Query 016430
Match_columns 389
No_of_seqs 252 out of 626
Neff 5.1
Searched_HMMs 13730
Date Mon Mar 25 13:27:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016430.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016430hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1rk8c_ b.72.3.1 (C:) Pym (Wit 72.3 0.092 6.7E-06 33.1 -2.8 9 275-283 18-26 (33)
2 d1s4ka_ a.35.1.6 (A:) Putative 61.0 1.8 0.00013 34.6 2.1 31 57-88 28-60 (120)
3 d1oyja1 a.45.1.1 (A:86-230) Cl 24.9 25 0.0018 27.2 3.5 30 74-103 46-75 (145)
4 d2bzea1 b.34.21.1 (A:345-476) 15.0 53 0.0039 25.5 3.3 37 50-86 86-129 (132)
5 d1g8ia_ a.39.1.5 (A:) Frequeni 11.2 25 0.0018 27.9 0.0 19 54-72 156-174 (187)
6 d2a6sa1 d.298.1.1 (A:1-83) Tox 10.0 44 0.0032 24.4 1.1 55 61-122 10-70 (83)
7 d1vb3a1 c.79.1.1 (A:1-428) Thr 9.8 2.6E+02 0.019 25.6 7.0 82 192-288 115-196 (428)
8 d1zy9a1 b.30.5.11 (A:1-177) Al 9.5 32 0.0024 28.7 0.1 16 56-71 54-69 (177)
9 d1snla_ a.39.1.7 (A:) Nucleobi 9.0 33 0.0024 24.8 0.0 15 53-67 78-93 (99)
10 d2dara2 g.39.1.3 (A:8-52) PDZ 8.5 59 0.0043 21.4 1.1 16 143-158 14-29 (45)
No 1
>d1rk8c_ b.72.3.1 (C:) Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=72.32 E-value=0.092 Score=33.15 Aligned_cols=9 Identities=44% Similarity=1.055 Sum_probs=7.8
Q ss_pred cCChHHHHH
Q 016430 275 DGTWSNSAA 283 (389)
Q Consensus 275 DGTW~QArK 283 (389)
||||+++|+
T Consensus 18 DGtWRK~rr 26 (33)
T d1rk8c_ 18 DGTWRKARR 26 (33)
T ss_dssp TSCEECCEE
T ss_pred CCcccccee
Confidence 999998765
No 2
>d1s4ka_ a.35.1.6 (A:) Putative cytoplasmic protein YdiL {Salmonella typhimurium [TaxId: 90371]}
Probab=61.01 E-value=1.8 Score=34.60 Aligned_cols=31 Identities=23% Similarity=0.470 Sum_probs=23.0
Q ss_pred Cccchhhhccc--CCCCCchHHHHHHHHHHHHHH
Q 016430 57 GFITLQEWQGW--GAVSPLPALVQQIVEDLKALE 88 (389)
Q Consensus 57 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 88 (389)
++++.+-||+| |. -++|..|.+.+-.+.+.-
T Consensus 28 ~~~~s~tWQqWE~Gd-~~IP~~Vi~~l~~m~~~R 60 (120)
T d1s4ka_ 28 QDNNSATWQRWEAGD-IPISPEIIARLKEMKARR 60 (120)
T ss_dssp SSCCHHHHHHHHHTS-SCCCHHHHHHHHHHHHHH
T ss_pred cCccHHHHHHHHcCC-CCCCHHHHHHHHHHHHHH
Confidence 56788999999 54 578888877776666543
No 3
>d1oyja1 a.45.1.1 (A:86-230) Class tau GST {Rice (Oryza sativa) [TaxId: 4530]}
Probab=24.90 E-value=25 Score=27.20 Aligned_cols=30 Identities=33% Similarity=0.535 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCcccCCCCCc
Q 016430 74 PALVQQIVEDLKALEKNFDAPMSFGGNGGR 103 (389)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (389)
-.+..++.+-|..+|+.++.+--|||.+|.
