Query 016427
Match_columns 390
No_of_seqs 280 out of 1123
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 06:45:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016427.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016427hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1378 Purple acid phosphatas 100.0 3.5E-40 7.6E-45 333.6 17.4 184 166-377 42-226 (452)
2 PLN02533 probable purple acid 100.0 4.3E-37 9.3E-42 315.4 20.3 174 164-374 39-213 (427)
3 cd00839 MPP_PAPs purple acid p 99.5 6.1E-14 1.3E-18 135.9 8.3 79 285-374 3-83 (294)
4 COG3540 PhoD Phosphodiesterase 99.3 1.1E-11 2.3E-16 126.7 13.1 131 238-386 98-259 (522)
5 PF09423 PhoD: PhoD-like phosp 99.3 3.2E-11 6.8E-16 125.0 13.7 122 237-375 60-210 (453)
6 cd07378 MPP_ACP5 Homo sapiens 98.9 2.4E-09 5.2E-14 103.1 6.1 79 287-373 1-84 (277)
7 cd07399 MPP_YvnB Bacillus subt 98.7 5.4E-08 1.2E-12 91.3 7.4 77 287-371 1-81 (214)
8 PF00149 Metallophos: Calcineu 98.5 2.2E-07 4.7E-12 78.2 7.3 78 287-373 1-79 (200)
9 cd07395 MPP_CSTP1 Homo sapiens 98.5 2E-07 4.4E-12 89.3 7.3 88 286-373 4-100 (262)
10 cd07383 MPP_Dcr2 Saccharomyces 98.4 1.4E-06 3E-11 80.4 8.4 84 286-370 2-87 (199)
11 cd07396 MPP_Nbla03831 Homo sap 98.3 1.9E-06 4.1E-11 83.3 7.7 83 287-374 1-88 (267)
12 cd07402 MPP_GpdQ Enterobacter 98.2 4.3E-06 9.2E-11 78.5 7.1 79 288-372 1-83 (240)
13 PRK11148 cyclic 3',5'-adenosin 98.1 7.3E-06 1.6E-10 79.5 7.8 90 275-372 5-98 (275)
14 cd07385 MPP_YkuE_C Bacillus su 98.0 1.4E-05 3.1E-10 74.2 7.8 75 287-374 2-78 (223)
15 PTZ00422 glideosome-associated 98.0 1.1E-05 2.4E-10 82.5 7.2 86 275-372 17-109 (394)
16 cd00840 MPP_Mre11_N Mre11 nucl 97.9 2.7E-05 5.7E-10 71.9 7.5 87 288-374 1-91 (223)
17 KOG2679 Purple (tartrate-resis 97.9 1.7E-05 3.7E-10 76.9 5.1 90 275-374 34-128 (336)
18 PRK11340 phosphodiesterase Yae 97.8 7.7E-05 1.7E-09 72.5 9.5 76 286-373 49-126 (271)
19 cd07400 MPP_YydB Bacillus subt 97.8 3.7E-05 7.9E-10 66.7 6.0 46 325-371 34-80 (144)
20 KOG1432 Predicted DNA repair e 97.8 8.9E-05 1.9E-09 74.0 8.7 90 284-374 51-149 (379)
21 cd00842 MPP_ASMase acid sphing 97.7 4.1E-05 8.9E-10 74.8 5.8 58 316-373 58-123 (296)
22 PF12850 Metallophos_2: Calcin 97.7 9.1E-05 2E-09 64.3 7.3 59 287-371 1-59 (156)
23 cd00838 MPP_superfamily metall 97.6 0.00017 3.8E-09 59.3 6.3 53 324-377 24-76 (131)
24 cd07401 MPP_TMEM62_N Homo sapi 97.5 0.00025 5.3E-09 68.5 7.4 48 325-372 32-89 (256)
25 cd07388 MPP_Tt1561 Thermus the 97.5 0.00039 8.4E-09 66.3 8.0 69 286-371 4-74 (224)
26 cd00841 MPP_YfcE Escherichia c 97.4 0.00039 8.4E-09 61.1 6.4 60 288-373 1-60 (155)
27 cd08165 MPP_MPPE1 human MPPE1 97.2 0.001 2.2E-08 59.6 6.9 55 318-373 31-90 (156)
28 cd07384 MPP_Cdc1_like Saccharo 97.2 0.00093 2E-08 60.8 6.5 59 316-375 36-103 (171)
29 COG1409 Icc Predicted phosphoh 97.2 0.0013 2.7E-08 62.7 7.7 77 287-373 1-79 (301)
30 TIGR00619 sbcd exonuclease Sbc 97.1 0.0012 2.5E-08 63.8 7.1 83 287-372 1-88 (253)
31 cd08163 MPP_Cdc1 Saccharomyces 97.1 0.0012 2.6E-08 64.1 6.7 49 325-374 44-99 (257)
32 cd07393 MPP_DR1119 Deinococcus 97.0 0.0015 3.2E-08 62.0 6.9 76 290-371 2-83 (232)
33 cd07379 MPP_239FB Homo sapiens 97.0 0.0013 2.9E-08 56.7 5.6 65 288-374 1-65 (135)
34 TIGR00040 yfcE phosphoesterase 96.9 0.0022 4.7E-08 56.9 6.6 64 287-372 1-64 (158)
35 cd07392 MPP_PAE1087 Pyrobaculu 96.9 0.0025 5.4E-08 57.0 6.8 44 325-372 22-65 (188)
36 TIGR03729 acc_ester putative p 96.9 0.0031 6.7E-08 59.9 7.6 72 288-372 1-74 (239)
37 PRK09453 phosphodiesterase; Pr 96.8 0.0038 8.3E-08 56.8 7.4 69 288-373 2-77 (182)
38 PRK05340 UDP-2,3-diacylglucosa 96.8 0.0045 9.8E-08 59.0 8.0 76 288-372 2-83 (241)
39 PF00041 fn3: Fibronectin type 96.8 0.0031 6.6E-08 48.7 5.4 74 168-262 2-77 (85)
40 cd07404 MPP_MS158 Microscilla 96.7 0.0014 2.9E-08 58.5 3.7 44 325-372 25-68 (166)
41 cd07397 MPP_DevT Myxococcus xa 96.6 0.0048 1E-07 59.4 6.6 65 287-374 1-65 (238)
42 cd08166 MPP_Cdc1_like_1 unchar 96.6 0.006 1.3E-07 57.1 6.8 50 325-374 41-95 (195)
43 PRK10966 exonuclease subunit S 96.6 0.006 1.3E-07 63.1 7.4 81 287-372 1-87 (407)
44 TIGR01854 lipid_A_lpxH UDP-2,3 96.5 0.0079 1.7E-07 57.0 7.4 75 290-373 2-82 (231)
45 COG0420 SbcD DNA repair exonuc 96.5 0.005 1.1E-07 62.7 6.1 86 287-374 1-90 (390)
46 cd07424 MPP_PrpA_PrpB PrpA and 96.5 0.0086 1.9E-07 55.7 7.2 63 288-372 2-67 (207)
47 PRK00166 apaH diadenosine tetr 96.3 0.011 2.4E-07 58.1 7.4 65 288-372 2-69 (275)
48 cd07423 MPP_PrpE Bacillus subt 96.3 0.012 2.6E-07 55.9 7.6 67 288-372 2-80 (234)
49 PHA02546 47 endonuclease subun 96.2 0.012 2.5E-07 59.3 7.3 84 287-373 1-90 (340)
50 TIGR00583 mre11 DNA repair pro 96.2 0.018 3.9E-07 59.6 8.4 85 286-373 3-124 (405)
51 PHA02239 putative protein phos 96.1 0.018 3.9E-07 55.2 7.7 66 288-372 2-73 (235)
52 cd07390 MPP_AQ1575 Aquifex aeo 96.1 0.0087 1.9E-07 53.9 4.9 51 318-374 34-84 (168)
53 cd07394 MPP_Vps29 Homo sapiens 96.1 0.016 3.4E-07 53.1 6.7 65 288-372 1-65 (178)
54 PRK13625 bis(5'-nucleosyl)-tet 96.1 0.019 4.1E-07 55.2 7.5 67 288-372 2-79 (245)
55 TIGR00024 SbcD_rel_arch putati 96.1 0.011 2.3E-07 56.5 5.6 85 287-373 15-103 (225)
56 KOG3662 Cell division control 96.0 0.023 5E-07 58.5 8.3 85 284-375 46-147 (410)
57 cd07425 MPP_Shelphs Shewanella 96.0 0.021 4.6E-07 53.5 7.4 69 290-373 1-81 (208)
58 cd07413 MPP_PA3087 Pseudomonas 95.8 0.028 6E-07 53.2 7.4 66 289-372 1-76 (222)
59 PRK09968 serine/threonine-spec 95.8 0.025 5.3E-07 53.4 7.0 63 287-371 15-80 (218)
60 cd07391 MPP_PF1019 Pyrococcus 95.8 0.023 4.9E-07 51.3 6.3 60 315-375 28-91 (172)
61 PRK11439 pphA serine/threonine 95.7 0.025 5.3E-07 53.3 6.4 61 288-371 18-82 (218)
62 KOG4221 Receptor mediating net 95.6 0.19 4.2E-06 57.6 13.8 134 125-279 570-712 (1381)
63 cd00063 FN3 Fibronectin type 3 95.6 0.12 2.6E-06 38.7 8.8 37 240-276 56-92 (93)
64 cd07403 MPP_TTHA0053 Thermus t 95.6 0.02 4.3E-07 49.5 4.8 44 318-371 14-57 (129)
65 cd07386 MPP_DNA_pol_II_small_a 95.5 0.027 6E-07 53.6 6.0 47 326-372 35-94 (243)
66 COG1408 Predicted phosphohydro 95.4 0.066 1.4E-06 52.9 8.3 79 285-375 43-121 (284)
67 cd07421 MPP_Rhilphs Rhilph pho 95.2 0.052 1.1E-06 54.0 6.9 76 288-378 3-86 (304)
68 cd07422 MPP_ApaH Escherichia c 95.0 0.067 1.5E-06 52.1 7.2 64 290-373 2-68 (257)
69 cd08164 MPP_Ted1 Saccharomyces 95.0 0.07 1.5E-06 49.9 6.9 49 325-374 43-113 (193)
70 cd07398 MPP_YbbF-LpxH Escheric 95.0 0.078 1.7E-06 48.8 7.1 76 290-374 1-84 (217)
71 PRK04036 DNA polymerase II sma 94.9 0.1 2.2E-06 55.5 8.7 81 285-372 242-343 (504)
72 PF14582 Metallophos_3: Metall 94.7 0.055 1.2E-06 51.9 5.5 70 287-371 6-101 (255)
73 cd00144 MPP_PPP_family phospho 94.4 0.11 2.3E-06 48.2 6.5 66 290-373 1-69 (225)
74 cd00845 MPP_UshA_N_like Escher 94.1 0.091 2E-06 49.8 5.5 81 287-374 1-84 (252)
75 cd00844 MPP_Dbr1_N Dbr1 RNA la 93.8 0.15 3.3E-06 49.7 6.6 47 325-371 27-85 (262)
76 KOG0196 Tyrosine kinase, EPH ( 93.7 0.86 1.9E-05 50.7 12.6 40 241-280 498-537 (996)
77 KOG3770 Acid sphingomyelinase 93.5 0.11 2.4E-06 55.6 5.3 57 316-372 200-263 (577)
78 cd07389 MPP_PhoD Bacillus subt 93.1 0.11 2.5E-06 48.4 4.2 53 325-377 28-107 (228)
79 TIGR00668 apaH bis(5'-nucleosy 93.0 0.25 5.4E-06 48.8 6.6 64 288-372 2-69 (279)
80 cd07412 MPP_YhcR_N Bacillus su 92.9 0.26 5.6E-06 48.4 6.7 85 287-374 1-90 (288)
81 cd07420 MPP_RdgC Drosophila me 92.4 0.39 8.5E-06 48.3 7.2 68 288-373 52-124 (321)
82 KOG3513 Neural cell adhesion m 92.0 11 0.00024 43.5 18.5 193 49-281 718-917 (1051)
83 cd07408 MPP_SA0022_N Staphyloc 92.0 0.35 7.6E-06 46.5 6.1 81 287-374 1-84 (257)
84 smart00060 FN3 Fibronectin typ 91.7 1.6 3.5E-05 31.3 8.3 22 240-261 56-77 (83)
85 cd07382 MPP_DR1281 Deinococcus 91.7 0.34 7.4E-06 47.1 5.7 70 288-374 1-72 (255)
86 COG0622 Predicted phosphoester 91.0 0.53 1.2E-05 43.2 5.9 65 287-373 2-66 (172)
87 cd07406 MPP_CG11883_N Drosophi 90.5 0.53 1.1E-05 45.3 5.8 81 287-374 1-85 (257)
88 PF07888 CALCOCO1: Calcium bin 89.8 2.2 4.8E-05 45.8 10.1 93 64-178 22-124 (546)
89 cd07418 MPP_PP7 PP7, metalloph 89.5 1.1 2.4E-05 46.1 7.4 68 288-373 67-139 (377)
90 smart00156 PP2Ac Protein phosp 89.5 1.4 3.1E-05 43.1 7.9 67 288-372 29-99 (271)
91 cd07411 MPP_SoxB_N Thermus the 89.3 0.81 1.8E-05 44.1 6.0 59 314-374 35-97 (264)
92 cd07416 MPP_PP2B PP2B, metallo 89.1 1.4 3E-05 44.0 7.6 67 288-372 44-114 (305)
93 cd07410 MPP_CpdB_N Escherichia 88.7 1.2 2.6E-05 43.1 6.7 84 287-374 1-97 (277)
94 TIGR00282 metallophosphoestera 88.6 0.79 1.7E-05 45.0 5.4 71 288-375 2-74 (266)
95 KOG3947 Phosphoesterases [Gene 88.3 1.4 3E-05 43.5 6.7 66 287-376 62-130 (305)
96 cd07415 MPP_PP2A_PP4_PP6 PP2A, 88.3 1.7 3.7E-05 43.0 7.5 67 288-372 43-113 (285)
97 PF10179 DUF2369: Uncharacteri 88.1 8 0.00017 38.7 12.1 93 163-261 169-280 (300)
98 KOG4221 Receptor mediating net 87.4 8.4 0.00018 44.9 13.0 128 125-279 480-612 (1381)
99 cd07380 MPP_CWF19_N Schizosacc 86.9 0.9 2E-05 40.7 4.3 54 315-370 15-68 (150)
100 cd07419 MPP_Bsu1_C Arabidopsis 86.6 2.3 4.9E-05 42.5 7.5 66 289-372 50-127 (311)
101 cd07414 MPP_PP1_PPKL PP1, PPKL 86.5 2.2 4.8E-05 42.3 7.2 67 288-372 51-121 (293)
102 PTZ00239 serine/threonine prot 85.9 2.7 5.8E-05 42.0 7.5 66 289-372 45-114 (303)
103 PRK09419 bifunctional 2',3'-cy 85.7 1.7 3.7E-05 50.8 6.9 79 283-375 657-739 (1163)
104 COG2129 Predicted phosphoester 85.7 2.7 5.9E-05 40.2 7.0 69 286-370 3-75 (226)
105 cd07417 MPP_PP5_C PP5, C-termi 85.4 2.9 6.3E-05 42.0 7.5 64 288-372 61-132 (316)
106 PTZ00244 serine/threonine-prot 83.9 3.1 6.7E-05 41.4 6.9 66 289-372 54-123 (294)
107 COG2908 Uncharacterized protei 83.1 2.1 4.6E-05 41.3 5.1 71 291-371 2-79 (237)
108 PTZ00480 serine/threonine-prot 81.7 4.5 9.8E-05 40.7 7.1 67 288-372 60-130 (320)
109 cd07405 MPP_UshA_N Escherichia 81.1 3.9 8.4E-05 40.1 6.4 82 287-375 1-90 (285)
110 COG0737 UshA 5'-nucleotidase/2 79.4 3.3 7.1E-05 44.0 5.6 96 277-375 17-118 (517)
111 TIGR03768 RPA4764 metallophosp 79.3 2.7 5.9E-05 44.4 4.8 48 325-373 98-171 (492)
112 PRK11907 bifunctional 2',3'-cy 78.8 4.7 0.0001 45.6 6.7 99 275-374 104-215 (814)
113 COG1692 Calcineurin-like phosp 78.4 4.8 0.0001 39.2 5.8 71 287-373 1-72 (266)
114 PRK09558 ushA bifunctional UDP 78.2 3.8 8.1E-05 44.0 5.6 82 285-375 33-124 (551)
115 cd07409 MPP_CD73_N CD73 ecto-5 78.1 6.1 0.00013 38.6 6.6 59 314-374 34-96 (281)
116 COG4186 Predicted phosphoester 77.3 8.8 0.00019 35.1 6.7 51 318-373 37-87 (186)
117 TIGR01530 nadN NAD pyrophospha 73.6 8.3 0.00018 41.5 6.7 46 328-375 51-97 (550)
118 cd08162 MPP_PhoA_N Synechococc 72.3 9.8 0.00021 38.0 6.5 12 364-375 83-94 (313)
119 COG1768 Predicted phosphohydro 69.3 7 0.00015 36.6 4.3 47 325-374 42-88 (230)
120 cd07407 MPP_YHR202W_N Saccharo 65.9 5.3 0.00012 39.3 3.0 86 286-373 5-98 (282)
121 COG1407 Predicted ICC-like pho 65.4 17 0.00036 35.2 6.2 84 288-374 21-112 (235)
122 TIGR03767 P_acnes_RR metalloph 60.7 13 0.00029 39.5 5.0 14 359-372 183-196 (496)
123 TIGR01390 CycNucDiestase 2',3' 59.7 22 0.00048 39.0 6.7 86 287-374 3-101 (626)
124 cd07387 MPP_PolD2_C PolD2 (DNA 57.7 15 0.00033 35.9 4.5 47 326-372 42-107 (257)
125 PRK09418 bifunctional 2',3'-cy 55.8 45 0.00097 37.7 8.3 53 286-339 39-96 (780)
126 KOG3513 Neural cell adhesion m 55.8 1.7E+02 0.0037 34.3 12.8 132 127-281 577-715 (1051)
127 PRK09420 cpdB bifunctional 2', 51.8 47 0.001 36.7 7.6 88 285-374 24-124 (649)
128 KOG2310 DNA repair exonuclease 48.9 31 0.00068 37.3 5.3 51 286-340 13-66 (646)
129 cd02856 Glycogen_debranching_e 47.9 26 0.00057 28.7 3.8 23 238-260 44-66 (103)
130 PRK09419 bifunctional 2',3'-cy 47.4 32 0.00069 40.5 5.8 87 286-374 41-141 (1163)
131 COG1311 HYS2 Archaeal DNA poly 45.5 73 0.0016 34.0 7.4 82 285-372 224-321 (481)
132 cd02852 Isoamylase_N_term Isoa 44.3 28 0.00062 29.2 3.6 23 238-260 48-70 (119)
133 PF04042 DNA_pol_E_B: DNA poly 44.0 39 0.00084 31.0 4.7 76 289-374 1-93 (209)
134 cd02860 Pullulanase_N_term Pul 43.0 33 0.00072 27.9 3.7 25 237-261 45-69 (100)
135 cd02853 MTHase_N_term Maltooli 42.5 35 0.00075 27.0 3.7 21 239-260 40-60 (85)
136 PF07353 Uroplakin_II: Uroplak 42.4 29 0.00063 31.7 3.4 35 243-280 104-140 (184)
137 PF13277 YmdB: YmdB-like prote 39.5 35 0.00077 33.3 3.8 41 325-373 26-69 (253)
138 PF09294 Interfer-bind: Interf 37.6 48 0.001 26.7 3.9 34 242-275 68-103 (106)
139 PTZ00235 DNA polymerase epsilo 37.4 1.5E+02 0.0032 29.7 7.8 87 271-371 15-121 (291)
140 KOG0372 Serine/threonine speci 34.2 1.1E+02 0.0023 30.3 6.1 72 289-378 45-120 (303)
141 PF02922 CBM_48: Carbohydrate- 25.4 86 0.0019 24.2 3.3 23 239-261 49-73 (85)
142 KOG4258 Insulin/growth factor 24.7 3E+02 0.0065 31.7 8.2 121 168-295 488-623 (1025)
143 KOG0373 Serine/threonine speci 23.6 77 0.0017 30.8 3.0 70 289-377 48-122 (306)
144 PF10179 DUF2369: Uncharacteri 22.6 71 0.0015 32.0 2.8 18 242-259 16-33 (300)
145 PF13205 Big_5: Bacterial Ig-l 21.9 1.3E+02 0.0029 23.9 3.9 16 246-261 70-85 (107)
146 COG0296 GlgB 1,4-alpha-glucan 20.8 1.1E+02 0.0024 33.8 4.0 51 240-296 74-124 (628)
No 1
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.5e-40 Score=333.62 Aligned_cols=184 Identities=39% Similarity=0.606 Sum_probs=149.4
Q ss_pred CCCCcccEeeeCCCCCeEEEEEEeCCCCCCCccEEEEeecCCCCccccccceEEeccccCCCCCccccccCCceEEEEEe
Q 016427 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (390)
Q Consensus 166 ~~~P~qvhLa~~~d~~~m~VtW~T~~~~~~~~~~V~yG~~~~~~~~~~a~t~Ty~~~~mcg~PA~t~g~rdpg~iH~a~L 245 (390)
.+.|+|+||++++..++|+|+|.|.+. ....|+||..++......+ ......+|++... +|+..|++|+|+|
T Consensus 42 ~~~peQvhlS~~~~~~~m~VswvT~~~---~~~~V~Yg~~~~~~~~~~~---~~~~~~~~~~y~~--~~~~sg~ih~~~~ 113 (452)
T KOG1378|consen 42 VNSPEQVHLSFTDNLNEMRVSWVTGDG---EENVVRYGEVKDKLDNSAA---RGMTEAWTDGYAN--GWRDSGYIHDAVM 113 (452)
T ss_pred CCCCCeEEEeccCCCCcEEEEEeCCCC---CCceEEEeecCCCcccccc---ccceEEEeccccc--ccceeeeEeeeee
Confidence 378999999999988899999999984 3489999977655332221 1122223444332 5678999999999
Q ss_pred CCCCCCCEEEEEEceecCCCCccccceEEEEeCCCCCCCCCeEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcC
Q 016427 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK 325 (390)
Q Consensus 246 tgL~PgT~Y~YrVG~~~~dg~~~wS~~~sF~T~P~~g~~~~~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~ 325 (390)
++|+|+|+||||||++ ..||++|+|+|+| +++.+.+|++|||||+.+.+. ++..+..+.+
T Consensus 114 ~~L~~~t~YyY~~Gs~-----~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~-------------s~~~~~~~~~ 173 (452)
T KOG1378|consen 114 KNLEPNTRYYYQVGSD-----LKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYT-------------STLRNQEENL 173 (452)
T ss_pred cCCCCCceEEEEeCCC-----CCcccceEeECCC--CccCceeEEEEcccccccccc-------------chHhHHhccc
Confidence 9999999999999998 3599999999999 455789999999999987532 2344444445
Q ss_pred CccEEEEeCccccccCCc-hhHHHHHHhhhhHhccceEEEeecCccccccCCC
Q 016427 326 NIDIVFHIGDICYANGYI-SQWDQFTAQIEPIASTVPYMIARFVIIHYVAHQL 377 (390)
Q Consensus 326 ~~DfVlhiGDisYa~G~~-~~WD~F~~~iepias~vPymva~GNHE~~~~~~~ 377 (390)
++|+|+|+|||+||+++. .+||+|++++||+|+.+|||++.||||+++.+..
T Consensus 174 k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~ 226 (452)
T KOG1378|consen 174 KPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP 226 (452)
T ss_pred CCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCceEEecccccccCCCcc
Confidence 799999999999999998 6999999999999999999999999999998643
No 2
>PLN02533 probable purple acid phosphatase
Probab=100.00 E-value=4.3e-37 Score=315.40 Aligned_cols=174 Identities=25% Similarity=0.400 Sum_probs=147.3
Q ss_pred CCCCCCcccEeeeCCCCCeEEEEEEeCCCCCCCccEEEEeecCCCCccccccc-eEEeccccCCCCCccccccCCceEEE
Q 016427 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGT-LTFGRGSMCGAPARTVGWRDPGYIHT 242 (390)
Q Consensus 164 ~~~~~P~qvhLa~~~d~~~m~VtW~T~~~~~~~~~~V~yG~~~~~~~~~~a~t-~Ty~~~~mcg~PA~t~g~rdpg~iH~ 242 (390)
+++..|+||||++++ +++|+|+|+|... ..+.|+||++++.+..++.++ .+|... ..| .+|++|+
T Consensus 39 ~~~~~P~qvhls~~~-~~~m~V~W~T~~~---~~~~V~yG~~~~~l~~~a~g~~~~~~~~---------~~~-~~g~iH~ 104 (427)
T PLN02533 39 DDPTHPDQVHISLVG-PDKMRISWITQDS---IPPSVVYGTVSGKYEGSANGTSSSYHYL---------LIY-RSGQIND 104 (427)
T ss_pred CCCCCCceEEEEEcC-CCeEEEEEECCCC---CCCEEEEecCCCCCcceEEEEEEEEecc---------ccc-cCCeEEE
Confidence 577899999999997 7999999999974 468999999988777666554 457632 123 3799999
Q ss_pred EEeCCCCCCCEEEEEEceecCCCCccccceEEEEeCCCCCCCCCeEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHH
Q 016427 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQ 322 (390)
Q Consensus 243 a~LtgL~PgT~Y~YrVG~~~~dg~~~wS~~~sF~T~P~~g~~~~~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~ 322 (390)
|+|+||+|+|+|+||||+. .+|++|+|+|+|.. .++||+++||||..+. ...+++++.+
T Consensus 105 v~l~~L~p~T~Y~Yrvg~~------~~s~~~~F~T~p~~---~~~~f~v~GDlG~~~~------------~~~tl~~i~~ 163 (427)
T PLN02533 105 VVIGPLKPNTVYYYKCGGP------SSTQEFSFRTPPSK---FPIKFAVSGDLGTSEW------------TKSTLEHVSK 163 (427)
T ss_pred EEeCCCCCCCEEEEEECCC------CCccceEEECCCCC---CCeEEEEEEeCCCCcc------------cHHHHHHHHh
Confidence 9999999999999999964 46899999999853 4699999999986532 1356777765
Q ss_pred HcCCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEEeecCcccccc
Q 016427 323 DLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIARFVIIHYVA 374 (390)
Q Consensus 323 ~~~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymva~GNHE~~~~ 374 (390)
.++|||+|+|||+|+++++.+||+|+++++++++++|+|+++||||.+..
T Consensus 164 --~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~ 213 (427)
T PLN02533 164 --WDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKI 213 (427)
T ss_pred --cCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCceEEeCcccccccc
Confidence 68999999999999999999999999999999999999999999998753
No 3
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=99.48 E-value=6.1e-14 Score=135.95 Aligned_cols=79 Identities=42% Similarity=0.712 Sum_probs=68.5
Q ss_pred CCeEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcCCccEEEEeCccccccCCc--hhHHHHHHhhhhHhccceE
Q 016427 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYI--SQWDQFTAQIEPIASTVPY 362 (390)
Q Consensus 285 ~~~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~DfVlhiGDisYa~G~~--~~WD~F~~~iepias~vPy 362 (390)
.++||+++||||.... .+.+++++|+++..++|||+|.|||+|+.+.. .+|+.|++.++++.+.+|+
T Consensus 3 ~~~~f~v~gD~~~~~~-----------~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 71 (294)
T cd00839 3 TPFKFAVFGDMGQNTN-----------NSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPY 71 (294)
T ss_pred CcEEEEEEEECCCCCC-----------CcHHHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCc
Confidence 4699999999997421 24688899988667899999999999998875 8999999999999999999
Q ss_pred EEeecCcccccc
Q 016427 363 MIARFVIIHYVA 374 (390)
Q Consensus 363 mva~GNHE~~~~ 374 (390)
|+++||||....
