Query 016433
Match_columns 389
No_of_seqs 589 out of 3652
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 13:30:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016433.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016433hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ui2_A Signal recognition part 100.0 3.6E-38 1.2E-42 283.2 -3.3 229 81-313 14-243 (244)
2 1yyh_A HN1;, notch 1, ankyrin 100.0 1.5E-32 5.3E-37 247.6 18.7 169 108-279 53-246 (253)
3 4gpm_A Engineered protein OR26 100.0 2.8E-32 9.5E-37 230.6 18.3 156 72-257 8-163 (169)
4 4gpm_A Engineered protein OR26 100.0 4.9E-31 1.7E-35 222.9 18.9 147 114-279 6-159 (169)
5 3d9h_A CDNA FLJ77766, highly s 100.0 1.1E-30 3.8E-35 239.8 21.3 169 106-278 53-244 (285)
6 3aji_A 26S proteasome non-ATPa 100.0 5E-31 1.7E-35 233.9 17.7 186 80-278 18-227 (231)
7 2f8y_A Notch homolog 1, transl 100.0 2.2E-30 7.7E-35 228.4 21.6 170 109-281 22-216 (223)
8 2fo1_E LIN-12 protein; beta-ba 100.0 7.3E-31 2.5E-35 250.2 19.3 195 80-277 125-367 (373)
9 1oy3_D Transcription factor in 100.0 8.6E-31 2.9E-35 239.1 18.4 170 108-280 5-249 (282)
10 1k1a_A B-cell lymphoma 3-encod 100.0 1.4E-31 4.8E-36 238.8 12.2 168 108-278 5-205 (241)
11 1n11_A Ankyrin; clathrin, BAND 100.0 1.4E-29 4.6E-34 246.3 25.4 196 68-278 15-234 (437)
12 1wdy_A 2-5A-dependent ribonucl 100.0 3.4E-29 1.2E-33 228.4 26.6 193 70-277 8-240 (285)
13 3eu9_A Huntingtin-interacting 100.0 9E-30 3.1E-34 226.4 22.0 202 64-280 6-234 (240)
14 3b7b_A Euchromatic histone-lys 100.0 2.8E-30 9.7E-35 229.9 18.6 149 110-277 42-198 (237)
15 3deo_A Signal recognition part 100.0 1.9E-31 6.6E-36 228.5 10.2 169 80-252 12-181 (183)
16 3utm_A Tankyrase-1; tankyrase, 100.0 8.5E-30 2.9E-34 239.6 22.0 195 70-278 27-302 (351)
17 4b93_B Ankyrin repeat domain-c 100.0 3.8E-31 1.3E-35 240.8 12.3 203 65-275 8-235 (269)
18 2xai_A ASB-9, ankyrin repeat a 100.0 6.7E-30 2.3E-34 231.5 19.8 164 111-278 2-188 (261)
19 2xai_A ASB-9, ankyrin repeat a 100.0 1.8E-30 6E-35 235.3 15.9 191 70-278 6-219 (261)
20 2rfa_A Transient receptor pote 100.0 1.8E-30 6.3E-35 230.5 15.4 114 106-222 31-162 (232)
21 2rfa_A Transient receptor pote 100.0 4.1E-30 1.4E-34 228.2 17.7 166 111-279 2-220 (232)
22 1s70_B 130 kDa myosin-binding 100.0 2E-29 6.7E-34 232.4 22.7 171 106-279 34-255 (299)
23 1oy3_D Transcription factor in 100.0 1E-30 3.6E-35 238.5 13.9 178 67-256 9-251 (282)
24 1n11_A Ankyrin; clathrin, BAND 100.0 3.8E-29 1.3E-33 243.1 25.4 199 66-279 46-268 (437)
25 3d9h_A CDNA FLJ77766, highly s 100.0 5.1E-30 1.7E-34 235.4 18.1 200 61-278 53-275 (285)
26 3ljn_A Hypothetical protein; a 100.0 4E-30 1.4E-34 244.1 17.9 204 58-278 11-266 (364)
27 3b7b_A Euchromatic histone-lys 100.0 2.1E-29 7.2E-34 224.3 20.8 157 104-279 3-167 (237)
28 1wdy_A 2-5A-dependent ribonucl 100.0 3.7E-29 1.3E-33 228.1 22.7 198 68-280 40-277 (285)
29 1yyh_A HN1;, notch 1, ankyrin 100.0 4.8E-30 1.6E-34 231.3 16.2 171 106-279 4-213 (253)
30 4g8k_A 2-5A-dependent ribonucl 100.0 2.3E-29 7.8E-34 236.3 21.5 210 67-280 59-325 (337)
31 3kea_A K1L; tropism, ANK repea 100.0 6.1E-31 2.1E-35 241.5 10.1 166 108-278 27-217 (285)
32 1k1a_A B-cell lymphoma 3-encod 100.0 3.2E-29 1.1E-33 223.5 20.7 203 73-278 2-238 (241)
33 3kea_A K1L; tropism, ANK repea 100.0 2.8E-30 9.7E-35 237.1 13.4 200 74-279 25-244 (285)
34 2fo1_E LIN-12 protein; beta-ba 100.0 1.4E-29 4.8E-34 241.3 18.1 199 75-278 89-335 (373)
35 2f8y_A Notch homolog 1, transl 100.0 5.2E-29 1.8E-33 219.7 19.5 178 67-258 25-219 (223)
36 2etb_A Transient receptor pote 100.0 8.3E-30 2.8E-34 229.9 14.4 146 108-255 39-246 (256)
37 2dzn_A Probable 26S proteasome 100.0 3.6E-29 1.2E-33 221.3 18.1 173 70-254 5-199 (228)
38 3hra_A Ankyrin repeat family p 100.0 7.5E-29 2.6E-33 215.0 19.4 166 111-278 4-200 (201)
39 2rfm_A Putative ankyrin repeat 100.0 3.4E-29 1.2E-33 216.0 16.6 152 108-278 31-189 (192)
40 2pnn_A Transient receptor pote 100.0 3.3E-29 1.1E-33 228.2 16.8 144 109-255 51-258 (273)
41 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.6E-29 8.8E-34 210.4 14.7 147 111-277 4-158 (162)
42 1ikn_D Protein (I-kappa-B-alph 100.0 1.8E-29 6.1E-34 224.9 14.5 185 76-279 4-207 (236)
43 3hra_A Ankyrin repeat family p 100.0 8.8E-29 3E-33 214.6 18.2 170 70-253 8-201 (201)
44 3v31_A Ankyrin repeat family A 100.0 9.7E-29 3.3E-33 208.1 17.3 149 111-278 2-157 (167)
45 3aji_A 26S proteasome non-ATPa 100.0 6.3E-29 2.2E-33 220.3 15.7 173 68-255 41-230 (231)
46 2etb_A Transient receptor pote 100.0 4.2E-29 1.4E-33 225.2 13.9 164 112-278 2-243 (256)
47 2y1l_E Darpin-8.4; hydrolase-i 100.0 3E-28 1E-32 205.7 17.9 150 110-278 12-168 (169)
48 3jxi_A Vanilloid receptor-rela 100.0 3.4E-29 1.1E-33 226.3 12.7 147 109-256 43-251 (260)
49 2dzn_A Probable 26S proteasome 100.0 4E-28 1.4E-32 214.5 19.1 164 112-278 2-197 (228)
50 3utm_A Tankyrase-1; tankyrase, 100.0 3.7E-28 1.3E-32 228.3 19.4 204 60-278 51-331 (351)
51 3ljn_A Hypothetical protein; a 100.0 1.4E-28 4.6E-33 233.5 16.5 169 104-277 12-232 (364)
52 4b93_B Ankyrin repeat domain-c 100.0 1.9E-29 6.4E-34 229.6 10.0 149 103-254 77-243 (269)
53 2rfm_A Putative ankyrin repeat 100.0 3.7E-28 1.3E-32 209.4 17.1 164 71-253 26-190 (192)
54 1d9s_A Cyclin-dependent kinase 100.0 1.8E-28 6.1E-33 199.5 14.0 132 105-255 5-136 (136)
55 2y1l_E Darpin-8.4; hydrolase-i 100.0 8.5E-28 2.9E-32 203.0 18.5 154 69-253 16-169 (169)
56 1awc_B Protein (GA binding pro 100.0 7.7E-28 2.6E-32 199.8 16.8 144 112-275 2-152 (153)
57 2pnn_A Transient receptor pote 100.0 1.1E-28 3.8E-33 224.7 12.5 176 105-281 6-258 (273)
58 3v30_A DNA-binding protein rfx 100.0 1E-27 3.5E-32 202.9 16.5 147 113-277 3-156 (172)
59 3v30_A DNA-binding protein rfx 100.0 1.7E-27 5.9E-32 201.4 17.4 148 79-255 13-160 (172)
60 1s70_B 130 kDa myosin-binding 100.0 2.4E-28 8.3E-33 225.1 13.0 175 67-256 40-258 (299)
61 3twr_A Tankyrase-2; ankyrin re 100.0 6.5E-28 2.2E-32 202.7 13.9 158 66-254 7-164 (165)
62 3v31_A Ankyrin repeat family A 100.0 1.9E-27 6.6E-32 200.1 16.5 154 71-255 7-160 (167)
63 1awc_B Protein (GA binding pro 100.0 1.1E-27 3.6E-32 198.9 14.0 141 78-249 12-152 (153)
64 4g8k_A 2-5A-dependent ribonucl 100.0 6.7E-26 2.3E-30 212.7 27.7 194 68-276 26-293 (337)
65 1sw6_A Regulatory protein SWI6 99.9 1.7E-28 5.7E-33 229.8 9.5 151 103-256 121-309 (327)
66 2jab_A H10-2-G3; HER2, darpin, 99.9 2.5E-27 8.5E-32 192.8 15.1 125 110-253 12-136 (136)
67 1n0r_A 4ANK, 4 ankyrin repeats 99.9 6.2E-27 2.1E-31 186.9 16.8 126 111-255 1-126 (126)
68 1bd8_A P19INK4D CDK4/6 inhibit 99.9 4.6E-27 1.6E-31 195.4 16.5 146 112-277 2-154 (156)
69 3twr_A Tankyrase-2; ankyrin re 99.9 1.3E-27 4.4E-32 200.9 12.6 151 109-278 5-162 (165)
70 3eu9_A Huntingtin-interacting 99.9 1.8E-26 6.2E-31 205.0 20.4 169 108-278 5-199 (240)
71 3f6q_A Integrin-linked protein 99.9 2.5E-27 8.4E-32 202.0 13.9 150 78-256 15-164 (179)
72 4hbd_A KN motif and ankyrin re 99.9 4.1E-27 1.4E-31 215.0 15.7 155 105-278 104-272 (276)
73 3jxi_A Vanilloid receptor-rela 99.9 2E-27 6.9E-32 214.6 13.0 167 109-278 2-247 (260)
74 3f6q_A Integrin-linked protein 99.9 3.8E-27 1.3E-31 200.8 13.9 153 111-281 4-163 (179)
75 1bi7_B P16INK4A, MTS1, multipl 99.9 2.7E-27 9.4E-32 197.2 11.4 131 108-258 8-139 (156)
76 1bd8_A P19INK4D CDK4/6 inhibit 99.9 5.5E-27 1.9E-31 195.0 12.5 151 70-252 5-155 (156)
77 1ikn_D Protein (I-kappa-B-alph 99.9 9.4E-27 3.2E-31 207.2 12.7 158 80-256 45-210 (236)
78 1ycs_B 53BP2, P53BP2; ankyrin 99.9 5.8E-27 2E-31 209.3 10.3 157 70-256 8-165 (239)
79 4hbd_A KN motif and ankyrin re 99.9 2.6E-26 8.9E-31 209.6 13.1 162 73-253 104-273 (276)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.3E-26 4.5E-31 207.0 10.3 150 111-280 4-163 (239)
81 3c5r_A BARD-1, BRCA1-associate 99.9 1.1E-26 3.9E-31 188.9 8.6 128 108-254 6-133 (137)
82 2vge_A RELA-associated inhibit 99.9 4.6E-26 1.6E-30 202.2 11.0 132 108-256 17-149 (229)
83 3t8k_A Uncharacterized protein 99.9 2.6E-26 8.8E-31 197.1 8.4 126 110-254 36-178 (186)
84 2vge_A RELA-associated inhibit 99.9 3.3E-28 1.1E-32 216.0 -5.1 169 66-249 20-207 (229)
85 3aaa_C Myotrophin, protein V-1 99.9 3.4E-25 1.2E-29 176.7 12.9 110 109-221 4-113 (123)
86 3ehr_A Osteoclast-stimulating 99.9 1.5E-25 5.2E-30 197.6 10.0 130 108-256 69-199 (222)
87 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.1E-24 3.9E-29 182.0 13.5 153 71-255 9-162 (162)
88 3t8k_A Uncharacterized protein 99.9 3.9E-25 1.3E-29 189.7 7.6 151 112-278 6-176 (186)
89 3ui2_A Signal recognition part 99.9 1.1E-24 3.7E-29 195.3 8.9 201 111-359 14-238 (244)
90 2aja_A Ankyrin repeat family p 99.9 1.5E-25 5.2E-30 212.7 3.2 166 76-279 74-248 (376)
91 2b0o_E UPLC1; arfgap, structur 99.9 5.3E-24 1.8E-28 196.6 12.7 138 112-268 151-298 (301)
92 1d9s_A Cyclin-dependent kinase 99.9 9.3E-24 3.2E-28 171.5 11.9 124 137-278 2-133 (136)
93 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.4E-23 8.3E-28 157.4 12.3 93 111-206 1-93 (93)
94 1dcq_A PYK2-associated protein 99.9 5E-23 1.7E-27 187.9 16.5 124 113-255 131-263 (278)
95 1sw6_A Regulatory protein SWI6 99.9 8.5E-24 2.9E-28 197.7 11.0 166 105-278 45-305 (327)
96 1bi7_B P16INK4A, MTS1, multipl 99.9 2.4E-24 8E-29 179.3 6.3 136 70-221 15-151 (156)
97 3lvq_E ARF-GAP with SH3 domain 99.9 5.6E-23 1.9E-27 202.9 15.8 126 113-257 133-267 (497)
98 3jue_A Arfgap with coiled-coil 99.9 5.6E-23 1.9E-27 194.3 14.2 127 111-256 198-327 (368)
99 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.3E-22 4.3E-27 153.5 12.4 93 146-255 1-93 (93)
100 2l6b_A NR1C; ankyrin, consensu 99.9 2.1E-23 7.2E-28 164.2 7.8 108 108-218 5-112 (115)
101 2jab_A H10-2-G3; HER2, darpin, 99.9 9E-22 3.1E-26 159.7 14.4 124 66-204 13-136 (136)
102 2aja_A Ankyrin repeat family p 99.9 1.2E-24 4.1E-29 206.5 -3.5 168 69-272 94-270 (376)
103 3c5r_A BARD-1, BRCA1-associate 99.9 7.7E-23 2.6E-27 166.2 6.6 121 138-276 2-129 (137)
104 2b0o_E UPLC1; arfgap, structur 99.9 1.5E-21 5.1E-26 180.2 13.5 134 76-223 159-295 (301)
105 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.8E-21 9.6E-26 153.8 12.5 113 80-206 14-126 (126)
106 3lvq_E ARF-GAP with SH3 domain 99.8 1.4E-20 4.8E-25 185.8 15.0 132 72-211 136-270 (497)
107 1dcq_A PYK2-associated protein 99.8 8.1E-20 2.8E-24 166.6 18.0 133 67-207 129-264 (278)
108 3aaa_C Myotrophin, protein V-1 99.8 5E-21 1.7E-25 152.4 8.3 95 144-255 4-98 (123)
109 3deo_A Signal recognition part 99.8 1.9E-22 6.6E-27 172.3 -0.1 78 144-223 41-119 (183)
110 2l6b_A NR1C; ankyrin, consensu 99.8 1.7E-20 5.9E-25 147.4 9.2 100 142-258 4-103 (115)
111 3jue_A Arfgap with coiled-coil 99.8 1.3E-19 4.3E-24 171.4 14.9 143 69-223 201-346 (368)
112 3ehr_A Osteoclast-stimulating 99.8 9.2E-21 3.1E-25 166.9 6.4 121 81-215 86-207 (222)
113 2zgd_A 3 repeat synthetic anky 99.8 7.5E-20 2.6E-24 142.7 10.5 94 104-200 16-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 2.6E-19 8.9E-24 139.6 10.6 94 139-249 16-109 (110)
115 1x3p_A Cpsrp43; chromo-2 domai 98.8 7.1E-10 2.4E-14 72.9 0.1 47 310-356 4-51 (54)
116 3f2u_A Chromobox protein homol 98.5 6E-09 2.1E-13 69.1 -1.3 46 310-356 6-54 (55)
117 2k1b_A Chromobox protein homol 98.5 1.1E-08 3.8E-13 71.5 -0.5 49 305-355 21-72 (73)
118 2dnv_A Chromobox protein homol 98.5 1.6E-08 5.5E-13 69.2 0.3 46 310-356 14-62 (64)
119 3fdt_A Chromobox protein homol 98.5 4.6E-09 1.6E-13 70.7 -2.8 48 310-358 7-57 (59)
120 2rsn_A Chromo domain-containin 98.5 3.8E-08 1.3E-12 69.4 1.4 50 305-355 21-74 (75)
121 1q3l_A Heterochromatin protein 98.4 1.1E-08 3.8E-13 70.7 -2.0 49 306-356 17-68 (69)
122 3mts_A Histone-lysine N-methyl 98.4 9.5E-08 3.2E-12 65.1 2.3 47 310-357 4-53 (64)
123 3i91_A Chromobox protein homol 98.4 5.8E-08 2E-12 64.1 0.7 44 310-354 7-53 (54)
124 1pdq_A Polycomb protein; methy 98.4 4.3E-08 1.5E-12 68.2 0.1 49 305-355 20-71 (72)
125 1g6z_A CLR4 protein; transfera 98.4 4.6E-08 1.6E-12 68.3 0.0 48 310-357 12-64 (70)
126 1pfb_A Polycomb protein; chrom 98.4 6.1E-08 2.1E-12 64.2 0.4 45 310-355 7-54 (55)
127 2rso_A Chromatin-associated pr 98.3 7.1E-08 2.4E-12 70.9 0.3 51 305-356 30-86 (92)
128 3h91_A Chromobox protein homol 98.3 9.1E-08 3.1E-12 63.1 0.4 44 310-354 7-53 (54)
129 2dnt_A Chromodomain protein, Y 98.3 1.2E-07 4E-12 67.7 0.5 47 310-356 17-67 (78)
130 2d9u_A Chromobox protein homol 98.3 1.1E-07 3.7E-12 67.1 0.3 48 310-358 14-64 (74)
131 1ap0_A Modifier protein 1; chr 98.2 3.8E-07 1.3E-11 64.1 2.1 47 310-357 17-66 (73)
132 3g7l_A Chromo domain-containin 98.2 2.8E-07 9.7E-12 62.3 1.3 46 310-356 11-60 (61)
133 3lwe_A M-phase phosphoprotein 98.2 6.4E-08 2.2E-12 65.7 -2.2 48 310-358 8-59 (62)
134 2kvm_A Chromobox protein homol 98.2 5.3E-07 1.8E-11 63.6 2.4 47 310-357 17-66 (74)
135 4hae_A CDY-like 2, chromodomai 98.2 6.7E-09 2.3E-13 74.4 -7.9 51 304-355 22-76 (81)
136 2epb_A Chromodomain-helicase-D 98.1 6.7E-07 2.3E-11 61.7 1.8 46 310-355 15-67 (68)
137 2ee1_A Chromodomain helicase-D 97.8 1.3E-05 4.6E-10 54.1 2.7 45 309-353 14-63 (64)
138 2b2y_C CHD-1, chromodomain-hel 97.5 2.1E-05 7.1E-10 59.3 0.6 53 304-358 35-101 (115)
139 2h1e_A Chromo domain protein 1 95.9 0.00034 1.2E-08 58.0 -3.5 48 306-353 120-176 (177)
140 2b2y_A CHD-1, chromodomain-hel 95.9 0.00054 1.8E-08 57.3 -2.5 50 306-355 130-186 (187)
141 2b2y_A CHD-1, chromodomain-hel 94.5 0.0084 2.9E-07 50.0 0.8 51 305-357 36-100 (187)
142 3mwy_W Chromo domain-containin 91.9 0.0064 2.2E-07 63.0 -5.0 39 305-344 37-95 (800)
143 3kup_A Chromobox protein homol 90.6 0.047 1.6E-06 36.8 -0.1 44 310-354 16-62 (65)
144 2h1e_A Chromo domain protein 1 90.1 0.047 1.6E-06 45.0 -0.4 36 321-356 45-86 (177)
145 2fmm_A Chromobox protein homol 89.0 0.054 1.8E-06 37.6 -0.8 45 310-355 19-66 (74)
146 3i3c_A Chromobox protein homol 86.2 0.067 2.3E-06 37.1 -1.6 44 310-354 26-72 (75)
147 3q6s_A Chromobox protein homol 84.1 0.15 5.1E-06 35.7 -0.7 45 310-355 13-60 (78)
148 3p7j_A Heterochromatin protein 76.6 0.38 1.3E-05 34.3 -0.7 44 310-354 29-75 (87)
149 1gp8_A Protein (scaffolding pr 28.5 37 0.0013 19.7 2.0 19 115-133 16-34 (40)
150 2dag_A Ubiquitin carboxyl-term 22.0 1.8E+02 0.006 19.6 5.0 40 242-281 9-51 (74)
151 3zrh_A Ubiquitin thioesterase 21.0 2.3E+02 0.0077 26.3 6.8 50 118-169 28-91 (454)
No 1
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=100.00 E-value=3.6e-38 Score=283.21 Aligned_cols=229 Identities=72% Similarity=1.220 Sum_probs=202.4
Q ss_pred ChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCH
Q 016433 81 ATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSE 160 (389)
Q Consensus 81 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~ 160 (389)
...+.+++.+.++..+.|........+++.+|.||||+||..|+.++++.|++ | +++|.+|..|+||||+||..|+.
T Consensus 14 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~--~~~~~~d~~g~t~L~~A~~~g~~ 90 (244)
T 3ui2_A 14 EGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-D--RDVDAVDENGRTALLFVAGLGSD 90 (244)
T ss_dssp TTEEEEEEEESSCCCCEEEEGGGSCHHHHHHHHHHHHHHHTTTCHHHHHHTTT-T--CCTTCBCTTSCBHHHHHHHHTCH
T ss_pred CCccHHHHHHHcCCCcccccccccccccccCCCCHHHHHHHcCCHHHHHHHHc-C--CCCCCcCCCCCCHHHHHHHCCCH
Confidence 45566677777888888877777778888899999999999999999999999 7 99999999999999999999999
Q ss_pred HHHHHHHhcCCCccccc-CCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHH
Q 016433 161 ACVRVLAEAGTDLNHRD-SGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARR 239 (389)
Q Consensus 161 ~~v~~Ll~~ga~~~~~d-~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~ 239 (389)
++|++|+++|+++|.++ .. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+.....+.|||++|+.
T Consensus 91 ~~v~~Ll~~ga~~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~ 169 (244)
T 3ui2_A 91 KCVRLLAEAGADLDHRDMRG-GLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRR 169 (244)
T ss_dssp HHHHHHHHTTCCTTCCCSSS-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHH
T ss_pred HHHHHHHHcCCCCCcCCCCC-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHH
Confidence 99999999999999999 66 99999999999999999999999999999999999999999999999999999999999
Q ss_pred hCcHHHHHHHHHcccChHHHHHHHHHcCChhHHHHHHhccCCCCCcchhcccccchhhhhhhhhhHHHHHHhhh
Q 016433 240 LGLEAVIRNLEEAVFEYAEVQEILEKRGKGDQLEYLVKWRDGGDNEWVKVGFIAEDLVTDYEAGLEYAVAEGVL 313 (389)
Q Consensus 240 ~g~~~~v~~Ll~~g~~~~~~~~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~v~e~il 313 (389)
.|+.+++++|++.+.+......+....+.....+||.+|.+.....|.+...+.++++.+++.+.+++..+.++
T Consensus 170 ~g~~~iv~~L~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~~~~~w~~~~~i~~~li~~y~~~~~~~~~~~v~ 243 (244)
T 3ui2_A 170 IGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVI 243 (244)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEESCTTSCEEEEEESSSSCEEEEESTTBCHHHHHHHHHHHC--------
T ss_pred cChHHHHHHHHHhccccccHHHHHHHhccCcchhhhhhhcCCCCCCcCcchhcCHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999987766555555556677778899999999999999999998899999999999988766665
No 2
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.5e-32 Score=247.63 Aligned_cols=169 Identities=25% Similarity=0.273 Sum_probs=156.7
Q ss_pred cccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCC-CcccccCCCCccHHH
Q 016433 108 VVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGT-DLNHRDSGGGLTALH 186 (389)
Q Consensus 108 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga-~~~~~d~~~g~tpLh 186 (389)
.+..|.||||+||..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|++.|+ +++..+.. |.||||
T Consensus 53 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~-g~t~L~ 129 (253)
T 1yyh_A 53 TDRTGETALHLAARYSRSDAAKRLLEAS--ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHD-GTTPLI 129 (253)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTT-CCCHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCC-CCcHHH
Confidence 3678999999999999999999999999 9999999999999999999999999999999987 99999999 999999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHH---------h--------ccCCCCCHHHHHHHhCcHHHHHHH
Q 016433 187 MAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEI---------L--------RVTPKGNPMQFARRLGLEAVIRNL 249 (389)
Q Consensus 187 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~---------~--------~~~~g~t~l~~A~~~g~~~~v~~L 249 (389)
+|+..|+.+++++|+++|++++.+|..|+||||+|+.. + .+..|.||||+|+..|+.+++++|
T Consensus 130 ~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~L 209 (253)
T 1yyh_A 130 LAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVL 209 (253)
T ss_dssp HHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHH
Confidence 99999999999999999999999999999999999862 2 235789999999999999999999
Q ss_pred HHcccC-------hHHHHHHHHHcCChhHHHHHHhcc
Q 016433 250 EEAVFE-------YAEVQEILEKRGKGDQLEYLVKWR 279 (389)
Q Consensus 250 l~~g~~-------~~~~~~~a~~~g~~~~~~~L~~~~ 279 (389)
+++|++ +.++.++|..+|+.+++++|....
T Consensus 210 l~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 210 LDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp HHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred HHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 999985 468999999999999999998643
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=2.8e-32 Score=230.57 Aligned_cols=156 Identities=34% Similarity=0.427 Sum_probs=132.5
Q ss_pred HHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHH
Q 016433 72 IIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTAL 151 (389)
Q Consensus 72 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~L 151 (389)
++.+...+..++|++|++.+ .+.+..+.+|.||||+|+..|+.++++.|++.| ++++.+|..|+|||
T Consensus 8 L~~Aa~~G~~~~v~~Ll~~G-----------advn~~d~~g~t~l~~a~~~~~~~~~~~ll~~g--ad~~~~d~~g~TpL 74 (169)
T 4gpm_A 8 LIEAAENGNKDRVKDLIENG-----------ADVNASDSDGRTPLHHAAENGHKEVVKLLISKG--ADVNAKDSDGRTPL 74 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTT-----------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHH
T ss_pred HHHHHHcCCHHHHHHHHHCC-----------CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcc--cchhhhccCCCCHH
Confidence 33444455699999999865 233445678999999999999999999999998 99999999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCC
Q 016433 152 LFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKG 231 (389)
Q Consensus 152 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~ 231 (389)
|+|+..|+.++|++|+++|+++|.+|.. |+||||+|+..|+.++|++|+++|++++.+|.+|+||||+
T Consensus 75 h~A~~~g~~~~v~~Ll~~gadvn~~d~~-G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~----------- 142 (169)
T 4gpm_A 75 HHAAENGHKEVVKLLISKGADVNAKDSD-GRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDL----------- 142 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH-----------
T ss_pred HHHHHcCCHHHHHHHHHCcCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH-----------
Confidence 9999999999999999999999999999 9999999999999999999999999999999888887665
Q ss_pred CHHHHHHHhCcHHHHHHHHHcccChH
Q 016433 232 NPMQFARRLGLEAVIRNLEEAVFEYA 257 (389)
Q Consensus 232 t~l~~A~~~g~~~~v~~Ll~~g~~~~ 257 (389)
|+..|+.+||++|+++|++..
T Consensus 143 -----A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 143 -----AREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp -----HHHTTCHHHHHHHHTC-----
T ss_pred -----HHHcCCHHHHHHHHHCCCCcC
Confidence 556999999999999999754
No 4
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=4.9e-31 Score=222.91 Aligned_cols=147 Identities=33% Similarity=0.451 Sum_probs=138.2
Q ss_pred hHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCC
Q 016433 114 SPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVK 193 (389)
Q Consensus 114 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~ 193 (389)
++|+.||..|+.++|+.||+.| +++|.+|..|+||||+|+..++.+++++|+++|++++.+|.. |+||||+|+..|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~G--advn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~-g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENG--ADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSD-GRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccC-CCCHHHHHHHcCC
Confidence 5799999999999999999999 999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHHHHHc
Q 016433 194 PGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEILEKR 266 (389)
Q Consensus 194 ~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a~~~ 266 (389)
.+++++|+++|++++.+|.+|+||||+ |+..|+.++|++|++.|++ +.+|.++|+..
T Consensus 83 ~~~v~~Ll~~gadvn~~d~~G~TpLh~----------------A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~ 146 (169)
T 4gpm_A 83 KEVVKLLISKGADVNAKDSDGRTPLHH----------------AAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREH 146 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHH----------------HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHHCcCCCCCCCCCCCCHHHH----------------HHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 999999999999999999999888666 5569999999999999985 56899999999
Q ss_pred CChhHHHHHHhcc
Q 016433 267 GKGDQLEYLVKWR 279 (389)
Q Consensus 267 g~~~~~~~L~~~~ 279 (389)
|+.+++++|++..
T Consensus 147 g~~~iv~~Ll~~G 159 (169)
T 4gpm_A 147 GNEEVVKLLEKQG 159 (169)
T ss_dssp TCHHHHHHHHTC-
T ss_pred CCHHHHHHHHHCC
Confidence 9999999999753
No 5
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=1.1e-30 Score=239.76 Aligned_cols=169 Identities=20% Similarity=0.225 Sum_probs=156.0
Q ss_pred cccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHH
Q 016433 106 KDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTAL 185 (389)
Q Consensus 106 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpL 185 (389)
...+..|+||||+||..|+.+++++|++.| ++++.+|..|+||||+|+..|+.++|++|+++|++++.+|.. |+|||
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~-g~t~L 129 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGHQLSLRNLISQG--WAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTAD-WHTPL 129 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTCHHHHHHHHHTT--CCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTT-CCCHH
T ss_pred cCCCccCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCC-CCCHH
Confidence 446778999999999999999999999999 999999999999999999999999999999999999999999 99999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHH---------h--------ccCCCCCHHHHHHHhCcHHHHHH
Q 016433 186 HMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEI---------L--------RVTPKGNPMQFARRLGLEAVIRN 248 (389)
Q Consensus 186 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~---------~--------~~~~g~t~l~~A~~~g~~~~v~~ 248 (389)
|+|+..|+.+++++|+++|++++..+ .|.||||+|+.. + .+..|.||||+|+..|+.++|++
T Consensus 130 ~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~ 208 (285)
T 3d9h_A 130 FNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKK 208 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 99999999999999999999998654 599999999862 2 23578899999999999999999
Q ss_pred HHHcccC------hHHHHHHHHHcCChhHHHHHHhc
Q 016433 249 LEEAVFE------YAEVQEILEKRGKGDQLEYLVKW 278 (389)
Q Consensus 249 Ll~~g~~------~~~~~~~a~~~g~~~~~~~L~~~ 278 (389)
|++.|++ +.++.++|+..|+.+++++|++.
T Consensus 209 Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 244 (285)
T 3d9h_A 209 LLESGADVNQGKGQDSPLHAVVRTASEELACLLMDF 244 (285)
T ss_dssp HHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 9999885 45889999999999999999975
No 6
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=5e-31 Score=233.90 Aligned_cols=186 Identities=18% Similarity=0.154 Sum_probs=164.3
Q ss_pred CChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCC
Q 016433 80 DATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGS 159 (389)
Q Consensus 80 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~ 159 (389)
..+.++++++.+. ......+..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+
T Consensus 18 ~~~~v~~ll~~~~----------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~ 85 (231)
T 3aji_A 18 KLDELKERILADK----------SLATRTDQDSRTALHWACSAGHTEIVEFLLQLG--VPVNDKDDAGWSPLHIAASAGX 85 (231)
T ss_dssp CHHHHHHHHHHCG----------GGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCSCCCCTTSCCHHHHHHHHTC
T ss_pred CHHHHHHHHHhch----------hhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhC--CCCCCcCCCCCCHHHHHHHcCH
Confidence 4777777776532 123345678999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHH---------h-----
Q 016433 160 EACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEI---------L----- 225 (389)
Q Consensus 160 ~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~---------~----- 225 (389)
.+++++|+++|++++.+|.. |.||||+|+..|+.+++++|+++|++++..|..|.||||+|+.. +
T Consensus 86 ~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 164 (231)
T 3aji_A 86 DEIVKALLVKGAHVNAVNQN-GCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAS 164 (231)
T ss_dssp HHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Confidence 99999999999999999999 99999999999999999999999999999999999999999862 1
Q ss_pred ---ccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHHHHHcCChhHHHHHHhc
Q 016433 226 ---RVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEILEKRGKGDQLEYLVKW 278 (389)
Q Consensus 226 ---~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a~~~g~~~~~~~L~~~ 278 (389)
.+..|.||||+|+..|+.+++++|++.|++ +.++.++|...++.+++++|.++
T Consensus 165 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~ 227 (231)
T 3aji_A 165 TNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGE 227 (231)
T ss_dssp SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHccc
Confidence 234688999999999999999999999885 45788888888899999988864
No 7
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=2.2e-30 Score=228.42 Aligned_cols=170 Identities=25% Similarity=0.279 Sum_probs=157.3
Q ss_pred ccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCC-CcccccCCCCccHHHH
Q 016433 109 VAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGT-DLNHRDSGGGLTALHM 187 (389)
Q Consensus 109 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga-~~~~~d~~~g~tpLh~ 187 (389)
+.+|.||||+||..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|++.++ +++..+.. |.||||+
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~-g~t~L~~ 98 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEAS--ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHD-GTTPLIL 98 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTT-CCCHHHH
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC-CCcHHHH
Confidence 678999999999999999999999999 9999999999999999999999999999999987 89999999 9999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH---------Hh--------ccCCCCCHHHHHHHhCcHHHHHHHH
Q 016433 188 AAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKE---------IL--------RVTPKGNPMQFARRLGLEAVIRNLE 250 (389)
Q Consensus 188 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~---------~~--------~~~~g~t~l~~A~~~g~~~~v~~Ll 250 (389)
|+..|+.+++++|+++|++++..|..|.||||+|+. ++ .+..|.||||+|+..|+.+++++|+
T Consensus 99 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 178 (223)
T 2f8y_A 99 AARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLL 178 (223)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHH
Confidence 999999999999999999999999999999999986 12 2357889999999999999999999
Q ss_pred HcccC-------hHHHHHHHHHcCChhHHHHHHhccCC
Q 016433 251 EAVFE-------YAEVQEILEKRGKGDQLEYLVKWRDG 281 (389)
Q Consensus 251 ~~g~~-------~~~~~~~a~~~g~~~~~~~L~~~~~~ 281 (389)
+.|++ +.++.++|...|+.+++++|+++...
