Query 016434
Match_columns 389
No_of_seqs 254 out of 1767
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 06:49:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016434.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016434hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK11272 putative DMT superfam 100.0 3.2E-30 6.8E-35 242.7 34.8 260 118-387 10-287 (292)
2 PLN00411 nodulin MtN21 family 100.0 2.1E-30 4.5E-35 248.4 32.8 272 114-388 11-331 (358)
3 PRK11689 aromatic amino acid e 100.0 4.1E-30 8.9E-35 242.2 31.1 261 116-387 4-289 (295)
4 PRK11453 O-acetylserine/cystei 100.0 1.8E-29 3.9E-34 238.3 32.9 261 119-388 7-290 (299)
5 PRK15430 putative chlorampheni 100.0 1.7E-28 3.8E-33 231.3 33.1 259 113-384 5-284 (296)
6 PRK10532 threonine and homoser 100.0 3.4E-28 7.4E-33 228.9 32.7 258 113-387 9-283 (293)
7 TIGR00950 2A78 Carboxylate/Ami 100.0 9E-28 1.9E-32 222.3 30.0 238 128-380 1-259 (260)
8 TIGR03340 phn_DUF6 phosphonate 100.0 1E-25 2.3E-30 210.9 29.9 257 118-382 3-280 (281)
9 PTZ00343 triose or hexose phos 100.0 3.6E-25 7.9E-30 212.9 32.0 262 119-387 52-350 (350)
10 KOG4510 Permease of the drug/m 99.9 3.2E-29 7E-34 219.5 1.6 266 113-387 35-327 (346)
11 TIGR00688 rarD rarD protein. T 99.9 5.4E-25 1.2E-29 203.4 27.6 231 116-360 2-255 (256)
12 TIGR00817 tpt Tpt phosphate/ph 99.9 2.4E-24 5.2E-29 203.9 29.5 252 131-388 17-296 (302)
13 COG0697 RhaT Permeases of the 99.9 1.7E-22 3.7E-27 189.3 33.7 272 115-388 6-290 (292)
14 PF06027 DUF914: Eukaryotic pr 99.9 1E-22 2.2E-27 191.5 28.1 263 122-388 20-308 (334)
15 COG5006 rhtA Threonine/homoser 99.9 1.1E-21 2.3E-26 171.4 27.3 251 117-384 13-281 (292)
16 COG2962 RarD Predicted permeas 99.9 1E-20 2.2E-25 169.8 27.2 260 114-385 5-283 (293)
17 TIGR00776 RhaT RhaT L-rhamnose 99.9 4.9E-20 1.1E-24 172.9 28.3 257 117-387 2-290 (290)
18 KOG2765 Predicted membrane pro 99.8 2.3E-17 4.9E-22 152.1 17.1 275 111-387 9-392 (416)
19 PF08449 UAA: UAA transporter 99.7 2.1E-15 4.5E-20 142.7 28.4 243 143-388 31-300 (303)
20 COG2510 Predicted membrane pro 99.7 3.7E-16 8E-21 122.8 11.2 133 117-250 4-139 (140)
21 KOG2766 Predicted membrane pro 99.6 5.8E-17 1.3E-21 141.8 1.1 256 122-388 25-302 (336)
22 KOG1441 Glucose-6-phosphate/ph 99.6 1.1E-14 2.4E-19 135.6 9.8 248 133-388 34-310 (316)
23 PF00892 EamA: EamA-like trans 99.5 6E-14 1.3E-18 114.4 12.0 123 126-249 1-125 (126)
24 KOG2234 Predicted UDP-galactos 99.4 4.8E-10 1E-14 104.1 30.3 266 116-387 15-324 (345)
25 KOG1580 UDP-galactose transpor 99.4 2.1E-12 4.4E-17 112.2 13.4 237 144-383 53-311 (337)
26 TIGR00950 2A78 Carboxylate/Ami 99.4 1.8E-11 3.8E-16 113.2 17.7 131 115-245 127-259 (260)
27 PF04142 Nuc_sug_transp: Nucle 99.4 6.7E-11 1.4E-15 107.8 20.7 199 172-376 12-244 (244)
28 COG2510 Predicted membrane pro 99.4 5.8E-12 1.3E-16 99.3 9.7 118 264-385 4-139 (140)
29 PF13536 EmrE: Multidrug resis 99.3 2.3E-11 5.1E-16 97.7 11.5 105 149-254 2-110 (113)
30 PRK10532 threonine and homoser 99.3 2.2E-10 4.7E-15 108.0 18.7 137 115-252 147-283 (293)
31 PF06800 Sugar_transport: Suga 99.3 1.5E-09 3.2E-14 98.9 21.7 228 142-382 10-268 (269)
32 KOG1443 Predicted integral mem 99.2 1.5E-09 3.2E-14 98.3 19.7 240 139-384 39-314 (349)
33 PRK11272 putative DMT superfam 99.2 8.3E-10 1.8E-14 104.0 17.7 137 115-252 149-287 (292)
34 KOG1444 Nucleotide-sugar trans 99.2 2.7E-08 5.8E-13 91.3 25.5 253 128-387 24-302 (314)
35 PRK11689 aromatic amino acid e 99.1 1.9E-09 4E-14 101.7 17.1 134 115-252 155-289 (295)
36 PRK13499 rhamnose-proton sympo 99.1 1.5E-07 3.2E-12 89.3 28.6 271 113-388 4-344 (345)
37 KOG1581 UDP-galactose transpor 99.1 7.5E-09 1.6E-13 93.8 18.8 240 143-385 50-313 (327)
38 PLN00411 nodulin MtN21 family 99.1 2.9E-09 6.3E-14 102.6 16.9 137 115-252 188-330 (358)
39 PRK11453 O-acetylserine/cystei 99.1 8.7E-09 1.9E-13 97.4 18.4 138 115-252 142-289 (299)
40 PF05653 Mg_trans_NIPA: Magnes 99.0 2.6E-08 5.6E-13 93.6 19.3 257 111-388 2-295 (300)
41 KOG3912 Predicted integral mem 99.0 9.7E-09 2.1E-13 91.9 14.7 251 129-384 16-333 (372)
42 TIGR03340 phn_DUF6 phosphonate 99.0 3.2E-09 7E-14 99.4 11.7 134 115-248 143-281 (281)
43 PF00892 EamA: EamA-like trans 99.0 4.9E-09 1.1E-13 85.2 10.2 80 305-384 46-125 (126)
44 TIGR00817 tpt Tpt phosphate/ph 98.9 3E-08 6.6E-13 93.8 14.2 138 115-252 144-295 (302)
45 KOG4314 Predicted carbohydrate 98.9 1.2E-08 2.6E-13 86.7 9.3 193 189-387 64-278 (290)
46 PRK15430 putative chlorampheni 98.8 1.4E-07 3E-12 89.0 16.4 132 120-252 153-287 (296)
47 COG0697 RhaT Permeases of the 98.8 3.5E-07 7.5E-12 85.4 18.2 135 115-251 153-288 (292)
48 PRK15051 4-amino-4-deoxy-L-ara 98.8 2.3E-07 4.9E-12 74.0 14.2 70 181-250 40-109 (111)
49 COG5006 rhtA Threonine/homoser 98.8 1.7E-07 3.6E-12 83.0 14.3 137 112-248 144-280 (292)
50 TIGR00776 RhaT RhaT L-rhamnose 98.7 4.1E-07 8.8E-12 85.5 13.4 129 115-250 151-288 (290)
51 KOG1442 GDP-fucose transporter 98.7 2.1E-08 4.5E-13 89.5 4.3 251 133-387 45-329 (347)
52 PTZ00343 triose or hexose phos 98.7 1.5E-06 3.2E-11 84.0 17.4 135 115-249 193-347 (350)
53 PRK02971 4-amino-4-deoxy-L-ara 98.6 2.4E-07 5.2E-12 75.7 10.0 74 315-388 50-125 (129)
54 PRK02971 4-amino-4-deoxy-L-ara 98.6 1.3E-06 2.8E-11 71.4 13.6 120 117-252 3-124 (129)
55 PF13536 EmrE: Multidrug resis 98.6 5.6E-07 1.2E-11 72.2 10.3 77 310-387 32-108 (113)
56 PRK15051 4-amino-4-deoxy-L-ara 98.5 1E-06 2.2E-11 70.3 10.5 68 318-385 42-109 (111)
57 PF03151 TPT: Triose-phosphate 98.5 6.7E-06 1.5E-10 69.4 16.0 130 117-247 1-150 (153)
58 PF03151 TPT: Triose-phosphate 98.5 2.3E-06 5.1E-11 72.2 13.0 104 281-385 43-153 (153)
59 TIGR00688 rarD rarD protein. T 98.5 3.2E-06 6.8E-11 78.0 13.7 72 313-385 71-142 (256)
60 COG4975 GlcU Putative glucose 98.4 1E-07 2.2E-12 84.0 2.2 258 117-387 3-287 (288)
61 TIGR00803 nst UDP-galactose tr 98.4 1.9E-06 4.1E-11 77.8 10.2 173 205-383 5-222 (222)
62 KOG1582 UDP-galactose transpor 98.4 5.1E-05 1.1E-09 68.1 18.2 250 132-387 59-334 (367)
63 COG5070 VRG4 Nucleotide-sugar 98.3 1.8E-05 4E-10 68.9 14.0 251 131-385 21-296 (309)
64 KOG1583 UDP-N-acetylglucosamin 98.2 3.2E-06 6.9E-11 75.9 7.3 236 144-384 33-313 (330)
65 PF06379 RhaT: L-rhamnose-prot 98.2 0.0066 1.4E-07 57.1 28.3 270 114-387 5-342 (344)
66 PF06800 Sugar_transport: Suga 98.1 6.4E-05 1.4E-09 68.8 13.5 121 112-237 134-254 (269)
67 KOG2922 Uncharacterized conser 98.1 1.8E-05 4E-10 72.8 9.8 255 109-388 14-309 (335)
68 PRK09541 emrE multidrug efflux 98.0 0.00038 8.2E-09 55.2 13.3 68 185-252 37-105 (110)
69 PF06027 DUF914: Eukaryotic pr 97.9 0.00033 7.1E-09 66.6 15.2 140 112-252 164-307 (334)
70 PRK10452 multidrug efflux syst 97.9 0.00031 6.7E-09 56.4 12.3 69 184-252 36-105 (120)
71 PF10639 UPF0546: Uncharacteri 97.9 4.6E-05 1E-09 60.2 7.0 110 122-248 2-112 (113)
72 COG2962 RarD Predicted permeas 97.9 0.0002 4.3E-09 65.4 11.9 122 263-386 7-145 (293)
73 PRK09541 emrE multidrug efflux 97.8 0.00019 4.1E-09 56.9 9.6 68 320-387 37-105 (110)
74 PF04657 DUF606: Protein of un 97.8 0.00097 2.1E-08 55.3 13.5 129 118-247 3-138 (138)
75 COG2076 EmrE Membrane transpor 97.8 0.00024 5.2E-09 55.2 8.9 67 185-251 37-104 (106)
76 PRK10452 multidrug efflux syst 97.7 0.00027 5.9E-09 56.8 9.3 69 319-387 36-105 (120)
77 PF08449 UAA: UAA transporter 97.7 0.00075 1.6E-08 63.9 14.0 135 117-252 155-299 (303)
78 PRK10650 multidrug efflux syst 97.7 0.0018 3.9E-08 51.2 12.8 63 187-249 44-107 (109)
79 COG2076 EmrE Membrane transpor 97.6 0.00064 1.4E-08 52.9 9.4 67 321-387 38-105 (106)
80 PRK11431 multidrug efflux syst 97.6 0.00082 1.8E-08 52.8 9.7 66 185-250 36-102 (105)
81 PRK11431 multidrug efflux syst 97.6 0.00079 1.7E-08 52.9 9.4 67 321-387 37-104 (105)
82 KOG4510 Permease of the drug/m 97.5 4.7E-05 1E-09 68.2 2.4 136 115-251 190-326 (346)
83 PRK10650 multidrug efflux syst 97.5 0.0013 2.7E-08 52.0 9.3 65 321-385 43-108 (109)
84 PF00893 Multi_Drug_Res: Small 97.3 0.003 6.4E-08 48.6 9.5 55 187-241 38-93 (93)
85 KOG1581 UDP-galactose transpor 97.0 0.009 2E-07 55.0 11.4 142 108-250 164-313 (327)
86 KOG2765 Predicted membrane pro 97.0 0.0099 2.2E-07 56.2 11.6 140 112-252 243-392 (416)
87 PF00893 Multi_Drug_Res: Small 97.0 0.0029 6.3E-08 48.7 6.8 56 321-376 37-93 (93)
88 KOG1441 Glucose-6-phosphate/ph 96.8 0.0046 1E-07 58.2 8.0 135 114-250 161-307 (316)
89 PF05653 Mg_trans_NIPA: Magnes 96.7 0.014 3.1E-07 54.9 10.7 66 319-384 56-121 (300)
90 PF07857 DUF1632: CEO family ( 96.7 0.062 1.3E-06 49.1 14.2 207 117-340 1-250 (254)
91 PF04142 Nuc_sug_transp: Nucle 96.6 0.012 2.6E-07 53.8 9.1 77 310-387 15-91 (244)
92 COG3238 Uncharacterized protei 96.4 0.16 3.5E-06 42.3 13.6 134 116-250 5-146 (150)
93 PRK13499 rhamnose-proton sympo 96.3 0.21 4.6E-06 47.8 15.9 138 112-251 170-342 (345)
94 TIGR00803 nst UDP-galactose tr 96.3 0.049 1.1E-06 48.9 10.9 59 189-247 163-221 (222)
95 COG4975 GlcU Putative glucose 95.8 0.0085 1.8E-07 53.5 3.3 117 264-388 3-139 (288)
96 PF04657 DUF606: Protein of un 95.3 0.41 8.8E-06 39.6 11.6 96 281-382 38-138 (138)
97 KOG1580 UDP-galactose transpor 95.3 0.11 2.4E-06 46.2 8.5 137 115-252 171-315 (337)
98 PF10639 UPF0546: Uncharacteri 95.0 0.064 1.4E-06 42.5 5.5 62 321-382 49-111 (113)
99 KOG1444 Nucleotide-sugar trans 94.7 0.33 7.1E-06 45.3 10.3 135 115-250 156-300 (314)
100 KOG4831 Unnamed protein [Funct 94.4 0.32 7E-06 37.5 7.9 112 119-249 6-124 (125)
101 COG3238 Uncharacterized protei 94.4 1.2 2.5E-05 37.3 11.9 103 281-388 42-149 (150)
102 KOG4314 Predicted carbohydrate 93.0 0.081 1.8E-06 45.7 2.8 61 326-386 66-126 (290)
103 PRK02237 hypothetical protein; 92.9 0.92 2E-05 35.3 8.1 48 341-388 61-108 (109)
104 KOG2922 Uncharacterized conser 92.7 0.044 9.6E-07 51.0 0.8 67 318-384 69-135 (335)
105 COG5070 VRG4 Nucleotide-sugar 91.9 1.4 3E-05 39.1 9.0 132 117-249 156-295 (309)
106 KOG2234 Predicted UDP-galactos 91.9 1.2 2.6E-05 42.2 9.3 64 322-385 101-164 (345)
107 PRK02237 hypothetical protein; 91.7 3.2 6.8E-05 32.4 9.7 39 213-251 68-106 (109)
108 PF02694 UPF0060: Uncharacteri 90.7 3.2 7E-05 32.3 8.9 53 199-251 51-104 (107)
109 PF02694 UPF0060: Uncharacteri 90.3 2.1 4.5E-05 33.3 7.6 47 342-388 60-106 (107)
110 PF07857 DUF1632: CEO family ( 89.6 1.6 3.6E-05 39.9 7.8 60 111-170 178-249 (254)
111 KOG1582 UDP-galactose transpor 89.4 4.2 9.2E-05 37.3 10.0 137 115-252 189-334 (367)
112 KOG3912 Predicted integral mem 88.4 1 2.3E-05 41.3 5.5 65 321-385 94-158 (372)
113 KOG1442 GDP-fucose transporter 86.9 0.69 1.5E-05 42.3 3.5 135 114-249 183-326 (347)
114 KOG1443 Predicted integral mem 85.8 17 0.00037 34.1 11.8 133 115-248 163-313 (349)
115 PF04342 DUF486: Protein of un 85.2 4.9 0.00011 31.2 6.8 51 334-384 56-107 (108)
116 COG1742 Uncharacterized conser 80.2 6.9 0.00015 30.3 5.9 48 341-388 60-107 (109)
117 COG1742 Uncharacterized conser 76.5 3.2 7E-05 32.0 3.2 39 214-252 68-106 (109)
118 KOG1583 UDP-N-acetylglucosamin 75.8 24 0.00051 32.7 9.0 134 112-250 160-314 (330)
119 COG3169 Uncharacterized protei 72.4 11 0.00024 28.8 5.1 32 354-385 84-115 (116)
120 PF06379 RhaT: L-rhamnose-prot 68.1 80 0.0017 30.2 11.0 125 261-386 5-154 (344)
121 KOG4831 Unnamed protein [Funct 62.2 7.5 0.00016 30.2 2.5 59 326-384 65-124 (125)
122 PF06570 DUF1129: Protein of u 61.1 1.2E+02 0.0025 26.8 11.8 11 126-136 95-105 (206)
123 PF04342 DUF486: Protein of un 60.7 79 0.0017 24.7 9.5 51 199-249 56-107 (108)
124 PF07168 Ureide_permease: Urei 46.4 3.7 8.1E-05 38.2 -1.6 111 121-233 1-127 (336)
125 KOG2766 Predicted membrane pro 46.1 24 0.00052 32.3 3.4 139 112-252 162-301 (336)
126 COG4858 Uncharacterized membra 43.2 2.1E+02 0.0045 24.9 8.4 86 117-205 101-188 (226)
127 PRK13108 prolipoprotein diacyl 42.3 3.8E+02 0.0081 27.0 17.1 45 341-385 225-274 (460)
128 PF07168 Ureide_permease: Urei 35.5 53 0.0011 30.9 4.0 30 111-140 214-243 (336)
129 KOG3817 Uncharacterized conser 34.5 1.1E+02 0.0023 29.5 5.9 17 263-279 166-182 (452)
130 PF11139 DUF2910: Protein of u 34.3 3.2E+02 0.007 24.0 11.6 40 211-250 159-211 (214)
131 COG3086 RseC Positive regulato 31.4 75 0.0016 26.3 3.8 48 198-246 68-115 (150)
132 PF06570 DUF1129: Protein of u 30.5 1.3E+02 0.0029 26.4 5.8 18 117-134 112-129 (206)
133 PF04246 RseC_MucC: Positive r 30.4 65 0.0014 26.2 3.5 45 202-247 65-109 (135)
134 COG5373 Predicted membrane pro 30.3 7.4E+02 0.016 26.9 23.3 28 196-223 218-245 (931)
135 PF10225 DUF2215: Uncharacteri 30.0 4.3E+02 0.0094 24.1 9.9 38 335-372 117-154 (249)
136 COG3169 Uncharacterized protei 29.8 2.6E+02 0.0057 21.5 11.7 32 219-250 84-115 (116)
137 PF07331 TctB: Tripartite tric 29.6 3E+02 0.0065 22.1 13.2 30 193-229 83-112 (141)
138 PRK10862 SoxR reducing system 27.1 81 0.0018 26.5 3.6 23 201-223 71-93 (154)
139 PF00689 Cation_ATPase_C: Cati 27.0 3.8E+02 0.0082 22.5 9.8 87 142-228 4-111 (182)
140 COG3476 Tryptophan-rich sensor 26.1 4.1E+02 0.0088 22.6 9.4 60 324-383 62-122 (161)
141 PF09852 DUF2079: Predicted me 22.3 7.8E+02 0.017 24.5 11.8 120 142-279 57-187 (449)
142 PF02419 PsbL: PsbL protein; 22.1 2E+02 0.0044 17.7 3.6 25 108-132 11-35 (37)
143 PRK11715 inner membrane protei 21.9 8.1E+02 0.018 24.5 11.4 20 140-159 327-346 (436)
144 TIGR01167 LPXTG_anchor LPXTG-m 21.3 1.4E+02 0.0031 17.4 3.0 22 366-387 11-32 (34)
145 KOG3817 Uncharacterized conser 21.0 5.3E+02 0.011 25.0 7.8 81 128-213 201-286 (452)
146 TIGR02865 spore_II_E stage II 20.7 1.1E+03 0.024 25.5 13.9 157 204-382 10-192 (764)
147 PF04156 IncA: IncA protein; 20.5 1.1E+02 0.0023 26.5 3.2 14 236-249 14-27 (191)
148 PF05884 ZYG-11_interact: Inte 20.2 7.3E+02 0.016 23.3 13.5 43 196-239 182-224 (299)
No 1
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=3.2e-30 Score=242.73 Aligned_cols=260 Identities=26% Similarity=0.444 Sum_probs=219.1
Q ss_pred HHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 016434 118 WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQ 197 (389)
Q Consensus 118 ~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 197 (389)
.+.++...++||++++..|...++++|.+++++|+.++.++++++...++++. .+++++......|.++...++.++++
T Consensus 10 ~~~~~~~~~iWg~~~~~~K~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~ 88 (292)
T PRK11272 10 FGALFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLLRGHPL-PTLRQWLNAALIGLLLLAVGNGMVTV 88 (292)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCCC-CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999988877655443 34577888888888876777888899
Q ss_pred Hh-hcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHHHHHHHHHHH
Q 016434 198 GL-QRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMA 276 (389)
Q Consensus 198 al-~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~~l~aa~~~a 276 (389)
+. ++++++.++++.++.|+++++++.+ +|||+++++++|++++++|+.++..++.. +....|++++++++++|+
T Consensus 89 ~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~----~~~~~G~l~~l~a~~~~a 163 (292)
T PRK11272 89 AEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL----SGNPWGAILILIASASWA 163 (292)
T ss_pred HHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc----ccchHHHHHHHHHHHHHH
Confidence 99 9999999999999999999999985 69999999999999999999998754311 122359999999999999
Q ss_pred HHH-----------------HHHHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCh
Q 016434 277 VGT-----------------HMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSL 339 (389)
Q Consensus 277 ~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a 339 (389)
.+. .+..++..+.+.....+... ....+...|..+++.+++++++++.+|++++++.++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~ 239 (292)
T PRK11272 164 FGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLLSGERL----TALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRP 239 (292)
T ss_pred HHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHcCCcc----cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCH
Confidence 998 33444455544443332211 122366788899999999999999999999999999
Q ss_pred hHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccC
Q 016434 340 TKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 340 ~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 387 (389)
++++.+.++||+++++++++++||++++.+++|+++|+.|+++.++.+
T Consensus 240 ~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 240 ALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999987654
No 2
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=2.1e-30 Score=248.41 Aligned_cols=272 Identities=16% Similarity=0.185 Sum_probs=217.3
Q ss_pred hHHHHHHHHHHHHHHHhHHHHHHHhccC-cCHHHHHHHHHHHHHHHHHHHHHHhCC--CCC-CChhHHHHHHHHHHHHHH
Q 016434 114 MLLEWAVLVSPFFFWGTAMVAMKEVLPK-AGTFFVAAFRLIPAGLLLITFASSQGR--KLP-SGFNAWVSIFLFALVDAS 189 (389)
Q Consensus 114 ~~~g~l~l~~a~~~~~~~~~~~k~~~~~-~~p~~~~~~R~~~~~l~~~~~~~~~~~--~~~-~~~~~~~~~~~~g~~~~~ 189 (389)
+.+.++.+++..+.++...++.|.+.+. ++|..+.++|+.++.++++++++.+++ +.+ ..++++.++.+.|+++ .
T Consensus 11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g-~ 89 (358)
T PLN00411 11 EAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG-S 89 (358)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-H
Confidence 4557889999999999999999988875 899999999999999999998876543 222 2467778888899988 6
Q ss_pred HHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHH------cCCCCcHHHHHHHHHHHHHhHHhhccCCC---------
Q 016434 190 CFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALL------FGESIGLVGAGGLVLGVIGLLLLEAPAFD--------- 254 (389)
Q Consensus 190 ~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~------l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~--------- 254 (389)
.++.+++++++++++++++++.++.|+++.++++++ ++||+++++++|++++++|+.++...+..
T Consensus 90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~ 169 (358)
T PLN00411 90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPP 169 (358)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence 677899999999999999999999999999999999 69999999999999999999998753211
Q ss_pred -----------CCCccchhhhHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHhhcCccccccc
Q 016434 255 -----------ESNSSLWGSGEWWMLLAAQSMAVGT-------------------HMVIGGLPLMVISVLNHDPVYGESV 304 (389)
Q Consensus 255 -----------~~~~~~~~~G~~~~l~aa~~~a~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (389)
..+..+...|+++.++++++|++|+ .++.+++...+.....+........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~ 249 (358)
T PLN00411 170 YLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWI 249 (358)
T ss_pred cccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccce
Confidence 0111233559999999999999997 1233333344444443332111111
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Q 016434 305 KELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 384 (389)
Q Consensus 305 ~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~ 384 (389)
...+... ..++|.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|++|+++..