T Consensus 72 ~~~~GNHD~~~~ 83 (294)
T cd00839 72 MVTPGNHEADYN 83 (294)
T ss_pred EEcCcccccccC
Confidence 999999998654
No 4
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.33 E-value=1.1e-11 Score=126.69 Aligned_cols=131 Identities=16% Similarity=0.241 Sum_probs=102.3
Q ss_pred ceEEEEEeCCCCCCCEEEEEEceecCCCCccccceEEEEeCCCCCCCCCeEEEEEecCCCCCCCCCCcccccccCcHHHH
Q 016427 238 GYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTT 317 (390)
Q Consensus 238 g~iH~a~LtgL~PgT~Y~YrVG~~~~dg~~~wS~~~sF~T~P~~g~~~~~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~ 317 (390)
.+-+++.++||+|++.|+||+... ..-|....|||+|+++.+ .+|+.|||...... +.+-.++.
T Consensus 98 dhtv~v~~~gL~P~~~yfYRf~~~-----~~~spvGrtrTapa~~~~--i~~~~fa~ascQ~~---------~~gy~~aY 161 (522)
T COG3540 98 DHTVHVDLRGLSPDQDYFYRFKAG-----DERSPVGRTRTAPAPGRA--IRFVWFADASCQGW---------EIGYMTAY 161 (522)
T ss_pred CceEEEeccCCCCCceEEEEEeeC-----CccccccccccCCCCCCc--chhhhhhhcccccc---------ccchhHHH
Confidence 588999999999999999999986 356899999999998765 89999999977643 22334566
Q ss_pred HHHHHHcCCccEEEEeCccccccCC-----------------------------chhHHHHH--HhhhhHhccceEEEee
Q 016427 318 RQLIQDLKNIDIVFHIGDICYANGY-----------------------------ISQWDQFT--AQIEPIASTVPYMIAR 366 (390)
Q Consensus 318 ~~l~~~~~~~DfVlhiGDisYa~G~-----------------------------~~~WD~F~--~~iepias~vPymva~ 366 (390)
+.|.+ .++||+||.||..|+.|- ..+|-++. +.++-.-+..|+++..
T Consensus 162 ~~ma~--~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~W 239 (522)
T COG3540 162 KTMAK--EEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQW 239 (522)
T ss_pred HHHHh--cCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEe
Confidence 77766 679999999999998652 22333333 2456677899999999
Q ss_pred cCccccccCCCCCCCCCCcc
Q 016427 367 FVIIHYVAHQLGTALTGPKL 386 (390)
Q Consensus 367 GNHE~~~~~~~g~~~~~~~~ 386 (390)
-.||++++-..++.+.-+.+
T Consensus 240 DDHEv~NN~~~~~~~nD~~~ 259 (522)
T COG3540 240 DDHEVANNWSNSIDENDSRY 259 (522)
T ss_pred ccccccccccccccccCCCC
Confidence 99999998878877755433
No 5
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.29 E-value=3.2e-11 Score=124.95 Aligned_cols=122 Identities=15% Similarity=0.184 Sum_probs=65.9
Q ss_pred CceEEEEEeCCCCCCCEEEEEEceecCCCCccccceEEEEeCCCCCCCCCeEEEEEecCCCCCCCCCCcccccccCcHHH
Q 016427 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNT 316 (390)
Q Consensus 237 pg~iH~a~LtgL~PgT~Y~YrVG~~~~dg~~~wS~~~sF~T~P~~g~~~~~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T 316 (390)
..+.+++.++||+|+|+|+||+.... ....|....|+|+|.... ..+||+++++.+.... ....
T Consensus 60 ~d~t~~v~v~gL~p~t~Y~Y~~~~~~---~~~~s~~g~~rT~p~~~~-~~~r~a~~SC~~~~~~------------~~~~ 123 (453)
T PF09423_consen 60 RDFTVKVDVTGLQPGTRYYYRFVVDG---GGQTSPVGRFRTAPDGDP-DPFRFAFGSCQNYEDG------------YFPA 123 (453)
T ss_dssp GTTEEEEEE-S--TT-EEEEEEEE-----TTEE---EEEE--TT------EEEEEE----CCC---------------HH
T ss_pred CCeEeecccCCCCCCceEEEEEEEec---CCCCCCceEEEcCCCCCC-CceEEEEECCCCcccC------------hHHH
Confidence 35889999999999999999999842 245688999999975433 3599999999864321 1355
Q ss_pred HHHHHHHcCCccEEEEeCccccccCC---------------------------chhHHHHH--HhhhhHhccceEEEeec
Q 016427 317 TRQLIQDLKNIDIVFHIGDICYANGY---------------------------ISQWDQFT--AQIEPIASTVPYMIARF 367 (390)
Q Consensus 317 ~~~l~~~~~~~DfVlhiGDisYa~G~---------------------------~~~WD~F~--~~iepias~vPymva~G 367 (390)
.+++++. .++||++|.||..|+++. ...|.++. ..++.+.+++|++.+.-
T Consensus 124 ~~~~a~~-~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwD 202 (453)
T PF09423_consen 124 YRRIAER-DDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWD 202 (453)
T ss_dssp HHHHTT--S--SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---
T ss_pred HHhhhcc-CCCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEcc
Confidence 6777763 589999999999998741 11233333 35677889999999999
Q ss_pred CccccccC
Q 016427 368 VIIHYVAH 375 (390)
Q Consensus 368 NHE~~~~~ 375 (390)
.||+..+-
T Consensus 203 DHdi~nn~ 210 (453)
T PF09423_consen 203 DHDIGNNW 210 (453)
T ss_dssp STTTSTT-
T ss_pred Cceecccc
Confidence 99986553
No 6
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=98.88 E-value=2.4e-09 Score=103.09 Aligned_cols=79 Identities=15% Similarity=0.225 Sum_probs=54.3
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcCCccEEEEeCccccccCC----chhH-HHHHHhhhhHhccce
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQW-DQFTAQIEPIASTVP 361 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~DfVlhiGDisYa~G~----~~~W-D~F~~~iepias~vP 361 (390)
+||+++||+|..... .|......+.+++++ .++|||+|.||++|++|. ...| +.|.+.++.+...+|
T Consensus 1 ~~f~~~gD~g~~~~~-------~~~~~~~~~~~~~~~-~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P 72 (277)
T cd07378 1 LRFLALGDWGGGGTA-------GQKAVAKAMAKVAAE-LGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVP 72 (277)
T ss_pred CeEEEEeecCCCCCH-------HHHHHHHHHHHHHHh-cCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCC
Confidence 479999999975211 122223333444443 689999999999999874 2344 345555555567899
Q ss_pred EEEeecCccccc
Q 016427 362 YMIARFVIIHYV 373 (390)
Q Consensus 362 ymva~GNHE~~~ 373 (390)
+|+++||||...
T Consensus 73 ~~~v~GNHD~~~ 84 (277)
T cd07378 73 WYLVLGNHDYSG 84 (277)
T ss_pred eEEecCCcccCC
Confidence 999999999874
No 7
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.66 E-value=5.4e-08 Score=91.31 Aligned_cols=77 Identities=16% Similarity=0.208 Sum_probs=58.3
Q ss_pred eEEEEEecCCCCCCCCCCcccccccC-cHHHHHHHHHHc--CCccEEEEeCccccccCCchhHHHHHHhhhhHh-ccceE
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRG-SLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA-STVPY 362 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~-s~~T~~~l~~~~--~~~DfVlhiGDisYa~G~~~~WD~F~~~iepia-s~vPy 362 (390)
|||++++|++..... .|. -...++++++.. .++|+|+|.|||++......+|+.+.+.++.+. +.+|+
T Consensus 1 f~~~~~~D~q~~~~~--------~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~ 72 (214)
T cd07399 1 FTLAVLPDTQYYTES--------YPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPY 72 (214)
T ss_pred CEEEEecCCCcCCcC--------CHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcE
Confidence 689999999875321 111 113445666554 579999999999976554678999999999887 77999
Q ss_pred EEeecCccc
Q 016427 363 MIARFVIIH 371 (390)
Q Consensus 363 mva~GNHE~ 371 (390)
++++||||.
T Consensus 73 ~~~~GNHD~ 81 (214)
T cd07399 73 SVLAGNHDL 81 (214)
T ss_pred EEECCCCcc
Confidence 999999994
No 8
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=98.54 E-value=2.2e-07 Score=78.22 Aligned_cols=78 Identities=12% Similarity=0.199 Sum_probs=51.4
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcCCccEEEEeCccccccCCchhHHHHH-HhhhhHhccceEEEe
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFT-AQIEPIASTVPYMIA 365 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~DfVlhiGDisYa~G~~~~WD~F~-~~iepias~vPymva 365 (390)
+||+++||++..... . .. .......... ..++|+|++.||+++.......+.... .........+|++++
T Consensus 1 ~ri~~isD~H~~~~~----~---~~-~~~~~~~~~~-~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (200)
T PF00149_consen 1 MRILVISDLHGGYDD----D---SD-AFRKLDEIAA-ENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFI 71 (200)
T ss_dssp EEEEEEEBBTTTHHH----H---CH-HHHHHHHHHH-HTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEE
T ss_pred CeEEEEcCCCCCCcc----h---hH-HHHHHHHHhc-cCCCCEEEeeccccccccccccchhhhccchhhhhcccccccc
Confidence 689999999876421 0 00 0111222222 378999999999998776554444333 345567889999999
Q ss_pred ecCccccc
Q 016427 366 RFVIIHYV 373 (390)
Q Consensus 366 ~GNHE~~~ 373 (390)
+||||...
T Consensus 72 ~GNHD~~~ 79 (200)
T PF00149_consen 72 LGNHDYYS 79 (200)
T ss_dssp E-TTSSHH
T ss_pred ccccccce
Confidence 99999875
No 9
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.52 E-value=2e-07 Score=89.34 Aligned_cols=88 Identities=14% Similarity=-0.034 Sum_probs=59.2
Q ss_pred CeEEEEEecCCCCCCCCCCccc-ccccCcHHHHHHHHHHc----CCccEEEEeCccccccCC----chhHHHHHHhhhhH
Q 016427 286 LQQVIIFGDMGKDEADGSNEYN-NFQRGSLNTTRQLIQDL----KNIDIVFHIGDICYANGY----ISQWDQFTAQIEPI 356 (390)
Q Consensus 286 ~~~f~vfGDmG~~~~dgs~~~~-~~qp~s~~T~~~l~~~~----~~~DfVlhiGDisYa~G~----~~~WD~F~~~iepi 356 (390)
+++|++.+|++.+..++..... ......+..++++++.+ +++|||++.|||++.... ..+|+.|.+.++.+
T Consensus 4 ~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~ 83 (262)
T cd07395 4 PFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLL 83 (262)
T ss_pred CEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhc
Confidence 5999999999887532211100 01112233445555443 489999999999986433 24677777777777
Q ss_pred hccceEEEeecCccccc
Q 016427 357 ASTVPYMIARFVIIHYV 373 (390)
Q Consensus 357 as~vPymva~GNHE~~~ 373 (390)
...+|+++++||||...
T Consensus 84 ~~~vp~~~i~GNHD~~~ 100 (262)
T cd07395 84 DPDIPLVCVCGNHDVGN 100 (262)
T ss_pred cCCCcEEEeCCCCCCCC
Confidence 77899999999999854
No 10
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.36 E-value=1.4e-06 Score=80.38 Aligned_cols=84 Identities=13% Similarity=0.202 Sum_probs=50.6
Q ss_pred CeEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcCCccEEEEeCccccccCCch-hHHHHHHhhhhHh-ccceEE
Q 016427 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYIS-QWDQFTAQIEPIA-STVPYM 363 (390)
Q Consensus 286 ~~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~DfVlhiGDisYa~G~~~-~WD~F~~~iepia-s~vPym 363 (390)
.+||+.++|++....................+.+++++ .++|+|++.||+++...... .+..|.+.++++. ..+|++
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDA-EKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWA 80 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhh-cCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEE
Confidence 38999999999764321100000011112233343433 68999999999998765432 2333334444544 369999
Q ss_pred EeecCcc
Q 016427 364 IARFVII 370 (390)
Q Consensus 364 va~GNHE 370 (390)
+++||||
T Consensus 81 ~~~GNHD 87 (199)
T cd07383 81 ATFGNHD 87 (199)
T ss_pred EECccCC
Confidence 9999999
No 11
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.28 E-value=1.9e-06 Score=83.34 Aligned_cols=83 Identities=19% Similarity=0.247 Sum_probs=51.4
Q ss_pred eEEEEEecCCCCCCC-CCCcccccccCcHHHHHHHHHHc--CCccEEEEeCccccccCCc--hhHHHHHHhhhhHhccce
Q 016427 287 QQVIIFGDMGKDEAD-GSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYI--SQWDQFTAQIEPIASTVP 361 (390)
Q Consensus 287 ~~f~vfGDmG~~~~d-gs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~G~~--~~WD~F~~~iepias~vP 361 (390)
|||++++|++....+ +.+.+ ...+...++++++++ .++|||++.|||++..... .+|+.+.+.++.+ .+|
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~---~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l--~~p 75 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRY---YRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRL--KGP 75 (267)
T ss_pred CeEEEEeccccccCCCcccch---HHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhc--CCC
Confidence 689999999954321 11111 112344556666554 4699999999999543221 3344444444332 489
Q ss_pred EEEeecCcccccc
Q 016427 362 YMIARFVIIHYVA 374 (390)
Q Consensus 362 ymva~GNHE~~~~ 374 (390)
+++++||||....
T Consensus 76 ~~~v~GNHD~~~~ 88 (267)
T cd07396 76 VHHVLGNHDLYNP 88 (267)
T ss_pred EEEecCccccccc
Confidence 9999999998643
No 12
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.16 E-value=4.3e-06 Score=78.53 Aligned_cols=79 Identities=9% Similarity=0.146 Sum_probs=53.1
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc----CCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEE
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL----KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~----~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPym 363 (390)
||++++|++.........+ -......++++++.+ .++|||++.|||++. +...+|..+.+.++.+ .+|++
T Consensus 1 r~~~iSDlH~~~~~~~~~~---~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~~--~~p~~ 74 (240)
T cd07402 1 LLAQISDLHLRADGEGALL---GVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD-GSPESYERLRELLAAL--PIPVY 74 (240)
T ss_pred CEEEEeCCccCCCCcceec---CcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC-CCHHHHHHHHHHHhhc--CCCEE
Confidence 6899999987643110000 011234445555542 489999999999965 3445677777777765 79999
Q ss_pred EeecCcccc
Q 016427 364 IARFVIIHY 372 (390)
Q Consensus 364 va~GNHE~~ 372 (390)
.++||||..
T Consensus 75 ~v~GNHD~~ 83 (240)
T cd07402 75 LLPGNHDDR 83 (240)
T ss_pred EeCCCCCCH
Confidence 999999973
No 13
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.11 E-value=7.3e-06 Score=79.52 Aligned_cols=90 Identities=9% Similarity=0.154 Sum_probs=57.9
Q ss_pred EEeCCCCCCCCCeEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc----CCccEEEEeCccccccCCchhHHHHH
Q 016427 275 FKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL----KNIDIVFHIGDICYANGYISQWDQFT 350 (390)
Q Consensus 275 F~T~P~~g~~~~~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~----~~~DfVlhiGDisYa~G~~~~WD~F~ 350 (390)
.++.+... .++||+.+.|++.....+ ...... .....++++++++ .++|||++.|||+. ++....+..|.
T Consensus 5 ~~~~~~~~--~~~~i~~iSD~Hl~~~~~-~~~~~~--~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~-~~~~~~~~~~~ 78 (275)
T PRK11148 5 LTLPLAGE--ARVRILQITDTHLFADEH-ETLLGV--NTWESYQAVLEAIRAQQHEFDLIVATGDLAQ-DHSSEAYQHFA 78 (275)
T ss_pred cccccCCC--CCEEEEEEcCcccCCCCC-Cceecc--CHHHHHHHHHHHHHhhCCCCCEEEECCCCCC-CCCHHHHHHHH
Confidence 45555432 359999999999643211 111000 1123444555432 47999999999996 44455677777
Q ss_pred HhhhhHhccceEEEeecCcccc
Q 016427 351 AQIEPIASTVPYMIARFVIIHY 372 (390)
Q Consensus 351 ~~iepias~vPymva~GNHE~~ 372 (390)
+.++.+ .+|+++++||||..
T Consensus 79 ~~l~~l--~~Pv~~v~GNHD~~ 98 (275)
T PRK11148 79 EGIAPL--RKPCVWLPGNHDFQ 98 (275)
T ss_pred HHHhhc--CCcEEEeCCCCCCh
Confidence 776655 58999999999973
No 14
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.03 E-value=1.4e-05 Score=74.15 Aligned_cols=75 Identities=11% Similarity=0.097 Sum_probs=52.1
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEE
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymv 364 (390)
+||++++|++..... ....++++++.+ .++|+|++.||+.+...... +.+.+.++.+.+..|++.
T Consensus 2 ~~i~~~sDlH~~~~~-----------~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~ 68 (223)
T cd07385 2 LRIAHLSDLHLGPFV-----------SRERLERLVEKINALKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYA 68 (223)
T ss_pred CEEEEEeecCCCccC-----------CHHHHHHHHHHHhccCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEE
Confidence 799999999875321 112334444432 57999999999997654332 355555666667799999
Q ss_pred eecCcccccc
Q 016427 365 ARFVIIHYVA 374 (390)
Q Consensus 365 a~GNHE~~~~ 374 (390)
++||||....
T Consensus 69 v~GNHD~~~~ 78 (223)
T cd07385 69 VLGNHDYYSG 78 (223)
T ss_pred ECCCcccccC
Confidence 9999998654
No 15
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=98.02 E-value=1.1e-05 Score=82.46 Aligned_cols=86 Identities=12% Similarity=0.157 Sum_probs=56.5
Q ss_pred EEeCCCCCCCCCeEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcCCccEEEEeCccccccC----CchhHHHHH
Q 016427 275 FKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANG----YISQWDQFT 350 (390)
Q Consensus 275 F~T~P~~g~~~~~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~DfVlhiGDisYa~G----~~~~WD~F~ 350 (390)
|.+...... .++|+++||+|.... .|..-.+.+.++.++ .++|||+..||.- .+| ...+|..-|
T Consensus 17 ~~~~~~~~~--~l~F~~vGDwG~g~~--------~Q~~VA~~M~~~~~~-~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~F 84 (394)
T PTZ00422 17 FISSYSVKA--QLRFASLGNWGTGSK--------QQKLVASYLKQYAKN-ERVTFLVSPGSNF-PGGVDGLNDPKWKHCF 84 (394)
T ss_pred EEeecccCC--eEEEEEEecCCCCch--------hHHHHHHHHHHHHHh-CCCCEEEECCccc-cCCCCCccchhHHhhH
Confidence 454443322 489999999996421 132223334444443 6899999999996 455 356787755
Q ss_pred Hhh-hhHh--ccceEEEeecCcccc
Q 016427 351 AQI-EPIA--STVPYMIARFVIIHY 372 (390)
Q Consensus 351 ~~i-epia--s~vPymva~GNHE~~ 372 (390)
+.+ .+.. -.+||+++.||||..
T Consensus 85 E~vY~~~s~~L~~Pwy~vLGNHDy~ 109 (394)
T PTZ00422 85 ENVYSEESGDMQIPFFTVLGQADWD 109 (394)
T ss_pred hhhccCcchhhCCCeEEeCCccccc
Confidence 543 3333 579999999999974
No 16
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.93 E-value=2.7e-05 Score=71.87 Aligned_cols=87 Identities=9% Similarity=0.104 Sum_probs=56.5
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEEEEeCccccccC-CchhHHHHHHhhhhHh-ccceEE
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANG-YISQWDQFTAQIEPIA-STVPYM 363 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~G-~~~~WD~F~~~iepia-s~vPym 363 (390)
||+.++|++...................+++++++.. .++|+|++.||+..... ....+..+.+.++.+. +.+|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 5899999987643211100000111244566666543 58999999999986543 2345667777777665 589999
Q ss_pred EeecCcccccc
Q 016427 364 IARFVIIHYVA 374 (390)
Q Consensus 364 va~GNHE~~~~ 374 (390)
+++||||....
T Consensus 81 ~~~GNHD~~~~ 91 (223)
T cd00840 81 IIAGNHDSPSR 91 (223)
T ss_pred EecCCCCCccc
Confidence 99999997764
No 17
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=97.86 E-value=1.7e-05 Score=76.93 Aligned_cols=90 Identities=21% Similarity=0.249 Sum_probs=57.7
Q ss_pred EEeCCCCCCCCCeEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcCCccEEEEeCccccccCCchhHHH-HHHhh
Q 016427 275 FKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQ-FTAQI 353 (390)
Q Consensus 275 F~T~P~~g~~~~~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~DfVlhiGDisYa~G~~~~WD~-F~~~i 353 (390)
|.-++. ++..++|+++||.|... .|+ |.....++..|.++ -++|||+..||.-|++|-..+-|- |-+..
T Consensus 34 l~~p~~--~dgslsflvvGDwGr~g-----~~n--qs~va~qmg~ige~-l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF 103 (336)
T KOG2679|consen 34 LYDPAK--SDGSLSFLVVGDWGRRG-----SFN--QSQVALQMGEIGEK-LDIDFVLSTGDNFYDTGLTSENDPRFQDSF 103 (336)
T ss_pred hcCCCC--CCCceEEEEEcccccCC-----chh--HHHHHHHHHhHHHh-ccceEEEecCCcccccCCCCCCChhHHhhh
Confidence 444433 34569999999999543 232 22222333444433 579999999999999996554443 33334
Q ss_pred hhHh----ccceEEEeecCcccccc
Q 016427 354 EPIA----STVPYMIARFVIIHYVA 374 (390)
Q Consensus 354 epia----s~vPymva~GNHE~~~~ 374 (390)
+.+. -++||..+.||||+-.+
T Consensus 104 ~nIYT~pSLQkpWy~vlGNHDyrGn 128 (336)
T KOG2679|consen 104 ENIYTAPSLQKPWYSVLGNHDYRGN 128 (336)
T ss_pred hhcccCcccccchhhhccCccccCc
Confidence 4432 24699999999997644
No 18
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=97.85 E-value=7.7e-05 Score=72.55 Aligned_cols=76 Identities=14% Similarity=0.144 Sum_probs=53.2
Q ss_pred CeEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEE
Q 016427 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (390)
Q Consensus 286 ~~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPym 363 (390)
++|+++++|++..... + ...++++++.. .++|+|++.||+.+.. ....++.+.+.++.+.+..|++
T Consensus 49 ~~rI~~lSDlH~~~~~---------~--~~~l~~~v~~i~~~~pDlVli~GD~~d~~-~~~~~~~~~~~L~~L~~~~pv~ 116 (271)
T PRK11340 49 PFKILFLADLHYSRFV---------P--LSLISDAIALGIEQKPDLILLGGDYVLFD-MPLNFSAFSDVLSPLAECAPTF 116 (271)
T ss_pred CcEEEEEcccCCCCcC---------C--HHHHHHHHHHHHhcCCCEEEEccCcCCCC-ccccHHHHHHHHHHHhhcCCEE
Confidence 5999999999864211 1 12234444332 5899999999998622 2234566777777777778999
Q ss_pred EeecCccccc
Q 016427 364 IARFVIIHYV 373 (390)
Q Consensus 364 va~GNHE~~~ 373 (390)
.+.||||.+.
T Consensus 117 ~V~GNHD~~~ 126 (271)
T PRK11340 117 ACFGNHDRPV 126 (271)
T ss_pred EecCCCCccc
Confidence 9999999753
No 19
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=97.82 E-value=3.7e-05 Score=66.71 Aligned_cols=46 Identities=11% Similarity=0.176 Sum_probs=35.8
Q ss_pred CCccEEEEeCccccccCCchhHHHHHHhhhhHhcc-ceEEEeecCccc
Q 016427 325 KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST-VPYMIARFVIIH 371 (390)
Q Consensus 325 ~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~-vPymva~GNHE~ 371 (390)
.++|+|++.||+++.. ...+|+.+.+.++.+... +|++.++||||.
T Consensus 34 ~~~d~vi~~GDl~~~~-~~~~~~~~~~~~~~l~~~~~~~~~v~GNHD~ 80 (144)
T cd07400 34 LDPDLVVITGDLTQRG-LPEEFEEAREFLDALPAPLEPVLVVPGNHDV 80 (144)
T ss_pred cCCCEEEECCCCCCCC-CHHHHHHHHHHHHHccccCCcEEEeCCCCeE
Confidence 5799999999999754 445666666666665554 799999999994
No 20
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=97.78 E-value=8.9e-05 Score=74.02 Aligned_cols=90 Identities=11% Similarity=0.131 Sum_probs=59.5
Q ss_pred CCCeEEEEEecCCCCCCCCCCcccccc--------cCcHHHHHHHHHHcCCccEEEEeCccccccCCchhHHHHHHhhhh
Q 016427 284 DSLQQVIIFGDMGKDEADGSNEYNNFQ--------RGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEP 355 (390)
Q Consensus 284 ~~~~~f~vfGDmG~~~~dgs~~~~~~q--------p~s~~T~~~l~~~~~~~DfVlhiGDisYa~G~~~~WD~F~~~iep 355 (390)
+.+||++-+.||+.+...+..-...++ ....+.++++++ .+++|||++.||+.+...-...=..++..+.|
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~-sE~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP 129 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLA-SEKPDLVVFTGDNIFGHSTQDAATSLMKAVAP 129 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHh-ccCCCEEEEeCCcccccccHhHHHHHHHHhhh
Confidence 346999999999876532221111111 112334555554 48999999999999874322112345678888
Q ss_pred -HhccceEEEeecCcccccc
Q 016427 356 -IASTVPYMIARFVIIHYVA 374 (390)
Q Consensus 356 -ias~vPymva~GNHE~~~~ 374 (390)
+.+.+||.+..||||.+.+
T Consensus 130 ~I~~~IPwA~~lGNHDdes~ 149 (379)
T KOG1432|consen 130 AIDRKIPWAAVLGNHDDESD 149 (379)
T ss_pred HhhcCCCeEEEecccccccc
Confidence 5788999999999998764
No 21
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=97.75 E-value=4.1e-05 Score=74.76 Aligned_cols=58 Identities=12% Similarity=0.080 Sum_probs=44.2
Q ss_pred HHHHHHHHcCCccEEEEeCccccccCCc------h--hHHHHHHhhhhHhccceEEEeecCccccc
Q 016427 316 TTRQLIQDLKNIDIVFHIGDICYANGYI------S--QWDQFTAQIEPIASTVPYMIARFVIIHYV 373 (390)
Q Consensus 316 T~~~l~~~~~~~DfVlhiGDisYa~G~~------~--~WD~F~~~iepias~vPymva~GNHE~~~ 373 (390)
+++.+.+..+++|||++.||+++..... . .|..+++.++.....+|+++++||||..-
T Consensus 58 ~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p 123 (296)
T cd00842 58 ALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYP 123 (296)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCc
Confidence 4444444446899999999999865321 1 36778888888889999999999999764
No 22
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=97.74 E-value=9.1e-05 Score=64.34 Aligned_cols=59 Identities=15% Similarity=0.293 Sum_probs=39.7
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcCCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEEee
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAR 366 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymva~ 366 (390)
.|++++||.+... ..++++++...++|+|++.||+... .++++.++.+ |+..+.
T Consensus 1 Mki~~~sD~H~~~---------------~~~~~~~~~~~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v~ 54 (156)
T PF12850_consen 1 MKIAVISDLHGNL---------------DALEAVLEYINEPDFVIILGDIFDP-------EEVLELLRDI----PVYVVR 54 (156)
T ss_dssp EEEEEEE--TTTH---------------HHHHHHHHHHTTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE-
T ss_pred CEEEEEeCCCCCh---------------hHHHHHHHHhcCCCEEEECCCchhH-------HHHHHHHhcC----CEEEEe
Confidence 4899999998642 2245666665779999999999752 5566666554 999999
Q ss_pred cCccc
Q 016427 367 FVIIH 371 (390)
Q Consensus 367 GNHE~ 371 (390)
||||.
