Query 016422
Match_columns 390
No_of_seqs 161 out of 271
Neff 6.6
Searched_HMMs 13730
Date Mon Mar 25 13:19:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016422.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016422hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1seta1 a.2.7.1 (A:1-110) Sery 37.7 64 0.0047 23.5 7.9 58 308-369 41-98 (110)
2 d1lvfa_ a.47.2.1 (A:) Syntaxin 37.4 39 0.0029 24.9 6.5 30 339-368 39-68 (106)
3 d1st6a5 a.24.9.1 (A:489-646) V 34.2 26 0.0019 28.2 5.2 75 43-121 79-157 (158)
4 d1s35a2 a.7.1.1 (A:1169-1273) 28.4 88 0.0064 21.7 8.2 9 311-319 9-17 (105)
5 d1ez3a_ a.47.2.1 (A:) Syntaxin 24.2 1.3E+02 0.0091 22.1 7.9 29 339-367 49-77 (124)
6 d1u00a1 a.8.4.1 (A:504-615) Ch 20.6 1.2E+02 0.0089 22.0 6.7 39 309-354 54-92 (112)
7 d1i5na_ a.24.10.3 (A:) Chemota 18.7 1.6E+02 0.012 21.3 7.2 56 311-366 56-114 (128)
8 d1fioa_ a.47.2.1 (A:) Sso1 {Ba 18.2 1.7E+02 0.012 22.2 7.6 46 309-354 16-61 (196)
9 d1wa8a1 a.25.3.1 (A:1-99) ESAT 18.1 1.4E+02 0.011 20.6 6.4 56 312-367 22-77 (99)
10 d2p90a1 c.56.8.1 (A:6-274) Hyp 17.1 1.2E+02 0.0088 25.4 6.7 59 312-371 207-267 (269)
No 1
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=37.74 E-value=64 Score=23.48 Aligned_cols=58 Identities=9% Similarity=0.188 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHhcchhhhhhHHhHHH
Q 016422 308 LREIYQIEKSTRLMNELLDSAQFPITEEKEGEVRQRVQELSMVFESIKRGLNPLEGQVREVF 369 (390)
Q Consensus 308 l~El~~vdaav~~L~~~i~~~~~~~~~e~~~~v~~~veeL~~~~e~Le~GLe~Le~qVd~lF 369 (390)
..+++++.+--..+...|.. ...++.+++...+.+|+..+..+++.+..++.+++++.
T Consensus 41 ~~~~e~l~~~rN~~sk~i~k----~~~~~~~~l~~~~k~lk~~i~~le~~~~~~~~~l~~~l 98 (110)
T d1seta1 41 KKRLQEVQTERNQVAKRVPK----APPEEKEALIARGKALGEEAKRLEEALREKEARLEALL 98 (110)
T ss_dssp HHHHHHHHHHHHHHHHHGGG----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH----hhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555554444444422 12344556777788888888888888777777766553
No 2
>d1lvfa_ a.47.2.1 (A:) Syntaxin 6, SNAP-25 homolog {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=37.44 E-value=39 Score=24.90 Aligned_cols=30 Identities=27% Similarity=0.326 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHhcchhhhhhHHhHH
Q 016422 339 EVRQRVQELSMVFESIKRGLNPLEGQVREV 368 (390)
Q Consensus 339 ~v~~~veeL~~~~e~Le~GLe~Le~qVd~l 368 (390)
++...-.+|+..|+.++.-|++|++-|.-+
T Consensus 39 e~~~~~~eL~~~l~siewdL~dLe~av~~v 68 (106)
T d1lvfa_ 39 EIDWTTNELRNNLRSIEWDLEDLDETISIV 68 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 455667777777777777777777777633
No 3
>d1st6a5 a.24.9.1 (A:489-646) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=34.18 E-value=26 Score=28.23 Aligned_cols=75 Identities=8% Similarity=0.156 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHHHhhcccCCCCccCHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCChhhhHHHHH----HHhhHHHHH