T Consensus 179 ~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 179 DHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred HcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 99985 45789999999999999999976543
No 8
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=7.3e-31 Score=250.24 Aligned_cols=195 Identities=17% Similarity=0.210 Sum_probs=99.3
Q ss_pred CChHHHHHHHcCCCCCCccc---------cCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcH
Q 016433 80 DATGMEYLIEWKDGHAPSWV---------PQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTA 150 (389)
Q Consensus 80 ~~~~l~~l~~~~~~~~~~~~---------~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~ 150 (389)
|.+++++++..+......++ ..+...+..+..|.||||+|+..|+.++|++|+++| ++++.+|..|.||
T Consensus 125 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g--a~~~~~~~~g~t~ 202 (373)
T 2fo1_E 125 NRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAG--ADPTIYNKSERSA 202 (373)
T ss_dssp CCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCSCCCCTTCCCH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCC--CCCcccCCCCCCH
Confidence 34555555554444333332 122333334445555555555555555555555555 5555555555555
Q ss_pred HHHHHHcCCHHHHHHHHhcC---CCcccccCCCCccHHHHHHhcC---CHHHHHHHHHcCCCCCC--------CCCCCCc
Q 016433 151 LLFVSGLGSEACVRVLAEAG---TDLNHRDSGGGLTALHMAAGYV---KPGVAKLLLELGADADV--------EDDRGLT 216 (389)
Q Consensus 151 Lh~A~~~g~~~~v~~Ll~~g---a~~~~~d~~~g~tpLh~A~~~g---~~~~v~~Ll~~ga~~~~--------~d~~g~t 216 (389)
||+|+..|+.+++++|+++| ++++..|.. |.||||+|+..+ +.+++++|+++|++++. .|..|.|
T Consensus 203 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~-g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t 281 (373)
T 2fo1_E 203 LHQAAANRDFGMMVYMLNSTKLKGDIEELDRN-GMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRT 281 (373)
T ss_dssp HHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTT-SCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCC
T ss_pred HHHHHHCCCHHHHHHHHhcCccccChhhcCCC-CCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCC
Confidence 55555555555555555554 455555555 555555555554 45555555555555543 3445555
Q ss_pred HHHHHHH---------Hh---------ccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHHHHHcCChhH
Q 016433 217 PLALAKE---------IL---------RVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEILEKRGKGDQ 271 (389)
Q Consensus 217 pL~~A~~---------~~---------~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a~~~g~~~~ 271 (389)
|||+|+. ++ .+..|.||||+|+..|+.++|++|+++|++ +.++.++|+..|+.++
T Consensus 282 ~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~i 361 (373)
T 2fo1_E 282 ALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNI 361 (373)
T ss_dssp THHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHH
Confidence 5555542 11 112344555555555555555555555543 2245555555555555
Q ss_pred HHHHHh
Q 016433 272 LEYLVK 277 (389)
Q Consensus 272 ~~~L~~ 277 (389)
+++|++
T Consensus 362 v~~Ll~ 367 (373)
T 2fo1_E 362 VDIFDR 367 (373)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 555554
No 9
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=8.6e-31 Score=239.09 Aligned_cols=170 Identities=22% Similarity=0.196 Sum_probs=150.2
Q ss_pred cccCCChHHHHHHHcCCHHHHHHHHHhCCCCC---ccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccH
Q 016433 108 VVAEYESPWWTAAKKADDAALKEIIEAGDGRD---VDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTA 184 (389)
Q Consensus 108 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tp 184 (389)
.+.+|+||||+||..|+.++|++|++.| ++ ++.+|..|+||||+|+..|+.++|++|+++|++++.+|.. |+||
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~-g~tp 81 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLGFS--AGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERG-GHTA 81 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHH--TTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTT-SCCH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcC--CCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCCH
Confidence 5678999999999999999999999988 66 8889999999999999999999999999999999999998 9999
Q ss_pred HHHHHhcCCHHHHHHHHHcCCC-----------------------------------------------CCCCCCCCCcH
Q 016433 185 LHMAAGYVKPGVAKLLLELGAD-----------------------------------------------ADVEDDRGLTP 217 (389)
Q Consensus 185 Lh~A~~~g~~~~v~~Ll~~ga~-----------------------------------------------~~~~d~~g~tp 217 (389)
||+|+..|+.+++++|+++|++ ++..|..|.||
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~ 161 (282)
T 1oy3_D 82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP 161 (282)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCH
T ss_pred HHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCH
Confidence 9999999999999999988765 67788899999
Q ss_pred HHHHHH---------Hhc--------c-CCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHHHHHcCChhHH
Q 016433 218 LALAKE---------ILR--------V-TPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEILEKRGKGDQL 272 (389)
Q Consensus 218 L~~A~~---------~~~--------~-~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a~~~g~~~~~ 272 (389)
||+|+. ++. + ..|.||||+|+..|+.++|++|++.|++ +.++.++|+..|+.+++
T Consensus 162 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v 241 (282)
T 1oy3_D 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILA 241 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHH
Confidence 999986 111 1 2388999999999999999999999885 45789999999999999
Q ss_pred HHHHhccC
Q 016433 273 EYLVKWRD 280 (389)
Q Consensus 273 ~~L~~~~~ 280 (389)
++|+++..
T Consensus 242 ~~Ll~~ga 249 (282)
T 1oy3_D 242 RLLRAHGA 249 (282)
T ss_dssp HHHHHTTC
T ss_pred HHHHHcCC
Confidence 99997543
No 10
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=1.4e-31 Score=238.76 Aligned_cols=168 Identities=23% Similarity=0.245 Sum_probs=121.7
Q ss_pred cccCCChHHHHHHHcCCHHHHHHHHH----hCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCcc
Q 016433 108 VVAEYESPWWTAAKKADDAALKEIIE----AGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLT 183 (389)
Q Consensus 108 ~~~~g~t~L~~A~~~g~~~~v~~Ll~----~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~t 183 (389)
.|.+|.||||+||..|+.+++++|++ .+ .+++.+|..|.||||+|+..|+.+++++|+++|++++..+.. |.|
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t 81 (241)
T 1k1a_A 5 ADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGG--RELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRH-GQT 81 (241)
T ss_dssp --CTTCCHHHHHHHTTCHHHHHHHHHHHHHTT--CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcC--CCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCC-CCC
Confidence 45667777777777777777777775 45 677777777777777777777777777777777777777777 777
Q ss_pred HHHHHHhcCCHHHHHHHHHcCC----CCCCCCCCCCcHHHHHHHH---------hc--------c-CCCCCHHHHHHHhC
Q 016433 184 ALHMAAGYVKPGVAKLLLELGA----DADVEDDRGLTPLALAKEI---------LR--------V-TPKGNPMQFARRLG 241 (389)
Q Consensus 184 pLh~A~~~g~~~~v~~Ll~~ga----~~~~~d~~g~tpL~~A~~~---------~~--------~-~~g~t~l~~A~~~g 241 (389)
|||+|+..|+.+++++|++.|+ +++..|..|.||||+|+.. +. + ..|.||||+|+..|
T Consensus 82 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~ 161 (241)
T 1k1a_A 82 AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENN 161 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcC
Confidence 7777777777777777777766 6777777777777777641 11 1 34677777788888
Q ss_pred cHHHHHHHHHcccC-------hHHHHHHHHHcCChhHHHHHHhc
Q 016433 242 LEAVIRNLEEAVFE-------YAEVQEILEKRGKGDQLEYLVKW 278 (389)
Q Consensus 242 ~~~~v~~Ll~~g~~-------~~~~~~~a~~~g~~~~~~~L~~~ 278 (389)
+.+++++|++.|++ +.++.++|+..|+.+++++|++.
T Consensus 162 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 205 (241)
T 1k1a_A 162 SLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRS 205 (241)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHT
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 88888888887764 34677778888888888888764
No 11
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=1.4e-29 Score=246.25 Aligned_cols=196 Identities=20% Similarity=0.188 Sum_probs=120.1
Q ss_pred HHHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCC
Q 016433 68 EVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDG 147 (389)
Q Consensus 68 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g 147 (389)
.+..++++...+ .+++++|++.+. .....+..|.||||+||..|+.+++++|++.| +++|.+|..|
T Consensus 15 ~t~L~~Aa~~g~-~~~v~~Ll~~g~-----------~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g 80 (437)
T 1n11_A 15 LTPLHVASFMGH-LPIVKNLLQRGA-----------SPNVSNVKVETPLHMAARAGHTEVAKYLLQNK--AKVNAKAKDD 80 (437)
T ss_dssp CCHHHHHHHHTC-HHHHHHHHHTTC-----------CSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHT--CCSSCCCTTS
T ss_pred CCHHHHHHHCCC-HHHHHHHHHcCC-----------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC--CCCCCCCCCC
Confidence 334444444333 566666665431 11223445667777777777777777777766 6666666667
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHH---
Q 016433 148 RTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEI--- 224 (389)
Q Consensus 148 ~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~--- 224 (389)
+||||+|+..|+.++|++|+++|++++..+.. |.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..
T Consensus 81 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~ 159 (437)
T 1n11_A 81 QTPLHCAARIGHTNMVKLLLENNANPNLATTA-GHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKV 159 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTT-CCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCH
T ss_pred CCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCC-CCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCH
Confidence 77777777777777777777777766666666 66666666666666666666666666666666666666666541
Q ss_pred ------hc--------cCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHHHHHcCChhHHHHHHhc
Q 016433 225 ------LR--------VTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEILEKRGKGDQLEYLVKW 278 (389)
Q Consensus 225 ------~~--------~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a~~~g~~~~~~~L~~~ 278 (389)
+. +..|.||||+|+..|+.++|++|++.|++ +.++.+.|+..|+.+++++|+++
T Consensus 160 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 234 (437)
T 1n11_A 160 RVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQY 234 (437)
T ss_dssp HHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 11 12455666666666666666666666543 23455666666666666666654
No 12
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=3.4e-29 Score=228.38 Aligned_cols=193 Identities=21% Similarity=0.177 Sum_probs=160.4
Q ss_pred HHHHhccCCCCChHHHHHHHcCCCCCCccccCccccccc-ccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCC
Q 016433 70 SKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDV-VAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGR 148 (389)
Q Consensus 70 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~ 148 (389)
..+.++... ..+++++|++.+.. .... +..|.||||+|+..|+.+++++|++.| ++++.+|..|.
T Consensus 8 ~L~~A~~~g-~~~~v~~Ll~~g~~-----------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~ 73 (285)
T 1wdy_A 8 LLIKAVQNE-DVDLVQQLLEGGAN-----------VNFQEEEGGWTPLHNAVQMSREDIVELLLRHG--ADPVLRKKNGA 73 (285)
T ss_dssp HHHHHHHTT-CHHHHHHHHHTTCC-----------TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTCC
T ss_pred HHHHHHHcC-CHHHHHHHHHcCCC-----------cccccCCCCCcHHHHHHHcCCHHHHHHHHHcC--CCCcccCCCCC
Confidence 344444444 48889999986521 1112 467899999999999999999999998 99999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCC----------CCCCCcHH
Q 016433 149 TALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVE----------DDRGLTPL 218 (389)
Q Consensus 149 t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~----------d~~g~tpL 218 (389)
||||+|+..|+.+++++|+++|++++..|.. |+||||+|+..|+.+++++|+++|++++.. +..|.|||
T Consensus 74 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L 152 (285)
T 1wdy_A 74 TPFLLAAIAGSVKLLKLFLSKGADVNECDFY-GFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATAL 152 (285)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCBCTT-CCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCccCcc-cCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHH
Confidence 9999999999999999999999999999999 999999999999999999999999999887 77888999
Q ss_pred HHHHH---------Hhc---------cCCCCCHHHHHHHhCc----HHHHHHHHHcccC-------hHHHHHHHHHcCCh
Q 016433 219 ALAKE---------ILR---------VTPKGNPMQFARRLGL----EAVIRNLEEAVFE-------YAEVQEILEKRGKG 269 (389)
Q Consensus 219 ~~A~~---------~~~---------~~~g~t~l~~A~~~g~----~~~v~~Ll~~g~~-------~~~~~~~a~~~g~~ 269 (389)
|+|+. ++. +..|.||||+|+..|+ .+++++|++.|++ +.++.++|+..|+.
T Consensus 153 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 232 (285)
T 1wdy_A 153 MDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHL 232 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCH
Confidence 98876 221 2357788888888888 8888888888874 45788888888888
Q ss_pred hHHHHHHh
Q 016433 270 DQLEYLVK 277 (389)
Q Consensus 270 ~~~~~L~~ 277 (389)
+++++|++
T Consensus 233 ~~v~~Ll~ 240 (285)
T 1wdy_A 233 GLVQRLLE 240 (285)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88888874
No 13
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=9e-30 Score=226.44 Aligned_cols=202 Identities=22% Similarity=0.198 Sum_probs=173.0
Q ss_pred CChHHHHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCcccc
Q 016433 64 ESYGEVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAV 143 (389)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 143 (389)
+.++....+.++... ..+++++|++.+. .....+..|.||||+|+..|+.+++++|++.| .+++..
T Consensus 6 d~~~~~~l~~A~~~g-~~~~~~~Ll~~g~-----------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~--~~~~~~ 71 (240)
T 3eu9_A 6 DDYSTWDIVKATQYG-IYERCRELVEAGY-----------DVRQPDKENVTLLHWAAINNRIDLVKYYISKG--AIVDQL 71 (240)
T ss_dssp SCGGGCCHHHHHHTT-CHHHHHHHHHTTC-----------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCC
T ss_pred ccccchHHHHHHHcC-ChHHHHHHHHcCC-----------CcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcC--Ccchhh
Confidence 344444555554444 4899999998652 23345678999999999999999999999999 777755
Q ss_pred C-CCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 016433 144 D-NDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAK 222 (389)
Q Consensus 144 d-~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~ 222 (389)
+ ..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++..|..|.||||+|+
T Consensus 72 ~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~ 150 (240)
T 3eu9_A 72 GGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGE-GCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAA 150 (240)
T ss_dssp BTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHH
Confidence 5 45999999999999999999999999999999999 999999999999999999999999999999999999999998
Q ss_pred HH----------h--------cc-CCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHHHHHcCChhHHHHHH
Q 016433 223 EI----------L--------RV-TPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEILEKRGKGDQLEYLV 276 (389)
Q Consensus 223 ~~----------~--------~~-~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a~~~g~~~~~~~L~ 276 (389)
.. + .. ..|.||||+|+..|+.+++++|++.|++ +.++.++|...|+.+++++|+
T Consensus 151 ~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~ 230 (240)
T 3eu9_A 151 YRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQ 230 (240)
T ss_dssp HHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred HhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 52 1 11 2678999999999999999999999986 357899999999999999999
Q ss_pred hccC
Q 016433 277 KWRD 280 (389)
Q Consensus 277 ~~~~ 280 (389)
+...
T Consensus 231 ~~~~ 234 (240)
T 3eu9_A 231 EARQ 234 (240)
T ss_dssp HHC-
T ss_pred Hhhh
Confidence 7643
No 14
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=2.8e-30 Score=229.94 Aligned_cols=149 Identities=27% Similarity=0.346 Sum_probs=74.5
Q ss_pred cCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcC-CCcccccCCCCccHHHHH
Q 016433 110 AEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAG-TDLNHRDSGGGLTALHMA 188 (389)
Q Consensus 110 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~~g~tpLh~A 188 (389)
..|.||||+|+..|+.+++++|++.| ++++.++..|.||||+|+..|+.+++++|++.| ++++..+.. |.||||+|
T Consensus 42 ~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-g~t~L~~A 118 (237)
T 3b7b_A 42 EDQRTPLMEAAENNHLEAVKYLIKAG--ALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDG-GWTPMIWA 118 (237)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTT--CCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTT-SCCHHHHH
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHhCC--CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCC-CCCHHHHH
Confidence 34445555555555555555555544 444545555555555555555555555555544 444444444 55555555
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHH
Q 016433 189 AGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQE 261 (389)
Q Consensus 189 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~ 261 (389)
+..|+.+++++|+++|++++.+|..|.|||| +|+..|+.+++++|++.|++ +.++.+
T Consensus 119 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~----------------~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 182 (237)
T 3b7b_A 119 TEYKHVDLVKLLLSKGSDINIRDNEENICLH----------------WAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLH 182 (237)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH----------------HHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCccCCCCCCHHH----------------HHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 5555555555555555555555555555554 45555555555555554442 234445
Q ss_pred HHHHcCChhHHHHHHh
Q 016433 262 ILEKRGKGDQLEYLVK 277 (389)
Q Consensus 262 ~a~~~g~~~~~~~L~~ 277 (389)
+|+..|+.+++++|++
T Consensus 183 ~A~~~~~~~~v~~Ll~ 198 (237)
T 3b7b_A 183 IAARENRYDCVVLFLS 198 (237)
T ss_dssp HHHHTTCHHHHHHHHT
T ss_pred HHHHhCCHhHHHHHHH
Confidence 5555555555555543
No 15
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.97 E-value=1.9e-31 Score=228.55 Aligned_cols=169 Identities=72% Similarity=1.217 Sum_probs=159.4
Q ss_pred CChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCC
Q 016433 80 DATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGS 159 (389)
Q Consensus 80 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~ 159 (389)
+.+.++++++++.+..+.|........+.+.+|.||||+||..|+.++++.|++ | +++|.+|..|+||||+|+..|+
T Consensus 12 ~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~--~~~~~~d~~g~t~L~~A~~~~~ 88 (183)
T 3deo_A 12 GEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-D--RDVDAVDENGRTALLFVAGLGS 88 (183)
T ss_dssp TTTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCHHHHHHHTT-T--SCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHHHcCCHHHHHHHHh-c--CCCCCcCCCCCCHHHHHHHcCC
Confidence 466677888888888888888877788888999999999999999999999999 7 9999999999999999999999
Q ss_pred HHHHHHHHhcCCCccccc-CCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHH
Q 016433 160 EACVRVLAEAGTDLNHRD-SGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFAR 238 (389)
Q Consensus 160 ~~~v~~Ll~~ga~~~~~d-~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~ 238 (389)
.+++++|+++|+++|.++ .. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|++......+.+||++|+
T Consensus 89 ~~~v~~Ll~~ga~~~~~~~~~-g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~ 167 (183)
T 3deo_A 89 DKCVRLLAEAGADLDHRDMRG-GLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGR 167 (183)
T ss_dssp HHHHHHHHHTTCCTTCCCSSS-SCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCCCSHHHHHH
T ss_pred HHHHHHHHHcCCCCCcCCCCC-CCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCcccccHHHHHH
Confidence 999999999999999999 77 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCcHHHHHHHHHc
Q 016433 239 RLGLEAVIRNLEEA 252 (389)
Q Consensus 239 ~~g~~~~v~~Ll~~ 252 (389)
..|+.+++++|.+.
T Consensus 168 ~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 168 RIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HcCHHHHHHHHHHh
Confidence 99999999999765
No 16
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=8.5e-30 Score=239.57 Aligned_cols=195 Identities=21% Similarity=0.185 Sum_probs=150.5
Q ss_pred HHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCc
Q 016433 70 SKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRT 149 (389)
Q Consensus 70 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t 149 (389)
..+.+++.. +.+.+..++... .......+..|.||||+||..|+.+++++|+++| ++++.+|..|+|
T Consensus 27 ~L~~A~~~g-~~~~v~~ll~~~----------~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t 93 (351)
T 3utm_A 27 ELLEAARSG-NEEKLMALLTPL----------NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHG--ADVHAKDKGGLV 93 (351)
T ss_dssp HHHHHHHHT-CHHHHHHHCCTT----------TTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTCCC
T ss_pred hHHHHHHcC-CHHHHHHHHHhc----------CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCccCCCCCc
Confidence 344444433 366666665421 2334455678999999999999999999999999 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCC--------------
Q 016433 150 ALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGL-------------- 215 (389)
Q Consensus 150 ~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~-------------- 215 (389)
|||+|+..|+.+++++|+++|++++..|.. |.||||+|+..|+.+++++|+++|++++..+..|.
T Consensus 94 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~ 172 (351)
T 3utm_A 94 PLHNACSYGHYEVTELLLKHGACVNAMDLW-QFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRER 172 (351)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHCCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHH
Confidence 999999999999999999999999999999 99999999999999999999999999988775554
Q ss_pred ----------------------------------------cHHHHHHHH------------h--------ccCCCCCHHH
Q 016433 216 ----------------------------------------TPLALAKEI------------L--------RVTPKGNPMQ 235 (389)
Q Consensus 216 ----------------------------------------tpL~~A~~~------------~--------~~~~g~t~l~ 235 (389)
||||+|+.. + .+..|.||||
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 252 (351)
T 3utm_A 173 LTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLH 252 (351)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred HHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHH
Confidence 555555431 1 1234566777
Q ss_pred HHHHhCcHHHHHHHHHcccC-------hHHHHHHHHHcCChhHHHHHHhc
Q 016433 236 FARRLGLEAVIRNLEEAVFE-------YAEVQEILEKRGKGDQLEYLVKW 278 (389)
Q Consensus 236 ~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a~~~g~~~~~~~L~~~ 278 (389)
+|+..|+.++|++|++.|++ +.++.++|+..|+.+++++|+++
T Consensus 253 ~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 302 (351)
T 3utm_A 253 VAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSY 302 (351)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 77777777777777666654 24566666666777777766654
No 17
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=3.8e-31 Score=240.75 Aligned_cols=203 Identities=22% Similarity=0.264 Sum_probs=137.2
Q ss_pred ChHHHHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHH-HHHHHHHhCCCCCcccc
Q 016433 65 SYGEVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDA-ALKEIIEAGDGRDVDAV 143 (389)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~g~~~~~~~~ 143 (389)
.+..+..++.+...+..++|++|++.+...... ........+..|.||||.|+..+..+ +++.|++.| +++|.+
T Consensus 8 d~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~---~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~G--advn~~ 82 (269)
T 4b93_B 8 DYREVEKLLRAVADGDLEMVRYLLEWTEEDLED---AEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASG--LGVNVT 82 (269)
T ss_dssp CCHHHHHHHHHHHTTCHHHHHHHHTCC-------------------------------------------CC--CCTTCC
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCccccc---ccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCC--CCCCCc
Confidence 344555555555566699999999876422111 11223345668899999999888764 788999998 999999
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH
Q 016433 144 DNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKE 223 (389)
Q Consensus 144 d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~ 223 (389)
|.+|+||||+||..|+.++|++|++.|++++..+.. |.||+|+|+..++.+++++|+++|++++.+|..|+||||+|+.
T Consensus 83 d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~ 161 (269)
T 4b93_B 83 SQDGSSPLHVAALHGRADLIPLLLKHGANAGARNAD-QAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACS 161 (269)
T ss_dssp CTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTT-CCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCC-CCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999986
Q ss_pred ---------Hh--------ccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHHHHHcCChhHHHHH
Q 016433 224 ---------IL--------RVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEILEKRGKGDQLEYL 275 (389)
Q Consensus 224 ---------~~--------~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a~~~g~~~~~~~L 275 (389)
++ .+..|.||||+|+..|+.++|++|+++|++ +.+|.++|+.+| +++++|
T Consensus 162 ~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~--~i~~lL 235 (269)
T 4b93_B 162 GGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNS--KIMELL 235 (269)
T ss_dssp TTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTC--HHHHHT
T ss_pred CCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCC--cHHHHH
Confidence 12 234678899999999999999999999875 446677776555 355544
No 18
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=6.7e-30 Score=231.45 Aligned_cols=164 Identities=20% Similarity=0.241 Sum_probs=106.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHh
Q 016433 111 EYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAG 190 (389)
Q Consensus 111 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~ 190 (389)
+|+||||+||..|+.+++++|++.| +++|.+|..|.||||+|+..|+.+++++|+++|++++.+|.. |+||||+|+.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~ 78 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQG--WAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTAD-WHTPLFNACV 78 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT--CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCCHHHHHHH
Confidence 3566666666666666666666666 666666666666666666666666666666666666666666 6666666666
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHH---------h--------ccCCCCCHHHHHHHhCcHHHHHHHHHcc
Q 016433 191 YVKPGVAKLLLELGADADVEDDRGLTPLALAKEI---------L--------RVTPKGNPMQFARRLGLEAVIRNLEEAV 253 (389)
Q Consensus 191 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~---------~--------~~~~g~t~l~~A~~~g~~~~v~~Ll~~g 253 (389)
.|+.+++++|+++|++++. +.+|.||||+|+.. + .+..|.||||+|+..|+.+++++|++.|
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 157 (261)
T 2xai_A 79 SGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESG 157 (261)
T ss_dssp HTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 6666666666666666654 33466666666541 1 1234556677777777777777777766
Q ss_pred cC------hHHHHHHHHHcCChhHHHHHHhc
Q 016433 254 FE------YAEVQEILEKRGKGDQLEYLVKW 278 (389)
Q Consensus 254 ~~------~~~~~~~a~~~g~~~~~~~L~~~ 278 (389)
++ +.++.++|+..|+.+++++|++.
T Consensus 158 ~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~ 188 (261)
T 2xai_A 158 ADVNQGKGQDSPLHAVARTASEELACLLMDF 188 (261)
T ss_dssp CCTTCCBTTBCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCCCCCCCCCChHHHHHHcCCHHHHHHHHHc
Confidence 64 34666677777777777777654
No 19
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=1.8e-30 Score=235.29 Aligned_cols=191 Identities=20% Similarity=0.195 Sum_probs=162.0
Q ss_pred HHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCc
Q 016433 70 SKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRT 149 (389)
Q Consensus 70 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t 149 (389)
..+.++... ..+++++|++.+ ...+..+.+|.||||+|+..|+.+++++|+++| ++++.+|..|+|
T Consensus 6 ~L~~A~~~g-~~~~v~~Ll~~g-----------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t 71 (261)
T 2xai_A 6 PMHEAAIHG-HQLSLRNLISQG-----------WAVNIITADHVSPLHEACLGGHLSCVKILLKHG--AQVNGVTADWHT 71 (261)
T ss_dssp HHHHHHHHT-CHHHHHHHHHTT-----------CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCC
T ss_pred HHHHHHHcC-CHHHHHHHHHCC-----------CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCCCCCCCC
Confidence 334444433 367777777654 233455678999999999999999999999999 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH------
Q 016433 150 ALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKE------ 223 (389)
Q Consensus 150 ~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~------ 223 (389)
|||+|+..|+.+++++|+++|++++.. .. |.||||+|+..|+.+++++|+++|++++..|..|.||||+|+.
T Consensus 72 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 149 (261)
T 2xai_A 72 PLFNACVSGSWDCVNLLLQHGASVQPE-SD-LASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRAC 149 (261)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSCS-CT-TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCC-CC-CCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHH
Confidence 999999999999999999999999864 45 8999999999999999999999999999999999999999986
Q ss_pred ---Hh-------ccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHHHHHcCChhHHHHHHhc
Q 016433 224 ---IL-------RVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEILEKRGKGDQLEYLVKW 278 (389)
Q Consensus 224 ---~~-------~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a~~~g~~~~~~~L~~~ 278 (389)
++ .+..|.||||+|+..|+.++|++|++.|++ +.++.++|... .+++++|++.
T Consensus 150 v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~--~~~~~~ll~~ 219 (261)
T 2xai_A 150 VKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPE--SPLAQLFLER 219 (261)
T ss_dssp HHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT--CTHHHHHHHC
T ss_pred HHHHHHcCCCCCCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccc--ccHHHHHHhc
Confidence 12 234678999999999999999999999986 44667777644 4588888865
No 20
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=1.8e-30 Score=230.52 Aligned_cols=114 Identities=26% Similarity=0.233 Sum_probs=85.2
Q ss_pred cccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCc-----cccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccC--
Q 016433 106 KDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDV-----DAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDS-- 178 (389)
Q Consensus 106 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-----~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~-- 178 (389)
...+..|.||||+|+..|+.+++++|++.| +++ +.+|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 31 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 108 (232)
T 2rfa_A 31 HQRGAMGETALHIAALYDNLEAAMVLMEAA--PELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGS 108 (232)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHC--GGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSG
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHcC--chhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCc
Confidence 344567777777777777777777777777 555 55666777777777777777777777777777777654
Q ss_pred -----------CCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 016433 179 -----------GGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAK 222 (389)
Q Consensus 179 -----------~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~ 222 (389)
. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 109 ~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~ 162 (232)
T 2rfa_A 109 VFHYRPHNLIYY-GEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILI 162 (232)
T ss_dssp GGSCCTTCSCCC-CSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ceeecccccccC-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 5 777777777777777777777777777777777777776665
No 21
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=4.1e-30 Score=228.23 Aligned_cols=166 Identities=23% Similarity=0.199 Sum_probs=151.5
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHh-CCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc-----ccccCCCCccH
Q 016433 111 EYESPWWTAAKKADDAALKEIIEA-GDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDL-----NHRDSGGGLTA 184 (389)
Q Consensus 111 ~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~-----~~~d~~~g~tp 184 (389)
.|+||||+|+..|+.++++.|++. | ++++.+|..|+||||+|+..|+.+++++|+++|+++ +..|.. |+||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~-g~t~ 78 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEG--CEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYE-GQTA 78 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTC--SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTT-TCCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcC--CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCC-CcCH
Confidence 489999999999999999999998 7 999999999999999999999999999999999987 677778 9999
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCCC-------------CCCcHHHHHHHH---------h--------ccCCCCCHH
Q 016433 185 LHMAAGYVKPGVAKLLLELGADADVEDD-------------RGLTPLALAKEI---------L--------RVTPKGNPM 234 (389)
Q Consensus 185 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~-------------~g~tpL~~A~~~---------~--------~~~~g~t~l 234 (389)
||+|+..|+.+++++|+++|++++..+. .|.||||+|+.. + .+..|.|||
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L 158 (232)
T 2rfa_A 79 LHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVL 158 (232)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 9999999999999999999999998876 799999999862 2 245788999
Q ss_pred HHHHHhCcHHHH----HHHHHcccC-------------hHHHHHHHHHcCChhHHHHHHhcc
Q 016433 235 QFARRLGLEAVI----RNLEEAVFE-------------YAEVQEILEKRGKGDQLEYLVKWR 279 (389)
Q Consensus 235 ~~A~~~g~~~~v----~~Ll~~g~~-------------~~~~~~~a~~~g~~~~~~~L~~~~ 279 (389)
|+|+..|+.+++ ++|++.|++ +.++.++|+..|+.+++++|++..
T Consensus 159 ~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g 220 (232)
T 2rfa_A 159 HILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKR 220 (232)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 999999999988 999998873 458899999999999999999754
No 22
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=2e-29 Score=232.43 Aligned_cols=171 Identities=25% Similarity=0.322 Sum_probs=157.6
Q ss_pred cccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHH
Q 016433 106 KDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTAL 185 (389)
Q Consensus 106 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpL 185 (389)
..++.+|.||||.||..|+.++|++|++.| +++|..|..|.||||+||..|+.++|++|+++|++++.+|.. |+|||
T Consensus 34 ~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~-g~tpL 110 (299)
T 1s70_B 34 TKVKFDDGAVFLAACSSGDTEEVLRLLERG--ADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNE-GWIPL 110 (299)
T ss_dssp CCCEECHHHHHHHHHHHTCHHHHHHHHHHC--CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHH
T ss_pred cccccCCccHHHHHHHcCCHHHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCcHH
Confidence 344567899999999999999999999999 999999999999999999999999999999999999999999 99999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHH---------h-------------------------------
Q 016433 186 HMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEI---------L------------------------------- 225 (389)
Q Consensus 186 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~---------~------------------------------- 225 (389)
|+|+..|+.+++++|+++|++++..|..|.||||+|+.. +
T Consensus 111 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (299)
T 1s70_B 111 HAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI 190 (299)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCc
Confidence 999999999999999999999999999999999998531 1
Q ss_pred ----ccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHHHHHcCChhHHHHHHhcc
Q 016433 226 ----RVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEILEKRGKGDQLEYLVKWR 279 (389)
Q Consensus 226 ----~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a~~~g~~~~~~~L~~~~ 279 (389)
....|.||||+|+..|+.++|++|++.|++ +.++.++|+..|+.+++++|++..
T Consensus 191 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 255 (299)
T 1s70_B 191 NDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENL 255 (299)
T ss_dssp CCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred chhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcC
Confidence 124688999999999999999999999875 457999999999999999999764
No 23
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=1e-30 Score=238.52 Aligned_cols=178 Identities=22% Similarity=0.271 Sum_probs=150.9
Q ss_pred HHHHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCC
Q 016433 67 GEVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDND 146 (389)
Q Consensus 67 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~ 146 (389)
+.+..++++...+ .+++++|++.+... ......+..|.||||+||..|+.+++++|+++| ++++.+|..
T Consensus 9 g~t~L~~A~~~g~-~~~v~~Ll~~g~~~--------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--a~~~~~~~~ 77 (282)
T 1oy3_D 9 GDTALHLAVIHQH-EPFLDFLLGFSAGH--------EYLDLQNDLGQTALHLAAILGEASTVEKLYAAG--AGVLVAERG 77 (282)
T ss_dssp CCCHHHHHHHTTC-HHHHHHHHHHHTTS--------GGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCSSCCCTT
T ss_pred CCcHHHHHHHcCC-HHHHHHHHhcCCCc--------ccccccCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCCCCC
Confidence 3445555555443 77777777654210 113445678999999999999999999999999 999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCC-----------------------------------------------cccccCC
Q 016433 147 GRTALLFVSGLGSEACVRVLAEAGTD-----------------------------------------------LNHRDSG 179 (389)
Q Consensus 147 g~t~Lh~A~~~g~~~~v~~Ll~~ga~-----------------------------------------------~~~~d~~ 179 (389)
|+||||+|+..|+.+++++|+++|++ ++.++..
T Consensus 78 g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (282)
T 1oy3_D 78 GHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYD 157 (282)
T ss_dssp SCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTT
T ss_pred CCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCC
Confidence 99999999999999999999998765 7788888
Q ss_pred CCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCC-CCcHHHHHHH---------Hh--------ccCCCCCHHHHHHHhC
Q 016433 180 GGLTALHMAAGYVKPGVAKLLLELGADADVEDDR-GLTPLALAKE---------IL--------RVTPKGNPMQFARRLG 241 (389)
Q Consensus 180 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~-g~tpL~~A~~---------~~--------~~~~g~t~l~~A~~~g 241 (389)
|.||||+|+..|+.+++++|+++|++++..+.. |+||||+|+. ++ .+..|.||||+|+..|
T Consensus 158 -g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~ 236 (282)
T 1oy3_D 158 -GHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRP 236 (282)
T ss_dssp -SCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSS
T ss_pred -CcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcC
Confidence 999999999999999999999999999999864 9999999986 12 2356899999999999
Q ss_pred cHHHHHHHHHcccCh
Q 016433 242 LEAVIRNLEEAVFEY 256 (389)
Q Consensus 242 ~~~~v~~Ll~~g~~~ 256 (389)
+.+++++|+++|++.
T Consensus 237 ~~~~v~~Ll~~ga~~ 251 (282)
T 1oy3_D 237 NPILARLLRAHGAPE 251 (282)
T ss_dssp CHHHHHHHHHTTCCC
T ss_pred CcHHHHHHHHcCCCc
Confidence 999999999999963
No 24
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=3.8e-29 Score=243.09 Aligned_cols=199 Identities=24% Similarity=0.271 Sum_probs=168.4
Q ss_pred hHHHHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCC
Q 016433 66 YGEVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDN 145 (389)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~ 145 (389)
.+.+..++++...+ .+++++|++.+. ..+..+.+|.||||+|+..|+.+++++|+++| ++++..+.
T Consensus 46 ~~~t~L~~A~~~g~-~~~v~~Ll~~g~-----------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--a~~~~~~~ 111 (437)
T 1n11_A 46 KVETPLHMAARAGH-TEVAKYLLQNKA-----------KVNAKAKDDQTPLHCAARIGHTNMVKLLLENN--ANPNLATT 111 (437)
T ss_dssp CCCCHHHHHHHHTC-HHHHHHHHHHTC-----------CSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHT--CCTTCCCT
T ss_pred CCCCHHHHHHHcCC-HHHHHHHHhCCC-----------CCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCC--CCCCCCCC
Confidence 34445555555554 888888887652 23345678999999999999999999999999 99999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH--
Q 016433 146 DGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKE-- 223 (389)
Q Consensus 146 ~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~-- 223 (389)
.|.||||+|+..|+.+++++|++.+++++..+.. |.||||+|+..|+.+++++|+++|++++..+..|.||||+|+.
T Consensus 112 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 190 (437)
T 1n11_A 112 AGHTPLHIAAREGHVETVLALLEKEASQACMTKK-GFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHN 190 (437)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCC-CCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcC
Confidence 9999999999999999999999999999999998 9999999999999999999999999999999999999999986
Q ss_pred -------Hhc--------cCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHHHHHcCChhHHHHHHhcc
Q 016433 224 -------ILR--------VTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEILEKRGKGDQLEYLVKWR 279 (389)
Q Consensus 224 -------~~~--------~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a~~~g~~~~~~~L~~~~ 279 (389)
++. ...|.||||+|+..|+.+++++|++.|++ +.++.++|+..|+.+++++|++..
T Consensus 191 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~ 268 (437)
T 1n11_A 191 NLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQ 268 (437)
T ss_dssp CHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred CHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcC
Confidence 222 23578999999999999999999998764 457888899999999999998653
No 25
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=5.1e-30 Score=235.37 Aligned_cols=200 Identities=19% Similarity=0.171 Sum_probs=168.9
Q ss_pred CCCCChHHHHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCc
Q 016433 61 NDDESYGEVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDV 140 (389)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 140 (389)
...+..+.+..++++...+ .+++++|++.+ ......+.+|.||||+||..|+.+++++|++.| +++
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~-~~~v~~Ll~~g-----------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--a~~ 118 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGH-QLSLRNLISQG-----------WAVNIITADHVSPLHEACLGGHLSCVKILLKHG--AQV 118 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTC-HHHHHHHHHTT-----------CCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTT--CCS
T ss_pred cCCCccCCCHHHHHHHcCC-HHHHHHHHHCC-----------CCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCC--CCC
Confidence 3334444555565555554 77788887754 234456778999999999999999999999999 999
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 016433 141 DAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLAL 220 (389)
Q Consensus 141 ~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~ 220 (389)
+.+|..|.||||+|+..|+.+++++|+++|++++..+ . |.||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 119 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~-g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~ 196 (285)
T 3d9h_A 119 NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-D-LASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYL 196 (285)
T ss_dssp SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-T-TSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHH
T ss_pred CCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-C-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 9999999999999999999999999999999998654 4 8999999999999999999999999999999999999999
Q ss_pred HHH---------Hh-------ccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHHHHHcCChhHHHHHHh
Q 016433 221 AKE---------IL-------RVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEILEKRGKGDQLEYLVK 277 (389)
Q Consensus 221 A~~---------~~-------~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a~~~g~~~~~~~L~~ 277 (389)
|+. ++ .+..|.||||+|+..|+.++|++|++.|++ +.++.++|. ++.+++++|++
T Consensus 197 A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~ 274 (285)
T 3d9h_A 197 ACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLE 274 (285)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHH
T ss_pred HHHcCcHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHH
Confidence 986 22 234678999999999999999999999986 446677776 56788998887
Q ss_pred c
Q 016433 278 W 278 (389)
Q Consensus 278 ~ 278 (389)
.