T Consensus 55 GNHD~ 59 (156)
T PF12850_consen 55 GNHDN 59 (156)
T ss_dssp -CCHS
T ss_pred CCccc
Confidence 99995
No 23
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=97.57 E-value=0.00017 Score=59.27 Aligned_cols=53 Identities=13% Similarity=0.009 Sum_probs=39.2
Q ss_pred cCCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEEeecCccccccCCC
Q 016427 324 LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIARFVIIHYVAHQL 377 (390)
Q Consensus 324 ~~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymva~GNHE~~~~~~~ 377 (390)
..++|+|++.||+.+... ...+..+..........+|++.++||||+-..|.-
T Consensus 24 ~~~~~~vi~~GD~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~GNHDi~~~H~~ 76 (131)
T cd00838 24 AEKPDFVLVLGDLVGDGP-DPEEVLAAALALLLLLGIPVYVVPGNHDILLTHGP 76 (131)
T ss_pred ccCCCEEEECCcccCCCC-CchHHHHHHHHHhhcCCCCEEEeCCCceEEEeccC
Confidence 378999999999998554 34444444355556789999999999996665543
No 24
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.52 E-value=0.00025 Score=68.47 Aligned_cols=48 Identities=13% Similarity=0.233 Sum_probs=38.1
Q ss_pred CCccEEEEeCcccccc--------CCchhHHHHHHhhhhHhc--cceEEEeecCcccc
Q 016427 325 KNIDIVFHIGDICYAN--------GYISQWDQFTAQIEPIAS--TVPYMIARFVIIHY 372 (390)
Q Consensus 325 ~~~DfVlhiGDisYa~--------G~~~~WD~F~~~iepias--~vPymva~GNHE~~ 372 (390)
.++|+|++.||+.... .+..+|+.|++.+..... ..|++.++||||..
T Consensus 32 ~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~GNHD~~ 89 (256)
T cd07401 32 IKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFDIRGNHDLF 89 (256)
T ss_pred hCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEEeCCCCCcC
Confidence 5799999999998532 135689999998765433 69999999999985
No 25
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=97.47 E-value=0.00039 Score=66.29 Aligned_cols=69 Identities=13% Similarity=0.136 Sum_probs=46.5
Q ss_pred CeEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEE
Q 016427 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (390)
Q Consensus 286 ~~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPym 363 (390)
+-|+++++|.+.. ...++++++.. .++|+|++.||+.+..........+++.+..+ .+|++
T Consensus 4 ~~kIl~iSDiHgn---------------~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l--~~pv~ 66 (224)
T cd07388 4 VRYVLATSNPKGD---------------LEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA--HLPTF 66 (224)
T ss_pred eeEEEEEEecCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCceE
Confidence 4689999999743 23456666543 58999999999997432222233344443322 37999
Q ss_pred EeecCccc
Q 016427 364 IARFVIIH 371 (390)
Q Consensus 364 va~GNHE~ 371 (390)
.++||||.
T Consensus 67 ~V~GNhD~ 74 (224)
T cd07388 67 YVPGPQDA 74 (224)
T ss_pred EEcCCCCh
Confidence 99999996
No 26
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=97.38 E-value=0.00039 Score=61.11 Aligned_cols=60 Identities=17% Similarity=0.287 Sum_probs=43.6
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcCCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEEeec
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIARF 367 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymva~G 367 (390)
|+++++|.+.. ...++++++.+.++|.|+|.||+.+...... +....|+..+.|
T Consensus 1 ~i~~isD~H~~---------------~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~-----------~~~~~~~~~V~G 54 (155)
T cd00841 1 KIGVISDTHGS---------------LELLEKALELFGDVDLIIHAGDVLYPGPLNE-----------LELKAPVIAVRG 54 (155)
T ss_pred CEEEEecCCCC---------------HHHHHHHHHHhcCCCEEEECCccccccccch-----------hhcCCcEEEEeC
Confidence 57899999743 1345667776666999999999986543221 345679999999
Q ss_pred Cccccc
Q 016427 368 VIIHYV 373 (390)
Q Consensus 368 NHE~~~ 373 (390)
|||...
T Consensus 55 NhD~~~ 60 (155)
T cd00841 55 NCDGEV 60 (155)
T ss_pred CCCCcC
Confidence 999754
No 27
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.18 E-value=0.001 Score=59.60 Aligned_cols=55 Identities=13% Similarity=0.201 Sum_probs=39.5
Q ss_pred HHHHHHcCCccEEEEeCccccccC--CchhHHHHHHhhhhHhc---cceEEEeecCccccc
Q 016427 318 RQLIQDLKNIDIVFHIGDICYANG--YISQWDQFTAQIEPIAS---TVPYMIARFVIIHYV 373 (390)
Q Consensus 318 ~~l~~~~~~~DfVlhiGDisYa~G--~~~~WD~F~~~iepias---~vPymva~GNHE~~~ 373 (390)
+++++. .++|+|++.||+..... ....|.+++.++..+.+ .+|++.++||||...
T Consensus 31 ~~~i~~-~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 31 QTSLWL-LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred HHHHHh-cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 344443 57999999999996532 23557777766665543 589999999999865
No 28
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=97.16 E-value=0.00093 Score=60.80 Aligned_cols=59 Identities=14% Similarity=0.229 Sum_probs=42.0
Q ss_pred HHHHHHHHcCCccEEEEeCccccccCC--chhHHHHHHhhhhHhc-------cceEEEeecCccccccC
Q 016427 316 TTRQLIQDLKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIAS-------TVPYMIARFVIIHYVAH 375 (390)
Q Consensus 316 T~~~l~~~~~~~DfVlhiGDisYa~G~--~~~WD~F~~~iepias-------~vPymva~GNHE~~~~~ 375 (390)
+++++++. .++|+|++.|||...... ...|.+..+.++.+.. .+|++.++||||+....
T Consensus 36 ~~~~~i~~-~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~~~ 103 (171)
T cd07384 36 AFKTALQR-LKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGYGE 103 (171)
T ss_pred HHHHHHHh-cCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCCCC
Confidence 44455543 689999999999964322 2457766666655542 68999999999988754
No 29
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.16 E-value=0.0013 Score=62.73 Aligned_cols=77 Identities=12% Similarity=0.155 Sum_probs=51.7
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEE
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymv 364 (390)
++|+.+.|.+..... ..+...+.++++++ .++|+|++.|||+.. |.........+.++-.....|+++
T Consensus 1 ~~i~~isD~H~~~~~---------~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~~~~~~~~~~ 70 (301)
T COG1409 1 MRIAHISDLHLGALG---------VDSEELLEALLAAIEQLKPDLLVVTGDLTND-GEPEEYRRLKELLARLELPAPVIV 70 (301)
T ss_pred CeEEEEecCcccccc---------cchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CCHHHHHHHHHHHhhccCCCceEe
Confidence 478999999876210 01234556665554 478999999999976 655444444444444455678999
Q ss_pred eecCccccc
Q 016427 365 ARFVIIHYV 373 (390)
Q Consensus 365 a~GNHE~~~ 373 (390)
++||||...
T Consensus 71 vpGNHD~~~ 79 (301)
T COG1409 71 VPGNHDARV 79 (301)
T ss_pred eCCCCcCCc
Confidence 999999654
No 30
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.12 E-value=0.0012 Score=63.79 Aligned_cols=83 Identities=11% Similarity=0.087 Sum_probs=49.1
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEEEEeCccccccCC-chhHHHHHHhhhhHhc-c-ce
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGY-ISQWDQFTAQIEPIAS-T-VP 361 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~G~-~~~WD~F~~~iepias-~-vP 361 (390)
+||+.++|++...... .... ...-...++++++.. .++|+|++.||+...... ......|.+.++.+.. . +|
T Consensus 1 mkilh~SD~Hlg~~~~--~~~~-~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~ 77 (253)
T TIGR00619 1 MRILHTSDWHLGKTLE--GVSR-LAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIP 77 (253)
T ss_pred CEEEEEhhhcCCCccC--CCCh-HHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCce
Confidence 4799999998754311 1000 000123445555432 579999999999865432 2222334444444443 3 89
Q ss_pred EEEeecCcccc
Q 016427 362 YMIARFVIIHY 372 (390)
Q Consensus 362 ymva~GNHE~~ 372 (390)
++.+.||||..
T Consensus 78 v~~i~GNHD~~ 88 (253)
T TIGR00619 78 IVVISGNHDSA 88 (253)
T ss_pred EEEEccCCCCh
Confidence 99999999964
No 31
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=97.08 E-value=0.0012 Score=64.09 Aligned_cols=49 Identities=12% Similarity=-0.033 Sum_probs=34.0
Q ss_pred CCccEEEEeCccccccCC---chhHHHHHHhhhhHh----ccceEEEeecCcccccc
Q 016427 325 KNIDIVFHIGDICYANGY---ISQWDQFTAQIEPIA----STVPYMIARFVIIHYVA 374 (390)
Q Consensus 325 ~~~DfVlhiGDisYa~G~---~~~WD~F~~~iepia----s~vPymva~GNHE~~~~ 374 (390)
.++|+|++.|||... |. ..+|.+-++....+. ..+|+++++||||+.+.
T Consensus 44 l~PD~vv~lGDL~d~-G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~ 99 (257)
T cd08163 44 LKPDSTIFLGDLFDG-GRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFG 99 (257)
T ss_pred cCCCEEEEecccccC-CeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCC
Confidence 479999999999753 43 245654344333333 35799999999998654
No 32
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.05 E-value=0.0015 Score=62.05 Aligned_cols=76 Identities=16% Similarity=0.114 Sum_probs=43.3
Q ss_pred EEEecCCCCCC--CCCCcccccccCcHHHHHHHHHH----cCCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEE
Q 016427 290 IIFGDMGKDEA--DGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (390)
Q Consensus 290 ~vfGDmG~~~~--dgs~~~~~~qp~s~~T~~~l~~~----~~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPym 363 (390)
++..|++.... ++-+.+ .....+.++++.+. ++++|+|++.|||++.. ........++.++.+ ..|++
T Consensus 2 ~~~sDlHl~~~~~~~~~~~---g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~-~~~~~~~~l~~l~~l--~~~v~ 75 (232)
T cd07393 2 FAIADLHLNLDPTKPMDVF---GPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAM-KLEEAKLDLAWIDAL--PGTKV 75 (232)
T ss_pred eEEEeeccCCCCCCCCccc---CccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCC-ChHHHHHHHHHHHhC--CCCeE
Confidence 56778876531 111222 22223444555443 25899999999998432 222333334434332 24789
Q ss_pred EeecCccc
Q 016427 364 IARFVIIH 371 (390)
Q Consensus 364 va~GNHE~ 371 (390)
.++||||.
T Consensus 76 ~V~GNHD~ 83 (232)
T cd07393 76 LLKGNHDY 83 (232)
T ss_pred EEeCCccc
Confidence 99999997
No 33
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=96.99 E-value=0.0013 Score=56.73 Aligned_cols=65 Identities=12% Similarity=0.212 Sum_probs=40.7
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcCCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEEeec
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIARF 367 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymva~G 367 (390)
||++++|++.... ++ ...++|+|++.||++.. +....++.+.+.++.+. ..+++.++|
T Consensus 1 ~i~~isD~H~~~~-------------------~~-~~~~~D~vi~~GD~~~~-~~~~~~~~~~~~l~~~~-~~~~~~v~G 58 (135)
T cd07379 1 RFVCISDTHSRHR-------------------TI-SIPDGDVLIHAGDLTER-GTLEELQKFLDWLKSLP-HPHKIVIAG 58 (135)
T ss_pred CEEEEeCCCCCCC-------------------cC-cCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHhCC-CCeEEEEEC
Confidence 4899999985420 11 23679999999999853 33333444444444332 123467999
Q ss_pred Ccccccc
Q 016427 368 VIIHYVA 374 (390)
Q Consensus 368 NHE~~~~ 374 (390)
|||....
T Consensus 59 NHD~~~~ 65 (135)
T cd07379 59 NHDLTLD 65 (135)
T ss_pred CCCCcCC
Confidence 9997654
No 34
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=96.94 E-value=0.0022 Score=56.91 Aligned_cols=64 Identities=16% Similarity=0.175 Sum_probs=41.1
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcCCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEEee
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAR 366 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymva~ 366 (390)
.|+++++|++.... .++.+.++++..+++|.|+|.||+.- ...++.++.+ ..|+..+.
T Consensus 1 m~i~viSD~H~~~~------------~~~~~~~~~~~~~~~d~ii~~GD~~~--------~~~~~~l~~~--~~~~~~V~ 58 (158)
T TIGR00040 1 MKILVISDTHGPLR------------ATELPVELFNLESNVDLVIHAGDLTS--------PFVLKEFEDL--AAKVIAVR 58 (158)
T ss_pred CEEEEEecccCCcc------------hhHhHHHHHhhccCCCEEEEcCCCCC--------HHHHHHHHHh--CCceEEEc
Confidence 37999999985321 12333455554448999999999971 1222333222 35799999
Q ss_pred cCcccc
Q 016427 367 FVIIHY 372 (390)
Q Consensus 367 GNHE~~ 372 (390)
||||.+
T Consensus 59 GN~D~~ 64 (158)
T TIGR00040 59 GNNDGE 64 (158)
T ss_pred cCCCch
Confidence 999965
No 35
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=96.91 E-value=0.0025 Score=57.01 Aligned_cols=44 Identities=18% Similarity=-0.041 Sum_probs=29.3
Q ss_pred CCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEEeecCcccc
Q 016427 325 KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIARFVIIHY 372 (390)
Q Consensus 325 ~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymva~GNHE~~ 372 (390)
.++|+|++.||++... ....-. +++.++ ...+|++.++||||..
T Consensus 22 ~~~D~vv~~GDl~~~~-~~~~~~-~~~~l~--~~~~p~~~v~GNHD~~ 65 (188)
T cd07392 22 EEADAVIVAGDITNFG-GKEAAV-EINLLL--AIGVPVLAVPGNCDTP 65 (188)
T ss_pred cCCCEEEECCCccCcC-CHHHHH-HHHHHH--hcCCCEEEEcCCCCCH
Confidence 6899999999999643 221111 222222 2368999999999953
No 36
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=96.88 E-value=0.0031 Score=59.85 Aligned_cols=72 Identities=15% Similarity=0.146 Sum_probs=46.0
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEEe
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymva 365 (390)
||+.+.|++.... .+ ...+.++++++.+ .++|+|++.|||+... .+-.++++.+..+ ..+|++.+
T Consensus 1 ki~~iSDlH~~~~----~~-----~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~---~~~~~~~~~l~~~-~~~pv~~v 67 (239)
T TIGR03729 1 KIAFSSDLHIDLN----HF-----DTEEMLETLAQYLKKQKIDHLHIAGDISNDF---QRSLPFIEKLQEL-KGIKVTFN 67 (239)
T ss_pred CEEEEEeecCCCC----CC-----CHHHHHHHHHHHHHhcCCCEEEECCccccch---hhHHHHHHHHHHh-cCCcEEEE
Confidence 5889999986311 11 0122344554433 5799999999999531 2234555555443 46899999
Q ss_pred ecCcccc
Q 016427 366 RFVIIHY 372 (390)
Q Consensus 366 ~GNHE~~ 372 (390)
+||||..
T Consensus 68 ~GNHD~~ 74 (239)
T TIGR03729 68 AGNHDML 74 (239)
T ss_pred CCCCCCC
Confidence 9999974
No 37
>PRK09453 phosphodiesterase; Provisional
Probab=96.83 E-value=0.0038 Score=56.79 Aligned_cols=69 Identities=13% Similarity=0.125 Sum_probs=42.6
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEEEEeCccccccCCc-----hhHHHHHHhhhhHhccc
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYI-----SQWDQFTAQIEPIASTV 360 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~G~~-----~~WD~F~~~iepias~v 360 (390)
|+++++|.+... ..++++++.+ .++|.|+|.||+.....+. ...++..+.++.. ..
T Consensus 2 ri~viSD~Hg~~---------------~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 64 (182)
T PRK09453 2 KLMFASDTHGSL---------------PATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--AD 64 (182)
T ss_pred eEEEEEeccCCH---------------HHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CC
Confidence 789999998421 1123444433 6799999999998532211 1123334433322 25
Q ss_pred eEEEeecCccccc
Q 016427 361 PYMIARFVIIHYV 373 (390)
Q Consensus 361 Pymva~GNHE~~~ 373 (390)
|+..+.||||.+.
T Consensus 65 ~v~~V~GNhD~~~ 77 (182)
T PRK09453 65 KIIAVRGNCDSEV 77 (182)
T ss_pred ceEEEccCCcchh
Confidence 8999999999654
No 38
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=96.80 E-value=0.0045 Score=58.95 Aligned_cols=76 Identities=14% Similarity=0.180 Sum_probs=47.1
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHH-HHHHHHHHcCCccEEEEeCccccc-cCC---chhHHHHHHhhhhHhcc-ce
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLN-TTRQLIQDLKNIDIVFHIGDICYA-NGY---ISQWDQFTAQIEPIAST-VP 361 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~-T~~~l~~~~~~~DfVlhiGDisYa-~G~---~~~WD~F~~~iepias~-vP 361 (390)
|+++++|++.... .+...+ .++.+.....++|+|++.||+... .|. ........+.++.+... +|
T Consensus 2 ~i~~iSDlHl~~~---------~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~ 72 (241)
T PRK05340 2 PTLFISDLHLSPE---------RPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVP 72 (241)
T ss_pred cEEEEeecCCCCC---------ChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCe
Confidence 6899999987532 111111 122222223579999999999853 111 22234455566666655 89
Q ss_pred EEEeecCcccc
Q 016427 362 YMIARFVIIHY 372 (390)
Q Consensus 362 ymva~GNHE~~ 372 (390)
++.+.||||..
T Consensus 73 v~~v~GNHD~~ 83 (241)
T PRK05340 73 CYFMHGNRDFL 83 (241)
T ss_pred EEEEeCCCchh
Confidence 99999999964
No 39
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=96.76 E-value=0.0031 Score=48.68 Aligned_cols=74 Identities=18% Similarity=0.221 Sum_probs=44.7
Q ss_pred CCcccEeeeCCCCCeEEEEEEeCCC--CCCCccEEEEeecCCCCccccccceEEeccccCCCCCccccccCCceEEEEEe
Q 016427 168 APVYPRLAQGKVWNEMTVTWTSGYG--INEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (390)
Q Consensus 168 ~P~qvhLa~~~d~~~m~VtW~T~~~--~~~~~~~V~yG~~~~~~~~~~a~t~Ty~~~~mcg~PA~t~g~rdpg~iH~a~L 245 (390)
+|..+++.-.. .+++.|+|..... .....-.|+|....+.... ...+. ++-.++++|
T Consensus 2 ~P~~l~v~~~~-~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~i 60 (85)
T PF00041_consen 2 APENLSVSNIS-PTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSDW---QEVTV-----------------PGNETSYTI 60 (85)
T ss_dssp SSEEEEEEEEC-SSEEEEEEEESSSTSSSESEEEEEEEETTSSSEE---EEEEE-----------------ETTSSEEEE
T ss_pred cCcCeEEEECC-CCEEEEEEECCCCCCCCeeEEEEEEEecccceee---eeeee-----------------eeeeeeeee
Confidence 56667666643 5899999998841 1112335566544333200 00111 112236889
Q ss_pred CCCCCCCEEEEEEceec
Q 016427 246 RELWPNAMYTYKLGHRL 262 (390)
Q Consensus 246 tgL~PgT~Y~YrVG~~~ 262 (390)
+||+|+|+|.+||....
T Consensus 61 ~~L~p~t~Y~~~v~a~~ 77 (85)
T PF00041_consen 61 TGLQPGTTYEFRVRAVN 77 (85)
T ss_dssp ESCCTTSEEEEEEEEEE
T ss_pred ccCCCCCEEEEEEEEEe
Confidence 99999999999999764
No 40
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=96.74 E-value=0.0014 Score=58.47 Aligned_cols=44 Identities=18% Similarity=0.257 Sum_probs=31.5
Q ss_pred CCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEEeecCcccc
Q 016427 325 KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIARFVIIHY 372 (390)
Q Consensus 325 ~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymva~GNHE~~ 372 (390)
.++|+|++.|||++... ...|.. ..+-.....|++.++||||..
T Consensus 25 ~~~d~li~~GDi~~~~~-~~~~~~---~~~~~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 25 PDADILVLAGDIGYLTD-APRFAP---LLLALKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CCCCEEEECCCCCCCcc-hHHHHH---HHHhhcCCccEEEeCCCcceE
Confidence 68999999999996432 222322 333345678999999999975
No 41
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=96.60 E-value=0.0048 Score=59.39 Aligned_cols=65 Identities=17% Similarity=0.228 Sum_probs=40.9
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcCCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEEee
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAR 366 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymva~ 366 (390)
+|++++||++.... ....+ +++. .++|+|++.||++... .++++.++.+ ..|.+.+.
T Consensus 1 ~rIa~isDiHg~~~-------------~~~~~-~l~~-~~pD~Vl~~GDi~~~~------~~~~~~l~~l--~~p~~~V~ 57 (238)
T cd07397 1 LRIAIVGDVHGQWD-------------LEDIK-ALHL-LQPDLVLFVGDFGNES------VQLVRAISSL--PLPKAVIL 57 (238)
T ss_pred CEEEEEecCCCCch-------------HHHHH-HHhc-cCCCEEEECCCCCcCh------HHHHHHHHhC--CCCeEEEc
Confidence 58999999985311 01112 3332 4789999999998421 1233333222 36899999
Q ss_pred cCcccccc
Q 016427 367 FVIIHYVA 374 (390)
Q Consensus 367 GNHE~~~~ 374 (390)
||||....
T Consensus 58 GNHD~~~~ 65 (238)
T cd07397 58 GNHDAWYD 65 (238)
T ss_pred CCCccccc
Confidence 99998664
No 42
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.57 E-value=0.006 Score=57.07 Aligned_cols=50 Identities=12% Similarity=0.016 Sum_probs=36.7
Q ss_pred CCccEEEEeCccccccCC--chhHHHHHHhhhhHh---ccceEEEeecCcccccc
Q 016427 325 KNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA---STVPYMIARFVIIHYVA 374 (390)
Q Consensus 325 ~~~DfVlhiGDisYa~G~--~~~WD~F~~~iepia---s~vPymva~GNHE~~~~ 374 (390)
-++|+|+..|||...... ..+|.+.++....+. ..+|++.++||||+.+.
T Consensus 41 l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~ 95 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGE 95 (195)
T ss_pred cCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCC
Confidence 479999999999976543 334555555555543 35899999999998864
No 43
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=96.56 E-value=0.006 Score=63.07 Aligned_cols=81 Identities=9% Similarity=0.069 Sum_probs=45.7
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHH--cCCccEEEEeCccccccCCc----hhHHHHHHhhhhHhccc
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYI----SQWDQFTAQIEPIASTV 360 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~--~~~~DfVlhiGDisYa~G~~----~~WD~F~~~iepias~v 360 (390)
+||+.++|++.+..- ....... .-...++++++. ..++|+|++.|||....... ...+.|+..+.. ..+
T Consensus 1 mkilh~SDlHlG~~~--~~~~~~~-~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~--~~~ 75 (407)
T PRK10966 1 MRILHTSDWHLGQNF--YSKSRAA-EHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ--TGC 75 (407)
T ss_pred CEEEEEcccCCCCcc--cCcccHH-HHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHh--cCC
Confidence 489999999875321 0000000 001223444443 26899999999997432211 112344444332 258
Q ss_pred eEEEeecCcccc
Q 016427 361 PYMIARFVIIHY 372 (390)
Q Consensus 361 Pymva~GNHE~~ 372 (390)
|+++++||||..
T Consensus 76 ~v~~I~GNHD~~ 87 (407)
T PRK10966 76 QLVVLAGNHDSV 87 (407)
T ss_pred cEEEEcCCCCCh
Confidence 999999999953
No 44
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=96.51 E-value=0.0079 Score=56.98 Aligned_cols=75 Identities=12% Similarity=0.135 Sum_probs=45.2
Q ss_pred EEEecCCCCCCCCCCcccccccCc-HHHHHHHHHHcCCccEEEEeCccccc----cCCchhHHHHHHhhhhHhc-cceEE
Q 016427 290 IIFGDMGKDEADGSNEYNNFQRGS-LNTTRQLIQDLKNIDIVFHIGDICYA----NGYISQWDQFTAQIEPIAS-TVPYM 363 (390)
Q Consensus 290 ~vfGDmG~~~~dgs~~~~~~qp~s-~~T~~~l~~~~~~~DfVlhiGDisYa----~G~~~~WD~F~~~iepias-~vPym 363 (390)
++++|++..... +.. ...++.+.+...++|+|++.||+... +.......++.+.++.+.. .+|++
T Consensus 2 ~~iSDlHl~~~~---------~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~ 72 (231)
T TIGR01854 2 LFISDLHLSPER---------PDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCY 72 (231)
T ss_pred eEEEecCCCCCC---------hhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEE
Confidence 578999865321 101 11233333333479999999999852 1112223445555666655 48999
Q ss_pred EeecCccccc
Q 016427 364 IARFVIIHYV 373 (390)
Q Consensus 364 va~GNHE~~~ 373 (390)
.++||||...
T Consensus 73 ~v~GNHD~~~ 82 (231)
T TIGR01854 73 FMHGNRDFLI 82 (231)
T ss_pred EEcCCCchhh
Confidence 9999999653
No 45
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.46 E-value=0.005 Score=62.70 Aligned_cols=86 Identities=12% Similarity=0.120 Sum_probs=50.0
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEEEEeCccccccCC-chhHHHHHHhhhhHh-ccceE
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGY-ISQWDQFTAQIEPIA-STVPY 362 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~G~-~~~WD~F~~~iepia-s~vPy 362 (390)
.||+...|.+.+... .+...+. .....++.++++.. .++|||+|+||+=..+.- ...=..|.+.++.+- ..+|+
T Consensus 1 mkilHtSD~HLG~~~-~~~~~r~-~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv 78 (390)
T COG0420 1 MKILHTSDWHLGSKQ-LNLPSRL-EDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPV 78 (390)
T ss_pred CeeEEecccccchhh-ccCccch-HHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcE
Confidence 479999999886211 1111010 11233445555442 688999999999644211 111233444444432 68999
Q ss_pred EEeecCcccccc
Q 016427 363 MIARFVIIHYVA 374 (390)
Q Consensus 363 mva~GNHE~~~~ 374 (390)
+++.||||.-..
T Consensus 79 ~~I~GNHD~~~~ 90 (390)
T COG0420 79 VVIAGNHDSPSR 90 (390)
T ss_pred EEecCCCCchhc
Confidence 999999996543
No 46
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=96.46 E-value=0.0086 Score=55.73 Aligned_cols=63 Identities=10% Similarity=0.056 Sum_probs=42.0
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc---CCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEE
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~---~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymv 364 (390)
|++++||.+.. ...++++++.. ++.|.+++.||+++..... .+.++.+. ..++..
T Consensus 2 ri~~isDiHg~---------------~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~---~~~~~~l~----~~~~~~ 59 (207)
T cd07424 2 RDFVVGDIHGH---------------YSLLQKALDAVGFDPARDRLISVGDLIDRGPES---LACLELLL----EPWFHA 59 (207)
T ss_pred CEEEEECCCCC---------------HHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCH---HHHHHHHh----cCCEEE
Confidence 58999999742 24456777654 3689999999999643332 23333332 246788
Q ss_pred eecCcccc
Q 016427 365 ARFVIIHY 372 (390)
Q Consensus 365 a~GNHE~~ 372 (390)
+.||||..