T Consensus 250 ~~~~~~~-~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~ 327 (358)
T PLN00411 250 IHFDITL-ITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVM 327 (358)
T ss_pred eccchHH-HHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 2234333 347777755 66899999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCC
Q 016434 385 FRGS 388 (389)
Q Consensus 385 ~~~~ 388 (389)
+.++
T Consensus 328 ~~~~ 331 (358)
T PLN00411 328 WGKA 331 (358)
T ss_pred hhhh
Confidence 7654
No 3
>PRK11689 aromatic amino acid exporter; Provisional
Probab=100.00 E-value=4.1e-30 Score=242.22 Aligned_cols=261 Identities=18% Similarity=0.163 Sum_probs=206.3
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 016434 116 LEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFL 195 (389)
Q Consensus 116 ~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (389)
++.++++++.++||.+++..|...++++|..+.++|+.++.++++++.. +++. ++..++.++.+.++..+++.++
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~~--~~~~---~~~~~~~~~~~~l~~~~~~~~~ 78 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTVG--FPRL---RQFPKRYLLAGGLLFVSYEICL 78 (295)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHcc--cccc---ccccHHHHHHHhHHHHHHHHHH
Confidence 4577899999999999999999999999999999999999998887631 1111 1222334455666667777777
Q ss_pred HHHhh----cCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCC------CccchhhhH
Q 016434 196 AQGLQ----RTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDES------NSSLWGSGE 265 (389)
Q Consensus 196 ~~al~----~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~------~~~~~~~G~ 265 (389)
+.+++ ++++.+++++.++.|+++++++++++|||+++++++|++++++|+.++..++.+.+ +......|+
T Consensus 79 ~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~ 158 (295)
T PRK11689 79 ALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSY 158 (295)
T ss_pred HHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHH
Confidence 77775 46888899999999999999999999999999999999999999999987652111 111224599
Q ss_pred HHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHHHHHH
Q 016434 266 WWMLLAAQSMAVGT---------------HMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVY 330 (389)
Q Consensus 266 ~~~l~aa~~~a~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~ 330 (389)
+++++++++|+.++ ....+++.+.+.....+. .....+...|..+++.+ ++++++|.+|
T Consensus 159 ~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~l~~~~-~~t~~~~~l~ 232 (295)
T PRK11689 159 GLAFIGAFIWAAYCNVTRKYARGKNGITLFFILTALALWIKYFLSPQ-----PAMVFSLPAIIKLLLAA-AAMGFGYAAW 232 (295)
T ss_pred HHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHhcC-----ccccCCHHHHHHHHHHH-HHHHHHHHHH
Confidence 99999999999998 122222333222222211 11235667788888888 6789999999
Q ss_pred HHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccC
Q 016434 331 FYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 331 ~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 387 (389)
++++|+.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++..+.+
T Consensus 233 ~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~ 289 (295)
T PRK11689 233 NVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT 289 (295)
T ss_pred HHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence 999999999999999999999999999999999999999999999999998776544
No 4
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.98 E-value=1.8e-29 Score=238.35 Aligned_cols=261 Identities=23% Similarity=0.340 Sum_probs=205.2
Q ss_pred HHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 016434 119 AVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQG 198 (389)
Q Consensus 119 l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 198 (389)
++.++++++||+++++.|...++++|..+.++|+.++++.+++++.+ ++ .+ +...+..|++.....+.+++.+
T Consensus 7 l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~~--~~--~~---~~~~~~~g~~~~~~~~~~~~~~ 79 (299)
T PRK11453 7 VLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVAR--PK--VP---LNLLLGYGLTISFGQFAFLFCA 79 (299)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhcC--CC--Cc---hHHHHHHHHHHHHHHHHHHHHH
Confidence 56788999999999999999999999999999999988776665422 11 11 2234444555445566677889
Q ss_pred hhc-CChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHHHHHHHHHHHH
Q 016434 199 LQR-TSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAV 277 (389)
Q Consensus 199 l~~-~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~~l~aa~~~a~ 277 (389)
+++ .+++.++++.++.|+++.+++++++|||++++++++++++++|+.++..++.++. .....|++++++++++|+.
T Consensus 80 ~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~--~~~~~G~~l~l~aal~~a~ 157 (299)
T PRK11453 80 INFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQ--HVAMLGFMLTLAAAFSWAC 157 (299)
T ss_pred HHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCc--chhHHHHHHHHHHHHHHHH
Confidence 998 5889999999999999999999999999999999999999999999986542221 2223599999999999999
Q ss_pred HH---------------------HHHHHHHHHHHHHHhhcCccc-ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016434 278 GT---------------------HMVIGGLPLMVISVLNHDPVY-GESVKELTSSDILALLYTSIFGSAISYGVYFYSAT 335 (389)
Q Consensus 278 ~~---------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~ 335 (389)
+. .+.++.+.........+.+.. ...+...+...|..++|+|+++++++|.+|+++++
T Consensus 158 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~ 237 (299)
T PRK11453 158 GNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLG 237 (299)
T ss_pred HHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98 011111111112222222110 01123457788999999999999999999999999
Q ss_pred cCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCC
Q 016434 336 KGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 388 (389)
Q Consensus 336 ~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~~ 388 (389)
+.++.+++.+.++||+++.+++++++||++++.+++|+++|++|+++..+.++
T Consensus 238 ~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 238 RYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 99999999999999999999999999999999999999999999999875543
No 5
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.97 E-value=1.7e-28 Score=231.28 Aligned_cols=259 Identities=16% Similarity=0.108 Sum_probs=197.4
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC-----CChhHHHHHHHHHHHH
Q 016434 113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLP-----SGFNAWVSIFLFALVD 187 (389)
Q Consensus 113 ~~~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~ 187 (389)
++.+|.+++++++++||.++++.|.. ++++|.++.++|+.++.+++.+++..+++... .+++++ .....+.++
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 82 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKI-FMLAVSAVL 82 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHH-HHHHHHHHH
Confidence 34578999999999999999999975 67999999999999999888777655432111 122332 334466777
Q ss_pred HHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHH
Q 016434 188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWW 267 (389)
Q Consensus 188 ~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~ 267 (389)
.+.++.++++|++++++++++++.++.|+++++++++++|||+++++|+|++++++|+.++..++. + ..++
T Consensus 83 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~-----~----~~~~ 153 (296)
T PRK15430 83 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG-----S----LPII 153 (296)
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC-----C----ccHH
Confidence 788899999999999999999999999999999999999999999999999999999999886431 1 1246
Q ss_pred HHHHHHHHHHHH------------HHHHHHHHHHHHHHhh----cCcccccccccCCHHHHHHHHHHHHHHHHHHHHHHH
Q 016434 268 MLLAAQSMAVGT------------HMVIGGLPLMVISVLN----HDPVYGESVKELTSSDILALLYTSIFGSAISYGVYF 331 (389)
Q Consensus 268 ~l~aa~~~a~~~------------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~ 331 (389)
+++++++|+.|. ..........+..... ..+.. ......+...+..+++.| +.+.++|.+|+
T Consensus 154 ~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g-~~t~i~~~~~~ 231 (296)
T PRK15430 154 ALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADSST-SHMGQNPMSLNLLLIAAG-IVTTVPLLCFT 231 (296)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHccCCc-ccccCCcHHHHHHHHHHH-HHHHHHHHHHH
Confidence 888999999988 1122222122221111 11110 011111122334344445 46889999999
Q ss_pred HHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Q 016434 332 YSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 384 (389)
Q Consensus 332 ~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~ 384 (389)
+++++.++++++++.+++|+++.+++++++||++++.+++|+++|+.|+.++.
T Consensus 232 ~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~ 284 (296)
T PRK15430 232 AAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV 284 (296)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988877665
No 6
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.97 E-value=3.4e-28 Score=228.95 Aligned_cols=258 Identities=19% Similarity=0.198 Sum_probs=208.5
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHH
Q 016434 113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ 192 (389)
Q Consensus 113 ~~~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 192 (389)
++.+++.+++++.++|+.++.+.|...++++|.++.++|++++.++++++...++. +.++++++..+..|++. ...+
T Consensus 9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~--~~~~~~~~~~~~~g~~~-~~~~ 85 (293)
T PRK10532 9 PVWLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRL--RFAKEQRLPLLFYGVSL-GGMN 85 (293)
T ss_pred ccchHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhc--cCCHHHHHHHHHHHHHH-HHHH
Confidence 34678999999999999999999999999999999999999999998877644332 23457777788888875 5666
Q ss_pred HHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHHHHHHH
Q 016434 193 GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAA 272 (389)
Q Consensus 193 ~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~~l~aa 272 (389)
.++++++++++++.++++.++.|+++.+++ +||+.. ..++.++++|++++..++.+.++. ...|++++++++
T Consensus 86 ~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~--~~~G~ll~l~aa 157 (293)
T PRK10532 86 YLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQDVSHV--DLTGAALALGAG 157 (293)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCCcccC--ChHHHHHHHHHH
Confidence 789999999999999999999999999887 366554 455678899999987554222222 235999999999
Q ss_pred HHHHHHH-----------------HHHHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016434 273 QSMAVGT-----------------HMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSAT 335 (389)
Q Consensus 273 ~~~a~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~ 335 (389)
++|+.+. ..+++++.+.+....... ....+...|..++++|++++.++|.+|+++++
T Consensus 158 ~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~ 231 (293)
T PRK10532 158 ACWAIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAG------EALWHWSILPLGLAVAILSTALPYSLEMIALT 231 (293)
T ss_pred HHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHccC------cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 233344444443333221 11235566777789999999999999999999
Q ss_pred cCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccC
Q 016434 336 KGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 336 ~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 387 (389)
+.++++++.+.++||+++.+++++++||++++.+++|+++|++|++...+.+
T Consensus 232 ~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 232 RLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI 283 (293)
T ss_pred hcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999987543
No 7
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.97 E-value=9e-28 Score=222.32 Aligned_cols=238 Identities=27% Similarity=0.371 Sum_probs=202.7
Q ss_pred HHhHHHHHHHhcc-CcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCChhH
Q 016434 128 WGTAMVAMKEVLP-KAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGL 206 (389)
Q Consensus 128 ~~~~~~~~k~~~~-~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~ 206 (389)
||.+++..|...+ ..|+.++.+.|+..+.+++.++...+ ++++++++.+..|.++..+++.++++|++++++++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~ 75 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGE 75 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh
Confidence 8899999999876 47899999999999988888776544 34467778888999888999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHH-------
Q 016434 207 GSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGT------- 279 (389)
Q Consensus 207 a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~------- 279 (389)
++++.++.|+++++++.+++|||+++++++|++++++|+.++..++ + .+....|+.++++++++|+.+.
T Consensus 76 ~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~-~---~~~~~~G~~~~l~a~~~~a~~~~~~k~~~ 151 (260)
T TIGR00950 76 AALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG-N---LSINPAGLLLGLGSGISFALGTVLYKRLV 151 (260)
T ss_pred hHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC-c---ccccHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 9999999999999999999999999999999999999999987654 1 1233569999999999999999
Q ss_pred -------------HHHHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHhhh
Q 016434 280 -------------HMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLT 346 (389)
Q Consensus 280 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~~s~~~ 346 (389)
.+..+.+.+.+.....++. ...+...|..+++.+++++.++|.+|++++++.++++++.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~ 225 (260)
T TIGR00950 152 KKEGPELLQFTGWVLLLGALLLLPFAWFLGPN------PQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILA 225 (260)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC------CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence 1334444444444333221 123567788889999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 016434 347 FLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAI 380 (389)
Q Consensus 347 ~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~ 380 (389)
+++|+++.+++++++||++++.+++|.++++.|+
T Consensus 226 ~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 226 LAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999886
No 8
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.95 E-value=1e-25 Score=210.89 Aligned_cols=257 Identities=19% Similarity=0.226 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHh--CCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 016434 118 WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQ--GRKLPSGFNAWVSIFLFALVDASCFQGFL 195 (389)
Q Consensus 118 ~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (389)
.++.++++++|+..+...|...++.++. .++++....+++.++...+ +...+..+++++..++.+.++...++.++
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGL 80 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999666654443 4677777777777777654 23333334555656666666678888999
Q ss_pred HHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHHHHHHHHHH
Q 016434 196 AQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSM 275 (389)
Q Consensus 196 ~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~~l~aa~~~ 275 (389)
++++++++++.++++.++.|+++++++++++|||+++++|+|+++++.|+.++..++.+. ....|+.++++++++|
T Consensus 81 ~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~----~~~~g~~~~l~aal~~ 156 (281)
T TIGR03340 81 AQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQ----HRRKAYAWALAAALGT 156 (281)
T ss_pred HHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccc----cchhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988654221 1234888999999999
Q ss_pred HHHH------------------HHHHHHHHH-HHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 016434 276 AVGT------------------HMVIGGLPL-MVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATK 336 (389)
Q Consensus 276 a~~~------------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~ 336 (389)
+.|. ...++.+.. .+......... ......+...+..+++.+.+++.++|.+|++++++
T Consensus 157 a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~l~~~l~~~al~~ 234 (281)
T TIGR03340 157 AIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRH--GRSMFPYARQILPSATLGGLMIGGAYALVLWAMTR 234 (281)
T ss_pred HHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHh--ccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9987 011111111 12211111000 00011123345566778889999999999999999
Q ss_pred CChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Q 016434 337 GSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYL 382 (389)
Q Consensus 337 ~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l 382 (389)
.++++++.+.+++|+++.+++++++||+++..+++|+++|+.|+++
T Consensus 235 ~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 235 LPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred CCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 9999999999999999999999999999999999999999999876
No 9
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.95 E-value=3.6e-25 Score=212.88 Aligned_cols=262 Identities=14% Similarity=0.122 Sum_probs=200.1
Q ss_pred HHHHHHHHHHHhHHHHHHHhccCcC-HHHHHHHHHHHHHHHHHHHHHHhCCCCC-C--ChhHHHHHHHHHHHHHHHHHHH
Q 016434 119 AVLVSPFFFWGTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRKLP-S--GFNAWVSIFLFALVDASCFQGF 194 (389)
Q Consensus 119 l~l~~a~~~~~~~~~~~k~~~~~~~-p~~~~~~R~~~~~l~~~~~~~~~~~~~~-~--~~~~~~~~~~~g~~~~~~~~~~ 194 (389)
++.+.-..+-.......|.+++.++ |..++.+|++++.+++..++....++.+ . .+++++..+..|+++... +..
T Consensus 52 ~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~~-~~~ 130 (350)
T PTZ00343 52 LLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFV-HFG 130 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHH
Confidence 3333333333444578999999999 9999999999998876655443222211 2 235677888888888555 556
Q ss_pred HHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHHHHHHHHH
Q 016434 195 LAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQS 274 (389)
Q Consensus 195 ~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~~l~aa~~ 274 (389)
.+.|+++++++.++++.+++|+++++++++++|||++++++++++++++|+.+....+ .+....|++++++++++
T Consensus 131 ~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~-----~~~~~~G~~~~l~s~~~ 205 (350)
T PTZ00343 131 AVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKE-----LHFTWLAFWCAMLSNLG 205 (350)
T ss_pred HHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheeccc-----chhHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999988643 12224599999999999
Q ss_pred HHHHH-------------------------HHHHHHHHHHHHHHhhcCccccccc----ccCCHHHHHHHHHHHHHHHHH
Q 016434 275 MAVGT-------------------------HMVIGGLPLMVISVLNHDPVYGESV----KELTSSDILALLYTSIFGSAI 325 (389)
Q Consensus 275 ~a~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~g~~~~~l 325 (389)
++.++ ...++.+.++|+....+.......+ ...+...+..+++ .++.+++
T Consensus 206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l 284 (350)
T PTZ00343 206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGV 284 (350)
T ss_pred HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHH-HHHHHHH
Confidence 99998 1345666666666544432111000 0111112222333 3466788
Q ss_pred HHHHHHH----HhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccC
Q 016434 326 SYGVYFY----SATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 326 ~~~l~~~----al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 387 (389)
++++++. ++++.+|.+.++..+++|+++++++++++||++++.+++|++++++|++++++-|
T Consensus 285 ~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k 350 (350)
T PTZ00343 285 WYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK 350 (350)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence 9999985 9999999999999999999999999999999999999999999999999998754
No 10
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.95 E-value=3.2e-29 Score=219.49 Aligned_cols=266 Identities=17% Similarity=0.135 Sum_probs=209.1
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHH
Q 016434 113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ 192 (389)
Q Consensus 113 ~~~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 192 (389)
+..+|.+++.++.++..++.+..|. . ..+|.++.-.|+++..++..|..++.+.....+.+.+.+++++|+.+.++.+
T Consensus 35 ~p~~gl~l~~vs~ff~~~~vv~t~~-~-e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvm 112 (346)
T KOG4510|consen 35 KPNLGLLLLTVSYFFNSCMVVSTKV-L-ENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVM 112 (346)
T ss_pred CCccCceehhhHHHHhhHHHhhhhh-h-ccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHH
Confidence 3345677787785555555555553 3 4789999999999988888888888776664455677788899999866665
Q ss_pred HHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCC------CC---CCccchhh
Q 016434 193 GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAF------DE---SNSSLWGS 263 (389)
Q Consensus 193 ~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~------~~---~~~~~~~~ 263 (389)
+.|||++|++.++|++|.+++|+|+.+++|+++|||+++.+.++.++.+.||+++.+|.. ++ .+.+....
T Consensus 113 -lmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~ 191 (346)
T KOG4510|consen 113 -LMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIP 191 (346)
T ss_pred -HHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCC
Confidence 779999999999999999999999999999999999999999999999999999999972 11 11122345
Q ss_pred hHHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHH
Q 016434 264 GEWWMLLAAQSMAVGT------------------HMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI 325 (389)
Q Consensus 264 G~~~~l~aa~~~a~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l 325 (389)
|...++.++++.+-.. ..+++.+..++.....+.. ..+..+.+|+.++.+|++ +.+
T Consensus 192 gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~-----~lP~cgkdr~l~~~lGvf-gfi 265 (346)
T KOG4510|consen 192 GTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAV-----QLPHCGKDRWLFVNLGVF-GFI 265 (346)
T ss_pred chHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccce-----ecCccccceEEEEEehhh-hhH
Confidence 6666666665544333 4455555555444444422 235567788888889954 566
Q ss_pred HHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccC
Q 016434 326 SYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 326 ~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 387 (389)
++.+.++++|++.|..++++.+++.++|.++++++||+.|+++.|+|+++|+.+.++..+.|
T Consensus 266 gQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k 327 (346)
T KOG4510|consen 266 GQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK 327 (346)
T ss_pred HHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999887644
No 11
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.94 E-value=5.4e-25 Score=203.37 Aligned_cols=231 Identities=16% Similarity=0.118 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCC------CC-CChhH-HHHHHHHHHHH
Q 016434 116 LEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRK------LP-SGFNA-WVSIFLFALVD 187 (389)
Q Consensus 116 ~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~------~~-~~~~~-~~~~~~~g~~~ 187 (389)
+|++++++++++||+++++.|. ..+++|.++.++|++++.+++.+++..++++ .+ .++++ +....+.|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~- 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL- 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH-
Confidence 4788999999999999999998 4569999999999999998887766443321 11 11223 2334555555
Q ss_pred HHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHH
Q 016434 188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWW 267 (389)
Q Consensus 188 ~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~ 267 (389)
...++.++++|++++++++++++.++.|+++++++++++|||++++++++++++++|+.++..++. +. .++
T Consensus 80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~-----~~----~~~ 150 (256)
T TIGR00688 80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG-----SL----PWE 150 (256)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC-----Cc----hHH
Confidence 578889999999999999999999999999999999999999999999999999999999876431 11 145
Q ss_pred HHHHHHHHHHHH------------HHHHHHHHHHHHHHh---hcCcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 016434 268 MLLAAQSMAVGT------------HMVIGGLPLMVISVL---NHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFY 332 (389)
Q Consensus 268 ~l~aa~~~a~~~------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~ 332 (389)
+++++++|+.|. ....+.....+.... ...+.. .........|..+++.|++ +.++|.++++
T Consensus 151 ~l~aa~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~ 227 (256)
T TIGR00688 151 ALVLAFSFTAYGLIRKALKNTDLAGFCLETLSLMPVAIYYLLQTDFAT--VQQTNPFPIWLLLVLAGLI-TGTPLLAFVI 227 (256)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHHHHHHhccCc--ccccCchhHHHHHHHHHHH-HHHHHHHHHH
Confidence 788999999988 223333333333321 111110 0011122478888888865 8899999999
Q ss_pred HhccCChhHHHhhhhhHHHHHHHHHHHH
Q 016434 333 SATKGSLTKLSSLTFLTPMFASIFGFLY 360 (389)
Q Consensus 333 al~~~~a~~~s~~~~~~pv~a~i~~~~~ 360 (389)
++++.++++++++.|+||+++.++++++
T Consensus 228 a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 228 AANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999764
No 12
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.94 E-value=2.4e-24 Score=203.86 Aligned_cols=252 Identities=15% Similarity=0.121 Sum_probs=192.1
Q ss_pred HHHHHHHhccC-cCHHHHHHHHHHHHHHHHHHHHHH-hCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHH
Q 016434 131 AMVAMKEVLPK-AGTFFVAAFRLIPAGLLLITFASS-QGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGS 208 (389)
Q Consensus 131 ~~~~~k~~~~~-~~p~~~~~~R~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ 208 (389)
..+.+|.+.++ ..|..+++.|+.++.+...+.+.. .+++.+.++++++.++..|++. +.++.+.++++++++++.++
T Consensus 17 ~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~l~~~s~s~~~ 95 (302)
T TIGR00817 17 FNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVH-TIGHVTSNVSLSKVAVSFTH 95 (302)
T ss_pred HHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhccHHHHH
Confidence 33689999988 459999999999998876665322 2233445678899999999996 77889999999999999999
Q ss_pred HHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHH---------
Q 016434 209 VIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGT--------- 279 (389)
Q Consensus 209 ~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~--------- 279 (389)
++.++.|+++++++++++|||++++++++++++++|+.+....+ .+....|++++++++++|+++.
T Consensus 96 li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~-----~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~ 170 (302)
T TIGR00817 96 TIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE-----LSFNWAGFLSAMISNITFVSRNIFSKKAMTI 170 (302)
T ss_pred HHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc-----ccccHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999998765322 1122359999999999999987
Q ss_pred -----------HHHHHHHHHHHHHHhhcCccccc-cccc----CCH-HHHHHHHHHHHHHHHHHHHHHHHHhccCChhHH
Q 016434 280 -----------HMVIGGLPLMVISVLNHDPVYGE-SVKE----LTS-SDILALLYTSIFGSAISYGVYFYSATKGSLTKL 342 (389)
Q Consensus 280 -----------~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~-~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~~ 342 (389)
.+.++.+.+.+.....++..... .... ... ..+...+..+..+....+.+++.++++.+|.++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~ 250 (302)
T TIGR00817 171 KSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTH 250 (302)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHH
Confidence 34556666777665544322100 0000 011 112112222222222233455689999999999
Q ss_pred HhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCC
Q 016434 343 SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 388 (389)
Q Consensus 343 s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~~ 388 (389)
++..+++|+++++++++++||+++..+++|++++++|++++++.|+
T Consensus 251 sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~ 296 (302)
T TIGR00817 251 SVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA 296 (302)
T ss_pred HHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999997553
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.93 E-value=1.7e-22 Score=189.33 Aligned_cols=272 Identities=30% Similarity=0.421 Sum_probs=211.6
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhccC-cCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 016434 115 LLEWAVLVSPFFFWGTAMVAMKEVLPK-AGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQG 193 (389)
Q Consensus 115 ~~g~l~l~~a~~~~~~~~~~~k~~~~~-~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 193 (389)
..+....++..+.|+......|...++ .++....+.|...+.+...+....++.......+.+++..+.+.++...++.
T Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (292)
T COG0697 6 LLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFL 85 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHH
Confidence 456677888889999999999988887 6677777889999988844444333211222223355677777777888999
Q ss_pred HHHHHhhcCChhHHHHHHhhHHHHHHHHHH-HHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHHHHHHH
Q 016434 194 FLAQGLQRTSAGLGSVIIDSQPLSVAVLAA-LLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAA 272 (389)
Q Consensus 194 ~~~~al~~~~~~~a~~i~~~~Pv~~~lla~-l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~~l~aa 272 (389)
+++.++++++++.++.+.++.|+++.++++ ++++||+++.+++++++++.|+.++..++...... ...|++++++++
T Consensus 86 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~--~~~g~~~~l~a~ 163 (292)
T COG0697 86 LLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGIL--SLLGLLLALAAA 163 (292)
T ss_pred HHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhH--HHHHHHHHHHHH
Confidence 999999999999999999999999999997 77799999999999999999999999987333322 457999999999
Q ss_pred HHHHHHH----------HHHHHH-HHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhH
Q 016434 273 QSMAVGT----------HMVIGG-LPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTK 341 (389)
Q Consensus 273 ~~~a~~~----------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~ 341 (389)
++++.+. ...... ....................+.+...|..+.+.|++++++++.++++++++.++.+
T Consensus 164 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~ 243 (292)
T COG0697 164 LLWALYTALVKRLSRLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASL 243 (292)
T ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH
Confidence 9999887 000000 01000111100000000013456778888999999999899999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCC
Q 016434 342 LSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 388 (389)
Q Consensus 342 ~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~~ 388 (389)
++.+.+++|+++.+++++++||+++..+++|+++++.|+++..++++
T Consensus 244 ~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 290 (292)
T COG0697 244 VALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRAR 290 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999999987654
No 14
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.92 E-value=1e-22 Score=191.48 Aligned_cols=263 Identities=17% Similarity=0.134 Sum_probs=210.2
Q ss_pred HHHHHHHHhHHHHHHHhccCcC-HHHHHHHHHHHHHHHHHHHHHHhCCC---CCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 016434 122 VSPFFFWGTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRK---LPSGFNAWVSIFLFALVDASCFQGFLAQ 197 (389)
Q Consensus 122 ~~a~~~~~~~~~~~k~~~~~~~-p~~~~~~R~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 197 (389)
+++.+.-+++.....+..++.+ |...+++.++.-.++..++..+++.. ....+++++++++.+++...++ .+.+.
