Your job contains 1 sequence.
>016434
MAWWSSASASSTFNSSFLLRSSLSSYSNKKLSSNHVAHAPPSLFSPYITINSFKKRCIIV
TNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAV
LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI
FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVL
GVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTHMVIGGLPLMVISVLNHDPVY
GESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLY
LGETFSPLQLVGAAVTVVAIYLVNFRGSV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016434
(389 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2076954 - symbol:AT3G02690 species:3702 "Arabi... 664 1.4e-103 2
UNIPROTKB|Q3Z7M8 - symbol:DET1056 "Membrane protein, puta... 188 5.6e-13 1
TIGR_CMR|DET_1056 - symbol:DET_1056 "membrane protein, pu... 188 5.6e-13 1
TIGR_CMR|SPO_3584 - symbol:SPO_3584 "membrane protein, dr... 112 3.8e-10 2
UNIPROTKB|Q5LM21 - symbol:SPO3743 "Membrane protein, puta... 148 5.0e-08 1
TIGR_CMR|SPO_3743 - symbol:SPO_3743 "membrane protein, pu... 148 5.0e-08 1
UNIPROTKB|P0AA70 - symbol:yedA "putative membrane transpo... 144 1.7e-07 1
TIGR_CMR|BA_2672 - symbol:BA_2672 "transporter, EamA fami... 141 3.7e-07 1
TIGR_CMR|BA_2736 - symbol:BA_2736 "transporter, EamA fami... 119 1.2e-06 2
UNIPROTKB|Q8E8X4 - symbol:SO_4527 "10 TMS drug/metabolite... 99 2.2e-06 2
TIGR_CMR|SO_4527 - symbol:SO_4527 "integral membrane doma... 99 2.2e-06 2
UNIPROTKB|Q3AAZ7 - symbol:CHY_1867 "Putative membrane pro... 128 1.1e-05 1
TIGR_CMR|CHY_1867 - symbol:CHY_1867 "putative membrane pr... 128 1.1e-05 1
UNIPROTKB|Q4KB90 - symbol:PFL_3388 "Putative membrane pro... 101 3.3e-05 2
UNIPROTKB|Q47X10 - symbol:CPS_4003 "Membrane protein" spe... 92 7.6e-05 2
TIGR_CMR|CPS_4003 - symbol:CPS_4003 "membrane protein" sp... 92 7.6e-05 2
TIGR_CMR|BA_3061 - symbol:BA_3061 "transporter, EamA fami... 120 9.4e-05 1
UNIPROTKB|P31437 - symbol:yicL "inhibitor of heme biosynt... 82 0.00016 2
TIGR_CMR|BA_1915 - symbol:BA_1915 "transporter, EamA fami... 91 0.00037 2
UNIPROTKB|Q88B23 - symbol:PSPTO_0210 "Membrane protein, p... 106 0.00043 2
TIGR_CMR|BA_0829 - symbol:BA_0829 "transporter, EamA fami... 114 0.00045 1
UNIPROTKB|P0ABT8 - symbol:yijE "predicted permease" speci... 89 0.00050 2
>TAIR|locus:2076954 [details] [associations]
symbol:AT3G02690 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;ISS] InterPro:IPR000620 Pfam:PF00892 GO:GO:0009507
EMBL:AC021640 EMBL:CP002686 GO:GO:0016020 eggNOG:COG0697
EMBL:AF428434 EMBL:AY045633 EMBL:AY133570 EMBL:AY087405
IPI:IPI00547917 RefSeq:NP_566180.1 UniGene:At.18824
UniGene:At.53162 UniGene:At.75116 IntAct:Q93V85 STRING:Q93V85
PRIDE:Q93V85 EnsemblPlants:AT3G02690.1 GeneID:821274
KEGG:ath:AT3G02690 GeneFarm:3094 TAIR:At3g02690
HOGENOM:HOG000275238 InParanoid:Q93V85 OMA:NGQHVAL PhylomeDB:Q93V85
ProtClustDB:CLSN2688009 Genevestigator:Q93V85 Uniprot:Q93V85
Length = 417
Score = 664 (238.8 bits), Expect = 1.4e-103, Sum P(2) = 1.4e-103
Identities = 140/224 (62%), Positives = 159/224 (70%)
Query: 61 TNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAV 120
+N +T ++ SSS+VDCV G+DVEC+ + D EE + G+ G LEW V
Sbjct: 73 SNNSTEETESSSSSSSVDCVGMGSDVECVNNGED-EENRSSGILSGGE----GTFLEWTV 127
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
L+SPFFFWGTAMVAMKEVLP G FFVAAFRLIPAGLLL+ FA +GR LP G NAW SI
Sbjct: 128 LISPFFFWGTAMVAMKEVLPITGPFFVAAFRLIPAGLLLVAFAVYKGRPLPEGINAWFSI 187
Query: 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXX 240
LFALVDA+CFQGFLAQGLQRTSAGLGSVIIDSQPL+VAVLA+ LFGES
Sbjct: 188 ALFALVDATCFQGFLAQGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLL 247
Query: 241 XXXXXXXXEAPAF--DESNSSLWGSGEWWMLLAAQSMAVGTHMV 282
E P+ D +N SLWGSGEWWMLLAAQSMA+GT MV
Sbjct: 248 GVAGLLLLEVPSVTSDGNNFSLWGSGEWWMLLAAQSMAIGTVMV 291
Score = 382 (139.5 bits), Expect = 1.4e-103, Sum P(2) = 1.4e-103
Identities = 73/111 (65%), Positives = 87/111 (78%)
Query: 275 MAVGTHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXX 334
MA G HMVIGGLPL+ ISV+NHDPV+ S+++L+++D++ALLYTSIFGSA+SYGVYFY
Sbjct: 302 MATGWHMVIGGLPLLAISVINHDPVFNGSLQDLSTNDVIALLYTSIFGSAVSYGVYFYSA 361
Query: 335 XXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 385
PMFASIFG+LYL ETFS LQLVGAAVT+VAIYLVNF
Sbjct: 362 TKGSLTKLSSLTFLTPMFASIFGYLYLNETFSSLQLVGAAVTLVAIYLVNF 412
>UNIPROTKB|Q3Z7M8 [details] [associations]
symbol:DET1056 "Membrane protein, putative" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0697 RefSeq:YP_181771.1
STRING:Q3Z7M8 GeneID:3229634 KEGG:det:DET1056 PATRIC:21609157