T Consensus 60 v~GNhe~~ 67 (207)
T cd07424 60 VRGNHEQM 67 (207)
T ss_pred eECCChHH
Confidence 99999954
No 47
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=96.34 E-value=0.011 Score=58.09 Aligned_cols=65 Identities=12% Similarity=0.112 Sum_probs=43.1
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc---CCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEE
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~---~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymv 364 (390)
+++++||.+.. ...++++++++ ++.|.+++.||++.- |-.+ .+-++.+..+ ..+..+
T Consensus 2 ~~~vIGDIHG~---------------~~~l~~ll~~~~~~~~~D~li~lGDlVdr-Gp~s--~~vl~~l~~l--~~~~~~ 61 (275)
T PRK00166 2 ATYAIGDIQGC---------------YDELQRLLEKIDFDPAKDTLWLVGDLVNR-GPDS--LEVLRFVKSL--GDSAVT 61 (275)
T ss_pred cEEEEEccCCC---------------HHHHHHHHHhcCCCCCCCEEEEeCCccCC-CcCH--HHHHHHHHhc--CCCeEE
Confidence 57899999743 34567777765 468999999999953 4322 2222333222 235778
Q ss_pred eecCcccc
Q 016427 365 ARFVIIHY 372 (390)
Q Consensus 365 a~GNHE~~ 372 (390)
+.||||..
T Consensus 62 VlGNHD~~ 69 (275)
T PRK00166 62 VLGNHDLH 69 (275)
T ss_pred EecChhHH
Confidence 99999964
No 48
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=96.34 E-value=0.012 Score=55.90 Aligned_cols=67 Identities=15% Similarity=0.110 Sum_probs=42.7
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc----C--------CccEEEEeCccccccCCchhHHHHHHhhhh
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL----K--------NIDIVFHIGDICYANGYISQWDQFTAQIEP 355 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~----~--------~~DfVlhiGDisYa~G~~~~WD~F~~~iep 355 (390)
|++++||.+.. ...++++++++ . +.|-+++.||+... |-.+ .+-++.+..
T Consensus 2 ~i~vigDIHG~---------------~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDr-G~~s--~evl~~l~~ 63 (234)
T cd07423 2 PFDIIGDVHGC---------------YDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDR-GPDS--PEVLRLVMS 63 (234)
T ss_pred CeEEEEECCCC---------------HHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCC-CCCH--HHHHHHHHH
Confidence 58999999753 34567777765 1 25899999999953 4322 222333333
Q ss_pred HhccceEEEeecCcccc
Q 016427 356 IASTVPYMIARFVIIHY 372 (390)
Q Consensus 356 ias~vPymva~GNHE~~ 372 (390)
+...-....+.||||..
T Consensus 64 l~~~~~~~~v~GNHE~~ 80 (234)
T cd07423 64 MVAAGAALCVPGNHDNK 80 (234)
T ss_pred HhhCCcEEEEECCcHHH
Confidence 32233567899999963
No 49
>PHA02546 47 endonuclease subunit; Provisional
Probab=96.24 E-value=0.012 Score=59.32 Aligned_cols=84 Identities=14% Similarity=0.194 Sum_probs=48.8
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEEEEeCcccccc-CCchhHHHHHHh--hhhHh-ccc
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYAN-GYISQWDQFTAQ--IEPIA-STV 360 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~-G~~~~WD~F~~~--iepia-s~v 360 (390)
.||+.++|.+.+.... +.+ ....-...++++++.. .++|+|++.||+-... .....--.|... .+.+. +.+
T Consensus 1 MKilhiSD~HLG~~~~-~~~--~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi 77 (340)
T PHA02546 1 MKILLIGDQHLGVRKD-DPW--FQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGI 77 (340)
T ss_pred CeEEEEeeecCCCcCC-Chh--hHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCC
Confidence 4799999998764311 111 0111123455554432 6899999999997442 222111134433 33332 369
Q ss_pred eEEEeecCccccc
Q 016427 361 PYMIARFVIIHYV 373 (390)
Q Consensus 361 Pymva~GNHE~~~ 373 (390)
|++..+||||...
T Consensus 78 ~v~~I~GNHD~~~ 90 (340)
T PHA02546 78 TLHVLVGNHDMYY 90 (340)
T ss_pred eEEEEccCCCccc
Confidence 9999999999753
No 50
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=96.18 E-value=0.018 Score=59.58 Aligned_cols=85 Identities=15% Similarity=0.102 Sum_probs=52.1
Q ss_pred CeEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEEEEeCccccccCC-chhHHHHHHhhhh-------
Q 016427 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGY-ISQWDQFTAQIEP------- 355 (390)
Q Consensus 286 ~~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~G~-~~~WD~F~~~iep------- 355 (390)
.+||+.++|.+.+... +.. .....+..+++++++.. .++|+|++.|||-..+.- ...-.++++.+..
T Consensus 3 ~mKIlh~SD~HlG~~~--~~~-~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p 79 (405)
T TIGR00583 3 TIRILVSTDNHVGYGE--NDP-VRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKP 79 (405)
T ss_pred ceEEEEEcCCCCCCcc--CCc-hhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCc
Confidence 4899999999875321 000 01112345666666543 689999999999865421 2223334444332
Q ss_pred ---------------------------HhccceEEEeecCccccc
Q 016427 356 ---------------------------IASTVPYMIARFVIIHYV 373 (390)
Q Consensus 356 ---------------------------ias~vPymva~GNHE~~~ 373 (390)
+...+|++...||||.-.
T Consensus 80 ~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 80 CELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred cchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 113799999999999643
No 51
>PHA02239 putative protein phosphatase
Probab=96.15 E-value=0.018 Score=55.23 Aligned_cols=66 Identities=9% Similarity=0.067 Sum_probs=41.4
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc----CCccEEEEeCccccccCCch--hHHHHHHhhhhHhccce
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL----KNIDIVFHIGDICYANGYIS--QWDQFTAQIEPIASTVP 361 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~----~~~DfVlhiGDisYa~G~~~--~WD~F~~~iepias~vP 361 (390)
+++++||.+.. ...++++++.+ ...|.++..||++. +|..+ ..+.+++. +....+
T Consensus 2 ~~~~IsDIHG~---------------~~~l~~ll~~i~~~~~~~d~li~lGD~iD-rG~~s~~v~~~l~~~---~~~~~~ 62 (235)
T PHA02239 2 AIYVVPDIHGE---------------YQKLLTIMDKINNERKPEETIVFLGDYVD-RGKRSKDVVNYIFDL---MSNDDN 62 (235)
T ss_pred eEEEEECCCCC---------------HHHHHHHHHHHhhcCCCCCEEEEecCcCC-CCCChHHHHHHHHHH---hhcCCC
Confidence 68999999843 13345555543 23689999999995 44433 22222222 223457
Q ss_pred EEEeecCcccc
Q 016427 362 YMIARFVIIHY 372 (390)
Q Consensus 362 ymva~GNHE~~ 372 (390)
.+...||||..
T Consensus 63 ~~~l~GNHE~~ 73 (235)
T PHA02239 63 VVTLLGNHDDE 73 (235)
T ss_pred eEEEECCcHHH
Confidence 88899999964
No 52
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=96.09 E-value=0.0087 Score=53.93 Aligned_cols=51 Identities=12% Similarity=0.141 Sum_probs=32.5
Q ss_pred HHHHHHcCCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEEeecCcccccc
Q 016427 318 RQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIARFVIIHYVA 374 (390)
Q Consensus 318 ~~l~~~~~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymva~GNHE~~~~ 374 (390)
+.+.+.++++|.|+|.||++.... ...+-+++.++ ..|++.+.||||....
T Consensus 34 ~~~~~~~~~~d~vi~~GDl~~~~~-~~~~~~~l~~~-----~~~~~~v~GNHD~~~~ 84 (168)
T cd07390 34 RNWNETVGPDDTVYHLGDFSFGGK-AGTELELLSRL-----NGRKHLIKGNHDSSLE 84 (168)
T ss_pred HHHhhhcCCCCEEEEeCCCCCCCC-hHHHHHHHHhC-----CCCeEEEeCCCCchhh
Confidence 333443567899999999996433 22222233322 3589999999996544
No 53
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=96.08 E-value=0.016 Score=53.10 Aligned_cols=65 Identities=18% Similarity=0.278 Sum_probs=39.5
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcCCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEEeec
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIARF 367 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymva~G 367 (390)
++++++|++....... -...+.++++. .++|.|+|.||+++ ...++. ++.+ ..|+..+.|
T Consensus 1 ~i~viSDtHl~~~~~~---------~~~~~~~~~~~-~~~d~iih~GDi~~----~~~~~~----l~~~--~~~~~~V~G 60 (178)
T cd07394 1 LVLVIGDLHIPHRASD---------LPAKFKKLLVP-GKIQHVLCTGNLCS----KETYDY----LKTI--APDVHIVRG 60 (178)
T ss_pred CEEEEEecCCCCCchh---------hHHHHHHHhcc-CCCCEEEECCCCCC----HHHHHH----HHhh--CCceEEEEC
Confidence 4789999985432100 01123444433 57999999999975 222332 2222 247899999
Q ss_pred Ccccc
Q 016427 368 VIIHY 372 (390)
Q Consensus 368 NHE~~ 372 (390)
|||..
T Consensus 61 N~D~~ 65 (178)
T cd07394 61 DFDEN 65 (178)
T ss_pred CCCcc
Confidence 99965
No 54
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=96.08 E-value=0.019 Score=55.15 Aligned_cols=67 Identities=13% Similarity=0.072 Sum_probs=42.7
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcC-----------CccEEEEeCccccccCCchhHHHHHHhhhhH
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK-----------NIDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~-----------~~DfVlhiGDisYa~G~~~~WD~F~~~iepi 356 (390)
|+.++||.+-. ...+.+|++.++ .-|-+++.||++. +|-.+ -+-++.+..+
T Consensus 2 ~~~vIGDIHG~---------------~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliD-RGp~S--~~vl~~~~~~ 63 (245)
T PRK13625 2 KYDIIGDIHGC---------------YQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTD-RGPHS--LRMIEIVWEL 63 (245)
T ss_pred ceEEEEECccC---------------HHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccC-CCcCh--HHHHHHHHHH
Confidence 68999999743 355677777632 3478999999995 44332 1222222222
Q ss_pred hccceEEEeecCcccc
Q 016427 357 ASTVPYMIARFVIIHY 372 (390)
Q Consensus 357 as~vPymva~GNHE~~ 372 (390)
...-.+....||||..
T Consensus 64 ~~~~~~~~l~GNHE~~ 79 (245)
T PRK13625 64 VEKKAAYYVPGNHCNK 79 (245)
T ss_pred hhCCCEEEEeCccHHH
Confidence 2345788999999953
No 55
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=96.06 E-value=0.011 Score=56.45 Aligned_cols=85 Identities=11% Similarity=0.003 Sum_probs=50.3
Q ss_pred eEEEEEecCCCCCCCCCCccccccc--CcHHHHHHHHHHc--CCccEEEEeCccccccCCchhHHHHHHhhhhHhccceE
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQR--GSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp--~s~~T~~~l~~~~--~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPy 362 (390)
-+.++++|.+..............| ...++++++.+.. .++|.|++.||+..+......|..+.+.++.+ ..++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~--~~~v 92 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT--FRDL 92 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc--CCcE
Confidence 3578999998753110000000111 1124566666633 46999999999997654424454444444432 2599
Q ss_pred EEeecCccccc
Q 016427 363 MIARFVIIHYV 373 (390)
Q Consensus 363 mva~GNHE~~~ 373 (390)
+.+.||||...
T Consensus 93 ~~V~GNHD~~~ 103 (225)
T TIGR00024 93 ILIRGNHDALI 103 (225)
T ss_pred EEECCCCCCcc
Confidence 99999999654
No 56
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=96.05 E-value=0.023 Score=58.53 Aligned_cols=85 Identities=9% Similarity=0.016 Sum_probs=57.3
Q ss_pred CCCeEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHH------------cCCccEEEEeCccccccC--CchhHHHH
Q 016427 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD------------LKNIDIVFHIGDICYANG--YISQWDQF 349 (390)
Q Consensus 284 ~~~~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~------------~~~~DfVlhiGDisYa~G--~~~~WD~F 349 (390)
+..+|+++++|.|.-+.-.... ....+++..+| .-+||.+++.|||-...- -..+|.+.
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~-------~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~ 118 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKF-------LVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKR 118 (410)
T ss_pred CCceEEEEecCchhcCCCCCcc-------ccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHH
Confidence 3469999999998765211111 12233443333 258999999999985322 25678877
Q ss_pred HHhhhhHh---ccceEEEeecCccccccC
Q 016427 350 TAQIEPIA---STVPYMIARFVIIHYVAH 375 (390)
Q Consensus 350 ~~~iepia---s~vPymva~GNHE~~~~~ 375 (390)
.+-+..+. .++|.+..+||||+.+..
T Consensus 119 ~~RfkkIf~~k~~~~~~~i~GNhDIGf~~ 147 (410)
T KOG3662|consen 119 YERFKKIFGRKGNIKVIYIAGNHDIGFGN 147 (410)
T ss_pred HHHHHHhhCCCCCCeeEEeCCcccccccc
Confidence 76666555 469999999999988764
No 57
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=96.01 E-value=0.021 Score=53.50 Aligned_cols=69 Identities=13% Similarity=0.049 Sum_probs=42.4
Q ss_pred EEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc----------CCccEEEEeCccccccCCch-hHHHHHHhh-hhHh
Q 016427 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL----------KNIDIVFHIGDICYANGYIS-QWDQFTAQI-EPIA 357 (390)
Q Consensus 290 ~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~----------~~~DfVlhiGDisYa~G~~~-~WD~F~~~i-epia 357 (390)
+++||++.. ...+.+++++. ...|.+++.||+........ ..+..++.. +...
T Consensus 1 ~vi~DIHG~---------------~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~ 65 (208)
T cd07425 1 VAIGDLHGD---------------LDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAK 65 (208)
T ss_pred CEEeCccCC---------------HHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHh
Confidence 478998743 35667777764 25789999999995332221 222222211 1122
Q ss_pred ccceEEEeecCccccc
Q 016427 358 STVPYMIARFVIIHYV 373 (390)
Q Consensus 358 s~vPymva~GNHE~~~ 373 (390)
...+++++.||||...
T Consensus 66 ~~~~v~~l~GNHE~~~ 81 (208)
T cd07425 66 AGGKVHFLLGNHELMN 81 (208)
T ss_pred cCCeEEEeeCCCcHHH
Confidence 3468999999999553
No 58
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=95.83 E-value=0.028 Score=53.24 Aligned_cols=66 Identities=12% Similarity=0.072 Sum_probs=41.0
Q ss_pred EEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcC----------CccEEEEeCccccccCCchhHHHHHHhhhhHhc
Q 016427 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK----------NIDIVFHIGDICYANGYISQWDQFTAQIEPIAS 358 (390)
Q Consensus 289 f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~----------~~DfVlhiGDisYa~G~~~~WD~F~~~iepias 358 (390)
+.++||.+-. ...++++++++. ..|.+++.||++. .|-.+ .+-++.+..+..
T Consensus 1 ~~vIGDIHG~---------------~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~ID-RGp~S--~~vl~~l~~l~~ 62 (222)
T cd07413 1 YDFIGDIHGH---------------AEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLID-RGPEI--RELLEIVKSMVD 62 (222)
T ss_pred CEEEEeccCC---------------HHHHHHHHHHcCCCccccccCCCCCEEEEeCcccC-CCCCH--HHHHHHHHHhhc
Confidence 3689999753 356777777641 3579999999994 44322 222222222222
Q ss_pred cceEEEeecCcccc
Q 016427 359 TVPYMIARFVIIHY 372 (390)
Q Consensus 359 ~vPymva~GNHE~~ 372 (390)
.-....+.||||..
T Consensus 63 ~~~~~~l~GNHE~~ 76 (222)
T cd07413 63 AGHALAVMGNHEFN 76 (222)
T ss_pred CCCEEEEEccCcHH
Confidence 33577789999964
No 59
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=95.83 E-value=0.025 Score=53.45 Aligned_cols=63 Identities=10% Similarity=0.116 Sum_probs=40.9
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc---CCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEE
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~---~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPym 363 (390)
-|++++||.+.. ...++++++++ ++.|.+++.||++.......+.=+++. .-...
T Consensus 15 ~ri~visDiHg~---------------~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~-------~~~~~ 72 (218)
T PRK09968 15 RHIWVVGDIHGE---------------YQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLN-------QPWFI 72 (218)
T ss_pred CeEEEEEeccCC---------------HHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHh-------hCCcE
Confidence 389999999743 24456676665 368999999999964323221111221 12456
Q ss_pred EeecCccc
Q 016427 364 IARFVIIH 371 (390)
Q Consensus 364 va~GNHE~ 371 (390)
.+.||||.
T Consensus 73 ~v~GNHE~ 80 (218)
T PRK09968 73 SVKGNHEA 80 (218)
T ss_pred EEECchHH
Confidence 89999996
No 60
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=95.79 E-value=0.023 Score=51.34 Aligned_cols=60 Identities=15% Similarity=0.131 Sum_probs=38.4
Q ss_pred HHHHHHHHHc--CCccEEEEeCccccccCC-ch-hHHHHHHhhhhHhccceEEEeecCccccccC
Q 016427 315 NTTRQLIQDL--KNIDIVFHIGDICYANGY-IS-QWDQFTAQIEPIASTVPYMIARFVIIHYVAH 375 (390)
Q Consensus 315 ~T~~~l~~~~--~~~DfVlhiGDisYa~G~-~~-~WD~F~~~iepias~vPymva~GNHE~~~~~ 375 (390)
.+++++.+.+ .++|.|++.||+.+.... .. .+... ...+.....+|++.+.||||.....
T Consensus 28 ~~~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~i~GNHD~~~~~ 91 (172)
T cd07391 28 DTLERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEV-AFLRLLAKDVDVILIRGNHDGGLPE 91 (172)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHH-HHHHhccCCCeEEEEcccCccchhh
Confidence 3445544433 579999999999975432 21 22221 1233445678999999999976653
No 61
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=95.71 E-value=0.025 Score=53.30 Aligned_cols=61 Identities=10% Similarity=0.066 Sum_probs=40.4
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcC---CccEEEEeCccccccCCc-hhHHHHHHhhhhHhccceEE
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK---NIDIVFHIGDICYANGYI-SQWDQFTAQIEPIASTVPYM 363 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~---~~DfVlhiGDisYa~G~~-~~WD~F~~~iepias~vPym 363 (390)
|++++||.+.. ...++++++++. +.|-+++.||++...... ...+... .....
T Consensus 18 ri~vigDIHG~---------------~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~--------~~~~~ 74 (218)
T PRK11439 18 HIWLVGDIHGC---------------FEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLE--------EHWVR 74 (218)
T ss_pred eEEEEEcccCC---------------HHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHH--------cCCce
Confidence 89999999753 355677777753 578999999999543232 2222211 12356
Q ss_pred EeecCccc
Q 016427 364 IARFVIIH 371 (390)
Q Consensus 364 va~GNHE~ 371 (390)
.+.||||.
T Consensus 75 ~v~GNHE~ 82 (218)
T PRK11439 75 AVRGNHEQ 82 (218)
T ss_pred EeeCchHH
Confidence 78999994
No 62
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=95.61 E-value=0.19 Score=57.60 Aligned_cols=134 Identities=13% Similarity=0.130 Sum_probs=77.8
Q ss_pred eceEEEEEEeecc--cceEEEEEecCC-----CCceEEEeecceecC-CCCCCcc-cEeeeCCCCCeEEEEEEeCCCCCC
Q 016427 125 GKGSLKLQLINQR--SDFSFVLFTNGL-----LNPKVVAVSNKVTFT-NPNAPVY-PRLAQGKVWNEMTVTWTSGYGINE 195 (390)
Q Consensus 125 G~gsl~~~L~n~R--~~~~f~~f~~~~-----~~p~l~a~S~~v~f~-~~~~P~q-vhLa~~~d~~~m~VtW~T~~~~~~ 195 (390)
=+.....+|-+++ .+|.|++-.-+. .++. +. .+++. -|.+|-| +.|-..+ .++++|.|........
T Consensus 570 ~~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~-i~---V~Tlsd~PsaPP~Nl~lev~s-StsVrVsW~pP~~~t~ 644 (1381)
T KOG4221|consen 570 ENNATEYTINGLEKYTEYSIRVVAYNSAGSGVSSAD-IT---VRTLSDVPSAPPQNLSLEVVS-STSVRVSWLPPPSETQ 644 (1381)
T ss_pred ecCccEEEeecCCCccceEEEEEEecCCCCCCCCCc-eE---EEeccCCCCCCCcceEEEecC-CCeEEEEccCCCcccc
Confidence 4556677777888 478887755322 1211 11 12222 3455544 8877776 5999999998764322
Q ss_pred CccEEEEeecCCCCccccccceEEeccccCCCCCccccccCCceEEEEEeCCCCCCCEEEEEEceecCCCCccccceEEE
Q 016427 196 AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQF 275 (390)
Q Consensus 196 ~~~~V~yG~~~~~~~~~~a~t~Ty~~~~mcg~PA~t~g~rdpg~iH~a~LtgL~PgT~Y~YrVG~~~~dg~~~wS~~~sF 275 (390)
.....-|...............++.. |.-..-.+.+|+|+|.|.+||.....+|++..|++.+|
T Consensus 645 ng~itgYkIRy~~~~~~~~~~~t~v~----------------~n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~a 708 (1381)
T KOG4221|consen 645 NGQITGYKIRYRKLSREDEVNETVVK----------------GNTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWVSA 708 (1381)
T ss_pred cceEEEEEEEecccCcccccceeecc----------------cchhhhHhhcCCCCceEEEEEEEeccCCCCCcccceec
Confidence 22333343322111111111112211 11112245789999999999998888888889999999
Q ss_pred EeCC
Q 016427 276 KASP 279 (390)
Q Consensus 276 ~T~P 279 (390)
.|+-
T Consensus 709 eT~~ 712 (1381)
T KOG4221|consen 709 ETPE 712 (1381)
T ss_pred cCcc
Confidence 9973
No 63
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=95.59 E-value=0.12 Score=38.72 Aligned_cols=37 Identities=16% Similarity=0.064 Sum_probs=25.7
Q ss_pred EEEEEeCCCCCCCEEEEEEceecCCCCccccceEEEE
Q 016427 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFK 276 (390)
Q Consensus 240 iH~a~LtgL~PgT~Y~YrVG~~~~dg~~~wS~~~sF~ 276 (390)
-.++.+.+|+|+++|.+||.....++...|+....|+
T Consensus 56 ~~~~~i~~l~p~~~Y~~~v~a~~~~~~~~~s~~~~~~ 92 (93)
T cd00063 56 ETSYTLTGLKPGTEYEFRVRAVNGGGESPPSESVTVT 92 (93)
T ss_pred ccEEEEccccCCCEEEEEEEEECCCccCCCccccccc
Confidence 3567889999999999999876433334455544444
No 64
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=95.55 E-value=0.02 Score=49.53 Aligned_cols=44 Identities=14% Similarity=0.183 Sum_probs=28.8
Q ss_pred HHHHHHcCCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEEeecCccc
Q 016427 318 RQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIARFVIIH 371 (390)
Q Consensus 318 ~~l~~~~~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymva~GNHE~ 371 (390)
+++.....++|+++|.||+.. ..++ .++.+ ...|+..+.||||.
T Consensus 14 ~~~~~~~~~~d~ii~~GD~~~-----~~~~----~~~~~-~~~~~~~V~GN~D~ 57 (129)
T cd07403 14 PEIKVRLEGVDLILSAGDLPK-----EYLE----YLVTM-LNVPVYYVHGNHDV 57 (129)
T ss_pred hHHHhhCCCCCEEEECCCCCh-----HHHH----HHHHH-cCCCEEEEeCCCcc
Confidence 444444588999999999842 1122 22222 35688899999994
No 65
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=95.50 E-value=0.027 Score=53.58 Aligned_cols=47 Identities=13% Similarity=0.166 Sum_probs=34.3
Q ss_pred CccEEEEeCccccccC----C---------chhHHHHHHhhhhHhccceEEEeecCcccc
Q 016427 326 NIDIVFHIGDICYANG----Y---------ISQWDQFTAQIEPIASTVPYMIARFVIIHY 372 (390)
Q Consensus 326 ~~DfVlhiGDisYa~G----~---------~~~WD~F~~~iepias~vPymva~GNHE~~ 372 (390)
++|.|++.||+..... . ...+..+.+.++.+.+.+|++.++||||..
T Consensus 35 ~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~v~~ipGNHD~~ 94 (243)
T cd07386 35 RVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSHIKIIIIPGNHDAV 94 (243)
T ss_pred CccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccCCeEEEeCCCCCcc
Confidence 5799999999986421 0 122445556666777789999999999974
No 66
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=95.36 E-value=0.066 Score=52.86 Aligned_cols=79 Identities=8% Similarity=-0.011 Sum_probs=56.4
Q ss_pred CCeEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcCCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEE
Q 016427 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (390)
Q Consensus 285 ~~~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymv 364 (390)
..++++.+.|++.... +......+.++.+ ..+|+|+..||+.... ....+.+..+.++++.+..+.+.
T Consensus 43 ~~~~iv~lSDlH~~~~---------~~~~~~~~~~i~~--~~~DlivltGD~~~~~-~~~~~~~~~~~L~~L~~~~gv~a 110 (284)
T COG1408 43 QGLKIVQLSDLHSLPF---------REEKLALLIAIAN--ELPDLIVLTGDYVDGD-RPPGVAALALFLAKLKAPLGVFA 110 (284)
T ss_pred CCeEEEEeehhhhchh---------hHHHHHHHHHHHh--cCCCEEEEEeeeecCC-CCCCHHHHHHHHHhhhccCCEEE
Confidence 3589999999987643 1111233334443 4569999999999742 23446777788888999999999
Q ss_pred eecCccccccC
Q 016427 365 ARFVIIHYVAH 375 (390)
Q Consensus 365 a~GNHE~~~~~ 375 (390)
+.||||+....
T Consensus 111 v~GNHd~~~~~ 121 (284)
T COG1408 111 VLGNHDYGVDR 121 (284)
T ss_pred Eeccccccccc
Confidence 99999977553
No 67
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=95.18 E-value=0.052 Score=53.97 Aligned_cols=76 Identities=18% Similarity=0.138 Sum_probs=42.9
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--------CCccEEEEeCccccccCCchhHHHHHHhhhhHhcc
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--------KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--------~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~ 359 (390)
+++++||.+.. ...++++++.+ ...+.+++.||++...-...+--.|+.+.+.-...
T Consensus 3 ~iyaIGDIHG~---------------~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~ 67 (304)
T cd07421 3 VVICVGDIHGY---------------ISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPK 67 (304)
T ss_pred eEEEEEeccCC---------------HHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccc
Confidence 58999999753 23445554432 13568999999995332222222233332221111
Q ss_pred ceEEEeecCccccccCCCC
Q 016427 360 VPYMIARFVIIHYVAHQLG 378 (390)
Q Consensus 360 vPymva~GNHE~~~~~~~g 378 (390)
..++...||||..+-..++
T Consensus 68 ~~vv~LrGNHE~~~l~fL~ 86 (304)
T cd07421 68 QRHVFLCGNHDFAFAAFLG 86 (304)
T ss_pred cceEEEecCChHHHHhHhh
Confidence 2467889999966544444
No 68
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=95.03 E-value=0.067 Score=52.06 Aligned_cols=64 Identities=13% Similarity=0.101 Sum_probs=41.4
Q ss_pred EEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc---CCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEEee
Q 016427 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAR 366 (390)
Q Consensus 290 ~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~---~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymva~ 366 (390)
.++||.+.. ...++++++++ +..|.+++.||++. .|-.+ .+-++.+..+. -....+.
T Consensus 2 yvIGDIHG~---------------~~~L~~LL~~i~~~~~~D~Li~lGDlVd-RGp~s--~evl~~l~~l~--~~v~~Vl 61 (257)
T cd07422 2 YAIGDIQGC---------------YDELQRLLEKINFDPAKDRLWLVGDLVN-RGPDS--LETLRFVKSLG--DSAKTVL 61 (257)
T ss_pred EEEECCCCC---------------HHHHHHHHHhcCCCCCCCEEEEecCcCC-CCcCH--HHHHHHHHhcC--CCeEEEc
Confidence 689999753 34567777765 35799999999995 44433 22233332222 2567899
Q ss_pred cCccccc
Q 016427 367 FVIIHYV 373 (390)
Q Consensus 367 GNHE~~~ 373 (390)
||||...
