ K + + LQE GPRFTLKL +
Sbjct: 374 --------RYIFREKRETEKSVVGPDGKEVK----GVEGIRAGLQELGPRFTLKLRRVDK 421
Query: 364 GTFDTKGGEFEWVHKPEMDTSRRRFFL 390
G G ++EW K +M+ +R +F L
Sbjct: 422 GIQRRSGQDWEW--KAKMEKTRTKFQL 446
>gi|406864938|gb|EKD17981.1| brix domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 412
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 132/273 (48%), Gaps = 49/273 (17%)
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 181
APKIL+TT ++ A + L ++ PN++Y R + L++I ++A +++TS
Sbjct: 179 APKILLTTSINSTLHHEANL--LCTLFPNTNYIPRSAHRFGHKFSLREISKFAANRNYTS 236
Query: 182 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 241
+I++ + ++P L I+ LP GPT HF ++ V K + HGNPT H PEL+LNNF T L
Sbjct: 237 VILLKEDSKKPTGLTIVHLPSGPTCHFSIANWVDGKKLPGHGNPTNHYPELILNNFRTPL 296
Query: 242 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTS 301
G RL +LFP PE +GR+VVT HNQRD+IF R H
Sbjct: 297 GLLTARLFLTLFPPQPELQGRQVVTLHNQRDYIFLRRH---------------------- 334
Query: 302 IMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 361
RY+F K G K + + LQE GPRFTLKL +
Sbjct: 335 ----------RYVFREKRETEKSVVGPDGKIV----PGVEGIRAGLQELGPRFTLKLRRV 380
Query: 362 QHGTFDTKGGEFE----WVHKPEMDTSRRRFFL 390
G G E E W K M+ R RF L
Sbjct: 381 DKGV-GRAGSEGEDAVQWQWKAHMEKQRTRFNL 412
>gi|358396279|gb|EHK45660.1| hypothetical protein TRIATDRAFT_41214 [Trichoderma atroviride IMI
206040]
Length = 414
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 139/274 (50%), Gaps = 53/274 (19%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKIL+TT ++ A I L ++ PNS+Y R + Y L++I +++ ++ +T++
Sbjct: 182 PKILVTTSLNSTLHDEAHI--LTTLFPNSNYVPRSSHRYGHKYSLREICKFSAERGYTAV 239
Query: 183 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 242
I++ ++++P L ++ LP GPT HF +S + K + HGNPT H PEL+LNNF T LG
Sbjct: 240 ILMKEDQKKPTGLSVVHLPKGPTFHFSISNWIEGKKLPGHGNPTNHYPELLLNNFKTPLG 299
Query: 243 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSI 302
+L Q++FP PEF GR+V HNQRD+IF R
Sbjct: 300 LLAAKLFQTMFPPRPEFEGRQVTALHNQRDYIFVRR------------------------ 335
Query: 303 MKAFCYYECRYIFETK---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 359
RY+F K E DA G K ++ + LQE GPRFTLKL
Sbjct: 336 --------FRYVFRDKRATEKSVVDAEGNPLKGVEAIRAG-------LQELGPRFTLKLR 380
Query: 360 SLQHGT--FDTKGGE-FEWVHKPEMDTSRRRFFL 390
+ G ++G + +W K +M+ R+RF L
Sbjct: 381 RVDKGVGRAGSEGDDAIQWEWKSKMEKDRKRFNL 414
>gi|327300909|ref|XP_003235147.1| RNA processing factor 1 [Trichophyton rubrum CBS 118892]
gi|326462499|gb|EGD87952.1| RNA processing factor 1 [Trichophyton rubrum CBS 118892]
Length = 432
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 133/271 (49%), Gaps = 52/271 (19%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKILITT ++ A + L PNS Y +R + +++I +A +++T++
Sbjct: 205 PKILITTSLNSTLHKEAKV--LTEFFPNSVYIRRSAHRYGHKFSVREISSFAANRNYTAV 262
Query: 183 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 242
+V+ + + L I+ LP GPT HF +S + K + HGNPT H PEL+LNNF T LG
Sbjct: 263 VVLEEDLKRVSGLTIVHLPVGPTFHFSISNWIEGKKLPGHGNPTSHWPELILNNFRTPLG 322
Query: 243 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSI 302
L ++LFP PEF+GR+VVT HNQRD+IF R H
Sbjct: 323 LLTAHLFRTLFPPQPEFQGRQVVTLHNQRDYIFVRRH----------------------- 359
Query: 303 MKAFCYYECRYIFETK---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 359
RY+F K E DANG + K + + LQE GPRFTLKL
Sbjct: 360 ---------RYVFRDKRETEKCVVDANGVEMKGVEGIRAG-------LQELGPRFTLKLR 403
Query: 360 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ G G ++EW K M+ R +F L
Sbjct: 404 RIDKGIQRKSGQDWEW--KGRMEKVRTKFQL 432
>gi|405974342|gb|EKC38995.1| hypothetical protein CGI_10018826 [Crassostrea gigas]
Length = 340
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 136/263 (51%), Gaps = 57/263 (21%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S++ F E+ + PNS RG Y++K+++E + D T +I++H +
Sbjct: 131 PKIMITTSRDPSSKLKQFAKEVRLIFPNSQRINRGNYEVKQLVEACRSNDVTDLILLHEH 190
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD L++ LP GPTA+F LS +V+R DI + G + P L+ +NF++RLG+RV +
Sbjct: 191 RGVPDGLIVCHLPFGPTAYFTLSNVVMRHDIPDVGTMSEQFPHLIFHNFSSRLGNRVKSI 250
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCY 308
++ LFP P+ +RV+TF N DFI FRHH
Sbjct: 251 LKYLFP-VPKEESKRVITFANDDDFISFRHH----------------------------- 280
Query: 309 YECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF-D 367
+++ E NGK + LQE GPRF +K+ + GT +
Sbjct: 281 -----VYKKTE------NGKDIE---------------LQEVGPRFEMKIYQIILGTIEN 314
Query: 368 TKGGEFEWVHKPEMDTSRRRFFL 390
+ EWV++P M+T+++R FL
Sbjct: 315 VDTADTEWVYRPYMNTTKKRKFL 337
>gi|340515742|gb|EGR45994.1| upstream activation factor subunit [Trichoderma reesei QM6a]
Length = 416
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 137/275 (49%), Gaps = 55/275 (20%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKIL+TT ++ A + + ++ PN++Y R + Y L+ I +++ +D+T++
Sbjct: 184 PKILVTTSLNSTIHDEAQL--ICTLFPNANYIPRSSHRYGYKYSLRDICKFSASRDYTAV 241
Query: 183 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 242
++V ++++P L I+ LP GPT HF +S + K + HGNPT H PEL+LNNF T LG
Sbjct: 242 VLVKEDQKKPTGLSIVHLPKGPTFHFSISNWIEGKKLPGHGNPTNHYPELLLNNFKTPLG 301
Query: 243 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSI 302
+L Q++FP PEF GR+VV HNQRD+IF R
Sbjct: 302 LLTAKLFQTMFPPRPEFEGRQVVALHNQRDYIFVRR------------------------ 337
Query: 303 MKAFCYYECRYIFETK---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 359
RY F K E DA GK + ++ + LQE GPRFTLKL
Sbjct: 338 --------FRYAFRDKRPTEKSVVDAEGKALQGVENIRAG-------LQELGPRFTLKLR 382
Query: 360 SLQHGTFDTKGGE----FEWVHKPEMDTSRRRFFL 390
+ G G E +W K +M+ R+RF L
Sbjct: 383 RVDKGV-GRAGSEGEDAIQWEWKSKMEKDRKRFNL 416
>gi|302505473|ref|XP_003014443.1| hypothetical protein ARB_07005 [Arthroderma benhamiae CBS 112371]
gi|291178264|gb|EFE34054.1| hypothetical protein ARB_07005 [Arthroderma benhamiae CBS 112371]
Length = 437
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 133/271 (49%), Gaps = 52/271 (19%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKILITT ++ A + L PNS Y +R + +++I +A +++T++
Sbjct: 210 PKILITTSLNSTLHKEAKV--LTEFFPNSVYIRRSAHRYGHKFSVREISSFAANRNYTAV 267
Query: 183 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 242
+V+ + + L I+ LP GPT HF +S + K + HGNPT H PEL+LNNF T LG
Sbjct: 268 VVLEEDLKRVSGLTIVHLPVGPTFHFSISNWIEGKKLPGHGNPTSHWPELILNNFRTPLG 327
Query: 243 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSI 302
L ++LFP PEF+GR+VVT HNQRD+IF R H
Sbjct: 328 LLTAHLFRTLFPPQPEFQGRQVVTLHNQRDYIFVRRH----------------------- 364
Query: 303 MKAFCYYECRYIFETK---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 359
RY+F K E DANG + K + + LQE GPRFTLKL
Sbjct: 365 ---------RYVFRDKRETEKCVVDANGVEMKGVEGIRAG-------LQELGPRFTLKLR 408
Query: 360 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ G G ++EW K M+ R +F L
Sbjct: 409 RIDKGIQRKSGQDWEW--KGRMEKVRTKFQL 437
>gi|302664277|ref|XP_003023771.1| hypothetical protein TRV_02083 [Trichophyton verrucosum HKI 0517]
gi|291187784|gb|EFE43153.1| hypothetical protein TRV_02083 [Trichophyton verrucosum HKI 0517]
Length = 437
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 133/271 (49%), Gaps = 52/271 (19%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKILITT ++ A + L PNS Y +R + +++I +A +++T++
Sbjct: 210 PKILITTSLNSTLHKEAKV--LTEFFPNSVYIRRSAHRYGHKFSVREISSFAANRNYTAV 267
Query: 183 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 242
+V+ + + L I+ LP GPT HF +S + K + HGNPT H PEL+LNNF T LG
Sbjct: 268 VVLEEDLKRVSGLTIVHLPVGPTFHFSISNWIEGKKLPGHGNPTSHWPELILNNFRTPLG 327
Query: 243 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSI 302
L ++LFP PEF+GR+VVT HNQRD+IF R H
Sbjct: 328 LLTAHLFRTLFPPQPEFQGRQVVTLHNQRDYIFVRRH----------------------- 364
Query: 303 MKAFCYYECRYIFETK---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 359
RY+F K E DANG + K + + LQE GPRFTLKL
Sbjct: 365 ---------RYVFRDKRETEKCVVDANGVEMKGVEG-------IRAGLQELGPRFTLKLR 408
Query: 360 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ G G ++EW K M+ R +F L
Sbjct: 409 RIDKGIQRKSGQDWEW--KGRMEKVRTKFQL 437
>gi|296808931|ref|XP_002844804.1| brix domain-containing protein [Arthroderma otae CBS 113480]
gi|238844287|gb|EEQ33949.1| brix domain-containing protein [Arthroderma otae CBS 113480]
Length = 431
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 133/271 (49%), Gaps = 52/271 (19%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKILITT ++ A + L PNS Y +R + +++I +A +++T++
Sbjct: 204 PKILITTSLNSTLHKEAKV--LTEFFPNSVYIRRSAHRYSHKFSIREISSFAANRNYTAV 261
Query: 183 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 242
+V+ + + L I+ LP GPT HF +S V K + HGNPT H PEL+LNNF T LG
Sbjct: 262 VVLEEDLKRVSGLTIVHLPIGPTFHFSISNWVEGKRLPGHGNPTSHWPELILNNFRTPLG 321
Query: 243 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSI 302
L ++LFP P+ +GR+VVT HNQRD+IF R H
Sbjct: 322 LLTAHLFRTLFPPQPDLQGRQVVTLHNQRDYIFVRRH----------------------- 358
Query: 303 MKAFCYYECRYIFETK---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 359
RYIF K E + DANG + K + + LQE GPRFTLKL
Sbjct: 359 ---------RYIFRDKRETEKRVVDANGVEMKGVEGIRAG-------LQELGPRFTLKLR 402
Query: 360 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ G G ++EW K M+ R +F L
Sbjct: 403 RIDKGIQRKSGQDWEW--KGRMEKVRTKFQL 431
>gi|315048631|ref|XP_003173690.1| brix domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311341657|gb|EFR00860.1| brix domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 426
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 147/314 (46%), Gaps = 55/314 (17%)
Query: 88 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAP--KILITTCRFNSNRGPA 145
P E P ++ R + +L A +F S+ P KILITT ++ A
Sbjct: 157 VPSATERATSPTQS-TRSTNIDLAPDALAAKFPSLFPTEAPPPPKILITTSLNSTLHKEA 215
Query: 146 FISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIG 199
+ L P+S Y +R + +++I +A +++T+++VV + + L I+
Sbjct: 216 KV--LTEFFPSSVYIRRSAHRYGHKFSVREISAFAANRNYTAVVVVEEDLKRVSGLTIVH 273
Query: 200 LPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEF 259
LP GPT HF +S + K + HGNPT H PEL+LNNF T LG L ++LFP PEF
Sbjct: 274 LPVGPTFHFSISNWIEGKKLPGHGNPTNHWPELILNNFRTPLGLLTAHLFRTLFPPQPEF 333
Query: 260 RGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETK- 318
+GR+VVT HNQRD+IF R H RY+F K
Sbjct: 334 QGRQVVTLHNQRDYIFVRRH--------------------------------RYVFRDKR 361
Query: 319 --ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV 376
E DANG + K + + LQE GPRFTLKL + G G ++EW
Sbjct: 362 ETEKCVVDANGVEMKGVEGIRAG-------LQELGPRFTLKLRRIDKGIQRKSGQDWEW- 413
Query: 377 HKPEMDTSRRRFFL 390
K M+ R +F L
Sbjct: 414 -KGRMEKVRTKFQL 426
>gi|121712628|ref|XP_001273925.1| RNA processing factor 1 [Aspergillus clavatus NRRL 1]
gi|119402078|gb|EAW12499.1| RNA processing factor 1 [Aspergillus clavatus NRRL 1]
Length = 436
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 132/283 (46%), Gaps = 48/283 (16%)
Query: 116 ADEFSSILKQGC--APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDL 167
A +F S+ PKILITT ++ A L + PNS Y +R + +
Sbjct: 194 AAKFPSLFSSEAPPTPKILITTSLNSTLHNEA--ESLTDLFPNSVYIRRTAHRYSHKFSI 251
Query: 168 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG 227
++I +A ++FT+++VV +++ P L I+ LP GPT HF +S+ V K + HGN T
Sbjct: 252 REIASFASNRNFTAVVVVQEDQKRPSGLTIVHLPKGPTFHFTISRWVEGKRLPGHGNATD 311
Query: 228 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFI 287
H PEL+LNNF T LG L +++FP PE GR+VVT HNQRD++F R H
Sbjct: 312 HWPELILNNFRTPLGLLTAHLFRTMFPPQPELEGRQVVTIHNQRDYLFLRRH-------- 363
Query: 288 SCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRL 347
RY+F K G K+ K + + L
Sbjct: 364 ------------------------RYVFREKRETEKSVVGTDGKEIK----GVEGIRAGL 395
Query: 348 QECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
QE GP +KL + G G E+EW K M+ R +F L
Sbjct: 396 QELGPAINMKLRRVDKGIQRASGQEWEW--KGGMEKQRTKFQL 436
>gi|326468705|gb|EGD92714.1| RNA processing factor 1 [Trichophyton tonsurans CBS 112818]
Length = 432
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 146/314 (46%), Gaps = 55/314 (17%)
Query: 88 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAP--KILITTCRFNSNRGPA 145
P E P ++ R + +L A +F S+ P KILITT ++ A
Sbjct: 163 VPSATERATSPTQS-TRSTNIDLAPDALAAKFPSLFPTEAPPPPKILITTSLNSTLHKEA 221
Query: 146 FISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIG 199
+ L PNS Y +R + +++I +A +++T+++V+ + + L I+
Sbjct: 222 KV--LTEFFPNSVYIRRSAHRYGHKFSVREISSFAANRNYTAVVVLEEDLKRVSGLTIVH 279
Query: 200 LPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEF 259
LP GPT HF +S + K + HGNPT H PEL+LNNF T LG L ++LFP PE
Sbjct: 280 LPVGPTFHFSISNWIEGKKLPGHGNPTSHWPELILNNFRTPLGLLTAHLFRTLFPPQPEL 339
Query: 260 RGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETK- 318
+GR+VVT HNQRD+IF R H RY+F K
Sbjct: 340 QGRQVVTLHNQRDYIFVRRH--------------------------------RYVFRDKR 367
Query: 319 --ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV 376
E DANG + K + + LQE GPRFTLKL + G G ++EW
Sbjct: 368 ETEKCVVDANGVEMKGVEGIRAG-------LQELGPRFTLKLRRIDKGIQRKSGQDWEW- 419
Query: 377 HKPEMDTSRRRFFL 390
K M+ R +F L
Sbjct: 420 -KGRMEKVRTKFQL 432
>gi|452840955|gb|EME42892.1| hypothetical protein DOTSEDRAFT_173396 [Dothistroma septosporum
NZE10]
Length = 439
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 130/272 (47%), Gaps = 48/272 (17%)
Query: 127 CAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKK--KD 178
C PK+L+TT ++ A + L ++ PN Y KR Y +++I YA + +
Sbjct: 208 CEPKVLLTTSLNSTLHHEAEL--LTTLFPNCAYIKRTANFHSYKYSIREIASYAAQPERG 265
Query: 179 FTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFA 238
+T I+V++ + ++P L I+ LP GP HF +S + + HGNPT H PEL+LN F
Sbjct: 266 YTHIVVLNEDLKKPKGLDIVHLPHGPMFHFSISNWIPGSRLPGHGNPTNHYPELILNGFK 325
Query: 239 TRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSY 298
T LG L +SLFP PE +GR+VVT HNQRD+IF R H
Sbjct: 326 TPLGLLAAHLFKSLFPPRPEIQGRQVVTLHNQRDYIFVRRH------------------- 366
Query: 299 LTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 358
RY+F K+S G K K + + LQE GPRFTLKL
Sbjct: 367 -------------RYVFRDKKSSEKVIQGTDGKPMKGA----EDIRAGLQELGPRFTLKL 409
Query: 359 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ G G E+EW K + R RF L
Sbjct: 410 RRVDKGIQRASGQEWEW--KAGDEKVRTRFSL 439
>gi|380020454|ref|XP_003694098.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Apis florea]
Length = 311
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 158/347 (45%), Gaps = 85/347 (24%)
Query: 45 EKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCR 104
E+ +H LK + + +K+L DA + A+ +G E T+
Sbjct: 37 EQNIPIHPDLK-KDALNIQKQLAWEDAGPEMAIAIGTEMGG---------------TLGS 80
Query: 105 PDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 164
+DDE D PKI+ITT R S+R F+ EL + PNS RG
Sbjct: 81 HEDDEYRWAGVED-----------PKIVITTSRDPSSRLKMFVKELRLIFPNSQRMNRGN 129
Query: 165 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 224
Y++K++I + D T I+VH +R PD+++I LP GPTA+F +S +++R DI N G
Sbjct: 130 YEMKQLIHACRANDVTDFIIVHEHRGVPDSIIICHLPYGPTAYFTMSDVIMRHDIPNIGT 189
Query: 225 PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPL 284
+ P L+ +NF T+LG RV +++ LFP P+ +R++TF N D+I FR
Sbjct: 190 MSEQYPHLIFHNFKTKLGERVMNILKYLFP-VPKEDSKRIITFANHDDYISFR------- 241
Query: 285 EFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVI 344
++ C+ I +GK +
Sbjct: 242 -----------------------HHTCKKI-----------HGKDIE------------- 254
Query: 345 TRLQECGPRFTLKLVSLQHGTFDTK-GGEFEWVHKPEMDTSRRRFFL 390
L E GPRF L+L ++ GT D + + EW +P M+TS +R FL
Sbjct: 255 --LSEVGPRFQLRLYEIKLGTLDAEAAADIEWALRPYMNTSHKRRFL 299
>gi|449301681|gb|EMC97692.1| hypothetical protein BAUCODRAFT_462868 [Baudoinia compniacensis
UAMH 10762]
Length = 432
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 128/253 (50%), Gaps = 44/253 (17%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PK+LITT ++ A + L S+ P+S Y KR Y +++I YA K +T +
Sbjct: 205 PKVLITTSINSTLHWEAQL--LTSIFPSSTYIKRTAHFHSYKYSVREICAYATNKAYTHV 262
Query: 183 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 242
+++ + + P L I+ LP GP HF +S + + HGNPT H PEL+LN F T LG
Sbjct: 263 VILTEDLKRPKGLDIVHLPAGPMFHFSISHWIEGAKLPGHGNPTNHYPELILNGFRTPLG 322
Query: 243 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSI 302
L +SLFP PE +GR+VVT HNQRD+IFFR H
Sbjct: 323 LLTAHLFKSLFPPRPEIQGRQVVTLHNQRDYIFFRRH----------------------- 359
Query: 303 MKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQ 362
RY+F ++ KGS+ + + A D K + + + LQE GPRFTLKL +
Sbjct: 360 ---------RYVF--RDRKGSEKSIQGA-DGKPMQ-GVEGIRAGLQELGPRFTLKLRRVD 406
Query: 363 HGTFDTKGGEFEW 375
G G E+EW
Sbjct: 407 RGIQRRSGQEWEW 419
>gi|342874830|gb|EGU76749.1| hypothetical protein FOXB_12770 [Fusarium oxysporum Fo5176]
Length = 686
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 127/265 (47%), Gaps = 49/265 (18%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKIL+TT ++ A + L PNS Y R Y L++I +YA ++ T++
Sbjct: 183 PKILVTTSINSTLHEQAHV--LCEFFPNSSYVPRSAHRYGHKYSLREICKYASNREHTAV 240
Query: 183 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 242
I++ + ++P L ++ LP GPT HF ++ + K + HGNPT H PEL+LNNF T LG
Sbjct: 241 ILLKEDSKKPTGLAVVHLPSGPTFHFSITNWIEGKKLPGHGNPTNHYPELLLNNFKTPLG 300
Query: 243 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSI 302
+L +LFP PEF+GR+V T HNQRD+IF R H
Sbjct: 301 LLTAKLFMTLFPPKPEFQGRQVTTLHNQRDYIFVRRH----------------------- 337
Query: 303 MKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL- 361
RY+F K G K+ K + + LQE GPRFTLKL +
Sbjct: 338 ---------RYVFREKRQTEKSIVGADGKEVK----GVEGIRAGLQELGPRFTLKLRRVD 384
Query: 362 ----QHGTFDTKGGEFEWVHKPEMD 382
+ G+ ++EW K E D
Sbjct: 385 KGIGRAGSEGDDATQWEWKAKMEKD 409
>gi|345565870|gb|EGX48818.1| hypothetical protein AOL_s00079g457 [Arthrobotrys oligospora ATCC
24927]
Length = 446
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 132/266 (49%), Gaps = 38/266 (14%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT-YDLKKIIEYAKKKDFTSIIVVHT 187
PK+L+T+ R R L + PN+ Y RGT + + +I +A + +T ++V
Sbjct: 215 PKLLLTSTR--RARQHQLYQTLSLIFPNTTYVPRGTKFTIPQIASFATNRQYTHLLVALE 272
Query: 188 NRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGR 247
+ + L+II LP GPT HF L+ K I+ G T H+PEL+LNNF T +G
Sbjct: 273 DSKTLHGLIIILLPAGPTFHFSLTNFADGKAIQGRGVNTNHVPELILNNFTTTIGRLTAS 332
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFC 307
L QSL+P P+F GR+VVT HNQRD+IFFR HR
Sbjct: 333 LFQSLYPPQPQFMGRQVVTLHNQRDYIFFRFHR--------------------------- 365
Query: 308 YYECRYIFETKE--SKGSDANGKKAKDAKSEKTSQQKVI-TRLQECGPRFTLKLVSLQHG 364
Y R I E + S+G G A ++ + I LQE GP+FTLKL ++ G
Sbjct: 366 -YIFREIAEKNKGISRGDRTTGAAAVGVGGQRAGEDLGIKVGLQELGPQFTLKLRRVERG 424
Query: 365 TFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ G E+EW K +M+ R+ F L
Sbjct: 425 ICE--GIEWEW--KGKMEKDRKMFHL 446
>gi|326481314|gb|EGE05324.1| RNA processing factor 1 [Trichophyton equinum CBS 127.97]
Length = 432
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 145/314 (46%), Gaps = 55/314 (17%)
Query: 88 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAP--KILITTCRFNSNRGPA 145
P E P ++ R + +L A +F S+ P KILITT ++ A
Sbjct: 163 VPSATERATSPTQS-TRSTNIDLAPDALAAKFPSLFPTEAPPPPKILITTSLNSTLHKEA 221
Query: 146 FISELLSVIPNSHYYKRGTYDL------KKIIEYAKKKDFTSIIVVHTNRREPDALLIIG 199
+ L PNS Y + D+ ++I +A +++T+++V+ + + L I+
Sbjct: 222 KV--LTEFFPNSVYIRARRIDMAHKFSVREISSFAANRNYTAVVVLEEDLKRVSGLTIVH 279
Query: 200 LPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEF 259
LP GPT HF +S + K + HGNPT H PEL+LNNF T LG L ++LFP PE
Sbjct: 280 LPVGPTFHFSISNWIEGKKLPGHGNPTSHWPELILNNFRTPLGLLTAHLFRTLFPPQPEL 339
Query: 260 RGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETK- 318
+GR+VVT HNQRD+IF R H RY+F K
Sbjct: 340 QGRQVVTLHNQRDYIFVRRH--------------------------------RYVFRDKR 367
Query: 319 --ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV 376
E DANG + K + + LQE GPRFTLKL + G G ++EW
Sbjct: 368 ETEKCVVDANGVEMKGVEGIRAG-------LQELGPRFTLKLRRIDKGIQRKSGQDWEW- 419
Query: 377 HKPEMDTSRRRFFL 390
K M+ R +F L
Sbjct: 420 -KGRMEKVRTKFQL 432
>gi|169612059|ref|XP_001799447.1| hypothetical protein SNOG_09145 [Phaeosphaeria nodorum SN15]
gi|111062217|gb|EAT83337.1| hypothetical protein SNOG_09145 [Phaeosphaeria nodorum SN15]
Length = 425
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 129/278 (46%), Gaps = 48/278 (17%)
Query: 119 FSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIE 172
F + PKIL+TT ++ A I L S+ PNS Y +R Y +++I +
Sbjct: 186 FPQLFDPQPEPKILVTTSINSTLHAEADI--LTSLFPNSTYIRRSANFHAHKYSVREIAK 243
Query: 173 YAKKKDFTSIIVVHTNRRE--PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIP 230
+A +++T+++V+ E PD L II LP+GP HF ++ + K + H N TGH P
Sbjct: 244 FAANREYTALVVLMQAEHEKKPDGLDIIHLPNGPHFHFSVTNWIEGKKLPRHANDTGHYP 303
Query: 231 ELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCY 290
EL+LNNF T LG L + LFP +PE GR+V+T HNQRD+IF R H
Sbjct: 304 ELILNNFKTPLGILTAHLFKGLFPAAPELEGRQVLTLHNQRDYIFVRRH----------- 352
Query: 291 MWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQEC 350
RY+F K G K K + V +QE
Sbjct: 353 ---------------------RYVFRDKRETEKPITGNDGKPIK----GVEDVKVGMQEI 387
Query: 351 GPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 388
GPR TLKL + G E+EW K M+ R RF
Sbjct: 388 GPRMTLKLRRIDREVQFKSGQEWEW--KGRMEKKRTRF 423
>gi|398393230|ref|XP_003850074.1| hypothetical protein MYCGRDRAFT_110502 [Zymoseptoria tritici
IPO323]
gi|339469952|gb|EGP85050.1| hypothetical protein MYCGRDRAFT_110502 [Zymoseptoria tritici
IPO323]
Length = 420
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 129/270 (47%), Gaps = 48/270 (17%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKD--FT 180
PK+LITT ++ A + L + PNS+Y +R Y +++I YA +D +T
Sbjct: 191 PKVLITTSINSTLHNEAEL--LTQLFPNSNYIRRTAHFHSYKYSVREIAAYASSEDAGYT 248
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 240
+++++ + ++P + I+ LP GP HF +S + I HGNPT H PEL+LN F T
Sbjct: 249 HLVILNEDLKKPKGIDIVHLPTGPMFHFSISNWIPGARIPGHGNPTNHYPELILNGFRTP 308
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLT 300
LG L +SLFP PE +GR+VVT HNQRD+IF R H
Sbjct: 309 LGVVTAHLFKSLFPPHPEIQGRQVVTLHNQRDYIFMRRH--------------------- 347
Query: 301 SIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 360
RY+F K+ G K K + + LQE GPRFT+KL
Sbjct: 348 -----------RYVFRDKKGTEKSIQGTDGKLMK----GVEDIRAGLQELGPRFTMKLRR 392
Query: 361 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ G G E+EW K + R RF L
Sbjct: 393 VDKGIQRASGQEWEW--KAHDEKVRTRFSL 420
>gi|332029526|gb|EGI69415.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Acromyrmex
echinatior]
Length = 312
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 160/348 (45%), Gaps = 87/348 (25%)
Query: 45 EKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCR 104
E+ +H L+ + + ++K++ DA + A+ +G E TV
Sbjct: 37 EENIPIHPDLR-KSALHVQRKIEWEDAGPEMAVAMGTEMGG---------------TVVN 80
Query: 105 PDDDEL-FAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG 163
+DDE +AG + PKI+ITT R S+R F+ EL + PNS RG
Sbjct: 81 HEDDEYRWAGVEN------------PKIVITTSRDPSSRLKMFVKELRLIFPNSQRMNRG 128
Query: 164 TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG 223
Y++K++I + D T I+VH +R PDAL+I LP GPTA+F LS +V+R DI + G
Sbjct: 129 NYEMKQLIHACRANDVTDFIIVHEHRGVPDALVICHLPYGPTAYFTLSGVVMRHDIPDIG 188
Query: 224 NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVP 283
+ P L+ +NF T+LG RV +++ LFP P+ +RV++F N D+I
Sbjct: 189 TMSEQYPHLIFHNFKTKLGVRVTNILKYLFP-VPKEDSKRVISFANHDDYI--------- 238
Query: 284 LEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKV 343
C+ Y K +Q K
Sbjct: 239 -----------------------CFRHHTY-----------------------KKTQGKN 252
Query: 344 ITRLQECGPRFTLKLVSLQHGTFDTK-GGEFEWVHKPEMDTSRRRFFL 390
I L E GPRF +KL ++ GT DT+ + EW +P M+TS +R FL
Sbjct: 253 I-ELTEVGPRFQMKLYEIKLGTLDTESAADTEWALRPYMNTSHKRRFL 299
>gi|268637941|ref|XP_002649153.1| U3 small nucleolar ribonucleoprotein protein [Dictyostelium
discoideum AX4]
gi|256012946|gb|EEU04101.1| U3 small nucleolar ribonucleoprotein protein [Dictyostelium
discoideum AX4]
Length = 286
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 126/262 (48%), Gaps = 57/262 (21%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+L+TT R S+R F EL + PNS RG + +K++++ + D T +++ H +
Sbjct: 82 PKVLVTTSREPSSRLIQFTKELRMLFPNSQKMNRGAHVVKELVDACRANDVTDLVIAHEH 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R EP L+I LP GPTA+F++ V+ DI P+ P L+ +NF T LG R +
Sbjct: 142 RGEPVGLVISHLPYGPTAYFEIKNCVMIHDIDEATPPSLAFPHLIFHNFTTPLGERTENI 201
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCY 308
++ LFP P+ RRVVTF N DFI FRHH
Sbjct: 202 LKYLFP-VPKDDSRRVVTFSNDNDFISFRHH----------------------------- 231
Query: 309 YECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT 368
I+E K + VI L+E GPRF LKL +Q GT D
Sbjct: 232 -----IYE--------------------KDGYKNVI--LKEIGPRFELKLYKIQLGTLDQ 264
Query: 369 KGGEFEWVHKPEMDTSRRRFFL 390
+ EWV+KP M++++ R FL
Sbjct: 265 DEADLEWVYKPYMNSTKNRLFL 286
>gi|225449863|ref|XP_002265279.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Vitis
vinifera]
gi|147790699|emb|CAN61017.1| hypothetical protein VITISV_041221 [Vitis vinifera]
gi|296081284|emb|CBI17728.3| unnamed protein product [Vitis vinifera]
Length = 293
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 137/277 (49%), Gaps = 61/277 (22%)
Query: 117 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
DE+++ ++ PKIL+TT R S F+ EL V PN+ RG + +IIE +
Sbjct: 73 DEYANATEKD--PKILLTTSRNPSAPLTQFVKELKFVFPNAQRMNRGGQVISEIIETCRA 130
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELV 233
DFT +++VH +R PD ++I LP GPTA+F L +V R DIK+ G + P L+
Sbjct: 131 HDFTDVVLVHEHRGVPDGIIISHLPFGPTAYFGLLNVVTRHDIKDKKAIGKMSEAYPHLI 190
Query: 234 LNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWT 293
LNNF+T+LG R +++ LFP P+ +R++TF NQ D++ FRHH
Sbjct: 191 LNNFSTKLGERTANILKHLFP-VPKPDTKRIITFANQSDYVSFRHH-------------- 235
Query: 294 ILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPR 353
YE R G K+ + K E GPR
Sbjct: 236 --------------VYEKR-------------GGPKSIELK--------------EVGPR 254
Query: 354 FTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
F L+L ++ GT D + EWV +P M+T+++R FL
Sbjct: 255 FELRLYQIKLGTMDQSEAQIEWVIRPYMNTTKKRKFL 291
>gi|145253827|ref|XP_001398426.1| RNA processing factor 1 [Aspergillus niger CBS 513.88]
gi|134083999|emb|CAK49154.1| unnamed protein product [Aspergillus niger]
Length = 443
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 143/271 (52%), Gaps = 50/271 (18%)
Query: 128 APKILITTCRFNSNRGPAFISELLS-VIPNSHYYKRG------TYDLKKIIEYAKKKDFT 180
+PKILITT N + +ELL+ + PNS Y +R + +++I ++A ++FT
Sbjct: 215 SPKILITTS---LNSSLHYEAELLTDLFPNSVYVRRTRHRFAHQFSIREISKFATNRNFT 271
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 240
+++++ ++++P L I+ LP GP HF ++ V K I HG T H PEL+LNNF T
Sbjct: 272 AVVILREDQKKPAGLDIVHLPTGPMFHFSMTNWVEGKRIPGHGRATEHWPELILNNFRTP 331
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLT 300
LG L ++LFP P+ GR+VVT N RD++FFR HR
Sbjct: 332 LGLLTAHLFRTLFPPQPDIEGRQVVTVLNSRDYLFFRRHR-------------------- 371
Query: 301 SIMKAFCYYECRYIFETKES-KGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 359
+ + E R ET+++ GSD GK+ K A+ + +QE GPRFTLKL
Sbjct: 372 -----YVFREKR---ETEKAVVGSD--GKEMKGAEGIRAG-------MQELGPRFTLKLR 414
Query: 360 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ G G E+EW K +M+ +R +F L
Sbjct: 415 RVDKGIQRASGQEWEW--KGQMEKTRTKFQL 443
>gi|403223058|dbj|BAM41189.1| RNA processing factor [Theileria orientalis strain Shintoku]
Length = 180
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 120/236 (50%), Gaps = 68/236 (28%)
Query: 167 LKKIIEYAKKKDFTSIIVV-HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP 225
+K+++++A K DFTSI++V + + P+ L I LP+GPT FKL+ + ++K G
Sbjct: 1 MKEVVKFAIKNDFTSILLVTEGSNKMPNGLFICSLPEGPTTFFKLTSIKFASEMKGGGVL 60
Query: 226 TGHIPELVLNNFATRLGHRVGRLIQSLFP-----------QSPEFRGRRVVTFHNQRDFI 274
PE+VLN+F TRLG R+GR I SLF QSPEF GRRV+TFHNQRD I
Sbjct: 61 VATKPEIVLNSFNTRLGRRIGRQIASLFSLVSGQQITNAYQSPEFEGRRVITFHNQRDMI 120
Query: 275 FFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAK 334
FFRHH RY+F +
Sbjct: 121 FFRHH--------------------------------RYVF------------------R 130
Query: 335 SEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+EK K I GPRFT+K+ +Q G FD GG +E++ +P++ R+RFF+
Sbjct: 131 NEKKCSLKEI------GPRFTMKVYYVQDGLFDLDGGLYEFIWRPDLQVDRKRFFI 180
>gi|119498571|ref|XP_001266043.1| RNA processing factor 1 [Neosartorya fischeri NRRL 181]
gi|119414207|gb|EAW24146.1| RNA processing factor 1 [Neosartorya fischeri NRRL 181]
Length = 444
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 127/268 (47%), Gaps = 46/268 (17%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKILITT ++ A L ++ PNS Y +R + +++I +A +++T++
Sbjct: 217 PKILITTSLNSTLHNEA--KSLTNLFPNSVYIRRTAHHHSHKFSIREIASFASNRNYTTV 274
Query: 183 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 242
+V+ +++ P L I+ LP GPT HF +S+ + K + HGN T H PEL+LNNF T LG
Sbjct: 275 VVLQEDQKRPSGLTIVHLPQGPTFHFTISRWIEGKKLPGHGNATEHWPELILNNFRTPLG 334
Query: 243 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSI 302
L +S+FP P+ GR+VVT HNQRD++F R H
Sbjct: 335 LLTAHLFRSMFPPQPDLEGRQVVTIHNQRDYLFLRRH----------------------- 371
Query: 303 MKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQ 362
RY+F K G K+ K + + LQE GP KL +
Sbjct: 372 ---------RYVFREKRETEKSVVGTDGKEIK----GVEGIRAGLQELGPAINFKLRRVD 418
Query: 363 HGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
G G E+EW K M+ R +F L
Sbjct: 419 KGIQRASGQEWEW--KGGMEKQRTKFQL 444
>gi|168061575|ref|XP_001782763.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665736|gb|EDQ52410.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 291
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 130/265 (49%), Gaps = 59/265 (22%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKIL+TT R S+R F+ EL V PN+ RG + +I+E + ++++ +I+VH +
Sbjct: 83 PKILLTTSRDPSSRLTQFVKELKIVFPNAQRINRGGQVISEIVESCRAQEYSDLIMVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELVLNNFATRLGHRV 245
R EPD L++ LP GPTA+F LS +V R DIK+ G + P L+ NNF T+LG R
Sbjct: 143 RGEPDGLIVCHLPYGPTAYFGLSNVVTRHDIKDKGVLGTMSEQYPHLIFNNFNTKLGQRT 202
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKA 305
+++ LFP P+ +R++TF NQ D+I FRHH
Sbjct: 203 VNILKHLFP-VPKPDAKRIITFANQSDYISFRHH-------------------------- 235
Query: 306 FCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT 365
YE G K+ D K E GPRF L+L ++ GT
Sbjct: 236 --MYE-------------KPAGVKSIDIK--------------EVGPRFELRLYQVKLGT 266
Query: 366 FDTKGGEFEWVHKPEMDTSRRRFFL 390
D + EWV +P M++ ++R L
Sbjct: 267 MDQTEAQNEWVIRPYMNSGKKRIAL 291
>gi|358373297|dbj|GAA89896.1| RNA processing factor 1 [Aspergillus kawachii IFO 4308]
Length = 450
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 138/273 (50%), Gaps = 54/273 (19%)
Query: 128 APKILITTCRFNSNRGPAFISELLS-VIPNSHYYKRG------TYDLKKIIEYAKKKDFT 180
+PKILITT +S A ELL+ + PNS Y +R + +++I ++A ++FT
Sbjct: 222 SPKILITTSLNSSLHHEA---ELLTDLFPNSVYVRRTRHRFAHQFSIREISKFATNRNFT 278
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 240
+++++ ++++P L I+ LP GP HF ++ V K I HG T H PEL+LNNF T
Sbjct: 279 AVVILREDQKKPTGLDIVHLPTGPMFHFSMTNWVEGKRIPGHGRATDHWPELILNNFRTP 338
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLT 300
LG L ++LFP P+ GR+VVT N RD++FFR H
Sbjct: 339 LGLLTAHLFRTLFPPQPDIEGRQVVTVLNSRDYLFFRRH--------------------- 377
Query: 301 SIMKAFCYYECRYIFETK---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 357
RY+F K E A+GK+ K A+ + +QE GPRFTLK
Sbjct: 378 -----------RYVFREKRETEKAVVGADGKEMKGAEGIRAG-------MQELGPRFTLK 419
Query: 358 LVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L + G G E+EW K +M+ +R +F L
Sbjct: 420 LRRVDKGIQRASGQEWEW--KGQMEKTRTKFQL 450
>gi|159126227|gb|EDP51343.1| RNA processing factor 1 [Aspergillus fumigatus A1163]
Length = 425
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 126/268 (47%), Gaps = 46/268 (17%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKILITT ++ A L + PNS Y +R + +++I +A +++TS+
Sbjct: 198 PKILITTSLNSTLHNEA--RSLTDLFPNSVYIRRTAHRYSHKFSIREIAAFASNRNYTSV 255
Query: 183 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 242
+V+ +++ P L I+ LP GPT HF +S+ + K + HGN T H PEL+LNNF T LG
Sbjct: 256 VVLQEDQKRPSGLTIVHLPQGPTFHFTISRWIEGKKLPGHGNATEHRPELILNNFRTPLG 315
Query: 243 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSI 302
L +S+FP P+ GR+VVT HNQRD++F R H
Sbjct: 316 LLTAHLFRSMFPPQPDLEGRQVVTIHNQRDYLFLRRH----------------------- 352
Query: 303 MKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQ 362
RY+F K G K+ K + + LQE GP KL +
Sbjct: 353 ---------RYVFREKRETEKSVVGTDGKEIK----GVEGIRAGLQELGPAINFKLRRVD 399
Query: 363 HGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
G G E+EW K M+ R +F L
Sbjct: 400 KGIQRASGQEWEW--KGGMEKQRTKFQL 425
>gi|70998634|ref|XP_754039.1| RNA processing factor 1 [Aspergillus fumigatus Af293]
gi|66851675|gb|EAL92001.1| RNA processing factor 1 [Aspergillus fumigatus Af293]
Length = 425
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 126/268 (47%), Gaps = 46/268 (17%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKILITT ++ A L + PNS Y +R + +++I +A +++TS+
Sbjct: 198 PKILITTSLNSTLHNEA--RSLTDLFPNSVYIRRTAHRYSHKFSIREIAAFASNRNYTSV 255
Query: 183 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 242
+V+ +++ P L I+ LP GPT HF +S+ + K + HGN T H PEL+LNNF T LG
Sbjct: 256 VVLQEDQKRPSGLTIVHLPQGPTFHFTISRWIEGKKLPGHGNATEHRPELILNNFRTPLG 315
Query: 243 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSI 302
L +S+FP P+ GR+VVT HNQRD++F R H
Sbjct: 316 LLTAHLFRSMFPPQPDLEGRQVVTIHNQRDYLFLRRH----------------------- 352
Query: 303 MKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQ 362
RY+F K G K+ K + + LQE GP KL +
Sbjct: 353 ---------RYVFREKRETEKSVVGTDGKEIK----GVEGIRAGLQELGPAINFKLRRVD 399
Query: 363 HGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
G G E+EW K M+ R +F L
Sbjct: 400 KGIQRASGQEWEW--KGGMEKQRTKFQL 425
>gi|297837007|ref|XP_002886385.1| hypothetical protein ARALYDRAFT_893060 [Arabidopsis lyrata subsp.
lyrata]
gi|297332226|gb|EFH62644.1| hypothetical protein ARALYDRAFT_893060 [Arabidopsis lyrata subsp.
lyrata]
Length = 294
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 135/287 (47%), Gaps = 69/287 (24%)
Query: 107 DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD 166
DDE +AD PKIL+TT R S F EL V PNS RG
Sbjct: 72 DDEYANATEAD-----------PKILLTTSRNPSAPLIRFTKELKFVFPNSQRINRGGQV 120
Query: 167 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI---KNHG 223
+ +IIE A+ DFT +I+VH +R PD L+I LP GPTA+F L +V R DI K G
Sbjct: 121 ISEIIETARSHDFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHDISDKKAIG 180
Query: 224 NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVP 283
P L+ NNF T++G RV +++ +FP +P+ RR+VTF NQ D+I FR+H
Sbjct: 181 KMPEQYPHLIFNNFTTQMGQRVANILKHIFP-APKLDARRIVTFANQSDYISFRNH---- 235
Query: 284 LEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKV 343
+++ E G K+ + K
Sbjct: 236 ------------------------------VYDKGEG------GPKSIELK--------- 250
Query: 344 ITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
E GPRF L+L ++ GT + E EWV +P M+T+++R F+
Sbjct: 251 -----EIGPRFELRLYQVKLGTVEQNEAEIEWVIRPYMNTAKKRQFI 292
>gi|320593554|gb|EFX05963.1| RNA processing factor 1 [Grosmannia clavigera kw1407]
Length = 400
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 135/282 (47%), Gaps = 49/282 (17%)
Query: 105 PDDDELFAGNDA--DEFSSILKQGCA--PKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
P +E A DA +++ +LK+ P+ILITT R + + L+ + PNS Y
Sbjct: 144 PTAEEKAARQDAMAAKYAELLKEPAPAEPRILITTSRHATIH--KYAHTLVDLFPNSTYI 201
Query: 161 KRGT-------YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKL 213
R Y +++I YA + +T++++V+ + ++ L I LP GP HF +
Sbjct: 202 PRSGHRFVHHEYSIREIAGYATNRGYTALMIVNEDLKKASGLDIALLPHGPMLHFSIQTW 261
Query: 214 VLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 273
V K + NHG TGH PE+++NNF T LG VG ++ LFP +P+ GR+VVT HNQRD+
Sbjct: 262 VDAKFLPNHGRSTGHSPEMIMNNFDTSLGKLVGGVLGRLFPPNPDLVGRQVVTLHNQRDY 321
Query: 274 IFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDA 333
+F R HR Y R T+ S +D NGK
Sbjct: 322 VFVRRHR----------------------------YAVRDKRATERSV-ADKNGKTMAGV 352
Query: 334 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 375
+ K + LQE GPR TLKL + G G FEW
Sbjct: 353 EDVKVA-------LQEIGPRMTLKLRRVDKGLQRMSGQAFEW 387
>gi|350634077|gb|EHA22441.1| hypothetical protein ASPNIDRAFT_45208 [Aspergillus niger ATCC 1015]
Length = 443
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 139/270 (51%), Gaps = 48/270 (17%)
Query: 128 APKILITTCRFNSNRGPAFISELLS-VIPNSHYYKRG------TYDLKKIIEYAKKKDFT 180
+PKILITT +S A ELL+ + PNS Y +R + +++I ++A ++FT
Sbjct: 215 SPKILITTSLNSSLHHEA---ELLTDLFPNSVYVRRTRHRFAHQFSIREISKFATNRNFT 271
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 240
+++++ ++++P L I+ LP GP HF ++ V K I HG T H PEL+LNNF T
Sbjct: 272 AVVILREDQKKPAGLDIVHLPTGPMFHFSMTNWVEGKRIPGHGRATEHWPELILNNFRTP 331
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLT 300
LG L ++LFP P+ GR+VVT N RD++FFR HR
Sbjct: 332 LGLLTAHLFRTLFPPQPDIEGRQVVTVLNSRDYLFFRRHR-------------------- 371
Query: 301 SIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 360
+ + E R K GSD GK+ K A+ + +QE GPRFTLKL
Sbjct: 372 -----YVFREKRET--EKAVVGSD--GKEMKGAEGIRAG-------MQELGPRFTLKLRR 415
Query: 361 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ G G E+EW K +M+ +R +F L
Sbjct: 416 VDKGIQRASGQEWEW--KGQMEKTRTKFQL 443
>gi|310789481|gb|EFQ25014.1| brix domain-containing protein [Glomerella graminicola M1.001]
Length = 423
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 140/287 (48%), Gaps = 51/287 (17%)
Query: 116 ADEFSSILKQGCAP--KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDL 167
A +F S+ + P KILITT ++ A + ++ PNS Y R Y L
Sbjct: 176 ALKFPSLFTEDAPPPPKILITTSLNSTLHYEANV--FRTIFPNSTYVPRSAHRYGHKYSL 233
Query: 168 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG 227
++I ++A +D+T+++++ ++++ + I+ LP GPT F ++ + K + HGNPT
Sbjct: 234 REISKFASNRDYTAVVLLKEDQKKLTGMSIVHLPAGPTFTFSITNFMEGKKLPGHGNPTN 293
Query: 228 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFI 287
H PEL+LNNF T LG L Q LFP PE GR+V+T HNQRD++FFR H
Sbjct: 294 HYPELLLNNFKTPLGLLTAALFQRLFPPQPELEGRQVLTVHNQRDYLFFRRH-------- 345
Query: 288 SCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRL 347
RY+F +E + ++ N A A E + + L
Sbjct: 346 ------------------------RYVF--REKRETEKNITTADGA--EMKGVEGIRVGL 377
Query: 348 QECGPRFTLKLVSLQHGTFDTKGGEFE----WVHKPEMDTSRRRFFL 390
QE GPRFT KL + G G E E W K +M+ R+RF L
Sbjct: 378 QEVGPRFTAKLRRVDKG-IGRAGSEGEDSQPWEWKAKMEKDRKRFNL 423
>gi|453083784|gb|EMF11829.1| Brix-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 433
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 130/273 (47%), Gaps = 54/273 (19%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKD--FT 180
PK+LITT ++ + L + PNS Y KR Y +++I YA D +T
Sbjct: 204 PKVLITTSINSTLHHEGQL--LTGLFPNSKYIKRTAHFHAYKYSIREICSYASDPDRGYT 261
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 240
+++++ +++ P + I+ LP GP HF +SK + + HGNPT H PEL+LN F T
Sbjct: 262 HVVILNEDQKRPKGIDIVHLPHGPMFHFSISKWIPGNKLPGHGNPTNHYPELILNGFRTP 321
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLT 300
LG L +SLFP PE +GR+V+T HNQRD+IF R H
Sbjct: 322 LGLLTAHLFKSLFPPRPEIQGRQVLTLHNQRDYIFLRRH--------------------- 360
Query: 301 SIMKAFCYYECRYIFETK---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 357
RY+F K E A+GK K A + + LQE GPRFT+K
Sbjct: 361 -----------RYVFRDKRGTEKPIQGADGKPMKGA-------EDIRVGLQELGPRFTMK 402
Query: 358 LVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L + G G E++W K + R RF L
Sbjct: 403 LRRVDKGIQKASGQEWQW--KAGDEKVRTRFSL 433
>gi|380491186|emb|CCF35498.1| brix domain-containing protein [Colletotrichum higginsianum]
Length = 421
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 141/287 (49%), Gaps = 51/287 (17%)
Query: 116 ADEFSSILKQGCAP--KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDL 167
A +F S+ + P KILITT ++ A I ++ PNS Y R Y L
Sbjct: 174 ALKFPSLFTEDAPPPPKILITTSLNSTLHYEANI--FRTIFPNSTYVPRSAHRYGHKYSL 231
Query: 168 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG 227
++I ++A +D+T+++++ ++++ + I+ LP GPT F ++ + K + HGNPT
Sbjct: 232 REISKFASNRDYTAVVLLKEDQKKLTGMSIVHLPTGPTFTFSITNFMEGKKLPGHGNPTN 291
Query: 228 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFI 287
H PEL+LNNF T LG L Q LFP PE GR+V+T HNQRD++FFR H
Sbjct: 292 HYPELLLNNFKTPLGLLTAALFQRLFPPQPELEGRQVLTVHNQRDYLFFRRH-------- 343
Query: 288 SCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRL 347
RY+F +E + ++ N A+ A E + + L
Sbjct: 344 ------------------------RYVF--REKRETEKNITTAEGA--EMKGVEGIRVGL 375
Query: 348 QECGPRFTLKLVSLQHGTFDTKGGEFE----WVHKPEMDTSRRRFFL 390
QE GPRFT KL + G G E + W K +M+ R+RF L
Sbjct: 376 QEVGPRFTAKLRRVDKG-IGRAGSEGDDSQPWEWKAKMEKDRKRFNL 421
>gi|452982063|gb|EME81822.1| hypothetical protein MYCFIDRAFT_32566 [Pseudocercospora fijiensis
CIRAD86]
Length = 420
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 129/270 (47%), Gaps = 48/270 (17%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKD--FT 180
PK+L+TT ++ A + L ++ PNS Y +R Y +++I +YA +D +T
Sbjct: 191 PKVLVTTSINSTLHTEAQL--LTTLFPNSKYIRRTAHAHAYKYSVREICKYASDEDRGYT 248
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 240
+++++ + + P + I+ LP+GP HF +S + HGNPT H PEL+LN F T
Sbjct: 249 HVVILNEDLKRPKGIDIVHLPEGPMFHFSISNWTPGSKLPGHGNPTNHYPELILNGFRTP 308
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLT 300
LG L +SLFPQ PE GR+VVT HNQRD+IF R H
Sbjct: 309 LGLLAAHLFKSLFPQRPELVGRQVVTLHNQRDYIFLRRH--------------------- 347
Query: 301 SIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 360
RY+F K+S G K + + LQE GPRFT+KL
Sbjct: 348 -----------RYVFRDKKSTEKSIQGADGKKVD----GVEDIRVGLQELGPRFTMKLRR 392
Query: 361 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ G G E++W K + R RF L
Sbjct: 393 VDKGIQFASGQEWKW--KAGDEKVRTRFSL 420
>gi|363808124|ref|NP_001242221.1| uncharacterized protein LOC100814677 [Glycine max]
gi|255634440|gb|ACU17585.1| unknown [Glycine max]
Length = 293
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 159/350 (45%), Gaps = 89/350 (25%)
Query: 45 EKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCR 104
EK+ + L+ K + +L+ +AA +RA++L +E NT P +
Sbjct: 27 EKKRKIREALQEGKPIPT--ELRNEEAALRRAIDLEDE-----------NTAVPRTHI-- 71
Query: 105 PDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 164
DDE + D PKIL+TT R S F+ EL V PN+ RG
Sbjct: 72 --DDEYAYAAEKD-----------PKILLTTSRDPSAPLQQFVKELSFVFPNAQRMNRGG 118
Query: 165 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 224
+ +IIE + D+T +++VH +R PD L++ LP GPTA+F L +V R +IK+
Sbjct: 119 QVISEIIESCRAHDYTDVVLVHEHRGVPDGLIVCHLPFGPTAYFGLLNVVTRHEIKDK-K 177
Query: 225 PTGHIPE----LVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHR 280
G IPE L+LNNF+T+LG R +++ LFP P+ +R+V F NQ +I FRHH
Sbjct: 178 AIGTIPEAYPHLILNNFSTKLGDRTANIMKHLFP-VPKLDTKRIVMFANQSGYISFRHH- 235
Query: 281 CVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQ 340
I+E S S
Sbjct: 236 ---------------------------------IYEKNGSPKS----------------- 245
Query: 341 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L+E GPRF L+L ++ GT D + EW+ +P M+T+++R FL
Sbjct: 246 ----IELKEIGPRFELRLYQIKLGTVDQAEAQIEWIIRPYMNTTKKRKFL 291
>gi|115438426|ref|XP_001218063.1| ribosome production factor 1 [Aspergillus terreus NIH2624]
gi|114188878|gb|EAU30578.1| ribosome production factor 1 [Aspergillus terreus NIH2624]
Length = 431
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 133/272 (48%), Gaps = 52/272 (19%)
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 181
+PKILITT ++ A L PNS Y +R + +++I ++A +++T+
Sbjct: 203 SPKILITTGLNSTLHHEA--EALTDFFPNSIYVRRTAHRFSHKFSVREISKFAANREYTA 260
Query: 182 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 241
+++++ +++ + I+ LP GP HF +S V K I HG T H PEL+LNNF T L
Sbjct: 261 VVILNEDQKRVSGMDIVHLPSGPMFHFSISNWVDGKRIPGHGRSTAHWPELILNNFRTPL 320
Query: 242 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTS 301
G RL Q+LFP P+ GR+VVT HNQRD++F R H
Sbjct: 321 GLLTARLFQTLFPPQPDLEGRQVVTVHNQRDYLFVRRH---------------------- 358
Query: 302 IMKAFCYYECRYIFETK---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 358
RY+F K E A+GK+ K A+ + S QE GPRFTLKL
Sbjct: 359 ----------RYVFREKRETEKPVVGADGKEMKGAEGIRVS-------TQELGPRFTLKL 401
Query: 359 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ G G E++W K ++ R +F L
Sbjct: 402 RRVDKGIQHASGQEWQW--KAGLEKQRTKFQL 431
>gi|396494583|ref|XP_003844339.1| similar to RNA processing factor 1 [Leptosphaeria maculans JN3]
gi|312220919|emb|CBY00860.1| similar to RNA processing factor 1 [Leptosphaeria maculans JN3]
Length = 445
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 129/278 (46%), Gaps = 48/278 (17%)
Query: 119 FSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIE 172
F + PKILITT ++ A I L S+ PNS Y +R Y +++I +
Sbjct: 206 FPQLFNTQPEPKILITTSINSTLHKEADI--LTSLFPNSTYIRRTANFHAHKYSVREIAQ 263
Query: 173 YAKKKDFTSIIVVHTNRRE--PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIP 230
+A +D+T+++V+ + E D L +I LP+GP HF ++ + K + H TGH P
Sbjct: 264 FASARDYTALVVLMQAQHEKKADGLDVIHLPNGPHFHFSVTNWIEGKKLPRHATDTGHYP 323
Query: 231 ELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCY 290
EL+LNNF T LG +L + LFP PE +GR+V+T HNQRD+IF R H
Sbjct: 324 ELILNNFKTPLGVLTAQLFKGLFPADPELQGRQVLTLHNQRDYIFVRRH----------- 372
Query: 291 MWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQEC 350
RY+F K G K + + +QE
Sbjct: 373 ---------------------RYVFRDKRESEKSILGNDGKPM----PGVEDIKVGMQEI 407
Query: 351 GPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 388
GPR TLKL + G G E+EW K M+ R RF
Sbjct: 408 GPRMTLKLRRVDRGIQFKSGQEWEW--KGRMEKQRTRF 443
>gi|451854175|gb|EMD67468.1| hypothetical protein COCSADRAFT_179126 [Cochliobolus sativus
ND90Pr]
Length = 433
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 127/268 (47%), Gaps = 48/268 (17%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKIL+TT +S A + L S+ PNS Y +R Y +++I +A + +T++
Sbjct: 204 PKILVTTSINSSLHKEADV--LTSIFPNSTYIRRTKHAHAHKYSVREIASFAAARGYTAL 261
Query: 183 IVVHTNRRE--PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 240
+++ + E PD L I+ LP+GP HF +S V K + H N TGH PEL+LN+F T
Sbjct: 262 VILMQAQHEKKPDGLDIVNLPNGPHFHFSVSNWVDGKKLPRHANDTGHYPELILNHFKTP 321
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLT 300
LG +L ++LFP PE GR+V+T HNQRD+IF R H
Sbjct: 322 LGVLTAQLFKNLFPPFPELEGRQVLTLHNQRDYIFVRRH--------------------- 360
Query: 301 SIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 360
RY+F K G K + V +QE GPR TLKL
Sbjct: 361 -----------RYVFRDKRETEKPVLGTDGKPI----PGAEDVKVGMQEIGPRMTLKLRR 405
Query: 361 LQHGTFDTKGGEFEWVHKPEMDTSRRRF 388
+ G G E++W K MD R RF
Sbjct: 406 IDRGIQFKSGQEWQW--KGRMDKQRTRF 431
>gi|321472011|gb|EFX82982.1| hypothetical protein DAPPUDRAFT_100904 [Daphnia pulex]
Length = 309
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 127/263 (48%), Gaps = 57/263 (21%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT S+R F+ EL V PNS RG Y++K++++ + T IVVH +
Sbjct: 95 PKIMITTSHDPSSRLKMFVKELKLVFPNSQRLNRGNYEMKQLLDACRANSVTDFIVVHEH 154
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R +P+A++I LP GPTA+F +S +V+R DI + G + P LV +N T LG RV +
Sbjct: 155 RGQPNAIIISHLPYGPTAYFNVSDVVMRHDIPDIGPMSEQYPHLVFHNMKTPLGQRVMNI 214
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCY 308
++ LFP P+ +RV+TF N DFI +RHH
Sbjct: 215 LKYLFP-VPKEDSKRVITFANHDDFISYRHHTY--------------------------- 246
Query: 309 YECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD- 367
KG G + K+ GPRF L+L L+ GT D
Sbjct: 247 -----------KKGEAGKGIELKE-----------------VGPRFQLRLYDLKLGTIDQ 278
Query: 368 TKGGEFEWVHKPEMDTSRRRFFL 390
+ EW ++P M+T+++R FL
Sbjct: 279 ADAADTEWAYRPYMNTTKKRRFL 301
>gi|303288804|ref|XP_003063690.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454758|gb|EEH52063.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 289
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 127/263 (48%), Gaps = 62/263 (23%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+L+TT R S+R F+ E+ ++P + RG L ++E + DFT +++VH +
Sbjct: 83 PKVLVTTSRDPSSRLTQFVKEVKLLMPTAQRVNRGAQVLPDLVELCRSNDFTDLVMVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI----PELVLNNFATRLGHR 244
R EPD L++ +P GPTA+F LS V+R DIK+ GH+ P L+L NF T LG R
Sbjct: 143 RGEPDGLVVSHMPFGPTAYFGLSGTVMRHDIKDED--IGHVSEVNPHLILENFNTTLGQR 200
Query: 245 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMK 304
V +++ LFP +P + +RV+TF NQ D+I RHH
Sbjct: 201 VKTILRHLFP-APRTKSKRVITFANQNDYISMRHH------------------------- 234
Query: 305 AFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 364
YE + KD+ S L E GPRF +KL ++ G
Sbjct: 235 ---TYEM----------------PRGKDSVS-----------LTEIGPRFEMKLYQIKLG 264
Query: 365 TFDTKGGEFEWVHKPEMDTSRRR 387
T D + EW +P M + ++R
Sbjct: 265 TIDADDADVEWALRPFMRSGKKR 287
>gi|242794850|ref|XP_002482460.1| RNA processing factor 1 [Talaromyces stipitatus ATCC 10500]
gi|218719048|gb|EED18468.1| RNA processing factor 1 [Talaromyces stipitatus ATCC 10500]
Length = 410
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 137/277 (49%), Gaps = 52/277 (18%)
Query: 123 LKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKK 176
L + PKILITT ++ A + L S+ PNS Y +R + +K+I ++A
Sbjct: 177 LNETKTPKILITTAINSTLHHEAKL--LTSLFPNSVYIRRTAHHHAHKFSIKEISKFASN 234
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 236
++FT++IVV+ ++++ L I+ LP GP HF +S + K + HG + PEL+LNN
Sbjct: 235 RNFTALIVVNEDQKKVSGLDIVHLPQGPMFHFSVSNWIEGKKLPGHGTASEAYPELILNN 294
Query: 237 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILC 296
F + LG L +SL+P P+ GR+VVT HNQRD+ F R H
Sbjct: 295 FRSPLGILTAHLFKSLWPPQPDLAGRQVVTIHNQRDYCFVRRH----------------- 337
Query: 297 SYLTSIMKAFCYYECRYIFETK---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPR 353
RY+F K E D +GK+ K + KT LQE GPR
Sbjct: 338 ---------------RYVFREKRETEKPVVDTDGKEIKGVEGIKTG-------LQELGPR 375
Query: 354 FTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
TLKL + G + G E+EW K +M+ +R +F L
Sbjct: 376 MTLKLRRVDKGIQRSSGQEWEW--KGKMEKTRTKFQL 410
>gi|452000085|gb|EMD92547.1| hypothetical protein COCHEDRAFT_1194011 [Cochliobolus
heterostrophus C5]
Length = 435
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 127/268 (47%), Gaps = 48/268 (17%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKIL+TT +S A + L S+ PNS Y +R Y +++I +A + +T++
Sbjct: 206 PKILVTTSINSSLHKEADV--LTSIFPNSTYIRRTKHAHAHKYSVREIAGFAAARGYTAL 263
Query: 183 IVVHTNRRE--PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 240
+++ + E PD L I+ LP+GP HF +S V K + H N TGH PEL+LN+F T
Sbjct: 264 VILMQAQHEKKPDGLDIVNLPNGPHFHFSVSNWVDGKKLPRHANDTGHYPELILNHFKTP 323
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLT 300
LG +L ++LFP PE GR+V+T HNQRD+IF R H
Sbjct: 324 LGVLTAQLFKNLFPPFPELEGRQVLTLHNQRDYIFVRRH--------------------- 362
Query: 301 SIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 360
RY+F K G K + V +QE GPR TLKL
Sbjct: 363 -----------RYVFRDKRETEKPVLGTDGKPI----PGAEDVKVGMQEIGPRMTLKLRR 407
Query: 361 LQHGTFDTKGGEFEWVHKPEMDTSRRRF 388
+ G G E++W K MD R RF
Sbjct: 408 IDRGIQFKSGQEWQW--KGRMDKQRTRF 433
>gi|452821009|gb|EME28044.1| hypothetical protein Gasu_43850 [Galdieria sulphuraria]
Length = 291
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 137/305 (44%), Gaps = 58/305 (19%)
Query: 86 RMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPA 145
R P T+E+ R +P+D + DEFS + PK+++ +
Sbjct: 45 RKPPLTLEDKRV-QIVGFQPEDRVVIDYTLFDEFSDVFSGAVIPKVVVVPGLKATRMTYN 103
Query: 146 FISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPT 205
FISELL +IPNS +Y+R L + A +K FT +I NR++ L + LP GP
Sbjct: 104 FISELLQIIPNSVFYERKKSSLNQASVKAAEKGFTDVIFTEENRKQITGLFHVHLPHGPC 163
Query: 206 AHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 265
A++ + V K + HG T PE++L++F T+LG R+ R++ +LF PE+ GR+VV
Sbjct: 164 AYYSIRSYVPCKKVVGHGRSTASKPEVILSHFTTQLGIRIARMLGALFALEPEYSGRQVV 223
Query: 266 TFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDA 325
T HNQRDFIFFR H RY F+ + K S
Sbjct: 224 TLHNQRDFIFFRFH--------------------------------RYQFDDRGVKVS-- 249
Query: 326 NGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSR 385
LQE GPRFTL+L L G E E+ K + S+
Sbjct: 250 ---------------------LQEQGPRFTLQLQQLTKGLPGNDDAEIEFRKKKK--ASK 286
Query: 386 RRFFL 390
FFL
Sbjct: 287 YEFFL 291
>gi|297826219|ref|XP_002880992.1| hypothetical protein ARALYDRAFT_901791 [Arabidopsis lyrata subsp.
lyrata]
gi|297326831|gb|EFH57251.1| hypothetical protein ARALYDRAFT_901791 [Arabidopsis lyrata subsp.