T Consensus 46 e~a~~~~~~~L~~lE~~l~~~~~~~g~~g~ 75 (145)
T d1oyja1 46 AAAGREMAEILRTLEAELGDREFFGGGGGG 75 (145)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSSSSSSSCC
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCCCcC
Confidence 356788999999999999999888988763
No 4
>d2bzea1 b.34.21.1 (A:345-476) RNA polymerase-associated protein RTF1 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.05 E-value=53 Score=25.54 Aligned_cols=37 Identities=16% Similarity=0.221 Sum_probs=23.4
Q ss_pred ccCCCCCCccchhhhccc-------CCCCCchHHHHHHHHHHHH
Q 016430 50 HIGDTDDGFITLQEWQGW-------GAVSPLPALVQQIVEDLKA 86 (389)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 86 (389)
++...+|..+|.+||++| |-.-|-...|.+=.+||+.
T Consensus 86 ~l~~vSn~~fte~E~~~w~~~~~~~~~~~Pt~~~l~~K~~~i~~ 129 (132)
T d2bzea1 86 RLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKELSIKE 129 (132)
T ss_dssp CGGGBCCSCCCHHHHHHHHHHHHHHTCCCCBHHHHHHHHHHHHH
T ss_pred EeEEEeCCCCCHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHH
Confidence 444677889999999999 3334444444444444443
No 5
>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.17 E-value=25 Score=27.94 Aligned_cols=19 Identities=42% Similarity=0.588 Sum_probs=15.0
Q ss_pred CCCCccchhhhcccCCCCC
Q 016430 54 TDDGFITLQEWQGWGAVSP 72 (389)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~ 72 (389)
.+||.||.+||..|-...|
T Consensus 156 d~dG~Is~~EF~~~~~~~p 174 (187)
T d1g8ia_ 156 NADGKLTLQEFQEGSKADP 174 (187)
T ss_dssp SCSSEEEHHHHHHHHHHCH
T ss_pred CCCCcEeHHHHHHHHHHCH
Confidence 4559999999999865554
No 6
>d2a6sa1 d.298.1.1 (A:1-83) Toxin YoeB {Escherichia coli [TaxId: 562]}
Probab=10.04 E-value=44 Score=24.40 Aligned_cols=55 Identities=22% Similarity=0.404 Sum_probs=35.7
Q ss_pred hhhhcccCCCCCchHHHHHHHHHHHHHHHcCCCCcccCCC------CCccccccccccchhhHHHHhh
Q 016430 61 LQEWQGWGAVSPLPALVQQIVEDLKALEKNFDAPMSFGGN------GGRLQGDFKILEDKKHRATYQT 122 (389)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~rl~~~r 122 (389)
.+++..|=++. |..+.+|..=|.++.+. +|-|. .|.|+|-|.-+.|..||+.|+-
T Consensus 10 ~~d~~~~~~~d--~k~~kkI~~ll~~i~~~-----p~~g~gkpE~Lkg~l~g~wSrRI~~~~RlVY~v 70 (83)
T d2a6sa1 10 WDDYLYWQETD--KRIVKKINELIKDTRRT-----PFEGKGKPEPLKHNLSGFWSRRITEEHRLVYAV 70 (83)
T ss_dssp HHHHHHHHTTC--HHHHHHHHHHHHHHHHS-----TTSSTTCCEECCGGGTTCEEEESSSSCEEEEEE
T ss_pred HHHHHHHHHhC--HHHHHHHHHHHHHHHhC-----cCCCCCCCccccCCCCCEEEEEeCCCceEEEEE
Confidence 45566663333 57777776666666543 24343 3567777888999999999874
No 7
>d1vb3a1 c.79.1.1 (A:1-428) Threonine synthase {Escherichia coli [TaxId: 562]}
Probab=9.76 E-value=2.6e+02 Score=25.65 Aligned_cols=82 Identities=18% Similarity=0.220 Sum_probs=46.7