T Consensus 20 ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN-~~~v~ 98 (334)
T PF06027_consen 20 VLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEAN-YLVVL 98 (334)
T ss_pred HHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHH-HHHHH
Confidence 4555555555555555555666 88999999988888887777666433 1234478889999999986555 58899
Q ss_pred HhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCC----CCccchhhhHHHHHHHHH
Q 016434 198 GLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDE----SNSSLWGSGEWWMLLAAQ 273 (389)
Q Consensus 198 al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~----~~~~~~~~G~~~~l~aa~ 273 (389)
|++||+.+.++++..+..+++++++++++|||+++.+++|++++++|++++...+... ++.++...||++++++++
T Consensus 99 a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~ 178 (334)
T PF06027_consen 99 AYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAI 178 (334)
T ss_pred HhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999887222 234466789999999999
Q ss_pred HHHHHH------------------HHHHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016434 274 SMAVGT------------------HMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSAT 335 (389)
Q Consensus 274 ~~a~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~ 335 (389)
+||+++ ..+++.++..+...+.+..... ...++.+.+..++..+ ++..+-|.+....++
T Consensus 179 lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~--~~~w~~~~~~~~v~~~-~~lf~~y~l~p~~l~ 255 (334)
T PF06027_consen 179 LYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIE--SIHWTSQVIGLLVGYA-LCLFLFYSLVPIVLR 255 (334)
T ss_pred HHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhh--ccCCChhhHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 999999 4456667776666666655442 2234555555444443 566778888889999
Q ss_pred cCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCC
Q 016434 336 KGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 388 (389)
Q Consensus 336 ~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~~ 388 (389)
+.+|+...+-..+..+++++++++++|+.+++..++|.++|+.|.+++...++
T Consensus 256 ~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~ 308 (334)
T PF06027_consen 256 MSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAES 308 (334)
T ss_pred hCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCC
Confidence 99999999999999999999999999999999999999999999999987543
No 15
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.91 E-value=1.1e-21 Score=171.43 Aligned_cols=251 Identities=21% Similarity=0.250 Sum_probs=212.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 016434 117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA 196 (389)
Q Consensus 117 g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 196 (389)
.++.++.+++.--....+.|.....+++...+.+|..+++++++.+.+..+++ ..++++...+.+|... ...|.+||
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP~vG~~g~t~lRl~~aaLIll~l~RPwr~r--~~~~~~~~~~~yGvsL-g~MNl~FY 89 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFPLVGAAGVTALRLAIAALILLALFRPWRRR--LSKPQRLALLAYGVSL-GGMNLLFY 89 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHccccChhhHHHHHHHHHHHHHHHHhhHHHhc--cChhhhHHHHHHHHHH-HHHHHHHH
Confidence 57788888888888889999999999999999999999999999988766543 4558889999999987 56667999
Q ss_pred HHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHHHHHHHHHHH
Q 016434 197 QGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMA 276 (389)
Q Consensus 197 ~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~~l~aa~~~a 276 (389)
.+++++|.+.+..+.|+.|+.+++++ .-+.++.+-+.+++.|+.++.-.+.+.+..+ ..|..+++.++.||+
T Consensus 90 ~si~riPlGiAVAiEF~GPL~vA~~~------sRr~~d~vwvaLAvlGi~lL~p~~~~~~~lD--p~Gv~~Al~AG~~Wa 161 (292)
T COG5006 90 LSIERIPLGIAVAIEFTGPLAVALLS------SRRLRDFVWVALAVLGIWLLLPLGQSVWSLD--PVGVALALGAGACWA 161 (292)
T ss_pred HHHHhccchhhhhhhhccHHHHHHHh------ccchhhHHHHHHHHHHHHhheeccCCcCcCC--HHHHHHHHHHhHHHH
Confidence 99999999999999999999998876 3455666667788889888876543444444 459999999999999
Q ss_pred HHH------------------HHHHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 016434 277 VGT------------------HMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGS 338 (389)
Q Consensus 277 ~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~ 338 (389)
.|. .+.+++++.+|+......+. -.++.....-+..+++++++.|.+.+.+++|.+
T Consensus 162 ~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~------l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp 235 (292)
T COG5006 162 LYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPA------LFSPSLLPLALGVAVLSSALPYSLEMIALRRLP 235 (292)
T ss_pred HHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchh------hcChHHHHHHHHHHHHhcccchHHHHHHHhhCC
Confidence 999 67777777777776544433 346667777778899999999999999999999
Q ss_pred hhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Q 016434 339 LTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 384 (389)
Q Consensus 339 a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~ 384 (389)
+...+.+..+||.++.+.|++++||++++.||+|.+.|+++..-..
T Consensus 236 ~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~ 281 (292)
T COG5006 236 ARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGST 281 (292)
T ss_pred hhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999998877443
No 16
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.89 E-value=1e-20 Score=169.78 Aligned_cols=260 Identities=17% Similarity=0.160 Sum_probs=209.1
Q ss_pred hHHHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCC-----CCChhHHHHHHHHHHHHH
Q 016434 114 MLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKL-----PSGFNAWVSIFLFALVDA 188 (389)
Q Consensus 114 ~~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~ 188 (389)
..+|+++.+.+-++||......|. .+..++.++...|.+.+..+++......|+.. .++++.+....+.+.+ .
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kl-l~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i 82 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKL-LEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I 82 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHH-HccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence 356899999999999999999995 67799999999999999998877766554432 2344556665655555 5
Q ss_pred HHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHHH
Q 016434 189 SCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWM 268 (389)
Q Consensus 189 ~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~~ 268 (389)
..++..|.+|..+..+-++++=++..|++.++++.+|+|||+++.|+++++++.+||....... + + =-..+
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~---g--~----lpwva 153 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL---G--S----LPWVA 153 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc---C--C----CcHHH
Confidence 8999999999999999999999999999999999999999999999999999999999988643 1 1 12455
Q ss_pred HHHHHHHHHHH------------HHHHHHHHHHHHHHhhcCcccccc--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016434 269 LLAAQSMAVGT------------HMVIGGLPLMVISVLNHDPVYGES--VKELTSSDILALLYTSIFGSAISYGVYFYSA 334 (389)
Q Consensus 269 l~aa~~~a~~~------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al 334 (389)
+.-++.|+.|. .+.+-...+.|.++...-...... ....+...+..++..| ..|+++..++..+-
T Consensus 154 l~la~sf~~Ygl~RK~~~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG-~vTavpL~lf~~aa 232 (293)
T COG2962 154 LALALSFGLYGLLRKKLKVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAG-LVTAVPLLLFAAAA 232 (293)
T ss_pred HHHHHHHHHHHHHHHhcCCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhh-HHHHHHHHHHHHHH
Confidence 66778888888 444445555555443221110001 1223566677777788 66888999999999
Q ss_pred ccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Q 016434 335 TKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 385 (389)
Q Consensus 335 ~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~ 385 (389)
|+.+-+..+.++|.+|..-.+++++++||+++..+++..++|..|++++..
T Consensus 233 ~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~ 283 (293)
T COG2962 233 KRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSI 283 (293)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998864
No 17
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.88 E-value=4.9e-20 Score=172.90 Aligned_cols=257 Identities=18% Similarity=0.173 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 016434 117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA 196 (389)
Q Consensus 117 g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 196 (389)
++++.++++++||+..+..|... +.++.++. |..++.+++..+....+.+....++.+...++.|.+ ...++.+++
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~l~G~~-w~ig~~~~~ 77 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG-GGPYSQTL--GTTFGALILSIAIAIFVLPEFWALSIFLVGLLSGAF-WALGQINQF 77 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC-CCHHHHHH--HHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHH-HHhhhhhHH
Confidence 46788999999999999999766 66666664 777777776655444433222223444445555555 477778999
Q ss_pred HHhhcCChhHHHHHHh-hHHHHHHHHHHHHcCCCCcHHH----HHHHHHHHHHhHHhhccCCCCCC-c--cchhhhHHHH
Q 016434 197 QGLQRTSAGLGSVIID-SQPLSVAVLAALLFGESIGLVG----AGGLVLGVIGLLLLEAPAFDESN-S--SLWGSGEWWM 268 (389)
Q Consensus 197 ~al~~~~~~~a~~i~~-~~Pv~~~lla~l~l~Er~~~~~----~~g~~l~~~Gv~ll~~~~~~~~~-~--~~~~~G~~~~ 268 (389)
.+.++++++.+..+.. +.++++.+++.+++|||.++.+ ++|++++++|+.++...+.+... . ....+|..++
T Consensus 78 ~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~ 157 (290)
T TIGR00776 78 KSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLL 157 (290)
T ss_pred HHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHH
Confidence 9999999999999977 8999999999999999999999 99999999999998775422111 0 2236799999
Q ss_pred HHHHHHHHHHH-------------------HHHHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHHHHH
Q 016434 269 LLAAQSMAVGT-------------------HMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGV 329 (389)
Q Consensus 269 l~aa~~~a~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l 329 (389)
++++++|+.|. .+++++....... ... .+...+.+...+..|++ ..+++.+
T Consensus 158 l~sg~~y~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~-------~~~~~~~~~~~~~~Gi~-~~ia~~~ 227 (290)
T TIGR00776 158 LMSTIGYLVYVVVAKAFGVDGLSVLLPQAIGMVIGGIIFNLGH--ILA-------KPLKKYAILLNILPGLM-WGIGNFF 227 (290)
T ss_pred HHHHHHHHHHHHHHHHcCCCcceehhHHHHHHHHHHHHHHHHH--hcc-------cchHHHHHHHHHHHHHH-HHHHHHH
Confidence 99999999988 1122222222111 000 11233333334447866 7999999
Q ss_pred HHHHhc-cCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHH----HHHHHHHHHHHHhhccC
Q 016434 330 YFYSAT-KGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQL----VGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 330 ~~~al~-~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~----~G~~lIi~g~~l~~~~~ 387 (389)
|..+.+ +.+++.+..+.+.||+.+.+++++++||..++.++ +|.++|+.|+.+....|
T Consensus 228 y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~~ 290 (290)
T TIGR00776 228 YLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIGK 290 (290)
T ss_pred HHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhccC
Confidence 999999 99999999999999999999999999999999999 99999999999987654
No 18
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.76 E-value=2.3e-17 Score=152.09 Aligned_cols=275 Identities=17% Similarity=0.134 Sum_probs=208.3
Q ss_pred chhhHHHHHHHHHHHHHHHhHHHHHHHhccCcC---HHHHHHHHHHHHHHHHHHHH------HHh-CC------------
Q 016434 111 ELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAG---TFFVAAFRLIPAGLLLITFA------SSQ-GR------------ 168 (389)
Q Consensus 111 ~~~~~~g~l~l~~a~~~~~~~~~~~k~~~~~~~---p~~~~~~R~~~~~l~~~~~~------~~~-~~------------ 168 (389)
..+...|+.++++..++|-...-+++...++.+ |+.+++.....-.+.+.++. +.. ++
T Consensus 9 ~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~ 88 (416)
T KOG2765|consen 9 RWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEA 88 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhh
Confidence 345678999999999999999999998887644 88887776555555444422 100 00
Q ss_pred -------------------------------------------------CCCCChh------------HHHHH-HHHHHH
Q 016434 169 -------------------------------------------------KLPSGFN------------AWVSI-FLFALV 186 (389)
Q Consensus 169 -------------------------------------------------~~~~~~~------------~~~~~-~~~g~~ 186 (389)
+.+.+.| +..++ +....+
T Consensus 89 d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~l 168 (416)
T KOG2765|consen 89 DAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPL 168 (416)
T ss_pred hhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHH
Confidence 0000111 22333 334444
Q ss_pred HHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCC---CCCCccchhh
Q 016434 187 DASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAF---DESNSSLWGS 263 (389)
Q Consensus 187 ~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~---~~~~~~~~~~ 263 (389)
. +..+..+..|+++++++..+++..+.-+|+.+++.++.+||+++.+.++++++++||+++...+. +.........
T Consensus 169 W-F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~ll 247 (416)
T KOG2765|consen 169 W-FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLL 247 (416)
T ss_pred H-HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhH
Confidence 4 66677999999999999999999999999999999999999999999999999999999998762 2223344567
Q ss_pred hHHHHHHHHHHHHHHH----------------HHHHHH------HHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHH
Q 016434 264 GEWWMLLAAQSMAVGT----------------HMVIGG------LPLMVISVLNHDPVYGESVKELTSSDILALLYTSIF 321 (389)
Q Consensus 264 G~~~~l~aa~~~a~~~----------------~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 321 (389)
|+++++++|+.||+|. .+++|. +++.|..++..... .+.+..++..+...++..+++
T Consensus 248 G~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~-~e~F~lP~~~q~~~vv~~~li 326 (416)
T KOG2765|consen 248 GNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFG-EERFELPSSTQFSLVVFNNLI 326 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhc-cCcccCCCCceeEeeeHhhHH
Confidence 9999999999999999 333333 22232222222211 123334455666667778889
Q ss_pred HHHHHHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccC
Q 016434 322 GSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 322 ~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 387 (389)
+++++-++|.+|.-..++..+.+.+.++.+++++.+.++-|..+++.+++|.+.|.+|.+++++..
T Consensus 327 gtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 327 GTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred HHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 999999999999999999999999999999999999999999999999999999999999998754
No 19
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.75 E-value=2.1e-15 Score=142.72 Aligned_cols=243 Identities=18% Similarity=0.159 Sum_probs=188.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHH
Q 016434 143 GTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLA 222 (389)
Q Consensus 143 ~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla 222 (389)
.|..+++.++....+...+.....+. .+.++..++.++..+++. .++..+.+.|++|++...-.++....|+++++++
T Consensus 31 ~~~~lt~~q~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~ 108 (303)
T PF08449_consen 31 FPLFLTFVQFAFNALFSFILLSLFKF-PKSRKIPLKKYAILSFLF-FLASVLSNAALKYISYPTQIVFKSSKPIPVMILG 108 (303)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhccc-cCCCcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHH
Confidence 38999999999999888777766552 223335566677777776 6666799999999999999999999999999999
Q ss_pred HHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCc-----cchhhhHHHHHHHHHHHHHHH------------------
Q 016434 223 ALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNS-----SLWGSGEWWMLLAAQSMAVGT------------------ 279 (389)
Q Consensus 223 ~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~-----~~~~~G~~~~l~aa~~~a~~~------------------ 279 (389)
.+++|+|+++.+++++++..+|+.+....+...+.. .....|+.+.+++.++.+...
T Consensus 109 ~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~m 188 (303)
T PF08449_consen 109 VLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELM 188 (303)
T ss_pred HHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHH
Confidence 999999999999999999999999999876222111 112339999999999999888
Q ss_pred --HHHHHHHHHHHHHHh--hcCcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHhhhhhHHHHHHH
Q 016434 280 --HMVIGGLPLMVISVL--NHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASI 355 (389)
Q Consensus 280 --~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~i 355 (389)
...++.+...+.... .++..........++..+..++... ++..+++...+...++.++...+++..+.-+++++
T Consensus 189 fy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s-~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sil 267 (303)
T PF08449_consen 189 FYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFS-LTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSIL 267 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHH
Confidence 233444444444444 2222111122233455555555555 66777888888899999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCC
Q 016434 356 FGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 388 (389)
Q Consensus 356 ~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~~ 388 (389)
++++++|+++++.+|+|.++++.|..++.+.|+
T Consensus 268 lS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~ 300 (303)
T PF08449_consen 268 LSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKK 300 (303)
T ss_pred HHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhc
Confidence 999999999999999999999999999987654
No 20
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.68 E-value=3.7e-16 Score=122.81 Aligned_cols=133 Identities=20% Similarity=0.224 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCC---ChhHHHHHHHHHHHHHHHHHH
Q 016434 117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPS---GFNAWVSIFLFALVDASCFQG 193 (389)
Q Consensus 117 g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~ 193 (389)
..++.++++++++...++.|...+++||...+++|.++...++..++...++.... +.|.|..+++.|+.+ ..++.
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-glswl 82 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLSWL 82 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHHHH
Confidence 46788999999999999999999999999999999999999999998888765544 668888888888665 88889
Q ss_pred HHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhc
Q 016434 194 FLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA 250 (389)
Q Consensus 194 ~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~ 250 (389)
+||+|++...++....+..++|+++++++++++|||++..+|+|++++.+|++++..
T Consensus 83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 999999999999999999999999999999999999999999999999999998764
No 21
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.63 E-value=5.8e-17 Score=141.84 Aligned_cols=256 Identities=15% Similarity=0.128 Sum_probs=204.9
Q ss_pred HHHHHHHHhHHHHHHHhccCcC-HHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016434 122 VSPFFFWGTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQ 200 (389)
Q Consensus 122 ~~a~~~~~~~~~~~k~~~~~~~-p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~ 200 (389)
+++.++-+.++.....+.++.+ |...+|..+..-+++..+++.+|++.. ...|..+++++++...+++ +...|+|
T Consensus 25 iLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~---~~~~~hYilla~~DVEaNy-~vV~AyQ 100 (336)
T KOG2766|consen 25 ILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKYI---KAKWRHYILLAFVDVEANY-FVVKAYQ 100 (336)
T ss_pred HHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHHH---HHHHHHhhheeEEeecccE-EEeeehh
Confidence 6777778888887777777777 999999999999999999998887333 2455668899999877665 7789999
Q ss_pred cCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccC---CCCCCccchhhhHHHHHHHHHHHHH
Q 016434 201 RTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA---FDESNSSLWGSGEWWMLLAAQSMAV 277 (389)
Q Consensus 201 ~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~---~~~~~~~~~~~G~~~~l~aa~~~a~ 277 (389)
|++...+.++-......+.+++|+++|.|+++.++.|+++|++||+++...+ .+....+...+||.+.+++|.+||+
T Consensus 101 yTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaV 180 (336)
T KOG2766|consen 101 YTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAV 180 (336)
T ss_pred hcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeee
Confidence 9999999999888888899999999999999999999999999999999877 2223345667899999999999999
Q ss_pred HH------------------HHHHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCh
Q 016434 278 GT------------------HMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSL 339 (389)
Q Consensus 278 ~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a 339 (389)
.+ ..++|+++..+. ++.+.... ...+++.+...++. ..++..+-|.+...-+|.-++
T Consensus 181 SNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~--~tl~w~~~i~~yl~--f~L~MFllYsl~pil~k~~~a 255 (336)
T KOG2766|consen 181 SNVSEEFLVKNADRVELMGFLGLFGAIISAIQ-FIFERHHV--STLHWDSAIFLYLR--FALTMFLLYSLAPILIKTNSA 255 (336)
T ss_pred ccccHHHHHhcCcHHHHHHHHHHHHHHHHHHH-Hhhhccce--eeEeehHHHHHHHH--HHHHHHHHHHhhHHheecCCc
Confidence 98 446666666665 44444332 22334433333333 336666677777888999999
Q ss_pred hHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCC
Q 016434 340 TKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 388 (389)
Q Consensus 340 ~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~~ 388 (389)
+...+-..+.-.|+.++ ..||.+.+|...+..+.+..|.+++.-+++
T Consensus 256 T~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~ 302 (336)
T KOG2766|consen 256 TMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREK 302 (336)
T ss_pred eEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecccc
Confidence 99999999999999998 678999999999999999999999876553
No 22
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.56 E-value=1.1e-14 Score=135.64 Aligned_cols=248 Identities=14% Similarity=0.093 Sum_probs=188.3
Q ss_pred HHHHHhcc--CcC-HHHHHHHHHHHHHHHHHHHHHHhCCCCCC--ChhHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHH
Q 016434 133 VAMKEVLP--KAG-TFFVAAFRLIPAGLLLITFASSQGRKLPS--GFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLG 207 (389)
Q Consensus 133 ~~~k~~~~--~~~-p~~~~~~R~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a 207 (389)
...|..++ +++ |..++.++...+.+.++.....+..+.+. ++..+..++-.|++. +++..+-+.++.+.+++..
T Consensus 34 ~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~n~Sl~~v~VsF~ 112 (316)
T KOG1441|consen 34 ILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHVLGNVSLSYVPVSFY 112 (316)
T ss_pred EeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHHhcchhhhccchhHH
Confidence 56888888 666 99999998888888877776665444332 335666777777775 6677788999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHH--------
Q 016434 208 SVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGT-------- 279 (389)
Q Consensus 208 ~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~-------- 279 (389)
+++..+.|+++.++++++.+|+.+...+..++....||.+....+ .+....|.+.++.+.+..+..+
T Consensus 113 q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e-----~~fn~~G~i~a~~s~~~~al~~I~~~~ll~ 187 (316)
T KOG1441|consen 113 QTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTE-----LSFNLFGFISAMISNLAFALRNILSKKLLT 187 (316)
T ss_pred HHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecc-----ccccHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999998754 2233459999999999998888
Q ss_pred --------------HHHHHHHHHH-HHHHhhcCcccc-cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhHHH
Q 016434 280 --------------HMVIGGLPLM-VISVLNHDPVYG-ESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLS 343 (389)
Q Consensus 280 --------------~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~~s 343 (389)
..-+..+.++ |+....++.... .....++...+. .++.. ++...-....+..+.+.+|.+.+
T Consensus 188 ~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s-v~~f~~Nls~f~~ig~tSalT~~ 265 (316)
T KOG1441|consen 188 SKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLI-LLLNS-VLAFLLNLSAFLVIGRTSALTYS 265 (316)
T ss_pred ccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHH-HHHHH-HHHHHHHHHHHHHHcccCchhhh
Confidence 1123334444 554444443320 001122333222 22222 34444445557789999999999
Q ss_pred hhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCC
Q 016434 344 SLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 388 (389)
Q Consensus 344 ~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~~ 388 (389)
+...+.-++.++.++++|+++.++.+..|.++.++|+++|++.|.
T Consensus 266 V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~ 310 (316)
T KOG1441|consen 266 VAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKL 310 (316)
T ss_pred hhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999997654
No 23
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.55 E-value=6e-14 Score=114.45 Aligned_cols=123 Identities=24% Similarity=0.383 Sum_probs=109.1
Q ss_pred HHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCC--CCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 016434 126 FFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRK--LPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTS 203 (389)
Q Consensus 126 ~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~ 203 (389)
++||...++.|...++.||...+++|+..+.+ ++++....+++ ...+++++...+..+.++...++.++++++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 79 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYIS 79 (126)
T ss_pred ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcc
Confidence 47999999999999999999999999999997 55544444332 4566688888888899877889999999999999
Q ss_pred hhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhh
Q 016434 204 AGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLE 249 (389)
Q Consensus 204 ~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~ 249 (389)
++.++++..++|+++.+++++++||++++.+++|++++++|+.++.
T Consensus 80 ~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 80 ASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999875
No 24
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.44 E-value=4.8e-10 Score=104.14 Aligned_cols=266 Identities=13% Similarity=0.065 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhccC----cCHHHHHHHHHHHHHHHHHHHHHHhCCC----C--------CCChhHHHH
Q 016434 116 LEWAVLVSPFFFWGTAMVAMKEVLPK----AGTFFVAAFRLIPAGLLLITFASSQGRK----L--------PSGFNAWVS 179 (389)
Q Consensus 116 ~g~l~l~~a~~~~~~~~~~~k~~~~~----~~p~~~~~~R~~~~~l~~~~~~~~~~~~----~--------~~~~~~~~~ 179 (389)
...+.++...+.++...+..|+..+. +.|...++.-=++-.++....++...+. . ...+++..+
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 45677788888899999888876553 5577777777777777666666555211 1 123456778
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCC----
Q 016434 180 IFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDE---- 255 (389)
Q Consensus 180 ~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~---- 255 (389)
..+.+++. ++.+-++|.++.+.+++.-++...+-.+.++++..+++++|.++.||.++++.+.|+.++-.+..++
T Consensus 95 ~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~ 173 (345)
T KOG2234|consen 95 VSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAK 173 (345)
T ss_pred HHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcc
Confidence 88888887 6666799999999999999999999999999999999999999999999999999999999444111
Q ss_pred --CCccchhhhHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHhhcCccc--ccccccCCHHH
Q 016434 256 --SNSSLWGSGEWWMLLAAQSMAVGT--------------------HMVIGGLPLMVISVLNHDPVY--GESVKELTSSD 311 (389)
Q Consensus 256 --~~~~~~~~G~~~~l~aa~~~a~~~--------------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 311 (389)
........|....+.+....+... ..++|.+..+......+.... ...+..++...