lyrata]
Length = 254
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 134/276 (48%), Gaps = 58/276 (21%)
Query: 106 DDDELFAGNDADEFSSILKQGCAPKILITTCRFNS----NRGPAFISELLSVIPNSHYYK 161
DDD+L+AG D +E IL P+ LIT+ F + RGP EL+SV+PNS Y +
Sbjct: 18 DDDKLWAGFDWEETDKILSGEIKPRTLITSYPFPAIRYPQRGPLIAQELVSVVPNSCYVR 77
Query: 162 RGTYD-LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 220
RG L ++I AKK+ FTS+I+ HTN R D L+II L +G +A F++ + R +I
Sbjct: 78 RGIRSKLHEVIAKAKKRHFTSLILTHTNPRGHDELIIISLLNGASAVFRVIDFIPRAEIP 137
Query: 221 NHGNPTGH--IPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
N NP PEL + +F ++ R+IQ+LFP+ P GR + F Q + IFFR
Sbjct: 138 NCANPLSRRIYPELHMKSFDSQASVGTARMIQALFPKVPSSGGRPIAWFQKQNNHIFFRS 197
Query: 279 HRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKT 338
HR FCY E +S
Sbjct: 198 HR-------------------------FCYEE-------------------PLSGESSSV 213
Query: 339 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE 374
+Q QECGPRF LKL +++ +FDT G+F+
Sbjct: 214 RRQP-----QECGPRFALKLRAVERVSFDT--GKFK 242
>gi|189241108|ref|XP_972242.2| PREDICTED: similar to U3 small nucleolar ribonucleoprotein
component [Tribolium castaneum]
gi|270013895|gb|EFA10343.1| hypothetical protein TcasGA2_TC012561 [Tribolium castaneum]
Length = 312
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 125/235 (53%), Gaps = 28/235 (11%)
Query: 45 EKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCR 104
E+ +H L+ +K + KKL+ DA A++LG E +
Sbjct: 37 EENIPIHGDLQ-KKALHYSKKLEWEDAGPAAAVQLGGESGGALASSI------------- 82
Query: 105 PDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 164
DD+ +AG + PKI+ITT R S+R F+ EL + PN+ RG
Sbjct: 83 -DDEYRYAGVED------------PKIVITTSRDPSSRLKMFVKELRLIFPNAQRMNRGN 129
Query: 165 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 224
Y++K++I + D T IVVH +R PD+L++ LP GPTA+F +S +V+R DI + G
Sbjct: 130 YEMKQLIHACRANDVTDFIVVHEHRGVPDSLVVCHLPYGPTAYFTMSDVVMRHDIPDLGT 189
Query: 225 PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+ P L+ +NF T+LG RV +++ LFP P+ +R++TF N D+I FRHH
Sbjct: 190 MSEQYPHLIFHNFKTKLGERVTNILKYLFP-VPKEDSKRIITFANHDDYISFRHH 243
>gi|429860675|gb|ELA35401.1| RNA processing factor 1 [Colletotrichum gloeosporioides Nara gc5]
Length = 424
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 137/272 (50%), Gaps = 47/272 (17%)
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 181
PK+L+TT ++ A I SV PN+ Y R Y L++I ++A +D+T+
Sbjct: 191 VPKVLLTTSLNSTLHHEANI--FRSVFPNATYVPRSAHRFGHKYSLREISKFAANRDYTA 248
Query: 182 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 241
++++ ++++ + I+ LP GPT F ++ + K + HGNPT H PEL+LNNF T L
Sbjct: 249 VVMLKEDQKKLTGMSIVHLPAGPTFTFSITNFMEGKKLPGHGNPTNHYPELLLNNFKTPL 308
Query: 242 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTS 301
G L Q LFP PEF GR+V+T HNQRD++F+R H
Sbjct: 309 GMLTAALFQRLFPPQPEFEGRQVLTIHNQRDYLFWRRH---------------------- 346
Query: 302 IMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 361
RY+F +E + ++ N A+ SE + + LQE GPRFT KL +
Sbjct: 347 ----------RYVF--REKRETEKNIVTAEG--SEMKGVEGIRVGLQEVGPRFTAKLRRV 392
Query: 362 QHGT--FDTKGGEFE-WVHKPEMDTSRRRFFL 390
G ++G + + W K M+ R+RF L
Sbjct: 393 DKGIGRARSEGDDAQPWEWKARMEKDRKRFNL 424
>gi|296531435|ref|NP_001171858.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Saccoglossus
kowalevskii]
Length = 292
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 155/333 (46%), Gaps = 71/333 (21%)
Query: 57 QKKVEKRKKLK-ARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGND 115
++ +E+++K+K A DA + EL E A +++E E E V DDE
Sbjct: 23 RQTLERKRKIKDALDADKPIPTELKGE--ALHLQKSLEYDDEGGEGVTSHVDDEYRWAGV 80
Query: 116 ADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 175
D PKI++TT R S++ F E+ P + RG Y++ I++ +
Sbjct: 81 ED-----------PKIMVTTSREPSSKLKRFAKEMKLTFPTAQRMNRGHYEVSHIVQACR 129
Query: 176 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLN 235
D T +IV+H +R EPD ++I LP GPTA+F LS V+R DI + G + P L+ +
Sbjct: 130 ANDVTDLIVLHEHRGEPDGMIICHLPYGPTAYFTLSNTVMRHDIPDIGTMSEAYPHLIFH 189
Query: 236 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTIL 295
NF ++LG RV +++ LFP P+ +RV+TF NQ D+I FRHH +E
Sbjct: 190 NFNSKLGERVQNILKYLFP-VPKDESKRVITFANQEDYISFRHHVYKKIE---------- 238
Query: 296 CSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 355
NGK + L+E GPRF
Sbjct: 239 ------------------------------NGKDIE---------------LKEIGPRFE 253
Query: 356 LKLVSLQHGTF-DTKGGEFEWVHKPEMDTSRRR 387
+KL ++ GT + + EW KP M+T+++R
Sbjct: 254 MKLYEIKLGTLEEASTADIEWKLKPYMNTAKKR 286
>gi|389639260|ref|XP_003717263.1| brix domain-containing protein [Magnaporthe oryzae 70-15]
gi|351643082|gb|EHA50944.1| brix domain-containing protein [Magnaporthe oryzae 70-15]
Length = 452
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 137/288 (47%), Gaps = 53/288 (18%)
Query: 116 ADEFSSILKQGC--APKILITTC-RFNSNRGPAFISELLSVIPNSHYYKRGT------YD 166
A +F ++ +G PKIL+TT R +R I+ S+ PNS Y R + Y
Sbjct: 205 ARKFPTLFTEGPHPTPKILVTTSLRATIHREAQIIT---SLFPNSQYVPRSSHRYGHKYS 261
Query: 167 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT 226
L++I +++ +DFT++I++ ++++P + ++ LP+GPT HF ++ + + HGN
Sbjct: 262 LREICKFSTNRDFTAVILIREDQKKPTGMTVVHLPEGPTFHFTINNWIEGSKLPGHGNSQ 321
Query: 227 GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEF 286
G PEL+LN F T LG +L++ LFP PE GR VVT HNQRD++F R HR
Sbjct: 322 GFYPELLLNRFTTPLGLLTAQLLRRLFPYQPEIAGREVVTIHNQRDYLFVRRHR------ 375
Query: 287 ISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITR 346
+ Y E R E D GK E +
Sbjct: 376 -------------------YVYRERRQT----EKTVVDEEGK-------EIPGFSDIRVG 405
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGE----FEWVHKPEMDTSRRRFFL 390
LQE GPRFTLKL + G G E +W K M+ R +F L
Sbjct: 406 LQEIGPRFTLKLRRVDKG-IGRAGSEGDDAVQWEWKAGMEKVRTKFNL 452
>gi|440468847|gb|ELQ37981.1| brix domain-containing protein [Magnaporthe oryzae Y34]
gi|440484736|gb|ELQ64765.1| brix domain-containing protein [Magnaporthe oryzae P131]
Length = 426
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 137/288 (47%), Gaps = 53/288 (18%)
Query: 116 ADEFSSILKQGC--APKILITTC-RFNSNRGPAFISELLSVIPNSHYYKRGT------YD 166
A +F ++ +G PKIL+TT R +R I+ S+ PNS Y R + Y
Sbjct: 179 ARKFPTLFTEGPHPTPKILVTTSLRATIHREAQIIT---SLFPNSQYVPRSSHRYGHKYS 235
Query: 167 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT 226
L++I +++ +DFT++I++ ++++P + ++ LP+GPT HF ++ + + HGN
Sbjct: 236 LREICKFSTNRDFTAVILIREDQKKPTGMTVVHLPEGPTFHFTINNWIEGSKLPGHGNSQ 295
Query: 227 GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEF 286
G PEL+LN F T LG +L++ LFP PE GR VVT HNQRD++F R HR
Sbjct: 296 GFYPELLLNRFTTPLGLLTAQLLRRLFPYQPEIAGREVVTIHNQRDYLFVRRHR------ 349
Query: 287 ISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITR 346
+ Y E R E D GK E +
Sbjct: 350 -------------------YVYRERRQT----EKTVVDEEGK-------EIPGFSDIRVG 379
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGE----FEWVHKPEMDTSRRRFFL 390
LQE GPRFTLKL + G G E +W K M+ R +F L
Sbjct: 380 LQEIGPRFTLKLRRVDKG-IGRAGSEGDDAVQWEWKAGMEKVRTKFNL 426
>gi|326430621|gb|EGD76191.1| U3 small nucleolar ribonucleoprotein IMP4 [Salpingoeca sp. ATCC
50818]
Length = 283
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 166/356 (46%), Gaps = 74/356 (20%)
Query: 36 ILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENT 95
+L I+ +++ A+ Q ++E++K+ A K ALE G+ P +
Sbjct: 1 MLRRQIRERQEYLFKRAQQTKQHEIEQKKR------ALKAALEAGKPIPTEL------RG 48
Query: 96 REPDETVCRPDDDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVI 154
EP+ DD+ DE+ K G P+I+ITT R S R F E+ +
Sbjct: 49 EEPELRRLLALDDQQKTDVRDDEYR---KAGVEDPRIMITTSRDPSARLKQFTKEMKLLF 105
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
P + RG LK++++ + + T +I+VH R EPD L++ +P GPTA+F LS +V
Sbjct: 106 PTAQRLNRGGTILKELVQVCRDIEVTDLIIVHERRGEPDGLIVSHMPYGPTAYFTLSNVV 165
Query: 215 LRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFI 274
+R DI++ G + P L+ + F+T LG RV +++ LFP P RRV+TF N D+I
Sbjct: 166 MRHDIEDPGKMSEANPHLIFHGFSTPLGERVTSILKFLFP-VPRDDTRRVMTFANDSDYI 224
Query: 275 FFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAK 334
FRH +++T KK K+ +
Sbjct: 225 SFRH-----------HVYT----------------------------------KKGKEVE 239
Query: 335 SEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L E GPRF +KL ++ GT D + EWV++P M+T+++R FL
Sbjct: 240 ------------LAEIGPRFEMKLYHIKLGTVDQDDADTEWVYRPYMNTAKKRTFL 283
>gi|449451998|ref|XP_004143747.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Cucumis sativus]
Length = 293
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 149/329 (45%), Gaps = 85/329 (25%)
Query: 65 KLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILK 124
+L+ +AA ++ +EL +E A PRT DDE ++ D
Sbjct: 45 ELRNEEAALRKEIELEDELTA--VPRT-------------HIDDEYANASEVD------- 82
Query: 125 QGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 184
PKILITT R S F EL V PN+ RG + +IIE + +FT +I+
Sbjct: 83 ----PKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVIL 138
Query: 185 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI---KNHGNPTGHIPELVLNNFATRL 241
VH +R PD L+I LP GPTA+F L +V R +I K G P ++LNNF T+L
Sbjct: 139 VHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKTMGTMPEAYPHIILNNFTTKL 198
Query: 242 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTS 301
G R +++ LFP P+ +RVVTF NQ D+I FRHH
Sbjct: 199 GERTANILKHLFP-VPKPDTKRVVTFANQSDYISFRHH---------------------- 235
Query: 302 IMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 361
I+E K AKS L+E GPRF L+L +
Sbjct: 236 ------------IYE------------KHGGAKS---------IELKEIGPRFELRLYQI 262
Query: 362 QHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ GT D + EWV +P M T+++R FL
Sbjct: 263 KLGTVDQTEAQNEWVIRPYMKTTKKRDFL 291
>gi|307210238|gb|EFN86888.1| Probable ribosome production factor 1 [Harpegnathos saltator]
Length = 145
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 109/200 (54%), Gaps = 59/200 (29%)
Query: 195 LLIIGLPDGPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLF 253
+L+I LPDGPTAHFKLS + + ++K +H T H PE++LNN TRLG V R++ +LF
Sbjct: 1 MLVIHLPDGPTAHFKLSNVKITTELKRSHKEITEHRPEVILNNSTTRLGFTVARMLGALF 60
Query: 254 PQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRY 313
P+F+GRRVVTFHNQRD+IFF+HH RY
Sbjct: 61 HYQPQFKGRRVVTFHNQRDYIFFKHH--------------------------------RY 88
Query: 314 IFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEF 373
F K NGK R E GPRF L+L SLQHGTFD+K G++
Sbjct: 89 EFNLK-------NGK----------------PRSPELGPRFILRLKSLQHGTFDSKYGDY 125
Query: 374 EWV---HKPEMDTSRRRFFL 390
EW+ + +M+TSRR+ FL
Sbjct: 126 EWIIQGQRHDMETSRRKIFL 145
>gi|212536098|ref|XP_002148205.1| RNA processing factor 1 [Talaromyces marneffei ATCC 18224]
gi|210070604|gb|EEA24694.1| RNA processing factor 1 [Talaromyces marneffei ATCC 18224]
Length = 412
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 136/275 (49%), Gaps = 52/275 (18%)
Query: 125 QGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKD 178
Q +PKILITT ++ A + L S+ PNS Y +R + +K+I ++A ++
Sbjct: 181 QTTSPKILITTAINSTLHHEAKL--LTSLFPNSVYIRRTAHHHAHKFSVKEISKFASNRN 238
Query: 179 FTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFA 238
FT++I+V+ ++++ L I+ LP GP HF +S + K + HG + PEL+LNNF
Sbjct: 239 FTALIIVNEDQKKVSGLDIVHLPQGPMFHFSVSNFIEDKKLPGHGTASDAFPELILNNFR 298
Query: 239 TRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSY 298
+ LG L +SL+P P+ R+VVT HNQRD+ F R H
Sbjct: 299 SPLGILTAHLFKSLWPPQPDLAYRQVVTIHNQRDYCFVRRH------------------- 339
Query: 299 LTSIMKAFCYYECRYIFETK---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 355
RY+F K E D +GK+ K + KT LQE GPR T
Sbjct: 340 -------------RYVFREKRETEKPVVDTDGKEIKGVEGIKTG-------LQELGPRMT 379
Query: 356 LKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LKL + G + G E+EW K +M+ +R +F L
Sbjct: 380 LKLRRVDKGIQRSSGQEWEW--KGKMEKTRTKFQL 412
>gi|302818007|ref|XP_002990678.1| hypothetical protein SELMODRAFT_185462 [Selaginella moellendorffii]
gi|300141600|gb|EFJ08310.1| hypothetical protein SELMODRAFT_185462 [Selaginella moellendorffii]
Length = 291
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 109/190 (57%), Gaps = 19/190 (10%)
Query: 93 ENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLS 152
ENT EP V DD+ +AG PKIL+TT R S+R F+ EL
Sbjct: 62 ENTAEPTTHV---DDEYAYAGE------------VDPKILLTTSRDPSSRLTQFVKELKI 106
Query: 153 VIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSK 212
V PN+ RG + +I+E + DFT II+VH +R EPD L++ LP GPTA+F L
Sbjct: 107 VFPNAQRMNRGGQVIAEIVESCRAHDFTDIIMVHEHRGEPDGLIVCHLPYGPTAYFGLMN 166
Query: 213 LVLRKDIKNH---GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHN 269
+V R DIK+ G + P L+LNNF T+LG R +++ LFP P+ +R++TF N
Sbjct: 167 VVTRHDIKDKKGLGTMSEAYPHLILNNFNTKLGMRTSNILKYLFP-VPKPDSKRLITFAN 225
Query: 270 QRDFIFFRHH 279
Q+D+I FRHH
Sbjct: 226 QQDYISFRHH 235
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L+E GPRF L+L ++ GT D + EWV +P M++SR+R L
Sbjct: 248 LKEVGPRFELRLYQIKLGTVDQVEAQNEWVIRPYMNSSRKRAAL 291
>gi|290983235|ref|XP_002674334.1| predicted protein [Naegleria gruberi]
gi|284087924|gb|EFC41590.1| predicted protein [Naegleria gruberi]
Length = 317
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 135/284 (47%), Gaps = 62/284 (21%)
Query: 112 AGNDADEFSSILKQGCA------PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTY 165
+G++ ++ S+++ A PKIL+TT S+R F+ EL + PN RG
Sbjct: 66 SGDNDNQISNLIDNEYANAGQEDPKILLTTALDPSDRLKRFVKELRFLFPNCQRMNRGRQ 125
Query: 166 DLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HG 223
++I++ A + FT ++++H N+ EPD +++ LP GPTA+F + +V+R ++ N
Sbjct: 126 QTQEIVQAATQNGFTDLVMIHENKGEPDTMIVTHLPHGPTAYFTMFNVVMRHEVMNLREE 185
Query: 224 NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVP 283
P L+ +NF T+LG RV +++ LFP P+ R+VTF N DFI FRHH
Sbjct: 186 KMPQQFPHLIFHNFKTKLGERVATILKYLFP-VPKQESNRIVTFANDNDFISFRHH---- 240
Query: 284 LEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKV 343
YM + S G+
Sbjct: 241 -----VYM--------------------------RNSPGTTPP----------------- 252
Query: 344 ITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 387
+L+E GPRF L+L ++ GT K E EWV +P M+T+ +R
Sbjct: 253 -IQLKEVGPRFELQLFQIRLGTVADKDAELEWVLRPYMNTASKR 295
>gi|66514411|ref|XP_395323.2| PREDICTED: u3 small nucleolar ribonucleoprotein protein IMP4-like
[Apis mellifera]
Length = 311
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 123/235 (52%), Gaps = 28/235 (11%)
Query: 45 EKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCR 104
E+ +H LK + + +K+L DA + A+ +G E T+
Sbjct: 37 EQNIPIHPDLK-KDALNIQKQLAWEDAGPEMAIAIGTEMGG---------------TLAS 80
Query: 105 PDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 164
+DDE D PKI+ITT R S+R F+ EL + PNS RG
Sbjct: 81 HEDDEYRWAGVED-----------PKIVITTSRDPSSRLKMFVKELRLIFPNSQRMNRGN 129
Query: 165 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 224
Y++K++I + D T I+VH +R PD+++I LP GPTA+F +S +++R DI N G
Sbjct: 130 YEMKQLIHACRANDVTDFIIVHEHRGIPDSIIICHLPYGPTAYFTMSDVIMRHDIPNIGT 189
Query: 225 PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+ P L+ +NF T+LG RV +++ LFP P+ +R++TF N D+I FRHH
Sbjct: 190 MSEQYPHLIFHNFKTKLGERVMNILKYLFP-VPKEDSKRIITFANHDDYISFRHH 243
>gi|156082537|ref|XP_001608753.1| Brix domain containing protein [Babesia bovis T2Bo]
gi|154796002|gb|EDO05185.1| Brix domain containing protein [Babesia bovis]
Length = 293
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 132/258 (51%), Gaps = 56/258 (21%)
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHT 187
PKI++TT R S+R F E+ +IPNS RG+Y LK ++ + K KD + I++++
Sbjct: 82 TPKIMVTTSRDPSSRLSQFAKEVRLIIPNSERMNRGSYILKDLVTFCKSKDVSDIVLLYE 141
Query: 188 NRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH--IPELVLNNFATRLGHRV 245
+R EP+A++I LP GPTA+F+LS++VLR D+ PT P L+ +NF+++LG RV
Sbjct: 142 HRGEPNAMIICHLPHGPTAYFQLSQVVLRHDLPE-KPPTMSEAYPHLIFHNFSSQLGERV 200
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKA 305
+I+ +FP + E RV++F N+RD+I FRHH +WT
Sbjct: 201 KNIIRYMFPPANE-DETRVLSFVNKRDYIHFRHH-----------VWT------------ 236
Query: 306 FCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT 365
S D + K+ + L E GPRF ++ ++ GT
Sbjct: 237 --------------SNNRDGDDKEVQ---------------LTEVGPRFIMRPFKIELGT 267
Query: 366 FDTKGGEFEWVHKPEMDT 383
D + E EW +P ++
Sbjct: 268 VDMRDIETEWALRPYFNS 285
>gi|322800158|gb|EFZ21243.1| hypothetical protein SINV_01837 [Solenopsis invicta]
Length = 311
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 124/230 (53%), Gaps = 27/230 (11%)
Query: 50 VHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDE 109
+H+ L+ + ++K++ DA + A+ +G E M + N DD+
Sbjct: 42 IHSDLR-SSALHVQRKIEWEDAGPQMAIAMGTE----MGGGAVAN---------HEDDEY 87
Query: 110 LFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKK 169
+AG + PKI++TT R S+R F+ EL + PNS RG Y++K+
Sbjct: 88 RWAGVED------------PKIVVTTSRDPSSRLKMFVKELRLIFPNSQRMNRGNYEMKQ 135
Query: 170 IIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI 229
+I + D T I+VH +R PDAL+I LP GPTA+F LS +++R DI G +
Sbjct: 136 LIHACRANDVTDFIIVHEHRGVPDALVICHLPYGPTAYFTLSGVIMRHDIPEIGTMSEQY 195
Query: 230 PELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
P L+ +NF T+LG RV +++ LFP P+ +RV++F N D+I FRHH
Sbjct: 196 PHLIFHNFKTKLGERVMSILKYLFP-VPKEDSKRVISFANHDDYICFRHH 244
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTK-GGEFEWVHKPEMDTSRRRFFL 390
L E GPRF +KL ++ GT DT+ + EW +P M+TS +R FL
Sbjct: 256 LTEVGPRFQMKLYEIKLGTLDTESAADTEWALRPYMNTSHKRRFL 300
>gi|367028002|ref|XP_003663285.1| hypothetical protein MYCTH_2305019 [Myceliophthora thermophila ATCC
42464]
gi|347010554|gb|AEO58040.1| hypothetical protein MYCTH_2305019 [Myceliophthora thermophila ATCC
42464]
Length = 427
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 126/279 (45%), Gaps = 54/279 (19%)
Query: 127 CAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFT 180
PKIL+TT + A E+ SV PN+ Y R Y +++I ++AK + +T
Sbjct: 188 VMPKILVTTGLNGTIHKEA--QEIASVFPNATYIPRSAHRYSYKYSVREIAKFAKNRGYT 245
Query: 181 SIIVVHTNRREPDALLII-----GLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLN 235
+++VV + + P L + G+P GPT + + K I HGNPT H PEL+LN
Sbjct: 246 ALLVVQEDLKRPSQLSVCHLNGEGVPPGPTLTYTIRNYQPGKAIVGHGNPTNHYPELLLN 305
Query: 236 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTIL 295
F T LG + + +LFP PE GR+VVT HNQRD+IFFR H
Sbjct: 306 GFKTPLGLLAAKSMNTLFPPKPELAGRQVVTLHNQRDYIFFRRH---------------- 349
Query: 296 CSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 355
RY+F + G KD + K + LQE GPR T
Sbjct: 350 ----------------RYVFREARPTEKNVQGADGKDLEGVKG----IRAGLQEIGPRMT 389
Query: 356 LKLVSLQHGTFDTKGGEFE----WVHKPEMDTSRRRFFL 390
LKL + G G E E W K +M+ R RF L
Sbjct: 390 LKLRRVDKG-VGRAGSEGEDALKWEWKAKMEKKRTRFNL 427
>gi|302410787|ref|XP_003003227.1| brix domain-containing protein [Verticillium albo-atrum VaMs.102]
gi|261358251|gb|EEY20679.1| brix domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 412
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 122/241 (50%), Gaps = 44/241 (18%)
Query: 130 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSII 183
KILITT ++ A I ++ PNS+Y +R Y L++I +A +++T+++
Sbjct: 189 KILITTSLNSTLHHEADI--FCTLFPNSNYIRRTQHHYGHKYSLREISRFAANREYTAVV 246
Query: 184 VVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGH 243
++ +++ L ++ LP GPT F ++ + K + HGNPT H PEL+LNNF T LG
Sbjct: 247 MLREDQKVLTGLTVVHLPSGPTFTFSVTNFMEGKKLPGHGNPTNHYPELLLNNFKTPLGM 306
Query: 244 RVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIM 303
+L Q+LFP PEF GR+V+T HNQRD++F+R H
Sbjct: 307 LTAKLFQTLFPPQPEFVGRQVLTVHNQRDYLFWRRH------------------------ 342
Query: 304 KAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQH 363
RY+F K + + + KD + + + LQE GPRFTLKL +
Sbjct: 343 --------RYVFRDKRTTEKNITTAEGKDLE----GVEGIRVGLQEVGPRFTLKLRRVDK 390
Query: 364 G 364
G
Sbjct: 391 G 391
>gi|357456827|ref|XP_003598694.1| U3 small nucleolar ribonucleoprotein IMP4 [Medicago truncatula]
gi|355487742|gb|AES68945.1| U3 small nucleolar ribonucleoprotein IMP4 [Medicago truncatula]
gi|388501230|gb|AFK38681.1| unknown [Medicago truncatula]
Length = 291
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 149/329 (45%), Gaps = 85/329 (25%)
Query: 65 KLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILK 124
+L+ +AA +R ++L +E NT P + DD+ FA
Sbjct: 45 ELRNEEAALRREIDLEDE-----------NTAVPRSHI---DDEYAFAAEKD-------- 82
Query: 125 QGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 184
PKIL+TT R S F+ EL V PN+ RG + +II+ + D+T +I+
Sbjct: 83 ----PKILLTTSRDPSAPLKQFVKELSIVFPNAERMNRGGQVISEIIDSCRSHDYTDVIL 138
Query: 185 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELVLNNFATRL 241
VH +R PD L++ LP GPTA+F L +V R +I++ G P ++L+NF T+L
Sbjct: 139 VHEHRGVPDGLIVCHLPFGPTAYFGLLNVVTRHEIRDRKAVGTMPEAYPHIILDNFETKL 198
Query: 242 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTS 301
G R +++ LFP P+ +R+VTF N+ D+I FRHH
Sbjct: 199 GERTANILKHLFP-VPKPDTKRIVTFANKSDYISFRHH---------------------- 235
Query: 302 IMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 361
I+E + S L+E GPRF L+L +
Sbjct: 236 ------------IYEKQAGPKS---------------------VELKEIGPRFELRLYQI 262
Query: 362 QHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ GT D + EWV +P M+T+R+R FL
Sbjct: 263 KLGTVDQAEAQTEWVIRPYMNTTRKRNFL 291
>gi|156396614|ref|XP_001637488.1| predicted protein [Nematostella vectensis]
gi|156224600|gb|EDO45425.1| predicted protein [Nematostella vectensis]
Length = 289
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 94/151 (62%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT S+R F E+ V PNS RG Y +K++++ K D T +I+VH +
Sbjct: 83 PKIMITTSHNPSSRLKQFAKEMRLVFPNSQRLNRGNYVMKQLVDACKANDVTDLIIVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R EPD L++ LP GPTA+F LS V+R DI G + P L+ +NF ++LG RV +
Sbjct: 143 RGEPDGLVVCHLPFGPTAYFTLSSTVMRHDIPKIGTMSEAYPHLIFHNFKSKLGDRVRNI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RRVVTF NQ D+I FRHH
Sbjct: 203 LKYLFP-VPKEDTRRVVTFANQSDYISFRHH 232
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 387
L E GPRF +K+ ++ GT D E EW KP M+TS++R
Sbjct: 243 LSEVGPRFEMKVYEIKLGTVDQIEAETEWRLKPYMNTSKKR 283
>gi|340959320|gb|EGS20501.1| hypothetical protein CTHT_0023330 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 436
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 131/277 (47%), Gaps = 54/277 (19%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKIL+TT + A E+ S+ PN+ Y +R Y +++I ++AK + +T++
Sbjct: 199 PKILVTTGINGTIHKEA--EEIASIFPNATYIRRTAHRYAYKYSVREIAKFAKNRGYTAL 256
Query: 183 IVVHTNRREPDALLII-----GLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNF 237
+VV +++ P L+++ G+P GPT + + K I HG T H PEL+LNNF
Sbjct: 257 LVVQEDQKRPSRLVVVHLNGEGVPPGPTLTYTIRNYAPGKAIPGHGRATNHYPELLLNNF 316
Query: 238 ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCS 297
T LG + + LFP PE GR+VVT HNQRD+IFFR HR
Sbjct: 317 KTPLGLLAAKSMHILFPSKPELAGRQVVTLHNQRDYIFFRRHR----------------- 359
Query: 298 YLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 357
+ + E R E A+GK+ + K + LQE GPR TLK
Sbjct: 360 --------YVFREAR----PTEKNVVGADGKEMEGVKGIRAG-------LQEIGPRMTLK 400
Query: 358 LVSLQHGTFDTKGGE----FEWVHKPEMDTSRRRFFL 390
L + G G E +W K +M+ R RF L
Sbjct: 401 LRRVDKGV-GRAGSEGPDAVKWEWKAKMEKKRTRFNL 436
>gi|289740219|gb|ADD18857.1| U3 small nucleolar ribonucleoprotein component snoRNP [Glossina
morsitans morsitans]
Length = 299
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 161/351 (45%), Gaps = 80/351 (22%)
Query: 46 KRSAVHAK---LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP--DE 100
+R +H K ++H K VEKR +L+ + A R + + A +++ +E E
Sbjct: 9 RREYLHKKAIEVRHNKIVEKRNQLR-KSLANNRPIRGSLQAEAVQLQNSLKYDKEGVLGE 67
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
V DD+ +AG PKI++TT S+R FI EL + PN+
Sbjct: 68 DV---DDEYRYAGYQD------------PKIMLTTSHEPSSRLKMFIKELRLIFPNAKRM 112
Query: 161 KRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 220
RG Y+LK++I + D + IVVH +R PD L+I LP GPTA F +S +++R DI
Sbjct: 113 NRGKYELKELIHACRANDVSDFIVVHEHRGVPDNLIICHLPYGPTAFFNISGVIMRHDIP 172
Query: 221 NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHR 280
N G + P L+ +NF T+LG R ++++ LFP P+ +RV+TF N D+I
Sbjct: 173 NIGTISEQKPHLIFHNFKTKLGERTLKILKHLFP-VPKEDSKRVITFANNDDYI------ 225
Query: 281 CVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQ 340
AF ++ Y+ KE
Sbjct: 226 ------------------------AFRHHVYEYV--NKE--------------------- 238
Query: 341 QKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 390
+L E GPRF LKL ++ GT D + EW+ +P M+TS ++ FL
Sbjct: 239 ----LQLVEVGPRFQLKLYQIKLGTLDEIQAANTEWILRPYMNTSSKKRFL 285
>gi|260814243|ref|XP_002601825.1| hypothetical protein BRAFLDRAFT_279143 [Branchiostoma floridae]
gi|229287127|gb|EEN57837.1| hypothetical protein BRAFLDRAFT_279143 [Branchiostoma floridae]
Length = 290
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 127/227 (55%), Gaps = 11/227 (4%)
Query: 56 HQKKVE-KRKKLKARDAAEKRALELGEEPPA--RMTPRTIENTREPDETVCRPDDDELFA 112
++K +E K K ++ R KRAL+ + P R + +E + D+ + D +
Sbjct: 14 YRKSIEDKEKTIQERKQRLKRALDENKPIPTELRKDVKELEKALQYDDLGAEAEQDHM-- 71
Query: 113 GNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 172
+D ++ + PK+++TT R S+R F E+ V PN+ RG Y+L++++E
Sbjct: 72 -DDEYRWAGV----EDPKVMLTTSRDPSSRLKQFAKEMRLVFPNAQRLNRGHYELEQLVE 126
Query: 173 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPEL 232
+ D T I++ +R EPD ++I LP GPTA+F L V+R DI N G + P L
Sbjct: 127 ACRANDVTDFIILTEHRGEPDGIIISHLPYGPTAYFTLMNTVMRHDIPNIGTMSEQYPHL 186
Query: 233 VLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+ NNF+++LG RV +++ LFP P+ RRV+TF NQ DFI FRHH
Sbjct: 187 IFNNFSSKLGERVKSILKYLFP-VPKEDSRRVMTFANQDDFISFRHH 232
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 390
LQE GPRF ++L S++ GT D + EW +P M+T+++R FL
Sbjct: 244 LQEVGPRFEMRLYSIKLGTLDQVAAADTEWQLRPYMNTAKKRKFL 288
>gi|403220431|dbj|BAM38564.1| U3 small nucleolar ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 292
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 130/258 (50%), Gaps = 54/258 (20%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+LITT R S+R F E+ +IPNS RG+Y LK ++E+ + KD + +++++
Sbjct: 83 PKVLITTSRSPSSRLLQFAKEMCLIIPNSERLNRGSYVLKDLVEFCRTKDVSDMVLIYET 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLNNFATRLGHRVGR 247
R +P++++I LP GPTA+F+LS++VLR D+ + + P LV +NF ++LG R
Sbjct: 143 RGKPNSMIISHLPHGPTAYFQLSEVVLRHDLPEKLPTMSQAYPHLVFHNFTSQLGERFKD 202
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFC 307
+I+ +FP P RV++F N++D I FRHH +WT
Sbjct: 203 IIRYMFP-PPNTNETRVLSFVNEKDKIIFRHH-----------VWT-------------- 236
Query: 308 YYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 367
+AK EK L+E GPRF LK ++ GT D
Sbjct: 237 ---------------------EAKTGAEEKN------VALKEIGPRFKLKPYKIELGTVD 269
Query: 368 TKGGEFEWVHKPEMDTSR 385
+ E EWV +P +T +
Sbjct: 270 MRDLETEWVLRPYFNTHK 287
>gi|406696412|gb|EKC99702.1| hypothetical protein A1Q2_06012 [Trichosporon asahii var. asahii
CBS 8904]
Length = 430
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 133/269 (49%), Gaps = 18/269 (6%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG---TYDLKKIIEYAKKKDFTSIIVV 185
P+IL+TT + F EL +V P ++KR ++L ++ +A K+ + + IVV
Sbjct: 173 PRILLTTSPGPTKATYQFCDELKNVFPGGEFFKRPKGRGFELGRVARWAAKRGYHACIVV 232
Query: 186 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRV 245
+ + ++P+A+ +I LP GPTA+FKLS + L +I L+LN F T LG+ V
Sbjct: 233 NEDHKKPNAITLINLPAGPTAYFKLSSVQLSSEIY-----------LILNGFTTLLGNAV 281
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKA 305
GR+ LFP P+FRGR+VVT HNQRDF+FFR HR + I + +
Sbjct: 282 GRMFGQLFPSLPQFRGRQVVTLHNQRDFLFFRRHRYAFASPTEAKLQEIGPRFTLKLRWM 341
Query: 306 FCYYECRYIFETKESKGSDANGK---KAKDAKSEKTSQQKVITRLQECGPRFTLKLV-SL 361
+ + + G D G D+ E +QQ+ + ++ S
Sbjct: 342 RKGLPGVKAADGRMAAGGDKGGDTEFAVDDSDDEDVAQQEKDDEAEAAAAMARGEITPSG 401
Query: 362 QHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
Q + E+EW KP+M+ SRR FFL
Sbjct: 402 QPIPALDEEQEYEWKWKPKMEVSRRTFFL 430
>gi|401888364|gb|EJT52322.1| hypothetical protein A1Q1_04533 [Trichosporon asahii var. asahii
CBS 2479]
Length = 430
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 133/269 (49%), Gaps = 18/269 (6%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG---TYDLKKIIEYAKKKDFTSIIVV 185
P+IL+TT + F EL +V P ++KR ++L ++ +A K+ + + IVV
Sbjct: 173 PRILLTTSPGPTKATYQFCDELKNVFPGGEFFKRPKGRGFELGRVARWAAKRGYHACIVV 232
Query: 186 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRV 245
+ + ++P+A+ +I LP GPTA+FKLS + L +I L+LN F T LG+ V
Sbjct: 233 NEDHKKPNAITLINLPAGPTAYFKLSSVQLSSEIY-----------LILNGFTTLLGNAV 281
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKA 305
GR+ LFP P+FRGR+VVT HNQRDF+FFR HR + I + +
Sbjct: 282 GRMFGQLFPSLPQFRGRQVVTLHNQRDFLFFRRHRYAFASPTEAKLQEIGPRFTLKLRWM 341
Query: 306 FCYYECRYIFETKESKGSDANGK---KAKDAKSEKTSQQKVITRLQECGPRFTLKLV-SL 361
+ + + G D G D+ E +QQ+ + ++ S
Sbjct: 342 RKGLPGVKAADGRMAAGGDKGGDTEFAVDDSDDEDVAQQEKDDEAEAAAAMARGEITPSG 401
Query: 362 QHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
Q + E+EW KP+M+ SRR FFL
Sbjct: 402 QPIPALDEEQEYEWKWKPKMEVSRRTFFL 430
>gi|213407280|ref|XP_002174411.1| U3 snoRNP-associated protein Imp4 [Schizosaccharomyces japonicus
yFS275]
gi|212002458|gb|EEB08118.1| U3 snoRNP-associated protein Imp4 [Schizosaccharomyces japonicus
yFS275]
Length = 289
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 130/243 (53%), Gaps = 16/243 (6%)
Query: 44 KEKRSAVHAK---LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRT-IENTREPD 99
+E+R ++ + L+ K EKR+ L+ ALE +E P + T ++ + D
Sbjct: 7 RERRQYIYKRNKELQEAKLNEKRRALRV-------ALESNKELPKEVQDDTQLQKDYKYD 59
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
E+ DD DE+ +I ++ PK+L+TT R S+R F E+ +IPN++
Sbjct: 60 ESKTAATDD---VPEIDDEYGTIGER--EPKVLVTTSREPSSRLAQFAKEMRLLIPNAYR 114
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
RG + ++E A+ D T I+V+H +R PD L+I LP GPT F L +VLR DI
Sbjct: 115 LNRGNIVVGSLVEAARANDVTDIVVLHEHRGNPDGLVISHLPYGPTVSFTLHNVVLRHDI 174
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
N G + P L+ +N T+LG R +++ +LFP P+ RVVTF N D+I FRHH
Sbjct: 175 PNTGTMSEAYPHLIFHNLTTKLGKRTQKVLSALFPPEPKDTTPRVVTFANNSDYISFRHH 234
Query: 280 RCV 282
V
Sbjct: 235 VYV 237
>gi|330940968|ref|XP_003306012.1| hypothetical protein PTT_19019 [Pyrenophora teres f. teres 0-1]
gi|311316713|gb|EFQ85900.1| hypothetical protein PTT_19019 [Pyrenophora teres f. teres 0-1]
Length = 437
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 122/270 (45%), Gaps = 48/270 (17%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
P+ILITT ++ A I L + PNS Y +R Y +K+I +A + +T++
Sbjct: 208 PQILITTSINSTLHKEADI--LTGLFPNSTYIRRTQHVHAHKYSVKEIASFASARGYTAL 265
Query: 183 IVVHTNRRE--PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 240
+++ E PD L I+ LP GP HF +S + K + H TGH PEL+LN F T
Sbjct: 266 VILMQAEHEKKPDGLDIVTLPHGPHFHFSVSNWIEGKKLPRHATDTGHYPELILNQFKTP 325
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLT 300
LG L ++LFP PE GR+V+T HNQRD+IF R H
Sbjct: 326 LGILTAHLFKNLFPAKPELEGRQVLTLHNQRDYIFVRRH--------------------- 364
Query: 301 SIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 360
RY+F K G K + V +QE GPR TLKL
Sbjct: 365 -----------RYVFRDKRGSEKSVLGNDGKPL----PGVEDVRVGMQEIGPRMTLKLRR 409
Query: 361 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ G G E++W K M+ R RF +
Sbjct: 410 IDRGIQFKSGQEWQW--KGRMEKKRTRFNM 437
>gi|385303071|gb|EIF47169.1| ribosome production factor 1 [Dekkera bruxellensis AWRI1499]
Length = 210
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 113/186 (60%), Gaps = 7/186 (3%)
Query: 78 ELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCR 137
EL E+ A P TI++ R DETV + E+ +D +E+ ++ PKIL+TT
Sbjct: 25 ELKEKRLAENVPATIDSKRVFDETV----NAEVEGQDDFEEYFKSPEKD--PKILLTTNA 78
Query: 138 FNSNRGPAFISELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALL 196
+ F + L+ +IPN+ + KR Y +K + +Y ++FT +IV++ +++E + +
Sbjct: 79 HAHKQAYEFAAMLVEIIPNTXFVKRKRQYSMKDMAKYCTHREFTHLIVINEDKKEVNGMT 138
Query: 197 IIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQS 256
+I LP+GPT +F ++ V RK I HG+PT HIPEL+LNNF TRLG V RL SLFP
Sbjct: 139 LIHLPEGPTFYFSINSXVKRKQITGHGSPTDHIPELILNNFTTRLGKTVARLFHSLFPHR 198
Query: 257 PEFRGR 262
PEF G+
Sbjct: 199 PEFPGK 204
>gi|189190278|ref|XP_001931478.1| ribosome production factor 1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973084|gb|EDU40583.1| ribosome production factor 1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 441
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 122/270 (45%), Gaps = 48/270 (17%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
P+ILITT ++ A I L + PNS Y +R Y +K+I +A + +T++
Sbjct: 212 PQILITTSINSTLHKEADI--LTGLFPNSTYIRRTKHVHAHKYSVKEIASFASARGYTAL 269
Query: 183 IVVHTNRRE--PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 240
+++ E PD L I+ LP GP HF +S + K + H TGH PEL+LN F T
Sbjct: 270 VILMQAEHEKKPDGLDIVTLPHGPHFHFSVSNWIEGKKLPRHATDTGHYPELILNQFKTP 329
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLT 300
LG L ++LFP PE GR+V+T HNQRD+IF R H
Sbjct: 330 LGILTAHLFKNLFPAKPELEGRQVLTLHNQRDYIFVRRH--------------------- 368
Query: 301 SIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 360
RY+F K G K + V +QE GPR TLKL
Sbjct: 369 -----------RYVFRDKRGSEKSVVGNDGKPI----PGVEDVRVGMQEIGPRMTLKLRR 413
Query: 361 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ G G E++W K M+ R RF +
Sbjct: 414 IDRGIQFKSGQEWQW--KGRMEKKRTRFNM 441
>gi|195504523|ref|XP_002099116.1| GE23555 [Drosophila yakuba]
gi|194185217|gb|EDW98828.1| GE23555 [Drosophila yakuba]
Length = 298
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 129/267 (48%), Gaps = 60/267 (22%)
Query: 126 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 184
GC PKI++TT S+R F+ EL +IPN+ RG Y L ++ + + T ++
Sbjct: 77 GCEDPKIMLTTSHNPSSRLKMFMKELRLIIPNAQQMNRGNYQLTTLMHACRANNVTDFLI 136
Query: 185 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 244
VH +R PD+L++ LP GPTA F +S +V+R DI + G+ + P L+ NNF T +G R
Sbjct: 137 VHEHRGIPDSLVVCHLPYGPTAFFNISDVVMRHDIPDIGHMSEQKPHLIFNNFKTPIGLR 196
Query: 245 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMK 304
++++ LFP P+ +RV++F N D I FRHH
Sbjct: 197 TVKILKHLFP-VPKENSQRVMSFLNHNDSIIFRHH------------------------- 230
Query: 305 AFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 364
+Y + KE + S+ GPRF+LKL ++ G
Sbjct: 231 -------QYKYVNKELELSE-------------------------VGPRFSLKLYQIKLG 258
Query: 365 TFDT-KGGEFEWVHKPEMDTSRRRFFL 390
T + K + EW+++P M+TS++R
Sbjct: 259 TLENIKAADTEWINRPYMNTSQKRLIF 285
>gi|195354762|ref|XP_002043865.1| GM17799 [Drosophila sechellia]
gi|194129103|gb|EDW51146.1| GM17799 [Drosophila sechellia]
Length = 298
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 129/267 (48%), Gaps = 60/267 (22%)
Query: 126 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 184
GC PKI++TT S+R F+ EL +IPN+ RG Y L ++ + + T ++
Sbjct: 77 GCEDPKIMLTTSHNPSSRLKMFMKELRLIIPNAQQMNRGNYQLTTLMHACRANNVTDFLI 136
Query: 185 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 244
VH +R PD+L++ LP GPTA F +S +V+R DI + G+ + P L+ NNF T +G R
Sbjct: 137 VHEHRGIPDSLVVCHLPYGPTAFFNISDVVMRHDIPDIGHMSEQKPHLIFNNFKTPIGLR 196
Query: 245 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMK 304
++++ LFP P+ +RV++F N D I FRHH
Sbjct: 197 TVKILKHLFP-VPKENSQRVMSFLNHNDSIIFRHH------------------------- 230
Query: 305 AFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 364
+Y + KE + S+ GPRF+LKL ++ G
Sbjct: 231 -------QYKYVNKELELSE-------------------------VGPRFSLKLYQIKLG 258
Query: 365 TFDT-KGGEFEWVHKPEMDTSRRRFFL 390
T + K + EW+++P M+TS++R
Sbjct: 259 TLENIKAADTEWINRPYMNTSQKRLIF 285
>gi|194908997|ref|XP_001981875.1| GG11358 [Drosophila erecta]
gi|190656513|gb|EDV53745.1| GG11358 [Drosophila erecta]
Length = 298
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 129/267 (48%), Gaps = 60/267 (22%)
Query: 126 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 184
GC PKI++TT S+R F+ EL +IPN+ RG Y L ++ + + T ++
Sbjct: 77 GCEDPKIMLTTSHNPSSRLKMFMKELRLIIPNAQQMNRGNYQLTTLMHACRANNVTDFLI 136
Query: 185 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 244
VH +R PD+L++ LP GPTA F +S +V+R DI + G+ + P L+ NNF T +G R
Sbjct: 137 VHEHRGIPDSLVVCHLPYGPTAFFNISDVVMRHDIPDIGHMSEQKPHLIFNNFKTPIGLR 196
Query: 245 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMK 304
++++ LFP P+ +RV++F N D I FRHH
Sbjct: 197 TVKILKHLFP-VPKENSQRVMSFLNHNDSIIFRHH------------------------- 230
Query: 305 AFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 364
+Y + KE + S+ GPRF+LKL ++ G
Sbjct: 231 -------QYKYVNKELELSE-------------------------VGPRFSLKLYQIKLG 258
Query: 365 TFDT-KGGEFEWVHKPEMDTSRRRFFL 390
T + K + EW+++P M+TS++R
Sbjct: 259 TLENIKAADTEWINRPYMNTSQKRLIF 285
>gi|346468039|gb|AEO33864.1| hypothetical protein [Amblyomma maculatum]
Length = 288
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 120/231 (51%), Gaps = 19/231 (8%)
Query: 56 HQKKVE-KRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPD------ETVCRPDDD 108
++K +E KRK ++ + K+ALE P + + R D E V +DD
Sbjct: 14 YRKSIEDKRKTIEEKKERLKQALEENRPIPYELREEALNLQRALDWDDPGGEGVVSQEDD 73
Query: 109 ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLK 168
E D PKI++TT R S++ F E+ + PNS RG Y++K
Sbjct: 74 EYRWAGVRD-----------PKIVVTTSRDPSSKLKQFAKEIRLIFPNSQRMNRGGYEMK 122
Query: 169 KIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH 228
++IE + + T IVVH R PD L++ LP GPTA+F + V+R DI N G +
Sbjct: 123 QLIEACRANEVTDFIVVHETRGNPDGLVVCHLPYGPTAYFTILNTVMRHDIPNIGTMSEA 182
Query: 229 IPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
P L+ +NF TRLG RV +++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 183 YPHLIFHNFKTRLGKRVMNILKYLFP-VPKEDSHRVITFANQDDYISFRHH 232
>gi|195573729|ref|XP_002104844.1| GD21170 [Drosophila simulans]
gi|194200771|gb|EDX14347.1| GD21170 [Drosophila simulans]
Length = 298
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 129/267 (48%), Gaps = 60/267 (22%)
Query: 126 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 184
GC PKI++TT S+R F+ EL +IPN+ RG Y L ++ + + T ++
Sbjct: 77 GCEDPKIMLTTSHNPSSRLKMFMKELRLIIPNAQQMNRGNYQLTTLMHACRANNVTDFLI 136
Query: 185 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 244
+H +R PD+L++ LP GPTA F +S +V+R DI + G+ + P L+ NNF T +G R
Sbjct: 137 IHEHRGIPDSLVVCHLPYGPTAFFNISDVVMRHDIPDIGHMSEQKPHLIFNNFKTPIGLR 196
Query: 245 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMK 304
++++ LFP P+ +RV++F N D I FRHH
Sbjct: 197 TVKILKHLFP-VPKENSQRVMSFLNHNDSIIFRHH------------------------- 230
Query: 305 AFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 364
+Y + KE + S+ GPRF+LKL ++ G
Sbjct: 231 -------QYKYVNKELELSE-------------------------VGPRFSLKLYQIKLG 258
Query: 365 TFDT-KGGEFEWVHKPEMDTSRRRFFL 390
T + K + EW+++P M+TS++R
Sbjct: 259 TLENIKAADTEWINRPYMNTSQKRLIF 285
>gi|402077343|gb|EJT72692.1| brix domain-containing protein [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 422
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 137/294 (46%), Gaps = 51/294 (17%)
Query: 109 ELFAGNDADEFSSILKQGC--APKILITTC-RFNSNRGPAFISELLSVIPNSHYYKRGT- 164
+L + A +F ++ +G PKIL+TT + +R I+ S+ PNSHY R
Sbjct: 168 DLTPASIARKFPTLFTEGPHPEPKILVTTSLKATIHREAGIIA---SLFPNSHYVPRSGH 224
Query: 165 -----YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
Y L+ I ++ + FT++++V ++++P L I LP+GPT HF ++ + +
Sbjct: 225 RYAHKYSLRDICKFGSNRGFTAVVMVREDQKKPTGLTIAHLPEGPTFHFTITNWIEGSKL 284
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
HGN G PEL+LN F T LG +L++ LFP PE GR V+T HNQRD++F R H
Sbjct: 285 PGHGNSQGFYPELLLNRFTTPLGLLTAQLLRRLFPYQPEIAGREVLTIHNQRDYLFVRRH 344
Query: 280 RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS 339
R + Y E R E D GK E
Sbjct: 345 R-------------------------YKYRERRQT----EKTVVDEEGK-------EIPG 368
Query: 340 QQKVITRLQECGPRFTLKL--VSLQHGTFDTKGGE-FEWVHKPEMDTSRRRFFL 390
V LQE GPRFTLKL V G + G + +W K M+ R +F L
Sbjct: 369 FTDVRVGLQEIGPRFTLKLRRVDKGIGRAGSDGDDAVQWEWKARMEKVRTKFNL 422
>gi|340507174|gb|EGR33184.1| u3 small nucleolar ribonucleoprotein protein, putative
[Ichthyophthirius multifiliis]
Length = 310
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 135/286 (47%), Gaps = 36/286 (12%)
Query: 106 DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTY 165
DD+ + N D+ + Q P ILITT R S R +F EL+S PNS RG
Sbjct: 54 DDNTIIPRNHIDD-EYAMAQYRDPMILITTSRSPSPRLISFQKELVSFFPNSERMNRGAT 112
Query: 166 DLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--G 223
+K ++++ +K+ T +++VH +R EPD ++I P GPT + + VLR DIKN
Sbjct: 113 VIKNLVQFCNQKNVTDLVIVHEHRGEPDGMIISHFPLGPTLYLGVKNCVLRHDIKNAKLD 172
Query: 224 NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVP 283
+ + P L+ +NF+T LG R+ + + LFP P+ ++V++F N D I RH
Sbjct: 173 SISQQNPHLIFHNFSTALGQRIMNIFKHLFP-IPKIDSKKVISFANNSDLISVRH----- 226
Query: 284 LEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKE--SKGSDANGKKAKDAKSEKTSQQ 341
C YE E S ++++ + EK+ +
Sbjct: 227 -----------------------CLYEKSDQNRLNEVVSFANNSDLISVRHCLYEKSDYK 263
Query: 342 KVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 387
V L E GPRF LK + GT D EWV +P M+T+ RR
Sbjct: 264 TV--ELNELGPRFELKPYQISLGTIDQTEATKEWVLRPYMNTATRR 307
>gi|71031849|ref|XP_765566.1| U3 small nuclear ribonucleoprotein [Theileria parva strain Muguga]
gi|68352523|gb|EAN33283.1| U3 small nuclear ribonucleoprotein, putative [Theileria parva]
Length = 302
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 126/258 (48%), Gaps = 54/258 (20%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKILITT R S+R F EL +IPNS RG+Y LK ++E+ + KD + +++++
Sbjct: 93 PKILITTSRNPSSRLTQFAKELCLIIPNSERLNRGSYILKDLVEFCRSKDVSDMVLIYET 152
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH-GNPTGHIPELVLNNFATRLGHRVGR 247
R P++++I LP GPTA+F+LS +VLR D+ + P L+ +NF + LG R+
Sbjct: 153 RGNPNSMIITHLPHGPTAYFQLSDVVLRHDLTEKLPTMSQAYPHLMFHNFTSPLGERIKD 212
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFC 307
+I+ +FP P R+++F N++D I FRHH +WT
Sbjct: 213 IIRYMFP-PPNTNETRIMSFINEKDKIIFRHH-----------VWT-------------- 246
Query: 308 YYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 367
K A KK L+E GPRF LK ++ GT D
Sbjct: 247 ------------EKKIGAEDKKVA---------------LKEIGPRFVLKPFKIELGTVD 279
Query: 368 TKGGEFEWVHKPEMDTSR 385
+ E EWV +P +T +
Sbjct: 280 MRDLETEWVLRPYFNTHK 297
>gi|340726760|ref|XP_003401721.1| PREDICTED: u3 small nucleolar ribonucleoprotein protein IMP4-like
[Bombus terrestris]
Length = 311
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 96/151 (63%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F+ EL + PNS RG Y++K++I + D T I+VH +
Sbjct: 94 PKIVITTSRDPSSRLKMFVKELRLIFPNSQRMNRGNYEMKQLIHACRANDVTDFIIVHEH 153
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P++L+I LP GPTA+F +S +++R DI + G + P L+ +NF T+LG RV +
Sbjct: 154 RGVPNSLIICHLPYGPTAYFTMSDVIMRHDIPDIGTMSEQYPHLIFHNFKTKLGERVMSI 213
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +R++TF N D+I FRHH
Sbjct: 214 LKYLFP-VPKEDSKRIITFANHDDYISFRHH 243
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTK-GGEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT D + + EW +P M+TS +R FL
Sbjct: 255 LVEVGPRFQLKLYQIKLGTLDAEAAADTEWALRPYMNTSHKRRFL 299
>gi|428183497|gb|EKX52355.1| hypothetical protein GUITHDRAFT_159282 [Guillardia theta CCMP2712]
Length = 288
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 153/336 (45%), Gaps = 81/336 (24%)
Query: 61 EKRKKLKARDAAEKRALELGEEPPARMTP------RTIENTREPDETVCRPDDDELFAGN 114
+K+KKLK +A+E G+ P + IE E E P DDE
Sbjct: 28 DKKKKLK-------QAIETGKPIPTELRAEEAELRHQIELDDERSEIPWDPMDDEYGRAG 80
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
+ D P+++++T R S+R F E+ + PNS RG Y K+I++
Sbjct: 81 EFD-----------PRVMVSTSRDPSSRLVQFAKEVCLLFPNSQRINRGNYTTKEIVDAC 129
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVL 234
+K + T +++VH +R EPD L+I +P GPTA F L +V R D+K + P L+
Sbjct: 130 RKNEVTDLVLVHEHRGEPDGLVITHMPHGPTAFFGLMNVVTRHDVKIKETISEAYPHLIF 189
Query: 235 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTI 294
+NF T+LG R +++ LFP P+ +RVVTF N+ DFI FRH +M+
Sbjct: 190 DNFTTKLGLRTQNILKHLFP-VPKDENKRVVTFANRNDFISFRH-----------HMY-- 235
Query: 295 LCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 354
EKTS ++V L+E GPRF
Sbjct: 236 -----------------------------------------EKTSHKEV--ELKELGPRF 252
Query: 355 TLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
++L ++ GT + + E+V++P + S+ + L
Sbjct: 253 EMRLFQIRLGTLEQTEAQNEYVYRPYLSNSKTKNLL 288
>gi|350421740|ref|XP_003492942.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Bombus impatiens]
Length = 311
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 96/151 (63%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F+ EL + PNS RG Y++K++I + D T I+VH +
Sbjct: 94 PKIVITTSRDPSSRLKMFVKELRLIFPNSQRMNRGNYEMKQLIHACRANDVTDFIIVHEH 153
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P++L+I LP GPTA+F +S +++R DI + G + P L+ +NF T+LG RV +
Sbjct: 154 RGVPNSLIICHLPYGPTAYFTMSDVIMRHDIPDIGTMSEQYPHLIFHNFKTKLGERVMSI 213
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +R++TF N D+I FRHH
Sbjct: 214 LKYLFP-VPKEDSKRIITFANHDDYISFRHH 243
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTK-GGEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT D + + EW +P M+TS +R FL
Sbjct: 255 LVEVGPRFQLKLYQIKLGTLDAEAAADTEWALRPYMNTSHKRRFL 299
>gi|336257693|ref|XP_003343670.1| hypothetical protein SMAC_08841 [Sordaria macrospora k-hell]
gi|380091903|emb|CCC10632.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 427
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 136/277 (49%), Gaps = 54/277 (19%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PK+L+TT + A ++ ++ PNS Y +R Y +++I ++AK + +T +
Sbjct: 190 PKVLVTTHLNGTIHKEA--EDIAAIFPNSTYIRRSAHAYGHKYSVREIAKFAKNRGYTIL 247
Query: 183 IVVHTNRREPDALLIIGL-----PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNF 237
++V + ++P +L II L GP+ + + + K + HGNPT H PEL+LN F
Sbjct: 248 MIVGEDLKKPSSLTIIHLNGEDVAPGPSLTYTIRNYLPGKALLGHGNPTNHYPELLLNGF 307
Query: 238 ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCS 297
T LG + + ++FP PE +GR+VVT HNQRD+IFFR H
Sbjct: 308 KTPLGILAAKSMHTMFPPKPELQGRQVVTLHNQRDYIFFRRH------------------ 349
Query: 298 YLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 357
RY+F +E++ ++ N A+ + E Q + LQE GPRFTLK
Sbjct: 350 --------------RYVF--REARATEKNVVTAEGKEME--GMQGIRAGLQEIGPRFTLK 391
Query: 358 LVSLQHGTFDTKGGEFE----WVHKPEMDTSRRRFFL 390
L + G G E E W K +M+ R RF L
Sbjct: 392 LRRVDKG-IGRAGSEGEDALKWEWKAKMEKVRTRFNL 427
>gi|307190874|gb|EFN74711.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Camponotus
floridanus]
Length = 311
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 126/243 (51%), Gaps = 33/243 (13%)
Query: 42 KNKEKRS-----AVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTR 96
K+K KRS +H L+ + + ++K++ DA + A+ +G E
Sbjct: 29 KDKLKRSLEENIPIHPDLR-KNALHVQRKIEWEDAGPQMAVAMGTEMGG----------- 76
Query: 97 EPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPN 156
+V +DDE D PKI+ITT R S+R F EL + PN
Sbjct: 77 ----SVANHEDDEYRWAGVED-----------PKIVITTSRDPSSRLKMFAKELRLIFPN 121
Query: 157 SHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLR 216
S RG Y++K+++ + D T I+VH +R PD L++ LP GPTA+F LS +++R
Sbjct: 122 SQRMNRGNYEMKQLVHACRANDVTDFIIVHEHRGVPDTLVVCHLPYGPTAYFTLSGVIMR 181
Query: 217 KDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFF 276
DI + G + P L+ +NF T+LG RV +++ LFP P+ +RV++F N D+I F
Sbjct: 182 HDIPDIGTMSEQYPHLIFHNFKTKLGARVMNILKYLFP-VPKEDSKRVISFANHDDYICF 240
Query: 277 RHH 279
RHH
Sbjct: 241 RHH 243
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
+ E GPRF +KL ++ GT DT+ + EW +P M+TS +R FL
Sbjct: 255 MTEVGPRFQMKLYEIKLGTLDTESTADTEWALRPYMNTSHKRRFL 299
>gi|331234240|ref|XP_003329780.1| hypothetical protein PGTG_11530 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309308770|gb|EFP85361.1| hypothetical protein PGTG_11530 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 511
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 118/248 (47%), Gaps = 55/248 (22%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHY-----YKRGTYDLKKIIEYAKKKDFTSII 183
P+ LITT S AFI EL + S K ++L ++ +A ++ + S++
Sbjct: 157 PRTLITTSPRPSEFTLAFIHELGGLFGGSRNCDIIPRKTKRFELTRVCRWACERGYGSMV 216
Query: 184 VVHT-----NRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFA 238
V+ NR P + I LP GPTA F+++ +V K I H PT H PELVL+NF+
Sbjct: 217 VIGEAHGGRNRSGPTHMTISRLPYGPTASFRMTSIVPSKAIPGHAKPTSHFPELVLSNFS 276
Query: 239 TRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSY 298
T LG +G L+QS+FP PE GR+VV+ NQRDF+FFR +R
Sbjct: 277 TPLGLSIGTLLQSVFPPLPELEGRQVVSMQNQRDFVFFRRYR------------------ 318
Query: 299 LTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 358
+ + E +F K + + TRLQE GPRFTLK+
Sbjct: 319 -------YVFAEREKVFLNK--------------------GDETIRTRLQEIGPRFTLKV 351
Query: 359 VSLQHGTF 366
L+ GT
Sbjct: 352 RWLKRGTL 359
>gi|383851297|ref|XP_003701170.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Megachile rotundata]
Length = 311
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 95/151 (62%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F EL + PNS RG Y++K++I + D T I+VH +
Sbjct: 94 PKIVITTSRDPSSRLKMFAKELRLIFPNSQRMNRGNYEMKQLIHACRANDVTDFIIVHEH 153
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD+L+I LP GPTA+F +S +V+R D+ + G + P L+ +NF T+LG RV +
Sbjct: 154 RGIPDSLIICHLPYGPTAYFTMSDVVMRHDVPDIGTMSEQYPHLIFHNFKTKLGTRVMSI 213
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +R++TF N D+I FRHH
Sbjct: 214 LKYLFP-VPKEDSKRIITFANHDDYISFRHH 243
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTK-GGEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT D + + EW +P M+T+ +R FL
Sbjct: 255 LTEVGPRFQLKLYEIKLGTLDAESAADVEWALRPYMNTTHKRRFL 299
>gi|430813984|emb|CCJ28728.1| unnamed protein product [Pneumocystis jirovecii]
Length = 272
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 112/251 (44%), Gaps = 56/251 (22%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKILITT R S + F E+ +IPNS RG Y + I+ + D T +I++H
Sbjct: 66 PKILITTSREPSTKLSQFAKEIKLLIPNSRRINRGNYVINDIVAACRSNDITDLIILHET 125
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD L+I P GPT F L ++LR DI N GN + P L++ N ++LG RV +
Sbjct: 126 RGVPDCLIISHFPYGPTVSFTLHNVILRHDIPNIGNVSESYPRLIMLNLTSKLGLRVKNV 185
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCY 308
+++LFP SP+ RV+TF NQ D+I RHH Y+ T
Sbjct: 186 LKALFPPSPKENSHRVITFANQEDYISLRHH---------VYLRT--------------- 221
Query: 309 YECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT 368
D+K+ L E GPR + L ++ GT D
Sbjct: 222 -----------------------DSKN---------IELVEVGPRLEMHLYEIKLGTIDM 249
Query: 369 KGGEFEWVHKP 379
+ EW KP
Sbjct: 250 PTADIEWRLKP 260
>gi|156555275|ref|XP_001603335.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Nasonia vitripennis]
Length = 312
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 95/151 (62%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F+ EL + PNS RG Y++K++I + D T I+VH +
Sbjct: 94 PKIVITTSRDPSSRLKMFVKELRLIFPNSQRMNRGNYEMKQLIHACRANDVTDFIIVHEH 153
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD+L+I LP GPTA+F +S +++R DI + G + P LV +NF T++G R +
Sbjct: 154 RGVPDSLVICHLPYGPTAYFTMSDVIMRHDIPDIGTMSEQYPHLVFHNFKTKIGLRAMSI 213
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +RV+TF N D+I FRHH
Sbjct: 214 LKYLFP-VPKEDSKRVITFANHDDYISFRHH 243
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEF-EWVHKPEMDTS-RRRFF 389
L E GPRF LKL ++ GT D EW +P M+TS +RRFF
Sbjct: 255 LSEVGPRFQLKLYEIKLGTLDAAAAADTEWALRPYMNTSHKRRFF 299
>gi|440298107|gb|ELP90748.1| brix domain containing protein C4F8.04, putative [Entamoeba
invadens IP1]
Length = 328
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 148/325 (45%), Gaps = 58/325 (17%)
Query: 54 LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE-TVCRPDDDELFA 112
KHQ+ + K L+ R + G+ R P TIE R DE TV +D E
Sbjct: 40 FKHQRAKNEHKMLRTR------LIRAGK--VKRQEPVTIEQKRIRDESTVDFKEDKEAVD 91
Query: 113 GNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 172
+ DEF++ QG +PKI++TT + F + V N+ Y+KRG +K I++
Sbjct: 92 DINEDEFTAYY-QGKSPKIIVTTTIKPNKVTNKFAIMMSHVFYNAKYFKRGYNTVKVIMK 150
Query: 173 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN-PTGHIP- 230
YA++ +T I++ + N + L +I LP GP+ HFK+ ++ + +++H + +P
Sbjct: 151 YAQRYGYTDIVICNDNHKTCTDLYVIHLPIGPSFHFKVFNIINPQQLQDHVRIASWKLPC 210
Query: 231 ELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCY 290
E + F TR G V R SLF Q P F GRRVVT H QRD+IFFRHH
Sbjct: 211 ECLTTGFETRTGIMVARQFNSLFSQKPMFTGRRVVTLHTQRDYIFFRHH----------- 259
Query: 291 MWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQEC 350
Y FE E + G V + E
Sbjct: 260 ---------------------IYQFEEAEDQFDKKKG--------------PVKCTIDEL 284
Query: 351 GPRFTLKLVSLQHGTFDTKGGEFEW 375
GPRF LKL ++Q GT +T E+ +
Sbjct: 285 GPRFVLKLRTIQKGTMNTINPEYIY 309
>gi|320168811|gb|EFW45710.1| U3 small nucleolar ribonucleoprotein IMP4 [Capsaspora owczarzaki
ATCC 30864]
Length = 293
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 106/189 (56%), Gaps = 17/189 (8%)
Query: 94 NTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSV 153
N E + + DD+ +AGN PKI++TT R S+R F EL +
Sbjct: 65 NVNEDAQGMEYQDDEYAYAGN------------VEPKIMLTTSRDPSSRLKMFAKELRGL 112
Query: 154 IPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKL 213
+PN+ RG Y LK+++ +K D T +I+VH +R EPD L+I +P GPTA+F LS +
Sbjct: 113 LPNTQKMNRGGYILKELVAACRKNDVTDLIIVHEHRGEPDGLVISHMPYGPTAYFALSNV 172
Query: 214 VLRKD---IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQ 270
V+R D + G P + P L+ NNF TRLG RV +++ LFP P+ RV+TF N
Sbjct: 173 VMRHDLPELTTAGMPEAY-PHLIFNNFNTRLGERVRNILKYLFP-VPKDDSSRVITFANT 230
Query: 271 RDFIFFRHH 279
D++ RHH
Sbjct: 231 DDYVSLRHH 239
>gi|37805976|dbj|BAC99390.1| putative U3 snoRNP protein IMP4 [Oryza sativa Japonica Group]
gi|215765881|dbj|BAG87578.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 293
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 156/341 (45%), Gaps = 81/341 (23%)
Query: 55 KHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTRE-----PDETVCRPDDDE 109
K ++ EK+++L+ AL+ G+ P + + RE D V R D+
Sbjct: 21 KERQHYEKKRRLRE-------ALDEGKPIPTELRNEELALRREIDLEDKDSAVPRSLIDD 73
Query: 110 LFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKK 169
+AG E PKIL+TT R S F+ EL V PNS RG + +
Sbjct: 74 EYAGAALRE----------PKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISE 123
Query: 170 IIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPT 226
I+E + D T +++VH +R +PD L++ LP GPTA+F L +V R DIK+ G +
Sbjct: 124 IVESCRSHDITDLVLVHEHRGQPDGLIVCHLPFGPTAYFGLLNVVTRHDIKDRKAMGKMS 183
Query: 227 GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEF 286
P L+L+NF T+ G R +++ LFP P+ +R++TF N+ D+I FRHH
Sbjct: 184 EAYPHLILDNFTTKTGERTANIVKHLFP-VPKPDSKRIITFANRDDYISFRHH------- 235
Query: 287 ISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITR 346
++E G K+ D
Sbjct: 236 ---------------------------VYEKH-------GGPKSLD-------------- 247
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 387
L+E GPRF L+L ++ GT D + E+V +P M+T++++
Sbjct: 248 LKEVGPRFELRLYQIKRGTVDQAEAQNEFVLRPYMNTAKKQ 288
>gi|321472015|gb|EFX82986.1| hypothetical protein DAPPUDRAFT_100907 [Daphnia pulex]
Length = 278
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 127/264 (48%), Gaps = 58/264 (21%)
Query: 129 PKILITTCRFN-SNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHT 187
PKI+ITT + S+R F+ EL V PNS +G Y++K++++ + T IVVH
Sbjct: 63 PKIMITTWSHDPSSRLKMFVKELKLVFPNSQRLNQGNYEMKQLLDACRANSVTDFIVVHE 122
Query: 188 NRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGR 247
+R +P+A++I LP GPTA+F +S +V+R DI + G + LV +N T LG RV
Sbjct: 123 HRGQPNAIIISHLPYGPTAYFNVSDVVMRHDIPDIGPMSEQYTHLVFHNMKTPLGQRVMN 182
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFC 307
+++ LFP P+ +RV+TF N DFI +RHH
Sbjct: 183 ILKYLFP-VPKEDSKRVITFANHDDFISYRHHTY-------------------------- 215
Query: 308 YYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 367
KG G + K E GPRF L+L L+ GT D
Sbjct: 216 ------------KKGEAGKGIELK-----------------EVGPRFQLRLYDLKLGTID 246
Query: 368 -TKGGEFEWVHKPEMDTSRRRFFL 390
+ EW ++P M+T+++R FL
Sbjct: 247 QADAADTEWAYRPYMNTTKKRRFL 270
>gi|367049750|ref|XP_003655254.1| hypothetical protein THITE_2118737 [Thielavia terrestris NRRL 8126]
gi|347002518|gb|AEO68918.1| hypothetical protein THITE_2118737 [Thielavia terrestris NRRL 8126]
Length = 429
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 130/277 (46%), Gaps = 54/277 (19%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKIL+TT + A E+ +++PN+ Y +R Y +++I ++AK + +T++
Sbjct: 192 PKILVTTGINGTIHKEA--QEIAALLPNATYIRRSAHRYAHKYSVREIAKFAKNRGYTAL 249
Query: 183 IVVHTNRREPDALLIIGL-----PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNF 237
+VVH + + P L + L P GPT + + + K I HGN T H PEL+LN F
Sbjct: 250 LVVHEDLKRPSQLSVCHLNSGDAPPGPTLTYTIRNYLPGKAIPGHGNATNHYPELLLNGF 309
Query: 238 ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCS 297
T LG + + LFP PE GR+VVT HNQRD+IFFR HR
Sbjct: 310 KTPLGLLAAKSMHMLFPPQPELAGRQVVTLHNQRDYIFFRRHR----------------- 352
Query: 298 YLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 357
+ + E R E A+G++ + K + LQE GPR TLK
Sbjct: 353 --------YVFREAR----PTEKNVVGADGREMEGVKGIRAG-------LQEIGPRMTLK 393
Query: 358 LVSLQHGTFDTKGGE----FEWVHKPEMDTSRRRFFL 390
L + G G E +W K +M+ R RF L
Sbjct: 394 LRRVDKG-IGRAGSEGDDALKWEWKAKMEKKRTRFNL 429
>gi|209731356|gb|ACI66547.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Salmo salar]
gi|221221716|gb|ACM09519.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Salmo salar]
gi|303660596|gb|ADM16000.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Salmo salar]
Length = 291
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 96/151 (63%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+++TT R S+R F+ E+ + P + RG +++K +++ K + T +++VH
Sbjct: 83 PKVMVTTSRDPSSRLKMFVKEVKLIFPGAQRMNRGGHEIKALVQACKANNVTDLVIVHET 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R +PD L++ LP GPTA+F L +V+R D+ + G + P L+ +NF++RLG RV +
Sbjct: 143 RGQPDGLVVCHLPFGPTAYFTLYNVVMRHDVPDIGTMSEAYPHLIFHNFSSRLGQRVSNI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RRV+TF NQ DFI FRHH
Sbjct: 203 LKYLFP-VPKEDSRRVITFANQEDFISFRHH 232
>gi|194742395|ref|XP_001953688.1| GF17886 [Drosophila ananassae]
gi|190626725|gb|EDV42249.1| GF17886 [Drosophila ananassae]
Length = 298
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 59/263 (22%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI++TT S+R F+ EL + PN+ RG Y L ++ + + T ++VH +
Sbjct: 81 PKIMLTTSHNPSSRLKLFMKELRLIFPNAQQMNRGNYQLTTLMHACRANNVTDFLIVHEH 140
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD+L++ LP GPTA F +S +++R DI + G+ + P L+ NNF T +G R ++
Sbjct: 141 RGIPDSLVVCHLPYGPTAFFNISDVIMRHDIPDIGHMSEQKPHLIFNNFKTPIGLRTVKI 200
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCY 308
++ LFP P+ +RV++F N D I FRHH
Sbjct: 201 LKHLFP-VPKENSQRVMSFLNHNDSIIFRHH----------------------------- 230
Query: 309 YECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT 368
+Y ++ KE L E GPRF LKL ++ GT +
Sbjct: 231 ---QYKYKNKE-------------------------LELSEVGPRFVLKLYQIKLGTLEN 262
Query: 369 -KGGEFEWVHKPEMDTSRRRFFL 390
K + EW+++P M+TS+++
Sbjct: 263 IKAADTEWINRPYMNTSQKKLIF 285
>gi|427785115|gb|JAA58009.1| Putative u3 small nucleolar ribonucleoprotein snornp component
[Rhipicephalus pulchellus]
Length = 300
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 120/231 (51%), Gaps = 19/231 (8%)
Query: 56 HQKKVE-KRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPD------ETVCRPDDD 108
++K +E KR+ ++ + K+ALE P + + R D E V +DD
Sbjct: 14 YRKSIEDKRRTIEEKKERLKQALEENRPIPYELREEALNLQRALDWDDPGGEGVVSHEDD 73
Query: 109 ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLK 168
E D PKI++TT R S++ F E+ + PN+ RG Y++K
Sbjct: 74 EYRWAGVRD-----------PKIVVTTSRDPSSKLKQFAKEIRLIFPNAQRMNRGGYEMK 122
Query: 169 KIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH 228
++IE + + T IVVH R PD L++ LP GPTA+F + V+R DI N G +
Sbjct: 123 QLIEACRANEVTDFIVVHETRGNPDGLVVCHLPYGPTAYFTILNTVMRHDIPNIGTMSEA 182
Query: 229 IPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
P L+ +NF TRLG RV +++ LFP P+ RVVTF NQ D+I FRHH
Sbjct: 183 YPHLIFHNFKTRLGKRVVNILKYLFP-VPKEDSHRVVTFANQDDYISFRHH 232
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 346 RLQECGPRFTLKLVSLQHGTFDTKGG-EFEWVHKPEMDTSRRRFFL 390
+LQE GPRF LKL ++ GT D + EW +P M+T+++R FL
Sbjct: 242 QLQEVGPRFELKLYEIKLGTLDAAAALDVEWSLRPYMNTAKKRRFL 287
>gi|384497215|gb|EIE87706.1| hypothetical protein RO3G_12417 [Rhizopus delemar RA 99-880]
Length = 285
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKILITT R S+R F E+ V PNS RG + +K+I+E + + T +I++H +
Sbjct: 82 PKILITTSRDPSSRLQQFSKEMRLVFPNSQRINRGGHVMKEIVEACRANEVTDLIILHEH 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R +PD +++ P GPTA+F L +VLR DIK+ G + P L+ NNF ++LG R+ +
Sbjct: 142 RGQPDGMVVCHFPYGPTAYFSLHNVVLRHDIKDQGTVSEAFPHLIFNNFNSKLGGRITNI 201
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
++ LFP P+ +RV+TF N D+I FRHH V
Sbjct: 202 LKYLFP-VPKDDSKRVMTFANDNDYISFRHHVYV 234
>gi|384485724|gb|EIE77904.1| hypothetical protein RO3G_02608 [Rhizopus delemar RA 99-880]
Length = 285
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKILITT R S+R F E+ V PNS RG + +K+I+E + + T +I++H +
Sbjct: 82 PKILITTSRDPSSRLQQFSKEMRLVFPNSQRINRGGHVMKEIVEACRANEVTDLIILHEH 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R +PD +++ P GPTA+F L +VLR DIK+ G + P L+ NNF ++LG R+ +
Sbjct: 142 RGQPDGMVVCHFPYGPTAYFSLHNVVLRHDIKDQGTVSEAFPHLIFNNFNSKLGGRITNI 201
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
++ LFP P+ +RV+TF N D+I FRHH V
Sbjct: 202 LKYLFP-VPKDDSKRVMTFANDNDYISFRHHVYV 234
>gi|442762987|gb|JAA73652.1| Putative u3 small nucleolar ribonucleoprotein snornp component,
partial [Ixodes ricinus]
Length = 325
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 120/231 (51%), Gaps = 19/231 (8%)
Query: 56 HQKKVE-KRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPD------ETVCRPDDD 108
++K +E KR+ ++ + K+ALE P + + + D E V +DD
Sbjct: 14 YRKSIEDKRRTIEEKKERLKQALEENRPIPYELRAEALALQEQLDWDDPGGEGVVSQEDD 73
Query: 109 ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLK 168
E D PKI++TT R S++ F E+ + PN+ RG Y++K
Sbjct: 74 EYRWAGVRD-----------PKIVVTTSRDPSSKLKQFAKEMRLIFPNAQRMNRGGYEMK 122
Query: 169 KIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH 228
++IE + + T IVVH R PD L+I LP GPTA+F + V+R DI N G +
Sbjct: 123 QLIEACRANEVTDFIVVHETRGNPDGLVICHLPYGPTAYFTILNTVMRHDIPNIGTMSEA 182
Query: 229 IPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
P L+ +NF TRLG RV +++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 183 YPHLIFHNFKTRLGKRVTNILKYLFP-VPKEDSHRVITFANQDDYISFRHH 232
>gi|325181825|emb|CCA16280.1| U3 small nucleolar ribonucleoprotein protein IMP4 p [Albugo
laibachii Nc14]
Length = 784
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI ITT R S+R F EL +IPN+ RGT+ + ++E A+ +F+ +I+V
Sbjct: 581 PKIAITTSRDPSSRLKQFAQELRVIIPNAIRLNRGTHTIINLVESARSNEFSDLILVTET 640
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R EPD L++ LP GPTA+F LS VLR DI++ + P L+LN F T LG RV +
Sbjct: 641 RGEPDGLVVCHLPFGPTAYFSLSNTVLRHDIEDRATISEAYPHLILNQFETVLGRRVANI 700
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +RV+TF N DFI FRHH
Sbjct: 701 LKHLFP-VPKPDSKRVITFANDHDFISFRHH 730
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 387
L ECGPRF L+L ++ GT D K E EWV +P M++++ R
Sbjct: 741 LSECGPRFELQLYQIKLGTCDQKEAENEWVLRPYMNSAKNR 781
>gi|15222534|ref|NP_176564.1| Ribosomal RNA processing Brix domain protein [Arabidopsis thaliana]
gi|12324948|gb|AAG52427.1|AC011622_15 putative U3 small nucleolar ribonucleoprotein protein; 1537-3735
[Arabidopsis thaliana]
gi|12325007|gb|AAG52449.1|AC010852_6 putative U3 small nucleolar ribonucleoprotein protein; 73469-75667
[Arabidopsis thaliana]
gi|20260206|gb|AAM13001.1| putative U3 small nucleolar ribonucleoprotein protein [Arabidopsis
thaliana]
gi|21387041|gb|AAM47924.1| putative U3 small nucleolar ribonucleoprotein protein [Arabidopsis
thaliana]
gi|21593725|gb|AAM65692.1| putative U3 small nucleolar ribonucleoprotein [Arabidopsis
thaliana]
gi|332196027|gb|AEE34148.1| Ribosomal RNA processing Brix domain protein [Arabidopsis thaliana]
Length = 294
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 101/176 (57%), Gaps = 15/176 (8%)
Query: 107 DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD 166
DDE +AD PKIL+TT R S F EL V PNS RG+
Sbjct: 72 DDEYANATEAD-----------PKILLTTSRNPSAPLIRFTKELKFVFPNSQRINRGSQV 120
Query: 167 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI---KNHG 223
+ +IIE A+ DFT +I+VH +R PD L+I LP GPTA+F L +V R DI K+ G
Sbjct: 121 ISEIIETARSHDFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHDISDKKSIG 180
Query: 224 NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
P L+ NNF T++G RVG +++ +FP +P+ +R+VTF NQ D+I FR+H
Sbjct: 181 KMPEQYPHLIFNNFTTQMGQRVGNILKHIFP-APKLDAKRIVTFSNQSDYISFRNH 235
>gi|240973534|ref|XP_002401491.1| U3 small nucleolar ribonucleoprotein imp4, putative [Ixodes
scapularis]
gi|215491032|gb|EEC00673.1| U3 small nucleolar ribonucleoprotein imp4, putative [Ixodes
scapularis]
Length = 317
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 120/231 (51%), Gaps = 19/231 (8%)
Query: 56 HQKKVE-KRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPD------ETVCRPDDD 108
++K +E KR+ ++ + K+ALE P + + + D E V +DD
Sbjct: 14 YRKSIEDKRRTIEEKKERLKQALEENRPIPYELRAEALALQEQLDWDDPGGEGVVSQEDD 73
Query: 109 ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLK 168
E D PKI++TT R S++ F E+ + PN+ RG Y++K
Sbjct: 74 EYRWAGVRD-----------PKIVVTTSRDPSSKLKQFAKEMRLIFPNAQRMNRGGYEMK 122
Query: 169 KIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH 228
++IE + + T IVVH R PD L+I LP GPTA+F + V+R DI N G +
Sbjct: 123 QLIEACRANEVTDFIVVHETRGNPDGLVICHLPYGPTAYFTILNTVMRHDIPNIGTMSEA 182
Query: 229 IPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
P L+ +NF TRLG RV +++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 183 YPHLIFHNFKTRLGKRVTNILKYLFP-VPKEDSHRVITFANQDDYISFRHH 232
>gi|347970855|ref|XP_308117.4| AGAP003890-PA [Anopheles gambiae str. PEST]
gi|333466404|gb|EAA03875.4| AGAP003890-PA [Anopheles gambiae str. PEST]
Length = 313
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 153/347 (44%), Gaps = 85/347 (24%)
Query: 45 EKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCR 104
E+ +H LK + + ++KLK D KRA E+G T
Sbjct: 37 EEHIPIHGDLK-KDALALQEKLKWTDEGPKRAAEIG-------------GISGGANTADS 82
Query: 105 PDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 164
DD+ +AG + PKI+ITT R S+R F+ EL + PN+ RG
Sbjct: 83 KDDEYRYAGCED------------PKIMITTSRDPSSRLVQFVKELRLIFPNAQRMNRGN 130
Query: 165 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 224
+++K+++ + + T IVVH + PD L+I LP GPTA F +S +V+R DI + G
Sbjct: 131 FEMKQLVHACRANNVTDFIVVHEHSGVPDNLVICHLPYGPTASFNISGVVMRHDIPDIGT 190
Query: 225 PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPL 284
+ P L+ +NF T+L R +++ LFP P+ +RV+TF N D
Sbjct: 191 MSEQKPHLIFHNFKTKLAERTMSILRYLFP-VPKEDSKRVMTFANHDD------------ 237
Query: 285 EFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVI 344
FIS F ++ R + + E
Sbjct: 238 -FIS-----------------FRHHTFRMVDKQLE------------------------- 254
Query: 345 TRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 390
L ECGPRF LKL ++ GT D + EWV++P M+T+ +R FL
Sbjct: 255 --LTECGPRFQLKLYQIKLGTVDELDAADTEWVYRPYMNTAAKRRFL 299
>gi|326492666|dbj|BAJ90189.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326493716|dbj|BAJ85319.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326500000|dbj|BAJ90835.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 293
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 147/322 (45%), Gaps = 74/322 (22%)
Query: 74 KRALELGEEPPARMTPRTIENTRE-----PDETVCRPDDDELFAGNDADEFSSILKQGCA 128
+ ALE G+ P + + RE D V R D+ +AG E
Sbjct: 33 REALEEGKPIPTELRNEELALRREIDLDDQDRAVPRSIIDDEYAGATLRE---------- 82
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKIL+TT R S F+ EL V PNS RG + +I+E + + T +I+VH +
Sbjct: 83 PKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCRSHEITDLILVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELVLNNFATRLGHRV 245
R +PD L++ LP GPTA+F L +V R DIK+ G + P L+L+NF T+ G R
Sbjct: 143 RGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMGKMSEAYPHLILDNFTTKTGERT 202
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKA 305
+++ LFP P+ +R++TF N+ D+I FRHH
Sbjct: 203 ANIMKHLFP-VPKPDSKRLITFANRDDYISFRHH-------------------------- 235
Query: 306 FCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT 365
I+E G K+ D L+E GPRF L+L ++ GT
Sbjct: 236 --------IYEKH-------GGPKSID--------------LKEVGPRFELRLYQIKRGT 266
Query: 366 FDTKGGEFEWVHKPEMDTSRRR 387
D + E+V +P M+T++++
Sbjct: 267 VDQSEAQNEFVLRPYMNTAKKQ 288
>gi|225712572|gb|ACO12132.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Lepeophtheirus
salmonis]
Length = 310
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 96/151 (63%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+++TT R S+R F+ E+ ++PNS RG Y+ K++++ + + T +++VH +
Sbjct: 95 PKVMLTTSRDPSSRLKKFVKEIKLLVPNSQRINRGNYEFKQLMDACRANEVTDVVIVHEH 154
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD L++ LP GPTA+F LS +V+R DI GN + P LV +NF ++LG R +
Sbjct: 155 RGNPDGLIVCHLPFGPTAYFTLSDIVMRHDIPELGNMSEQYPHLVFHNFKSKLGERCTNI 214
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +RV+TF N D+I FRHH
Sbjct: 215 LKYLFP-VPKEDSKRVMTFANHDDYISFRHH 244
>gi|219362803|ref|NP_001136548.1| uncharacterized protein LOC100216667 [Zea mays]
gi|194696132|gb|ACF82150.1| unknown [Zea mays]
gi|413934739|gb|AFW69290.1| hypothetical protein ZEAMMB73_385841 [Zea mays]
gi|413934740|gb|AFW69291.1| hypothetical protein ZEAMMB73_385841 [Zea mays]
gi|413934741|gb|AFW69292.1| hypothetical protein ZEAMMB73_385841 [Zea mays]
Length = 293
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 130/262 (49%), Gaps = 59/262 (22%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKIL+TT R S F+ EL V PNS RG + +I+E + D T +I+VH +
Sbjct: 83 PKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVEACRSHDITDLILVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELVLNNFATRLGHRV 245
R +PD L++ LP GPTA+F L +V R DIK+ G + P L+L+NF+T++G R
Sbjct: 143 RGQPDGLIVSHLPHGPTAYFGLLNVVTRHDIKDRKTMGKMSEAYPHLILDNFSTQIGERT 202
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKA 305
+++ LFP P+ +R++TF N+ D+I FRHH
Sbjct: 203 ATILKHLFP-VPKPDSKRIITFANRDDYISFRHH-------------------------- 235
Query: 306 FCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT 365
++E G K+ D L+E GPRF L+L ++ GT
Sbjct: 236 --------VYE-------KPGGPKSID--------------LKEVGPRFELRLYQIKLGT 266
Query: 366 FDTKGGEFEWVHKPEMDTSRRR 387
+ K + E+V +P ++T++++
Sbjct: 267 VEQKEAQSEFVLRPYINTAKKQ 288
>gi|225719840|gb|ACO15766.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Caligus
clemensi]
Length = 310
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 104/180 (57%), Gaps = 13/180 (7%)
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
ET DD+ +AG PK+++TT R S+R F+ E+ +IPNS
Sbjct: 78 ETRSSQDDEYAWAG------------VADPKVMLTTSRDPSSRLKKFVKEIKLLIPNSQR 125
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
RG ++ K++++ + + T I++VH NR PD L++ LP GPTA+F LS +V+R D+
Sbjct: 126 INRGNHEFKQLVDACRANEVTDIVIVHENRGNPDGLIVCHLPFGPTAYFTLSDIVMRHDV 185
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+ G+ + P L+ +NF + LG R +++ LFP P+ +RV+TF N DFI FRHH
Sbjct: 186 PDLGSMSEQYPHLIFHNFKSNLGERCMNILKYLFP-VPKEESKRVMTFANHDDFISFRHH 244
>gi|197632087|gb|ACH70767.1| U3 small nucleolar ribonucleoprotein [Salmo salar]
gi|209733470|gb|ACI67604.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Salmo salar]
Length = 291
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 95/151 (62%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+++TT R S+R F+ E+ + P + RG +++ +++ K + T +++VH
Sbjct: 83 PKVMVTTSRDPSSRLKMFVKEVKLIFPGAQRMNRGGHEINALVQACKANNVTDLVIVHET 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R +PD L++ LP GPTA+F L +V+R D+ + G + P L+ +NF++RLG RV +
Sbjct: 143 RGQPDGLVVCHLPFGPTAYFTLYNVVMRHDVPDIGTMSEAYPHLIFHNFSSRLGQRVSNI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RRVVTF NQ DFI FRHH
Sbjct: 203 LKYLFP-VPKEDSRRVVTFANQEDFISFRHH 232
>gi|167515528|ref|XP_001742105.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778729|gb|EDQ92343.1| predicted protein [Monosiga brevicollis MX1]
Length = 286
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 119/219 (54%), Gaps = 13/219 (5%)
Query: 61 EKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFS 120
EK+++LKA AL+ G+ P+ + E ++ D DD + D +
Sbjct: 27 EKKQRLKA-------ALDAGKSIPSDLRGEAAELQKKLDY-----DDQNTNSYKDVRDDE 74
Query: 121 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 180
PK+++TT R S+R F EL + PNS RG + + ++++ + D T
Sbjct: 75 YRWAGSKDPKVMLTTSRDPSSRLKQFAKELKLIFPNSQRLNRGGHVMSEMVDVCRANDVT 134
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 240
+++VH +R +PD L++ LP GPTA+F+L+ +V+R DI N G + P L+ + F+T
Sbjct: 135 DLVIVHEHRGQPDGLIVSHLPYGPTAYFQLANVVMRHDIPNAGTMSEAFPHLIFHGFSTA 194
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
LG R +++ LFP P+ +RV+TF N DFI FRHH
Sbjct: 195 LGERATSILKYLFP-VPKDESKRVITFANDADFISFRHH 232
>gi|325181241|emb|CCA15655.1| U3 small nucleolar ribonucleoprotein protein IMP4 p [Albugo
laibachii Nc14]
Length = 287
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI ITT R S+R F EL +IPN+ RGT+ + ++E A+ +F+ +I+V
Sbjct: 84 PKIAITTSRDPSSRLKQFAQELRVIIPNAIRLNRGTHTIINLVESARSNEFSDLILVTET 143
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R EPD L++ LP GPTA+F LS VLR DI++ + P L+LN F T LG RV +
Sbjct: 144 RGEPDGLVVCHLPFGPTAYFSLSNTVLRHDIEDRATISEAYPHLILNQFETVLGRRVANI 203
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +RV+TF N DFI FRHH
Sbjct: 204 LKHLFP-VPKPDSKRVITFANDHDFISFRHH 233
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L ECGPRF L+L ++ GT D K E EWV +P M++++ R L
Sbjct: 244 LSECGPRFELQLYQIKLGTCDQKEAENEWVLRPYMNSAKNRNHL 287
>gi|229367592|gb|ACQ58776.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Anoplopoma
fimbria]
Length = 291
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 117/220 (53%), Gaps = 15/220 (6%)
Query: 61 EKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDEL-FAGNDADEF 119
EK++KLK E R L A + +E E E V DDE +AG +
Sbjct: 27 EKKQKLKGA-LEENRLLPTEVRKDALQLQKLLEYDDEGAEGVSSHMDDEYKWAGVED--- 82
Query: 120 SSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDF 179
PK+++TT R S+R F E+ + P + RG +++ ++ K +
Sbjct: 83 ---------PKVMVTTSRDPSSRLKMFSKEVKLMFPGAQRMNRGNHEINSLVRACKANNV 133
Query: 180 TSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFAT 239
T +++VH R +PD L++ LP GPTA+F L +V+R D+ + G + P L+LNNF++
Sbjct: 134 TDLVIVHETRGQPDGLVVCHLPFGPTAYFTLYNVVMRHDVPDIGTMSEAYPHLILNNFSS 193
Query: 240 RLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
RLG RV +++ LFP E G RV+TF NQ DFI FRHH
Sbjct: 194 RLGSRVSNILKYLFPVPKEDSG-RVITFANQEDFISFRHH 232
>gi|169642518|gb|AAI60494.1| LOC549383 protein [Xenopus (Silurana) tropicalis]
Length = 291
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 121/233 (51%), Gaps = 15/233 (6%)
Query: 47 RSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPD 106
R A AKL +E +K+ R E R + A + +E E E V
Sbjct: 15 RKAQEAKLH---SIEDKKERLKRALEENRLIPTEIRREALTLQKQLEFDDEGGEGVSSHM 71
Query: 107 DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD 166
DDE AD PKI++TT R S+R F E+ + PN+ RG ++
Sbjct: 72 DDEYKWAGVAD-----------PKIMVTTSRDPSSRLKIFAKEMRLIFPNAQRMNRGKHE 120
Query: 167 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT 226
+ +++ + D T +++VH +R PD L++ LP GPTA+F L +V+R DI + G +
Sbjct: 121 VGALVQACRANDVTDLLIVHEHRGMPDGLIVCHLPFGPTAYFTLCNVVMRHDIPDLGTMS 180
Query: 227 GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
P L+ +NF++RLG RV +++ LFP P+ +RV+TF NQ D+I FRHH
Sbjct: 181 EAHPHLIFHNFSSRLGQRVADIMKYLFP-VPKEESKRVITFANQDDYISFRHH 232
>gi|403357744|gb|EJY78503.1| hypothetical protein OXYTRI_24339 [Oxytricha trifallax]
Length = 288
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+L+TT R S R F E+ +IPNS RG Y LK +++ + + T +I++H
Sbjct: 83 PKVLVTTSRSASQRLMQFQKEMKLIIPNSVRINRGNYVLKDLVKICQVNNITDLIILHET 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH-IPELVLNNFATRLGHRVGR 247
R EPD +++ +P GPTA+F +S +VLR D+K+ +P P L+L NF T+LG R+
Sbjct: 143 RGEPDGMIVSHMPYGPTAYFGMSNVVLRHDLKDKVDPVSEAYPHLILQNFNTKLGDRISD 202
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ +FP P+ +RV+TF N+ DFI FRHH
Sbjct: 203 ILKYIFP-LPKVDSKRVMTFVNEDDFISFRHH 233
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L+E GPRF +K + GT D + + EWV +P M+T+++R +L
Sbjct: 245 LKELGPRFEMKPYQIVLGTVDLQDAQKEWVLRPYMNTAKKRAYL 288
>gi|222639934|gb|EEE68066.1| hypothetical protein OsJ_26077 [Oryza sativa Japonica Group]
Length = 261
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 130/264 (49%), Gaps = 63/264 (23%)
Query: 129 PKILITTCRFNSNRGP--AFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVH 186
PKIL+TT R + RGP F+ EL V PNS RG + +I+E + D T +++VH
Sbjct: 51 PKILLTTSR--NPRGPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCRSHDITDLVLVH 108
Query: 187 TNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELVLNNFATRLGH 243
+R +PD L++ LP GPTA+F L +V R DIK+ G + P L+L+NF T+ G
Sbjct: 109 EHRGQPDGLIVCHLPFGPTAYFGLLNVVTRHDIKDRKAMGKMSEAYPHLILDNFTTKTGE 168
Query: 244 RVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIM 303
R +++ LFP P+ +R++TF N+ D+I FRHH
Sbjct: 169 RTANIVKHLFP-VPKPDSKRIITFANRDDYISFRHH------------------------ 203
Query: 304 KAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQH 363
++E G K+ D L+E GPRF L+L ++
Sbjct: 204 ----------VYEKH-------GGPKSLD--------------LKEVGPRFELRLYQIKR 232
Query: 364 GTFDTKGGEFEWVHKPEMDTSRRR 387
GT D + E+V +P M+T++++
Sbjct: 233 GTVDQAEAQNEFVLRPYMNTAKKQ 256
>gi|312373784|gb|EFR21471.1| hypothetical protein AND_17009 [Anopheles darlingi]
Length = 313
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 119/230 (51%), Gaps = 27/230 (11%)
Query: 50 VHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDE 109
+H LK + +E ++KLK D KRA E+ E TV DD+
Sbjct: 42 IHGDLK-KDALELQEKLKWTDEGPKRAAEISGESGGA-------------NTVDSKDDEY 87
Query: 110 LFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKK 169
+AG + PKI+ITT R S+R F+ EL + PN+ RG ++ K+
Sbjct: 88 RYAGCED------------PKIMITTSRDPSSRLKQFVKELRLIFPNAQRMNRGNFETKQ 135
Query: 170 IIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI 229
++ + + T I+VH +R PD L+I LP GPTA F +S +V+R DI + G +
Sbjct: 136 LVHACRANNVTDFIIVHEHRGVPDNLIICHLPYGPTASFNMSGVVMRHDIPDIGPMSEQK 195
Query: 230 PELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
P LV +NF T+L R +++ LFP P+ +RV+TF N DFI FRHH
Sbjct: 196 PHLVFHNFKTKLAERTMSILRYLFP-VPKEDSKRVITFANHDDFISFRHH 244
>gi|429328789|gb|AFZ80549.1| U3 small nucleolar ribonucleoprotein, putative [Babesia equi]
Length = 293
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 131/257 (50%), Gaps = 56/257 (21%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+LITT R S+R F E+ +IPNS RG+Y LK ++++ + KD + I++++ +
Sbjct: 83 PKVLITTSRNPSSRLSQFAKEMRLIIPNSERLNRGSYILKDLVDFCRAKDVSDIVLLYEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH--IPELVLNNFATRLGHRVG 246
R +PDA+++ LP GPT++F+LS ++LR D+ PT P L+ +NF ++LG+R
Sbjct: 143 RGKPDAMVVSHLPHGPTSYFQLSDVILRHDLPE-SPPTMSEAYPHLIFHNFTSQLGNRFK 201
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAF 306
+++ LFP RV++F N+ D IFFRHH +W
Sbjct: 202 DILRYLFPPQ-NTNETRVLSFINKADRIFFRHH-----------VWN------------- 236
Query: 307 CYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 366
ETK G+D K +T L E GPRFTLK ++ GT
Sbjct: 237 ---------ETK--IGAD----------------DKNVT-LTEIGPRFTLKPFKIELGTV 268
Query: 367 DTKGGEFEWVHKPEMDT 383
D + E EW +P +T
Sbjct: 269 DMRDLEVEWTLRPYFNT 285
>gi|115474843|ref|NP_001061018.1| Os08g0155000 [Oryza sativa Japonica Group]
gi|37805975|dbj|BAC99389.1| putative U3 snoRNP protein IMP4 [Oryza sativa Japonica Group]
gi|113622987|dbj|BAF22932.1| Os08g0155000 [Oryza sativa Japonica Group]
Length = 249
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 127/262 (48%), Gaps = 59/262 (22%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKIL+TT R S F+ EL V PNS RG + +I+E + D T +++VH +
Sbjct: 39 PKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCRSHDITDLVLVHEH 98
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELVLNNFATRLGHRV 245
R +PD L++ LP GPTA+F L +V R DIK+ G + P L+L+NF T+ G R
Sbjct: 99 RGQPDGLIVCHLPFGPTAYFGLLNVVTRHDIKDRKAMGKMSEAYPHLILDNFTTKTGERT 158
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKA 305
+++ LFP P+ +R++TF N+ D+I FRHH
Sbjct: 159 ANIVKHLFP-VPKPDSKRIITFANRDDYISFRHH-------------------------- 191
Query: 306 FCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT 365
++E G K+ D L+E GPRF L+L ++ GT
Sbjct: 192 --------VYEKH-------GGPKSLD--------------LKEVGPRFELRLYQIKRGT 222
Query: 366 FDTKGGEFEWVHKPEMDTSRRR 387
D + E+V +P M+T++++
Sbjct: 223 VDQAEAQNEFVLRPYMNTAKKQ 244
>gi|62860108|ref|NP_001016629.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog [Xenopus
(Silurana) tropicalis]
gi|89269525|emb|CAJ82846.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
[Xenopus (Silurana) tropicalis]
Length = 291
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 120/233 (51%), Gaps = 15/233 (6%)
Query: 47 RSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPD 106
R A AKL +E +K R E R + A + +E E E V
Sbjct: 15 RKAQEAKLH---SIEDKKMRLKRALEENRLIPTEIRREALTLQKQLEFDDEGGEGVSSHM 71
Query: 107 DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD 166
DDE AD PKI++TT R S+R F E+ + PN+ RG ++
Sbjct: 72 DDEYKWAGVAD-----------PKIMVTTSRDPSSRLKIFAKEMRLIFPNAQRMNRGKHE 120
Query: 167 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT 226
+ +++ + D T +++VH +R PD L++ LP GPTA+F L +V+R DI + G +
Sbjct: 121 VGALVQACRANDVTDLLIVHEHRGMPDGLIVCHLPFGPTAYFTLCNVVMRHDIPDLGTMS 180
Query: 227 GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
P L+ +NF++RLG RV +++ LFP P+ +RV+TF NQ D+I FRHH
Sbjct: 181 EAHPHLIFHNFSSRLGQRVADIMKYLFP-VPKEESKRVITFANQDDYISFRHH 232
>gi|300121337|emb|CBK21717.2| unnamed protein product [Blastocystis hominis]
Length = 290
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 122/262 (46%), Gaps = 57/262 (21%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+ +TT R S+R FI E+ +IPNS RG L ++++ + +FT I++V+ +
Sbjct: 83 PKVCVTTSRDPSSRLKMFIKEIKLIIPNSQRINRGASKLDELVKACRANNFTDIVIVNEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R EP +L++ LP GPTA+F ++ V+R DI+N G + P L+ +N ++LG RV +
Sbjct: 143 RGEPTSLIVSHLPYGPTAYFSITNTVMRHDIENVGTMSEAYPHLIFSNLTSKLGERVTNI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCY 308
++ LFP P +R++TF NQ DFI FRHH +YL K
Sbjct: 203 LKHLFP-VPRPDSKRILTFANQNDFISFRHH-----------------TYLKEDHKTVAL 244
Query: 309 YECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT 368
E GPRF L+ ++ GT D
Sbjct: 245 TEV---------------------------------------GPRFELRPYQIRLGTVDQ 265
Query: 369 KGGEFEWVHKPEMDTSRRRFFL 390
+ E EW+ +TSR+ L
Sbjct: 266 EEAENEWILHQYTNTSRKHKLL 287
>gi|242096898|ref|XP_002438939.1| hypothetical protein SORBIDRAFT_10g028620 [Sorghum bicolor]
gi|241917162|gb|EER90306.1| hypothetical protein SORBIDRAFT_10g028620 [Sorghum bicolor]
Length = 293
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 129/262 (49%), Gaps = 59/262 (22%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKIL+TT R S F+ EL V PNS RG + +I+E + D T +I+VH +
Sbjct: 83 PKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCRSHDITDLILVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELVLNNFATRLGHRV 245
R +PD L++ LP GPTA+F L +V R DIK+ G + P L+L+NF+T++G R
Sbjct: 143 RGQPDGLIVSHLPHGPTAYFGLLNVVTRHDIKDRKTMGKMSEAYPHLILDNFSTQIGERT 202
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKA 305
+++ LFP P+ +R++TF N+ D+I FRHH
Sbjct: 203 ATILKHLFP-VPKPDSKRIITFANRDDYISFRHH-------------------------- 235
Query: 306 FCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT 365
++E G K+ D L+E GPRF L+L ++ GT
Sbjct: 236 --------VYE-------KPGGPKSID--------------LKEVGPRFELRLYQIKLGT 266
Query: 366 FDTKGGEFEWVHKPEMDTSRRR 387
+ + E+V +P ++T++++
Sbjct: 267 VEQNEAQSEFVLRPYINTAKKQ 288
>gi|221487354|gb|EEE25586.1| U3 small nucleolar ribonucleoprotein, putative [Toxoplasma gondii
GT1]
Length = 314
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 155/328 (47%), Gaps = 53/328 (16%)
Query: 61 EKRKKLKARDAAEKRALELGEEPPA--------RMTPRTIENTREPDETVCRPDDDELFA 112
EK + L R K ALE G+ P+ ++ P +T DD+ +A
Sbjct: 20 EKARVLADRKKRLKEALETGKAVPSDLRGEAGQKLLPTLDLEDVNTAQTTTHIDDEYAYA 79
Query: 113 GNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 172
G + PK+++TT R S+R F+ EL +IPNS RG Y + ++E
Sbjct: 80 GVED------------PKVVLTTSRNPSSRLQQFVKELRLLIPNSQRINRGGYVVNDLVE 127
Query: 173 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPE 231
+ + T +I++H +R +PDA+++ LP GP A+F LS + LR D+ + N + P
Sbjct: 128 LCRSNNVTDLIIIHEHRGQPDAMVVCHLPHGPAAYFNLSGVALRHDLPEKPANMSEAAPH 187
Query: 232 LVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYM 291
LV +NF +R+G RV +++ L+P + +RV F N D I FRH Y
Sbjct: 188 LVFHNFTSRVGLRVMNVLKFLYPPANPI-AQRVQAFVNVGDEIHFRH-----------YT 235
Query: 292 WTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECG 351
WT + R K S S+ G + DA+ E++S++K L E G
Sbjct: 236 WT----------------DNR----KKTSGASNTPGSSSADAEEEESSEKKGHLELVEVG 275
Query: 352 PRFTLKLVSLQHGTFDTKGGEFEWVHKP 379
PRFTLK + GT + K E EW +P
Sbjct: 276 PRFTLKPYRIDLGTAEMKDVETEWAVRP 303
>gi|148227362|ref|NP_001084730.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog [Xenopus
laevis]
gi|46329757|gb|AAH68917.1| MGC83136 protein [Xenopus laevis]
Length = 291
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F E+ + PN+ RG +++ +++ + D T +++VH
Sbjct: 83 PKIMITTSRDPSSRLKIFAKEMRLIFPNAQRMNRGKHEVGALVQACRANDVTDLLIVHET 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD L++ LP GPTA+F L +V+R DI + G + P L+ +NF +RLG RV +
Sbjct: 143 RGMPDGLIVCHLPFGPTAYFTLCNVVMRHDIPDLGTMSEANPHLIFHNFTSRLGQRVADI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +RVVTF NQ D+I FRHH
Sbjct: 203 MKYLFP-VPKDESKRVVTFANQDDYISFRHH 232
>gi|357144981|ref|XP_003573481.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Brachypodium distachyon]
Length = 293
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 147/322 (45%), Gaps = 74/322 (22%)
Query: 74 KRALELGEEPPARMTPRTIENTRE-----PDETVCRPDDDELFAGNDADEFSSILKQGCA 128
+ ALE G+ P + + RE D V R D+ +AG E
Sbjct: 33 REALEEGKPIPTELRNEELALRREIDLDDQDRAVPRSIIDDEYAGAALRE---------- 82
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKIL+TT R S F+ EL V PNS RG + +I+E + + T +I+VH +
Sbjct: 83 PKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCRSHEITDLILVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELVLNNFATRLGHRV 245
R +PD L++ LP GPTA+F L +V R DIK+ G + P L+L+NF T+ G R
Sbjct: 143 RGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMGKMSEAYPHLILDNFTTKTGERT 202
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKA 305
+++ LFP P+ +R++TF N+ D+I FRHH
Sbjct: 203 ANIMKHLFP-VPKPDSKRLITFANRDDYISFRHH-------------------------- 235
Query: 306 FCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT 365
I+E G K+ D L+E GPRF L+L ++ GT
Sbjct: 236 --------IYEKH-------GGPKSID--------------LKEVGPRFELRLYQIKRGT 266
Query: 366 FDTKGGEFEWVHKPEMDTSRRR 387
D + E+V +P ++T++++
Sbjct: 267 VDQSEAQNEFVLRPYINTAKKQ 288
>gi|440801245|gb|ELR22265.1| U3 small nucleolar ribonucleoprotein component, putative
[Acanthamoeba castellanii str. Neff]
Length = 277
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 61 EKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRP--DDDELFAGNDADE 118
EKRK+LK A++ G P+ + +E +E R DD F + DE
Sbjct: 15 EKRKRLKT-------AIDAGRNIPSDLL-------KEQEELRERMPYDDPAKFEQSIDDE 60
Query: 119 FSSILKQGC-APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKK 177
++ + G PK++ITT R S+R F+ EL V PN+ RG Y LK+++E +
Sbjct: 61 YA---RAGIRDPKLVITTSRDPSSRLNQFVKELRLVFPNAQKLNRGNYVLKQLVETCRAN 117
Query: 178 DFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNF 237
+ T +++VH +R EPD L++ LP GPTA+F + VLR D+K + P L+ + F
Sbjct: 118 EVTDLVLVHEHRGEPDGLVVCHLPYGPTAYFGIMNAVLRHDLKERSTVSQQFPHLIFHKF 177
Query: 238 ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++LG R ++++ LFP P+ RV+TF N+ DFI FRHH
Sbjct: 178 DSKLGERTMKVLKHLFP-VPKEDAHRVITFANENDFISFRHH 218
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 387
L E GPRF LKL ++ GT D + EWV KP M ++R+
Sbjct: 230 LTEVGPRFELKLYQIKLGTVDMTEADNEWVLKPFMSNAKRK 270
>gi|221220154|gb|ACM08738.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Salmo salar]
Length = 291
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 95/151 (62%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+++TT R S+R F+ + + P + RG +++K +++ K + T +++VH
Sbjct: 83 PKVMVTTSRDPSSRLKMFVKGVKLIFPGAQRMNRGGHEIKALVQACKANNVTDLVIVHET 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R +PD L++ LP GPTA+F L +V+R D+ + G + P L+ +NF++RLG RV +
Sbjct: 143 RGQPDGLVVCHLPFGPTAYFTLYNVVMRHDVPDIGTMSEAYPHLIFHNFSSRLGQRVSNI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RRV+TF NQ DFI FRHH
Sbjct: 203 LKYLFP-VPKEDSRRVITFANQEDFISFRHH 232
>gi|384253434|gb|EIE26909.1| Brix-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 297
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 95/154 (61%), Gaps = 4/154 (2%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKILITT R S+R F EL V PN+ RG + +++E + DFT I+VVH +
Sbjct: 83 PKILITTSRDPSSRLTQFAKELKLVFPNAQRINRGGQIISELVETCRSHDFTDIVVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI---KNHGNPTGHIPELVLNNFATRLGHRV 245
R EP+ +++ LP GPTA F + VLR DI K G + P L++NNF++RLG RV
Sbjct: 143 RGEPNGMVVCHLPYGPTAFFGVYNTVLRHDIGEKKKVGTISEACPHLIINNFSSRLGERV 202
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
G +++ LFP P+ +RV++ NQ D+I FRHH
Sbjct: 203 GNILKYLFP-CPKDDSKRVISLVNQADYISFRHH 235
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWV 376
L ECGPRF LK+ ++ GT D + E EWV
Sbjct: 248 LTECGPRFELKIYQIRLGTLDQQHAENEWV 277
>gi|17544642|ref|NP_502404.1| Protein ZK795.3 [Caenorhabditis elegans]
gi|6226467|sp|O62518.1|YHPK_CAEEL RecName: Full=Brix domain-containing protein ZK795.3
gi|3881873|emb|CAB05841.1| Protein ZK795.3 [Caenorhabditis elegans]
Length = 292
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F E+ + PN+ RG YD+K++++ +K +D T +I+
Sbjct: 78 PKIVITTSRDPSSRLKMFAKEMKLIFPNAQRINRGHYDVKQVVQASKAQDSTDLIIFTET 137
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD +L+ LP GPTA F ++ +V+R DI N G + P L+ +N ++LGHR +
Sbjct: 138 RGNPDGMLVCHLPFGPTAFFSMANVVMRHDIPNCGTMSEQYPHLIFDNLNSKLGHRFTTI 197
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +R++TF N D+I FRHH
Sbjct: 198 LKHLFP-VPKPDSKRIITFSNSEDYISFRHH 227
>gi|237829973|ref|XP_002364284.1| U3 small nucleolar ribonucleoprotein protein, putative [Toxoplasma
gondii ME49]
gi|211961948|gb|EEA97143.1| U3 small nucleolar ribonucleoprotein protein, putative [Toxoplasma
gondii ME49]
gi|221507152|gb|EEE32756.1| U3 small nucleolar ribonucleoprotein, putative [Toxoplasma gondii
VEG]
Length = 314
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 155/328 (47%), Gaps = 53/328 (16%)
Query: 61 EKRKKLKARDAAEKRALELGEEPPA--------RMTPRTIENTREPDETVCRPDDDELFA 112
EK + L R K ALE G+ P+ ++ P +T DD+ +A
Sbjct: 20 EKARVLADRKKRLKEALERGKAVPSDLRGEAGQKLLPTLDLEDVNTAQTTTHIDDEYAYA 79
Query: 113 GNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 172
G + PK+++TT R S+R F+ EL +IPNS RG Y + ++E
Sbjct: 80 GVED------------PKVVLTTSRNPSSRLQQFVKELRLLIPNSQRINRGGYVVNDLVE 127
Query: 173 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPE 231
+ + T +I++H +R +PDA+++ LP GP A+F LS + LR D+ + N + P
Sbjct: 128 LCRSNNVTDLIIIHEHRGQPDAMVVCHLPHGPAAYFNLSGVALRHDLPEKPANMSEAAPH 187
Query: 232 LVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYM 291
LV +NF +R+G RV +++ L+P + +RV F N D I FRH Y
Sbjct: 188 LVFHNFTSRVGLRVMNVLKFLYPPANPI-AQRVQAFVNVGDEIHFRH-----------YT 235
Query: 292 WTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECG 351
WT + R K S S+ G + DA+ E++S++K L E G
Sbjct: 236 WT----------------DNR----KKTSGASNTPGSSSADAEEEESSEKKGHLELVEVG 275
Query: 352 PRFTLKLVSLQHGTFDTKGGEFEWVHKP 379
PRFTLK + GT + K E EW +P
Sbjct: 276 PRFTLKPYRIDLGTAEMKDVETEWAVRP 303
>gi|84999892|ref|XP_954667.1| u3 small nucleolar ribonucleoprotein protein [Theileria annulata]
gi|65305662|emb|CAI73987.1| u3 small nucleolar ribonucleoprotein protein, putative [Theileria
annulata]
Length = 291
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 129/259 (49%), Gaps = 56/259 (21%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+LITT R S+R F E +IPNS RG+Y LK ++E+ + KD + +++++
Sbjct: 83 PKVLITTSRNPSSRLTQFAKEFCLIIPNSERLNRGSYILKDLVEFCRSKDVSDMVLIYET 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH--IPELVLNNFATRLGHRVG 246
R +P +++I LP GPTA+F+LS +VLR D+ PT P L+ +NF + LG R+
Sbjct: 143 RGKPKSMIITHLPHGPTAYFQLSDVVLRHDL-TEKLPTMSQAYPHLMFHNFTSPLGERLK 201
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAF 306
+I+ +FP + R+++F N++D I FRHH +WT
Sbjct: 202 DIIRYMFPPA-NTNETRIMSFVNEKDKIVFRHH-----------VWT------------- 236
Query: 307 CYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 366
+K A+ +K S L+E GPRF LK ++ GT
Sbjct: 237 ---------------------EKKIGAEDKKIS-------LKEIGPRFVLKPFKIELGTV 268
Query: 367 DTKGGEFEWVHKPEMDTSR 385
D + E EWV +P +T +
Sbjct: 269 DMRDLETEWVLRPYFNTHK 287
>gi|209877867|ref|XP_002140375.1| U3 small nucleolar ribonucleoprotein IMP4 [Cryptosporidium muris
RN66]
gi|209555981|gb|EEA06026.1| U3 small nucleolar ribonucleoprotein IMP4, putative
[Cryptosporidium muris RN66]
Length = 287
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 114/252 (45%), Gaps = 57/252 (22%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKILITT R S+R F+ EL +IPNS RG Y LK + + + + +I+VH +
Sbjct: 82 PKILITTSRSPSSRLVQFVKELSLIIPNSSRINRGGYILKDLCHLCRTNEASDLIIVHEH 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI-PELVLNNFATRLGHRVGR 247
R EPD+++I P GPTA+F LSK+ LR D+ + P L+ NF ++LG R+
Sbjct: 142 RGEPDSMIISHFPHGPTAYFGLSKITLRHDLNVKPKNLSQVRPHLIFQNFGSKLGMRISN 201
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFC 307
+++ LFPQ+ F +RV F N D I FRH Y W
Sbjct: 202 ILKFLFPQAAPF-SKRVHVFLNNNDLIIFRH-----------YTW--------------- 234
Query: 308 YYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 367
+K D K L+E GPRF LK ++ GT +
Sbjct: 235 --------------------EKKDDVKD---------IELEEIGPRFILKPYRIELGTIE 265
Query: 368 TKGGEFEWVHKP 379
K EW KP
Sbjct: 266 MKSLTAEWTLKP 277
>gi|242023328|ref|XP_002432086.1| U3 small nucleolar ribonucleoprotein IMP4, putative [Pediculus
humanus corporis]
gi|212517460|gb|EEB19348.1| U3 small nucleolar ribonucleoprotein IMP4, putative [Pediculus
humanus corporis]
Length = 311
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F E+ + PNS RG Y++K+II + + T I++H N
Sbjct: 94 PKIVITTSRDPSSRLKMFAKEMKLIFPNSQRINRGNYEMKQIIHACRANEVTDFIILHEN 153
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R +PD L I LP GPTA+F +S +V+R DI + P L+ +NF T+LG RV +
Sbjct: 154 RGKPDGLTICHLPYGPTAYFSMSDVVMRHDIPEIETMSEQFPHLIFHNFTTKLGERVTNI 213
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +R++TF N D+I FRHH
Sbjct: 214 LKYLFP-VPKEDSKRIMTFANHDDYISFRHH 243
>gi|449684830|ref|XP_004210727.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Hydra magnipapillata]
Length = 227
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT S+R F EL ++PNS RG Y L +++ K D T +++ H +
Sbjct: 13 PKLMITTSHNPSSRLKQFAKELKLILPNSQRLNRGNYVLSQLVTACKANDVTDLVIAHEH 72
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD L+I LP GPTA+F LS ++R DI + G + P L+ +NF T+LG RV +
Sbjct: 73 RGNPDGLIICHLPFGPTAYFSLSNTIMRHDIPDVGKMSEAFPHLIFHNFQTKLGTRVQNI 132
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +RV+TF N+ DFI FRHH
Sbjct: 133 LRYLFP-VPKEDSKRVITFANKNDFISFRHH 162
>gi|444724794|gb|ELW65385.1| Spermatogenesis-associated protein 1 [Tupaia chinensis]
Length = 430
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 92/177 (51%), Gaps = 63/177 (35%)
Query: 212 KLVLRKDIKNHG----NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 267
K+++ + HG +PT H PE++LNNF TRLGH +GR+ SLFP P+F GR+V TF
Sbjct: 78 KILITTSDRPHGRRGKDPTEHKPEIILNNFTTRLGHSIGRMFASLFPHDPQFIGRQVATF 137
Query: 268 HNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANG 327
HNQRD+IFFR H RYIF++++ G
Sbjct: 138 HNQRDYIFFRFH--------------------------------RYIFKSEKKVG----- 160
Query: 328 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK---PEM 381
+QE GPRFTLKL SLQ GTFD+K GE+EWVHK PE+
Sbjct: 161 -------------------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKALQPEL 198
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 79 LGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTC-R 137
LG++ P + P+TI+N R PDET+ P+D+E+ DEF+S + +PKILITT R
Sbjct: 27 LGDKAPPKPVPKTIDNQRVPDETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDR 86
Query: 138 FNSNRG 143
+ RG
Sbjct: 87 PHGRRG 92
>gi|24649922|ref|NP_651335.2| CG11920 [Drosophila melanogaster]
gi|7301265|gb|AAF56395.1| CG11920 [Drosophila melanogaster]
gi|237513040|gb|ACQ99845.1| FI08810p [Drosophila melanogaster]
Length = 298
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 128/267 (47%), Gaps = 60/267 (22%)
Query: 126 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 184
GC PKI++TT S+R F+ EL +IPN+ RG Y L ++ + + T ++
Sbjct: 77 GCEDPKIMLTTSHNPSSRLKMFMKELRLIIPNAQQMNRGNYQLTTLMHACRANNVTDFLI 136
Query: 185 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 244
VH +R PD+L++ LP GPTA F +S +V+R DI + G+ + P L+ NNF T +G R
Sbjct: 137 VHEHRGIPDSLVVCHLPYGPTAFFNISDVVMRHDIPDIGHMSEQKPHLIFNNFKTPIGLR 196
Query: 245 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMK 304
++++ LFP P+ +RV++F N D I
Sbjct: 197 TVKILKHLFP-VPKENSQRVMSFLNHNDSII----------------------------- 226
Query: 305 AFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 364
F +++ +Y+ + E L E GPRF+LKL ++ G
Sbjct: 227 -FRHHQYKYVNKELE---------------------------LTEVGPRFSLKLYQIKLG 258
Query: 365 TFDT-KGGEFEWVHKPEMDTSRRRFFL 390
T + K + EW+++P M+TS++R
Sbjct: 259 TLENIKAADTEWINRPYMNTSQKRLIF 285
>gi|308459351|ref|XP_003091997.1| hypothetical protein CRE_02673 [Caenorhabditis remanei]
gi|308254489|gb|EFO98441.1| hypothetical protein CRE_02673 [Caenorhabditis remanei]
Length = 293
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F E+ + PN+ RG YD+K++++ K +D T +I+
Sbjct: 78 PKIVITTSRDPSSRLKMFAKEMKLIFPNAQRINRGHYDVKQVVQACKAQDSTDLIIFTET 137
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD +L+ LP GPTA F ++ +V+R DI N G + P L+ +N +RLG R +
Sbjct: 138 RGNPDGMLVCHLPFGPTAFFSMANVVMRHDIPNCGTMSEQYPHLIFDNLNSRLGQRFTTI 197
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +RV+TF N DF+ FRHH
Sbjct: 198 LKHLFP-VPKPESKRVITFSNTDDFVSFRHH 227
>gi|397643428|gb|EJK75859.1| hypothetical protein THAOC_02411 [Thalassiosira oceanica]
Length = 299
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 92/152 (60%), Gaps = 2/152 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P++ +TT R S+R F E+ ++PNS RGT + ++++ K DFT +IV
Sbjct: 92 PRVCVTTSRSPSSRLKQFAKEMKLIVPNSTRINRGTQRVDELVDVCKTSDFTDLIVFQET 151
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI-PELVLNNFATRLGHRVGR 247
R EPD +++ LP GPTA+F LS VLR D++ P P L+LNNF T+LG RVG
Sbjct: 152 RGEPDGMVVCHLPLGPTAYFTLSGGVLRHDLEGGAAPMSEAYPHLILNNFNTQLGRRVGN 211
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ LFP P+ RRV+TF N D I FRHH
Sbjct: 212 ILKCLFP-IPKPDTRRVITFANDDDHISFRHH 242
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L E GPRF ++L ++ GT D K + E+V +P M+T+ ++ L
Sbjct: 256 LYEVGPRFEMRLYQIKLGTLDMKDADNEYVLRPYMNTAGKKAML 299
>gi|171686510|ref|XP_001908196.1| hypothetical protein [Podospora anserina S mat+]
gi|170943216|emb|CAP68869.1| unnamed protein product [Podospora anserina S mat+]
Length = 491
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 134/276 (48%), Gaps = 57/276 (20%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKIL+TT + A E+ ++ PNS Y +R Y +++I ++AK ++
Sbjct: 259 PKILVTTSLNATIHKEA--EEIGAIFPNSTYIRRSGHRWGHKYSVREIAKFAK-----TL 311
Query: 183 IVVHTNRREPDALLIIGL-----PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNF 237
+VVH + + P + I+ L GPT + + + K + HGN T H PEL+LNNF
Sbjct: 312 VVVHEDLKRPHQMSIVHLNSEDAAPGPTLTYSIRNYLPGKSLLGHGNATNHYPELLLNNF 371
Query: 238 ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCS 297
T LG + + +LFP PE +GR+VVT HNQRD+IFFR H
Sbjct: 372 KTPLGLLAAKSMNTLFPARPELQGRQVVTLHNQRDYIFFRRH------------------ 413
Query: 298 YLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 357
RY+F +E++ ++ N A+ + E Q + LQE GPR TLK
Sbjct: 414 --------------RYVF--REARATEKNVVTAEGKEME--GMQGIRAGLQEIGPRMTLK 455
Query: 358 LVSLQHGT--FDTKG-GEFEWVHKPEMDTSRRRFFL 390
L + G ++G G +W K +M+ R RF L
Sbjct: 456 LRRVDKGIGRAGSEGEGALKWEWKAKMEKKRTRFNL 491
>gi|213624553|gb|AAI71258.1| LOC549383 protein [Xenopus (Silurana) tropicalis]
gi|213626175|gb|AAI71260.1| LOC549383 protein [Xenopus (Silurana) tropicalis]
Length = 291
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 120/233 (51%), Gaps = 15/233 (6%)
Query: 47 RSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPD 106
R A AKL +E +K+ R E R + A + +E E E V
Sbjct: 15 RKAQEAKLH---SIEDKKERLKRALEENRLIPTEIRREALALQKQLEFDDEGGEGVSSHM 71
Query: 107 DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD 166
DDE D PKI++TT R S+R F E+ + PN+ RG ++
Sbjct: 72 DDEYKWAGLED-----------PKIMVTTSRDPSSRLKIFAKEMRLIFPNAQRMNRGKHE 120
Query: 167 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT 226
+ +++ + D T +++VH +R PD L++ LP GPTA+F L +V+R DI + G +
Sbjct: 121 VGALVQACRANDVTDLLIVHEHRGMPDGLIVCHLPFGPTAYFTLCNVVMRHDIPDLGTMS 180
Query: 227 GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
P L+ +NF++RLG RV +++ LFP P+ +RV+TF NQ D+I FRHH
Sbjct: 181 EAHPHLIFHNFSSRLGQRVADIMKYLFP-VPKEESKRVITFANQDDYISFRHH 232
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF +KL ++ GT + +G E EW P +T+++R +L
Sbjct: 244 LTEVGPRFVMKLYMIKLGTLENEGTSEVEWRWHPYTNTAKKRKYL 288
>gi|302839990|ref|XP_002951551.1| hypothetical protein VOLCADRAFT_61433 [Volvox carteri f.