HOGENOM:HOG000184105 OMA:ITRMRLP ProtClustDB:CLSK837118
BioCyc:DETH243164:GJNF-1057-MONOMER Uniprot:Q3Z7M8
Length = 287
Score = 188 (71.2 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 68/284 (23%), Positives = 114/284 (40%)
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
L+ FW +A A++ L +A R + A L L+ +A +LP + +I
Sbjct: 9 LIFTILFWSSAFAAIRVSLADYSPSHLALLRFLVASLALVIYALITRMRLPDKRDL-PAI 67
Query: 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXX 240
FL L+ S + L G + +AG S+II S P+ +LA + +
Sbjct: 68 FLLGLIGISLYHFALNYGEKTVTAGAASLIIASAPIFSVLLARFFYKDKLTPAGWLGILL 127
Query: 241 XXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAV-----------------GTHMVI 283
E + + +W+LLAA ++ T+ +
Sbjct: 128 SFGGIAVI---TLGEGQTLSFEPHAFWVLLAALFTSIYIVFQRPLLKKYSGFEFSTYAIW 184
Query: 284 GGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXX 343
G L+++ P + + E +S LA++Y IF +AISY +Y Y
Sbjct: 185 AGTLLLMVGA----PGLLKEISEAPASSTLAVVYLGIFPTAISYLLYSYALSKARISQVI 240
Query: 344 XXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 387
P+FA FL+LGE +P+ L+G + + + LVN G
Sbjct: 241 SFLYLNPVFAIGIAFLWLGEIPAPISLLGGLLALAGVILVNRYG 284
>TIGR_CMR|DET_1056 [details] [associations]
symbol:DET_1056 "membrane protein, putative"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0697 RefSeq:YP_181771.1
STRING:Q3Z7M8 GeneID:3229634 KEGG:det:DET1056 PATRIC:21609157
HOGENOM:HOG000184105 OMA:ITRMRLP ProtClustDB:CLSK837118
BioCyc:DETH243164:GJNF-1057-MONOMER Uniprot:Q3Z7M8
Length = 287
Score = 188 (71.2 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 68/284 (23%), Positives = 114/284 (40%)
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
L+ FW +A A++ L +A R + A L L+ +A +LP + +I
Sbjct: 9 LIFTILFWSSAFAAIRVSLADYSPSHLALLRFLVASLALVIYALITRMRLPDKRDL-PAI 67
Query: 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXX 240
FL L+ S + L G + +AG S+II S P+ +LA + +
Sbjct: 68 FLLGLIGISLYHFALNYGEKTVTAGAASLIIASAPIFSVLLARFFYKDKLTPAGWLGILL 127
Query: 241 XXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAV-----------------GTHMVI 283
E + + +W+LLAA ++ T+ +
Sbjct: 128 SFGGIAVI---TLGEGQTLSFEPHAFWVLLAALFTSIYIVFQRPLLKKYSGFEFSTYAIW 184
Query: 284 GGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXX 343
G L+++ P + + E +S LA++Y IF +AISY +Y Y
Sbjct: 185 AGTLLLMVGA----PGLLKEISEAPASSTLAVVYLGIFPTAISYLLYSYALSKARISQVI 240
Query: 344 XXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 387
P+FA FL+LGE +P+ L+G + + + LVN G
Sbjct: 241 SFLYLNPVFAIGIAFLWLGEIPAPISLLGGLLALAGVILVNRYG 284
>TIGR_CMR|SPO_3584 [details] [associations]
symbol:SPO_3584 "membrane protein, drug/metabolite
transporter (DMT) family" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006810
"transport" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000031
GenomeReviews:CP000031_GR RefSeq:YP_168779.1
ProteinModelPortal:Q5LMH9 GeneID:3193360 KEGG:sil:SPO3584
PATRIC:23380645 HOGENOM:HOG000275237 KO:K15269 OMA:NLTFTAW
Uniprot:Q5LMH9
Length = 306
Score = 112 (44.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 30/101 (29%), Positives = 46/101 (45%)
Query: 128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVS-IFLFALV 186
WG++ + LP F VA R +PAGLLL+ RKLP W+ + + +
Sbjct: 21 WGSSYFVTTQFLPAHSPFVVALLRALPAGLLLMLLV----RKLPP--RGWIGRLLILGAL 74
Query: 187 DASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFG 227
+ + F L R G+ + + QPL V L+A+ G
Sbjct: 75 NFAVFWSLLFVAAYRLPGGVAATVGAVQPLLVVFLSAVALG 115
Score = 99 (39.9 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 21/76 (27%), Positives = 40/76 (52%)
Query: 307 LTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFS 366
L+ +++ AL + + G A++Y ++F P+ A I G+L LGE S
Sbjct: 204 LSLTNLAALAWLGLIGGALTYILWFRGLARIEPAAVSLLGILSPLTAVILGWLALGEALS 263
Query: 367 PLQLVGAAVTVVAIYL 382
P+Q +GA + + A+++
Sbjct: 264 PVQGLGAVIVLGAVWI 279
>UNIPROTKB|Q5LM21 [details] [associations]
symbol:SPO3743 "Membrane protein, putative" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000031
GenomeReviews:CP000031_GR RefSeq:YP_168937.1 GeneID:3194042
KEGG:sil:SPO3743 PATRIC:23380979 HOGENOM:HOG000138901 OMA:IMGARIT
ProtClustDB:CLSK934262 Uniprot:Q5LM21
Length = 292
Score = 148 (57.2 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 59/270 (21%), Positives = 104/270 (38%)
Query: 126 FFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFAL 185
F W +A + + ++ A F A R + +GLL + A + G+ N W + +F +
Sbjct: 14 FMWSSAFSSARIIVADASPLFSLACRFLISGLLGVIIARAMGQTWRLTRNQWKATIVFGI 73