T Consensus 174 ~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~v 253 (345)
T KOG2234|consen 174 SESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIV 253 (345)
T ss_pred CCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHH
Confidence 112234457777777776665554 334444444444433332221 22344556777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccC
Q 016434 312 ILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 312 ~~~l~~~g~~~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 387 (389)
|..++..++-+-.+ ..-+|+.+-..-+-...+..+++.+.++.++|-+|+....+|..+|+.++.++...+
T Consensus 254 w~vVl~~a~gGLlv-----s~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P 324 (345)
T KOG2234|consen 254 WLVVLLNAVGGLLV-----SLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYP 324 (345)
T ss_pred HHHHHHHhccchhH-----HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCC
Confidence 77666665433333 334577787777888888999999999999999999999999999999999998543
No 25
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.44 E-value=2.1e-12 Score=112.20 Aligned_cols=237 Identities=12% Similarity=0.037 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHH
Q 016434 144 TFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAA 223 (389)
Q Consensus 144 p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~ 223 (389)
...++++++....++.-.+...+++ ...++..-+.+...++-. -+.+...+.|++++|--...+-...-|+=+++++.
T Consensus 53 alaLVf~qC~~N~vfAkvl~~ir~~-~~~D~t~~~~YaAcs~sY-LlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGV 130 (337)
T KOG1580|consen 53 ALALVFFQCTANTVFAKVLFLIRKK-TEIDNTPTKMYAACSASY-LLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGV 130 (337)
T ss_pred HHHHHHHHHHHHHHHHHhheeeccc-ccccCCcchHHHHHHHHH-HHHHHhccchhcccCCcHHHhcccCCCcceeeeeh
Confidence 4556666666666655333333221 222222222333333322 44455668899999999999999999999999999
Q ss_pred HHcCCCCcHHHHHHHHHHHHHhHHhhccC--CCCCCccchhhhHHHHHHHHHHHHHHH--------------------HH
Q 016434 224 LLFGESIGLVGAGGLVLGVIGLLLLEAPA--FDESNSSLWGSGEWWMLLAAQSMAVGT--------------------HM 281 (389)
Q Consensus 224 l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~--~~~~~~~~~~~G~~~~l~aa~~~a~~~--------------------~~ 281 (389)
++.+++++|++...++++++||++....+ ..+......+.|.++.+++-..-+... ..
T Consensus 131 l~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~N 210 (337)
T KOG1580|consen 131 LFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTN 210 (337)
T ss_pred hhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHH
Confidence 99999999999999999999999999986 233334456789999998877655544 33
Q ss_pred HHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHh
Q 016434 282 VIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYL 361 (389)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ 361 (389)
+++.+.+....++.++-.-...+..-.+..|+-+..++ +++++++++.++-....+|-..+++..+.-.|+++.++++|
T Consensus 211 lwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~a-i~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf 289 (337)
T KOG1580|consen 211 LWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLA-IASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLF 289 (337)
T ss_pred HHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHH-HHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHh
Confidence 45555554444444332211122334566676677777 78999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHh
Q 016434 362 GETFSPLQLVGAAVTVVAIYLV 383 (389)
Q Consensus 362 ge~~~~~~~~G~~lIi~g~~l~ 383 (389)
+.+++..||+|.+++..+...=
T Consensus 290 ~npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 290 NNPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred cCcCcHHHHHHHHHHHHHhhhH
Confidence 9999999999999999987653
No 26
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.40 E-value=1.8e-11 Score=113.21 Aligned_cols=131 Identities=19% Similarity=0.262 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhccCcCH--HHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHH
Q 016434 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGT--FFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ 192 (389)
Q Consensus 115 ~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p--~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 192 (389)
..|.++.++++++|+...+..|...++.++ .....+++.++.+++.++....+++...+.+++...+..+.++...++
T Consensus 127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (260)
T TIGR00950 127 PAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALAY 206 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999998877774 455557899999998888776655444556777778888988888899
Q ss_pred HHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHh
Q 016434 193 GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGL 245 (389)
Q Consensus 193 ~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv 245 (389)
.++++++++.+++.++.+.++.|+++++++++++||+++..+++|+++.+.|+
T Consensus 207 ~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 207 FLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999986
No 27
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.39 E-value=6.7e-11 Score=107.83 Aligned_cols=199 Identities=16% Similarity=0.071 Sum_probs=149.4
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhcc
Q 016434 172 SGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP 251 (389)
Q Consensus 172 ~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~ 251 (389)
..+++.+++.+.+++. .+.+.+.++++++++++.-+++..+..+++++++++++|+|++++||.++++.++|+.++..+
T Consensus 12 ~~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~ 90 (244)
T PF04142_consen 12 KSPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLS 90 (244)
T ss_pred HhHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecC
Confidence 4568888999999998 666679999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCC----CC--------ccchhhhHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHhhcCcc
Q 016434 252 AFDE----SN--------SSLWGSGEWWMLLAAQSMAVGT--------------------HMVIGGLPLMVISVLNHDPV 299 (389)
Q Consensus 252 ~~~~----~~--------~~~~~~G~~~~l~aa~~~a~~~--------------------~~~~~~~~~~~~~~~~~~~~ 299 (389)
+... ++ ......|.++.++++++.+... ..+++.++.++...+.+...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~ 170 (244)
T PF04142_consen 91 SSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSA 170 (244)
T ss_pred CccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 6322 10 1234579988998888777766 33444444444433332221
Q ss_pred cc--cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 016434 300 YG--ESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVT 376 (389)
Q Consensus 300 ~~--~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lI 376 (389)
.. ..+...+...|..++..+ ++=.+....+|+.+...=+.....+.+++.+.++++||.+++....+|+++|
T Consensus 171 ~~~~g~f~G~~~~~~~~i~~~a-----~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 171 ISESGFFHGYSWWVWIVIFLQA-----IGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred cccCCchhhcchHHHHHHHHHH-----HhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 11 112233444454433333 2333345567999999999999999999999999999999999999998764
No 28
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.35 E-value=5.8e-12 Score=99.33 Aligned_cols=118 Identities=19% Similarity=0.339 Sum_probs=94.6
Q ss_pred hHHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHH
Q 016434 264 GEWWMLLAAQSMAVGT------------------HMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI 325 (389)
Q Consensus 264 G~~~~l~aa~~~a~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l 325 (389)
...+++++|+++++.. ..+...+.+..+....+... .....+++.|..++.-| +.+++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~---~~~~~~~k~~lflilSG-la~gl 79 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQ---AGGEIGPKSWLFLILSG-LAGGL 79 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCcee---cccccCcceehhhhHHH-HHHHH
Confidence 5678888888888777 22333333444444443332 12235788899888888 78899
Q ss_pred HHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Q 016434 326 SYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 385 (389)
Q Consensus 326 ~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~ 385 (389)
+..+|++|++..+++++.++.-+.|+++.+++++++||+++..+++|+++|++|.+++.+
T Consensus 80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 999999999999999999999999999999999999999999999999999999988765
No 29
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.31 E-value=2.3e-11 Score=97.74 Aligned_cols=105 Identities=22% Similarity=0.291 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCC----CChhHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHH
Q 016434 149 AFRLIPAGLLLITFASSQGRKLP----SGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAAL 224 (389)
Q Consensus 149 ~~R~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l 224 (389)
.+|++.+.+++..+...+++... .+.+.+.+.+..|.++...++.++++|+++.+ +.++.+.+++|+++++++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 57999999988888777554211 12355566677788876688999999999999 58999999999999999999
Q ss_pred HcCCCCcHHHHHHHHHHHHHhHHhhccCCC
Q 016434 225 LFGESIGLVGAGGLVLGVIGLLLLEAPAFD 254 (389)
Q Consensus 225 ~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~ 254 (389)
++|||++++++.+++++++|+.++..++.+
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999987743
No 30
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.29 E-value=2.2e-10 Score=107.97 Aligned_cols=137 Identities=14% Similarity=0.104 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 016434 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGF 194 (389)
Q Consensus 115 ~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 194 (389)
..|.++.++++++|+.+.+..|...++.++..... ...++.+++.++..........+...+...+..|+++..+++.+
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l 225 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRAGAEHGPATVAI-GSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYSL 225 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHH-HHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999998887788877654 44666666666665544322334455555678899999999999
Q ss_pred HHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccC
Q 016434 195 LAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA 252 (389)
Q Consensus 195 ~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~ 252 (389)
+++++++.++++++++.+++|++..+++++++||+++..+++|.+++++|+.......
T Consensus 226 ~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 226 EMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999987654
No 31
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.27 E-value=1.5e-09 Score=98.89 Aligned_cols=228 Identities=18% Similarity=0.150 Sum_probs=167.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHH-HhhHHHHHHH
Q 016434 142 AGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAV 220 (389)
Q Consensus 142 ~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i-~~~~Pv~~~l 220 (389)
-+|.+..+.-.+.+.++.+......+.....+.+.+...++.|++. ..++.+++.++++..++.+..+ ..++-+.+.+
T Consensus 10 G~~~~Q~lG~t~Gali~alv~~~~~~p~~~~~~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl 88 (269)
T PF06800_consen 10 GKPANQILGTTIGALIFALVVFLFRQPAFSMSGTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSL 88 (269)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHHHHH
Confidence 4577777776666666666666555544433347777777777776 7788899999999999999999 6788888999
Q ss_pred HHHHHcCCCCcHHHH----HHHHHHHHHhHHhhccCCCCC---CccchhhhHHHHHHHHHHHHHHH--------------
Q 016434 221 LAALLFGESIGLVGA----GGLVLGVIGLLLLEAPAFDES---NSSLWGSGEWWMLLAAQSMAVGT-------------- 279 (389)
Q Consensus 221 la~l~l~Er~~~~~~----~g~~l~~~Gv~ll~~~~~~~~---~~~~~~~G~~~~l~aa~~~a~~~-------------- 279 (389)
.+.++++|.-+..++ +++++.++|+++....+.+++ +.....+|....+++.+.|..|.
T Consensus 89 ~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~~~~~~~~~ 168 (269)
T PF06800_consen 89 IGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAFHVSGWSAF 168 (269)
T ss_pred HHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCChhHhH
Confidence 999999998776654 488999999999998874333 23456779999999999999998
Q ss_pred -----HHHHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHhhhhhHHHHHH
Q 016434 280 -----HMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFAS 354 (389)
Q Consensus 280 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~ 354 (389)
.+++++++..... ... ..+...|. -+..| +.-.++-.++..+.++.+.+..=.+..+.++++.
T Consensus 169 lPqaiGm~i~a~i~~~~~---~~~-------~~~k~~~~-nil~G-~~w~ignl~~~is~~~~G~a~af~lSQ~~vvISt 236 (269)
T PF06800_consen 169 LPQAIGMLIGAFIFNLFS---KKP-------FFEKKSWK-NILTG-LIWGIGNLFYLISAQKNGVATAFTLSQLGVVIST 236 (269)
T ss_pred HHHHHHHHHHHHHHhhcc---ccc-------ccccchHH-hhHHH-HHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHH
Confidence 2333333322221 111 11222332 23345 4455678888899999999999999999999999
Q ss_pred HHHHHHhCCCCCHH----HHHHHHHHHHHHHH
Q 016434 355 IFGFLYLGETFSPL----QLVGAAVTVVAIYL 382 (389)
Q Consensus 355 i~~~~~~ge~~~~~----~~~G~~lIi~g~~l 382 (389)
+.+++++||.=+.. .++|.++|+.|.++
T Consensus 237 lgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 237 LGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred hhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 99999999987755 46788888888764
No 32
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.24 E-value=1.5e-09 Score=98.33 Aligned_cols=240 Identities=14% Similarity=0.104 Sum_probs=176.3
Q ss_pred ccCcC-HHHHHHHHHHHHHHHHHHHHHHhCC-----CCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHh
Q 016434 139 LPKAG-TFFVAAFRLIPAGLLLITFASSQGR-----KLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIID 212 (389)
Q Consensus 139 ~~~~~-p~~~~~~R~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~ 212 (389)
.++++ |..++-+++++-.++........+. +.+..|++..+-+....+..++...+-+++++|++.+.-++...
T Consensus 39 ~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KS 118 (349)
T KOG1443|consen 39 TKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKS 118 (349)
T ss_pred hcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccc
Confidence 34577 9999999988887776554433322 22446666665555555566888888999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHH-------------
Q 016434 213 SQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGT------------- 279 (389)
Q Consensus 213 ~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~------------- 279 (389)
..++|+.+++.+|--||.++.-..-++++.+|+.+....+. +....|..+.+.+.++.++..
T Consensus 119 Ssi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT-----qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~ 193 (349)
T KOG1443|consen 119 SSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST-----QFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSA 193 (349)
T ss_pred cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc-----ceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccc
Confidence 99999999999999999999999999999999999998762 233448888888888777665
Q ss_pred ----------HHHHHHHHHHHHHHhhcCcccc---cccccCCH-HHHHHHHHHHHHHHHHHHHHH---HHHhccCChhHH
Q 016434 280 ----------HMVIGGLPLMVISVLNHDPVYG---ESVKELTS-SDILALLYTSIFGSAISYGVY---FYSATKGSLTKL 342 (389)
Q Consensus 280 ----------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~l~~~g~~~~~l~~~l~---~~al~~~~a~~~ 342 (389)
..-+..+.+++..+.++++... ..+...+. ..+..+..++ ++..+++.+. +.-+.+.+....
T Consensus 194 ~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~-l~g~laF~l~~sEflLl~~Ts~ltl 272 (349)
T KOG1443|consen 194 KRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLIS-LGGLLAFLLEFSEFLLLSRTSSLTL 272 (349)
T ss_pred cCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHH-HHHHHHHHHHHHHHheeeeccceee
Confidence 2223345556666666665431 11122222 2233333333 3444455443 445778888899
Q ss_pred HhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Q 016434 343 SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 384 (389)
Q Consensus 343 s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~ 384 (389)
++.....-+...+++.++.++.++...|+|.++.+.|+.+..
T Consensus 273 SIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 273 SIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred eHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999883
No 33
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.21 E-value=8.3e-10 Score=103.99 Aligned_cols=137 Identities=14% Similarity=0.144 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCC--CCChhHHHHHHHHHHHHHHHHH
Q 016434 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKL--PSGFNAWVSIFLFALVDASCFQ 192 (389)
Q Consensus 115 ~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~ 192 (389)
..|.++.++++++|+......|...+. ++...+.+++.++.+.+.++........ ..+.+.+...+..++++....+
T Consensus 149 ~~G~l~~l~a~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~ 227 (292)
T PRK11272 149 PWGAILILIASASWAFGSVWSSRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAI 227 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999976543 4556677888888888877766544322 2345778888888998888999
Q ss_pred HHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccC
Q 016434 193 GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA 252 (389)
Q Consensus 193 ~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~ 252 (389)
.++++++++.++++++.+.+++|++.++++++++||+++..+++|.++++.|+.++...+
T Consensus 228 ~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 228 SAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999987643
No 34
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.18 E-value=2.7e-08 Score=91.34 Aligned_cols=253 Identities=16% Similarity=0.145 Sum_probs=182.5
Q ss_pred HHhHHHHHHHhccCcC-HHHHHH--HHHHHHHHHHHHHHHHhCCCC-CCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 016434 128 WGTAMVAMKEVLPKAG-TFFVAA--FRLIPAGLLLITFASSQGRKL-PSGFNAWVSIFLFALVDASCFQGFLAQGLQRTS 203 (389)
Q Consensus 128 ~~~~~~~~k~~~~~~~-p~~~~~--~R~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~ 203 (389)
--.+.+..|.+....+ |..+.. .|++...+.+...-..+-.+. +.+++..++++-..++. .++...-..+++|.+
T Consensus 24 S~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf-~~~i~t~~~slk~ln 102 (314)
T KOG1444|consen 24 SILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLF-VGMLFTGSKSLKYLN 102 (314)
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHH-HHHHHHccccccccC
Confidence 3345577888887766 665555 888877776655443333232 34566666666666665 445556678999999
Q ss_pred hhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHH----
Q 016434 204 AGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGT---- 279 (389)
Q Consensus 204 ~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~---- 279 (389)
+..-+++...+|+++++....++|.|++...|.++....+|......++..- ...|+.+++...+.-+.+.
T Consensus 103 Vpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf-----~~~gY~w~~~n~~~~a~~~v~~k 177 (314)
T KOG1444|consen 103 VPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSF-----NLRGYSWALANCLTTAAFVVYVK 177 (314)
T ss_pred chHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccccee-----cchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998888776222 2238888888888777766
Q ss_pred ----------------HHHHHHHHHHHHHHhhcCcc-ccccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhH
Q 016434 280 ----------------HMVIGGLPLMVISVLNHDPV-YGESV-KELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTK 341 (389)
Q Consensus 280 ----------------~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~ 341 (389)
-.++...++.....+.++.. ..... ...+...+..+..-|+.+.++.|.. ..+.+..++..
T Consensus 178 k~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s-~~ct~~~SAtT 256 (314)
T KOG1444|consen 178 KSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTS-FLCTRVNSATT 256 (314)
T ss_pred HhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhhccccc
Confidence 23334444444444444422 11111 1234566777777777777776665 56777778888
Q ss_pred HHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccC
Q 016434 342 LSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 342 ~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 387 (389)
.+++.........+.+.+++|++.++...+|..+-+.|.++|+..+
T Consensus 257 ~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~ 302 (314)
T KOG1444|consen 257 TTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYAT 302 (314)
T ss_pred eeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhh
Confidence 8888877777788888888899999999999999999999988643
No 35
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.15 E-value=1.9e-09 Score=101.75 Aligned_cols=134 Identities=16% Similarity=0.111 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCC-CCCCChhHHHHHHHHHHHHHHHHHH
Q 016434 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGR-KLPSGFNAWVSIFLFALVDASCFQG 193 (389)
Q Consensus 115 ~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~ 193 (389)
..|.+++++++++|+.+.+..|...++.++..... ....+.+.+.....+. ....+...+..++..++ ...+.+.
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~-~t~~~~~ 230 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFLSPQPAMVFSLPAIIKLLLAAA-AMGFGYA 230 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHH-HHHHHHH
Confidence 45889999999999999999998877777765432 2233333332222322 22344456666666664 5678889
Q ss_pred HHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccC
Q 016434 194 FLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA 252 (389)
Q Consensus 194 ~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~ 252 (389)
++++++++.+++.++.+.+++|++.++++++++||+++..+++|.++++.|+.+....+
T Consensus 231 l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~ 289 (295)
T PRK11689 231 AWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT 289 (295)
T ss_pred HHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence 99999999999999999999999999999999999999999999999999998887644
No 36
>PRK13499 rhamnose-proton symporter; Provisional
Probab=99.13 E-value=1.5e-07 Score=89.27 Aligned_cols=271 Identities=13% Similarity=0.057 Sum_probs=175.0
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHH-HHHHHHHHHH---HHHHHhC--CC-CCCChhHHHHHHHHHH
Q 016434 113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAF-RLIPAGLLLI---TFASSQG--RK-LPSGFNAWVSIFLFAL 185 (389)
Q Consensus 113 ~~~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~-R~~~~~l~~~---~~~~~~~--~~-~~~~~~~~~~~~~~g~ 185 (389)
+...|++..+++.++||+.++-.|. .+..+ +|.... -.+++.++.. .....+. .. ...+.+.+...++.|+
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~-wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~ 81 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWS-WETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGA 81 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCCCc-hhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHH
Confidence 3467899999999999999999997 44333 222211 1112222111 1111100 00 1234566777777777
Q ss_pred HHHHHHHHHHHHHhhcCChhHHHHH-HhhHHHHHHHHHHHHcCCCC-------cHHHHHHHHHHHHHhHHhhc----cCC
Q 016434 186 VDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESI-------GLVGAGGLVLGVIGLLLLEA----PAF 253 (389)
Q Consensus 186 ~~~~~~~~~~~~al~~~~~~~a~~i-~~~~Pv~~~lla~l~l~Er~-------~~~~~~g~~l~~~Gv~ll~~----~~~ 253 (389)
+. ..++..++.++++..++.+..| ..++-++..++..++++|-. .....+|++++++|+++... .+.
T Consensus 82 ~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~ 160 (345)
T PRK13499 82 LW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKER 160 (345)
T ss_pred HH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhccc
Confidence 76 7777899999999999999998 88899999999999998744 34578899999999999998 542
Q ss_pred CC----CCccchhhhHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHH-HHhh--cC
Q 016434 254 DE----SNSSLWGSGEWWMLLAAQSMAVGT-----------------------------HMVIGGLPLMVI-SVLN--HD 297 (389)
Q Consensus 254 ~~----~~~~~~~~G~~~~l~aa~~~a~~~-----------------------------~~~~~~~~~~~~-~~~~--~~ 297 (389)
+. +......+|...++++++.++.|. .++++++..-.. .... ..
T Consensus 161 ~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~ 240 (345)
T PRK13499 161 KMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKN 240 (345)
T ss_pred ccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 21 223457789999999999999888 223444433321 1111 11
Q ss_pred cccc-cccccCC----HHHHHHHHHHHHHHHHHHHHHHHHHhccCChhHHH----hhhhhHHHHHHHHHHHHhCCCCC--
Q 016434 298 PVYG-ESVKELT----SSDILALLYTSIFGSAISYGVYFYSATKGSLTKLS----SLTFLTPMFASIFGFLYLGETFS-- 366 (389)
Q Consensus 298 ~~~~-~~~~~~~----~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~~s----~~~~~~pv~a~i~~~~~~ge~~~-- 366 (389)
.... ......+ ......-+..| +.=.+++++|..+-++.+.+... +.+.+..+++.++++ ++||.=+
T Consensus 241 ~~~~~~~~~~~~~~~~~~n~l~~~l~G-~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~ 318 (345)
T PRK13499 241 KDLSLKADFSLAKPLLITNVLLSALAG-VMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGAS 318 (345)
T ss_pred CCcccchhccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCC
Confidence 1110 0011111 11212113233 44556777777777776444333 444888899999998 5999766
Q ss_pred ----HHHHHHHHHHHHHHHHhhccCC
Q 016434 367 ----PLQLVGAAVTVVAIYLVNFRGS 388 (389)
Q Consensus 367 ----~~~~~G~~lIi~g~~l~~~~~~ 388 (389)
...++|.++++.|.+++...+.
T Consensus 319 ~k~~~~l~~G~vliI~g~~lig~~~~ 344 (345)
T PRK13499 319 RRPVRVLSLGCVVIILAANIVGLGNA 344 (345)
T ss_pred ccchhHHHHHHHHHHHHHHHHhhccc
Confidence 6779999999999999887653
No 37
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.12 E-value=7.5e-09 Score=93.84 Aligned_cols=240 Identities=12% Similarity=0.085 Sum_probs=180.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHH
Q 016434 143 GTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLA 222 (389)
Q Consensus 143 ~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla 222 (389)
++..+.+.+-+++.++-..++..++++ ....+.++.+...++.+.. ...|.|.|++|++--.-.+-...--+-+++++
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~-~~~~apl~~y~~is~tn~~-s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg 127 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKWWKKE-LSGVAPLYKYSLISFTNTL-SSWCGYEALKYVSYPTQTLAKSCKMIPVMLMG 127 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhccccc-CCCCCchhHHhHHHHHhhc-chHHHHHHHHhccchHHHHHHHhhhhHHHHHH
Confidence 588999999999988886666555444 3334667777788888744 44699999999999888888888888899999
Q ss_pred HHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCC----CCccchhhhHHHHHHHHHHHHHHH-------------------
Q 016434 223 ALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDE----SNSSLWGSGEWWMLLAAQSMAVGT------------------- 279 (389)
Q Consensus 223 ~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~----~~~~~~~~G~~~~l~aa~~~a~~~------------------- 279 (389)
.++.+.|++..+.+...++-.||.+....+.++ .....-..|..+....-+.=+..+
T Consensus 128 ~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~ 207 (327)
T KOG1581|consen 128 TLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMF 207 (327)
T ss_pred HHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHH
Confidence 999999999999999999999999888764222 111122347777666666555444
Q ss_pred -HHHHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHhhhhhHHHHHHHHHH
Q 016434 280 -HMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGF 358 (389)
Q Consensus 280 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~ 358 (389)
..+++.+......+..+.....-.+...+++.+.-++... +++++++.+.+.-+++.++.+...++.+.-.++++++.