nagariensis]
gi|300263160|gb|EFJ47362.1| hypothetical protein VOLCADRAFT_61433 [Volvox carteri f.
nagariensis]
Length = 311
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 134/256 (52%), Gaps = 34/256 (13%)
Query: 31 KMKKEILPSMIKNKEKRSAVHAKLKHQKKVEKRK----KLKARDAAEKRALELGEEPPAR 86
+++KE L ++R+A K +K +E+ K +L+ +AA +R +EL ++
Sbjct: 7 RLRKEYLYRKSLEGKERAAYERKRLIRKALEEGKPIPTELRREEAALRREVELEDD---- 62
Query: 87 MTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 146
NT P V DDE + D PK+LITT R S+R F
Sbjct: 63 -------NTAVPRSHV----DDEYAHAGEVD-----------PKVLITTSRDPSSRLTQF 100
Query: 147 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 206
E+ VIPNS RG LK++++ + DFT I+V+H +R EPD +++ LP GPTA
Sbjct: 101 AKEVKLVIPNSQRINRGGLILKELVDTCRTHDFTDIVVLHEHRGEPDGMVVCHLPYGPTA 160
Query: 207 HFKLSKLVLRKDI---KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRR 263
+F + VLR DI K G + P L+ +N ++LG R +++ LFP P+ +R
Sbjct: 161 YFGIFNTVLRHDIGQKKEVGTISEAYPHLITDNLGSKLGQRTANILKHLFP-VPKDDSKR 219
Query: 264 VVTFHNQRDFIFFRHH 279
+V+F N+ DFI FRHH
Sbjct: 220 IVSFANRNDFISFRHH 235
>gi|225713452|gb|ACO12572.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Lepeophtheirus
salmonis]
Length = 310
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 94/151 (62%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+++TT R S+R F+ E+ ++PNS RG Y+ K++++ + + +++VH +
Sbjct: 95 PKVMLTTSRDPSSRLKKFVKEIKLLVPNSQRINRGNYEFKQLMDACRANEVADVVIVHEH 154
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD L++ LP GPTA+F LS +V+R DI GN + P LV +NF ++LG R +
Sbjct: 155 RGNPDGLIVCHLPFGPTAYFTLSDIVMRHDIPELGNMSEQYPHLVFHNFKSKLGERCTNI 214
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +R +TF N D+I FRHH
Sbjct: 215 LKYLFP-VPKEDSKRAMTFANHDDYISFRHH 244
>gi|321450338|gb|EFX62396.1| hypothetical protein DAPPUDRAFT_68025 [Daphnia pulex]
Length = 227
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 122/263 (46%), Gaps = 57/263 (21%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT S+ F+ EL V PNS +G Y++K++ + + T IVVH +
Sbjct: 13 PKIVITTSHDPSSCLKMFVKELKLVFPNSQRLNQGNYEMKQLFDACRANSVTDFIVVHEH 72
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
+P+A++I LP GPTA+F +S +V+R DI + G + P LV +N T LG RV +
Sbjct: 73 LGQPNAIIISHLPYGPTAYFNVSDVVMRHDIPDIGPMSEQYPHLVFHNMKTLLGQRVMNI 132
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCY 308
++ LFP S E +RV+TF N DFI +RHH
Sbjct: 133 LKYLFPVSKE-DSKRVITFANHNDFISYRHHTY--------------------------- 164
Query: 309 YECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD- 367
KG G + K E GPRF +L L+ T D
Sbjct: 165 -----------KKGEAGKGIELK-----------------EVGPRFQSRLYDLKLRTIDQ 196
Query: 368 TKGGEFEWVHKPEMDTSRRRFFL 390
+ EW ++P M+T+++R FL
Sbjct: 197 ADAADTEWAYRPYMNTTKKRRFL 219
>gi|294899178|ref|XP_002776523.1| U3 small nucleolar ribonucleoprotein imp4, putative [Perkinsus
marinus ATCC 50983]
gi|294953195|ref|XP_002787642.1| U3 small nucleolar ribonucleoprotein imp4, putative [Perkinsus
marinus ATCC 50983]
gi|239883555|gb|EER08339.1| U3 small nucleolar ribonucleoprotein imp4, putative [Perkinsus
marinus ATCC 50983]
gi|239902666|gb|EER19438.1| U3 small nucleolar ribonucleoprotein imp4, putative [Perkinsus
marinus ATCC 50983]
Length = 304
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 128/260 (49%), Gaps = 51/260 (19%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P++L+TT R S+R F+ E+ +IPNS RGTY +K +++ +K D + +++VH +
Sbjct: 82 PRVLVTTSRNPSSRLGKFVKEVRLLIPNSQRINRGTYVMKDLVDLCRKNDISDMVIVHEH 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLNNFATRLGHRVGR 247
R +PD L++ LP GPTA+F LS +VLR D+ + N P L+ +NF +G RV
Sbjct: 142 RGQPDGLIVSHLPYGPTAYFGLSDVVLRHDLPEKPPNMPETYPHLIFHNFGGNIGTRVQT 201
Query: 248 LIQSLFPQS-PEFRGRRVVTFHNQ-RDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKA 305
++ +LFP S P+ R +TF N D I FRHH
Sbjct: 202 VLSALFPPSKPD--STRTITFANDGGDCIGFRHH-------------------------- 233
Query: 306 FCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT 365
FE K +K + K D K+E +L E GPRF ++L L+ GT
Sbjct: 234 --------TFE-KPTKAT----KNRADVKAED-------VKLYEQGPRFNMQLYRLELGT 273
Query: 366 FDTKGGEFEWVHKPEMDTSR 385
D + EWV +P + R
Sbjct: 274 LDMPDVKTEWVLRPHFNNQR 293
>gi|298710512|emb|CBJ25576.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 286
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+ +TT R S+R F EL V+PN+ RG + + +++ + +FT +IVV
Sbjct: 82 PKVCVTTSRDPSSRLKQFAKELKLVVPNAQRINRGNHKVGELVGACRSSEFTDMIVVQET 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R EPD L++ LP GPTA F LS VLR DI + G + P L+ + F+T LG RV +
Sbjct: 142 RGEPDGLIVCHLPLGPTAFFTLSNCVLRHDIADRGTVSEVYPHLIFDKFSTPLGQRVADV 201
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RRV+TF N+ D ++FRHH
Sbjct: 202 LKYLFP-VPKADSRRVMTFSNEEDVLYFRHH 231
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L E GPRF ++L L+ GT D E EWV +P M++S++R FL
Sbjct: 243 LHEVGPRFEMQLYQLRLGTLDQVEAENEWVMRPYMNSSKKRRFL 286
>gi|426198218|gb|EKV48144.1| hypothetical protein AGABI2DRAFT_67378, partial [Agaricus bisporus
var. bisporus H97]
Length = 308
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 131/246 (53%), Gaps = 19/246 (7%)
Query: 44 KEKRSAVHAK-LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP--DE 100
+E+R V+AK L+ Q++ +K + +DA L G+ P + E ++ DE
Sbjct: 7 RERRQYVYAKSLEAQERQTWERKQQLKDA-----LATGKHLPTELRKDVKEMGKDLAFDE 61
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
P + DE+S Q PKI+ITT R S++ F E+ V PNSH
Sbjct: 62 AQAEP------TTHIDDEYSRAGIQD--PKIVITTSRDPSSKLLQFTKEMRLVFPNSHRI 113
Query: 161 KRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 220
RG Y +K + E + D T +IV+H +R PDA+++ P GPT +F LS + LR DI
Sbjct: 114 NRGNYVIKDLSEACRANDVTDLIVLHEHRGIPDAMIVSHFPHGPTVYFTLSNVQLRHDIN 173
Query: 221 NHGNPT--GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
N+ T P L+ NF+++LG R+ +++ LFP P+ +RV+TF N+ DFI FRH
Sbjct: 174 NYKGSTVSEQYPHLIFENFSSKLGGRIRDVLKFLFP-VPKEDSKRVMTFSNESDFISFRH 232
Query: 279 HRCVPL 284
H V +
Sbjct: 233 HVFVTI 238
>gi|328770964|gb|EGF81005.1| hypothetical protein BATDEDRAFT_88074 [Batrachochytrium
dendrobatidis JAM81]
Length = 285
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+L+TT R S+R F EL + PNS RG Y ++ I++ +K D T +I++H +
Sbjct: 82 PKVLLTTSRDPSSRLTMFSKELKLMFPNSQRMNRGNYIIEDIVDACRKSDATDLIILHEH 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R +PD ++I P GPTA+F L +VLR DI + G + P L+ NF ++LG RV +
Sbjct: 142 RGQPDGMVISHFPYGPTAYFTLHNVVLRHDIPDRGTVSEQFPHLIFENFNSKLGQRVQNI 201
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +RV+TF N D+I +RHH
Sbjct: 202 LKYLFP-VPKEDSKRVMTFANSSDYISYRHH 231
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 346 RLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+L E GPRF ++L ++ GT D K + EWV +P T+++R L
Sbjct: 241 QLAEVGPRFEMRLYEIKQGTVDIKEADTEWVFRPYQRTAKKRDVL 285
>gi|170035194|ref|XP_001845456.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Culex
quinquefasciatus]
gi|167877008|gb|EDS40391.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Culex
quinquefasciatus]
Length = 311
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 121/238 (50%), Gaps = 27/238 (11%)
Query: 42 KNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDET 101
K E + +H LK + ++ + KLK DA +RA E+G T
Sbjct: 34 KALEDHTPIHGDLK-RDALKLQDKLKWDDAGPQRAAEIG-------------GISGGANT 79
Query: 102 VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYK 161
DD+ FAG + PKI+ITT R S + F+ E+ + PN+
Sbjct: 80 ANSQDDEYRFAGCED------------PKIMITTSRDPSAKLKQFVKEIRLIFPNAQRMN 127
Query: 162 RGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN 221
RG +++K++I + + T IV+H +R PD L+I LP GPTA F LS +V+R DI +
Sbjct: 128 RGNFEMKQLIHACRANNVTDFIVIHEHRGVPDNLIICHLPYGPTACFNLSGVVMRHDIPD 187
Query: 222 HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
G + P L+ +NF T+L R +++ LFP P+ +RV+TF N D+I FRHH
Sbjct: 188 IGPMSEQKPHLIFHNFKTKLAERTMSILKYLFP-VPKEESKRVMTFANHDDYISFRHH 244
>gi|19114697|ref|NP_593785.1| U3 snoRNP-associated protein Imp4 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|6226440|sp|O13823.1|IMP4_SCHPO RecName: Full=U3 small nucleolar ribonucleoprotein protein imp4;
Short=U3 snoRNP protein imp4
gi|2388906|emb|CAB11643.1| U3 snoRNP-associated protein Imp4 (predicted) [Schizosaccharomyces
pombe]
Length = 289
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 88/151 (58%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+L+TT R S+R F E+ +IPNS+ RG + ++E A+ D T I+++H +
Sbjct: 84 PKVLVTTSREPSSRLAQFAKEVRLLIPNSYRLNRGNIVVGSLVEAARANDITDIVILHEH 143
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD L+I LP GPT F L +VLR DI N G + P L+ N ++LG RV
Sbjct: 144 RGIPDGLVISHLPYGPTLSFSLHNVVLRHDIPNTGTMSEAYPHLIFENLTSKLGKRVKTA 203
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+ +LFP P+ RVVTF N D+I FRHH
Sbjct: 204 LSALFPPDPKDTTPRVVTFANTDDYISFRHH 234
>gi|432875435|ref|XP_004072840.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Oryzias latipes]
Length = 291
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI++TT R S+R F E+ + P + RG ++L ++ K + T +++VH
Sbjct: 83 PKIMVTTSRDPSSRLKMFAKEVKLMFPGAQRMNRGNHELPTLVRACKANNVTDLVIVHET 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R +PD L++ LP GPTA+F L +V+R D+ + G + P L+ +NF +RLG RV +
Sbjct: 143 RGQPDGLVVCHLPFGPTAYFTLYNVVMRHDVPDIGTMSEAYPHLIFHNFTSRLGRRVSSI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RRV+TF NQ DFI FRHH
Sbjct: 203 LKYLFP-VPKDDSRRVITFANQDDFISFRHH 232
>gi|225711812|gb|ACO11752.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Caligus
rogercresseyi]
Length = 310
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 129/263 (49%), Gaps = 58/263 (22%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+++TT R S+R F+ E+ +IPNS RG ++ K+++E + + T I++VH +
Sbjct: 95 PKVMLTTSREPSSRLKKFVKEIKLLIPNSQRINRGNHEFKQLVEACRANEVTDIVIVHEH 154
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD L++ LP GPTA F LS +V+R DI G + P LV +NF + +G R +
Sbjct: 155 RGNPDGLIVCHLPFGPTAFFTLSDIVMRHDIPELGCMSEQYPHLVFHNFKSTIGERCMNI 214
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCY 308
++ LFP P+ +RV+TF N DFI FRHH +Y
Sbjct: 215 LKYLFP-VPKEDSKRVMTFANHDDFISFRHH-----------------TY---------- 246
Query: 309 YECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT 368
K D K+ + S+ V RLQ L+L ++ GT ++
Sbjct: 247 --------------------KKGDGKNIELSE--VGPRLQ-------LRLYEIKLGTLES 277
Query: 369 -KGGEFEWVHKPEMDTSRRRFFL 390
EWV +P M+T+++R FL
Sbjct: 278 IAAANSEWVLRPYMNTAKKRRFL 300
>gi|259089074|ref|NP_001158575.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Oncorhynchus
mykiss]
gi|225704992|gb|ACO08342.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Oncorhynchus
mykiss]
Length = 291
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 94/151 (62%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+++TT R S+R F+ E+ + P + RG +++ +++ K + T +++VH
Sbjct: 83 PKVVVTTSRDPSSRLKMFVKEVKLIFPGAQCMNRGGHEINALVQACKANNVTDLVIVHET 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R +PD L++ LP GPTA+F L +V+R D+ + + P L+ +NF++RLG RV +
Sbjct: 143 RGQPDGLVVCHLPFGPTAYFTLYNVVMRHDVPDIETMSEAYPHLIFHNFSSRLGQRVSNI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RRV+TF NQ DFI FRHH
Sbjct: 203 LKYLFP-VPKEDSRRVITFANQEDFISFRHH 232
>gi|224014550|ref|XP_002296937.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968317|gb|EED86665.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 299
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 92/152 (60%), Gaps = 2/152 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P++ +TT R S+R F E+ +IPNS RG++ + ++++ K DF+ ++VV
Sbjct: 92 PRVCVTTSRAPSSRLKQFAKEMKLLIPNSTRINRGSHRVDELVDVCKTSDFSDLVVVQET 151
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI-PELVLNNFATRLGHRVGR 247
R EPD L++ LP GPTA+F L+ VLR D++ P P ++LN F + LG RVG
Sbjct: 152 RGEPDGLIVCHLPLGPTAYFTLNGAVLRHDLEGGAAPMSEAYPHIILNQFNSELGKRVGN 211
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ LFP P+ RRVVTF N D I FRHH
Sbjct: 212 ILKCLFP-IPKLDTRRVVTFSNNDDHISFRHH 242
>gi|66357362|ref|XP_625859.1| IMP4 U3 small nucleolar ribonucleoprotein [Cryptosporidium parvum
Iowa II]
gi|46226865|gb|EAK87831.1| IMP4 U3 small nucleolar ribonucleoprotein [Cryptosporidium parvum
Iowa II]
gi|323508683|dbj|BAJ77235.1| cgd4_2740 [Cryptosporidium parvum]
gi|323509709|dbj|BAJ77747.1| cgd4_2740 [Cryptosporidium parvum]
Length = 288
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 120/264 (45%), Gaps = 57/264 (21%)
Query: 117 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
DE+S L PKILITT R S+R F+ EL VIPNS RG Y L + +
Sbjct: 72 DEYS--LSGLYEPKILITTSRSPSSRLLQFVKELNLVIPNSFRINRGGYVLNDFGDLCRS 129
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLN 235
T ++VVH +R EPD L+I P GPTA+F +S +VLR D+ + IP L+
Sbjct: 130 NGATDLVVVHEHRGEPDGLIISHFPYGPTAYFAISDVVLRHDLPIKPSTMSQSIPHLIFQ 189
Query: 236 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTIL 295
NF + LG RV +++ LFP+ +RV++F N D I FRH + W
Sbjct: 190 NFNSTLGLRVSNILKHLFPKLKN-ASQRVISFVNINDNIIFRH-----------FSW--- 234
Query: 296 CSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 355
K KSE+ +L E GPRF
Sbjct: 235 --------------------------------DKDITDKSEE-------IQLNEIGPRFI 255
Query: 356 LKLVSLQHGTFDTKGGEFEWVHKP 379
LKL ++ GT + K EWVH+P
Sbjct: 256 LKLYKIELGTLEMKNLSIEWVHRP 279
>gi|70934420|ref|XP_738439.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514660|emb|CAH85529.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 263
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 132/242 (54%), Gaps = 7/242 (2%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
+KNK KR+A+ K + KK+ RK+ K D K++L + P + PR+I+ DE
Sbjct: 27 VKNKNKRNALKGK-AYLKKLILRKQ-KKEDIKNKKSLNI---PIEKKIPRSIDQLALFDE 81
Query: 101 T-VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
+ + +++ L + DEFS K P I+IT+ + S F+ EL P+ Y
Sbjct: 82 SKINNENENFLLSEKYIDEFSEYFKNNKEPNIIITSIKRPSKNTILFMKELTLTFPHIFY 141
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTN-RREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
R +DL + + A + DF++ I++ + P + I LP+GPT+ + L+ ++
Sbjct: 142 EPRLDHDLDFLFKNAIQNDFSTFILIEEGIDKHPKYMFISTLPNGPTSKYSLTNIMYAHK 201
Query: 219 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
+ T PE+ + NF T +G R+ R + +L P +P ++G++VV F+NQRDFIFFRH
Sbjct: 202 KNSDIEITTLPPEVYITNFNTFIGERIKRQLHTLVPFTPNYKGQKVVVFYNQRDFIFFRH 261
Query: 279 HR 280
++
Sbjct: 262 YK 263
>gi|164656901|ref|XP_001729577.1| hypothetical protein MGL_3121 [Malassezia globosa CBS 7966]
gi|159103470|gb|EDP42363.1| hypothetical protein MGL_3121 [Malassezia globosa CBS 7966]
Length = 294
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 90/156 (57%), Gaps = 3/156 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P+ILITT R S+R F EL V PNS RGTY + ++ A+ T +IVVH +
Sbjct: 83 PRILITTARSPSSRLSQFAKELRLVFPNSTRMNRGTYTMPELAAAARSNGITDMIVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 246
R PDA+++ P GPT F L + LR ++ +HGN T P L+ + F RLG RV
Sbjct: 143 RGVPDAMVVSHFPHGPTVMFTLHNVTLRHEVASHGNSTVSEQFPHLIFDGFGGRLGERVK 202
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
++ LFP P+ RRV+TF N+ DFI FRHH V
Sbjct: 203 SALRFLFP-VPKDDARRVMTFANRNDFISFRHHVFV 237
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 387
L E GPRF L+ ++ GT + + EWV +P M+T+R+R
Sbjct: 245 LAEVGPRFDLRPYEIRLGTLEQSEADVEWVLRPYMNTTRKR 285
>gi|116207948|ref|XP_001229783.1| hypothetical protein CHGG_03267 [Chaetomium globosum CBS 148.51]
gi|88183864|gb|EAQ91332.1| hypothetical protein CHGG_03267 [Chaetomium globosum CBS 148.51]
Length = 440
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 121/250 (48%), Gaps = 46/250 (18%)
Query: 150 LLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGL-----PDGP 204
L + IP S + Y +++I ++AK + +T+++VVH + + P L + L P GP
Sbjct: 228 LATYIPRSAHRYGHKYSVREIAKFAKNRGYTALLVVHEDLKRPSQLSVCHLNGEDAPPGP 287
Query: 205 TAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 264
T + + K I HGNPT H PEL+LN F T LG + + +LFP PE GR+V
Sbjct: 288 TLTYTIRNYQPGKAILGHGNPTNHYPELLLNGFKTPLGLLAAKSMNTLFPPKPELAGRQV 347
Query: 265 VTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSD 324
+T HNQRD+IFFR H RYIF +E++ ++
Sbjct: 348 LTLHNQRDYIFFRRH--------------------------------RYIF--REARATE 373
Query: 325 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE----FEWVHKPE 380
N + A D K E + + LQE GPR TLKL + G G E +W K +
Sbjct: 374 KNVQGA-DGK-EMDGVKGIRAGLQEIGPRMTLKLRRVDKG-IGRAGSEGDDALKWEWKAK 430
Query: 381 MDTSRRRFFL 390
M+ R RF L
Sbjct: 431 MEKKRTRFNL 440
>gi|196004102|ref|XP_002111918.1| hypothetical protein TRIADDRAFT_55417 [Trichoplax adhaerens]
gi|190585817|gb|EDV25885.1| hypothetical protein TRIADDRAFT_55417 [Trichoplax adhaerens]
Length = 304
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 134/241 (55%), Gaps = 20/241 (8%)
Query: 44 KEKRSAVHAKLKHQKKV---EKRKKLKAR-DAAEKRALELGEEPPARMTPRTIENTREPD 99
+E++ ++ K K +++ EK+KKLKA D+ + EL +E A + + R D
Sbjct: 7 RERKEYIYRKAKEEQERTIHEKKKKLKAAIDSGKPIPTELRKEE-AELRKELEFDDRNTD 65
Query: 100 ETVCRPDDDELFAG-NDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
+ + DD+ +AG ND P I+ITT S++ F E+ + PN
Sbjct: 66 KYIEDRDDEYKWAGVND-------------PSIMITTSHEPSSKLKQFAKEMKLIFPNCQ 112
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
RG + L ++I+ + + T +I+VH +R +PD +++ LP GPTA+F LS +V+R D
Sbjct: 113 RMNRGNHVLSELIQACRANNVTDLIIVHEHRGQPDGMIVSHLPYGPTAYFTLSNVVMRHD 172
Query: 219 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
I+N G + P L+ + F+++LG RV +++ LFP P+ RR++TF N DFI FRH
Sbjct: 173 IENIGPMSEAYPHLIFHKFSSKLGLRVKNILRYLFP-VPKESTRRIITFANDDDFISFRH 231
Query: 279 H 279
H
Sbjct: 232 H 232
>gi|348543177|ref|XP_003459060.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Oreochromis niloticus]
Length = 308
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 115/220 (52%), Gaps = 15/220 (6%)
Query: 61 EKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDEL-FAGNDADEF 119
EK++KLK E R L A + +E E E V DDE +AG +
Sbjct: 44 EKKQKLKGA-LDENRLLPTEIRKEALELQKLVEYDDEGAEGVSSHVDDEYKWAGVED--- 99
Query: 120 SSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDF 179
PK+++TT R S+R F E+ + P + RG +++ ++ K
Sbjct: 100 ---------PKVMVTTSRDPSSRLKMFAKEVKLMFPGAQRMNRGNHEIPALVRACKANSV 150
Query: 180 TSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFAT 239
T +++VH R +PD L++ LP GPTA+F L +V+R D+ + G + P L+ +NF +
Sbjct: 151 TDLVIVHETRGQPDGLVVCHLPFGPTAYFTLYNVVMRHDVPDIGTMSEAYPHLIFHNFTS 210
Query: 240 RLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
RLG RV +++ LFP P+ RRV+TF NQ DFI FRHH
Sbjct: 211 RLGKRVSNILKYLFP-VPKEDSRRVITFANQEDFISFRHH 249
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF +KL ++ GT + +G + EW H T+++R FL
Sbjct: 261 LTEVGPRFEMKLYMIKLGTLENEGTADVEWRHHAYTHTAKKRRFL 305
>gi|255544049|ref|XP_002513087.1| U3 small nucleolar ribonucleoprotein protein imp4, putative
[Ricinus communis]
gi|223548098|gb|EEF49590.1| U3 small nucleolar ribonucleoprotein protein imp4, putative
[Ricinus communis]
Length = 293
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 99/166 (59%), Gaps = 6/166 (3%)
Query: 117 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
DE+++ ++ PKIL+TT R S F+ EL V PN+ RG + +IIE +
Sbjct: 73 DEYANATEKD--PKILLTTSRNPSAPLIQFVKELKFVFPNAERINRGGQVISEIIESCRA 130
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELV 233
D+T +I+VH +R PD L+I LP GPTA+F L +V R DIK+ G P L+
Sbjct: 131 HDYTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHDIKDKKAIGTMPEAYPHLI 190
Query: 234 LNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
LNNF T+LG R +++ LFP P+ +R++TF NQ D+I FRHH
Sbjct: 191 LNNFKTKLGERTANVLKHLFPM-PKIDAKRIITFANQSDYISFRHH 235
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L+E GPRF ++L ++ GT D EWV +P M+TS++R F+
Sbjct: 248 LKEIGPRFEMRLYQIKLGTMDQNEAHNEWVIRPYMNTSKKRKFI 291
>gi|348683814|gb|EGZ23629.1| hypothetical protein PHYSODRAFT_481255 [Phytophthora sojae]
Length = 287
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI ITT R S R F E+ + PN+ RG + + ++E A+ DFT +I+V
Sbjct: 84 PKIAITTSRDPSARLKQFAQEIRLIFPNAIRLNRGAHTVGDLVESARSNDFTDLILVTET 143
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R EPD L++ LP GPTA+F LS VLR DI++ + P L++N F T LG RV +
Sbjct: 144 RGEPDGLVVCHLPYGPTAYFSLSNTVLRHDIEDRATISEAYPHLIINQFETMLGKRVANI 203
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +RV+T N DF+ FRHH
Sbjct: 204 LKHLFP-VPKPDSKRVITLSNDNDFVSFRHH 233
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQECGPRF L+L ++ GT D K E EWV +P M+++++R L
Sbjct: 244 LQECGPRFELQLYQVKLGTLDQKEAENEWVLRPYMNSAKKRRVL 287
>gi|242247367|ref|NP_001156260.1| U3 small nucleolar ribonucleoprotein protein imp4-like
[Acyrthosiphon pisum]
gi|239789438|dbj|BAH71344.1| ACYPI008198 [Acyrthosiphon pisum]
Length = 313
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT S R F+ EL + PN+ RG Y++K++I+ + + T IVVH +
Sbjct: 94 PKIMITTSHDPSTRLKKFVKELRLIFPNAQRMNRGNYEIKQLIQACRANEVTDFIVVHEH 153
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD L++ +P GPTA+F L+ +V+R D+ + G + P L+ +NF T+LG R +
Sbjct: 154 RGVPDTLIVCHMPYGPTAYFNLTDVVMRHDVPDIGTMSEQFPHLIFHNFETQLGKRTMNI 213
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ L+P P+ +RV++F N D+I FRHH
Sbjct: 214 LKYLYP-VPKEDSKRVISFANHDDYISFRHH 243
>gi|320580075|gb|EFW94298.1| Component of the SSU processome [Ogataea parapolymorpha DL-1]
Length = 285
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 121/243 (49%), Gaps = 21/243 (8%)
Query: 44 KEKRSAVHAK---LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTP-RTIENTREPD 99
+E+R ++ K L+ Q +EKRK+L AL G+ P + ++ D
Sbjct: 7 RERREYLYRKAQQLQEQTLIEKRKQLS-------HALATGKNLPKEIADDEKLQKDYLYD 59
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
E++ DDE S L PKI+ITT R S+R F E+ + PN+
Sbjct: 60 ESIQETVDDEY----------SALSGLVEPKIIITTSRSPSSRLSQFTKEMKLLFPNAMR 109
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
RG Y L +IE KK T +IV+H +R P L I LP GP+ F L +VLR DI
Sbjct: 110 LNRGNYILSDLIETCKKSGVTDVIVIHEHRGVPTTLTITHLPHGPSVTFTLHNVVLRHDI 169
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
N G+ + P LV NF ++LG RV ++++ LFP + + RV++F N DFI R H
Sbjct: 170 LNVGSQSEAYPHLVFENFTSKLGKRVVQVLKHLFPPGVKPQSPRVISFVNNEDFISVRQH 229
Query: 280 RCV 282
V
Sbjct: 230 LYV 232
>gi|301114965|ref|XP_002999252.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Phytophthora
infestans T30-4]
gi|262111346|gb|EEY69398.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Phytophthora
infestans T30-4]
Length = 287
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 90/151 (59%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI ITT R S+R F E+ + PN+ RG + + ++E A+ DFT +++V
Sbjct: 84 PKIAITTSRDPSSRLKQFAQEIRLIFPNAIRLNRGAHTVGDLVESARSNDFTDLLLVTET 143
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R EPD L++ LP GPTA+F LS VLR DI++ + P L++N F T LG RV +
Sbjct: 144 RGEPDGLVVCHLPYGPTAYFSLSNTVLRHDIEDRATISEAYPHLIINQFETPLGKRVANI 203
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +RV+T N DF+ FRHH
Sbjct: 204 LKHLFP-VPKPDAKRVITLSNDNDFVSFRHH 233
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQECGPRF L+L ++ GT D K E EWV +P M+++++R L
Sbjct: 244 LQECGPRFELQLYQVKLGTLDQKEAENEWVLRPYMNSAKKRRVL 287
>gi|50540508|ref|NP_001002719.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Danio rerio]
gi|49899179|gb|AAH75765.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Danio
rerio]
Length = 291
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 114/219 (52%), Gaps = 13/219 (5%)
Query: 61 EKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFS 120
EK++KLK+ E R L A + +E E E V DDE D
Sbjct: 27 EKKQKLKSA-LDENRLLPTEVRKEALEVQKLLEFDDEGGEGVSSHMDDEYKWAGVED--- 82
Query: 121 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 180
PKI++TT R S+R F E+ + P + RG +++K ++ K + T
Sbjct: 83 --------PKIMVTTSRDPSSRLKMFAKEMKLMFPGAQRMNRGNHEVKTLVHACKSNNVT 134
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 240
+++VH R +PD L++ LP GPTA+F + +V+R D+ + G + P L+ +NF +R
Sbjct: 135 DLVIVHETRGQPDGLVVCHLPFGPTAYFTMYNVVMRHDVPDIGTMSEAYPHLIFHNFTSR 194
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
LG RV +++ LFP P+ RRV+TF N D+I FRHH
Sbjct: 195 LGRRVSNILKYLFP-VPKEDSRRVITFANTDDYISFRHH 232
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF +KL ++ GT + + + EW H P T+++R FL
Sbjct: 244 LTEVGPRFEMKLYMIKLGTLENESTADVEWRHHPYTRTAKKRKFL 288
>gi|67614595|ref|XP_667381.1| U3 snoRNP protein IMP4 [Cryptosporidium hominis TU502]
gi|54658515|gb|EAL37153.1| U3 snoRNP protein IMP4 [Cryptosporidium hominis]
Length = 288
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 119/264 (45%), Gaps = 57/264 (21%)
Query: 117 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
DE+S L PKILITT R S+R F+ EL VIPNS RG Y L + +
Sbjct: 72 DEYS--LSGLYEPKILITTSRSPSSRLLQFVKELNLVIPNSFRINRGGYVLNDFGDLCRS 129
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH-IPELVLN 235
T ++VVH +R EPD L+I P GPTA+F +S +VLR D+ + IP L+
Sbjct: 130 NGATDLVVVHEHRGEPDGLIISHFPHGPTAYFAISDVVLRHDLSIKPSAMSQSIPHLIFQ 189
Query: 236 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTIL 295
NF + LG RV +++ LFP+ +RV++F N D I FRH + W
Sbjct: 190 NFNSTLGLRVSDILKHLFPKLKN-TSQRVISFVNVNDNIIFRH-----------FSW--- 234
Query: 296 CSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 355
K KSE+ +L E GPRF
Sbjct: 235 --------------------------------DKDMTDKSEE-------IQLNEIGPRFI 255
Query: 356 LKLVSLQHGTFDTKGGEFEWVHKP 379
L+L ++ GT + K EW H+P
Sbjct: 256 LRLYKIELGTLEMKNLSIEWAHRP 279
>gi|358059282|dbj|GAA94970.1| hypothetical protein E5Q_01625 [Mixia osmundae IAM 14324]
Length = 481
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 166/364 (45%), Gaps = 83/364 (22%)
Query: 43 NKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPAR---------------- 86
++ +R++ +A K QK EK K+ A+ AEK L EE AR
Sbjct: 11 SRHRRTSTYAIEKKQKSQEKLKRRLAQKKAEKEDPSLREERVARNLKAAHEGAQELNLDD 70
Query: 87 --------------MTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKIL 132
+ P I++ ++ + V P + + A+ + G +IL
Sbjct: 71 GMNGMVIDLAGLEDLFPEPIKHPKQ--QPVAGPSSERNIDLDGAEMDDEDEQAGMTGRIL 128
Query: 133 ITTCRFNSNRGPAFISEL---------LSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSII 183
+TT + F+ EL +IP K ++L K+ ++A K+ ++++I
Sbjct: 129 LTTAPRPTPATYDFLKELQGLFGGPMLAEIIPR----KSPRHELSKVCKWAAKRGYSALI 184
Query: 184 VVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGH 243
VV + + P +L + LP GPTAHF+L+ ++ K I++H PT H PELVL+NF+T +G
Sbjct: 185 VVGEDHKHPSSLTMTRLPLGPTAHFRLTSILGCKQIRDHARPTAHAPELVLSNFSTPIGL 244
Query: 244 RVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIM 303
VGRL Q LFP P+ +GR+VV HNQRDF+F Y + +
Sbjct: 245 SVGRLFQGLFPPMPDIQGRQVVAIHNQRDFVF---------FRRFRYAFAVRS------- 288
Query: 304 KAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQH 363
E + E E +G D + + T+LQE GPRFTLKL ++
Sbjct: 289 ------EGKISTELAEKRGMDKD----------------IRTKLQEIGPRFTLKLRWIKR 326
Query: 364 GTFD 367
GT +
Sbjct: 327 GTLE 330
>gi|195039076|ref|XP_001990856.1| GH18024 [Drosophila grimshawi]
gi|193895052|gb|EDV93918.1| GH18024 [Drosophila grimshawi]
Length = 298
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 123/261 (47%), Gaps = 60/261 (22%)
Query: 126 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 184
GC PKI++TT S+R F+ EL + PN+ RG Y + +++ + +FT I+
Sbjct: 78 GCQDPKIMLTTSHEPSSRLKMFVKELRLIFPNAQQMNRGKYQINALMQACRANNFTDFII 137
Query: 185 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 244
VH +R PD+L++ LP GPTA F +S + +R DI + G + P L+ +NF + + R
Sbjct: 138 VHEHRGIPDSLVVCHLPFGPTAFFNISDVTMRHDIPDIGPMSEQKPHLIFSNFKSNIALR 197
Query: 245 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMK 304
++++ LFP P+ R+++F N D I FRHH
Sbjct: 198 TVKILKHLFP-VPKESSERIMSFINNEDKIVFRHH------------------------- 231
Query: 305 AFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 364
+Y + KE K L E GPRFTLKL ++ G
Sbjct: 232 -------QYKYVNKEIK-------------------------LTEAGPRFTLKLYQIKLG 259
Query: 365 TF-DTKGGEFEWVHKPEMDTS 384
T + K + EWV++P ++T+
Sbjct: 260 TLENIKAVDTEWVNRPYLNTT 280
>gi|157112156|ref|XP_001657418.1| U3 small nucleolar ribonucleoprotein protein imp4 [Aedes aegypti]
gi|108878165|gb|EAT42390.1| AAEL006063-PA [Aedes aegypti]
Length = 313
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 119/238 (50%), Gaps = 27/238 (11%)
Query: 42 KNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDET 101
K+ E + +H LK + + + KLK D KRA E+G T
Sbjct: 34 KSLEDHTPIHGDLK-KDALMLQDKLKWNDEGPKRAAEIG-------------GISGGANT 79
Query: 102 VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYK 161
DD+ +AG + PKI+ITT R S + F+ EL + PN+
Sbjct: 80 ADSQDDEYRYAGCED------------PKIMITTSRDPSAKLKQFVKELRLLFPNAQRMN 127
Query: 162 RGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN 221
RG +++K++I + + T IVVH +R PD L+I LP GPTA F LS +V+R DI
Sbjct: 128 RGNFEMKQLIHACRANNVTDFIVVHEHRGVPDNLIICHLPYGPTASFNLSGVVMRHDIPE 187
Query: 222 HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
G + P L+ +NF T+L R +++ LFP P+ +RV+TF N D+I FRHH
Sbjct: 188 IGPMSEQKPHLIFHNFKTKLAERTMSVLKYLFP-VPKEDSKRVMTFANHDDYISFRHH 244
>gi|94469098|gb|ABF18398.1| U3 small nucleolar ribonucleoprotein component [Aedes aegypti]
Length = 313
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 119/238 (50%), Gaps = 27/238 (11%)
Query: 42 KNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDET 101
K+ E + +H LK + + + KLK D KRA E+G T
Sbjct: 34 KSLEDHTPIHGDLK-KDALMLQDKLKWNDEGPKRAAEIG-------------GISGGANT 79
Query: 102 VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYK 161
DD+ +AG + PKI+ITT R S + F+ EL + PN+
Sbjct: 80 ADSQDDEYRYAGCED------------PKIMITTSRDPSAKLKQFVKELRLLFPNAQRMN 127
Query: 162 RGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN 221
RG +++K++I + + T IVVH +R PD L+I LP GPTA F LS +V+R DI
Sbjct: 128 RGNFEMKQLIHACRANNVTDFIVVHEHRGVPDNLIICHLPYGPTASFNLSGVVMRHDIPE 187
Query: 222 HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
G + P L+ +NF T+L R +++ LFP P+ +RV+TF N D+I FRHH
Sbjct: 188 IGPMSEQKPHLIFHNFKTKLAERTMSVLKYLFP-VPKEDSKRVMTFANHDDYISFRHH 244
>gi|399218220|emb|CCF75107.1| unnamed protein product [Babesia microti strain RI]
Length = 296
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 110/190 (57%), Gaps = 19/190 (10%)
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
E V DD+ +AGN +L PK+LITT R S+R F+ EL +IPNS
Sbjct: 65 EAVSHIDDEYTYAGN-------LLFYLGEPKVLITTSRDPSSRLLQFVKELRLMIPNSER 117
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNR--------REPDALLIIGLPDGPTAHFKLS 211
RG+Y LK +I +AK K + +++VH +R +PDA+++ LP GPTA+F+LS
Sbjct: 118 LNRGSYILKDLIFFAKAKQISDVVLVHEHRGNKYDIYLGQPDAMIVSHLPSGPTAYFQLS 177
Query: 212 KLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHN 269
+ LR D+ PT P L+ +NF T+LG RV +++ LFP + + RV++F N
Sbjct: 178 DVKLRHDLPEKP-PTLSEAYPHLIFHNFTTKLGLRVRDILRYLFPPA-NMQETRVLSFIN 235
Query: 270 QRDFIFFRHH 279
+RD I FRHH
Sbjct: 236 ERDIIHFRHH 245
>gi|353234298|emb|CCA66324.1| probable IMP4-component of the U3 small nucleolar ribonucleoprotein
[Piriformospora indica DSM 11827]
Length = 288
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 152/346 (43%), Gaps = 76/346 (21%)
Query: 53 KLKHQKKVEKRKK-LKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELF 111
+L +Q+ +E++++ + R A K AL G+ P + +E ++ D F
Sbjct: 11 QLVYQRSMEQQERAIYQRKQAVKDALASGKNLPTELRKPAVEMSK-----------DIAF 59
Query: 112 AGNDADEFSSI----LKQGC-APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD 166
D SS+ + G PKI+ITT R S++ F E+ V PNSH RG Y
Sbjct: 60 DAAQEDPMSSVDYEYSRAGIRDPKIVITTSRDPSSKLLQFAKEMRLVFPNSHRINRGNYV 119
Query: 167 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT 226
+K++ E + + T +I++H R PDAL++ P GPT F L + LR D+ N N T
Sbjct: 120 VKELAEACRANEVTDLIILHETRGVPDALIVSHFPHGPTVFFTLHSVSLRHDLPNSSNST 179
Query: 227 --GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPL 284
P L+ F T+LG R+ +++ LFP P+ RV++F N+ DFI FRHH
Sbjct: 180 VSEQYPHLIFEAFETKLGTRIRDVLKYLFP-VPKEDATRVMSFINESDFISFRHH----- 233
Query: 285 EFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVI 344
+F AK K E
Sbjct: 234 -----------------------------VF--------------AKTGKKE-------- 242
Query: 345 TRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+L E GPRF +K ++ GT + + + EWV T+R+R L
Sbjct: 243 VQLAEVGPRFEMKPYEIRLGTIEQEEADKEWVLAHYTRTARKRRML 288
>gi|391338699|ref|XP_003743693.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Metaseiulus occidentalis]
Length = 296
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 116/225 (51%), Gaps = 19/225 (8%)
Query: 61 EKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRP------DDDELFAGN 114
E+RK ++++ K A+E + P + ++ + + P DD+ +AG
Sbjct: 20 ERRKAIESKKEKLKNAVESNKPLPTELRTEALKLQDSLEWDLSAPLSHNAEDDEYRWAG- 78
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
PKI+ITT S+ F EL + PN+ RGTYDLK++I
Sbjct: 79 -----------VTDPKIVITTTHDPSSSLKQFAKELKLLFPNAQKMNRGTYDLKELITAC 127
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVL 234
+ D T I+V R +PD L+I LP GPTA+F + V+R +I + G + P L+
Sbjct: 128 RANDVTDFIIVQETRGKPDGLVISHLPYGPTAYFTIYNAVMRHEIPDIGTMSEAYPHLLF 187
Query: 235 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
NNF T LG RV ++++ LFP P+ +RV++F N D+I FRHH
Sbjct: 188 NNFTTNLGIRVEKILKYLFP-VPKENSKRVISFANVDDYILFRHH 231
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGG-EFEWVHKPEMDTSRRRFFL 390
LQE GPRF LKL ++ G+ D + EW KP M+TSR+R FL
Sbjct: 242 LQEVGPRFELKLYDIKLGSIDEAAALDSEWSLKPFMNTSRKRLFL 286
>gi|47214978|emb|CAG01312.1| unnamed protein product [Tetraodon nigroviridis]
Length = 330
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 115/219 (52%), Gaps = 17/219 (7%)
Query: 64 KKLKARDAAEKRAL---ELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFS 120
KK K + A E+ L EL E A + +E E E V DDE D
Sbjct: 27 KKQKVKKALEENYLLPTELRRE--ALQLQKLVEYDDEGAEGVSSHMDDEYKWAGVED--- 81
Query: 121 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 180
PK+++TT R S+R F E+ + P + RG +++ +++ + + T
Sbjct: 82 --------PKVMVTTSRDPSSRLKMFAKEVKLMFPGAQRMNRGNHEIPALVQACRANNVT 133
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 240
+++VH R +PD L++ LP GPTA+F L +V+R D+ + G + P L+ +NF ++
Sbjct: 134 DLVIVHETRGQPDGLVVCHLPFGPTAYFTLYNVVMRHDVPDIGTMSEAFPHLIFHNFTSQ 193
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
LG RV +++ LFP P+ RRV+TF NQ DFI FRHH
Sbjct: 194 LGQRVSNILKYLFP-VPKEDSRRVITFANQEDFISFRHH 231
>gi|341897969|gb|EGT53904.1| hypothetical protein CAEBREN_02620 [Caenorhabditis brenneri]
Length = 292
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 108/195 (55%), Gaps = 8/195 (4%)
Query: 91 TIENTREPDETVCRPDDDELFAGNDAD----EFSSILKQGCA--PKILITTCRFNSNRGP 144
+EN + D + R D EL G+D E S + A PK++ITT R S+R
Sbjct: 35 ALENNTKIDYNL-RKDAIELAKGSDWGGQQYEVDSEYRWAGAQDPKVVITTSRDPSSRLK 93
Query: 145 AFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGP 204
F E+ + PN+ RG YD+K++++ K +D T +I+ R PD +L+ LP GP
Sbjct: 94 MFAKEMKLIFPNAQRINRGHYDVKQVVQACKAQDSTDLIIFTETRGNPDGMLVCHLPFGP 153
Query: 205 TAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 264
TA F ++ +V+R DI N G + P L+ +N ++LG R +++ LFP P+ +R+
Sbjct: 154 TAFFSMANVVMRHDIPNCGTMSEQYPHLIFDNLNSKLGQRFTTILKHLFP-VPKPDSKRI 212
Query: 265 VTFHNQRDFIFFRHH 279
+TF N D++ FRHH
Sbjct: 213 ITFSNTEDYVSFRHH 227
>gi|198430292|ref|XP_002129644.1| PREDICTED: similar to LOC549383 protein [Ciona intestinalis]
Length = 288
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI++TT R S++ F E+ + PNS RG +++K ++ + D T I++H +
Sbjct: 83 PKIMVTTSRDPSSKLKQFAKEVKLIFPNSQRLNRGNHEMKALVAACRANDVTDFIILHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD L+I LP GPTA+F +S V+R DI + G + P L+ +NF ++LG RV +
Sbjct: 143 RGNPDGLIISHLPYGPTAYFNISGCVMRHDIPDVGTMSEVYPHLIFHNFKSKLGERVKTI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+Q+LFP P+ +R ++F N+ DFI FRHH
Sbjct: 203 LQALFP-VPKDESKRTISFINEDDFISFRHH 232
>gi|410929513|ref|XP_003978144.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Takifugu rubripes]
Length = 316
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI++TT R S+R F E+ + P + RG +++ +++ + + T ++++H
Sbjct: 108 PKIMVTTSRDPSSRLKMFAKEVKLMFPGAQRMNRGNHEIPALVQACRANNVTDLVIMHET 167
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R +PD L++ LP GPTA+F L +V+R D+ + G + P L+ +NF ++LG RV +
Sbjct: 168 RGQPDGLVVCHLPFGPTAYFTLYNVVMRHDVPDIGTMSEAFPHLIFHNFTSQLGRRVSNI 227
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RRVVTF NQ DFI FRHH
Sbjct: 228 LKYLFP-VPKEDSRRVVTFANQEDFISFRHH 257
>gi|401884616|gb|EJT48769.1| rRNA primary transcript binding protein [Trichosporon asahii var.