Query: 186 VDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXXXXXXX 245
+ + G +Q A + ++I + PL VA+ + LFGE
Sbjct: 74 CQNALYLGLNFYAMQTVEASVAAIIASTMPLLVALASWGLFGERLPALGIAGLLAGFLGV 133
Query: 246 XXXEAPAFDESNSSLWG---SGEWWMLLAAQSMAV------GTHMVIGGLPLMVISVLNH 296
+ L+G G + LAA ++A+ G M++ GL ++V S +
Sbjct: 134 ALIMGARIG-AGVDLFGVLLCGLGALALAAATLALRGATSGGNFMMVVGLQMLVGSAVLF 192
Query: 297 --DPVYGESVKELTSSDI-LALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFA 353
P++ E+V + + LA YT++ + V+ P+F
Sbjct: 193 LATPIF-ETVHVTPTLPLALAFAYTTLVPGLTATFVWVLLLNRIGAIRAATFHFLNPVFG 251
Query: 354 SIFGFLYLGETFSPLQLVGAAVTVVAIYLV 383
LGE L +G A+T I V
Sbjct: 252 VAIAAALLGERLGALDAIGVAITTAGILAV 281
>TIGR_CMR|SPO_3743 [details] [associations]
symbol:SPO_3743 "membrane protein, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000031
GenomeReviews:CP000031_GR RefSeq:YP_168937.1 GeneID:3194042
KEGG:sil:SPO3743 PATRIC:23380979 HOGENOM:HOG000138901 OMA:IMGARIT
ProtClustDB:CLSK934262 Uniprot:Q5LM21
Length = 292
Score = 148 (57.2 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 59/270 (21%), Positives = 104/270 (38%)
Query: 126 FFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFAL 185
F W +A + + ++ A F A R + +GLL + A + G+ N W + +F +
Sbjct: 14 FMWSSAFSSARIIVADASPLFSLACRFLISGLLGVIIARAMGQTWRLTRNQWKATIVFGI 73
Query: 186 VDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXXXXXXX 245
+ + G +Q A + ++I + PL VA+ + LFGE
Sbjct: 74 CQNALYLGLNFYAMQTVEASVAAIIASTMPLLVALASWGLFGERLPALGIAGLLAGFLGV 133
Query: 246 XXXEAPAFDESNSSLWG---SGEWWMLLAAQSMAV------GTHMVIGGLPLMVISVLNH 296
+ L+G G + LAA ++A+ G M++ GL ++V S +
Sbjct: 134 ALIMGARIG-AGVDLFGVLLCGLGALALAAATLALRGATSGGNFMMVVGLQMLVGSAVLF 192
Query: 297 --DPVYGESVKELTSSDI-LALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFA 353
P++ E+V + + LA YT++ + V+ P+F
Sbjct: 193 LATPIF-ETVHVTPTLPLALAFAYTTLVPGLTATFVWVLLLNRIGAIRAATFHFLNPVFG 251
Query: 354 SIFGFLYLGETFSPLQLVGAAVTVVAIYLV 383
LGE L +G A+T I V
Sbjct: 252 VAIAAALLGERLGALDAIGVAITTAGILAV 281
>UNIPROTKB|P0AA70 [details] [associations]
symbol:yedA "putative membrane transport protein"
species:83333 "Escherichia coli K-12" [GO:0055085 "transmembrane
transport" evidence=IMP;RCA] [GO:0022857 "transmembrane transporter
activity" evidence=IMP;RCA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA;RCA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR000620
InterPro:IPR004779 Pfam:PF00892 GO:GO:0016021 GO:GO:0005886
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG0697 GO:GO:0022857 EMBL:X13330
PIR:JS0266 RefSeq:NP_416468.1 RefSeq:YP_490212.1
ProteinModelPortal:P0AA70 EnsemblBacteria:EBESCT00000001675
EnsemblBacteria:EBESCT00000014501 GeneID:12932061 GeneID:946461
KEGG:ecj:Y75_p1928 KEGG:eco:b1959 PATRIC:32119247 EchoBASE:EB1131
EcoGene:EG11141 HOGENOM:HOG000258419 OMA:AYMALVQ
ProtClustDB:PRK11272 BioCyc:EcoCyc:EG11141-MONOMER
BioCyc:ECOL316407:JW1942-MONOMER Genevestigator:P0AA70
TIGRFAMs:TIGR00950 Uniprot:P0AA70
Length = 306
Score = 144 (55.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 66/290 (22%), Positives = 109/290 (37%)
Query: 110 MELGMLLE-WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGR 168
M LL + L + + WG+ ++ + +A R + AG+LL+ F +G
Sbjct: 1 MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLLAFLLLRGH 60
Query: 169 KLPSGFNAWVSIFLFALVDASCFQGFLAQGL-QRTSAGLGSVIIDSQPLSVAVLAALLFG 227
KLP ++ L L+ + G + Q +G+ +V++ + PL + L FG
Sbjct: 61 KLPP-LRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FG 118
Query: 228 ESXXXXXXXXXXXXXXXXXXXEAPAFDESN----------SSLWGSGEWW---MLLAAQS 274
+ N S W G + + L
Sbjct: 119 IKTRKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSISWAFGSVYGSRITLPVGM 178
Query: 275 MAVGTHMVIGGLPLMVISVLNHDPVYGESVKELTS-SDILALLYTSIFGSAISYGVYFYX 333
MA M+ G+ LM+ S+ + GE + L S S LA+ Y ++FGS I+ Y Y
Sbjct: 179 MAGAIEMLAAGVVLMIASM-----IAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYL 233
Query: 334 XXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLV 383
P+ A + G GET S ++ + V V A+ LV
Sbjct: 234 IRNVSPALATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLV 283
>TIGR_CMR|BA_2672 [details] [associations]
symbol:BA_2672 "transporter, EamA family" species:198094
"Bacillus anthracis str. Ames" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000184105 RefSeq:NP_845031.1 RefSeq:YP_019313.1
RefSeq:YP_028749.1 DNASU:1086514 EnsemblBacteria:EBBACT00000009562
EnsemblBacteria:EBBACT00000017603 EnsemblBacteria:EBBACT00000020207