T Consensus 208 ~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s-~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~ 286 (327)
T KOG1581|consen 208 GVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYS-TCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSC 286 (327)
T ss_pred HHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHH-HhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHH
Confidence 2234444444432222222211133445677777777777 67788999999999999999999999999999999999
Q ss_pred HHhCCCCCHHHHHHHHHHHHHHHHhhc
Q 016434 359 LYLGETFSPLQLVGAAVTVVAIYLVNF 385 (389)
Q Consensus 359 ~~~ge~~~~~~~~G~~lIi~g~~l~~~ 385 (389)
+.+|.+++..||+|..++..|+.+-.+
T Consensus 287 i~f~h~~s~~q~~g~~iVFg~i~l~~~ 313 (327)
T KOG1581|consen 287 IVFGHPLSSEQWLGVLIVFGGIFLEIL 313 (327)
T ss_pred HHhCCccchhhccCeeeehHHHHHHHH
Confidence 999999999999999999999887553
No 38
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.11 E-value=2.9e-09 Score=102.58 Aligned_cols=137 Identities=13% Similarity=0.142 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhccCcCH-HHHHHHHHHHHHHHHHHHHHHhCC-CCC---CCh-hHHHHHHHHHHHHH
Q 016434 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGT-FFVAAFRLIPAGLLLITFASSQGR-KLP---SGF-NAWVSIFLFALVDA 188 (389)
Q Consensus 115 ~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p-~~~~~~R~~~~~l~~~~~~~~~~~-~~~---~~~-~~~~~~~~~g~~~~ 188 (389)
..|.+++++++++|+++.+..|...++.++ ...+++.+.++.+.+.++...... +.. ..+ ......+..+++ .
T Consensus 188 ~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~-t 266 (358)
T PLN00411 188 LIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAII-T 266 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHH-H
Confidence 458899999999999999999877777654 466667777666665544443322 111 111 112233334444 4
Q ss_pred HHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccC
Q 016434 189 SCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA 252 (389)
Q Consensus 189 ~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~ 252 (389)
.+++.++++++++.+++.+++..++.|++++++++++++|++++.+++|.++++.|++++.++.
T Consensus 267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~ 330 (358)
T PLN00411 267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK 330 (358)
T ss_pred HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence 6788899999999999999999999999999999999999999999999999999999998754
No 39
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.08 E-value=8.7e-09 Score=97.39 Aligned_cols=138 Identities=15% Similarity=0.146 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhccCcC---HHHHHHHHHHHHHHHHHHHHHHhCCC-------CCCChhHHHHHHHHH
Q 016434 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAG---TFFVAAFRLIPAGLLLITFASSQGRK-------LPSGFNAWVSIFLFA 184 (389)
Q Consensus 115 ~~g~l~l~~a~~~~~~~~~~~k~~~~~~~---p~~~~~~R~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~g 184 (389)
..|.++.++++++|+...+..|...++.+ .....++...++.+.+.......+.+ ...+...+...+..+
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA 221 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence 46899999999999999999998655433 23444445555444333332222211 134557788888999
Q ss_pred HHHHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccC
Q 016434 185 LVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA 252 (389)
Q Consensus 185 ~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~ 252 (389)
+++..+.+.++++++++.++.+++.+..++|++..+++++++||+++..+++|.+++++|+.+...+.
T Consensus 222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence 99999999999999999999999999999999999999999999999999999999999999887654
No 40
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=99.03 E-value=2.6e-08 Score=93.56 Aligned_cols=257 Identities=15% Similarity=0.104 Sum_probs=152.2
Q ss_pred chhhHHHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHH
Q 016434 111 ELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASC 190 (389)
Q Consensus 111 ~~~~~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 190 (389)
+.+...|+++.+.+.++-+....+.|....+.+.. -.| .+.....-.++ ...+.|+.....
T Consensus 2 ~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~---~~~--------------~~~~~~~~l~~--~~W~~G~~~~~~ 62 (300)
T PF05653_consen 2 NTDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRG---SLR--------------AGSGGRSYLRR--PLWWIGLLLMVL 62 (300)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---ccc--------------ccchhhHHHhh--HHHHHHHHHHhc
Confidence 34556788999999999999998888654422210 000 00000000111 222333444455
Q ss_pred HHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCcc-chh-------
Q 016434 191 FQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSS-LWG------- 262 (389)
Q Consensus 191 ~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~-~~~------- 262 (389)
+..+.+.|+.+.|.+..+.+..+.-++.++++..++|||+++.++.|+.+++.|..++..-+..+++.. ...
T Consensus 63 g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~ 142 (300)
T PF05653_consen 63 GEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQ 142 (300)
T ss_pred chHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcC
Confidence 667888999999999999999999999999999999999999999999999999987765432221111 000
Q ss_pred h---hHHHHHHHHHHHHHHH----------------HHHHHHHHHHH---HHHhhcCcccccccccCCHHHHHHHHHHHH
Q 016434 263 S---GEWWMLLAAQSMAVGT----------------HMVIGGLPLMV---ISVLNHDPVYGESVKELTSSDILALLYTSI 320 (389)
Q Consensus 263 ~---G~~~~l~aa~~~a~~~----------------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 320 (389)
. .+..........-.+. ..++|+..... +........ .....-.++..|..++.. +
T Consensus 143 ~~fl~y~~~~~~~~~~L~~~~~~r~g~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~-~g~~~f~~~~~y~l~~~~-v 220 (300)
T PF05653_consen 143 PGFLVYFILVLVLILILIFFIKPRYGRRNILVYISICSLIGSFTVLSAKAISILIKLTF-SGDNQFTYPLTYLLLLVL-V 220 (300)
T ss_pred cceehhHHHHHHHHHHHHHhhcchhcccceEEEEEEeccccchhhhHHHHHHHHHHHHh-cCchhhhhhHHHHHHHHH-H
Confidence 0 1111111111111111 11111111100 000000000 000011234455444333 3
Q ss_pred HHHHHHHHHHHHHhccCChhHHHhhh-hhHHHHHHHHHHHHhCCC--CCH----HHHHHHHHHHHHHHHhhccCC
Q 016434 321 FGSAISYGVYFYSATKGSLTKLSSLT-FLTPMFASIFGFLYLGET--FSP----LQLVGAAVTVVAIYLVNFRGS 388 (389)
Q Consensus 321 ~~~~l~~~l~~~al~~~~a~~~s~~~-~~~pv~a~i~~~~~~ge~--~~~----~~~~G~~lIi~g~~l~~~~~~ 388 (389)
.+........++|+++.+++.+.++. ..-...+++-+.++++|. .++ ....|..+++.|+++....|+
T Consensus 221 ~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~ 295 (300)
T PF05653_consen 221 VTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKD 295 (300)
T ss_pred HHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCc
Confidence 55566677779999999999888875 455667778888899985 444 446788999999999887664
No 41
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.02 E-value=9.7e-09 Score=91.87 Aligned_cols=251 Identities=17% Similarity=0.126 Sum_probs=171.1
Q ss_pred HhHHHHHHHhcc-------Cc-CHHHHHHHHHHHHHHHHHHHHHHhCCCCC-------------C-ChhHHHHHHHHHHH
Q 016434 129 GTAMVAMKEVLP-------KA-GTFFVAAFRLIPAGLLLITFASSQGRKLP-------------S-GFNAWVSIFLFALV 186 (389)
Q Consensus 129 ~~~~~~~k~~~~-------~~-~p~~~~~~R~~~~~l~~~~~~~~~~~~~~-------------~-~~~~~~~~~~~g~~ 186 (389)
+.+.+..|++-. .+ +|+..+..-++.-.++++.+.+.+.+... . ++-+....+...++
T Consensus 16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~ 95 (372)
T KOG3912|consen 16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALC 95 (372)
T ss_pred cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHH
Confidence 345566776542 12 38888888888887888777666543210 0 01111222335555
Q ss_pred HHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCC-----CCCCccch
Q 016434 187 DASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAF-----DESNSSLW 261 (389)
Q Consensus 187 ~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~-----~~~~~~~~ 261 (389)
. ..+..+.|.++.+++++.-+++.....+|+.+++..+++.+++.++|+|+....+|++++...+. .-++.+..
T Consensus 96 D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~i 174 (372)
T KOG3912|consen 96 D-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSI 174 (372)
T ss_pred H-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccc
Confidence 5 55556889999999999999999999999999999999999999999999999999999987751 12233456
Q ss_pred hhhHHHHHHHHHHHHHHH--------------------HHHHHHHH----HHHHHHhhcCcccccccccCCHHHH-----
Q 016434 262 GSGEWWMLLAAQSMAVGT--------------------HMVIGGLP----LMVISVLNHDPVYGESVKELTSSDI----- 312 (389)
Q Consensus 262 ~~G~~~~l~aa~~~a~~~--------------------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~----- 312 (389)
..|+++.+.+-+..|+.+ ..++|.++ ..+...+.....+... ......+|
T Consensus 175 itGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~-~~g~~eD~~~~~~ 253 (372)
T KOG3912|consen 175 ITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCN-PRGVLEDWGDAFA 253 (372)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCC-CCcchhhHHHHHH
Confidence 779999999999999888 33444322 2333222222121110 00001111
Q ss_pred -------HHHHHHHHHHHHHHHHHHHH----HhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Q 016434 313 -------LALLYTSIFGSAISYGVYFY----SATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIY 381 (389)
Q Consensus 313 -------~~l~~~g~~~~~l~~~l~~~----al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~ 381 (389)
.++...| ..++..+++. .-|..++++-.++..+...+--+++.....|.++..|+.|.++.+.|++
T Consensus 254 ~~~e~p~l~val~~---~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~ 330 (372)
T KOG3912|consen 254 ALQESPSLAVALIG---FTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGII 330 (372)
T ss_pred HhcCCchhHHHHhh---hhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222233 2333333322 3466789999999999999999999999999999999999999999999
Q ss_pred Hhh
Q 016434 382 LVN 384 (389)
Q Consensus 382 l~~ 384 (389)
+|+
T Consensus 331 lY~ 333 (372)
T KOG3912|consen 331 LYN 333 (372)
T ss_pred HHH
Confidence 986
No 42
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.00 E-value=3.2e-09 Score=99.42 Aligned_cols=134 Identities=10% Similarity=0.031 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhccCcCHH----HHHHHHHHHHHHHHHHHHHHhCC-CCCCChhHHHHHHHHHHHHHH
Q 016434 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTF----FVAAFRLIPAGLLLITFASSQGR-KLPSGFNAWVSIFLFALVDAS 189 (389)
Q Consensus 115 ~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~----~~~~~R~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~ 189 (389)
..+.++.++++++|+.+.+..|...++.++. ....+.+....+.+..+...++. ........++..+..+.+...
T Consensus 143 ~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 222 (281)
T TIGR03340 143 RKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIG 222 (281)
T ss_pred hhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHH
Confidence 3466778999999999999988765444432 23333333332222222222222 121222344555667777778
Q ss_pred HHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHh
Q 016434 190 CFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLL 248 (389)
Q Consensus 190 ~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll 248 (389)
+++.++++++++.+++.++.+.+++|++..+++++++||+++..+++|.+++++|+.++
T Consensus 223 l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l~ 281 (281)
T TIGR03340 223 GAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVVL 281 (281)
T ss_pred HHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHhC
Confidence 88999999999999999999999999999999999999999999999999999999864
No 43
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.97 E-value=4.9e-09 Score=85.17 Aligned_cols=80 Identities=35% Similarity=0.670 Sum_probs=74.4
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Q 016434 305 KELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 384 (389)
Q Consensus 305 ~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~ 384 (389)
...+.+.+...++.+++++.+++.++++++++.+++.++.+.+++|+++.+++++++||+++..+++|.++++.|++++.
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 46 KNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred cCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 45677788888888988889999999999999999999999999999999999999999999999999999999999875
No 44
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.90 E-value=3e-08 Score=93.81 Aligned_cols=138 Identities=17% Similarity=0.054 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhcc--CcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--h---------hHHHH-H
Q 016434 115 LLEWAVLVSPFFFWGTAMVAMKEVLP--KAGTFFVAAFRLIPAGLLLITFASSQGRKLPSG--F---------NAWVS-I 180 (389)
Q Consensus 115 ~~g~l~l~~a~~~~~~~~~~~k~~~~--~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~--~---------~~~~~-~ 180 (389)
..|.++.++++++|+...+..|...+ +.++..++.+.+..+.+.+.|+....+...... . ..... .
T Consensus 144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (302)
T TIGR00817 144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS 223 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence 56899999999999999999998887 789999999999999999988876543211000 0 01111 2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccC
Q 016434 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA 252 (389)
Q Consensus 181 ~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~ 252 (389)
+..+.......+.+++++++++++..++++..+.|+++++++++++||+++..+++|.++++.|+.+.....
T Consensus 224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k 295 (302)
T TIGR00817 224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK 295 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 222222223333566789999999999999999999999999999999999999999999999999987643
No 45
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.87 E-value=1.2e-08 Score=86.73 Aligned_cols=193 Identities=13% Similarity=0.053 Sum_probs=139.6
Q ss_pred HHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHHH
Q 016434 189 SCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWM 268 (389)
Q Consensus 189 ~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~~ 268 (389)
.+.+..|..|+++.++++++.+......|+.+++++.+|+|+...++++.++++.|++++.+.+.+ ..+...|..++
T Consensus 64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~---~a~e~iGi~~A 140 (290)
T KOG4314|consen 64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE---HADEIIGIACA 140 (290)
T ss_pred ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch---hhhhhhhHHHH
Confidence 344568999999999999999999999999999999999999999999999999999999976521 22335699999
Q ss_pred HHHHHHHHHHH---------------HHHHHHH-------HHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHH
Q 016434 269 LLAAQSMAVGT---------------HMVIGGL-------PLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAIS 326 (389)
Q Consensus 269 l~aa~~~a~~~---------------~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~ 326 (389)
..++...++|- ..+.+.+ ...+...+..... +++.......|..+...+.+..+ .
T Consensus 141 V~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~V--E~~qsFA~~PWG~l~G~A~L~lA-F 217 (290)
T KOG4314|consen 141 VGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGV--EHLQSFAAAPWGCLCGAAGLSLA-F 217 (290)
T ss_pred HHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhch--HHHHHHhhCCchhhhhHHHHHHH-H
Confidence 99999998887 1111111 1111111111100 11111222334444444433333 3
Q ss_pred HHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccC
Q 016434 327 YGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 327 ~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 387 (389)
.++.+.+.....|...++.+..........+.++-+-..+...++|..+|+.|.+++...+
T Consensus 218 N~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 218 NFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred hhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 3445778888899999999999999999999887777788999999999999999887654
No 46
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.84 E-value=1.4e-07 Score=89.02 Aligned_cols=132 Identities=14% Similarity=0.113 Sum_probs=91.9
Q ss_pred HHHHHHHHHHhHHHHHHHhccCc--CHHHHHHHHHHHHHHHHHHHHHHhCCCCCC-ChhHHHHHHHHHHHHHHHHHHHHH
Q 016434 120 VLVSPFFFWGTAMVAMKEVLPKA--GTFFVAAFRLIPAGLLLITFASSQGRKLPS-GFNAWVSIFLFALVDASCFQGFLA 196 (389)
Q Consensus 120 ~l~~a~~~~~~~~~~~k~~~~~~--~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~ 196 (389)
..++++++|+.+.+..|...++. +....+.+...++.+...++.......... +...+...+..++ .....+.+++
T Consensus 153 ~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~t~i~~~~~~ 231 (296)
T PRK15430 153 IALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGI-VTTVPLLCFT 231 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHccCCcccccCCcHHHHHHHHHHHH-HHHHHHHHHH
Confidence 46778899999999998765432 233334444444433322221110000111 1122233334454 4568889999
Q ss_pred HHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccC
Q 016434 197 QGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA 252 (389)
Q Consensus 197 ~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~ 252 (389)
+++++.+++.++++.+++|++..++++++++|+++..+++|+++++.|+.++..++
T Consensus 232 ~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~ 287 (296)
T PRK15430 232 AAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA 287 (296)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998887644
No 47
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.81 E-value=3.5e-07 Score=85.42 Aligned_cols=135 Identities=24% Similarity=0.312 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHH-HHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 016434 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAA-FRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQG 193 (389)
Q Consensus 115 ~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~-~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 193 (389)
..|.++.+++++.|+...+..|... ..++..... +.+........+....... .+...+.+......|+++...++.
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~i~~~ 230 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFLSGFG-APILSRAWLLLLYLGVFSTGLAYL 230 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHhcccc-ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999766 666666666 4444223333333322222 345567888888899998777889
Q ss_pred HHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhcc
Q 016434 194 FLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP 251 (389)
Q Consensus 194 ~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~ 251 (389)
++++++++.++..++.+..+.|++..++++++++|+++..+++|+.+.+.|+.+....
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 231 LWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999998764
No 48
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.81 E-value=2.3e-07 Score=74.02 Aligned_cols=70 Identities=17% Similarity=0.156 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhc
Q 016434 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA 250 (389)
Q Consensus 181 ~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~ 250 (389)
...++++...++.++.+++++.|.+.+..+.++.++++.+++++++|||+++.+++|+.++++|++++..
T Consensus 40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3344456677888999999999999999998899999999999999999999999999999999998864
No 49
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.80 E-value=1.7e-07 Score=83.01 Aligned_cols=137 Identities=12% Similarity=0.039 Sum_probs=122.1
Q ss_pred hhhHHHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHH
Q 016434 112 LGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCF 191 (389)
Q Consensus 112 ~~~~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 191 (389)
.-+..|..+.+.+..+|..+.+..|..-+..+.-.-+..-+.+++++.+|+-..+..+.-..+.-....+..+++...+-
T Consensus 144 ~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalP 223 (292)
T COG5006 144 SLDPVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALP 223 (292)
T ss_pred cCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccc
Confidence 44567899999999999999999998887777777788889999999999988776666666677788888999999999
Q ss_pred HHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHh
Q 016434 192 QGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLL 248 (389)
Q Consensus 192 ~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll 248 (389)
|.+-..++++.|...-.++.+++|.+.++.++++++|+++..||+++...+.+..-.
T Consensus 224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~ 280 (292)
T COG5006 224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGS 280 (292)
T ss_pred hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999988876633
No 50
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.66 E-value=4.1e-07 Score=85.54 Aligned_cols=129 Identities=14% Similarity=0.007 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHH----HHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHH
Q 016434 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLI----PAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASC 190 (389)
Q Consensus 115 ~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 190 (389)
.+|+++.+++.+.++.+....|.. +.+|...++.+.. .+.++..++ ++. .+...+..+..++.|++ ...
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~Gi~-~~i 223 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGH---ILA-KPLKKYAILLNILPGLM-WGI 223 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHH---hcc-cchHHHHHHHHHHHHHH-HHH
Confidence 459999999999999999999965 4788888666555 444444444 111 22233455556668888 588
Q ss_pred HHHHHHHHhh-cCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHH----HHHHHHHHHhHHhhc
Q 016434 191 FQGFLAQGLQ-RTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGA----GGLVLGVIGLLLLEA 250 (389)
Q Consensus 191 ~~~~~~~al~-~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~----~g~~l~~~Gv~ll~~ 250 (389)
++.+|+.+.+ +.+++.+.++....|+...+++.+++||+.+++++ +|.++.+.|+.++..
T Consensus 224 a~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 224 GNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 8889999999 99999999999999999999999999999999999 999999999988754
No 51
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.66 E-value=2.1e-08 Score=89.51 Aligned_cols=251 Identities=14% Similarity=0.099 Sum_probs=170.5
Q ss_pred HHHHHhccC----cC-HHHHHHHHHHHHHHHHHHHHHHhCCC--------CCCChhHHHHHHHHHHHHHHHHHHHHHHHh
Q 016434 133 VAMKEVLPK----AG-TFFVAAFRLIPAGLLLITFASSQGRK--------LPSGFNAWVSIFLFALVDASCFQGFLAQGL 199 (389)
Q Consensus 133 ~~~k~~~~~----~~-p~~~~~~R~~~~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~~al 199 (389)
+..|++++. +| |..+++.++++...+...+-....+- .+.+.+..+..+-+.++. .++..+-++.+
T Consensus 45 f~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL 123 (347)
T KOG1442|consen 45 FLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCL 123 (347)
T ss_pred hhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceeh
Confidence 345666554 55 99999999999988776664433221 122222223333233332 33344557899
Q ss_pred hcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHH
Q 016434 200 QRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGT 279 (389)
Q Consensus 200 ~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~ 279 (389)
+|++++.-.+=..++.+|++++.++++|+|-+..-..+.++++.|-.+=...+...+.. -..|.++++++.++-|+..
T Consensus 124 ~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~l--s~~GvifGVlaSl~vAlna 201 (347)
T KOG1442|consen 124 KYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTL--SWIGVIFGVLASLAVALNA 201 (347)
T ss_pred hhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCcc--chhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999888888877755444222333 3459999999999887766
Q ss_pred --------------------HHHHHHHHHHHHHHhhcCccccccccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 016434 280 --------------------HMVIGGLPLMVISVLNHDPVYGESVKE-LTSSDILALLYTSIFGSAISYGVYFYSATKGS 338 (389)
Q Consensus 280 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~ 338 (389)
..+.+.++++|...+.++-..-..+.+ ++...|..+..-|+++..++|.- ..-+|-.+
T Consensus 202 iytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvT-g~QIK~TS 280 (347)
T KOG1442|consen 202 IYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVT-GWQIKVTS 280 (347)
T ss_pred HhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhhee-eEEEEecc
Confidence 334555566665555444221111112 24455655555555544444322 22356778
Q ss_pred hhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccC
Q 016434 339 LTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 339 a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 387 (389)
|.+..+-....-..--++++.+++|.-+..-|-|-++|+.|...|++.|
T Consensus 281 plThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk 329 (347)
T KOG1442|consen 281 PLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVK 329 (347)
T ss_pred cceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHH
Confidence 8888887777778888889999999999999999999999999988654
No 52
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.65 E-value=1.5e-06 Score=83.96 Aligned_cols=135 Identities=13% Similarity=0.091 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhccC-------cCHHHHHHHHHHHHHHHHHHHHHHhCCC-C---------CC---Ch
Q 016434 115 LLEWAVLVSPFFFWGTAMVAMKEVLPK-------AGTFFVAAFRLIPAGLLLITFASSQGRK-L---------PS---GF 174 (389)
Q Consensus 115 ~~g~l~l~~a~~~~~~~~~~~k~~~~~-------~~p~~~~~~R~~~~~l~~~~~~~~~~~~-~---------~~---~~ 174 (389)
..|.++.++++++|+...+..|...++ .++..+..+...++.++++|+....+.. . .. ..
T Consensus 193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~ 272 (350)
T PTZ00343 193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK 272 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence 569999999999999999999987764 4577777777888888888876643211 0 00 00
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhh
Q 016434 175 NAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLE 249 (389)
Q Consensus 175 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~ 249 (389)
......++.+.+...+.+.+.+++++++++...++...+.|+++.++++++++|+++..+++|.++++.|+.+-.
T Consensus 273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs 347 (350)
T PTZ00343 273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS 347 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence 111122222333333333444579999999999999999999999999999999999999999999999998754
No 53
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.65 E-value=2.4e-07 Score=75.72 Aligned_cols=74 Identities=20% Similarity=0.319 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHH--HhCCCCCHHHHHHHHHHHHHHHHhhccCC
Q 016434 315 LLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFL--YLGETFSPLQLVGAAVTVVAIYLVNFRGS 388 (389)
Q Consensus 315 l~~~g~~~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~--~~ge~~~~~~~~G~~lIi~g~~l~~~~~~ 388 (389)
.++.|+++.++++.+|.+++++.+++.+.++..+.+++..+.++. +|||++++.+++|.++|++|++++.++++
T Consensus 50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 567888999999999999999999999999999998888888874 89999999999999999999999987654
No 54
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.62 E-value=1.3e-06 Score=71.42 Aligned_cols=120 Identities=17% Similarity=0.106 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 016434 117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA 196 (389)
Q Consensus 117 g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 196 (389)
++++++++.++-+..-++.|...++.+..+..... ...+. .. .+....+..|+++..+++.++.
T Consensus 3 ~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~--~~~~~----~~----------~~p~~~i~lgl~~~~la~~~w~ 66 (129)
T PRK02971 3 GYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDF--IAALL----AF----------GLALRAVLLGLAGYALSMLCWL 66 (129)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHH--HHHHH----HH----------hccHHHHHHHHHHHHHHHHHHH
Confidence 57788888888888889999887766543322211 00000 00 1111256777888888999999
Q ss_pred HHhhcCChhHHHHHHhhHHHHHHHHHHH--HcCCCCcHHHHHHHHHHHHHhHHhhccC
Q 016434 197 QGLQRTSAGLGSVIIDSQPLSVAVLAAL--LFGESIGLVGAGGLVLGVIGLLLLEAPA 252 (389)
Q Consensus 197 ~al~~~~~~~a~~i~~~~Pv~~~lla~l--~l~Er~~~~~~~g~~l~~~Gv~ll~~~~ 252 (389)
+++++.|++.+..+....++++.+.++. ++||++++.+++|++++++|++++..++
T Consensus 67 ~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 67 KALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 9999999999999999999889888885 8999999999999999999999998754
No 55
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.58 E-value=5.6e-07 Score=72.20 Aligned_cols=77 Identities=18% Similarity=0.525 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccC
Q 016434 310 SDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 310 ~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 387 (389)
+.+...+..|+++...++.+++.++++.+ +.+.++..+.|+++.++++++++|+++..+++|.+++++|++++...+
T Consensus 32 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 32 KPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD 108 (113)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 34445556676666689999999999999 588899999999999999999999999999999999999999988654
No 56
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.53 E-value=1e-06 Score=70.28 Aligned_cols=68 Identities=10% Similarity=0.128 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Q 016434 318 TSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 385 (389)
Q Consensus 318 ~g~~~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~ 385 (389)
.++++.++++.++..++++.+.+.+-.+.++.++++.++++++|||++++.+++|.++|++|++++..