asahii CBS 2479]
gi|406694214|gb|EKC97546.1| rRNA primary transcript binding protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 287
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 120/260 (46%), Gaps = 58/260 (22%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+++TT R S+R F EL PN+ RG +K +++ + T +++VH +
Sbjct: 82 PKVVVTTSRDPSSRLTQFAKELRLCFPNAIRLNRGNTVMKDLVQTCLSQGVTDLVLVHEH 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG-HIPELVLNNFATRLGHRVGR 247
R PDA+++ LP GPT L+ + LR D+ + P L+++ F TRLG RV
Sbjct: 142 RGVPDAMIVSHLPHGPTLSMTLNNVTLRHDVATSDSTVSEQYPHLIMDGFTTRLGERVAS 201
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFC 307
++++LFP P+ +RV+TF NQ DFI FRH
Sbjct: 202 ILKALFP-VPKDDAKRVMTFANQNDFISFRH----------------------------- 231
Query: 308 YYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 367
++F KTS + V +L E GPRF K ++ GT D
Sbjct: 232 -----HVFA--------------------KTSHKDV--QLAEVGPRFEAKPYEIRQGTVD 264
Query: 368 TKGGEFEWVHKPEMDTSRRR 387
+ EW+ +P M TS++R
Sbjct: 265 QTEADVEWLLRPYMRTSKKR 284
>gi|16768354|gb|AAL28396.1| GM02712p [Drosophila melanogaster]
Length = 298
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 60/267 (22%)
Query: 126 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 184
GC PKI++TT S+R F+ EL +IPN+ RG Y L ++ + + T ++
Sbjct: 77 GCEDPKIMLTTSHNPSSRLKMFMKELRLIIPNAQQMNRGNYQLTTLMHACRANNVTDFLI 136
Query: 185 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 244
VH +R D+L++ LP GPTA F +S +V+R DI + G+ + P L+ NNF T +G R
Sbjct: 137 VHEHRGILDSLVVCHLPYGPTAFFNISDVVMRHDIPDIGHMSEQKPHLIFNNFKTPIGLR 196
Query: 245 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMK 304
++++ LFP P+ +RV++F N D I
Sbjct: 197 TVKILKHLFP-VPKENSQRVMSFLNHNDSII----------------------------- 226
Query: 305 AFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 364
F +++ +Y+ + E L E GPRF+LKL ++ G
Sbjct: 227 -FRHHQYKYVNKELE---------------------------LTEVGPRFSLKLYQIKLG 258
Query: 365 TFDT-KGGEFEWVHKPEMDTSRRRFFL 390
T + K + EW+++P M+TS++R
Sbjct: 259 TLENIKAADTEWINRPYMNTSQKRLIF 285
>gi|170586022|ref|XP_001897780.1| Brix domain containing protein [Brugia malayi]
gi|158594804|gb|EDP33383.1| Brix domain containing protein [Brugia malayi]
Length = 292
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 101/171 (59%), Gaps = 5/171 (2%)
Query: 109 ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLK 168
E+ A +D ++S PK+++TT R S + F+ E+ + PN+ RG YD+K
Sbjct: 63 EVLAIDDEYRYAS----AVDPKVVLTTSREPSAKLKIFLKEMRLMFPNAQRINRGHYDIK 118
Query: 169 KIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH 228
K+I+ K D T I+++ R PD +++ LP GPTA+F L+ +V+R ++ + G +
Sbjct: 119 KLIQACKANDITDFILLYETRGNPDGMIVCHLPFGPTAYFTLANVVMRHEVPDCGTMSEE 178
Query: 229 IPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
P L+ ++ + LG R+ +++ LFP P+ RR+VTF N +DFI FRHH
Sbjct: 179 YPHLIFDSLNSALGRRLTTILKHLFP-VPKIDSRRIVTFSNTQDFISFRHH 228
>gi|224075818|ref|XP_002304782.1| predicted protein [Populus trichocarpa]
gi|222842214|gb|EEE79761.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 94/155 (60%), Gaps = 6/155 (3%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKIL+TT R S F+ EL V PN+ RG + +IIE + D+T +I+VH +
Sbjct: 83 PKILLTTSRDPSAPLTQFVKELKFVFPNAERINRGGQVISEIIESCRAHDYTDVILVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN----PTGHIPELVLNNFATRLGHR 244
R PD L+I LP GPTA+F+L +V R DIK+ P H P L+LNNF ++LG R
Sbjct: 143 RGVPDGLVICHLPFGPTAYFELLNVVTRHDIKDKKAIGTMPEAH-PHLILNNFKSKLGER 201
Query: 245 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ LFP P+ +R++TF NQ D+I FRHH
Sbjct: 202 TANILKHLFPM-PKPDTKRIITFANQSDYISFRHH 235
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L+E GPRF ++L ++ GT D + EWV +P M+T+++R F+
Sbjct: 248 LKEIGPRFEMRLYQIKLGTVDQTEAQNEWVLRPYMNTTKKRKFI 291
>gi|349806195|gb|AEQ18570.1| putative u3 small nucleolar [Hymenochirus curtipes]
Length = 217
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 93/150 (62%), Gaps = 1/150 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI++TT R S+R F EL + PN+ RG +++ +++ +K D T +++VH +
Sbjct: 43 PKIMVTTSRDPSSRLKMFAKELRLIFPNAQRMNRGNHEVSALVQASKANDVTDLLIVHEH 102
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD L++ LP GPTA+F L +V+R DI + G + P L+ +NF +RLG RV +
Sbjct: 103 RGMPDGLIVCHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAFPHLIFHNFTSRLGQRVSNI 162
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
++ LFP P+ +RVVTF NQ D+I F +
Sbjct: 163 MKYLFP-VPKDDSKRVVTFANQDDYISFLY 191
>gi|443700555|gb|ELT99436.1| hypothetical protein CAPTEDRAFT_19360 [Capitella teleta]
Length = 334
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 124/225 (55%), Gaps = 8/225 (3%)
Query: 56 HQKKVEKRKKLKA-RDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGN 114
++K VE+R+K K + K+++E +E P + +E ++ V D E
Sbjct: 54 YRKTVEQREKAKQEKRQLIKKSIEENKEIPNELKAEALE----IEKNVAWGDGQEGGTSI 109
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
DE+ + PK+++TT R S++ F E+ + PNS RG Y++ ++++
Sbjct: 110 IDDEYRWAGVED--PKLVVTTSRDPSSKLKQFAKEIKLIFPNSQRINRGKYEMNQLVQAC 167
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVL 234
+ D T +I++ +R PD +LI LP GPTA+F LS V+R DI + G + P LV
Sbjct: 168 RANDVTDLIILTEHRGNPDGMLISHLPYGPTAYFNLSNAVMRHDIPDIGTMSEAYPHLVF 227
Query: 235 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+ F+++LG RV +++ LFP P+ +R++TF N D+I FRHH
Sbjct: 228 HKFSSKLGARVRNILKYLFP-VPKEDSKRIITFANDDDYISFRHH 271
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 390
K S+ K I L E GPRF +KL + GT + + EWV+KP M T+++R FL
Sbjct: 274 KRSETKEIV-LDEVGPRFEMKLFKIVLGTIEMADSADIEWVYKPYMRTTKKRKFL 327
>gi|145356846|ref|XP_001422635.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582878|gb|ABP00952.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 291
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 121/260 (46%), Gaps = 58/260 (22%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P++L+TT R S+R F EL + P S RG+ L +++ + FT +++VH +
Sbjct: 85 PRVLLTTSRDPSSRLQQFAKELKLLFPTSQRINRGSQILPDLVDLCRNGGFTDLVMVHEH 144
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPELVLNNFATRLGHRVG 246
R EPD L+I LP GPT +F LS V+R DIK+ G+ + P L+L NF + LG R
Sbjct: 145 RGEPDGLVISHLPFGPTCYFGLSNTVMRHDIKDQDIGHVSEVFPHLILENFTSPLGKRTA 204
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAF 306
+++ LFP+ P+ + +RVVTF N D+I RHH
Sbjct: 205 TVLKHLFPE-PKAKSKRVVTFANDADYISLRHH--------------------------- 236
Query: 307 CYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 366
YE K AKS L E GPRF ++L ++ GT
Sbjct: 237 -MYEM------------------PKGAKS---------VALTEIGPRFEMRLYQIKLGTV 268
Query: 367 DTKGGEFEWVHKPEMDTSRR 386
+ + EW +P M + ++
Sbjct: 269 EMDDCDIEWSLRPFMRSGKK 288
>gi|312065971|ref|XP_003136047.1| brix domain-containing protein [Loa loa]
gi|307768782|gb|EFO28016.1| brix domain-containing protein [Loa loa]
Length = 291
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 91/154 (59%), Gaps = 1/154 (0%)
Query: 126 GCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVV 185
PK+++TT R S + F+ E+ + PN+ RG YD+KK+I+ K D T I++
Sbjct: 75 AADPKVVLTTSREPSAKLKIFLKEMRLMFPNAQRINRGHYDIKKLIQACKANDITDFILL 134
Query: 186 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRV 245
H R PD +++ LP GPTA+F L+ +V+R ++ G + P L+ + + LG R+
Sbjct: 135 HETRGNPDGMIVCHLPFGPTAYFTLANVVMRHEVPECGTMSEEYPHLIFDGLNSALGRRL 194
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ LFP P+ RR+VTF N +DFI FRHH
Sbjct: 195 TTILKHLFP-VPKIDSRRIVTFSNTQDFISFRHH 227
>gi|388583068|gb|EIM23371.1| Brix-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 288
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 93/156 (59%), Gaps = 3/156 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKILITT R S+R F EL V PNS + RG Y +K+I + A+ T +I++H
Sbjct: 82 PKILITTARDPSSRLTTFAKELRLVFPNSIRFNRGNYVVKEIADAARANQVTDLIIIHET 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 246
R +PDALL+ P GPT F L+ + LR D+ + T P L+ NF+++LG+R+
Sbjct: 142 RGKPDALLLSHFPHGPTVTFTLNNVQLRHDLAGSLDSTVSEQYPHLIFENFSSKLGNRIM 201
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
++ LFP P+ +RV+TF+N DFI FRHH V
Sbjct: 202 NTLKYLFP-VPKEDSKRVMTFYNDADFISFRHHVYV 236
>gi|308811002|ref|XP_003082809.1| putative U3 snoRNP protein IMP4 (ISS) [Ostreococcus tauri]
gi|116054687|emb|CAL56764.1| putative U3 snoRNP protein IMP4 (ISS) [Ostreococcus tauri]
Length = 369
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 121/260 (46%), Gaps = 58/260 (22%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P++L+TT R S+R F EL + P S RG+ L +++ + FT +++VH +
Sbjct: 163 PRVLLTTSRDPSSRLQQFAKELKLLFPTSQRINRGSQILPDLVDLCRNGGFTDLVMVHEH 222
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPELVLNNFATRLGHRVG 246
R EPD L+I LP GPT +F +S V+R DIK+ G+ + P L+L NF T LG R
Sbjct: 223 RGEPDGLVISHLPFGPTCYFGISNTVMRHDIKDQDLGHVSEVFPHLILENFTTPLGQRTA 282
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAF 306
+++ LFP+ P+ + +RVVTF N D+I RHH
Sbjct: 283 TVLKHLFPE-PKAKSKRVVTFANDADYISLRHH--------------------------- 314
Query: 307 CYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 366
YE K AKS L E GPRF ++L ++ GT
Sbjct: 315 -TYEM------------------PKGAKS---------VALTEIGPRFEMRLYQIKLGTA 346
Query: 367 DTKGGEFEWVHKPEMDTSRR 386
+ + EW +P M + ++
Sbjct: 347 EQDDCDIEWSLRPFMRSGKK 366
>gi|390601333|gb|EIN10727.1| Brix-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 304
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 133/244 (54%), Gaps = 19/244 (7%)
Query: 44 KEKRSAVHAK-LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETV 102
+E+R V+AK L+ Q++ +K + +DA L G++ P + + R+
Sbjct: 7 RERRQYVYAKSLEAQERQTYERKQRIKDA-----LASGKQLPTELRKDAKDLGRD----- 56
Query: 103 CRPDDDELFAGNDAD-EFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
DD + N D E+S + G PKI++TT R S++ F E+ V PNSH
Sbjct: 57 LAFDDAQTKPSNHVDNEYS---RAGMEDPKIIVTTSRDPSSKLLQFAKEMRLVFPNSHRI 113
Query: 161 KRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 220
RG Y +K++ + + D T ++++H +R PDA+++ P GPT +F L + LR DI
Sbjct: 114 NRGNYVVKELADACRANDVTDLVILHEHRGTPDAMIVSHFPHGPTVYFSLHNVTLRHDIA 173
Query: 221 NHGNPT--GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
++ + T P L+ NF+++LG R+ +++ LFP P+ +RV+TF N+ DFI FRH
Sbjct: 174 SYKSSTVSEQYPHLIFENFSSKLGERIRDVLKYLFP-VPKEDSKRVMTFANENDFISFRH 232
Query: 279 HRCV 282
H V
Sbjct: 233 HVFV 236
>gi|260943193|ref|XP_002615895.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238851185|gb|EEQ40649.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 285
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 152/351 (43%), Gaps = 78/351 (22%)
Query: 44 KEKRSAVHAK---LKHQKKVEKRKKLKARDAAEK-RALELGEEPPARMTPRTIENTREPD 99
+E+R ++ K L+ Q ++EKR+KLKA A+ K + EL E+ R D
Sbjct: 7 RERREYLYKKSLELQEQAQLEKRQKLKAALASGKPLSKELSEDVELHKNFRF-------D 59
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
E+ DDE A + ++ P+I++TT R S + F E+ + PNS
Sbjct: 60 ESEQAEIDDEYSALSGVND----------PRIIVTTSRNPSVKLLQFSKEIKLMFPNSMK 109
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
RG Y + ++++ + +IV+H +R P +L + P GP+A F L + LR D+
Sbjct: 110 LNRGNYIIPELVKSCARAAINDLIVLHEHRGVPTSLTVSHFPHGPSAIFTLHNVKLRHDL 169
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
N GN + P L+ NF TRLG RV ++++ LFP + RV+TF N DFI RHH
Sbjct: 170 PNIGNISEVYPHLIFENFTTRLGQRVVKILKHLFPPGAKKDSSRVITFINNDDFISVRHH 229
Query: 280 RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS 339
V K KD
Sbjct: 230 VYV----------------------------------------------KTKDG------ 237
Query: 340 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L E GPRF +KL L+ G D K + EW + + T+ R+ +L
Sbjct: 238 -----VELSEVGPRFEMKLYELRLGLIDNKDADVEWKVRRFVRTANRKNYL 283
>gi|118483045|gb|ABK93432.1| unknown [Populus trichocarpa]
Length = 293
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 94/155 (60%), Gaps = 6/155 (3%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKIL+TT R S F+ EL V PN+ RG + +IIE + D+T +I+VH +
Sbjct: 83 PKILLTTSRDPSAPLTQFVKELKFVFPNAERINRGGQVISEIIESCRAHDYTDVILVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN----PTGHIPELVLNNFATRLGHR 244
R PD L+I +P GPTA+F+L +V R DIK+ P H P L+LNNF ++LG R
Sbjct: 143 RGVPDGLVICHIPFGPTAYFELLNVVTRHDIKDKKAIGTMPEAH-PHLILNNFKSKLGER 201
Query: 245 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ LFP P+ +R++TF NQ D+I FRHH
Sbjct: 202 TANILKHLFPM-PKPDTKRIITFANQSDYISFRHH 235
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L+E GPRF ++L ++ GT D + EWV +P M+T+++R F+
Sbjct: 248 LKEIGPRFEMRLYQIKLGTVDQTEAQNEWVLRPYMNTTKKRKFI 291
>gi|224053310|ref|XP_002297757.1| predicted protein [Populus trichocarpa]
gi|222845015|gb|EEE82562.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 93/154 (60%), Gaps = 4/154 (2%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKIL+TT R S F+ EL V PN+ RG + +IIE + D+T +I+VH +
Sbjct: 83 PKILLTTSRDPSAPLTQFVKELKFVFPNAERINRGGQVISEIIESCRAHDYTDVILVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELVLNNFATRLGHRV 245
R PD L+I LP GPTA+F+L +V R DIK+ G P L+LNNF ++LG R
Sbjct: 143 RGVPDGLVICHLPFGPTAYFELLNVVTRHDIKDKKAIGTMPEAPPHLILNNFKSKLGERT 202
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ LFP P+ +R++TF NQ D+I FRHH
Sbjct: 203 ANILKHLFPM-PKPDTKRIITFANQSDYISFRHH 235
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L+E GPRF ++L ++ GT D + EWV +P M+T+++R F+
Sbjct: 248 LKEIGPRFEMRLYQIKLGTVDQTEAQNEWVLRPYMNTTKKRKFI 291
>gi|340376217|ref|XP_003386630.1| PREDICTED: u3 small nucleolar ribonucleoprotein protein IMP4-like
[Amphimedon queenslandica]
Length = 292
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 117/221 (52%), Gaps = 10/221 (4%)
Query: 61 EKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFA--GNDADE 118
EK++ + R K+A++ G R P I E + DD+E ++ DE
Sbjct: 20 EKQRAIHERKEKLKKAIDEG-----RRIPTEIRKETEQLRHSIQFDDEERLGLTTHEDDE 74
Query: 119 FSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKD 178
++ + P ++ITT S+ F+ EL VIPNS RG + + K++E
Sbjct: 75 YAWAGVED--PNVVITTSHNPSSSLKQFVKELRLVIPNSQRINRGQFVIGKLVEACNANG 132
Query: 179 FTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFA 238
T +I+VH +R PD+L++ LP GPTA F + V+R DI N G + P L+ +NF
Sbjct: 133 ATDLIIVHEHRGVPDSLIVCHLPYGPTATFTIFNTVMRHDIPNIGTMSEAYPHLIFHNFK 192
Query: 239 TRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
T+LG RV +++ LFP P+ +RV+TF N D+I FRHH
Sbjct: 193 TKLGERVTNILKYLFP-VPKEDSKRVITFANSEDYISFRHH 232
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 346 RLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+L+E GPRF LKL + GT D K + EW +P ++T++++ L
Sbjct: 242 QLKEVGPRFELKLFKISLGTIDQKDVDVEWKLRPYLNTAKKKLAL 286
>gi|390343451|ref|XP_003725879.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Strongylocentrotus purpuratus]
Length = 290
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI++TT R S++ F EL ++PN+ RG Y++ ++++ + D T +I+VH +
Sbjct: 82 PKIMLTTSRDPSSKLKQFAKELKLILPNAQRLNRGNYEIGQLVQACRANDVTDLIMVHEH 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PDAL I LP GPTA F L VLR DI G + P L+ NNF ++LG RV +
Sbjct: 142 RGVPDALQICHLPYGPTAFFTLFNPVLRHDIPKIGTMSEAYPHLIFNNFKSKLGERVMSI 201
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +RV+TF N D I FRHH
Sbjct: 202 LKYLFP-VPKEDSKRVITFANDDDSISFRHH 231
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRR 387
L E GPRF +KL ++ GT D + E EWV +P M+T+++R
Sbjct: 243 LIEVGPRFEMKLYEIRLGTIDQSNTAEVEWVSRPYMNTAKKR 284
>gi|355717137|gb|AES05835.1| brix domain containing 5 [Mustela putorius furo]
Length = 102
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 83/154 (53%), Gaps = 56/154 (36%)
Query: 224 NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVP 283
+PT HIPE++LNNF TRLGH VGR+ SLFP +P+F GR+V TFHNQRD+IFFR H
Sbjct: 5 DPTEHIPEIILNNFTTRLGHSVGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFH---- 60
Query: 284 LEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKV 343
RYIF++++ G
Sbjct: 61 ----------------------------RYIFKSEKKVG--------------------- 71
Query: 344 ITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH 377
+QE GPRFTLKL SLQ GTFD+K GE+EWVH
Sbjct: 72 ---IQELGPRFTLKLRSLQKGTFDSKYGEYEWVH 102
>gi|170090818|ref|XP_001876631.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648124|gb|EDR12367.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 303
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 93/156 (59%), Gaps = 3/156 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S++ F EL V P SH RG Y +K++ E + + T +IV+H +
Sbjct: 82 PKIVITTSRDPSSKLLQFTKELRLVFPGSHRINRGNYVVKELAEACRANEVTDLIVLHEH 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 246
R PDA+++ P GPT +F L+ + LR DI + N T P L+ NF++RLG RV
Sbjct: 142 RGIPDAMIVSHFPHGPTVYFTLNNVALRHDIGTYKNSTVSEQYPHLIFENFSSRLGERVR 201
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
+++ LFP P+ +RV+TF N DFI FRHH V
Sbjct: 202 DVLKYLFP-VPKEDSKRVMTFANDDDFISFRHHVFV 236
>gi|209489462|gb|ACI49221.1| hypothetical protein Csp3_JD05.006 [Caenorhabditis angaria]
Length = 291
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F E+ V PNS RG YD+K++++ + +D T +IV+
Sbjct: 78 PKIVITTSRDPSSRLKMFSKEMRLVFPNSQRINRGHYDVKQLVQACRAQDTTDLIVLTET 137
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R +PD L++ LP GPTA F ++ +V+R DI N G + P L+ N ++LG R +
Sbjct: 138 RGQPDGLIVCHLPFGPTAFFSMANVVMRHDIPNCGTMSEQYPHLIFNKLDSKLGLRFTSI 197
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +RV+TF N D++ +RHH
Sbjct: 198 LKHLFP-VPKSDSKRVMTFANTDDYLSYRHH 227
>gi|385302644|gb|EIF46768.1| u3 small nucleolar ribonucleoprotein imp4 [Dekkera bruxellensis
AWRI1499]
Length = 288
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 120/231 (51%), Gaps = 15/231 (6%)
Query: 53 KLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTP-RTIENTREPDETVCRPDDDELF 111
+LK + K+EKR +L +AL G+ + + ++ DET+ + +++
Sbjct: 19 QLKEEAKIEKRHQLA-------QALATGKNLSKDIADDQQLQKDFLYDETIQKENEE--- 68
Query: 112 AGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII 171
D+ + L PK++ITT R S R F E+ +IPNS RG Y + ++
Sbjct: 69 ----VDDEYARLSGFVEPKVVITTSRSPSARLSQFTKEMRLMIPNSIRINRGNYIMPALV 124
Query: 172 EYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPE 231
E K+ T I+V+H +R P L + LP GPTA F L +VLR DI N GN + P
Sbjct: 125 ESCKRSGITDIVVIHEHRGVPSTLTVSHLPYGPTAVFTLHNVVLRHDIYNVGNISEAYPH 184
Query: 232 LVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
L+ NF T+LG R+ +++++FP + RV++F N+ DF+ R H V
Sbjct: 185 LIFENFTTKLGQRISTILKNIFPPGVKKESPRVISFVNKNDFVSVRQHLYV 235
>gi|268553967|ref|XP_002634971.1| Hypothetical protein CBG13507 [Caenorhabditis briggsae]
Length = 292
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 109/194 (56%), Gaps = 8/194 (4%)
Query: 92 IENTREPDETVCRPDDDELFAGNDAD----EFSSILKQGCA--PKILITTCRFNSNRGPA 145
+EN + D + R D EL G+D E S + A PKI+ITT R S+R
Sbjct: 36 LENNTKIDYNL-RKDAIELAKGSDWGGQQYEVDSEYRWAGAQDPKIVITTSRDPSSRLKM 94
Query: 146 FISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPT 205
F E+ + PN+ RG YD+K++++ K +D T +I++ R PD +++ LP GPT
Sbjct: 95 FSKEMKLIFPNAQRINRGHYDVKQVVQACKAQDSTDLIILTETRGNPDGMIVCHLPFGPT 154
Query: 206 AHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 265
A F ++ +V+R DI N G + P L+ +N ++LG R +++ LFP P+ +R++
Sbjct: 155 AFFTMANVVMRHDIPNCGTMSEQYPHLIFDNLNSKLGQRFTTILKHLFP-VPKPDSKRIM 213
Query: 266 TFHNQRDFIFFRHH 279
TF N D++ FRHH
Sbjct: 214 TFSNVDDYVSFRHH 227
>gi|167388707|ref|XP_001738664.1| brix domain-containing protein ZK795.3 [Entamoeba dispar SAW760]
gi|167389361|ref|XP_001738928.1| brix domain-containing protein ZK795.3 [Entamoeba dispar SAW760]
gi|165897595|gb|EDR24693.1| brix domain-containing protein ZK795.3, putative [Entamoeba dispar
SAW760]
gi|165897974|gb|EDR24984.1| brix domain-containing protein ZK795.3, putative [Entamoeba dispar
SAW760]
Length = 286
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 120/262 (45%), Gaps = 57/262 (21%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P + ITT + S++ F+ E+ +IPNS RG +K+++E + D T +I+VH N
Sbjct: 82 PNVFITTSKDPSSKLKEFVKEIKLIIPNSTRINRGNIQIKQLVETCRSHDVTDLIIVHEN 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R EPD ++I P GPTA+F L +V R + K + P L+ +N T LG R +
Sbjct: 142 RGEPDGMIISHFPYGPTAYFGLYNVVSRHETKTSKTFSEVYPHLIFDNLTTPLGKRFEMI 201
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCY 308
++ LFP P+ +RV+TF N D+I FRHH A+ Y
Sbjct: 202 LKYLFP-VPKSDSKRVMTFSNSSDYITFRHH-------------------------AYDY 235
Query: 309 YECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT 368
E Q +++ LQE GPRF L+ ++ GT D
Sbjct: 236 NE-----------------------------QHQLV--LQEIGPRFDLRPYQIKLGTIDM 264
Query: 369 KGGEFEWVHKPEMDTSRRRFFL 390
E EW+ + ++++ R L
Sbjct: 265 DYAENEWILRSFINSATTRKLL 286
>gi|255087308|ref|XP_002505577.1| predicted protein [Micromonas sp. RCC299]
gi|226520847|gb|ACO66835.1| predicted protein [Micromonas sp. RCC299]
Length = 289
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 92/153 (60%), Gaps = 3/153 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+L+TT R S+R F+ E+ ++P + RG L ++E + DFT ++VVH +
Sbjct: 83 PKVLVTTSRDPSSRLTQFVKEVKLLMPTAQRINRGAQVLPDLVELCRSNDFTDLVVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPELVLNNFATRLGHRVG 246
R EPD ++I +P GPTA+F +S V+R DIK+ G + P L+L NF T LG R
Sbjct: 143 RGEPDGMVISHMPFGPTAYFGISSTVMRHDIKDEDIGTVSEANPHLILENFTTALGKRTA 202
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ LF P+ + +RV+TF N D+I RHH
Sbjct: 203 NILKHLF-APPKGKSKRVITFANNADWISLRHH 234
>gi|330799514|ref|XP_003287789.1| hypothetical protein DICPUDRAFT_33009 [Dictyostelium purpureum]
gi|325082199|gb|EGC35689.1| hypothetical protein DICPUDRAFT_33009 [Dictyostelium purpureum]
Length = 287
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 110/206 (53%), Gaps = 6/206 (2%)
Query: 74 KRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILI 133
K+AL+ G+ P + ++ DE D E + DE++ Q PK+ I
Sbjct: 33 KKALDEGKPIPTELVDFEFKHR---DEIKLDKIDQEKSPSSIDDEYARAGIQD--PKVFI 87
Query: 134 TTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPD 193
TT R S R F EL + PNS RG + +K++++ + D T +++ H +R EP
Sbjct: 88 TTSREPSARLIQFSKELKMMFPNSQKMNRGAHVMKELVDACRANDVTDLVIAHEHRGEPV 147
Query: 194 ALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLF 253
L++ LP GPTA+F++ V+ DI++ P+ P L+ NNF T LG R +++ LF
Sbjct: 148 GLVVSHLPYGPTAYFEIKNCVMIHDIEDSSPPSLAFPHLIFNNFTTPLGERTENILKYLF 207
Query: 254 PQSPEFRGRRVVTFHNQRDFIFFRHH 279
P P+ RRV+TF N DFI FRHH
Sbjct: 208 P-VPKEDSRRVITFSNDNDFISFRHH 232
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 336 EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
EK + +I L+E GPRF LKL +Q GT + + EWV++P M++S+ R F+
Sbjct: 235 EKDGHKNII--LKEIGPRFELKLYKIQLGTVEQDEADLEWVYRPYMNSSKNRTFI 287
>gi|327263907|ref|XP_003216758.1| PREDICTED: u3 small nucleolar ribonucleoprotein protein IMP4-like
[Anolis carolinensis]
Length = 294
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P+I++TT R S+R F E+ V P + RG +++ ++ K T +++VH +
Sbjct: 86 PRIMVTTSRDPSSRLKMFAKEIKLVFPGAQRMNRGRHEMGALVRACKANGVTDLLIVHEH 145
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD L++ LP GPTA+F L +V+R DI + G + P L+ +NF +RLG RV +
Sbjct: 146 RGVPDGLIVSHLPFGPTAYFTLCNVVMRHDIPDIGTMSEAHPHLIFHNFTSRLGQRVSSI 205
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +RV+TF NQ D+I FRHH
Sbjct: 206 LKYLFP-VPKEDSKRVITFANQEDYISFRHH 235
>gi|345320319|ref|XP_001521028.2| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like,
partial [Ornithorhynchus anatinus]
Length = 262
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 105/194 (54%), Gaps = 16/194 (8%)
Query: 90 RTIENTRE----PDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPA 145
R IE+ +E + VC DDE D PKI+ITT R S+R
Sbjct: 22 RAIEDKKERLKKALDGVCSHVDDEYRWAGVED-----------PKIMITTSRDPSSRLKM 70
Query: 146 FISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPT 205
F EL V P + RG +++ +++ K T +++VH +R P L++ LP GPT
Sbjct: 71 FAKELKLVFPGAQRMNRGRHEVGSLVQACKANGVTDLLMVHEHRGTPVGLIVCHLPFGPT 130
Query: 206 AHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 265
A+F L +V+R DI + G + +P L+L+ F++RLG RV +++ LFP P+ R++
Sbjct: 131 AYFTLCNVVMRHDIPDLGTMSEALPHLILHGFSSRLGQRVSGILKYLFP-VPKEDSHRII 189
Query: 266 TFHNQRDFIFFRHH 279
TF NQ D+I FRHH
Sbjct: 190 TFANQDDYISFRHH 203
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF +KL ++ GT + + E EW P +T+R+R FL
Sbjct: 215 LSEVGPRFEMKLYMIKLGTLENENTAEVEWRWHPYTNTARKRKFL 259
>gi|123500025|ref|XP_001327749.1| Brix domain containing protein [Trichomonas vaginalis G3]
gi|121910683|gb|EAY15526.1| Brix domain containing protein [Trichomonas vaginalis G3]
Length = 267
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 139/309 (44%), Gaps = 65/309 (21%)
Query: 85 ARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGP 144
+R R +EN T+ D + DE + G KI +T + G
Sbjct: 21 SRQEDRRVENV-----TIIPEHDPDFQEEAMLDELEPFISGGKQAKIKVTLSTYEEEEGA 75
Query: 145 A-FISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDG 203
F L +IPN Y+ R A ++ FT ++ + + +++ + LP+G
Sbjct: 76 VKFAHALEQLIPNCEYHPREGEPFDLTRSRAYEEGFTDLLTLIPHEDTVFSMIHVHLPNG 135
Query: 204 PTAHFKLSKLVLRKDIKNHGN--PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRG 261
P AH++L+K+ L ++I H PT + PE++L F T LG + GR++++LFP +P+F G
Sbjct: 136 PCAHWRLTKIKLPEEIGGHPKKLPTSY-PEIILKRFTTSLGKQCGRMLRALFPANPQFEG 194
Query: 262 RRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESK 321
RRVVTFH QRDF+F R + +Y+FE
Sbjct: 195 RRVVTFHQQRDFVFCRSY--------------------------------QYLFE----- 217
Query: 322 GSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEM 381
S KV T E GPRFTL+L+ +Q G ++ G++ + +
Sbjct: 218 -----------------SADKVKT--VEIGPRFTLRLLWMQEGPYNPASGQYTFYRRIRN 258
Query: 382 DTSRRRFFL 390
DT+RR ++L
Sbjct: 259 DTTRRTWWL 267
>gi|412991168|emb|CCO16013.1| predicted protein [Bathycoccus prasinos]
Length = 291
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 97/169 (57%), Gaps = 7/169 (4%)
Query: 113 GNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 172
G + DE+ K KIL+TT R S+R F EL + P S RG+ L ++E
Sbjct: 73 GVNDDEY----KNAPEAKILLTTSRDASSRLLQFCKELKLLFPTSSRINRGSQILPDLVE 128
Query: 173 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP--TGHIP 230
K +FT +++VH +R EPD L++ LP GPTA+F +S V+R D+K+ P + P
Sbjct: 129 LGKTSEFTDVVIVHEHRGEPDGLVVSHLPFGPTAYFGISDAVMRHDVKDANLPKVSEQFP 188
Query: 231 ELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ NF + LG R +++ LFP+ P+ + +RVVTF N DFI RHH
Sbjct: 189 HIICENFTSELGKRTANILRHLFPR-PKEKSKRVVTFANSVDFISVRHH 236
>gi|328853172|gb|EGG02312.1| hypothetical protein MELLADRAFT_117561 [Melampsora larici-populina
98AG31]
Length = 518
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 165/390 (42%), Gaps = 110/390 (28%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTRE- 97
S I NK +RS V +L+H K K + AR AE L + PRTIENTRE
Sbjct: 8 SQIANKAQRSKVLQRLRHDKLQAKLSERVARKKAEAADPSLKVKRLKENIPRTIENTREW 67
Query: 98 ----------------------------------------------PDETVCRPDDDELF 111
E + P+ +
Sbjct: 68 LGDQREDERLMPVKVEMGDENQEGYEEIKLDMGRLADLFEPYNNQNASEALTEPEAQDPT 127
Query: 112 AGND-----ADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY-----K 161
A D DE +S K+ ++LITT S AFI EL ++ H K
Sbjct: 128 AEPDLEENFEDESASTPKEN---RVLITTSPRPSLFTQAFIHELANLFGGKHRADVIPRK 184
Query: 162 RGTYDLKKIIEYAKKKDFTSIIVVHT-----NRREPDALLIIGLPDGPTAHFKLSKLVLR 216
++L ++ ++A ++ ++S++V+ NR P + + LP GPTA+F+L+ +V
Sbjct: 185 TKRFELSRVCKWAIERGYSSMVVIGEAHGGRNRSGPTHMTVCRLPYGPTAYFRLTSIVPS 244
Query: 217 KDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFF 276
K I H PT H PELVL+NF+T LG +G L+QS+FP P+ GR+VV+ NQRDFIFF
Sbjct: 245 KAIPGHAKPTSHSPELVLSNFSTPLGLSIGTLLQSVFPALPQLEGRQVVSVQNQRDFIFF 304
Query: 277 RHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSE 336
R YM F E ++
Sbjct: 305 RR---------FRYM--------------FAEREKMFL---------------------- 319
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTF 366
K ++K+ RLQE GPRFTLK+ L+ GT
Sbjct: 320 KEGEEKIRARLQEIGPRFTLKIRWLKRGTL 349
>gi|395328924|gb|EJF61314.1| Brix-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 312
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 94/153 (61%), Gaps = 3/153 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI++TT R S++ F E+ V PNSH RG Y +K++ E + D T ++++H +
Sbjct: 82 PKIVVTTSRDPSSKLLQFAKEMRLVFPNSHRINRGNYVVKELAEACRTNDVTDLVILHEH 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 246
R PDA+++ P GPT +F L + LR DI ++ + T P L+ NF+++LG R+
Sbjct: 142 RGVPDAMIVSHFPHGPTVYFTLHNVQLRHDIASYKSSTVSEQYPHLIFENFSSKLGERIR 201
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ LFP P+ +RV+TF N+ DFI FRHH
Sbjct: 202 DVLKYLFP-VPKEDSKRVMTFSNEDDFISFRHH 233
>gi|195388596|ref|XP_002052965.1| GJ23618 [Drosophila virilis]
gi|194151051|gb|EDW66485.1| GJ23618 [Drosophila virilis]
Length = 297
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 121/261 (46%), Gaps = 60/261 (22%)
Query: 126 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 184
GC PKI++TT S+R F+ EL + PN+ RG Y L +++ + + T I+
Sbjct: 78 GCQDPKIMLTTSHEPSSRLKIFMKELRLIFPNAQQMNRGKYQLNTLMQACRANNVTDFII 137
Query: 185 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 244
VH +R PD+L+I LP GPTA F ++ + +R DI + G + P L+ +NF + +G R
Sbjct: 138 VHEHRGIPDSLVICHLPFGPTAFFNITDVTMRHDIPDIGTMSEQKPHLIFSNFKSNIGLR 197
Query: 245 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMK 304
+++ LFP P+ + R+++F N D I FRHH
Sbjct: 198 TVNILKHLFP-VPKEKSERIISFINNEDKISFRHH------------------------- 231
Query: 305 AFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 364
+Y + KE K L E GPRF LKL ++ G
Sbjct: 232 -------QYKYINKEIK-------------------------LTEIGPRFQLKLYQIKLG 259
Query: 365 TF-DTKGGEFEWVHKPEMDTS 384
T + K + EWV +P ++T+
Sbjct: 260 TLENIKAVDTEWVSRPYLNTT 280
>gi|256078860|ref|XP_002575711.1| U3 small nucleolar ribonucleoprotein protein imp4 [Schistosoma
mansoni]
gi|350644510|emb|CCD60745.1| U3 small nucleolar ribonucleoprotein protein imp4, putative
[Schistosoma mansoni]
Length = 277
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 113/198 (57%), Gaps = 7/198 (3%)
Query: 61 EKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFS 120
E+ +K K R K+ E G PA + P+T+E+ R DET+ DD+E+ ++ DEFS
Sbjct: 19 ERIQKAKERRIKRKQRKESGA--PAGI-PQTLESLRTVDETIVPKDDEEVVIEHETDEFS 75
Query: 121 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 180
SI PKIL+T R F EL VIPN R LKKII A ++ FT
Sbjct: 76 SIFNGEITPKILLTHSDRVCPRTIGFCKELSMVIPNVQLVARWHLPLKKIIPMAIERQFT 135
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN----PTGHIPELVLNN 236
+I+V+ ++++ + L++ LP+GPTA F+L+ ++LR+++++ + IP L+
Sbjct: 136 CLIIVNEDQKKINTLVVSHLPNGPTATFRLTNVLLRREMRSAKKVKYIESNVIPHLITTR 195
Query: 237 FATRLGHRVGRLIQSLFP 254
F TRLG R R++ SLFP
Sbjct: 196 FMTRLGLRTERILSSLFP 213
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 390
+ E GP+FTLKL S+Q GTFD++ G +EWV K E+ SRR F L
Sbjct: 233 MNEVGPKFTLKLRSIQLGTFDSQYGNYEWVRKRTEIGKSRRTFVL 277
>gi|389747395|gb|EIM88574.1| Brix-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 315
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 92/153 (60%), Gaps = 3/153 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI++TT R S++ F E+ V PNSH RG Y +K++ E + + T +IV+H +
Sbjct: 82 PKIVVTTSRDPSSKLLQFSKEMRLVFPNSHRINRGNYVVKELAEACRANEVTDLIVLHEH 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 246
R PDA+++ P GPT +F L + LR DI N+ + T P L+ NF+++LG R+
Sbjct: 142 RGVPDAMIVSHFPHGPTVYFTLHNVNLRHDIPNYNSSTVSEQYPHLIFENFSSKLGERMR 201
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +R++TF N DFI FRHH
Sbjct: 202 DCLKYLFP-VPKEDSKRIMTFSNDNDFISFRHH 233
>gi|395542208|ref|XP_003773026.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Sarcophilus harrisii]
Length = 290
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 124/243 (51%), Gaps = 28/243 (11%)
Query: 46 KRSAVHAKLKHQKK---VEKRKKLKARDAAEKRALELGEEPPARMT--PRTIENTREPD- 99
+R ++ K + QK+ EK+++LK RALE + P + T++ E D
Sbjct: 9 RREYLYRKAQEQKQHLLEEKKRRLK-------RALEDNQPIPPELCREALTLQQALEFDD 61
Query: 100 ---ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPN 156
E V P DDE D P+I+ITT R S+R F EL ++P
Sbjct: 62 VGSEDVLNPQDDEYRWAGVED-----------PRIMITTSRDPSSRLKMFAKELKLILPG 110
Query: 157 SHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLR 216
+ RG ++ ++ + + T +++VH +R P L++ LP GPTA+F L +V+R
Sbjct: 111 AQKMNRGRCEMGALVRACEARGVTDLLLVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMR 170
Query: 217 KDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFF 276
DI G + P L+ + F++ LG RV +++SLFP P+ RV+TF NQ D+I F
Sbjct: 171 HDIPGLGTASEAFPHLIFSGFSSHLGQRVSSILRSLFP-VPKDDSHRVITFVNQDDYISF 229
Query: 277 RHH 279
RHH
Sbjct: 230 RHH 232
>gi|115498000|ref|NP_001069085.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Bos taurus]
gi|122064257|sp|Q0VD01.1|IMP4_BOVIN RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4
gi|111304621|gb|AAI19910.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Bos
taurus]
gi|296490786|tpg|DAA32899.1| TPA: U3 small nucleolar ribonucleoprotein protein IMP4 [Bos taurus]
Length = 291
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+++ F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTASEAKPHLIMHGFSSRLGKRVSDI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RRV+TF NQ D+I FRHH
Sbjct: 203 LRYLFP-VPKDDSRRVITFANQDDYISFRHH 232
>gi|393215490|gb|EJD00981.1| Brix-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 288
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 93/156 (59%), Gaps = 3/156 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S++ F E+ V PNSH RG Y ++++ E + + T +IV+H +
Sbjct: 82 PKIVITTSRDPSSKLLQFAKEIRLVFPNSHRINRGNYVVRELAEACRANEVTDLIVLHEH 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 246
R PDA+++ P GPT + L + LR DI ++ + T P L+ NF+ +LG RV
Sbjct: 142 RGVPDAMIVSHFPHGPTLYLSLHNVQLRHDIASYSSSTVSEQYPHLIFENFSLQLGERVR 201
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
+++ LFP P+ +RV+TF NQ DFI FRHH V
Sbjct: 202 DILKYLFP-VPKEDSKRVMTFANQNDFISFRHHVFV 236
>gi|344229341|gb|EGV61227.1| Brix-domain-containing protein [Candida tenuis ATCC 10573]
gi|344229342|gb|EGV61228.1| hypothetical protein CANTEDRAFT_116753 [Candida tenuis ATCC 10573]
Length = 283
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 156/354 (44%), Gaps = 80/354 (22%)
Query: 42 KNKEKRSAVH---AKLKHQKKVEKRKKLKARDAAEK-RALELGEEPPARMTPRTIENTRE 97
+ +E+R ++ A+L+ K EKR++LKA A+ K + ELGE+ + + +
Sbjct: 5 QTRERREYLYRKAAELQDAKLTEKRQQLKAALASGKPLSKELGEDQDLQK-----DFVYD 59
Query: 98 PDETVCRPDDDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPN 156
E V N DE++S G A P+I++TT R S + F E+ + PN
Sbjct: 60 QSEQV-----------NVDDEYAST--SGIADPRIIVTTSRNPSVKLSQFSKEIKLMFPN 106
Query: 157 SHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLR 216
S RG Y + ++IE +K +IV+H +R P ++ I P GP+ F L + LR
Sbjct: 107 SIKLNRGNYIIPELIESCQKSGMNDMIVLHEHRGVPTSITINHFPHGPSCIFTLHNVKLR 166
Query: 217 KDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFF 276
D+ GN + P L+ F+++LG RV ++++ LFP + RV+TF N+ D+I
Sbjct: 167 HDLPEMGNVSESYPHLIFEGFSSKLGERVVQVLKHLFPPGEKKSSSRVITFVNKNDYISV 226
Query: 277 RHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSE 336
RHH V K KD+
Sbjct: 227 RHHIFV----------------------------------------------KTKDS--- 237
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L E GPRF +KL ++ G D K E EW K + T+ R+ +L
Sbjct: 238 --------VELSEIGPRFEMKLFEMRLGNMDNKESEVEWQLKRFIRTANRKNYL 283
>gi|296005227|ref|XP_002808945.1| nucleolar preribosomal assembly protein, putative [Plasmodium
falciparum 3D7]
gi|225631831|emb|CAX64226.1| nucleolar preribosomal assembly protein, putative [Plasmodium
falciparum 3D7]
Length = 328
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 128/246 (52%), Gaps = 7/246 (2%)
Query: 37 LPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTR 96
L +KNK +++A+ K + KK+ RK+ K + K+AL + P + P+TIE
Sbjct: 34 LSRFVKNKNRKNALKGK-AYIKKLVLRKQ-KKEEIRNKKALNI---PVEKKLPKTIERLS 88
Query: 97 EPDET-VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIP 155
D+ + ++ L N DEFS K P I+IT+ + S F+ EL P
Sbjct: 89 IFDDNKISLENEKFLLNENCIDEFSDYFKNQKEPNIIITSIKRPSKNTILFMKELSLTFP 148
Query: 156 NSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN-RREPDALLIIGLPDGPTAHFKLSKLV 214
+ Y R ++ ++ + + F++ I++ P + I LP+GPTA + LS +
Sbjct: 149 HIFYEPRLDNSIEYLLNNSIQNQFSTFILIEEGIDHHPKNMFICTLPNGPTAKYSLSNIF 208
Query: 215 LRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFI 274
K++ T PE+ + NF T +G R+ R + +L P PE++ ++VV F+NQRDFI
Sbjct: 209 YAHKQKSNIEITTLAPEVYITNFNTFIGERIKRQLHTLVPFKPEYKSQKVVVFYNQRDFI 268
Query: 275 FFRHHR 280
FFRH++
Sbjct: 269 FFRHYK 274
>gi|195446437|ref|XP_002070780.1| GK12239 [Drosophila willistoni]
gi|194166865|gb|EDW81766.1| GK12239 [Drosophila willistoni]
Length = 306
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 91/156 (58%), Gaps = 2/156 (1%)
Query: 126 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 184
GC PKI++TT S+R F+ EL + PN+ RG Y L ++ + + T I+
Sbjct: 77 GCEDPKIMLTTSHDPSSRLKIFMKELRLIFPNAQQMNRGKYKLSTLMHACRANNVTDFII 136
Query: 185 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 244
VH +R PD L++ LP GPTA F +S +V+R DI + G + P L+ NNF + +G R
Sbjct: 137 VHEHRGVPDGLVVCHLPYGPTAFFNISDVVMRHDIPDIGKMSEQKPHLIFNNFKSTIGLR 196
Query: 245 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHR 280
++++ LFP P+ +RV+TF N D I FRHH+
Sbjct: 197 TVQILKHLFP-VPKENSQRVITFLNHNDSIIFRHHQ 231
>gi|219121362|ref|XP_002185906.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582755|gb|ACI65376.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 296
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P+I +TT R S+R F E+ + PNS RG + +++E ++ +F+ +++V
Sbjct: 91 PRICVTTSRSPSSRLKQFAKEIKLLFPNSTRINRGNNRVDELMESCRQSEFSDVVIVQET 150
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI-PELVLNNFATRLGHRVGR 247
R EPD L+I LP GPTA F LS V+R D+ P P ++LN F + LG R G
Sbjct: 151 RGEPDGLVICHLPLGPTAFFSLSNAVMRHDLNPPAAPMSEAYPHILLNGFNSELGKRAGN 210
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ LFP P +RVVTF N+ DFI FRHH
Sbjct: 211 ILKCLFP-VPRADSKRVVTFSNENDFISFRHH 241
>gi|392568093|gb|EIW61267.1| Brix-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 316
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 93/153 (60%), Gaps = 3/153 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI++TT R S++ F E+ V PNSH RG Y +K++ E + D + ++V+H +
Sbjct: 82 PKIVVTTSRDPSSKLIQFAKEMRLVFPNSHRINRGNYVVKELAEACRANDVSDLVVLHEH 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 246
R PDA+++ P GPT +F L + LR DI ++ + T P L+ NF+++LG R+
Sbjct: 142 RGVPDAMIVSHFPHGPTVYFTLHNVQLRHDIASYKSSTVSEQYPHLIFENFSSKLGERIQ 201
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ LFP P+ +RV+TF + DFI FRHH
Sbjct: 202 DVLKYLFP-VPKEDSKRVMTFSTEDDFISFRHH 233
>gi|328856726|gb|EGG05846.1| hypothetical protein MELLADRAFT_63883 [Melampsora larici-populina
98AG31]
Length = 288
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 90/156 (57%), Gaps = 3/156 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKILITT R S++ F E+ + PN+H RGTY + +I + T +++VH +
Sbjct: 82 PKILITTSRNPSSKLLQFSKEMRLIFPNAHRVNRGTYVMGEIAAACRANAITDLLIVHEH 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 246
R PDAL++ P GPT F L +VLR D+ + T P LV + F T+LG R+
Sbjct: 142 RGIPDALVVSHFPHGPTVLFTLHNVVLRHDVPSGSTSTVSEQYPHLVFDGFGTKLGSRIM 201
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
+++ LFP P+ +RV+TF NQ DFI FRHH V
Sbjct: 202 SVLKYLFP-VPKEESKRVMTFSNQADFISFRHHVFV 236
>gi|350593294|ref|XP_003133355.3| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Sus scrofa]
Length = 408
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 200 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 259
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+++ F++RLG RV +
Sbjct: 260 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTASEAKPHLIMHGFSSRLGKRVSDI 319
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RRV+TF NQ D+I FRHH
Sbjct: 320 LRYLFP-VPKDDSRRVITFANQDDYISFRHH 349
>gi|356605798|gb|AET24958.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 20 KK-2011]
Length = 189
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F E+ + PNS RG YD+K++++ + +D T +I++
Sbjct: 2 PKIVITTSRDPSSRLKMFSKEMKLIFPNSQRINRGHYDVKQVVQACRAQDTTDLIILTET 61
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD +++ LP GPTA F +S +V+R DI N G + P L+ N ++LG R +
Sbjct: 62 RGNPDGMIVCHLPFGPTAFFSMSNVVMRHDIPNCGTMSEQYPHLIFNKLDSKLGIRFTTI 121
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ +RV+TF N D+I +RHH
Sbjct: 122 LKHLFP-VPKPDSKRVMTFANTDDYISYRHH 151
>gi|395546312|ref|XP_003775033.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Sarcophilus harrisii]
Length = 346
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P+I+ITT R S+R F EL + P + RG +++ ++ K T +++VH +
Sbjct: 139 PRIMITTSRDPSSRLKMFAKELKLIFPGAQKMNRGRHEMGALVRACKANGVTDLLLVHEH 198
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R D+ + G P L+ + F++RLG RV +
Sbjct: 199 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDVPDLGTAPQAFPHLIFHGFSSRLGQRVSDI 258
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RRV+TF NQ DFI FRHH
Sbjct: 259 LRYLFP-VPKDESRRVITFANQDDFISFRHH 288
>gi|363753486|ref|XP_003646959.1| hypothetical protein Ecym_5387 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890595|gb|AET40142.1| hypothetical protein Ecym_5387 [Eremothecium cymbalariae
DBVPG#7215]
Length = 283
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 100/184 (54%), Gaps = 10/184 (5%)
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DETV DDE A S I+ PK+L+TT R S + F E+ + P S
Sbjct: 59 DETVQDSIDDEYSAT------SGIVD----PKLLVTTSRDPSTKLSQFAKEVKLLFPTSV 108
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
RG + + +++ +K T ++V+H +R P +L I P GPTA F L +VLR D
Sbjct: 109 RLNRGNFVMNNLVDACQKSGTTDLVVLHEHRGVPTSLTISHFPHGPTAFFTLHNVVLRHD 168
Query: 219 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
I N GN + P L+ +NF T LG RV +++++LFP SP+ RV+TF N+ DFI R
Sbjct: 169 ILNAGNQSEVNPHLIFDNFTTPLGKRVVKILKNLFPASPKKDSARVITFANRGDFISVRQ 228
Query: 279 HRCV 282
H V
Sbjct: 229 HVYV 232
>gi|335308224|ref|XP_003361145.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Sus scrofa]
Length = 256
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 48 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 107
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+++ F++RLG RV +
Sbjct: 108 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTASEAKPHLIMHGFSSRLGKRVSDI 167
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RRV+TF NQ D+I FRHH
Sbjct: 168 LRYLFP-VPKDDSRRVITFANQDDYISFRHH 197
>gi|363814284|ref|NP_001242782.1| uncharacterized protein LOC100803810 [Glycine max]
gi|255639830|gb|ACU20208.1| unknown [Glycine max]
Length = 293
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 121/238 (50%), Gaps = 32/238 (13%)
Query: 45 EKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCR 104
EK+ + L+ K + +L+ +AA +R ++L +E NT P +
Sbjct: 27 EKKRKIREALQEGKPIPT--ELRNEEAALRREIDLEDE-----------NTAVPRTHI-- 71
Query: 105 PDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 164
DDE + D PKIL+TT R S F+ EL PN+ RG
Sbjct: 72 --DDEYAYAAEKD-----------PKILLTTSRDPSAPLQQFVKELSFEFPNAQRMNRGG 118
Query: 165 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH-- 222
+ +IIE + D+T +++VH +R PD L++ LP GPTA+F L +V R +IK
Sbjct: 119 QVISEIIESCRAHDYTDVVLVHEHRGVPDGLIVCHLPFGPTAYFGLLNVVTRHEIKGKKA 178
Query: 223 -GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
G P L+L+NF+T+LG R +++ LFP P+ +R+VTF NQ D+I FRHH
Sbjct: 179 IGTMPEAYPHLILDNFSTKLGDRTANILKHLFP-VPKPDTKRIVTFSNQSDYISFRHH 235
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L+E GPRF L+L ++ GT D + EW +P M+T+++R FL
Sbjct: 248 LKEIGPRFELRLYQIKLGTVDQAEAQIEWAIRPYMNTTKKRKFL 291
>gi|356605816|gb|AET24967.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 8 KK-2011]
Length = 182
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 90/148 (60%), Gaps = 1/148 (0%)
Query: 132 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 191
+ITT R S+R F E+ V PNS RG YD+K++++ + +D T +IV+ R +
Sbjct: 2 VITTSRDPSSRLKMFSKEMRLVFPNSQRINRGHYDVKQLVQACRAQDTTDLIVLTETRGQ 61
Query: 192 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 251
PD L++ LP GPTA F ++ +V+R DI N G + P L+ N ++LGHR +++
Sbjct: 62 PDGLIVCHLPFGPTAFFSMANVVMRHDIPNCGTMSEQYPHLIFNKLDSKLGHRFTSILKH 121
Query: 252 LFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
LFP P+ +RV+TF N D+I +RHH
Sbjct: 122 LFP-VPKSDSKRVMTFANTDDYISYRHH 148
>gi|401623864|gb|EJS41945.1| imp4p [Saccharomyces arboricola H-6]
Length = 290
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 126/243 (51%), Gaps = 14/243 (5%)
Query: 44 KEKRSAVHAKLK--HQKKVEKRKKLKARDAAEKRAL--ELGEEPPARMTPRTIENTREPD 99
+E+R ++ K + ++++++++ + A+ + L EL E+ + R ++ +E +
Sbjct: 7 RERREYLYRKAQELQDSQLQQKRQIVKQALAQGKPLPKELAEDEDLQKDFRYDQSLKEGE 66
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
ET DDE A + + P+I++TT R S R F E+ + PN+
Sbjct: 67 ETDDLQVDDEYAATSGITD----------PRIIVTTSRDPSTRLSQFAKEIKLLFPNAVR 116
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
RG Y + +++ KK T +IV+H +R P +L I P GPTA F L +V+R DI
Sbjct: 117 LNRGNYVMPNLVDACKKSGTTDLIVLHEHRGVPTSLTISHFPHGPTAQFSLHNVVMRHDI 176
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
N GN + P L+ +NF T LG RV +++ LF P+ RV+TF N+ DFI R H
Sbjct: 177 INGGNQSEVNPHLIFDNFTTDLGKRVACILKHLFNAGPKKDSERVITFANRGDFISVRQH 236
Query: 280 RCV 282
V
Sbjct: 237 VYV 239
>gi|242080607|ref|XP_002445072.1| hypothetical protein SORBIDRAFT_07g003670 [Sorghum bicolor]
gi|241941422|gb|EES14567.1| hypothetical protein SORBIDRAFT_07g003670 [Sorghum bicolor]
Length = 293
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 59/262 (22%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKIL TT R S F+ EL V P S RG + +I+E + + T +I+VH +
Sbjct: 83 PKILFTTSRNPSAPLTQFVKELKVVFPMSQRMNRGGQVISEIVESCRSHNITDLILVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI---KNHGNPTGHIPELVLNNFATRLGHRV 245
R +PD L++ LP+GPTA+F L +V R DI K G + P LVL+NF+T++G R
Sbjct: 143 RGQPDGLIVSHLPNGPTAYFGLLNVVTRHDIRGRKAMGKMSEAYPHLVLDNFSTQVGERT 202
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKA 305
+++ LF P+ +R++TF N+ ++I FRHH
Sbjct: 203 ATILKHLF-LMPKPDSKRIITFANRDEYISFRHH-------------------------- 235
Query: 306 FCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT 365
++E GS L+E GPRF L+L ++ G
Sbjct: 236 --------VYEKSGGPGS---------------------MELKEVGPRFELRLYQIKLGA 266
Query: 366 FDTKGGEFEWVHKPEMDTSRRR 387
+ + E+V +P ++T++++
Sbjct: 267 VEQNEAQSEFVLRPYINTAKKQ 288
>gi|145548718|ref|XP_001460039.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427867|emb|CAK92642.1| unnamed protein product [Paramecium tetraurelia]
Length = 287
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 92/152 (60%), Gaps = 2/152 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P+I++TT R S R + E+ + PN RG +K ++ + ++K+F+ +I+VH +
Sbjct: 83 PQIVLTTSRSPSQRLITLMKEMGLIFPNCTRVNRGALVVKDLVIHCQQKNFSDLIIVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG-HIPELVLNNFATRLGHRVGR 247
R EPD L+I +P GPT +F + VLR D+ +P P L+ +NF+T+LG RV
Sbjct: 143 RGEPDGLIISHMPLGPTIYFGVKNAVLRHDLDVRADPLSEQYPHLIFDNFSTKLGERVTT 202
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ LFP P+ +RV+TFHN+ I FRHH
Sbjct: 203 ILKHLFP-VPKIDSKRVLTFHNENGVISFRHH 233
>gi|302308389|ref|NP_985285.2| AER430Wp [Ashbya gossypii ATCC 10895]
gi|442570176|sp|Q755T8.2|IMP4_ASHGO RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4
gi|299789432|gb|AAS53109.2| AER430Wp [Ashbya gossypii ATCC 10895]
gi|374108511|gb|AEY97418.1| FAER430Wp [Ashbya gossypii FDAG1]
Length = 283
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 107/210 (50%), Gaps = 11/210 (5%)
Query: 74 KRALELGEEPPARMTPRT-IENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKIL 132
K+AL G+ P + T ++ + DE+ DDE S L PK++
Sbjct: 33 KQALAQGKPLPKEVADDTKLQRDYQYDESAQESIDDEY----------SALSGIVDPKVI 82
Query: 133 ITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREP 192
+TT R S R F E+ + P S RG Y +K +++ +K T ++V+H +R P
Sbjct: 83 VTTSRDPSTRLSQFAKEVKLLFPTSVRLNRGNYIMKNLVDACQKSGTTDLVVLHEHRGVP 142
Query: 193 DALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSL 252
AL I P GPTA F L +VLR DI N GN + P L+ +NF T LG RV ++++ +
Sbjct: 143 TALTISHFPHGPTASFSLHNVVLRHDILNAGNQSEVHPHLIFDNFTTPLGQRVVKILKHM 202
Query: 253 FPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
FP + RV+TF N+ DFI R H V
Sbjct: 203 FPPGVKKDSPRVITFANRGDFISVRQHVYV 232
>gi|50291449|ref|XP_448157.1| hypothetical protein [Candida glabrata CBS 138]
gi|73621058|sp|Q6FNN7.1|IMP4_CANGA RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4
gi|49527468|emb|CAG61108.1| unnamed protein product [Candida glabrata]
Length = 288
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 100/177 (56%), Gaps = 4/177 (2%)
Query: 107 DDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTY 165
D+E AG D DE+S+ G ++++TT R S+R F E+ + PN+ RG Y
Sbjct: 64 DNEDEAGVD-DEYSA--SSGIVEARVIVTTSRDPSSRLAQFAKEIKLLFPNAVRLNRGNY 120
Query: 166 DLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP 225
+ ++ KK T +IV+H +R P +L + P GPTA F L +VLR DI N GN
Sbjct: 121 VMADLVSACKKSGTTDLIVLHEHRGVPTSLTVSHFPYGPTAFFSLHNVVLRHDILNRGNQ 180
Query: 226 TGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
+ P L+ +NF T LG+RV ++++LFP P+ RV+TF N+ DFI R H V
Sbjct: 181 SEVNPHLIFDNFTTPLGNRVVTILKNLFPPGPKKDSSRVITFANRGDFISVRQHVYV 237
>gi|356605802|gb|AET24960.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 16 KK-2011]
Length = 182
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
Query: 132 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 191
+ITT R S+R F E+ + PNS RG YD+K++++ +K +D T +I+ R
Sbjct: 1 VITTSRDPSSRLKMFAKEMKLIFPNSQRINRGHYDVKQVVQASKAQDSTDLIIFTETRGN 60
Query: 192 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 251
PD +L+ LP GPTA F ++ +V+R DI N G + P L+ +N ++LG R +++
Sbjct: 61 PDGMLVCHLPFGPTAFFSMANVVMRHDIPNCGTMSEQYPHLIFDNLNSKLGQRFTTILKH 120
Query: 252 LFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
LFP P+ +R++TF N DF+ FRHH
Sbjct: 121 LFP-VPKPDSKRIITFSNTDDFLSFRHH 147
>gi|440911983|gb|ELR61596.1| U3 small nucleolar ribonucleoprotein IMP4, partial [Bos grunniens
mutus]
Length = 291
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 90/151 (59%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+++ F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTASEAKPHLIMHGFSSRLGKRVSDI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 232
>gi|342181505|emb|CCC90984.1| putative U3 small nuclear ribonucleoprotein (snRNP) [Trypanosoma
congolense IL3000]
Length = 287
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 102/177 (57%), Gaps = 7/177 (3%)
Query: 106 DDDEL--FAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKR 162
DDD+ DE++ K G P++L+TT R S + F E+ V+PN+ R
Sbjct: 60 DDDQTKSLVTTVDDEYA---KAGVEDPRVLVTTSREPSQKLLEFAKEVRLVVPNAVRMNR 116
Query: 163 GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH 222
G ++++++E A++ F+ ++V+ ++ PD+L + LP GPT F + LV R DI++
Sbjct: 117 GGLNIRQLMEAARRDQFSDVVVLQESKGVPDSLTVSHLPLGPTVVFTIHNLVTRHDIEDV 176
Query: 223 GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
G + P L+ NF T+LG R+ +++ LFP P+ RV+TF NQ DFI FRHH
Sbjct: 177 GTMSEQYPHLIFENFTTKLGCRIRDVLKYLFP-VPKPESTRVLTFDNQNDFISFRHH 232
>gi|11596252|gb|AAG38541.1|AF309805_6 coiled-coil protein [Pneumocystis carinii]
Length = 277
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 91/198 (45%), Gaps = 56/198 (28%)
Query: 193 DALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSL 252
D+L+II LP GP+ +F +S + I HG T HIPEL++NNF T LG V + +SL
Sbjct: 135 DSLIIIHLPSGPSFYFTISSITPTSCIYRHGRATSHIPELIINNFTTYLGLTVENMFRSL 194
Query: 253 FPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECR 312
FP +F GR+VVT HNQRDFIF R HR
Sbjct: 195 FPTQADFEGRQVVTIHNQRDFIFIRRHR-------------------------------- 222
Query: 313 YIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE 372
YIF + + LQE GPRFTLKL LQ G D
Sbjct: 223 YIF------------------------KNDIKVSLQELGPRFTLKLRRLQRGIHDRHADN 258
Query: 373 FEWVHKPEMDTSRRRFFL 390
+ +KP +++R RF+L
Sbjct: 259 VVYEYKPGEESNRTRFWL 276
>gi|301791726|ref|XP_002930830.1| PREDICTED: u3 small nucleolar ribonucleoprotein protein IMP4-like
[Ailuropoda melanoleuca]
Length = 291
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 90/151 (59%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+++ F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTVSEAKPHLIMHGFSSRLGKRVSDI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 232
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
KT+ + V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 236 KTNHRSV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|403218562|emb|CCK73052.1| hypothetical protein KNAG_0M01990 [Kazachstania naganishii CBS
8797]
Length = 286
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 140/334 (41%), Gaps = 68/334 (20%)
Query: 62 KRKKLKARDAAEKR-----ALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDA 116
K ++L+ AEKR ALE G+ P + E T+ ++ R D A +
Sbjct: 16 KAQQLQEAQLAEKRQVIKQALEQGKPLPRELA----EETQLQED--YRYDQSTNLAEEEI 69
Query: 117 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
D+ S P+I++TT R S R F E+ + P + RG + ++ K
Sbjct: 70 DDEYSHTSGVADPRIVVTTSRDASTRLLQFAKEIKLMFPQATRLNRGNIIISNLVGACIK 129
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 236
+ +IV+H +R P +L I P GPTA F L +VLR DI N GN + P L+ +
Sbjct: 130 SGTSDLIVLHEHRGVPTSLTISHFPHGPTASFSLHNVVLRHDILNRGNVSEMNPHLIFDG 189
Query: 237 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILC 296
F T+LG RV +++ LF + +RV+TF N+ DFI R H V
Sbjct: 190 FTTKLGERVVSILKHLFAPGTKPTSQRVITFANRGDFISVRQHVYV-------------- 235
Query: 297 SYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 356
K KD+ L E GPRF +
Sbjct: 236 --------------------------------KTKDS-----------VELAEVGPRFEM 252
Query: 357 KLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
KL L+ GT D K + EW K + T+ R+ +L
Sbjct: 253 KLYELRLGTMDNKDADVEWQLKRFVRTANRKDYL 286
>gi|255721277|ref|XP_002545573.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Candida
tropicalis MYA-3404]
gi|240136062|gb|EER35615.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Candida
tropicalis MYA-3404]
Length = 286
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 152/351 (43%), Gaps = 75/351 (21%)
Query: 44 KEKRSAVHAK---LKHQKKVEKRKKLKARDAAEK-RALELGEEPPARMTPRTIENTREPD 99
+E+R ++ K L+ EKR++LKA A+ K + EL E+ ++ D
Sbjct: 7 RERREYLYRKALQLQEASLTEKRQQLKAALASGKPLSKELAED-------EKLQKDFIYD 59
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
E+V D+ L + D+ S L PK+LITT R S + F E+ + PNS
Sbjct: 60 ESV---QDNNL----EIDDEYSALSGISDPKVLITTSRDPSVKLLQFSKEIKLMFPNSLK 112
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
RG Y + ++ + + +I++H +R P +L + P GPTA F L + LR D+
Sbjct: 113 LNRGNYIMSDLVSTCSRVQISDMILLHEHRGVPSSLTVSHFPHGPTAIFTLHNVKLRHDL 172
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
N GN + P L+ NF T LG RV +++Q LFP + RV+TF N D+I RHH
Sbjct: 173 PNLGNVSESYPHLIFENFNTPLGKRVVKILQHLFPPGVKKDSSRVITFVNNDDYISVRHH 232
Query: 280 RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS 339
V KAKD+
Sbjct: 233 VYV----------------------------------------------KAKDS------ 240
Query: 340 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ E GPRF ++L ++ G D K + EW + + T+ R+ +L
Sbjct: 241 -----VEISEVGPRFEMRLYEIRLGLPDNKDADVEWQLRRFIRTANRKNYL 286
>gi|146420716|ref|XP_001486312.1| hypothetical protein PGUG_01983 [Meyerozyma guilliermondii ATCC
6260]
gi|146389727|gb|EDK37885.1| hypothetical protein PGUG_01983 [Meyerozyma guilliermondii ATCC
6260]
Length = 302
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Query: 108 DELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD 166
DE N DE+S++ G A PK+++TT R S + F E+ P S RG Y
Sbjct: 78 DESEQVNVDDEYSAL--SGIAEPKVIVTTSRSPSVKLLQFAKEMKLFFPQSVKLNRGNYI 135
Query: 167 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT 226
+ +++E KK + T ++V+H +R P +L I P GPTA F L + LR D+ N GN +
Sbjct: 136 VPELVESCKKVNMTDMVVLHEHRGVPTSLTISHFPHGPTAMFSLHNVKLRHDLPNLGNIS 195
Query: 227 GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
P L+ NF T LG RV ++++ LFP + RV+TF N DFI RHH V
Sbjct: 196 EAYPHLIFENFTTPLGQRVVQILKHLFPPGAKKDSSRVITFVNNDDFITVRHHVYV 251
>gi|417409636|gb|JAA51316.1| Putative u3 small nucleolar ribonucleoprotein snornp component,
partial [Desmodus rotundus]
Length = 315
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 107 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 166
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI N G + P L+++ ++RLG RV +
Sbjct: 167 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPNLGTMSEAKPHLIMHGLSSRLGKRVSDI 226
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 227 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 256
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
KTS + V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 260 KTSHRDV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 312
>gi|255718277|ref|XP_002555419.1| KLTH0G08866p [Lachancea thermotolerans]
gi|238936803|emb|CAR24982.1| KLTH0G08866p [Lachancea thermotolerans CBS 6340]
Length = 283
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 95/167 (56%), Gaps = 3/167 (1%)
Query: 117 DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 175
DE+S+ G A PK+++TT R S R F E+ + P++ RG Y + +++ K
Sbjct: 68 DEYSAT--SGLAEPKVIVTTSRDPSTRLSQFAKEIRLLFPSAVRLNRGNYIMPNLVDACK 125
Query: 176 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLN 235
K + ++V+H +R P +L I P GPTA+F L +VLR DI N GN + P L+ +
Sbjct: 126 KSGTSDLVVLHEHRGVPTSLTISHFPHGPTAYFTLHNVVLRHDILNAGNQSEVNPHLIFD 185
Query: 236 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
NF T LG RV +++ +FP P+ RV+TF N+ DFI R H V
Sbjct: 186 NFTTPLGQRVVTILKHIFPPGPKKDSPRVITFANRGDFISVRQHVYV 232
>gi|405120614|gb|AFR95384.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. grubii H99]
Length = 288
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F EL V PNS+ RG +K ++ + T ++VVH +
Sbjct: 83 PKIVITTSRSPSSRLLQFSKELRLVFPNSYRLNRGNTVIKDLVSACNAQGVTDLVVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLNNFATRLGHRVGR 247
R PDAL++ LP GPT L + LR D+ N + P L+ + F+T+LG RV
Sbjct: 143 RGVPDALIVSHLPHGPTLSMTLHNVTLRHDVSSNSSTVSEQYPHLIFDGFSTKLGERVTG 202
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++++LFP P+ +RV+TF N+ DFI FRHH
Sbjct: 203 ILKALFP-VPKDDAKRVMTFKNENDFISFRHH 233
>gi|349501006|ref|NP_001231768.1| ribosome production factor 1 isoform 2 [Danio rerio]
Length = 249
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 89/144 (61%)
Query: 79 LGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRF 138
LG++ P + P+TIEN R DET P+D+E+ DEFS+ + PK+LITT
Sbjct: 95 LGDKAPPKEVPKTIENQRIYDETTVNPEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDR 154
Query: 139 NSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLII 198
R F +L +VIP+++ Y R LKK+I + FT ++V++ +R+ P+ +++
Sbjct: 155 PRGRTVRFCDQLATVIPHAYVYYRRGLALKKVIPQCISRGFTYLMVINEDRKVPNGMVLC 214
Query: 199 GLPDGPTAHFKLSKLVLRKDIKNH 222
LPDGPTAHFK+S + LRK++K H
Sbjct: 215 HLPDGPTAHFKVSSVRLRKEMKRH 238
>gi|145485428|ref|XP_001428722.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395810|emb|CAK61324.1| unnamed protein product [Paramecium tetraurelia]
Length = 287
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 92/152 (60%), Gaps = 2/152 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P+I++TT R S R + E+ + PN RG +K ++ + ++K+++ +I+VH +
Sbjct: 83 PQIVLTTSRSPSQRLVTLMKEMGLIFPNCTRVNRGAQVVKDLVIHCQQKNYSDLIIVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG-HIPELVLNNFATRLGHRVGR 247
R EPD L+I +P GPT +F + VLR D+ +P P L+ +NF+T+LG RV
Sbjct: 143 RGEPDGLIISHMPLGPTIYFGVKNAVLRHDLDVKADPLSEQYPHLIFDNFSTKLGERVTT 202
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ LFP P+ +RV+TFHN+ I FRHH
Sbjct: 203 ILKHLFP-VPKIDSKRVLTFHNENGVIQFRHH 233
>gi|72390209|ref|XP_845399.1| U3 small nuclear ribonucleoprotein (snRNP) [Trypanosoma brucei
TREU927]
gi|62360569|gb|AAX80981.1| U3 small nuclear ribonucleoprotein (snRNP), putative [Trypanosoma
brucei]
gi|70801934|gb|AAZ11840.1| U3 small nuclear ribonucleoprotein (snRNP), putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|261328799|emb|CBH11777.1| U3 small nuclear ribonucleoprotein (snRNP),putative [Trypanosoma
brucei gambiense DAL972]
Length = 287
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 102/177 (57%), Gaps = 7/177 (3%)
Query: 106 DDDE--LFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKR 162
DDD+ + DE++ K G P +L+TT R S + F E+ +IPN+ R
Sbjct: 60 DDDQTKVLQTTVDDEYA---KAGVEDPHVLVTTSREPSQKLLEFAKEVRLIIPNAVRLNR 116
Query: 163 GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH 222
G ++++++E A++ ++ ++V+ ++ PD+L I LP GPT F + LV R DI++
Sbjct: 117 GNLNIRQLMEAARRDQYSDVVVLQESQGVPDSLTISHLPLGPTVVFTIHNLVTRHDIEDV 176
Query: 223 GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
G + P L+ NF T+LG R+ +++ LFP P+ RV+TF NQ DFI FRHH
Sbjct: 177 GTMSEQYPHLIFENFTTKLGCRIRDVLKYLFP-VPKPEATRVLTFDNQNDFISFRHH 232
>gi|58268148|ref|XP_571230.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. neoformans JEC21]
gi|57227464|gb|AAW43923.1| rRNA primary transcript binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 288
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F EL V PNS+ RG +K ++ + T ++VVH +
Sbjct: 83 PKIVITTSRSPSSRLLQFSKELRLVFPNSYRLNRGNTVVKDLVSACNAQGVTDLVVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLNNFATRLGHRVGR 247
R PDAL++ LP GPT L + LR D+ N + P L+ + F+T+LG RV
Sbjct: 143 RGVPDALIVSHLPHGPTLSMTLHNVTLRHDVSSNSSTVSEQYPHLIFDGFSTKLGERVTG 202
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++++LFP P+ +RV+TF N+ DFI FRHH
Sbjct: 203 ILKALFP-VPKDDAKRVMTFKNENDFISFRHH 233
>gi|134111703|ref|XP_775387.1| hypothetical protein CNBE1030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258046|gb|EAL20740.1| hypothetical protein CNBE1030 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 312
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F EL V PNS+ RG +K ++ + T ++VVH +
Sbjct: 107 PKIVITTSRSPSSRLLQFSKELRLVFPNSYRLNRGNTVVKDLVSACNAQGVTDLVVVHEH 166
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLNNFATRLGHRVGR 247
R PDAL++ LP GPT L + LR D+ N + P L+ + F+T+LG RV
Sbjct: 167 RGVPDALIVSHLPHGPTLSMTLHNVTLRHDVSSNSSTVSEQYPHLIFDGFSTKLGERVTG 226
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++++LFP P+ +RV+TF N+ DFI FRHH
Sbjct: 227 ILKALFP-VPKDDAKRVMTFKNENDFISFRHH 257
>gi|388852883|emb|CCF53568.1| probable IMP4-component of the U3 small nucleolar ribonucleoprotein
[Ustilago hordei]
Length = 290
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 157/355 (44%), Gaps = 81/355 (22%)
Query: 42 KNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDET 101
+ +E+R ++ K K+ K++ R + AL G+ P ++ T+E E+
Sbjct: 5 QTRERREYIYKKALESKE----KQIYERKQQIREALASGKP-----LPPSLAGTKEA-ES 54
Query: 102 VCRPDDDELFAGNDA------DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVI 154
+ R D L A DA DE+S + G P++L+TT R S+R F E+ +
Sbjct: 55 LGR--DLSLDAAQDAPGSSIDDEYS---RAGTYDPRVLVTTSRDPSSRLTQFAKEVRLLF 109
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
PNS RG Y + + A+ T ++V+H +R PDA+++ P GPT F L +V
Sbjct: 110 PNSTRLNRGGYTVSDLAAAARSNGITDMVVLHEHRGVPDAMVVSHFPHGPTLLFTLHNVV 169
Query: 215 LRKDIKNHGNPT--GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRD 272
LR ++ H N T P L+ N +RLG RV ++ LFP P+ +RV++F NQ D
Sbjct: 170 LRHEVSAHANSTVSEQYPHLIFENLNSRLGSRVMSALKFLFP-VPKDESKRVMSFVNQND 228
Query: 273 FIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKD 332
FIS +
Sbjct: 229 -------------FISFRHHVFI------------------------------------- 238
Query: 333 AKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 387
KTS ++V +L E GPRF ++ ++ GT D + EWV +P M+T+++R
Sbjct: 239 ----KTSHREV--QLAEVGPRFEARVYEIKQGTIDQGEADTEWVLRPYMNTAKKR 287
>gi|356605808|gb|AET24963.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 10 KK-2011]
Length = 178
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 1/148 (0%)
Query: 132 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 191
+ITT R S+R F E+ + PN+ RG YD+K++++ K +D T +I+ R
Sbjct: 1 VITTSRDPSSRLKMFSKEMKLIFPNAQRINRGHYDVKQVVQACKAQDSTDLIIFTETRGN 60
Query: 192 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 251
PD +L+ LP GPTA F ++ +V+R DI N G + P L+ +N ++LG R +++
Sbjct: 61 PDGMLVCHLPFGPTAFFSMANVVMRHDIPNCGTMSEQYPHLIFDNLNSKLGQRFTTILKH 120
Query: 252 LFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
LFP P+ +R++TF N DFI FRHH
Sbjct: 121 LFP-VPKPDSKRIITFSNSDDFISFRHH 147
>gi|345790694|ref|XP_534545.3| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Canis
lupus familiaris]
Length = 291
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKIMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P ++ LP GPTA+F L +V+R DI + G + P L+++ F++RLG RV +
Sbjct: 143 RGTPVGFIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLIMHGFSSRLGKRVSDI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 232
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
KT+ + V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 236 KTNHRNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|395849510|ref|XP_003797366.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4
[Otolemur garnettii]
Length = 321
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 113 PKIMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 172
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 173 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 232
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 233 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 262
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 274 LTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 318
>gi|334350400|ref|XP_001371477.2| PREDICTED: u3 small nucleolar ribonucleoprotein protein IMP4-like
[Monodelphis domestica]
Length = 359
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 113/225 (50%), Gaps = 18/225 (8%)
Query: 61 EKRKKLKARDAAEKRALELGEEPPARM------TPRTIENTREPDETVCRPDDDELFAGN 114
+K+ L+ + KRALE + P + R +E E V DDE
Sbjct: 89 QKQHLLEDKKQRLKRALEENQPIPTELRREALTLQRALEFDDAGGEGVLSHQDDEYRWAG 148
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
D P+I+ITT R S+R F EL + P + RG +++ +++
Sbjct: 149 VED-----------PRIMITTSRDPSSRLKMFAKELKLIFPGAQKMNRGRHEMGALVQAC 197
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVL 234
K T +++VH +R P L++ LP GPTA+F L +V+R D+ + G + P L+
Sbjct: 198 KANGVTDLLMVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDVPDLGTASEAFPHLIF 257
Query: 235 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+ F++RLG RV +++ LFP P+ RV+TF N+ D+I FRHH
Sbjct: 258 HGFSSRLGQRVSNILRYLFP-VPKDDSHRVITFANKDDYISFRHH 301
>gi|281349580|gb|EFB25164.1| hypothetical protein PANDA_021420 [Ailuropoda melanoleuca]
Length = 254
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 90/151 (59%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 46 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 105
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+++ F++RLG RV +
Sbjct: 106 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTVSEAKPHLIMHGFSSRLGKRVSDI 165
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 166 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 195
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
KT+ + V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 199 KTNHRSV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 251
>gi|402892256|ref|XP_003909334.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Papio
anubis]
Length = 291
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L+I LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIISHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 232
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
KT + V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 236 KTDHRNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|401425593|ref|XP_003877281.1| U3 small nuclear ribonucleoprotein (snRNP),putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322493526|emb|CBZ28814.1| U3 small nuclear ribonucleoprotein (snRNP),putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 288
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 100/163 (61%), Gaps = 3/163 (1%)
Query: 117 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
DE+++ ++ P +L+TT R S + F E+ ++PN+ RG+ + ++++ A+K
Sbjct: 73 DEYANAGQED--PHVLVTTSRNASQKLLEFAKEVRLIVPNAVRMNRGSLSVHQLMDAARK 130
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 236
+++T ++V+ ++ PD+L++ LP GPT F + LV R DI + G + P L+ N
Sbjct: 131 ENYTDVLVLQESQGVPDSLIVSHLPLGPTVTFTIHNLVARHDIDDVGTMSEQYPHLIFEN 190
Query: 237 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
F+T+LG R+ +++ LFP P+ RV+TF N+ DFI FRHH
Sbjct: 191 FSTKLGIRIKDVLRYLFP-VPKADASRVLTFDNENDFISFRHH 232
>gi|67476612|ref|XP_653870.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Entamoeba
histolytica HM-1:IMSS]
gi|56470867|gb|EAL48483.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Entamoeba histolytica HM-1:IMSS]
Length = 273
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 117/262 (44%), Gaps = 57/262 (21%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P + ITT + S++ F+ E+ +IPNS RG +K+++E + D T +I+VH N
Sbjct: 69 PNVFITTSKDPSSKLKEFVKEIKLIIPNSTRINRGNIQIKQLVETCRSHDVTDLIIVHEN 128
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R EPD ++I P GPTA+F L +V R + K + P L+ +N T LG R +
Sbjct: 129 RGEPDGMIISHFPYGPTAYFGLYNVVSRHETKTSKTFSEVYPHLIFDNLTTPLGKRFEMI 188
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCY 308
++ LFP P+ +RV+TF N D+I FRHH A+ Y
Sbjct: 189 LKYLFP-VPKSDSKRVMTFSNSSDYITFRHH-------------------------AYDY 222
Query: 309 YECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT 368
E Q V+ + GPRF L+ ++ GT D
Sbjct: 223 NE----------------------------EHQLVLQEI---GPRFDLRPYQIKLGTIDM 251
Query: 369 KGGEFEWVHKPEMDTSRRRFFL 390
E EW+ + ++++ R L
Sbjct: 252 DYAENEWILRSFINSASTRKLL 273
>gi|148682503|gb|EDL14450.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Mus
musculus]
Length = 299
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 91 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 150
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 151 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 210
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 211 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 240
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 252 LTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 296
>gi|332265577|ref|XP_003281794.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4
[Nomascus leucogenys]
Length = 409
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 201 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 260
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L+I LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 261 RGTPVGLIISHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 320
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 321 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 350
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 362 LTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 406
>gi|407042694|gb|EKE41482.1| U3 small nucleolar ribonucleoprotein IMP4, putative, partial
[Entamoeba nuttalli P19]
Length = 281
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 117/262 (44%), Gaps = 57/262 (21%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P + ITT + S++ F+ E+ +IPNS RG +K+++E + D T +I+VH N
Sbjct: 77 PNVFITTSKDPSSKLKEFVKEIKLIIPNSTRINRGNIQIKQLVETCRSHDVTDLIIVHEN 136
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R EPD ++I P GPTA+F L +V R + K + P L+ +N T LG R +
Sbjct: 137 RGEPDGMIISHFPYGPTAYFGLYNVVSRHETKTSKTFSEVYPHLIFDNLTTPLGKRFEMI 196
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCY 308
++ LFP P+ +RV+TF N D+I FRHH A+ Y
Sbjct: 197 LKYLFP-VPKSDSKRVMTFSNSSDYITFRHH-------------------------AYDY 230
Query: 309 YECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT 368
E Q V+ + GPRF L+ ++ GT D
Sbjct: 231 NE----------------------------EHQLVLQEI---GPRFDLRPYQIKLGTIDM 259
Query: 369 KGGEFEWVHKPEMDTSRRRFFL 390
E EW+ + ++++ R L
Sbjct: 260 DYAENEWILRSFINSAATRKLL 281
>gi|195151675|ref|XP_002016764.1| GL21897 [Drosophila persimilis]
gi|194111821|gb|EDW33864.1| GL21897 [Drosophila persimilis]
Length = 293
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 93/156 (59%), Gaps = 2/156 (1%)
Query: 126 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 184
GC PKI++TT S+R F+ EL + PN+ RG Y L ++ + + T ++
Sbjct: 77 GCQDPKIMLTTSHNPSSRLKMFMKELRLIFPNAQQMNRGKYQLTTLMHACRANNVTDFLI 136
Query: 185 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 244
VH +R PD+L+I LP GPT+ F +S +++R DI + G+ + P L+ NNF + +G R
Sbjct: 137 VHEHRGIPDSLVICHLPYGPTSFFNISDVIMRHDIPDIGHMSEQKPHLIFNNFKSPIGLR 196
Query: 245 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHR 280
++++ LFP P+ +RV++F N D I FRHH+
Sbjct: 197 TVQILKHLFP-VPKENSQRVISFLNHNDSIIFRHHQ 231
>gi|398365039|ref|NP_014324.3| Imp4p [Saccharomyces cerevisiae S288c]
gi|1730744|sp|P53941.1|IMP4_YEAST RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4; AltName: Full=Interacting
with MPP10 protein 4
gi|791110|emb|CAA60184.1| unknown [Saccharomyces cerevisiae]
gi|1301963|emb|CAA95949.1| unnamed protein product [Saccharomyces cerevisiae]
gi|190409064|gb|EDV12329.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Saccharomyces
cerevisiae RM11-1a]
gi|207341687|gb|EDZ69673.1| YNL075Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259149286|emb|CAY82528.1| Imp4p [Saccharomyces cerevisiae EC1118]
gi|285814576|tpg|DAA10470.1| TPA: Imp4p [Saccharomyces cerevisiae S288c]
gi|323335815|gb|EGA77094.1| Imp4p [Saccharomyces cerevisiae Vin13]
gi|323346901|gb|EGA81180.1| Imp4p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352573|gb|EGA85072.1| Imp4p [Saccharomyces cerevisiae VL3]
gi|365763333|gb|EHN04862.1| Imp4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 290
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 126/243 (51%), Gaps = 14/243 (5%)
Query: 44 KEKRSAVHAKLK--HQKKVEKRKKLKARDAAEKRAL--ELGEEPPARMTPRTIENTREPD 99
+E+R ++ K + ++++++++ + A+ + L EL E+ + R ++ +E +
Sbjct: 7 RERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQSLKESE 66
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
E DDE A S I+ P+I++TT R S R F E+ + PN+
Sbjct: 67 EADDLQVDDEYAAT------SGIMD----PRIIVTTSRDPSTRLSQFAKEIKLLFPNAVR 116
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
RG Y + +++ KK T ++V+H +R P +L I P GPTA F L +V+R DI
Sbjct: 117 LNRGNYVMPNLVDACKKSGTTDLVVLHEHRGVPTSLTISHFPHGPTAQFSLHNVVMRHDI 176
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
N GN + P L+ +NF T LG RV +++ LF P+ RV+TF N+ DFI R H
Sbjct: 177 INAGNQSEVNPHLIFDNFTTALGKRVVCILKHLFNAGPKKDSERVITFANRGDFISVRQH 236
Query: 280 RCV 282
V
Sbjct: 237 VYV 239
>gi|119576019|gb|EAW55615.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast),
isoform CRA_c [Homo sapiens]
Length = 313
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 105 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 164
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 165 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 224
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 225 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 254
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 266 LTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 310
>gi|291391389|ref|XP_002712437.1| PREDICTED: IMP4, U3 small nucleolar ribonucleoprotein, homolog
[Oryctolagus cuniculus]
Length = 373
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 88/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 165 PKIMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 224
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F +RLG RV +
Sbjct: 225 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFTSRLGKRVSDI 284
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 285 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 314
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 326 LTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 370
>gi|198477800|ref|XP_002136433.1| GA22540 [Drosophila pseudoobscura pseudoobscura]
gi|198145184|gb|EDY71888.1| GA22540 [Drosophila pseudoobscura pseudoobscura]
Length = 293
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 93/156 (59%), Gaps = 2/156 (1%)
Query: 126 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 184
GC PKI++TT S+R F+ EL + PN+ RG Y L ++ + + T ++
Sbjct: 77 GCQDPKIMLTTSHNPSSRLKMFMKELRLIFPNAQQMNRGKYQLTTLMHACRANNVTDFLI 136
Query: 185 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 244
VH +R PD+L+I LP GPT+ F +S +++R DI + G+ + P L+ NNF + +G R
Sbjct: 137 VHEHRGIPDSLVICHLPYGPTSFFNISDVIMRHDIPDIGHMSEQKPHLIFNNFKSPIGLR 196
Query: 245 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHR 280
++++ LFP P+ +RV++F N D I FRHH+
Sbjct: 197 TVQILKHLFP-VPKENSQRVISFLNHNDSIIFRHHQ 231
>gi|397464689|ref|XP_003804202.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Pan
paniscus]
Length = 291
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 232
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 244 LTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|354545941|emb|CCE42670.1| hypothetical protein CPAR2_203130 [Candida parapsilosis]
Length = 285
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 147/351 (41%), Gaps = 76/351 (21%)
Query: 44 KEKRSAVHAK---LKHQKKVEKRKKLKARDAAEK-RALELGEEPPARMTPRTIENTREPD 99
+E+R ++ K L+ + EKR++LKA A+ K + EL E+ ++ I + E D
Sbjct: 7 RERREYLYRKALQLQEASRTEKRQQLKAALASGKPLSKELAED--TQLQRDFIYDQSEQD 64
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
+ D D+ S L PK++ITT R S R F E+ + PNS
Sbjct: 65 QV-------------DIDDEYSALSGISDPKVVITTSRDPSVRLLQFSKEIKLMFPNSLK 111
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
RG Y + +++ + + +I++H +R P +L + P GPTA F L + LR D+
Sbjct: 112 LNRGNYIINDLVKTCTRVQVSDLIILHEHRGVPTSLTVSHFPHGPTAIFTLHNVKLRHDL 171
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
N GN + P L+ NF T LG RV +++Q LFP + RV+TF N D+I RHH
Sbjct: 172 PNLGNISESYPHLIFENFNTPLGKRVVKILQHLFPPGVKRDSSRVITFVNNDDYISVRHH 231
Query: 280 RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS 339
Y R E E
Sbjct: 232 ---------------------------IYVRTRDSVEVSE-------------------- 244
Query: 340 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
GPRF +KL ++ G D + EW + + T+ R+ +L
Sbjct: 245 ----------IGPRFEMKLYEIRLGLADNTDADVEWQVRRFIRTANRKNYL 285
>gi|354491619|ref|XP_003507952.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Cricetulus griseus]
gi|344257900|gb|EGW14004.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Cricetulus
griseus]
Length = 291
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 88/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKIMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F +RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFTSRLGKRVSDI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 232
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 244 LTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|402216404|gb|EJT96509.1| Brix-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 288
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 89/156 (57%), Gaps = 3/156 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F E+ V PN+H RG Y + ++ + D T ++++H +
Sbjct: 82 PKIVITTSRDPSSRLQQFAKEMRLVFPNAHRINRGNYVVSELATACRANDVTDLLILHEH 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 246
R PDAL++ P GPT F L + LR DI +G T P LV F++ LG+RV
Sbjct: 142 RGTPDALIVSHFPHGPTLFFTLHNVALRHDIAAYGQSTVSEQYPHLVFEGFSSPLGNRVM 201
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
++ LFP P+ +RV++F N+ DFI FRHH V
Sbjct: 202 DALRYLFP-VPKDDSKRVMSFVNESDFISFRHHVFV 236
>gi|57527503|ref|NP_001009700.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Rattus
norvegicus]
gi|190684705|ref|NP_848716.2| U3 small nucleolar ribonucleoprotein protein IMP4 [Mus musculus]
gi|73621061|sp|Q8VHZ7.1|IMP4_MOUSE RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4
gi|73621063|sp|Q5PQR5.1|IMP4_RAT RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4