T Consensus 275 ~ 275 (285)
T 3d9h_A 275 R 275 (285)
T ss_dssp H
T ss_pred h
Confidence 5
No 26
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=4e-30 Score=244.11 Aligned_cols=204 Identities=17% Similarity=0.105 Sum_probs=174.8
Q ss_pred CCCCCCCChHHHHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCC
Q 016433 58 TDQNDDESYGEVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDG 137 (389)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 137 (389)
.+.+..+..+.+..++++...+ .+++++|++.+. .....+..|.||||+||..|+.++|++|++.|
T Consensus 11 ~~~~~~d~~g~t~L~~Aa~~g~-~~~v~~Ll~~g~-----------~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-- 76 (364)
T 3ljn_A 11 LNRIKSDDENMEKIHVAARKGQ-TDEVRRLIETGV-----------SPTIQNRFGCTALHLACKFGCVDTAKYLASVG-- 76 (364)
T ss_dssp -----CCHHHHHHHHHHHHHTC-HHHHHHHHHTTC-----------CTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHC--
T ss_pred CCccccCCCCCCHHHHHHHcCC-HHHHHHHHHcCC-----------CccccCCCCCcHHHHHHHcCCHHHHHHHHHCC--
Confidence 3344455667777777777665 999999998652 33445678999999999999999999999999
Q ss_pred CCccccCCCCCcHHHHHHHcCCHHHHHHHHhc----CCCccc-----------------ccCCCCccHHHHHHhcC--CH
Q 016433 138 RDVDAVDNDGRTALLFVSGLGSEACVRVLAEA----GTDLNH-----------------RDSGGGLTALHMAAGYV--KP 194 (389)
Q Consensus 138 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~----ga~~~~-----------------~d~~~g~tpLh~A~~~g--~~ 194 (389)
++++. ..|.||||+|+..|+.++|++|++. |++++. .|.. |.||||+|+..| +.
T Consensus 77 ~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~t~L~~A~~~g~~~~ 153 (364)
T 3ljn_A 77 EVHSL--WHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCK-GQTALHWCVGLGPEYL 153 (364)
T ss_dssp CCCCC--BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEES-CCCHHHHHHHSCGGGH
T ss_pred CCccc--cCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCC-CCCHHHHHHHcCCchH
Confidence 75543 5799999999999999999999999 888887 8888 999999999999 99
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcHHHHHHH---------Hhc-------------cCCCCCHHHHHHHhCcHHHHHHHHHc
Q 016433 195 GVAKLLLELGADADVEDDRGLTPLALAKE---------ILR-------------VTPKGNPMQFARRLGLEAVIRNLEEA 252 (389)
Q Consensus 195 ~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~---------~~~-------------~~~g~t~l~~A~~~g~~~~v~~Ll~~ 252 (389)
+++++|+++|++++..|..|.||||+|+. ++. +..|.||||+|+..|+.++|++|+++
T Consensus 154 ~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 233 (364)
T 3ljn_A 154 EMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEM 233 (364)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 99999999999999999999999999986 221 24688999999999999999999999
Q ss_pred ccC-------hHHHHHHHHHcCChhHHHHHHhc
Q 016433 253 VFE-------YAEVQEILEKRGKGDQLEYLVKW 278 (389)
Q Consensus 253 g~~-------~~~~~~~a~~~g~~~~~~~L~~~ 278 (389)
|++ +.++.++|+..|+.+++++|++.
T Consensus 234 gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 266 (364)
T 3ljn_A 234 GIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQK 266 (364)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHc
Confidence 985 45799999999999999999975
No 27
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=2.1e-29 Score=224.29 Aligned_cols=157 Identities=25% Similarity=0.263 Sum_probs=144.2
Q ss_pred cccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCcc
Q 016433 104 IAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLT 183 (389)
Q Consensus 104 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~t 183 (389)
+....+.+|.||||+||..|+.+++++|+++| ++++..+..|.||||+|+..|+.+++++|+++|++++.++.. |.|
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t 79 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAG--ANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAE-GST 79 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTT-SCC
T ss_pred CcccccCCCCCHHHHHHHcCcHHHHHHHHHcC--CCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCC-CCc
Confidence 34455678999999999999999999999999 999999999999999999999999999999999999999999 999
Q ss_pred HHHHHHhcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------
Q 016433 184 ALHMAAGYVKPGVAKLLLELG-ADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE------- 255 (389)
Q Consensus 184 pLh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~------- 255 (389)
|||+|+..|+.+++++|++.| ++++..|..|.||||+ |+..|+.+++++|++.|++
T Consensus 80 ~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~----------------A~~~~~~~~~~~Ll~~g~~~~~~~~~ 143 (237)
T 3b7b_A 80 CLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIW----------------ATEYKHVDLVKLLLSKGSDINIRDNE 143 (237)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHH----------------HHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHH----------------HHHcCCHHHHHHHHHCCCCCCccCCC
Confidence 999999999999999999998 8999998888777655 5568999999999999875
Q ss_pred hHHHHHHHHHcCChhHHHHHHhcc
Q 016433 256 YAEVQEILEKRGKGDQLEYLVKWR 279 (389)
Q Consensus 256 ~~~~~~~a~~~g~~~~~~~L~~~~ 279 (389)
+.++.+.|+..|+.+++++|++..
T Consensus 144 g~t~L~~A~~~~~~~~~~~Ll~~g 167 (237)
T 3b7b_A 144 ENICLHWAAFSGCVDIAEILLAAK 167 (237)
T ss_dssp SCCHHHHHHHHCCHHHHHHHHTTT
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcC
Confidence 457899999999999999999764
No 28
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=3.7e-29 Score=228.13 Aligned_cols=198 Identities=24% Similarity=0.182 Sum_probs=172.0
Q ss_pred HHHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCC
Q 016433 68 EVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDG 147 (389)
Q Consensus 68 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g 147 (389)
.+..++++... ..+++++|++.+. .....+..|.||||+|+..|+.+++++|+++| ++++.+|..|
T Consensus 40 ~t~L~~A~~~g-~~~~v~~Ll~~g~-----------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g 105 (285)
T 1wdy_A 40 WTPLHNAVQMS-REDIVELLLRHGA-----------DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKG--ADVNECDFYG 105 (285)
T ss_dssp CCHHHHHHHTT-CHHHHHHHHHTTC-----------CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT--CCTTCBCTTC
T ss_pred CcHHHHHHHcC-CHHHHHHHHHcCC-----------CCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCccCccc
Confidence 34455554444 3788888887642 23345678999999999999999999999999 9999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcccc----------cCCCCccHHHHHHhcCCHHHHHHHHHc-CCCCCCCCCCCCc
Q 016433 148 RTALLFVSGLGSEACVRVLAEAGTDLNHR----------DSGGGLTALHMAAGYVKPGVAKLLLEL-GADADVEDDRGLT 216 (389)
Q Consensus 148 ~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~----------d~~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~t 216 (389)
.||||+|+..|+.+++++|+++|++++.. +.. |.||||+|+..|+.+++++|++. |++++..|..|.|
T Consensus 106 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t 184 (285)
T 1wdy_A 106 FTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKG-GATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN 184 (285)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCC-CCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCC
T ss_pred CCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccC-CCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence 99999999999999999999999999987 777 99999999999999999999998 9999999999999
Q ss_pred HHHHHHHH-------------h--------ccCCCCCHHHHHHHhCcHHHHHHHHH-cccC-------hHHHHHHHHHcC
Q 016433 217 PLALAKEI-------------L--------RVTPKGNPMQFARRLGLEAVIRNLEE-AVFE-------YAEVQEILEKRG 267 (389)
Q Consensus 217 pL~~A~~~-------------~--------~~~~g~t~l~~A~~~g~~~~v~~Ll~-~g~~-------~~~~~~~a~~~g 267 (389)
|||+|+.. + .+..|.||||+|+..|+.++|++|++ .|++ +.++.++|...|
T Consensus 185 ~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~ 264 (285)
T 1wdy_A 185 ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELK 264 (285)
T ss_dssp HHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcC
Confidence 99999751 1 23468899999999999999999999 6764 568999999999
Q ss_pred ChhHHHHHHhccC
Q 016433 268 KGDQLEYLVKWRD 280 (389)
Q Consensus 268 ~~~~~~~L~~~~~ 280 (389)
+.+++++|++...
T Consensus 265 ~~~i~~~Ll~~Ga 277 (285)
T 1wdy_A 265 LKKIAELLCKRGA 277 (285)
T ss_dssp CHHHHHHHHHHSS
T ss_pred cHHHHHHHHHcCC
Confidence 9999999997643
No 29
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=4.8e-30 Score=231.27 Aligned_cols=171 Identities=22% Similarity=0.223 Sum_probs=125.8
Q ss_pred cccccCCChHHHHHHHcC-------------CHHHHHHHHHhCCCCCccc-cCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Q 016433 106 KDVVAEYESPWWTAAKKA-------------DDAALKEIIEAGDGRDVDA-VDNDGRTALLFVSGLGSEACVRVLAEAGT 171 (389)
Q Consensus 106 ~~~~~~g~t~L~~A~~~g-------------~~~~v~~Ll~~g~~~~~~~-~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga 171 (389)
+..+.+|.||||+|+..| +.++++.|+..| ++++. .|..|+||||+|+..|+.++|++|+++|+
T Consensus 4 n~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 81 (253)
T 1yyh_A 4 NVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQG--ASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA 81 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHcc--CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 345678999999999987 899999999999 77754 58999999999999999999999999999
Q ss_pred CcccccCCCCccHHHHHHhcCCHHHHHHHHHcCC-CCCCCCCCCCcHHHHHHHH---------h--------ccCCCCCH
Q 016433 172 DLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGA-DADVEDDRGLTPLALAKEI---------L--------RVTPKGNP 233 (389)
Q Consensus 172 ~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga-~~~~~d~~g~tpL~~A~~~---------~--------~~~~g~t~ 233 (389)
+++.+|.. |+||||+|+..|+.+++++|+++|+ +++..|..|.||||+|+.. + .+..|.||
T Consensus 82 ~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~ 160 (253)
T 1yyh_A 82 DANIQDNM-GRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSA 160 (253)
T ss_dssp CTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBH
T ss_pred CCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 99999999 9999999999999999999999987 9999999999999999862 2 23468999
Q ss_pred HHHHHHhCcHHHHHHHHHcccC-------hHHHHHHHHHcCChhHHHHHHhcc
Q 016433 234 MQFARRLGLEAVIRNLEEAVFE-------YAEVQEILEKRGKGDQLEYLVKWR 279 (389)
Q Consensus 234 l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a~~~g~~~~~~~L~~~~ 279 (389)
||+|+..|+.+++++|++.|++ +.++.++|+..|+.+++++|+++.
T Consensus 161 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 213 (253)
T 1yyh_A 161 LHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF 213 (253)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999985 568899999999999999999753
No 30
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=2.3e-29 Score=236.33 Aligned_cols=210 Identities=21% Similarity=0.222 Sum_probs=173.4
Q ss_pred HHHHHHHhccCCCCChHHHHHHHcCCCCCCc----------------------cccCcccccccccCCChHHHHHHHcCC
Q 016433 67 GEVSKIIGSRALEDATGMEYLIEWKDGHAPS----------------------WVPQDYIAKDVVAEYESPWWTAAKKAD 124 (389)
Q Consensus 67 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~----------------------~~~~~~~~~~~~~~g~t~L~~A~~~g~ 124 (389)
+.++.++++...+ .+++++|++.+...... ...........+..|.||||+|+..|+
T Consensus 59 g~TpLh~A~~~g~-~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~ 137 (337)
T 4g8k_A 59 GWTPLHNAVQMSR-EDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK 137 (337)
T ss_dssp CCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTC
T ss_pred CcCHHHHHHHcCC-HHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCc
Confidence 4566777666655 89999999876321110 011223344567789999999999999
Q ss_pred HHHHHHHHHhCCCCCcccc----------CCCCCcHHHHHHHcCCHHHHHHHHh-cCCCcccccCCCCccHHHHHHhcCC
Q 016433 125 DAALKEIIEAGDGRDVDAV----------DNDGRTALLFVSGLGSEACVRVLAE-AGTDLNHRDSGGGLTALHMAAGYVK 193 (389)
Q Consensus 125 ~~~v~~Ll~~g~~~~~~~~----------d~~g~t~Lh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~~g~tpLh~A~~~g~ 193 (389)
.+++++|++.| ++++.. +..|.||||+|+..|+.++|++||+ .|+++|.+|.. |.|+||.++..+.
T Consensus 138 ~~~~~~ll~~g--a~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~-g~t~l~~~~~~~~ 214 (337)
T 4g8k_A 138 VKALKFLYKRG--ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNM-GRNALIHALLSSD 214 (337)
T ss_dssp HHHHHHHHHTT--CCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTT-SCCHHHHHHHHSC
T ss_pred HHHHHHHHHcC--CCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCC-CCcHHHHHHHHcC
Confidence 99999999999 777654 4568999999999999999999996 59999999999 9999999876544
Q ss_pred ----HHHHHHHHHcCCCCCCCCCCCCcHHHHHHH---------Hh---------ccCCCCCHHHHHHHhCcHHHHHHHHH
Q 016433 194 ----PGVAKLLLELGADADVEDDRGLTPLALAKE---------IL---------RVTPKGNPMQFARRLGLEAVIRNLEE 251 (389)
Q Consensus 194 ----~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~---------~~---------~~~~g~t~l~~A~~~g~~~~v~~Ll~ 251 (389)
..++++|+++|++++.+|..|+||||+|+. ++ .+..|.||||+|++.|+.++|++|++
T Consensus 215 ~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 294 (337)
T 4g8k_A 215 DSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCK 294 (337)
T ss_dssp TTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHT
T ss_pred cccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 468899999999999999999999999986 22 23578999999999999999999999
Q ss_pred cccC--hHHHHHHHHHcCChhHHHHHHhccC
Q 016433 252 AVFE--YAEVQEILEKRGKGDQLEYLVKWRD 280 (389)
Q Consensus 252 ~g~~--~~~~~~~a~~~g~~~~~~~L~~~~~ 280 (389)
+|++ ..++.+.|+..|+.+++++|+++..
T Consensus 295 ~GAd~n~~~~L~~A~~~~~~~iv~~Ll~~GA 325 (337)
T 4g8k_A 295 RGASTDCGDLVMTARRNYDHSLVKVLLSHGA 325 (337)
T ss_dssp TSCSSTTCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHCcC
Confidence 9986 4578899999999999999997643
No 31
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=6.1e-31 Score=241.54 Aligned_cols=166 Identities=16% Similarity=0.073 Sum_probs=95.9
Q ss_pred cccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHH
Q 016433 108 VVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHM 187 (389)
Q Consensus 108 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~ 187 (389)
.+.+|.||||+|+..|+.+++++|++.| ++++..| |+||||+|+..|+.++|++|+++|++++.+|.. |+||||+
T Consensus 27 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~-g~t~L~~ 101 (285)
T 3kea_A 27 ADVHGHSASYYAIADNNVRLVCTLLNAG--ALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDK-GNTALYY 101 (285)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTT--GGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTT-SCCHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhCC--CCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC-CCcHHHH
Confidence 3445566666666666666666666665 5555552 566666666666666666666666666666665 6666666
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCC-CcHHHHHHH---------Hhcc------C-CCCCHHHHHHHhCcHHHHHHHH
Q 016433 188 AAGYVKPGVAKLLLELGADADVEDDRG-LTPLALAKE---------ILRV------T-PKGNPMQFARRLGLEAVIRNLE 250 (389)
Q Consensus 188 A~~~g~~~~v~~Ll~~ga~~~~~d~~g-~tpL~~A~~---------~~~~------~-~g~t~l~~A~~~g~~~~v~~Ll 250 (389)
|+..|+.+++++|+++|++++.+|..| .||||+|+. ++.. . .|.||||+|+..|+.++|++|+
T Consensus 102 A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 181 (285)
T 3kea_A 102 AVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLL 181 (285)
T ss_dssp HHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHH
Confidence 666666666666666666666666665 466666654 1111 1 3446666666666666666666
Q ss_pred HcccC-------hHHH-HHHHHHcCChhHHHHHHhc
Q 016433 251 EAVFE-------YAEV-QEILEKRGKGDQLEYLVKW 278 (389)
Q Consensus 251 ~~g~~-------~~~~-~~~a~~~g~~~~~~~L~~~ 278 (389)
++|++ +.++ .++|+..|+.+++++|++.
T Consensus 182 ~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~ 217 (285)
T 3kea_A 182 DYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKY 217 (285)
T ss_dssp HHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTS
T ss_pred HcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHc
Confidence 65542 2233 5666666666666666544
No 32
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=3.2e-29 Score=223.46 Aligned_cols=203 Identities=24% Similarity=0.246 Sum_probs=172.9
Q ss_pred HhccCCCCChHHHHHHHcCCCCCCcccc-----CcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCC
Q 016433 73 IGSRALEDATGMEYLIEWKDGHAPSWVP-----QDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDG 147 (389)
Q Consensus 73 ~~~~~~~~~~~l~~l~~~~~~~~~~~~~-----~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g 147 (389)
+..++..|.+++++++..++.....++. ........+..|.||||+|+..|+.+++++|++.| ++++.+|..|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g 79 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAG--ASPMALDRHG 79 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTS
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcC--CCccccCCCC
Confidence 3456677899999999998765555443 34555666788999999999999999999999999 9999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCC----CcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHH
Q 016433 148 RTALLFVSGLGSEACVRVLAEAGT----DLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVED-DRGLTPLALAK 222 (389)
Q Consensus 148 ~t~Lh~A~~~g~~~~v~~Ll~~ga----~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~tpL~~A~ 222 (389)
.||||+|+..|+.+++++|++.++ +++..+.. |.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+
T Consensus 80 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~ 158 (241)
T 1k1a_A 80 QTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYD-GLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAV 158 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcC-CCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHH
Confidence 999999999999999999999987 89999999 9999999999999999999999999999998 89999999998
Q ss_pred H---------Hh--------ccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHHHHHcCChhHHHHHHhc
Q 016433 223 E---------IL--------RVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEILEKRGKGDQLEYLVKW 278 (389)
Q Consensus 223 ~---------~~--------~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a~~~g~~~~~~~L~~~ 278 (389)
. ++ .+..|.||||+|+..|+.+++++|+++|++ +.++.++|+..|+.++++.|.+.
T Consensus 159 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~ 238 (241)
T 1k1a_A 159 ENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATR 238 (241)
T ss_dssp HTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC----
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccC
Confidence 6 12 234688999999999999999999999986 34677888888888888877643
No 33
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=2.8e-30 Score=237.08 Aligned_cols=200 Identities=14% Similarity=0.046 Sum_probs=172.5
Q ss_pred hccCCCCChHHHHHHHcCCCCCCccccCc-ccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHH
Q 016433 74 GSRALEDATGMEYLIEWKDGHAPSWVPQD-YIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALL 152 (389)
Q Consensus 74 ~~~~~~~~~~l~~l~~~~~~~~~~~~~~~-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh 152 (389)
...+..|.+++++++..++.....++... ..... .+|.||||+|+..|+.+++++|+++| ++++.+|..|+||||
T Consensus 25 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~g--a~~~~~d~~g~t~L~ 100 (285)
T 3kea_A 25 FKADVHGHSASYYAIADNNVRLVCTLLNAGALKNL--LENEFPLHQAATLEDTKIVKILLFSG--LDDSQFDDKGNTALY 100 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSC--CTTCCHHHHHTTSSSCHHHHHHHHTT--CCTTCCCTTSCCHHH
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC--CCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCcCCCCCcHHH
Confidence 33445589999999998876666554433 22222 26999999999999999999999999 999999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCcccccCCCC-ccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHH-------
Q 016433 153 FVSGLGSEACVRVLAEAGTDLNHRDSGGG-LTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEI------- 224 (389)
Q Consensus 153 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g-~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~------- 224 (389)
+|+..|+.+++++|+++|++++.++.. | .||||+|+..|+.+++++|+++|+++... ..|.||||+|+..
T Consensus 101 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~-g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~ 178 (285)
T 3kea_A 101 YAVDSGNMQTVKLFVKKNWRLMFYGKT-GWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMI 178 (285)
T ss_dssp HHHHTTCHHHHHHHHHHCGGGGGCSSS-GGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHhcCCCCCccCCC-CCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHH
Confidence 999999999999999999999999999 8 79999999999999999999999887332 2899999999861
Q ss_pred ----------hccCCCCCH-HHHHHHhCcHHHHHHHHHcccChHHHHHHHHHcCChhHHHHHHhcc
Q 016433 225 ----------LRVTPKGNP-MQFARRLGLEAVIRNLEEAVFEYAEVQEILEKRGKGDQLEYLVKWR 279 (389)
Q Consensus 225 ----------~~~~~g~t~-l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~a~~~g~~~~~~~L~~~~ 279 (389)
..+..|.|| ||+|+..|+.+++++|+++|++.......+...|+.+++++|++..
T Consensus 179 ~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~a~~~~~~~iv~~Ll~~g 244 (285)
T 3kea_A 179 LLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANLENVLLDDAEIAKMIIEKH 244 (285)
T ss_dssp HHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTGGGGTTTCHHHHHHHHHHH
T ss_pred HHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCChhhhhcCCHHHHHHHHHcC
Confidence 223568897 9999999999999999999998777767788899999999999764
No 34
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=1.4e-29 Score=241.35 Aligned_cols=199 Identities=17% Similarity=0.177 Sum_probs=167.0
Q ss_pred ccCCCCChHHHHHHHcCCCCCCccccCcccccccc-cCCChHHHHHHHcCCHHHHHHHH--------HhCCCCCccccCC
Q 016433 75 SRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVV-AEYESPWWTAAKKADDAALKEII--------EAGDGRDVDAVDN 145 (389)
Q Consensus 75 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll--------~~g~~~~~~~~d~ 145 (389)
.....+.+++++++..+. ....++.. ...+..+ ..|.||||+||..|+.+++++|+ +.| +++|.+|.
T Consensus 89 ~~~~~g~t~L~~Aa~~~~-~~~~~L~~-~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~g--a~vn~~d~ 164 (373)
T 2fo1_E 89 EPEPESPIKLHTEAAGSY-AITEPITR-ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAG--ADVNAMDC 164 (373)
T ss_dssp -----CCCHHHHHHHSSS-CCCSCCST-TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTC--CCTTCCCT
T ss_pred CCCCCCccHHHHHhcCCc-hHHHHhcc-ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcC--CCCcCCCC
Confidence 344558999999998554 33333332 2334444 68999999999999998887776 778 99999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcC---CCCCCCCCCCCcHHHHHH
Q 016433 146 DGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELG---ADADVEDDRGLTPLALAK 222 (389)
Q Consensus 146 ~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~g---a~~~~~d~~g~tpL~~A~ 222 (389)
.|.||||+|+..|+.++|++|+++|++++..|.. |.||||+|+..|+.+++++|+++| ++++..|..|.||||+|+
T Consensus 165 ~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~ 243 (373)
T 2fo1_E 165 DENTPLMLAVLARRRRLVAYLMKAGADPTIYNKS-ERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVA 243 (373)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT-CCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCC-CCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHH
Confidence 9999999999999999999999999999999999 999999999999999999999998 899999999999999998
Q ss_pred HH------------h----------------ccCCCCCHHHHHHHhCcHHHHHHHHHcc-c-------ChHHHHHHHHHc
Q 016433 223 EI------------L----------------RVTPKGNPMQFARRLGLEAVIRNLEEAV-F-------EYAEVQEILEKR 266 (389)
Q Consensus 223 ~~------------~----------------~~~~g~t~l~~A~~~g~~~~v~~Ll~~g-~-------~~~~~~~~a~~~ 266 (389)
.. + .+..|.||||+|+..|+.++|++|++.+ + ++.++.++|+..
T Consensus 244 ~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~ 323 (373)
T 2fo1_E 244 HNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQE 323 (373)
T ss_dssp HSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHH
T ss_pred HhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHc
Confidence 52 1 1226789999999999999999999876 4 356899999999
Q ss_pred CChhHHHHHHhc
Q 016433 267 GKGDQLEYLVKW 278 (389)
Q Consensus 267 g~~~~~~~L~~~ 278 (389)
|+.+++++|++.
T Consensus 324 g~~~iv~~Ll~~ 335 (373)
T 2fo1_E 324 GRIEVVMYLIQQ 335 (373)
T ss_dssp TCHHHHHHHHHT
T ss_pred CCHHHHHHHHHc
Confidence 999999999853
No 35
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.96 E-value=5.2e-29 Score=219.66 Aligned_cols=178 Identities=26% Similarity=0.287 Sum_probs=155.4
Q ss_pred HHHHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCC
Q 016433 67 GEVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDND 146 (389)
Q Consensus 67 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~ 146 (389)
+.+..++++...+ .+++++|++.+. .....+..|.||||+|+..|+.+++++|++.++ .+++..+..
T Consensus 25 g~t~L~~A~~~g~-~~~v~~Ll~~g~-----------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~ 91 (223)
T 2f8y_A 25 GETALHLAARYSR-SDAAKRLLEASA-----------DANIQDNMGRTPLHAAVSADAQGVFQILIRNRA-TDLDARMHD 91 (223)
T ss_dssp CCCHHHHHHHTTC-HHHHHHHHHTTC-----------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTT-SCTTCCCTT
T ss_pred CCchHHHHHHcCC-HHHHHHHHHcCC-----------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCC
Confidence 4445555555544 888888887642 233456789999999999999999999999982 489999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHH--
Q 016433 147 GRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEI-- 224 (389)
Q Consensus 147 g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~-- 224 (389)
|.||||+|+..|+.+++++|+++|++++..|.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 92 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 170 (223)
T 2f8y_A 92 GTTPLILAARLAVEGMLEDLINSHADVNAVDDL-GKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGS 170 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTT-SCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCC
Confidence 999999999999999999999999999999999 99999999999999999999999999999999999999999862
Q ss_pred -------h--------ccCCCCCHHHHHHHhCcHHHHHHHHHcccChHH
Q 016433 225 -------L--------RVTPKGNPMQFARRLGLEAVIRNLEEAVFEYAE 258 (389)
Q Consensus 225 -------~--------~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~ 258 (389)
+ .+..|.|||++|+..|+.+++++|+++|+....
T Consensus 171 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~~ 219 (223)
T 2f8y_A 171 YETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSP 219 (223)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSCC
T ss_pred HHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCccc
Confidence 2 235688999999999999999999999986543
No 36
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=8.3e-30 Score=229.91 Aligned_cols=146 Identities=23% Similarity=0.269 Sum_probs=121.5
Q ss_pred cccCCChHHHHHHHc---CCHHHHHHHHHhCCCCCccc-----------cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc
Q 016433 108 VVAEYESPWWTAAKK---ADDAALKEIIEAGDGRDVDA-----------VDNDGRTALLFVSGLGSEACVRVLAEAGTDL 173 (389)
Q Consensus 108 ~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~-----------~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~ 173 (389)
.+..|.||||+|+.. |+.+++++|++.| ++++. .|..|.||||+|+..|+.++|++|+++|+++
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g--~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 116 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQID--KDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV 116 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHH--HHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcC--CcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 577899999999999 9999999999998 66653 3477999999999999999999999999999
Q ss_pred ccccCCC------------CccHHHHHHhcCCHHHHHHHHH---cCCCCCCCCCCCCcHHHHHHHH--------------
Q 016433 174 NHRDSGG------------GLTALHMAAGYVKPGVAKLLLE---LGADADVEDDRGLTPLALAKEI-------------- 224 (389)
Q Consensus 174 ~~~d~~~------------g~tpLh~A~~~g~~~~v~~Ll~---~ga~~~~~d~~g~tpL~~A~~~-------------- 224 (389)
+.++... |.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~i 196 (256)
T 2etb_A 117 HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHM 196 (256)
T ss_dssp TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHH
T ss_pred CcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHH
Confidence 9988742 8999999999999999999999 9999999999999999988751
Q ss_pred -------------------hccCCCCCHHHHHHHhCcHHHHHHHHHcccC
Q 016433 225 -------------------LRVTPKGNPMQFARRLGLEAVIRNLEEAVFE 255 (389)
Q Consensus 225 -------------------~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~ 255 (389)
..+..|.||||+|+..|+.++|++|+++|.+
T Consensus 197 v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 197 YDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFS 246 (256)
T ss_dssp HHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC
Confidence 0123455666666666666666666666554
No 37
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=3.6e-29 Score=221.33 Aligned_cols=173 Identities=18% Similarity=0.171 Sum_probs=127.8
Q ss_pred HHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccc-cCCCCC
Q 016433 70 SKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDA-VDNDGR 148 (389)
Q Consensus 70 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~d~~g~ 148 (389)
..+.++... ..++++++++.+.. .....+..|.||||+|+..|+.+++++|++.|...+++. .+..|.
T Consensus 5 ~L~~A~~~g-~~~~v~~Ll~~~~~----------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~ 73 (228)
T 2dzn_A 5 PLHQACMEN-EFFKVQELLHSKPS----------LLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGW 73 (228)
T ss_dssp HHHHHHHTT-CHHHHHHHHHHCGG----------GTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSC
T ss_pred HHHHHHHhC-CHHHHHHHHhcCcc----------ccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCC
Confidence 344444443 37777877776421 112246788999999999999999999999884455555 778899
Q ss_pred cHHHHHHHcCCHHHHHHHHhcC--CCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH---
Q 016433 149 TALLFVSGLGSEACVRVLAEAG--TDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKE--- 223 (389)
Q Consensus 149 t~Lh~A~~~g~~~~v~~Ll~~g--a~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~--- 223 (389)
||||+|+..|+.+++++|+++| ++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 74 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 152 (228)
T 2dzn_A 74 TPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQ-GVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGS 152 (228)
T ss_dssp CHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTT-CCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCcccccCCcC-CCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCC
Confidence 9999999999999999999988 888888888 9999999999999999999999999999998888888777764
Q ss_pred ------Hh---------ccCCCCCHHHHHHHhCcHHHHHHHH-Hccc
Q 016433 224 ------IL---------RVTPKGNPMQFARRLGLEAVIRNLE-EAVF 254 (389)
Q Consensus 224 ------~~---------~~~~g~t~l~~A~~~g~~~~v~~Ll-~~g~ 254 (389)
++ .+..|.||||+|+..|+.+++++|+ +.|+
T Consensus 153 ~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga 199 (228)
T 2dzn_A 153 LKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGA 199 (228)
T ss_dssp HHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCC
T ss_pred HHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC
Confidence 11 1123445555555555555555555 4444
No 38
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=7.5e-29 Score=215.01 Aligned_cols=166 Identities=19% Similarity=0.201 Sum_probs=107.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHh
Q 016433 111 EYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAG 190 (389)
Q Consensus 111 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~ 190 (389)
.+.||||.|+..|+.++++.|+..+ +.+++..|..|.||||+|+..|+.++|++|+++|++++.++.. |.||||+|+.
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~l~~A~~ 81 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDT-TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSI-SDSPYLYAGA 81 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHH
T ss_pred ccccHHHHHHHhccHHHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHH
Confidence 4556666666666666666666655 1356666666666666666666666666666666666666665 6666666666
Q ss_pred cCCHHHHHHHH-HcCCCCCCCCCCCCcHHHHHHH---------Hh---------ccCCCCCHHHHHHHhCc-----HHHH
Q 016433 191 YVKPGVAKLLL-ELGADADVEDDRGLTPLALAKE---------IL---------RVTPKGNPMQFARRLGL-----EAVI 246 (389)
Q Consensus 191 ~g~~~~v~~Ll-~~ga~~~~~d~~g~tpL~~A~~---------~~---------~~~~g~t~l~~A~~~g~-----~~~v 246 (389)
.|+.+++++|+ ..+++++..|..|.||||+|+. ++ .+..|.||||+|+..|. .+++
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v 161 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIV 161 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence 66666666666 3345666666666666666654 11 12245566677777776 8899
Q ss_pred HHHHHcccC-------hHHHHHHHHHcCChhHHHHHHhc
Q 016433 247 RNLEEAVFE-------YAEVQEILEKRGKGDQLEYLVKW 278 (389)
Q Consensus 247 ~~Ll~~g~~-------~~~~~~~a~~~g~~~~~~~L~~~ 278 (389)
++|++.|++ +.++.++|+..|+.+++++|+++
T Consensus 162 ~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 162 KLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200 (201)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTC
T ss_pred HHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhc
Confidence 999988875 34688888899999999988864
No 39
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=3.4e-29 Score=215.97 Aligned_cols=152 Identities=20% Similarity=0.264 Sum_probs=134.3
Q ss_pred cccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHH
Q 016433 108 VVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHM 187 (389)
Q Consensus 108 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~ 187 (389)
.+..|.||||+||..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.. |.||||+
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~ 107 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVENF--DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFS-GKTPLMW 107 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHHH--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT-SCCHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhc--cccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCcHHHH
Confidence 4568999999999999999999999998 899999999999999999999999999999999999999998 9999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHH
Q 016433 188 AAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQ 260 (389)
Q Consensus 188 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~ 260 (389)
|+..|+.+++++|+++|++++.+|..|.||||+ |+..|+.+++++|++.|++ +.++.
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~----------------A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 171 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEHGANVNDRNLEGETPLIV----------------ASKYGRSEIVKKLLELGADISARDLTGLTAE 171 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHH----------------HHHHTCHHHHHHHHHTTCCTTCBCTTSCBHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH----------------HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 999999999999999999999999888877666 4557888888888888775 34678
Q ss_pred HHHHHcCChhHHHHHHhc
Q 016433 261 EILEKRGKGDQLEYLVKW 278 (389)
Q Consensus 261 ~~a~~~g~~~~~~~L~~~ 278 (389)
++|+..|+.+++++|+++
T Consensus 172 ~~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 172 ASARIFGRQEVIKIFTEV 189 (192)
T ss_dssp HHHHHTTCHHHHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHhc
Confidence 888888888888888764
No 40
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=3.3e-29 Score=228.21 Aligned_cols=144 Identities=22% Similarity=0.229 Sum_probs=126.3
Q ss_pred ccCCChHHHHHHHc---CCHHHHHHHHHhCCCCC-------cc----ccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc
Q 016433 109 VAEYESPWWTAAKK---ADDAALKEIIEAGDGRD-------VD----AVDNDGRTALLFVSGLGSEACVRVLAEAGTDLN 174 (389)
Q Consensus 109 ~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~-------~~----~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~ 174 (389)
+..|.||||+||.. |+.+++++|++.| ++ +| ..|..|+||||+|+..|+.++|++|+++|++++
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~g--a~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~ 128 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIALLLDVA--RKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ 128 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHHHHHHHH--HHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CcCCCCHHHHHHHHHhcCChHHHHHHHHhh--ccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 67899999999987 9999999999987 54 23 267799999999999999999999999999999
Q ss_pred cccC--------------CCCccHHHHHHhcCCHHHHHHHHH---cCCCCCCCCCCCCcHHHHHHHH-------------
Q 016433 175 HRDS--------------GGGLTALHMAAGYVKPGVAKLLLE---LGADADVEDDRGLTPLALAKEI------------- 224 (389)
Q Consensus 175 ~~d~--------------~~g~tpLh~A~~~g~~~~v~~Ll~---~ga~~~~~d~~g~tpL~~A~~~------------- 224 (389)
.++. . |.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~-g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~ 207 (273)
T 2pnn_A 129 AAANGDFFKKTKGRPGFYF-GELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTS 207 (273)
T ss_dssp CCBCSGGGSSCSSSCCCCS-CBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHH
T ss_pred ccccccccccccccccccC-CCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHH
Confidence 9997 7 9999999999999999999999 9999999999999999998851
Q ss_pred -----h---------------ccCCCCCHHHHHHHhCcHHHHHHHHHcccC
Q 016433 225 -----L---------------RVTPKGNPMQFARRLGLEAVIRNLEEAVFE 255 (389)
Q Consensus 225 -----~---------------~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~ 255 (389)
+ .+..|.||||+|+..|+.++|++|+++|+.
T Consensus 208 ~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 208 MYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH 258 (273)
T ss_dssp HHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred HHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCC
Confidence 1 344677888888888888888888887773
No 41
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=2.6e-29 Score=210.42 Aligned_cols=147 Identities=24% Similarity=0.311 Sum_probs=119.8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHh
Q 016433 111 EYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAG 190 (389)
Q Consensus 111 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~ 190 (389)
...||||.|+..|+.+++++|++.| ++++.+|..|+||||+|+. |+.+++++|+++|++++.+|.. |+||||+|+.