T Consensus 42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 34467788999999999999999999999999999999999999999999999999999999998765
No 57
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.52 E-value=6.7e-06 Score=69.43 Aligned_cols=130 Identities=20% Similarity=0.200 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhccC-------cCHHHHHHHHHHHHHHHHHHHHHHhCCCCC--------C-----ChhH
Q 016434 117 EWAVLVSPFFFWGTAMVAMKEVLPK-------AGTFFVAAFRLIPAGLLLITFASSQGRKLP--------S-----GFNA 176 (389)
Q Consensus 117 g~l~l~~a~~~~~~~~~~~k~~~~~-------~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~--------~-----~~~~ 176 (389)
|.++.+.+.++.+...+..|...++ .++.++.......+.+++.+.+...+.... . ..+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 4577889999999999988876543 679999999999999999888776554320 0 1233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHH
Q 016434 177 WVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLL 247 (389)
Q Consensus 177 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~l 247 (389)
+...+..|++. ...+...+..++++++...+++...-.+++.+++.++++|+++..+++|++++++|+.+
T Consensus 81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 44445555555 66677999999999999999999999999999999999999999999999999999875
No 58
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.52 E-value=2.3e-06 Score=72.25 Aligned_cols=104 Identities=18% Similarity=0.305 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHhhcCcccccccccC-------CHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHhhhhhHHHHH
Q 016434 281 MVIGGLPLMVISVLNHDPVYGESVKEL-------TSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFA 353 (389)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a 353 (389)
...+.+.+.+...+.+++......... +...+..++..| +...+-....+..+++.+|...++...++.+..
T Consensus 43 ~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~ 121 (153)
T PF03151_consen 43 SPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSG-LLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILV 121 (153)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHH-HHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHH
Confidence 445556666666666665532211111 234455555555 444456666688999999999999999999999
Q ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Q 016434 354 SIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 385 (389)
Q Consensus 354 ~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~ 385 (389)
+++++++|||+++..+++|.++.+.|.++|++
T Consensus 122 i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 122 ILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 99999999999999999999999999998864
No 59
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.47 E-value=3.2e-06 Score=78.03 Aligned_cols=72 Identities=17% Similarity=0.340 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Q 016434 313 LALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 385 (389)
Q Consensus 313 ~~l~~~g~~~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~ 385 (389)
..+...| +...+.+.+++.++++.+++.++.+.++.|+++.++++++++|+++..+++|.++.++|++++..
T Consensus 71 ~~~~~~g-~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~ 142 (256)
T TIGR00688 71 LSLLLCG-LLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV 142 (256)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 3344445 44677899999999999999999999999999999999999999999999999999999987743
No 60
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.42 E-value=1e-07 Score=84.04 Aligned_cols=258 Identities=18% Similarity=0.145 Sum_probs=180.3
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 016434 117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA 196 (389)
Q Consensus 117 g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 196 (389)
.++..++-++.||........ -.-+|.+.+..-.+.+.++.+.+.+.. .+ ......+...++.|++. ..++..++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k--~GG~p~qQ~lGtT~GALifaiiv~~~~-~p-~~T~~~~iv~~isG~~W-s~GQ~~Qf 77 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANK--FGGKPYQQTLGTTLGALIFAIIVFLFV-SP-ELTLTIFIVGFISGAFW-SFGQANQF 77 (288)
T ss_pred hHHHHHHHHHHhcccceeeee--cCCChhHhhhhccHHHHHHHHHHheee-cC-ccchhhHHHHHHhhhHh-hhhhhhhh
Confidence 467788899999998865431 235688888877666666665555542 22 23446666667777765 77778999
Q ss_pred HHhhcCChhHHHHH-HhhHHHHHHHHHHHHcCCCCcHHH----HHHHHHHHHHhHHhhccCC---CCCCccchhhhHHHH
Q 016434 197 QGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVG----AGGLVLGVIGLLLLEAPAF---DESNSSLWGSGEWWM 268 (389)
Q Consensus 197 ~al~~~~~~~a~~i-~~~~Pv~~~lla~l~l~Er~~~~~----~~g~~l~~~Gv~ll~~~~~---~~~~~~~~~~G~~~~ 268 (389)
.|+++.+++.+..+ ..++-+-+.+++.+.++|-.+..+ .+++++.+.|+.+-...+. +.++.+...+|....
T Consensus 78 ka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L 157 (288)
T COG4975 78 KAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVIL 157 (288)
T ss_pred hheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeee
Confidence 99999999999999 778889999999999999887665 4677888899999888762 334444566788888
Q ss_pred HHHHHHHHHHH---------------HHHHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016434 269 LLAAQSMAVGT---------------HMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYS 333 (389)
Q Consensus 269 l~aa~~~a~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~a 333 (389)
+.+.+.|-.|. ...+|.+......-..... ...+...|. -...|+ .=+++...+..+
T Consensus 158 ~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali~~~~~~~------~~~~K~t~~-nii~G~-~Wa~GNl~ml~a 229 (288)
T COG4975 158 LISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALILGFFKME------KRFNKYTWL-NIIPGL-IWAIGNLFMLLA 229 (288)
T ss_pred eeeccceeeeEeeeccccccchhhhhHHHHHHHHHHHHHhhcccc------cchHHHHHH-HHhhHH-HHHhhHHHHHHh
Confidence 88998888877 1122222222211111100 111233333 334553 344567777888
Q ss_pred hccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHH----HHHHHHHHHHHHHhhccC
Q 016434 334 ATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQ----LVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 334 l~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~----~~G~~lIi~g~~l~~~~~ 387 (389)
.++.+.++.=.++.+..+++.+-++++++|+=+..+ ++|.++++.|..+....|
T Consensus 230 ~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~~K 287 (288)
T COG4975 230 AQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGIAK 287 (288)
T ss_pred hhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhheec
Confidence 888888888788889999999999999999988766 567888888887776554
No 61
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.41 E-value=1.9e-06 Score=77.80 Aligned_cols=173 Identities=13% Similarity=-0.002 Sum_probs=104.9
Q ss_pred hHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCC-----------------CCC-----Cccchh
Q 016434 205 GLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAF-----------------DES-----NSSLWG 262 (389)
Q Consensus 205 ~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~-----------------~~~-----~~~~~~ 262 (389)
..........++++++.++.+.+||++..++++.++...|+......+. +.. ......
T Consensus 5 Pa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~~~ 84 (222)
T TIGR00803 5 PIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGNPV 84 (222)
T ss_pred cchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccccHH
Confidence 3445567778888888888888888888888888888888765332210 010 001222
Q ss_pred hhHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHhhcCccccc--c-cccCCHHHHHHHHHHH
Q 016434 263 SGEWWMLLAAQSMAVGT--------------------HMVIGGLPLMVISVLNHDPVYGE--S-VKELTSSDILALLYTS 319 (389)
Q Consensus 263 ~G~~~~l~aa~~~a~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~l~~~g 319 (389)
.|....+.+..+-+... ..+++.+... ............ . ....+...|..+
T Consensus 85 ~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 159 (222)
T TIGR00803 85 VGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTF-SVLLWSDGTLISNFGFFIGYPTAVWIVG---- 159 (222)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHH-HHHhhcccchhhccCcccCCchHHHHHH----
Confidence 34333333333322222 1122222111 111111111100 0 111223333222
Q ss_pred HHHHHHHHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHh
Q 016434 320 IFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLV 383 (389)
Q Consensus 320 ~~~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~ 383 (389)
+..+++..+....+++.++...+....++++++.++++++|||+++..+++|..+++.|++++
T Consensus 160 -~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 160 -LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred -HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 345556677788899999999999999999999999999999999999999999999987653
No 62
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.38 E-value=5.1e-05 Score=68.10 Aligned_cols=250 Identities=12% Similarity=0.064 Sum_probs=161.9
Q ss_pred HHHHHHhccC--cC--HHHHHHHHHHHHHHHHHHHHHHhCC-CCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCChhH
Q 016434 132 MVAMKEVLPK--AG--TFFVAAFRLIPAGLLLITFASSQGR-KLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGL 206 (389)
Q Consensus 132 ~~~~k~~~~~--~~--p~~~~~~R~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~ 206 (389)
.....+..+. +. -+.+++.++++-..+.+..+..-+. +...+ |+.+..++++. .+.+.+..-++.|++--.
T Consensus 59 Gy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP---~rtY~~la~~t-~gtmGLsn~SlgYLNYPt 134 (367)
T KOG1582|consen 59 GYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIP---WRTYVILAFLT-VGTMGLSNGSLGYLNYPT 134 (367)
T ss_pred HHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceecc---hhHhhhhHhhh-hhccccCcCccccccCcH
Confidence 3444444432 44 4677888777665555444322211 11222 33344444443 444567778888988877
Q ss_pred HHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHH-------
Q 016434 207 GSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGT------- 279 (389)
Q Consensus 207 a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~------- 279 (389)
-.+...+--+=+++.+.++-|.|+++.+.++..+...|.++....+.... ++....|..+.-.|-++-|.-.
T Consensus 135 QviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~s-PNF~~~Gv~mIsgALl~DA~iGNvQEk~m 213 (367)
T KOG1582|consen 135 QVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTS-PNFNLIGVMMISGALLADAVIGNVQEKAM 213 (367)
T ss_pred HHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccC-CCcceeeHHHHHHHHHHHHHhhHHHHHHH
Confidence 77777777777788888999999999999999999999999988773222 2222347666555555544333
Q ss_pred -------------HHHHHHHHHHHHHHhhcCccccccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHhh
Q 016434 280 -------------HMVIGGLPLMVISVLNHDPVYGESV-KELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSL 345 (389)
Q Consensus 280 -------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~~s~~ 345 (389)
...+|...++......++-.-.... ...+.+...+.+... ..+.++......-++..+|..++.+
T Consensus 214 ~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s-~~gylG~~~VLalI~~fGA~~aatv 292 (367)
T KOG1582|consen 214 KMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFS-LAGYLGIVFVLALIKLFGALIAATV 292 (367)
T ss_pred hhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHH-HHhHhhHHHHHHHHHHhchhHHHHH
Confidence 3344444444443333332211111 122333444444444 3455566665666778899999999
Q ss_pred hhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccC
Q 016434 346 TFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 346 ~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 387 (389)
....-.+++++++++|..+++.+..-|..+|+.|+++..+.|
T Consensus 293 TTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 293 TTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 999999999999999999999999999999999999987766
No 63
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=98.34 E-value=1.8e-05 Score=68.90 Aligned_cols=251 Identities=16% Similarity=0.176 Sum_probs=162.2
Q ss_pred HHHHHHHhccC--cC-HHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHH
Q 016434 131 AMVAMKEVLPK--AG-TFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLG 207 (389)
Q Consensus 131 ~~~~~k~~~~~--~~-p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a 207 (389)
+.+..|+.... ++ -+.+.+++.+.-.+-+..+-+.+-.+.+. ++.+.++...++... ....--.+++|.++..-
T Consensus 21 mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~--t~aK~WfpiSfLLv~-MIyt~SKsLqyL~vpiY 97 (309)
T COG5070 21 MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRL--TKAKKWFPISFLLVV-MIYTSSKSLQYLAVPIY 97 (309)
T ss_pred HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhheeh--hhhhhhcCHHHHHHH-HHHhcccceeeeeeeHH
Confidence 34556665553 44 45555666555444443333222222322 233333334444322 22244679999999999
Q ss_pred HHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCC--CccchhhhHHHHHHHHHHHHHHH------
Q 016434 208 SVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDES--NSSLWGSGEWWMLLAAQSMAVGT------ 279 (389)
Q Consensus 208 ~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~--~~~~~~~G~~~~l~aa~~~a~~~------ 279 (389)
++...++.+.++....+++|.|++-.+....++.+..-+...+.+.... .....+.|+++...-.+..+.+.
T Consensus 98 TiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkr 177 (309)
T COG5070 98 TIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKR 177 (309)
T ss_pred HHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHhHHHHHHHHHHh
Confidence 9999999999999999999999999999999988888777776652111 11245668887777666666555
Q ss_pred ----------HHHHHHHH----HHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHhh
Q 016434 280 ----------HMVIGGLP----LMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSL 345 (389)
Q Consensus 280 ----------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~~s~~ 345 (389)
.+.+.-++ ++...++.+++....-....+.....++...|+...+++| +-.+.++-.+.+..+.+
T Consensus 178 i~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy-~saWcvrVtSSTtySMv 256 (309)
T COG5070 178 IKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISY-CSAWCVRVTSSTTYSMV 256 (309)
T ss_pred hcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhh-ccceeEeehhhhHHHHH
Confidence 44444433 4444455555443211223345555566666644444444 34677888899999999
Q ss_pred hhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Q 016434 346 TFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 385 (389)
Q Consensus 346 ~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~ 385 (389)
..+.-.-..+.|.++|+|+.+...+....+=..+..++..
T Consensus 257 GALNKlp~alaGlvffdap~nf~si~sillGflsg~iYav 296 (309)
T COG5070 257 GALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAV 296 (309)
T ss_pred HHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998887776666666553
No 64
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=98.23 E-value=3.2e-06 Score=75.92 Aligned_cols=236 Identities=14% Similarity=0.136 Sum_probs=147.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhc-CChhHHHHHHhhHHHHHHHH
Q 016434 144 TFFVAAFRLIPAGLLLITFASSQG-RKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQR-TSAGLGSVIIDSQPLSVAVL 221 (389)
Q Consensus 144 p~~~~~~R~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~a~~i~~~~Pv~~~ll 221 (389)
--.+++.++++-++-.+++.-... .+.+.+.|++...+. + ....+.+-++++++ ++.-.=.++..-.++.++++
T Consensus 33 gNLITFaqFlFia~eGlif~skf~~~k~kiplk~Y~i~V~---m-FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~ 108 (330)
T KOG1583|consen 33 GNLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDYAITVA---M-FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL 108 (330)
T ss_pred eeehHHHHHHHHHHhceeeeccccccCCCCchhhhheehh---e-eeeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence 466778888877776666542111 112223333332222 1 23344677889988 44444445578899999999
Q ss_pred HHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCC-----------C---CCccchhhhHHHHHHHHHHHH---HHH-----
Q 016434 222 AALLFGESIGLVGAGGLVLGVIGLLLLEAPAFD-----------E---SNSSLWGSGEWWMLLAAQSMA---VGT----- 279 (389)
Q Consensus 222 a~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~-----------~---~~~~~~~~G~~~~l~aa~~~a---~~~----- 279 (389)
+++++|+|++.+|..++++.-+|+++....+.. + .+...+..|..+...+-+..| +|.
T Consensus 109 g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~ 188 (330)
T KOG1583|consen 109 GWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQ 188 (330)
T ss_pred HHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999987764411 1 112234456655555544433 222
Q ss_pred --------HHHHHHHHHHHHHHhhcCcccc--------c-----ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 016434 280 --------HMVIGGLPLMVISVLNHDPVYG--------E-----SVKELTSSDILALLYTSIFGSAISYGVYFYSATKGS 338 (389)
Q Consensus 280 --------~~~~~~~~~~~~~~~~~~~~~~--------~-----~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~ 338 (389)
.+++.-.+.+|.-++..++... + .....-+..|.+++... +....|.-..+.--.+.+
T Consensus 189 kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~-L~Qy~CikgVy~L~te~~ 267 (330)
T KOG1583|consen 189 KYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNV-LTQYFCIKGVYILTTETS 267 (330)
T ss_pred HhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHH-HHHHHHHHhhhhhhceec
Confidence 4555555555555544433210 0 01111244455554332 222222222233334557
Q ss_pred hhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Q 016434 339 LTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 384 (389)
Q Consensus 339 a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~ 384 (389)
+-+++++..+.-.++.+++++.|+.+++++-|+|++++..|.+++.
T Consensus 268 sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 268 SLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred ceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 7788889999999999999999999999999999999999999876
No 65
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=98.17 E-value=0.0066 Score=57.06 Aligned_cols=270 Identities=13% Similarity=0.090 Sum_probs=172.2
Q ss_pred hHHHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCC------CCChhHHHHHHHHHHHH
Q 016434 114 MLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKL------PSGFNAWVSIFLFALVD 187 (389)
Q Consensus 114 ~~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~ 187 (389)
-..|+++-.+..++-++.++-.|. .++.+-...=.+..+++.+++-.....-..+. ..+........+.|++-
T Consensus 5 ii~Gii~h~iGg~~~~sfy~P~kk-vk~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~lW 83 (344)
T PF06379_consen 5 IILGIIFHAIGGFASGSFYVPFKK-VKGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVLW 83 (344)
T ss_pred HHHHHHHHHHHHHHhhhhccchhh-cCCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHHH
Confidence 357888888999999998887775 34455444444555555554433332222211 22335667778888887
Q ss_pred HHHHHHHHHHHhhcCChhHHHHH-HhhHHHHHHHHHHHHcC-------CCCcHHHHHHHHHHHHHhHHhhccCC------
Q 016434 188 ASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFG-------ESIGLVGAGGLVLGVIGLLLLEAPAF------ 253 (389)
Q Consensus 188 ~~~~~~~~~~al~~~~~~~a~~i-~~~~Pv~~~lla~l~l~-------Er~~~~~~~g~~l~~~Gv~ll~~~~~------ 253 (389)
..++ ..|=.+++|+..+...-| .-+..++-.++-.++.+ ++-....++|++++++|+++....+.
T Consensus 84 GIGg-ltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~~~ 162 (344)
T PF06379_consen 84 GIGG-LTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEKEL 162 (344)
T ss_pred hcch-hhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhhhh
Confidence 4444 688899999999998866 77788888777666643 33356789999999999999987551
Q ss_pred -CCCCccchhhhHHHHHHHHHHHHHHH------------------------------HHHHHHHHHHHHHHhhcC--ccc
Q 016434 254 -DESNSSLWGSGEWWMLLAAQSMAVGT------------------------------HMVIGGLPLMVISVLNHD--PVY 300 (389)
Q Consensus 254 -~~~~~~~~~~G~~~~l~aa~~~a~~~------------------------------~~~~~~~~~~~~~~~~~~--~~~ 300 (389)
+......+.+|.+.++++++..+..+ .+.-+.+..+..++.... ...
T Consensus 163 ~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc~~~l~~~k~~ 242 (344)
T PF06379_consen 163 GEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYCLILLAKNKNW 242 (344)
T ss_pred ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHHHHHHhhcCCC
Confidence 11122346789999999999888777 222333444555444311 111
Q ss_pred c--cccccCC---HHHHHHHHHHHHHHHHHHHHHHHHHhccCC----hhHHHhhhhhHHHHHHHHHHHHhCCC------C
Q 016434 301 G--ESVKELT---SSDILALLYTSIFGSAISYGVYFYSATKGS----LTKLSSLTFLTPMFASIFGFLYLGET------F 365 (389)
Q Consensus 301 ~--~~~~~~~---~~~~~~l~~~g~~~~~l~~~l~~~al~~~~----a~~~s~~~~~~pv~a~i~~~~~~ge~------~ 365 (389)
. .+..... .......+..| +.=..++++|-++-.+.+ ..--.+.+.+..+++-+++++ ++|. .
T Consensus 243 s~~~d~~~~~~~~~~N~~~~aLaG-~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-lkEWKg~s~kt 320 (344)
T PF06379_consen 243 SWKGDYSVAKPPLLKNYLFCALAG-VLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-LKEWKGASKKT 320 (344)
T ss_pred ccccccccccchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-HHHhccCCccc
Confidence 0 0111111 12333333344 333447777777665555 445566788899999999965 5763 3
Q ss_pred CHHHHHHHHHHHHHHHHhhccC
Q 016434 366 SPLQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 366 ~~~~~~G~~lIi~g~~l~~~~~ 387 (389)
-...++|.++++.++.++.+..
T Consensus 321 ~~vl~~G~~vlI~s~~ivG~G~ 342 (344)
T PF06379_consen 321 IRVLVLGIAVLILSVVIVGYGM 342 (344)
T ss_pred HHHHHHHHHHHHHHHHHHhccc
Confidence 3566899999999999887654
No 66
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.12 E-value=6.4e-05 Score=68.77 Aligned_cols=121 Identities=10% Similarity=-0.131 Sum_probs=93.7
Q ss_pred hhhHHHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHH
Q 016434 112 LGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCF 191 (389)
Q Consensus 112 ~~~~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 191 (389)
.+..++++.++++.+.+..+..+.|. .+.+++...+-+.+.-.+....+....+ .+...|..++-++.|++. ..+
T Consensus 134 ~~~~kgi~~Ll~stigy~~Y~~~~~~--~~~~~~~~~lPqaiGm~i~a~i~~~~~~--~~~~~k~~~~nil~G~~w-~ig 208 (269)
T PF06800_consen 134 SNMKKGILALLISTIGYWIYSVIPKA--FHVSGWSAFLPQAIGMLIGAFIFNLFSK--KPFFEKKSWKNILTGLIW-GIG 208 (269)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHh--cCCChhHhHHHHHHHHHHHHHHHhhccc--ccccccchHHhhHHHHHH-HHH
Confidence 34467899999999999999999885 5578888888776555554444544332 222235556667778776 666
Q ss_pred HHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHH
Q 016434 192 QGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGG 237 (389)
Q Consensus 192 ~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g 237 (389)
+.+++.+.+....+.+-.+..+.+++..+.+.+++||+-+++++..
T Consensus 209 nl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~ 254 (269)
T PF06800_consen 209 NLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIY 254 (269)
T ss_pred HHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHH
Confidence 6899999999999999999999999999999999999999887654
No 67
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.11 E-value=1.8e-05 Score=72.85 Aligned_cols=255 Identities=14% Similarity=0.121 Sum_probs=154.1
Q ss_pred ccchhhHHHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHH
Q 016434 109 VMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDA 188 (389)
Q Consensus 109 ~~~~~~~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 188 (389)
.+..+...|.++.+.+-++.|....+-|....+... ...| ..+.+.+.. ++ +....|.+..
T Consensus 14 ~~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~---~~~r-------------a~~gg~~yl-~~--~~Ww~G~ltm 74 (335)
T KOG2922|consen 14 RMSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA---SGLR-------------AGEGGYGYL-KE--PLWWAGMLTM 74 (335)
T ss_pred hhccCceeeeeehhhccEEEeeehhhhHHHHHHHhh---hccc-------------ccCCCcchh-hh--HHHHHHHHHH
Confidence 344455677888888888888888888865543221 1111 111222222 22 2333455556
Q ss_pred HHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccc-h------
Q 016434 189 SCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSL-W------ 261 (389)
Q Consensus 189 ~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~-~------ 261 (389)
..+...-+.|+.+.|++..+.+.++..++.++++..+++||++....+|++++++|-.++..-...+..... .
T Consensus 75 ~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~ 154 (335)
T KOG2922|consen 75 IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELA 154 (335)
T ss_pred HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHh
Confidence 666777789999999999999999999999999999999999999999999999998777764421111110 0
Q ss_pred -hhhH---HHHHHHHHHHHHHH---------HHHHHHHHHHH--------------HHHhhcCcccccccccCCHHHHHH
Q 016434 262 -GSGE---WWMLLAAQSMAVGT---------HMVIGGLPLMV--------------ISVLNHDPVYGESVKELTSSDILA 314 (389)
Q Consensus 262 -~~G~---~~~l~aa~~~a~~~---------~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~ 314 (389)
..+. .......++.-++. .+.+..+..+. +-..+.+. .....+..|..
T Consensus 155 ~~~~Fliy~~~iil~~~il~~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~-----~ql~~~~ty~~ 229 (335)
T KOG2922|consen 155 TEPGFLVYVIIIILIVLILIFFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGN-----NQLFYPLTWIF 229 (335)
T ss_pred cCccHHHHHHHHHHHHHHHheeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCC-----cccccHHHHHH
Confidence 0011 11111111110110 01111111110 00111111 11123355555
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCChhHHHhhhh-hHHHHHHHHHHHHhCCCC--CH----HHHHHHHHHHHHHHHhhccC
Q 016434 315 LLYTSIFGSAISYGVYFYSATKGSLTKLSSLTF-LTPMFASIFGFLYLGETF--SP----LQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 315 l~~~g~~~~~l~~~l~~~al~~~~a~~~s~~~~-~~pv~a~i~~~~~~ge~~--~~----~~~~G~~lIi~g~~l~~~~~ 387 (389)
++... .|......-.++|++..+++.+.++.| +--.++++-+.++|+|.- +. ...+|+..|+.|+++....|
T Consensus 230 ~l~~~-~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~k 308 (335)
T KOG2922|consen 230 LLVVA-TCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTK 308 (335)
T ss_pred HHHHH-HHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeec
Confidence 55444 445555555699999999999998865 456677888899998853 32 45788899999999887655
Q ss_pred C
Q 016434 388 S 388 (389)
Q Consensus 388 ~ 388 (389)
.