gi|18478512|gb|AAL73190.1|AF334609_1 IMP4 [Mus musculus]
gi|26351353|dbj|BAC39313.1| unnamed protein product [Mus musculus]
gi|47682925|gb|AAH69930.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Mus
musculus]
gi|56269391|gb|AAH87066.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Rattus
norvegicus]
gi|74184986|dbj|BAE39105.1| unnamed protein product [Mus musculus]
gi|74185410|dbj|BAE30178.1| unnamed protein product [Mus musculus]
gi|74212607|dbj|BAE31042.1| unnamed protein product [Mus musculus]
gi|149046417|gb|EDL99310.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Rattus
norvegicus]
Length = 291
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 232
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 244 LTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|22902285|gb|AAH37602.1| Imp4 protein, partial [Mus musculus]
Length = 296
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 88 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 147
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 148 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 207
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 208 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 237
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 249 LTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 293
>gi|332814371|ref|XP_003309288.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Pan
troglodytes]
Length = 291
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 232
>gi|281207352|gb|EFA81535.1| brix domain-containing protein [Polysphondylium pallidum PN500]
Length = 592
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 96/167 (57%), Gaps = 5/167 (2%)
Query: 114 NDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 172
N DE++ + G A PK+ ITT R S+R F EL + PN+ RG + +K I+E
Sbjct: 375 NIDDEYA---RAGIADPKVFITTSRDPSSRLVQFSKELRMLFPNATKMNRGAHVIKDIVE 431
Query: 173 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPEL 232
+ D T +++ H +R EP L++ +P GPTA+F++ V+ DI++ + P L
Sbjct: 432 ACRANDVTDLVIAHEHRGEPVGLVVSHMPYGPTAYFEIVNCVMIHDIQDAPPASLAYPHL 491
Query: 233 VLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+ NNF T LG R +++ LFP P+ +R+VTF N D+I FRHH
Sbjct: 492 IFNNFTTPLGERTETILKYLFP-VPKDDSKRIVTFSNNSDYISFRHH 537
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 336 EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
EK + V+ L+E GPRF LKL +Q GT D + EWV+KP M++++ R FL
Sbjct: 540 EKDGHKNVL--LKEVGPRFELKLYKIQLGTVDQNEADIEWVYKPYMNSTKNRVFL 592
>gi|12845999|dbj|BAB26989.1| unnamed protein product [Mus musculus]
Length = 251
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 232
>gi|12850634|dbj|BAB28797.1| unnamed protein product [Mus musculus]
Length = 291
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 232
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
KT + V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 236 KTDHRNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|297712371|ref|XP_002832744.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4
isoform 1 [Pongo abelii]
gi|426337169|ref|XP_004032594.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4
[Gorilla gorilla gorilla]
gi|73621062|sp|Q5R947.2|IMP4_PONAB RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4
Length = 291
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 232
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 244 LTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|410947101|ref|XP_003980292.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Felis
catus]
Length = 291
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P ++ LP GPTA+F L +V+R DI + G + P L+++ F++RLG RV +
Sbjct: 143 RGTPVGFIVSHLPFGPTAYFTLCNVVMRHDIPDLGTVSEAKPHLIMHGFSSRLGKRVSDI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 232
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
KT+ + V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 236 KTNHRSV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|119576020|gb|EAW55616.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast),
isoform CRA_d [Homo sapiens]
Length = 325
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 105 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 164
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 165 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 224
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 225 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 254
>gi|15529982|ref|NP_219484.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Homo sapiens]
gi|73621060|sp|Q96G21.1|IMP4_HUMAN RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4; AltName: Full=Brix
domain-containing protein 4
gi|14603153|gb|AAH10042.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Homo
sapiens]
gi|34596248|gb|AAQ76804.1| hypothetical protein [Homo sapiens]
gi|62988689|gb|AAY24076.1| unknown [Homo sapiens]
gi|124000169|gb|ABM87593.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
[synthetic construct]
gi|157929232|gb|ABW03901.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
[synthetic construct]
gi|158258122|dbj|BAF85034.1| unnamed protein product [Homo sapiens]
gi|158260779|dbj|BAF82567.1| unnamed protein product [Homo sapiens]
gi|189053500|dbj|BAG35666.1| unnamed protein product [Homo sapiens]
Length = 291
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 232
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 244 LTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|151944459|gb|EDN62737.1| U3 snoRNP protein [Saccharomyces cerevisiae YJM789]
gi|256270261|gb|EEU05479.1| Imp4p [Saccharomyces cerevisiae JAY291]
gi|349580862|dbj|GAA26021.1| K7_Imp4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 290
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 126/243 (51%), Gaps = 14/243 (5%)
Query: 44 KEKRSAVHAKLK--HQKKVEKRKKLKARDAAEKRAL--ELGEEPPARMTPRTIENTREPD 99
+E+R ++ K + ++++++++ + A+ + L EL E+ + R ++ +E +
Sbjct: 7 RERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQSLKEGE 66
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
E DDE A S I+ P+I++TT R S R F E+ + PN+
Sbjct: 67 EADDLQVDDEYAAT------SGIMD----PRIIVTTSRDPSTRLSQFAKEIKLLFPNAVR 116
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
RG Y + +++ KK T ++V+H +R P +L I P GPTA F L +V+R DI
Sbjct: 117 LNRGNYVMPNLVDACKKSGTTDLVVLHEHRGVPTSLTISHFPHGPTAQFSLHNVVMRHDI 176
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
N GN + P L+ +NF T LG RV +++ LF P+ RV+TF N+ DFI R H
Sbjct: 177 INAGNQSEVNPHLIFDNFTTALGKRVVCILKHLFNAGPKKDSERVITFANRGDFISVRQH 236
Query: 280 RCV 282
V
Sbjct: 237 VYV 239
>gi|410210560|gb|JAA02499.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog [Pan
troglodytes]
gi|410252466|gb|JAA14200.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog [Pan
troglodytes]
gi|410295126|gb|JAA26163.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog [Pan
troglodytes]
Length = 291
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 232
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 244 LTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|55729975|emb|CAH91713.1| hypothetical protein [Pongo abelii]
Length = 290
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 82 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 142 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 201
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 202 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 231
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 243 LTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 287
>gi|444522019|gb|ELV13270.1| U3 small nucleolar ribonucleoprotein IMP4 [Tupaia chinensis]
Length = 311
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 103 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 162
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 163 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 222
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 223 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 252
>gi|321258817|ref|XP_003194129.1| rRNA primary transcript binding protein [Cryptococcus gattii WM276]
gi|317460600|gb|ADV22342.1| rRNA primary transcript binding protein, putative [Cryptococcus
gattii WM276]
Length = 288
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F EL V PNS+ RG +K ++ + + ++VVH +
Sbjct: 83 PKIVITTSRSPSSRLLQFSKELRLVFPNSYRLNRGNTVIKDLVSACNAQGVSDLVVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLNNFATRLGHRVGR 247
R PDAL++ LP GPT L + LR D+ N + P L+ + F+T+LG RV
Sbjct: 143 RGVPDALIVSHLPHGPTLSMTLHNVTLRHDVSSNSSTVSEQYPHLIFDGFSTKLGERVTG 202
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++++LFP P+ +RV+TF N+ DFI FRHH
Sbjct: 203 ILKALFP-VPKEDAKRVMTFKNENDFISFRHH 233
>gi|356605804|gb|AET24961.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 17 KK-2011]
Length = 171
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 1/148 (0%)
Query: 132 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 191
+ITT R S+R F E+ + PN+ RG YD+K++++ K +D T +I++ R
Sbjct: 1 VITTSRDPSSRLKMFSKEMKLIFPNAQRINRGHYDVKQVVQACKAQDSTDLIILTETRGN 60
Query: 192 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 251
PD +++ LP GPTA F ++ V+R DI N G + P L+ +N ++LG R +++
Sbjct: 61 PDGMIVCHLPFGPTAFFSMANTVMRHDIPNCGTMSEQYPHLIFDNLNSKLGVRFQTILKH 120
Query: 252 LFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
LFP P+ +RV+TF N DFI FRHH
Sbjct: 121 LFP-VPKSDSKRVITFSNSDDFISFRHH 147
>gi|388452440|ref|NP_001253160.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Macaca mulatta]
gi|355566079|gb|EHH22508.1| hypothetical protein EGK_05792 [Macaca mulatta]
gi|380787741|gb|AFE65746.1| U3 small nucleolar ribonucleoprotein IMP4 [Macaca mulatta]
gi|383422889|gb|AFH34658.1| U3 small nucleolar ribonucleoprotein IMP4 [Macaca mulatta]
Length = 291
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 232
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
KT + V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 236 KTDHRNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|346467449|gb|AEO33569.1| hypothetical protein [Amblyomma maculatum]
Length = 262
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 113/231 (48%), Gaps = 29/231 (12%)
Query: 56 HQKKVE-KRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPD------ETVCRPDDD 108
++K +E KRK ++ + K+ALE P + + R D E V +DD
Sbjct: 13 YRKSIEDKRKTIEEKKERLKQALEENRPIPYELREEALNLQRALDWDDPGGEGVVSQEDD 72
Query: 109 ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLK 168
E D PKI++TT R S++ F + RG Y++K
Sbjct: 73 EYRWAGVRD-----------PKIVVTTSRDPSSKLKQFAKRM----------NRGGYEMK 111
Query: 169 KIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH 228
++IE + + T IVVH R PD L++ LP GPTA+F + V+R DI N G +
Sbjct: 112 QLIEACRANEVTDFIVVHETRGNPDGLVVCHLPYGPTAYFTILNTVMRHDIPNIGTMSEA 171
Query: 229 IPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
P L+ +NF TRLG +++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 172 YPHLIFHNFKTRLGXXXMNILKYLFP-VPKEDSHRVITFANQDDYISFRHH 221
>gi|403259111|ref|XP_003922077.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4
[Saimiri boliviensis boliviensis]
Length = 291
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 232
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 244 LTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|253746805|gb|EET01834.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Giardia intestinalis ATCC 50581]
Length = 283
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 133/272 (48%), Gaps = 29/272 (10%)
Query: 63 RKKLKARDAAE-------KRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGND 115
RK+L+A +AA ++ALE G+ P + I E + D G D
Sbjct: 15 RKQLQASEAASYNHKEQLQQALETGKSIPDHLRADAINLA----EHMLFDDVTTKVKGLD 70
Query: 116 ADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 175
DE+++ PK+L+TT R S+R F EL + PN+ RG + + ++++ A+
Sbjct: 71 DDEYAN----AKIPKLLLTTSRNPSSRLRNFAKELRYLFPNTQRVNRGRHVISELVDVAR 126
Query: 176 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLN 235
FT ++++H R PD L++ LP GPTA+F LS +VLR + + H P L+
Sbjct: 127 SNGFTDLLIIHETRGNPDGLVLSHLPYGPTAYFTLSNVVLRSETNSDETVPEHAPHLIFE 186
Query: 236 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH--RCVPLEFISCYMWT 293
++LG R+ ++++ LFP + +RV +F N++D I FR+H R V E +
Sbjct: 187 GMHSKLGARLTQILKHLFPTGNK-SAKRVCSFINRQDSIVFRNHIYRKVGPEVV------ 239
Query: 294 ILCSYLTSIMKAFCYYECRYIFETKESKGSDA 325
L I FC + +T ES S+
Sbjct: 240 -----LKEIGPRFCLHPYMIRLDTVESTASET 266
>gi|356605822|gb|AET24970.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis plicata]
Length = 181
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
Query: 132 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 191
+ITT S+R AF E+ + PNS RG YD+K++++ + +D +IV+ R
Sbjct: 1 VITTSHDPSSRLKAFSKEMKLIFPNSQRINRGHYDIKQLVQACRAQDTXDLIVLTETRGN 60
Query: 192 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 251
PD +++ LP GPTA+F ++ +V+R DI N G + P+L+ N ++LG R +++
Sbjct: 61 PDGMIVCHLPFGPTAYFNMTNVVMRHDIPNCGTMSEQYPQLIFNKLDSKLGIRFTTILKH 120
Query: 252 LFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
LFP P+ RRV+TF N DFI FRHH
Sbjct: 121 LFP-VPKPDSRRVMTFANTNDFISFRHH 147
>gi|194222088|ref|XP_001915348.1| PREDICTED: u3 small nucleolar ribonucleoprotein protein IMP4-like
[Equus caballus]
Length = 356
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F EL + P + RG +++ ++ K T ++VVH +
Sbjct: 148 PKIMITTSRDPSSRLKMFAKELKLIFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 207
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P ++ LP GPTA+F L +V+R DI + G + P L+++ F++RLG RV +
Sbjct: 208 RGTPVGFIVSHLPFGPTAYFTLCNVVMRHDIPDLGTVSEAKPHLIMHGFSSRLGKRVSDI 267
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 268 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 297
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 309 LTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 353
>gi|157872351|ref|XP_001684724.1| putative U3 small nuclear ribonucleoprotein (snRNP) [Leishmania
major strain Friedlin]
gi|68127794|emb|CAJ06199.1| putative U3 small nuclear ribonucleoprotein (snRNP) [Leishmania
major strain Friedlin]
Length = 288
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 98/163 (60%), Gaps = 3/163 (1%)
Query: 117 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
DE+++ ++ P +L+TT R S + F E+ ++PN+ RG + ++++ A+K
Sbjct: 73 DEYANAGQED--PHVLVTTSRNASQKLLEFAKEVRLIVPNAVRMNRGNLSVHQLMDAARK 130
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 236
+++T ++V+ ++ PD+L++ LP GPT F + LV R DI G + P LV N
Sbjct: 131 ENYTDVLVLQESQGVPDSLIVSHLPLGPTVTFTIHNLVARHDIDGVGTMSEQYPHLVFEN 190
Query: 237 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
F+T+LG R+ +++ LFP P+ RV+TF N+ DFI FRHH
Sbjct: 191 FSTKLGIRIKDVLRYLFP-VPKADASRVLTFDNENDFISFRHH 232
>gi|154341641|ref|XP_001566772.1| putative U3 small nuclear ribonucleoprotein (snRNP) [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134064097|emb|CAM40291.1| putative U3 small nuclear ribonucleoprotein (snRNP) [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 288
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 126/274 (45%), Gaps = 58/274 (21%)
Query: 117 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
DE++S ++ P +L+TT R S + F E+ ++PN+ RG+ + +++ A+K
Sbjct: 73 DEYASAGQED--PHVLVTTSRNASQKLLEFAKEVRLIVPNAVRMNRGSLSVHQLMYAARK 130
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 236
+++T ++V+ ++ PD+L++ LP GPT F + LV R DI G + P L+ N
Sbjct: 131 ENYTDVVVLQESQGVPDSLIVSHLPLGPTVTFTIHNLVARHDIDGVGTMSEQYPHLIFEN 190
Query: 237 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILC 296
F+T+LG R+ +++ LFP P+ RV+TF N+ DF IS T
Sbjct: 191 FSTKLGLRIKDVLRYLFP-VPKADASRVLTFDNENDF-------------ISVRHHTF-- 234
Query: 297 SYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 356
K EK +Q L E GPRF L
Sbjct: 235 -------------------------------------KKEKGKRQ---VELTEVGPRFEL 254
Query: 357 KLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+ GT + E EWV +P M+T+++R L
Sbjct: 255 TPYRVVLGTLEMDDAETEWVLQPYMNTAKKRRLL 288
>gi|37654250|gb|AAQ96230.1| LRRGT00017 [Rattus norvegicus]
Length = 391
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 232
>gi|431892184|gb|ELK02631.1| U3 small nucleolar ribonucleoprotein IMP4 [Pteropus alecto]
Length = 298
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 90 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 149
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P ++ LP GPTA+F L +V+R D+ + G + P L+++ F++RLG RV +
Sbjct: 150 RGTPVGFIVSHLPFGPTAYFTLCNVVMRHDVPDLGTVSEAKPHLIMHGFSSRLGKRVSDI 209
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 210 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 239
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
KT+ + V L E GPRF LKL ++ GT + + + EW P +T+ +R FL
Sbjct: 243 KTNHRNV--ELTEVGPRFELKLYMIRQGTLEQEATADVEWRWHPYTNTAHKRVFL 295
>gi|294654719|ref|XP_456780.2| DEHA2A10318p [Debaryomyces hansenii CBS767]
gi|218512082|sp|Q6BYD9.2|IMP4_DEBHA RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4
gi|199429095|emb|CAG84746.2| DEHA2A10318p [Debaryomyces hansenii CBS767]
Length = 284
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 146/351 (41%), Gaps = 78/351 (22%)
Query: 44 KEKRSAVHAK---LKHQKKVEKRKKLKARDAAEK-RALELGEEPPARMTPRTIENTREPD 99
+E+R ++ K L+ EKR++LKA A+ K + EL E+ + ++ D
Sbjct: 7 RERREYLYRKSLELQESSLTEKRQQLKAALASGKPLSKELAED-------KELQKDFIYD 59
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
E+ DDE A + E PK+LITT R S + F E+ + PNS
Sbjct: 60 ESEQTEIDDEYSALSGISE----------PKVLITTSRNPSVKLLQFSKEIKLMFPNSIK 109
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
RG Y + ++ ++ + +I++H +R P +L I P GP+ F L + LR D+
Sbjct: 110 LNRGNYVITDLVATCQRVQISDLIILHEHRGIPTSLTISHFPHGPSIIFTLHNVKLRHDL 169
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
GN + P LV NF + LG RV ++++ LFP + RV+TF N DFI RHH
Sbjct: 170 PEIGNSSESYPHLVFENFTSELGKRVVKIMKHLFPPGVKKDSSRVITFINNDDFISVRHH 229
Query: 280 RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS 339
V K KD
Sbjct: 230 MYV----------------------------------------------KTKDT------ 237
Query: 340 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L E GPRF ++L L+ G D K E EW + + T R+ +L
Sbjct: 238 -----VELSEVGPRFEMRLYELRLGLLDNKDSEVEWQLRRFIRTGNRKNYL 283
>gi|448114296|ref|XP_004202539.1| Piso0_001380 [Millerozyma farinosa CBS 7064]
gi|359383407|emb|CCE79323.1| Piso0_001380 [Millerozyma farinosa CBS 7064]
Length = 284
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 110/222 (49%), Gaps = 6/222 (2%)
Query: 63 RKKLKARDAA--EKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFS 120
RK+L+ R+A+ EKR + P+ I +E + + +++ + D+
Sbjct: 15 RKELELREASLSEKRQQLKAALASGKPLPKDIAEDKELQKNFIYDESEQV----EVDDEY 70
Query: 121 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 180
S L PK+++TT R S + F E+ PNS RG Y + I+ + T
Sbjct: 71 SALSGITEPKVIVTTSRDPSVKLLQFSKEMKLFFPNSMKLNRGNYIISDIVASCLRSQVT 130
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 240
++V+H +R P +L I P GP+A F L + LR D+ N GN + P L+ NF T
Sbjct: 131 DLVVLHEHRGTPTSLSISHFPHGPSAMFTLHNVKLRHDLPNIGNASEAYPHLIFENFTTD 190
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
LG RV ++++ LFP + RV+TF N DFI RHH V
Sbjct: 191 LGKRVVKILKHLFPPGAKKDSSRVITFVNNEDFISVRHHVYV 232
>gi|308163084|gb|EFO65446.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Giardia lamblia P15]
Length = 283
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 132/272 (48%), Gaps = 29/272 (10%)
Query: 63 RKKLKARDAAE-------KRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGND 115
RK+L+A +AA ++ALE G+ P + I E + D G D
Sbjct: 15 RKQLQASEAASYTHKEQLQKALETGKSIPDHLRADAINLA----EHMLFDDVTTKLKGLD 70
Query: 116 ADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 175
DE+++ PK+L+TT R S+R F EL + PN+ RG + + ++++ A+
Sbjct: 71 DDEYAN----AKVPKLLLTTSRNPSSRLRNFAKELRYLFPNTQRVNRGRHVISELVDVAR 126
Query: 176 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLN 235
FT ++++H R PD L++ LP GPTA+F LS +VLR + + H P L+
Sbjct: 127 SSGFTDLLILHETRGNPDGLVLSHLPYGPTAYFTLSNVVLRSETNSDETVPEHAPHLIFE 186
Query: 236 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH--RCVPLEFISCYMWT 293
++LG R+ ++++ LFP + +RV +F N++D I FR+H R V E +
Sbjct: 187 GMHSKLGTRLTQILKHLFPTGGK-SAKRVCSFINRQDSIVFRNHVYRKVGPEVV------ 239
Query: 294 ILCSYLTSIMKAFCYYECRYIFETKESKGSDA 325
L I FC + +T ES +
Sbjct: 240 -----LKEIGPRFCLHPYMIRLDTMESTAGET 266
>gi|367002656|ref|XP_003686062.1| hypothetical protein TPHA_0F01440 [Tetrapisispora phaffii CBS 4417]
gi|357524362|emb|CCE63628.1| hypothetical protein TPHA_0F01440 [Tetrapisispora phaffii CBS 4417]
Length = 290
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 92/169 (54%)
Query: 114 NDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEY 173
+D D+ S P++++TT R S R F E+ + PN+ RG Y + ++
Sbjct: 71 DDIDDEYSETSGIVEPRLIVTTSRDPSTRLSQFAKEIKLLFPNAVRLNRGNYIMPNLVGA 130
Query: 174 AKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELV 233
K + ++V+H +R P +L I P GPTA F L +VLR DI NHGN + P L+
Sbjct: 131 CIKSGTSDLVVLHEHRGVPTSLTISHFPHGPTAFFTLHNVVLRHDILNHGNQSEVNPHLI 190
Query: 234 LNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
+NF T LG RV ++++ LF SP+ RV+TF N+ DFI R H V
Sbjct: 191 FDNFTTPLGERVVKVLKHLFSPSPKKDSPRVITFANRGDFISVRQHVYV 239
>gi|402593092|gb|EJW87019.1| brix domain-containing protein [Wuchereria bancrofti]
Length = 306
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 100/185 (54%), Gaps = 19/185 (10%)
Query: 109 ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS--------------ELLSVI 154
E+ A +D ++ PK+++TT R S + F+ E+ +
Sbjct: 63 EVLAIDDEYRYAG----AADPKVVLTTSREPSAKLKIFLKASIFRLLIFQIQDFEMRLMF 118
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
PN+ RG YD+KK+I+ K D T I++H R PD +++ LP GPTA+F L+ +V
Sbjct: 119 PNAQRINRGHYDIKKLIQACKANDITDFILLHETRGNPDGMIVCHLPFGPTAYFTLANVV 178
Query: 215 LRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFI 274
+R ++ + G + P L+ ++ + LG R+ +++ LFP P+ RR+VTF N +DFI
Sbjct: 179 MRHEVPDCGTISEEYPHLIFDSLNSALGRRLTTILKHLFP-VPKIDSRRIVTFINTQDFI 237
Query: 275 FFRHH 279
FRHH
Sbjct: 238 SFRHH 242
>gi|448526232|ref|XP_003869302.1| Imp4 SSU processome component [Candida orthopsilosis Co 90-125]
gi|380353655|emb|CCG23166.1| Imp4 SSU processome component [Candida orthopsilosis]
Length = 285
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 122/243 (50%), Gaps = 19/243 (7%)
Query: 44 KEKRSAVHAK---LKHQKKVEKRKKLKARDAAEK-RALELGEEPPARMTPRTIENTREPD 99
+E+R ++ K L+ + EKR++LKA A+ K + EL E+ ++ I + E D
Sbjct: 7 RERREYLYRKALQLQEASRTEKRQQLKAALASGKPLSKELAED--TQLQRDFIYDQSEQD 64
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
+ D D+ S L PK++ITT R S R F E+ + PNS
Sbjct: 65 QL-------------DIDDEYSALSGISDPKVVITTSRDPSVRLLQFSKEIKLMFPNSLK 111
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
RG Y + +++ + + +I++H +R P +L + P GPTA F L + LR D+
Sbjct: 112 LNRGNYIINDLVKTCTRVQVSDLIILHEHRGVPTSLTVSHFPHGPTAIFTLHNVKLRHDL 171
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
N GN + P L+ NF T LG RV +++Q LFP + RV+TF N D+I RHH
Sbjct: 172 PNLGNISESYPHLIFENFNTPLGKRVVKILQHLFPPGVKRDSSRVITFVNNDDYISVRHH 231
Query: 280 RCV 282
V
Sbjct: 232 VYV 234
>gi|89954461|gb|ABD83653.1| disrupted snoRNP component [synthetic construct]
Length = 317
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 57/262 (21%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P+I++TT R S R F E+ + PN+ RG Y + +++ KK T ++V+H +
Sbjct: 113 PRIIVTTSRDPSTRLSQFAKEIKLLFPNAVRLNRGNYVMPNLVDACKKSGTTDLVVLHEH 172
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P +L I P GPTA F L +V+R DI N GN + P L+ +NF T LG RV +
Sbjct: 173 RGVPTSLTISHFPHGPTAQFSLHNVVMRHDIINAGNQSEVNPHLIFDNFTTALGKRVVCI 232
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCY 308
++ LF P+ RV+TF N+ DFI R H Y
Sbjct: 233 LKHLFNAGPKKDSERVITFANRGDFISVRQH---------------------------VY 265
Query: 309 YECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT 368
R E E GPRF ++L L+ GT +
Sbjct: 266 VRTREGVEIAE------------------------------VGPRFEMRLFELRLGTLEN 295
Query: 369 KGGEFEWVHKPEMDTSRRRFFL 390
K + EW + + T+ ++ +L
Sbjct: 296 KDADVEWQLRRFIRTANKKDYL 317
>gi|4262378|gb|AAD14602.1| stage specific peptide 24 [Trypanosoma cruzi]
Length = 287
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P++L+TT R S + F E+ VIP++ RG ++++++ A++ ++ ++V+ +
Sbjct: 83 PRVLVTTSREPSQKLLEFAKEIRLVIPSAVRMNRGNLSVRQLMDAARRGQYSDVVVLQES 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
+ PD+L + LP GPT F + LV R DI++ G + P L+ NF TRLG RV +
Sbjct: 143 QGVPDSLTVSHLPLGPTVVFTIHNLVTRHDIQDVGTMSEQHPHLIFENFTTRLGRRVRDV 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ R RV+TF NQ DF+ FRHH
Sbjct: 203 LKFLFP-VPKPRPTRVLTFDNQNDFVSFRHH 232
>gi|159115488|ref|XP_001707967.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Giardia lamblia ATCC 50803]
gi|157436075|gb|EDO80293.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Giardia lamblia ATCC 50803]
Length = 283
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 132/272 (48%), Gaps = 29/272 (10%)
Query: 63 RKKLKARDAAE-------KRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGND 115
RK+L+A +AA ++ALE G+ P + I E + D G D
Sbjct: 15 RKQLQASEAASYTHKEQLQKALETGKSIPDHLRADAINLA----EHMLFDDVTTKVKGLD 70
Query: 116 ADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 175
DE+++ PK+L+TT R S+R F EL + PN+ RG + + ++++ A+
Sbjct: 71 DDEYAN----AKVPKLLLTTSRNPSSRLRNFAKELRYLFPNTQRVNRGRHVISELVDVAR 126
Query: 176 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLN 235
FT ++++H R PD L++ LP GPTA+F LS +VLR + + H P L+
Sbjct: 127 SSGFTDLLILHETRGNPDGLVLSHLPYGPTAYFTLSNVVLRSETNSDETVPEHAPHLIFE 186
Query: 236 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH--RCVPLEFISCYMWT 293
++LG R+ ++++ LFP + +RV +F N++D I FR+H R V E +
Sbjct: 187 GMHSKLGARLTQILKHLFPTGGK-SAKRVCSFINRQDSIVFRNHVYRKVGPEVV------ 239
Query: 294 ILCSYLTSIMKAFCYYECRYIFETKESKGSDA 325
L I FC + +T ES +
Sbjct: 240 -----LKEIGPRFCLHPYMIRLDTMESTAGET 266
>gi|448111744|ref|XP_004201914.1| Piso0_001380 [Millerozyma farinosa CBS 7064]
gi|359464903|emb|CCE88608.1| Piso0_001380 [Millerozyma farinosa CBS 7064]
Length = 285
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 110/222 (49%), Gaps = 6/222 (2%)
Query: 63 RKKLKARDAA--EKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFS 120
RK+L+ R+A+ EKR + P+ I +E + + +++ + D+
Sbjct: 15 RKELELREASLSEKRQQLKAALASGKPLPKDIAEDKELQKNFIYDESEQV----EVDDEY 70
Query: 121 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 180
S L PK+++TT R S + F E+ PNS RG Y + I+ + T
Sbjct: 71 SALSGITEPKVIVTTSRDPSVKLLQFSKEMKLFFPNSMKLNRGNYIISDIVASCLRSQVT 130
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 240
++V+H +R P +L I P GP+A F L + LR D+ N GN + P L+ NF T
Sbjct: 131 DLVVLHEHRGTPTSLSISHFPHGPSAMFTLHNVKLRHDLPNIGNASEVYPHLIFENFTTD 190
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
LG RV ++++ LFP + RV+TF N DFI RHH V
Sbjct: 191 LGKRVVKILKHLFPPGAKKDSSRVITFVNNEDFISVRHHVYV 232
>gi|146093738|ref|XP_001466980.1| putative U3 small nuclear ribonucleoprotein (snRNP) [Leishmania
infantum JPCM5]
gi|398019370|ref|XP_003862849.1| U3 small nuclear ribonucloprotein (snRNP), putative [Leishmania
donovani]
gi|134071344|emb|CAM70030.1| putative U3 small nuclear ribonucleoprotein (snRNP) [Leishmania
infantum JPCM5]
gi|322501080|emb|CBZ36157.1| U3 small nuclear ribonucloprotein (snRNP), putative [Leishmania
donovani]
Length = 288
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 98/163 (60%), Gaps = 3/163 (1%)
Query: 117 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
DE+++ ++ P +L+TT R S + F E+ ++PN+ RG + ++++ A+K
Sbjct: 73 DEYANAGQED--PHVLVTTSRNASQKLLEFAKEVRLIVPNAVRMNRGNLSVHQLMDAARK 130
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 236
+++T ++V+ ++ PD+L + LP GPT F + LV R DI+ G + P L+ N
Sbjct: 131 ENYTDVLVLQESQGVPDSLTVSHLPLGPTVTFTIHNLVARHDIEGVGTMSEQYPHLIFEN 190
Query: 237 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
F+T+LG R+ +++ LFP P+ RV+TF N+ DFI FRHH
Sbjct: 191 FSTKLGIRIKDVLRYLFP-VPKADASRVLTFDNENDFISFRHH 232
>gi|344290030|ref|XP_003416742.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Loxodonta africana]
Length = 342
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 134 PKIMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 193
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L++ LP GPTA+F L +V+R DI + G + P LV++ F++ LG RV +
Sbjct: 194 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLVMHGFSSHLGKRVSDI 253
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ R++TF N+ D+I FRHH
Sbjct: 254 LRYLFP-VPKDDSHRIITFANKDDYISFRHH 283
>gi|50308599|ref|XP_454302.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643437|emb|CAG99389.1| KLLA0E07833p [Kluyveromyces lactis]
Length = 283
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 92/167 (55%), Gaps = 3/167 (1%)
Query: 117 DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 175
DE+S+ G A PKI++TT R S R F E+ + P + RG Y + +++ +
Sbjct: 68 DEYSAT--SGIAEPKIIVTTSRDPSTRLSQFAKEIKLLFPTAVRLNRGNYIMPNLVDACQ 125
Query: 176 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLN 235
+ ++V+H +R P +L + P GPTA F L +VLR DI N GN + P L+ +
Sbjct: 126 TSGTSDLVVLHEHRGVPTSLTVSHFPHGPTAFFTLHNVVLRHDILNSGNQSEVNPHLIFD 185
Query: 236 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
NF T LG RV +++ LFP P+ RV+TF N+ DFI R H V
Sbjct: 186 NFTTPLGKRVETILKHLFPPGPKKDAARVITFANRGDFISVRQHVYV 232
>gi|149239306|ref|XP_001525529.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146451022|gb|EDK45278.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 287
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 120/242 (49%), Gaps = 17/242 (7%)
Query: 44 KEKRSAVHAK---LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
+E+R ++ K L+ EKR++LKA AL LG+ + ++ + D
Sbjct: 7 RERREYLYRKALQLQESSLTEKRQQLKA-------ALALGKPLSKELAE---DDKLQRDF 56
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
+ D+L D D+ S L PK++ITT R S R F E+ + PNS
Sbjct: 57 IYDQSVQDQL----DIDDEYSALSGISDPKVIITTSRDPSVRLLQFSKEIKLMFPNSLKL 112
Query: 161 KRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 220
RG Y + +++ + + +I++H +R P +L + P GPTA F L + LR D+
Sbjct: 113 NRGNYIINDLVKTCTRVQISDLIILHEHRGVPTSLTVSHFPHGPTAIFTLHNVKLRHDLP 172
Query: 221 NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHR 280
N GN + P L+ NF T LG RV +++Q LFP + RV+TF N DFI RHH
Sbjct: 173 NLGNISESYPHLIFENFNTALGKRVVKILQHLFPPGVKRDSSRVITFVNNDDFISVRHHV 232
Query: 281 CV 282
V
Sbjct: 233 YV 234
>gi|254580607|ref|XP_002496289.1| ZYRO0C14982p [Zygosaccharomyces rouxii]
gi|238939180|emb|CAR27356.1| ZYRO0C14982p [Zygosaccharomyces rouxii]
Length = 284
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 93/175 (53%)
Query: 108 DELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDL 167
DE D D+ + P++++TT R S R F E+ + P S RG + +
Sbjct: 59 DESKDAVDIDDEYAATSGISDPRVVVTTSRSPSARLSQFAKEIKLLFPTSVRLNRGNFIV 118
Query: 168 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG 227
+++ K + ++++H +R P +L I LP GPTA F L +VLR DI N GN +
Sbjct: 119 NNLVDACNKSGTSDLVLLHEHRGVPTSLTISHLPHGPTAFFTLHNVVLRHDILNRGNQSE 178
Query: 228 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
P L+ +NF T LGHRV +++ LFP P+ RV+TF N+ DFI R H V
Sbjct: 179 VNPHLIFDNFTTPLGHRVETILKHLFPPEPKEDSPRVITFANRGDFISVRQHVYV 233
>gi|324513461|gb|ADY45531.1| Brix domain-containing protein [Ascaris suum]
Length = 193
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 78/127 (61%), Gaps = 1/127 (0%)
Query: 153 VIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSK 212
+ PN+ RG YD++K+++ + D T I++H R PD L++ LP GPTA+F LS
Sbjct: 4 MFPNAQAINRGHYDVRKLVQACRANDVTDFILIHETRGSPDGLIVCHLPFGPTAYFNLSN 63
Query: 213 LVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRD 272
+V+R D+ + P L+ NN +RLG R+ +++ LFP P+ RR++TF N+ D
Sbjct: 64 VVMRHDVPGRKTISEVYPHLIFNNMNSRLGQRITSILKYLFP-VPKPESRRIITFSNEED 122
Query: 273 FIFFRHH 279
F+ FRHH
Sbjct: 123 FVSFRHH 129
>gi|440290633|gb|ELP83998.1| brix domain containing protein ZK795.3, putative [Entamoeba
invadens IP1]
Length = 274
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 108/208 (51%), Gaps = 5/208 (2%)
Query: 73 EKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCA-PKI 131
+KRA+E E A P T + E+ +D A N D S K G + P +
Sbjct: 16 KKRAIEKAMEG-ATAIPVTARGDFDQLESTLNYEDASSRAVNAYD--SEYAKSGISDPVV 72
Query: 132 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 191
+TT R S++ F E+ +IPNS RG +K ++E K D T +++VH +R
Sbjct: 73 FVTTSRDPSSKLKEFSKEIKLIIPNSTRLNRGNLQVKNLVETCKSHDVTDLVIVHEHRGI 132
Query: 192 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 251
PD L++ P GPTA+F L +V R D K + P L+ +N T LG R ++++
Sbjct: 133 PDGLIVTHFPFGPTAYFGLYNVVSRHDAKTKKTLSQTAPHLIFDNLTTPLGKRFEMILKN 192
Query: 252 LFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
LFP P+ +R++TF N +D+I FRHH
Sbjct: 193 LFP-VPKPDTKRIMTFANSKDYISFRHH 219
>gi|392578604|gb|EIW71732.1| hypothetical protein TREMEDRAFT_67933 [Tremella mesenterica DSM
1558]
Length = 288
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 88/153 (57%), Gaps = 3/153 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S+R F EL + PNS RG +++ + T +I++H +
Sbjct: 82 PKIVITTSRSPSSRLLQFSKELRLIFPNSFRLNRGNTTSPSLVQACLSQGMTDLIIIHEH 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 246
R PDAL+I LP GPT L + LR D+ +H T P L+ F+T+LG RV
Sbjct: 142 RGVPDALIISHLPHGPTISMTLHNVTLRHDVSSHSESTVSEQYPHLIFEGFSTKLGERVK 201
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++++LFP P+ +RV++F N++DFI FRHH
Sbjct: 202 GILKALFP-VPKEDAKRVMSFVNEKDFISFRHH 233
>gi|356605814|gb|AET24966.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 12 KK-2010]
Length = 184
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
Query: 132 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 191
+ITT R S+R F E+ V PNS RG YD+K++++ + +D T +IV+ R +
Sbjct: 1 VITTSRDPSSRLKMFSKEMRLVFPNSQRINRGHYDVKQLVQACRAQDTTDLIVLTETRGQ 60
Query: 192 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 251
PD +++ LP GPTA F ++ +V+R DI N G + P L+ N ++LG R +++
Sbjct: 61 PDGMIVCHLPFGPTAFFSMANVVMRHDIPNCGTMSEQYPHLIFNKLDSKLGLRFTSILKH 120
Query: 252 LFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
LFP P+ +RV+TF N D++ +RHH
Sbjct: 121 LFP-VPKSDSKRVMTFANTDDYLSYRHH 147
>gi|351703158|gb|EHB06077.1| U3 small nucleolar ribonucleoprotein IMP4 [Heterocephalus glaber]
Length = 291
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 88/151 (58%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P L+I LP GPTA+F + +V+R DI + G + P L+ + F++ LG RV +
Sbjct: 143 RGTPVGLIISHLPFGPTAYFTICNVVMRHDIPDLGTMSEAKPHLIFHGFSSHLGKRVSDI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 232
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT + + + EW P +TSR+R FL
Sbjct: 244 LTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTSRKRVFL 288
>gi|407417024|gb|EKF37900.1| ribosome biogenesis protein, putative [Trypanosoma cruzi
marinkellei]
Length = 287
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P++L+TT R S + F E+ VIP++ RG +++++E A++ ++ ++V+ +
Sbjct: 83 PRVLVTTSREPSQKLLEFAKEIRLVIPSAVRMNRGNLSVRQLMEAARRGQYSDVVVLQES 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
+ PD++ + LP GPT F + LV R DI++ G + P L+ NF TRLG RV +
Sbjct: 143 QGVPDSITVSHLPLGPTVVFTIHNLVTRHDIQDVGTMSEQHPHLIFENFTTRLGRRVRDV 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ DF+ FRHH
Sbjct: 203 LKFLFP-VPKPDATRVLTFDNQNDFVSFRHH 232
>gi|328870505|gb|EGG18879.1| hypothetical protein DFA_02618 [Dictyostelium fasciculatum]
Length = 286
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 87/151 (57%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+ +TT R S R F EL + PNS RG + +K++++ + D T +++ H +
Sbjct: 82 PKVFVTTSRDPSARLTQFAKELKMLFPNSQKMNRGAHVIKELVDACRANDVTDLVIAHEH 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
EP+ L++ LP GPTA+F++ ++ DI++ + P L+ NNF T LG R +
Sbjct: 142 SGEPNGLVVCHLPYGPTAYFEIVNCIMIHDIQDAPPASLAYPHLIFNNFTTPLGSRTENI 201
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P +RV+TF N D+I FRHH
Sbjct: 202 LKYLFP-VPAQDSKRVLTFSNNNDYISFRHH 231
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 336 EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
EK + V+ L+E GPRF LKL +Q GT D + EWV++P M++++ R FL
Sbjct: 234 EKDGHKNVL--LKEVGPRFELKLYKIQLGTIDQPEADVEWVYRPYMNSTKNRTFL 286
>gi|443899245|dbj|GAC76576.1| U3 small nucleolar ribonucleoprotein [Pseudozyma antarctica T-34]
Length = 289
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 126/250 (50%), Gaps = 26/250 (10%)
Query: 42 KNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDET 101
+ +E+R ++ K K+ K++ R A + AL G+ PA + R D T
Sbjct: 5 QTRERREYIYKKALESKE----KQIYDRKQAIREALASGKPLPAEL--------RGKDAT 52
Query: 102 VCRPDDDELFAGNDA------DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVI 154
D + L A DA DE+S + G P++L+TT R S R F E+ +
Sbjct: 53 DLGRDLN-LDAAQDAPGTSIDDEYS---RAGTYDPRVLVTTSRDPSTRLTQFAKEVRLLF 108
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
PNS RG+Y + + A+ T ++V+H +R PDA+++ P GPT F L +V
Sbjct: 109 PNSTRLNRGSYTVADLAAAARANGITDMVVLHEHRGVPDAMVVSHFPHGPTLLFTLHNVV 168
Query: 215 LRKDIKNHGNPT--GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRD 272
LR ++ H N T P L+ F+++LG RV ++ LFP P+ +RV+TF NQ D
Sbjct: 169 LRHEVSAHANSTVSEQYPHLIFEGFSSKLGARVMSALKFLFP-VPKDDSKRVMTFANQND 227
Query: 273 FIFFRHHRCV 282
FI FRHH V
Sbjct: 228 FIAFRHHVFV 237
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 387
KTS ++V +L E GPRF ++ ++ GT D + EWV +P M+++++R
Sbjct: 238 KTSHREV--QLAEVGPRFDARVFEIKQGTIDQTNADTEWVLRPYMNSAKKR 286
>gi|365758678|gb|EHN00509.1| Imp4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401842762|gb|EJT44832.1| IMP4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 290
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 125/243 (51%), Gaps = 14/243 (5%)
Query: 44 KEKRSAVHAKLK--HQKKVEKRKKLKARDAAEKRAL--ELGEEPPARMTPRTIENTREPD 99
+E+R ++ K + ++++++++ + A+ + L EL E+ + R ++ +E +
Sbjct: 7 RERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDETLQKDFRYDQSLKEGE 66
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
E DDE A + + P+I++TT R S R F E+ + PN+
Sbjct: 67 EADDLQVDDEYAATSGITD----------PRIIVTTSRDPSTRLSQFAKEIKLLFPNAVR 116
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
RG Y + +++ KK T ++V+H +R P +L I P GPTA F L +V+R DI
Sbjct: 117 LNRGNYVMPNLVDACKKSGTTDLVVLHEHRGVPTSLTISHFPHGPTAQFSLHNVVMRHDI 176
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+ GN + P L+ +NF T LG RV +++ LF P+ RV+TF N+ DFI R H
Sbjct: 177 IDGGNQSEVNPHLIFDNFTTDLGKRVECILKHLFNAGPKKDSERVITFANKGDFISVRQH 236
Query: 280 RCV 282
V
Sbjct: 237 VYV 239
>gi|50551469|ref|XP_503208.1| YALI0D23859p [Yarrowia lipolytica]
gi|73621064|sp|Q6C804.1|IMP4_YARLI RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4
gi|49649076|emb|CAG81408.1| YALI0D23859p [Yarrowia lipolytica CLIB122]
Length = 283
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 124/244 (50%), Gaps = 19/244 (7%)
Query: 42 KNKEKRSAVHAK---LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
+ +E+R ++ K L+ K++KR++LKA AL G+ P+ + + E
Sbjct: 5 QARERREYLYRKSLQLQEATKIQKRQQLKA-------ALASGKP-----LPKDVADDEEL 52
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
+T+ DE DE+S+ + PK+++TT R S R F E+ + P S
Sbjct: 53 RKTIAY---DESVQDEIDDEYSA-MSGITDPKVVVTTSRDPSTRLSQFAKEVKLLFPTSI 108
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
RG L ++ K + +IV+H +R P A+ + P GPTA+F L +VLR D
Sbjct: 109 RLNRGGTVLPSLVSACKTSASSDLIVLHEHRGVPTAMTVSHFPHGPTAYFSLHNVVLRHD 168
Query: 219 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
+ + GN + P L+ +NF T LG RV ++++ LFP + RV+TF N+ DFI R
Sbjct: 169 LPDTGNMSEVHPHLIFDNFTTDLGKRVVQILKHLFPPGVKKDSARVITFANRGDFISVRQ 228
Query: 279 HRCV 282
H V
Sbjct: 229 HVYV 232
>gi|71406162|ref|XP_805640.1| U3 small nuclear ribonucloprotein (snRNP) [Trypanosoma cruzi strain
CL Brener]
gi|70869129|gb|EAN83789.1| U3 small nuclear ribonucloprotein (snRNP), putative [Trypanosoma
cruzi]
Length = 287
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P++L+TT R S + F E+ VIP++ RG ++++++ A++ ++ ++V+ +
Sbjct: 83 PRVLVTTSREPSQKLLEFAKEIRLVIPSAVRMNRGNLSVRQLMDAARRGQYSDVVVLQES 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
+ PD+L + LP GPT F + LV R DI++ G + P L+ NF TRLG RV +
Sbjct: 143 QGVPDSLTVSHLPLGPTVVFTIHNLVTRHDIQDVGTMSEQHPHLIFENFTTRLGRRVRDV 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ DF+ FRHH
Sbjct: 203 LKFLFP-VPKPDATRVLTFDNQNDFVSFRHH 232
>gi|71424770|ref|XP_812905.1| U3 small nuclear ribonucloprotein (snRNP) [Trypanosoma cruzi strain
CL Brener]
gi|70877738|gb|EAN91054.1| U3 small nuclear ribonucloprotein (snRNP), putative [Trypanosoma
cruzi]
gi|407852080|gb|EKG05738.1| ribosome biogenesis protein, putative [Trypanosoma cruzi]
Length = 287
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P++L+TT R S + F E+ VIP++ RG ++++++ A++ ++ ++V+ +
Sbjct: 83 PRVLVTTSREPSQKLLEFAKEIRLVIPSAVRMNRGNLSVRQLMDAARRGQYSDVVVLQES 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
+ PD+L + LP GPT F + LV R DI++ G + P L+ NF TRLG RV +
Sbjct: 143 QGVPDSLTVSHLPLGPTVVFTIHNLVTRHDIQDVGTMSEQHPHLIFENFTTRLGRRVRDV 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ DF+ FRHH
Sbjct: 203 LKFLFP-VPKPDATRVLTFDNQNDFVSFRHH 232
>gi|452821416|gb|EME28447.1| hypothetical protein Gasu_41360 [Galdieria sulphuraria]
Length = 292
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 111/224 (49%), Gaps = 25/224 (11%)
Query: 64 KKLKARDAAEKRALELGEEPPARM---TPRTIENTREPDETVCRP---DDDELFAGNDAD 117
KK+K RDA + G+ P + E+ D R DDE N+ D
Sbjct: 26 KKIKVRDA-----IAAGKNVPTELQEEAQELFESANYLDSATDRAYSHVDDEYARANEID 80
Query: 118 EFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKK 177
PK++ITT R S+R F E+ + PNS RG ++ ++ K
Sbjct: 81 -----------PKVVITTSRDPSSRLSQFAKEVKLLFPNSQRLNRGNLVIRDLMTACKNN 129
Query: 178 DFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI--KNHGNPTGHIPELVLN 235
T +I++ R +PD L++ LP GPTA F LS +V+R DI + G + P LV +
Sbjct: 130 QVTDVILLSEYRGQPDGLVVCHLPLGPTAFFSLSNVVMRHDIVDTDLGTVSEANPHLVFD 189
Query: 236 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
NF ++LG RV +++ LFP SP+ +R++TF N D I FRHH
Sbjct: 190 NFESKLGWRVKNILKYLFP-SPKPDSKRIITFSNHADIISFRHH 232
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 387
L E GPRF +KL ++ GT + + EWV +P M+T+ +R
Sbjct: 246 LIEMGPRFDMKLYQIRLGTIEQSHADNEWVLRPYMNTAHKR 286
>gi|449515363|ref|XP_004164719.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Cucumis sativus]
Length = 199
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKILITT R S F EL V PN+ RG + +IIE + +FT +I+VH +
Sbjct: 46 PKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEH 105
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN---HGNPTGHIPELVLNNFATRLGHRV 245
R PD L+I LP GPTA+F L +V R +I++ G P ++LNNF T+LG R
Sbjct: 106 RGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHIILNNFTTKLGERT 165
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
+++ LFP P+ +RVVTF NQ D+I FR
Sbjct: 166 ANILKHLFP-VPKPDTKRVVTFANQSDYISFR 196
>gi|221054700|ref|XP_002258489.1| hypothetical protein, conserved [Plasmodium knowlesi strain H]
gi|193808558|emb|CAQ39261.1| hypothetical protein, conserved [Plasmodium knowlesi strain H]
Length = 328
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 122/241 (50%), Gaps = 7/241 (2%)
Query: 42 KNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDET 101
KNK KR+A+ K +K + L+ + E + + P + PR+IE DE
Sbjct: 39 KNKNKRNALKGKAYVKKLI-----LRKQKKDEIKKKKSLNIPVEKKIPRSIERLAIFDEN 93
Query: 102 VCRPDDDELFAGND-ADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
++++ DEFS KQG P I+IT+ + S F+ EL P+ Y
Sbjct: 94 KINAENEKFLLNEKCIDEFSDYFKQGKEPNIVITSIKRPSKNTILFMKELSLTFPHIFYE 153
Query: 161 KRGTYDLKKIIEYAKKKDFTSIIVVHTN-RREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
R + ++ ++ + + +F++ I++ + P + I LP+GPTA + L+ ++
Sbjct: 154 PRLDHSIEFLMSNSVQNNFSTFILIEEGIDKHPKYMFISTLPNGPTAKYSLTNVLYAHKK 213
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
K T PE+ + NF T +G R+ R + +L P P ++ ++VV F+NQRDFIFFRH
Sbjct: 214 KTDIEITTLPPEVYITNFNTFIGERIKRQLHTLVPFKPAYKSQKVVVFYNQRDFIFFRHF 273
Query: 280 R 280
+
Sbjct: 274 K 274
>gi|406603305|emb|CCH45184.1| Ribosome production factor 1 [Wickerhamomyces ciferrii]
Length = 288
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 101/184 (54%), Gaps = 4/184 (2%)
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DE++ + +++ ++ +FS I++ PK++ITT R S+R F E+ + PNS
Sbjct: 58 DESIQKNSENDEGIDDEYSQFSGIVE----PKLIITTSRDPSSRLLQFSKEIKLIFPNSI 113
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
RG Y + ++ A+ + + +I++H +R P ++ I P GPTA F L +VLR D
Sbjct: 114 RLNRGNYIVPNLVTAAQNSNTSDLILLHEHRGVPTSMTISHFPHGPTAFFTLHNVVLRHD 173
Query: 219 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
+ GN + P L+ NF ++LG RV +++ LFP + RV+TF N DFI R
Sbjct: 174 MPQTGNQSEAYPHLIFENFTSKLGERVVTILKHLFPPGVKKDSPRVITFKNDGDFISVRQ 233
Query: 279 HRCV 282
H V
Sbjct: 234 HLYV 237
>gi|366995525|ref|XP_003677526.1| hypothetical protein NCAS_0G02870 [Naumovozyma castellii CBS 4309]
gi|342303395|emb|CCC71174.1| hypothetical protein NCAS_0G02870 [Naumovozyma castellii CBS 4309]
Length = 286
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 84/156 (53%)
Query: 127 CAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVH 186
P+I++TT R S R F E+ + P + RG Y + ++ K + ++V+H
Sbjct: 80 VEPRIIVTTSRDPSTRLSQFAKEIKLLFPQAVRLNRGNYVMPNLVSACIKSGTSDLVVLH 139
Query: 187 TNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVG 246
+R P +L I P GPTA+F L +VLR DI N GN + P L+ +NF T LG RV
Sbjct: 140 EHRGVPTSLTISHFPHGPTAYFSLHNVVLRHDILNSGNQSEVNPHLIFDNFTTELGQRVV 199
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
++Q LF P+ RV+TF N+ DFI R H V
Sbjct: 200 TILQHLFSPGPKKDAARVITFANRGDFISVRQHVYV 235
>gi|68483743|ref|XP_714230.1| likely U3 snoRNP ribosomal biogenesis factor IMP4p [Candida
albicans SC5314]
gi|68483830|ref|XP_714190.1| likely U3 snoRNP ribosomal biogenesis factor IMP4p [Candida
albicans SC5314]
gi|46435731|gb|EAK95107.1| likely U3 snoRNP ribosomal biogenesis factor IMP4p [Candida
albicans SC5314]
gi|46435778|gb|EAK95153.1| likely U3 snoRNP ribosomal biogenesis factor IMP4p [Candida
albicans SC5314]
gi|238880200|gb|EEQ43838.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Candida albicans
WO-1]
Length = 283
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 117/274 (42%), Gaps = 58/274 (21%)
Query: 117 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
DE+S L PK++ITT R S + F E+ + PNS RG Y + ++ +
Sbjct: 68 DEYSR-LSGISDPKVVITTSRDPSVKLLQFSKEIKLMFPNSLKLNRGNYIISDLVSTCNR 126
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 236
+ +I++H +R P +L + P GPTA F L + LR D+ N GN + P L+ N
Sbjct: 127 VQVSDMILLHEHRGVPSSLTVSHFPHGPTAIFTLHNVKLRHDLPNLGNVSESYPHLIFEN 186
Query: 237 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILC 296
F + LG RV +++Q LFP + RV+TF N D+I RHH V
Sbjct: 187 FQSDLGKRVVKILQHLFPPGVKKDSSRVITFVNNDDYISVRHHVYV-------------- 232
Query: 297 SYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 356
K KD+ L E GPRF +
Sbjct: 233 --------------------------------KTKDS-----------VELSEIGPRFEM 249
Query: 357 KLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+L ++ G D K + EW + + T+ R+ +L
Sbjct: 250 RLYEIRLGLPDNKDADVEWQMRRFIRTANRKNYL 283
>gi|241959158|ref|XP_002422298.1| U3 small nucleolar ribonucleoprotein, putative; U3 snoRNP protein,
putative [Candida dubliniensis CD36]
gi|223645643|emb|CAX40304.1| U3 small nucleolar ribonucleoprotein, putative [Candida
dubliniensis CD36]
Length = 283
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 117/274 (42%), Gaps = 58/274 (21%)
Query: 117 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
DE+S L PK++ITT R S + F E+ + PNS RG Y + ++ +
Sbjct: 68 DEYSR-LSGISDPKVVITTSRDPSVKLLQFSKEIKLMFPNSLKLNRGNYIISDLVSTCNR 126
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 236
+ +I++H +R P ++ + P GPTA F L + LR D+ N GN + P L+ N
Sbjct: 127 VQVSDMIILHEHRGVPSSITVSHFPHGPTAIFTLHNVKLRHDLPNLGNVSESYPHLIFEN 186
Query: 237 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILC 296
F + LG RV +++Q LFP + RV+TF N D+I RHH V
Sbjct: 187 FQSDLGKRVVKILQHLFPPGVKKDSSRVITFVNNDDYISVRHHVYV-------------- 232
Query: 297 SYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 356
K KD+ L E GPRF +
Sbjct: 233 --------------------------------KTKDS-----------VELSEIGPRFEM 249
Query: 357 KLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+L ++ G D K + EW + + T+ R+ +L
Sbjct: 250 RLYEIRLGLPDNKDADVEWQMRRFIRTANRKNYL 283
>gi|336469951|gb|EGO58113.1| hypothetical protein NEUTE1DRAFT_122405 [Neurospora tetrasperma
FGSC 2508]
gi|350290364|gb|EGZ71578.1| Brix-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 417
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 124/277 (44%), Gaps = 63/277 (22%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKIL+TT + A ++ ++ PNS Y +R Y +++I ++AK + +T +
Sbjct: 189 PKILVTTHLNGTIHKEA--EDIAAIFPNSTYIRRSAHAYGHKYSVREIAKFAKNRGYTIL 246
Query: 183 IVVHTNRREPDALLIIGL-----PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNF 237
++V + ++P +L +I L GP+ + + + K + HGNPT H
Sbjct: 247 MIVGEDLKKPSSLTVIHLNGEDVAPGPSLTYTIRNYLPGKALLGHGNPTNHY-------- 298
Query: 238 ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCS 297
T LG + + ++FP PE GR+VVT HNQRD+IFFR HR
Sbjct: 299 -TPLGILAAKSMHTMFPPRPELSGRQVVTLHNQRDYIFFRRHR----------------- 340
Query: 298 YLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 357
+ + E R T E A GK E Q + LQE GPRFTLK
Sbjct: 341 --------YVFREAR----TTEKNVVTAEGK-------EMEGMQGIRAGLQEIGPRFTLK 381
Query: 358 LVSLQHGTFDTKGGEFE----WVHKPEMDTSRRRFFL 390
L + G G E E W K +M+ R RF L
Sbjct: 382 LRRVDKG-IGRAGSEGEDALKWEWKAKMEKVRTRFNL 417
>gi|449018591|dbj|BAM81993.1| probable U3 snoRNP component Imp4p [Cyanidioschyzon merolae strain
10D]
Length = 344
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 134/288 (46%), Gaps = 49/288 (17%)
Query: 117 DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 175
DE+++ G A PKI+ITT R S+R F E+ + PN+ RG LK +IE +
Sbjct: 84 DEYAT---AGVADPKIVITTSRNPSSRLCQFAKEVRFLFPNAQRLNRGNLILKDLIELGR 140
Query: 176 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI------KNHGNPTGHI 229
+ T ++++H R EPDAL++ LP GPTA+F LS +V+R D+ ++ +P +
Sbjct: 141 AQQLTDLVLLHETRGEPDALIVCHLPLGPTAYFALSNVVMRHDVAEMLRHEHQNSPDAAL 200
Query: 230 PEL------VL--NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQ--RDFIFFRHH 279
P L V+ +F +RLG RV +++ LFP P+ +R+V F ++ + FRH+
Sbjct: 201 PPLSEAYPHVIFEGSFQSRLGMRVKNMLRFLFP-VPKPDSKRIVAFIDKGYDGILSFRHY 259
Query: 280 RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS 339
E R +S + G + + +
Sbjct: 260 ----------------------------IVERRRTAAADDSSDDEEAGTATASSSAGRIQ 291
Query: 340 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 387
+ L E GPRF L L ++ GT + + + EW P ++R+R
Sbjct: 292 GHQQHQALIELGPRFDLGLFRIRLGTLEQQDADDEWRLAPYTRSARKR 339
>gi|356605810|gb|AET24964.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 6 KK-2011]
Length = 180
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 89/149 (59%), Gaps = 1/149 (0%)
Query: 131 ILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR 190
++ITT S+R F E+ +IPNS RG YD+K++++ + +D T +IV+ R
Sbjct: 1 VVITTSHDPSSRLKVFSKEMRLMIPNSQRINRGHYDVKQLVQACRAQDTTDLIVLTETRG 60
Query: 191 EPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQ 250
PD +++ LP GPTA F ++ +V+R DI N G + P L+ N ++LG R +++
Sbjct: 61 NPDGMIVCHLPFGPTAFFTMNNVVMRHDIPNSGTMSEQYPHLIFNKLDSKLGIRFMTILK 120
Query: 251 SLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
LFP P+ +RV+TF N D+I +RHH
Sbjct: 121 HLFP-VPKPDSKRVMTFANTNDYISYRHH 148
>gi|119576018|gb|EAW55614.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast),
isoform CRA_b [Homo sapiens]
Length = 315
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 90/153 (58%), Gaps = 3/153 (1%)
Query: 129 PKILITTCRFNSNRGPAF--ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVH 186
PK++ITT R S+R F + EL V P + RG +++ ++ K T ++VVH
Sbjct: 105 PKVMITTSRDPSSRLKMFAKVLELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVH 164
Query: 187 TNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVG 246
+R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV
Sbjct: 165 EHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVS 224
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 225 DILRYLFP-VPKDDSHRVITFANQDDYISFRHH 256
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 268 LTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 312
>gi|159480566|ref|XP_001698353.1| hypothetical protein CHLREDRAFT_127225 [Chlamydomonas reinhardtii]
gi|158282093|gb|EDP07846.1| predicted protein [Chlamydomonas reinhardtii]
Length = 286
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 110/215 (51%), Gaps = 25/215 (11%)
Query: 74 KRALELGEEPPARMTPRTIENTRE---PDETVCRPD---DDELFAGNDADEFSSILKQGC 127
++ALE G+ P + E RE D+ P DDE + D
Sbjct: 33 RKALEEGKPIPTELRKDESELRREIELEDDNTAVPRTHVDDEYAHAGETD---------- 82
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHT 187
PK+L+TT R S+R F E+ VIPNS RG LK+++ FTS+
Sbjct: 83 -PKVLVTTSRDPSSRLTQFAKEMKLVIPNSQRINRGGLILKELVRTRAVCVFTSV----E 137
Query: 188 NRREPDALLIIGLPDGPTAHFKLSKLVLRKDI---KNHGNPTGHIPELVLNNFATRLGHR 244
+R EPD +++ LP GPTA+F + VLR DI K G + P LVL+N ++LG R
Sbjct: 138 HRGEPDGMVVCHLPYGPTAYFGIFNTVLRHDIGQKKEVGTISEAYPHLVLDNLGSKLGAR 197
Query: 245 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ LFP P+ +R+VTF N++D+I FRHH
Sbjct: 198 TANILKHLFP-VPKDDAKRIVTFSNRQDYISFRHH 231
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRR 386
L ECGPRF LKL ++ GT D E EWV + ++R
Sbjct: 244 LTECGPRFELKLYQIKLGTLDQSHAENEWVLRAYTRNTKR 283
>gi|343428302|emb|CBQ71832.1| probable IMP4-component of the U3 small nucleolar ribonucleoprotein
[Sporisorium reilianum SRZ2]
Length = 289
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 98/185 (52%), Gaps = 13/185 (7%)
Query: 107 DDELFAGNDA------DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHY 159
D L A DA DE+S + G P++L+TT R S+R F E+ + PNS
Sbjct: 57 DLNLDAAQDAPSTSIDDEYS---RAGTYDPRVLVTTSRDPSSRLTQFAKEVRLLFPNSTR 113
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
RG Y + + A+ T +IV+H +R PDA+++ P GPT F L +VLR ++
Sbjct: 114 LNRGGYTVSDLAAAARSNGITDMIVLHEHRGVPDAMVVSHFPHGPTLLFTLHNVVLRHEV 173
Query: 220 KNHGNPT--GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 277
H N T P L+ NF ++LG RV ++ LFP P+ +R +++ NQ DFI FR
Sbjct: 174 SAHANSTVSEQYPHLIFENFNSKLGTRVMTALKHLFP-VPKDDSKRTMSWINQNDFISFR 232
Query: 278 HHRCV 282
HH V
Sbjct: 233 HHVFV 237
>gi|302693983|ref|XP_003036670.1| hypothetical protein SCHCODRAFT_46039 [Schizophyllum commune H4-8]
gi|300110367|gb|EFJ01768.1| hypothetical protein SCHCODRAFT_46039, partial [Schizophyllum
commune H4-8]
Length = 307
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 95/157 (60%), Gaps = 4/157 (2%)
Query: 129 PKILITT-CRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHT 187
P+I+IT R +S + E+ V PN+H RG Y +K++ + + D T +IV+H
Sbjct: 81 PEIVITHFSRSSSEVLQSRRWEMRLVFPNAHRINRGNYVVKELADACRANDVTDLIVLHE 140
Query: 188 NRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRV 245
+R PDA+++ P GPT F L+ ++LR DI ++ T P L+ +NF+++LGHR+
Sbjct: 141 HRGVPDAMIVSHFPHGPTVFFTLNNVLLRHDIASYKESTVSEQYPHLIFDNFSSQLGHRI 200
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
+++ LFP P+ +RV+TF N+ DFI FRHH V
Sbjct: 201 RDVLKYLFP-VPKEDSKRVMTFANEDDFIAFRHHVFV 236
>gi|20381023|gb|AAH28802.1| Bxdc5 protein, partial [Mus musculus]
Length = 106
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 79/156 (50%), Gaps = 56/156 (35%)
Query: 233 VLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMW 292
+LNNF TRLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR H
Sbjct: 1 ILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFH------------- 47
Query: 293 TILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGP 352
RYIF++++ G +QE GP
Sbjct: 48 -------------------RYIFKSEKKVG------------------------IQELGP 64
Query: 353 RFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 388
RFTLKL SLQ GTFD+K GE+EWVHK S+ F
Sbjct: 65 RFTLKLRSLQKGTFDSKYGEYEWVHKVCAYCSKAHF 100
>gi|156846454|ref|XP_001646114.1| hypothetical protein Kpol_1039p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156116787|gb|EDO18256.1| hypothetical protein Kpol_1039p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 288
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 60/275 (21%)
Query: 117 DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 175
DE+++ G + P++++TT R S R F E+ + P + RG Y + +++
Sbjct: 73 DEYAA--SSGISDPRVIVTTSRDPSTRLSQFAKEIKLLFPGAVRLNRGNYIMPNLVKACV 130
Query: 176 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLN 235
+ + ++V+H +R P ++ I P GPTA F L +VLR DI N GN + P L+ +
Sbjct: 131 RSGTSDLVVLHEHRGVPTSITISHFPHGPTAFFTLHNVVLRHDILNRGNQSEVNPHLIFD 190
Query: 236 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTIL 295
NF T LG R+ ++++ LFP P+ RV+TF N+ D+I R H
Sbjct: 191 NFTTPLGERIVKVLKHLFPPGPKKDASRVITFANRGDYISVRQH---------------- 234
Query: 296 CSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 355
Y + R E E GPRF
Sbjct: 235 -----------VYVKTREGVEVAE------------------------------VGPRFE 253
Query: 356 LKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
++L L+ GT + K + EW + + T+ R+ +L
Sbjct: 254 MRLFELRLGTLENKDADVEWKLRRFVRTAGRKDYL 288
>gi|195107106|ref|XP_001998157.1| GI16926 [Drosophila mojavensis]
gi|193914751|gb|EDW13618.1| GI16926 [Drosophila mojavensis]
Length = 218
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 90/152 (59%), Gaps = 1/152 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI++TT S+R F+ EL + PN+ RG Y LK ++ + + T I+VH +
Sbjct: 2 PKIMLTTSHEPSSRLKMFMKELRLIFPNAQQMNRGKYQLKTLMHACRANNVTDFILVHEH 61
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD+L+I LP GPTA F ++ + +R DI N G + P L+ +NF + +G R ++
Sbjct: 62 RGIPDSLVICHLPFGPTAFFNITDVTMRHDIPNLGPMSEQKPHLIFSNFKSNIGLRTVQI 121
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHR 280
++ LFP P+ + R+++F N D I FRHH+
Sbjct: 122 LKHLFP-VPKDKSERIISFINNEDKISFRHHQ 152
>gi|356605824|gb|AET24971.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 9 KK-2011]
Length = 176
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 86/145 (59%), Gaps = 1/145 (0%)
Query: 135 TCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDA 194
T R S+R F E+ + PN+ RG YD+K++++ K +D T +I++ R PD
Sbjct: 1 TSRDPSSRLKMFSKEMKLIFPNAQRINRGHYDVKQVVQACKAQDSTDLIILTETRGNPDG 60
Query: 195 LLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP 254
+++ LP GPTA F ++ +V+R DI N G + P L+ +N ++LG R +++ LFP
Sbjct: 61 MIVCHLPFGPTAFFTMANVVMRHDIPNCGTMSEQYPHLIFDNLNSKLGQRFTTILKHLFP 120
Query: 255 QSPEFRGRRVVTFHNQRDFIFFRHH 279
P+ +R++TF N DF+ FRHH
Sbjct: 121 -VPKPDSKRIMTFSNVDDFVSFRHH 144
>gi|358056728|dbj|GAA97391.1| hypothetical protein E5Q_04069 [Mixia osmundae IAM 14324]
Length = 365
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 90/153 (58%), Gaps = 3/153 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P I++TT R S+R F E+ V+PN+H RG ++++ E + + T ++V+H +
Sbjct: 159 PNIVVTTSRDPSSRLAQFAKEMRLVLPNAHRLNRGNAVMRELAEACRANNVTDLVVLHEH 218
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG--HIPELVLNNFATRLGHRVG 246
R PDA+++ P GPT F L +VLR D + T P L+ +NF+++LG+R+
Sbjct: 219 RGVPDAMIVSHFPHGPTTLFTLHNVVLRHDTTSFSTSTVSEQYPHLIFDNFSSKLGNRIQ 278
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ LFP P+ R +TF N+ DFI FRHH
Sbjct: 279 SVLKHLFP-VPKPDATRTMTFANEGDFISFRHH 310
>gi|356605800|gb|AET24959.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 19 KK-2011]
Length = 175
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 83/140 (59%), Gaps = 1/140 (0%)
Query: 140 SNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIG 199
S+R F E+ + PN+ RG YD+K++++ K +D T +I++ R PD +++
Sbjct: 6 SSRLKMFSKEMKLIFPNAQRINRGHYDVKQVVQACKAQDSTDLIILTETRGNPDGMIVCH 65
Query: 200 LPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEF 259
LP GPTA F ++ V+R DI N G + P L+ +N ++LG R +++ LFP P+
Sbjct: 66 LPFGPTAFFSMANTVMRHDIPNCGTMSEQYPHLIFDNLNSKLGVRFQTILKHLFP-VPKS 124
Query: 260 RGRRVVTFHNQRDFIFFRHH 279
+RV+TF N DFI FRHH
Sbjct: 125 DSKRVITFSNSDDFISFRHH 144
>gi|449017453|dbj|BAM80855.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 297
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 146/320 (45%), Gaps = 60/320 (18%)
Query: 74 KRALELGEEPPARMTPRTIENTREPDETVCRPD-DDELFAGNDADEFSSILKQGCAPKIL 132
+RAL+ GEEP R PRT+E+TR V RP+ D E ++ ++L+ P++L
Sbjct: 35 QRALQ-GEEPLQR--PRTLESTR-----VYRPELDWEQEPPFGEEDIRAVLRGERRPRVL 86
Query: 133 ITTCRFNSNRGPA-FISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSI-IVVHTNRR 190
+TT + R I +LL + P S Y +R L+++ + + FT + ++V
Sbjct: 87 LTTSVQPTGRQIYDLIGDLLFLFPGSVYRERDQRTLEELCKAGIDQGFTDLWVIVQGKGL 146
Query: 191 EPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQ 250
L + LPDGP ++LS +V + I + G PT E+V NF T LG + R +
Sbjct: 147 SLRYLQHVRLPDGPVYLYRLSSVVCSESIPHRGTPTPLPVEVVTCNFQTNLGRHIERSLS 206
Query: 251 SLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYE 310
+LFP + R+VV NQRD+IF R +
Sbjct: 207 ALFPHEGTPQSRQVVLVRNQRDYIFLRFY------------------------------- 235
Query: 311 CRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG 370
RYIFE A + + ++V R QE GPRFTLKL+S+++ D
Sbjct: 236 -RYIFE----------------ASRDPEAAERVRVRTQELGPRFTLKLLSVRY-PIDRSR 277
Query: 371 GEFEWVHKPEMDTSRRRFFL 390
F W ++T +R F L
Sbjct: 278 VAFSWRRSRVVNTGKRVFAL 297
>gi|299747504|ref|XP_002911179.1| brix domain-containing protein [Coprinopsis cinerea okayama7#130]
gi|298407549|gb|EFI27685.1| brix domain-containing protein [Coprinopsis cinerea okayama7#130]
Length = 202
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 82/132 (62%), Gaps = 3/132 (2%)
Query: 153 VIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSK 212
V PNSH RG Y +K++ + + D T +IV+H +R PDA+++ P GPT +F L+
Sbjct: 4 VFPNSHRVNRGNYVVKELADACRANDVTDLIVLHEHRGVPDAMIVSHFPHGPTVYFTLNN 63
Query: 213 LVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQ 270
+ LR DI ++ N T P L+ NF+++LG RV +++ LFP P+ +RV+TF N+
Sbjct: 64 VTLRHDITSYKNSTVSEQYPHLIFENFSSKLGERVRDVLKYLFP-VPKEDSKRVMTFANE 122
Query: 271 RDFIFFRHHRCV 282
DFI FRHH V
Sbjct: 123 SDFISFRHHVFV 134
>gi|410083415|ref|XP_003959285.1| hypothetical protein KAFR_0J00820 [Kazachstania africana CBS 2517]
gi|372465876|emb|CCF60150.1| hypothetical protein KAFR_0J00820 [Kazachstania africana CBS 2517]
Length = 285
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 112/262 (42%), Gaps = 57/262 (21%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P+I+ITT R S R F E+ + P + RG + ++ A K + I+++H +
Sbjct: 81 PRIVITTSRDPSTRLSQFAKEIKLMFPEATRLNRGNLIMSNLVSAAIKSGTSDIVLLHEH 140
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P +L + LP GPTA F L +VLR DI N GN + P L+ + F T+LG RV +
Sbjct: 141 RGVPTSLTVSHLPHGPTAFFSLHNVVLRHDILNSGNVSEVNPHLIFDGFTTKLGERVVSI 200
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCY 308
++ LF P+ RV+TF N+ D FIS + Y
Sbjct: 201 LKHLFAPGPKKDSERVMTFANRGD-------------FISV--------------RQHVY 233
Query: 309 YECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT 368
R E L E GPRF +KL L+ GT D
Sbjct: 234 VRTRDGVE------------------------------LAEVGPRFEMKLFELRLGTLDN 263
Query: 369 KGGEFEWVHKPEMDTSRRRFFL 390
K + EW + + T+ R+ +L
Sbjct: 264 KDADIEWQLRRFVRTANRKDYL 285
>gi|407927467|gb|EKG20359.1| Anticodon-binding protein [Macrophomina phaseolina MS6]
Length = 298
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 94/187 (50%), Gaps = 7/187 (3%)
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
D D+ + L P++L+TT R S R AF E+ ++P S RG L I+ A
Sbjct: 72 DLDDEYAQLSGVVDPRVLVTTSRDPSTRLGAFAKEVRLLLPTSIRVNRGNLVLPNIVSSA 131
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 232
K + ++++H +R P A+ + P GPTA F L +VLR DI N G + P L
Sbjct: 132 KAAGLSDVVLLHEHRGTPTAMTVSHFPHGPTASFSLHNVVLRHDIPNAARGTVSESYPHL 191
Query: 233 VLNNFATRLGHRVGRLIQSLFPQSPEFR-----GRRVVTFHNQRDFIFFRHHRCVPLEFI 287
+ F+T LG RV +++Q LFP P G RVVTF N+ D I RHH V +
Sbjct: 192 IFEGFSTNLGKRVVKILQHLFPPRPAALTTKDVGNRVVTFVNREDSIEVRHHVFVRTGYQ 251
Query: 288 SCYMWTI 294
S + +
Sbjct: 252 SVELAEV 258
>gi|156097436|ref|XP_001614751.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803625|gb|EDL45024.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 328
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 124/242 (51%), Gaps = 9/242 (3%)
Query: 42 KNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDET 101
KNK KR+A+ K +K + L+ + E + + P + PR+IE DE
Sbjct: 39 KNKNKRNALKGKAYVKKLI-----LRKQKKDEIKKKKSLNIPVEKKIPRSIERLAIFDEN 93
Query: 102 VCRPDDDELFAGND--ADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
+++E F N+ DEFS KQ P I+IT+ + S F+ EL P+ Y
Sbjct: 94 KIN-EENEKFLLNEKCIDEFSDYFKQRKEPNIVITSIKRPSKNTILFMKELSLTFPHIFY 152
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTN-RREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
R + ++ ++ + + +F++ I++ + P + I LP+GPTA + L+ ++
Sbjct: 153 EPRLDHSIEFLMSNSVQNNFSTFILIEEGIDKHPKYMFISTLPNGPTAKYSLTNVLYAHK 212
Query: 219 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
K T PE+ + NF T +G R+ R + +L P P ++ ++VV F+NQRDFIFFRH
Sbjct: 213 KKTDIEITTLPPEVYITNFNTFIGERIKRQLHTLVPFKPAYKSQKVVVFYNQRDFIFFRH 272
Query: 279 HR 280
+
Sbjct: 273 FK 274
>gi|240277172|gb|EER40681.1| U3 small nucleolar ribonucleoprotein IMP4 [Ajellomyces capsulatus
H143]
gi|325093994|gb|EGC47304.1| U3 small nucleolar ribonucleoprotein IMP4 [Ajellomyces capsulatus
H88]
Length = 324
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 133/269 (49%), Gaps = 20/269 (7%)
Query: 38 PSMIKNKEKRSAVHAK---LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIEN 94
P + +E+R ++ K L+ EKR KLKA A+ KR LE P+ +T+
Sbjct: 23 PKRRQARERRDYLYRKALLLRDASVAEKRAKLKASLASGKR-LE-----PSVANDKTLRE 76
Query: 95 TREPDETVC----RPDDDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISE 149
+ DE++ +P+ + + DE+ +L G P+ LITT R S R F E
Sbjct: 77 DFKYDESLPTHSKQPNSKDSDMLDLDDEY--VLTSGIVDPRPLITTSRSPSTRLSTFAKE 134
Query: 150 LLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFK 209
+ +IP S RG + ++ AK + +I++H +R P A+ + LP GPTA F
Sbjct: 135 MRLLIPTSIRINRGNIVIPDLVASAKTSALSDMIILHEHRGTPTAITVSHLPHGPTASFS 194
Query: 210 LSKLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVV 265
L ++LR DI N G + P L+ F T+LG RV ++++ +FP ++ G RVV
Sbjct: 195 LHNVMLRADIPNSARGTVSESYPHLIFEGFTTKLGARVVKILKHIFPPREANGKLGSRVV 254
Query: 266 TFHNQRDFIFFRHHRCVPLEFISCYMWTI 294
TF N D I RHH V + S + +
Sbjct: 255 TFKNIEDSIEVRHHVFVKTGYQSVELAEV 283
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 390
KT Q V L E GPR T++L ++ GT + GGE EW TSR++ +L
Sbjct: 272 KTGYQSV--ELAEVGPRMTMRLFQIRGGTLEKDSGGEIEWSLNQYTRTSRKKDYL 324
>gi|150866341|ref|XP_001385902.2| hypothetical protein PICST_90419 [Scheffersomyces stipitis CBS
6054]
gi|149387597|gb|ABN67873.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 283
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 119/275 (43%), Gaps = 60/275 (21%)
Query: 117 DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 175
DE+S++ G A PK++ITT R S + F E+ + PNS RG Y + ++++
Sbjct: 68 DEYSTL--SGIADPKVIITTSRDPSVKLLQFSKEVKLMFPNSLKLNRGNYVIPELVKTCS 125
Query: 176 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLN 235
+ + +I++H +R P +L + P GP+A F L + LR D+ GN + P L+
Sbjct: 126 RVQISDLIILHEHRGVPTSLTVSHFPHGPSAIFTLHNVKLRHDLPQLGNVSESYPHLIFE 185
Query: 236 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTIL 295
NF T LG RV +++ LFP + RV+TF N D+I RHH V
Sbjct: 186 NFTTGLGKRVETILKHLFPPGVKKDSSRVITFVNNDDYISVRHHVYV------------- 232
Query: 296 CSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 355
K KD L E GPRF
Sbjct: 233 ---------------------------------KTKDG-----------VELSEIGPRFE 248
Query: 356 LKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
++L ++ G D K + EW + + T+ R+ +L
Sbjct: 249 MRLYEIRLGLPDNKNADVEWQLRRFIRTANRKNYL 283
>gi|390342557|ref|XP_797223.3| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Strongylocentrotus purpuratus]
Length = 206
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 80/133 (60%), Gaps = 1/133 (0%)
Query: 147 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 206
+ EL ++PN+ RG Y++ ++++ + D T +I+VH +R PDAL I LP GPTA
Sbjct: 16 LCELKLILPNAQRLNRGNYEISQLVQACRANDVTDLIMVHEHRGVPDALQICHLPYGPTA 75
Query: 207 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 266
F L VLR DI G + P L+ NNF ++LG RV +++ LFP P+ +RV+T
Sbjct: 76 FFTLFNPVLRHDIPKIGTMSEAYPHLIFNNFKSKLGERVMSILKYLFP-VPKPYSKRVIT 134
Query: 267 FHNQRDFIFFRHH 279
F N D I FRHH
Sbjct: 135 FANDDDSISFRHH 147
>gi|363736931|ref|XP_003641776.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Gallus gallus]
Length = 290
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 85/151 (56%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+++TT R S R F EL VIP + RG ++ ++ + T ++VVH
Sbjct: 83 PKVMVTTSRDPSARLRVFAKELCLVIPGARRLNRGRAEVGALVSACRAAGVTDLLVVHET 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R +PD L++ LP GPTAHF LS VLR ++ G P ++L+ + LG RVG +
Sbjct: 143 RGQPDGLVLCHLPHGPTAHFTLSGAVLRHEVGGLGGAPLGAPHILLHRLDSALGRRVGTI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P + RRVVTF N+ D I R+H
Sbjct: 203 LKHLFP-VPRPQTRRVVTFANEDDVILVRNH 232
>gi|356605806|gb|AET24962.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 15 KK-2011]
Length = 179
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 84/140 (60%), Gaps = 1/140 (0%)
Query: 140 SNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIG 199
S+R F E+ + PN+ RG YD+K++++ K +D T +I++ R PD +++
Sbjct: 3 SSRLKMFSKEMKLIFPNAQRINRGHYDVKQVVQACKAQDSTDLIILTETRGNPDGMIVCH 62
Query: 200 LPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEF 259
LP GPTA F ++ +V+R DI N G + P L+ +N ++LG R +++ LFP P+
Sbjct: 63 LPFGPTAFFSMANVVMRHDIPNCGTMSEQYPHLIFDNLNSKLGLRFTTILKHLFP-VPKP 121
Query: 260 RGRRVVTFHNQRDFIFFRHH 279
+R++TF N DF+ FRHH
Sbjct: 122 DSKRIITFANSDDFLSFRHH 141
>gi|339238423|ref|XP_003380766.1| U3 small nucleolar ribonucleoprotein IMP4 [Trichinella spiralis]
gi|316976305|gb|EFV59625.1| U3 small nucleolar ribonucleoprotein IMP4 [Trichinella spiralis]
Length = 520
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 117/245 (47%), Gaps = 39/245 (15%)
Query: 56 HQKKVE-KRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPD------ETVCRPDDD 108
++K +E K + ++ + K+A++ GE P + IE ++ + E + DD
Sbjct: 14 YRKSIEAKERAIQEKKERIKKAIDEGERIPTDLQKEAIELQKQSEWLDEGGEGIVSHVDD 73
Query: 109 ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF--------------ISELLSVI 154
E D PKI+ITT S++ F EL +
Sbjct: 74 EYRWSGVTD-----------PKIVITTSHDPSSKLKQFAKLLLHHLLLVLGPFQELKILF 122
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
PN RG Y++KK+++ + D T I+V +R PD + I LP GPTA+F LS +V
Sbjct: 123 PNCQRINRGQYEMKKLVDACRANDVTDFILVQEHRGVPDGITICHLPFGPTAYFTLSNVV 182
Query: 215 LRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFI 274
+R D+ + G + P L+ +NF ++LG R LFP P+ RRVVTF + DFI
Sbjct: 183 MRHDVPDVGKMSEQYPHLIFHNFTSQLGKR------HLFP-VPKEDSRRVVTFSVEDDFI 235
Query: 275 FFRHH 279
FRHH
Sbjct: 236 SFRHH 240
>gi|225558218|gb|EEH06502.1| U3 small nucleolar ribonucleoprotein IMP4 [Ajellomyces capsulatus
G186AR]
Length = 324
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 133/269 (49%), Gaps = 20/269 (7%)
Query: 38 PSMIKNKEKRSAVHAK---LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIEN 94
P + +E+R ++ K L+ EKR KLKA A+ KR LE P+ +T+
Sbjct: 23 PKRRQARERRDYLYRKALLLRDASVAEKRAKLKASLASGKR-LE-----PSVANDKTLRE 76
Query: 95 TREPDETVC----RPDDDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISE 149
+ DE++ +P+ + + DE+ +L G P+ LITT R S R F E
Sbjct: 77 DFKYDESLPTHSKQPNSKDSDMLDLDDEY--VLTSGIVDPRPLITTSRSPSTRLSTFAKE 134
Query: 150 LLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFK 209
+ +IP S RG + ++ AK + +I++H +R P A+ + LP GPTA F
Sbjct: 135 MRLLIPTSIRINRGNIVIPDLLASAKTSALSDMIILHEHRGTPTAITVSHLPHGPTASFS 194
Query: 210 LSKLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVV 265
L ++LR DI N G + P L+ F T+LG RV ++++ +FP ++ G RVV
Sbjct: 195 LHNVMLRADIPNSARGTVSESYPHLIFEGFTTKLGARVVKILKHIFPPREANGKLGSRVV 254
Query: 266 TFHNQRDFIFFRHHRCVPLEFISCYMWTI 294
TF N D I RHH V + S + +
Sbjct: 255 TFKNIEDSIEVRHHVFVKTGYQSVELAEV 283
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 390
KT Q V L E GPR T++L ++ GT + GGE EW TSR++ +L
Sbjct: 272 KTGYQSV--ELAEVGPRMTMRLFQIRGGTLEKDSGGEIEWSLNQYTRTSRKKDYL 324
>gi|367012075|ref|XP_003680538.1| hypothetical protein TDEL_0C04380 [Torulaspora delbrueckii]
gi|359748197|emb|CCE91327.1| hypothetical protein TDEL_0C04380 [Torulaspora delbrueckii]
Length = 288
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 84/154 (54%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P+I++TT R S R F E+ + P + RG Y + ++ K + ++++H +
Sbjct: 84 PRIIVTTSRDPSTRLSQFAKEIKLLFPTAVRLNRGNYIMPNLVSACVKSGTSDLVILHEH 143
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P +L + P GPTA+F L +VLR DI N GN + P ++ NF T LG RV +
Sbjct: 144 RGVPTSLTVSHFPHGPTAYFTLHNVVLRHDILNSGNQSEVNPHMIFENFTTPLGKRVESI 203
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
++ LFP P+ RV+TF N+ DFI R H V
Sbjct: 204 LKHLFPPGPKKDSPRVITFANRGDFISVRQHVYV 237
>gi|425767682|gb|EKV06248.1| Imp4 protein, putative [Penicillium digitatum PHI26]
gi|425780377|gb|EKV18384.1| Imp4 protein, putative [Penicillium digitatum Pd1]
Length = 293
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 114/228 (50%), Gaps = 10/228 (4%)
Query: 63 RKKLKARDA--AEKRALELGEEPPARMTPRTIENTRE--PDETVCRPDDDELFAGNDADE 118
R+ L RDA AEKR+ + TI N ++ D D+E + DE
Sbjct: 15 RRALLLRDASIAEKRSQLKASLASGKPLDPTIANDKKLREDFKYDESKDNEDAEMDIDDE 74
Query: 119 FSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKK 177
+ +L G P+ L+TT R S R AF E+ ++P S RGT L ++ A
Sbjct: 75 Y--VLTSGIIDPRPLVTTSRSPSARLGAFAKEIRLLLPTSIRLNRGTLVLGDLVSSATSA 132
Query: 178 DFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLN 235
T +I++H +R P AL I LP GPTA F L +VLR+DI N G + P LV
Sbjct: 133 ALTDMILLHEHRGTPTALTISHLPHGPTASFSLHNVVLRQDIPNAARGTVSESYPHLVFE 192
Query: 236 NFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRCV 282
F T+LG RV ++++ LFP + G RVVTF N+ D I RHH V
Sbjct: 193 GFKTKLGARVVQILKHLFPPRETGKVGNRVVTFVNKEDNIEVRHHVFV 240
>gi|154285818|ref|XP_001543704.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Ajellomyces
capsulatus NAm1]
gi|150407345|gb|EDN02886.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Ajellomyces
capsulatus NAm1]
Length = 315
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 120/238 (50%), Gaps = 17/238 (7%)
Query: 54 LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVC----RPDDDE 109
L+ EKR KLKA A+ KR LE P+ +T+ + DE++ +P+ +
Sbjct: 33 LRDASVAEKRAKLKASLASGKR-LE-----PSVANDKTLREDFKYDESLPTHSKQPNSKD 86
Query: 110 LFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLK 168
+ DE+ +L G P+ LITT R S R F E+ +IP S RG +
Sbjct: 87 SDMMDLDDEY--VLTSGIVDPRPLITTSRSPSTRLSTFAKEMRLLIPTSIRINRGNIVIP 144
Query: 169 KIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPT 226
++ AK + +I++H +R P A+ + LP GPTA F L ++LR DI N G +
Sbjct: 145 DLLASAKTSALSDMIILHEHRGTPTAITVSHLPHGPTASFSLHNVMLRADIPNSARGTVS 204
Query: 227 GHIPELVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
P L+ F T+LG RV ++++ +FP ++ G RVVTF N D I RHH V
Sbjct: 205 ESYPHLIFEGFTTKLGARVVKILKHIFPPREANGKLGSRVVTFKNIEDSIEVRHHVFV 262
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 390
KT Q V L E GPR T++L ++ GT + GGE EW TSR++ +L
Sbjct: 263 KTGYQSV--ELAEVGPRMTMRLFQIRGGTLEKDSGGEIEWSLNQYTRTSRKKDYL 315
>gi|356605820|gb|AET24969.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis drosophilae]
Length = 178
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Query: 132 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 191
+ITT S+R F E+ + PNS RG YD+K++++ + +D T +I+ R
Sbjct: 1 VITTSGDPSSRLKVFSKEMKLIFPNSQRINRGHYDIKQLVQACRAQDTTDLIIFTETRGN 60
Query: 192 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 251
PD +++ LP GPTA F ++ +V+R DI N G + P L+ N ++LG R +++
Sbjct: 61 PDGMIVCHLPFGPTAFFTMTNVVMRHDIPNCGTMSEQYPHLIFNKLDSKLGIRFMTILKH 120
Query: 252 LFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
LFP P+ +RV+TF N DFI +RHH
Sbjct: 121 LFP-VPKPDSKRVMTFANTDDFISYRHH 147
>gi|449303318|gb|EMC99326.1| hypothetical protein BAUCODRAFT_65326 [Baudoinia compniacensis UAMH
10762]
Length = 295
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 90/170 (52%), Gaps = 4/170 (2%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P++L+TT R S+R +F E+ ++P + RG L ++ AK + +I++H +
Sbjct: 86 PRVLVTTSRDPSSRLGSFAKEIRLLLPTAIRLNRGNLVLPNLVSSAKSSGLSDVILLHEH 145
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVG 246
R P A+ I LP GPTA F L +VLR DI N G + P L+ NF T LG RV
Sbjct: 146 RGTPTAMTISHLPHGPTASFSLHNVVLRADIPNSARGTVSESYPHLIFENFTTALGKRVV 205
Query: 247 RLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTI 294
+++Q LFP + G RVVTF N D I RHH V + S + +
Sbjct: 206 KILQHLFPPREGGTKLGSRVVTFKNIEDSIEVRHHVFVKTGYQSVELAEV 255
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
KT Q V L E GPR T++L ++ GT + K G+ EW TS+++ +L
Sbjct: 244 KTGYQSV--ELAEVGPRMTMRLFEIRQGTAENKEGDVEWALTQYTRTSKKKDYL 295
>gi|118377128|ref|XP_001021746.1| Brix domain containing protein [Tetrahymena thermophila]
gi|89303512|gb|EAS01500.1| Brix domain containing protein [Tetrahymena thermophila SB210]
Length = 289
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 86/153 (56%), Gaps = 3/153 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P ILITT R S R F EL+S PNS RG +K++ Y +K+ T ++++H +
Sbjct: 83 PMILITTSRDPSPRLVNFQKELVSFFPNSERMNRGQTVVKELSRYCIQKNVTDLVILHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPELVLNNFATRLGHRVG 246
R EPD ++I P GPT + + +VLR D+K + P L+ NNF + LG R+
Sbjct: 143 RGEPDGMIITHFPLGPTLYLGIKNVVLRHDLKTEKLDAVSKQNPHLIFNNFNSPLGERIT 202
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ LFP P+ ++V+TF N D I RHH
Sbjct: 203 SILKHLFP-VPKHDSKKVITFSNNSDLISVRHH 234
>gi|123503453|ref|XP_001328518.1| Brix domain containing protein [Trichomonas vaginalis G3]
gi|121911462|gb|EAY16295.1| Brix domain containing protein [Trichomonas vaginalis G3]
Length = 295
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 97/175 (55%), Gaps = 4/175 (2%)
Query: 106 DDDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 164
DD+E N+ D +++ G P + +TT R + F E+ +IPN+ RG
Sbjct: 61 DDNETQFQNELDNEYAMM--GVEDPLVAVTTSRDPAGPIKTFAREISQIIPNAQRINRGQ 118
Query: 165 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 224
DLK + + ++ D T +++VH +PD ++I LP GPTA+ L +V+R+D+ +
Sbjct: 119 MDLKGLADLCRQHDMTDLVIVHGTHGDPDCIVISHLPYGPTAYLSLKNVVMRRDVPDAPP 178
Query: 225 PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+ P LV + ++LG R+ ++++LFP P+ R+++F N+ D+I FR H
Sbjct: 179 LSAAFPHLVFEDMTSKLGKRITDILKALFP-VPKPESHRIISFVNRNDWISFRQH 232
>gi|358339326|dbj|GAA47412.1| U3 small nucleolar ribonucleoprotein protein IMP4, partial
[Clonorchis sinensis]
Length = 487
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 128/259 (49%), Gaps = 29/259 (11%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEK----RKKLKARDAAEKR-------ALELGEEPPAR 86
PS ++ +EK A+LK Q ++ + R+ ++ARD +R AL+ G+ P
Sbjct: 184 PSHLEKEEK-----AQLKRQARLRREFIYRRSIEARDVESQRKKDLLRTALKEGKRLPKE 238
Query: 87 MTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPA 145
+ ++ E D + DE G A E L G P++++TT R S+R
Sbjct: 239 LENNALDLNEELDWS------DEGGDGVAAAEDDEYLWAGTEDPRVVVTTSRSPSSRLKE 292
Query: 146 FISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPT 205
F EL ++PN+ RG Y K ++E K T +IVV+ R PD L I LP GPT
Sbjct: 293 FAKELRFLVPNATKINRGNYQNKDLLEACLAKQITDLIVVNETRGVPDTLTISHLPFGPT 352
Query: 206 AHFKLSKLVLRKDIKNHGNPTG-----HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR 260
A F L + R +++ G +G P + + ++LG RV +++ LFP P+
Sbjct: 353 AVFTLYNVHARHEMEAIGRGSGAKMPQAYPHHIFHGLNSKLGMRVRSILKHLFP-VPKDD 411
Query: 261 GRRVVTFHNQRDFIFFRHH 279
RRV+T++ + D I FRHH
Sbjct: 412 SRRVITWYEEDDVILFRHH 430
>gi|336373645|gb|EGO01983.1| hypothetical protein SERLA73DRAFT_120635 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386461|gb|EGO27607.1| hypothetical protein SERLADRAFT_461381 [Serpula lacrymans var.