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~ 79 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNN--VNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRT-GFAVIHDAAR 79 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSC--CCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCC--CCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHH
Confidence 4679999999999999999999988 8999999999999999999 9999999999999999999999 9999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccC--------hHHHHHH
Q 016433 191 YVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE--------YAEVQEI 262 (389)
Q Consensus 191 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~--------~~~~~~~ 262 (389)
.|+.+++++|+++|++++.+|..|+||||+|+. .|+.+++++|++.|++ +.++.++
T Consensus 80 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~----------------~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~ 143 (162)
T 1ihb_A 80 AGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAK----------------EGHLRVVEFLVKHTASNVGHRNHKGDTACDL 143 (162)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH----------------TTCHHHHHHHHHHSCCCTTCCCTTSCCHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH----------------cCCHHHHHHHHHccCCCCCCcCCCCCcHHHH
Confidence 999999999999999999999998888777654 4555555555555442 2345555
Q ss_pred HHHcCChhHHHHHHh
Q 016433 263 LEKRGKGDQLEYLVK 277 (389)
Q Consensus 263 a~~~g~~~~~~~L~~ 277 (389)
|+..|+.+++++|++
T Consensus 144 A~~~~~~~~~~~Ll~ 158 (162)
T 1ihb_A 144 ARLYGRNEVVSLMQA 158 (162)
T ss_dssp HHHTTCHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHH
Confidence 555555555555554
No 42
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=1.8e-29 Score=224.88 Aligned_cols=185 Identities=21% Similarity=0.180 Sum_probs=155.5
Q ss_pred cCCCCChHHHHHHHcCCCCCCccccCcc-----cccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcH
Q 016433 76 RALEDATGMEYLIEWKDGHAPSWVPQDY-----IAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTA 150 (389)
Q Consensus 76 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~-----~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~ 150 (389)
.+..|.+++++++..++.....++.... .....+..|.||||+|+..|+.+++++|+++| ++++.+|..|.||
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~ 81 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG--CDPELRDFRGNTP 81 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCC--CCSCCCCTTCCCH
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCCCH
Confidence 3445789999999988877666554432 34556778999999999999999999999998 9999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCC------cccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCC-CCCcHHHHHHH
Q 016433 151 LLFVSGLGSEACVRVLAEAGTD------LNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDD-RGLTPLALAKE 223 (389)
Q Consensus 151 Lh~A~~~g~~~~v~~Ll~~ga~------~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~tpL~~A~~ 223 (389)
||+|+..|+.+++++|++.|++ ++..+.. |.||||+|+..|+.+++++|+++|++++.++. .|.||||+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~--- 157 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYN-GHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHL--- 157 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTT-CCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHH---
T ss_pred HHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH---
Confidence 9999999999999999999876 5777888 99999999999999999999999999999887 77777655
Q ss_pred HhccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHHHHHcCChhHHHHHHhcc
Q 016433 224 ILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEILEKRGKGDQLEYLVKWR 279 (389)
Q Consensus 224 ~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a~~~g~~~~~~~L~~~~ 279 (389)
|+..|+.++|++|+++|++ +.++.++|+..|+.+++++|+++.
T Consensus 158 -------------A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~g 207 (236)
T 1ikn_D 158 -------------AVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLT 207 (236)
T ss_dssp -------------HHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTS
T ss_pred -------------HHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcc
Confidence 5558889999999998875 456778888889999999888653
No 43
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=8.8e-29 Score=214.60 Aligned_cols=170 Identities=23% Similarity=0.294 Sum_probs=147.3
Q ss_pred HHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCc
Q 016433 70 SKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRT 149 (389)
Q Consensus 70 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t 149 (389)
..+.++... +.+.+.+++..+. ......+.+|.||||+|+..|+.+++++|+++| ++++.+|..|.|
T Consensus 8 ~L~~A~~~g-~~~~v~~ll~~~~----------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t 74 (201)
T 3hra_A 8 ALLEAANQR-DTKKVKEILQDTT----------YQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRG--ADINLQNSISDS 74 (201)
T ss_dssp HHHHHHHTT-CHHHHHHHHTCTT----------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCC
T ss_pred HHHHHHHhc-cHHHHHHHHHcCC----------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCCCCCCCC
Confidence 334443433 4777777776432 233445678999999999999999999999999 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHH-hcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHH----
Q 016433 150 ALLFVSGLGSEACVRVLA-EAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELG-ADADVEDDRGLTPLALAKE---- 223 (389)
Q Consensus 150 ~Lh~A~~~g~~~~v~~Ll-~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpL~~A~~---- 223 (389)
|||+|+..|+.+++++|+ ..+++++..+.. |.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+.
T Consensus 75 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~ 153 (201)
T 3hra_A 75 PYLYAGAQGRTEILAYMLKHATPDLNKHNRY-GGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREG 153 (201)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCCCTTCCCTT-SCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCC
T ss_pred HHHHHHHcCCHHHHHHHHhccCcccccccCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccc
Confidence 999999999999999999 557899999999 999999999999999999999999 9999999999999999983
Q ss_pred ----------H--------hccCCCCCHHHHHHHhCcHHHHHHHHHcc
Q 016433 224 ----------I--------LRVTPKGNPMQFARRLGLEAVIRNLEEAV 253 (389)
Q Consensus 224 ----------~--------~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g 253 (389)
+ ..+..|.||||+|+..|+.+++++|+++|
T Consensus 154 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 154 NQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp SHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred hhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 1 12357889999999999999999999876
No 44
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=9.7e-29 Score=208.13 Aligned_cols=149 Identities=21% Similarity=0.211 Sum_probs=133.7
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHh
Q 016433 111 EYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAG 190 (389)
Q Consensus 111 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~ 190 (389)
.|.||||.|+..|+.++++.|++.+ .+++.+|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~ 78 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQE--NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKG-RESALSLACS 78 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHS--SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcC--CCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCC-CCcHHHHHHH
Confidence 5789999999999999999999998 899999999999999999999999999999999999999999 9999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHHH
Q 016433 191 YVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEIL 263 (389)
Q Consensus 191 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a 263 (389)
.|+.+++++|+++|++++.+|..|.||||+| +..|+.+++++|++.|++ +.++.++|
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A----------------~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A 142 (167)
T 3v31_A 79 KGYTDIVKMLLDCGVDVNEYDWNGGTPLLYA----------------VHGNHVKCVKMLLESGADPTIETDSGYNSMDLA 142 (167)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCTTSCCHHHHH----------------HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCcCCCCCCCHHHHH----------------HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 9999999999999999999998888886665 457888888888888774 34677888
Q ss_pred HHcCChhHHHHHHhc
Q 016433 264 EKRGKGDQLEYLVKW 278 (389)
Q Consensus 264 ~~~g~~~~~~~L~~~ 278 (389)
...|+.+++++|+++
T Consensus 143 ~~~~~~~~~~~L~~~ 157 (167)
T 3v31_A 143 VALGYRSVQQVIESH 157 (167)
T ss_dssp HHHTCHHHHHHHHHH
T ss_pred HHcCcHHHHHHHHHH
Confidence 888888888888754
No 45
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.96 E-value=6.3e-29 Score=220.30 Aligned_cols=173 Identities=24% Similarity=0.261 Sum_probs=151.9
Q ss_pred HHHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCC
Q 016433 68 EVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDG 147 (389)
Q Consensus 68 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g 147 (389)
.+..++++...+ .+++++|++.+ ......+..|.||||+|+..|+.+++++|+++| ++++.+|..|
T Consensus 41 ~t~L~~A~~~g~-~~~v~~Ll~~g-----------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g 106 (231)
T 3aji_A 41 RTALHWACSAGH-TEIVEFLLQLG-----------VPVNDKDDAGWSPLHIAASAGXDEIVKALLVKG--AHVNAVNQNG 106 (231)
T ss_dssp CCHHHHHHHHTC-HHHHHHHHHTT-----------CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTS
T ss_pred CCHHHHHHHcCc-HHHHHHHHHhC-----------CCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcC--CCCCCCCCCC
Confidence 334444444443 77777777654 233445678999999999999999999999999 9999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH----
Q 016433 148 RTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKE---- 223 (389)
Q Consensus 148 ~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~---- 223 (389)
.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 107 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 185 (231)
T 3aji_A 107 CTPLHYAASKNRHEIAVMLLEGGANPDAKDHY-DATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERV 185 (231)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCH
Confidence 99999999999999999999999999999999 9999999999999999999999999999999999999999986
Q ss_pred -----H--------hccCCCCCHHHHHHHhCcHHHHHHHHHcccC
Q 016433 224 -----I--------LRVTPKGNPMQFARRLGLEAVIRNLEEAVFE 255 (389)
Q Consensus 224 -----~--------~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~ 255 (389)
+ ..+..|.|||++|+..++.+++++|+++|++
T Consensus 186 ~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 186 EEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 1 2345789999999999999999999998875
No 46
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=4.2e-29 Score=225.25 Aligned_cols=164 Identities=19% Similarity=0.180 Sum_probs=147.1
Q ss_pred CChHHHHHHHcCCHH----HHHHHHHhCCCCCccc----cCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCcccc----
Q 016433 112 YESPWWTAAKKADDA----ALKEIIEAGDGRDVDA----VDNDGRTALLFVSGL---GSEACVRVLAEAGTDLNHR---- 176 (389)
Q Consensus 112 g~t~L~~A~~~g~~~----~v~~Ll~~g~~~~~~~----~d~~g~t~Lh~A~~~---g~~~~v~~Ll~~ga~~~~~---- 176 (389)
|+||||.||..|+.+ ++++|++.| ++++. +|..|+||||+|+.. |+.++|++|++.|++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g--~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 79 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNS--KYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLV 79 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHT--CCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcC--CCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhc
Confidence 789999999999997 667777788 99998 899999999999999 9999999999999887743
Q ss_pred -------cCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCC-------------CCcHHHHHHH---------Hhc-
Q 016433 177 -------DSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDR-------------GLTPLALAKE---------ILR- 226 (389)
Q Consensus 177 -------d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~-------------g~tpL~~A~~---------~~~- 226 (389)
|.. |.||||+|+..|+.+++++|+++|++++.+|.. |.||||+|+. ++.
T Consensus 80 ~~~~~~~d~~-g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 158 (256)
T 2etb_A 80 NAQCTDEFYQ-GHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLEN 158 (256)
T ss_dssp GCCCCSTTTT-TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred cccccccccc-CCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 367 999999999999999999999999999999886 9999999986 344
Q ss_pred ----------cCCCCCHHHHHHH--hCcHH-------HHHHHHHcccCh--------------HHHHHHHHHcCChhHHH
Q 016433 227 ----------VTPKGNPMQFARR--LGLEA-------VIRNLEEAVFEY--------------AEVQEILEKRGKGDQLE 273 (389)
Q Consensus 227 ----------~~~g~t~l~~A~~--~g~~~-------~v~~Ll~~g~~~--------------~~~~~~a~~~g~~~~~~ 273 (389)
+..|.||||+|+. .++.+ ++++|++.|++. .++.++|+..|+.++++
T Consensus 159 ~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~ 238 (256)
T 2etb_A 159 PHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFR 238 (256)
T ss_dssp SSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred cccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHH
Confidence 2368899999999 78888 999999988755 47899999999999999
Q ss_pred HHHhc
Q 016433 274 YLVKW 278 (389)
Q Consensus 274 ~L~~~ 278 (389)
+|+++
T Consensus 239 ~Ll~~ 243 (256)
T 2etb_A 239 HILQR 243 (256)
T ss_dssp HHHHH
T ss_pred HHHhC
Confidence 99964
No 47
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=3e-28 Score=205.72 Aligned_cols=150 Identities=29% Similarity=0.383 Sum_probs=134.9
Q ss_pred cCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHH
Q 016433 110 AEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAA 189 (389)
Q Consensus 110 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~ 189 (389)
..+.|+||.||..|+.+++++|+++| +++|.+|..|.||||+|+..|+.+++++|+++|++++..|.. |.||||+|+
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~ 88 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANG--ADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHA-GMTPLRLAA 88 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHH
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC-CCCHHHHHH
Confidence 35679999999999999999999999 999999999999999999999999999999999999999999 999999999
Q ss_pred hcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHH
Q 016433 190 GYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEI 262 (389)
Q Consensus 190 ~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~ 262 (389)
..|+.+++++|+++|++++.+|..|.||||+ |+..|+.+++++|++.|++ +.++.++
T Consensus 89 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~----------------A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 152 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGADVNANDMEGHTPLHL----------------AAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDI 152 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH----------------HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH----------------HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 9999999999999999999999888877666 4558888888888888875 4567888
Q ss_pred HHHcCChhHHHHHHhc
Q 016433 263 LEKRGKGDQLEYLVKW 278 (389)
Q Consensus 263 a~~~g~~~~~~~L~~~ 278 (389)
|...|+.+++++|++.
T Consensus 153 A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 153 SIDNGNEDLAEILQKL 168 (169)
T ss_dssp HHHTTCHHHHHHHHTC
T ss_pred HHHhCCHHHHHHHHHc
Confidence 8888888888888753
No 48
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=3.4e-29 Score=226.35 Aligned_cols=147 Identities=20% Similarity=0.211 Sum_probs=127.5
Q ss_pred ccCCChHHHHHH---HcCCHHHHHHHHHhCC---------CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccc
Q 016433 109 VAEYESPWWTAA---KKADDAALKEIIEAGD---------GRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHR 176 (389)
Q Consensus 109 ~~~g~t~L~~A~---~~g~~~~v~~Ll~~g~---------~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~ 176 (389)
+..|.||||+|+ ..|+.+++++|++.|. ..+++..|..|+||||+||..|+.++|++|+++|++++..
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 122 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ 122 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcc
Confidence 367999999999 6799999999999861 1234555668999999999999999999999999999999
Q ss_pred c--------------CCCCccHHHHHHhcCCHHHHHHHHH---cCCCCCCCCCCCCcHHHHHHHH---------------
Q 016433 177 D--------------SGGGLTALHMAAGYVKPGVAKLLLE---LGADADVEDDRGLTPLALAKEI--------------- 224 (389)
Q Consensus 177 d--------------~~~g~tpLh~A~~~g~~~~v~~Ll~---~ga~~~~~d~~g~tpL~~A~~~--------------- 224 (389)
+ .. |+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..
T Consensus 123 ~~~~~~~~~~~~~~~~~-g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v 201 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFYF-GELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMY 201 (260)
T ss_dssp CEECCCSSSCCCCSCCS-CSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHH
T ss_pred ccccccCcccccccccC-CCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHH
Confidence 9 57 9999999999999999999999 9999999999999999999831
Q ss_pred ------------------hccCCCCCHHHHHHHhCcHHHHHHHHHcccCh
Q 016433 225 ------------------LRVTPKGNPMQFARRLGLEAVIRNLEEAVFEY 256 (389)
Q Consensus 225 ------------------~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~ 256 (389)
..+..|.||||+|+..|+.++|++|+++|.+.
T Consensus 202 ~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 202 DLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp HHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence 13456778888888888888888888887654
No 49
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=4e-28 Score=214.54 Aligned_cols=164 Identities=21% Similarity=0.226 Sum_probs=147.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCCCCc-cccCCCCCcHHHHHHHcCCHHHHHHHHhcC--CCccc-ccCCCCccHHHH
Q 016433 112 YESPWWTAAKKADDAALKEIIEAGDGRDV-DAVDNDGRTALLFVSGLGSEACVRVLAEAG--TDLNH-RDSGGGLTALHM 187 (389)
Q Consensus 112 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g--a~~~~-~d~~~g~tpLh~ 187 (389)
|+||||.||..|+.++++.|++.+ .++ +.+|..|.||||+|+..|+.+++++|++.| ++++. .+.. |+||||+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~-g~t~L~~ 78 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSK--PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDS-GWTPFHI 78 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHC--GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTT-SCCHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcC--ccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCC-CCCHHHH
Confidence 689999999999999999999998 554 458999999999999999999999999999 66666 7788 9999999
Q ss_pred HHhcCCHHHHHHHHHcC--CCCCCCCCCCCcHHHHHHH---------Hh--------ccCCCCCHHHHHHHhCcHHHHHH
Q 016433 188 AAGYVKPGVAKLLLELG--ADADVEDDRGLTPLALAKE---------IL--------RVTPKGNPMQFARRLGLEAVIRN 248 (389)
Q Consensus 188 A~~~g~~~~v~~Ll~~g--a~~~~~d~~g~tpL~~A~~---------~~--------~~~~g~t~l~~A~~~g~~~~v~~ 248 (389)
|+..|+.+++++|+++| ++++..|..|.||||+|+. ++ .+..|.||||+|+..|+.+++++
T Consensus 79 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 158 (228)
T 2dzn_A 79 ACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIEL 158 (228)
T ss_dssp HHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 99999999999999998 9999999999999999986 22 23468899999999999999999
Q ss_pred HHHcc-c-------ChHHHHHHHHHcCChhHHHHHH-hc
Q 016433 249 LEEAV-F-------EYAEVQEILEKRGKGDQLEYLV-KW 278 (389)
Q Consensus 249 Ll~~g-~-------~~~~~~~~a~~~g~~~~~~~L~-~~ 278 (389)
|++.| + .+.++.++|+..|+.+++++|+ +.
T Consensus 159 Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ 197 (228)
T 2dzn_A 159 LCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKY 197 (228)
T ss_dssp HHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhc
Confidence 99998 4 3567999999999999999999 44
No 50
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=3.7e-28 Score=228.32 Aligned_cols=204 Identities=17% Similarity=0.087 Sum_probs=165.6
Q ss_pred CCCCCChHHHHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCC
Q 016433 60 QNDDESYGEVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRD 139 (389)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 139 (389)
++..+..+.+..++++...+ .+++++|++.+. .....+..|.||||+|+..|+.+++++|+++| ++
T Consensus 51 ~~~~d~~g~t~L~~A~~~g~-~~~v~~Ll~~g~-----------~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g--~~ 116 (351)
T 3utm_A 51 CHASDGRKSTPLHLAAGYNR-VRIVQLLLQHGA-----------DVHAKDKGGLVPLHNACSYGHYEVTELLLKHG--AC 116 (351)
T ss_dssp CCCSSTTCCCHHHHHHHTTC-HHHHHHHHHTTC-----------CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT--CC
T ss_pred cccCCCCCCCHHHHHHHcCC-HHHHHHHHHcCC-----------CCCccCCCCCcHHHHHHHCCCHHHHHHHHHCC--CC
Confidence 33444555566666666554 888888887642 33445678999999999999999999999999 99
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccc------------------------------------------
Q 016433 140 VDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRD------------------------------------------ 177 (389)
Q Consensus 140 ~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d------------------------------------------ 177 (389)
++.+|..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 117 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (351)
T 3utm_A 117 VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKK 196 (351)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHH
Confidence 99999999999999999999999999999999988654
Q ss_pred ------------CCCCccHHHHHHhc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHH---------h--------
Q 016433 178 ------------SGGGLTALHMAAGY---VKPGVAKLLLELGADADVEDDRGLTPLALAKEI---------L-------- 225 (389)
Q Consensus 178 ------------~~~g~tpLh~A~~~---g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~---------~-------- 225 (389)
.. |.||||+|+.. +..+++++|++.|++++.+|..|+||||+|+.. +
T Consensus 197 ~l~~~~~~~~~~~~-~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~ 275 (351)
T 3utm_A 197 TLALEIINFKQPQS-HETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNA 275 (351)
T ss_dssp HTTTCCTTCCCTTT-CCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHhhcccccCCCC-CCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 34 67999999999 558999999999999999999999999999862 1
Q ss_pred ccCCCCCHHHHHHHhCcHHHHHHHHHcccChHHHH---HHHHHcCChhHHHHHHhc
Q 016433 226 RVTPKGNPMQFARRLGLEAVIRNLEEAVFEYAEVQ---EILEKRGKGDQLEYLVKW 278 (389)
Q Consensus 226 ~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~---~~a~~~g~~~~~~~L~~~ 278 (389)
.+..|.||||+|+..|+.++|++|+++|++..... ..+...++.+++++|.+.
T Consensus 276 ~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a~~~~~~~l~~~ 331 (351)
T 3utm_A 276 LDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNEAVQQILSES 331 (351)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHSCHHHHHHHHHC
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhhhHHHHHHHHhc
Confidence 34578999999999999999999999998633211 113333467777777753
No 51
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=1.4e-28 Score=233.51 Aligned_cols=169 Identities=18% Similarity=0.129 Sum_probs=133.8
Q ss_pred cccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCcc
Q 016433 104 IAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLT 183 (389)
Q Consensus 104 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~t 183 (389)
+....+.+|.||||+||..|+.++|++|++.| ++++.+|..|.||||+||..|+.++|++|+++|++++.. . |.|
T Consensus 12 ~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~-g~t 86 (364)
T 3ljn_A 12 NRIKSDDENMEKIHVAARKGQTDEVRRLIETG--VSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLW--H-GQK 86 (364)
T ss_dssp ----CCHHHHHHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCB--T-TBC
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcccc--C-CCC
Confidence 33445678999999999999999999999999 999999999999999999999999999999999977664 4 899
Q ss_pred HHHHHHhcCCHHHHHHHHHc----CCCCCC-----------------CCCCCCcHHHHHHHHh-----------------
Q 016433 184 ALHMAAGYVKPGVAKLLLEL----GADADV-----------------EDDRGLTPLALAKEIL----------------- 225 (389)
Q Consensus 184 pLh~A~~~g~~~~v~~Ll~~----ga~~~~-----------------~d~~g~tpL~~A~~~~----------------- 225 (389)
|||+|+..|+.+++++|+++ |++++. .|..|.||||+|+...
T Consensus 87 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~ 166 (364)
T 3ljn_A 87 PIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASP 166 (364)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCT
T ss_pred HHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCC
Confidence 99999999999999999999 888776 7777888877776521
Q ss_pred --ccCCCCCHHHHHHHhCcHHHHHHHHHcccC------------hHHHHHHHHHcCChhHHHHHHh
Q 016433 226 --RVTPKGNPMQFARRLGLEAVIRNLEEAVFE------------YAEVQEILEKRGKGDQLEYLVK 277 (389)
Q Consensus 226 --~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~------------~~~~~~~a~~~g~~~~~~~L~~ 277 (389)
.+..|.||||+|+..|+.++|++|++.|++ +.++.++|+..|+.+++++|++
T Consensus 167 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 232 (364)
T 3ljn_A 167 TAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVE 232 (364)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHT
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 123456666666666666666666666554 3355666666666666666663
No 52
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.9e-29 Score=229.59 Aligned_cols=149 Identities=19% Similarity=0.209 Sum_probs=129.6
Q ss_pred ccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCc
Q 016433 103 YIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGL 182 (389)
Q Consensus 103 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~ 182 (389)
.+.+..+.+|+||||+||..|+.++|++|++.| ++++.++..|.||+|+|+..++.+++++|++.|+++|.+|.. |+
T Consensus 77 advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~--a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~-g~ 153 (269)
T 4b93_B 77 LGVNVTSQDGSSPLHVAALHGRADLIPLLLKHG--ANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLS-GN 153 (269)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT-CC
T ss_pred CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcC--CCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCC-CC
Confidence 445556789999999999999999999999999 999999999999999999999999999999999999999999 99
Q ss_pred cHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH---------H--------hccCCCCCHHHHHHHhCc-HH
Q 016433 183 TALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKE---------I--------LRVTPKGNPMQFARRLGL-EA 244 (389)
Q Consensus 183 tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~---------~--------~~~~~g~t~l~~A~~~g~-~~ 244 (389)
||||+||..|+.++|++|+++|++++.+|..|+||||+|+. + ..+..|.||||+|+++|+ .+
T Consensus 154 TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~ 233 (269)
T 4b93_B 154 TPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIME 233 (269)
T ss_dssp CHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHH
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHH
Confidence 99999999999999999999999999999999999999986 2 234578999999998886 34
Q ss_pred HHHHHHHccc
Q 016433 245 VIRNLEEAVF 254 (389)
Q Consensus 245 ~v~~Ll~~g~ 254 (389)
++++|...++
T Consensus 234 lL~~l~~~~~ 243 (269)
T 4b93_B 234 LLQVVPSCVA 243 (269)
T ss_dssp HTTC------
T ss_pred HHHHHHHhch
Confidence 4444444443
No 53
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=3.7e-28 Score=209.42 Aligned_cols=164 Identities=26% Similarity=0.261 Sum_probs=138.6
Q ss_pred HHHhccCCCCChHHHHHHHcCCCCCCccccC-cccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCc
Q 016433 71 KIIGSRALEDATGMEYLIEWKDGHAPSWVPQ-DYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRT 149 (389)
Q Consensus 71 ~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t 149 (389)
.+++.++..+.+++++++..++.....++.. .......+..|.||||+|+..|+.+++++|++.| ++++.+|..|.|
T Consensus 26 ~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t 103 (192)
T 2rfm_A 26 FLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKG--SNVNTKDFSGKT 103 (192)
T ss_dssp HHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT--CCTTCCCTTSCC
T ss_pred HHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCC--CCCCCCCCCCCc
Confidence 3444555556666666666654443333222 2334455678999999999999999999999999 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCC
Q 016433 150 ALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTP 229 (389)
Q Consensus 150 ~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~ 229 (389)
|||+|+..|+.+++++|+++|++++.+|.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~--------- 173 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHGANVNDRNLE-GETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEAS--------- 173 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSCCCTT-CCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHH---------
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH---------
Confidence 999999999999999999999999999999 9999999999999999999999999999999999888666
Q ss_pred CCCHHHHHHHhCcHHHHHHHHHcc
Q 016433 230 KGNPMQFARRLGLEAVIRNLEEAV 253 (389)
Q Consensus 230 g~t~l~~A~~~g~~~~v~~Ll~~g 253 (389)
|+..|+.+++++|++.|
T Consensus 174 -------A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 174 -------ARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp -------HHHTTCHHHHHHHHHHH
T ss_pred -------HHHhCcHHHHHHHHhcc
Confidence 55699999999999876
No 54
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=1.8e-28 Score=199.54 Aligned_cols=132 Identities=25% Similarity=0.267 Sum_probs=122.6
Q ss_pred ccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccH
Q 016433 105 AKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTA 184 (389)
Q Consensus 105 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tp 184 (389)
....+..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+. |+.+++++|+++|++++.+|...|+||
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~ 81 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAG--ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRP 81 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCH
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcC--CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCH
Confidence 3445678999999999999999999999999 9999999999999999999 999999999999999999998747999
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccC
Q 016433 185 LHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE 255 (389)
Q Consensus 185 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~ 255 (389)
||+|+..|+.+++++|+++|++++.+|..|.||||+ |+..|+.+++++|+++|++
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~----------------A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDL----------------AEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHH----------------HHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHH----------------HHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999998888666 5558999999999999985
No 55
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=8.5e-28 Score=202.96 Aligned_cols=154 Identities=27% Similarity=0.307 Sum_probs=135.8
Q ss_pred HHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCC
Q 016433 69 VSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGR 148 (389)
Q Consensus 69 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~ 148 (389)
...+.+++.. ..+++++|++.+. .....+..|.||||+|+..|+.+++++|+++| ++++.+|..|.
T Consensus 16 ~~l~~A~~~g-~~~~v~~Ll~~g~-----------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~ 81 (169)
T 2y1l_E 16 KKLLEAARAG-RDDEVRILMANGA-----------DVNAEDASGWTPLHLAAFNGHLEIVEVLLKNG--ADVNAVDHAGM 81 (169)
T ss_dssp HHHHHHHHHT-CHHHHHHHHHTTC-----------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSC
T ss_pred chHHHHHHcC-CHHHHHHHHHCCC-----------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCccCCCCC
Confidence 3444444444 5899999998752 23345678999999999999999999999999 99999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccC
Q 016433 149 TALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVT 228 (389)
Q Consensus 149 t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~ 228 (389)
||||+|+..|+.+++++|+++|++++.+|.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 82 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~-------- 152 (169)
T 2y1l_E 82 TPLRLAALFGHLEIVEVLLKNGADVNANDME-GHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDI-------- 152 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH--------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH--------
Confidence 9999999999999999999999999999999 9999999999999999999999999999999888877655
Q ss_pred CCCCHHHHHHHhCcHHHHHHHHHcc
Q 016433 229 PKGNPMQFARRLGLEAVIRNLEEAV 253 (389)
Q Consensus 229 ~g~t~l~~A~~~g~~~~v~~Ll~~g 253 (389)
|+..|+.+++++|++.|
T Consensus 153 --------A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 153 --------SIDNGNEDLAEILQKLN 169 (169)
T ss_dssp --------HHHTTCHHHHHHHHTC-
T ss_pred --------HHHhCCHHHHHHHHHcC
Confidence 56699999999999876
No 56
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=7.7e-28 Score=199.76 Aligned_cols=144 Identities=24% Similarity=0.284 Sum_probs=125.6
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhc
Q 016433 112 YESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGY 191 (389)
Q Consensus 112 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~ 191 (389)
+.|+||.|+..|+.+++++|++.| ++++ .|..|.||||+|+..|+.+++++|++.|++++.++.. |+||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g--~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~ 77 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANG--APFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKV-DRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHT--CCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTT-CCCHHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcC--CCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHHc
Confidence 468999999999999999999998 7766 5888999999999999999999999999999999998 99999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHHHH
Q 016433 192 VKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEILE 264 (389)
Q Consensus 192 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a~ 264 (389)
|+.+++++|+++|++++.+|..|.||||+ |+..|+.+++++|++.|++ +.++.++|.
T Consensus 78 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~----------------A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 141 (153)
T 1awc_B 78 GHANIVEVLLKHGADVNAKDMLKMTALHW----------------ATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISI 141 (153)
T ss_dssp TCHHHHHHHHTTTCCTTCCCTTSCCHHHH----------------HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ChHHHHHHHHHcCCCCCCCCCCCCCHHHH----------------HHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 99999999999999999998888777665 4558888888888888874 357888888
Q ss_pred HcCChhHHHHH
Q 016433 265 KRGKGDQLEYL 275 (389)
Q Consensus 265 ~~g~~~~~~~L 275 (389)
..|+.+++++|
T Consensus 142 ~~~~~~i~~~L 152 (153)
T 1awc_B 142 DNGNEDLAEIL 152 (153)
T ss_dssp HTTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 88888888876
No 57
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=1.1e-28 Score=224.70 Aligned_cols=176 Identities=18% Similarity=0.176 Sum_probs=147.7
Q ss_pred ccccccCCChHHHHHHHcCCHHHHHHHHHhC--CCCCcc----ccCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCc--
Q 016433 105 AKDVVAEYESPWWTAAKKADDAALKEIIEAG--DGRDVD----AVDNDGRTALLFVSGL---GSEACVRVLAEAGTDL-- 173 (389)
Q Consensus 105 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~----~~d~~g~t~Lh~A~~~---g~~~~v~~Ll~~ga~~-- 173 (389)
....+..|.||||.||..|+.++|+.|++.+ .+++++ ..|..|+||||+|+.. |+.++|++|+++|+++
T Consensus 6 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~ 85 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDS 85 (273)
T ss_dssp -----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTC
T ss_pred CCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccc
Confidence 4456789999999999999999999988742 116665 4588999999999987 9999999999998653
Q ss_pred -----cc----ccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCC--------------CCCcHHHHHHH-------
Q 016433 174 -----NH----RDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDD--------------RGLTPLALAKE------- 223 (389)
Q Consensus 174 -----~~----~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~--------------~g~tpL~~A~~------- 223 (389)
+. .|.. |+||||+|+..|+.+++++|+++|++++..+. .|.||||+|+.
T Consensus 86 ~~~~i~~~~~~~d~~-g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v 164 (273)
T 2pnn_A 86 LKQFVNASYTDSYYK-GQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIV 164 (273)
T ss_dssp HHHHHTCCCCSTTTT-TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHH
T ss_pred hhHHhhcccccccCC-CCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHH
Confidence 32 5667 99999999999999999999999999999997 79999999986
Q ss_pred --Hhc-----------cCCCCCHHHHHHHhCc---------HHHHHHHHHcccCh--------------HHHHHHHHHcC
Q 016433 224 --ILR-----------VTPKGNPMQFARRLGL---------EAVIRNLEEAVFEY--------------AEVQEILEKRG 267 (389)
Q Consensus 224 --~~~-----------~~~g~t~l~~A~~~g~---------~~~v~~Ll~~g~~~--------------~~~~~~a~~~g 267 (389)
++. +..|.||||+|+..|+ .+++++|++.|++. .++.++|+..|
T Consensus 165 ~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g 244 (273)
T 2pnn_A 165 KFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSG 244 (273)
T ss_dssp HHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred HHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhC
Confidence 344 2367899999999998 89999999987643 47899999999
Q ss_pred ChhHHHHHHhccCC
Q 016433 268 KGDQLEYLVKWRDG 281 (389)
Q Consensus 268 ~~~~~~~L~~~~~~ 281 (389)
+.+++++|++....
T Consensus 245 ~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 245 KIGVLAYILQREIH 258 (273)
T ss_dssp CHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHCCCC
Confidence 99999999986543
No 58
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=1e-27 Score=202.88 Aligned_cols=147 Identities=24% Similarity=0.217 Sum_probs=91.2
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcC
Q 016433 113 ESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYV 192 (389)
Q Consensus 113 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g 192 (389)
.||||.|+..|+.++++.|++.++ ..++.+|..|+||||+|+..|+.++|++|+++|++++.++.. |.||||+|+..|
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~ 80 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGD-NLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKE-RESALSLASTGG 80 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCS-GGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT-CCCHHHHHHHTT
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCc-ccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhccc-CCCHHHHHHHCC
Confidence 466777777777777777776661 226666666777777777777777777777777777766666 677777777777
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHHHHH
Q 016433 193 KPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEILEK 265 (389)
Q Consensus 193 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a~~ 265 (389)
+.+++++|+++|++++.+|..|+||||+|+ ..|+.++|++|++.|++ +.++.++|..
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~----------------~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 144 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIYDWNGGTPLLYAV----------------RGNHVKCVEALLARGADLTTEADSGYTPMDLAVA 144 (172)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHH----------------HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHH----------------HcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 777777777777777666666666655443 34555555555555443 2234455555
Q ss_pred cCChhHHHHHHh
Q 016433 266 RGKGDQLEYLVK 277 (389)
Q Consensus 266 ~g~~~~~~~L~~ 277 (389)
.|+.+++++|++
T Consensus 145 ~~~~~~~~~L~~ 156 (172)
T 3v30_A 145 LGYRKVQQVIEN 156 (172)
T ss_dssp HTCHHHHHHHHH
T ss_pred hCcHHHHHHHHH
Confidence 555555555543
No 59
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=1.7e-27 Score=201.45 Aligned_cols=148 Identities=24% Similarity=0.261 Sum_probs=133.1
Q ss_pred CCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcC
Q 016433 79 EDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLG 158 (389)
Q Consensus 79 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g 158 (389)
+..+.++++++.+. ......+..|.||||+|+..|+.+++++|++.| ++++.+|..|.||||+|+..|
T Consensus 13 g~~~~v~~ll~~~~----------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 13 GELDQLKEHLRKGD----------NLVNKPDERGFTPLIWASAFGEIETVRFLLEWG--ADPHILAKERESALSLASTGG 80 (172)
T ss_dssp TCHHHHHHHHTTCS----------GGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHT--CCTTCCCTTCCCHHHHHHHTT
T ss_pred CCHHHHHHHHHcCc----------ccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCchhhcccCCCHHHHHHHCC
Confidence 34788888886542 123445678999999999999999999999999 999999999999999999999
Q ss_pred CHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHH
Q 016433 159 SEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFAR 238 (389)
Q Consensus 159 ~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~ 238 (389)
+.+++++|+++|++++.+|.. |+||||+|+..|+.+++++|+++|++++.+|..|.||||+ |+
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~----------------A~ 143 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIYDWN-GGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDL----------------AV 143 (172)
T ss_dssp CHHHHHHHHTTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH----------------HH
T ss_pred CHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH----------------HH
Confidence 999999999999999999999 9999999999999999999999999999999988887666 55
Q ss_pred HhCcHHHHHHHHHcccC
Q 016433 239 RLGLEAVIRNLEEAVFE 255 (389)
Q Consensus 239 ~~g~~~~v~~Ll~~g~~ 255 (389)
..|+.+++++|+++|++
T Consensus 144 ~~~~~~~~~~L~~~~~~ 160 (172)
T 3v30_A 144 ALGYRKVQQVIENHILK 160 (172)
T ss_dssp HHTCHHHHHHHHHHHHH
T ss_pred HhCcHHHHHHHHHHHHH
Confidence 68999999999999875
No 60
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.95 E-value=2.4e-28 Score=225.09 Aligned_cols=175 Identities=18% Similarity=0.178 Sum_probs=149.0
Q ss_pred HHHHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCC
Q 016433 67 GEVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDND 146 (389)
Q Consensus 67 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~ 146 (389)
+....+.++... ..+++++|++.+. ..+..+..|.||||+||..|+.+++++|+++| ++++.+|..
T Consensus 40 ~~t~l~~A~~~g-~~~~v~~Ll~~g~-----------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--a~~~~~~~~ 105 (299)
T 1s70_B 40 DGAVFLAACSSG-DTEEVLRLLERGA-----------DINYANVDGLTALHQACIDDNVDMVKFLVENG--ANINQPDNE 105 (299)
T ss_dssp HHHHHHHHHHHT-CHHHHHHHHHHCC-----------CTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTT
T ss_pred CccHHHHHHHcC-CHHHHHHHHHcCC-----------CCcccCCCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCCCCC
Confidence 444555555544 4899999998752 23345678999999999999999999999999 999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHc-CCCCC-----------------
Q 016433 147 GRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLEL-GADAD----------------- 208 (389)
Q Consensus 147 g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~~----------------- 208 (389)
|+||||+|+..|+.++|++|+++|++++..+.. |.||||+|+..++.++++.|+.. |++++
T Consensus 106 g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (299)
T 1s70_B 106 GWIPLHAAASCGYLDIAEYLISQGAHVGAVNSE-GDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQW 184 (299)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCC-CCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHH
Confidence 999999999999999999999999999999999 99999999999999999877754 45433
Q ss_pred ---------CCCCCCCcHHHHHHHH---------h--------ccCCCCCHHHHHHHhCcHHHHHHHHHcccCh
Q 016433 209 ---------VEDDRGLTPLALAKEI---------L--------RVTPKGNPMQFARRLGLEAVIRNLEEAVFEY 256 (389)
Q Consensus 209 ---------~~d~~g~tpL~~A~~~---------~--------~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~ 256 (389)
..+..|.||||+|+.. + .+..|.||||+|+..|+.++|++|+++|++.