T Consensus 62 GNHD~~l 68 (257)
T cd07422 62 GNHDLHL 68 (257)
T ss_pred CCchHHH
Confidence 9999653
No 69
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.01 E-value=0.07 Score=49.88 Aligned_cols=49 Identities=10% Similarity=0.014 Sum_probs=33.1
Q ss_pred CCccEEEEeCccccccCC--chhHHHHHHhhhhHh--------------------ccceEEEeecCcccccc
Q 016427 325 KNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA--------------------STVPYMIARFVIIHYVA 374 (390)
Q Consensus 325 ~~~DfVlhiGDisYa~G~--~~~WD~F~~~iepia--------------------s~vPymva~GNHE~~~~ 374 (390)
-+||.|+..|||-. .+. ..+|.+.......+. ..+|++.++||||+.+.
T Consensus 43 l~Pd~V~fLGDLfd-~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~~ 113 (193)
T cd08164 43 LKPDAVVVLGDLFS-SQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGYG 113 (193)
T ss_pred cCCCEEEEeccccC-CCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCCC
Confidence 58999999999983 333 334444333332222 14899999999999874
No 70
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=94.95 E-value=0.078 Score=48.80 Aligned_cols=76 Identities=12% Similarity=0.058 Sum_probs=44.6
Q ss_pred EEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEEEEeCcccccc-C----CchhHHHH-HHhhhhHhccce
Q 016427 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYAN-G----YISQWDQF-TAQIEPIASTVP 361 (390)
Q Consensus 290 ~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~-G----~~~~WD~F-~~~iepias~vP 361 (390)
+++.|++.+.... ........+.+.. .++|.+++.||+...- + ........ ....+......+
T Consensus 1 ~~iSDlHlg~~~~---------~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 71 (217)
T cd07398 1 LFISDLHLGDGGP---------AADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTR 71 (217)
T ss_pred CEeeeecCCCCCC---------CHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCe
Confidence 4678888764321 1112233333332 4899999999998531 1 11111221 334445567899
Q ss_pred EEEeecCcccccc
Q 016427 362 YMIARFVIIHYVA 374 (390)
Q Consensus 362 ymva~GNHE~~~~ 374 (390)
++.+.||||....
T Consensus 72 v~~v~GNHD~~~~ 84 (217)
T cd07398 72 VYYVPGNHDFLLG 84 (217)
T ss_pred EEEECCCchHHHH
Confidence 9999999997643
No 71
>PRK04036 DNA polymerase II small subunit; Validated
Probab=94.90 E-value=0.1 Score=55.47 Aligned_cols=81 Identities=12% Similarity=0.177 Sum_probs=48.6
Q ss_pred CCeEEEEEecCCCCCCCCCCcccccccCcH-HHHHHHHHH-------cCCccEEEEeCccccccC-Cc------------
Q 016427 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSL-NTTRQLIQD-------LKNIDIVFHIGDICYANG-YI------------ 343 (390)
Q Consensus 285 ~~~~f~vfGDmG~~~~dgs~~~~~~qp~s~-~T~~~l~~~-------~~~~DfVlhiGDisYa~G-~~------------ 343 (390)
...+++++.|++.+.. .+ ....+ ..++++... ..+++.+++.||+....+ +.
T Consensus 242 ~~~~i~~ISDlHlgs~----~~---~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~ 314 (504)
T PRK04036 242 EKVYAVFISDVHVGSK----EF---LEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIY 314 (504)
T ss_pred CccEEEEEcccCCCCc----ch---hHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhH
Confidence 3489999999996542 11 00011 112222211 246899999999985422 10
Q ss_pred hhHHHHHHhhhhHhccceEEEeecCcccc
Q 016427 344 SQWDQFTAQIEPIASTVPYMIARFVIIHY 372 (390)
Q Consensus 344 ~~WD~F~~~iepias~vPymva~GNHE~~ 372 (390)
.+.+.+.+.++.+.+.+|++.++||||..
T Consensus 315 ~~~~~l~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 315 EQYEAAAEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHHHHHHHhhhcCCeEEEecCCCcch
Confidence 11233444555666789999999999964
No 72
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=94.74 E-value=0.055 Score=51.89 Aligned_cols=70 Identities=19% Similarity=0.301 Sum_probs=40.6
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcCCccEEEEeCccccccCCchhHH-------------------
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD------------------- 347 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~DfVlhiGDisYa~G~~~~WD------------------- 347 (390)
-++++..|....- + .++.+..++++ ..+|+|+.+|||.-+......|.
T Consensus 6 ~kilA~s~~~g~~-----e-------~l~~l~~~~~e-~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~ 72 (255)
T PF14582_consen 6 RKILAISNFRGDF-----E-------LLERLVEVIPE-KGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEEC 72 (255)
T ss_dssp -EEEEEE--TT-H-----H-------HHHHHHHHHHH-HT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHH
T ss_pred hhheeecCcchHH-----H-------HHHHHHhhccc-cCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhh
Confidence 3677787764221 1 23444445555 48999999999976655556666
Q ss_pred -------HHHHhhhhHhccceEEEeecCccc
Q 016427 348 -------QFTAQIEPIASTVPYMIARFVIIH 371 (390)
Q Consensus 348 -------~F~~~iepias~vPymva~GNHE~ 371 (390)
.||+.+. ...+|.|++|||||.
T Consensus 73 ~~~e~~~~ff~~L~--~~~~p~~~vPG~~Da 101 (255)
T PF14582_consen 73 YDSEALDKFFRILG--ELGVPVFVVPGNMDA 101 (255)
T ss_dssp HHHHHHHHHHHHHH--CC-SEEEEE--TTS-
T ss_pred hhHHHHHHHHHHHH--hcCCcEEEecCCCCc
Confidence 7777665 457999999999996
No 73
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=94.36 E-value=0.11 Score=48.23 Aligned_cols=66 Identities=15% Similarity=0.161 Sum_probs=40.4
Q ss_pred EEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEEEEeCccccccCCchhHHHHHHhhhhHhc-cceEEEee
Q 016427 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS-TVPYMIAR 366 (390)
Q Consensus 290 ~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias-~vPymva~ 366 (390)
+++||++.. ...+.+++++. ...|.+++.||+... |..+ .+-++.+..+.. ..+++...
T Consensus 1 ~~igDiHg~---------------~~~l~~~l~~~~~~~~d~li~lGD~vdr-g~~~--~~~l~~l~~~~~~~~~~~~l~ 62 (225)
T cd00144 1 YVIGDIHGC---------------LDDLLRLLEKIGFPPNDKLIFLGDYVDR-GPDS--VEVIDLLLALKILPDNVILLR 62 (225)
T ss_pred CEEeCCCCC---------------HHHHHHHHHHhCCCCCCEEEEECCEeCC-CCCc--HHHHHHHHHhcCCCCcEEEEc
Confidence 378999742 24556767664 368999999999954 3322 222222221111 34788999
Q ss_pred cCccccc
Q 016427 367 FVIIHYV 373 (390)
Q Consensus 367 GNHE~~~ 373 (390)
||||...
T Consensus 63 GNHe~~~ 69 (225)
T cd00144 63 GNHEDML 69 (225)
T ss_pred cCchhhh
Confidence 9999653
No 74
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=94.06 E-value=0.091 Score=49.83 Aligned_cols=81 Identities=12% Similarity=-0.000 Sum_probs=42.3
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCcc-EEEEeCccccccCCchhHHHHHHhhhhHhccceEE
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~D-fVlhiGDisYa~G~~~~WD~F~~~iepias~vPym 363 (390)
++++.++|++.. .... .+.+-...+..+++++ .++| +++..||+....... .+.+....++-+.+.-+-.
T Consensus 1 l~i~~~sD~hg~-~~~~-----~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~-~~~~~~~~~~~l~~~g~d~ 73 (252)
T cd00845 1 LTILHTNDLHGH-FEPA-----GGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPS-TATKGEANIELMNALGYDA 73 (252)
T ss_pred CEEEEecccccC-cccc-----CCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccch-hccCCcHHHHHHHhcCCCE
Confidence 478999999832 1100 0112233445555543 3466 889999997543321 1222222222222222444
Q ss_pred EeecCcccccc
Q 016427 364 IARFVIIHYVA 374 (390)
Q Consensus 364 va~GNHE~~~~ 374 (390)
.++||||+++.
T Consensus 74 ~~~GNHe~d~g 84 (252)
T cd00845 74 VTIGNHEFDYG 84 (252)
T ss_pred Eeecccccccc
Confidence 67899998754
No 75
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=93.82 E-value=0.15 Score=49.68 Aligned_cols=47 Identities=9% Similarity=0.036 Sum_probs=30.7
Q ss_pred CCccEEEEeCccccccCCc-----------hhHHHHHHhhhhHh-ccceEEEeecCccc
Q 016427 325 KNIDIVFHIGDICYANGYI-----------SQWDQFTAQIEPIA-STVPYMIARFVIIH 371 (390)
Q Consensus 325 ~~~DfVlhiGDisYa~G~~-----------~~WD~F~~~iepia-s~vPymva~GNHE~ 371 (390)
..+|++|..||+.-..... ..+..|.+.++... ..+|...+.||||.
T Consensus 27 ~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~GNHE~ 85 (262)
T cd00844 27 TKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIGGNHEA 85 (262)
T ss_pred CCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEECCCCCC
Confidence 5799999999996432111 23455555444322 46777999999994
No 76
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=93.72 E-value=0.86 Score=50.75 Aligned_cols=40 Identities=23% Similarity=0.388 Sum_probs=34.9
Q ss_pred EEEEeCCCCCCCEEEEEEceecCCCCccccceEEEEeCCC
Q 016427 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (390)
Q Consensus 241 H~a~LtgL~PgT~Y~YrVG~~~~dg~~~wS~~~sF~T~P~ 280 (390)
.+++|+||+|||.|.+||......|-+..|....|.|.+.
T Consensus 498 ~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 498 TTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred ceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 3689999999999999999876666667899999999985
No 77
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=93.51 E-value=0.11 Score=55.61 Aligned_cols=57 Identities=18% Similarity=0.130 Sum_probs=37.7
Q ss_pred HHHHHHHHcCCccEEEEeCccccccCC----c---hhHHHHHHhhhhHhccceEEEeecCcccc
Q 016427 316 TTRQLIQDLKNIDIVFHIGDICYANGY----I---SQWDQFTAQIEPIASTVPYMIARFVIIHY 372 (390)
Q Consensus 316 T~~~l~~~~~~~DfVlhiGDisYa~G~----~---~~WD~F~~~iepias~vPymva~GNHE~~ 372 (390)
++++|.+..+++|||++.||+.--+.. + ..-....+.+......+|+++++||||..
T Consensus 200 ~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~ 263 (577)
T KOG3770|consen 200 ALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIH 263 (577)
T ss_pred HHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCC
Confidence 344444444669999999999865421 0 11122334555666799999999999965
No 78
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=93.06 E-value=0.11 Score=48.42 Aligned_cols=53 Identities=17% Similarity=0.208 Sum_probs=38.6
Q ss_pred CCccEEEEeCccccccCC-------------------------chhHHHHH--HhhhhHhccceEEEeecCccccccCCC
Q 016427 325 KNIDIVFHIGDICYANGY-------------------------ISQWDQFT--AQIEPIASTVPYMIARFVIIHYVAHQL 377 (390)
Q Consensus 325 ~~~DfVlhiGDisYa~G~-------------------------~~~WD~F~--~~iepias~vPymva~GNHE~~~~~~~ 377 (390)
.++||++|.||..|+++. ...+..++ ..++.+.+++|++.+.-+||+..+-..
T Consensus 28 ~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~~n~~~ 107 (228)
T cd07389 28 EDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDNWGG 107 (228)
T ss_pred cCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCCHHHHHHhhcCCEEEecccccccccccc
Confidence 789999999999999741 11122222 235667889999999999998876433
No 79
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=92.96 E-value=0.25 Score=48.76 Aligned_cols=64 Identities=9% Similarity=0.107 Sum_probs=40.6
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcC---CccEEEEeCccccccCCc-hhHHHHHHhhhhHhccceEE
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK---NIDIVFHIGDICYANGYI-SQWDQFTAQIEPIASTVPYM 363 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~---~~DfVlhiGDisYa~G~~-~~WD~F~~~iepias~vPym 363 (390)
+..++||.+.. ...++++++++. ..|-+++.||++...... ...+ |+.++. . ...
T Consensus 2 ~~YvIGDIHGc---------------~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~-~l~~l~---~--~~~ 60 (279)
T TIGR00668 2 ATYLIGDLHGC---------------YDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLR-YVKSLG---D--AVR 60 (279)
T ss_pred cEEEEEcccCC---------------HHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHH-HHHhcC---C--CeE
Confidence 36899999754 245677777753 578999999999543332 2233 222221 1 245
Q ss_pred EeecCcccc
Q 016427 364 IARFVIIHY 372 (390)
Q Consensus 364 va~GNHE~~ 372 (390)
.+.||||..
T Consensus 61 ~VlGNHD~~ 69 (279)
T TIGR00668 61 LVLGNHDLH 69 (279)
T ss_pred EEEChhHHH
Confidence 799999953
No 80
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=92.94 E-value=0.26 Score=48.38 Aligned_cols=85 Identities=12% Similarity=-0.001 Sum_probs=43.9
Q ss_pred eEEEEEecCCCCCCCCCCcc-cccccCcHHHHHHHHHHc--CCc-cEEEEeCccccccCCchhHHHHHHhhhhHhccceE
Q 016427 287 QQVIIFGDMGKDEADGSNEY-NNFQRGSLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~-~~~qp~s~~T~~~l~~~~--~~~-DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPy 362 (390)
++++.+.|++..-.. . .+ ..-+.+-...+..++++. .+. .+++..||+.....+.+.+.+- +.+-.++..+.|
T Consensus 1 i~il~tnD~Hg~~~~-~-~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g-~~~~~~~n~~g~ 77 (288)
T cd07412 1 VQILAINDFHGRLEP-P-GKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQD-EPTIEALNAMGV 77 (288)
T ss_pred CeEEEEeccccCccC-C-CCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccC-CcHHHHHHhhCC
Confidence 478999999743211 0 00 001222344555555543 223 4999999997544332222111 122223334444
Q ss_pred -EEeecCcccccc
Q 016427 363 -MIARFVIIHYVA 374 (390)
Q Consensus 363 -mva~GNHE~~~~ 374 (390)
+.++||||+++.
T Consensus 78 Da~t~GNHefd~G 90 (288)
T cd07412 78 DASAVGNHEFDEG 90 (288)
T ss_pred eeeeecccccccC
Confidence 567899998864
No 81
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=92.38 E-value=0.39 Score=48.31 Aligned_cols=68 Identities=18% Similarity=0.093 Sum_probs=39.8
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcC---CccEEEEeCccccccCCchhHHHHHHhhhhHhccce--E
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK---NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVP--Y 362 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~---~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vP--y 362 (390)
+++++||++.. ...+.++++..+ .-+-.++.||++. +|..+. +=+..+-.+.-..| +
T Consensus 52 ~~~vvGDiHG~---------------~~dL~~il~~~g~~~~~~~~lFLGDyVD-RG~~s~--Evl~ll~~lk~~~p~~v 113 (321)
T cd07420 52 QVTICGDLHGK---------------LDDLFLIFYKNGLPSPENPYVFNGDFVD-RGKRSI--EILIILFAFFLVYPNEV 113 (321)
T ss_pred CeEEEEeCCCC---------------HHHHHHHHHHcCCCCccceEEEeccccC-CCCCcH--HHHHHHHHHhhcCCCcE
Confidence 58999999743 345677776543 2357889999994 454321 11111111111223 6
Q ss_pred EEeecCccccc
Q 016427 363 MIARFVIIHYV 373 (390)
Q Consensus 363 mva~GNHE~~~ 373 (390)
....||||...
T Consensus 114 ~llRGNHE~~~ 124 (321)
T cd07420 114 HLNRGNHEDHI 124 (321)
T ss_pred EEecCchhhhh
Confidence 67899999654
No 82
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=91.97 E-value=11 Score=43.48 Aligned_cols=193 Identities=16% Similarity=0.092 Sum_probs=105.5
Q ss_pred EcccccccCCCcccEEEEEEeCC-----CCCCCCEEEEEcCCCCCCCCCCCCCCCCCCCCccCCCeeeEEcccCCCcccc
Q 016427 49 ASPSILGMKGQNSDWLTVEYNSP-----NPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQYKS 123 (390)
Q Consensus 49 ~~p~~l~~~~~~~~~v~v~~~~~-----~p~~~dwi~~~sp~~~~~~~~~~~~~~~~~~~~~~~piky~~~~~~~~~~~~ 123 (390)
..|.=+.-.|.....++|+|... +-..-.++=.|.|..... .+...-+....==+|.|.+.+-..|
T Consensus 718 ~~P~nv~g~g~~~~eLvItW~Pl~~~~qNG~gfgY~Vswr~~g~~~-------~W~~~~v~~~d~~~~V~~~~st~~~-- 788 (1051)
T KOG3513|consen 718 VNPSNVKGGGGSPTELVITWEPLPEEEQNGPGFGYRVSWRPQGADK-------EWKEVIVSNQDQPRYVVSNESTEPF-- 788 (1051)
T ss_pred cCCccccccCCCCceEEEEeccCCHHHccCCCceEEEEEEeCCCCc-------ccceeEecccCCceEEEcCCCCCCc--
Confidence 34555555566678899999984 344556777788876531 1111111111114677777653234
Q ss_pred eeceEEEEEEeecccceEEEEEecCCCCceEEEeecceecCCCCCCcccEeeeCCCCCeEEEEEEeCCCC--CCCccEEE
Q 016427 124 TGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGYGI--NEAEPFVE 201 (390)
Q Consensus 124 ~G~gsl~~~L~n~R~~~~f~~f~~~~~~p~l~a~S~~v~f~~~~~P~qvhLa~~~d~~~m~VtW~T~~~~--~~~~~~V~ 201 (390)
-.-.++++.+|.+-+= ..+++.+.-|..= .-+.+|..+++- .-+.++|.|.|....-. ....-.|+
T Consensus 789 -tpyevKVqa~N~~GeG--------p~s~~~v~~S~Ed--~P~~ap~~~~~~-~~s~s~~~v~W~~~~~~nG~l~gY~v~ 856 (1051)
T KOG3513|consen 789 -TPYEVKVQAINDQGEG--------PESQVTVGYSGED--EPPVAPTKLSAK-PLSSSEVNLSWKPPLWDNGKLTGYEVK 856 (1051)
T ss_pred -ceeEEEEEEecCCCCC--------CCCceEEEEcCCC--CCCCCCccceee-cccCceEEEEecCcCccCCccceeEEE
Confidence 3567888999977431 1222333333211 114456655543 33458999999433211 12345788
Q ss_pred EeecCCCCccccccceEEeccccCCCCCccccccCCceEEEEEeCCCCCCCEEEEEEceecCCCCccccceEEEEeCCCC
Q 016427 202 WGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (390)
Q Consensus 202 yG~~~~~~~~~~a~t~Ty~~~~mcg~PA~t~g~rdpg~iH~a~LtgL~PgT~Y~YrVG~~~~dg~~~wS~~~sF~T~P~~ 281 (390)
|....+... ..... . -.+-.-.+.|+||+|+|.|+..|..-..-|.+.-|...+-+|.+.+
T Consensus 857 Y~~~~~~~~--~~~~~--~---------------i~~~~~~~~ltgL~~~T~Y~~~vrA~nsaG~Gp~s~~~~~tt~k~p 917 (1051)
T KOG3513|consen 857 YWKINEKEG--SLSRV--Q---------------IAGNRTSWRLTGLEPNTKYRFYVRAYTSAGGGPASSEENVTTKKAP 917 (1051)
T ss_pred EEEcCCCcc--cccce--e---------------ecCCcceEeeeCCCCCceEEEEEEEecCCCCCCCccceeccccCCC
Confidence 876655421 11110 0 0133446889999999999999987654443444555555555443
No 83
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=91.96 E-value=0.35 Score=46.47 Aligned_cols=81 Identities=9% Similarity=0.013 Sum_probs=41.2
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcC--CccEEEEeCccccccCCchhHHHHHHhhhhHhc-cceEE
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIAS-TVPYM 363 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~--~~DfVlhiGDisYa~G~~~~WD~F~~~iepias-~vPym 363 (390)
++++...|++..-.. .. -+.+....+..++++.. ..++++..||+...... +.+..-...++-+.. ..-+|
T Consensus 1 i~il~~~D~H~~~~~-~~----~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~ln~~g~d~~ 74 (257)
T cd07408 1 ITILHTNDIHGRIDE-DD----NNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPI-SDLDKGETIIKIMNAVGYDAV 74 (257)
T ss_pred CEEEEeccCcccccC-CC----CccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchh-hhhcCCcHHHHHHHhcCCcEE
Confidence 478899999753211 00 01222344455555432 46899999999643211 111111112222222 34555
Q ss_pred EeecCcccccc
Q 016427 364 IARFVIIHYVA 374 (390)
Q Consensus 364 va~GNHE~~~~ 374 (390)
++||||+++.
T Consensus 75 -~~GNHefd~G 84 (257)
T cd07408 75 -TPGNHEFDYG 84 (257)
T ss_pred -ccccccccCC
Confidence 5799998764
No 84
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=91.71 E-value=1.6 Score=31.30 Aligned_cols=22 Identities=18% Similarity=0.256 Sum_probs=19.2
Q ss_pred EEEEEeCCCCCCCEEEEEEcee
Q 016427 240 IHTGFLRELWPNAMYTYKLGHR 261 (390)
Q Consensus 240 iH~a~LtgL~PgT~Y~YrVG~~ 261 (390)
-+...+.+|+|++.|.+||...
T Consensus 56 ~~~~~i~~L~~~~~Y~v~v~a~ 77 (83)
T smart00060 56 STSYTLTGLKPGTEYEFRVRAV 77 (83)
T ss_pred ccEEEEeCcCCCCEEEEEEEEE
Confidence 4678899999999999999765
No 85
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=91.67 E-value=0.34 Score=47.13 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=38.2
Q ss_pred EEEEEecC-CCCCCCCCCcccccccCcHHHHHHHHHHcCCccEEEEeCcccccc-CCchhHHHHHHhhhhHhccceEEEe
Q 016427 288 QVIIFGDM-GKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPYMIA 365 (390)
Q Consensus 288 ~f~vfGDm-G~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~DfVlhiGDisYa~-G~~~~WD~F~~~iepias~vPymva 365 (390)
|++++||. |..++. .-...++++.++ .++||++.+||.+-.. |....--+.++.+ -+=. ++
T Consensus 1 ~ilfigdi~g~~G~~----------~~~~~l~~lk~~-~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~-----G~D~-iT 63 (255)
T cd07382 1 KILFIGDIVGKPGRK----------AVKEHLPKLKKE-YKIDFVIANGENAAGGKGITPKIAKELLSA-----GVDV-IT 63 (255)
T ss_pred CEEEEEeCCCHHHHH----------HHHHHHHHHHHH-CCCCEEEECCccccCCCCCCHHHHHHHHhc-----CCCE-EE
Confidence 58899998 332210 011233344332 4689999999997432 3332222222222 2334 45
Q ss_pred ecCcccccc
Q 016427 366 RFVIIHYVA 374 (390)
Q Consensus 366 ~GNHE~~~~ 374 (390)
.||||+++.
T Consensus 64 lGNH~fD~g 72 (255)
T cd07382 64 MGNHTWDKK 72 (255)
T ss_pred ecccccCcc
Confidence 699998876
No 86
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=90.97 E-value=0.53 Score=43.17 Aligned_cols=65 Identities=15% Similarity=0.135 Sum_probs=41.3
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcCCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEEee
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAR 366 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymva~ 366 (390)
.++++++|++...+. ... .......+++|+|+|.||+....-+. .|-.. -..++..+.
T Consensus 2 m~ilviSDtH~~~~~------------~~~-~~~~~~~~~~d~vih~GD~~~~~~~~----~l~~~-----~~~~i~~V~ 59 (172)
T COG0622 2 MKILVISDTHGPLRA------------IEK-ALKIFNLEKVDAVIHAGDSTSPFTLD----ALEGG-----LAAKLIAVR 59 (172)
T ss_pred cEEEEEeccCCChhh------------hhH-HHHHhhhcCCCEEEECCCcCCccchH----Hhhcc-----cccceEEEE
Confidence 479999999865320 111 11222247999999999998653221 11111 257889999
Q ss_pred cCccccc
Q 016427 367 FVIIHYV 373 (390)
Q Consensus 367 GNHE~~~ 373 (390)
||.|.+.
T Consensus 60 GN~D~~~ 66 (172)
T COG0622 60 GNCDGEV 66 (172)
T ss_pred ccCCCcc
Confidence 9999874
No 87
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=90.54 E-value=0.53 Score=45.34 Aligned_cols=81 Identities=15% Similarity=0.099 Sum_probs=41.2
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCcc-EEEEeCccccccCCchhHHHHHHhhhhHhccceE-
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQWDQFTAQIEPIASTVPY- 362 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~D-fVlhiGDisYa~G~~~~WD~F~~~iepias~vPy- 362 (390)
++++.+.|++.-.. . .. -+.+....+..++++. ++++ +++..||+...... ..+.+ .+.+.+.+..+.|
T Consensus 1 ~~il~~nd~~~~~~--~-~~--~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~-~~~~~-g~~~~~~l~~l~~d 73 (257)
T cd07406 1 FTILHFNDVYEIAP--L-DG--GPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLL-STATK-GKQMVPVLNALGVD 73 (257)
T ss_pred CeEEEEccceeecc--c-CC--CCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccc-hhhcC-CccHHHHHHhcCCc
Confidence 46778888863211 0 00 0112334455555543 3466 99999999743322 11111 0122333333333
Q ss_pred EEeecCcccccc
Q 016427 363 MIARFVIIHYVA 374 (390)
Q Consensus 363 mva~GNHE~~~~ 374 (390)
+.++||||+++.
T Consensus 74 ~~~~GNHefd~g 85 (257)
T cd07406 74 LACFGNHEFDFG 85 (257)
T ss_pred EEeecccccccC
Confidence 557999998764
No 88
>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1 (Q61026 from SWISSPROT), and thus enhances transcriptional activation by a number of nuclear receptors. CoCoA has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region [].
Probab=89.84 E-value=2.2 Score=45.79 Aligned_cols=93 Identities=24% Similarity=0.414 Sum_probs=63.6
Q ss_pred EEEEEeC-C--CCCCCCEEEEEcCCCCCCCCCCCCCCCCCCCCccCCCeeeEEcccCCCcccceec---eEEEEE---Ee
Q 016427 64 LTVEYNS-P--NPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQYKSTGK---GSLKLQ---LI 134 (390)
Q Consensus 64 v~v~~~~-~--~p~~~dwi~~~sp~~~~~~~~~~~~~~~~~~~~~~~piky~~~~~~~~~~~~~G~---gsl~~~---L~ 134 (390)
|+..|+- + .|+..||||||=-.-.+ ......|.|+... .+| ..|+ ..+.|+ |.
T Consensus 22 v~C~Ytlt~~~~ps~~DWIGiFKVGw~s----------------~rdY~Tf~Wa~~p-~~~-~~~s~~~~~V~F~ayyLP 83 (546)
T PF07888_consen 22 VECHYTLTPGFHPSSKDWIGIFKVGWSS----------------TRDYYTFVWAPVP-ENY-VEGSAVNCQVQFQAYYLP 83 (546)
T ss_pred eEEEEecCCCCCCCCCCeeEEeecCCCc----------------hhheeeEEeeccC-ccc-cCCCccceEEEECcccCC
Confidence 8888885 2 89999999999643221 1345788888642 355 3443 478886 66
Q ss_pred ec-ccceEEEEEecCCCCceEEEeecceecCCCCCCcccEeeeCC
Q 016427 135 NQ-RSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGK 178 (390)
Q Consensus 135 n~-R~~~~f~~f~~~~~~p~l~a~S~~v~f~~~~~P~qvhLa~~~ 178 (390)
+. =.-|.|++....- .++++|.+..|..|+ |.-.-+++..