lacrymans S7.9]
Length = 288
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 3/153 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S++ F E+ V PNS RG Y +K + E + + T +IV+H +
Sbjct: 82 PKIVITTSRDPSSKLLQFAKEIRLVFPNSSRINRGNYVMKDLAEACRANNITDLIVLHEH 141
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 246
R PDA+++ P GPT +F L + LR DI + T P L+ F ++LG R+
Sbjct: 142 RGVPDAMIVSHFPYGPTVYFTLHGVSLRHDIATFKSSTVSEQYPHLIFEKFDSKLGKRIQ 201
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ LFP + E +RV+TF N+ D I FRHH
Sbjct: 202 DVLKYLFPVAKE-DSKRVMTFSNEDDCISFRHH 233
>gi|119576017|gb|EAW55613.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast),
isoform CRA_a [Homo sapiens]
Length = 206
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Query: 132 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 191
+ITT R S+R F EL V P + RG +++ ++ K T ++VVH +R
Sbjct: 1 MITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEHRGT 60
Query: 192 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 251
P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +++
Sbjct: 61 PVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDILRY 120
Query: 252 LFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
LFP P+ RV+TF NQ D+I FRHH
Sbjct: 121 LFP-VPKDDSHRVITFANQDDYISFRHH 147
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 336 EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
+KT + V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 150 KKTDHRNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 203
>gi|255937243|ref|XP_002559648.1| Pc13g12320 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584268|emb|CAP92301.1| Pc13g12320 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 293
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 93/170 (54%), Gaps = 6/170 (3%)
Query: 117 DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 175
DE+ +L G P+ L+TT R S R AF E+ ++P S RGT L ++ A
Sbjct: 73 DEY--VLTSGIIDPRPLVTTSRSPSARLGAFAKEIRLLLPTSIRLNRGTLVLGDLVSSAT 130
Query: 176 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELV 233
T ++++H +R P AL I LP GPTA F L +VLR+DI N G + P LV
Sbjct: 131 SAALTDMVLLHEHRGTPTALTISHLPHGPTASFSLHNVVLRQDIPNAARGTVSESYPHLV 190
Query: 234 LNNFATRLGHRVGRLIQSLF-PQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
F T+LG RV ++++ LF P+ P G R+V+F N+ D I RHH V
Sbjct: 191 FEGFKTKLGARVVQILKHLFPPREPGKIGNRIVSFVNKDDNIEVRHHVFV 240
>gi|169608341|ref|XP_001797590.1| hypothetical protein SNOG_07244 [Phaeosphaeria nodorum SN15]
gi|111064775|gb|EAT85895.1| hypothetical protein SNOG_07244 [Phaeosphaeria nodorum SN15]
Length = 295
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 118/235 (50%), Gaps = 17/235 (7%)
Query: 54 LKHQKKVEKRKKLKARDAAEK-RALELGEEPPARMTPRTIENTREPDETVC-RPDDDELF 111
L+ + KR LKA A+ K A +L E+ T+ + DE+ R ++EL
Sbjct: 20 LRDAELASKRAALKASLASGKPLAKDLAEDS-------TLRTDYKYDESRADRTAEEELG 72
Query: 112 AGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII 171
++ + S ++ P+IL+TT R S+R F E+ ++P + RG L ++
Sbjct: 73 LDDEYAQLSGVVD----PRILVTTSRDPSSRLGTFAKEIRLLLPTAIRLNRGNLILNNLV 128
Query: 172 EYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHI 229
A+ + II++H +R P AL + P GPTA F L +VLR DI N G +
Sbjct: 129 SSAQSSGLSDIILLHEHRGTPTALTVSHFPHGPTASFSLHNVVLRADIPNSARGTVSESY 188
Query: 230 PELVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
P L+ F+T+LG RV ++++ LFP + G RVVTF N D I RHH V
Sbjct: 189 PHLIFEGFSTKLGERVVQVLKHLFPPREGTAKVGNRVVTFKNIEDTIEVRHHVFV 243
>gi|444322137|ref|XP_004181724.1| hypothetical protein TBLA_0G02670 [Tetrapisispora blattae CBS 6284]
gi|387514769|emb|CCH62205.1| hypothetical protein TBLA_0G02670 [Tetrapisispora blattae CBS 6284]
Length = 292
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 95/190 (50%), Gaps = 13/190 (6%)
Query: 93 ENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLS 152
ENT DE DDE A + + P+++++T R S R F E+
Sbjct: 65 ENTTNDDEDSI---DDEYSATSGIQD----------PRVIVSTSRDPSTRLSQFAKEVKL 111
Query: 153 VIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSK 212
+ P S RG Y + ++ K + + ++++H +R P +L I LP GPTA F L
Sbjct: 112 LFPTSIRLNRGNYVMSHLVAACNKSNSSDLVILHEHRGVPTSLTISHLPYGPTAFFSLHN 171
Query: 213 LVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRD 272
+VLR DI N GN + P L+ NF T+LG RV +++ LFP + RV+TF N D
Sbjct: 172 VVLRHDILNSGNQSEINPHLIFENFTTKLGKRVETILKHLFPPGVKKDSSRVITFANNGD 231
Query: 273 FIFFRHHRCV 282
+I R H V
Sbjct: 232 YISVRQHVYV 241
>gi|356605818|gb|AET24968.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 2 KK-2011]
Length = 179
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Query: 132 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 191
+ITT S+R F E+ + PNS RG YD+K++++ + +D T +I+ R
Sbjct: 1 VITTSGDPSSRLKVFSKEMRLIFPNSQRINRGHYDIKQLVQACRAQDSTDLIIFTETRGN 60
Query: 192 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 251
PD +++ LP GPTA F ++ +V+R DI N G + P L+ N ++LG R +++
Sbjct: 61 PDGMIVCHLPFGPTAFFTMTNVVMRHDIPNCGTMSEQYPHLIFNKLDSKLGIRFMTILKH 120
Query: 252 LFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
LFP P+ +RV+TF N D+I +RHH
Sbjct: 121 LFP-VPKPDSKRVMTFANTDDYISYRHH 147
>gi|396463342|ref|XP_003836282.1| similar to U3 small nucleolar ribonucleoprotein protein IMP4
[Leptosphaeria maculans JN3]
gi|312212834|emb|CBX92917.1| similar to U3 small nucleolar ribonucleoprotein protein IMP4
[Leptosphaeria maculans JN3]
Length = 296
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 113/238 (47%), Gaps = 27/238 (11%)
Query: 63 RKKLKARDA--AEKRALELGEEPPARMTPRTIENTREPDETVCRPD------------DD 108
R+ L RDA A KRA + R + D+T R D +D
Sbjct: 16 RRALTLRDAELASKRAALKASLATGKPLDRNV-----ADDTTLRADYKYDETRTDRTAED 70
Query: 109 ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLK 168
EL ++ + S ++ P++L+TT R S+R F E+ ++P + RG L
Sbjct: 71 ELQLDDEYAQLSGVVD----PRVLVTTSRDPSSRLGTFAKEIRLLLPTAIRLNRGNLVLG 126
Query: 169 KIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPT 226
++ A+ + +I++H +R P AL + P GPTA F L +VLR DI N G +
Sbjct: 127 NLVSSAQASGLSDVILLHEHRGTPTALTVSHFPHGPTASFSLHNVVLRADIPNASRGTVS 186
Query: 227 GHIPELVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
P L+ F T+LG RV ++I+ LFP ++ G RVVTF N D I RHH V
Sbjct: 187 ESYPHLIFEGFGTKLGKRVVQIIKHLFPPREANAKVGSRVVTFKNIEDTIEVRHHVFV 244
>gi|393244845|gb|EJD52356.1| Brix-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 288
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 21/247 (8%)
Query: 42 KNKEKRSAV-HAKLKHQKKV--EKRKKLKARDAAEKR-ALELGEEPPARMTPRTIENTRE 97
+ +E+R + H L+ Q++ +++++LKA A K+ EL ++ A T + +++
Sbjct: 5 QARERREYIYHKSLEAQERATFDRKQRLKAALAEGKQLPTELRKDAQALARDLTFDESQQ 64
Query: 98 PDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNS 157
T DDE + D PKI+ITT R S++ F E+ V PN+
Sbjct: 65 APSTHV---DDEYARAGERD-----------PKIIITTSRDPSSKLLQFAKEMRLVFPNA 110
Query: 158 HYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRK 217
RG Y +K++ + + T ++V+H +R PDAL++ P GPT +F L + LR
Sbjct: 111 TRLNRGNYVVKELAAACRANEITDLVVLHEHRGIPDALILSHFPHGPTIYFTLHNVSLRH 170
Query: 218 DI--KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 275
D+ G + P L+ ++F++ LG RV +++ FP P+ +RV+TF N+ DFI
Sbjct: 171 DLPASARGTVSEAYPHLIFSDFSSALGARVRDILKYCFP-VPKEDSKRVMTFANEGDFIS 229
Query: 276 FRHHRCV 282
FRHH V
Sbjct: 230 FRHHVFV 236
>gi|125560184|gb|EAZ05632.1| hypothetical protein OsI_27850 [Oryza sativa Indica Group]
Length = 180
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 59/229 (25%)
Query: 162 RGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN 221
RG + +I+E + D T +++VH +R +PD L++ LP GPTA+F L +V R DIK+
Sbjct: 3 RGGQVISEIVESCRSHDITDLVLVHEHRGQPDGLIVCHLPFGPTAYFGLLNVVTRHDIKD 62
Query: 222 H---GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
G + P L+L+NF T+ G R +++ LFP P+ +R++TF N+ D+I FRH
Sbjct: 63 RKAMGKMSEAYPHLILDNFTTKTGERTANIVKHLFP-VPKPDSKRIITFANRDDYISFRH 121
Query: 279 HRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKT 338
H ++E G K+ D
Sbjct: 122 H----------------------------------VYEKH-------GGPKSLD------ 134
Query: 339 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 387
L+E GPRF L+L ++ GT D + E+V +P M+T++++
Sbjct: 135 --------LKEVGPRFELRLYQIKRGTVDQAEAQNEFVLRPYMNTAKKQ 175
>gi|356605826|gb|AET24972.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 7 KK-2011]
Length = 175
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 82/143 (57%), Gaps = 1/143 (0%)
Query: 135 TCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDA 194
T R S+R F E+ V PNS RG YD+K++++ K +D T +I+ R PD
Sbjct: 1 TSRDPSSRLKVFAKEMKLVFPNSQRINRGHYDVKQVVQACKAQDSTDLIIFTETRGNPDG 60
Query: 195 LLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP 254
+++ LP GPTA F L+ +V+R DI N G + P L+ +N ++LG R +++ LFP
Sbjct: 61 MIVCHLPFGPTAFFSLANVVMRHDIPNCGTMSEQYPHLIFDNLNSKLGIRFTTILKHLFP 120
Query: 255 QSPEFRGRRVVTFHNQRDFIFFR 277
P+ +RV+TF N DF FR
Sbjct: 121 -IPKTDSKRVLTFANSEDFXXFR 142
>gi|254565149|ref|XP_002489685.1| Component of the SSU processome, which is required for pre-18S rRNA
processing [Komagataella pastoris GS115]
gi|238029481|emb|CAY67404.1| Component of the SSU processome, which is required for pre-18S rRNA
processing [Komagataella pastoris GS115]
gi|328350104|emb|CCA36504.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Komagataella
pastoris CBS 7435]
Length = 285
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 92/175 (52%), Gaps = 1/175 (0%)
Query: 108 DELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDL 167
DE DE+S+ L PK+++TT R S++ F E+ + P S RG Y +
Sbjct: 59 DESIQDEVDDEYSA-LSGVIDPKVVVTTSRDPSSKLQQFSKEIRLLFPTSVRINRGNYVM 117
Query: 168 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG 227
++E K ++V+H +R P L I LP GPTA F L +VLR DI + N +
Sbjct: 118 PNLVESCKGSAVNDLVVLHEHRGVPTTLTISHLPHGPTAIFTLHNVVLRHDINDTSNQSE 177
Query: 228 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
P L+ NF+++LG RV +++ LFP + RV++F N+ DFI R H V
Sbjct: 178 AYPHLIFENFSSKLGKRVETVLKHLFPPGVKKDSPRVISFINKDDFISVRQHVYV 232
>gi|310800152|gb|EFQ35045.1| brix domain-containing protein [Glomerella graminicola M1.001]
Length = 298
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 94/187 (50%), Gaps = 7/187 (3%)
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
D D+ S+L P++L+TT R S+R AF E+ ++P S RG L +++
Sbjct: 72 DLDDEYSMLSGISEPRVLVTTSRDCSSRLAAFSKEIRLLLPTSVRLNRGNLILPDLVQSC 131
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 232
K T ++++H +R P AL I LP GPT F L +VLR DI G+ + P L
Sbjct: 132 KSNALTDLVLLHEHRGNPTALTISHLPHGPTVSFSLHNVVLRHDIPGSIRGSVSEAYPHL 191
Query: 233 VLNNFATRLGHRVGRLIQSLFPQSPEFR-----GRRVVTFHNQRDFIFFRHHRCVPLEFI 287
+ F +RLG R+ ++++ LFP G RVVTF N D I RHH V +
Sbjct: 192 IFEGFKSRLGQRIVKVLKHLFPPRDPITTKAKIGNRVVTFMNNEDSIEVRHHVFVRTSYD 251
Query: 288 SCYMWTI 294
S + +
Sbjct: 252 SVELAEV 258
>gi|452847357|gb|EME49289.1| hypothetical protein DOTSEDRAFT_163537, partial [Dothistroma
septosporum NZE10]
Length = 295
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 118/245 (48%), Gaps = 17/245 (6%)
Query: 63 RKKLKARDA--AEKRA-----LELGEEPPARMT-PRTIENTREPDETVC-RPDDDELFAG 113
R+ L RDA +EKRA L G+ A + + ++ + DE+ R DEL
Sbjct: 15 RRALTLRDAEISEKRAKLKASLASGKPLDASIANDQQLQKDYKYDESRADRTTQDEL--- 71
Query: 114 NDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEY 173
D D+ S L P+ LITT R S+R F E+ ++P S RG L + +
Sbjct: 72 -DLDDEYSYLSGVVDPRPLITTSRDPSSRLATFSKEIKLLLPTSSRINRGNMILPNLADS 130
Query: 174 AKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPE 231
AK T +I++H +R P A+ I P GPTA F L ++LR DI N G + P
Sbjct: 131 AKANGITDMILLHEHRGTPTAMTISHFPHGPTASFSLHNVMLRHDIPNSSRGTVSESYPH 190
Query: 232 LVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISC 289
L+ F T LG RV +++Q LFP + G RVVTF N D I RHH V + S
Sbjct: 191 LIFEGFTTHLGKRVVKILQHLFPPREVSTQLGTRVVTFKNIEDSIEVRHHVFVKTGYQSA 250
Query: 290 YMWTI 294
+ +
Sbjct: 251 ELAEV 255
>gi|443925087|gb|ELU44009.1| rRNA primary transcript binding protein [Rhizoctonia solani AG-1
IA]
Length = 1046
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 129/251 (51%), Gaps = 33/251 (13%)
Query: 42 KNKEKRSAVHAK---LKHQKKVEKRKKLKARDAAEKR--------ALELGEEPPARMTPR 90
+ +E+R ++ K + ++ E+++KLK A+ K+ A ELG ++
Sbjct: 5 QARERREYIYRKSQEAQERQTYERKQKLKDALASGKQLPTELRKDATELG-----KVMRA 59
Query: 91 TIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISEL 150
+I +++ E DD+ AG I+ PKI+ITT R S++ F E+
Sbjct: 60 SILGSKDLSEPTTHIDDEYSRAG--------IMD----PKIVITTSRDPSSKLLQF--EM 105
Query: 151 LSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKL 210
V PNS RG Y +K++ + + D T ++V+H +R PDAL++ P GPT +F L
Sbjct: 106 RLVFPNSTRINRGNYVVKELADACRANDVTDLVVLHEHRGVPDALIVSHFPHGPTLYFSL 165
Query: 211 SKLVLRKDIK--NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 268
+ LR DI N + P L+ F+++LG RV ++ LFP P+ RV+TF
Sbjct: 166 HNVGLRHDIATYNQSTVSEQYPHLIFEGFSSKLGKRVMDALRYLFP-VPKPDATRVMTFA 224
Query: 269 NQRDFIFFRHH 279
N+ DFI FRHH
Sbjct: 225 NENDFISFRHH 235
>gi|380483298|emb|CCF40706.1| brix domain-containing protein [Colletotrichum higginsianum]
Length = 298
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 95/187 (50%), Gaps = 7/187 (3%)
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
D D+ S+L P++L+TT R S+R AF E+ ++P S RG L +++
Sbjct: 72 DLDDEYSMLSGVSEPRVLVTTSRDCSSRLAAFSKEIRLLLPTSVRLNRGNLILPDLVQSC 131
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 232
K T ++++H +R P AL I LP GPT F L +VLR DI G+ + P L
Sbjct: 132 KSNALTDLVLLHEHRGNPTALTISHLPHGPTVSFSLHNVVLRHDIPGSIRGSVSEAYPHL 191
Query: 233 VLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFI 287
+ F +RLG R+ ++++ LFP S G RVVTF N D I RHH V +
Sbjct: 192 IFEGFKSRLGQRIVKVLKHLFPPRDPISSRSKIGNRVVTFLNNEDSIEVRHHVFVRTSYD 251
Query: 288 SCYMWTI 294
S + +
Sbjct: 252 SVELAEV 258
>gi|451848177|gb|EMD61483.1| hypothetical protein COCSADRAFT_162931 [Cochliobolus sativus
ND90Pr]
Length = 295
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 94/182 (51%), Gaps = 5/182 (2%)
Query: 117 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
DE++ L P+IL+TT R S+R F E+ ++P S RG L ++E AK
Sbjct: 75 DEYAQ-LSGVVDPRILVTTSRDPSSRLGTFAKEIRLLLPTSIRLNRGNMILPNLVESAKS 133
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVL 234
+ I+++H +R P AL + P GPTA F L +VLR DI N G + P L+
Sbjct: 134 GGLSDIVLLHEHRGTPTALTVSHFPHGPTASFSLHNVVLRADIPNSSRGTVSESYPHLIF 193
Query: 235 NNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMW 292
F T+LG R ++++ LFP ++ G RVVTF N D I RHH V + S +
Sbjct: 194 EGFTTKLGQRCVQILKHLFPPREANAKVGNRVVTFKNIEDTIEVRHHVFVKTGYQSVELA 253
Query: 293 TI 294
+
Sbjct: 254 EV 255
>gi|296816785|ref|XP_002848729.1| U3 small nucleolar ribonucleoprotein IMP4 [Arthroderma otae CBS
113480]
gi|238839182|gb|EEQ28844.1| U3 small nucleolar ribonucleoprotein IMP4 [Arthroderma otae CBS
113480]
Length = 299
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 88/171 (51%), Gaps = 3/171 (1%)
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
D D+ ++ P+ L+TT R S+R F E+ ++P S RGT L ++ A
Sbjct: 76 DIDDEYAVTSGLVDPRPLVTTSRDPSSRLSTFAKEIRLLMPTSIRLNRGTLVLNDLVASA 135
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 232
+ +++VH +R P A+ I LP GPTA F L +VLR DI N G + P L
Sbjct: 136 TASALSDMVIVHEHRGTPTAITISHLPHGPTASFSLHNVVLRADIPNAARGTVSESYPHL 195
Query: 233 VLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRCV 282
+ F T+LG RV +++ LFP + G RVVTF N D I RHH V
Sbjct: 196 IFEGFTTKLGKRVVQILSHLFPPREAGKVGSRVVTFKNIEDSIEVRHHVFV 246
>gi|365987946|ref|XP_003670804.1| hypothetical protein NDAI_0F02430 [Naumovozyma dairenensis CBS 421]
gi|343769575|emb|CCD25561.1| hypothetical protein NDAI_0F02430 [Naumovozyma dairenensis CBS 421]
Length = 289
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 96/184 (52%), Gaps = 4/184 (2%)
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
D++ D +EL ++ S I++ P+I+++T R S R F E+ + PN+
Sbjct: 59 DQSHPDADKEELEIDDEYSHTSGIVE----PRIIVSTSRDPSTRLSQFAKEIKLLFPNAV 114
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 218
RG Y + ++ + +I++H +R P +L + P GPTA+F L +VLR D
Sbjct: 115 RLNRGNYVMPNLVSACINSGTSDLIILHEHRGVPTSLTVSHFPHGPTAYFSLHNVVLRHD 174
Query: 219 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
I N GN + P L+ +NF T LG RV +++ LF + RV+TF N+ DFI R
Sbjct: 175 ILNAGNQSEVNPHLIFDNFTTDLGKRVVTILKHLFAPGVKVDSSRVITFANRGDFISVRQ 234
Query: 279 HRCV 282
H V
Sbjct: 235 HVYV 238
>gi|452987991|gb|EME87746.1| hypothetical protein MYCFIDRAFT_62535 [Pseudocercospora fijiensis
CIRAD86]
Length = 295
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 89/173 (51%), Gaps = 4/173 (2%)
Query: 121 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 180
S L P++L+TT R S+R AF E+ ++P S RG L + AK +
Sbjct: 78 SYLSGVVDPRVLVTTSRDPSSRLSAFAKEIRLLLPTSIRLNRGNLILPNLTASAKSSGLS 137
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFA 238
+I++H +R P A+ + LP GPTA F L +VLR DI N G + P L+ F
Sbjct: 138 DMILLHEHRGTPTAMTVSHLPHGPTASFSLHNVVLRHDIPNASRGTVSESYPHLIFEGFT 197
Query: 239 TRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISC 289
T+LG RV +++Q LFP + G RV+TF N D I RHH V + S
Sbjct: 198 TQLGKRVVKILQHLFPPRDGGKNLGSRVITFKNIEDSIEVRHHVFVKTGYQSV 250
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
KT Q V L E GPR T++L ++ GT + K G+ EW TS+++ +L
Sbjct: 244 KTGYQSV--ELAEVGPRMTMRLFEIRQGTLEKKDGDVEWHMNQYTRTSKKKDYL 295
>gi|121701375|ref|XP_001268952.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Aspergillus clavatus NRRL 1]
gi|119397095|gb|EAW07526.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Aspergillus clavatus NRRL 1]
Length = 299
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 120/236 (50%), Gaps = 16/236 (6%)
Query: 54 LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDD---DEL 110
L+ EKR +LKA A K AL+ P+ + + + DE++ PD D
Sbjct: 20 LRDASIAEKRAQLKASLATGK-ALD-----PSIADDKALREDFKYDESLQTPDKQSKDTD 73
Query: 111 FAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKK 169
+A D DE++ L G P+ ++TT R S R F E+ ++P S RG L +
Sbjct: 74 YADLD-DEYA--LTSGIIDPRPIVTTSRSPSVRLGTFAKEIRLLLPTSIRLNRGNLVLPE 130
Query: 170 IIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTG 227
++ A T +I++H +R P A+ I LP GPTA F L +VLR DI N G +
Sbjct: 131 LVSSANAAALTDMILLHEHRGTPTAMTISHLPHGPTASFSLHNVVLRADIPNAARGTVSE 190
Query: 228 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRCV 282
P L+ F T+LG RV ++++ LFP + + G RVV+F N+ D I RHH V
Sbjct: 191 SYPHLIFEGFKTKLGLRVVQILKHLFPPREDGKVGNRVVSFVNKEDSIEVRHHVFV 246
>gi|156065923|ref|XP_001598883.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154691831|gb|EDN91569.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 326
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 118/248 (47%), Gaps = 20/248 (8%)
Query: 63 RKKLKARDA--AEKRALELGEEPPARMTPRTIENTREPDETV----CRPD---DDELFAG 113
R+ L RDA +EKRA + +I N ++ E RPD ++EL
Sbjct: 15 RRALTLRDAEISEKRAKLRASLASGKPLDPSIANDKKLRENYKYDESRPDLTANEELDLD 74
Query: 114 NDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEY 173
++ + S I+ P++L+TT R S+R AF E+ +IP S RG L +I
Sbjct: 75 DEYAQLSGIVD----PRVLVTTSRDPSSRLSAFAKEIRLLIPTSIRLNRGNLILPNLITS 130
Query: 174 AKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPE 231
A+ + II++H +R P AL + P GPT F L +VLR DI N G + P
Sbjct: 131 AQASGLSDIILLHEHRGTPTALTLSHFPHGPTISFSLHNVVLRHDIPNSSRGTVSESYPH 190
Query: 232 LVLNNFATRLGHRVGRLIQSLFPQSPEFR-----GRRVVTFHNQRDFIFFRHHRCVPLEF 286
L+ F +RLG R+ ++++ +FP G RVVTF N D I RHH V +
Sbjct: 191 LIFEGFTSRLGLRIVKILKHIFPPREAITNKTKIGNRVVTFKNIEDSIEVRHHVFVKTGY 250
Query: 287 ISCYMWTI 294
S + +
Sbjct: 251 QSVELAEV 258
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
KT Q V L E GPR T++ ++ GT + K G+ EW TS+++ +L
Sbjct: 247 KTGYQSV--ELAEVGPRMTMRCFEIRGGTLENKDGDVEWRMNQYTRTSKKKDYL 298
>gi|453089105|gb|EMF17145.1| Brix-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 295
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 91/178 (51%), Gaps = 4/178 (2%)
Query: 121 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 180
S L P++L+TT R S+R F E+ ++P S RG L ++ AK +
Sbjct: 78 SYLSGVVEPRVLVTTSRDPSSRLGQFSKEIRLLLPTSIRLNRGNTILPNLVSSAKANGLS 137
Query: 181 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFA 238
+I++H +R P AL I P GPTA F L +VLR DI N G + P L+ F
Sbjct: 138 DLILLHEHRGTPTALTISHFPHGPTASFSLHNVVLRHDIPNVSRGTVSESYPHLIFEGFT 197
Query: 239 TRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTI 294
T+LG RV +++Q LFP +S G RVVTF N D I RHH V + S + +
Sbjct: 198 TQLGKRVLKILQHLFPPRESGTKLGSRVVTFKNIEDSIEVRHHVFVKTGYQSVELAEV 255
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
KT Q V L E GPR T++L ++ GT + K G+ EW TS+++ +L
Sbjct: 244 KTGYQSV--ELAEVGPRMTMRLFEIRQGTAENKDGDVEWHMNQYTRTSKKKDYL 295
>gi|350629791|gb|EHA18164.1| hypothetical protein ASPNIDRAFT_38235 [Aspergillus niger ATCC 1015]
Length = 326
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 115/231 (49%), Gaps = 12/231 (5%)
Query: 63 RKKLKARDA--AEKRA-----LELGEE-PPARMTPRTIENTREPDETVCRPDDDELFAGN 114
R+ L RDA AEKRA L G+ P+ +++ + DE++ PD+
Sbjct: 44 RRALTLRDASIAEKRAQLKASLASGKPLDPSIAEDKSLREDFKYDESIT-PDNQNKDGDV 102
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
D D+ ++ P+ ++TT R S R F E+ ++P S RG L ++ A
Sbjct: 103 DLDDEYALTSGIADPRPIVTTSRSPSVRLGTFAKEIRLLLPTSIRLNRGNLVLPDLVSSA 162
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 232
T +I+VH +R P A+ I LP GPTA F L +VLR DI N G + P L
Sbjct: 163 NAAALTDMILVHEHRGTPTAMTISHLPHGPTASFSLHNVVLRADIPNAARGTVSESYPHL 222
Query: 233 VLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRCV 282
+ F T+LG RV ++++ LFP + G RVV+F N+ D I RHH V
Sbjct: 223 IFEGFKTKLGLRVVQILKHLFPPRETGKVGNRVVSFVNKEDSIEVRHHVFV 273
>gi|145240147|ref|XP_001392720.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Aspergillus
niger CBS 513.88]
gi|134077234|emb|CAK45575.1| unnamed protein product [Aspergillus niger]
Length = 297
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 115/231 (49%), Gaps = 12/231 (5%)
Query: 63 RKKLKARDA--AEKRA-----LELGEE-PPARMTPRTIENTREPDETVCRPDDDELFAGN 114
R+ L RDA AEKRA L G+ P+ +++ + DE++ PD+
Sbjct: 15 RRALTLRDASIAEKRAQLKASLASGKPLDPSIAEDKSLREDFKYDESIT-PDNQNKDGDV 73
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
D D+ ++ P+ ++TT R S R F E+ ++P S RG L ++ A
Sbjct: 74 DLDDEYALTSGIADPRPIVTTSRSPSVRLGTFAKEIRLLLPTSIRLNRGNLVLPDLVSSA 133
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 232
T +I+VH +R P A+ I LP GPTA F L +VLR DI N G + P L
Sbjct: 134 NAAALTDMILVHEHRGTPTAMTISHLPHGPTASFSLHNVVLRADIPNAARGTVSESYPHL 193
Query: 233 VLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRCV 282
+ F T+LG RV ++++ LFP + G RVV+F N+ D I RHH V
Sbjct: 194 IFEGFKTKLGLRVVQILKHLFPPREAGKVGNRVVSFVNKEDSIEVRHHVFV 244
>gi|378756370|gb|EHY66394.1| hypothetical protein NERG_00034 [Nematocida sp. 1 ERTm2]
Length = 340
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 132/287 (45%), Gaps = 70/287 (24%)
Query: 108 DELFA---GNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 164
D ++A G DEFS + +ITT R S+ F L +++PN+ RG
Sbjct: 65 DAIYAFEDGEKEDEFS-----HTEARPIITTSRSPSDSLIRFAKSLKNILPNAEKLNRGK 119
Query: 165 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 224
+ ++++++ A KK+ T +I+V+ NR P +L+I LP GPT +F + +I
Sbjct: 120 HMIQELVQSAIKKNHTDLIMVNENRGVPSSLIISHLPHGPTTYFSIH----HPNIDTEEP 175
Query: 225 PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSP-EFRGRRVVTFHNQRDFIFFRHHRCVP 283
+ IP ++ +NF T LG RV R++ SLFPQ P + +R+++F N+ D I F
Sbjct: 176 ISTAIPAVIFDNFTTPLGMRVKRILSSLFPQLPGSEKPKRMISFINREDSILFTQ----- 230
Query: 284 LEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKV 343
F++ KG + +KTS Q
Sbjct: 231 -------------------------------FKSTFQKG---------EVTLQKTSPQ-- 248
Query: 344 ITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
FT+KL ++ GT D E E+V +P ++T+R++F+L
Sbjct: 249 ----------FTMKLYEIRAGTLDMTYAEKEFVFRPYLNTARKKFYL 285
>gi|398411711|ref|XP_003857193.1| hypothetical protein MYCGRDRAFT_66663, partial [Zymoseptoria
tritici IPO323]
gi|339477078|gb|EGP92169.1| hypothetical protein MYCGRDRAFT_66663 [Zymoseptoria tritici IPO323]
Length = 295
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 15/244 (6%)
Query: 63 RKKLKARDA--AEKRA-----LELGEE-PPARMTPRTIENTREPDETVCRPDDDELFAGN 114
R+ L RDA AEKRA L G++ P+ R + + DE+ R D
Sbjct: 15 RRALTLRDAEIAEKRAKLKTSLATGKQLDPSIANDRQLRQDYKYDES--RADRTLDDELE 72
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
DE+S L P++L+TT R S+R +F E+ ++P S RG L ++ A
Sbjct: 73 LDDEYSH-LSGVVDPRVLVTTSRDPSSRLASFAKEIRLLLPTSIRLNRGNLVLPNLVGSA 131
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 232
K + +I++H +R P A+ + P GPTA F L +VLR DI N G + P L
Sbjct: 132 KSSGLSDLILLHEHRGTPTAMTVSHFPHGPTASFSLHNVVLRHDIPNASRGTVSESYPHL 191
Query: 233 VLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCY 290
+ F T LG RV +++Q LFP + G RVVTF N D I RHH V + S
Sbjct: 192 IFEGFTTPLGRRVVKILQHLFPPREGGTKLGSRVVTFKNIEDSIEVRHHVFVKTAYQSVE 251
Query: 291 MWTI 294
+ +
Sbjct: 252 LAEV 255
>gi|154305572|ref|XP_001553188.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347828533|emb|CCD44230.1| similar to U3 small nucleolar ribonucleoprotein protein IMP4
[Botryotinia fuckeliana]
Length = 298
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 114/236 (48%), Gaps = 20/236 (8%)
Query: 63 RKKLKARDA--AEKRALELGEEPPARMTPRTIENTREPDETV----CRPD---DDELFAG 113
R+ L RDA +EKRA + +I N ++ E RPD ++EL
Sbjct: 15 RRALTLRDAEISEKRAKLRASLASGKPLDPSIANDKKLREDYKYDESRPDLTANEELDLD 74
Query: 114 NDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEY 173
++ + S I+ P++LITT R S+R AF E+ +IP S RG L +I
Sbjct: 75 DEYAQLSGIVD----PRVLITTSRDPSSRLSAFAKEIRLLIPTSIRLNRGNLILPSLITS 130
Query: 174 AKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPE 231
A+ + II++H +R P AL + P GPT F L +VLR DI N G + P
Sbjct: 131 AQASGLSDIILLHEHRGTPTALTLSHFPHGPTISFSLHNVVLRHDIPNSSRGTVSESYPH 190
Query: 232 LVLNNFATRLGHRVGRLIQSLFPQSPEFR-----GRRVVTFHNQRDFIFFRHHRCV 282
L+ F +RLG R+ ++++ +FP G RVVTF N D I RHH V
Sbjct: 191 LIFEGFTSRLGLRIVKILKHIFPPREAITNKTKIGSRVVTFKNIEDSIEVRHHVFV 246
>gi|451999185|gb|EMD91648.1| hypothetical protein COCHEDRAFT_1224736 [Cochliobolus
heterostrophus C5]
Length = 295
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 94/182 (51%), Gaps = 5/182 (2%)
Query: 117 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
DE++ L P+IL+TT R S+R F E+ ++P S RG L ++E AK
Sbjct: 75 DEYAQ-LSGVVDPRILVTTSRDPSSRLGTFAKEIRLLLPTSIRLNRGNMILPNLVESAKS 133
Query: 177 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVL 234
+ ++++H +R P AL + P GPTA F L +VLR DI N G + P L+
Sbjct: 134 GGLSDMVLLHEHRGTPTALTVSHFPHGPTASFSLHNVVLRADIPNSSRGTVSESYPHLIF 193
Query: 235 NNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMW 292
F T+LG R ++++ LFP ++ G RVVTF N D I RHH V + S +
Sbjct: 194 EGFTTKLGQRCVQILKHLFPPREANAKVGNRVVTFKNIEDTIEVRHHVFVKTGYQSVELA 253
Query: 293 TI 294
+
Sbjct: 254 EV 255
>gi|358371938|dbj|GAA88544.1| U3 small nucleolar ribonucleoprotein protein Imp4 [Aspergillus
kawachii IFO 4308]
Length = 297
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 115/231 (49%), Gaps = 12/231 (5%)
Query: 63 RKKLKARDA--AEKRA-----LELGEE-PPARMTPRTIENTREPDETVCRPDDDELFAGN 114
R+ L RDA AEKRA L G+ P+ +++ + DE++ PD+
Sbjct: 15 RRALTLRDASIAEKRAQLKASLASGKPLDPSIAEDKSLREDFKYDESIT-PDNQNKDGDV 73
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
D D+ ++ P+ ++TT R S R F E+ ++P S RG L ++ A
Sbjct: 74 DLDDEYALTSGIADPRPIVTTSRSPSVRLGTFAKEIRLLLPTSIRLNRGNLVLPDLVSSA 133
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 232
T +I+VH +R P A+ I LP GPTA F L +VLR DI N G + P L
Sbjct: 134 TAAALTDMILVHEHRGTPTAMTISHLPHGPTASFSLHNVVLRADIPNAARGTVSESYPHL 193
Query: 233 VLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRCV 282
+ F T+LG RV ++++ LFP + G RVV+F N+ D I RHH V
Sbjct: 194 IFEGFKTKLGLRVVQILKHLFPPRETGKVGNRVVSFVNKEDNIEVRHHVFV 244
>gi|326927012|ref|XP_003209689.1| PREDICTED: u3 small nucleolar ribonucleoprotein protein IMP4-like
[Meleagris gallopavo]
Length = 292
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 85/151 (56%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+++TT R S+R F EL VIP + RG ++ ++ + T ++V+H
Sbjct: 85 PKVMVTTSRDPSSRLRVFAKELCLVIPGARRLNRGRAEVGVLVSACRAAGVTDLLVLHET 144
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD L++ LP GPTAHF LS VLR ++ G P ++L+ + LG R+G +
Sbjct: 145 RGRPDGLVLCHLPHGPTAHFTLSGAVLRHEVGGLGGAPLGAPHILLHRLDSALGRRLGTI 204
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P + RRVVTF N+ D I R+H
Sbjct: 205 LKHLFP-VPRPQTRRVVTFANEDDVILVRNH 234
>gi|358395793|gb|EHK45180.1| hypothetical protein TRIATDRAFT_292723 [Trichoderma atroviride IMI
206040]
Length = 297
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 126/255 (49%), Gaps = 22/255 (8%)
Query: 40 MIKNK--EKRSAVHAK---LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIEN 94
M+K K +KR ++ + L+ + EKR KL+A A+ K P +++
Sbjct: 1 MVKGKGFDKRDYLYRRALLLRDAEISEKRAKLRASLASGKPL------DPEIANDKSLRK 54
Query: 95 TREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
+ DE+ +++L ++ + S I+ P++L+TT R S R AF E+ ++
Sbjct: 55 DYQYDESRDLTTNEQLDLDDEYAQLSGIVD----PRVLVTTSRDPSARLSAFAKEIRLLL 110
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
P S RG L +++ A+ + ++++H +R P AL I LP GPT F L +V
Sbjct: 111 PTSIRMNRGNLILPDLVKSAQSAGLSDMLLLHEHRGTPTALTISHLPHGPTVSFSLHNVV 170
Query: 215 LRKDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTF 267
LR DI G + P L+ + F TRLG RV ++++ LFP S G RVVTF
Sbjct: 171 LRHDIPGSIRGTVSEAYPHLIFDGFTTRLGERVVKVLKHLFPPREPITSKNKVGNRVVTF 230
Query: 268 HNQRDFIFFRHHRCV 282
N D I RHH V
Sbjct: 231 KNIDDSIEVRHHVFV 245
>gi|119183906|ref|XP_001242930.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|392865835|gb|EAS31676.2| U3 small nucleolar ribonucleoprotein IMP4 [Coccidioides immitis RS]
Length = 303
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 112/237 (47%), Gaps = 14/237 (5%)
Query: 54 LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAG 113
L+ EKR KLKA A+ K P+ +++ + DE++
Sbjct: 20 LRDASIAEKRAKLKASLASGK------PLDPSIANDKSLRQDFKYDESLQTDSKASASNA 73
Query: 114 NDADEFS-----SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLK 168
DAD+ ++ P+ L+TT R S+R F E+ ++P S RGT L
Sbjct: 74 KDADQVDIDDEYAVTSGLVDPRPLVTTSRSPSSRLSTFAKEIRLLLPTSIRLNRGTLVLP 133
Query: 169 KIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPT 226
++ A T ++++H +R P A+ I LP GPTA F + +VLR DI N G +
Sbjct: 134 DLVASANAAALTDMVLLHEHRGTPTAITISHLPHGPTASFSIHNVVLRADIPNAARGTVS 193
Query: 227 GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRCV 282
P L+ F T+LG RV ++++ LFP + G RVVTF N D I RHH V
Sbjct: 194 ESYPHLIFEGFKTKLGMRVVQILKHLFPPREAGKVGSRVVTFKNIDDSIEVRHHVFV 250
>gi|342321055|gb|EGU12993.1| Hypothetical Protein RTG_01034 [Rhodotorula glutinis ATCC 204091]
Length = 481
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P++LITT R S++ F EL IPNS RG Y + ++ + + T +IVVH +
Sbjct: 275 PRVLITTSRDPSSKLQQFAKELRLCIPNSTRINRGNYVMSELSDACRANQMTDLIVVHEH 334
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 246
R PDAL++ P GPT F L+ +VLR D+ T P L+ F ++LG RV
Sbjct: 335 RGVPDALMLSHFPHGPTVLFTLTGVVLRHDLGGLQGTTISEAYPHLIFEGFGSKLGKRVQ 394
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
+++ +FP P+ +R + F N+ DFI FRHH V
Sbjct: 395 DVLKYIFP-VPKDDSKRTLAFVNEGDFISFRHHVFV 429
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 387
KTS ++V +L E GPRF ++ +++GT + + + EWV +P M T R+R
Sbjct: 430 KTSHKEV--QLAEVGPRFEMRPYEIRNGTIEQQEADVEWVLRPYMRTGRKR 478
>gi|67516731|ref|XP_658251.1| hypothetical protein AN0647.2 [Aspergillus nidulans FGSC A4]
gi|40745996|gb|EAA65152.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 282
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 114/266 (42%), Gaps = 60/266 (22%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P+ ++TT R S R F E+ ++P S RG L ++ A T ++++H +
Sbjct: 73 PRPIVTTSRSPSVRLGTFAKEIRLLLPTSIRLNRGNLVLPDLVASANSASLTDMVILHEH 132
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVG 246
R P A+ I LP GPTA F L +VLR DI N G + P L+ F T+LG RV
Sbjct: 133 RGTPTAMTISHLPHGPTASFSLHNVVLRADIPNAARGTVSESYPHLIFEGFKTKLGKRVV 192
Query: 247 RLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKA 305
++++ LFP + G RVVTF N+ D I RHH
Sbjct: 193 QILKHLFPPREAGKVGNRVVTFVNKEDSIEVRHH-------------------------- 226
Query: 306 FCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT 365
+ + Y KDA+ L E GPR T++L ++ G+
Sbjct: 227 -VFVKTGY-----------------KDAE------------LAEVGPRMTMRLFEIRGGS 256
Query: 366 FD-TKGGEFEWVHKPEMDTSRRRFFL 390
+ G+ EW TSR++ +L
Sbjct: 257 LEKGSSGDVEWALTQYTRTSRKKDYL 282
>gi|212532109|ref|XP_002146211.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Talaromyces marneffei ATCC 18224]
gi|210071575|gb|EEA25664.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Talaromyces marneffei ATCC 18224]
Length = 319
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 124/258 (48%), Gaps = 21/258 (8%)
Query: 37 LPSMIKN--KEKRSAVHAK---LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRT 91
L +MI+ +E+R ++ K L+ EKR KLKA A+ K P+
Sbjct: 18 LTAMIRRQARERRDYLYRKALLLRDASIAEKRAKLKAALASGK------PLDPSIANDAE 71
Query: 92 IENTREPDETV---CRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 148
+ + DE++ + DDE D D+ ++ P+ L+TT R S R F
Sbjct: 72 LREDFKYDESLPSKGQGKDDEFM---DVDDEYALTSGLVDPRPLVTTSRSPSARLSTFAK 128
Query: 149 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 208
E+ ++P S RG L ++ A T ++++H +R P A+ I LP GPTA F
Sbjct: 129 EIRLLLPTSIRLNRGNLILPDLVSSANAAALTDMVLLHEHRGTPTAITISHLPHGPTASF 188
Query: 209 KLSKLVLRKDI--KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRV 264
L ++LR DI + G + P L+ F T+LG RV ++++ LFP + G RV
Sbjct: 189 SLHNVMLRADIPDSSRGTVSESYPHLIFEGFTTKLGKRVVQILKHLFPPREGGGKLGNRV 248
Query: 265 VTFHNQRDFIFFRHHRCV 282
VTF N+ D I RHH V
Sbjct: 249 VTFQNREDAIEVRHHVFV 266
>gi|406864054|gb|EKD17100.1| U3 small nucleolar ribonucleoprotein IMP4 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 301
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 121/250 (48%), Gaps = 18/250 (7%)
Query: 48 SAVHAKLKHQKKVEKRKKLKARDA--AEKRA-----LELGEE-PPARMTPRTIENTREPD 99
+A+ + + +K R+ + RDA +EKRA L G+ PA + + + D
Sbjct: 3 TAIRKRQRQRKDYIYRRAVTLRDAEISEKRAKLRSSLASGKPLDPAIANDKRLREDYKYD 62
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
E+ RPD A + DE++ L P++L+TT R S R +F E+ +IP +
Sbjct: 63 ES--RPDLSASEALDLDDEYAQ-LSGIVDPRVLVTTSRDPSTRLSSFAKEIRLLIPTAIR 119
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
RG L ++ A+ T I+++H +R P AL + P GPT F L +VLR DI
Sbjct: 120 LNRGNVILPNLVSSAQAGGLTDIVLLHEHRGVPTALTLSHFPHGPTVSFSLHNVVLRHDI 179
Query: 220 KN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-----GRRVVTFHNQRD 272
N G + P L+ F ++LG R+ R+++ +FP G RVVTF N D
Sbjct: 180 PNSSRGTVSESYPHLIFEGFTSKLGLRIVRVLKHIFPPREAITNKTKVGSRVVTFKNIED 239
Query: 273 FIFFRHHRCV 282
I RHH V
Sbjct: 240 SIEVRHHVFV 249
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
+T Q V L E GPR T++ ++ GT + K G+ EW TSR++ +L
Sbjct: 250 RTGYQSV--ELAEVGPRMTMRCFEIRGGTLENKDGDVEWRMNQYTRTSRKKDYL 301
>gi|258570657|ref|XP_002544132.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Uncinocarpus
reesii 1704]
gi|237904402|gb|EEP78803.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Uncinocarpus
reesii 1704]
Length = 342
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 124/260 (47%), Gaps = 19/260 (7%)
Query: 36 ILPSMIKN--KEKRSAVHAK---LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPR 90
+L MI+ +E+R ++ + L+ EKR KLKA A+ K P+ +
Sbjct: 36 LLFGMIRRQARERRDYLYRRALLLRDASIAEKRAKLKASLASGK------PLDPSIANDK 89
Query: 91 TIENTREPDETVCRPDDDELFAGNDADEFS-----SILKQGCAPKILITTCRFNSNRGPA 145
+ + DE++ D DAD+ ++ P+ L+TT R S+R
Sbjct: 90 ALRQDFKYDESLQTGPDASGANSKDADQVDIDDEYAVTSGLVDPRPLVTTSRSPSSRLST 149
Query: 146 FISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPT 205
F E+ ++P S RGT L ++ A T +I++H +R P A+ I LP GPT
Sbjct: 150 FAKEIRLLLPTSIRLNRGTLVLPDLVASASAAALTDMILLHEHRGTPTAITISHLPHGPT 209
Query: 206 AHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-GR 262
A F + +VLR DI N G + P L+ F ++LG RV ++++ LFP + G
Sbjct: 210 ASFSIHNVVLRADIPNAARGTVSESYPHLIFEGFKSKLGMRVVQILKHLFPPRDAGKIGN 269
Query: 263 RVVTFHNQRDFIFFRHHRCV 282
RVVTF N D I RHH V
Sbjct: 270 RVVTFKNIEDSIEVRHHVFV 289
>gi|303320093|ref|XP_003070046.1| Brix domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240109732|gb|EER27901.1| Brix domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320031875|gb|EFW13832.1| U3 small nucleolar ribonucleoprotein IMP4 [Coccidioides posadasii
str. Silveira]
Length = 303
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 112/237 (47%), Gaps = 14/237 (5%)
Query: 54 LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAG 113
L+ EKR KLKA A+ K P+ +++ + DE++
Sbjct: 20 LRDASIAEKRAKLKASLASGK------PLDPSIANDKSLRQDFKYDESLQTDSKASGSNA 73
Query: 114 NDADEFS-----SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLK 168
DAD+ ++ P+ L+TT R S+R F E+ ++P S RGT L
Sbjct: 74 KDADQVDIDDEYAVTSGLVDPRPLVTTSRSPSSRLSTFAKEIRLLLPTSIRLNRGTLVLP 133
Query: 169 KIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPT 226
++ A T ++++H +R P A+ I LP GPTA F + +VLR DI N G +
Sbjct: 134 DLVASANAAALTDMVLLHEHRGTPTAITISHLPHGPTASFSIHNVVLRADIPNAARGTVS 193
Query: 227 GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRCV 282
P L+ F T+LG RV ++++ LFP + G RVVTF N D I RHH V
Sbjct: 194 ESYPHLIFEGFKTKLGMRVVQILKHLFPPREAGKVGSRVVTFKNIDDSIEVRHHVFV 250
>gi|189188942|ref|XP_001930810.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187972416|gb|EDU39915.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 295
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 119/245 (48%), Gaps = 13/245 (5%)
Query: 54 LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAG 113
L+ + KR LKA A+ K L ++ T RT + + + R ++EL
Sbjct: 20 LRDAELASKRASLKASLASGK---PLSKDVADDTTLRT--DYKYDESRAERTAEEELGLD 74
Query: 114 NDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEY 173
++ + S ++ P+IL+TT R S+R F E+ ++P + RG L ++
Sbjct: 75 DEYAQLSGVVD----PRILVTTSRDPSSRLGTFAKEIRLLLPTAIRLNRGNMVLPNLVSS 130
Query: 174 AKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPE 231
AK + I+++H +R P AL I P GPTA F L ++LR DI N G + P
Sbjct: 131 AKSGGLSDIVLLHEHRGTPTALTISHFPHGPTASFSLHNVILRADIPNASRGTVSESYPH 190
Query: 232 LVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISC 289
L+ + F T LG R ++++ LFP ++ G RVVTF N D I RHH V F S
Sbjct: 191 LIFDGFTTPLGTRCVQILKHLFPPREATAKVGNRVVTFKNIEDTIEVRHHVFVKTGFQSV 250
Query: 290 YMWTI 294
+ +
Sbjct: 251 ELAEV 255
>gi|295657688|ref|XP_002789410.1| U3 small nucleolar ribonucleoprotein IMP4 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226283832|gb|EEH39398.1| U3 small nucleolar ribonucleoprotein IMP4 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 309
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 116/239 (48%), Gaps = 21/239 (8%)
Query: 63 RKKLKARDA--AEKRA-----LELGEE-PPARMTPRTIENTREPDETVCRPDDDELFAGN 114
RK L RDA AEKRA L G+ P+ +T+ + DE++ P +L N
Sbjct: 20 RKALLLRDASIAEKRAKLRASLASGKPLDPSIANDKTLREDFKYDESL--PSSSKLGDAN 77
Query: 115 DADEFSS------ILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDL 167
D +L G P+ LITT R S R F E+ +IP S RG +
Sbjct: 78 SKDSDLLDLDDEYVLTSGIVDPRPLITTSRSPSARLSTFAKEMRLLIPTSIRINRGNLVI 137
Query: 168 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNP 225
++ AK + +I++H +R P A+ I LP GPTA F L ++LR DI N G
Sbjct: 138 SDLLASAKASALSDMIILHEHRGTPTAITISHLPHGPTASFSLHNVMLRADIPNSARGTV 197
Query: 226 TGHIPELVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
+ P L+ F T+LG RV ++++ +FP ++ G RVVTF N D I RHH V
Sbjct: 198 SESYPHLIFEGFTTKLGARVVKILKHIFPPREANGKLGSRVVTFENIEDSIEVRHHVFV 256
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 390
KT Q V L E GPR T++L ++ GT + GGE EW TSR++ +L
Sbjct: 257 KTGYQSV--ELAEVGPRMTMRLFQIRGGTLEKDSGGELEWALSQYTRTSRKKDYL 309
>gi|330913998|ref|XP_003296450.1| hypothetical protein PTT_06561 [Pyrenophora teres f. teres 0-1]
gi|311331375|gb|EFQ95452.1| hypothetical protein PTT_06561 [Pyrenophora teres f. teres 0-1]
Length = 295
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 99/195 (50%), Gaps = 8/195 (4%)
Query: 104 RPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG 163
R ++EL ++ + S ++ P+IL+TT R S+R F E+ ++P + RG
Sbjct: 65 RTAEEELGLDDEYAQLSGVVD----PRILVTTSRDPSSRLGTFAKEIRLLLPTAIRLNRG 120
Query: 164 TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN-- 221
L ++ AK + I+++H +R P AL I P GPTA F L ++LR DI N
Sbjct: 121 NMVLPNLVSSAKSGGLSDIVLLHEHRGTPTALTISHFPHGPTASFSLHNVILRADIPNAS 180
Query: 222 HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHH 279
G + P L+ + F T LG R ++++ LFP ++ G RVVTF N D I RHH
Sbjct: 181 RGTVSESYPHLIFDGFNTPLGARCVQILKHLFPPREATAKVGNRVVTFKNIEDTIEVRHH 240
Query: 280 RCVPLEFISCYMWTI 294
V F S + +
Sbjct: 241 VFVKTGFQSVELAEV 255
>gi|226286940|gb|EEH42453.1| U3 small nucleolar ribonucleoprotein IMP4 [Paracoccidioides
brasiliensis Pb18]
Length = 309
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 28/274 (10%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDA--AEKRA-----LELGEE-PPARMTPRTI 92
++N ++R A + ++ RK L RDA AEKRA L G+ P+ +T+
Sbjct: 3 LQNPQRRQA-----RERRDYLYRKALLLRDASIAEKRAKLRASLASGKPLDPSVANDKTL 57
Query: 93 ENTREPDETVCRPDDDELFAGNDADEFSS------ILKQGCA-PKILITTCRFNSNRGPA 145
+ DE++ P +L N D +L G P+ LITT R S R
Sbjct: 58 REDFKYDESL--PSSSKLGDANSKDSDLLDLDDEYVLTSGIVDPRPLITTSRSPSARLST 115
Query: 146 FISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPT 205
F E+ +IP S RG + ++ AK + +IV+H +R P A+ I LP GPT
Sbjct: 116 FAKEMRLLIPTSIRINRGNLVIPDLLASAKASALSDMIVLHEHRGTPTAITISHLPHGPT 175
Query: 206 AHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR- 262
A F L ++LR DI N G + P L+ F T+LG RV ++++ +FP E G+
Sbjct: 176 ASFSLHNVMLRADIPNSARGTVSESYPHLIFEGFTTKLGARVVKILKHIFPPR-EVNGKL 234
Query: 263 --RVVTFHNQRDFIFFRHHRCVPLEFISCYMWTI 294
RVVTF N D I RHH V + S + +
Sbjct: 235 GSRVVTFENIEDSIEVRHHVFVKTGYQSVELAEV 268
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 390
KT Q V L E GPR T+KL ++ GT + GGE EW TSR++ +L
Sbjct: 257 KTGYQSV--ELAEVGPRMTMKLFQIRGGTLEKDSGGELEWALSQYTRTSRKKDYL 309
>gi|159131431|gb|EDP56544.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Aspergillus fumigatus A1163]
Length = 297
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 19/253 (7%)
Query: 40 MIKNKEKRSAVHAK---LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTR 96
M+ +E+R ++ + L+ EKR +LKA A K P+ + +
Sbjct: 1 MLVTRERRDYLYRRALLLRDASIAEKRAQLKASLATGKTL------DPSIANDKKLREDF 54
Query: 97 EPDETVCRPDD---DELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLS 152
+ DE++ P+ D +A D DE++ L G P+ ++TT R S R F E+
Sbjct: 55 KYDESLETPNKESKDTDYADLD-DEYA--LTSGIIDPRPIVTTSRSPSVRLGTFAKEIRL 111
Query: 153 VIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSK 212
++P S RG L ++ A T ++++H +R P A+ I LP GPTA F L
Sbjct: 112 LLPTSIRLNRGNLVLPDLVASANAAALTDMVLLHEHRGTPTAMTISHLPHGPTASFSLHN 171
Query: 213 LVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHN 269
+VLR DI N G + P L+ F T+LG RV ++++ LFP + G RVVTF N
Sbjct: 172 VVLRADIPNAARGTVSESYPHLIFEGFKTKLGLRVVQILKHLFPPREAGKVGNRVVTFVN 231
Query: 270 QRDFIFFRHHRCV 282
+ D I RHH V
Sbjct: 232 KEDNIEVRHHVFV 244
>gi|225683334|gb|EEH21618.1| U3 small nucleolar ribonucleoprotein IMP4 [Paracoccidioides
brasiliensis Pb03]
Length = 304
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 126/268 (47%), Gaps = 24/268 (8%)
Query: 42 KNKEKRSAVHAK---LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
+ +E+R ++ K L+ EKR KL+A A+ K P+ +T+ +
Sbjct: 5 QARERRDYLYRKALLLRDASIAEKRAKLRASLASGK------PLDPSVANDKTLREDFKY 58
Query: 99 DETVCRPDDDELFAGNDADEFSS------ILKQGCA-PKILITTCRFNSNRGPAFISELL 151
DE++ P +L N D +L G P+ LITT R S R F E+
Sbjct: 59 DESL--PSSSKLGDANSKDSDLLDLDDEYVLTSGIVDPRPLITTSRSPSARLSTFAKEMR 116
Query: 152 SVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLS 211
+IP S RG + ++ AK + +IV+H +R P A+ I LP GPTA F L
Sbjct: 117 LLIPTSIRINRGNLVIPDLLASAKASALSDMIVLHEHRGTPTAITISHLPHGPTASFSLH 176
Query: 212 KLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR---RVVT 266
++LR DI N G + P L+ F T+LG RV ++++ +FP E G+ RVVT
Sbjct: 177 NVMLRADIPNSARGTVSESYPHLIFEGFTTKLGARVVKILKHIFPPR-EVNGKLGSRVVT 235
Query: 267 FHNQRDFIFFRHHRCVPLEFISCYMWTI 294
F N D I RHH V + S + +
Sbjct: 236 FENIEDSIEVRHHVFVKTGYQSVELAEV 263
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 390
KT Q V L E GPR T+KL ++ GT + GGE EW TSR++ +L
Sbjct: 252 KTGYQSV--ELAEVGPRMTMKLFQIRGGTLEKDSGGELEWALSQYTRTSRKKDYL 304
>gi|323453823|gb|EGB09694.1| hypothetical protein AURANDRAFT_71380 [Aureococcus anophagefferens]
Length = 449
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 4/170 (2%)
Query: 113 GNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 172
G+ DE++ L+ K+ + T R S+R F EL ++PN+ RG + +++
Sbjct: 71 GSLDDEYARTLRGERLAKVCVCTSRDPSSRLKQFAKELKHMVPNATRVNRGNTRVGDLVD 130
Query: 173 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI-PE 231
++ +FT +++VH R +PD L++ LP GPT +F LS VLR DI + P
Sbjct: 131 ATRRGEFTDLVMVHETRGQPDGLVVCHLPLGPTTYFTLSNCVLRHDIDAPPPFSSDAPPH 190
Query: 232 LVLNNF--ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
LV ++F RL R+ ++Q LFP P+ +RV TF+N D I FRHH
Sbjct: 191 LVFHDFDDGKRLAKRLKTVLQCLFP-VPKADAKRVCTFYNAADRISFRHH 239
>gi|71006196|ref|XP_757764.1| hypothetical protein UM01617.1 [Ustilago maydis 521]
gi|46097137|gb|EAK82370.1| hypothetical protein UM01617.1 [Ustilago maydis 521]
Length = 288
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 85/152 (55%), Gaps = 2/152 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P++L+TT R S++ F E+ + PNS RG Y + ++ A+ T ++V+H +
Sbjct: 83 PRVLVTTSRDPSSKLTQFAKEVRLLFPNSTRLNRGGYTVSDLVAAARSNGITDMVVLHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG-HIPELVLNNFATRLGHRVGR 247
R PDA+++ LP GPT F L +VLR ++ + P L+ N +++LG RV
Sbjct: 143 RGVPDAMVVSHLPHGPTLLFTLHNVVLRHEVSAQSSTVSEQYPHLIFENLSSKLGLRVQT 202
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+++ N DFI FRHH
Sbjct: 203 ALKHLFP-VPKPDSSRVMSWINNNDFISFRHH 233
>gi|242774713|ref|XP_002478496.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Talaromyces stipitatus ATCC 10500]
gi|218722115|gb|EED21533.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Talaromyces stipitatus ATCC 10500]
Length = 302
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 121/254 (47%), Gaps = 22/254 (8%)
Query: 42 KNKEKRSAVHAK---LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
+ +E+R ++ K L+ EKR KLKA A+ K P+ + + +
Sbjct: 5 QARERRDYLYRKALLLRDASIAEKRAKLKAALASGK------PLDPSIVNDSQLREDFKY 58
Query: 99 DETV------CRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLS 152
DE++ + DDE D D+ ++ P+ L+TT R S R F E+
Sbjct: 59 DESLPSGSSKGQGKDDEFM---DVDDEYALTSGLVDPRPLVTTSRSPSARLSTFAKEIRL 115
Query: 153 VIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSK 212
++P S RG L ++ A T ++++H +R P A+ I LP GPTA F L
Sbjct: 116 LLPTSIRLNRGNLVLPDLVSSANAAALTDMVLLHEHRGTPTAITISHLPHGPTASFSLHN 175
Query: 213 LVLRKDI--KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFH 268
++LR DI + G + P L+ F T+LG RV ++++ LFP + G RVVTF
Sbjct: 176 VMLRADIPDSSRGTVSESYPHLIFEGFTTKLGKRVVQILKHLFPPREGGGKLGNRVVTFR 235
Query: 269 NQRDFIFFRHHRCV 282
N+ D I RHH V
Sbjct: 236 NREDAIEVRHHVFV 249
>gi|340517425|gb|EGR47669.1| hypothetical protein TRIREDRAFT_22611 [Trichoderma reesei QM6a]
Length = 297
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 115/236 (48%), Gaps = 17/236 (7%)
Query: 54 LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAG 113
L+ + EKR KL+A A+ K P +++ + DE+ +++L
Sbjct: 20 LRDAEISEKRAKLRASLASGK------PLDPTIANDKSLRKDYQYDESRDLTTNEQLDLD 73
Query: 114 NDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEY 173
++ + S I+ P++L+TT R S R AF E+ ++P S RG L +++
Sbjct: 74 DEYAQLSGIVD----PRVLVTTSRDPSARLSAFAKEIRLLLPTSIRMNRGNLILPDLVKS 129
Query: 174 AKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPE 231
A+ + ++++H +R P AL I P GPT F L +VLR DI G + P
Sbjct: 130 AQSAGLSDMLLLHEHRGTPTALTISHFPHGPTVSFSLHNVVLRHDIPGSVRGTVSESYPH 189
Query: 232 LVLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
L+ + F TRLG RV ++++ LFP S G RVVTF N D I RHH V
Sbjct: 190 LIFDGFTTRLGERVVKVLKHLFPPREPITSKSKIGNRVVTFKNIDDSIEVRHHVFV 245
>gi|358388727|gb|EHK26320.1| hypothetical protein TRIVIDRAFT_73680 [Trichoderma virens Gv29-8]
Length = 297
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 117/236 (49%), Gaps = 17/236 (7%)
Query: 54 LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAG 113
L+ + EKR KL+A A+ K L+ P +++ + DE+ +++L
Sbjct: 20 LRDAEISEKRAKLRASLASGK-PLD-----PTIANDKSLRKDYQYDESRDLTTNEQLDLD 73
Query: 114 NDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEY 173
++ + S I+ P++L+TT R S R AF E+ ++P S RG L +++
Sbjct: 74 DEYAQLSGIVD----PRVLVTTSRDPSARLSAFAKEIRLLLPTSIRMNRGNLILPDLVKS 129
Query: 174 AKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPE 231
A+ + ++++H +R P AL I P GPT F L +VLR DI G + P
Sbjct: 130 AQSAGLSDMLLLHEHRGTPTALTISHFPHGPTVSFSLHNVVLRHDIPGSVRGTVSESYPH 189
Query: 232 LVLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
L+ + F TRLG RV ++++ LFP S G RVVTF N D I RHH V
Sbjct: 190 LIFDGFTTRLGERVVKVLKHLFPPREPITSKTKIGNRVVTFKNIDDSIEVRHHVFV 245
>gi|85101912|ref|XP_961234.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Neurospora
crassa OR74A]
gi|11595521|emb|CAC18315.1| probable component of the U3 small nucleolar ribonucleoprotein
[Neurospora crassa]
gi|28922776|gb|EAA31998.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Neurospora
crassa OR74A]
Length = 295
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
D D+ S L P+IL+TT R S+R F E+ ++P S RG L+ ++ A
Sbjct: 70 DIDDEYSELSGVIDPRILVTTSRDPSSRLGQFSKEIRLLLPTSVRLNRGNLVLEDLVGAA 129
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPEL 232
K ++ T ++++H +R P A+ I P GPT L +VLR DI G + P L
Sbjct: 130 KAQNLTDVVLLHEHRGVPTAMTISHFPHGPTLMVSLHNVVLRADIPKSIKGTVSESYPRL 189
Query: 233 VLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFI 287
+ F+T+LG RV ++++ LFP Q P G RV+TF N D I RHH V +
Sbjct: 190 IFEGFSTKLGERVVKILKHLFPPREPTQKPNV-GNRVITFVNNDDTIEVRHHVYVRTSYD 248
Query: 288 SCYM 291
S +
Sbjct: 249 SVEL 252
>gi|119495332|ref|XP_001264453.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Neosartorya fischeri NRRL 181]
gi|119412615|gb|EAW22556.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Neosartorya fischeri NRRL 181]
Length = 299
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 114/235 (48%), Gaps = 18/235 (7%)
Query: 63 RKKLKARDA--AEKRALELGEEPPARMTPRTIENTR---------EPDETVCRPDDDELF 111
R+ L RDA AEKRA + +I N + E ET + + D +
Sbjct: 15 RRALLLRDASIAEKRAQLKASLATGKTLDPSIANDKKLREDFKYDESLETPNKENKDTDY 74
Query: 112 AGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKI 170
A D DE++ L G P+ ++TT R S R F E+ ++P S RG L +
Sbjct: 75 ADLD-DEYA--LTSGIIDPRPIVTTSRSPSVRLGTFAKEIRLLLPTSIRLNRGNLVLPDL 131
Query: 171 IEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGH 228
+ A T ++++H +R P A+ I LP GPTA F L +VLR DI N G +
Sbjct: 132 VSSANAAALTDMVLLHEHRGTPTAMTISHLPHGPTASFSLHNVVLRADIPNAARGTVSES 191
Query: 229 IPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRCV 282
P L+ F T+LG RV ++++ LFP + G RVVTF N+ D I RHH V
Sbjct: 192 YPHLIFEGFKTKLGLRVVQILKHLFPPREAGKVGNRVVTFVNKEDNIEVRHHVFV 246
>gi|346326263|gb|EGX95859.1| U3 small nucleolar ribonucleoprotein IMP4 [Cordyceps militaris
CM01]
Length = 298
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 120/247 (48%), Gaps = 19/247 (7%)
Query: 63 RKKLKARDA--AEKRA-----LELGEE-PPARMTPRTIENTREPDETVCRPDDDELFAGN 114
R+ + RDA +EKRA L G+ P +++ + DE+ + +EL +
Sbjct: 16 RRAMLLRDAEISEKRAKMRSSLASGQPLDPTIANDKSLRKNYQYDESAEKTTAEELDLDD 75
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
+ + S I+ P+IL+TT R S R AF E+ ++P + RG L +++ A
Sbjct: 76 EYAQLSGIVD----PRILVTTSRDPSARLGAFAKEIRLLLPTAIRLNRGNLILPELVRSA 131
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 232
K + +I++H +R P A+ + +P GPT F L +VLR DI G + P L
Sbjct: 132 KSSGLSDVILLHEHRGTPTAMTLSHMPHGPTVSFSLHNVVLRHDIPGSVRGTVSESYPHL 191
Query: 233 VLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFI 287
+ + F T LG R+ ++++ +FP S G RVVTF N D I RHH V F
Sbjct: 192 IFDGFTTPLGKRIVKVLKHMFPPREAITSRNKMGSRVVTFKNIDDSIEVRHHVFVRTGFD 251
Query: 288 SCYMWTI 294
S + +
Sbjct: 252 SVELAEV 258
>gi|336472155|gb|EGO60315.1| hypothetical protein NEUTE1DRAFT_134364 [Neurospora tetrasperma
FGSC 2508]
Length = 295
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 119/244 (48%), Gaps = 21/244 (8%)
Query: 54 LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRP-DDDELFA 112
LK + EKR KL++ A+ K P + E ++ D V R ++D +
Sbjct: 20 LKEAEVAEKRAKLRSALASGK--------PLDPEIAKDKELRKDYDYDVSRDVNEDAIEI 71
Query: 113 GNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 172
++ E S ++ P+IL+TT R S+R F E+ ++P S RG L+ ++
Sbjct: 72 DDEYSELSGVID----PRILVTTSRDPSSRLGQFSKEIRLLLPTSVRLNRGNLVLEDLVG 127
Query: 173 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIP 230
AK ++ T ++++H +R P A+ I P GPT L +VLR DI G + P
Sbjct: 128 AAKAQNLTDVVLLHEHRGVPTAMTISHFPHGPTLMVSLHNVVLRADIPKSIKGTVSESYP 187
Query: 231 ELVLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLE 285
L+ F+T+LG RV ++++ LFP Q P G RV+TF N D I RHH V
Sbjct: 188 RLIFEGFSTKLGERVVKILKHLFPPREPTQKPNV-GNRVITFVNNDDTIEVRHHVYVRTS 246
Query: 286 FISC 289
+ S
Sbjct: 247 YDSV 250
>gi|440632948|gb|ELR02867.1| hypothetical protein GMDG_05799 [Geomyces destructans 20631-21]
Length = 381
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 119/249 (47%), Gaps = 18/249 (7%)
Query: 54 LKHQKKVEKRKKLKARDAAEK-RALELGEEPPARMTPRTIENTREPDETVCRPDDDELFA 112
L+ + EKR KL+A A K A E+ + R E+ + + ++EL
Sbjct: 103 LRDAETSEKRSKLRASLATGKPLAPEIANDKKLR------EDYKYDESRADLTANEELDL 156
Query: 113 GNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 172
++ + S I+ P++L+TT R S+R +F E+ ++P S RG L +I+
Sbjct: 157 DDEYAQLSGIVD----PRVLVTTSRDPSSRLSSFAKEIRLLLPTSIRLNRGNLVLGNLIQ 212
Query: 173 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIP 230
A+ + +I++H +R P A+ + P GPT F L +VLR DI N G + P
Sbjct: 213 SAQASGLSDMILLHEHRGTPTAMTLSHFPHGPTISFSLHNVVLRHDIPNSSRGTVSESYP 272
Query: 231 ELVLNNFATRLGHRVGRLIQSLFPQSPEFR-----GRRVVTFHNQRDFIFFRHHRCVPLE 285
L+ F +RLG R+ ++++ +FP G RVVTF N D I RHH V
Sbjct: 273 HLIFEGFTSRLGQRIVKILKHIFPPREAVTNRTKLGSRVVTFKNIEDTIEVRHHVFVKTG 332
Query: 286 FISCYMWTI 294
+ S + +
Sbjct: 333 YQSVELAEV 341
>gi|350294631|gb|EGZ75716.1| putative component of the U3 small nucleolar ribonucleoprotein
[Neurospora tetrasperma FGSC 2509]
Length = 281
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 120/246 (48%), Gaps = 21/246 (8%)
Query: 54 LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRP-DDDELFA 112
LK + EKR KL++ A+ K P + E ++ D V R ++D +
Sbjct: 6 LKEAEVAEKRAKLRSALASGK--------PLDPEIAKDKELRKDYDYDVSRDVNEDAIEI 57
Query: 113 GNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 172
++ E S ++ P+IL+TT R S+R F E+ ++P S RG L+ ++
Sbjct: 58 DDEYSELSGVID----PRILVTTSRDPSSRLGQFSKEIRLLLPTSVRLNRGNLVLEDLVG 113
Query: 173 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIP 230
AK ++ T ++++H +R P A+ I P GPT L +VLR DI G + P
Sbjct: 114 AAKAQNLTDVVLLHEHRGVPTAMTISHFPHGPTLMVSLHNVVLRADIPKSIKGTVSESYP 173
Query: 231 ELVLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLE 285
L+ F+T+LG RV ++++ LFP Q P G RV+TF N D I RHH V
Sbjct: 174 RLIFEGFSTKLGERVVKILKHLFPPREPTQKPNV-GNRVITFVNNDDTIEVRHHVYVRTS 232
Query: 286 FISCYM 291
+ S +
Sbjct: 233 YDSVEL 238
>gi|226469318|emb|CAX70138.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Schistosoma
japonicum]
Length = 298
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 120/249 (48%), Gaps = 36/249 (14%)
Query: 54 LKHQKKVEK----RKKLKARDAAE-------KRALELGEEPPARMTPRTIENTREPDET- 101
LK Q ++ + R+ ++ RDA K AL G+ P + ++ E D +
Sbjct: 2 LKRQARLRREFIYRRSIEVRDAQNEKKKEMLKAALAEGKTLPREIQEDALQLNEELDWSD 61
Query: 102 ------VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIP 155
V DD+ L+AG + P++++TT R S++ F EL +IP
Sbjct: 62 DGGEGVVTSQDDEYLWAGTED------------PRVVVTTSRSPSSKLKEFAKELRFLIP 109
Query: 156 NSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVL 215
N+ RG Y K ++E K T +++V+ +R PD L+I LP GPTA F L +
Sbjct: 110 NATKINRGNYLNKNLLEACLAKQITDVVIVNESRGVPDTLIISHLPFGPTAIFTLYNVRT 169
Query: 216 RKDIKNHGNPTG-----HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQ 270
R D++ G +G P + ++LG RV +++ LFP P+ +RVVT++ +
Sbjct: 170 RHDMETMGRGSGLKMPQTFPNHIFKGLNSKLGQRVRCILKHLFP-VPKDDSKRVVTWYEE 228
Query: 271 RDFIFFRHH 279
D I FRHH
Sbjct: 229 DDVICFRHH 237
>gi|327293654|ref|XP_003231523.1| U3 small nucleolar ribonucleoprotein IMP4 [Trichophyton rubrum CBS
118892]
gi|326466151|gb|EGD91604.1| U3 small nucleolar ribonucleoprotein IMP4 [Trichophyton rubrum CBS
118892]
Length = 304
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 121/251 (48%), Gaps = 18/251 (7%)
Query: 42 KNKEKRSAVHAK---LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
+ +E+R ++ K LK E+R KLK + A + L+ P+ R + +
Sbjct: 9 QARERRDYLYRKALQLKDASIAERRAKLK-QSLASGKPLD-----PSIANDRRLREDFKY 62
Query: 99 DETVCRPDDDELFAGN----DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVI 154
DE++ P D G D D+ ++ P+ L+TT R S+R F E+ ++
Sbjct: 63 DESL--PTGDSKAKGATEEIDIDDEYAVTSGLVDPRPLVTTSRDPSSRLSTFAKEIRLLM 120
Query: 155 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 214
P S RGT L ++ A + ++++H +R P A+ I LP GPTA F L +V
Sbjct: 121 PTSIRLNRGTLVLNDLVASASASALSDMVILHEHRGTPTAITISHLPHGPTASFSLHNVV 180
Query: 215 LRKDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQR 271
LR DI N G + P L+ F T+LG RV +++ LFP + G RVVTF N
Sbjct: 181 LRADIPNAARGTVSESYPHLIFEGFTTKLGKRVVQILSHLFPPREAGKVGSRVVTFKNIE 240
Query: 272 DFIFFRHHRCV 282
D I RHH V
Sbjct: 241 DSIEVRHHVFV 251
>gi|294936903|ref|XP_002781904.1| U3 small nucleolar ribonucleoprotein imp4, putative [Perkinsus
marinus ATCC 50983]
gi|239893028|gb|EER13699.1| U3 small nucleolar ribonucleoprotein imp4, putative [Perkinsus
marinus ATCC 50983]
Length = 292
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 123/253 (48%), Gaps = 55/253 (21%)
Query: 41 IKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDE 100
I NK KR + + +KK KR+ K R A R GEE +T TIE RE D
Sbjct: 40 IPNKWKRQELVGRQYREKKKVKRETRKQRQEARAR----GEEVDVPVT-TTIEMMREADV 94
Query: 101 TVCRPD-DDELFAGNDADEF----------SSILKQGCAP-------------------- 129
T+ P+ D+E+ A DEF S +L G A
Sbjct: 95 TMLPPEGDEEVRADERMDEFRHTFPTPPPTSEVLPLGQAAAGEDTPSTVPTTVEAGQDEG 154
Query: 130 ------------KILITTCR-FNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 176
KI++TT + S R I EL+ V+P Y+++ + + KI ++A
Sbjct: 155 EEEEEQREPVEPKIMLTTSMAYPSERSYGLIKELVEVVPGLQYFRKKHFPITKICDFANN 214
Query: 177 KDFTSIIVVHTNRR-EPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG---NPTGHIPEL 232
+ FT+++V+ +R+ EP +L I LP+GPT++++L+ L L D+K HG NP PEL
Sbjct: 215 RGFTAVVVLSEDRKHEPSSLHITSLPEGPTSYWRLTSLELGADMK-HGATCNPEDR-PEL 272
Query: 233 VLNNFATRLGHRV 245
+LN F TRLGHR+
Sbjct: 273 LLNGFGTRLGHRL 285
>gi|429853301|gb|ELA28382.1| u3 small nucleolar ribonucleoprotein imp4 [Colletotrichum
gloeosporioides Nara gc5]
Length = 293
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 113/237 (47%), Gaps = 16/237 (6%)
Query: 62 KRKKLKARDAAEKRALELGEEPPARMTPRTIEN--TREP------DETVCRPD---DDEL 110
+++ + RD +RAL L E A R E+ T +P ++ R D D+
Sbjct: 5 RKQSRQRRDYLHRRALTLQESAVADRRARLRESLATGKPLPVDIANDVRLRKDFSYDESA 64
Query: 111 FAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKI 170
A D+ L P++LITT R S+R F +L ++P + RGT L+ +
Sbjct: 65 EALQSLDDEYETLSGLQDPRVLITTSRSPSSRLQGFSKDLRLLMPTATVINRGTMTLQDL 124
Query: 171 IEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGH 228
+ A T I+ VH +R P AL I LP GPT F L + R+D+ N GN +
Sbjct: 125 VRVANATGLTDIVHVHEHRGTPSALTISHLPHGPTISFSLHNVKTRQDLPNALRGNISES 184
Query: 229 IPELVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHN-QRDFIFFRHHRCV 282
P L+ + F+T LG RV R++Q LFP S G R VTF + D I RHH V
Sbjct: 185 YPHLIFDGFSTGLGKRVQRVLQHLFPPRNSSMRAGNRTVTFKRLEDDSIEVRHHLYV 241
>gi|326469175|gb|EGD93184.1| U3 small nucleolar ribonucleoprotein IMP4 [Trichophyton tonsurans
CBS 112818]
gi|326479320|gb|EGE03330.1| U3 small nucleolar ribonucleoprotein IMP4 [Trichophyton equinum CBS
127.97]
Length = 300
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 120/249 (48%), Gaps = 14/249 (5%)
Query: 42 KNKEKRSAVHAK---LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
+ +E+R ++ K LK E+R KLK + A + L+ P+ R + +
Sbjct: 5 QARERRDYLYRKALQLKDASIAERRAKLK-QSLASGKPLD-----PSIANDRRLREDFKY 58
Query: 99 DETVCRPDDDELFAGN--DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPN 156
DE++ D A D D+ ++ P+ L+TT R S+R F E+ ++P
Sbjct: 59 DESLPAGDPKAKGAAEEIDIDDEYAVTSGLVDPRPLVTTSRDPSSRLSTFAKEIRLLMPT 118
Query: 157 SHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLR 216
S RGT L ++ A + ++++H +R P A+ I LP GPTA F L +VLR
Sbjct: 119 SIRLNRGTLVLNDLVASASASALSDMVILHEHRGTPTAITISHLPHGPTASFSLHNVVLR 178
Query: 217 KDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDF 273
DI N G + P L+ F T+LG RV +++ LFP + G RVVTF N D
Sbjct: 179 ADIPNAARGTVSESYPHLIFEGFTTKLGKRVVQILSHLFPPREAGKVGSRVVTFKNIEDS 238
Query: 274 IFFRHHRCV 282
I RHH V
Sbjct: 239 IEVRHHVFV 247
>gi|256082450|ref|XP_002577469.1| U3 small nucleolar ribonucleoprotein [Schistosoma mansoni]