Q 016422 43 TELESFQKRVTDRFLDLSSSSDELLTLSWVQKLLQSFLISQDEFRQILFRNKSQLHKPPMDRLIADY----FERSVKALD 118 (390)
Q Consensus 43 ~~l~~F~~~L~~rl~~L~~~~~~~LSl~wl~~al~~ll~~~~e~~~li~~~~~~l~~~~~~~~vdeY----ld~SvKlLD 118 (390)
|.-..--..+.++|++|.. .+.-+=+.+++|.|+.|..-+..+|-....|...|..+.-++|| .+.+-|+.+
T Consensus 79 PeA~~lA~qi~~kL~dL~~----~v~~Avv~~v~d~f~dt~tpl~~l~~Aa~a~~~~p~re~~~~e~a~~f~~~a~~~~~ 154 (158)
T d1st6a5 79 PQARAIAAQLQDSLKDLKA----RMQEAMTQEVSDVFSDTTTPIKLLAVAATAPSDTPNREEVFEERAANFENHAARLGA 154 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHSSCSSHHHHHHHHHHHSCSCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhhhHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 4666666778888888863 46666788888999999888888888777766666666666654 667777777
Q ss_pred HHH
Q 016422 119 VCN 121 (390)
Q Consensus 119 ~Cn 121 (390)
+|+
T Consensus 155 ~ae 157 (158)
T d1st6a5 155 TAE 157 (158)
T ss_dssp HHH
T ss_pred Hhc
Confidence 775
No 4
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.43 E-value=88 Score=21.73 Aligned_cols=9 Identities=22% Similarity=-0.038 Sum_probs=3.3
Q ss_pred HHHHHHHHH
Q 016422 311 IYQIEKSTR 319 (390)
Q Consensus 311 l~~vdaav~ 319 (390)
.+.++..+.
T Consensus 9 ~~~~~~Wi~ 17 (105)
T d1s35a2 9 AKQAEAILS 17 (105)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 5
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=24.24 E-value=1.3e+02 Score=22.07 Aligned_cols=29 Identities=10% Similarity=0.352 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHhcchhhhhhHHhH
Q 016422 339 EVRQRVQELSMVFESIKRGLNPLEGQVRE 367 (390)
Q Consensus 339 ~v~~~veeL~~~~e~Le~GLe~Le~qVd~ 367 (390)
.+...+.++.+....+...|+.|++.++.
T Consensus 49 ~l~~~~~~i~~~a~~ik~~Lk~l~~~~~~ 77 (124)
T d1ez3a_ 49 ELEELMSDIKKTANKVRSKLKSIEQSIEQ 77 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45566667777777777777777666544
No 6
>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]}
Probab=20.62 E-value=1.2e+02 Score=21.99 Aligned_cols=39 Identities=10% Similarity=0.223 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHH
Q 016422 309 REIYQIEKSTRLMNELLDSAQFPITEEKEGEVRQRVQELSMVFESI 354 (390)
Q Consensus 309 ~El~~vdaav~~L~~~i~~~~~~~~~e~~~~v~~~veeL~~~~e~L 354 (390)
.|...|..++..|..++++ ++...++..+++|...+..|
T Consensus 54 ~e~~~i~~~i~~l~~~l~~-------~d~~~I~~~~~~L~~~~~~~ 92 (112)
T d1u00a1 54 AERQVIDDAAAHLSEVAQG-------DDVDAIEQAIKNVDKQTQDF 92 (112)
T ss_dssp HHHHHHHHHHHHHHHHTTS-------SCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHH
Confidence 4555566666666666532 12345556666665555544
No 7
>d1i5na_ a.24.10.3 (A:) Chemotaxis protein CheA P1 domain {Salmonella typhimurium [TaxId: 90371]}
Probab=18.70 E-value=1.6e+02 Score=21.28 Aligned_cols=56 Identities=16% Similarity=0.252 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHhhc---CCCCChhhHHHHHHHHHHHHHHHHHHhcchhhhhhHHh