T Consensus 309 d 309 (335)
T KOG2922|consen 309 D 309 (335)
T ss_pred c
Confidence 3
No 68
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.95 E-value=0.00038 Score=55.18 Aligned_cols=68 Identities=21% Similarity=0.273 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHhhcCChhHHHHH-HhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccC
Q 016434 185 LVDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA 252 (389)
Q Consensus 185 ~~~~~~~~~~~~~al~~~~~~~a~~i-~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~ 252 (389)
+.+..+++.++..++++.|.+.+-.+ ....-+.+.+++++++||++++.+++|+.+.++|++++...+
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 44446677788999999999999988 668999999999999999999999999999999999997644
No 69
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.94 E-value=0.00033 Score=66.63 Aligned_cols=140 Identities=10% Similarity=0.040 Sum_probs=108.1
Q ss_pred hhhHHHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCC-C---CCCChhHHHHHHHHHHHH
Q 016434 112 LGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGR-K---LPSGFNAWVSIFLFALVD 187 (389)
Q Consensus 112 ~~~~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~-~---~~~~~~~~~~~~~~g~~~ 187 (389)
.++.+|-++.++++.++|...++.+...++.+..++..+--+++.++..+.+...++ . ...+.+....++.. .++
T Consensus 164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~-~~~ 242 (334)
T PF06027_consen 164 SNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGY-ALC 242 (334)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHH-HHH
Confidence 455789999999999999999999999999998888877777777777665543322 1 22333333333333 333
Q ss_pred HHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccC
Q 016434 188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA 252 (389)
Q Consensus 188 ~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~ 252 (389)
....+.+.-..++.+++....+=.-++.++..+++.++.|+++++..++|.+++++|+++....+
T Consensus 243 lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 243 LFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence 45566677788889998877777888899999999999999999999999999999999987654
No 70
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.91 E-value=0.00031 Score=56.45 Aligned_cols=69 Identities=26% Similarity=0.372 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHhhcCChhHHHHH-HhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccC
Q 016434 184 ALVDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA 252 (389)
Q Consensus 184 g~~~~~~~~~~~~~al~~~~~~~a~~i-~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~ 252 (389)
.+.+...++.++..++++.|.+.+-.+ ....-+.+++++.+++||+++..+++|+.++++|++++...+
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 344456677889999999999999988 478999999999999999999999999999999999987654
No 71
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.89 E-value=4.6e-05 Score=60.21 Aligned_cols=110 Identities=15% Similarity=0.028 Sum_probs=78.5
Q ss_pred HHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 016434 122 VSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQR 201 (389)
Q Consensus 122 ~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~ 201 (389)
++..++||+..++.|...+..++..-.. |..-.... . ..++ ++.+.=+++ ..+...|++.+.+
T Consensus 2 l~Vg~~WG~Tnpfik~g~~~~~~~~~~~-~~~~~~~~----L----------l~n~-~y~ipf~lN-q~GSv~f~~~L~~ 64 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSSGLEKVKASL-QLLQEIKF----L----------LLNP-KYIIPFLLN-QSGSVLFFLLLGS 64 (113)
T ss_pred eeehHHhcCchHHHHHHHhhcCCccchH-HHHHHHHH----H----------HHhH-HHHHHHHHH-HHHHHHHHHHHhc
Confidence 4567899999999998887655333321 32221111 0 0111 222222333 5555789999999
Q ss_pred CChhHHHHH-HhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHh
Q 016434 202 TSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLL 248 (389)
Q Consensus 202 ~~~~~a~~i-~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll 248 (389)
.+.+.+..+ +.+.=+|+++.++++.+|..++..++|+++.++|+.+.
T Consensus 65 ~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 65 ADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred CCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 999999999 68999999999988888888999999999999998764
No 72
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=97.88 E-value=0.0002 Score=65.38 Aligned_cols=122 Identities=16% Similarity=0.239 Sum_probs=93.4
Q ss_pred hhHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHH
Q 016434 263 SGEWWMLLAAQSMAVGT-----------------HMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI 325 (389)
Q Consensus 263 ~G~~~~l~aa~~~a~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l 325 (389)
.|.++++.+-+.|+..- ..+++...+............-.+ ...+++.+......++. -..
T Consensus 7 ~Gil~~l~Ay~lwG~lp~y~kll~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~-~~~~p~~~~~~~l~a~l-i~~ 84 (293)
T COG2962 7 KGILLALLAYLLWGLLPLYFKLLEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ-LLKQPKTLLMLALTALL-IGL 84 (293)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHhCcHHHHHHHHHHHH-HHH
Confidence 49999999999998766 445555544444444333221111 23356677766666644 455
Q ss_pred HHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcc
Q 016434 326 SYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 386 (389)
Q Consensus 326 ~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~ 386 (389)
...+|..|.+..+..+++...++.|++.+++|.++++|+++..|++..++..+|+....+.
T Consensus 85 nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 85 NWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999887654
No 73
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.82 E-value=0.00019 Score=56.90 Aligned_cols=68 Identities=9% Similarity=0.171 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHhccCChhHHHhh-hhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccC
Q 016434 320 IFGSAISYGVYFYSATKGSLTKLSSL-TFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 320 ~~~~~l~~~l~~~al~~~~a~~~s~~-~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 387 (389)
+++.++++.++.+++++.+.+.+=.+ ..+..+...+.++++|||++++.+++|.++|++|++.....+
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 35667799999999999999887665 568899999999999999999999999999999999987643
No 74
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.77 E-value=0.00097 Score=55.29 Aligned_cols=129 Identities=16% Similarity=0.088 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHhHHHHHHHhccCcC-HHHHHHHHHHHHHHHHHHHHHHhCCC-CCCChhHHHHHHHHHHHHHHHHHHHH
Q 016434 118 WAVLVSPFFFWGTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRK-LPSGFNAWVSIFLFALVDASCFQGFL 195 (389)
Q Consensus 118 ~l~l~~a~~~~~~~~~~~k~~~~~~~-p~~~~~~R~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (389)
.++.+++..+-+....++-...+..+ |...+++.+..+.+.+..+....+++ ....++..++..+-|+++ .....+.
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG-~~~V~~~ 81 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLG-VFFVLSN 81 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHH-HHHHHHH
Confidence 34556667777777777776677776 99999999999999998887777653 222223334455566665 6666788
Q ss_pred HHHhhcCChhHHHHHHhh-HHHHHHHHHHH----HcCCCCcHHHHHHHHHHHHHhHH
Q 016434 196 AQGLQRTSAGLGSVIIDS-QPLSVAVLAAL----LFGESIGLVGAGGLVLGVIGLLL 247 (389)
Q Consensus 196 ~~al~~~~~~~a~~i~~~-~Pv~~~lla~l----~l~Er~~~~~~~g~~l~~~Gv~l 247 (389)
.+...+.+++.+..+..+ +-+...+++.+ .-++++++.+.+|+++.++|+.+
T Consensus 82 ~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 82 IILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 899999999999988554 66667777764 35789999999999999999864
No 75
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.75 E-value=0.00024 Score=55.24 Aligned_cols=67 Identities=27% Similarity=0.344 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHhhcCChhHHHHH-HhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhcc
Q 016434 185 LVDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP 251 (389)
Q Consensus 185 ~~~~~~~~~~~~~al~~~~~~~a~~i-~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~ 251 (389)
+.+...++.++..++++.|.+.+-.+ .....+.+++.+++++||+.+..+++++.+.++|++.+...
T Consensus 37 ~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 37 IVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 33446677788999999999999887 88899999999999999999999999999999999988653
No 76
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.74 E-value=0.00027 Score=56.77 Aligned_cols=69 Identities=20% Similarity=0.300 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHhccCChhHHHhh-hhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccC
Q 016434 319 SIFGSAISYGVYFYSATKGSLTKLSSL-TFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 319 g~~~~~l~~~l~~~al~~~~a~~~s~~-~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 387 (389)
.+++.++++.++.+++|+.+.+.+=.+ ..+..+...+.++++|||++++.+++|.++|++|++.+....
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 345667799999999999999887666 468999999999999999999999999999999999887643
No 77
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.73 E-value=0.00075 Score=63.86 Aligned_cols=135 Identities=15% Similarity=0.178 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhccC--cCHHHHHHHHHHHHHHHHHHHHHH--hCCCC------CCChhHHHHHHHHHHH
Q 016434 117 EWAVLVSPFFFWGTAMVAMKEVLPK--AGTFFVAAFRLIPAGLLLITFASS--QGRKL------PSGFNAWVSIFLFALV 186 (389)
Q Consensus 117 g~l~l~~a~~~~~~~~~~~k~~~~~--~~p~~~~~~R~~~~~l~~~~~~~~--~~~~~------~~~~~~~~~~~~~g~~ 186 (389)
|+++++++.++-|......+...++ .++.+..++-..++.++.++.+.. .+... ...+..+..+++..+.
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~ 234 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT 234 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence 8999999999999999999887764 679999999999998888777766 32211 1122344455555555
Q ss_pred HHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccC
Q 016434 187 DASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA 252 (389)
Q Consensus 187 ~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~ 252 (389)
+ ..++.+.++-.++.++...+++..+--+++.+++.+++++++++.+|.|+++.+.|..+-....
T Consensus 235 ~-~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~ 299 (303)
T PF08449_consen 235 G-ALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAK 299 (303)
T ss_pred H-HHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhh
Confidence 5 5555677788999999999999999999999999999999999999999999999998866543
No 78
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.66 E-value=0.0018 Score=51.15 Aligned_cols=63 Identities=17% Similarity=0.216 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHhhcCChhHHHHH-HhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhh
Q 016434 187 DASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLE 249 (389)
Q Consensus 187 ~~~~~~~~~~~al~~~~~~~a~~i-~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~ 249 (389)
+...++.+...++++.|.+.+-.+ .....+.+.+.+.+++||++++.+++++.+.+.|++++.
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 345666788999999999999988 668899999999999999999999999999999999864
No 79
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.61 E-value=0.00064 Score=52.90 Aligned_cols=67 Identities=18% Similarity=0.261 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHhccCChhHH-HhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccC
Q 016434 321 FGSAISYGVYFYSATKGSLTKL-SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 321 ~~~~l~~~l~~~al~~~~a~~~-s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 387 (389)
++..++|.+...++|+.+.+.+ ++-.-...+...+.++++|||+.++.+++|.+++++|++......
T Consensus 38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s 105 (106)
T COG2076 38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS 105 (106)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence 4566789999999999988665 566788999999999999999999999999999999999987654
No 80
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.57 E-value=0.00082 Score=52.76 Aligned_cols=66 Identities=20% Similarity=0.229 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHhhcCChhHHHHH-HhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhc
Q 016434 185 LVDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA 250 (389)
Q Consensus 185 ~~~~~~~~~~~~~al~~~~~~~a~~i-~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~ 250 (389)
+.+...++.+...++++.|.+.+-.+ .....+.+.+.+.+++||++++.+++++.+.++|++++..
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 33446667788999999999999988 6689999999999999999999999999999999998754
No 81
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.56 E-value=0.00079 Score=52.85 Aligned_cols=67 Identities=21% Similarity=0.248 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHhccCChhHH-HhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccC
Q 016434 321 FGSAISYGVYFYSATKGSLTKL-SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 321 ~~~~l~~~l~~~al~~~~a~~~-s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 387 (389)
++.++++.+..+++|+.|.+.+ ++-.-+..+.+.+.++++|||++++.+++|.++|++|++..+..+
T Consensus 37 ~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~~ 104 (105)
T PRK11431 37 TAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLST 104 (105)
T ss_pred HHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhccC
Confidence 5567799999999999998765 445668899999999999999999999999999999999887654
No 82
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.53 E-value=4.7e-05 Score=68.22 Aligned_cols=136 Identities=14% Similarity=0.099 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHh-CCCCCCChhHHHHHHHHHHHHHHHHHH
Q 016434 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQ-GRKLPSGFNAWVSIFLFALVDASCFQG 193 (389)
Q Consensus 115 ~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~ 193 (389)
.+|.+..+.+++.-+...+..|+..++.+....+.+-.+++.+.-...+..- .-..|..+++|+..+.+|+++ .++++
T Consensus 190 ~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~cgkdr~l~~~lGvfg-figQI 268 (346)
T KOG4510|consen 190 IPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQLPHCGKDRWLFVNLGVFG-FIGQI 268 (346)
T ss_pred CCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccceecCccccceEEEEEehhhh-hHHHH
Confidence 4456778888888888889999887776644333333444444433333222 334566779999999999998 77888
Q ss_pred HHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhcc
Q 016434 194 FLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP 251 (389)
Q Consensus 194 ~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~ 251 (389)
+...++|.--++..++..++..+|..+...+|++|-++++.|.|+++.+...+.+...
T Consensus 269 llTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~ 326 (346)
T KOG4510|consen 269 LLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALK 326 (346)
T ss_pred HHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHH
Confidence 9999999999999999999999999999999999999999999998887776665543
No 83
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.45 E-value=0.0013 Score=52.02 Aligned_cols=65 Identities=6% Similarity=0.114 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHhccCChhHH-HhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Q 016434 321 FGSAISYGVYFYSATKGSLTKL-SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 385 (389)
Q Consensus 321 ~~~~l~~~l~~~al~~~~a~~~-s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~ 385 (389)
++.++++++..+++|+.|.+.+ ++..-+..+.+.+.++++|||++++.+++|.++|+.|++....
T Consensus 43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lkl 108 (109)
T PRK10650 43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIKL 108 (109)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 5567789999999999998766 4446688899999999999999999999999999999998753
No 84
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.29 E-value=0.003 Score=48.60 Aligned_cols=55 Identities=20% Similarity=0.237 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHhhcCChhHHHHH-HhhHHHHHHHHHHHHcCCCCcHHHHHHHHHH
Q 016434 187 DASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLG 241 (389)
Q Consensus 187 ~~~~~~~~~~~al~~~~~~~a~~i-~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~ 241 (389)
+...++.++..++++.|.+.+-.+ ..+..+.+.+++.+++||+++..+++|+.++
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 446667789999999999999877 5699999999999999999999999998763
No 85
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=97.04 E-value=0.009 Score=54.95 Aligned_cols=142 Identities=15% Similarity=0.146 Sum_probs=113.1
Q ss_pred cccchhhHHHHHHHHHHHHHHHhHHHHHHHhccC--cCHHHHHHHHHHHHHHHHHHHHHHhCCCC------CCChhHHHH
Q 016434 108 QVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPK--AGTFFVAAFRLIPAGLLLITFASSQGRKL------PSGFNAWVS 179 (389)
Q Consensus 108 ~~~~~~~~~g~l~l~~a~~~~~~~~~~~k~~~~~--~~p~~~~~~R~~~~~l~~~~~~~~~~~~~------~~~~~~~~~ 179 (389)
++.+.+...|++++....++=|........+.+. ++++++++.-.+..++.-....+..+... ...++-++-
T Consensus 164 ~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~D 243 (327)
T KOG1581|consen 164 KSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFD 243 (327)
T ss_pred ccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHH
Confidence 3444566789999998888888888777766665 77999999988888888777766555432 124455566
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhc
Q 016434 180 IFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA 250 (389)
Q Consensus 180 ~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~ 250 (389)
.+++..++ +.++.+.|+-++.-++-.-++|+.+==+++.+++.+..+.+++..+|.|+.+.+.|+.+=..
T Consensus 244 i~l~s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~ 313 (327)
T KOG1581|consen 244 ILLYSTCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEIL 313 (327)
T ss_pred HHHHHHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHH
Confidence 77777776 77778889999998888888889999999999999999999999999999999999877443
No 86
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=97.00 E-value=0.0099 Score=56.21 Aligned_cols=140 Identities=11% Similarity=0.061 Sum_probs=107.1
Q ss_pred hhhHHHHHHHHHHHHHHHhHHHHHHHhccC----cC-HHHHHHHHHHHHHHHHHHHHH----HhCCCCC-CChhHHHHHH
Q 016434 112 LGMLLEWAVLVSPFFFWGTAMVAMKEVLPK----AG-TFFVAAFRLIPAGLLLITFAS----SQGRKLP-SGFNAWVSIF 181 (389)
Q Consensus 112 ~~~~~g~l~l~~a~~~~~~~~~~~k~~~~~----~~-p~~~~~~R~~~~~l~~~~~~~----~~~~~~~-~~~~~~~~~~ 181 (389)
.+...|.++.+++++++|.+.++.|.-.++ ++ +..+-+ --++..++++|..+ ....++. +...+....+
T Consensus 243 ~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGf-vGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv 321 (416)
T KOG2765|consen 243 SRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGF-VGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVV 321 (416)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHH-HHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeee
Confidence 456889999999999999999998876543 44 333322 23455555554332 2222332 2335556677
Q ss_pred HHHHHHHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccC
Q 016434 182 LFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA 252 (389)
Q Consensus 182 ~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~ 252 (389)
+.++++....-.++.+|.-.+++-.+++-..++.-..++...++-+.++++..++|.+.+++|-+++..++
T Consensus 322 ~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 322 FNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred HhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 88899999999999999999999999988777777788899888899999999999999999999999876
No 87
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.98 E-value=0.0029 Score=48.65 Aligned_cols=56 Identities=20% Similarity=0.269 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHhccCChhHHHh-hhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 016434 321 FGSAISYGVYFYSATKGSLTKLSS-LTFLTPMFASIFGFLYLGETFSPLQLVGAAVT 376 (389)
Q Consensus 321 ~~~~l~~~l~~~al~~~~a~~~s~-~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lI 376 (389)
.+.++++.++.+++|+.+.+.+=. ...+..+...+.++++|||++++.+++|..+|
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 466778999999999999998844 45699999999999999999999999999876
No 88
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=96.82 E-value=0.0046 Score=58.23 Aligned_cols=135 Identities=16% Similarity=0.168 Sum_probs=108.9
Q ss_pred hHHHHHHHHHHHHHHHhHHHHHHHhcc----CcCHHHHHHHHHHHHHHHHH-HHHHHhCCCCC-------CChhHHHHHH
Q 016434 114 MLLEWAVLVSPFFFWGTAMVAMKEVLP----KAGTFFVAAFRLIPAGLLLI-TFASSQGRKLP-------SGFNAWVSIF 181 (389)
Q Consensus 114 ~~~g~l~l~~a~~~~~~~~~~~k~~~~----~~~p~~~~~~R~~~~~l~~~-~~~~~~~~~~~-------~~~~~~~~~~ 181 (389)
...|.+..+.+.+.+++..++.|.... ++|+........-++...++ |+....+.... .+.. ....+
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence 377999999999999999999988774 38899999999999999888 88777554322 2223 33444
Q ss_pred HHHHHHHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhc
Q 016434 182 LFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA 250 (389)
Q Consensus 182 ~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~ 250 (389)
+..++. ...+...|..+.++++-.-++....--.++.+.++++++|++++.+..|.+++++|+.+=..
T Consensus 240 ~~sv~~-f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 240 LNSVLA-FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHH-HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 444554 55556889999999999999998888888888999999999999999999999999988654
No 89
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.73 E-value=0.014 Score=54.94 Aligned_cols=66 Identities=17% Similarity=0.316 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Q 016434 319 SIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 384 (389)
Q Consensus 319 g~~~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~ 384 (389)
|.+..+++..+...|+...|++.++++..+..++..+++..++||+++..+++|+++++.|..++.
T Consensus 56 G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 56 GLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 444556677788889999999999999999999999999999999999999999999999987654
No 90
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.71 E-value=0.062 Score=49.11 Aligned_cols=207 Identities=14% Similarity=0.129 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 016434 117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA 196 (389)
Q Consensus 117 g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 196 (389)
|++..+++.+++|++++-.|. .+..|++.+-.+.+....+.-+.+...++.+. -..+..+-|.+. +.++.+..
T Consensus 1 G~~a~~va~~~fGs~~vPvK~-~~~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~-----f~p~amlgG~lW-~~gN~~~v 73 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKK-FDTGDGFFFQWVMCSGIFLVGLVVNLILGFPP-----FYPWAMLGGALW-ATGNILVV 73 (254)
T ss_pred CchhHHHHHHHhcccceeeEe-ccCCCcHHHHHHHHHHHHHHHHHHHHhcCCCc-----ceeHHHhhhhhh-hcCceeeh
Confidence 456778999999999999995 44567777777766666666565555543221 122334444554 66778889
Q ss_pred HHhhcCChhHHHHHHhhHHHHHH-HHHHH-HcCCC-----CcHHHHHHHHHHHHHhHHhhccCC----------------
Q 016434 197 QGLQRTSAGLGSVIIDSQPLSVA-VLAAL-LFGES-----IGLVGAGGLVLGVIGLLLLEAPAF---------------- 253 (389)
Q Consensus 197 ~al~~~~~~~a~~i~~~~Pv~~~-lla~l-~l~Er-----~~~~~~~g~~l~~~Gv~ll~~~~~---------------- 253 (389)
-.++....+.+..+-.+.-+++- ..+.+ +++++ -.+..++|++++++|..+...-..
T Consensus 74 pii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~~~~~ 153 (254)
T PF07857_consen 74 PIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEETPLSI 153 (254)
T ss_pred hHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCCCcccccccccccc
Confidence 99999999999999666444433 33322 33322 256778899999999887764210
Q ss_pred C------CC-----Ccc---------chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccCCHHHHH
Q 016434 254 D------ES-----NSS---------LWGSGEWWMLLAAQSMAVGTHMVIGGLPLMVISVLNHDPVYGESVKELTSSDIL 313 (389)
Q Consensus 254 ~------~~-----~~~---------~~~~G~~~~l~aa~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (389)
+ ++ +.+ ....|..+++++++.|+ ..+.|+..+.+..... +....+.-...
T Consensus 154 ~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyG---------s~fvPv~Yi~~~~~~y-~~as~~~ldYv 223 (254)
T PF07857_consen 154 EDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYG---------SNFVPVIYIQDHPDIY-PGASQNGLDYV 223 (254)
T ss_pred ccccccccccccccccccccccccccchhHhHHHHHHHHHHHh---------cccchHHHHHhCcccc-CCCCCcchhee
Confidence 0 00 000 24468888888888887 5566777666654310 11122333334
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCChh
Q 016434 314 ALLYTSIFGSAISYGVYFYSATKGSLT 340 (389)
Q Consensus 314 ~l~~~g~~~~~l~~~l~~~al~~~~a~ 340 (389)
.--+.|++.+-..|++.|...+|-+|.
T Consensus 224 Fs~f~GIfltSt~~F~~Y~~~~rn~P~ 250 (254)
T PF07857_consen 224 FSHFSGIFLTSTVYFVIYCIIKRNKPK 250 (254)
T ss_pred HHHHhhHHHHHHHHHHHHHHhhcCCCC
Confidence 445677777766777777777776653
No 91
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.63 E-value=0.012 Score=53.79 Aligned_cols=77 Identities=21% Similarity=0.260 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccC
Q 016434 310 SDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 310 ~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~ 387 (389)
+.......=+ +...+...+.+.++++.+|+...++..++.+++.++.++++|.+++..||++..++.+|+.+.+...
T Consensus 15 ~~~~~~~vPA-~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~ 91 (244)
T PF04142_consen 15 KDTLKLAVPA-LLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS 91 (244)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence 3333333333 4456677888999999999999999999999999999999999999999999999999999887653
No 92
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.42 E-value=0.16 Score=42.27 Aligned_cols=134 Identities=13% Similarity=0.070 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhccCcC-HHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--hhHHHHHHHHHHHHHHHHH
Q 016434 116 LEWAVLVSPFFFWGTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRKLPSG--FNAWVSIFLFALVDASCFQ 192 (389)
Q Consensus 116 ~g~l~l~~a~~~~~~~~~~~k~~~~~~~-p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~ 192 (389)
..++..+.+..+-.....++-.+.+..+ |..-.+..+..+.+++..+.+.+.+..... .+..+|..+-|.++ +..-
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~~v 83 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AIFV 83 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hhhh
Confidence 3455556666666666666665566665 999999999999888877776644333222 34445555556554 4444
Q ss_pred HHHHHHhhcCChhHHHHH-HhhHHHHHHHHHHHHc----CCCCcHHHHHHHHHHHHHhHHhhc
Q 016434 193 GFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLF----GESIGLVGAGGLVLGVIGLLLLEA 250 (389)
Q Consensus 193 ~~~~~al~~~~~~~a~~i-~~~~Pv~~~lla~l~l----~Er~~~~~~~g~~l~~~Gv~ll~~ 250 (389)
........+..++....+ ..-+-+...+++.+=. +.+++..+++|+++.++|+.++..