gi|360044625|emb|CCD82173.1| putative u3 small nucleolar ribonucleoprotein [Schistosoma mansoni]
Length = 301
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 123/240 (51%), Gaps = 18/240 (7%)
Query: 54 LKHQKKVEK----RKKLKARDAAEKRALELGEEPP--ARMTPRTI-ENTREPDETVCRPD 106
LK Q ++ + R+ ++ RDA ++ ++ + +M P+ I E + +E + D
Sbjct: 5 LKRQARLRREFIYRRSIEVRDAENEKKKKMLKAALAEGKMLPKEIQEGALQLNEELDWSD 64
Query: 107 DD-ELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 164
D E A N DE+ L G P+++ITT R S++ F EL +IPN+ RG
Sbjct: 65 DGGEGVATNQDDEY---LWAGTEDPRVVITTSRSPSSKLKEFAKELRFLIPNAAKINRGN 121
Query: 165 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 224
Y K ++E K T +I+V+ +R PD L+I LP GPTA F L + R D++ G
Sbjct: 122 YLNKNLLEACLAKQITDVIIVNESRGVPDTLIISHLPFGPTAIFTLYNVRTRHDMETMGC 181
Query: 225 PTGH-----IPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
TG P + + LG RV +++ LFP P+ +RVVT++ + D I FRHH
Sbjct: 182 GTGAKMPQTYPNHIFKGLNSNLGQRVRCILKHLFP-VPKDDSKRVVTWYEEDDVICFRHH 240
>gi|315049713|ref|XP_003174231.1| U3 small nucleolar ribonucleoprotein IMP4 [Arthroderma gypseum CBS
118893]
gi|311342198|gb|EFR01401.1| U3 small nucleolar ribonucleoprotein IMP4 [Arthroderma gypseum CBS
118893]
Length = 300
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 120/249 (48%), Gaps = 14/249 (5%)
Query: 42 KNKEKRSAVHAK---LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
+ +E+R ++ K LK E+R KLK + A + L+ P+ R + +
Sbjct: 5 QARERRDYLYRKALQLKDASIAERRAKLK-QSLASGKPLD-----PSIANDRRLREDFKY 58
Query: 99 DETVCRPDDDELFAGNDAD--EFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPN 156
DE++ D A D D + ++ P+ L+TT R S+R F E+ ++P
Sbjct: 59 DESLPTGDPKAKGAAEDIDIDDEYAVTSGLVDPRPLVTTSRDPSSRLSTFAKEIRLLMPT 118
Query: 157 SHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLR 216
S RGT L ++ A + ++++H +R P A+ I LP GPTA F L +VLR
Sbjct: 119 SIRLNRGTLVLNDLVASASASALSDMVILHEHRGTPTAITISHLPHGPTASFSLHNVVLR 178
Query: 217 KDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDF 273
DI N G + P L+ F T+LG RV +++ LFP + G RVVTF N D
Sbjct: 179 ADIPNAARGTVSESYPHLIFEGFTTKLGKRVVQILSHLFPPREAGKVGSRVVTFKNIEDS 238
Query: 274 IFFRHHRCV 282
I RHH V
Sbjct: 239 IEVRHHVFV 247
>gi|68303297|gb|AAY89588.1| U3 small nucleolar ribonucleoprotein [Schistosoma mansoni]
Length = 303
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 105/203 (51%), Gaps = 12/203 (5%)
Query: 85 ARMTPRTI-ENTREPDETVCRPDDD-ELFAGNDADEFSSILKQGCA-PKILITTCRFNSN 141
+M P+ I E + +E + DD E A N DE+ L G P+++ITT R S+
Sbjct: 38 GKMLPKEIQEGALQLNEELDWSDDGGEGVATNQDDEY---LWAGTEDPRVVITTSRSPSS 94
Query: 142 RGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLP 201
+ F EL +IPN+ RG Y K ++E K T +I+V+ +R PD L+I LP
Sbjct: 95 KLKEFAKELRFLIPNAAKINRGNYLNKNLLEACLAKQITDVIIVNESRGVPDTLIISHLP 154
Query: 202 DGPTAHFKLSKLVLRKDIKNHGNPTGH-----IPELVLNNFATRLGHRVGRLIQSLFPQS 256
GPTA F L + R D++ G TG P + + LG RV +++ LFP
Sbjct: 155 FGPTAIFTLYNVRTRHDMETMGCGTGAKMPQTYPNHIFKGLNSNLGQRVRCILKHLFP-V 213
Query: 257 PEFRGRRVVTFHNQRDFIFFRHH 279
P+ +RVVT++ + D I FRHH
Sbjct: 214 PKNDSKRVVTWYEEDDVICFRHH 236
>gi|70995844|ref|XP_752677.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Aspergillus
fumigatus Af293]
gi|19577368|emb|CAD28449.1| probable imp4 protein [Aspergillus fumigatus]
gi|42820709|emb|CAF32022.1| imp4 protein, putative [Aspergillus fumigatus]
gi|66850312|gb|EAL90639.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Aspergillus fumigatus Af293]
Length = 299
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 113/235 (48%), Gaps = 18/235 (7%)
Query: 63 RKKLKARDA--AEKRALELGEEPPARMTPRTIENTR---------EPDETVCRPDDDELF 111
R+ L RDA AEKRA + +I N + E ET + D +
Sbjct: 15 RRALLLRDASIAEKRAQLKASLATGKTLDPSIANDKKLREDFKYDESLETPNKESKDTDY 74
Query: 112 AGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKI 170
A D DE++ L G P+ ++TT R S R F E+ ++P S RG L +
Sbjct: 75 ADLD-DEYA--LTSGIIDPRPIVTTSRSPSVRLGTFAKEIRLLLPTSIRLNRGNLVLPDL 131
Query: 171 IEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGH 228
+ A T ++++H +R P A+ I LP GPTA F L +VLR DI N G +
Sbjct: 132 VASANAAALTDMVLLHEHRGTPTAMTISHLPHGPTASFSLHNVVLRADIPNAARGTVSES 191
Query: 229 IPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRCV 282
P L+ F T+LG RV ++++ LFP + G RVVTF N+ D I RHH V
Sbjct: 192 YPHLIFEGFKTKLGLRVVQILKHLFPPREAGKVGNRVVTFVNKEDNIEVRHHVFV 246
>gi|336263128|ref|XP_003346345.1| hypothetical protein SMAC_07822 [Sordaria macrospora k-hell]
gi|380091673|emb|CCC10805.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 295
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 93/184 (50%), Gaps = 8/184 (4%)
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
D D+ S L P+IL+TT R S+R F E+ ++P S RG L+ ++ A
Sbjct: 70 DIDDEYSELSGVIDPRILVTTSRDPSSRLGQFSKEIRLLLPTSVRLNRGNLVLEDLVGAA 129
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPEL 232
K ++ T ++++H +R P A+ I P GPT L +VLR DI G + P L
Sbjct: 130 KAQNLTDVVLLHEHRGVPTAMTISHFPHGPTLMVSLHNVVLRADIPKSIKGTVSESYPRL 189
Query: 233 VLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFI 287
+ F T+LG RV ++++ LFP Q P G RV+TF N D I RHH V +
Sbjct: 190 IFEGFNTKLGERVVKILKHLFPPREATQKPNV-GNRVITFVNNDDTIEVRHHVYVRTSYD 248
Query: 288 SCYM 291
S +
Sbjct: 249 SVEL 252
>gi|302505948|ref|XP_003014931.1| hypothetical protein ARB_06690 [Arthroderma benhamiae CBS 112371]
gi|291178502|gb|EFE34291.1| hypothetical protein ARB_06690 [Arthroderma benhamiae CBS 112371]
Length = 304
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 113/235 (48%), Gaps = 11/235 (4%)
Query: 53 KLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFA 112
+LK E+R KLK + A + L+ P+ R + + DE++ D A
Sbjct: 23 QLKDASIAERRAKLK-QSLASGKPLD-----PSIANDRRLREDFKYDESLPVGDPKAKGA 76
Query: 113 GN--DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKI 170
D D+ ++ P+ L+TT R S+R F E+ ++P S RGT L +
Sbjct: 77 AEEIDIDDEYAVTSGLVDPRPLVTTSRDPSSRLSTFAKEIRLLMPTSIRLNRGTLVLNDL 136
Query: 171 IEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGH 228
+ A + ++++H +R P A+ I LP GPTA F L +VLR DI N G +
Sbjct: 137 VASASASALSDMVILHEHRGTPTAITISHLPHGPTASFSLHNVVLRADIPNAARGTVSES 196
Query: 229 IPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRCV 282
P L+ F T+LG RV +++ LFP + G RVVTF N D I RHH V
Sbjct: 197 YPHLIFEGFTTKLGKRVVQILSHLFPPREAGKVGSRVVTFKNIEDSIEVRHHVFV 251
>gi|350539031|ref|NP_001232356.1| putative U3 snoRNP protein 4 [Taeniopygia guttata]
gi|197127330|gb|ACH43828.1| putative U3 snoRNP protein 4 [Taeniopygia guttata]
Length = 290
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+++TT R S R F EL ++P + RG +L ++ + T ++V+H
Sbjct: 83 PKVMVTTSRDPSARLRLFAKELCLLLPGARRMNRGRAELGALVAACRAAGVTDLLVLHET 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD L + LP GPTAHF LS VLR+++ G P L+L + LG RVG +
Sbjct: 143 RGRPDGLTVSHLPHGPTAHFTLSGAVLRQEVGGLGGAPLAAPHLLLLRLDSTLGKRVGTI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P RRVVTF N+ D I R+H
Sbjct: 203 LKHLFP-VPRPDSRRVVTFANEDDVILVRNH 232
>gi|197127331|gb|ACH43829.1| putative U3 snoRNP protein 4 [Taeniopygia guttata]
gi|197127332|gb|ACH43830.1| putative U3 snoRNP protein 4 [Taeniopygia guttata]
gi|197127333|gb|ACH43831.1| putative U3 snoRNP protein 4 [Taeniopygia guttata]
Length = 290
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+++TT R S R F EL ++P + RG +L ++ + T ++V+H
Sbjct: 83 PKVMVTTSRDPSARLRLFAKELCLLLPGARRMNRGRAELGALVAACRAAGVTDLLVLHET 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PD L + LP GPTAHF LS VLR+++ G P L+L + LG RVG +
Sbjct: 143 RGRPDGLTVSHLPHGPTAHFTLSGAVLRQEVGGLGGAPLAAPHLLLLRLDSTLGKRVGTI 202
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P RRVVTF N+ D I R+H
Sbjct: 203 LKHLFP-VPRPDSRRVVTFANEDDVILVRNH 232
>gi|169763352|ref|XP_001727576.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Aspergillus
oryzae RIB40]
gi|238489243|ref|XP_002375859.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Aspergillus flavus NRRL3357]
gi|83770604|dbj|BAE60737.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698247|gb|EED54587.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Aspergillus flavus NRRL3357]
gi|391869661|gb|EIT78856.1| U3 small nucleolar ribonucleoprotein (snoRNP) component
[Aspergillus oryzae 3.042]
Length = 299
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 89/171 (52%), Gaps = 3/171 (1%)
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
D D+ ++ P+ ++TT R S R AF E+ ++P S RG L ++ A
Sbjct: 76 DLDDEYALTSGVVDPRPIVTTSRNPSVRLGAFAKEIRLLLPTSIRLNRGGLVLPDLVSSA 135
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 232
T ++++H +R P A+ I LP GPTA F L +VLR DI N G + P L
Sbjct: 136 NAAALTDMVLLHEHRGTPTAMTISHLPHGPTASFSLHNVVLRADIPNAARGTVSESYPHL 195
Query: 233 VLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRCV 282
V F T+LG RV ++++ LFP + G RVV+F N+ D I RHH V
Sbjct: 196 VFEGFKTKLGLRVVQILKHLFPPREAGKVGNRVVSFVNREDSIEVRHHVFV 246
>gi|302660354|ref|XP_003021857.1| hypothetical protein TRV_04034 [Trichophyton verrucosum HKI 0517]
gi|291185775|gb|EFE41239.1| hypothetical protein TRV_04034 [Trichophyton verrucosum HKI 0517]
Length = 304
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 119/249 (47%), Gaps = 14/249 (5%)
Query: 42 KNKEKRSAVHAK---LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
+ +E+R ++ K LK E+R KLK + A + L+ P+ R + +
Sbjct: 9 QARERRDYLYRKALQLKDASIAERRAKLK-QSLASGKPLD-----PSIANDRRLREDFKY 62
Query: 99 DETVCRPDDDELFAGN--DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPN 156
DE++ D A D D+ + P+ L+TT R S+R F E+ ++P
Sbjct: 63 DESLPVGDPKAKGAAEEIDIDDEYGVTSGLVDPRPLVTTSRDPSSRLSTFAKEIRLLMPT 122
Query: 157 SHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLR 216
S RGT L ++ A + ++++H +R P A+ I LP GPTA F L +VLR
Sbjct: 123 SIRLNRGTLVLNDLVASASASALSDMVILHEHRGTPTAITISHLPHGPTASFSLHNVVLR 182
Query: 217 KDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDF 273
DI N G + P L+ F T+LG RV +++ LFP + G RVVTF N D
Sbjct: 183 ADIPNAARGTVSESYPHLIFEGFTTKLGKRVVQILSHLFPPREAGKVGSRVVTFKNIEDS 242
Query: 274 IFFRHHRCV 282
I RHH V
Sbjct: 243 IEVRHHVFV 251
>gi|378734811|gb|EHY61270.1| brix-domain ribosomal biogenesis protein [Exophiala dermatitidis
NIH/UT8656]
Length = 296
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 114/232 (49%), Gaps = 15/232 (6%)
Query: 63 RKKLKARDA--AEKRALE----LGEEP--PARMTPRTIENTREPDETVCRPDDDELFAGN 114
R+ L+ RDA AEKR+L +P P+ + + + DE++ D +
Sbjct: 15 RRALQLRDARIAEKRSLLKKSLASGKPLDPSVANDKALRKDFKYDESL---DPEAAAVQE 71
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
D+ S+L P+ L+TT R S R F E+ ++P + RG L ++ A
Sbjct: 72 SIDDEYSMLSGLADPRPLVTTSRSPSTRLATFSKEVRLLLPTAIRLNRGNLILPNLLASA 131
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 232
K T I+++H +R P A+ I LP GPTA F L +VLR DI + G + P L
Sbjct: 132 KAAALTDIVLLHEHRGTPTAMTISHLPHGPTASFSLHNVVLRADIPDAARGTVSESYPHL 191
Query: 233 VLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
+ F TRLG RV ++++ LFP P G RVVTF N D I RHH V
Sbjct: 192 IFEGFTTRLGKRVVQILKHLFPPRDGPHKVGNRVVTFKNVDDSIEVRHHVFV 243
>gi|429862442|gb|ELA37092.1| u3 small nucleolar ribonucleoprotein imp4, partial [Colletotrichum
gloeosporioides Nara gc5]
Length = 296
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 115/235 (48%), Gaps = 17/235 (7%)
Query: 71 AAEKRALELGEE-PPARMTPRTIENTREPDETVCRPD---DDELFAGNDADEFSSILKQG 126
AA K AL G+ P+ +++ + DE+ RPD ++EL D D+ S L
Sbjct: 28 AALKSALASGKPLDPSIAKDKSLRKDYQYDES--RPDLTVNEEL----DLDDEYSQLSGI 81
Query: 127 CAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVH 186
P+IL+TT R S+R AF E+ ++P S RG L +++ K + ++++H
Sbjct: 82 QDPRILVTTSRDPSSRLAAFSKEIRLLLPTSVRLNRGNLILDDLVQSCKSNSLSDVVLLH 141
Query: 187 TNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHR 244
+R P A+ I LP GPT L +VLR DI G+ + P L+ F +RLG R
Sbjct: 142 EHRGVPTAITISHLPHGPTLSCSLHSVVLRHDIPGSIRGSVSEAYPHLIFEGFKSRLGQR 201
Query: 245 VGRLIQSLFPQSPEFR-----GRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTI 294
+ ++++ LFP G RVVTF N D I RHH V + S + +
Sbjct: 202 IVKILKHLFPPREPITNKTKIGNRVVTFVNNEDTIEVRHHVFVRTSYDSVELAEV 256
>gi|367025917|ref|XP_003662243.1| hypothetical protein MYCTH_2302653 [Myceliophthora thermophila ATCC
42464]
gi|347009511|gb|AEO56998.1| hypothetical protein MYCTH_2302653 [Myceliophthora thermophila ATCC
42464]
Length = 296
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 117/242 (48%), Gaps = 16/242 (6%)
Query: 54 LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAG 113
L+ + EKR KL+A A+ K L+ PA + + + D + DD L
Sbjct: 20 LRDAEIAEKRAKLRAALASGK-PLD-----PAIANDKQLRKDYDYDVSRDVAGDDSLDID 73
Query: 114 NDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEY 173
++ E S ++ P++L+TT R S+R +F E+ + P RG L ++
Sbjct: 74 DEYSELSGVVD----PRVLVTTSRDPSSRLMSFSKEVRLLFPTGIRLNRGNLVLPDLVRS 129
Query: 174 AKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPE 231
A+ + + ++++H +R P A+ I P GPT L +VLR DI G + P
Sbjct: 130 AQSERLSDVVLLHEHRGTPTAITISHFPHGPTLMASLHNVVLRADIPRSIKGTVSESYPH 189
Query: 232 LVLNNFATRLGHRVGRLIQSLF----PQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFI 287
L+ NF T LGHR+ ++++ LF P + + G RV+TF NQ D I RHH V +
Sbjct: 190 LIFENFTTPLGHRIVKILKHLFPPRDPTAGKNAGNRVITFVNQDDCIEVRHHVYVKTSYD 249
Query: 288 SC 289
S
Sbjct: 250 SV 251
>gi|46136827|ref|XP_390105.1| hypothetical protein FG09929.1 [Gibberella zeae PH-1]
Length = 298
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 118/238 (49%), Gaps = 24/238 (10%)
Query: 63 RKKLKARDA--AEKRA-----LELGEE-PPARMTPRTIENTREPDETVCRPD---DDELF 111
R+ L RDA +EKRA L G+ P +++ + DE+ RPD ++EL
Sbjct: 15 RRALLLRDAEISEKRAKLRSSLASGKPLDPTIANDKSLRKDYQYDES--RPDLTTNEELD 72
Query: 112 AGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII 171
++ + S I+ P++L+TT R S R AF E+ ++P + RG L ++
Sbjct: 73 LDDEYAQLSGIVD----PRVLVTTSRDPSARLAAFAKEIRLLLPTAVRLNRGNLILPDLV 128
Query: 172 EYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHI 229
A+ + +I++H +R P AL + P GPT F L +VLR DI G +
Sbjct: 129 RSAQSAGLSDVILLHEHRGTPTALTLSHFPHGPTVSFSLHNVVLRHDIPGSVRGTVSESY 188
Query: 230 PELVLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
P L+ + F +RLG R+ ++++ +FP S G RVVTF N D I RHH V
Sbjct: 189 PHLIFDGFTSRLGERIVKILKHVFPPREAITSKNKVGNRVVTFKNIEDSIEVRHHVFV 246
>gi|261201592|ref|XP_002628010.1| U3 small nucleolar ribonucleoprotein IMP4 [Ajellomyces dermatitidis
SLH14081]
gi|239590107|gb|EEQ72688.1| U3 small nucleolar ribonucleoprotein IMP4 [Ajellomyces dermatitidis
SLH14081]
gi|239611817|gb|EEQ88804.1| U3 small nucleolar ribonucleoprotein IMP4 [Ajellomyces dermatitidis
ER-3]
gi|327352929|gb|EGE81786.1| U3 small nucleolar ribonucleoprotein IMP4 [Ajellomyces dermatitidis
ATCC 18188]
Length = 304
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 127/265 (47%), Gaps = 18/265 (6%)
Query: 42 KNKEKRSAVHAK---LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
+ +E+R ++ K L+ EKR KLKA A+ K L+ P+ + + +
Sbjct: 5 QARERRDYLYRKALLLRDASIAEKRAKLKAALASGK-PLD-----PSVANDKILREDFKY 58
Query: 99 DE---TVCRPDDDELFAGN--DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSV 153
DE T +P D + D D+ ++ P+ LITT R S R F E+ +
Sbjct: 59 DESLPTSSKPGDPNSKDSDMLDLDDEYALTSGIVDPRPLITTSRSPSARLSTFAKEMRLL 118
Query: 154 IPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKL 213
IP S RG + ++ AK + +I++H +R P A+ + LP GPTA F L +
Sbjct: 119 IPTSIRINRGNLVIPDLLASAKASALSDMILLHEHRGTPTAITVSHLPYGPTASFSLHNV 178
Query: 214 VLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHN 269
+LR DI N G + P L+ F T+LG RV ++++ +FP ++ G RVVTF N
Sbjct: 179 MLRADIPNSARGTVSESYPHLIFEGFTTKLGARVVQILKHIFPPREANGKLGSRVVTFKN 238
Query: 270 QRDFIFFRHHRCVPLEFISCYMWTI 294
D I RHH V + S + +
Sbjct: 239 IEDSIEVRHHVFVKTGYQSVELAEV 263
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 390
KT Q V L E GPR T++L ++ GT + GGE EW TSR++ +L
Sbjct: 252 KTGYQSV--ELAEVGPRMTMRLFQIRGGTLEKDSGGEVEWALSQYTRTSRKKDYL 304
>gi|408397554|gb|EKJ76695.1| hypothetical protein FPSE_03106 [Fusarium pseudograminearum CS3096]
Length = 298
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 118/238 (49%), Gaps = 24/238 (10%)
Query: 63 RKKLKARDA--AEKRA-----LELGEE-PPARMTPRTIENTREPDETVCRPD---DDELF 111
R+ L RDA +EKRA L G+ P +++ + DE+ RPD ++EL
Sbjct: 15 RRALLLRDAEISEKRAKLRSSLASGKPLDPTIANDKSLRKDYQYDES--RPDLTTNEELD 72
Query: 112 AGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII 171
++ + S I+ P++L+TT R S R AF E+ ++P + RG L ++
Sbjct: 73 LDDEYAQLSGIVD----PRVLVTTSRDPSARLAAFAKEIRLLLPTAVRLNRGNLILPDLV 128
Query: 172 EYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHI 229
A+ + ++++H +R P AL + P GPT F L +VLR DI G +
Sbjct: 129 RSAQSAGLSDVVLLHEHRGTPTALTLSHFPHGPTVSFSLHNVVLRHDIPGSVRGTVSESY 188
Query: 230 PELVLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
P L+ + F +RLG R+ ++++ +FP S G RVVTF N D I RHH V
Sbjct: 189 PHLIFDGFTSRLGERIVKVLKHVFPPREAITSKNKVGNRVVTFKNIEDSIEVRHHVFV 246
>gi|342879016|gb|EGU80293.1| hypothetical protein FOXB_09220 [Fusarium oxysporum Fo5176]
Length = 298
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 119/238 (50%), Gaps = 24/238 (10%)
Query: 63 RKKLKARDA--AEKRA-----LELGEE-PPARMTPRTIENTREPDETVCRPD---DDELF 111
R+ L RDA +EKRA L G+ P+ +++ + DE+ RPD +++L
Sbjct: 15 RRALLLRDAEISEKRAKLRSSLASGKPLDPSIANDKSLRKDYQYDES--RPDLTTNEQLD 72
Query: 112 AGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII 171
++ + S I+ P++L+TT R S R AF E+ ++P + RG L ++
Sbjct: 73 LDDEYAQLSGIVD----PRVLVTTSRDPSARLSAFAKEIRLLLPTAVRLNRGNLILPDLV 128
Query: 172 EYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHI 229
A+ + ++++H +R P AL + P GPT F L +VLR DI G +
Sbjct: 129 RSAQSAGLSDVVLLHEHRGTPTALTLSHFPHGPTVSFSLHNVVLRHDIPGSVRGTVSESY 188
Query: 230 PELVLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
P L+ + F +RLG RV ++++ +FP S G RVVTF N D I RHH V
Sbjct: 189 PHLIFDGFTSRLGERVVKVLKHVFPPREAITSKNKVGNRVVTFKNIEDSIEVRHHVFV 246
>gi|355717134|gb|AES05834.1| brix domain containing 5 [Mustela putorius furo]
Length = 213
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q++ EK K + LG++ P + P+TI+N R
Sbjct: 55 SEIKNKQRRHLMFTRWKQQQRKEKLAIKKKLKKERE---ALGDKAPPKPVPKTIDNQRVY 111
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DETV P+D+E+ DEF+S + +PKILITT R +L +VIPNSH
Sbjct: 112 DETVVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSH 171
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLI 197
Y R LKKII +DFT +IV++ +R+ P+ L++
Sbjct: 172 VYYRRGLALKKIIPQCISRDFTDLIVINEDRKTPNGLIL 210
>gi|400597183|gb|EJP64918.1| brix domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 298
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 116/236 (49%), Gaps = 17/236 (7%)
Query: 54 LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAG 113
L+ + EKR K+++ A+ K L+ P +++ + DE+V ++L
Sbjct: 21 LRDAEISEKRAKMRSSLASGK-PLD-----PTIANDQSLRKDYQYDESVDTTTAEQLDLD 74
Query: 114 NDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEY 173
++ + S I+ P+IL+TT R S R AF E+ ++P + RG L +++
Sbjct: 75 DEYAQLSGIVD----PRILVTTSRDPSARLGAFAKEIRLLLPTAIRLNRGNLILPELVRS 130
Query: 174 AKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPE 231
AK + +IV+H +R P A+ + P GPT F L +VLR DI G + P
Sbjct: 131 AKASGLSDVIVLHEHRGTPTAMTLSHFPHGPTVSFSLHNVVLRHDIPGSVRGTVSESYPH 190
Query: 232 LVLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
L+ + F T LG RV ++++ +FP S G RVVTF N D I RHH V
Sbjct: 191 LIFDGFETPLGKRVVKVLKHIFPPREPITSKNKMGSRVVTFKNIDDSIEVRHHVFV 246
>gi|226486900|emb|CAX74527.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Schistosoma
japonicum]
Length = 298
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 95/184 (51%), Gaps = 18/184 (9%)
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
V DD+ L+AG + P++++TT R S++ F EL +IPN+
Sbjct: 67 VVTSQDDEYLWAGTED------------PRVVVTTSRSPSSKLKEFAKELRFLIPNATKI 114
Query: 161 KRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 220
RG Y K ++E K T +++V+ +R PD L+I LP GPTA F L + R D++
Sbjct: 115 NRGNYLNKNLLEACLAKQITDVVIVNESRGVPDTLIISHLPFGPTAIFTLYNVRTRHDME 174
Query: 221 NHGNPTG-----HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 275
G +G P + ++LG RV +++ LFP P+ +RVVT++ + D I
Sbjct: 175 TMGRGSGLKMPQTFPNHIFKGLNSKLGQRVRCILKHLFP-VPKDDSKRVVTWYEEDDVIC 233
Query: 276 FRHH 279
FRHH
Sbjct: 234 FRHH 237
>gi|302914532|ref|XP_003051155.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732093|gb|EEU45442.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 298
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 117/238 (49%), Gaps = 24/238 (10%)
Query: 63 RKKLKARDA--AEKRA-----LELGEE-PPARMTPRTIENTREPDETVCRPD---DDELF 111
R+ L RDA +EKRA L G+ P +++ + DE+ RPD +++L
Sbjct: 15 RRALLLRDAEISEKRAKLRSSLASGKPLDPTIANDKSLRKDYQYDES--RPDLTTNEQLD 72
Query: 112 AGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII 171
++ + S I+ P++L+TT R S R AF E+ ++P + RG L ++
Sbjct: 73 LDDEYAQLSGIVD----PRVLVTTSRDPSARLAAFAKEIRLLLPTAVRLNRGNLILPDLV 128
Query: 172 EYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHI 229
A+ + ++++H +R P A+ + P GPT F L +VLR DI G +
Sbjct: 129 RSAQSAGLSDVVLLHEHRGTPTAMTLSHFPHGPTISFSLHNVVLRHDIPGSVRGTVSESY 188
Query: 230 PELVLNNFATRLGHRVGRLIQSLFPQSPEFR-----GRRVVTFHNQRDFIFFRHHRCV 282
P L+ + F TRLG RV ++++ +FP G RVVTF N D I RHH V
Sbjct: 189 PHLIFDGFTTRLGERVVKILKHIFPPREAITAKNKVGNRVVTFKNIEDSIEVRHHVFV 246
>gi|171693711|ref|XP_001911780.1| hypothetical protein [Podospora anserina S mat+]
gi|170946804|emb|CAP73608.1| unnamed protein product [Podospora anserina S mat+]
Length = 296
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 118/241 (48%), Gaps = 18/241 (7%)
Query: 63 RKKLKARDA--AEKRA-LELGEEPPARMTPRTIENTR-----EPDETVCRPDDDELFAGN 114
RK + RDA +EKRA L + P ++T+ + D + +DD L +
Sbjct: 15 RKAVLLRDAEVSEKRAKLRAALASGKPLDPELAKDTQLRKDYDYDASRDVAEDDSLDIDD 74
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
+ E S ++ P+IL+TT R S+R +F E+ + P RG L +++ A
Sbjct: 75 EYSELSGVVD----PRILVTTSRDPSSRLMSFSKEIRLLFPTGIRLNRGNLVLPELVRSA 130
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPEL 232
+ + + +I++H +R P A+ I P GPT L +VLR DI G + P L
Sbjct: 131 QAEKLSDVILLHEHRGTPTAMTISHFPHGPTLMASLHNVVLRADIPRSIKGTVSESYPHL 190
Query: 233 VLNNFATRLGHRVGRLIQSLFP----QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFIS 288
+ + F T+LG R+ ++++ LFP + + G RV+TF NQ D I RHH V + S
Sbjct: 191 IFDGFTTKLGLRIVKILKHLFPPRDVTASKAAGNRVITFVNQDDCIEVRHHVYVRTSYDS 250
Query: 289 C 289
Sbjct: 251 V 251
>gi|115491921|ref|XP_001210588.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Aspergillus
terreus NIH2624]
gi|114197448|gb|EAU39148.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Aspergillus
terreus NIH2624]
Length = 299
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P+ ++TT R S R F E+ ++P S RG L ++ A T ++++H +
Sbjct: 90 PRPIVTTSRSPSVRLNTFAKEIRLLLPTSIRLNRGNLVLPDLVSSANAAALTDMVLLHEH 149
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVG 246
R P A+ I LP GPTA F L +VLR DI N G + P L+ F T+LG RV
Sbjct: 150 RGTPTAMTISHLPHGPTASFSLHNVVLRADIPNAARGTVSESYPHLIFEGFKTKLGARVV 209
Query: 247 RLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRCV 282
++++ LFP + G RVV+F N+ D I RHH V
Sbjct: 210 QILKHLFPPREAGKVGNRVVSFVNKEDSIEVRHHVFV 246
>gi|36938600|gb|AAQ86836.1| unknown protein [Ixodes scapularis]
Length = 184
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 92/159 (57%), Gaps = 3/159 (1%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + KLK +K +K K+L A+ K A LG++ P + PRTIENTREP
Sbjct: 17 SQIKNKKRRLEEYLKLKREK--QKLKRL-AQQKRRKEAKALGDDAPPKQVPRTIENTREP 73
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
D+T+ P+D+E+ DE ++ ++ PK+LITT R F EL IP++
Sbjct: 74 DDTMVDPEDEEVQLDEAMDEMAAYFRKEYTPKLLITTSDNPHRRTIKFCRELKQSIPDAE 133
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLI 197
+ R +KK +E A ++ ++ I +++ +RR P ++
Sbjct: 134 FRWRNRSRIKKTVEQAVERGYSDIAIINEDRRHPSKFVV 172
>gi|296423840|ref|XP_002841460.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637700|emb|CAZ85651.1| unnamed protein product [Tuber melanosporum]
Length = 308
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 125/261 (47%), Gaps = 21/261 (8%)
Query: 44 KEKRSAVHAK---LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRT-IENTREPD 99
+E+R ++ K L++ + EKR KLKA AL G+ P + + + D
Sbjct: 19 RERRDFIYRKQLELQNAQVAEKRSKLKA-------ALASGKPLPKEIVDDVQLRRDFKYD 71
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
E+ R D DE A DE+++ L PKILITT R S+R F E+ ++PNS
Sbjct: 72 ESRER-DGDE--AAQVDDEYAT-LSGIVDPKILITTSRDPSSRLLQFSKEIRLLLPNSIR 127
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
RG L + + +I++H +R P + I P GPTA F L +VLR DI
Sbjct: 128 LNRGNAVLPTLCASCLSTSTSDMILLHEHRGTPTSFTISHFPHGPTALFSLHNVVLRHDI 187
Query: 220 KN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR---GRRVVTFH-NQRDF 273
N G + P L+ F+T LG RV +++ LFP R G RVVTF + D+
Sbjct: 188 PNSSRGTVSESYPHLIFEGFSTPLGKRVVTILKHLFPPREAGRAKEGSRVVTFALTEGDY 247
Query: 274 IFFRHHRCVPLEFISCYMWTI 294
I RHH V + S + +
Sbjct: 248 ISVRHHVYVKTGYSSVELAEV 268
>gi|116197823|ref|XP_001224723.1| hypothetical protein CHGG_07067 [Chaetomium globosum CBS 148.51]
gi|88178346|gb|EAQ85814.1| hypothetical protein CHGG_07067 [Chaetomium globosum CBS 148.51]
Length = 296
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 11/188 (5%)
Query: 112 AGNDA----DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDL 167
AG+D+ DE+S L P++L+TT R S+R +F E+ + P RG L
Sbjct: 65 AGDDSLDIDDEYSE-LSGVVDPRVLVTTSRDPSSRLMSFSKEIRLLFPTGIRLNRGNLVL 123
Query: 168 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNP 225
+++ A+ + + +I++H +R P A+ I P GPT L +VLR DI G
Sbjct: 124 PELVRSAQSERLSDVILLHEHRGTPTAITISHFPHGPTLMASLHNVVLRADIPRSIKGTV 183
Query: 226 TGHIPELVLNNFATRLGHRVGRLIQSLFP----QSPEFRGRRVVTFHNQRDFIFFRHHRC 281
+ P L+ NF T LG R+ ++++ LFP + + G RV+TF NQ D I RHH
Sbjct: 184 SESYPHLIFENFQTPLGRRIVKVLKHLFPPRDATASKTAGNRVITFMNQDDCIEVRHHVY 243
Query: 282 VPLEFISC 289
V + S
Sbjct: 244 VRTSYDSV 251
>gi|322706854|gb|EFY98433.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Metarhizium
anisopliae ARSEF 23]
Length = 298
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 119/239 (49%), Gaps = 22/239 (9%)
Query: 54 LKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPD---DDEL 110
L+ + EKR KL+A A+ K L+ P+ +++ + DE+ PD +++L
Sbjct: 20 LRDAEVSEKRAKLRASLASGK-PLD-----PSIANDKSLRKDYQYDEST--PDLGVNEQL 71
Query: 111 FAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKI 170
++ + S I+ P++L++T R S R AF E+ ++P S RG L +
Sbjct: 72 DLDDEYAQLSGIVD----PRVLVSTSRDPSARLSAFAKEIRLLLPTSIRMNRGNLILPDL 127
Query: 171 IEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGH 228
++ A+ + I+++H +R P AL + P GPT F L +VLR DI G +
Sbjct: 128 VKSAQSAGLSDIVLLHEHRGTPTALTLSHFPHGPTVSFSLHNVVLRHDIPGSVRGTVSES 187
Query: 229 IPELVLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
P L+ + F + LG R+ ++++ LFP S G RVVTF N D I RHH V
Sbjct: 188 YPHLIFDGFTSPLGKRIVKVLKHLFPPREAITSKNKMGNRVVTFKNIEDSIEVRHHVFV 246
>gi|164429072|ref|XP_957290.2| hypothetical protein NCU00404 [Neurospora crassa OR74A]
gi|157072398|gb|EAA28054.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 410
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 22/165 (13%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 182
PKIL+TT + A ++ ++ PNS Y +R Y +++I ++AK + +T +
Sbjct: 190 PKILVTTHLNGTIHKEA--EDIAAIFPNSTYIRRSAHAYGHKYSVREIAKFAKNRGYTIL 247
Query: 183 IVVHTNRREPDALLIIGL-----PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNF 237
++V + ++P +L +I L GP+ + + + K + HGNPT H
Sbjct: 248 MIVGEDLKKPSSLTVIHLNGEDVAPGPSLTYTIRNYLPGKALLGHGNPTNHY-------- 299
Query: 238 ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
T LG + + ++FP PE GR+VVT HNQRD+IFFR HR V
Sbjct: 300 -TPLGILAAKSMHTMFPPRPELSGRQVVTLHNQRDYIFFRRHRYV 343
>gi|256082452|ref|XP_002577470.1| U3 small nucleolar ribonucleoprotein [Schistosoma mansoni]
gi|360044626|emb|CCD82174.1| putative u3 small nucleolar ribonucleoprotein [Schistosoma mansoni]
Length = 255
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 125/247 (50%), Gaps = 19/247 (7%)
Query: 54 LKHQKKVEK----RKKLKARDAAEKRALELGEEPP--ARMTPRTI-ENTREPDETVCRPD 106
LK Q ++ + R+ ++ RDA ++ ++ + +M P+ I E + +E + D
Sbjct: 5 LKRQARLRREFIYRRSIEVRDAENEKKKKMLKAALAEGKMLPKEIQEGALQLNEELDWSD 64
Query: 107 DD-ELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 164
D E A N DE+ L G P+++ITT R S++ F EL +IPN+ RG
Sbjct: 65 DGGEGVATNQDDEY---LWAGTEDPRVVITTSRSPSSKLKEFAKELRFLIPNAAKINRGN 121
Query: 165 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 224
Y K ++E K T +I+V+ +R PD L+I LP GPTA F L + R D++ G
Sbjct: 122 YLNKNLLEACLAKQITDVIIVNESRGVPDTLIISHLPFGPTAIFTLYNVRTRHDMETMGC 181
Query: 225 PTGH-----IPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
TG P + + LG RV +++ LFP P+ +RVVT++ + D I FR
Sbjct: 182 GTGAKMPQTYPNHIFKGLNSNLGQRVRCILKHLFP-VPKDDSKRVVTWYEEDDVICFRLE 240
Query: 280 RCVPLEF 286
C+ +F
Sbjct: 241 -CLLCDF 246
>gi|322701173|gb|EFY92924.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Metarhizium
acridum CQMa 102]
Length = 298
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
D D+ + L P++L++T R S R AF E+ ++P S RG L +++ A
Sbjct: 72 DLDDEYAQLSGIVDPRVLVSTSRDPSARLSAFAKEIRLLLPTSIRMNRGNLILPDLVKSA 131
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 232
+ + I+++H +R P AL + P GPT F L +VLR DI G + P L
Sbjct: 132 QSAGLSDIVLLHEHRGTPTALTLSHFPHGPTVSFSLHNVVLRHDIPGSVRGTVSESYPHL 191
Query: 233 VLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
+ + F + LG R+ ++++ LFP S G RVVTF N D I RHH V
Sbjct: 192 IFDGFTSPLGKRIVKVLKHLFPPREAITSKNKMGNRVVTFKNIEDSIEVRHHVFV 246
>gi|426220648|ref|XP_004004526.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Ovis
aries]
Length = 294
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 85/154 (55%), Gaps = 4/154 (2%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI--PELVLN-NFATRLGHRV 245
R P L++ LP GPTA+F L +V+R D+ + G+ + P L+ A G V
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDVPDLGSVSNKFRAPNLIFRGLGAGGWGLGV 202
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ LFP P+ RRV+TF NQ D+I FRHH
Sbjct: 203 SDILRYLFP-VPKDDSRRVITFANQDDYISFRHH 235
>gi|345569733|gb|EGX52562.1| hypothetical protein AOL_s00007g550 [Arthrobotrys oligospora ATCC
24927]
Length = 277
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 6/170 (3%)
Query: 117 DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 175
DE++++ G A PK+LITT R S+R F E+ + P S RG L ++
Sbjct: 75 DEYAAL--SGVAEPKLLITTSRDPSSRLMQFAKEMRLLFPTSIRLNRGNTVLPQLAASCL 132
Query: 176 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELV 233
+ ++++H +R P AL + P GPTA F L +VLR DI N G + P L+
Sbjct: 133 ATSISDLLLLHEHRGVPTALTVSHFPHGPTAMFSLHNVVLRHDIDNSARGTVSEAYPHLI 192
Query: 234 LNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH-NQRDFIFFRHHRCV 282
F+T LG RV +++ LFP + RVVTF + D+I RHH V
Sbjct: 193 FEGFSTPLGKRVVTILKHLFPPGVKKDSARVVTFALTEGDYISVRHHVYV 242
>gi|340914926|gb|EGS18267.1| putative U3 small nucleolar ribonucleoprotein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 297
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 91/181 (50%), Gaps = 6/181 (3%)
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
D D+ S L P++L+TT R S+R AF E+ + P + RG L ++ A
Sbjct: 72 DIDDEYSELSGIVDPRVLVTTSRDPSSRLMAFSKEIRLMFPTAIRLNRGNLILPDLVMSA 131
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPEL 232
+++ + II++H +R P A+ I P GPT L +VLR DI G + P L
Sbjct: 132 QRERLSDIILLHEHRGTPTAITISHFPHGPTLMASLHNVVLRADIPKSIKGTVSESYPHL 191
Query: 233 VLNNFATRLGHRVGRLIQSLF-PQSPEFR---GRRVVTFHNQRDFIFFRHHRCVPLEFIS 288
+ F T LG RV ++++ LF P+ P G RV+TF NQ D I RHH V + S
Sbjct: 192 IFEGFRTPLGQRVVKILKHLFPPRDPTNNAKSGNRVITFVNQDDCIEVRHHVYVRTNYNS 251
Query: 289 C 289
Sbjct: 252 V 252
>gi|367038937|ref|XP_003649849.1| hypothetical protein THITE_2108893 [Thielavia terrestris NRRL 8126]
gi|346997110|gb|AEO63513.1| hypothetical protein THITE_2108893 [Thielavia terrestris NRRL 8126]
Length = 296
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 91/181 (50%), Gaps = 6/181 (3%)
Query: 115 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 174
D D+ S L P++L+TT R S+R +F E+ + P + RG L ++ A
Sbjct: 71 DIDDEYSELSGVVDPRVLVTTSRDPSSRLMSFSKEVRLLFPTAIRLNRGNLVLPDLVRSA 130
Query: 175 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPEL 232
+ + + ++++H +R P A+ I P GPT L +VLR DI G + P L
Sbjct: 131 QSERLSDVVLLHEHRGTPTAITISHFPHGPTLMASLHNVVLRADIPRSIKGTVSESYPHL 190
Query: 233 VLNNFATRLGHRVGRLIQSLF----PQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFIS 288
+ NF T LG R+ ++++ LF P + + G RV+TF NQ D I RHH V + S
Sbjct: 191 IFENFKTPLGLRIVKILKHLFPPRDPTASKTAGNRVITFVNQDDCIEVRHHVYVRTSYNS 250
Query: 289 C 289
Sbjct: 251 V 251
>gi|31324545|ref|NP_081608.1| ribosome production factor 1 isoform 1 [Mus musculus]
gi|148680022|gb|EDL11969.1| brix domain containing 5, isoform CRA_b [Mus musculus]
Length = 212
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 90/159 (56%), Gaps = 3/159 (1%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q ++++KL A+ +K LG++ P + P+TI+N R
Sbjct: 55 SEIKNKQRRHLMFTRWKQQ---QRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVY 111
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P+D+E+ DEF+S + +PKILITT R +L +VIP+SH
Sbjct: 112 DETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSH 171
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLI 197
Y R LKKII +DFT +IV++ +R+ P L I
Sbjct: 172 VYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPSILWI 210
>gi|302422302|ref|XP_003008981.1| U3 small nucleolar ribonucleoprotein IMP4 [Verticillium albo-atrum
VaMs.102]
gi|261352127|gb|EEY14555.1| U3 small nucleolar ribonucleoprotein IMP4 [Verticillium albo-atrum
VaMs.102]
gi|346970143|gb|EGY13595.1| U3 small nucleolar ribonucleoprotein IMP4 [Verticillium dahliae
VdLs.17]
Length = 293
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P+IL+TT R S+R AF E+ + P S RG L ++ +K + ++++ +
Sbjct: 84 PRILVTTSRDPSSRLAAFSKEIRLLFPTSVRLNRGNLILPDLVMSSKTNGLSDLVLLSEH 143
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P AL + LP GPT F L +V+ +IK+ G + P L+ F + LG R+ +
Sbjct: 144 RGTPTALTVSHLPFGPTVSFSLHNVVMMAEIKSLGTVSEQYPHLIFEGFKSPLGKRIVTV 203
Query: 249 IQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTI 294
++ LFP S G RVVTF N+ D I RHH V + S + +
Sbjct: 204 LKHLFPPREPITSKNQVGSRVVTFVNEDDCIEVRHHVFVRTSYDSVELAEV 254
>gi|401411203|ref|XP_003885049.1| putative U3 small nucleolar ribonucleoprotein protein [Neospora
caninum Liverpool]
gi|325119468|emb|CBZ55021.1| putative U3 small nucleolar ribonucleoprotein protein [Neospora
caninum Liverpool]
Length = 254
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 21/190 (11%)
Query: 61 EKRKKLKARDAAEKRALELGEEPPA--------RMTPRTIENTREPDETVCRPDDDELFA 112
EK + L R K ALE G+ P ++ P +T DD+ +A
Sbjct: 20 EKARVLADRKKRLKEALESGKPVPTDLRGEAGQKLLPTLDLEDVNTAQTTSHIDDEYAYA 79
Query: 113 GNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 172
G + PK+++TT R S+R F+ EL +IPNS RG Y + ++E
Sbjct: 80 GVED------------PKVVLTTSRNPSSRLQQFVKELRLLIPNSQRINRGGYVVNDLVE 127
Query: 173 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPE 231
+ T +I++H +R +PDA+++ LP GP AHF LS + LR D+ + N + P
Sbjct: 128 LCRSNSVTDLIIIHEHRGQPDAMVVCHLPHGPAAHFNLSGVALRHDLPEKPANMSEAAPH 187
Query: 232 LVLNNFATRL 241
LV +NF +R+
Sbjct: 188 LVFHNFTSRV 197
>gi|402085800|gb|EJT80698.1| U3 small nucleolar ribonucleoprotein IMP4 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 296
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P++++TT R S R AF E+ ++P + RG L +++ + + ++++H
Sbjct: 84 PRVMVTTSRDPSARLAAFAKEIRLLLPTAIRLNRGNLILPELVRSVQAAGLSDVVLLHER 143
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVG 246
R P AL I +P GPT F L ++LR DI G + P L+ F +RLG RV
Sbjct: 144 RGTPTALTISHMPHGPTVSFSLHNVLLRHDIPGSVRGTVSEAYPHLIFEGFTSRLGQRVV 203
Query: 247 RLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
++++ LFP S RV+TF N D I RHH V
Sbjct: 204 KVLKHLFPPREPITSKTKMSNRVITFKNIDDVIEVRHHVFV 244
>gi|399950022|gb|AFP65678.1| ribosome production factor 1 [Chroomonas mesostigmatica CCMP1168]
Length = 188
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 86/150 (57%)
Query: 133 ITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREP 192
ITT S + I + L ++ S Y+KR + +K+I+ Y K K+ ++++ +
Sbjct: 11 ITTSSQPSKKLLYIIKDFLKILDGSKYFKRKKFKIKQILCYLKSKEIKTLLIFKEKKNWA 70
Query: 193 DALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSL 252
+ II + + + HF+L ++L+K+ +++ + + PE++L NF + G + L+++L
Sbjct: 71 YDIWIINMREKVSIHFQLKSILLKKNFQDNNDSVSYKPEIILKNFNNKTGKIIFFLLKNL 130
Query: 253 FPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
FP SP F+ R VV+F + + IFFR +R +
Sbjct: 131 FPFSPNFKNRNVVSFFYRNNLIFFRFYRYI 160
>gi|389640679|ref|XP_003717972.1| U3 small nucleolar ribonucleoprotein IMP4 [Magnaporthe oryzae
70-15]
gi|58257405|gb|AAW69324.1| U3 small nucleolar ribonucleoprotein-like protein [Magnaporthe
grisea]
gi|351640525|gb|EHA48388.1| U3 small nucleolar ribonucleoprotein IMP4 [Magnaporthe oryzae
70-15]
gi|440471032|gb|ELQ40069.1| U3 small nucleolar ribonucleoprotein IMP4 [Magnaporthe oryzae Y34]
gi|440490267|gb|ELQ69842.1| U3 small nucleolar ribonucleoprotein IMP4 [Magnaporthe oryzae P131]
Length = 295
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P++++TT R S R AF E+ ++P + RG L +++ + + I+++H
Sbjct: 83 PRVMVTTSRDPSARLAAFAKEIRLLLPTAIRLNRGNLILPELVRSVQAAGLSDIVLLHER 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVG 246
R P AL I +P GPT F L ++LR DI G + P LV + F ++LG R+
Sbjct: 143 RGTPTALTISHMPHGPTVSFSLHNVLLRHDIPGSVRGTVSEAYPHLVFDGFTSKLGQRIV 202
Query: 247 RLIQSLFPQSPEFRGR-----RVVTFHNQRDFIFFRHHRCV 282
++++ LFP + RV+TF N D I RHH V
Sbjct: 203 KVLKHLFPPREPITNKAKMSNRVITFKNIDDVIEVRHHVFV 243
>gi|387594753|gb|EIJ89777.1| hypothetical protein NEQG_00547 [Nematocida parisii ERTm3]
gi|387596399|gb|EIJ94020.1| hypothetical protein NEPG_00685 [Nematocida parisii ERTm1]
Length = 340
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 118/240 (49%), Gaps = 21/240 (8%)
Query: 87 MTPRTIENTREPDE-TVCRPDDDELFA---GNDADEFSSILKQGCAPKILITTCRFNSNR 142
+ P+ I N + D+ T D ++A G DEFS+ + +ITT R S+
Sbjct: 43 VVPKEIRNEIDEDKLTAEEALQDAIYAFESGEKEDEFSN-----TEARPIITTSRSPSDP 97
Query: 143 GPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 202
F L +++PN+ RG + ++++++ A K + T +I+V+ + P +L+I LP
Sbjct: 98 LVRFAKALKNILPNAEKLNRGKHMIQELVQGAIKNNHTDLIMVNEHSGVPSSLIISHLPH 157
Query: 203 GPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSP-EFRG 261
GPT +F + +I + P +V +NF T LG RV R++ SLFPQ P +
Sbjct: 158 GPTTYFSIH----HPNIDTEEPMSTAAPAVVFDNFTTPLGLRVKRILSSLFPQLPGREKP 213
Query: 262 RRVVTFHNQRDFIFFRHHRC------VPLEFISCYMWTILCSYLTSIMKAFCYYECRYIF 315
+R+V+F N+ D I F + V L+ I C +T+ + + Y E ++F
Sbjct: 214 KRMVSFINREDSILFTQFKTSFKQGEVELQKI-CPQFTLKLYEIRAGTLDMTYAEKEFVF 272
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 337 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
KTS ++ LQ+ P+FTLKL ++ GT D E E+V +P ++T+R++F+L
Sbjct: 232 KTSFKQGEVELQKICPQFTLKLYEIRAGTLDMTYAEKEFVFRPYLNTARKKFYL 285
>gi|149026183|gb|EDL82426.1| brix domain containing 5 [Rattus norvegicus]
Length = 216
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q++ EK K E+ AL G++ P + P+TI+N R
Sbjct: 55 SEIKNKQRRHLMFTRWKQQQRKEKLAAKKKL-KREREAL--GDKAPPKPVPKTIDNQRVY 111
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P+D+E+ DEF+S + +PKILITT R +L +VIP+SH
Sbjct: 112 DETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSH 171
Query: 159 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREP 192
Y R LKKII +DFT +IV++ +R+ P
Sbjct: 172 VYYRRGLALKKIIPQCIARDFTDLIVINEDRKTP 205
>gi|399949744|gb|AFP65401.1| U3 snoRNP protein, IMP4 [Chroomonas mesostigmatica CCMP1168]
Length = 211
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P I +TT RF S F E+ + PNS + RG++ +K++I T +I++H +
Sbjct: 6 PLIFVTTSRFPSLNLLKFTKEIRYIFPNSKFLNRGSFFIKRLITTCLYNQGTDLIMIHEH 65
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R PDA +I LP GP+A F + K + DIK G P L+++N + LG R+ +
Sbjct: 66 RGNPDAFVISHLPKGPSAFFCIKKFLFSFDIKKKGF-FHQSPNLIVDNLESPLGKRLSNI 124
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+ SLF P+ +R++TF + + I RHH
Sbjct: 125 LCSLF-CPPQRNSKRIITFSGKENHILVRHH 154
>gi|297850768|ref|XP_002893265.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339107|gb|EFH69524.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 273
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 96/189 (50%), Gaps = 15/189 (7%)
Query: 106 DDDELFAGNDADEFSSILKQGCAPKILIT---TCRFN--SNRGPAFISELLSVIPNSHY- 159
DDDEL+A + + +L PK LIT R+ RG E+LSV PNS Y
Sbjct: 26 DDDELWAEFEPEGIDRVLSGEIKPKTLITNYGVLRYRRFPQRGALIAKEMLSVFPNSTYI 85
Query: 160 -YKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRK 217
+K G + LK++I AK++ TS+++ TN D + I+ L +G A F + L+ R+
Sbjct: 86 KWKWGFSNSLKELIGIAKERACTSLVLARTNSDGYDEIRIVSLLNGAAAEFSVLNLIPRE 145
Query: 218 DIKNHGNPTGHI-PELVLNNFATRLGHRVGRLIQSLFPQSPEFRG------RRVVTFHNQ 270
DI + +P + PE+ + F + RLIQSLFP+ + R + F NQ
Sbjct: 146 DIPDQASPPIRLYPEVNMGLFTSPASVGAARLIQSLFPKVTDSGPRNGACRRNIAFFQNQ 205
Query: 271 RDFIFFRHH 279
+ I +RH+
Sbjct: 206 KGCIHYRHY 214
>gi|7271067|emb|CAB77655.1| hypothetical protein [Candida albicans]
Length = 97
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 72/156 (46%), Gaps = 60/156 (38%)
Query: 235 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTI 294
NNF +RLG VGRL QS+FP PE +GR+V+T HNQRD+IFFR H
Sbjct: 2 NNFNSRLGKTVGRLFQSIFPHKPELQGRQVITLHNQRDYIFFRRH--------------- 46
Query: 295 LCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 354
RYIF +E G LQE GP+F
Sbjct: 47 -----------------RYIFRNEEKVG------------------------LQELGPQF 65
Query: 355 TLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
TLKL +Q G G+ W H+P+M+ +++F+L
Sbjct: 66 TLKLRRMQKGV----RGDVVWEHRPDMERDKKKFYL 97
>gi|344303772|gb|EGW34021.1| hypothetical protein SPAPADRAFT_59430, partial [Spathaspora
passalidarum NRRL Y-27907]
Length = 216
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 44 KEKRSAVHAK---LKHQKKVEKRKKLKARDAAEK-RALELGEEPPARMTPRTIENTREPD 99
+E+R ++ K L+ EKR++LKA A K + +L E+ +++ I + D
Sbjct: 7 RERREYLYRKALQLQESSLTEKRQQLKAALATGKPLSKDLAED--SKLQSDFIYDQSIQD 64
Query: 100 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
E D D+ S + PK++ITT R S R F E+ + PNS
Sbjct: 65 EV-------------DIDDEYSAMSGISDPKVIITTSRDPSVRLLQFSKEIKLMFPNSLK 111
Query: 160 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 219
RG Y + +++ + + +I++H +R P +L + P GPTA F L + LR D+
Sbjct: 112 LNRGNYVIPDLVKTCSRVAVSDVIILHEHRGVPTSLTVSHFPHGPTAVFTLHNVKLRHDL 171
Query: 220 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP 254
N GN + P L+ F + LG RV +++Q LFP
Sbjct: 172 PNLGNVSESYPHLIFEGFNSNLGKRVVKILQHLFP 206
>gi|156097881|ref|XP_001614973.1| U3 small nucleolar ribonucleoprotein protein [Plasmodium vivax
Sal-1]
gi|148803847|gb|EDL45246.1| U3 small nucleolar ribonucleoprotein protein, putative [Plasmodium
vivax]
Length = 347
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 8/264 (3%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P++LITT R S++ F E +IPNS RG+Y +K I+ +A+K + T +I++H
Sbjct: 81 PRVLITTSRNPSSQLECFAKEFKLLIPNSEKINRGSYFIKDILNFARKNNITDVIIIHEY 140
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH-GNPTGHIPELVLNNFATRLGHRVGR 247
+ P L+I LP GPT + +R + + G+ + P L+ +NF T LG R+
Sbjct: 141 KGIPRNLIICHLPFGPTLFCTIKDCKMRHEFTDQLGSVSSCNPHLIFHNFNTDLGKRIMS 200
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILC------SYLTS 301
+ + LFP +R V ++ + L+ S + TI L
Sbjct: 201 IFKYLFPPVKMRMNKRRVALSRRKGQRGASNEEQTDLQNNSGKVHTIDVGDDQEDDELQI 260
Query: 302 IMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 361
K Y++ + + + N + +TS++ I L E GPRF+ + +
Sbjct: 261 TFKNNEYFDLQKFENNRVITFFNKNDVIYFRHYNWETSEKGEIV-LNEVGPRFSFMVYKI 319
Query: 362 QHGTFDTKGGEFEWVHKPEMDTSR 385
T D+ ++E+V++P +++ +
Sbjct: 320 NKETVDSLNEDYEYVYRPFLNSRK 343
>gi|403418112|emb|CCM04812.1| predicted protein [Fibroporia radiculosa]
Length = 355
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 20/153 (13%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI++TT R S++ F K G E + D T ++++H +
Sbjct: 141 PKIIVTTSRDPSSKLQQFA-------------KAGDAS----PEACRANDVTDLVILHEH 183
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 246
R PDA+++ P GPT F L + LR DI ++ T P L+ NF + LG R+
Sbjct: 184 RGTPDAMIVSHFPHGPTVFFTLHNVNLRHDINSYKESTVSEQYPHLIFENFGSTLGERIR 243
Query: 247 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+++ LFP P+ +RV+TF N+ DFI FRHH
Sbjct: 244 DVLRYLFP-VPKEDSKRVMTFSNEDDFISFRHH 275
>gi|239790686|dbj|BAH71889.1| ACYPI008315 [Acyrthosiphon pisum]
Length = 187
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 72/131 (54%), Gaps = 7/131 (5%)
Query: 86 RMTPRTIENTREPDETVCRPDDDE-------LFAGNDADEFSSILKQGCAPKILITTCRF 138
+ PRTIENTREPD TV DD++ L A + DEF+ PK+LIT
Sbjct: 57 KQVPRTIENTREPDSTVLHSDDEDYDQKAQDLAAEFEHDEFADYYSHLYKPKVLITYKAK 116
Query: 139 NSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLII 198
+ F L ++PNS R K+ I+ A K +T +I+++ +R EP+ L+++
Sbjct: 117 PLRKVREFGKILTEIVPNSVRIFRRDASAKETIQAAINKGYTDLIIINEDRNEPNGLILV 176
Query: 199 GLPDGPTAHFK 209
LPDGPTA+F+
Sbjct: 177 HLPDGPTAYFR 187
>gi|297822547|ref|XP_002879156.1| hypothetical protein ARALYDRAFT_344625 [Arabidopsis lyrata subsp.
lyrata]
gi|297324995|gb|EFH55415.1| hypothetical protein ARALYDRAFT_344625 [Arabidopsis lyrata subsp.
lyrata]
Length = 225
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 83/163 (50%), Gaps = 23/163 (14%)
Query: 106 DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTY 165
DDD+L+AG D +E C P+ RGP ELLSV PNS Y G
Sbjct: 18 DDDKLWAGFDWEE------TECYPQ-----------RGPLIAKELLSVFPNSRYMIIGIR 60
Query: 166 D-LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 224
L+++I AK++ FTS+I+ HTN D L+II L +G +A F++ + N N
Sbjct: 61 SKLQEVIALAKRRRFTSLILTHTNSLGHDILIIISLLNGASAVFRVIDFIPH---LNCAN 117
Query: 225 PTG--HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 265
P PEL + +F ++ R+IQ+LFP+ P GR V
Sbjct: 118 PPSRPRYPELHMKSFNSQASVGTARMIQALFPKVPSSGGRPVA 160
>gi|355784806|gb|EHH65657.1| hypothetical protein EGM_02464 [Macaca fascicularis]
Length = 261
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 76/151 (50%), Gaps = 31/151 (20%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P A++ + +IV H
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPG-----------------AQRMNRVGLIVSH-- 123
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 124 -----------LPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 172
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
++ LFP P+ RV+TF NQ D+I FRHH
Sbjct: 173 LRYLFP-VPKDDSHRVITFANQDDYISFRHH 202
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 214 LTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 258
>gi|242094592|ref|XP_002437786.1| hypothetical protein SORBIDRAFT_10g002555 [Sorghum bicolor]
gi|241916009|gb|EER89153.1| hypothetical protein SORBIDRAFT_10g002555 [Sorghum bicolor]
Length = 50
Score = 84.3 bits (207), Expect = 8e-14, Method: Composition-based stats.
Identities = 42/51 (82%), Positives = 46/51 (90%), Gaps = 1/51 (1%)
Query: 172 EYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH 222
+YAK ++FTS+IVV TNRREPDALLIIGLPDGPTAHFKLSKLVL KDI H
Sbjct: 1 KYAKNRNFTSLIVV-TNRREPDALLIIGLPDGPTAHFKLSKLVLWKDINIH 50
>gi|224134983|ref|XP_002327538.1| predicted protein [Populus trichocarpa]
gi|222836092|gb|EEE74513.1| predicted protein [Populus trichocarpa]
Length = 86
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 54/75 (72%), Gaps = 5/75 (6%)
Query: 49 AVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDDD 108
AVHAKLK++ KVEK KKLKA+D EKRALELGEE PRTI+NT+E DETVC+PD++
Sbjct: 6 AVHAKLKYENKVEKHKKLKAQDVEEKRALELGEE-----IPRTIKNTKENDETVCKPDNE 60
Query: 109 ELFAGNDADEFSSIL 123
E+ + S +
Sbjct: 61 EVLTHSSCSAIESTI 75
>gi|238582199|ref|XP_002389857.1| hypothetical protein MPER_10962 [Moniliophthora perniciosa FA553]
gi|215452575|gb|EEB90787.1| hypothetical protein MPER_10962 [Moniliophthora perniciosa FA553]
Length = 175
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 59/98 (60%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S++ F E+ V PNSH RG Y +K++ E + D T +IV+H +
Sbjct: 75 PKIVITTSRDPSSKLLQFAKEVRLVFPNSHRVNRGNYVMKELAEACRANDVTDLIVLHEH 134
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT 226
R PDA+++ P GPT +F L+ + LR DI + + T
Sbjct: 135 RGVPDAMIVSHFPHGPTVYFTLNNVALRHDIATYKDST 172
>gi|221053526|ref|XP_002258137.1| u3 small nucleolar ribonucleoprotein protein. u3 small nucleolar
ribonucleoprotein protein [Plasmodium knowlesi strain H]
gi|193807970|emb|CAQ38674.1| u3 small nucleolar ribonucleoprotein protein,putative. u3 small
nucleolar ribonucleoprotein protein,putative [Plasmodium
knowlesi strain H]
Length = 348
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 13/150 (8%)
Query: 106 DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTY 165
DD+ F+G + P++LITT R S++ F E +IPNS RG+Y
Sbjct: 70 DDEYFFSGVEN------------PRVLITTSRNPSSQLECFAKEFKLLIPNSEKINRGSY 117
Query: 166 DLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH-GN 224
+K I+ +A+K + T +I++H + P L+I LP GPT + +R + + G+
Sbjct: 118 FIKDILNFARKNNITDVIIIHEYKGIPRNLIICHLPFGPTLFCTIKDCKMRHEFTDQLGS 177
Query: 225 PTGHIPELVLNNFATRLGHRVGRLIQSLFP 254
+ P L+ +NF T LG R+ + + LFP
Sbjct: 178 VSSCNPHLIFHNFNTDLGKRIMCIFKYLFP 207
>gi|320591910|gb|EFX04349.1| u3 small nucleolar ribonucleoprotein protein imp4 [Grosmannia
clavigera kw1407]
Length = 294
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 121/305 (39%), Gaps = 88/305 (28%)
Query: 103 CRPD---DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 159
RPD D++L D D+ + L P++L+TT R +S R AF E+ ++P S
Sbjct: 61 SRPDLNADEQL----DLDDEYAQLSGLVDPRVLVTTSRSSSTRLTAFSKEMRLLLPTSIR 116
Query: 160 YKRGTY-----DLKKII--EYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSK 212
RG DL + Y +D T N R I LP GPT F L
Sbjct: 117 LNRGNMILDDCDLCMLFPPNYLMYEDLTD------NGRS-----ISHLPHGPTVSFSLHN 165
Query: 213 LVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR-----RVV 265
+++R DI G+ + P L+ F +RLG+R+ ++++ LFP + RVV
Sbjct: 166 VLMRGDIPGSIRGSVSEAYPHLIFEGFTSRLGNRICKVLKHLFPPRDPITSKTKLSNRVV 225
Query: 266 TFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDA 325
F N D I RH Y++
Sbjct: 226 VFKNIEDVIELRH-----------YVYV-------------------------------- 242
Query: 326 NGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSR 385
KT+ KV L E GPR ++KL +++GT + K G EW TSR
Sbjct: 243 -----------KTAYDKV--ELSEVGPRMSMKLFEVRNGTLENKDGHVEWHLNQFTRTSR 289
Query: 386 RRFFL 390
++ +L
Sbjct: 290 KKDYL 294
>gi|70953050|ref|XP_745651.1| u3 small nucleolar ribonucleoprotein protein [Plasmodium chabaudi
chabaudi]
gi|56526042|emb|CAH75842.1| u3 small nucleolar ribonucleoprotein protein, putative [Plasmodium
chabaudi chabaudi]
Length = 345
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 107 DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD 166
DDE F FS I P++LITT R S + F EL +IPNS RG+Y
Sbjct: 70 DDEYF-------FSGIEN----PQVLITTSRNPSAQLENFAKELKLLIPNSEKINRGSYF 118
Query: 167 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT 226
+K II +A+K + T +I++H + P L+I LP GPT + +R + + N
Sbjct: 119 IKDIISFARKNNITDVIIIHEYKGVPRNLIICHLPFGPTLFCTIKDCKMRHEFLDQINNI 178
Query: 227 GHI-PELVLNNFATRLGHRVGRLIQSLFP 254
P L+ +NF + LG R+ + + LFP
Sbjct: 179 STCNPHLIFHNFNSDLGKRIMNIFKYLFP 207
>gi|82539297|ref|XP_724047.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478559|gb|EAA15612.1| Domain of unknown function, putative [Plasmodium yoelii yoelii]
Length = 344
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 13/150 (8%)
Query: 106 DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTY 165
DD+ F+G + P++LITT R S + F EL +IPNS RG+Y
Sbjct: 70 DDEYFFSGIEN------------PQVLITTSRNPSAQLENFAKELKLLIPNSEKINRGSY 117
Query: 166 DLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP 225
+K II +A+K + T +I++H + P L+I LP GPT + +R + + N
Sbjct: 118 FIKDIISFARKNNITDVIIIHEYKGIPRNLIICHLPFGPTLFCTIKDCKMRHEFLDQINN 177
Query: 226 TGHI-PELVLNNFATRLGHRVGRLIQSLFP 254
P L+ +NF + LG R+ + + LFP
Sbjct: 178 ISTCNPHLIFHNFNSDLGKRIMNIFKYLFP 207
>gi|124512408|ref|XP_001349337.1| U3 small nucleolar ribonucleoprotein protein, putative [Plasmodium
falciparum 3D7]
gi|23499106|emb|CAD51186.1| U3 small nucleolar ribonucleoprotein protein, putative [Plasmodium
falciparum 3D7]
Length = 362
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P++LITT R S+ F EL +IPNS RG+Y +K I+ +A+K + T +I++H
Sbjct: 81 PRVLITTSRNPSSTLENFAKELKLIIPNSEKINRGSYFIKDILNFARKNNITDVIILHEY 140
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH-GNPTGHIPELVLNNFATRLGHRVGR 247
+ P L+I LP GPT + +R + N + P L+ +NF + LG R+
Sbjct: 141 KGIPRNLIICHLPFGPTLFCTIKDCKMRCEFNEKIDNISLCTPHLIFHNFHSDLGKRIMN 200
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQR 271
+ + LFP +R + HN +
Sbjct: 201 IFKYLFPPVTMRTNKRKMPKHNSQ 224
>gi|348585861|ref|XP_003478689.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Cavia porcellus]
Length = 252
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 194 ALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLF 253
L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +++ LF
Sbjct: 109 GLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLIFHGFSSRLGRRVSDILRYLF 168
Query: 254 PQSPEFRGRRVVTFHNQRDFIFFRHH 279
P P+ RV+TF NQ D+I FRHH
Sbjct: 169 P-VPKDDSHRVITFANQDDYISFRHH 193
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 390
L E GPRF LKL ++ GT D + + EW P +TSR+R FL
Sbjct: 205 LTEVGPRFELKLYMIRLGTLDQEATADVEWRWHPYTNTSRKRLFL 249
>gi|221219430|gb|ACM08376.1| Ribosome production factor 1 [Salmo salar]
Length = 224
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 77/133 (57%), Gaps = 3/133 (2%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + KLK Q+K + + LK + E+ AL G++ P + P+TIEN R
Sbjct: 60 SEIKNKQRRHLMFMKLK-QEKRKLKVALKKKKKKERDAL--GDKAPPKEVPKTIENQRVY 116
Query: 99 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 158
DET P+D+E+ DEFS+ + PK+LITT R F ++L +VIP++H
Sbjct: 117 DETTVNPEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFCNQLATVIPDAH 176
Query: 159 YYKRGTYDLKKII 171
Y R LKK+I
Sbjct: 177 VYYRRGLALKKVI 189
>gi|56754817|gb|AAW25591.1| SJCHGC08420 protein [Schistosoma japonicum]
Length = 116
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 72/156 (46%), Gaps = 45/156 (28%)
Query: 239 TRLGHRVGRLIQSLFPQSPEFRGR---RVVTFHNQRDFIFFRHHRCVPLEFISCYMWTIL 295
TRLG R R++ LFP + R + FHNQRD+IFFRH+R + IS
Sbjct: 2 TRLGLRTERILSGLFPNDSRLLPQPHSRTIVFHNQRDYIFFRHYRYIHRNTIS------- 54
Query: 296 CSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 355
D N K K +++E + + E GP+FT
Sbjct: 55 --------------------------NDDGNENKTK-SRNEHIA-------MNEVGPKFT 80
Query: 356 LKLVSLQHGTFDTKGGEFEWVH-KPEMDTSRRRFFL 390
LKL S+Q GTFD++ G +EWV K E+ SRR F L
Sbjct: 81 LKLRSIQLGTFDSQFGNYEWVRKKTEIGRSRRTFVL 116
>gi|67586156|ref|XP_665169.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54655665|gb|EAL34938.1| hypothetical protein Chro.20022, partial [Cryptosporidium hominis]
Length = 171
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 78/137 (56%), Gaps = 7/137 (5%)
Query: 34 KEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIE 93
KEI IKNK KR+ + +LK +KK+EK K+ + EKR E+ + PRTIE
Sbjct: 40 KEIDLKNIKNKIKRAELANQLKREKKLEKSKRRRENREREKRGEEV-----VKGIPRTIE 94
Query: 94 NTREPDETVCRP--DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELL 151
NTRE DET +D EL + DEFS + +PK+LITT S F+ E++
Sbjct: 95 NTREIDETFVHDPLNDKELHKEMENDEFSDYFSRKRSPKLLITTNNRASKHMYNFLKEIV 154
Query: 152 SVIPNSHYYKRGTYDLK 168
S+IPN +YKR +++K
Sbjct: 155 SIIPNCDFYKRNGFNIK 171
>gi|449710270|gb|EMD49382.1| Brix domain containing protein [Entamoeba histolytica KU27]
Length = 297
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P + ITT + S++ F+ E+ +IPNS RG +K+++E + D T +I+VH N
Sbjct: 65 PNVFITTSKDPSSKLKEFVKEIKLIIPNSTRINRGNIQIKQLVETCRSHDVTDLIIVHEN 124
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 220
R EPD ++I P GPTA+F L +V R + K
Sbjct: 125 RGEPDGMIISHFPYGPTAYFGLYNVVSRHETK 156
>gi|183233009|ref|XP_001913789.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169801784|gb|EDS89434.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
Length = 297
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P + ITT + S++ F+ E+ +IPNS RG +K+++E + D T +I+VH N
Sbjct: 65 PNVFITTSKDPSSKLKEFVKEIKLIIPNSTRINRGNIQIKQLVETCRSHDVTDLIIVHEN 124
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 220
R EPD ++I P GPTA+F L +V R + K
Sbjct: 125 RGEPDGMIISHFPYGPTAYFGLYNVVSRHETK 156
>gi|62318955|dbj|BAD94054.1| putative U3 small nucleolar ribonucleoprotein [Arabidopsis
thaliana]
Length = 113
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 55/161 (34%)
Query: 230 PELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISC 289
P L+ NNF T++G RVG +++ +FP +P+ +R+VTF NQ D+I FR+H
Sbjct: 6 PHLIFNNFTTQMGQRVGNILKHIFP-APKLDAKRIVTFSNQSDYISFRNH---------- 54
Query: 290 YMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQE 349
+++ E G K+ + K E
Sbjct: 55 ------------------------VYDKGEG------GPKSIELK--------------E 70
Query: 350 CGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
GPRF L+L ++ GT + E EWV +P M+TS++R F+
Sbjct: 71 IGPRFELRLYQVKLGTVEQNEAEIEWVIRPYMNTSKKRKFI 111
>gi|197127334|gb|ACH43832.1| putative U3 snoRNP protein 4 [Taeniopygia guttata]
Length = 203
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+++TT R S R F EL ++P + RG +L ++ + T ++V+H
Sbjct: 83 PKVMVTTSRDPSARLRLFAKELCLLLPGARRMNRGRAELGALVAACRAAGVTDLLVLHET 142
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN-HGNP 225
R PD L + LP GPTAHF LS VLR+++ G P
Sbjct: 143 RGRPDGLTVSHLPHGPTAHFTLSGAVLRQEVGGLXGGP 180
>gi|388500378|gb|AFK38255.1| unknown [Medicago truncatula]
Length = 110
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 56/161 (34%)
Query: 230 PELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISC 289
P ++L+NF T+LG R +++ LFP P+ +R+VTF N+ D+I FRHH
Sbjct: 6 PHIILDNFETKLGERTANILKHLFP-VPKPDTKRIVTFANKSDYISFRHH---------- 54
Query: 290 YMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQE 349
I+E + S L+E
Sbjct: 55 ------------------------IYEKQAGPKS---------------------VELKE 69
Query: 350 CGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
GPRF L+L ++ GT D + EWV +P M+T+R+R FL
Sbjct: 70 IGPRFELRLYQIKLGTVDQAEAQTEWVIRPYMNTTRKRNFL 110
>gi|160331061|ref|XP_001712238.1| imp4 [Hemiselmis andersenii]
gi|159765685|gb|ABW97913.1| imp4 [Hemiselmis andersenii]
Length = 211
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 84/153 (54%), Gaps = 8/153 (5%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI ITT R S+ F +L ++ NS+ RG L +IE K T II++H +
Sbjct: 6 PKIFITTSRLPSSILIKFTKDLENIFSNSYKLCRGRKFLSNLIEICISKGGTDIILIHEH 65
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVL---RKDIKNHGNPTGHIPELVLNNFATRLGHRV 245
R PDAL+I LP GP+A+F + K+V + +N+ P P ++++N +++G R+
Sbjct: 66 RGVPDALVISHLPKGPSAYFTIKKVVFCPKKWKKRNNNLP----PHILIDNLNSQIGKRL 121
Query: 246 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
I S P F+ +R+++F + + I FRH
Sbjct: 122 CG-IFSSLFSFPSFKSKRIISFIGKNNQILFRH 153
>gi|76156308|gb|AAX27523.2| SJCHGC08273 protein [Schistosoma japonicum]
Length = 188
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 12/127 (9%)
Query: 101 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 160
V DD+ L+AG + P++++TT R S++ F EL +IPN+
Sbjct: 67 VVTSQDDEYLWAGTED------------PRVVVTTSRSPSSKLKEFAKELRFLIPNATKI 114
Query: 161 KRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 220
RG Y K ++E K T +++V+ +R PD L+I LP GPTA F L + R D++
Sbjct: 115 NRGNYLNKNLLEACLAKQITDVVIVNESRGVPDTLIISHLPFGPTAIFTLYNVRTRHDME 174
Query: 221 NHGNPTG 227
G +G
Sbjct: 175 TMGRGSG 181
>gi|19074991|ref|NP_586497.1| IMP4-LIKE U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN (snoRNP)
[Encephalitozoon cuniculi GB-M1]
gi|19069716|emb|CAD26101.1| IMP4-LIKE U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN (snoRNP)
[Encephalitozoon cuniculi GB-M1]
gi|449328663|gb|AGE94940.1| imp4-like U3 small nucleolar ribonucleoprotein [Encephalitozoon
cuniculi]
Length = 269
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 27/231 (11%)
Query: 56 HQKKVEKRKKL--KARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPD-----DD 108
+++K E+R+ L K R+ +K A EE R+ NT+ P E R D D+
Sbjct: 2 NRRKRERREYLLQKEREMLDKEA----EEKKRRLGEALESNTKIPHE--IRKDAPMLLDE 55
Query: 109 ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLK 168
++ G +E PK+++TT R S++ F ++ LS++ N + RG +
Sbjct: 56 IIYEGRIEEEHR-------LPKVMVTTSRSPSSQLLHF-AKHLSLVLNGENFIRGQLREE 107
Query: 169 KIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH 228
++ + A K +T +I+VH NR P +L + P GPT F + L + P
Sbjct: 108 EVSDVAHKYGYTCVIIVHENRGRPASLAVSYFPFGPTMRFTIIDHFLTR----RAFPLAP 163
Query: 229 IPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
V +N +G ++ + LFPQ R +R+V+ N+ D I FRH+
Sbjct: 164 KAYFVCDNMEGTVGIKIKEKMALLFPQCS--RAKRIVSLVNRNDTIAFRHY 212
>gi|154284099|ref|XP_001542845.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411025|gb|EDN06413.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 110
Score = 70.9 bits (172), Expect = 9e-10, Method: Composition-based stats.