Q ss_pred HHHHHHhcccCCeEEEEeccCCChHHHHHHHHhcCCCCeEEEccCCCccccccccccCCCCCCCccCCCCCCCCCCceeE
Q 016430 192 GKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNAIKMSVQDTLGYGSSEDLEYTPMMTDGDNTLNF 271 (389)
Q Consensus 192 GrLla~~L~~~~~~i~~~Gr~e~e~~l~~~L~~dp~~~~~LLFP~e~A~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 271 (389)
|.++...+......|.+---.++-.+..+.....+.-.++||||.....+.+... .+ ..+....+
T Consensus 115 ~~~~~~~~~~~~~~Il~ATSGDTG~Aa~~a~~~~~~i~~~vl~P~g~vS~~Q~~Q-------------mt--t~g~nv~v 179 (428)
T d1vb3a1 115 AQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKL-------------FC--TLGGNIET 179 (428)
T ss_dssp HHHHHHHTTTCCEEEEEECSSSHHHHHHHHTTTCTTEEEEEEEETTCSCHHHHHH-------------HH--SCCTTEEE
T ss_pred HHHHhhhcccccceeeecCCCCcchhHHHHHhCccccceEEEecCCCCcHHHHHH-------------Hh--hccCCceE
Confidence 5555555432223333321122234444555434445689999988766554321 01 12445678
Q ss_pred EEEcCChHHHHHHHHHh
Q 016430 272 VLIDGTWSNSAAMFNRL 288 (389)
Q Consensus 272 IlLDGTW~QArKMfrri 288 (389)
|-+||+--.+.+|.+++
T Consensus 180 i~V~G~fDDcq~lvk~~ 196 (428)
T d1vb3a1 180 VAIDGDFDACQALVKQA 196 (428)
T ss_dssp EEEESCHHHHHHHHHHG
T ss_pred EecCCChhHHHHHHHHH
Confidence 99999999998888863
No 8
>d1zy9a1 b.30.5.11 (A:1-177) Alpha-galactosidase GalA N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=9.46 E-value=32 Score=28.68 Aligned_cols=16 Identities=25% Similarity=0.804 Sum_probs=11.8
Q ss_pred CCccchhhhcccCCCC
Q 016430 56 DGFITLQEWQGWGAVS 71 (389)
Q Consensus 56 ~~~~~~~~~~~~~~~~ 71 (389)
+..|=.--||+||.+-
T Consensus 54 ~e~i~iNNWQSWgP~k 69 (177)
T d1zy9a1 54 PEKVLVNNWQSWGPCR 69 (177)
T ss_dssp CSEEEEECSBTTSCEE
T ss_pred CceeEEeccccccceE
Confidence 3446677899999865
No 9
>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.00 E-value=33 Score=24.77 Aligned_cols=15 Identities=40% Similarity=0.620 Sum_probs=11.6
Q ss_pred CC-CCCccchhhhccc
Q 016430 53 DT-DDGFITLQEWQGW 67 (389)
Q Consensus 53 ~~-~~~~~~~~~~~~~ 67 (389)
|+ +||.||.+||..+
T Consensus 78 D~d~DG~Is~~EF~~~ 93 (99)
T d1snla_ 78 DTNQDRLVTLEEFLAS 93 (99)
T ss_dssp CSSCSSEEEHHHHHHH
T ss_pred CCCCCCcCcHHHHHHH
Confidence 54 4599999999754
No 10
>d2dara2 g.39.1.3 (A:8-52) PDZ and LIM domain protein 5, Enigma {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.51 E-value=59 Score=21.37 Aligned_cols=16 Identities=19% Similarity=0.553 Sum_probs=13.6
Q ss_pred cCCCCcCCcccccCCC
Q 016430 143 LGSQGYLCQKCWIAME 158 (389)
Q Consensus 143 ~Gsr~~rC~~C~lp~~ 158 (389)
.|+|...|..|..|..
T Consensus 14 ~~~r~P~C~~C~~pI~ 29 (45)
T d2dara2 14 AGKRTPMCAHCNQVIR 29 (45)
T ss_dssp TTTCCCBBSSSCCBCC
T ss_pred CCCCCeeccccCCccc
Confidence 3889999999998854
Done!