T Consensus 185 l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~ 258 (299)
T 1s70_B 185 LNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDM 258 (299)
T ss_dssp HHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC
Confidence 3567899999999862 2 2357889999999999999999999999863
No 61
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=6.5e-28 Score=202.66 Aligned_cols=158 Identities=25% Similarity=0.274 Sum_probs=133.0
Q ss_pred hHHHHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCC
Q 016433 66 YGEVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDN 145 (389)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~ 145 (389)
.+....+.++... ..++++++++... ......+..|.||||+|+..|+.+++++|+++| ++++.+|.
T Consensus 7 ~~~~~l~~A~~~g-~~~~v~~ll~~~~----------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~ 73 (165)
T 3twr_A 7 EADRQLLEAAKAG-DVETVKKLCTVQS----------VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG--ADVHAKDK 73 (165)
T ss_dssp HHHHHHHHHHHHT-CHHHHHHHCCTTT----------TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCT
T ss_pred hhhHHHHHHHHhC-CHHHHHHHHHcCC----------CCccccccCCCCHHHHHHHcChHHHHHHHHhcC--CCCCccCC
Confidence 3444555544444 4788888876432 233445677899999999999999999999998 99999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHh
Q 016433 146 DGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEIL 225 (389)
Q Consensus 146 ~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~ 225 (389)
.|+||||+|+..|+.+++++|+++|++++.+|.. |+||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus 74 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a---- 148 (165)
T 3twr_A 74 GGLVPLHNACSYGHYEVAELLVKHGAVVNVADLW-KFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLV---- 148 (165)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGS----
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhH----
Confidence 9999999999999999999999999999999999 99999999999999999999999999999999998887764
Q ss_pred ccCCCCCHHHHHHHhCcHHHHHHHHHccc
Q 016433 226 RVTPKGNPMQFARRLGLEAVIRNLEEAVF 254 (389)
Q Consensus 226 ~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~ 254 (389)
+ .|+.+++++|++.|+
T Consensus 149 ------------~-~~~~~i~~~L~~~gA 164 (165)
T 3twr_A 149 ------------K-DGDTDIQDLLRGDAA 164 (165)
T ss_dssp ------------C-TTCHHHHHHHHTC--
T ss_pred ------------h-cCChHHHHHHhhccc
Confidence 3 388999999998875
No 62
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=1.9e-27 Score=200.15 Aligned_cols=154 Identities=25% Similarity=0.283 Sum_probs=135.7
Q ss_pred HHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcH
Q 016433 71 KIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTA 150 (389)
Q Consensus 71 ~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~ 150 (389)
.+.++... ..++++++++.+. .....+..|.||||+|+..|+.+++++|++.| ++++..|..|.||
T Consensus 7 L~~A~~~g-~~~~v~~ll~~~~-----------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~ 72 (167)
T 3v31_A 7 VHQLAAQG-EMLYLATRIEQEN-----------VINHTDEEGFTPLMWAAAHGQIAVVEFLLQNG--ADPQLLGKGRESA 72 (167)
T ss_dssp HHHHHHTT-CHHHHHHHHHHSS-----------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTCCCH
T ss_pred HHHHHHCC-CHHHHHHHHHcCC-----------CcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcC--CCCCCcCCCCCcH
Confidence 34444443 4788888887652 23445678999999999999999999999999 9999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCC
Q 016433 151 LLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPK 230 (389)
Q Consensus 151 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g 230 (389)
||+|+..|+.+++++|+++|++++.+|.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 73 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~---------- 141 (167)
T 3v31_A 73 LSLACSKGYTDIVKMLLDCGVDVNEYDWN-GGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDL---------- 141 (167)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH----------
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCcCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH----------
Confidence 99999999999999999999999999999 9999999999999999999999999999999988887665
Q ss_pred CCHHHHHHHhCcHHHHHHHHHcccC
Q 016433 231 GNPMQFARRLGLEAVIRNLEEAVFE 255 (389)
Q Consensus 231 ~t~l~~A~~~g~~~~v~~Ll~~g~~ 255 (389)
|+..|+.+++++|++++.+
T Consensus 142 ------A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 142 ------AVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp ------HHHHTCHHHHHHHHHHHHH
T ss_pred ------HHHcCcHHHHHHHHHHHHH
Confidence 5568999999999988753
No 63
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=1.1e-27 Score=198.92 Aligned_cols=141 Identities=25% Similarity=0.237 Sum_probs=128.1
Q ss_pred CCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHc
Q 016433 78 LEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGL 157 (389)
Q Consensus 78 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~ 157 (389)
.+..++++++++.+.. ...+..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..
T Consensus 12 ~g~~~~v~~Ll~~g~~------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~ 77 (153)
T 1awc_B 12 AGQDDEVRILMANGAP------------FTTDWLGTSPLHLAAQYGHFSTTEVLLRAG--VSRDARTKVDRTPLHMAASE 77 (153)
T ss_dssp HTCHHHHHHHHHHTCC------------CCCCTTCCCHHHHHHHHTCHHHHHHHHTTT--CCTTCCCTTCCCHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCC------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHc
Confidence 3458899999987631 113568999999999999999999999999 99999999999999999999
Q ss_pred CCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHH
Q 016433 158 GSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFA 237 (389)
Q Consensus 158 g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A 237 (389)
|+.+++++|+++|++++.+|.. |+||||+|+..|+.+++++|+++|++++.+|..|.||||+ |
T Consensus 78 ~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~----------------A 140 (153)
T 1awc_B 78 GHANIVEVLLKHGADVNAKDML-KMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDI----------------S 140 (153)
T ss_dssp TCHHHHHHHHTTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH----------------H
T ss_pred ChHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH----------------H
Confidence 9999999999999999999999 9999999999999999999999999999999988887665 5
Q ss_pred HHhCcHHHHHHH
Q 016433 238 RRLGLEAVIRNL 249 (389)
Q Consensus 238 ~~~g~~~~v~~L 249 (389)
+..|+.+++++|
T Consensus 141 ~~~~~~~i~~~L 152 (153)
T 1awc_B 141 IDNGNEDLAEIL 152 (153)
T ss_dssp HHTTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 569999999987
No 64
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.95 E-value=6.7e-26 Score=212.66 Aligned_cols=194 Identities=23% Similarity=0.201 Sum_probs=117.2
Q ss_pred HHHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccc-cCCChHHHHHHHcCCHHHHHHHHHhCCCCCcccc---
Q 016433 68 EVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVV-AEYESPWWTAAKKADDAALKEIIEAGDGRDVDAV--- 143 (389)
Q Consensus 68 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~--- 143 (389)
.+.++.++.. ++.++|++|++.|- +.+..+ ..|+||||+||..|+.++|++||++| ++++.+
T Consensus 26 ~t~L~~Av~~-g~~~~V~~LL~~Ga-----------dvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~g--a~~~~~~~~ 91 (337)
T 4g8k_A 26 NHLLIKAVQN-EDVDLVQQLLEGGA-----------NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG--ADPVLRKKN 91 (337)
T ss_dssp HHHHHHHHHT-TCHHHHHHHHHHTC-----------CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTT
T ss_pred ChHHHHHHHc-CCHHHHHHHHHCCC-----------CCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcC--CchhhhccC
Confidence 3444555444 45999999999762 122222 35899999999999999999999998 766554
Q ss_pred ------------------------------CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccc----------CCCCcc
Q 016433 144 ------------------------------DNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRD----------SGGGLT 183 (389)
Q Consensus 144 ------------------------------d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d----------~~~g~t 183 (389)
|..|+||||+|+..|+.+++++|+++|++++..+ .. |.|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~-g~T 170 (337)
T 4g8k_A 92 GATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKG-GAT 170 (337)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTC-SCC
T ss_pred CCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCC-CCc
Confidence 4555566666666666666666666666555432 23 556
Q ss_pred HHHHHHhcCCHHHHHHHHH-cCCCCCCCCCCCCcHHHHHHH-------------Hh--------ccCCCCCHHHHHHHhC
Q 016433 184 ALHMAAGYVKPGVAKLLLE-LGADADVEDDRGLTPLALAKE-------------IL--------RVTPKGNPMQFARRLG 241 (389)
Q Consensus 184 pLh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tpL~~A~~-------------~~--------~~~~g~t~l~~A~~~g 241 (389)
|||+|+..|+.++|++||+ .|++++.+|..|.||++.++. ++ .+..|.||||+|+..|
T Consensus 171 ~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~ 250 (337)
T 4g8k_A 171 ALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKK 250 (337)
T ss_dssp HHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTT
T ss_pred HHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhh
Confidence 6666666666666666654 356666666666666655432 11 1123455666666666
Q ss_pred cHHHHHHHHHc-cc-------ChHHHHHHHHHcCChhHHHHHH
Q 016433 242 LEAVIRNLEEA-VF-------EYAEVQEILEKRGKGDQLEYLV 276 (389)
Q Consensus 242 ~~~~v~~Ll~~-g~-------~~~~~~~~a~~~g~~~~~~~L~ 276 (389)
+.++|++|++. |+ ++.++.++|+..|+.+++++|+
T Consensus 251 ~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll 293 (337)
T 4g8k_A 251 HLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLC 293 (337)
T ss_dssp CHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred hhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 66666555543 32 2344555555666666555555
No 65
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=1.7e-28 Score=229.76 Aligned_cols=151 Identities=16% Similarity=0.073 Sum_probs=125.8
Q ss_pred ccccc-cccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCC---HHHHHHHHhcC-CCccccc
Q 016433 103 YIAKD-VVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGS---EACVRVLAEAG-TDLNHRD 177 (389)
Q Consensus 103 ~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~---~~~v~~Ll~~g-a~~~~~d 177 (389)
...+. .+..|.||||+||..|+.++|++||++| +++|.+|..|+||||+|+..|+ .++++.|++.+ ++++.+|
T Consensus 121 ~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~G--ad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d 198 (327)
T 1sw6_A 121 LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHG--SNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILED 198 (327)
T ss_dssp CCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEEC
T ss_pred CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCC
Confidence 34444 5789999999999999999999999999 9999999999999999999998 78888888886 8899999
Q ss_pred CCCCccHHHHHHh----cCCHHHHHHHHHc--------------------CCCCCCCCCCCCcHHHHHHH---------H
Q 016433 178 SGGGLTALHMAAG----YVKPGVAKLLLEL--------------------GADADVEDDRGLTPLALAKE---------I 224 (389)
Q Consensus 178 ~~~g~tpLh~A~~----~g~~~~v~~Ll~~--------------------ga~~~~~d~~g~tpL~~A~~---------~ 224 (389)
.. |+||||+|+. .|+.+++++|++. |++++.+|..|.||||+|+. .
T Consensus 199 ~~-g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n 277 (327)
T 1sw6_A 199 SM-NRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLN 277 (327)
T ss_dssp TT-CCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTT
T ss_pred CC-CCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCC
Confidence 99 9999999999 8999999999987 89999999999999999974 1
Q ss_pred hccCCCCCHHHHHHHhCcHHHHHHHHHcccCh
Q 016433 225 LRVTPKGNPMQFARRLGLEAVIRNLEEAVFEY 256 (389)
Q Consensus 225 ~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~ 256 (389)
..+..|.||||+|+..|+.++|++|+++|++.
T Consensus 278 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~ 309 (327)
T 1sw6_A 278 AQDSNGDTCLNIAARLGNISIVDALLDYGADP 309 (327)
T ss_dssp CCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCT
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 23457899999999999999999999999874
No 66
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=2.5e-27 Score=192.76 Aligned_cols=125 Identities=30% Similarity=0.406 Sum_probs=117.5
Q ss_pred cCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHH
Q 016433 110 AEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAA 189 (389)
Q Consensus 110 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~ 189 (389)
..+.||||+||..|+.+++++|++.| ++++.+|..|.||||+|+..|+.+++++|+++|++++.+|.. |.||||+|+
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~-g~t~L~~A~ 88 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANG--ADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAI-GFTPLHLAA 88 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC-CCCHHHHHH
Confidence 45789999999999999999999999 999999999999999999999999999999999999999999 999999999
Q ss_pred hcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcc
Q 016433 190 GYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAV 253 (389)
Q Consensus 190 ~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g 253 (389)
..|+.+++++|+++|++++.+|..|+||||+ |+..|+.+++++|++.|
T Consensus 89 ~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~----------------A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADVNAQDKFGKTAFDI----------------SIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH----------------HHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHcCCCCcCcCCCCCCHHHH----------------HHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999988887665 55699999999999876
No 67
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=6.2e-27 Score=186.93 Aligned_cols=126 Identities=41% Similarity=0.531 Sum_probs=119.7
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHh
Q 016433 111 EYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAG 190 (389)
Q Consensus 111 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~ 190 (389)
+|.||||+|+..|+.+++++|++.| ++++..|..|.||||+|+..|+.+++++|+++|++++.+|.. |.||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~l~~A~~ 77 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAG--ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAAR 77 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcC--CCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCC-CCcHHHHHHH
Confidence 5899999999999999999999999 999999999999999999999999999999999999999999 9999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccC
Q 016433 191 YVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE 255 (389)
Q Consensus 191 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~ 255 (389)
.|+.+++++|+++|++++.+|..|.||||+ |+..|+.+++++|+++|++
T Consensus 78 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~----------------A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 78 NGHLEVVKLLLEAGADVNAKDKNGRTPLHL----------------AARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHH----------------HHHTTCHHHHHHHHHHTCC
T ss_pred cChHHHHHHHHHcCCCCcccCCCCCCHHHH----------------HHHcCcHHHHHHHHHcCCC
Confidence 999999999999999999999888887665 5568999999999999985
No 68
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=4.6e-27 Score=195.44 Aligned_cols=146 Identities=28% Similarity=0.304 Sum_probs=125.9
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhc
Q 016433 112 YESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGY 191 (389)
Q Consensus 112 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~ 191 (389)
|.||||.|+..|+.++++.|++.. +.+++..|..|.||||+ +..|+.+++++|+++|++++.+|.. |.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~ 78 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRE-LVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTS-GTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTT-CCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhh-CcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCC-CCCHHHHHHHc
Confidence 468999999999999999999983 37999999999999999 9999999999999999999999999 99999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHHHH
Q 016433 192 VKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEILE 264 (389)
Q Consensus 192 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a~ 264 (389)
|+.+++++|+++|++++.+|..|+||||+|+ ..|+.+++++|++. ++ +.++.++|+
T Consensus 79 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~----------------~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~ 141 (156)
T 1bd8_A 79 GFLDTLKVLVEHGADVNVPDGTGALPIHLAV----------------QEGHTAVVSFLAAE-SDLHRRDARGLTPLELAL 141 (156)
T ss_dssp TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHH----------------HHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHH
T ss_pred CcHHHHHHHHHcCCCCCCcCCCCCcHHHHHH----------------HhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHH
Confidence 9999999999999999999988888876654 46777777777765 42 446777777
Q ss_pred HcCChhHHHHHHh
Q 016433 265 KRGKGDQLEYLVK 277 (389)
Q Consensus 265 ~~g~~~~~~~L~~ 277 (389)
..|+.+++++|++
T Consensus 142 ~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 142 QRGAQDLVDILQG 154 (156)
T ss_dssp HSCCHHHHHHHHT
T ss_pred HcCcHHHHHHHHh
Confidence 7777777777764
No 69
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=1.3e-27 Score=200.85 Aligned_cols=151 Identities=26% Similarity=0.326 Sum_probs=135.6
Q ss_pred ccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHH
Q 016433 109 VAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMA 188 (389)
Q Consensus 109 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A 188 (389)
+.+|.||||.|+..|+.++++.|++.+ +.+++..+..|.||||+|+..|+.+++++|+++|++++.+|.. |+||||+|
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A 82 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQ-SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKG-GLVPLHNA 82 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTT-TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcC-CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCC-CCCHHHHH
Confidence 457889999999999999999999965 2788899999999999999999999999999999999999999 99999999
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHH
Q 016433 189 AGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQE 261 (389)
Q Consensus 189 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~ 261 (389)
+..|+.+++++|+++|++++.+|..|+||||+ |+..|+.+++++|+++|++ +.++.+
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~----------------A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 146 (165)
T 3twr_A 83 CSYGHYEVAELLVKHGAVVNVADLWKFTPLHE----------------AAAKGKYEICKLLLQHGADPTKKNRDGNTPLD 146 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH----------------HHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGG
T ss_pred HHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHH----------------HHHcCCHHHHHHHHHcCCCCcccCCCCCChhH
Confidence 99999999999999999999999988887665 5568999999999999985 446677
Q ss_pred HHHHcCChhHHHHHHhc
Q 016433 262 ILEKRGKGDQLEYLVKW 278 (389)
Q Consensus 262 ~a~~~g~~~~~~~L~~~ 278 (389)
+|.. |+.+++++|++.
T Consensus 147 ~a~~-~~~~i~~~L~~~ 162 (165)
T 3twr_A 147 LVKD-GDTDIQDLLRGD 162 (165)
T ss_dssp GSCT-TCHHHHHHHHTC
T ss_pred hHhc-CChHHHHHHhhc
Confidence 7555 899999999853
No 70
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.95 E-value=1.8e-26 Score=204.98 Aligned_cols=169 Identities=18% Similarity=0.120 Sum_probs=146.4
Q ss_pred cccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHH
Q 016433 108 VVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHM 187 (389)
Q Consensus 108 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~ 187 (389)
.+..|.|+||.|+..|+.+++++|++.| ++++.++..|.||||+|+..|+.+++++|++.|++++..+...|.||||+
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~ 82 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEAG--YDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHW 82 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHH
T ss_pred cccccchHHHHHHHcCChHHHHHHHHcC--CCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHH
Confidence 4667899999999999999999999999 99999999999999999999999999999999999986665449999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHH---------h--------ccCCCCCHHHHHHHhCc-HHHHHHH
Q 016433 188 AAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEI---------L--------RVTPKGNPMQFARRLGL-EAVIRNL 249 (389)
Q Consensus 188 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~---------~--------~~~~g~t~l~~A~~~g~-~~~v~~L 249 (389)
|+..|+.+++++|+++|++++..|..|.||||+|+.. + .+..|.||||+|+..++ .+++++|
T Consensus 83 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L 162 (240)
T 3eu9_A 83 ATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLL 162 (240)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHH
Confidence 9999999999999999999999999999999998761 1 12457788888886665 7888888
Q ss_pred HHcccC--------hHHHHHHHHHcCChhHHHHHHhc
Q 016433 250 EEAVFE--------YAEVQEILEKRGKGDQLEYLVKW 278 (389)
Q Consensus 250 l~~g~~--------~~~~~~~a~~~g~~~~~~~L~~~ 278 (389)
++.|++ +.++.++|+..|+.+++++|++.
T Consensus 163 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 199 (240)
T 3eu9_A 163 LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEA 199 (240)
T ss_dssp HHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 887764 23677888888888888888753
No 71
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=2.5e-27 Score=201.99 Aligned_cols=150 Identities=19% Similarity=0.182 Sum_probs=124.5
Q ss_pred CCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHc
Q 016433 78 LEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGL 157 (389)
Q Consensus 78 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~ 157 (389)
.+..++++++++.+. ......+..|.||||+||..|+.+++++|++.| ++++.+|..|.||||+|+..
T Consensus 15 ~g~~~~v~~ll~~~~----------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 15 EGNAVAVRLWLDNTE----------NDLNQGDDHGFSPLHWACREGRSAVVEMLIMRG--ARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp HTCHHHHHHHHHCTT----------SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHT
T ss_pred cCCHHHHHHHHhcCc----------ccccccCCCCCCHHHHHHHcCcHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHc
Confidence 334777888887532 123345567889999999999999999999888 88888888899999999999
Q ss_pred CCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHH
Q 016433 158 GSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFA 237 (389)
Q Consensus 158 g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A 237 (389)
|+.+++++|+++|++++.+|.. |.||||+|+..|+.+++++|+++|++++.+|..|.|||++ |
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~----------------A 145 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEH-GNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDK----------------A 145 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGG----------------S
T ss_pred CCHHHHHHHHHcCCCCCccCCC-CCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHH----------------H
Confidence 9999999999999999888888 8899999999999999999999899888888888777655 5
Q ss_pred HHhCcHHHHHHHHHcccCh
Q 016433 238 RRLGLEAVIRNLEEAVFEY 256 (389)
Q Consensus 238 ~~~g~~~~v~~Ll~~g~~~ 256 (389)
+..++.+++++|++.|++.
T Consensus 146 ~~~~~~~~~~~L~~~g~~~ 164 (179)
T 3f6q_A 146 KAPLRELLRERAEKMGQNL 164 (179)
T ss_dssp CHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHhhcCc
Confidence 5589999999999999874
No 72
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=4.1e-27 Score=214.96 Aligned_cols=155 Identities=19% Similarity=0.214 Sum_probs=137.9
Q ss_pred ccccccCCChHHHHHHHcCCHHHHHHHHHhCCCC-CccccCCCCCcHHHHHH-----HcCCHHHHHHHHhcCCCcccccC
Q 016433 105 AKDVVAEYESPWWTAAKKADDAALKEIIEAGDGR-DVDAVDNDGRTALLFVS-----GLGSEACVRVLAEAGTDLNHRDS 178 (389)
Q Consensus 105 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~d~~g~t~Lh~A~-----~~g~~~~v~~Ll~~ga~~~~~d~ 178 (389)
.+..+.+|.||||+||..|+.+++++|++.| + +++..|..|.||||+|+ ..++.+++++|++.|.+++..+.
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g--~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~ 181 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSG--VCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQ 181 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTS--CCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTT
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCC--CCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCC
Confidence 3445778999999999999999999999999 6 99999999999999999 67899999999999999999999
Q ss_pred CCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHH-cccC--
Q 016433 179 GGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEE-AVFE-- 255 (389)
Q Consensus 179 ~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~-~g~~-- 255 (389)
. |+||||+|+..|+.++|++|+++|++++.+|..|+||||+| +..|+.++|++|++ .|++
T Consensus 182 ~-g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A----------------~~~g~~~iv~~Ll~~~gad~~ 244 (276)
T 4hbd_A 182 A-GQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCA----------------CEHGHKEIAGLLLAVPSCDIS 244 (276)
T ss_dssp T-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH----------------HHHTCHHHHHHHHTSTTCCTT
T ss_pred C-CCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHH----------------HHCCCHHHHHHHHhcCCCCCc
Confidence 9 99999999999999999999999999999999998887665 45788888888888 6664
Q ss_pred -----hHHHHHHHHHcCChhHHHHHHhc
Q 016433 256 -----YAEVQEILEKRGKGDQLEYLVKW 278 (389)
Q Consensus 256 -----~~~~~~~a~~~g~~~~~~~L~~~ 278 (389)
+.++.++|+..|+.+++++|++.
T Consensus 245 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 245 LTDRDGSTALMVALDAGQSEIASMLYSR 272 (276)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 45778888888888888888764
No 73
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=2e-27 Score=214.64 Aligned_cols=167 Identities=16% Similarity=0.161 Sum_probs=144.1
Q ss_pred ccCCChHHHHHHHcCCHHHHHHHHH----hCCCCCccccC----CCCCcHHHHHH---HcCCHHHHHHHHhcCCC-----
Q 016433 109 VAEYESPWWTAAKKADDAALKEIIE----AGDGRDVDAVD----NDGRTALLFVS---GLGSEACVRVLAEAGTD----- 172 (389)
Q Consensus 109 ~~~g~t~L~~A~~~g~~~~v~~Ll~----~g~~~~~~~~d----~~g~t~Lh~A~---~~g~~~~v~~Ll~~ga~----- 172 (389)
+..|+|+||.||..|+.++++.|++ .+ ++++..+ ..|+||||+|+ ..|+.++|++|++.|++
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~--~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~ 79 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHK--KRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMR 79 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHT--CCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcC--CCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchH
Confidence 3467899999999999996555554 88 8888776 77999999999 67999999999998754
Q ss_pred ------cccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCC--------------CCCCcHHHHHHH---------
Q 016433 173 ------LNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVED--------------DRGLTPLALAKE--------- 223 (389)
Q Consensus 173 ------~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d--------------~~g~tpL~~A~~--------- 223 (389)
++..|.. |+||||+|+..|+.++|++|+++|++++..| ..|+||||+|+.
T Consensus 80 ~~~~~~~~~~d~~-g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~ 158 (260)
T 3jxi_A 80 EFINSPFRDVYYR-GQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHY 158 (260)
T ss_dssp HHHTCCBCCSSEE-SBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHH
T ss_pred hhhcccccccccC-CCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 4455557 9999999999999999999999999999998 689999999986
Q ss_pred Hhc-----------cCCCCCHHHHHHHhCc---------HHHHHHHHHcccC--------------hHHHHHHHHHcCCh
Q 016433 224 ILR-----------VTPKGNPMQFARRLGL---------EAVIRNLEEAVFE--------------YAEVQEILEKRGKG 269 (389)
Q Consensus 224 ~~~-----------~~~g~t~l~~A~~~g~---------~~~v~~Ll~~g~~--------------~~~~~~~a~~~g~~ 269 (389)
++. +..|.||||+|+..|+ .+++++|++.|++ +.++.++|+..|+.
T Consensus 159 Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~ 238 (260)
T 3jxi_A 159 LTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKI 238 (260)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCH
Confidence 344 2368899999999888 7999999999874 35789999999999
Q ss_pred hHHHHHHhc
Q 016433 270 DQLEYLVKW 278 (389)
Q Consensus 270 ~~~~~L~~~ 278 (389)
+++++|++.
T Consensus 239 ~~v~~Ll~~ 247 (260)
T 3jxi_A 239 GIFQHIIRR 247 (260)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999964
No 74
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=3.8e-27 Score=200.81 Aligned_cols=153 Identities=21% Similarity=0.239 Sum_probs=137.9
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHh
Q 016433 111 EYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAG 190 (389)
Q Consensus 111 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~ 190 (389)
++.++||.||..|+.++++.|++.+ +.+++.+|..|+||||+||..|+.+++++|+++|++++.+|.. |+||||+|+.
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~ 81 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNT-ENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRG-DDTPLHLAAS 81 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCT-TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcC-cccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHH
Confidence 5789999999999999999999985 2889999999999999999999999999999999999999999 9999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHHH
Q 016433 191 YVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEIL 263 (389)
Q Consensus 191 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a 263 (389)
.|+.+++++|+++|++++.+|..|.||||+ |+..|+.+++++|++.|++ +.++.++|
T Consensus 82 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~----------------A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A 145 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKADINAVNEHGNVPLHY----------------ACFWGQDQVAEDLVANGALVSICNKYGEMPVDKA 145 (179)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHH----------------HHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGS
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHH----------------HHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHH
Confidence 999999999999999999999988887666 5568999999999999985 45778888
Q ss_pred HHcCChhHHHHHHhccCC
Q 016433 264 EKRGKGDQLEYLVKWRDG 281 (389)
Q Consensus 264 ~~~g~~~~~~~L~~~~~~ 281 (389)
...++.+++++|++....
T Consensus 146 ~~~~~~~~~~~L~~~g~~ 163 (179)
T 3f6q_A 146 KAPLRELLRERAEKMGQN 163 (179)
T ss_dssp CHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHhhcC
Confidence 899999999999976443
No 75
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=2.7e-27 Score=197.18 Aligned_cols=131 Identities=27% Similarity=0.297 Sum_probs=117.9
Q ss_pred cccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCcc-HHH
Q 016433 108 VVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLT-ALH 186 (389)
Q Consensus 108 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~t-pLh 186 (389)
.+..|.||||+||..|+.+++++|+++| ++++.+|..|+||||+|+ .|+.+++++|+++|++++.+|.. |+| |||
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~-g~ttpL~ 83 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAG--ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPA-TLTRPVH 83 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTT--CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTT-TCCCHHH
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCC-CCcHHHH
Confidence 4567899999999999999999999998 999999999999999986 99999999999999999999999 999 999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccChHH
Q 016433 187 MAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFEYAE 258 (389)
Q Consensus 187 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~ 258 (389)
+|+..|+.+++++|+++|++++.+|..|+||||+ |+..|+.+++++|+++|++...
T Consensus 84 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~----------------A~~~~~~~~v~~Ll~~ga~~~~ 139 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDL----------------AEELGHRDVARYLRAAAGGTRG 139 (156)
T ss_dssp HHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHH----------------HHHHTCHHHHHHHSSCC-----
T ss_pred HHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHH----------------HHHhCHHHHHHHHHHcCCCCCc
Confidence 9999999999999999999999999988888666 5568999999999999987543
No 76
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=5.5e-27 Score=195.01 Aligned_cols=151 Identities=21% Similarity=0.234 Sum_probs=131.3
Q ss_pred HHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCc
Q 016433 70 SKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRT 149 (389)
Q Consensus 70 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t 149 (389)
..+.++... ..++++++++.. . ......+..|.||||+ |..|+.+++++|++.| ++++.+|..|.|
T Consensus 5 ~L~~A~~~g-~~~~v~~ll~~~-~---------~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t 70 (156)
T 1bd8_A 5 RLSGAAARG-DVQEVRRLLHRE-L---------VHPDALNRFGKTALQV-MMFGSTAIALELLKQG--ASPNVQDTSGTS 70 (156)
T ss_dssp HHHHHHHHT-CHHHHHHHHHTT-C---------CCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTT--CCTTCCCTTSCC
T ss_pred HHHHHHHhC-CHHHHHHHHHhh-C---------cCccccCCCCCcHHHH-HHcCCHHHHHHHHHCC--CCCCCcCCCCCC
Confidence 334444444 488888888762 1 1333456789999999 9999999999999999 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCC
Q 016433 150 ALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTP 229 (389)
Q Consensus 150 ~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~ 229 (389)
|||+|+..|+.+++++|+++|++++.+|.. |+||||+|+..|+.+++++|++. ++++.+|..|.||||+
T Consensus 71 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~--------- 139 (156)
T 1bd8_A 71 PVHDAARTGFLDTLKVLVEHGADVNVPDGT-GALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLEL--------- 139 (156)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCSCCCCTT-SCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHH---------
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCCcCCC-CCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHH---------
Confidence 999999999999999999999999999999 99999999999999999999999 9999999988887665
Q ss_pred CCCHHHHHHHhCcHHHHHHHHHc
Q 016433 230 KGNPMQFARRLGLEAVIRNLEEA 252 (389)
Q Consensus 230 g~t~l~~A~~~g~~~~v~~Ll~~ 252 (389)
|+..|+.+++++|+++
T Consensus 140 -------A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 140 -------ALQRGAQDLVDILQGH 155 (156)
T ss_dssp -------HHHSCCHHHHHHHHTT
T ss_pred -------HHHcCcHHHHHHHHhh
Confidence 5569999999999874
No 77
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.94 E-value=9.4e-27 Score=207.22 Aligned_cols=158 Identities=21% Similarity=0.251 Sum_probs=133.1
Q ss_pred CChHHHHHHHcCCCCCCcccc-CcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCC------ccccCCCCCcHHH
Q 016433 80 DATGMEYLIEWKDGHAPSWVP-QDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRD------VDAVDNDGRTALL 152 (389)
Q Consensus 80 ~~~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~------~~~~d~~g~t~Lh 152 (389)
+.+++++++..++.....++. .+......+..|.||||+|+..|+.+++++|++.+ ++ ++..+..|.||||
T Consensus 45 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~--~~~~~~~~~~~~~~~g~t~L~ 122 (236)
T 1ikn_D 45 QQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSC--TTPHLHSILKATNYNGHTCLH 122 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHST--TTTSSSCGGGCCCTTCCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcc--cchhHHHHhhccCCCCCCHHH
Confidence 455555555554433333222 22344556778999999999999999999999998 54 6788899999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCcccccC-CCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCC
Q 016433 153 FVSGLGSEACVRVLAEAGTDLNHRDS-GGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKG 231 (389)
Q Consensus 153 ~A~~~g~~~~v~~Ll~~ga~~~~~d~-~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~ 231 (389)
+|+..|+.+++++|+++|++++.++. . |.||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 123 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~-g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~----------- 190 (236)
T 1ikn_D 123 LASIHGYLGIVELLVSLGADVNAQEPCN-GRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQL----------- 190 (236)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTT-CCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGG-----------
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHH-----------
Confidence 99999999999999999999999998 7 9999999999999999999999999999999998888666
Q ss_pred CHHHHHHHhCcHHHHHHHHHcccCh
Q 016433 232 NPMQFARRLGLEAVIRNLEEAVFEY 256 (389)
Q Consensus 232 t~l~~A~~~g~~~~v~~Ll~~g~~~ 256 (389)
|+..|+.+++++|+++|++.
T Consensus 191 -----A~~~~~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 191 -----TWGRPSTRIQQQLGQLTLEN 210 (236)
T ss_dssp -----CTTSSCHHHHHHHHTTSCGG
T ss_pred -----HHccCchHHHHHHHHcchhh
Confidence 55589999999999999864
No 78
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=5.8e-27 Score=209.33 Aligned_cols=157 Identities=21% Similarity=0.133 Sum_probs=118.7
Q ss_pred HHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCc
Q 016433 70 SKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRT 149 (389)
Q Consensus 70 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t 149 (389)
..+.+++. +..+.++.+++.+. ....+..|.||||.|+..|+.++++.|++.| +++|.+|..|+|
T Consensus 8 ~L~~a~~~-~~~~~~~~ll~~g~------------~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~d~~g~t 72 (239)
T 1ycs_B 8 SLPPGKRT-NLRKTGSERIAHGM------------RVKFNPLPLALLLDSSLEGEFDLVQRIIYEV--DDPSLPNDEGIT 72 (239)
T ss_dssp ------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTT--SSCCCCCTTSCC
T ss_pred cCchhhhh-hhHHHHHHHhccCC------------CcccCchhhHHHHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCCC
Confidence 33333333 33566666665542 2223467899999999999999999999999 899999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCC-cHHHHHHHHhccC
Q 016433 150 ALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGL-TPLALAKEILRVT 228 (389)
Q Consensus 150 ~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~-tpL~~A~~~~~~~ 228 (389)
|||+||..|+.++|++|+++|+++|.+|.. |+||||+|+..|+.+++++|+++|++++..+..|. ||||+|.
T Consensus 73 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~-g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~------ 145 (239)
T 1ycs_B 73 ALHNAVCAGHTEIVKFLVQFGVNVNAADSD-GWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCE------ 145 (239)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCTTCCCTT-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCC------
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHH------
Confidence 999999999999999999999999999999 99999999999999999999999999999988776 7776651
Q ss_pred CCCCHHHHHHHhCcHHHHHHHHHcccCh
Q 016433 229 PKGNPMQFARRLGLEAVIRNLEEAVFEY 256 (389)
Q Consensus 229 ~g~t~l~~A~~~g~~~~v~~Ll~~g~~~ 256 (389)
++..|+.+|+++|++.|++.
T Consensus 146 --------~~~~g~~~~~~~Ll~~~a~~ 165 (239)
T 1ycs_B 146 --------EMEEGYTQCSQFLYGVQEKM 165 (239)
T ss_dssp --------SSSTTCCCHHHHHHHHHHHT
T ss_pred --------HhhhccHHHHHHHHHhhhcc
Confidence 15679999999999998754
No 79
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.93 E-value=2.6e-26 Score=209.63 Aligned_cols=162 Identities=21% Similarity=0.225 Sum_probs=138.6
Q ss_pred HhccCCCCChHHHHHHHcCCCCCCccccC-cc-cccccccCCChHHHHHH-----HcCCHHHHHHHHHhCCCCCccccCC
Q 016433 73 IGSRALEDATGMEYLIEWKDGHAPSWVPQ-DY-IAKDVVAEYESPWWTAA-----KKADDAALKEIIEAGDGRDVDAVDN 145 (389)
Q Consensus 73 ~~~~~~~~~~~l~~l~~~~~~~~~~~~~~-~~-~~~~~~~~g~t~L~~A~-----~~g~~~~v~~Ll~~g~~~~~~~~d~ 145 (389)
++..+..|.+++++++..++.....++.. +. .....+..|.||||+|+ ..++.++++.|++.| .+++..|.