GeneID:1086514 GeneID:2819334 GeneID:2848829 KEGG:ban:BA_2672
KEGG:bar:GBAA_2672 KEGG:bat:BAS2489 OMA:FILNENI
ProtClustDB:CLSK886770 BioCyc:BANT260799:GJAJ-2554-MONOMER
BioCyc:BANT261594:GJ7F-2647-MONOMER Uniprot:Q81PX0
Length = 304
Score = 141 (54.7 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 52/270 (19%), Positives = 117/270 (43%)
Query: 128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVD 187
WG+A A++ L + RL+ A ++L+ F+ +LP +IF+F +
Sbjct: 21 WGSAFPAIRMGLESYTPEHLTLLRLLIASVILLLFSFIYKLRLPD-LKDIPAIFIFGALG 79
Query: 188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXXXXXXXXX 247
+ + L G + +AG S+I+ P+ A+ A++ E
Sbjct: 80 FTFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFMNEKMKLNGWIGGVISFIGIAF 139
Query: 248 XEAPAFDESNSSLWGSGEWWMLLAAQSMAV-----GTHMV-IGGLPLMVISVLNHDP--- 298
+F + ++ SG ++LLAA S ++ +++ G LP + ++L+
Sbjct: 140 I---SFSQGDAIQLNSGALFILLAAISESLFFVFQSSYLKKYGFLPFTIYTILSSTVCML 196
Query: 299 VYGESV-KELTSSDI---LALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFAS 354
++ + +E+ ++ + L+++Y +F + + Y Y P+ A
Sbjct: 197 IFLPGMYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSLYLTPITAC 256
Query: 355 IFGFLYLGETFSPLQLVGAAVTVVAIYLVN 384
+++LGE + + ++G +T++ I +V+
Sbjct: 257 FVAWIWLGEVPTLVSIIGGGITILGIVIVH 286
>TIGR_CMR|BA_2736 [details] [associations]
symbol:BA_2736 "transporter, EamA family" species:198094
"Bacillus anthracis str. Ames" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000258419 RefSeq:NP_845086.1 RefSeq:YP_019376.1
RefSeq:YP_028809.1 DNASU:1087282 EnsemblBacteria:EBBACT00000011317
EnsemblBacteria:EBBACT00000018593 EnsemblBacteria:EBBACT00000023481
GeneID:1087282 GeneID:2815576 GeneID:2848087 KEGG:ban:BA_2736
KEGG:bar:GBAA_2736 KEGG:bat:BAS2549 OMA:PHIFSKR
ProtClustDB:CLSK916775 BioCyc:BANT260799:GJAJ-2614-MONOMER
BioCyc:BANT261594:GJ7F-2707-MONOMER Uniprot:Q81PR5
Length = 305
Score = 119 (46.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 29/108 (26%), Positives = 50/108 (46%)
Query: 278 GTHMVIGGLPLMVISVLNHDPVYGESVKELTSSDIL-ALLYTSIFGSAISYGVYFYXXXX 336
G M GG+ L+++S + P +V L S + +LY GS +G+Y++
Sbjct: 184 GIQMFYGGVLLLIVSFIVEQP----NVTVLASWSVQWPILYLIFIGSIGGHGLYYWLLSK 239
Query: 337 XXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 384
P+ A I G++ LGE +P+ +GA +V ++L N
Sbjct: 240 TNPVFPSTWLYVSPLIAIIVGYIILGEPLNPIMGIGACFILVGVFLAN 287
Score = 57 (25.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 28/105 (26%), Positives = 49/105 (46%)
Query: 120 VLVSPFFFWGTAMVAMKEVLPKAGT--FFVAAFRLIPAG-LLLITFASSQGRKLPSGFNA 176
+LV F GT + +K + +AG F A R AG +L+I F + +P F+
Sbjct: 7 ILVCIIF--GTTFLTIKIGI-EAGAPPLFSAGIRFFLAGVILMIIFKLKRKEIMPHIFSR 63
Query: 177 WVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVL 221
+ F L + + A+ Q S+GL +V+ + P+ + +L
Sbjct: 64 RIIYAGFCLTFMTFATLYWAE--QYISSGLAAVLSATGPMMILLL 106
>UNIPROTKB|Q8E8X4 [details] [associations]
symbol:SO_4527 "10 TMS drug/metabolite efflux pump (DME)
family" species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:AE014299 GenomeReviews:AE014299_GR HOGENOM:HOG000275237
KO:K15269 RefSeq:NP_720046.1 DNASU:1172117 GeneID:1172117
KEGG:son:SO_4527 PATRIC:23528723 OMA:TINIAAF ProtClustDB:CLSK907692
Uniprot:Q8E8X4
Length = 284
Score = 99 (39.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 30/105 (28%), Positives = 48/105 (45%)
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
L++P F WGT + L ++VA +R +PAG+LL+ +LP+ AW +
Sbjct: 7 LLAPVF-WGTTYALVSLYLQDMSPYWVAVWRALPAGVLLLMLRP----RLPT--LAWSKL 59
Query: 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALL 225
L A + F L G R + + + PL +LA L+
Sbjct: 60 SLLAFCNIGAFFTLLFIGAYRLPGAVAGTLGATLPLIFLILAWLI 104
Score = 76 (31.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 29/133 (21%), Positives = 58/133 (43%)
Query: 252 AFDESNSSLWGSGEWWMLLAAQSMAVGTHMVIGGLPLMVISVLNHDPVYGESVKELTSSD 311
AF W G++ +L A Q +++GGL L+ ++ L P ++ S D
Sbjct: 150 AFSSRWMQRWDVGDFLVLTAWQ-------LLLGGLMLIPLAWLMAGP------PQIPSMD 196
Query: 312 IL-ALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQL 370
++ +L++ + +A++Y + + P+ A G L +GET Q
Sbjct: 197 VVPSLIWLATANTAVAYWAWLWSMRNLGPEIMGMVALVNPVVAVSLGVLIVGETLDMRQW 256
Query: 371 VGAAVTVVAIYLV 383
G V ++++ L+
Sbjct: 257 AGILVILLSLLLM 269
>TIGR_CMR|SO_4527 [details] [associations]
symbol:SO_4527 "integral membrane domain protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:AE014299 GenomeReviews:AE014299_GR HOGENOM:HOG000275237