T Consensus 84 k~~~e~YqfcYv~~~g---~V~G~S~pFqf~~~~-p~eeLvtle~ 124 (546)
T PF07888_consen 84 KDDDEFYQFCYVDQKG---EVRGASTPFQFRAPK-PLEELVTLED 124 (546)
T ss_pred CCCCCeEEEEEECCCc---cEEEecCCcccCCCC-ccccceeecc
Confidence 54 3448998876533 688999999998764 6666667765
No 89
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=89.55 E-value=1.1 Score=46.06 Aligned_cols=68 Identities=16% Similarity=0.154 Sum_probs=41.0
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcC--Cc-cEEEEeCccccccCCchhHHHHHHhhhhHhccce--E
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NI-DIVFHIGDICYANGYISQWDQFTAQIEPIASTVP--Y 362 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~--~~-DfVlhiGDisYa~G~~~~WD~F~~~iepias~vP--y 362 (390)
+++++||++.. ..++.++++..+ .. +.+++.||++ ++|..+ -+-+..+-.+.-..| +
T Consensus 67 ~i~VvGDIHG~---------------~~dL~~ll~~~g~~~~~~~ylFLGDyV-DRGp~S--lEvl~lL~~lki~~p~~v 128 (377)
T cd07418 67 EVVVVGDVHGQ---------------LHDVLFLLEDAGFPDQNRFYVFNGDYV-DRGAWG--LETFLLLLSWKVLLPDRV 128 (377)
T ss_pred CEEEEEecCCC---------------HHHHHHHHHHhCCCCCCceEEEecccc-CCCCCh--HHHHHHHHHHhhccCCeE
Confidence 58999999754 356677777543 22 4589999999 455432 122222222212222 5
Q ss_pred EEeecCccccc
Q 016427 363 MIARFVIIHYV 373 (390)
Q Consensus 363 mva~GNHE~~~ 373 (390)
....||||...
T Consensus 129 ~lLRGNHE~~~ 139 (377)
T cd07418 129 YLLRGNHESKF 139 (377)
T ss_pred EEEeeeccccc
Confidence 67999999754
No 90
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=89.47 E-value=1.4 Score=43.10 Aligned_cols=67 Identities=13% Similarity=0.057 Sum_probs=39.7
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEEEEeCccccccCCchhHHHHHHhhhhHhcc--ceEE
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST--VPYM 363 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~--vPym 363 (390)
+++++||++.. ...+.+++++. ...+-+++.||++. +|..+. +-+..+..+.-. --+.
T Consensus 29 ~i~vvGDiHG~---------------~~~l~~ll~~~~~~~~~~~vfLGD~VD-rG~~s~--e~l~~l~~lk~~~p~~v~ 90 (271)
T smart00156 29 PVTVCGDIHGQ---------------FDDLLRLFDLNGPPPDTNYVFLGDYVD-RGPFSI--EVILLLFALKILYPNRVV 90 (271)
T ss_pred CEEEEEeCcCC---------------HHHHHHHHHHcCCCCCceEEEeCCccC-CCCChH--HHHHHHHHHHhcCCCCEE
Confidence 48999999743 24456666543 34578899999994 554331 111111111111 2367
Q ss_pred EeecCcccc
Q 016427 364 IARFVIIHY 372 (390)
Q Consensus 364 va~GNHE~~ 372 (390)
...||||..
T Consensus 91 llrGNHE~~ 99 (271)
T smart00156 91 LLRGNHESR 99 (271)
T ss_pred EEeccccHH
Confidence 899999974
No 91
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=89.30 E-value=0.81 Score=44.15 Aligned_cols=59 Identities=10% Similarity=0.038 Sum_probs=33.5
Q ss_pred HHHHHHHHHHc--C-CccEE-EEeCccccccCCchhHHHHHHhhhhHhccceEEEeecCcccccc
Q 016427 314 LNTTRQLIQDL--K-NIDIV-FHIGDICYANGYISQWDQFTAQIEPIASTVPYMIARFVIIHYVA 374 (390)
Q Consensus 314 ~~T~~~l~~~~--~-~~DfV-lhiGDisYa~G~~~~WD~F~~~iepias~vPymva~GNHE~~~~ 374 (390)
...+..++++. . +.|.+ ++.||+...... +.++.. .++-..+..++|-++.||||+++.
T Consensus 35 ~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g-~~~~~~l~~~g~da~~GNHefd~g 97 (264)
T cd07411 35 FAHIATLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRG-QAMVDALNALGVDAMVGHWEFTYG 97 (264)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCC-hhHHHHHHhhCCeEEecccccccC
Confidence 34445555543 3 67765 689999855432 112211 233334445666666699998864
No 92
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=89.08 E-value=1.4 Score=43.95 Aligned_cols=67 Identities=16% Similarity=0.147 Sum_probs=39.7
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcC--CccEEEEeCccccccCCchhHHHHHHhhhhHhccce--EE
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVP--YM 363 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~--~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vP--ym 363 (390)
+++++||++.. ...+.++.+... ..+-+++.||++. +|..+ -+=+..+-.+.-..| +.
T Consensus 44 ~i~ViGDIHG~---------------~~dL~~l~~~~g~~~~~~ylFLGDyVD-RG~~s--~Evi~lL~~lki~~p~~v~ 105 (305)
T cd07416 44 PVTVCGDIHGQ---------------FYDLLKLFEVGGSPANTRYLFLGDYVD-RGYFS--IECVLYLWALKILYPKTLF 105 (305)
T ss_pred CEEEEEeCCCC---------------HHHHHHHHHhcCCCCCceEEEECCccC-CCCCh--HHHHHHHHHHHhhcCCCEE
Confidence 48999999743 234566666543 3478899999994 45432 111122222222234 56
Q ss_pred EeecCcccc
Q 016427 364 IARFVIIHY 372 (390)
Q Consensus 364 va~GNHE~~ 372 (390)
...||||..
T Consensus 106 lLRGNHE~~ 114 (305)
T cd07416 106 LLRGNHECR 114 (305)
T ss_pred EEeCCCcHH
Confidence 789999965
No 93
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=88.69 E-value=1.2 Score=43.12 Aligned_cols=84 Identities=11% Similarity=0.060 Sum_probs=38.6
Q ss_pred eEEEEEecCCCCCCC-CCCcccccccCcHHHHHHHHHHc--CCccEEE-EeCccccccCCchhHH---------HHHHhh
Q 016427 287 QQVIIFGDMGKDEAD-GSNEYNNFQRGSLNTTRQLIQDL--KNIDIVF-HIGDICYANGYISQWD---------QFTAQI 353 (390)
Q Consensus 287 ~~f~vfGDmG~~~~d-gs~~~~~~qp~s~~T~~~l~~~~--~~~DfVl-hiGDisYa~G~~~~WD---------~F~~~i 353 (390)
++++.++|++..-.. ++..-.....+....+..++++. .+++.++ ..||+...... +.+. ...+.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPL-ADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHH-HHHhhhcccCCCChHHHHH
Confidence 478889998743110 00000000112233445555443 3456555 59999753321 1121 111222
Q ss_pred hhHhccceEEEeecCcccccc
Q 016427 354 EPIASTVPYMIARFVIIHYVA 374 (390)
Q Consensus 354 epias~vPymva~GNHE~~~~ 374 (390)
..+ ...+| ++||||+++.
T Consensus 80 n~~--g~d~~-~lGNHe~d~g 97 (277)
T cd07410 80 NAL--GYDAG-TLGNHEFNYG 97 (277)
T ss_pred Hhc--CCCEE-eecccCcccC
Confidence 211 23444 6799998764
No 94
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=88.62 E-value=0.79 Score=44.96 Aligned_cols=71 Identities=21% Similarity=0.192 Sum_probs=38.1
Q ss_pred EEEEEecCC-CCCCCCCCcccccccCcHHHHHHHHHHcCCccEEEEeCcccccc-CCchhHHHHHHhhhhHhccceEEEe
Q 016427 288 QVIIFGDMG-KDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPYMIA 365 (390)
Q Consensus 288 ~f~vfGDmG-~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~DfVlhiGDisYa~-G~~~~WD~F~~~iepias~vPymva 365 (390)
|++++||.= ..++. .-...++.+.++ .++||++.+||.+-.. |.....-+.+.. .-+=++ +
T Consensus 2 ~ilfiGDi~G~~Gr~----------~l~~~L~~lk~~-~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~-----~GvDvi-T 64 (266)
T TIGR00282 2 KFLFIGDVYGKAGRK----------IVKNNLPQLKSK-YQADLVIANGENTTHGKGLTLKIYEFLKQ-----SGVNYI-T 64 (266)
T ss_pred eEEEEEecCCHHHHH----------HHHHHHHHHHHh-CCCCEEEEcCcccCCCCCCCHHHHHHHHh-----cCCCEE-E
Confidence 799999983 22110 001223333332 4689999999998332 233222222221 124444 5
Q ss_pred ecCccccccC
Q 016427 366 RFVIIHYVAH 375 (390)
Q Consensus 366 ~GNHE~~~~~ 375 (390)
.|||+.++..
T Consensus 65 ~GNH~~Dkge 74 (266)
T TIGR00282 65 MGNHTWFQKL 74 (266)
T ss_pred ccchhccCcH
Confidence 5999998754
No 95
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=88.34 E-value=1.4 Score=43.51 Aligned_cols=66 Identities=17% Similarity=0.229 Sum_probs=44.7
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcCCccEEEEeCccccccCCchhHHHHHHhhhhHhccceE---E
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY---M 363 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPy---m 363 (390)
.||+..+|.+.-..+ +. +++.-|+.+|+||... .|....--.|-+ ..-+.|| +
T Consensus 62 ~r~VcisdtH~~~~~------------------i~-~~p~gDvlihagdfT~-~g~~~ev~~fn~----~~gslph~yKI 117 (305)
T KOG3947|consen 62 ARFVCISDTHELTFD------------------IN-DIPDGDVLIHAGDFTN-LGLPEEVIKFNE----WLGSLPHEYKI 117 (305)
T ss_pred eEEEEecCcccccCc------------------cc-cCCCCceEEeccCCcc-ccCHHHHHhhhH----HhccCcceeeE
Confidence 799999998753221 11 4678899999999983 343322233333 3445666 6
Q ss_pred EeecCccccccCC
Q 016427 364 IARFVIIHYVAHQ 376 (390)
Q Consensus 364 va~GNHE~~~~~~ 376 (390)
+..||||..+||.
T Consensus 118 VIaGNHELtFd~e 130 (305)
T KOG3947|consen 118 VIAGNHELTFDHE 130 (305)
T ss_pred EEeeccceeeccc
Confidence 8889999999985
No 96
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=88.26 E-value=1.7 Score=42.97 Aligned_cols=67 Identities=15% Similarity=0.082 Sum_probs=39.5
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEEEEeCccccccCCchhHHHHHHhhhhHhcc--ceEE
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST--VPYM 363 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~--vPym 363 (390)
.+.++||++.. ...+.++.+.. +..+-+++.||++. +|..+. +-+..+..+.-. --+.
T Consensus 43 ~i~vvGDIHG~---------------~~dL~~ll~~~~~~~~~~~lfLGDyVD-RG~~s~--evl~ll~~lk~~~p~~v~ 104 (285)
T cd07415 43 PVTVCGDIHGQ---------------FYDLLELFRVGGDPPDTNYLFLGDYVD-RGYYSV--ETFLLLLALKVRYPDRIT 104 (285)
T ss_pred CEEEEEeCCCC---------------HHHHHHHHHHcCCCCCCeEEEEeEECC-CCcCHH--HHHHHHHHHhhcCCCcEE
Confidence 38999999743 24456666543 34567888999994 554332 111222222112 2478
Q ss_pred EeecCcccc
Q 016427 364 IARFVIIHY 372 (390)
Q Consensus 364 va~GNHE~~ 372 (390)
...||||..
T Consensus 105 llrGNHE~~ 113 (285)
T cd07415 105 LLRGNHESR 113 (285)
T ss_pred EEecccchH
Confidence 899999964
No 97
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=88.06 E-value=8 Score=38.68 Aligned_cols=93 Identities=14% Similarity=0.236 Sum_probs=50.2
Q ss_pred cCCCCCCcccEeeeCCC---CCeEEEEEEeCCCCCCCccEEEEeec-CCCCccccccceEEeccccCCCCCcc-----cc
Q 016427 163 FTNPNAPVYPRLAQGKV---WNEMTVTWTSGYGINEAEPFVEWGPK-GGDRTYSPAGTLTFGRGSMCGAPART-----VG 233 (390)
Q Consensus 163 f~~~~~P~qvhLa~~~d---~~~m~VtW~T~~~~~~~~~~V~yG~~-~~~~~~~~a~t~Ty~~~~mcg~PA~t-----~g 233 (390)
..-|.-|+-..+--.+. =++++|.|....+ ......-|... .+... ........++|.+|-+. +.
T Consensus 169 ~~~P~LP~d~~Ik~f~~lrtC~SvTIAW~~s~d--~~~kYCvy~~~~~~~~~----~~~~~~~~n~C~~~~sr~k~e~v~ 242 (300)
T PF10179_consen 169 QPYPQLPDDTSIKEFNKLRTCNSVTIAWLGSPD--RSIKYCVYRREEHSNYQ----ERSVSRMPNQCLGPESRKKSEKVL 242 (300)
T ss_pred CCCCCCCCCCceeEEcCCcccceEEEEEecCCC--CCceEEEEEEEecCchh----hhhhcccCccCCCCCccccceEEE
Confidence 34577888888765542 3899999986542 11133334432 22110 00112334567755421 11
Q ss_pred ---ccCCc----e---EEEEEeCCCCCCCEEEEEEcee
Q 016427 234 ---WRDPG----Y---IHTGFLRELWPNAMYTYKLGHR 261 (390)
Q Consensus 234 ---~rdpg----~---iH~a~LtgL~PgT~Y~YrVG~~ 261 (390)
++.+. . +=..+|.||+||+.|-..|-..
T Consensus 243 Ck~~~~~n~~~~~~~~v~tetI~~L~PG~~Yl~dV~~~ 280 (300)
T PF10179_consen 243 CKYFHSPNSSEDPQRAVTTETIKGLKPGTTYLFDVYVN 280 (300)
T ss_pred EEEEcCCccccccccccceeecccCCCCcEEEEEEEEe
Confidence 12211 1 2233799999999998888765
No 98
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=87.40 E-value=8.4 Score=44.93 Aligned_cols=128 Identities=15% Similarity=0.144 Sum_probs=75.3
Q ss_pred eceEEEEEEeecc--cceEEEEEecCCCCceEEEeeccee-cCCCCCCcccEeeeCCCCCeEEEEEEeCCCCCCCccEEE
Q 016427 125 GKGSLKLQLINQR--SDFSFVLFTNGLLNPKVVAVSNKVT-FTNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVE 201 (390)
Q Consensus 125 G~gsl~~~L~n~R--~~~~f~~f~~~~~~p~l~a~S~~v~-f~~~~~P~qvhLa~~~d~~~m~VtW~T~~~~~~~~~~V~ 201 (390)
+.| +.+.+.|.- .-|.|++-.-+.--. =..|.++. -+.+..|.+ .-+..-.+.++.|+|....- ...++..
T Consensus 480 s~g-~~~tv~nl~p~t~Y~~rv~A~n~~g~--g~sS~pLkV~t~pEgp~~-~~a~ats~~ti~v~WepP~~--~n~~I~~ 553 (1381)
T KOG4221|consen 480 SPG-IQVTVQNLSPLTMYFFRVRAKNEAGS--GESSAPLKVTTQPEGPVQ-LQAYATSPTTILVTWEPPPF--GNGPITG 553 (1381)
T ss_pred CCc-eEEEeeecccceeEEEEEeccCcccC--CccCCceEEecCCCCCcc-ccccccCcceEEEEecCCCC--CCCCceE
Confidence 555 666666655 457777754322100 00111111 134556777 55566678999999998763 2234444
Q ss_pred Eee--cCCCCccccccceEEeccccCCCCCccccccCCceEEEEEeCCCCCCCEEEEEEceecCCCCccccceEEEEeCC
Q 016427 202 WGP--KGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (390)
Q Consensus 202 yG~--~~~~~~~~~a~t~Ty~~~~mcg~PA~t~g~rdpg~iH~a~LtgL~PgT~Y~YrVG~~~~dg~~~wS~~~sF~T~P 279 (390)
|.. ..++ ..+-..++ .--++.+|.||+|.|.|.|||...+..|.+.-|+..+|+|..
T Consensus 554 yk~~ys~~~----~~~~~~~~-----------------~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V~Tls 612 (1381)
T KOG4221|consen 554 YKLFYSEDD----TGKELRVE-----------------NNATEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITVRTLS 612 (1381)
T ss_pred EEEEEEcCC----CCceEEEe-----------------cCccEEEeecCCCccceEEEEEEecCCCCCCCCCceEEEecc
Confidence 532 1110 00011111 123567889999999999999988777767778889999873
No 99
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=86.94 E-value=0.9 Score=40.71 Aligned_cols=54 Identities=7% Similarity=0.070 Sum_probs=36.6
Q ss_pred HHHHHHHHHcCCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEEeecCcc
Q 016427 315 NTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIARFVII 370 (390)
Q Consensus 315 ~T~~~l~~~~~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymva~GNHE 370 (390)
..++.+.++.+.+|++|.+||+--.+.....|..|++. ....-+|.+.+-||||
T Consensus 15 ~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~g--~~~~pipTyf~ggn~~ 68 (150)
T cd07380 15 EKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKDG--SKKVPIPTYFLGGNNP 68 (150)
T ss_pred HHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhcC--CccCCCCEEEECCCCC
Confidence 44455555557899999999997554433334444432 2356789999999998
No 100
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=86.64 E-value=2.3 Score=42.52 Aligned_cols=66 Identities=15% Similarity=0.138 Sum_probs=37.0
Q ss_pred EEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcCCc----------cEEEEeCccccccCCchhHHHHHHhhhhHhc
Q 016427 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNI----------DIVFHIGDICYANGYISQWDQFTAQIEPIAS 358 (390)
Q Consensus 289 f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~----------DfVlhiGDisYa~G~~~~WD~F~~~iepias 358 (390)
+.++||++.. ...+.++++..+-+ .-+++.||++ ++|..+ -+-+..+..+..
T Consensus 50 ~~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyV-DRGp~s--~evl~ll~~lk~ 111 (311)
T cd07419 50 IKIFGDIHGQ---------------FGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYV-DRGSNS--LETICLLLALKV 111 (311)
T ss_pred EEEEEeccCC---------------HHHHHHHHHHcCCCcccccCCCcCceEEEECCcc-CCCCCh--HHHHHHHHHhhh
Confidence 7889999743 24456666654311 1367899999 445432 122222222222
Q ss_pred cc--eEEEeecCcccc
Q 016427 359 TV--PYMIARFVIIHY 372 (390)
Q Consensus 359 ~v--Pymva~GNHE~~ 372 (390)
.. -+....||||..
T Consensus 112 ~~p~~v~lLRGNHE~~ 127 (311)
T cd07419 112 KYPNQIHLIRGNHEDR 127 (311)
T ss_pred cCCCcEEEeccccchH
Confidence 22 356799999964
No 101
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=86.46 E-value=2.2 Score=42.30 Aligned_cols=67 Identities=15% Similarity=0.094 Sum_probs=38.8
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEEEEeCccccccCCchhHHHHHHhhhhHhccce--EE
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVP--YM 363 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vP--ym 363 (390)
.++++||++.. ...+.++.+.. +..+-+++.||++. +|..+. +-+..+..+--..| +.
T Consensus 51 ~i~viGDIHG~---------------~~~L~~l~~~~~~~~~~~~lfLGDyVD-RG~~s~--e~i~ll~~lk~~~p~~i~ 112 (293)
T cd07414 51 PLKICGDIHGQ---------------YYDLLRLFEYGGFPPESNYLFLGDYVD-RGKQSL--ETICLLLAYKIKYPENFF 112 (293)
T ss_pred ceEEEEecCCC---------------HHHHHHHHHhcCCCCcceEEEEeeEec-CCCCcH--HHHHHHHHhhhhCCCcEE
Confidence 48999999743 24456666653 34557889999994 554321 11111111111223 66
Q ss_pred EeecCcccc
Q 016427 364 IARFVIIHY 372 (390)
Q Consensus 364 va~GNHE~~ 372 (390)
...||||..
T Consensus 113 llrGNHE~~ 121 (293)
T cd07414 113 LLRGNHECA 121 (293)
T ss_pred EEecccchh
Confidence 789999975
No 102
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=85.89 E-value=2.7 Score=41.97 Aligned_cols=66 Identities=18% Similarity=0.160 Sum_probs=39.0
Q ss_pred EEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcC--CccEEEEeCccccccCCchhHHHHHHhhhhHhccce--EEE
Q 016427 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVP--YMI 364 (390)
Q Consensus 289 f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~--~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vP--ymv 364 (390)
+.++||++.. ...+.++.++.+ ..+-+++.||++. +|..+. +-+..+-.+.-..| ++.
T Consensus 45 i~vvGDIHG~---------------~~~L~~l~~~~~~~~~~~~lfLGDyVD-RG~~s~--evl~ll~~lk~~~p~~v~l 106 (303)
T PTZ00239 45 VNVCGDIHGQ---------------FYDLQALFKEGGDIPNANYIFIGDFVD-RGYNSV--ETMEYLLCLKVKYPGNITL 106 (303)
T ss_pred EEEEEeCCCC---------------HHHHHHHHHhcCCCCCceEEEeeeEcC-CCCCHH--HHHHHHHHhhhcCCCcEEE
Confidence 8899999743 244566666542 3457889999994 554332 11222211112223 678
Q ss_pred eecCcccc
Q 016427 365 ARFVIIHY 372 (390)
Q Consensus 365 a~GNHE~~ 372 (390)
..||||..
T Consensus 107 lrGNHE~~ 114 (303)
T PTZ00239 107 LRGNHESR 114 (303)
T ss_pred EecccchH
Confidence 99999964
No 103
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=85.70 E-value=1.7 Score=50.80 Aligned_cols=79 Identities=13% Similarity=0.094 Sum_probs=40.5
Q ss_pred CCCCeEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEE-EEeCccccccCCchhHHHHHHhhhhHhcc
Q 016427 283 QDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIV-FHIGDICYANGYISQWDQFTAQIEPIAST 359 (390)
Q Consensus 283 ~~~~~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfV-lhiGDisYa~G~~~~WD~F~~~iepias~ 359 (390)
+...++++.++|++.. ..| ...+..++++. .+++.+ +..||+...... +.+.+....++ +...
T Consensus 657 ~~~~l~Il~~nD~Hg~-l~g-----------~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~g~~~~~-~ln~ 722 (1163)
T PRK09419 657 DNWELTILHTNDFHGH-LDG-----------AAKRVTKIKEVKEENPNTILVDAGDVYQGSLY-SNLLKGLPVLK-MMKE 722 (1163)
T ss_pred CceEEEEEEEeecccC-CCC-----------HHHHHHHHHHHHhhCCCeEEEecCCCCCCcch-hhhcCChHHHH-HHhC
Confidence 3456999999999832 111 11223333321 355655 559998743321 11111111222 2223
Q ss_pred ceE-EEeecCccccccC
Q 016427 360 VPY-MIARFVIIHYVAH 375 (390)
Q Consensus 360 vPy-mva~GNHE~~~~~ 375 (390)
+-| ..++||||+++..
T Consensus 723 lg~d~~~~GNHEfd~g~ 739 (1163)
T PRK09419 723 MGYDASTFGNHEFDWGP 739 (1163)
T ss_pred cCCCEEEecccccccCh
Confidence 333 5599999987654
No 104
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=85.69 E-value=2.7 Score=40.24 Aligned_cols=69 Identities=14% Similarity=0.280 Sum_probs=43.3
Q ss_pred CeEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEEEEeCcccccc-CCchhHHHHHHhhhhHh-ccce
Q 016427 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIA-STVP 361 (390)
Q Consensus 286 ~~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~-G~~~~WD~F~~~iepia-s~vP 361 (390)
..|++++.|.+... ..+++++... .++|+++.+|||+|.+ +...+=.+-. -++.+. ..+|
T Consensus 3 ~mkil~vtDlHg~~---------------~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~-~~e~l~~~~~~ 66 (226)
T COG2129 3 KMKILAVTDLHGSE---------------DSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELN-KLEALKELGIP 66 (226)
T ss_pred cceEEEEeccccch---------------HHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhh-HHHHHHhcCCe
Confidence 47899999997643 2234444332 4899999999999643 2111001000 045555 6799
Q ss_pred EEEeecCcc
Q 016427 362 YMIARFVII 370 (390)
Q Consensus 362 ymva~GNHE 370 (390)
.+.++||=|
T Consensus 67 v~avpGNcD 75 (226)
T COG2129 67 VLAVPGNCD 75 (226)
T ss_pred EEEEcCCCC
Confidence 999999955
No 105
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=85.39 E-value=2.9 Score=41.99 Aligned_cols=64 Identities=13% Similarity=0.112 Sum_probs=37.8
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcC---CccEEEEeCccccccCCchhHHHHHHhhhhHhc---c--
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK---NIDIVFHIGDICYANGYISQWDQFTAQIEPIAS---T-- 359 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~---~~DfVlhiGDisYa~G~~~~WD~F~~~iepias---~-- 359 (390)
++.++||++.. ...+.++++..+ .-|-+++.||++ ++|..+ .+.+.-+.+ .
T Consensus 61 ~~~VvGDIHG~---------------~~dL~~ll~~~g~~~~~~~ylFLGDyV-DRG~~S-----~Evl~ll~~lki~~p 119 (316)
T cd07417 61 KITVCGDTHGQ---------------FYDLLNIFELNGLPSETNPYLFNGDFV-DRGSFS-----VEVILTLFAFKLLYP 119 (316)
T ss_pred eeEEeecccCC---------------HHHHHHHHHhcCCCCccCeEEEEeeEe-cCCCCh-----HHHHHHHHHhhhccC
Confidence 68999999743 244566666432 235788899999 455432 122221111 1
Q ss_pred ceEEEeecCcccc
Q 016427 360 VPYMIARFVIIHY 372 (390)
Q Consensus 360 vPymva~GNHE~~ 372 (390)
-=+....||||..
T Consensus 120 ~~v~lLRGNHE~~ 132 (316)
T cd07417 120 NHFHLNRGNHETD 132 (316)
T ss_pred CceEEEeeccchH
Confidence 1245689999963
No 106
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=83.92 E-value=3.1 Score=41.38 Aligned_cols=66 Identities=14% Similarity=0.050 Sum_probs=38.0
Q ss_pred EEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEEEEeCccccccCCchhHHHHHHhhhh--HhccceEEE
Q 016427 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEP--IASTVPYMI 364 (390)
Q Consensus 289 f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~G~~~~WD~F~~~iep--ias~vPymv 364 (390)
+.++||++.. ...+.++.++. +..+-+++.||++. +|..+. +-+..+-. +...--+..
T Consensus 54 ~~ViGDIHG~---------------~~~L~~l~~~~~~~~~~~~lfLGDyVD-RG~~s~--evl~ll~~lk~~~p~~v~l 115 (294)
T PTZ00244 54 VRVCGDTHGQ---------------YYDLLRIFEKCGFPPYSNYLFLGDYVD-RGKHSV--ETITLQFCYKIVYPENFFL 115 (294)
T ss_pred ceeeccCCCC---------------HHHHHHHHHHcCCCCcccEEEeeeEec-CCCCHH--HHHHHHHHHhhccCCeEEE
Confidence 7889999743 24456666653 34455778999994 454321 11111111 112235778
Q ss_pred eecCcccc
Q 016427 365 ARFVIIHY 372 (390)
Q Consensus 365 a~GNHE~~ 372 (390)
..||||..