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g--~~~~~~~~ 181 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLG--NINAKASQ 181 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHS--CTTCCCTT
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcC--CCccccCC
Confidence 45556667777777777665444443322 22 44556789999999999 778999999999999 89999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHH-cCCCCCCCCCCCCcHHHHHHHH
Q 016433 146 DGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLE-LGADADVEDDRGLTPLALAKEI 224 (389)
Q Consensus 146 ~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tpL~~A~~~ 224 (389)
.|+||||+|+..|+.++|++|+++|+++|.+|.. |+||||+|+..|+.+++++|++ .|++++.+|..|+||||+
T Consensus 182 ~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~-G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~---- 256 (276)
T 4hbd_A 182 AGQTALMLAVSHGRVDVVKALLACEADVNVQDDD-GSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMV---- 256 (276)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHH----
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC-CCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHH----
Confidence 9999999999999999999999999999999999 9999999999999999999999 899999999999888666
Q ss_pred hccCCCCCHHHHHHHhCcHHHHHHHHHcc
Q 016433 225 LRVTPKGNPMQFARRLGLEAVIRNLEEAV 253 (389)
Q Consensus 225 ~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g 253 (389)
|+..|+.+++++|++++
T Consensus 257 ------------A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 257 ------------ALDAGQSEIASMLYSRM 273 (276)
T ss_dssp ------------HHHHTCHHHHHHHHHHC
T ss_pred ------------HHHcCCHHHHHHHHhcc
Confidence 55589999999999875
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=1.3e-26 Score=207.05 Aligned_cols=150 Identities=20% Similarity=0.133 Sum_probs=107.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHh
Q 016433 111 EYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAG 190 (389)
Q Consensus 111 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~ 190 (389)
.|.||||.|+..|+.++++.|+++| ++++.. ..|.||||+|+..|+.++|++|++.|+++|.+|.. |+||||+||.
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g--~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~-g~t~L~~A~~ 79 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHG--MRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDE-GITALHNAVC 79 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTT-SCCHHHHHHH
T ss_pred cccccCchhhhhhhHHHHHHHhccC--CCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHH
Confidence 5899999999999999999999999 888854 78999999999999999999999999999999999 9999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccCh--------HHHHHH
Q 016433 191 YVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFEY--------AEVQEI 262 (389)
Q Consensus 191 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~--------~~~~~~ 262 (389)
.|+.+++++|+++|++++.+|..|+||||+ |+..|+.++|++|+++|++. .++.++
T Consensus 80 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~----------------A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~ 143 (239)
T 1ycs_B 80 AGHTEIVKFLVQFGVNVNAADSDGWTPLHC----------------AASCNNVQVCKFLVESGAAVFAMTYSDMQTAADK 143 (239)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCTTCCCHHHH----------------HHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHH
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHH----------------HHHcCCHHHHHHHHHcCCCcceecCCCCcchHHH
Confidence 999999999999999999999998888666 55689999999999999863 278888
Q ss_pred H--HHcCChhHHHHHHhccC
Q 016433 263 L--EKRGKGDQLEYLVKWRD 280 (389)
Q Consensus 263 a--~~~g~~~~~~~L~~~~~ 280 (389)
| ...|+.+++++|++...
T Consensus 144 a~~~~~g~~~~~~~Ll~~~a 163 (239)
T 1ycs_B 144 CEEMEEGYTQCSQFLYGVQE 163 (239)
T ss_dssp CCSSSTTCCCHHHHHHHHHH
T ss_pred HHHhhhccHHHHHHHHHhhh
Confidence 8 77899999999997543
No 81
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=1.1e-26 Score=188.93 Aligned_cols=128 Identities=22% Similarity=0.222 Sum_probs=115.4
Q ss_pred cccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHH
Q 016433 108 VVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHM 187 (389)
Q Consensus 108 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~ 187 (389)
.+.+|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.. |.||||+
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~ 82 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNG--SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQ-NDSPLHD 82 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTT--CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGG-GCCHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCC-CCCHHHH
Confidence 4678999999999999999999999999 999999999999999999999999999999999999999999 9999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHccc
Q 016433 188 AAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVF 254 (389)
Q Consensus 188 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~ 254 (389)
|+..|+.+++++|+++|++++.+|..|.||||+| +..++.+++++|.+.+.
T Consensus 83 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A----------------~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYT----------------DDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGC----------------CCHHHHHHHSCC-----
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH----------------hhccHHHHHhhcccccc
Confidence 9999999999999999999999999998887765 44677888877766543
No 82
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=4.6e-26 Score=202.20 Aligned_cols=132 Identities=21% Similarity=0.184 Sum_probs=121.4
Q ss_pred cccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHH
Q 016433 108 VVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHM 187 (389)
Q Consensus 108 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~ 187 (389)
.+.+|.||||+||..|+.+++++|++.| +++|.+|..|+||||+||..|+.++|++|+++|+++|.+|.. |+||||+
T Consensus 17 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~-g~tpLh~ 93 (229)
T 2vge_A 17 ARLNPLVLLLDAALTGELEVVQQAVKEM--NDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSH-GWTPLHC 93 (229)
T ss_dssp TTSCHHHHHHHHHHHTCHHHHHHHHHHS--SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCCHHHH
T ss_pred cccchhHHHHHHHHcCCHHHHHHHHhcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCCHHHH
Confidence 3457889999999999999999999999 999999999999999999999999999999999999999999 9999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccCh
Q 016433 188 AAGYVKPGVAKLLLELGADADVED-DRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFEY 256 (389)
Q Consensus 188 A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~ 256 (389)
|+..|+.+++++|+++|++++..+ ..|+||||+|+ |+..|+.+++++|++.|++.
T Consensus 94 A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~--------------a~~~~~~~~v~~Ll~~ga~~ 149 (229)
T 2vge_A 94 AASCNDTVICMALVQHGAAIFATTLSDGATAFEKCD--------------PYREGYADCATYLADVEQSM 149 (229)
T ss_dssp HHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCC--------------TTSTTHHHHHHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHH--------------HHhcChHHHHHHHHHcCCCc
Confidence 999999999999999999999986 58888766651 16689999999999998754
No 83
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=2.6e-26 Score=197.06 Aligned_cols=126 Identities=17% Similarity=0.239 Sum_probs=112.9
Q ss_pred cCCChHHHHHHHcCCH----HHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCC------HHHHHHHHhcCCCcccccCC
Q 016433 110 AEYESPWWTAAKKADD----AALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGS------EACVRVLAEAGTDLNHRDSG 179 (389)
Q Consensus 110 ~~g~t~L~~A~~~g~~----~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~------~~~v~~Ll~~ga~~~~~d~~ 179 (389)
..|+||||+|+..|+. +++++||++| +++|.+|..|+||||+|+..++ .+++++|+++|+++|.+|..
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~G--advn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~ 113 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKG--ADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKP 113 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTT--CCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGG
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCC--CCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCC
Confidence 5799999999999985 5899999999 9999999999999999999987 68899999999999999999
Q ss_pred CCc-cHHHHHHhcCC-----HHHHHHHHH-cCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHc
Q 016433 180 GGL-TALHMAAGYVK-----PGVAKLLLE-LGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEA 252 (389)
Q Consensus 180 ~g~-tpLh~A~~~g~-----~~~v~~Ll~-~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~ 252 (389)
|+ ||||+|+..+. .+++++|++ +|++++.+|..|.||||+ |++.|+.++|++|+++
T Consensus 114 -g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~----------------A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 114 -YKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEF----------------VKRCQKPIALKMMEDY 176 (186)
T ss_dssp -GTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHH----------------HHTTTCHHHHHHHHHH
T ss_pred -cCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHH----------------HHHcCCHHHHHHHHHH
Confidence 99 99999999553 569999999 999999999999888666 5558999999999876
Q ss_pred cc
Q 016433 253 VF 254 (389)
Q Consensus 253 g~ 254 (389)
..
T Consensus 177 ~~ 178 (186)
T 3t8k_A 177 IK 178 (186)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 84
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=3.3e-28 Score=216.04 Aligned_cols=169 Identities=15% Similarity=0.084 Sum_probs=145.2
Q ss_pred hHHHHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCC
Q 016433 66 YGEVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDN 145 (389)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~ 145 (389)
.+.+..+.++... ..+++++|++.+. ..+..+..|.||||+||..|+.+++++|++.| +++|.+|.
T Consensus 20 ~~~t~L~~A~~~g-~~~~v~~Ll~~g~-----------~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g--a~~n~~d~ 85 (229)
T 2vge_A 20 NPLVLLLDAALTG-ELEVVQQAVKEMN-----------DPSQPNEEGITALHNAICGANYSIVDFLITAG--ANVNSPDS 85 (229)
T ss_dssp CHHHHHHHHHHHT-CHHHHHHHHHHSS-----------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCT
T ss_pred chhHHHHHHHHcC-CHHHHHHHHhcCC-----------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCCCC
Confidence 3445555555554 5999999998752 23345678999999999999999999999999 99999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccC-CCCccHHHHH--HhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 016433 146 DGRTALLFVSGLGSEACVRVLAEAGTDLNHRDS-GGGLTALHMA--AGYVKPGVAKLLLELGADADVEDDRGLTPLALAK 222 (389)
Q Consensus 146 ~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~-~~g~tpLh~A--~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~ 222 (389)
.|+||||+|+..|+.+++++|+++|++++..+. . |+||||+| +..|+.+++++|+++|++++..|..|.||++.++
T Consensus 86 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~-g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~ 164 (229)
T 2vge_A 86 HGWTPLHCAASCNDTVICMALVQHGAAIFATTLSD-GATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYS 164 (229)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSST-TCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCC-CCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHh
Confidence 999999999999999999999999999999974 7 99999999 9999999999999999999999999999998543
Q ss_pred H----------------HhccCCCCCHHHHHHHhCcHHHHHHH
Q 016433 223 E----------------ILRVTPKGNPMQFARRLGLEAVIRNL 249 (389)
Q Consensus 223 ~----------------~~~~~~g~t~l~~A~~~g~~~~v~~L 249 (389)
. ...+..|.||||+|+..|+.++|+.+
T Consensus 165 ~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~ 207 (229)
T 2vge_A 165 AEFGDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRN 207 (229)
T ss_dssp CSSTTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGG
T ss_pred hccccccCccccccccccccCCCcccHHHHHHHcCCcceeehh
Confidence 2 12245688999999999999988753
No 85
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=3.4e-25 Score=176.74 Aligned_cols=110 Identities=27% Similarity=0.340 Sum_probs=104.7
Q ss_pred ccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHH
Q 016433 109 VAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMA 188 (389)
Q Consensus 109 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A 188 (389)
+..|.||||+|+..|+.++++.|++.| ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.. |+||||+|
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~-g~tpL~~A 80 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKG--EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKH-HITPLLSA 80 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTT--CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTT-SCCHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcC--CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC-CCCHHHHH
Confidence 356889999999999999999999999 999999999999999999999999999999999999999999 99999999
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 016433 189 AGYVKPGVAKLLLELGADADVEDDRGLTPLALA 221 (389)
Q Consensus 189 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A 221 (389)
+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus 81 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 81 VYEGHVSCVKLLLSKGADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHh
Confidence 999999999999999999999999999998886
No 86
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=1.5e-25 Score=197.65 Aligned_cols=130 Identities=24% Similarity=0.301 Sum_probs=114.6
Q ss_pred cccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCcccccCCCCccHHH
Q 016433 108 VVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEA-GTDLNHRDSGGGLTALH 186 (389)
Q Consensus 108 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~~g~tpLh 186 (389)
.+.+|.||||+||..|+.++++.|++.| ++++.+|..|+||||+||..|+.++|++|++. |++++.+|.. |+||||
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~-g~tpL~ 145 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNR--VGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKL-GDTALH 145 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTT-SCCHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCC--CCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCC-CCCHHH
Confidence 3567899999999999999999999999 99999999999999999999999999999999 9999999999 999999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccCh
Q 016433 187 MAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFEY 256 (389)
Q Consensus 187 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~ 256 (389)
+|+..|+.+++++|+++|++++.+|..|.||||+| +..|+.++++.|++.|+..
T Consensus 146 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A----------------~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 146 AAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMA----------------TNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp HHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHC----------------CSHHHHHHHC---------
T ss_pred HHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHh----------------cchhHHHHHHHHhccchhh
Confidence 99999999999999999999999999998886665 4589999999999988754
No 87
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.92 E-value=1.1e-24 Score=182.02 Aligned_cols=153 Identities=18% Similarity=0.147 Sum_probs=132.6
Q ss_pred HHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcH
Q 016433 71 KIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTA 150 (389)
Q Consensus 71 ~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~ 150 (389)
.+.++... ..+++++|++.+ ......+..|.||||+|+. |+.+++++|++.| ++++.+|..|.||
T Consensus 9 L~~A~~~g-~~~~v~~Ll~~~-----------~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g--~~~~~~~~~g~t~ 73 (162)
T 1ihb_A 9 LASAAARG-DLEQLTSLLQNN-----------VNVNAQNGFGRTALQVMKL-GNPEIARRLLLRG--ANPDLKDRTGFAV 73 (162)
T ss_dssp HHHHHHHT-CHHHHHHHTTSC-----------CCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTT--CCTTCCCTTSCCH
T ss_pred HHHHHHcC-CHHHHHHHHhCC-----------CCccccCccCccHHHHHHc-CcHHHHHHHHHcC--CCCCCCCCCCCCH
Confidence 34444443 488888888653 2334456789999999999 9999999999999 9999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCC-CCCCCCCCCcHHHHHHHHhccCC
Q 016433 151 LLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGAD-ADVEDDRGLTPLALAKEILRVTP 229 (389)
Q Consensus 151 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~ 229 (389)
||+|+..|+.+++++|+++|++++.+|.. |+||||+|+..|+.+++++|+++|++ ++..|..|.||||+
T Consensus 74 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~--------- 143 (162)
T 1ihb_A 74 IHDAARAGFLDTLQTLLEFQADVNIEDNE-GNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDL--------- 143 (162)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHH---------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHH---------
Confidence 99999999999999999999999999999 99999999999999999999999998 58888888777655
Q ss_pred CCCHHHHHHHhCcHHHHHHHHHcccC
Q 016433 230 KGNPMQFARRLGLEAVIRNLEEAVFE 255 (389)
Q Consensus 230 g~t~l~~A~~~g~~~~v~~Ll~~g~~ 255 (389)
|+..|+.+++++|+++|++
T Consensus 144 -------A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 144 -------ARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp -------HHHTTCHHHHHHHHHTC--
T ss_pred -------HHHcCCHHHHHHHHHhCCC
Confidence 5669999999999999985
No 88
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=3.9e-25 Score=189.68 Aligned_cols=151 Identities=15% Similarity=0.055 Sum_probs=130.8
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCCCCccccC-CCCCcHHHHHHHcCCH----HHHHHHHhcCCCcccccCCCCccHHH
Q 016433 112 YESPWWTAAKKADDAALKEIIEAGDGRDVDAVD-NDGRTALLFVSGLGSE----ACVRVLAEAGTDLNHRDSGGGLTALH 186 (389)
Q Consensus 112 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d-~~g~t~Lh~A~~~g~~----~~v~~Ll~~ga~~~~~d~~~g~tpLh 186 (389)
+.++|+.|++.|+.+.++.++..+ ++.++ ..|+||||+|+..|+. +++++|+++|+++|.+|.. |+||||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~----~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~-g~TpLh 80 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKG----YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKE-GTTLFF 80 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHS----SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTT-CCCTHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcC----cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCC-CCcHHH
Confidence 458899999999999999999876 45556 7799999999999975 5999999999999999999 999999
Q ss_pred HHHhcCC------HHHHHHHHHcCCCCCCCCCCCC-cHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHH-cccC---
Q 016433 187 MAAGYVK------PGVAKLLLELGADADVEDDRGL-TPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEE-AVFE--- 255 (389)
Q Consensus 187 ~A~~~g~------~~~v~~Ll~~ga~~~~~d~~g~-tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~-~g~~--- 255 (389)
+|+..++ .+++++|+++|+++|.+|..|+ ||||+|+.. +.+ ..++.+++++|++ .|++
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~-----~~~------~~~~~~iv~~Ll~~~gad~~~ 149 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNY-----FVD------ENEMIPLYKLIFSQSGLQLLI 149 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGC-----CSC------HHHHHHHHHHHHTSTTCCTTC
T ss_pred HHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHc-----CCC------hhhHHHHHHHHHHhcCCCCcc
Confidence 9999987 6889999999999999999999 888887541 000 1356789999999 8885
Q ss_pred ----hHHHHHHHHHcCChhHHHHHHhc
Q 016433 256 ----YAEVQEILEKRGKGDQLEYLVKW 278 (389)
Q Consensus 256 ----~~~~~~~a~~~g~~~~~~~L~~~ 278 (389)
+.+|.++|...|+.+++++|..+
T Consensus 150 ~d~~G~TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 150 KDKWGLTALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp CCTTSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 56899999999999999999865
No 89
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=1.1e-24 Score=195.27 Aligned_cols=201 Identities=24% Similarity=0.262 Sum_probs=148.0
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHh
Q 016433 111 EYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAG 190 (389)
Q Consensus 111 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~ 190 (389)
.+.+++++++..|+.+.+..+...+ .+ .+..|.||||+|+..|+.++|++|++ |+++|.+|.. |+||||+||.
T Consensus 14 ~~~~~~l~~~~~g~~~~~~~~~~~~--~~---~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~-g~t~L~~A~~ 86 (244)
T 3ui2_A 14 EGAMEYLIEWKDGHSPSWVPSSYIA--AD---VVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDEN-GRTALLFVAG 86 (244)
T ss_dssp TTEEEEEEEESSCCCCEEEEGGGSC--HH---HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTT-SCBHHHHHHH
T ss_pred CCccHHHHHHHcCCCcccccccccc--cc---cccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCC-CCCHHHHHHH
Confidence 4556666666666665554444433 22 34578999999999999999999999 9999999999 9999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccC--------------
Q 016433 191 YVKPGVAKLLLELGADADVED-DRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------------- 255 (389)
Q Consensus 191 ~g~~~~v~~Ll~~ga~~~~~d-~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------------- 255 (389)
.|+.++|++|+++|++++.+| ..|+||||+|+. .|+.++|++|+++|++
T Consensus 87 ~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~----------------~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~ 150 (244)
T 3ui2_A 87 LGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG----------------YVRPEVVEALVELGADIEVEDERGLTALEL 150 (244)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH----------------TTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred CCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH----------------cCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence 999999999999999999988 778888777654 4555555555555443
Q ss_pred ---------hHHHHHHHHHcCChhHHHHHHhccCCCCCcchhcccccchhhhhhhhhhHHHHHHhhhcccccCCCCeeEE
Q 016433 256 ---------YAEVQEILEKRGKGDQLEYLVKWRDGGDNEWVKVGFIAEDLVTDYEAGLEYAVAEGVLGKRMGDDGKREFL 326 (389)
Q Consensus 256 ---------~~~~~~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~v~e~il~~r~~~~g~~~~l 326 (389)
..++.++++..|+.+++++|.+..... .....++.++. ..+..+|+
T Consensus 151 A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~~------------------------~~~~~~~~~~~-~~~~~e~l 205 (244)
T 3ui2_A 151 AREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEY------------------------AEVDEIVEKRG-KGKDVEYL 205 (244)
T ss_dssp HHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEEE------------------------EEEEEEEEEES-CTTSCEEE
T ss_pred HHHHHhccCCCCHHHHHHHcChHHHHHHHHHhcccc------------------------ccHHHHHHHhc-cCcchhhh
Confidence 234555666777788888777431100 00122333333 45678999
Q ss_pred EeeccCCCCCcccCCCCChHHHHHHHHhhhhhh
Q 016433 327 VKWTDIDEATWEPEENVDPDLIKEFEDSQSDGA 359 (389)
Q Consensus 327 vkw~~~~~~tWe~~~~l~~~li~a~~~~~~~~~ 359 (389)
++|.++.+.+|.+.+++.++++++|+.+...+.
T Consensus 206 ~~~~~~~~~~w~~~~~i~~~li~~y~~~~~~~~ 238 (244)
T 3ui2_A 206 VRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAV 238 (244)
T ss_dssp EEESSSSCEEEEESTTBCHHHHHHHHHHHC---
T ss_pred hhhcCCCCCCcCcchhcCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988766543
No 90
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.91 E-value=1.5e-25 Score=212.68 Aligned_cols=166 Identities=14% Similarity=0.046 Sum_probs=133.1
Q ss_pred cCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCC---ccccCCCCCcHHH
Q 016433 76 RALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRD---VDAVDNDGRTALL 152 (389)
Q Consensus 76 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~d~~g~t~Lh 152 (389)
...+..+.++++.+.+ .+++||||+||..|+.++|++|++.| +. .+..+..|.||||
T Consensus 74 ~~~~~~~~~~~l~~~g------------------~~~~T~Lh~Aa~~G~~e~v~~Ll~~g--a~~~~~~~~~~~~~tpL~ 133 (376)
T 2aja_A 74 YNRNAKQLWSDAHKKG------------------IKSEVICFVAAITGCSSALDTLCLLL--TSDEIVKVIQAENYQAFR 133 (376)
T ss_dssp TTTTCTTHHHHHHHHT------------------CCHHHHHHHHHHHCCHHHHHHHTTC----CCSSCC--CHHHHHHHH
T ss_pred hcCCCHHHHHHHHHcC------------------CCcCCHHHHHHHcCCHHHHHHHHHcC--CcHHHHHHhccCCCCHHH
Confidence 3344567777777653 24569999999999999999999998 52 2244557889999
Q ss_pred HHHHcCCHHHHHHHHhcCCCc---ccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCC--CCCCCCcHHHHHHHHhcc
Q 016433 153 FVSGLGSEACVRVLAEAGTDL---NHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADV--EDDRGLTPLALAKEILRV 227 (389)
Q Consensus 153 ~A~~~g~~~~v~~Ll~~ga~~---~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~--~d~~g~tpL~~A~~~~~~ 227 (389)
+||..|+.++|++|+++|+++ +..+. ++||||+||..|+.++|++|+++|++++. .|..|.||||
T Consensus 134 ~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~--~~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~-------- 203 (376)
T 2aja_A 134 LAAENGHLHVLNRLCELAPTEIMAMIQAE--NYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFR-------- 203 (376)
T ss_dssp HHHHTTCHHHHHHHHHSCTTTHHHHHSHH--HHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHH--------
T ss_pred HHHHcCCHHHHHHHHhCCCCccccccCCC--CCCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHH--------
Confidence 999999999999999999863 33222 37999999999999999999999999876 6766666654
Q ss_pred CCCCCHHHHHH-HhCcHHHHHHHHHcccChHHHHHHHHHcCChhHHHHHHhcc
Q 016433 228 TPKGNPMQFAR-RLGLEAVIRNLEEAVFEYAEVQEILEKRGKGDQLEYLVKWR 279 (389)
Q Consensus 228 ~~g~t~l~~A~-~~g~~~~v~~Ll~~g~~~~~~~~~a~~~g~~~~~~~L~~~~ 279 (389)
+|+ ..|+.+||++|++.|++..++.+.|+..|+.+++++|++..
T Consensus 204 --------~Aa~~~G~~eiv~~Ll~~ga~~~taL~~Aa~~g~~evv~lL~~~g 248 (376)
T 2aja_A 204 --------WAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHV 248 (376)
T ss_dssp --------HHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHHHHHH
T ss_pred --------HHHHHCCCHHHHHHHHhCCCccchHHHHHHHCCCHHHHHHHHhcC
Confidence 566 68999999999999888888889999999999999998653
No 91
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=5.3e-24 Score=196.63 Aligned_cols=138 Identities=25% Similarity=0.256 Sum_probs=120.1
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCCCCccc------cCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCcccccCCCCc
Q 016433 112 YESPWWTAAKKADDAALKEIIEAGDGRDVDA------VDNDGRTALLFVSGL---GSEACVRVLAEAGTDLNHRDSGGGL 182 (389)
Q Consensus 112 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~------~d~~g~t~Lh~A~~~---g~~~~v~~Ll~~ga~~~~~d~~~g~ 182 (389)
..++||.|+..|+.+.++.|+..| ++++. .+..|+||||+|+.. |+.+++++|+++|+++|.+|.. |+
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g--~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~-G~ 227 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANG--QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAAD-GN 227 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTT--CCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTT-CC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcC--CcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCC-CC
Confidence 457899999999999999999999 89988 689999999999997 8999999999999999999999 99
Q ss_pred cHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccC-hHHHHH
Q 016433 183 TALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE-YAEVQE 261 (389)
Q Consensus 183 tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~ 261 (389)
||||+|+..|+.+++++|+++|++++.+|..|.||||+ |+..|+.+++++|+++|++ +.++.+
T Consensus 228 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~----------------A~~~~~~~iv~~Ll~~ga~~g~tpLh 291 (301)
T 2b0o_E 228 TALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDI----------------ARKKHHKECEELLEQAQAGTFAFPLH 291 (301)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHH----------------HHHHTCHHHHHHHHHHHHHTTSSCCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH----------------HHHcCCHHHHHHHHHhcCCCCCChhH
Confidence 99999999999999999999999999999998888666 5558999999999999875 456667
Q ss_pred HHHHcCC
Q 016433 262 ILEKRGK 268 (389)
Q Consensus 262 ~a~~~g~ 268 (389)
+|+..|+
T Consensus 292 ~A~~~g~ 298 (301)
T 2b0o_E 292 VDYSWVI 298 (301)
T ss_dssp -------
T ss_pred HHHhcCC
Confidence 7766665
No 92
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=9.3e-24 Score=171.49 Aligned_cols=124 Identities=24% Similarity=0.241 Sum_probs=115.1
Q ss_pred CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCC-CC
Q 016433 137 GRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDR-GL 215 (389)
Q Consensus 137 ~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~-g~ 215 (389)
+++++.+|..|.||||+|+..|+.+++++|+++|++++.+|.. |+||||+|+. |+.+++++|+++|++++.+|.. |+
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~ 79 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRF-GRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT 79 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCC-CCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 3789999999999999999999999999999999999999999 9999999999 9999999999999999999988 77
Q ss_pred cHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccC-------hHHHHHHHHHcCChhHHHHHHhc
Q 016433 216 TPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE-------YAEVQEILEKRGKGDQLEYLVKW 278 (389)
Q Consensus 216 tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~a~~~g~~~~~~~L~~~ 278 (389)
||||+ |+..|+.+++++|++.|++ +.++.++|...|+.+++++|++.
T Consensus 80 t~L~~----------------A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 133 (136)
T 1d9s_A 80 RPVHD----------------AAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAA 133 (136)
T ss_dssp CHHHH----------------HHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred CHHHH----------------HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 77665 5568999999999999875 56799999999999999999865
No 93
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.90 E-value=2.4e-23 Score=157.43 Aligned_cols=93 Identities=41% Similarity=0.544 Sum_probs=89.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHh
Q 016433 111 EYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAG 190 (389)
Q Consensus 111 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~ 190 (389)
+|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|.. |+||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~-g~t~l~~A~~ 77 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAG--ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAAR 77 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC-CCCHHHHHHH
Confidence 4899999999999999999999999 999999999999999999999999999999999999999999 9999999999
Q ss_pred cCCHHHHHHHHHcCCC
Q 016433 191 YVKPGVAKLLLELGAD 206 (389)
Q Consensus 191 ~g~~~~v~~Ll~~ga~ 206 (389)
.|+.+++++|+++||+
T Consensus 78 ~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 78 NGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TTCHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHcCCC
Confidence 9999999999999985
No 94
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.90 E-value=5e-23 Score=187.92 Aligned_cols=124 Identities=27% Similarity=0.262 Sum_probs=115.0
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhCCCCC------ccccCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCcccccCCCCcc
Q 016433 113 ESPWWTAAKKADDAALKEIIEAGDGRD------VDAVDNDGRTALLFVSGL---GSEACVRVLAEAGTDLNHRDSGGGLT 183 (389)
Q Consensus 113 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~------~~~~d~~g~t~Lh~A~~~---g~~~~v~~Ll~~ga~~~~~d~~~g~t 183 (389)
.++|+.|+..|+.+.++.++..| ++ ++..|..|+||||+|+.. |+.+++++|+++|+++|.+|.. |+|
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g--~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~-g~T 207 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADG--VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGK-GST 207 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTT--CCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTT-CCC
T ss_pred hhhhhhHhhhcccHHHHHHHHhh--cchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCC-CCC
Confidence 47899999999999999999999 77 445588999999999999 8999999999999999999999 999
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccC
Q 016433 184 ALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE 255 (389)
Q Consensus 184 pLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~ 255 (389)
|||+|+..|+.++|++|+++|++++.+|..|.||||+ |+..|+.++|++|+++|++
T Consensus 208 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~----------------A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI----------------AKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH----------------HHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHH----------------HHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999998888666 5569999999999999885
No 95
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.90 E-value=8.5e-24 Score=197.71 Aligned_cols=166 Identities=13% Similarity=0.070 Sum_probs=94.5
Q ss_pred ccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCcccc-----------------CCCCCcHHHHHHHcCCHHHHHHHH
Q 016433 105 AKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAV-----------------DNDGRTALLFVSGLGSEACVRVLA 167 (389)
Q Consensus 105 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-----------------d~~g~t~Lh~A~~~g~~~~v~~Ll 167 (389)
....+..|.|+++ |+.++|+.||++| ++++.. .....+.+|+|+..+..+++++|+
T Consensus 45 i~~~~~~g~~~~~-----g~~~~v~~Ll~~g--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~ 117 (327)
T 1sw6_A 45 IMKALPSPVVNDN-----EQKMKLEAFLQRL--LFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFP 117 (327)
T ss_dssp CEECBCCCCCCCH-----HHHHHHHHHHHHH--HC-------------------------------CHHHHHHHHHHHCT
T ss_pred cccCCCCCCcccC-----chhHHHHHHHHhc--cCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHH
Confidence 3444455666655 6666666666665 444330 001112235555555555566666
Q ss_pred hcCCCccc-ccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHH---------------------h
Q 016433 168 EAGTDLNH-RDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEI---------------------L 225 (389)
Q Consensus 168 ~~ga~~~~-~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~---------------------~ 225 (389)
+.|+++|. +|.. |+||||+||..|+.++|++|+++|++++.+|..|+||||+|+.. .
T Consensus 118 ~~g~dvn~~~d~~-g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~ 196 (327)
T 1sw6_A 118 NTQLNLNIPVDEH-GNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLIL 196 (327)
T ss_dssp TSCCCSCSCCSTT-CCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGE
T ss_pred hcCCCcccccCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccC
Confidence 66666666 5555 66666666666666666666666666666666666666666541 0
Q ss_pred ccCCCCCHHHHHHH----hCcHHHHHHHHHcc-----------------------------------------------c
Q 016433 226 RVTPKGNPMQFARR----LGLEAVIRNLEEAV-----------------------------------------------F 254 (389)
Q Consensus 226 ~~~~g~t~l~~A~~----~g~~~~v~~Ll~~g-----------------------------------------------~ 254 (389)
.+..|.||||+|+. .|+.+++++|++.+ .
T Consensus 197 ~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~ 276 (327)
T 1sw6_A 197 EDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANML 276 (327)
T ss_dssp ECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCC
Confidence 12345566666665 56666666665543 2
Q ss_pred -----ChHHHHHHHHHcCChhHHHHHHhc
Q 016433 255 -----EYAEVQEILEKRGKGDQLEYLVKW 278 (389)
Q Consensus 255 -----~~~~~~~~a~~~g~~~~~~~L~~~ 278 (389)
++.++.++|+..|+.+++++|++.
T Consensus 277 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ 305 (327)
T 1sw6_A 277 NAQDSNGDTCLNIAARLGNISIVDALLDY 305 (327)
T ss_dssp TCCCTTSCCHHHHHHHHCCHHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 356889999999999999999976
No 96
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=2.4e-24 Score=179.33 Aligned_cols=136 Identities=14% Similarity=0.063 Sum_probs=104.5
Q ss_pred HHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCc
Q 016433 70 SKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRT 149 (389)
Q Consensus 70 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t 149 (389)
..++++... ..+++++|++.+ ......+..|.||||+|+ .|+.+++++|++.| ++++.+|..|+|
T Consensus 15 ~L~~A~~~g-~~~~v~~Ll~~g-----------~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g--~~~~~~d~~g~t 79 (156)
T 1bi7_B 15 WLATAAARG-RVEEVRALLEAG-----------ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHG--AEPNCADPATLT 79 (156)
T ss_dssp HHHHHHHHT-CHHHHHHHHTTT-----------CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTT--CCCCCCCTTTCC
T ss_pred HHHHHHHcC-CHHHHHHHHHcC-----------CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcC--CCCCCcCCCCCc
Confidence 444444444 377778777654 233445678999999996 99999999999999 999999999999
Q ss_pred -HHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 016433 150 -ALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALA 221 (389)
Q Consensus 150 -~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A 221 (389)
|||+|+..|+.+++++|+++|++++.+|.. |+||||+|+..|+.+++++|+++|++++.+|..|.||.+-+
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~-g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 80 RPVHDAAREGFLDTLVVLHRAGARLDVRDAW-GRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCSSCCCTT-CCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCCcccCCC-CCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 999999999999999999999999999999 99999999999999999999999999999999999997644
No 97
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=5.6e-23 Score=202.95 Aligned_cols=126 Identities=27% Similarity=0.288 Sum_probs=116.2
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhCCCCCcccc------CCCCCcHHHHHHH---cCCHHHHHHHHhcCCCcccccCCCCcc
Q 016433 113 ESPWWTAAKKADDAALKEIIEAGDGRDVDAV------DNDGRTALLFVSG---LGSEACVRVLAEAGTDLNHRDSGGGLT 183 (389)
Q Consensus 113 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~------d~~g~t~Lh~A~~---~g~~~~v~~Ll~~ga~~~~~d~~~g~t 183 (389)
.+.||.|+..|+.++|+.|++.| +++|.. |..|+||||+||. .|+.++|++|+++|+++|.+|.. |+|
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g--~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~-g~T 209 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANG--QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAAD-GNT 209 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTT--CCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSS-SCC
T ss_pred HHHHHHHHhccCHHHHHHHHhhc--ccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCC-CCc
Confidence 47899999999999999999999 999988 8899999999977 99999999999999999999999 999
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccChH
Q 016433 184 ALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFEYA 257 (389)
Q Consensus 184 pLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~ 257 (389)
|||+|+..|+.++|++|+++||+++.+|..|+||||+ |+..|+.+++++|+++|++..
T Consensus 210 pLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~----------------A~~~~~~~~~~~Ll~~ga~~~ 267 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDI----------------ARKKHHKECEELLEQAQAGTF 267 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHH----------------HHHTTCHHHHHHHHHTCC---
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH----------------HHHcCCHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999999999888666 556899999999999999743
No 98
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.89 E-value=5.6e-23 Score=194.34 Aligned_cols=127 Identities=25% Similarity=0.338 Sum_probs=117.9
Q ss_pred CCChHHHHHHHc-CCHHHHHHHHHhCCCCCccccC--CCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHH
Q 016433 111 EYESPWWTAAKK-ADDAALKEIIEAGDGRDVDAVD--NDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHM 187 (389)
Q Consensus 111 ~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~~~d--~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~ 187 (389)
.+.|+||.|+.. |+.++++.|+++| +++|..+ ..|.||||+|+..|+.++|++|+++|+++|.+|.. |+||||+
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~G--advn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~-G~TpLh~ 274 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHG--ADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSA-GRGPLHH 274 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTT--CCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcC--CCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCC-CCCHHHH
Confidence 457899999999 9999999999999 9999998 89999999999999999999999999999999999 9999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccCh
Q 016433 188 AAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFEY 256 (389)
Q Consensus 188 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~ 256 (389)
|+..|+.+++++|+++|++++.+|..|.||||+ |+..|+.++|++|++++...
T Consensus 275 A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~----------------A~~~g~~~iv~lLl~~~~~~ 327 (368)
T 3jue_A 275 ATILGHTGLACLFLKRGADLGARDSEGRDPLTI----------------AMETANADIVTLLRLAKMRE 327 (368)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH----------------HHHTTCHHHHHHHHHHHC--
T ss_pred HHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHH----------------HHHCCCHHHHHHHHHcCCCc
Confidence 999999999999999999999999999888666 55589999999999988643
No 99
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=1.3e-22 Score=153.46 Aligned_cols=93 Identities=44% Similarity=0.557 Sum_probs=86.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHHh
Q 016433 146 DGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEIL 225 (389)
Q Consensus 146 ~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~ 225 (389)
+|+||||+|+..|+.+++++|++.|+++|.+|.. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~----- 74 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHL----- 74 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH-----
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHH-----
Confidence 4899999999999999999999999999999999 9999999999999999999999999999999998888666
Q ss_pred ccCCCCCHHHHHHHhCcHHHHHHHHHcccC
Q 016433 226 RVTPKGNPMQFARRLGLEAVIRNLEEAVFE 255 (389)
Q Consensus 226 ~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~ 255 (389)
|+..|+.+++++|+++|++
T Consensus 75 -----------A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 75 -----------AARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp -----------HHHTTCHHHHHHHHHTTCC
T ss_pred -----------HHHcCCHHHHHHHHHcCCC
Confidence 5568999999999999975
No 100
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.89 E-value=2.1e-23 Score=164.17 Aligned_cols=108 Identities=28% Similarity=0.362 Sum_probs=102.2
Q ss_pred cccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHH
Q 016433 108 VVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHM 187 (389)
Q Consensus 108 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~ 187 (389)
.+.+|.||||+||..|+.+++++|++.| ++++.+|..|.||||+|+..|+.+++++|+++|++++.+|.. |+||||+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~-g~tpl~~ 81 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKG--ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKD-GNTPEHL 81 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTT--CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTT-CCCTTHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCC-CCCHHHH
Confidence 4578999999999999999999999999 999999999999999999999999999999999999999999 9999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCCcHH
Q 016433 188 AAGYVKPGVAKLLLELGADADVEDDRGLTPL 218 (389)
Q Consensus 188 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL 218 (389)
|+..|+.+++++|+++|++++.++..|.||-
T Consensus 82 A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 9999999999999999999999999999883
No 101
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=9e-22 Score=159.70 Aligned_cols=124 Identities=23% Similarity=0.242 Sum_probs=109.4
Q ss_pred hHHHHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCC
Q 016433 66 YGEVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDN 145 (389)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~ 145 (389)
.+....+.++...+ .+++++|++.+. .....+..|.||||+||..|+.+++++|++.| ++++.+|.