KO:K15269 RefSeq:NP_720046.1 DNASU:1172117 GeneID:1172117
KEGG:son:SO_4527 PATRIC:23528723 OMA:TINIAAF ProtClustDB:CLSK907692
Uniprot:Q8E8X4
Length = 284
Score = 99 (39.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 30/105 (28%), Positives = 48/105 (45%)
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
L++P F WGT + L ++VA +R +PAG+LL+ +LP+ AW +
Sbjct: 7 LLAPVF-WGTTYALVSLYLQDMSPYWVAVWRALPAGVLLLMLRP----RLPT--LAWSKL 59
Query: 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALL 225
L A + F L G R + + + PL +LA L+
Sbjct: 60 SLLAFCNIGAFFTLLFIGAYRLPGAVAGTLGATLPLIFLILAWLI 104
Score = 76 (31.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 29/133 (21%), Positives = 58/133 (43%)
Query: 252 AFDESNSSLWGSGEWWMLLAAQSMAVGTHMVIGGLPLMVISVLNHDPVYGESVKELTSSD 311
AF W G++ +L A Q +++GGL L+ ++ L P ++ S D
Sbjct: 150 AFSSRWMQRWDVGDFLVLTAWQ-------LLLGGLMLIPLAWLMAGP------PQIPSMD 196
Query: 312 IL-ALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQL 370
++ +L++ + +A++Y + + P+ A G L +GET Q
Sbjct: 197 VVPSLIWLATANTAVAYWAWLWSMRNLGPEIMGMVALVNPVVAVSLGVLIVGETLDMRQW 256
Query: 371 VGAAVTVVAIYLV 383
G V ++++ L+
Sbjct: 257 AGILVILLSLLLM 269
>UNIPROTKB|Q3AAZ7 [details] [associations]
symbol:CHY_1867 "Putative membrane protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0697
RefSeq:YP_360687.1 STRING:Q3AAZ7 GeneID:3728099 KEGG:chy:CHY_1867
PATRIC:21276829 HOGENOM:HOG000245425 OMA:HIPPLAY
ProtClustDB:CLSK941309 BioCyc:CHYD246194:GJCN-1866-MONOMER
Uniprot:Q3AAZ7
Length = 303
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 61/263 (23%), Positives = 101/263 (38%)
Query: 145 FFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSA 204
FF F L+P L I + KL +G + ++ FL L++ FL G+ T A
Sbjct: 39 FFFGGFVLLPVALSNI---KRKNVKL-TGSD-FLFAFLIGLLNVVLSMSFLQIGINMTKA 93
Query: 205 GLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSG 264
L + I S PL V + A L+ E + S ++G
Sbjct: 94 SLAAAIFSSNPLFVVLFAYLILDEKLNFQKILGLFIGIVGVVIVFYKDLELGISHVYGI- 152
Query: 265 EWWMLLAAQSMAVGTHM------------------VIGGLPLMVISVLNHDPVYGESVKE 306
++LAA + + T + ++G + L+ I +L H P++
Sbjct: 153 -LMLILAAVTYGLYTVLGKRFSQKTDSVIMNSFSFILGSVFLLPIILLKHYPLFS----- 206
Query: 307 LTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFS 366
L IL + Y + F + ++Y YF P+ AS F + LGE +
Sbjct: 207 LQPKAILPMAYLTFFVTGLAYYTYFLGLTNISAGNGSMVFFIKPVLASFFAWAILGEKIT 266
Query: 367 PLQLVGAAVTVVAIYLVNFRGSV 389
+ G V ++ IY+V + G V
Sbjct: 267 FEFIAGTMVILLGIYIVQWAGQV 289
>TIGR_CMR|CHY_1867 [details] [associations]
symbol:CHY_1867 "putative membrane protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0697 RefSeq:YP_360687.1
STRING:Q3AAZ7 GeneID:3728099 KEGG:chy:CHY_1867 PATRIC:21276829
HOGENOM:HOG000245425 OMA:HIPPLAY ProtClustDB:CLSK941309
BioCyc:CHYD246194:GJCN-1866-MONOMER Uniprot:Q3AAZ7
Length = 303
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 61/263 (23%), Positives = 101/263 (38%)
Query: 145 FFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSA 204
FF F L+P L I + KL +G + ++ FL L++ FL G+ T A
Sbjct: 39 FFFGGFVLLPVALSNI---KRKNVKL-TGSD-FLFAFLIGLLNVVLSMSFLQIGINMTKA 93
Query: 205 GLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSG 264
L + I S PL V + A L+ E + S ++G
Sbjct: 94 SLAAAIFSSNPLFVVLFAYLILDEKLNFQKILGLFIGIVGVVIVFYKDLELGISHVYGI- 152
Query: 265 EWWMLLAAQSMAVGTHM------------------VIGGLPLMVISVLNHDPVYGESVKE 306
++LAA + + T + ++G + L+ I +L H P++
Sbjct: 153 -LMLILAAVTYGLYTVLGKRFSQKTDSVIMNSFSFILGSVFLLPIILLKHYPLFS----- 206
Query: 307 LTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFS 366
L IL + Y + F + ++Y YF P+ AS F + LGE +
Sbjct: 207 LQPKAILPMAYLTFFVTGLAYYTYFLGLTNISAGNGSMVFFIKPVLASFFAWAILGEKIT 266
Query: 367 PLQLVGAAVTVVAIYLVNFRGSV 389
+ G V ++ IY+V + G V
Sbjct: 267 FEFIAGTMVILLGIYIVQWAGQV 289
>UNIPROTKB|Q4KB90 [details] [associations]
symbol:PFL_3388 "Putative membrane protein" species:220664
"Pseudomonas protegens Pf-5" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000076
GenomeReviews:CP000076_GR HOGENOM:HOG000184106 RefSeq:YP_260493.1
STRING:Q4KB90 GeneID:3476281 KEGG:pfl:PFL_3388 PATRIC:19876105
eggNOG:NOG311597 OMA:IFFYNLC ProtClustDB:CLSK300052
BioCyc:PFLU220664:GIX8-3403-MONOMER Uniprot:Q4KB90
Length = 318
Score = 101 (40.6 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 26/83 (31%), Positives = 39/83 (46%)
Query: 302 ESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYL 361
++V L + L+LLY + GSA++Y Y+ P+ A I G L L
Sbjct: 224 QAVARLNLAQGLSLLYLGVLGSALAYIWYYDGLRRIGATRCGVFIALNPLTAVILGALVL 283