Q 016422 311 IYQIEKSTRLMNELLDSA---QFPITEEKEGEVRQRVQELSMVFESIKRGLNPLEGQVR 366 (390)
Q Consensus 311 l~~vdaav~~L~~~i~~~---~~~~~~e~~~~v~~~veeL~~~~e~Le~GLe~Le~qVd 366 (390)
++.+...+..++.+++.+ +.+.+++-...+...++.|+..++.+..|-++-...++
T Consensus 56 l~~i~~lah~lE~~l~~lr~~~~~~~~~~~~~l~~~~d~l~~~l~~~~~~~~~~~~~~~ 114 (128)
T d1i5na_ 56 FTILQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKNSEEPDAASFE 114 (128)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccHH
Confidence 333444444455555442 33345555566777788888888887777554333333
No 8
>d1fioa_ a.47.2.1 (A:) Sso1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=18.21 E-value=1.7e+02 Score=22.22 Aligned_cols=46 Identities=11% Similarity=0.262 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHH
Q 016422 309 REIYQIEKSTRLMNELLDSAQFPITEEKEGEVRQRVQELSMVFESI 354 (390)
Q Consensus 309 ~El~~vdaav~~L~~~i~~~~~~~~~e~~~~v~~~veeL~~~~e~L 354 (390)
.++..|...+..|..+........+.+....++..++.+...+..+
T Consensus 16 ~~i~~i~~~i~~L~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 61 (196)
T d1fioa_ 16 RDLDKYDHTINQVDSLHKRLLTEVNEEQASHLRHSLDNFVAQATDL 61 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555554433222222333334444444444333333
No 9
>d1wa8a1 a.25.3.1 (A:1-99) ESAT-6 like protein EsxB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=18.06 E-value=1.4e+02 Score=20.56 Aligned_cols=56 Identities=11% Similarity=0.086 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHhcchhhhhhHHhH
Q 016422 312 YQIEKSTRLMNELLDSAQFPITEEKEGEVRQRVQELSMVFESIKRGLNPLEGQVRE 367 (390)
Q Consensus 312 ~~vdaav~~L~~~i~~~~~~~~~e~~~~v~~~veeL~~~~e~Le~GLe~Le~qVd~ 367 (390)
..++..+..|...++.....-..+-.+......++.......|.+.|+.+...++.
T Consensus 22 ~~l~~~l~~l~~~v~~l~~~W~G~A~~af~~~~~~w~~~~~~l~~~L~~i~~~L~~ 77 (99)
T d1wa8a1 22 GDLKTQIDQVESTAGSLQGQWRGAAGTAAQAAVVRFQEAANKQKQELDEISTNIRQ 77 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 10
>d2p90a1 c.56.8.1 (A:6-274) Hypothetical protein Cgl1923 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=17.08 E-value=1.2e+02 Score=25.40 Aligned_cols=59 Identities=17% Similarity=0.213 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCh--hhHHHHHHHHHHHHHHHHHHhcchhhhhhHHhHHHHH
Q 016422 312 YQIEKSTRLMNELLDSAQFPITE--EKEGEVRQRVQELSMVFESIKRGLNPLEGQVREVFHK 371 (390)
Q Consensus 312 ~~vdaav~~L~~~i~~~~~~~~~--e~~~~v~~~veeL~~~~e~Le~GLe~Le~qVd~lFr~ 371 (390)
+...+.++.|..+++ ...+.++ ++++.++.+++++...-+.+.+-++.||++-|..|.+
T Consensus 207 ~AA~~lL~~l~~~~g-l~id~~~L~e~Ae~~e~~i~~l~e~~~e~~~~v~~LE~~yD~~~~~ 267 (269)
T d2p90a1 207 AATLKLLQSIADSAD-LNLPLLALERDAEKVHRQLMEQTEESSEIQRVVGALEQQYDSELER 267 (269)
T ss_dssp HHHHHHHHHHHHHHT-CCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC-CCCChHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhHhhhhhc
Done!