T Consensus 13 ~~~t~l~~A~~~g~-~~~v~~Ll~~g~-----------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~d~ 78 (136)
T 2jab_A 13 DLGKKLLEAARAGQ-DDEVRILMANGA-----------DVNAKDEYGLTPLYLATAHGHLEIVEVLLKNG--ADVNAVDA 78 (136)
T ss_dssp HHHHHHHHHHHHTC-HHHHHHHHHTTC-----------CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCT
T ss_pred cccHHHHHHHHhCC-HHHHHHHHHcCC-----------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCcCCC
Confidence 34455666655554 899999998752 23345678999999999999999999999999 99999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcC
Q 016433 146 DGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELG 204 (389)
Q Consensus 146 ~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~g 204 (389)
.|.||||+|+..|+.+++++|+++|++++.+|.. |.||||+|+..|+.+++++|+++|
T Consensus 79 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 79 IGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKF-GKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCC-CCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999 999999999999999999999876
No 102
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.87 E-value=1.2e-24 Score=206.48 Aligned_cols=168 Identities=17% Similarity=0.091 Sum_probs=126.2
Q ss_pred HHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCC---ccccCC
Q 016433 69 VSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRD---VDAVDN 145 (389)
Q Consensus 69 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~d~ 145 (389)
+..+.++...+ .+++++|++.+.. ......++..|.||||+||..|+.++|++|+++| ++ .+..+.
T Consensus 94 T~Lh~Aa~~G~-~e~v~~Ll~~ga~--------~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~g--ad~~~~~i~~~ 162 (376)
T 2aja_A 94 VICFVAAITGC-SSALDTLCLLLTS--------DEIVKVIQAENYQAFRLAAENGHLHVLNRLCELA--PTEIMAMIQAE 162 (376)
T ss_dssp HHHHHHHHHCC-HHHHHHHTTC--C--------CSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSC--TTTHHHHHSHH
T ss_pred CHHHHHHHcCC-HHHHHHHHHcCCc--------HHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCC--CCccccccCCC
Confidence 34444444333 6666666654321 0111234556789999999999999999999999 65 233333
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccc--ccCCCCccHHHHHH-hcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 016433 146 DGRTALLFVSGLGSEACVRVLAEAGTDLNH--RDSGGGLTALHMAA-GYVKPGVAKLLLELGADADVEDDRGLTPLALAK 222 (389)
Q Consensus 146 ~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~--~d~~~g~tpLh~A~-~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~ 222 (389)
+ .||||+||..|+.++|++|+++|++++. .|.. |.||||+|+ .+|+.++|++|++.|++
T Consensus 163 ~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~-g~TpL~~Aa~~~G~~eiv~~Ll~~ga~---------------- 224 (376)
T 2aja_A 163 N-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAE-NYYAFRWAAVGRGHHNVINFLLDCPVM---------------- 224 (376)
T ss_dssp H-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHH-HHHHHHHHHSTTCCHHHHHHHTTSHHH----------------
T ss_pred C-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCC-CCCHHHHHHHHCCCHHHHHHHHhCCCc----------------
Confidence 3 8999999999999999999999999988 8888 999999999 99999999999987642
Q ss_pred HHhccCCCCCHHHHHHHhCcHHHHHHHHHcccChHH---HHHHHHHcCChhHH
Q 016433 223 EILRVTPKGNPMQFARRLGLEAVIRNLEEAVFEYAE---VQEILEKRGKGDQL 272 (389)
Q Consensus 223 ~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~---~~~~a~~~g~~~~~ 272 (389)
|.|||++|+..|+.+++++|++.|++... ..+.|+..|+.+++
T Consensus 225 -------~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~~l~~A~~~g~~~vv 270 (376)
T 2aja_A 225 -------LAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLV 270 (376)
T ss_dssp -------HHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCS
T ss_pred -------cchHHHHHHHCCCHHHHHHHHhcCcccccccHHHHHHHHCCChhhh
Confidence 34667778889999999999999986432 33446677777754
No 103
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.87 E-value=7.7e-23 Score=166.15 Aligned_cols=121 Identities=23% Similarity=0.187 Sum_probs=103.2
Q ss_pred CCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcH
Q 016433 138 RDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTP 217 (389)
Q Consensus 138 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tp 217 (389)
+|+ .+|..|+||||+|+..|+.+++++|++.|++++.+|.. |+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus 2 ~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 2 IDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHA-GWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79 (137)
T ss_dssp --C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence 677 78999999999999999999999999999999999999 9999999999999999999999999999999888877
Q ss_pred HHHHHHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccCh-------HHHHHHHHHcCChhHHHHHH
Q 016433 218 LALAKEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFEY-------AEVQEILEKRGKGDQLEYLV 276 (389)
Q Consensus 218 L~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~-------~~~~~~a~~~g~~~~~~~L~ 276 (389)
||+ |+..|+.+++++|++.|++. .++.++|...+..+++++|.
T Consensus 80 L~~----------------A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~ 129 (137)
T 3c5r_A 80 LHD----------------AAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPE 129 (137)
T ss_dssp HHH----------------HHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-
T ss_pred HHH----------------HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcc
Confidence 665 55689999999999999863 35556666555555555444
No 104
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.86 E-value=1.5e-21 Score=180.20 Aligned_cols=134 Identities=22% Similarity=0.182 Sum_probs=108.5
Q ss_pred cCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHc---CCHHHHHHHHHhCCCCCccccCCCCCcHHH
Q 016433 76 RALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKK---ADDAALKEIIEAGDGRDVDAVDNDGRTALL 152 (389)
Q Consensus 76 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh 152 (389)
...++.+.+.++++.+...... ......+..|.||||+|+.. |+.+++++|++.| +++|.+|..|+||||
T Consensus 159 ~~~g~~~~v~~ll~~g~d~~~~-----~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g--advn~~d~~G~TpLh 231 (301)
T 2b0o_E 159 ICNRDLLSVLEAFANGQDFGQP-----LPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG--GHLDAKAADGNTALH 231 (301)
T ss_dssp HHTTCHHHHHHHHHTTCCTTSC-----EECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS--SCTTCCCTTCCCHHH
T ss_pred hhccCHHHHHHHHhcCCccccc-----CCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC--CCCCCCCCCCCCHHH
Confidence 3344577788887665321110 00011467899999999997 8999999999999 999999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH
Q 016433 153 FVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKE 223 (389)
Q Consensus 153 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~ 223 (389)
+|+..|+.++|++|+++|++++.+|.. |.||||+|+..|+.+++++|+++|++ .|.||||+|+.
T Consensus 232 ~A~~~g~~~~v~~Ll~~gad~~~~d~~-G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~ 295 (301)
T 2b0o_E 232 YAALYNQPDCLKLLLKGRALVGTVNEA-GETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYS 295 (301)
T ss_dssp HHHHTTCHHHHHHHHHTTCCCSCCCTT-SCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC----
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHh
Confidence 999999999999999999999999999 99999999999999999999999876 35666666543
No 105
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.86 E-value=2.8e-21 Score=153.82 Aligned_cols=113 Identities=35% Similarity=0.436 Sum_probs=103.3
Q ss_pred CChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCC
Q 016433 80 DATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGS 159 (389)
Q Consensus 80 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~ 159 (389)
..+++++|++.+. .....+..|.||||+|+..|+.+++++|++.| ++++.+|..|.||||+|+..|+
T Consensus 14 ~~~~v~~Ll~~~~-----------~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 14 HLEVVKLLLEAGA-----------DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG--ADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CHHHHHHHHHHTC-----------CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTC
T ss_pred cHHHHHHHHHcCC-----------CCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcC--CCCcccCCCCCcHHHHHHHcCh
Confidence 3777888887642 23345678999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCC
Q 016433 160 EACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGAD 206 (389)
Q Consensus 160 ~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 206 (389)
.+++++|+++|++++.+|.. |.||||+|+..|+.+++++|+++|||
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~-g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCCcccCCC-CCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999 99999999999999999999999986
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=1.4e-20 Score=185.78 Aligned_cols=132 Identities=20% Similarity=0.170 Sum_probs=108.4
Q ss_pred HHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHH---cCCHHHHHHHHHhCCCCCccccCCCCC
Q 016433 72 IIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAK---KADDAALKEIIEAGDGRDVDAVDNDGR 148 (389)
Q Consensus 72 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~---~g~~~~v~~Ll~~g~~~~~~~~d~~g~ 148 (389)
++.+...++.+.+..|++.+...... ......+..|.||||+||. .|+.++|++||++| +++|.+|..|+
T Consensus 136 L~~A~~~g~~~~v~~ll~~g~~~n~~-----~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g--a~vn~~d~~g~ 208 (497)
T 3lvq_E 136 LWTAICNRDLLSVLEAFANGQDFGQP-----LPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG--GHLDAKAADGN 208 (497)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSSC-----BCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS--CCTTCCCSSSC
T ss_pred HHHHHhccCHHHHHHHHhhcccccCC-----CCCcccccccchHHHHHHHhcccccHHHHHHHHHcC--CCCCccCCCCC
Confidence 44444445688999999876321111 1122346789999999977 99999999999999 99999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCC
Q 016433 149 TALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVED 211 (389)
Q Consensus 149 t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d 211 (389)
||||+|+..|+.++|++|+++|++++.+|.. |+||||+|+..|+.+++++|+++|++++..+
T Consensus 209 TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~-g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~ 270 (497)
T 3lvq_E 209 TALHYAALYNQPDCLKLLLKGRALVGTVNEA-GETALDIARKKHHKECEELLEQAQAGTFAFP 270 (497)
T ss_dssp CHHHHHTTTTCHHHHHHHHHTCCCCSCCCTT-CCCHHHHHHHTTCHHHHHHHHHTCC------
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHhCCCCCCCc
Confidence 9999999999999999999999999999999 9999999999999999999999999998743
No 107
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=8.1e-20 Score=166.64 Aligned_cols=133 Identities=13% Similarity=0.140 Sum_probs=112.6
Q ss_pred HHHHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHc---CCHHHHHHHHHhCCCCCcccc
Q 016433 67 GEVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKK---ADDAALKEIIEAGDGRDVDAV 143 (389)
Q Consensus 67 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~ 143 (389)
.....+..+...++.+.+..++..+......+ .....+..|.||||+|+.. |+.+++++|+++| +++|.+
T Consensus 129 ~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~-----~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g--a~in~~ 201 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLLQAYADGVDLTEKI-----PLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS--GNLDKQ 201 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBC-----CCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC--SCTTCC
T ss_pred hhhhhhhhHhhhcccHHHHHHHHhhcchhhhc-----cccccccCCCCcchHHHHhcccchHHHHHHHHHCC--CCcccc
Confidence 33445555556666888998888764322211 0222357899999999999 8999999999999 999999
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCC
Q 016433 144 DNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADA 207 (389)
Q Consensus 144 d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 207 (389)
|..|+||||+|+..|+.++|++|+++|++++.+|.. |.||||+|+..|+.+++++|+++|++.
T Consensus 202 d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~-g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 202 TGKGSTALHYCCLTDNAECLKLLLRGKASIEIANES-GETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCC-CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999 999999999999999999999998864
No 108
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.83 E-value=5e-21 Score=152.43 Aligned_cols=95 Identities=24% Similarity=0.274 Sum_probs=86.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH
Q 016433 144 DNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKE 223 (389)
Q Consensus 144 d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~ 223 (389)
+..|.||||+|+..|+.+++++|++.|++++.+|.. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~--- 79 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEG-GRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLS--- 79 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTT-SSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHH---
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHH---
Confidence 467889999999999999999999999999999999 9999999999999999999999999999999988888666
Q ss_pred HhccCCCCCHHHHHHHhCcHHHHHHHHHcccC
Q 016433 224 ILRVTPKGNPMQFARRLGLEAVIRNLEEAVFE 255 (389)
Q Consensus 224 ~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~ 255 (389)
|+..|+.+++++|++.|++
T Consensus 80 -------------A~~~~~~~~v~~Ll~~ga~ 98 (123)
T 3aaa_C 80 -------------AVYEGHVSCVKLLLSKGAD 98 (123)
T ss_dssp -------------HHHHTCHHHHHHHHHTTCC
T ss_pred -------------HHHcCCHHHHHHHHHcCCC
Confidence 5558999999999999885
No 109
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.83 E-value=1.9e-22 Score=172.32 Aligned_cols=78 Identities=32% Similarity=0.367 Sum_probs=73.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHH
Q 016433 144 DNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVED-DRGLTPLALAK 222 (389)
Q Consensus 144 d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~tpL~~A~ 222 (389)
+..|.||||+|+..|+.+++++|++ |++++.+|.. |+||||+|+..|+.+++++|+++|++++.+| ..|+||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDEN-GRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 5678999999999999999999999 9999999999 9999999999999999999999999999988 88888877765
Q ss_pred H
Q 016433 223 E 223 (389)
Q Consensus 223 ~ 223 (389)
.
T Consensus 119 ~ 119 (183)
T 3deo_A 119 G 119 (183)
T ss_dssp H
T ss_pred h
Confidence 4
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.82 E-value=1.7e-20 Score=147.36 Aligned_cols=100 Identities=31% Similarity=0.405 Sum_probs=92.7
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 016433 142 AVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALA 221 (389)
Q Consensus 142 ~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A 221 (389)
.+|..|+||||+||..|+.+++++|+++|++++.+|.. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~- 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKD-GNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHL- 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSS-SCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHH-
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHH-
Confidence 47889999999999999999999999999999999999 9999999999999999999999999999999988887666
Q ss_pred HHHhccCCCCCHHHHHHHhCcHHHHHHHHHcccChHH
Q 016433 222 KEILRVTPKGNPMQFARRLGLEAVIRNLEEAVFEYAE 258 (389)
Q Consensus 222 ~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~ 258 (389)
|+..|+.+++++|+++|++...
T Consensus 82 ---------------A~~~~~~~~~~~Ll~~ga~~n~ 103 (115)
T 2l6b_A 82 ---------------AKKNGHHEIVKLLDAKGADVNA 103 (115)
T ss_dssp ---------------HHTTTCHHHHHHHHTTSSSHHH
T ss_pred ---------------HHHCCCHHHHHHHHHcCCCCCc
Confidence 5558999999999999998643
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.82 E-value=1.3e-19 Score=171.37 Aligned_cols=143 Identities=20% Similarity=0.191 Sum_probs=108.6
Q ss_pred HHHHHhccCCCCChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCC
Q 016433 69 VSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGR 148 (389)
Q Consensus 69 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~ 148 (389)
...+.++...+..+++.+|++.+. +.+..+.+..|.||||+|+..|+.++|++|+++| +++|.+|..|+
T Consensus 201 t~L~~Aa~~~g~~~~v~~LL~~Ga---------dvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G--advn~~d~~G~ 269 (368)
T 3jue_A 201 ALLFRASGHPPSLPTMADALAHGA---------DVNWVNGGQDNATPLIQATAANSLLACEFLLQNG--ANVNQADSAGR 269 (368)
T ss_dssp HHHHHHTSSSCCHHHHHHHHHTTC---------CTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSC
T ss_pred cHHHHHHHccCCHHHHHHHHHcCC---------CCCccccccCCCCHHHHHHHCCCHHHHHHHHHcC--CCCCCCCCCCC
Confidence 445555555366899999998752 1222222368999999999999999999999999 99999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCC---CCCCCCCCCCcHHHHHHH
Q 016433 149 TALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGA---DADVEDDRGLTPLALAKE 223 (389)
Q Consensus 149 t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga---~~~~~d~~g~tpL~~A~~ 223 (389)
||||+|+..|+.++|++|+++|++++.+|.. |.||||+|+..|+.+++++|+..+. +....+..+.|+++++..
T Consensus 270 TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~-G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 270 GPLHHATILGHTGLACLFLKRGADLGARDSE-GRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRD 346 (368)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHHHC---------------------
T ss_pred CHHHHHHHcCcHHHHHHHHHCcCCCCCcCCC-CCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHH
Confidence 9999999999999999999999999999999 9999999999999999999998863 334455667777766544
No 112
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.82 E-value=9.2e-21 Score=166.87 Aligned_cols=121 Identities=12% Similarity=0.092 Sum_probs=94.1
Q ss_pred ChHHHHHHHcCCCCCCccccCcccccccccCCChHHHHHHHcCCHHHHHHHHHh-CCCCCccccCCCCCcHHHHHHHcCC
Q 016433 81 ATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWTAAKKADDAALKEIIEA-GDGRDVDAVDNDGRTALLFVSGLGS 159 (389)
Q Consensus 81 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~d~~g~t~Lh~A~~~g~ 159 (389)
.+++++|++.+ ......+..|.||||+||..|+.++|++|++. | +++|.+|..|+||||+|+..|+
T Consensus 86 ~~~v~~Ll~~g-----------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g--~~~~~~d~~g~tpL~~A~~~~~ 152 (222)
T 3ehr_A 86 LSWLRECLDNR-----------VGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPN--IELNQQNKLGDTALHAAAWKGY 152 (222)
T ss_dssp HHHHHHHHHTT-----------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTT--CCCCCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHHHhCC-----------CCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCC--CCccccCCCCCCHHHHHHHcCC
Confidence 56666666543 33444567899999999999999999999998 7 9999999999999999999999
Q ss_pred HHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCC
Q 016433 160 EACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGL 215 (389)
Q Consensus 160 ~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~ 215 (389)
.++|++|+++|++++.+|.. |.||||+|+..++.++++.|++.|++.+..+.+|+
T Consensus 153 ~~~v~~Ll~~ga~~~~~~~~-g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 153 ADIVQLLLAKGARTDLRNIE-KKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp HHHHHHHHHHTCCSCCCCTT-SCCHHHHCCSHHHHHHHC-----------------
T ss_pred HHHHHHHHHcCCCCccccCC-CCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 99999999999999999999 99999999999999999999999999888776654
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.81 E-value=7.5e-20 Score=142.71 Aligned_cols=94 Identities=26% Similarity=0.380 Sum_probs=86.0
Q ss_pred cccccccCCChHHHHHHHcCCHHHHHHHHHhCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCcc
Q 016433 104 IAKDVVAEYESPWWTAAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLT 183 (389)
Q Consensus 104 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~t 183 (389)
.....+.+|.||||+||..|+.+++++|++.| +++|.+|..|.||||+|+..|+.+++++|+++|++++.+|.. |+|
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~-g~t 92 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANG--ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKF-GKT 92 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCC
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcC--CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccC-CCc
Confidence 33456778999999999999999999999998 999999999999999999999999999999999999999999 999
Q ss_pred HHHHHHhcCCHHHHHHH
Q 016433 184 ALHMAAGYVKPGVAKLL 200 (389)
Q Consensus 184 pLh~A~~~g~~~~v~~L 200 (389)
|||+|+..|+.+++++|
T Consensus 93 pl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 93 AFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHh
Confidence 99999999999999987
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=2.6e-19 Score=139.62 Aligned_cols=94 Identities=33% Similarity=0.407 Sum_probs=83.0
Q ss_pred CccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCccHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHH
Q 016433 139 DVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDSGGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPL 218 (389)
Q Consensus 139 ~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL 218 (389)
.....|.+|.||||+|+..|+.+++++|++.|++++.+|.. |+||||+|+..|+.+++++|+++|++++.+|..|+|||
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~-g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl 94 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKN-GSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAF 94 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHH
Confidence 45567889999999999999999999999999999999999 99999999999999999999999999999999988886
Q ss_pred HHHHHHhccCCCCCHHHHHHHhCcHHHHHHH
Q 016433 219 ALAKEILRVTPKGNPMQFARRLGLEAVIRNL 249 (389)
Q Consensus 219 ~~A~~~~~~~~g~t~l~~A~~~g~~~~v~~L 249 (389)
|+ |+..|+.+++++|
T Consensus 95 ~~----------------A~~~~~~~~~~~L 109 (110)
T 2zgd_A 95 DI----------------SIDNGNEDLAEIL 109 (110)
T ss_dssp HH----------------HHHHTCHHHHHHH
T ss_pred HH----------------HHHcCCHHHHHHh
Confidence 66 5558999999987
No 115
>1x3p_A Cpsrp43; chromo-2 domain, chloroplasts, LHCP, protein translocation, unknown function; NMR {Arabidopsis thaliana} SCOP: b.34.13.2
Probab=98.78 E-value=7.1e-10 Score=72.88 Aligned_cols=47 Identities=57% Similarity=1.123 Sum_probs=41.5
Q ss_pred HhhhcccccCCCCe-eEEEeeccCCCCCcccCCCCChHHHHHHHHhhh
Q 016433 310 EGVLGKRMGDDGKR-EFLVKWTDIDEATWEPEENVDPDLIKEFEDSQS 356 (389)
Q Consensus 310 e~il~~r~~~~g~~-~~lvkw~~~~~~tWe~~~~l~~~li~a~~~~~~ 356 (389)
|.|+++|...+|+. +|++||+||+++||||++|+++++|.+|..++.
T Consensus 4 E~Ild~r~~~~g~~~~YlVKWkgy~~~TWEp~~nL~~~li~~f~~~~~ 51 (54)
T 1x3p_A 4 ESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTLVLLYQQQQP 51 (54)
T ss_dssp SCCCCBSSCSSSCCCCBCCCCSSSSSCSCSTTCCSSSSSHHHHTSSCC
T ss_pred EEEEEEEEcCCCcEEEEEEEECCCCcCCccchHHCCHHHHHHHHHHcc
Confidence 78899998665887 999999999999999999999889999977543
No 116
>3f2u_A Chromobox protein homolog 1; human chromobox homolog 1, CBX1, structural genomics, struct genomics consortium, SGC, centromere, nucleus; 1.80A {Homo sapiens} PDB: 3tzd_A* 2l11_A* 3dm1_A*
Probab=98.52 E-value=6e-09 Score=69.08 Aligned_cols=46 Identities=57% Similarity=1.006 Sum_probs=38.8
Q ss_pred HhhhcccccCCCCeeEEEeeccCC--CCCcccCCCCC-hHHHHHHHHhhh
Q 016433 310 EGVLGKRMGDDGKREFLVKWTDID--EATWEPEENVD-PDLIKEFEDSQS 356 (389)
Q Consensus 310 e~il~~r~~~~g~~~~lvkw~~~~--~~tWe~~~~l~-~~li~a~~~~~~ 356 (389)
+.|+++|.. +|...|++||+|+. ++||||++|+. +++|.+|..+++
T Consensus 6 E~Il~~r~~-~g~~~YlVkWkGy~~~~~TWEp~~nl~~~~li~~f~~~qk 54 (55)
T 3f2u_A 6 EKVLDRRVV-KGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQK 54 (55)
T ss_dssp EEEEEEEEE-TTEEEEEEEETTSCGGGCEEEEGGGCCCHHHHHHHHC---
T ss_pred EEEEEEEEe-CCeEEEEEEEEeCCCccCCeeEHHHCCCHHHHHHHHHHcc
Confidence 788888874 78999999999994 78999999998 999999988664
No 117
>2k1b_A Chromobox protein homolog 7; alpha/beta protein, chromatin regulator, nucleus, repressor, transcription, transcription regulation; NMR {Homo sapiens} PDB: 2l12_A* 2l1b_A*
Probab=98.50 E-value=1.1e-08 Score=71.48 Aligned_cols=49 Identities=43% Similarity=0.826 Sum_probs=41.6
Q ss_pred HHHHHHhhhcccccCCCCeeEEEeeccCC--CCCcccCCCCC-hHHHHHHHHhh
Q 016433 305 EYAVAEGVLGKRMGDDGKREFLVKWTDID--EATWEPEENVD-PDLIKEFEDSQ 355 (389)
Q Consensus 305 e~~v~e~il~~r~~~~g~~~~lvkw~~~~--~~tWe~~~~l~-~~li~a~~~~~ 355 (389)
+|.| |.|+++|. .+|+.+|+|||+||. .+||||++||. +++|.+|+.++
T Consensus 21 eyeV-EkIld~r~-~~g~~~YlVKWkGy~~~~~TWEp~enL~~~~li~~F~~~~ 72 (73)
T 2k1b_A 21 VFAV-ESIRKKRV-RKGKVEYLVKWKGWPPKYSTWEPEEHILDPRLVMAYEEKE 72 (73)
T ss_dssp CCCC-SEEEEEEE-ETTEEEEEEECTTCCGGGCCEEETTSCSCHHHHHHHHTSC
T ss_pred eEEE-EEEEEEEE-cCCcEEEEEEECCCCcccCeecchHHCCCHHHHHHHHHhc
Confidence 3444 89999987 578999999999994 58999999997 89999998754
No 118
>2dnv_A Chromobox protein homolog 8; chromo domain, histone H3 tail, choromatin organization modifier, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.34.13.2
Probab=98.50 E-value=1.6e-08 Score=69.24 Aligned_cols=46 Identities=43% Similarity=0.835 Sum_probs=40.5
Q ss_pred HhhhcccccCCCCeeEEEeeccC--CCCCcccCCCCC-hHHHHHHHHhhh
Q 016433 310 EGVLGKRMGDDGKREFLVKWTDI--DEATWEPEENVD-PDLIKEFEDSQS 356 (389)
Q Consensus 310 e~il~~r~~~~g~~~~lvkw~~~--~~~tWe~~~~l~-~~li~a~~~~~~ 356 (389)
+.|+++|. .+|..+|+|||+++ .++||||+++|. +++|.+|+.++.
T Consensus 14 E~Il~~r~-~~g~~~YlVKWkGy~~~~~TWEp~~~l~~~~li~~f~~~~~ 62 (64)
T 2dnv_A 14 EALLKRRI-RKGRMEYLVKWKGWSQKYSTWEPEENILDARLLAAFESGPS 62 (64)
T ss_dssp CCEEEEEE-SSSSEEEEECCSSCCCSSCCEEETTTCCCHHHHHHHHCCTT
T ss_pred EEEEEEEE-eCCcEEEEEEECCCCcccCCccCHhHCCCHHHHHHHHHHcc
Confidence 88999887 57899999999999 479999999997 899999987653
No 119
>3fdt_A Chromobox protein homolog 5; chromobox homolog5, CBX5, structural GENO structural genomics consortium, SGC, centromere, nucleus, phosphoprotein; HET: M3L; 2.00A {Homo sapiens}
Probab=98.47 E-value=4.6e-09 Score=70.70 Aligned_cols=48 Identities=44% Similarity=0.847 Sum_probs=38.9
Q ss_pred HhhhcccccCCCCeeEEEeeccCC--CCCcccCCCCC-hHHHHHHHHhhhhh
Q 016433 310 EGVLGKRMGDDGKREFLVKWTDID--EATWEPEENVD-PDLIKEFEDSQSDG 358 (389)
Q Consensus 310 e~il~~r~~~~g~~~~lvkw~~~~--~~tWe~~~~l~-~~li~a~~~~~~~~ 358 (389)
+.|++.|.. +|...|++||+|+. ++||||++|++ +++|.+|..++..+
T Consensus 7 E~Il~~r~~-~g~~~YlVkWkGy~~~~~TWEp~~nl~~~~li~~f~~~~k~~ 57 (59)
T 3fdt_A 7 EKVLDRRVV-KGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMKKYKKM 57 (59)
T ss_dssp EEEEEEEEE-TTEEEEEEEETTSCGGGCEEEEGGGEECHHHHHHHHC-----
T ss_pred EEEEEEEEe-CCeEEEEEEEeCCCcccCCccchhHCCCHHHHHHHHHhhhhc
Confidence 788888874 78999999999994 68999999997 99999999887654
No 120
>2rsn_A Chromo domain-containing protein 1; chromodomain, protein-peptide complex, RNA-mediated gene SIL chromosomal protein, methylation; HET: M3L; NMR {Schizosaccharomyces pombe}
Probab=98.46 E-value=3.8e-08 Score=69.40 Aligned_cols=50 Identities=32% Similarity=0.760 Sum_probs=43.2
Q ss_pred HHHHHHhhhcccccCCCCeeEEEeeccC--CCCCcccCCCCC--hHHHHHHHHhh
Q 016433 305 EYAVAEGVLGKRMGDDGKREFLVKWTDI--DEATWEPEENVD--PDLIKEFEDSQ 355 (389)
Q Consensus 305 e~~v~e~il~~r~~~~g~~~~lvkw~~~--~~~tWe~~~~l~--~~li~a~~~~~ 355 (389)
+|.| +.|+++|...+|+..|++||+|| +++||||++||. +++|..|+.++
T Consensus 21 ~yeV-E~Il~~r~~~~g~~~YlVkWkGy~~~~~TWEp~~nl~~~~~li~~f~~~~ 74 (75)
T 2rsn_A 21 VYEV-EDILADRVNKNGINEYYIKWAGYDWYDNTWEPEQNLFGAEKVLKKWKKRK 74 (75)
T ss_dssp CEEE-EEEEEEEECSSSCEEEEEEEESSCGGGCEEEEGGGGTTTHHHHHHHHHHC
T ss_pred eEEE-EEEEEEEEcCCCcEEEEEEECCCCCcCCeeecHHHccChHHHHHHHHHhh
Confidence 3445 89999998778999999999999 578999999995 78999998764
No 121
>1q3l_A Heterochromatin protein 1; chromodomain, HP1, chromatin, methyllysine, monomethyllysine, structural protein; HET: MLZ; 1.64A {Drosophila melanogaster} SCOP: b.34.13.2 PDB: 1kne_A* 1kna_A*
Probab=98.43 E-value=1.1e-08 Score=70.65 Aligned_cols=49 Identities=45% Similarity=0.923 Sum_probs=41.9
Q ss_pred HHHHHhhhcccccCCCCeeEEEeeccC--CCCCcccCCCCC-hHHHHHHHHhhh
Q 016433 306 YAVAEGVLGKRMGDDGKREFLVKWTDI--DEATWEPEENVD-PDLIKEFEDSQS 356 (389)
Q Consensus 306 ~~v~e~il~~r~~~~g~~~~lvkw~~~--~~~tWe~~~~l~-~~li~a~~~~~~ 356 (389)
|.| +.|+++|. .+|..+|+|||+|+ .++||||+++|. +++|.+|..++.
T Consensus 17 y~V-EkIld~R~-~~g~~eYlVKWkGy~~~~~TWEp~enL~c~~lI~~F~~~~k 68 (69)
T 1q3l_A 17 YAV-EKIIDRRV-RKGMVEYYLKWKGYPETENTWEPENNLDCQDLIQQYEASRK 68 (69)
T ss_dssp EEE-EEEEEEEE-ETTEEEEEEEETTSCGGGCEEEEGGGEECHHHHHHHHHHC-
T ss_pred EEE-EEEEEEEE-ECCeEEEEEEEcCCCcccCCccchHHCCCHHHHHHHHHHcc
Confidence 444 89999988 47899999999999 479999999998 899999988654
No 122
>3mts_A Histone-lysine N-methyltransferase SUV39H1; histone methyltransferase, histone-lysine N-methyltransferas SUV39H1, histone H3, TRI-methylation; 2.20A {Homo sapiens}
Probab=98.41 E-value=9.5e-08 Score=65.12 Aligned_cols=47 Identities=28% Similarity=0.561 Sum_probs=40.7
Q ss_pred HhhhcccccCCCCeeEEEeeccC--CCCCcccCCCCC-hHHHHHHHHhhhh
Q 016433 310 EGVLGKRMGDDGKREFLVKWTDI--DEATWEPEENVD-PDLIKEFEDSQSD 357 (389)
Q Consensus 310 e~il~~r~~~~g~~~~lvkw~~~--~~~tWe~~~~l~-~~li~a~~~~~~~ 357 (389)
|.|++.+. .+|..+|++||+|| .++||||++|+. ++||.+|......
T Consensus 4 E~Il~~r~-~~g~~~YlVKWkGy~~~~~TWEp~~nl~c~~li~~f~~~~~~ 53 (64)
T 3mts_A 4 EYLCDYKK-IREQEYYLVKWRGYPDSESTWEPRQNLKCVRILKQFHKDLER 53 (64)
T ss_dssp EEEEEEEE-CSSCEEEEEEETTSCGGGCEEEEGGGCCCHHHHHHHHHHHHH
T ss_pred eEEEEEEE-eCCeEEEEEEEecCCCcCCcEeEHHHCCCHHHHHHHHHHHHH
Confidence 67888887 47899999999999 458999999998 9999999986654
No 123
>3i91_A Chromobox protein homolog 8; chromobox homolog 8, CBX8, structural genomics structural genomics consortium, SGC, chromatin regulator, N phosphoprotein, repressor; HET: M3L; 1.55A {Homo sapiens} SCOP: b.34.13.2 PDB: 3gv6_A* 3i90_A*
Probab=98.38 E-value=5.8e-08 Score=64.07 Aligned_cols=44 Identities=43% Similarity=0.869 Sum_probs=38.8
Q ss_pred HhhhcccccCCCCeeEEEeeccCC--CCCcccCCCCC-hHHHHHHHHh
Q 016433 310 EGVLGKRMGDDGKREFLVKWTDID--EATWEPEENVD-PDLIKEFEDS 354 (389)
Q Consensus 310 e~il~~r~~~~g~~~~lvkw~~~~--~~tWe~~~~l~-~~li~a~~~~ 354 (389)
+.|+++|. .+|+..|++||+|+. .+||+|++|+. ++||.+|+++
T Consensus 7 E~Il~~r~-~~g~~~YlVkWkGy~~~~~TWEp~~nl~~~~li~~f~~R 53 (54)
T 3i91_A 7 EALLKRRI-RKGRMEYLVKWKGWSQKYSTWEPEENILDARLLAAFEER 53 (54)
T ss_dssp EEEEEEEE-ETTEEEEEEEETTSCGGGCEEEEGGGBCCHHHHHHHHHC
T ss_pred EEEEEEEE-eCCcEEEEEEEeCCCcccCcccchhHCCCHHHHHHHHhc
Confidence 78888887 478999999999994 58999999998 9999999874
No 124
>1pdq_A Polycomb protein; methyllysine, chromodomain, polycomb, lysine methylation, trimethyllysine, cation-PI, chromo, structural protein; HET: M3L; 1.76A {Drosophila melanogaster} SCOP: b.34.13.2
Probab=98.38 E-value=4.3e-08 Score=68.21 Aligned_cols=49 Identities=39% Similarity=0.684 Sum_probs=39.9
Q ss_pred HHHHHHhhhcccccCCCCeeEEEeeccC--CCCCcccCCCCC-hHHHHHHHHhh
Q 016433 305 EYAVAEGVLGKRMGDDGKREFLVKWTDI--DEATWEPEENVD-PDLIKEFEDSQ 355 (389)
Q Consensus 305 e~~v~e~il~~r~~~~g~~~~lvkw~~~--~~~tWe~~~~l~-~~li~a~~~~~ 355 (389)
+|.| |.|+++|. .+|..+|+|||+|| .++||||+++|. +++|.+|..++
T Consensus 20 eyeV-EkIld~r~-~~g~~~YlVKWkGy~~~~nTWEP~enL~~~~lI~~F~~~~ 71 (72)
T 1pdq_A 20 VYAA-EKIIQKRV-KKGVVEYRVKWKGWNQRYNTWEPEVNILDRRLIDIYEQTN 71 (72)
T ss_dssp EEEE-EEEEEEEE-ETTEEEEEEEETTSCGGGCEEEEGGGCCSTHHHHHHC---
T ss_pred eEEE-EEEEEEEE-eCCcEEEEEEECCCCCccCeecchHHCCCHHHHHHHHHhc
Confidence 3444 89999988 57899999999999 458999999997 89999997754
No 125
>1g6z_A CLR4 protein; transferase; NMR {Schizosaccharomyces pombe} SCOP: b.34.13.2
Probab=98.37 E-value=4.6e-08 Score=68.27 Aligned_cols=48 Identities=21% Similarity=0.661 Sum_probs=41.5
Q ss_pred HhhhcccccCCCCee-EEEeeccCC--CCCcccCCCC-C-hHHHHHHHHhhhh
Q 016433 310 EGVLGKRMGDDGKRE-FLVKWTDID--EATWEPEENV-D-PDLIKEFEDSQSD 357 (389)
Q Consensus 310 e~il~~r~~~~g~~~-~lvkw~~~~--~~tWe~~~~l-~-~~li~a~~~~~~~ 357 (389)
+.|+++|...+|... |+|||+||. ++||||++|| . +++|.+|......