Query: 362 GETFSPLQLVGAAVTVVAIYLVN 384
GE SP+ +G A+ + IY N
Sbjct: 284 GEQLSPVMGLGGALILGGIYQCN 306
Score = 64 (27.6 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 30/113 (26%), Positives = 47/113 (41%)
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKL--PS--GFNA 176
L + WG VA + + A+ R + A L L+ F + L PS F
Sbjct: 23 LATVTMIWGGTFVAGRYLAGGLSPLLAASLRFLLASLALLGFMAVARIPLVRPSLRQFGQ 82
Query: 177 WVSIFLFALVDAS-CFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE 228
+ F + + CF FL GL++ A S+I+ P +A+ + LF E
Sbjct: 83 LALLGFFGIFFYNLCF--FL--GLEQVKASRASLIVALNPAVIALASWALFKE 131
>UNIPROTKB|Q47X10 [details] [associations]
symbol:CPS_4003 "Membrane protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0697 RefSeq:YP_270661.1
STRING:Q47X10 GeneID:3522261 KEGG:cps:CPS_4003 PATRIC:21470887
HOGENOM:HOG000217314 OMA:CGGIDWR ProtClustDB:CLSK2768413
BioCyc:CPSY167879:GI48-4016-MONOMER Uniprot:Q47X10
Length = 307
Score = 92 (37.4 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 31/113 (27%), Positives = 50/113 (44%)
Query: 120 VLVSPFFF---WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNA 176
+ PFFF +G+ V K LP + + R + AGL+L+ A G +LP+ A
Sbjct: 16 IFALPFFFVLLYGSGFVGAKLGLPHSTPLSFLSLRFMAAGLILLIIAKLIGNQLPNWREA 75
Query: 177 WVSIFLFALVDASCFQ-GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE 228
+ I + + F G S + ++I+ QP+ VA+ A L E
Sbjct: 76 -IHISVAGSLTVCLFSVGVFVSIDMGLSPAVSALIVALQPILVALFARKLVNE 127
Score = 70 (29.7 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 302 ESVKEL-TSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLY 360
ES K + T I++L+Y + S + + + P+ A++ +L
Sbjct: 211 ESFKVVWTGEFIISLVYMVVGVSLGALSLLYIMIQRGEVSRVASVFYLVPVSAAVSAYLL 270
Query: 361 LGETFSPLQLVGAAVTVVAIYLVN 384
GET L GA++ + I+L N
Sbjct: 271 FGETIESTTLFGASIIALGIFLTN 294
>TIGR_CMR|CPS_4003 [details] [associations]
symbol:CPS_4003 "membrane protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=ISS] InterPro:IPR000620
Pfam:PF00892 GO:GO:0016020 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG0697 RefSeq:YP_270661.1 STRING:Q47X10 GeneID:3522261
KEGG:cps:CPS_4003 PATRIC:21470887 HOGENOM:HOG000217314 OMA:CGGIDWR
ProtClustDB:CLSK2768413 BioCyc:CPSY167879:GI48-4016-MONOMER
Uniprot:Q47X10
Length = 307
Score = 92 (37.4 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 31/113 (27%), Positives = 50/113 (44%)
Query: 120 VLVSPFFF---WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNA 176
+ PFFF +G+ V K LP + + R + AGL+L+ A G +LP+ A
Sbjct: 16 IFALPFFFVLLYGSGFVGAKLGLPHSTPLSFLSLRFMAAGLILLIIAKLIGNQLPNWREA 75
Query: 177 WVSIFLFALVDASCFQ-GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE 228
+ I + + F G S + ++I+ QP+ VA+ A L E
Sbjct: 76 -IHISVAGSLTVCLFSVGVFVSIDMGLSPAVSALIVALQPILVALFARKLVNE 127
Score = 70 (29.7 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 302 ESVKEL-TSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLY 360
ES K + T I++L+Y + S + + + P+ A++ +L
Sbjct: 211 ESFKVVWTGEFIISLVYMVVGVSLGALSLLYIMIQRGEVSRVASVFYLVPVSAAVSAYLL 270
Query: 361 LGETFSPLQLVGAAVTVVAIYLVN 384
GET L GA++ + I+L N
Sbjct: 271 FGETIESTTLFGASIIALGIFLTN 294
>TIGR_CMR|BA_3061 [details] [associations]
symbol:BA_3061 "transporter, EamA family" species:198094
"Bacillus anthracis str. Ames" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR OMA:NTLTWPV
HOGENOM:HOG000093012 ProtClustDB:CLSK916911 RefSeq:NP_845391.1
RefSeq:YP_019702.1 RefSeq:YP_029105.1 DNASU:1088199
EnsemblBacteria:EBBACT00000010502 EnsemblBacteria:EBBACT00000015515
EnsemblBacteria:EBBACT00000023157 GeneID:1088199 GeneID:2817371
GeneID:2850052 KEGG:ban:BA_3061 KEGG:bar:GBAA_3061 KEGG:bat:BAS2848
BioCyc:BANT260799:GJAJ-2910-MONOMER
BioCyc:BANT261594:GJ7F-3013-MONOMER Uniprot:Q81NW1
Length = 303
Score = 120 (47.3 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 65/295 (22%), Positives = 114/295 (38%)
Query: 116 LEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAG--LLLITFASSQGRKLPSG 173
+EW +LVS WG K + + + R + A LLLITF + ++
Sbjct: 6 MEW-LLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSLRIER- 63
Query: 174 FNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE--SXX 231
W+ + +V + +Q ++ TSA S++I P+ +LA L E S
Sbjct: 64 -KDWLRLVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHKQERFSMK 122
Query: 232 XXXXXXXXXXXXXXXXXEAPAFDESNSSLW-GS--G-----EW-WMLLAAQ-------SM 275
+ W G+ G W W + AQ +M
Sbjct: 123 VQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQPLITKYSAM 182