Identities = 51/143 (35%), Positives = 61/143 (42%), Gaps = 38/143 (26%)
Query: 248 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFC 307
L +SLFP PE GR+VVT HNQRD+IF R H
Sbjct: 6 LFRSLFPPQPELEGRQVVTLHNQRDYIFVRRH---------------------------- 37
Query: 308 YYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 367
RY+F K G K+ K + V T LQE GPRFTLKL + G
Sbjct: 38 ----RYVFREKRETEKSVVGPDGKEMK----GVEGVRTGLQELGPRFTLKLRRIDKGIQR 89
Query: 368 TKGGEFEWVHKPEMDTSRRRFFL 390
G E+EW K M+ R +F L
Sbjct: 90 VSGQEWEW--KGGMEKQRTKFQL 110
>gi|357442331|ref|XP_003591443.1| hypothetical protein MTR_1g087510 [Medicago truncatula]
gi|355480491|gb|AES61694.1| hypothetical protein MTR_1g087510 [Medicago truncatula]
Length = 172
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 52/79 (65%), Gaps = 19/79 (24%)
Query: 32 MKKEILPSMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRT 91
MK+ + PSM KNKEKRS +HAK K ARDAA +RA+ELGEE +
Sbjct: 1 MKELLRPSMSKNKEKRSEIHAKSK------------ARDAAIERAIELGEE-------KN 41
Query: 92 IENTREPDETVCRPDDDEL 110
+ENTRE DET+C+PDD+E+
Sbjct: 42 LENTREVDETICKPDDEEV 60
>gi|303391621|ref|XP_003074040.1| U3 small nucleolar ribonucleoprotein [Encephalitozoon intestinalis
ATCC 50506]
gi|303303189|gb|ADM12680.1| U3 small nucleolar ribonucleoprotein [Encephalitozoon intestinalis
ATCC 50506]
Length = 273
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 106/259 (40%), Gaps = 67/259 (25%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI++TT R S++ F S+ LS++ N RG ++I + A K ++T +I++H N
Sbjct: 69 PKIMVTTSRSPSSQLLHF-SKHLSLVLNGENVIRGQLCEEEISDLAHKHEYTCVIIIHEN 127
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P AL + P GPT F + L + +P V +N +G ++
Sbjct: 128 RGRPSALAVSYFPFGPTMRFTIIDHFLTR----RSHPLSPKMYFVCDNMEGPVGIKIKEK 183
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCY 308
+ LFP+ +R+V+ N+ D I FRH
Sbjct: 184 MALLFPRCDG--AKRIVSLVNRNDTIAFRH------------------------------ 211
Query: 309 YECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT 368
Y+ E K +KT+ K + L+ ++ GTF+
Sbjct: 212 ----YLIE-----------------KGDKTTLSKSLG--------MDLRAYEIRKGTFEV 242
Query: 369 KGGEFEWVHKPEMDTSRRR 387
GEFEW +KP M++ R R
Sbjct: 243 -DGEFEWAYKPYMNSRRTR 260
>gi|429965577|gb|ELA47574.1| hypothetical protein VCUG_00897 [Vavraia culicis 'floridensis']
Length = 252
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 131 ILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR 190
+ +TT R S+R F ++ LS+I N+ RG+ +K++ E ++F +++V +
Sbjct: 67 VYVTTSRDPSSRLKQF-AKHLSLILNASSVTRGSMTIKELAE----QNFDVLVMVGESHG 121
Query: 191 EPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQ 250
+ ++L++ P GPT +F L + L K P L+L NF T +G ++ + +
Sbjct: 122 QANSLILTYFPYGPTFYFSLHNVRLLSRTK----PFSTKALLILENFGTDIGLKLKQNLS 177
Query: 251 SLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+FP +G+RVV FHN+ D I FRH+
Sbjct: 178 YMFPSVE--KGKRVVVFHNKDDIIRFRHY 204
>gi|401828284|ref|XP_003888434.1| brix domain-containing protein [Encephalitozoon hellem ATCC 50504]
gi|392999706|gb|AFM99453.1| brix domain-containing protein [Encephalitozoon hellem ATCC 50504]
Length = 269
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 81 EEPPARMTPRTIENTREPDETVCRPD-----DDELFAGNDADEFSSILKQGCAPKILITT 135
EE R+ NT+ P E R D D+ ++ G +E+ PK+++TT
Sbjct: 25 EEKKQRLGMALETNTKIPHE--IRKDAAALLDEIIYEGKIEEEYR-------YPKVMVTT 75
Query: 136 CRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDAL 195
R S++ F S+ LS++ + + RG ++I + A K +T +I+VH NR P +L
Sbjct: 76 SRNPSSQLLHF-SKQLSLVLDGENFIRGQLREEEISDVAHKHGYTCVIIVHENRGRPASL 134
Query: 196 LIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQ 255
+I P GPT F ++ I P V +N +G ++ + LFPQ
Sbjct: 135 VISYFPFGPTMKFT----IIDHFITRRAFPLSPKSYFVCDNMEGPIGKKIKERMALLFPQ 190
Query: 256 SPEFRGRRVVTFHNQRDFIFFRHH 279
+R+V+ N+ D I FRH+
Sbjct: 191 CSG--AKRIVSLVNRNDTIAFRHY 212
>gi|356605812|gb|AET24965.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 13 KK-2011]
Length = 146
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 162 RGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN 221
RG +++ + +D + +IV R +++ LP GPT F LS +V+R DI
Sbjct: 6 RGHXXXXXLVQACRAQDGSDLIVFTETRGXXGGMIVCXLPFGPTXFFTLSNVVMRHDIPE 65
Query: 222 HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
G P L+ ++LG R +++ LFP P+ +R++ F N D+I +RHH
Sbjct: 66 CGTMREQYPHLIFXKLDSKLGIRFXTILKXLFP-VPKRDSKRIMRFANTEDYISYRHH 122
>gi|259489086|tpe|CBF89065.1| TPA: U3 small nucleolar ribonucleoprotein protein IMP4, putative
(AFU_orthologue; AFUA_1G13070) [Aspergillus nidulans
FGSC A4]
Length = 144
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 81/200 (40%), Gaps = 60/200 (30%)
Query: 195 LLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSL 252
+ I LP GPTA F L +VLR DI N G + P L+ F T+LG RV ++++ L
Sbjct: 1 MTISHLPHGPTASFSLHNVVLRADIPNAARGTVSESYPHLIFEGFKTKLGKRVVQILKHL 60
Query: 253 FPQSPEFR-GRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYEC 311
FP + G RVVTF N+ D I RHH V +
Sbjct: 61 FPPREAGKVGNRVVTFVNKEDSIEVRHHVFVKTGY------------------------- 95
Query: 312 RYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD-TKG 370
KDA+ L E GPR T++L ++ G+ +
Sbjct: 96 -------------------KDAE------------LAEVGPRMTMRLFEIRGGSLEKGSS 124
Query: 371 GEFEWVHKPEMDTSRRRFFL 390
G+ EW TSR++ +L
Sbjct: 125 GDVEWALTQYTRTSRKKDYL 144
>gi|440493554|gb|ELQ76009.1| U3 small nucleolar ribonucleoprotein (snoRNP) component
[Trachipleistophora hominis]
Length = 252
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 131 ILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR 190
+ +TT R S+R F ++ LS+I N+ RG +K++ E ++F +++V +
Sbjct: 67 VYVTTSRDPSSRLKQF-AKHLSLILNATSVTRGNMTIKELAE----QNFDVLVMVGESHG 121
Query: 191 EPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQ 250
+ ++L++ P GPT +F L + L K P L+L NF+T +G ++ +
Sbjct: 122 QANSLILTYFPYGPTFYFSLHNVRLLSRTK----PFSTKALLILENFSTDIGLKLKESLS 177
Query: 251 SLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
+FP +G+R+V FHN+ D I FRH+
Sbjct: 178 YIFPSVE--KGKRIVVFHNKDDIIRFRHY 204
>gi|162606136|ref|XP_001713583.1| U3 snoRNP protein IMP4 [Guillardia theta]
gi|13794503|gb|AAK39878.1|AF165818_86 U3 snoRNP protein IMP4 [Guillardia theta]
Length = 207
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 106/257 (41%), Gaps = 61/257 (23%)
Query: 133 ITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREP 192
+TT R S +F +L+++ P S RG L +I Y + + +++V++ + P
Sbjct: 6 LTTSRNPSLNLISFTKKLINLFPQSKKINRGRKFLTSLISYCVENEVKNLLVIYELKGNP 65
Query: 193 DALLIIGLPDGPTAHFKLSK---LVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLI 249
+ L+I LP GP+ +FK+S L+ + DI +P L+++N T +G R+ ++I
Sbjct: 66 NCLIISHLPSGPSVYFKISNYNILIFKNDINIF---FSDLPILLISNLNTPIGSRISKII 122
Query: 250 QSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYY 309
+L+P+S +R++++ + I+C+
Sbjct: 123 TNLYPKSSN-NSKRIISYVGLSN--------------------NIVCN------------ 149
Query: 310 ECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTK 369
+Y+F+ K + +L+ GPRF L+ + G
Sbjct: 150 --QYLFQKKNYNNENM--------------------KLKNIGPRFFLRPFKIILGNISEI 187
Query: 370 GGEFEWVHKPEMDTSRR 386
EW+ + + RR
Sbjct: 188 NSNVEWIITTLIQSKRR 204
>gi|330038769|ref|XP_003239695.1| ribosome production factor 1 [Cryptomonas paramecium]
gi|327206619|gb|AEA38797.1| ribosome production factor 1 [Cryptomonas paramecium]
Length = 181
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 149 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 208
E L+V+PNSH++KR L +++ + KK ++++ R+ + + + F
Sbjct: 20 EFLNVVPNSHFFKRKQMGLARVLSFFIKKKIDNVLIFTEKRKNFFQVWHVNISRKAIIKF 79
Query: 209 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 268
K+ + +K +K PEL+ NF ++G+ LF P+F R+V+ F
Sbjct: 80 KIEHAIFKKKLK-FTRFFACRPELIFYNFEKKIGNLSSLFFCDLFENRPDFTKRQVIFFC 138
Query: 269 NQRDFIFFRHHR 280
R+ I FRH+R
Sbjct: 139 LSRNRILFRHYR 150
>gi|396082552|gb|AFN84161.1| U3 small nucleolar ribonucleoprotein [Encephalitozoon romaleae
SJ-2008]
Length = 310
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 7/151 (4%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK+++TT R S++ F S+ LS++ N + RG ++I + A K +T +++VH N
Sbjct: 110 PKVMVTTSRSPSSQLLHF-SKQLSLVLNGENFIRGQLCEEEISDVAHKHGYTCVVIVHEN 168
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
R P +L I P GPT F + L + P + +N +G +V
Sbjct: 169 RGRPASLAISYFPFGPTMRFTIIDHFLTR----RTFPLSPKVYFICDNMEGPVGIKVKER 224
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
I LFP+ +R+V+ N+ D I FRH+
Sbjct: 225 IALLFPKCSG--AKRIVSLVNRNDTIAFRHY 253
>gi|403223059|dbj|BAM41190.1| RNA processing factor [Theileria orientalis strain Shintoku]
Length = 153
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 73 EKRALELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKIL 132
EK+ LE+ R P TIE+ R PDET+ P+D E+ DEF+ K PK+L
Sbjct: 68 EKKGLEV-----IRSVPNTIESLRRPDETLVNPEDAEVKHEEKIDEFAEHFKGHRTPKLL 122
Query: 133 ITTCRFNSNRGPAFISELLSVIPNSHYYKRG 163
+T+ R S + F+ E+L VI N+ YY G
Sbjct: 123 VTSTRRPSEKMRTFMKEILLVINNTVYYAVG 153
>gi|195436145|ref|XP_002066033.1| GK19236 [Drosophila willistoni]
gi|194162118|gb|EDW77019.1| GK19236 [Drosophila willistoni]
Length = 154
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 59/193 (30%)
Query: 193 DALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSL 252
D L++ LP G TA F S +V+R I + G + L+ NNF + +G R ++++ L
Sbjct: 1 DGLVVCHLPYGHTAFFNTSDVVMRHAIPDIGKMSEQKHHLIFNNFKSTIGLRTVQILKQL 60
Query: 253 FPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECR 312
FP P+ +R++TF N D I F +++ +
Sbjct: 61 FP-VPKENSQRLITFLNHNDSII------------------------------FRHHQYK 89
Query: 313 YIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF-DTKGG 371
Y+ E L+E GPRF LKL ++ GT + K
Sbjct: 90 YVNRELE---------------------------LKEVGPRFQLKLYEIKLGTLENIKAA 122
Query: 372 EFEWVHKPEMDTS 384
+ +WV++P ++TS
Sbjct: 123 DSQWVNRPYLNTS 135
>gi|429961362|gb|ELA40907.1| hypothetical protein VICG_02047 [Vittaforma corneae ATCC 50505]
Length = 211
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
Query: 108 DELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDL 167
DE+ G +E PKI ITT S+ +F S+ +S+I N + RG
Sbjct: 52 DEIIYGTKEEE-----SMHLPPKIAITTSHTPSSFLKSF-SKHISLIFNGFHLMRGRMSE 105
Query: 168 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG 227
K++ EY ++ T +I++H + P ++L+ P+GPT F + + ++ K+ G
Sbjct: 106 KELSEYCITQEVTHLIILHETKGNPSSMLLCKYPNGPTYQFSIFNVKYQRRQKS----IG 161
Query: 228 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 278
LVL+ + G R+ + FP+ R+V F N+ I FRH
Sbjct: 162 EKAYLVLDGMDSEAGKRLKLNLSLCFPKV--LDASRLVAFINRNGTIAFRH 210
>gi|323307438|gb|EGA60712.1| Imp4p [Saccharomyces cerevisiae FostersO]
Length = 132
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 204 PTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRR 263
P F L +V+R DI N GN + P L+ +NF T LG RV +++ LF P+ R
Sbjct: 3 PXQQFSLHNVVMRHDIINAGNQSEVNPHLIFDNFTTALGKRVVCILKHLFNAGPKKDSER 62
Query: 264 VVTFHNQRDFIFFRHHRCV 282
V+TF N+ DFI R H V
Sbjct: 63 VITFANRGDFISVRQHVYV 81
>gi|238569252|ref|XP_002386612.1| hypothetical protein MPER_15075 [Moniliophthora perniciosa FA553]
gi|215439019|gb|EEB87542.1| hypothetical protein MPER_15075 [Moniliophthora perniciosa FA553]
Length = 118
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 62/174 (35%), Gaps = 91/174 (52%)
Query: 252 LFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYEC 311
+FP PEF+GR+VVT HNQRDF+FFR HR
Sbjct: 1 MFPALPEFQGRQVVTLHNQRDFLFFRRHR------------------------------- 29
Query: 312 RYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT------ 365
Y F + E LQE GPRFTLKL SL+ G
Sbjct: 30 -YAFRSTERVA------------------------LQEIGPRFTLKLRSLRKGIPAVQNY 64
Query: 366 --------FD---------------------TKGGEFEWVHKPEMDTSRRRFFL 390
FD K E+ W KPE++T+RR FFL
Sbjct: 65 GEDPRPLEFDKPDENGEAEETEASDSQKVVPPKQDEYLWKWKPELETTRRTFFL 118
>gi|328767922|gb|EGF77970.1| hypothetical protein BATDEDRAFT_20539 [Batrachochytrium
dendrobatidis JAM81]
Length = 389
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 103/225 (45%), Gaps = 32/225 (14%)
Query: 167 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI------- 219
+K + A + T +++ ++ L I +P GPT F +S L KD+
Sbjct: 62 IKDFVHVASQLSVTHMLIFSRSKTGEPNLRIGRIPRGPTLSFHISSYSLSKDVVSSQPSS 121
Query: 220 KNHGNPTGHIPELVLNNFATRLGH--RVGRLIQSLFP-----QSPEFRGRRVVTF--HNQ 270
K+ G P +VLNNFA H + ++Q++FP Q RRVV F +++
Sbjct: 122 KSFGVEFSKSPLVVLNNFAGDAKHIKLISTMVQNMFPAIRVQQMKISDARRVVIFNLNSE 181
Query: 271 RDFIFFRHHR-CVPLEFISCYMWTILCSYLTSI--MKAFCYYECRYIFETKESKGSDA-- 325
+ FRH++ V IS + T++ + + + K Y R F T ES DA
Sbjct: 182 TGRVEFRHYKIIVKTTGISKSVKTLIHTNVPDLKGYKDISDYVIRGAFST-ESDVEDATE 240
Query: 326 ------NGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 364
+ + KD S KTSQ+ + +L E GPR L+LV +Q G
Sbjct: 241 STVTLPDNYQPKD--SIKTSQRAI--KLIELGPRMELELVKIQGG 281
>gi|361125026|gb|EHK97088.1| putative Ribosome production factor 1 [Glarea lozoyensis 74030]
Length = 361
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 101/273 (36%), Gaps = 108/273 (39%)
Query: 128 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 181
APKIL+TT ++ A + L ++ P+S Y +R + + L++I ++A +++TS
Sbjct: 187 APKILLTTSINSTLHHEAEL--LCTLFPHSTYIRRSSHRYGHKFSLREISKFASNRNYTS 244
Query: 182 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 241
+I+ L++D K PTG L +
Sbjct: 245 VIL------------------------------LKEDAKT---PTG----LTI------- 260
Query: 242 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTS 301
PE +GR+VVT HNQRD+IF R H
Sbjct: 261 ---------------PELQGRQVVTLHNQRDYIFLRRH---------------------- 283
Query: 302 IMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 361
RY+F K G K + + + LQE GPRFTLKL +
Sbjct: 284 ----------RYVFRDKRETEKSVVGPDGKVVE----GVEGIRAGLQELGPRFTLKLRRV 329
Query: 362 QHGTFDTKGGE----FEWVHKPEMDTSRRRFFL 390
G G E +W K M+ R RF L
Sbjct: 330 DKG-IGRAGSEGDDAVQWQWKAHMEKQRTRFNL 361
>gi|357615303|gb|EHJ69585.1| U3 small nucleolar ribonucleoprotein imp4 [Danaus plexippus]
Length = 115
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKI+ITT R S R F+ EL + PNS RG Y++ ++I + D T IVVH +
Sbjct: 44 PKIMITTSREPSARLKMFVKELRLIFPNSQRMNRGGYEMSQLIHACRANDVTDFIVVHEH 103
Query: 189 RREPDALLII 198
R PD+L+ +
Sbjct: 104 RGIPDSLVTM 113
>gi|322780868|gb|EFZ10097.1| hypothetical protein SINV_16049 [Solenopsis invicta]
Length = 224
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 81 EEPPARMTPRTIENTREPDET--VCRPDDD---ELFAGNDADEFSSILKQGCAPKILITT 135
+E + P T+E+ RE DET V DD+ EL + DEF++ +Q PK+LIT
Sbjct: 107 QEGAPKQVPHTLESLREKDETMIVGSLDDEANKELKVDCEHDEFAAYYRQEYEPKVLITY 166
Query: 136 CRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREP 192
+ + F EL +IPNS R +KKI++ A ++FT +++V+ ++ +P
Sbjct: 167 ADNPNRKTRIFGRELTRIIPNSISLYRNRSGVKKIVKSATARNFTDVVIVNEDQCKP 223
>gi|330040288|ref|XP_003239838.1| U3 snoRNP protein, IMP4 [Cryptomonas paramecium]
gi|327206763|gb|AEA38940.1| U3 snoRNP protein, IMP4 [Cryptomonas paramecium]
Length = 215
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 130 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNR 189
KI+ITT + S FI +L + P SH RG LK +I + ++ ++I+V+ +
Sbjct: 13 KIIITTSKNPSRMSLNFIKKLNIIFPCSHRVNRGNLSLKSLIRFCIIQNVANLILVYQIK 72
Query: 190 REPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 242
+P ++I LP GPT FKL V+ ++ N + +V+ F + LG
Sbjct: 73 NKPSCMVIFHLPSGPTLFFKLFN-VITSAVEKKLNLSHQSTLVVIEGFGSPLG 124
>gi|397625470|gb|EJK67808.1| hypothetical protein THAOC_11107, partial [Thalassiosira oceanica]
Length = 122
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 230 PELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 279
P L+LNNF T+LG RVG +++ LFP P+ RRV+TF N D I FRHH
Sbjct: 13 PHLILNNFNTQLGRRVGNILKCLFP-IPKPDTRRVITFANDDDHISFRHH 61
>gi|402466223|gb|EJW01756.1| hypothetical protein EDEG_03723 [Edhazardia aedis USNM 41457]
Length = 213
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Query: 132 LITTCRFNSNRGP-AFISELLSVIPNSHYYKRGTYDLK-KIIEYAKKKDFTSIIVVHTNR 189
L+TT + SN+ +SEL +IPNS R +++ K+IE K F+ I + N
Sbjct: 7 LVTTSKEASNKKTLTLVSELSKIIPNSTVNPRDPHNVVVKVIE-QKGNPFSIQISANKNV 65
Query: 190 REPDALLIIG--------LPDGPTAHFKLSKLVLRKDIKNHGNPTGHI-PELVLNNFATR 240
IG + F++ + + + N +P+ H+ PELV NNF T
Sbjct: 66 SAEFCTNSIGDIINNSDVEENRSYVEFRIVEYRSMQQLNNKADPSSHLYPELVFNNFTTD 125
Query: 241 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
L ++ I +FP G RV +F + DFI+FR +R V
Sbjct: 126 LSSKIFEYISLVFPIVSTNLGNRVASFVAKNDFIYFRLYRYV 167
>gi|414871041|tpg|DAA49598.1| TPA: hypothetical protein ZEAMMB73_601835 [Zea mays]
Length = 253
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 48/104 (46%), Gaps = 24/104 (23%)
Query: 4 KRKKSEGEELLNEGEKENDKNNENISKKMKKEILPSMIKNKEKRSAVHAKLKHQKKVEKR 63
KRK+ L G++ K+ + LPS IKNK+K VHAKLK
Sbjct: 6 KRKQHPANSALPLGDEGEGICGRKARKEKAEATLPSQIKNKDKCREVHAKLKCL------ 59
Query: 64 KKLKARDAAEKRALELGEEPPARMTPRTIENTREPDETVCRPDD 107
+P R PRTIENTREPDETVC+PD+
Sbjct: 60 ------------------QPSERQVPRTIENTREPDETVCQPDE 85
>gi|160330981|ref|XP_001712198.1| Rpf1 [Hemiselmis andersenii]
gi|159765645|gb|ABW97873.1| Rpf1 [Hemiselmis andersenii]
Length = 208
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 67/118 (56%)
Query: 147 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 206
+ +LL +IP+S +K+ + L+ II Y K +F +I+ V ++ L + L +
Sbjct: 37 VKDLLYLIPHSKLFKKKNFKLQDIISYLKLHNFKNILFVKNEKKGSVFLWQLQLNLKISI 96
Query: 207 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 264
+K+ + +K+I N+ + + H PE++ NF +G + L++SLF P+F+GR+V
Sbjct: 97 LYKIVYFLPKKNILNNSSRSFHNPEIIFKNFKGNIGKSLCFLLKSLFSNYPDFKGRQV 154
>gi|77748191|gb|AAI06690.1| Unknown (protein for IMAGE:4203542), partial [Xenopus laevis]
Length = 328
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 198 IGLPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGH--RVGRL 248
+ LP GPT FK+++ L KD+ + H H P LVLNNF T+ H + +
Sbjct: 99 VRLPKGPTLSFKVTQYSLVKDVVSSLKKHRMHEEQFSHPPLLVLNNFGTQGMHVKLMATM 158
Query: 249 IQSLFPQSPEFRG-----RR--VVTFHNQRDFIFFRHH--RCVPLEFISCYMWTILCSYL 299
Q++FP + RR ++ ++++ + FRH+ + VP+ +S M +L
Sbjct: 159 FQNMFPSINVHKVTLNTIRRCILINYNDETQELEFRHYSLKVVPVG-MSKGMKKLLQEKF 217
Query: 300 TSIMK----AFCYYECRYIFETKESKGSDANGKKAKDA---KSEKTSQQKVITRLQECGP 352
++ + + + + E++ + D N + A + +QQ + RL E GP
Sbjct: 218 PNMSRWEDISELLVKGANLSESEAEQDGDHNITELPQACAGRGNMKAQQSAV-RLTEIGP 276
Query: 353 RFTLKLVSLQHGTFDTKGGEFEWVHKPE 380
R TL+LV ++ G D K ++ K E
Sbjct: 277 RMTLQLVKIEEGLSDGKVLYHNFIQKTE 304
>gi|339244461|ref|XP_003378156.1| ribosome production factor 1 [Trichinella spiralis]
gi|316972954|gb|EFV56599.1| ribosome production factor 1 [Trichinella spiralis]
Length = 110
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRF 388
L+E GPRFTL+L +LQ GTF+ K G+FEW+ K EM+TSRR +
Sbjct: 30 LKELGPRFTLRLKALQKGTFNPKFGQFEWILKRHEMETSRRSY 72
>gi|281201618|gb|EFA75827.1| brix domain-containing protein [Polysphondylium pallidum PN500]
Length = 426
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 113/244 (46%), Gaps = 42/244 (17%)
Query: 177 KDFTSI--------IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI------KNH 222
KDF ++ +V +N + I P GPT FK+++ L D+ +
Sbjct: 88 KDFVNVASLYGVTHLVAFSNTDIGTYVSIGKTPKGPTITFKVNQYSLVADVTKAKIKSST 147
Query: 223 GNPTGHI--PELVLNNFATRLGH--RVGRLIQSLFPQSPEF-----RGRRVVTF-HNQRD 272
+ ++ P +VLNNF + H + ++Q LFP + +R+V F +N+ D
Sbjct: 148 ASSLDYLTAPLVVLNNFTKGVPHLEMMSTMLQGLFPSINVLTLQLAKCKRIVLFNYNKED 207
Query: 273 -FIFFRHHRC-VPLEFISCYMWTILCSYLTSIMKA--FCYYECRYIFETKESKGSDAN-G 327
+ FRH++ V IS + ++ S + I K Y E+ ES DAN G
Sbjct: 208 GTVEFRHYKIRVAETGISKSIKRVIQSKVPDISKLDDISDYVLGGTGES-ESDYEDANEG 266
Query: 328 K-----KAKDAKSEKT--SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEF--EWVHK 378
K K D KS+KT S QK I +L+E GPR TL L+ ++ F KGG ++V K
Sbjct: 267 KIDIDSKFLDTKSKKTIQSNQKAI-KLEEIGPRMTLDLIKVEDDLF--KGGVLYHKFVSK 323
Query: 379 PEMD 382
E +
Sbjct: 324 TEQE 327
>gi|325652019|ref|NP_001191783.1| suppressor of SWI4 1 homolog b [Xenopus laevis]
gi|55249605|gb|AAH86267.1| Unknown (protein for MGC:81614) [Xenopus laevis]
Length = 600
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 27/198 (13%)
Query: 197 IIGLPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGH--RVGR 247
+ LP GPT FK+++ L KD+ + H H P LVLNNF T+ H +
Sbjct: 98 FVRLPKGPTLSFKVTQYSLVKDVVSSLKKHRMHEEQFSHPPLLVLNNFGTQGMHVKLMAT 157
Query: 248 LIQSLFPQSPEFRG-----RR--VVTFHNQRDFIFFRHH--RCVPLEFISCYMWTILCSY 298
+ Q++FP + RR ++ ++++ + FRH+ + VP+ +S M +L
Sbjct: 158 MFQNMFPSINVHKVTLNTIRRCILINYNDETQELEFRHYSLKVVPVG-MSKGMKKLLQEK 216
Query: 299 LTSIMK----AFCYYECRYIFETKESKGSDANGKKAKDA---KSEKTSQQKVITRLQECG 351
++ + + + + E++ + D N + A + +QQ + RL E G
Sbjct: 217 FPNMSRWEDISELLVKGANLSESEAEQDGDHNITELPQACAGRGNMKAQQSAV-RLTEIG 275
Query: 352 PRFTLKLVSLQHGTFDTK 369
PR TL+LV ++ G D K
Sbjct: 276 PRMTLQLVKIEEGLSDGK 293
>gi|71030730|ref|XP_765007.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351963|gb|EAN32724.1| hypothetical protein TP02_0441 [Theileria parva]
Length = 401
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 103/259 (39%), Gaps = 72/259 (27%)
Query: 177 KDFTSI--------IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH-GNP-- 225
+DFTS+ ++V + E L I LP GPT F+++K+ L DI H NP
Sbjct: 75 RDFTSVTDVLGLTHLIVLSQGSESSYLKIANLPSGPTFTFQINKVSLISDISKHYTNPQS 134
Query: 226 ---TGHIPELVLNNFA-----------------------TRLGHRVGRLIQSLFPQSPEF 259
+ + P LVLN F+ TR+ + ++I + + +
Sbjct: 135 FDSSNYSPLLVLNGFSKSSFKGSDEDETKDESSRFDKAMTRVTETLNKMIAPVDLSTTKI 194
Query: 260 RG-RRVVTFHNQRD-FIFFRHHRCVPLEFISCYMWTILCSYLT-----SIMKAFCYYE-- 310
+ +RVV FH Q+D I RH+ + + C + LT +++ +E
Sbjct: 195 QNCKRVVLFHKQKDGTIVLRHY---SINLVDCNTQAQVKDLLTRKTMKNLISETSDFEDI 251
Query: 311 -------------CRYIFETKE--------SKGSDANGKKAKDAKSEKTS--QQKVITRL 347
+ +T E S+ A K D + +TS + K+ RL
Sbjct: 252 TNMLSSDSTLSKNSNFDSDTDEIVELDNILSQNIIAKNKYGVDLEPSETSDTRNKIGIRL 311
Query: 348 QECGPRFTLKLVSLQHGTF 366
E GPR L L+ L++ F
Sbjct: 312 VEIGPRVQLTLIKLENDVF 330
>gi|213405721|ref|XP_002173632.1| brix domain-containing protein c [Schizosaccharomyces japonicus
yFS275]
gi|212001679|gb|EEB07339.1| brix domain-containing protein c [Schizosaccharomyces japonicus
yFS275]
Length = 390
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 105/266 (39%), Gaps = 45/266 (16%)
Query: 161 KRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI- 219
+R + LK I A T ++V+ + P L I P GPT HF++ +L KD+
Sbjct: 64 ERRSNKLKDYITMAGPLGVTHLLVLSRTEKSP-YLRFIRTPHGPTLHFRVVDYMLSKDLR 122
Query: 220 ---KNHGNPTGHI---PELVLNNFATRLGHR------VGRLIQSLFP----QSPEFRGRR 263
KN +PT P LV+N+F T+ + + Q+LFP QS R
Sbjct: 123 RMQKNPKSPTTEYLTPPLLVMNHFNTKSSKEAPHEALMSTMFQNLFPPLSVQSANINSVR 182
Query: 264 VVTFHNQRD--FIFFRHHRCV--PLEFISCYMWTILCSYLTSIMKAFCYYE--CRYIFET 317
V N+R+ I RH+ P+ + M + ++ +
Sbjct: 183 RVMLLNRREDGLIDVRHYIITMKPVGLSRPVKRLVKAQQNPGNMPDLHSVQDISDFVLKG 242
Query: 318 KESKGSDANGKKAKDAKSE-------------------KTSQQKVITRLQECGPRFTLKL 358
+ + G ++ + +DA E K QQ V +L E GPR TL L
Sbjct: 243 EGASGMASDSEVDEDATVEVDRPALPSSLGDLGDIDALKPRQQAV--KLVEVGPRMTLDL 300
Query: 359 VSLQHGTFDTKGGEFEWVHKPEMDTS 384
V + G D K + V K E +++
Sbjct: 301 VKVTEGVSDGKVLYHKLVQKTEKESA 326
>gi|325652017|ref|NP_001191782.1| suppressor of SWI4 1 homolog a [Xenopus laevis]
Length = 564
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 29/199 (14%)
Query: 197 IIGLPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGHRV---G 246
+ LP GPT FK+++ L KD+ + H H P LVLNNF T+ G +V
Sbjct: 98 FVRLPKGPTLSFKVTQYSLIKDVVSSLKKHRMHEEQFTHPPLLVLNNFGTQ-GMQVKLMA 156
Query: 247 RLIQSLFPQSPEFRG-----RR--VVTFHNQRDFIFFRHH--RCVPLEFISCYMWTILCS 297
+ Q++FP + RR ++ ++++ + FRH+ + VP+ +S M +L
Sbjct: 157 TMFQNMFPSINVHKVTLNTIRRCILINYNDETQQLEFRHYSLKVVPVG-MSKGMKKLLQE 215
Query: 298 YLTSIMK----AFCYYECRYIFETKESKGSDANGKKAKDA---KSEKTSQQKVITRLQEC 350
++ + + + + E++ + D N + A + +QQ + RL E
Sbjct: 216 KFPNMSRWEDISELLVKGANLSESEAEQDGDHNITELPQACAGRGNMKAQQSAV-RLTEI 274
Query: 351 GPRFTLKLVSLQHGTFDTK 369
GPR TL+LV ++ G D K
Sbjct: 275 GPRMTLQLVKIEEGLSDGK 293
>gi|28422433|gb|AAH44293.1| LOC398561 protein, partial [Xenopus laevis]
Length = 567
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 29/199 (14%)
Query: 197 IIGLPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGHRV---G 246
+ LP GPT FK+++ L KD+ + H H P LVLNNF T+ G +V
Sbjct: 101 FVRLPKGPTLSFKVTQYSLIKDVVSSLKKHRMHEEQFTHPPLLVLNNFGTQ-GMQVKLMA 159
Query: 247 RLIQSLFPQSPEFRG-----RR--VVTFHNQRDFIFFRHH--RCVPLEFISCYMWTILCS 297
+ Q++FP + RR ++ ++++ + FRH+ + VP+ +S M +L
Sbjct: 160 TMFQNMFPSINVHKVTLNTIRRCILINYNDETQQLEFRHYSLKVVPVG-MSKGMKKLLQE 218
Query: 298 YLTSIMK----AFCYYECRYIFETKESKGSDANGKKAKDA---KSEKTSQQKVITRLQEC 350
++ + + + + E++ + D N + A + +QQ + RL E
Sbjct: 219 KFPNMSRWEDISELLVKGANLSESEAEQDGDHNITELPQACAGRGNMKAQQSAV-RLTEI 277
Query: 351 GPRFTLKLVSLQHGTFDTK 369
GPR TL+LV ++ G D K
Sbjct: 278 GPRMTLQLVKIEEGLSDGK 296
>gi|300706614|ref|XP_002995558.1| hypothetical protein NCER_101508 [Nosema ceranae BRL01]
gi|239604713|gb|EEQ81887.1| hypothetical protein NCER_101508 [Nosema ceranae BRL01]
Length = 266
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PKIL+TT + S++ F S+ +S+I N ++ RG +++ K +TS+I+++ N
Sbjct: 69 PKILVTTSKKPSSKLLEF-SKHMSLIFNGLFFMRGRCTKEELSNIMHKNSYTSLILIYEN 127
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
+ P +L I P G T F + K + G LV + + L G++
Sbjct: 128 KGTPSSLTISNFPFGNTFKFSIHGYNRCKTVN-----LGEHCHLVCDRINSELKDLFGKM 182
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
+ P++ + RRV++ N D I FRH+ V
Sbjct: 183 L----PKNS--KSRRVLSLSNVNDKIGFRHYIIV 210
>gi|28277332|gb|AAH45053.1| Ppan protein, partial [Xenopus laevis]
Length = 655
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 27/198 (13%)
Query: 197 IIGLPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGH--RVGR 247
+ LP GPT FK+++ L KD+ + H H P LVLNNF T+ H +
Sbjct: 104 FVRLPKGPTLSFKVTQYSLVKDVVSSLKKHRMHEEQFTHPPLLVLNNFGTQGMHVKLMAT 163
Query: 248 LIQSLFPQSPEFRG-----RR--VVTFHNQRDFIFFRHH--RCVPLEFISCYMWTILCSY 298
+ Q++FP + RR ++ ++++ + FRH+ + VP+ +S M +L
Sbjct: 164 MFQNMFPSINVHKVTLNTIRRCILINYNDETQELEFRHYSLKVVPVG-MSKGMKKLLQEK 222
Query: 299 LTSIMK----AFCYYECRYIFETKESKGSDANGKKAKDA---KSEKTSQQKVITRLQECG 351
++ + + + + E++ + D N + A + +QQ + RL E G
Sbjct: 223 FPNMSRWEDISELLVKGANLSESEAEQDGDHNITELPQACAGRGNMKAQQSAV-RLTEIG 281
Query: 352 PRFTLKLVSLQHGTFDTK 369
PR TL+LV ++ G D K
Sbjct: 282 PRMTLQLVKIEEGLSDGK 299
>gi|294936901|ref|XP_002781903.1| U3 small nucleolar ribonucleoprotein imp4, putative [Perkinsus
marinus ATCC 50983]
gi|239893027|gb|EER13698.1| U3 small nucleolar ribonucleoprotein imp4, putative [Perkinsus
marinus ATCC 50983]
Length = 91
Score = 51.2 bits (121), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
LQE GPRFTLKL SLQ G F + GE+E+V +P+ SR+ F L
Sbjct: 48 LQEIGPRFTLKLRSLQLGLFAKRTGEYEYVWRPDSQVSRKVFAL 91
>gi|325197132|ref|NP_001191417.1| suppressor of SWI4 1 homolog [Xenopus (Silurana) tropicalis]
gi|39794499|gb|AAH64262.1| slc34a2-prov protein [Xenopus (Silurana) tropicalis]
Length = 542
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 27/198 (13%)
Query: 197 IIGLPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGH--RVGR 247
+ LP GPT FK+++ L KD+ + H H P LVLNNF + H +
Sbjct: 98 FVRLPKGPTLSFKVNQYSLMKDVVSSLKKHRMHEEQFTHPPLLVLNNFGNQGMHVKLMAT 157
Query: 248 LIQSLFPQSPEFRG-----RR--VVTFHNQRDFIFFRHH--RCVPLEFISCYMWTILCSY 298
+ Q++FP + RR ++ + ++ + FRH+ + VP+ +S M +L
Sbjct: 158 MFQNMFPSINVHKVNLNTIRRCILINYDDETQQLDFRHYSLKVVPVG-MSKGMKKLLQEK 216
Query: 299 LTSIMK----AFCYYECRYIFETKESKGSDANGKKAKDA---KSEKTSQQKVITRLQECG 351
++ + + + + E++ + D N + A + +QQ + RL E G
Sbjct: 217 FPNMSRWEDISELLVKGANLSESEAEQDGDHNITELPQACAGRGNMKAQQSAV-RLTEIG 275
Query: 352 PRFTLKLVSLQHGTFDTK 369
PR TL+LV ++ G D K
Sbjct: 276 PRMTLQLVKIEEGLSDGK 293
>gi|51513353|gb|AAH80470.1| Unknown (protein for MGC:89755) [Xenopus (Silurana) tropicalis]
Length = 549
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 27/198 (13%)
Query: 197 IIGLPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGH--RVGR 247
+ LP GPT FK+++ L KD+ + H H P LVLNNF + H +
Sbjct: 98 FVRLPKGPTLSFKVNQYSLMKDVVSSLKKHRMHEEQFMHPPLLVLNNFGNQGMHVKLMAT 157
Query: 248 LIQSLFPQSPEFRG-----RR--VVTFHNQRDFIFFRHH--RCVPLEFISCYMWTILCSY 298
+ Q++FP + RR ++ + ++ + FRH+ + VP+ +S M +L
Sbjct: 158 MFQNMFPSINVHKVNLNTIRRCILINYDDETQQLDFRHYSLKVVPVG-MSKGMKKLLQEK 216
Query: 299 LTSIMK----AFCYYECRYIFETKESKGSDANGKKAKDA---KSEKTSQQKVITRLQECG 351
++ + + + + E++ + D N + A + +QQ + RL E G
Sbjct: 217 FPNMSRWEDISELLVKGANLSESEAEQDGDHNITELPQACAGRGNMKAQQSAV-RLTEIG 275
Query: 352 PRFTLKLVSLQHGTFDTK 369
PR TL+LV ++ G D K
Sbjct: 276 PRMTLQLVKIEEGLSDGK 293
>gi|432094672|gb|ELK26152.1| Ribosome production factor 1 [Myotis davidii]
Length = 173
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 19/157 (12%)
Query: 60 VEKRKKLKARDAAEKRAL----ELGEEPPARMTPRTIENTREPDETVCRPDDDELFAGND 115
++ ++ K R AAE++ L + P + P T++N R DET D
Sbjct: 28 IDDGQQEKGRLAAERKLKGEREALSDTAPPKSIPMTMDNQRAYDETTV-----------D 76
Query: 116 ADEFSSILKQGCAPKILITTCRFNSNRGPAFISELL----SVIPNSHYYKRGTYDLKKII 171
+L + +L +T + S+L+ + + +SH Y R LK +I
Sbjct: 77 LAMRRWLLMKLQMDLLLPSTDKLLPRSSLQHQSDLMGEPYNPVNSSHVYYRRGLALKMMI 136
Query: 172 EYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 208
+DFT +IV+H + + P L++ LP+G TAHF
Sbjct: 137 PPCSSRDFTDLIVIHEDCKAPHGLILSHLPNGSTAHF 173
>gi|225708746|gb|ACO10219.1| Suppressor of SWI4 1 homolog [Caligus rogercresseyi]
Length = 481
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 111/264 (42%), Gaps = 61/264 (23%)
Query: 159 YYKRGTYDLKKIIE-YAKK----------KDFTSI--------IVVHTNRREPDALLIIG 199
Y + T D +K++E Y KDF + +V+ T + L I
Sbjct: 45 YIQDLTMDFRKVMEPYTASDIKARSKNVVKDFAHVAGILKVSHLVMFTKTEKSPYLKIGR 104
Query: 200 LPDGPTAHFKLSKLVLRKDIKN-------HGNPTGHIPELVLNNFATR----------LG 242
P GPT F++++ L +D+++ H + L+LNNF++ LG
Sbjct: 105 FPRGPTMTFRINEYTLARDVRSSLKRQVTHDKQFTNHALLILNNFSSSNTSAPPGENPLG 164
Query: 243 HR----VGRLIQSLFP-------QSPEFRGRRVVTFHNQRDFIFFRHH--RCVPLEFISC 289
R + + Q++FP + R ++ + + R + FRH+ + VP +S
Sbjct: 165 PRQMELMSSIFQNMFPSINITTLKLNTIRRCVLLNYDSSRGLVDFRHYTIKIVPAG-LSK 223
Query: 290 YMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTS------QQKV 343
+ I+ + I CY + + FE G A+ KA++ +S + + QK
Sbjct: 224 QVKKIVNAPTHKIPNLSCYEDVQDYFE-----GGAASESKAEEDESAQVNVALKRLNQKS 278
Query: 344 ITRLQECGPRFTLKLVSLQHGTFD 367
+L E GPR +L+ + +Q G +
Sbjct: 279 SIKLVELGPRLSLEPIKIQEGLLN 302
>gi|303391627|ref|XP_003074043.1| U3 small nucleolar ribonucleoprotein [Encephalitozoon intestinalis
ATCC 50506]
gi|303303192|gb|ADM12683.1| U3 small nucleolar ribonucleoprotein [Encephalitozoon intestinalis
ATCC 50506]
Length = 182
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 228 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHR 280
H P+L++NNF T +G +V + +FP P R+VV F Q DFI+FR +R
Sbjct: 85 HPPQLIVNNFTTDIGMQVVEFLAGMFPFHPS--SRQVVNFTVQGDFIYFRLYR 135
>gi|242002872|ref|XP_002436079.1| protein Peter pan, putative [Ixodes scapularis]
gi|215499415|gb|EEC08909.1| protein Peter pan, putative [Ixodes scapularis]
Length = 480
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 39/230 (16%)
Query: 177 KDFTSI--------IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN------- 221
KD+ S+ +VV T + L I LP GPT F++ VL KD+ +
Sbjct: 72 KDYVSVAGLLHVTHMVVFTKTEQAIYLRIARLPRGPTLTFRVEDYVLAKDVLSSLKKKIT 131
Query: 222 HGNPTGHIPELVLNNFATRLGH--RVGRLIQSLFP-------QSPEFRGRRVVTFHNQRD 272
+G+ P LVLNNF+ H + + Q++FP + R ++ F+ +
Sbjct: 132 YGHQYSSHPLLVLNNFSGEGMHLKLMTSMFQNMFPSINVNTVKLNTIRRCLLLNFNQEDS 191
Query: 273 FIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFC-YYECRYIFETKESKGSDANGKKAK 331
I FRH+ ++ C + + + S + ++ E + S+A +
Sbjct: 192 TIDFRHY---TIKVAPCGINRAVKKLVQSRVPDLSRLHDVSEFLEQPGASESEAELEGTS 248
Query: 332 D--------AKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEF 373
+ A Q+ R+ E GPR TLKLV ++ G GGE
Sbjct: 249 NQVLLPQRIASRGNALNQQSSVRVVELGPRLTLKLVKVEEGLM---GGEV 295
>gi|392573448|gb|EIW66588.1| hypothetical protein TREMEDRAFT_74754 [Tremella mesenterica DSM
1558]
Length = 464
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 131/331 (39%), Gaps = 93/331 (28%)
Query: 142 RGPAFISELLSVIPNSHYYKRG---------TYDLKKIIE-----------YAKKKDFTS 181
+GPA ++E +P+S K G D++KI+E A+ +D+ +
Sbjct: 13 KGPA-VAESEQNVPSSFVIKSGKVTRSISQLVRDVRKIMEPNTATRLRERVNARLRDYLA 71
Query: 182 I--------IVVHTNRREPDALLIIG-LPDGPTAHFKLSKLVLRKD-----IKNHGNPTG 227
+ ++V T + L I LP GPT F++S+ L KD ++N G P G
Sbjct: 72 VAPSLGVTHLLVFTLTEAANVHLRIARLPQGPTLTFRISRYSLMKDLVNSALRNVGKPPG 131
Query: 228 ----HIPELVLNNF-------ATRLGHRVGRLIQSLFPQS-------PEFRGRRVVTFHN 269
+ P LVLNNF A + L Q LFP P FR ++++
Sbjct: 132 TEYMNPPLLVLNNFQQPAEGPALPQLKLMSTLFQGLFPAIQVEKSALPTFRRVLLISYSP 191
Query: 270 QRDFIFFRHHR-CVPLEFISCYMWTILCSYLTSIMKA-----------FCYYECRYIFET 317
I RH+ V +S + +L S TS+ + Y R T
Sbjct: 192 VSHLISLRHYTITVRPHGVSRRVRKLLNS--TSVHTSAKRPQLANTDDLADYLLRGRGGT 249
Query: 318 KESKG-----------------SDANGKKAKD---AKSEKTSQQKVITRLQECGPRFTLK 357
S G SD+N + + + K ++K + RL E GPR ++
Sbjct: 250 PGSDGQTAGYDSMSETDNSEAESDSNAVELPEDYVGRGNKKGERKAV-RLVETGPRIEMR 308
Query: 358 LVSLQHGTFDTKGGE-----FEWVHKPEMDT 383
L+ + G ++ GE E+VHK + ++
Sbjct: 309 LIKVVEGLVGSRKGEGETVFHEFVHKSKTES 339
>gi|429961358|gb|ELA40903.1| hypothetical protein VICG_02043 [Vittaforma corneae ATCC 50505]
Length = 187
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 16/155 (10%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
P I I T + + N +SEL + PNS + G I ++D ++ T
Sbjct: 4 PTIFIETPKDSHNSTRELLSELFMIFPNSKKWADGLEVKDSDIFIKIQEDIGPQFLIFTC 63
Query: 189 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 248
+ II + + L + IK + +LVL++F T LG RV +
Sbjct: 64 KTSQFVFKII-------EYRSRASLGIDSTIKKENH------QLVLSHFTTELGLRVANI 110
Query: 249 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHR-CV 282
S FP + E +VV F +DFIFFR +R C+
Sbjct: 111 FMSAFPVNLE--SNQVVNFAVHKDFIFFRMYRFCI 143
>gi|387594732|gb|EIJ89756.1| hypothetical protein NEQG_00526 [Nematocida parisii ERTm3]
gi|387596420|gb|EIJ94041.1| hypothetical protein NEPG_00706 [Nematocida parisii ERTm1]
Length = 206
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 226 TGHIPELVLNNFA-TRLGHRVGRLIQSLFP-QSPEFRGRRVVTFHNQRDFIFFRHHRCV 282
+GH+PEL +NNF T R + I+S++ + P+F GR++V+F +R FI R HR +
Sbjct: 101 SGHMPELSINNFEDTENDMRFIKDIESVYSTEEPDFEGRQLVSFTKKRGFILCRKHRYI 159
>gi|291231531|ref|XP_002735721.1| PREDICTED: peter pan-like [Saccoglossus kowalevskii]
Length = 515
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 62/134 (46%), Gaps = 26/134 (19%)
Query: 177 KDFTSI--------IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI----KNHGN 224
KDF S+ I+V T L + LP GPT FK++ L KDI K+H
Sbjct: 71 KDFLSVSGLLGVSHIIVFTKTEAGINLKVSRLPRGPTLTFKVNSYCLNKDIVSSLKHHSM 130
Query: 225 PTGHI---PELVLNNFATRLGH--RVGRLIQSLFPQSPEFRG-----RRVV--TFHNQRD 272
+G P LVLNNFA H + + Q++FP R RR V F+ + +
Sbjct: 131 YSGQFKQHPLLVLNNFAREGLHVKLMATMFQNMFPSINVNRVKLNSIRRCVLLNFNPETN 190
Query: 273 FIFFRHH--RCVPL 284
I FRH+ + VP+
Sbjct: 191 LIDFRHYSIKVVPI 204
>gi|260797377|ref|XP_002593679.1| hypothetical protein BRAFLDRAFT_165413 [Branchiostoma floridae]
gi|229278907|gb|EEN49690.1| hypothetical protein BRAFLDRAFT_165413 [Branchiostoma floridae]
Length = 373
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 82/193 (42%), Gaps = 33/193 (17%)
Query: 200 LPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGH--RVGRLIQ 250
LP GPT FK+ L KD+ + + + H P LVLNN A H + + Q
Sbjct: 89 LPRGPTLSFKVDSYALCKDVLSTLKRQQTYASQFQHSPLLVLNNLAREGMHFKLMSTMFQ 148
Query: 251 SLFPQSPEFRG-----RRVVTFHNQRD--FIFFRHH--RCVPLEFISCYMWTILCSYLTS 301
++FP R +R V F D + FRH+ + VP+ +S + +L S + +
Sbjct: 149 NMFPSINIHRLKLNTIKRCVLFTYDPDTNMVDFRHYNIKVVPIG-MSRGVKKLLQSKVPN 207
Query: 302 IMKAFCYYE--CRYIF---ETKESKGSDANGKKAKD-----AKSEKTSQQKVITRLQECG 351
+ K YE YI ES+ + D A + QK RL E G
Sbjct: 208 LKK----YEDVSEYILGGGNLSESEAEPDGDQNEVDLPQQVAGRGNEASQKSAIRLTEIG 263
Query: 352 PRFTLKLVSLQHG 364
PR L+LV ++ G
Sbjct: 264 PRLRLQLVKIEEG 276
>gi|392512946|emb|CAD26104.2| hypothetical protein [Encephalitozoon cuniculi GB-M1]
Length = 182
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 228 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHR 280
H+P+L++NNF T G ++ + +FP S R+V F Q DFI+FR +R
Sbjct: 85 HLPQLIVNNFTTDTGMKIVEFLAEMFPFSQS--SRQVANFTVQGDFIYFRVYR 135
>gi|348687226|gb|EGZ27040.1| hypothetical protein PHYSODRAFT_358211 [Phytophthora sojae]
Length = 456
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 33/210 (15%)
Query: 184 VVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD----IKNHGNPTGHI---PELVLNN 236
+ TN L I +P GPT FK++K L K +K + + + P +VLNN
Sbjct: 84 IFFTNTEAGTNLKIARIPRGPTLSFKVTKYSLMKQMHLVVKRPVDASAALKSKPLVVLNN 143
Query: 237 FATRLGH--RVGRLIQSLFP----QSPEFRG-RRVVTFHNQR--DFIFFRHH--RCVPLE 285
F H + Q++FP Q+ RRVV F+ ++ D + FR + R PL
Sbjct: 144 FTAPDDHIKLMNVTFQNMFPAIDVQTVALSECRRVVLFNYEKETDTVEFRQYVIRAAPL- 202
Query: 286 FISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKT------- 338
+S + TI+ + + ++ K E Y+ GS A+ + D S T
Sbjct: 203 GLSKSVKTIVKAKVPNLNKLEDISE--YVLGNGAGIGS-ASDSEVDDEASHVTLPDSFRG 259
Query: 339 ----SQQKVITRLQECGPRFTLKLVSLQHG 364
+K RL E GPR TL L ++ G
Sbjct: 260 RGNRKAEKSAVRLTEIGPRLTLSLTKVERG 289
>gi|19074994|ref|NP_586500.1| hypothetical protein ECU11_1940 [Encephalitozoon cuniculi GB-M1]
gi|449328689|gb|AGE94966.1| hypothetical protein ECU11_1940 [Encephalitozoon cuniculi]
Length = 197
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 228 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHR 280
H+P+L++NNF T G ++ + +FP S R+V F Q DFI+FR +R
Sbjct: 100 HLPQLIVNNFTTDTGMKIVEFLAEMFPFSQS--SRQVANFTVQGDFIYFRVYR 150
>gi|91076816|ref|XP_974431.1| PREDICTED: similar to peter pan CG5786-PA [Tribolium castaneum]
gi|270001841|gb|EEZ98288.1| hypothetical protein TcasGA2_TC000737 [Tribolium castaneum]
Length = 447
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 36/202 (17%)
Query: 195 LLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG-------HIPELVLNNFATRLGH--RV 245
L I LP GPT FK+ L +D+ + H P +VLN+F + H +
Sbjct: 95 LKICRLPRGPTMTFKIHNFSLARDVVSSLKKQAVVEAAFKHSPLIVLNSFTSEGMHLKLM 154
Query: 246 GRLIQSLFP----QSPEFRGRR---VVTFHNQRDFIFFRHH--RCVPLEFISCYMWTILC 296
+ Q++FP + + R ++ ++ I FRH+ + +P+ IS + ++
Sbjct: 155 ASMFQNMFPTINLTNVDLNNVRRCVLLNYNPTTKLIDFRHYTIKVIPVG-ISKGVKKVVQ 213
Query: 297 SYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITR---------- 346
+ ++ K C I E G + + D + T QK+I+R
Sbjct: 214 GKVPNLAK------CGDISEFLTKSGMLSESEFEDDPSNHVTLSQKLISRGNIESGKSSI 267
Query: 347 -LQECGPRFTLKLVSLQHGTFD 367
L E GPR TL+L+ ++ G D
Sbjct: 268 KLTELGPRLTLQLIKIEDGLLD 289
>gi|401828290|ref|XP_003888437.1| brix domain-containing protein [Encephalitozoon hellem ATCC 50504]
gi|392999709|gb|AFM99456.1| brix domain-containing protein [Encephalitozoon hellem ATCC 50504]
Length = 182
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 17/136 (12%)
Query: 145 AFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGP 204
+ E L +IP+SH G+ D + I +D +V N + L II
Sbjct: 17 VLLKEFLDIIPDSH---AGSTDEEPEISIKIVEDVGPQWIVFKNSQLQIVLKIIQYKS-- 71
Query: 205 TAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 264
++SK + KD H P+L++NNF T +G ++ + S+FP S R+V
Sbjct: 72 RDFLRVSKPI-SKD---------HPPQLIVNNFTTDIGMKIVEFLASMFPFSQ--GSRQV 119
Query: 265 VTFHNQRDFIFFRHHR 280
F Q DFI+FR ++
Sbjct: 120 ANFTVQGDFIYFRLYK 135
>gi|238598613|ref|XP_002394655.1| hypothetical protein MPER_05423 [Moniliophthora perniciosa FA553]
gi|215464030|gb|EEB95585.1| hypothetical protein MPER_05423 [Moniliophthora perniciosa FA553]
Length = 180
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 69/159 (43%), Gaps = 43/159 (27%)
Query: 38 PSMIKNKEKRSAVHAKLKHQKKVEK------RKKLKARDAAEKRALELGEEPPARMT--- 88
PS+IKNK KR + K K K+ +K R KL+A D A K+ R+T
Sbjct: 8 PSVIKNKIKREEIANKNKKAKRQDKLQRRLERAKLEASDPATKKK---------RLTTNV 58
Query: 89 PRTIENTREPD----------ETVCRPD-----------DDELFA--GND--ADEFSSIL 123
PRT++NTRE D T RP+ DE A ND A F+S
Sbjct: 59 PRTLDNTREFDPSFLTADPSSSTSARPEASSSGENDPQAQDETAADLANDPFAYYFASEE 118
Query: 124 KQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKR 162
PK+LITT S F EL+ V P + + +R
Sbjct: 119 DPNIPPKVLITTSPKASKSTYDFCDELVGVFPGAEFIRR 157
>gi|301123657|ref|XP_002909555.1| SWI4 1, Peter Pan-like protein suppressor [Phytophthora infestans
T30-4]
gi|262100317|gb|EEY58369.1| SWI4 1, Peter Pan-like protein suppressor [Phytophthora infestans
T30-4]
Length = 453
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 35/211 (16%)
Query: 184 VVHTNRREPDALLIIGLPDGPTAHFKLSK--------LVLRKDIKNHGNPTGHIPELVLN 235
+ TN L I +P GPT FK++K LV+++ + + P +VLN
Sbjct: 84 IFFTNTEAGTNLKIARIPRGPTLSFKVTKYSLMSQMHLVVKRPV-DASQALKSKPLVVLN 142
Query: 236 NFATRLGH--RVGRLIQSLFP----QSPEFRG-RRVVTFHNQR--DFIFFRHH--RCVPL 284
NF T H + Q++FP Q+ RRVV F+ ++ D + FR + R PL
Sbjct: 143 NFTTPDDHIKLMNVTFQNMFPAIDVQTVALSECRRVVLFNYEKETDTVEFRQYVIRAAPL 202
Query: 285 EFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKT------ 338
+S + TI+ + + ++ K E Y+ GS A+ + D + T
Sbjct: 203 -GLSKSVKTIVKAKVPNLNKLEDISE--YVLGNGAGIGS-ASDSEVDDEAAHVTLPDSFR 258
Query: 339 -----SQQKVITRLQECGPRFTLKLVSLQHG 364
+K RL E GPR TL L ++ G
Sbjct: 259 GRGNRKAEKSAVRLTEIGPRLTLSLTKVERG 289
>gi|402470729|gb|EJW04830.1| hypothetical protein EDEG_00967 [Edhazardia aedis USNM 41457]
Length = 283
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 132 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 191
LITT R S++ F + ++ N+ RG+ +K + Y ++ F +II++ NR
Sbjct: 75 LITTVRDPSDKLKHFARRIAHIL-NTTTVTRGSLTIKDLESYMERSQFNAIIIIAENRGT 133
Query: 192 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 224
P L + P GP +F L +V+ D K GN
Sbjct: 134 PSKLSLCMYPYGPLMNFSLFNIVM-SDFKIKGN 165
>gi|170290980|ref|YP_001737796.1| Brix domain-containing protein [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170175060|gb|ACB08113.1| Brix domain protein [Candidatus Korarchaeum cryptofilum OPF8]
Length = 178
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 131 ILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR 190
ILITT R S R +F+ +L V+PNS RG L+ + E A K +IVV T R
Sbjct: 2 ILITTTRRPSKRTRSFVRDLYHVLPNSTRRNRGKMSLEDLNELAIKIGADRVIVVGTQRG 61
Query: 191 EPDALLIIGLPDG---PTAHFKLSKLVLRKDIKNHGNP 225
P +L P + LS + LR++I P
Sbjct: 62 NPSSLTFYEPTPSHLKPISIVSLSGVSLRREITKKRAP 99
>gi|326428015|gb|EGD73585.1| hypothetical protein PTSG_05295 [Salpingoeca sp. ATCC 50818]
Length = 532
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 94/227 (41%), Gaps = 42/227 (18%)
Query: 195 LLIIGLPDGPTAHFKLSKLVLRKDI-----KNHGNPT--GHIPELVLNNF-----ATRLG 242
L + +P GPT F++ + L KD+ K+ G P P LVLNNF RL
Sbjct: 93 LRMARVPRGPTLTFRVMRYSLIKDVVTSQPKSKGVPVFFDKPPLLVLNNFNKPRKEIRL- 151
Query: 243 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRCVPLEFISCYMWTILCSYLTSI 302
+ +L+Q++FP + +V +R +F+ + +E + Y ++ L+
Sbjct: 152 --MAKLLQNMFPA---IKVEKVALSALRRVALFYFNEETEEIE-LRHYEISVKPVGLSRG 205
Query: 303 MKA--------FCYYE--CRYIFETKESKGSDANGKKAKD---------AKSEKTSQQKV 343
+KA Y+ ++ E + SDA K SQ+
Sbjct: 206 IKAVLRTKALDLSQYDDISSFVLEHADGYESDAEAAMGTSKVVLPQTVKGAGNKASQKSA 265
Query: 344 ITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP---EMDTSRRR 387
I +L E GPR LKL+ ++ G + K VHK E + RRR
Sbjct: 266 I-KLVEIGPRLNLKLIKIEEGLCEGKVLHHSIVHKTPAEEKEIERRR 311
>gi|255544047|ref|XP_002513086.1| U3 small nucleolar ribonucleoprotein protein imp4, putative
[Ricinus communis]
gi|223548097|gb|EEF49589.1| U3 small nucleolar ribonucleoprotein protein imp4, putative
[Ricinus communis]
Length = 180
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 13/100 (13%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK L+TT R S F+ + + I G + + IE + D+T + +VH +
Sbjct: 74 PKTLLTTSRNPSAPIIQFVKDCVRTI------NSGCQVISEFIESCRAHDYTDVFLVHEH 127
Query: 189 RREPDALLIIGLPDGPTAHFK-------LSKLVLRKDIKN 221
PD L+I LP GPTA+F + V R DIK+
Sbjct: 128 HGVPDGLIISHLPFGPTAYFGLLNLLLIVVITVTRHDIKD 167
>gi|355696112|gb|AES00232.1| IMP4, U3 small nucleolar ribonucleoprotein,-like protein [Mustela
putorius furo]
Length = 145
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 129 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 188
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 82 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 141
Query: 189 RREP 192
R P
Sbjct: 142 RGTP 145
>gi|449666017|ref|XP_002163125.2| PREDICTED: suppressor of SWI4 1 homolog, partial [Hydra
magnipapillata]
Length = 308
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 35/238 (14%)
Query: 167 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI------- 219
LK + A + I+ + P + I+ LP GPT F++++ L KDI
Sbjct: 65 LKDFVHIAGPYGISHFIIFSKTEKSP-YMKIVRLPRGPTLTFRINEYSLMKDITSILRRP 123
Query: 220 KNHGNPTGHIPELVLNNFATRLGHR--VGRLIQSLFP-------QSPEFRGRRVVTFHNQ 270
K G P +V+NNFAT + + Q++FP + E R + F +
Sbjct: 124 KTIGQQFKFPPLVVMNNFATEAVEMKLMTTVFQNMFPSIKVQKVKLAEIRRCAMFNFDQE 183
Query: 271 RDFIFFRHH--RCVPLEFISCYMWTIL-----CSYLTSIMKAFCYYECRYIFETKESKGS 323
I FRH+ +P+ M + S L I Y+ E++ + +
Sbjct: 184 SGCIDFRHYNIEAIPVGISKGVMKLMKNKIPNLSSLNDISDLVT--GAAYLSESEGEEPT 241
Query: 324 DAN---GKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK 378
D++ ++ + K+ Q V +L E GPR L+L+ ++ G GGE + HK
Sbjct: 242 DSHVTLPQRLPGRGNTKSGQSAV--KLTELGPRLKLELLKIEEG---VSGGEVLY-HK 293
>gi|443708233|gb|ELU03440.1| hypothetical protein CAPTEDRAFT_211498 [Capitella teleta]
Length = 460
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 57/264 (21%)
Query: 155 PNSHYYKRGTY---------DLKKIIE---------YAKK--KDFTSI--------IVVH 186
P+S + RGT D+++++E AK KDF ++ ++
Sbjct: 25 PHSFIFHRGTIGKTMMHLVTDMRRVMEPYTASTLKIKAKNVLKDFINVAGPLNVSHFMIF 84
Query: 187 TNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN-------HGNPTGHIPELVLNNFAT 239
+ ++ L I LP GPT FK+ + L +D+ + H P LV++NF+
Sbjct: 85 SKTKDAAYLRFIRLPRGPTLLFKIEEYSLTRDVLSVMKRRSVESKQFSHHPLLVMSNFSG 144
Query: 240 RLGH--RVGRLIQSLFP----QSPEF-RGRRVVTFH--NQRDFIFFRHH--RCVPLEFIS 288
H + + Q++FP S + + RR V H + D I FRH+ R VPL +S
Sbjct: 145 EGLHLKLMASMFQNMFPSLNVNSVKLGQLRRCVLMHYDKENDLIEFRHYNVRAVPL-GVS 203
Query: 289 CYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDA--NGKKAK-DAKSEKTSQ----- 340
+ I+ + + + K + E ++ ++ + S+A +G + + + E+T +
Sbjct: 204 RGIKKIIKNKIPDMSKYKDFSE--FLLKSGDLSESEAELDGPQNEVEITQERTGRGNLKG 261
Query: 341 QKVITRLQECGPRFTLKLVSLQHG 364
K RL E GPR L+LV ++ G
Sbjct: 262 SKSAIRLSEIGPRMKLRLVKIEDG 285
>gi|449518925|ref|XP_004166486.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Cucumis sativus]
Length = 168
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L+E GPRF L+L ++ GT D + EWV +P M T+++R FL
Sbjct: 123 LKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFL 166
>gi|356521211|ref|XP_003529250.1| PREDICTED: uncharacterized protein LOC100787283 [Glycine max]
Length = 119
Score = 45.4 bits (106), Expect = 0.052, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 90 RTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCA 128
RTIENTRE DETVC+PDDDE G +A F++ G A
Sbjct: 6 RTIENTREHDETVCKPDDDEE-PGYNASGFAAASTPGEA 43
>gi|161899295|ref|XP_001712874.1| U3 snoRNP protein IMP4 [Bigelowiella natans]
gi|75756368|gb|ABA27262.1| U3 snoRNP protein IMP4 [Bigelowiella natans]
Length = 219
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 75/170 (44%), Gaps = 8/170 (4%)
Query: 131 ILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR 190
I ITT R+ + + A ++I + + RG+ L KI++Y K + S+IV+H +
Sbjct: 2 IAITTSRYPTQKTKALCKYFKNIINFAELFTRGSTKLSKIVKYCKDHKYKSLIVLHEYKG 61
Query: 191 EPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQ 250
P+ +LI +F++ K+ K I+ ++V NF + R+ L+
Sbjct: 62 NPNGMLIKYFELNIEIYFRMIKMEFIKLIQISKQLKN--VKVVFINFFSENMRRIKILLN 119
Query: 251 SLFPQSPEFRGRRVVTFHNQRDFIFFR------HHRCVPLEFISCYMWTI 294
+F + ++ + + I FR +H+ +F+ ++ I
Sbjct: 120 EIFDKGTSDNYDGLILMKSYSNIILFRRYFKYYYHKQNSFKFVEVTLFLI 169
>gi|332020811|gb|EGI61209.1| Suppressor of SWI4 1-like protein [Acromyrmex echinatior]
Length = 419
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 177 KDFTSI--------IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN------- 221
KDF S+ + + T L + LP GPT FK+ L +D+ +
Sbjct: 70 KDFVSVASVLHVSHMCIFTKTELGMYLKLCKLPKGPTLTFKIHSFSLTRDVISMLKKQLV 129
Query: 222 HGNPTGHIPELVLNNFATRLGHR---VGRLIQSLFP-------QSPEFRGRRVVTFHNQR 271
+ + P LVLNNF+ G + + Q++FP R + ++
Sbjct: 130 YEEAFKNSPLLVLNNFSGE-GMQLKLIASTFQNMFPTINLTTINLSTIRRCICLNYNTTS 188
Query: 272 DFIFFRHH--RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKK 329
I FRH+ + VP+ +S + ++ + + ++ K C ++ + S+ + +
Sbjct: 189 KIIDFRHYAIKVVPVG-LSKGIKKLVQAKIPNLSK--CQDISEFLTKPTMSESEAEDDEN 245
Query: 330 AKDAKSEKTSQQ------KVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK 378
+ S+K S + K RL E GPR TL+L+ +++G D + E++HK
Sbjct: 246 SHVTLSQKLSSRGNQANSKSAIRLFELGPRITLQLIKVENGLLDGEVLYHEFIHK 300
>gi|325184333|emb|CCA18824.1| SWI4 1 putative [Albugo laibachii Nc14]
Length = 374
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 26/196 (13%)
Query: 186 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI----KNHGNPT---GHIPELVLNNFA 238
HTN R I LP GPT F++ L + + ++ +P+ H P +VLNNF+
Sbjct: 92 HTNLR------IARLPRGPTLSFQIEAFTLMRHMHEFQRHPVDPSLALKHKPLVVLNNFS 145
Query: 239 TRLGH--RVGRLIQSLFP----QSPEFRG-RRVVTFH--NQRDFIFFRHH--RCVPLEFI 287
+ H + + QSLFP Q+ + + RRVV F+ + + I FR + R PL +
Sbjct: 146 SAEDHIQLLNVMFQSLFPPIDLQTIKLQECRRVVLFNYDKEANLIEFRQYVIRANPLG-L 204
Query: 288 SCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQ-KVITR 346
S + +++ + + ++ K + + + S+ + E+ +Q+ K R
Sbjct: 205 SRSVKSLVKAKIPNLAKLNDISDFILGAQGGATSESEVDEATHITMTHERGNQETKSAIR 264
Query: 347 LQECGPRFTLKLVSLQ 362
L E GPR TLKL ++
Sbjct: 265 LAEIGPRLTLKLTKVE 280
>gi|50543678|ref|XP_500005.1| YALI0A12155p [Yarrowia lipolytica]
gi|49645870|emb|CAG83934.1| YALI0A12155p [Yarrowia lipolytica CLIB122]
Length = 406
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 48/216 (22%)
Query: 194 ALLIIGLPDGPTAHFKLSKLVLRKDIK--------NHGNPTGHIPELVLNNFATRLGHR- 244
+L + +P GPT HFK+S+ L KD++ N G P LV+NNF+ +
Sbjct: 102 SLRMARVPRGPTLHFKVSQYSLIKDVRKFVRSPKSNDGKLYKQPPLLVMNNFSLKSDDAT 161
Query: 245 ------VGRLIQSLFP-------QSPEFRGRRVVTFHNQRDF--IFFRHHR--CVPLEFI 287
V ++ Q++FP + P RRVV + ++ I FRH+ P++
Sbjct: 162 NPHETLVTQMFQNMFPPLSAQNTRIPSI--RRVVMLNKDKETGSIEFRHYAIDTRPVDVT 219
Query: 288 SCYMWTI------------------LCSYLTSIMKAFCYYECRYIFETKESKGSDANGKK 329
+ YL A + + E +E D N
Sbjct: 220 RGVKKLTKLKHKLRKKIPNLSKKQDMADYLLDP-DAGAFTSDSDMSEVEEDAIVDLNPDD 278
Query: 330 AKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT 365
+ E+ ++ + +L E GPR TL L+ ++ G
Sbjct: 279 DDEMPLEEGPSKRAV-KLVEIGPRMTLDLIKIEDGV 313
>gi|378756391|gb|EHY66415.1| hypothetical protein NERG_00055 [Nematocida sp. 1 ERTm2]
Length = 206
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 221 NHGNPTGHIPELVLNNFA-TRLGHRVGRLIQSLFP-QSPEFRGRRVVTFHNQRDFIFFRH 278
N +GH+PEL + NF T R + I+ + + P+F GR+VV+F +R FI R
Sbjct: 96 NGAVDSGHMPELSITNFDDTENDLRFIKDIEDAYSTEDPDFEGRQVVSFTKKRGFILCRK 155
Query: 279 HRCV 282
HR +
Sbjct: 156 HRYI 159
>gi|396082555|gb|AFN84164.1| U3 small nucleolar ribonucleoprotein [Encephalitozoon romaleae
SJ-2008]
Length = 182
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 228 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHR 280
H P+L++NNF T +G ++ + ++FP + R+V F Q DFI+FR ++
Sbjct: 85 HPPQLIVNNFTTDIGMKIVDFLANMFPFNQS--SRQVANFTVQGDFIYFRLYK 135
>gi|384496819|gb|EIE87310.1| hypothetical protein RO3G_12021 [Rhizopus delemar RA 99-880]
Length = 267
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 115/240 (47%), Gaps = 30/240 (12%)
Query: 157 SHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLR 216
SH +R + LK + A + T ++ + + L I +P GPT F++ + VL
Sbjct: 27 SHLRERRSNRLKDFVMVAGQLGVTHFVIFSRTEKNIN-LRICRVPRGPTLTFRVVEYVLA 85
Query: 217 KD-IKNHGNP-TGHI-----PELVLNNF--ATRLGHRVGRLIQSLFP----QSPEF-RGR 262
KD + NP T I P +VLNNF + + + ++Q++FP Q+ + + +
Sbjct: 86 KDCLALQKNPKTSDIEYRTSPLIVLNNFQQSGKEFKVMTAMLQNMFPSIDIQTMQLSQAK 145
Query: 263 RVVTFHNQRDF--IFFRHHRC-VPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKE 319
RV+ F+ D I RH+ V +S + ++ + L ++ YE + +E
Sbjct: 146 RVLLFNYNDDTRQIDVRHYTIGVKATGVSKSIKRVVNTDLPNLGD----YEDISDYVLRE 201
Query: 320 SKGSDANGKKAKDAKS----EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 375
+ S+++ + ++ E+ ++Q+ + RL E GPR TL+L +++G GGE +
Sbjct: 202 AIVSESDVEDGPESTVTVTHERRNEQRAV-RLHEIGPRMTLELTKVENGVC---GGEVLY 257
>gi|389583056|dbj|GAB65792.1| hypothetical protein PCYB_072940 [Plasmodium cynomolgi strain B]
Length = 133
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 347 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 390
L E GP FTL+L+SL+ G + K +E+V +P+M +R++ +L
Sbjct: 90 LNEIGPAFTLQLLSLKDGLINDKEKMYEFVLRPDMKVNRKKMYL 133
>gi|322783680|gb|EFZ11018.1| hypothetical protein SINV_13253 [Solenopsis invicta]
Length = 418
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 67/284 (23%)
Query: 155 PNSHYYKRG---------TYDLKKIIE-------YAKKK----DFTSI--------IVVH 186
P+S + RG T D +K++E A+KK DF S+ + +
Sbjct: 22 PHSFVFHRGLPGEHIVELTKDFRKVMEPFTASSLKARKKNAIKDFVSVASVLHVSHMCIF 81
Query: 187 TNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN-------HGNPTGHIPELVLNNFAT 239
T + L + LP GPT FK+ L +D+ + + P LVLNNF+
Sbjct: 82 TKTEQGMYLKLCKLPRGPTLSFKIHSFCLARDVISMVKKQMVYEEAFKTSPLLVLNNFSG 141
Query: 240 RLGHR---VGRLIQSLFP-------QSPEFRGRRVVTFHNQRDFIFFRHH--RCVPLEFI 287
G + + Q++FP R + ++ I FRH+ + VP+ +
Sbjct: 142 E-GMQLKLIASTFQNMFPTINLTTVNLSTIRRCICLNYNATTKTIDFRHYAIKVVPVG-L 199
Query: 288 SCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITR- 346
S + I+ + + ++ K C+ I E +K + + + D S T QK+ +R
Sbjct: 200 SRGVKKIVQAKIPNLSK------CQDISEFL-TKPTMSESEAEDDESSHVTLSQKLSSRG 252
Query: 347 ----------LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPE 380
L E GPR TL+L+ ++ G D + VHK E
Sbjct: 253 NQADSKSAIKLYELGPRITLELIKVESGLLDGEVLFHALVHKTE 296
>gi|340722445|ref|XP_003399616.1| PREDICTED: protein Peter pan-like [Bombus terrestris]
Length = 417
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 25/204 (12%)
Query: 200 LPDGPTAHFKLSKLVLRKDIKN-------HGNPTGHIPELVLNNFATRLGHR---VGRLI 249
LP GPT FK+ L +D+ + + + P ++LNNF+ G + + +
Sbjct: 101 LPRGPTLTFKIHSFSLSRDVISLLKKQMVYEELFKNSPLVILNNFSGE-GMQLKLIASMF 159
Query: 250 QSLFP-------QSPEFRGRRVVTFHNQRDFIFFRHH--RCVPLEFISCYMWTILCSYLT 300
Q++FP R + +++ I RH+ + VP++ +S + ++ + +
Sbjct: 160 QNMFPTINLTTVNLSTIRRCLSLNYNSTSKTIDLRHYAIKVVPVD-VSKGIKKLIQAKIP 218
Query: 301 SIMKA--FCYYECRYIFETKESKGSDANGKKAKDAKSEKT--SQQKVITRLQECGPRFTL 356
++ K F + + E++ +N S + + K RL E GPR TL
Sbjct: 219 NLSKCEDFSDFLTKGTVSESEAEDDPSNHVTLPQTLSSRGNHANNKSAIRLFELGPRLTL 278
Query: 357 KLVSLQHGTFDTKGGEFEWVHKPE 380
+L+ ++ G D + E++HK E
Sbjct: 279 ELIKVEDGLLDGEVLFHEYIHKSE 302
>gi|350416588|ref|XP_003491005.1| PREDICTED: suppressor of SWI4 1 homolog [Bombus impatiens]
Length = 417
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 25/204 (12%)
Query: 200 LPDGPTAHFKLSKLVLRKDIKN-------HGNPTGHIPELVLNNFATRLGHR---VGRLI 249
LP GPT FK+ L +D+ + + + P ++LNNF+ G + + +
Sbjct: 101 LPRGPTLTFKIHSFSLSRDVISLLKKQMIYEELFKNSPLVILNNFSGE-GMQLKLIASMF 159
Query: 250 QSLFP-------QSPEFRGRRVVTFHNQRDFIFFRHH--RCVPLEFISCYMWTILCSYLT 300
Q++FP R + +++ I RH+ + VP++ +S + ++ + +
Sbjct: 160 QNMFPTINLTTVNLSTIRRCLSLNYNSTSKTIDLRHYAIKVVPVD-VSKGIKKLIQAKIP 218
Query: 301 SIMKA--FCYYECRYIFETKESKGSDANGKKAKDAKSEKT--SQQKVITRLQECGPRFTL 356
++ K F + + E++ +N S + + K RL E GPR TL
Sbjct: 219 NLSKCEDFSDFLTKGTVSESEAEDDPSNHVTLPQTLSSRGNHANNKSAIRLFELGPRLTL 278
Query: 357 KLVSLQHGTFDTKGGEFEWVHKPE 380
+L+ ++ G D + E++HK E
Sbjct: 279 ELIKVEDGLLDGEVLFHEYIHKSE 302
>gi|84995112|ref|XP_952278.1| (SSF, Peter Pan) family member protein [Theileria annulata strain
Ankara]
gi|65302439|emb|CAI74546.1| (SSF, Peter Pan) family member protein, putative [Theileria
annulata]
Length = 397
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 42/152 (27%)
Query: 177 KDFTSI--------IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH-GNP-- 225
+DFTS+ ++V + E L I LP GP+ F+++K+ L DI H NP
Sbjct: 64 RDFTSVTDVLGLTHLIVLSQGSEISYLKIANLPSGPSFTFQINKISLISDIFKHCKNPQS 123
Query: 226 ---TGHIPELVLNNFA-----------------------TRLGHRVGRLIQSLFPQSPEF 259
+ + P LVLN F+ TR+ + ++I + + +
Sbjct: 124 FDSSNYSPLLVLNGFSRGTSKGSDDDGSKDDSSRFDKAMTRVTETLNKMISPVDLSTTKI 183
Query: 260 RG-RRVVTFHNQRD-FIFFRHHRCVPLEFISC 289
+ +RV+ FH Q D I RH+ + + C
Sbjct: 184 QNCKRVILFHKQNDGTIVLRHY---SINLVDC 212
>gi|242019748|ref|XP_002430321.1| protein Peter pan, putative [Pediculus humanus corporis]
gi|212515436|gb|EEB17583.1| protein Peter pan, putative [Pediculus humanus corporis]
Length = 444
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 112/276 (40%), Gaps = 64/276 (23%)
Query: 149 ELLSVIPNSHYYKRG---------TYDLKKIIE-----------YAKKKDFTSI------ 182
E L P+S + RG T D +KI+E K KDF +I
Sbjct: 27 EELKNAPHSFVFHRGAVGENISRLTLDFRKIMEPYTASSLKAMKANKMKDFLAISGPLHV 86
Query: 183 --IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI-----KNHGNPTG--HIPELV 233
+ V T+ L I P GPT +FK+ L KD+ K + + H P LV
Sbjct: 87 THMCVFTSTDIGTYLKITRAPRGPTLYFKVLNYSLAKDVISSLKKQYVSDQQFLHPPLLV 146
Query: 234 LNNFATRLGH--RVGRLIQSLFP-----QSPEFRGRRVVTF--HNQRDFIFFRHH--RCV 282
LNNF + + + Q++FP RR V F ++ D I FRH+ +
Sbjct: 147 LNNFTSDEIQLKLMTSMFQNMFPTLNLVNLNLNNVRRCVLFNYNSASDEIDFRHYAIKVT 206
Query: 283 PLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQK 342
P+ IS + ++ + + + K E +I +++ S+A D S T QK
Sbjct: 207 PVN-ISKGVKKMIQNKVPDLSKYSNPAE--FILKSEYLSESEAED----DPDSHVTLPQK 259
Query: 343 VIT-----------RLQECGPRFTLKLVSLQHGTFD 367
+ T RL E GPR TL+L ++ G +
Sbjct: 260 ISTRGNMLLNQSSIRLIEQGPRLTLQLFKIEEGFLN 295
>gi|281342857|gb|EFB18441.1| hypothetical protein PANDA_016573 [Ailuropoda melanoleuca]
Length = 193
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q++ EK K + LG++ P + P+TI+N R
Sbjct: 55 SEIKNKQRRHLMFTRWKQQQRKEKLAIKKKLKKERE---ALGDKAPPKPIPKTIDNQRVY 111
Query: 99 DETVCRPDDDELFAGNDADEFSSILK------QGCAPKILI 133
DETV P+D+E AG A + + + GC K ++
Sbjct: 112 DETVVDPNDEECGAGALARTMTGVGQGTPSTCSGCVGKSVL 152
>gi|145547673|ref|XP_001459518.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427343|emb|CAK92121.1| unnamed protein product [Paramecium tetraurelia]
Length = 357
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 90/217 (41%), Gaps = 45/217 (20%)
Query: 182 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI------PELVLN 235
II+ TN+ + I P GPT F++ K R ++ N P LV+N
Sbjct: 86 IIMTQTNKNS--YIRFIQNPRGPTFTFRILKYANRNEVLNAQRKFKSFSRVFSPPLLVMN 143
Query: 236 NFATRLG------------HRVGRLIQSLFP------QSPEFRGRRVVTFHNQRDFIFFR 277
F T + VG +IQS+FP +P+ + +RV+ F + D I+ R
Sbjct: 144 GFQTDVQTDDPKRPTSDHIKLVGNMIQSMFPAINVQNTNPKTQ-KRVILFSYKNDKIYIR 202
Query: 278 HHRCVPLEFISCYMWTILCSY--------LTSIMKAFCYYECRYIFETKESKGSDANGKK 329
H+ +IS + I L ++ K + + ++ + SD
Sbjct: 203 HY------YISFNLKGIDKKMKKIIKANKLPNLSKYNSFSD--FLQNNHQMFASDTEQSD 254
Query: 330 AKDAKSE--KTSQQKVITRLQECGPRFTLKLVSLQHG 364
++ + E + +Q++ RL E GPR LKL ++ G
Sbjct: 255 LEELEIENKQHKKQQMSIRLHEVGPRLELKLYKIEEG 291
>gi|388579141|gb|EIM19469.1| Brix-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 444
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 97/245 (39%), Gaps = 59/245 (24%)
Query: 163 GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH 222
GT L I+ + + + ++ + T P GPT HF++ + L D++N
Sbjct: 83 GTLGLTHIVIFTRSANHVNMRLART-------------PKGPTLHFRVERYSLMADLRNA 129
Query: 223 GNPTGHI-------PELVLNNFA--TRLGHRVGRLIQSLFP-----QSPEFRGRR--VVT 266
G++ P LVLN F +R +L QSLFP P + RR +++
Sbjct: 130 SKKIGNLANTHKVPPLLVLNGFPQDSRPHKLAAQLFQSLFPPLDVSNLPLSQARRLLLLS 189
Query: 267 FHNQRDFIFFRHH--------------RCVPLEFISCYMWTI-----LCSYLTSIMKAFC 307
++ I RH+ R VP + + + + Y+ + +
Sbjct: 190 YNPTTKTIDMRHYEITVKPHGVSKRVRRVVPGASTANKLPNLSNVQDISQYI--LGQENS 247
Query: 308 YYECRYIFETKESKGSDANGKK------AKD--AKSEKTSQQKVITRLQECGPRFTLKLV 359
YE +++ D G+ A+D + K +++ I +L+E GPR + LV
Sbjct: 248 GYESAVTSDSEVESEVDEAGQPVRVVQLAEDFVGRGNKKDEKRAI-KLKEIGPRLEISLV 306
Query: 360 SLQHG 364
+ G
Sbjct: 307 KVTTG 311
>gi|145480587|ref|XP_001426316.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393390|emb|CAK58918.1| unnamed protein product [Paramecium tetraurelia]
Length = 357
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 45/217 (20%)
Query: 182 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI------PELVLN 235
II+ TN+ + I P GPT F++ K R ++ N P LV+N
Sbjct: 86 IIMTQTNKN--SYIRFIQNPRGPTFTFRILKYANRNEVLNAQRKFKSFSRVFSPPLLVMN 143
Query: 236 NFATRLGHR------------VGRLIQSLFPQ------SPEFRGRRVVTFHNQRDFIFFR 277
F T VG +IQS+FP +P+ + +RV+ F + D I+ R
Sbjct: 144 GFQTDFQSDDPKKPTSDHIKLVGNMIQSMFPAINVQNTNPKTQ-KRVILFSYKNDKIYIR 202
Query: 278 HHRCVPLEFISCYMWTILCSY--------LTSIMKAFCYYECRYIFETKESKGSDANGKK 329
H+ +IS + I L ++ K + + ++ + SD
Sbjct: 203 HY------YISFNLKGIDKKMKKIIKANKLPNLSKYNSFSD--FLQNNHQMFASDTEQSD 254
Query: 330 AKDAKSE--KTSQQKVITRLQECGPRFTLKLVSLQHG 364
++ + E + +Q++ RL E GPR LKL ++ G
Sbjct: 255 LEELEFENKQHKKQQMSIRLHEVGPRLELKLYKIEEG 291
>gi|321454880|gb|EFX66032.1| hypothetical protein DAPPUDRAFT_263794 [Daphnia pulex]
Length = 419
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 99/241 (41%), Gaps = 44/241 (18%)
Query: 177 KDFTSII-------VVHTNRREPDALL-IIGLPDGPTAHFKLSKLVLRKDI-------KN 221
KDF SI +V +R E L I LP GPT FK+ + L KDI
Sbjct: 73 KDFVSIAGPLHVTHLVMFSRSELSPFLRICRLPHGPTLTFKILEYSLSKDIVSIQKRQNT 132
Query: 222 HGNPTGHIPELVLNNFA-TRLGHRV-GRLIQSLFPQSPEFRG-----RRVVTFHN--QRD 272
+ P +VLNNFA L ++ + Q++FP + RR V H +
Sbjct: 133 YDKQYLTHPLVVLNNFAGEELKLKLMTSMFQNMFPSINVAKVKLNTIRRCVLLHYYPEDG 192
Query: 273 FIFFRHH--RCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKA 330
+ FRH+ + VP+ +S + ++ S + ++ K I E E G + +
Sbjct: 193 SVEFRHYSIKAVPVG-VSKAVKKLVSSKVPNLGK------LSDISEFIEKSGQYSESEAE 245
Query: 331 KDAKSEKTSQQ-----------KVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 379
D S T Q K R+ E GPR ++L+ ++ G D + +++ K
Sbjct: 246 DDPASNVTLPQNLAGRGSKAGAKSAVRMIELGPRIRMELIKIEEGIVDGEVLYHQFIQKT 305
Query: 380 E 380
E
Sbjct: 306 E 306
>gi|399949679|gb|AFP65337.1| hypothetical protein CMESO_148 [Chroomonas mesostigmatica CCMP1168]
Length = 240
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 183 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI----KNHGNPTGHIPELVLNNFA 238
+ V + ++ L + +P GP FKL K L+ +I K + N IP L+LNNF+
Sbjct: 61 VWVFSEKKSYCFLCLSKIPKGPLILFKLLKFSLKNEIVISKKKYKN-FKEIPILLLNNFS 119
Query: 239 TRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHR 280
+ L + + +I++ F R+ + F Q++ IFF R
Sbjct: 120 SILENEI--IIETTLKDVFFFERRKKLIFQKQKNVIFFDFLR 159
>gi|383859852|ref|XP_003705406.1| PREDICTED: protein Peter pan-like [Megachile rotundata]
Length = 420
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 39/211 (18%)
Query: 200 LPDGPTAHFKLSKLVLRKDIKN-------HGNPTGHIPELVLNNFATRLGHR---VGRLI 249
LP GPT FK+ L +D+ + + + P +VLNNF+ G + + +
Sbjct: 101 LPRGPTLTFKIHSFSLARDVISTLKKQMVYDELFKNSPLVVLNNFSGE-GMQLKLIASMF 159
Query: 250 QSLFP-------QSPEFRGRRVVTFHNQRDFIFFRHH--RCVPLEFISCYMWTILCSYLT 300
Q++FP R + +++ + I RH+ R VP+ +S + ++ + +
Sbjct: 160 QNMFPTINLTSVNLSTIRRCLCLNYNSTTETIDLRHYAIRVVPVG-LSKGVKKLVQAKVP 218
Query: 301 SIMKAFCYYECRYIFETKESKGSDANGKKAKDAKSEKTSQQKVIT-----------RLQE 349
++ K C F +KG+ + + D S T QK+ + RL E
Sbjct: 219 NLSK------CED-FSDFLTKGTVSESEAEDDPASHVTLPQKLSSRGNHVNSQSAIRLSE 271
Query: 350 CGPRFTLKLVSLQHGTFDTKGGEFEWVHKPE 380
GPR TL+L+ ++ G D + ++V K E
Sbjct: 272 IGPRLTLELIKVEDGLLDGEVLYHKYVQKSE 302
>gi|346470565|gb|AEO35127.1| hypothetical protein [Amblyomma maculatum]
Length = 492
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 92/223 (41%), Gaps = 40/223 (17%)
Query: 177 KDFTSI--------IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD-IKNHGNPTG 227
KDF S+ +VV T ++ + + LP GPT F++ L +D I + P
Sbjct: 72 KDFVSVAGLLHVTHLVVFTKTQKAIYMRLARLPRGPTLTFRVENYALARDIISSLKKPVT 131
Query: 228 HI------PELVLNNFATRLGH--RVGRLIQSLFP-------QSPEFRGRRVVTFHNQRD 272
+ P LVLNNF+ H + + Q++FP + R ++ +++
Sbjct: 132 YTHQFSSHPLLVLNNFSGEGMHFKLMASMFQNMFPSINIHKVKLNTVRRCLLLNYNSSDQ 191
Query: 273 FIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKD 332
I FRH+ ++ C + + + S + + R I E + G + +
Sbjct: 192 SIDFRHY---TIKVAPCGINRAVKKLVQSKVPDLGH--LRDISEYVDQGGLSESEVELDG 246
Query: 333 AKSEKTSQQKVIT-----------RLQECGPRFTLKLVSLQHG 364
A ++ QK+ + R+ E GPR LKLV ++ G
Sbjct: 247 ATNQVVLPQKISSRGNTLNQQSSVRMVELGPRIKLKLVKIEEG 289
>gi|269860191|ref|XP_002649818.1| exosome subunit/U3 small nucleolar ribonucleoprotein (snoRNP)
component, predicted [Enterocytozoon bieneusi H348]
gi|220066759|gb|EED44231.1| exosome subunit/U3 small nucleolar ribonucleoprotein (snoRNP)
component, predicted [Enterocytozoon bieneusi H348]
Length = 195
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 22/138 (15%)
Query: 147 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVV--HTNRREPDALLIIGLPDGP 204
I +++ + PNS I++ +K DF I++ H N P A +II +
Sbjct: 22 IDDIIRIFPNS-----------IIVDSEEKLDFQRCIIIRIHENNGIP-AYIIINTNETQ 69
Query: 205 TAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 262
K++ + KN G T +L+L+NF + LG ++ + ++FP
Sbjct: 70 IVF----KIISYRTRKNLGIKTEFSDSSQLILSNFTSDLGLKIAEIFMNIFPMDTT--SN 123
Query: 263 RVVTFHNQRDFIFFRHHR 280
++V F ++F+FFR ++
Sbjct: 124 QIVNFSVYKEFVFFRMYK 141
>gi|357615304|gb|EHJ69586.1| putative IMP4, U3 small nucleolar ribonucleoprotein,-like protein
[Danaus plexippus]
Length = 97
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 347 LQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 390
L E GPRF +KL ++ GT + + EW +P M+TS +R FL
Sbjct: 44 LSEIGPRFQMKLYEIKLGTLEALDAADTEWALRPYMNTSSKRRFL 88
>gi|167516400|ref|XP_001742541.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779165|gb|EDQ92779.1| predicted protein [Monosiga brevicollis MX1]
Length = 315
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 24/192 (12%)
Query: 200 LPDGPTAHFKLSKLVLRKD---IKNHGNPT----GHIPELVLNNFATRLGHRV--GRLIQ 250
+P GPT F + + L KD I+ H H LVLNNF H +++Q
Sbjct: 96 VPRGPTLTFHVEQFCLMKDVAAIQKHPRAAVKQYTHPALLVLNNFGGDANHLTLCAKVLQ 155
Query: 251 SLFPQ----SPEFRGRRVVTFHN---QRDFIFFRHHRCVPLEF-ISCYMWTILCSYLTSI 302
++FP E + V N + I FRH+ V F +S + +IL + + +
Sbjct: 156 NMFPSISVGEVELTTIKRVALFNYDAESQCIEFRHYELVVQPFGVSKTVKSILKTEVPDL 215
Query: 303 MKAFCYYECRYIFETKESKGSDANG-KKAKDA--KSEKTSQQKVITRLQ--ECGPRFTLK 357
K E ++ + SD G +A D + K+ Q+ +RL+ E GPR L+
Sbjct: 216 GKLEDISE--FLMRGDVAYESDGEGIAEAVDLPEPAHKSHQRGGKSRLKLVELGPRMNLR 273
Query: 358 LVSLQHGTFDTK 369
L+ ++ G D K
Sbjct: 274 LLKIEEGLCDGK 285
>gi|427789383|gb|JAA60143.1| Putative rna-binding protein [Rhipicephalus pulchellus]
Length = 495
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 40/223 (17%)
Query: 177 KDFTSI--------IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD-IKNHGNPTG 227
KDF S+ +VV T + + LP GPT F++ L +D I + P
Sbjct: 72 KDFVSVAGLLHVTHLVVFTKTERAIYMRLARLPRGPTLTFRVENYALARDIISSLKKPVT 131
Query: 228 HI------PELVLNNFATRLGH--RVGRLIQSLFP-------QSPEFRGRRVVTFHNQRD 272
+ P LVLNNF+ H + + Q++FP + R ++ + +
Sbjct: 132 YTHQFSSHPLLVLNNFSGEGMHFKLMASMFQNMFPSINIHTVKLNTIRRCLLLNYDSTDQ 191
Query: 273 FIFFRHHRCVPLEFISCYMWTILCSYLTSIMKAFCYYECRYIFETKESKGSDANGKKAKD 332
I FRH+ ++ C + + + S + + R I E + G + +
Sbjct: 192 TIDFRHY---TIKVAPCGINRAVKKLVQSKVPDLGH--LRDISEYVDQGGLSESEAELDG 246
Query: 333 AKSEKTSQQKVIT-----------RLQECGPRFTLKLVSLQHG 364
A ++ QK+ + R+ E GPR LKLV ++ G
Sbjct: 247 ASNQVVLPQKICSRGNVLNQQSSVRMVELGPRMKLKLVKIEEG 289
>gi|357457821|ref|XP_003599191.1| Chaperone protein clpB [Medicago truncatula]
gi|355488239|gb|AES69442.1| Chaperone protein clpB [Medicago truncatula]
Length = 647
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 80 GEEPPARMTPRTIENTREPDETVCRPDDDELFAGNDADEFSSIL 123
G E P + + IEN +E DET+C+PDD+E+ N F+ +L
Sbjct: 434 GGELPNKKVLKIIENKKEVDETICKPDDEEVELDNVVRYFTLLL 477
>gi|237840289|ref|XP_002369442.1| hypothetical protein TGME49_053870 [Toxoplasma gondii ME49]
gi|211967106|gb|EEB02302.1| hypothetical protein TGME49_053870 [Toxoplasma gondii ME49]
Length = 4787
Score = 38.9 bits (89), Expect = 4.8, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 21/145 (14%)
Query: 8 SEGEELLNEGEKENDKNNENISKKMKKEI------LPSMIKNKEKRSAVHAKLKHQKKVE 61
SEG EL E K++ + N N + ++E+ P + N E + +H
Sbjct: 4349 SEGRELQEETTKKDQQANRNSDAEDEREVSDTLKNSPPVGLNVEGTHTSLGQGRHGASSG 4408
Query: 62 KRKKLKARDAAEKRAL-ELGE-EPPARMTPRTIENTREPDE-TVCRPDDDELFAGNDADE 118
+R K + D + R++ E+ + + PAR E++ EPDE + CR G ++ +
Sbjct: 4409 ERGKHRGVDGTDARSMREMNKCQLPAR------EHSTEPDEGSTCRE------RGTESGD 4456
Query: 119 FSSILKQGCAPKILITTCRFNSNRG 143
+ GC P++ + NSN+G
Sbjct: 4457 LEEDPEPGCCPQMSPCSSPLNSNQG 4481
>gi|149630926|ref|XP_001521797.1| PREDICTED: ribosome production factor 1-like [Ornithorhynchus
anatinus]
Length = 151
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q ++++KL A+ +K LG++ P + P+TI+N R
Sbjct: 54 SEIKNKQRRHFMFLRWKQQ---QRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVY 110
Query: 99 DETVCRPDDDE 109
DET+ PDD+E
Sbjct: 111 DETIVDPDDEE 121
>gi|333907564|ref|YP_004481150.1| carboxyl-terminal protease [Marinomonas posidonica IVIA-Po-181]
gi|333477570|gb|AEF54231.1| carboxyl-terminal protease [Marinomonas posidonica IVIA-Po-181]
Length = 682
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 144 PAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNR-----REPDALLII 198
P F S+ ++ YK T D KK+IE +++D +++I+ N +E +AL +
Sbjct: 363 PTFYSDFAAIQAGEKDYKSSTRDTKKLIEELRQEDISALILDLRNNGGGSLQEANALAGL 422
Query: 199 GLPDGPTAHFK 209
+P GPT +
Sbjct: 423 FIPSGPTVQIR 433
>gi|152996897|ref|YP_001341732.1| carboxyl-terminal protease [Marinomonas sp. MWYL1]
gi|150837821|gb|ABR71797.1| carboxyl-terminal protease [Marinomonas sp. MWYL1]
Length = 698
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 144 PAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNR-----REPDALLII 198
P F S+ ++ YK T D K++IE +K+D +++I+ N +E +AL +
Sbjct: 379 PTFYSDFAAIQAGDKNYKSSTRDTKELIEELRKEDISALILDLRNNGGGSLQEANALAGL 438
Query: 199 GLPDGPTAHFK 209
+P GPT +
Sbjct: 439 FIPSGPTVQIR 449
>gi|301782899|ref|XP_002926865.1| PREDICTED: ribosome production factor 1-like [Ailuropoda
melanoleuca]
Length = 125
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 39 SMIKNKEKRSAVHAKLKHQKKVEKRKKLKARDAAEKRALELGEEPPARMTPRTIENTREP 98
S IKNK++R + + K Q++ EK K + LG++ P + P+TI+N R
Sbjct: 55 SEIKNKQRRHLMFTRWKQQQRKEKLAIKKKLKKERE---ALGDKAPPKPIPKTIDNQRVY 111
Query: 99 DETVCRPDDDELF 111
DETV P+D+E+
Sbjct: 112 DETVVDPNDEEVM 124
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,267,417,330
Number of Sequences: 23463169
Number of extensions: 264570156
Number of successful extensions: 1148358
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 1223
Number of HSP's that attempted gapping in prelim test: 1112737
Number of HSP's gapped (non-prelim): 25530
length of query: 390
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 246
effective length of database: 8,980,499,031
effective search space: 2209202761626
effective search space used: 2209202761626
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)