T Consensus 116 lrGNHE~~ 123 (294)
T PTZ00244 116 LRGNHECA 123 (294)
T ss_pred EecccchH
Confidence 99999964
No 107
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=83.09 E-value=2.1 Score=41.27 Aligned_cols=71 Identities=13% Similarity=0.069 Sum_probs=46.2
Q ss_pred EEecCCCCCCCCCCcccccccCcHHHHHHHHHHc-CCccEEEEeCccccc-cCCchhHHHHHHhh----hhHhcc-ceEE
Q 016427 291 IFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL-KNIDIVFHIGDICYA-NGYISQWDQFTAQI----EPIAST-VPYM 363 (390)
Q Consensus 291 vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~-~~~DfVlhiGDisYa-~G~~~~WD~F~~~i----epias~-vPym 363 (390)
++.|++.+.. .|.-...+...+++. .+.|.++.+|||... -|+. .|.++.+++ .-++.+ +|.+
T Consensus 2 FISDlHL~~~---------~p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~~-~~~~~~~~V~~~l~~~a~~G~~v~ 71 (237)
T COG2908 2 FISDLHLGPK---------RPALTAFFLDFLREEAAQADALYILGDIFDGWIGDD-EPPQLHRQVAQKLLRLARKGTRVY 71 (237)
T ss_pred eeeccccCCC---------CcHHHHHHHHHHHhccccCcEEEEechhhhhhhcCC-cccHHHHHHHHHHHHHHhcCCeEE
Confidence 4677776521 232234445555543 467999999999864 2222 577777654 345555 9999
Q ss_pred EeecCccc
Q 016427 364 IARFVIIH 371 (390)
Q Consensus 364 va~GNHE~ 371 (390)
..+||||.
T Consensus 72 ~i~GN~Df 79 (237)
T COG2908 72 YIHGNHDF 79 (237)
T ss_pred EecCchHH
Confidence 99999993
No 108
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=81.70 E-value=4.5 Score=40.74 Aligned_cols=67 Identities=13% Similarity=0.039 Sum_probs=38.2
Q ss_pred EEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc--CCccEEEEeCccccccCCchhHHHHHHhhhhHhccc--eEE
Q 016427 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV--PYM 363 (390)
Q Consensus 288 ~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~v--Pym 363 (390)
+++++||++.. ...+.++.+.. +..+-.++.||++. +|..+. +-+..+..+--.. -++
T Consensus 60 ~i~vvGDIHG~---------------~~dL~~l~~~~g~~~~~~ylfLGDyVD-RG~~s~--evl~ll~~lki~~p~~v~ 121 (320)
T PTZ00480 60 PLKICGDVHGQ---------------YFDLLRLFEYGGYPPESNYLFLGDYVD-RGKQSL--ETICLLLAYKIKYPENFF 121 (320)
T ss_pred CeEEEeecccC---------------HHHHHHHHHhcCCCCcceEEEeceecC-CCCCcH--HHHHHHHHhcccCCCceE
Confidence 48999999743 23455666643 33456778999995 453321 1111111111122 367
Q ss_pred EeecCcccc
Q 016427 364 IARFVIIHY 372 (390)
Q Consensus 364 va~GNHE~~ 372 (390)
...||||..
T Consensus 122 llRGNHE~~ 130 (320)
T PTZ00480 122 LLRGNHECA 130 (320)
T ss_pred EEecccchh
Confidence 899999974
No 109
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=81.11 E-value=3.9 Score=40.10 Aligned_cols=82 Identities=11% Similarity=-0.051 Sum_probs=38.1
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc-------CCccEEEEeCccccccCCchhHHHHHHhhhhHhcc
Q 016427 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL-------KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~-------~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~ 359 (390)
++++...|++..-.. + ..+.+.+.-+..++++. ...-+++..||+-.... .+.+.+--..++ ++..
T Consensus 1 ltIl~tnD~Hg~l~~----~-~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~-~~~~~~g~~~~~-~~n~ 73 (285)
T cd07405 1 ITILHTNDHHGHFWP----N-GTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVP-ESDLQDAEPDFR-GMNL 73 (285)
T ss_pred CEEEEEccccccccc----C-CCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCch-hHHhcCcchHHH-HHHh
Confidence 468889999754211 0 01122222233333332 22348999999863221 111111011111 2222
Q ss_pred ce-EEEeecCccccccC
Q 016427 360 VP-YMIARFVIIHYVAH 375 (390)
Q Consensus 360 vP-ymva~GNHE~~~~~ 375 (390)
+- =..++||||+++..
T Consensus 74 ~g~Da~~~GNHEfD~G~ 90 (285)
T cd07405 74 VGYDAMAVGNHEFDNPL 90 (285)
T ss_pred hCCcEEeecccccccCH
Confidence 22 23467999998753
No 110
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=79.44 E-value=3.3 Score=43.99 Aligned_cols=96 Identities=10% Similarity=0.095 Sum_probs=48.0
Q ss_pred eCCCCCCCCCeEEEEEecCCCCCCCCCCcccccc--cCcHHHHHHHHHHc---CCccEEEEeCccccccCCchhHHHHHH
Q 016427 277 ASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQ--RGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTA 351 (390)
Q Consensus 277 T~P~~g~~~~~~f~vfGDmG~~~~dgs~~~~~~q--p~s~~T~~~l~~~~---~~~DfVlhiGDisYa~G~~~~WD~F~~ 351 (390)
..........++|+...|++..-. ...+.... .+...-+..++++. ..-.++++.||+--.+..... ..-.+
T Consensus 17 ~~~~~~~~~~l~ilhtnD~H~~l~--~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~-~~~g~ 93 (517)
T COG0737 17 AAAAAAETVKLTILHTNDLHGHLE--PYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDY-LTKGE 93 (517)
T ss_pred ccccccCceeEEEEEeccccccce--eccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccccc-ccCCC
Confidence 333333445689999999976432 00111001 11122223333321 235689999999854332211 11111
Q ss_pred hhhhHhccceE-EEeecCccccccC
Q 016427 352 QIEPIASTVPY-MIARFVIIHYVAH 375 (390)
Q Consensus 352 ~iepias~vPy-mva~GNHE~~~~~ 375 (390)
.+-.++..+.| ..++||||+++.+
T Consensus 94 ~~~~~mN~m~yDa~tiGNHEFd~g~ 118 (517)
T COG0737 94 PTVDLLNALGYDAMTLGNHEFDYGL 118 (517)
T ss_pred hHHHHHhhcCCcEEeecccccccCH
Confidence 22223344444 4689999999864
No 111
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=79.32 E-value=2.7 Score=44.41 Aligned_cols=48 Identities=15% Similarity=0.327 Sum_probs=32.0
Q ss_pred CCccEEEEeCccccccCCchhHHHHHHhh---------------------h-----hHhccceEEEeecCccccc
Q 016427 325 KNIDIVFHIGDICYANGYISQWDQFTAQI---------------------E-----PIASTVPYMIARFVIIHYV 373 (390)
Q Consensus 325 ~~~DfVlhiGDisYa~G~~~~WD~F~~~i---------------------e-----pias~vPymva~GNHE~~~ 373 (390)
..+||+|-.||.+..+-|. +-+.|.+-+ . -+...+||.-+.||||.-.
T Consensus 98 ~p~df~is~GD~~nn~~~n-ElrWyidvldG~~I~p~SG~~~~~e~v~~~~p~~a~GL~~~iPWY~v~GNHD~~~ 171 (492)
T TIGR03768 98 DRFDFGISLGDACNSTQYN-ELRWYIDVLDGKPITPSSGAHAGADTIDYQKPFQAAGLDKSIPWYQVLGNHDHFW 171 (492)
T ss_pred CCceEEEeccccccchhHH-HHHHHHHHhcCCeeccCCCCCCCccCCCCCCcccccccCCCCceEEeecCCcccc
Confidence 5799999999999765332 223333221 1 1334699999999999653
No 112
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=78.85 E-value=4.7 Score=45.58 Aligned_cols=99 Identities=14% Similarity=0.076 Sum_probs=47.6
Q ss_pred EEeCCCCCCCCCeEEEEEecCCCCCCCCCCcccc--cccCcHHHHHHHHHHc--CC-ccEEEEeCccccccCCc---hhH
Q 016427 275 FKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNN--FQRGSLNTTRQLIQDL--KN-IDIVFHIGDICYANGYI---SQW 346 (390)
Q Consensus 275 F~T~P~~g~~~~~~f~vfGDmG~~~~dgs~~~~~--~qp~s~~T~~~l~~~~--~~-~DfVlhiGDisYa~G~~---~~W 346 (390)
-.+.|..+....+|++...|++..-. .+.-|.. ...+.+.-+..++++. ++ --+++++||+.-..-.. ...
T Consensus 104 ~~~~~~~~~~~~LtIL~TnDiHg~l~-~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~ 182 (814)
T PRK11907 104 ETSKPVEGQTVDVRILSTTDLHTNLV-NYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIV 182 (814)
T ss_pred ccCCCccCCceEEEEEEEEeecCCcc-cccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhc
Confidence 34445555555699999999986421 1111111 0111222333444432 22 24899999997432111 000
Q ss_pred HHHH----HhhhhHhccceE-EEeecCcccccc
Q 016427 347 DQFT----AQIEPIASTVPY-MIARFVIIHYVA 374 (390)
Q Consensus 347 D~F~----~~iepias~vPy-mva~GNHE~~~~ 374 (390)
+... +.+-.++..+-| ..++||||+++.
T Consensus 183 ~~~~~g~~~P~i~amN~LGyDA~tLGNHEFDyG 215 (814)
T PRK11907 183 DPVEEGEQHPMYAALEALGFDAGTLGNHEFNYG 215 (814)
T ss_pred cccccCcchHHHHHHhccCCCEEEechhhcccC
Confidence 0000 112222333333 357999998875
No 113
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=78.44 E-value=4.8 Score=39.21 Aligned_cols=71 Identities=20% Similarity=0.202 Sum_probs=44.5
Q ss_pred eEEEEEecC-CCCCCCCCCcccccccCcHHHHHHHHHHcCCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEEe
Q 016427 287 QQVIIFGDM-GKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (390)
Q Consensus 287 ~~f~vfGDm-G~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymva 365 (390)
.|++++||+ |+.+++. -.+-+.+|.++ -++|||+..|-.+ +.|..--|+.|.+.++. -+-+ ++
T Consensus 1 mriLfiGDvvGk~Gr~~----------v~~~Lp~lk~k-yk~dfvI~N~ENa-a~G~Git~k~y~~l~~~---G~dv-iT 64 (266)
T COG1692 1 MRILFIGDVVGKPGRKA----------VKEHLPQLKSK-YKIDFVIVNGENA-AGGFGITEKIYKELLEA---GADV-IT 64 (266)
T ss_pred CeEEEEecccCcchHHH----------HHHHhHHHHHh-hcCcEEEEcCccc-cCCcCCCHHHHHHHHHh---CCCE-Ee
Confidence 379999999 4443210 01122333332 4689999999998 67776667777766543 2333 58
Q ss_pred ecCccccc
Q 016427 366 RFVIIHYV 373 (390)
Q Consensus 366 ~GNHE~~~ 373 (390)
.|||=.+.
T Consensus 65 ~GNH~wd~ 72 (266)
T COG1692 65 LGNHTWDQ 72 (266)
T ss_pred cccccccc
Confidence 89997654
No 114
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=78.20 E-value=3.8 Score=43.99 Aligned_cols=82 Identities=15% Similarity=0.042 Sum_probs=39.9
Q ss_pred CCeEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc-------CCccEEEEeCccccccCCchhHHHHHH--hhhh
Q 016427 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL-------KNIDIVFHIGDICYANGYISQWDQFTA--QIEP 355 (390)
Q Consensus 285 ~~~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~-------~~~DfVlhiGDisYa~G~~~~WD~F~~--~iep 355 (390)
..++|+.+.|++..-.. ..+.. .| ...+..++++. ...-++++.||+--.. . +..++. .+-.
T Consensus 33 ~~ltil~tnD~Hg~~~~--~~~~~--~G-~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs-~---~s~~~~g~~~i~ 103 (551)
T PRK09558 33 YKITILHTNDHHGHFWR--NEYGE--YG-LAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGV-P---ESDLQDAEPDFR 103 (551)
T ss_pred eEEEEEEecccCCCccc--cccCC--cc-HHHHHHHHHHHHHHhhccCCCEEEEcCCccccce-E---hhhhcCCchhHH
Confidence 45899999999864311 00100 02 22223333321 1234899999985321 1 122221 1111
Q ss_pred HhccceE-EEeecCccccccC
Q 016427 356 IASTVPY-MIARFVIIHYVAH 375 (390)
Q Consensus 356 ias~vPy-mva~GNHE~~~~~ 375 (390)
++..+-| ..++||||+++..
T Consensus 104 ~mN~~g~Da~tlGNHEFD~G~ 124 (551)
T PRK09558 104 GMNLIGYDAMAVGNHEFDNPL 124 (551)
T ss_pred HHhcCCCCEEcccccccCcCH
Confidence 2222222 3467999998753
No 115
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=78.13 E-value=6.1 Score=38.58 Aligned_cols=59 Identities=12% Similarity=0.056 Sum_probs=28.3
Q ss_pred HHHHHHHHHHc--CCcc-EEEEeCccccccCCchhHHHHHHhhhhHh-ccceEEEeecCcccccc
Q 016427 314 LNTTRQLIQDL--KNID-IVFHIGDICYANGYISQWDQFTAQIEPIA-STVPYMIARFVIIHYVA 374 (390)
Q Consensus 314 ~~T~~~l~~~~--~~~D-fVlhiGDisYa~G~~~~WD~F~~~iepia-s~vPymva~GNHE~~~~ 374 (390)
...+..++++. .+.+ +++..||+........ +.+--..++.+- ..+-. .++||||+++.
T Consensus 34 ~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~-~~~g~~~~~~ln~~g~D~-~~lGNHefd~G 96 (281)
T cd07409 34 FARVATLVKELRAENPNVLFLNAGDAFQGTLWYT-LYKGNADAEFMNLLGYDA-MTLGNHEFDDG 96 (281)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhh-hcCChHHHHHHHhcCCCE-EEeccccccCC
Confidence 33344444443 2344 7788999875432211 100001112111 12444 46799999874
No 116
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=77.29 E-value=8.8 Score=35.14 Aligned_cols=51 Identities=10% Similarity=0.061 Sum_probs=32.4
Q ss_pred HHHHHHcCCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEEeecCccccc
Q 016427 318 RQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIARFVIIHYV 373 (390)
Q Consensus 318 ~~l~~~~~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymva~GNHE~~~ 373 (390)
....+-+..=|.+.|.||++-..... .....-.+-+-.++ ..++||||-.-
T Consensus 37 ~N~nntv~p~D~lwhLGDl~~~~n~~---~~a~~IlerLnGrk--hlv~GNhDk~~ 87 (186)
T COG4186 37 SNWNNTVGPDDVLWHLGDLSSGANRE---RAAGLILERLNGRK--HLVPGNHDKCH 87 (186)
T ss_pred HhHHhcCCccceEEEecccccccchh---hHHHHHHHHcCCcE--EEeeCCCCCCc
Confidence 33333345678999999999654332 23333444555555 78999999664
No 117
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=73.60 E-value=8.3 Score=41.52 Aligned_cols=46 Identities=13% Similarity=0.011 Sum_probs=24.0
Q ss_pred cEEEEeCccccccCCchhHHHHHHhhhhHhccce-EEEeecCccccccC
Q 016427 328 DIVFHIGDICYANGYISQWDQFTAQIEPIASTVP-YMIARFVIIHYVAH 375 (390)
Q Consensus 328 DfVlhiGDisYa~G~~~~WD~F~~~iepias~vP-ymva~GNHE~~~~~ 375 (390)
-++++.||.....-+ +.+..--..++ ++..+- =..++||||+++..
T Consensus 51 ~l~ldaGD~~~gs~~-~~~~~g~~~i~-~~N~~g~Da~~lGNHEFd~G~ 97 (550)
T TIGR01530 51 ALVLHAGDAIIGTLY-FTLFGGRADAA-LMNAAGFDFFTLGNHEFDAGN 97 (550)
T ss_pred eEEEECCCCCCCccc-hhhcCCHHHHH-HHhccCCCEEEeccccccCCH
Confidence 489999999743211 11111001222 222222 24589999998753
No 118
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=72.32 E-value=9.8 Score=37.99 Aligned_cols=12 Identities=17% Similarity=-0.247 Sum_probs=9.5
Q ss_pred EeecCccccccC
Q 016427 364 IARFVIIHYVAH 375 (390)
Q Consensus 364 va~GNHE~~~~~ 375 (390)
.++||||+++..
T Consensus 83 ~tlGNHEFD~G~ 94 (313)
T cd08162 83 IALGNHEFDLGT 94 (313)
T ss_pred EeccccccccCH
Confidence 479999988753
No 119
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=69.28 E-value=7 Score=36.58 Aligned_cols=47 Identities=23% Similarity=0.152 Sum_probs=27.6
Q ss_pred CCccEEEEeCccccccCCchhHHHHHHhhhhHhccceEEEeecCcccccc
Q 016427 325 KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIARFVIIHYVA 374 (390)
Q Consensus 325 ~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPymva~GNHE~~~~ 374 (390)
..=|.|+..|||+.+..-.. -..=|+.|..+ .-+-|| +.||||+-+.
T Consensus 42 ~~eDiVllpGDiSWaM~l~e-a~~Dl~~i~~L-PG~K~m-~rGNHDYWw~ 88 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEE-AEEDLRFIGDL-PGTKYM-IRGNHDYWWS 88 (230)
T ss_pred ChhhEEEecccchhheechh-hhhhhhhhhcC-CCcEEE-EecCCccccc
Confidence 45589999999999864321 11112222221 123354 8999997653
No 120
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=65.94 E-value=5.3 Score=39.31 Aligned_cols=86 Identities=16% Similarity=0.143 Sum_probs=41.3
Q ss_pred CeEEEEEecCCCCCCCCCCccccc---ccCcHHHHHHHHHHc--CCcc-EEEEeCccccccCCchhHH-HHHHhhhhHhc
Q 016427 286 LQQVIIFGDMGKDEADGSNEYNNF---QRGSLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQWD-QFTAQIEPIAS 358 (390)
Q Consensus 286 ~~~f~vfGDmG~~~~dgs~~~~~~---qp~s~~T~~~l~~~~--~~~D-fVlhiGDisYa~G~~~~WD-~F~~~iepias 358 (390)
.++++...|++..-. +.....+. ..+-...++++.+.. .+.+ +++++||+---..... .. .-.+.+-.++.
T Consensus 5 ~ltILhtnD~Hg~l~-~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~-~~~~~g~~~~~~mN 82 (282)
T cd07407 5 DINFLHTTDTHGWLG-GHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSD-ASPPPGSYSNPIFR 82 (282)
T ss_pred eEEEEEEcccccCCc-CcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeecee-eecCCChHHHHHHH
Confidence 389999999975321 11000000 001112223332211 2333 7889999874332110 00 00123344555
Q ss_pred cceE-EEeecCccccc
Q 016427 359 TVPY-MIARFVIIHYV 373 (390)
Q Consensus 359 ~vPy-mva~GNHE~~~ 373 (390)
.++| ..++||||+++
T Consensus 83 ~mgyDa~tlGNHEFd~ 98 (282)
T cd07407 83 MMPYDLLTIGNHELYN 98 (282)
T ss_pred hcCCcEEeecccccCc
Confidence 6666 36799999974
No 121
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=65.45 E-value=17 Score=35.22 Aligned_cols=84 Identities=14% Similarity=0.175 Sum_probs=45.6
Q ss_pred EEEEEecCCCCCCC-----CCCcccccccC-cHHHHHHHHHHcCCccEEEEeCccccccCC--chhHHHHHHhhhhHhcc
Q 016427 288 QVIIFGDMGKDEAD-----GSNEYNNFQRG-SLNTTRQLIQDLKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIAST 359 (390)
Q Consensus 288 ~f~vfGDmG~~~~d-----gs~~~~~~qp~-s~~T~~~l~~~~~~~DfVlhiGDisYa~G~--~~~WD~F~~~iepias~ 359 (390)
+.+++.|.+..--. |-+- ..+|-. -...++++++. .+++-++..||+=-+-+. ...|+.--..++-+..+
T Consensus 21 ~~lVvADlHlG~e~~~~r~Gi~l-P~~~~~~~~~~l~~ii~~-~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 21 RTLVVADLHLGYEESLARRGINL-PRYQTDRILKRLDRIIER-YGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred cEEEEEecccchhHHHHhcCccc-CchhHHHHHHHHHHHHHh-cCCCEEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 57999999875210 1000 011110 11233333432 689999999999765433 23344322233333333
Q ss_pred ceEEEeecCcccccc
Q 016427 360 VPYMIARFVIIHYVA 374 (390)
Q Consensus 360 vPymva~GNHE~~~~ 374 (390)
=++++.||||-+-.
T Consensus 99 -evi~i~GNHD~~i~ 112 (235)
T COG1407 99 -EVIIIRGNHDNGIE 112 (235)
T ss_pred -cEEEEeccCCCccc
Confidence 59999999997654
No 122
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=60.74 E-value=13 Score=39.55 Aligned_cols=14 Identities=7% Similarity=-0.107 Sum_probs=12.5
Q ss_pred cceEEEeecCcccc
Q 016427 359 TVPYMIARFVIIHY 372 (390)
Q Consensus 359 ~vPymva~GNHE~~ 372 (390)
.+||.-+.||||.-
T Consensus 183 ~~Pwy~v~GNHD~~ 196 (496)
T TIGR03767 183 DLPWYSVFGNHDDL 196 (496)
T ss_pred CCceeeeccCCccc
Confidence 59999999999954
No 123
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=59.72 E-value=22 Score=39.00 Aligned_cols=86 Identities=13% Similarity=0.147 Sum_probs=41.0
Q ss_pred eEEEEEecCCCCCCCCCCcccc--cccCcHHHHHHHHHHc--C-CccEEEEeCccccccCCchhHHHH--H--HhhhhH-
Q 016427 287 QQVIIFGDMGKDEADGSNEYNN--FQRGSLNTTRQLIQDL--K-NIDIVFHIGDICYANGYISQWDQF--T--AQIEPI- 356 (390)
Q Consensus 287 ~~f~vfGDmG~~~~dgs~~~~~--~qp~s~~T~~~l~~~~--~-~~DfVlhiGDisYa~G~~~~WD~F--~--~~iepi- 356 (390)
+|++...|++..-. ...-|.. ...+.+.-+..++++. + .--+++..||+.-..-.. .|... + .+..|+
T Consensus 3 l~Il~TnDlH~~l~-~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~-~~~~~~~~~~~~~~p~~ 80 (626)
T TIGR01390 3 LRIVETTDLHTNLM-DYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLG-DYMAAQGLKAGQMHPVY 80 (626)
T ss_pred EEEEEEcCCccCcc-CCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccch-hhhhhccccCCCcChHH
Confidence 78999999976421 1111111 0111223334444432 1 234899999987433221 11110 0 012232
Q ss_pred --hccceE-EEeecCcccccc
Q 016427 357 --ASTVPY-MIARFVIIHYVA 374 (390)
Q Consensus 357 --as~vPy-mva~GNHE~~~~ 374 (390)
+..+.| ..++||||+++.
T Consensus 81 ~~mN~lgyDa~tlGNHEFd~G 101 (626)
T TIGR01390 81 KAMNLLKYDVGNLGNHEFNYG 101 (626)
T ss_pred HHHhhcCccEEeccccccccc
Confidence 333333 357999998864
No 124
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=57.66 E-value=15 Score=35.86 Aligned_cols=47 Identities=13% Similarity=0.067 Sum_probs=31.0
Q ss_pred CccEEEEeCccccccCC-------------------chhHHHHHHhhhhHhccceEEEeecCcccc
Q 016427 326 NIDIVFHIGDICYANGY-------------------ISQWDQFTAQIEPIASTVPYMIARFVIIHY 372 (390)
Q Consensus 326 ~~DfVlhiGDisYa~G~-------------------~~~WD~F~~~iepias~vPymva~GNHE~~ 372 (390)
++.-++.+||.....+. ..+.+++-+.+..+++.+|+.+.|||||--
T Consensus 42 ~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~ 107 (257)
T cd07387 42 SIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQLASSVPVDLMPGEFDPA 107 (257)
T ss_pred ceEEEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHhhhcCCeEEECCCCCCcc
Confidence 34468999999864321 122333334445567899999999999943
No 125
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=55.84 E-value=45 Score=37.73 Aligned_cols=53 Identities=15% Similarity=0.189 Sum_probs=28.2
Q ss_pred CeEEEEEecCCCCCCCCCCcccc--cccCcHHHHHHHHHHc--CC-ccEEEEeCccccc
Q 016427 286 LQQVIIFGDMGKDEADGSNEYNN--FQRGSLNTTRQLIQDL--KN-IDIVFHIGDICYA 339 (390)
Q Consensus 286 ~~~f~vfGDmG~~~~dgs~~~~~--~qp~s~~T~~~l~~~~--~~-~DfVlhiGDisYa 339 (390)
.++|+...|++..-. .++.|.. ...+.+.-+..++++. ++ --++++.||+.-.
T Consensus 39 ~L~IL~TnDiHg~l~-~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqG 96 (780)
T PRK09418 39 NLRILETSDIHVNLM-NYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQG 96 (780)
T ss_pred EEEEEEEeecCCCCc-CcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCC
Confidence 589999999986532 1111111 0112233344444442 22 2489999999743
No 126
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=55.77 E-value=1.7e+02 Score=34.26 Aligned_cols=132 Identities=14% Similarity=0.153 Sum_probs=76.6
Q ss_pred eEEEEEEeeccc--ceEEEEEecCCCCceEEEeecceecCCCCCCcccEeeeCCCCCeEEEEEEeCCCCCCCccEEEEee
Q 016427 127 GSLKLQLINQRS--DFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGP 204 (390)
Q Consensus 127 gsl~~~L~n~R~--~~~f~~f~~~~~~p~l~a~S~~v~f~~~~~P~qvhLa~~~d~~~m~VtW~T~~~~~~~~~~V~yG~ 204 (390)
|-|.++=+.++. .|.++.=+. .+ .+=|..+.+--..|.+|.++|+.=.. .+..+++|.-+.. .-.|+..|-.
T Consensus 577 g~L~i~nv~l~~~G~Y~C~aqT~-~D--s~s~~A~l~V~gpPgpP~~v~~~~i~-~t~~~lsW~~g~d--n~SpI~~Y~i 650 (1051)
T KOG3513|consen 577 GRLTIANVSLEDSGKYTCVAQTA-LD--SASARADLLVRGPPGPPPDVHVDDIS-DTTARLSWSPGSD--NNSPIEKYTI 650 (1051)
T ss_pred cceEEEeeccccCceEEEEEEEe-ec--chhcccceEEecCCCCCCceeEeeec-cceEEEEeecCCC--CCCCceEEeE
Confidence 446666555664 466665442 11 11223333434567788888875444 4899999998875 3356878876
Q ss_pred cCCCC----ccccccceEEeccccCCCCCccccccCCceEEEEEeCCCCCCCEEEEEEceecCCCCcccc-ceEEEEeCC
Q 016427 205 KGGDR----TYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWS-SEYQFKASP 279 (390)
Q Consensus 205 ~~~~~----~~~~a~t~Ty~~~~mcg~PA~t~g~rdpg~iH~a~LtgL~PgT~Y~YrVG~~~~dg~~~wS-~~~sF~T~P 279 (390)
..... |..++ +. |. .+.|- ++++..+|.|-..|.+||..-+.-|.+.-| +.-..+|.+
T Consensus 651 q~rt~~~~~W~~v~-~v----------p~-----~~~~~-~sa~vv~L~Pwv~YeFRV~AvN~iG~gePS~pS~~~rT~e 713 (1051)
T KOG3513|consen 651 QFRTPFPGKWKAVT-TV----------PG-----NITGD-ESATVVNLSPWVEYEFRVVAVNSIGIGEPSPPSEKVRTPE 713 (1051)
T ss_pred EecCCCCCcceEee-EC----------CC-----cccCc-cceeEEccCCCcceEEEEEEEcccccCCCCCCccceecCC
Confidence 54322 22111 11 11 12344 689999999999999999876533322222 223467766
Q ss_pred CC
Q 016427 280 YP 281 (390)
Q Consensus 280 ~~ 281 (390)
+.