Query: 276 AVGT-HMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXX 334
V + +IG +PL++ + N + + V L+ +L Y+ IF + +++
Sbjct: 183 RVTSWSTLIGIVPLVIYCLFNVNSLTWP-VDTLSWG---SLAYSIIFATIFGLAMWYVGI 238
Query: 335 XXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGSV 389
P+FA IF + +GE + +QLVG + V +Y+V +G +
Sbjct: 239 SQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFVGLYVVK-KGGI 292
>UNIPROTKB|P31437 [details] [associations]
symbol:yicL "inhibitor of heme biosynthesis" species:83333
"Escherichia coli K-12" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000620 InterPro:IPR004779 Pfam:PF00892 GO:GO:0016021
GO:GO:0005886 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006810 EMBL:L10328 eggNOG:COG0697
TIGRFAMs:TIGR00950 PIR:E65167 RefSeq:NP_418116.1 RefSeq:YP_491775.1
ProteinModelPortal:P31437 EnsemblBacteria:EBESCT00000004055
EnsemblBacteria:EBESCT00000015184 GeneID:12930633 GeneID:948176
KEGG:ecj:Y75_p3515 KEGG:eco:b3660 PATRIC:32122809 EchoBASE:EB1639
EcoGene:EG11688 HOGENOM:HOG000083322 OMA:NRPARDE
ProtClustDB:CLSK880756 BioCyc:EcoCyc:EG11688-MONOMER
BioCyc:ECOL316407:JW3634-MONOMER Genevestigator:P31437
Uniprot:P31437
Length = 307
Score = 82 (33.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 29/109 (26%), Positives = 58/109 (53%)
Query: 120 VLVSPFFFWGTAMVAMKEVLPKA--GTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAW 177
VL++ WG++ V + ++ ++ + F+ RLI AGL+L+T + G K+ S N
Sbjct: 11 VLIAAVL-WGSSGVCAQYIMEQSQMSSQFLTMTRLIFAGLILLTLSFVHGDKIFSIINNH 69
Query: 178 ---VSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAA 223
+S+ +F++V A Q +++++A +V+ Q LS ++ A
Sbjct: 70 KDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVL---QFLSPTIIVA 115
Score = 78 (32.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 25/110 (22%), Positives = 47/110 (42%)
Query: 277 VGTHMVIGGLPLMVISVLNHDPVYGESVKE--LTSSDILALLYTSIFGSAISYGVYFYXX 334
VG M+IGGL L+ P Y + S ILA Y + G+++++ +Y
Sbjct: 189 VGWSMLIGGLILL--------PFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA 240
Query: 335 XXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 384
P+ +++ L LG TF+ +G + + ++ L++
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILIS 290
>TIGR_CMR|BA_1915 [details] [associations]
symbol:BA_1915 "transporter, EamA family" species:198094
"Bacillus anthracis str. Ames" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
RefSeq:NP_844324.1 RefSeq:YP_018559.1 RefSeq:YP_028041.1
DNASU:1087054 EnsemblBacteria:EBBACT00000013050
EnsemblBacteria:EBBACT00000016903 EnsemblBacteria:EBBACT00000020730
GeneID:1087054 GeneID:2819760 GeneID:2850777 KEGG:ban:BA_1915
KEGG:bar:GBAA_1915 KEGG:bat:BAS1777 HOGENOM:HOG000088120
OMA:CLALAIC ProtClustDB:CLSK887895
BioCyc:BANT260799:GJAJ-1846-MONOMER
BioCyc:BANT261594:GJ7F-1919-MONOMER Uniprot:Q81RX2
Length = 301
Score = 91 (37.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 29/110 (26%), Positives = 46/110 (41%)
Query: 120 VLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVS 179
+L F WG K L A R + G +L+ FA + ++L W
Sbjct: 12 ILTFLVFMWGINWPLSKFALHYTPPVLFAGVRTLIGGFILLLFALPKYKELHLK-ETWHL 70
Query: 180 IFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGES 229
+ +L++ F G GLQ AGL S I+ QP+ + + + + ES
Sbjct: 71 YVISSLLNIIIFYGLQTVGLQYMPAGLFSAIVFLQPVLLGIFSWIWLEES 120
Score = 64 (27.6 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 18/75 (24%), Positives = 29/75 (38%)
Query: 312 ILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLV 371
+ LL+ S F A+ + YF P+ A I ++L E + +
Sbjct: 214 VSVLLFISFFVIAMGWLAYFTLVGAGEASKVGAYTFLIPLIAIIVSSIFLHEAITISLFI 273
Query: 372 GAAVTVVAIYLVNFR 386
G VV+I VN +
Sbjct: 274 GLLFIVVSICFVNIK 288
>UNIPROTKB|Q88B23 [details] [associations]
symbol:PSPTO_0210 "Membrane protein, putative"
species:223283 "Pseudomonas syringae pv. tomato str. DC3000"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000620 Pfam:PF00892
GO:GO:0016020 EMBL:AE016853 GenomeReviews:AE016853_GR
eggNOG:COG0697 RefSeq:NP_790061.1 GeneID:1181818
KEGG:pst:PSPTO_0210 PATRIC:19991580 HOGENOM:HOG000219095
OMA:FLHEKIN ProtClustDB:CLSK870500
BioCyc:PSYR223283:GJIX-205-MONOMER Uniprot:Q88B23
Length = 291
Score = 106 (42.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 32/116 (27%), Positives = 57/116 (49%)
Query: 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGF 174
++ + +++ F WGT+ VA K A + R AGL + R +PS
Sbjct: 1 MIPYLYVLAAAFLWGTSFVAGKIAFGVADAPLIVLARFAMAGLFWLPVFCRSVRSVPS-- 58