T Consensus 12 E~Il~~r~~~~g~~~~YlVKWkGy~~~~~TWEp~enL~~~~~li~~f~~~~~~ 64 (70)
T 1g6z_A 12 ERIVDEKLDRNGAVKLYRIRWLNYSSRSDTWEPPENLSGCSAVLAEWKRRKRR 64 (70)
T ss_dssp CSCSEEECCTTSSCCEEEECCTTTTSSCCEEECGGGGSSCHHHHHHHHHHHTT
T ss_pred EEEEEEEEcCCCcEEEEEEEECCCCCCCCceecHHHHhhhHHHHHHHHHhccc
Confidence 899999986658888 999999994 7999999999 4 8999999886553
No 126
>1pfb_A Polycomb protein; chromatin, histone methylation, polycomb, chromodomain, peptide binding protein; HET: M3L; 1.40A {Drosophila melanogaster} SCOP: b.34.13.2
Probab=98.35 E-value=6.1e-08 Score=64.21 Aligned_cols=45 Identities=38% Similarity=0.701 Sum_probs=39.5
Q ss_pred HhhhcccccCCCCeeEEEeeccCC--CCCcccCCCCC-hHHHHHHHHhh
Q 016433 310 EGVLGKRMGDDGKREFLVKWTDID--EATWEPEENVD-PDLIKEFEDSQ 355 (389)
Q Consensus 310 e~il~~r~~~~g~~~~lvkw~~~~--~~tWe~~~~l~-~~li~a~~~~~ 355 (389)
+.|+++|. .+|..+|++||+|+. .+||||+++|. +++|.+|..++
T Consensus 7 E~Il~~r~-~~g~~~YlVKWkgy~~~~~TWEp~~~l~~~~li~~f~~~~ 54 (55)
T 1pfb_A 7 EKIIQKRV-KKGVVEYRVKWKGWNQRYNTWEPEVNILDRRLIDIYEQTN 54 (55)
T ss_dssp EEEEEEEE-ETTEEEEEEEETTSCGGGCEEEEGGGCCSTHHHHHHHTSC
T ss_pred EEEEEEEE-eCCeEEEEEEEcCCCCccCcEeEHHHCCCHHHHHHHHHhc
Confidence 78888887 478999999999994 59999999998 89999998764
No 127
>2rso_A Chromatin-associated protein SWI6; chromodomain, silencing, chromosomal protein, Met transcription; NMR {Schizosaccharomyces pombe}
Probab=98.33 E-value=7.1e-08 Score=70.91 Aligned_cols=51 Identities=37% Similarity=0.747 Sum_probs=42.8
Q ss_pred HHHHHHhhhccccc-CCCCeeEEEeeccCC---CCCcccCCCCC--hHHHHHHHHhhh
Q 016433 305 EYAVAEGVLGKRMG-DDGKREFLVKWTDID---EATWEPEENVD--PDLIKEFEDSQS 356 (389)
Q Consensus 305 e~~v~e~il~~r~~-~~g~~~~lvkw~~~~---~~tWe~~~~l~--~~li~a~~~~~~ 356 (389)
+|.| +.|+++|.. ++|+..|||||+||. .+||||++||. ++||.+|...+.
T Consensus 30 ey~V-E~Il~~r~~~~~g~~~YlVkWkGy~~~~~~TWEP~~nl~~c~~li~~f~~~~~ 86 (92)
T 2rso_A 30 EYVV-EKVLKHRMARKGGGYEYLLKWEGYDDPSDNTWSSEADCSGCKQLIEAYWNEHG 86 (92)
T ss_dssp CCCE-EEEEEEEECTTSSCEEEEEEETTCCCCTTSEEECGGGGGTSHHHHHHHHHHHT
T ss_pred eEEE-EEEEEEEeecCCCEEEEEEEEccCCCcccCccccHHHHhhHHHHHHHHHHHcC
Confidence 4656 999999875 468999999999994 37999999995 899999988653
No 128
>3h91_A Chromobox protein homolog 2; human chromobox homolog 2, CBX2, structural genomics, structural genomics consortium, SGC, chromatin regulator, D binding, nucleus; HET: M3L; 1.50A {Homo sapiens} SCOP: b.34.13.2 PDB: 2k28_A 3i8z_A
Probab=98.31 E-value=9.1e-08 Score=63.06 Aligned_cols=44 Identities=45% Similarity=0.894 Sum_probs=38.3
Q ss_pred HhhhcccccCCCCeeEEEeeccCC--CCCcccCCCCC-hHHHHHHHHh
Q 016433 310 EGVLGKRMGDDGKREFLVKWTDID--EATWEPEENVD-PDLIKEFEDS 354 (389)
Q Consensus 310 e~il~~r~~~~g~~~~lvkw~~~~--~~tWe~~~~l~-~~li~a~~~~ 354 (389)
+.|+++|. .+|...|++||+|+. .+||+|++|+. +++|.+|..+
T Consensus 7 E~Il~~r~-~~g~~~YlVkWkGy~~~~~TWEp~~nl~~~~li~~f~~r 53 (54)
T 3h91_A 7 ECILSKRL-RKGKLEYLVKWRGWSSKHNSWEPEENILDPRLLLAFQKK 53 (54)
T ss_dssp EEEEEEEE-ETTEEEEEEEETTSCGGGCEEEEGGGBCSHHHHHHHHC-
T ss_pred EEEEEEEE-eCCcEEEEEEEeCCCCcCCCeecHhHCCCHHHHHHHHhc
Confidence 78888887 478999999999994 68999999997 9999999764
No 129
>2dnt_A Chromodomain protein, Y chromosome-like, isoform B; histone H3 tail, choromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.13.2
Probab=98.28 E-value=1.2e-07 Score=67.68 Aligned_cols=47 Identities=36% Similarity=0.870 Sum_probs=41.0
Q ss_pred HhhhcccccCCCCeeEEEeeccCC--CCCcccCCCC-C-hHHHHHHHHhhh
Q 016433 310 EGVLGKRMGDDGKREFLVKWTDID--EATWEPEENV-D-PDLIKEFEDSQS 356 (389)
Q Consensus 310 e~il~~r~~~~g~~~~lvkw~~~~--~~tWe~~~~l-~-~~li~a~~~~~~ 356 (389)
+.|+++|...+|..+|+|||+++. ++|||++++| + +++|.+|...+.
T Consensus 17 E~Il~~r~~~~g~~~YlVKWkGy~~~~~TWEp~~~l~~~~~li~~f~~~~~ 67 (78)
T 2dnt_A 17 ERIVDKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEEYIHDFNRRHT 67 (78)
T ss_dssp CCEEEEEECTTSCEEEEECBTTBCGGGCEEEETTTCTTCHHHHHHHHHHHS
T ss_pred EEEEEEEEcCCCcEEEEEEECCCCccCCceecHHHHHhHHHHHHHHHhhhh
Confidence 889999886788999999999994 7999999999 4 889999987553
No 130
>2d9u_A Chromobox protein homolog 2 (isoform 2); chromobox homolog 2, chromo domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.28 E-value=1.1e-07 Score=67.06 Aligned_cols=48 Identities=42% Similarity=0.841 Sum_probs=41.5
Q ss_pred HhhhcccccCCCCeeEEEeeccC--CCCCcccCCCCC-hHHHHHHHHhhhhh
Q 016433 310 EGVLGKRMGDDGKREFLVKWTDI--DEATWEPEENVD-PDLIKEFEDSQSDG 358 (389)
Q Consensus 310 e~il~~r~~~~g~~~~lvkw~~~--~~~tWe~~~~l~-~~li~a~~~~~~~~ 358 (389)
+.|+++|. .+|..+|+|||+++ .++||||+++|. +++|.+|..+....
T Consensus 14 E~Il~~r~-~~g~~~YlVKWkGy~~~~~TWEp~~nl~~~~li~~f~~~~~~k 64 (74)
T 2d9u_A 14 ECILSKRL-RKGKLEYLVKWRGWSSKHNSWEPEENILDPRLLLAFQKKEHEK 64 (74)
T ss_dssp EEEEEEEE-ETTEEEEEEEETTSCTTTCEEEEGGGCCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEE-eCCcEEEEEEECCCCCccCccccHHHCCCHHHHHHHHHhhhhh
Confidence 88999988 47899999999999 479999999997 89999998865543
No 131
>1ap0_A Modifier protein 1; chromatin-binding, protein interaction motif, alpha+beta; NMR {Mus musculus} SCOP: b.34.13.2 PDB: 1guw_A*
Probab=98.22 E-value=3.8e-07 Score=64.10 Aligned_cols=47 Identities=55% Similarity=0.988 Sum_probs=41.1
Q ss_pred HhhhcccccCCCCeeEEEeeccCC--CCCcccCCCCC-hHHHHHHHHhhhh
Q 016433 310 EGVLGKRMGDDGKREFLVKWTDID--EATWEPEENVD-PDLIKEFEDSQSD 357 (389)
Q Consensus 310 e~il~~r~~~~g~~~~lvkw~~~~--~~tWe~~~~l~-~~li~a~~~~~~~ 357 (389)
+.|+++|. .+|...|+|||+|+. ++||||+++|. +++|.+|..++..
T Consensus 17 E~Il~~r~-~~g~~~YlVKWkGy~~~~~TWEp~~nL~~~~li~~f~~~~~~ 66 (73)
T 1ap0_A 17 EKVLDRRV-VKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKT 66 (73)
T ss_dssp EEEEEEEE-CSSSEEEEEEEESSSSCCCEEEETTTCCCHHHHHHHTTTTTS
T ss_pred EEEEEEEE-eCCeEEEEEEECCCCCccCcEeeHHHCCCHHHHHHHHHHhhc
Confidence 88999987 478999999999994 79999999998 8999999876543
No 132
>3g7l_A Chromo domain-containing protein 1; chromodomain, protein-peptide complex, silencing, cell cycle, chromosome partition, DNA-binding, nucleus; HET: M3L; 2.20A {Schizosaccharomyces pombe}
Probab=98.22 E-value=2.8e-07 Score=62.28 Aligned_cols=46 Identities=28% Similarity=0.611 Sum_probs=38.1
Q ss_pred HhhhcccccCCCCe-eEEEeeccCC--CCCcccCCCCC-hHHHHHHHHhhh
Q 016433 310 EGVLGKRMGDDGKR-EFLVKWTDID--EATWEPEENVD-PDLIKEFEDSQS 356 (389)
Q Consensus 310 e~il~~r~~~~g~~-~~lvkw~~~~--~~tWe~~~~l~-~~li~a~~~~~~ 356 (389)
+.|++.|.. +|.. .|++||+||. .+||||++|+. +++|.+|.++.+
T Consensus 11 E~Il~~r~~-~g~~~~YlVkWkGy~~~~~TWEp~~nl~~~~li~~~~~~rK 60 (61)
T 3g7l_A 11 EDILADRVN-KNGINEYYIKWAGYDWYDNTWEPEQNLFGAEKVLKKWKKRK 60 (61)
T ss_dssp EEEEEEEEC-TTSCEEEEEEETTSCGGGCEEEEGGGGTBCHHHHHHHHHC-
T ss_pred EEEEEEEEE-CCCEEEEEEEEeCCCCcCCceeeHhHCCCHHHHHHHHHHhc
Confidence 888999885 5665 9999999994 58999999997 888888877654
No 133
>3lwe_A M-phase phosphoprotein 8; MPP8, structural genomics, structural genomics consortium, S repeat, nucleus, cell cycle; 2.05A {Homo sapiens} SCOP: b.34.13.0 PDB: 3r93_A* 3svm_A* 3qo2_A*
Probab=98.21 E-value=6.4e-08 Score=65.75 Aligned_cols=48 Identities=29% Similarity=0.684 Sum_probs=41.6
Q ss_pred HhhhcccccCCCCeeEEEeeccCC--CCCcccCCCC-C-hHHHHHHHHhhhhh
Q 016433 310 EGVLGKRMGDDGKREFLVKWTDID--EATWEPEENV-D-PDLIKEFEDSQSDG 358 (389)
Q Consensus 310 e~il~~r~~~~g~~~~lvkw~~~~--~~tWe~~~~l-~-~~li~a~~~~~~~~ 358 (389)
+.|++.|. .+|...|++||.|+. ++||||++|| + +++|.+|..++.+.
T Consensus 8 E~Il~~r~-~~g~~~YlVkWkGy~~~~~TWEp~~nl~~~~~li~~f~~~~~~~ 59 (62)
T 3lwe_A 8 EKILDMKT-EGGKVLYKVRWKGYTSDDDTWEPEIHLEDCKEVLLEFRKKIAEN 59 (62)
T ss_dssp EEEEEEEE-ETTEEEEEEEETTSCGGGCEEEEHHHHTTCHHHHHHHHHHHHHH
T ss_pred EEEEEEEE-cCCeEEEEEEEeCCCCcCCCeeeHhHhhccHHHHHHHHHhhHhh
Confidence 78888887 478999999999994 6999999999 3 89999999877654
No 134
>2kvm_A Chromobox protein homolog 7; histone modification, lysine methylation, chromobox, polycom chromatin-binding; HET: MLY; NMR {Mus musculus}
Probab=98.20 E-value=5.3e-07 Score=63.57 Aligned_cols=47 Identities=40% Similarity=0.806 Sum_probs=41.0
Q ss_pred HhhhcccccCCCCeeEEEeeccC--CCCCcccCCCCC-hHHHHHHHHhhhh
Q 016433 310 EGVLGKRMGDDGKREFLVKWTDI--DEATWEPEENVD-PDLIKEFEDSQSD 357 (389)
Q Consensus 310 e~il~~r~~~~g~~~~lvkw~~~--~~~tWe~~~~l~-~~li~a~~~~~~~ 357 (389)
+.|+++|. .+|..+|+|||+++ .++||||+++|. +++|.+|..+...
T Consensus 17 E~Il~~r~-~~g~~~YlVKWkGy~~~~~TWEp~~~L~~~~li~~f~~~~~~ 66 (74)
T 2kvm_A 17 ESIRKKRV-RKGKVEYLVKWKGWPPKYSTWEPEEHILDPRLVMAYEEKEER 66 (74)
T ss_dssp EEEEEEEE-ETTEEEEEEEETTSCGGGCEEEETTTCSCHHHHHHHHHHHHH
T ss_pred EEEEEEEE-eCCcEEEEEEEcCCCCccCeEeeHHHCCCHHHHHHHHHHhhh
Confidence 88999887 47899999999999 458999999997 8899999886544
No 135
>4hae_A CDY-like 2, chromodomain Y-like protein 2; protein binding, structural genomics consortiu; 2.00A {Homo sapiens}
Probab=98.18 E-value=6.7e-09 Score=74.39 Aligned_cols=51 Identities=37% Similarity=0.745 Sum_probs=42.4
Q ss_pred hHHHHHHhhhcccccCCCCeeEEEeeccC--CCCCcccCCCCC--hHHHHHHHHhh
Q 016433 304 LEYAVAEGVLGKRMGDDGKREFLVKWTDI--DEATWEPEENVD--PDLIKEFEDSQ 355 (389)
Q Consensus 304 ~e~~v~e~il~~r~~~~g~~~~lvkw~~~--~~~tWe~~~~l~--~~li~a~~~~~ 355 (389)
.+|.| +.|++.|...+|+..|+|||+|| +++||||++||. +++|.+|...+
T Consensus 22 e~yeV-E~Ild~R~~~~g~~~YlVKWkGy~~~~~TWEp~~nl~~~~~li~~f~~~~ 76 (81)
T 4hae_A 22 DLYEV-ERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLH 76 (81)
T ss_dssp CEEEE-EEEEEEEECTTSCEEEEEEETTCCGGGCEEEEGGGEEECCCCCCTTCSSC
T ss_pred CEEEE-EEEEEeEECCCCeEEEEEEECCCCCCCCeEEeHHHhhhhHHHHHHHHHHc
Confidence 34555 89999998778999999999999 568999999995 78888886644
No 136
>2epb_A Chromodomain-helicase-DNA-binding protein 6; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.14 E-value=6.7e-07 Score=61.74 Aligned_cols=46 Identities=43% Similarity=0.822 Sum_probs=38.3
Q ss_pred Hhhhccccc---CCC--CeeEEEeeccC--CCCCcccCCCCChHHHHHHHHhh
Q 016433 310 EGVLGKRMG---DDG--KREFLVKWTDI--DEATWEPEENVDPDLIKEFEDSQ 355 (389)
Q Consensus 310 e~il~~r~~---~~g--~~~~lvkw~~~--~~~tWe~~~~l~~~li~a~~~~~ 355 (389)
+.|+++|.. .+| ..+||+||+++ ++.|||+++++++++|.+|+..+
T Consensus 15 ErIl~~r~~~~~~~g~~~~eYLVKWkgl~y~e~TWE~~~~l~~~~I~~f~~r~ 67 (68)
T 2epb_A 15 DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQ 67 (68)
T ss_dssp CEEEEEEEEECSSSCCEEEEEEEECTTSCGGGCCEEETTTSCHHHHHHHHHHC
T ss_pred eEEEEEEecccccCCCcceEEEEEEcCCChhcCccccchhcCHHHHHHHHHhh
Confidence 778887743 236 78999999987 78999999999999999998754
No 137
>2ee1_A Chromodomain helicase-DNA-binding protein 4; EC 3.6.1.-, ATP- dependent helicase CHD4, CHD-4, MI-2 autoantigen 218 kDa protein, MI2-beta; NMR {Homo sapiens}
Probab=97.75 E-value=1.3e-05 Score=54.09 Aligned_cols=45 Identities=27% Similarity=0.635 Sum_probs=35.8
Q ss_pred HHhhhcccccCCCCeeEEEeeccC--CCCCcccCCCCChHH---HHHHHH
Q 016433 309 AEGVLGKRMGDDGKREFLVKWTDI--DEATWEPEENVDPDL---IKEFED 353 (389)
Q Consensus 309 ~e~il~~r~~~~g~~~~lvkw~~~--~~~tWe~~~~l~~~l---i~a~~~ 353 (389)
.+.|+++|...+|..+||+||++. ++.|||+++..-+++ |.+|..
T Consensus 14 VeRIi~~r~~~~g~~eYLVKWkgl~y~e~TWE~~~~~~~~~~~~I~~y~~ 63 (64)
T 2ee1_A 14 IHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDYDLFKQSYWN 63 (64)
T ss_dssp CCCCCEEEECTTCCEEEEECCTTSCTTTCEEEETTCCCTTHHHHHHHHHH
T ss_pred EEEEEEEEecCCCCEEEEEEEcCCCcccCcccCCcccCcchHHHHHHHHh
Confidence 378888888778999999999997 789999999432545 777753
No 138
>2b2y_C CHD-1, chromodomain-helicase-DNA-binding protein 1; three stranded antiparallel beta sheet, alpha helix linker, peptide binding protein; 2.35A {Homo sapiens} SCOP: b.34.13.2 PDB: 2b2u_C* 2b2v_C* 2b2t_C* 2b2w_C
Probab=97.48 E-value=2.1e-05 Score=59.33 Aligned_cols=53 Identities=26% Similarity=0.566 Sum_probs=38.5
Q ss_pred hHHHHHHhh------hcccccCCCCeeEEEeeccC--CCCCcccCCCCC-h-----HHHHHHHHhhhhh
Q 016433 304 LEYAVAEGV------LGKRMGDDGKREFLVKWTDI--DEATWEPEENVD-P-----DLIKEFEDSQSDG 358 (389)
Q Consensus 304 ~e~~v~e~i------l~~r~~~~g~~~~lvkw~~~--~~~tWe~~~~l~-~-----~li~a~~~~~~~~ 358 (389)
.+|.| |.+ +++|. ..|..+|++||+|| ..|||||.+||. + .++..|..+..+.
T Consensus 35 ~~Y~V-E~i~Dp~~ildkR~-~~g~~eYlVKWkG~s~~~nTWEp~enL~~~~~~g~kklenY~kk~~e~ 101 (115)
T 2b2y_C 35 TIYAV-EADGDPNAGFEKNK-EPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQET 101 (115)
T ss_dssp SHHHH-HHHCBTTTTCCTTS-SSCEEEEEEEETTSCGGGCEEECHHHHHHHTCBCTHHHHHHHC-----
T ss_pred ceEEE-eecCCcccccccce-eCCcEEEEEEECCCCchhcccCCHHHcCCccchHHHHHHHHHHHHHHH
Confidence 45777 554 88887 68999999999999 579999999985 3 3678887654433
No 139
>2h1e_A Chromo domain protein 1; CHD1, tandem chromodomains, three-stranded ANT B-sheet, hydrolase; 2.20A {Saccharomyces cerevisiae} PDB: 2dy7_A 2dy8_A
Probab=95.91 E-value=0.00034 Score=57.99 Aligned_cols=48 Identities=31% Similarity=0.745 Sum_probs=38.4
Q ss_pred HHHHHhhhcccc----cCCCCeeEEEeeccC--CCCCcccCCCCC---hHHHHHHHH
Q 016433 306 YAVAEGVLGKRM----GDDGKREFLVKWTDI--DEATWEPEENVD---PDLIKEFED 353 (389)
Q Consensus 306 ~~v~e~il~~r~----~~~g~~~~lvkw~~~--~~~tWe~~~~l~---~~li~a~~~ 353 (389)
|...+.|++.+. ..+|..+||+||++. ++.|||+++++. +++|.+|..
T Consensus 120 ~~~VErIi~~r~~~~~~~~~~~~YLVKWkgl~y~e~TWE~~~~~~~~~~~~I~~y~~ 176 (177)
T 2h1e_A 120 FHVPERIIDSQRASLEDGTSQLQYLVKWRRLNYDEATWENATDIVKLAPEQVKHFQK 176 (177)
T ss_dssp TTSEEEEEEEEEEECTTSCEEEEEEEEETTSCSTTCEEEEHHHHHHHCHHHHHHHTC
T ss_pred cceeEEEEEEeeecccCCCCcEEEEEEeCCCCcccccccChHHhhhhHHHHHHHHHh
Confidence 444478888886 457899999999987 789999999874 678888754
No 140
>2b2y_A CHD-1, chromodomain-helicase-DNA-binding protein 1; three stranded antiparallel beta sheet, alpha helix linker, peptide binding protein; 2.35A {Homo sapiens} SCOP: b.34.13.2 b.34.13.2 PDB: 2b2u_A* 2b2v_A* 2b2w_A 2b2t_A*
Probab=95.87 E-value=0.00054 Score=57.30 Aligned_cols=50 Identities=18% Similarity=0.506 Sum_probs=39.5
Q ss_pred HHHHHhhhccccc--CCCCeeEEEeeccC--CCCCcccCCCCC---hHHHHHHHHhh
Q 016433 306 YAVAEGVLGKRMG--DDGKREFLVKWTDI--DEATWEPEENVD---PDLIKEFEDSQ 355 (389)
Q Consensus 306 ~~v~e~il~~r~~--~~g~~~~lvkw~~~--~~~tWe~~~~l~---~~li~a~~~~~ 355 (389)
|...+.|++.+.. .+|...||+||++. ++.|||+++++. +++|.+|..++
T Consensus 130 ~~~VErIi~~r~~~~~~g~~~yLVKWkgl~Y~e~TWE~~~~i~~~~~~~I~~f~~R~ 186 (187)
T 2b2y_A 130 YQIVGRIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALISKKFQACIDEYFSRK 186 (187)
T ss_dssp TTSEEEEEEEEEEECTTSCEEEEEEETTSCGGGCEEECHHHHHHHHHHHHHHHHHTT
T ss_pred cceeEEEEEeeeecCCCCcEEEEEEECCCChhhCcccchhhhhhhHHHHHHHHHhhc
Confidence 3334778887764 57899999999997 789999999874 68888887654
No 141
>2b2y_A CHD-1, chromodomain-helicase-DNA-binding protein 1; three stranded antiparallel beta sheet, alpha helix linker, peptide binding protein; 2.35A {Homo sapiens} SCOP: b.34.13.2 b.34.13.2 PDB: 2b2u_A* 2b2v_A* 2b2w_A 2b2t_A*
Probab=94.55 E-value=0.0084 Score=50.03 Aligned_cols=51 Identities=27% Similarity=0.617 Sum_probs=38.1
Q ss_pred HHHHHHhh------hcccccCCCCeeEEEeeccCC--CCCcccCCCCC------hHHHHHHHHhhhh
Q 016433 305 EYAVAEGV------LGKRMGDDGKREFLVKWTDID--EATWEPEENVD------PDLIKEFEDSQSD 357 (389)
Q Consensus 305 e~~v~e~i------l~~r~~~~g~~~~lvkw~~~~--~~tWe~~~~l~------~~li~a~~~~~~~ 357 (389)
+|.+ +.+ +++|. ..|..+||+||+|++ .+||+++++|. ...+..|..+...
T Consensus 36 ~y~V-E~i~d~~~~ld~r~-~~~~~eYlVKWkg~s~~h~tWe~~~~L~~~~~~~~~kl~nf~kk~~~ 100 (187)
T 2b2y_A 36 IYAV-EADGDPNAGFEKNK-EPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQE 100 (187)
T ss_dssp HHHH-HHHCCTTTTCC-CC-SCCEEEEEEEETTSCGGGCEEECHHHHHHTTCBCHHHHHHHHHHHHH
T ss_pred eEEe-eccCCcccccCccc-cCCcEEEEEEECCCCcccCeeCCHHHhCccchhhHHHHHHHHHhhhc
Confidence 4556 555 57666 578899999999995 79999999984 3458888776553
No 142
>3mwy_W Chromo domain-containing protein 1; SWI2/SNF2 ATPase, double chromodomains, hydrolase; HET: ATG; 3.70A {Saccharomyces cerevisiae}
Probab=91.93 E-value=0.0064 Score=62.96 Aligned_cols=39 Identities=33% Similarity=0.629 Sum_probs=31.9
Q ss_pred HHHHHHhhhcccccC------------------CCCeeEEEeeccCC--CCCcccCCCCC
Q 016433 305 EYAVAEGVLGKRMGD------------------DGKREFLVKWTDID--EATWEPEENVD 344 (389)
Q Consensus 305 e~~v~e~il~~r~~~------------------~g~~~~lvkw~~~~--~~tWe~~~~l~ 344 (389)
++.+ ++|+++|... +|..+|++||+|++ ++|||++++|.
T Consensus 37 ~~~v-e~vl~~r~~~~~~~~~~~~~~~~~~~~~~~~~eylvKWkg~s~~hntWe~~e~L~ 95 (800)
T 3mwy_W 37 FHGI-DIVINHRLKTSLEEGKVLEKTVPDLNNCKENYEFLIKWTDESHLHNTWETYESIG 95 (800)
T ss_dssp CCBC-SEEEEEECCCC--------CCSCCHHHHHHHCEEEEECSSSCTTSCEEECHHHHC
T ss_pred CCch-hhhccccccccccCCccccccCcCcCCCcCceEEEEEeCCcceeeccccCHHHHh
Confidence 3455 8899988841 67789999999984 79999999985
No 143
>3kup_A Chromobox protein homolog 3; chromo shadow domain, structural genomics consortium, SGC, acetylation, chromatin regulator, nucleus, phosphoprotein; 1.77A {Homo sapiens} SCOP: b.34.13.2 PDB: 1dz1_A
Probab=90.56 E-value=0.047 Score=36.84 Aligned_cols=44 Identities=30% Similarity=0.598 Sum_probs=34.6
Q ss_pred HhhhcccccCCCCeeEEEeeccCCCCCcccCCCCC---hHHHHHHHHh
Q 016433 310 EGVLGKRMGDDGKREFLVKWTDIDEATWEPEENVD---PDLIKEFEDS 354 (389)
Q Consensus 310 e~il~~r~~~~g~~~~lvkw~~~~~~tWe~~~~l~---~~li~a~~~~ 354 (389)
|.|++... .+|..-+++||++.++..|.+..... |.++.+|-++
T Consensus 16 ekI~g~~~-~~Gel~fLvKWKg~~~~d~Vpa~e~n~~~PqlVI~fYE~ 62 (65)
T 3kup_A 16 ERIIGATD-SSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEE 62 (65)
T ss_dssp EEEEEEEC-TTSSCEEEEEETTCSCCEEEEHHHHHHHCHHHHHHHHHH
T ss_pred eEEeeEEc-CCCcEEEEEEECCCChhheEEHHHHHhhChHHHHHHHHH
Confidence 67777654 58899999999999888788866653 8888888654
No 144
>2h1e_A Chromo domain protein 1; CHD1, tandem chromodomains, three-stranded ANT B-sheet, hydrolase; 2.20A {Saccharomyces cerevisiae} PDB: 2dy7_A 2dy8_A
Probab=90.12 E-value=0.047 Score=45.02 Aligned_cols=36 Identities=33% Similarity=0.645 Sum_probs=29.7
Q ss_pred CCeeEEEeeccCC--CCCcccCCCCC--hHH--HHHHHHhhh
Q 016433 321 GKREFLVKWTDID--EATWEPEENVD--PDL--IKEFEDSQS 356 (389)
Q Consensus 321 g~~~~lvkw~~~~--~~tWe~~~~l~--~~l--i~a~~~~~~ 356 (389)
+..+|+|||++++ .+||+++++|. +.+ +..|..+..
T Consensus 45 ~~~EYlVKWKg~Sy~HnTWe~ee~L~~~~glkKl~nf~kk~~ 86 (177)
T 2h1e_A 45 ENYEFLIKWTDESHLHNTWETYESIGQVRGLKRLDNYCKQFI 86 (177)
T ss_dssp HHEEEEEEETTSCGGGCEEECHHHHCSCTTHHHHHHHHHHHT
T ss_pred CceEEEEEECCCccccCeecCHHHHhhchHHHHHHHHHHHhh
Confidence 4578999999995 79999999997 677 778877654
No 145
>2fmm_A Chromobox protein homolog 1; ENT domain, chromo shadow domain, EMSY protein, heterochroma protein 1, transcription; 1.80A {Homo sapiens} SCOP: b.34.13.2 PDB: 1s4z_A
Probab=89.02 E-value=0.054 Score=37.59 Aligned_cols=45 Identities=29% Similarity=0.644 Sum_probs=37.4
Q ss_pred HhhhcccccCCCCeeEEEeeccCCCCCcccCCCCC---hHHHHHHHHhh
Q 016433 310 EGVLGKRMGDDGKREFLVKWTDIDEATWEPEENVD---PDLIKEFEDSQ 355 (389)
Q Consensus 310 e~il~~r~~~~g~~~~lvkw~~~~~~tWe~~~~l~---~~li~a~~~~~ 355 (389)
+.|++... .+|..-+++||++.+..+|.+...+. |.++.+|-.++
T Consensus 19 ekI~g~~~-~~Gel~fLvkWkg~d~~dlVpa~~a~~k~Pq~VI~FYE~~ 66 (74)
T 2fmm_A 19 ERIIGATD-SSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEER 66 (74)
T ss_dssp EEEEEEEE-ETTEEEEEEEETTCSCCEEEEHHHHHHHCHHHHHHHHHTT
T ss_pred eEEEEEEc-CCCcEEEEEEECCCCcccEEEHHHHhhhChHHHHHHHHHh
Confidence 67777765 58889999999999999999999874 88999887643
No 146
>3i3c_A Chromobox protein homolog 5; CBX5, chromo shadow domain, structural genomics, structural consortium, SGC, centromere, nucleus, phosphoprotein; 2.48A {Homo sapiens} SCOP: b.34.13.2
Probab=86.22 E-value=0.067 Score=37.10 Aligned_cols=44 Identities=30% Similarity=0.573 Sum_probs=32.4
Q ss_pred HhhhcccccCCCCeeEEEeeccCCCCCcccCCCCC---hHHHHHHHHh
Q 016433 310 EGVLGKRMGDDGKREFLVKWTDIDEATWEPEENVD---PDLIKEFEDS 354 (389)
Q Consensus 310 e~il~~r~~~~g~~~~lvkw~~~~~~tWe~~~~l~---~~li~a~~~~ 354 (389)
+.|++... .+|..-+++||++.++..|.+..... |.++.+|-++
T Consensus 26 EkIlg~t~-~~Gel~fLVKWKg~~e~dlVpa~ean~k~PqlVI~FYEe 72 (75)
T 3i3c_A 26 EKIIGATD-SCGDLMFLMKWKDTDEADLVLAKEANVKCPQIVIAFYEE 72 (75)
T ss_dssp EEEEEEEC----CCEEEEEETTSSCEEEEEHHHHHHHCHHHHHHHHTC
T ss_pred eEEeeEEc-cCCcEEEEEEECCCChhceEEHHHHhhhChHHHHHHHHH
Confidence 67777654 57899999999999888888866653 8888888653
No 147
>3q6s_A Chromobox protein homolog 1; incenp, heterochromatin, centromere, cell cycle; 1.93A {Homo sapiens} SCOP: b.34.13.2
Probab=84.11 E-value=0.15 Score=35.66 Aligned_cols=45 Identities=29% Similarity=0.644 Sum_probs=34.9
Q ss_pred HhhhcccccCCCCeeEEEeeccCCCCCcccCCCCC---hHHHHHHHHhh
Q 016433 310 EGVLGKRMGDDGKREFLVKWTDIDEATWEPEENVD---PDLIKEFEDSQ 355 (389)
Q Consensus 310 e~il~~r~~~~g~~~~lvkw~~~~~~tWe~~~~l~---~~li~a~~~~~ 355 (389)
+.|++... .+|..-+++||++.++..|.+...+. |.++.+|-.++
T Consensus 13 EkI~g~~~-~~Gel~fLvKWKg~~~~dlVpa~ean~k~PqlVI~FYE~~ 60 (78)
T 3q6s_A 13 ERIIGATD-SSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEER 60 (78)
T ss_dssp EEEEEEEC-TTSSCEEEEEETTCSCEEEEEHHHHHHHSHHHHHHHHHTT
T ss_pred eEEeeEEc-CCCcEEEEEEECCCChhheEeHHHHHhhChHHHHHHHHHh
Confidence 66776654 57889999999999888788866653 88988886643
No 148
>3p7j_A Heterochromatin protein 1; chromo shadow domain, gene silenc epigenetics, transcription; 2.30A {Drosophila melanogaster}
Probab=76.55 E-value=0.38 Score=34.26 Aligned_cols=44 Identities=25% Similarity=0.600 Sum_probs=33.3
Q ss_pred HhhhcccccCCCCeeEEEeeccCCCCCcccCCCCC---hHHHHHHHHh
Q 016433 310 EGVLGKRMGDDGKREFLVKWTDIDEATWEPEENVD---PDLIKEFEDS 354 (389)
Q Consensus 310 e~il~~r~~~~g~~~~lvkw~~~~~~tWe~~~~l~---~~li~a~~~~ 354 (389)
+.|++... .+|..-||+||++.++..+.+..... |.++.+|-++
T Consensus 29 EkIlgat~-~~Gel~fLVKWKg~~e~DlVpa~ean~k~PqlVI~FYEe 75 (87)
T 3p7j_A 29 EKILGASD-NNGRLTFLIQFKGVDQAEMVPSSVANEKIPRMVIHFYEE 75 (87)
T ss_dssp EEEEEEEE-ETTEEEEEEEETTCSSCEEEEHHHHHHHCHHHHHHHHHH
T ss_pred eEEeeEEc-cCCcEEEEEEECCCCccceEeHHHHhhhChHHHHHHHHH
Confidence 67776654 57889999999999877666665553 8899988553
No 149
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=28.48 E-value=37 Score=19.72 Aligned_cols=19 Identities=21% Similarity=0.174 Sum_probs=14.2
Q ss_pred HHHHHHHcCCHHHHHHHHH
Q 016433 115 PWWTAAKKADDAALKEIIE 133 (389)
Q Consensus 115 ~L~~A~~~g~~~~v~~Ll~ 133 (389)
-+..||..|+.+.++.|-.
T Consensus 16 qiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHH
Confidence 4577888888888877743
No 150
>2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.00 E-value=1.8e+02 Score=19.58 Aligned_cols=40 Identities=20% Similarity=0.283 Sum_probs=28.4
Q ss_pred cHHHHHHHHHcccChHHHHHHHHHcCC--h-hHHHHHHhccCC
Q 016433 242 LEAVIRNLEEAVFEYAEVQEILEKRGK--G-DQLEYLVKWRDG 281 (389)
Q Consensus 242 ~~~~v~~Ll~~g~~~~~~~~~a~~~g~--~-~~~~~L~~~~~~ 281 (389)
..+.|+.|++.|+........+...++ . ..+++|+.+...
T Consensus 9 ~e~~v~~L~~MGF~~~~a~~AL~~t~n~~ve~A~ewL~~~~~d 51 (74)
T 2dag_A 9 DESVIIQLVEMGFPMDACRKAVYYTGNSGAEAAMNWVMSHMDD 51 (74)
T ss_dssp CHHHHHHHHHHSCCHHHHHHHHHHHTSCCHHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHcCCCHHHHHHHHHHhCCCCHHHHHHHHHhCCCC
Confidence 567889999999998777666555542 3 368888876543
No 151
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=21.02 E-value=2.3e+02 Score=26.29 Aligned_cols=50 Identities=16% Similarity=0.189 Sum_probs=38.3
Q ss_pred HHHHcCCHHHHHHHHHhCCCCCcccc--------------CCCCCcHHHHHHHcCCHHHHHHHHhc
Q 016433 118 TAAKKADDAALKEIIEAGDGRDVDAV--------------DNDGRTALLFVSGLGSEACVRVLAEA 169 (389)
Q Consensus 118 ~A~~~g~~~~v~~Ll~~g~~~~~~~~--------------d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 169 (389)
..+..|+...|+..+..| .+++-+ -.-|.|.+|+|++..+.+++..|+..
T Consensus 28 ~gv~e~~~~~ve~y~~~g--g~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSG--GDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHHHTCHHHHHHHHTTT--CCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcC--CchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 345678999999988887 444321 23589999999999999999998863
Done!