T Consensus 714 a~ 715 (1051)
T KOG3513|consen 714 AA 715 (1051)
T ss_pred CC
Confidence 53
No 127
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=51.78 E-value=47 Score=36.69 Aligned_cols=88 Identities=11% Similarity=0.055 Sum_probs=42.1
Q ss_pred CCeEEEEEecCCCCCCCCCCcccc--cccCcHHHHHHHHHHc--C-CccEEEEeCccccccCCchhHHHH--H-----Hh
Q 016427 285 SLQQVIIFGDMGKDEADGSNEYNN--FQRGSLNTTRQLIQDL--K-NIDIVFHIGDICYANGYISQWDQF--T-----AQ 352 (390)
Q Consensus 285 ~~~~f~vfGDmG~~~~dgs~~~~~--~qp~s~~T~~~l~~~~--~-~~DfVlhiGDisYa~G~~~~WD~F--~-----~~ 352 (390)
..+|++...|++..-. ....|.+ ...+.+.-+..++++. + .--+++..||+....-.. .|..+ + +.
T Consensus 24 ~~L~IL~TnDlHg~l~-~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~-~~~~~~~~~~g~~~p 101 (649)
T PRK09420 24 VDLRIMETTDLHSNMM-DFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLG-DYMAAKGLKAGDVHP 101 (649)
T ss_pred ceEEEEEEcccccCcc-CCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhh-hhhhhccccCCCcch
Confidence 3599999999986421 1111111 0111222334444432 1 224899999997433211 11111 0 01
Q ss_pred hhhHhccceE-EEeecCcccccc
Q 016427 353 IEPIASTVPY-MIARFVIIHYVA 374 (390)
Q Consensus 353 iepias~vPy-mva~GNHE~~~~ 374 (390)
+-.++..+-| ..++||||+++.
T Consensus 102 ~i~amN~lgyDa~tlGNHEFd~G 124 (649)
T PRK09420 102 VYKAMNTLDYDVGNLGNHEFNYG 124 (649)
T ss_pred HHHHHHhcCCcEEeccchhhhcC
Confidence 1112223333 457999998874
No 128
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=48.86 E-value=31 Score=37.28 Aligned_cols=51 Identities=16% Similarity=0.191 Sum_probs=34.4
Q ss_pred CeEEEEEecCCCCCCCCCCcc-cccccCcHHHHHHHHHHc--CCccEEEEeCcccccc
Q 016427 286 LQQVIIFGDMGKDEADGSNEY-NNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYAN 340 (390)
Q Consensus 286 ~~~f~vfGDmG~~~~dgs~~~-~~~qp~s~~T~~~l~~~~--~~~DfVlhiGDisYa~ 340 (390)
.+|+++--|-+.+-. |- ......|..|+..+++-. ++.|||+..|||--.|
T Consensus 13 tirILVaTD~HlGY~----EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeN 66 (646)
T KOG2310|consen 13 TIRILVATDNHLGYG----EKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHEN 66 (646)
T ss_pred ceEEEEeecCccccc----cCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccC
Confidence 589999999876422 11 011223667777766532 6899999999997664
No 129
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain. Glycogen debranching enzymes have both 4-alpha-glucanotransferase and amylo-1,6-glucosidase activities. As a transferase it transfers a segment of a 1,4-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or another 1,4-alpha-D-glucan. As a glucosidase it catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. The N-terminus of the glycogen debranching enzyme may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=47.93 E-value=26 Score=28.75 Aligned_cols=23 Identities=22% Similarity=0.466 Sum_probs=20.1
Q ss_pred ceEEEEEeCCCCCCCEEEEEEce
Q 016427 238 GYIHTGFLRELWPNAMYTYKLGH 260 (390)
Q Consensus 238 g~iH~a~LtgL~PgT~Y~YrVG~ 260 (390)
+-++++.+.++.+|+.|.|||..
T Consensus 44 ~GvW~~~v~~~~~g~~Y~y~i~g 66 (103)
T cd02856 44 GGVWHGFLPGIKAGQRYGFRVHG 66 (103)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 45778999999999999999965
No 130
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=47.36 E-value=32 Score=40.50 Aligned_cols=87 Identities=15% Similarity=0.123 Sum_probs=42.0
Q ss_pred CeEEEEEecCCCCCCCCCCccc--ccccCcHHHHHHHHHHc--CCcc-EEEEeCccccccCCchhH----HHHH-Hhhhh
Q 016427 286 LQQVIIFGDMGKDEADGSNEYN--NFQRGSLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQW----DQFT-AQIEP 355 (390)
Q Consensus 286 ~~~f~vfGDmG~~~~dgs~~~~--~~qp~s~~T~~~l~~~~--~~~D-fVlhiGDisYa~G~~~~W----D~F~-~~iep 355 (390)
.++++...|++..-.. ...+. ....+.+.-+..++++. ++.+ +++..||+...+-.. .+ ..++ ...+|
T Consensus 41 ~l~il~tnD~Hg~l~~-~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~-~~~~~~~~~~~~~~~~ 118 (1163)
T PRK09419 41 NIQILATTDLHGNFMD-YDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLG-EYAVKDNILFKNKTHP 118 (1163)
T ss_pred EEEEEEEecccccccc-cccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhh-hHHhhhccccCCCcCH
Confidence 4899999999754211 10000 01112334445555442 2333 777899998643210 00 0000 11122
Q ss_pred H---hccceE-EEeecCcccccc
Q 016427 356 I---ASTVPY-MIARFVIIHYVA 374 (390)
Q Consensus 356 i---as~vPy-mva~GNHE~~~~ 374 (390)
+ +..+-| ..++||||+++.
T Consensus 119 ~i~~mN~lgyDa~~lGNHEFd~G 141 (1163)
T PRK09419 119 MIKAMNALGYDAGTLGNHEFNYG 141 (1163)
T ss_pred HHHHHhhcCccEEeecccccccC
Confidence 2 223333 357999998864
No 131
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=45.49 E-value=73 Score=33.96 Aligned_cols=82 Identities=13% Similarity=0.175 Sum_probs=48.4
Q ss_pred CCeEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHH---cCCccEEEEeCccccccC-C------------chhHHH
Q 016427 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD---LKNIDIVFHIGDICYANG-Y------------ISQWDQ 348 (390)
Q Consensus 285 ~~~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~---~~~~DfVlhiGDisYa~G-~------------~~~WD~ 348 (390)
..+++++.+|.+.+ |.+|.. ..+...+++|.-. ..+...++.+||++..-| | ..|.++
T Consensus 224 e~v~v~~isDih~G----Sk~F~~--~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~ 297 (481)
T COG1311 224 ERVYVALISDIHRG----SKEFLE--DEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEE 297 (481)
T ss_pred cceEEEEEeeeecc----cHHHHH--HHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHH
Confidence 35889999999875 334321 1122333443322 134568999999986321 2 123344
Q ss_pred HHHhhhhHhccceEEEeecCcccc
Q 016427 349 FTAQIEPIASTVPYMIARFVIIHY 372 (390)
Q Consensus 349 F~~~iepias~vPymva~GNHE~~ 372 (390)
+-+.+..+-..+-+++.|||||.-
T Consensus 298 ~A~~L~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 298 LAEFLDQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred HHHHHhhCCCCceEEEecCCCCcc
Confidence 434444556678899999999954
No 132
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain. Isoamylase (aka glycogen 6-glucanohydrolase) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase contains a bound calcium ion, but this is not in the same position as the conserved calcium ion that has been reported in other alpha-amylase family enzymes. The N-terminus of isoamylase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=44.32 E-value=28 Score=29.22 Aligned_cols=23 Identities=26% Similarity=0.576 Sum_probs=20.2
Q ss_pred ceEEEEEeCCCCCCCEEEEEEce
Q 016427 238 GYIHTGFLRELWPNAMYTYKLGH 260 (390)
Q Consensus 238 g~iH~a~LtgL~PgT~Y~YrVG~ 260 (390)
|-++++.+.++.+|+.|-|||..
T Consensus 48 ~gvW~~~v~~~~~g~~Y~y~v~g 70 (119)
T cd02852 48 GDVWHVFVEGLKPGQLYGYRVDG 70 (119)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 45778999999999999999974
No 133
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=44.05 E-value=39 Score=30.99 Aligned_cols=76 Identities=13% Similarity=0.151 Sum_probs=40.0
Q ss_pred EEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHc---CCccEEEEeCccccccCCc---------hhH-HHHHHh---
Q 016427 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYI---------SQW-DQFTAQ--- 352 (390)
Q Consensus 289 f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~---~~~DfVlhiGDisYa~G~~---------~~W-D~F~~~--- 352 (390)
|++++|...... ....+-+..+++.. .+++.++.+|++....... ... ..++..
T Consensus 1 Iv~~Sg~~~~~~----------~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (209)
T PF04042_consen 1 IVFASGPFLDSD----------NLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDS 70 (209)
T ss_dssp EEEEES--CTTT-----------HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHH
T ss_pred CEEEecCccCCC----------HhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHH
Confidence 467777766521 11133445555432 4689999999998753211 111 223332
Q ss_pred -hhhHhccceEEEeecCcccccc
Q 016427 353 -IEPIASTVPYMIARFVIIHYVA 374 (390)
Q Consensus 353 -iepias~vPymva~GNHE~~~~ 374 (390)
++.+..++.+..+||+||.-..
T Consensus 71 ~~~~i~~~~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 71 FLESILPSTQVVLVPGPNDPTSS 93 (209)
T ss_dssp HHCCCHCCSEEEEE--TTCTT-S
T ss_pred HHhhcccccEEEEeCCCcccccc
Confidence 3345578899999999996654
No 134
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus. Pullulanase (AKA dextrinase; alpha-dextrin endo-1,6-alpha glucosidase) is an enzyme with action similar to that of isoamylase; it cleaves 1,6-alpha-glucosidic linkages in pullulan, amylopectin, and glycogen, and in alpha-and beta-amylase limit-dextrins of amylopectin and glycogen. The N-terminus of pullulanase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=42.96 E-value=33 Score=27.87 Aligned_cols=25 Identities=12% Similarity=0.033 Sum_probs=20.8
Q ss_pred CceEEEEEeCCCCCCCEEEEEEcee
Q 016427 237 PGYIHTGFLRELWPNAMYTYKLGHR 261 (390)
Q Consensus 237 pg~iH~a~LtgL~PgT~Y~YrVG~~ 261 (390)
.+-++++.+.++.+|..|.||+...
T Consensus 45 ~~gvw~~~v~~~~~g~~Y~y~i~~~ 69 (100)
T cd02860 45 ENGVWSVTLDGDLEGYYYLYEVKVY 69 (100)
T ss_pred CCCEEEEEeCCccCCcEEEEEEEEe
Confidence 3457789999999999999999753
No 135
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain. MTSase and maltooligosyl trehalose trehalohydrolase (MTHase) work together to produce trehalose. MTSase is responsible for converting the alpha-1,4-glucosidic linkage to an alpha,alpha-1,1-glucosidic linkage at the reducing end of the maltooligosaccharide through an intramolecular transglucosylation reaction, while MTHase hydrolyzes the penultimate alpha-1,4 linkage of the reducing end, resulting in the release of trehalose. The N-terminus of MTSase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=42.54 E-value=35 Score=26.96 Aligned_cols=21 Identities=14% Similarity=0.188 Sum_probs=18.2
Q ss_pred eEEEEEeCCCCCCCEEEEEEce
Q 016427 239 YIHTGFLRELWPNAMYTYKLGH 260 (390)
Q Consensus 239 ~iH~a~LtgL~PgT~Y~YrVG~ 260 (390)
-++++++.++ +|..|.|++..
T Consensus 40 G~W~~~v~~~-~g~~Y~y~v~~ 60 (85)
T cd02853 40 GWFEAEVPGA-AGTRYRYRLDD 60 (85)
T ss_pred cEEEEEeCCC-CCCeEEEEECC
Confidence 4678899999 99999999973
No 136
>PF07353 Uroplakin_II: Uroplakin II; InterPro: IPR009952 This family contains uroplakin II, which is approximately 180 residues long and seems to be restricted to mammals. Uroplakin II is an integral membrane protein, and is one of the components of the apical plaques of mammalian urothelium formed by the asymmetric unit membrane - this is believed to play a role in strengthening the urothelial apical surface to prevent the cells from rupturing during bladder distension [].; GO: 0016044 cellular membrane organization, 0030176 integral to endoplasmic reticulum membrane
Probab=42.39 E-value=29 Score=31.74 Aligned_cols=35 Identities=17% Similarity=0.115 Sum_probs=21.1
Q ss_pred EEeCCCCCCCEEE--EEEceecCCCCccccceEEEEeCCC
Q 016427 243 GFLRELWPNAMYT--YKLGHRLFNGTYIWSSEYQFKASPY 280 (390)
Q Consensus 243 a~LtgL~PgT~Y~--YrVG~~~~dg~~~wS~~~sF~T~P~ 280 (390)
-.+++|.|||+|| |+|..+. ...-|.+..-.|.|.
T Consensus 104 YqVtNL~pGTkY~isY~Vtkgt---stESS~~i~msT~n~ 140 (184)
T PF07353_consen 104 YQVTNLQPGTKYYISYLVTKGT---STESSNEIPMSTLNR 140 (184)
T ss_pred EEeeccCCCcEEEEEEEEecCc---cceecceeccccccc
Confidence 3579999999998 5554432 122234455556554
No 137
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=39.45 E-value=35 Score=33.33 Aligned_cols=41 Identities=22% Similarity=0.124 Sum_probs=22.8
Q ss_pred CCccEEEEeCccccccCC---chhHHHHHHhhhhHhccceEEEeecCccccc
Q 016427 325 KNIDIVFHIGDICYANGY---ISQWDQFTAQIEPIASTVPYMIARFVIIHYV 373 (390)
Q Consensus 325 ~~~DfVlhiGDisYa~G~---~~~WD~F~~~iepias~vPymva~GNHE~~~ 373 (390)
-++|||+-+|..+ +.|+ ....+++++.- +-+ ++.|||=.+.
T Consensus 26 ~~~DfVIaNgENa-a~G~Git~~~~~~L~~~G------vDv-iT~GNH~wdk 69 (253)
T PF13277_consen 26 YGIDFVIANGENA-AGGFGITPKIAEELFKAG------VDV-ITMGNHIWDK 69 (253)
T ss_dssp -G-SEEEEE-TTT-TTTSS--HHHHHHHHHHT-------SE-EE--TTTTSS
T ss_pred cCCCEEEECCccc-CCCCCCCHHHHHHHHhcC------CCE-EecCcccccC
Confidence 4799999999999 6665 33445555432 333 4788987654
No 138
>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....
Probab=37.59 E-value=48 Score=26.73 Aligned_cols=34 Identities=18% Similarity=0.012 Sum_probs=21.0
Q ss_pred EEEeCCCCCCCEEEEEEceec--CCCCccccceEEE
Q 016427 242 TGFLRELWPNAMYTYKLGHRL--FNGTYIWSSEYQF 275 (390)
Q Consensus 242 ~a~LtgL~PgT~Y~YrVG~~~--~dg~~~wS~~~sF 275 (390)
.++|.+|+|++.|--+|.... .+..+.||++.=.
T Consensus 68 ~~~l~~L~p~t~YCv~V~~~~~~~~~~s~~S~~~C~ 103 (106)
T PF09294_consen 68 SVTLSDLKPGTNYCVSVQAFSPSQNKNSQPSEPQCI 103 (106)
T ss_dssp EEEEES--TTSEEEEEEEEEECSSTEEEEEBSEEEE
T ss_pred EEEEeCCCCCCCEEEEEEEEeccCCCcCCCCCCEeE
Confidence 468999999999999998721 1113456655433
No 139
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=37.39 E-value=1.5e+02 Score=29.70 Aligned_cols=87 Identities=11% Similarity=0.062 Sum_probs=49.9
Q ss_pred ceEEEEeCCCCCCCCCeEEEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcC-------CccEEEEeCcccccc---
Q 016427 271 SEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK-------NIDIVFHIGDICYAN--- 340 (390)
Q Consensus 271 ~~~sF~T~P~~g~~~~~~f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~-------~~DfVlhiGDisYa~--- 340 (390)
..|....... +...+|+++||+....+ .-++.++++.+..+ -+-.++.+|+++-..
T Consensus 15 ~~~~~~~~~~---~~~~~~VilSDV~LD~p-----------~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~ 80 (291)
T PTZ00235 15 EEYEIIVRKN---DKRHNWIIMHDVYLDSP-----------YTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDY 80 (291)
T ss_pred ceEEEEEecC---CCceEEEEEEeeccCCH-----------HHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccC
Confidence 3455554432 23489999999987642 12333333334332 166889999987542
Q ss_pred --CCchhHHHHHHhhh--------hHhccceEEEeecCccc
Q 016427 341 --GYISQWDQFTAQIE--------PIASTVPYMIARFVIIH 371 (390)
Q Consensus 341 --G~~~~WD~F~~~ie--------pias~vPymva~GNHE~ 371 (390)
+......+.|+.+. .+..+.=++.+||-.|-
T Consensus 81 ~~~~~~~yk~~Fd~La~llls~fp~L~~~s~fVFVPGpnDP 121 (291)
T PTZ00235 81 NRNFHKVYIKGFEKLSVMLISKFKLILEHCYLIFIPGINDP 121 (291)
T ss_pred CCCchHHHHHHHHHHHHHHHHhChHHHhcCeEEEECCCCCC
Confidence 11122333344332 35566778999998885
No 140
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=34.24 E-value=1.1e+02 Score=30.26 Aligned_cols=72 Identities=18% Similarity=0.177 Sum_probs=39.5
Q ss_pred EEEEecCCCCCCCCCCcccccccCcHHHHHHHHHHcCC--ccEEEEeCccccccCCchhHHHHHHhhhhHhccce--EEE
Q 016427 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKN--IDIVFHIGDICYANGYISQWDQFTAQIEPIASTVP--YMI 364 (390)
Q Consensus 289 f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~~~~--~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vP--ymv 364 (390)
+.+.||++..- .-+-.|.+-.+. -.=-++.||++ ++||.+. +.|+=.+- +--+.| +..
T Consensus 45 vtvcGDIHGQf---------------~Dllelf~igG~~~~t~YLFLGDyV-DRG~~Sv-Et~lLLl~-lK~rYP~ritL 106 (303)
T KOG0372|consen 45 VTVCGDIHGQF---------------YDLLELFRIGGDVPETNYLFLGDYV-DRGYYSV-ETFLLLLA-LKVRYPDRITL 106 (303)
T ss_pred cEEeecccchH---------------HHHHHHHHhCCCCCCCceEeecchh-ccccchH-HHHHHHHH-HhhcCcceeEE
Confidence 67899997532 123344442211 12356789999 5677542 44443221 222333 567
Q ss_pred eecCccccccCCCC
Q 016427 365 ARFVIIHYVAHQLG 378 (390)
Q Consensus 365 a~GNHE~~~~~~~g 378 (390)
..||||-...-+..
T Consensus 107 iRGNHEsRqitqvY 120 (303)
T KOG0372|consen 107 IRGNHESRQITQVY 120 (303)
T ss_pred eeccchhhhhhhhh
Confidence 89999976654443
No 141
>PF02922 CBM_48: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); InterPro: IPR004193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. This domain is found in a range of enzymes that act on branched substrates ie. isoamylase, pullulanase and branching enzyme. Isoamylase hydrolyses 1,6-alpha-D-glucosidic branch linkages in glycogen, amylopectin and dextrin; 1,4-alpha-glucan branching enzyme functions in the formation of 1,6-glucosidic linkages of glycogen; and pullulanase is a starch-debranching enzyme.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BHZ_A 2BY2_A 2BY3_A 2BXY_A 2BY1_A 2BHY_A 2BHU_A 2BXZ_A 2BY0_A 2FHB_A ....
Probab=25.44 E-value=86 Score=24.21 Aligned_cols=23 Identities=17% Similarity=0.338 Sum_probs=18.4
Q ss_pred eEEEEEeC-CCCCCC-EEEEEEcee
Q 016427 239 YIHTGFLR-ELWPNA-MYTYKLGHR 261 (390)
Q Consensus 239 ~iH~a~Lt-gL~PgT-~Y~YrVG~~ 261 (390)
-+++++|. +|.+|. .|.|||...
T Consensus 49 G~w~~~~~~~~~~g~~~Y~y~i~~~ 73 (85)
T PF02922_consen 49 GVWEVTVPGDLPPGGYYYKYRIDGD 73 (85)
T ss_dssp TEEEEEEEGCGTTTT-EEEEEEEET
T ss_pred CEEEEEEcCCcCCCCEEEEEEEEeC
Confidence 45677788 889885 999999875
No 142
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=24.70 E-value=3e+02 Score=31.74 Aligned_cols=121 Identities=11% Similarity=0.010 Sum_probs=67.1
Q ss_pred CCcccEeeeCC-CCCeEEEEEEeCCCCC---CCccEEEEeecCCCCccccccceEEeccccCCCCCccc--cccC---C-
Q 016427 168 APVYPRLAQGK-VWNEMTVTWTSGYGIN---EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTV--GWRD---P- 237 (390)
Q Consensus 168 ~P~qvhLa~~~-d~~~m~VtW~T~~~~~---~~~~~V~yG~~~~~~~~~~a~t~Ty~~~~mcg~PA~t~--g~rd---p- 237 (390)
++.-++++.+. +.+++.+.|..-.... --.-.+.|...+.. + ...|...+-||.---+. -+-+ |
T Consensus 488 e~~~l~~~~~~~~~dsi~lrW~~~~~~d~r~llg~~~~yKEaP~q-N-----vT~~dg~~aCg~~~W~~~~v~~~~~~p~ 561 (1025)
T KOG4258|consen 488 EDLVLQFSSTVTSADSILLRWERYQPPDMRDLLGFLLHYKEAPFQ-N-----VTEEDGRDACGSNSWNVVDVDPPDLIPN 561 (1025)
T ss_pred ccceeeeeeEEeecceeEEEecccCCcchhhhheeeEeeccCCcc-c-----cceecCccccccCcceEEeccCCcCCCc
Confidence 45666666665 3588999997654310 00123444444421 1 12356666676321000 0000 1
Q ss_pred -ceEEEEEeCCCCCCCEEEEEEceecCC----CCccccceEEEEeCCCCCCCCCeEEEEEecC
Q 016427 238 -GYIHTGFLRELWPNAMYTYKLGHRLFN----GTYIWSSEYQFKASPYPGQDSLQQVIIFGDM 295 (390)
Q Consensus 238 -g~iH~a~LtgL~PgT~Y~YrVG~~~~d----g~~~wS~~~sF~T~P~~g~~~~~~f~vfGDm 295 (390)
+......|.||+|.|.|.|-|..-... ...+.|++..|+|.|... +-++.++.-.+.
T Consensus 562 ~~~~~~~~l~~LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~P-spPl~~ls~sns 623 (1025)
T KOG4258|consen 562 DGTHPGFLLDGLKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDIP-SPPLDVLSKSNS 623 (1025)
T ss_pred cccccceehhcCCccceeEEEEeeeehhhhccccccccceEEEEecCCCC-CCcchhhhccCc
Confidence 233367899999999999998864211 123679999999998642 234555555444
No 143
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=23.57 E-value=77 Score=30.75 Aligned_cols=70 Identities=19% Similarity=0.282 Sum_probs=39.5
Q ss_pred EEEEecCCCCCCCCCCcccccccCcHHHHHHHHHH---cCCccEEEEeCccccccCCchhHHHHHHhhhhHhccceE--E
Q 016427 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD---LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY--M 363 (390)
Q Consensus 289 f~vfGDmG~~~~dgs~~~~~~qp~s~~T~~~l~~~---~~~~DfVlhiGDisYa~G~~~~WD~F~~~iepias~vPy--m 363 (390)
+.+-||.+..- .-+-.|.+. +++.. -++.||++ ++||.+ -+.| ..+--+.++.|- -
T Consensus 48 VTvCGDIHGQF---------------yDL~eLFrtgG~vP~tn-YiFmGDfV-DRGyyS-LEtf-T~l~~LkaryP~~IT 108 (306)
T KOG0373|consen 48 VTVCGDIHGQF---------------YDLLELFRTGGQVPDTN-YIFMGDFV-DRGYYS-LETF-TLLLLLKARYPAKIT 108 (306)
T ss_pred eeEeeccchhH---------------HHHHHHHHhcCCCCCcc-eEEecccc-cccccc-HHHH-HHHHHHhhcCCceeE
Confidence 67899986431 223445543 23333 45689999 566654 1333 333344555553 3
Q ss_pred EeecCccccccCCC
Q 016427 364 IARFVIIHYVAHQL 377 (390)
Q Consensus 364 va~GNHE~~~~~~~ 377 (390)
...||||-.+.-+.
T Consensus 109 LlRGNHEsRqitqV 122 (306)
T KOG0373|consen 109 LLRGNHESRQITQV 122 (306)
T ss_pred Eeeccchhhhhhhh
Confidence 46899997655443
No 144
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=22.56 E-value=71 Score=32.03 Aligned_cols=18 Identities=22% Similarity=0.348 Sum_probs=14.8
Q ss_pred EEEeCCCCCCCEEEEEEc
Q 016427 242 TGFLRELWPNAMYTYKLG 259 (390)
Q Consensus 242 ~a~LtgL~PgT~Y~YrVG 259 (390)
.-+|.+|+|||+||+-|=
T Consensus 16 ~~t~~~L~p~t~YyfdVF 33 (300)
T PF10179_consen 16 NQTLSGLKPDTTYYFDVF 33 (300)
T ss_pred eEEeccCCCCCeEEEEEE
Confidence 456789999999998763
No 145
>PF13205 Big_5: Bacterial Ig-like domain
Probab=21.88 E-value=1.3e+02 Score=23.91 Aligned_cols=16 Identities=25% Similarity=0.428 Sum_probs=13.7
Q ss_pred CCCCCCCEEEEEEcee
Q 016427 246 RELWPNAMYTYKLGHR 261 (390)
Q Consensus 246 tgL~PgT~Y~YrVG~~ 261 (390)
..|.||++|.-.+..+
T Consensus 70 ~~L~~~t~Y~v~i~~~ 85 (107)
T PF13205_consen 70 QPLKPGTTYTVTIDSG 85 (107)
T ss_pred CcCCCCCEEEEEECCC
Confidence 5699999999999665
No 146
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=20.77 E-value=1.1e+02 Score=33.79 Aligned_cols=51 Identities=18% Similarity=0.120 Sum_probs=34.4
Q ss_pred EEEEEeCCCCCCCEEEEEEceecCCCCccccceEEEEeCCCCCCCCCeEEEEEecCC
Q 016427 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMG 296 (390)
Q Consensus 240 iH~a~LtgL~PgT~Y~YrVG~~~~dg~~~wS~~~sF~T~P~~g~~~~~~f~vfGDmG 296 (390)
++++++.++.||++|-|++..... ....-.+.|+|.+.+.+.. --.++|..
T Consensus 74 ~we~~vp~~~~G~~Yky~l~~~~g-~~~~~~DP~a~~~~~~p~~-----aS~v~~~~ 124 (628)
T COG0296 74 IWELFVPGAPPGTRYKYELIDPSG-QLRLKADPYARRQEVGPHT-----ASQVVDLP 124 (628)
T ss_pred eEEEeccCCCCCCeEEEEEeCCCC-ceeeccCchhhccCCCCCC-----cceecCCC
Confidence 678999999999999999987631 0112456777777665433 33455654
Done!