Query: 175 NAWVSIFL--FALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE 228
+ W ++ L F ++ A+ F+ GLQ TSA +++I +PL V ++ L++ E
Sbjct: 59 SRWGALLLLSFLMIPATFLLQFM--GLQYTSATSATLMIGFEPLMVMLVGWLIWRE 112
Score = 46 (21.3 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 16/79 (20%), Positives = 30/79 (37%)
Query: 307 LTSSDILALLYTSIFGSAISYG-VYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETF 365
L++ ALLY + G ++ G ++ P+F IF L E
Sbjct: 200 LSTQGASALLYLGV-GCSLGAGWLWNMGMRSIPANAGGMFLALEPIFGVIFAVALLYEPL 258
Query: 366 SPLQLVGAAVTVVAIYLVN 384
L G + V+ + +++
Sbjct: 259 GATTLAGIGLVVIPVLVIS 277
>TIGR_CMR|BA_0829 [details] [associations]
symbol:BA_0829 "transporter, EamA family" species:198094
"Bacillus anthracis str. Ames" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR OMA:IFLGEEL
RefSeq:NP_843346.1 RefSeq:YP_017467.1 RefSeq:YP_027065.1
IntAct:Q81UN5 DNASU:1088044 EnsemblBacteria:EBBACT00000010024
EnsemblBacteria:EBBACT00000015709 EnsemblBacteria:EBBACT00000022247
GeneID:1088044 GeneID:2814609 GeneID:2853121 KEGG:ban:BA_0829
KEGG:bar:GBAA_0829 KEGG:bat:BAS0789 HOGENOM:HOG000084080
ProtClustDB:CLSK915986 BioCyc:BANT260799:GJAJ-869-MONOMER
BioCyc:BANT261594:GJ7F-899-MONOMER Uniprot:Q81UN5
Length = 303
Score = 114 (45.2 bits), Expect = 0.00045, P = 0.00045
Identities = 59/278 (21%), Positives = 103/278 (37%)
Query: 120 VLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVS 179
+L+ WG V K ++ A + + R I A + L+ + +K+ A +
Sbjct: 8 LLLLTSLLWGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWFKEKKIIPPRAAILP 67
Query: 180 IFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXX 239
+ L + + F F L++TSA +I +S+A+ + L E
Sbjct: 68 LILMGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMI 127
Query: 240 XXXXXXXXXEAPA-FDESNSSLWGSGEWWMLLAAQSMAVGTHMVIGG------LPLM--- 289
F S + SG+ WM+ A G + V PLM
Sbjct: 128 LSFFGVILVLLKGNFALLFSLHFNSGDLWMIAAV--CIWGIYSVCSKWATKTTTPLMATL 185
Query: 290 ---VISVLNHDPV-YGE-SVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXX 344
+ V+ P G +V + +S I +LLYT + + + +
Sbjct: 186 YSGIFGVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGI 245
Query: 345 XXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYL 382
P+F +I FL+LGE + +Q+VG + + YL
Sbjct: 246 FLNFNPIFTAILAFLFLGEELTWIQIVGTMIVMTGCYL 283
>UNIPROTKB|P0ABT8 [details] [associations]
symbol:yijE "predicted permease" species:83333 "Escherichia
coli K-12" [GO:0055085 "transmembrane transport" evidence=RCA]
[GO:0022857 "transmembrane transporter activity" evidence=RCA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA;RCA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] InterPro:IPR000620
Pfam:PF00892 GO:GO:0016021 GO:GO:0005886 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006810
EMBL:U00006 eggNOG:COG0697 PIR:I78664 RefSeq:NP_418378.4
RefSeq:YP_491508.1 ProteinModelPortal:P0ABT8
EnsemblBacteria:EBESCT00000004522 EnsemblBacteria:EBESCT00000017207
GeneID:12932109 GeneID:948445 KEGG:ecj:Y75_p3244 KEGG:eco:b3943
PATRIC:32123407 EchoBASE:EB1847 EcoGene:EG11902
HOGENOM:HOG000277404 OMA:EGNDTTI ProtClustDB:CLSK880819
BioCyc:EcoCyc:EG11902-MONOMER BioCyc:ECOL316407:JW5557-MONOMER
Genevestigator:P0ABT8 Uniprot:P0ABT8
Length = 301
Score = 89 (36.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 31/109 (28%), Positives = 46/109 (42%)
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKL-PSGFNAWVS 179
LV W + + MK+V G F A R I L+L +GR + P+ F ++
Sbjct: 15 LVVLTLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRGMRPTPFKYTLA 74
Query: 180 IFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE 228
I AL+ G L AG +++ + P V + AAL GE
Sbjct: 75 I---ALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGE 120
Score = 65 (27.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 15/71 (21%), Positives = 33/71 (46%)
Query: 314 ALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGA 373
AL Y++I +A+++ ++ + P+ +F + LGE ++ G
Sbjct: 219 ALAYSAILATALAWSLWLFVLKNLPASIASLSTLAVPVCGVLFSWWLLGENPGAVEGSGI 278
Query: 374 AVTVVAIYLVN 384
+ V+A+ LV+
Sbjct: 279 VLIVLALALVS 289
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 389 321 0.00085 116 3 11 22 0.49 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 617 (66 KB)
Total size of DFA: 211 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.33u 0.09s 25.42t Elapsed: 00:00:02
Total cpu time: 25.33u 0.09s 25.42t Elapsed: 00:00:02
Start: Sat May 11 06:54:33 2013 End: Sat May 11 06:54:35 2013