T Consensus 84 t~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 84 TSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred hhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 444566666666666554 4445555566655332 478899999999999999555443
No 93
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.35 E-value=0.21 Score=47.80 Aligned_cols=138 Identities=13% Similarity=0.049 Sum_probs=85.6
Q ss_pred hhhHHHHHHHHHHHHHHHhHH-------HHHHHhc-cCcCHHHHHHHHHH---HHHHHH-HHHHHH---hCCCCC----C
Q 016434 112 LGMLLEWAVLVSPFFFWGTAM-------VAMKEVL-PKAGTFFVAAFRLI---PAGLLL-ITFASS---QGRKLP----S 172 (389)
Q Consensus 112 ~~~~~g~l~l~~a~~~~~~~~-------~~~k~~~-~~~~p~~~~~~R~~---~~~l~~-~~~~~~---~~~~~~----~ 172 (389)
.+..+|++.++++.+..++.. +..+... .+.++.....-.++ ++.++. ..++.+ ++++.+ +
T Consensus 170 ~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~ 249 (345)
T PRK13499 170 FNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADF 249 (345)
T ss_pred cchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhc
Confidence 445678999999999999988 4444321 23555555554444 333333 334432 222211 1
Q ss_pred --C----hhHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHH---HH-hhHHHHHHHHHHHHcCCCCc------HHHHH
Q 016434 173 --G----FNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSV---II-DSQPLSVAVLAALLFGESIG------LVGAG 236 (389)
Q Consensus 173 --~----~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~---i~-~~~Pv~~~lla~l~l~Er~~------~~~~~ 236 (389)
+ .++.....+.|++. ..++.++..+-+..+.+.+.. +. .+..++..+-+. ++||+-+ +..++
T Consensus 250 ~~~~~~~~~n~l~~~l~G~~W-~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~ 327 (345)
T PRK13499 250 SLAKPLLITNVLLSALAGVMW-YLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSL 327 (345)
T ss_pred cccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHH
Confidence 1 23333335556554 666678888888886665555 65 666677777665 6999877 66688
Q ss_pred HHHHHHHHhHHhhcc
Q 016434 237 GLVLGVIGLLLLEAP 251 (389)
Q Consensus 237 g~~l~~~Gv~ll~~~ 251 (389)
|+++.++|+.++...
T Consensus 328 G~vliI~g~~lig~~ 342 (345)
T PRK13499 328 GCVVIILAANIVGLG 342 (345)
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999998888764
No 94
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.28 E-value=0.049 Score=48.93 Aligned_cols=59 Identities=12% Similarity=0.015 Sum_probs=54.0
Q ss_pred HHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHH
Q 016434 189 SCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLL 247 (389)
Q Consensus 189 ~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~l 247 (389)
+.+..+..+.+++.+...-++...+.++++.+++.++++|+++..++.|+.+.+.|+.+
T Consensus 163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 55556889999999999999999999999999999999999999999999999998753
No 95
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=95.77 E-value=0.0085 Score=53.48 Aligned_cols=117 Identities=20% Similarity=0.229 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHHHH
Q 016434 264 GEWWMLLAAQSMAVGT---------------HMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYG 328 (389)
Q Consensus 264 G~~~~l~aa~~~a~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~ 328 (389)
..+.+++=++.|+..- .+.++++.+....+++..+. .+...+..-...|.+- .+++.
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~GG~p~qQ~lGtT~GALifaiiv~~~~~p~-------~T~~~~iv~~isG~~W-s~GQ~ 74 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFGGKPYQQTLGTTLGALIFAIIVFLFVSPE-------LTLTIFIVGFISGAFW-SFGQA 74 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecCCChhHhhhhccHHHHHHHHHHheeecCc-------cchhhHHHHHHhhhHh-hhhhh
Confidence 4556666667776544 56677777766665553322 3444554444445443 45899
Q ss_pred HHHHHhccCChhHHHhhh-hhHHHHHHHHHHHHhCCCCCHHHH----HHHHHHHHHHHHhhccCC
Q 016434 329 VYFYSATKGSLTKLSSLT-FLTPMFASIFGFLYLGETFSPLQL----VGAAVTVVAIYLVNFRGS 388 (389)
Q Consensus 329 l~~~al~~~~a~~~s~~~-~~~pv~a~i~~~~~~ge~~~~~~~----~G~~lIi~g~~l~~~~~~ 388 (389)
.+.++++..+.+++.++. -+|.|-+.++++++|||..++.+. +..++++.|+++..++++
T Consensus 75 ~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 75 NQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 999999999999999985 789999999999999999997663 455788899988887764
No 96
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=95.32 E-value=0.41 Score=39.62 Aligned_cols=96 Identities=11% Similarity=0.051 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhHHHhh-hhhHHHHHHHHHHH
Q 016434 281 MVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSL-TFLTPMFASIFGFL 359 (389)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~~s~~-~~~~pv~a~i~~~~ 359 (389)
...+.+.+.....+..+.... . ..+.+.|.+ .|.+..++...+.....++.+++..... ..-|.+.+.+++.+
T Consensus 38 ~~~G~i~~~i~~~~~~~~~~~-~--~~~~p~w~~---lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~f 111 (138)
T PF04657_consen 38 FGVGFILLLIILLITGRPSLA-S--LSSVPWWAY---LGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHF 111 (138)
T ss_pred HHHHHHHHHHHHHHhcccccc-h--hccCChHHh---ccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 455555555555555543211 1 112233333 3445566677777888999998877766 56788888888875
Q ss_pred ----HhCCCCCHHHHHHHHHHHHHHHH
Q 016434 360 ----YLGETFSPLQLVGAAVTVVAIYL 382 (389)
Q Consensus 360 ----~~ge~~~~~~~~G~~lIi~g~~l 382 (389)
.-++++++.+++|.+++++|+++
T Consensus 112 G~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 112 GLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 34578999999999999999864
No 97
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.31 E-value=0.11 Score=46.19 Aligned_cols=137 Identities=12% Similarity=0.022 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhccC--cCHHHHHHHHHHHHHHHHHHHHHHhCCCC------CCChhHHHHHHHHHHH
Q 016434 115 LLEWAVLVSPFFFWGTAMVAMKEVLPK--AGTFFVAAFRLIPAGLLLITFASSQGRKL------PSGFNAWVSIFLFALV 186 (389)
Q Consensus 115 ~~g~l~l~~a~~~~~~~~~~~k~~~~~--~~p~~~~~~R~~~~~l~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~ 186 (389)
..|-++++++..+=|+........-.+ -+..++++.-.+.+.+.+-.-++..+.-+ .+.+..++.+.+.++.
T Consensus 171 g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~ 250 (337)
T KOG1580|consen 171 GFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIA 250 (337)
T ss_pred chHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHH
Confidence 346667777777777777665444333 22344444444555554433332222111 1223566667777777
Q ss_pred HHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccC
Q 016434 187 DASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA 252 (389)
Q Consensus 187 ~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~ 252 (389)
+ ++++.|.+.-..+-++-.-+++..+--+|+.+.+.++++.+++.+||+|.++.+.|..+=...+
T Consensus 251 s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~G 315 (337)
T KOG1580|consen 251 S-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG 315 (337)
T ss_pred H-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence 6 6777788999999999899999999999999999999999999999999999999987765433
No 98
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=94.97 E-value=0.064 Score=42.52 Aligned_cols=62 Identities=18% Similarity=0.253 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHhccCChhHHHhh-hhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Q 016434 321 FGSAISYGVYFYSATKGSLTKLSSL-TFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYL 382 (389)
Q Consensus 321 ~~~~l~~~l~~~al~~~~a~~~s~~-~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l 382 (389)
.....+-.+|+..+.+.+-+.+.++ +.+.-+++.+.++++.+|..+...++|+++|++|+.+
T Consensus 49 ~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 49 LLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 3444466677888999999999999 5999999999999888888899999999999999865
No 99
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=94.71 E-value=0.33 Score=45.31 Aligned_cols=135 Identities=13% Similarity=0.070 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhccC--cCHHHHHHHHHHHHHHHHHHHHHHhCCCC--------CCChhHHHHHHHHH
Q 016434 115 LLEWAVLVSPFFFWGTAMVAMKEVLPK--AGTFFVAAFRLIPAGLLLITFASSQGRKL--------PSGFNAWVSIFLFA 184 (389)
Q Consensus 115 ~~g~l~l~~a~~~~~~~~~~~k~~~~~--~~p~~~~~~R~~~~~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~g 184 (389)
..|+.++....+.-....+..|+..+. .+-+.+.++..+...+.+.......+... ......+....+.+
T Consensus 156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lSc 235 (314)
T KOG1444|consen 156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSC 235 (314)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHH
Confidence 447888888888888888888877764 66889999999999888877775554311 12224455666777
Q ss_pred HHHHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhc
Q 016434 185 LVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA 250 (389)
Q Consensus 185 ~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~ 250 (389)
+++..+++ +.++..+..++...++.....-..+.+...++.++++++...+|+.++++|-++=..
T Consensus 236 v~gf~isy-~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~ 300 (314)
T KOG1444|consen 236 VMGFGISY-TSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSY 300 (314)
T ss_pred HHHHHHHH-HHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhh
Confidence 77766665 778999999988888888777777777777888899999999999999999776554
No 100
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=94.42 E-value=0.32 Score=37.48 Aligned_cols=112 Identities=17% Similarity=0.136 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHhHHHHHHHhccCcC----H--HHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHH
Q 016434 119 AVLVSPFFFWGTAMVAMKEVLPKAG----T--FFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ 192 (389)
Q Consensus 119 l~l~~a~~~~~~~~~~~k~~~~~~~----p--~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 192 (389)
.-++...++||...++.|......+ + ....+.|-...... .+.+.+.-.++ -++.
T Consensus 6 ~~lvaVgllWG~Tnplirrgs~g~~~v~~~~~k~~~~lqe~~tl~l------------------~w~Y~iPFllN-qcgS 66 (125)
T KOG4831|consen 6 DKLVAVGLLWGATNPLIRRGSLGWDKVKSSSRKIMIALQEMKTLFL------------------NWEYLIPFLLN-QCGS 66 (125)
T ss_pred HHHHHHHHHHccccHHHHHHHhhHhhccCchHHHHHHHHHHHHHHH------------------hHHHHHHHHHH-HhhH
Confidence 3467888999999999997665422 2 22222222211111 11222233334 3344
Q ss_pred HHHHHHhhcCChhHHHHH-HhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhh
Q 016434 193 GFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLE 249 (389)
Q Consensus 193 ~~~~~al~~~~~~~a~~i-~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~ 249 (389)
.+||.-+++++.+.+..+ ++++-.|+++.+..+-.|....+.++|..+.++|+.+..
T Consensus 67 aly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 67 ALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 688999999999999988 777889999999877667777888999999999987643
No 101
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.39 E-value=1.2 Score=37.26 Aligned_cols=103 Identities=9% Similarity=0.062 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChh-HHHhhhhhHHHHHHHHHHH
Q 016434 281 MVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLT-KLSSLTFLTPMFASIFGFL 359 (389)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~-~~s~~~~~~pv~a~i~~~~ 359 (389)
...|.+.+..+.++.+.... .. ...+...|.++ |.+..++-.+.......+.+++ .......-|.+.+++++.+
T Consensus 42 f~vGt~~L~~l~l~~~~~~~-~a-~~~~~pwW~~~---GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~f 116 (150)
T COG3238 42 FLVGTVLLLILLLIKQGHPG-LA-AVASAPWWAWI---GGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHF 116 (150)
T ss_pred HHHHHHHHHHHHHHhcCCCc-hh-hccCCchHHHH---ccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhh
Confidence 45555555555555433221 11 12233344433 3233443444445566666664 4555678888999998876
Q ss_pred HhC----CCCCHHHHHHHHHHHHHHHHhhccCC
Q 016434 360 YLG----ETFSPLQLVGAAVTVVAIYLVNFRGS 388 (389)
Q Consensus 360 ~~g----e~~~~~~~~G~~lIi~g~~l~~~~~~ 388 (389)
=+. .+++...++|.+++++|+++..++++
T Consensus 117 G~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~~ 149 (150)
T COG3238 117 GWFGVPKRPLNLPRILGILLVLAGILLARRFGA 149 (150)
T ss_pred cccCCCcCCCCHHHHHHHHHHHHHHHHhccccc
Confidence 544 57999999999999999877776654
No 102
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=93.00 E-value=0.081 Score=45.71 Aligned_cols=61 Identities=18% Similarity=0.354 Sum_probs=56.1
Q ss_pred HHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcc
Q 016434 326 SYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 386 (389)
Q Consensus 326 ~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~ 386 (389)
+.++|..++++.+|+.++.+..-.-.+..+++++++|+++....++..++.+.|++.+.+.
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~ 126 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA 126 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence 5677889999999999999999999999999999999999999999999999998877643
No 103
>PRK02237 hypothetical protein; Provisional
Probab=92.92 E-value=0.92 Score=35.32 Aligned_cols=48 Identities=10% Similarity=0.113 Sum_probs=42.3
Q ss_pred HHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCC
Q 016434 341 KLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 388 (389)
Q Consensus 341 ~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~~ 388 (389)
..+.+.-.-.+.++++++.+-|++|+...++|+++.++|+.++....|
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR 108 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR 108 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence 346677888999999999999999999999999999999988876654
No 104
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.66 E-value=0.044 Score=50.98 Aligned_cols=67 Identities=15% Similarity=0.242 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Q 016434 318 TSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 384 (389)
Q Consensus 318 ~g~~~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~ 384 (389)
.|.+..+++-.+.+.++...+++.++++..++.+...+++..+++|.++....+|+++.++|..++.
T Consensus 69 ~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV 135 (335)
T KOG2922|consen 69 AGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIV 135 (335)
T ss_pred HHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEE
Confidence 4667778888888899999999999999999999999999999999999999999999998876654
No 105
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=91.93 E-value=1.4 Score=39.14 Aligned_cols=132 Identities=12% Similarity=0.159 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhcc--CcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC------CChhHHHHHHHHHHHHH
Q 016434 117 EWAVLVSPFFFWGTAMVAMKEVLP--KAGTFFVAAFRLIPAGLLLITFASSQGRKLP------SGFNAWVSIFLFALVDA 188 (389)
Q Consensus 117 g~l~l~~a~~~~~~~~~~~k~~~~--~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~ 188 (389)
|++++..-.+.-+......|.-.+ +....+.+++..+++..+++.+-...+.+.+ .+.....+.++.|++..
T Consensus 156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~sv 235 (309)
T COG5070 156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSV 235 (309)
T ss_pred ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHh
Confidence 566666555555555555554433 4568899999999999888877665544322 23344456777777776
Q ss_pred HHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhh
Q 016434 189 SCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLE 249 (389)
Q Consensus 189 ~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~ 249 (389)
+..+ |.-|.++-++...-+++.++.-.-.++-+.++++|+.+...+.++++++...++-.
T Consensus 236 giSy-~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYa 295 (309)
T COG5070 236 GISY-CSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYA 295 (309)
T ss_pred hhhh-ccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHH
Confidence 6664 77899999999999999999999999999999999999999999999877654433
No 106
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=91.90 E-value=1.2 Score=42.24 Aligned_cols=64 Identities=17% Similarity=0.199 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Q 016434 322 GSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 385 (389)
Q Consensus 322 ~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~ 385 (389)
..++...+++.++.+.+|++..+...+..+.+.++.+++++++++..||...++..+|+.+++.
T Consensus 101 iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~ 164 (345)
T KOG2234|consen 101 IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQL 164 (345)
T ss_pred HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhc
Confidence 3444556889999999999999999999999999999999999999999999999999999884
No 107
>PRK02237 hypothetical protein; Provisional
Probab=91.66 E-value=3.2 Score=32.41 Aligned_cols=39 Identities=8% Similarity=-0.021 Sum_probs=32.7
Q ss_pred hHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhcc
Q 016434 213 SQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP 251 (389)
Q Consensus 213 ~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~ 251 (389)
...+...+..+.+-|+|+++.+++|..++++|+.++...
T Consensus 68 vyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 68 VYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 345556677888899999999999999999999988653
No 108
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=90.67 E-value=3.2 Score=32.26 Aligned_cols=53 Identities=13% Similarity=0.012 Sum_probs=39.0
Q ss_pred hhcCChhHHHHH-HhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhcc
Q 016434 199 LQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP 251 (389)
Q Consensus 199 l~~~~~~~a~~i-~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~ 251 (389)
++-.+.+++-.- -....+.+.+..+.+-|+|+.+.+++|..++++|+.++...
T Consensus 51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred cCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 343333333322 33456667778888899999999999999999999998764
No 109
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=90.32 E-value=2.1 Score=33.32 Aligned_cols=47 Identities=17% Similarity=0.269 Sum_probs=42.5
Q ss_pred HHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCC
Q 016434 342 LSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 388 (389)
Q Consensus 342 ~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~~ 388 (389)
.+.+.-.-.+.+.++++.+-|++|+..+++|+++.+.|+.++.+..|
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 46677888999999999999999999999999999999999887765
No 110
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=89.55 E-value=1.6 Score=39.90 Aligned_cols=60 Identities=8% Similarity=0.104 Sum_probs=43.9
Q ss_pred chhhHHHHHHHHHHHHHHHhHHHHHHHhccCc--------CH----HHHHHHHHHHHHHHHHHHHHHhCCCC
Q 016434 111 ELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKA--------GT----FFVAAFRLIPAGLLLITFASSQGRKL 170 (389)
Q Consensus 111 ~~~~~~g~l~l~~a~~~~~~~~~~~k~~~~~~--------~p----~~~~~~R~~~~~l~~~~~~~~~~~~~ 170 (389)
.+++..|+++.+++.+++|.+++-.++..++- ++ +.....-++.+.+.++.++..+|.+.
T Consensus 178 ~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~~~y~~as~~~ldYvFs~f~GIfltSt~~F~~Y~~~~rn~P 249 (254)
T PF07857_consen 178 RKKRIVGIILAVFAGVLYGSNFVPVIYIQDHPDIYPGASQNGLDYVFSHFSGIFLTSTVYFVIYCIIKRNKP 249 (254)
T ss_pred ccchhHhHHHHHHHHHHHhcccchHHHHHhCccccCCCCCcchheeHHHHhhHHHHHHHHHHHHHHhhcCCC
Confidence 34468899999999999999998888776653 23 33444456667777888888877554
No 111
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=89.35 E-value=4.2 Score=37.26 Aligned_cols=137 Identities=13% Similarity=0.081 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhccC--cCHHHHHHHHHHHHHHHHHHHHHHhCCCC-------CCChhHHHHHHHHHH
Q 016434 115 LLEWAVLVSPFFFWGTAMVAMKEVLPK--AGTFFVAAFRLIPAGLLLITFASSQGRKL-------PSGFNAWVSIFLFAL 185 (389)
Q Consensus 115 ~~g~l~l~~a~~~~~~~~~~~k~~~~~--~~p~~~~~~R~~~~~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~ 185 (389)
..|+.+.-++.++=+...-......+. -+..+++++-+.++.++++..+...+.-+ ..+++.....++.+.
T Consensus 189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~ 268 (367)
T KOG1582|consen 189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL 268 (367)
T ss_pred eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH
Confidence 344544444444444444443333332 34678888888888888877776665432 224456666666666
Q ss_pred HHHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccC
Q 016434 186 VDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA 252 (389)
Q Consensus 186 ~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~ 252 (389)
.+ .++..+...-++.-++..++++...--..+.+++++++.++++....-+.++.+.|+++=..+.
T Consensus 269 ~g-ylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 269 AG-YLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred Hh-HhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 55 4444343333445677777777777778899999999999999999999999999999988776
No 112
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=88.40 E-value=1 Score=41.29 Aligned_cols=65 Identities=14% Similarity=0.234 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Q 016434 321 FGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 385 (389)
Q Consensus 321 ~~~~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~ 385 (389)
+|-..+-.+.+.++...+|+-...+.-...+|..+++..+++.+++..+|+|...+++|++++..
T Consensus 94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~ 158 (372)
T KOG3912|consen 94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS 158 (372)
T ss_pred HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence 45555677788999999999999999999999999999999999999999999999999988754
No 113
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=86.93 E-value=0.69 Score=42.28 Aligned_cols=135 Identities=16% Similarity=0.138 Sum_probs=92.0
Q ss_pred hHHHHHHHHHHHHHHHhHHHHHHHhccCcC--HHHHHHHHHHHHHHHHHHHHHHhCCC-------CCCChhHHHHHHHHH
Q 016434 114 MLLEWAVLVSPFFFWGTAMVAMKEVLPKAG--TFFVAAFRLIPAGLLLITFASSQGRK-------LPSGFNAWVSIFLFA 184 (389)
Q Consensus 114 ~~~g~l~l~~a~~~~~~~~~~~k~~~~~~~--p~~~~~~R~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~g 184 (389)
...|.++.+.+.+.-+.+.+.+|..+...+ -+.++++..+.+.++++|.+...+.- ..+..+-|..+.+.|
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg 262 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG 262 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence 367899999999999999999996665544 78999999999999999998876531 122345555666667
Q ss_pred HHHHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhh
Q 016434 185 LVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLE 249 (389)
Q Consensus 185 ~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~ 249 (389)
+++...++ ...+=++-+++-.-.+=...-...-.+++..+++|.-+...|-+-++.++|-.+-.
T Consensus 263 lfgF~mgy-vTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT 326 (347)
T KOG1442|consen 263 LFGFAMGY-VTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYT 326 (347)
T ss_pred HHHHHhhh-eeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHH
Confidence 77655554 22333444544322211222333445677889999999988988888887765543
No 114
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=85.80 E-value=17 Score=34.08 Aligned_cols=133 Identities=14% Similarity=0.042 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhccC-----cCHHHHHHHHHHHHHHHHHHHHHHhCCCCC---------CC----hhH
Q 016434 115 LLEWAVLVSPFFFWGTAMVAMKEVLPK-----AGTFFVAAFRLIPAGLLLITFASSQGRKLP---------SG----FNA 176 (389)
Q Consensus 115 ~~g~l~l~~a~~~~~~~~~~~k~~~~~-----~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~---------~~----~~~ 176 (389)
..|..+..++.++-|.-..+++...++ -+|....+--.-.-.+.++|..+.-++... .+ .+.
T Consensus 163 i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv 242 (349)
T KOG1443|consen 163 IEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRV 242 (349)
T ss_pred ehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHH
Confidence 557777778888888888877776654 235544443333333333443333332211 11 122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHh
Q 016434 177 WVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLL 248 (389)
Q Consensus 177 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll 248 (389)
...+.+.|.+. ++.-.+-+.=+..++.-..++..---=+.+.+++..+++++++...|.|..++..|+.+=
T Consensus 243 ~g~i~l~g~la-F~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 243 IGLISLGGLLA-FLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHHHH-HHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 23333334333 222234455566777766666666677888899999999999999999999999999886
No 115
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=85.17 E-value=4.9 Score=31.21 Aligned_cols=51 Identities=24% Similarity=0.281 Sum_probs=35.7
Q ss_pred hccCChhHHHhhh-hhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Q 016434 334 ATKGSLTKLSSLT-FLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 384 (389)
Q Consensus 334 l~~~~a~~~s~~~-~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~ 384 (389)
.+..++.+.-+++ .....+=..++++++||++++..+.|.++++++++.+.
T Consensus 56 ~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF 107 (108)
T PF04342_consen 56 YQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFIF 107 (108)
T ss_pred ccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence 3444555555544 22333345667889999999999999999999987654
No 116
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=80.18 E-value=6.9 Score=30.26 Aligned_cols=48 Identities=10% Similarity=0.094 Sum_probs=40.4
Q ss_pred HHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCC
Q 016434 341 KLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 388 (389)
Q Consensus 341 ~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~~~~ 388 (389)
..+.+.-.-.+.+.++.+.+=|.+|+...++|.++-++|+.++....+
T Consensus 60 vYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 60 VYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred HHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 345567778899999999999999999999999999999887766543
No 117
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=76.51 E-value=3.2 Score=32.02 Aligned_cols=39 Identities=8% Similarity=-0.078 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccC
Q 016434 214 QPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA 252 (389)
Q Consensus 214 ~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~ 252 (389)
..+...+..+..-|.|+.+.+|+|.++|++|+.++....
T Consensus 68 yI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 68 YIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred HHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 445556667777899999999999999999998887643
No 118
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=75.76 E-value=24 Score=32.69 Aligned_cols=134 Identities=13% Similarity=0.116 Sum_probs=81.3
Q ss_pred hhhHHHHHHHHHHHHHHHhHHHHHHHhccC--cCHHHHHHHHHHHHHHHHHHHHH--------HhCCC-C--C----CCh
Q 016434 112 LGMLLEWAVLVSPFFFWGTAMVAMKEVLPK--AGTFFVAAFRLIPAGLLLITFAS--------SQGRK-L--P----SGF 174 (389)
Q Consensus 112 ~~~~~g~l~l~~a~~~~~~~~~~~k~~~~~--~~p~~~~~~R~~~~~l~~~~~~~--------~~~~~-~--~----~~~ 174 (389)
.....|+.++.++.+.-+.+........+. -++-|..++--.+....++.... ....+ . + .-+
T Consensus 160 ~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP 239 (330)
T KOG1583|consen 160 FWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVP 239 (330)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCcccc
Confidence 344667888888888888888877655554 44788888777766655544321 01110 0 0 112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhh----cCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhc
Q 016434 175 NAWVSIFLFALVDASCFQGFLAQGLQ----RTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA 250 (389)
Q Consensus 175 ~~~~~~~~~g~~~~~~~~~~~~~al~----~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~ 250 (389)
..|..++. +....+.| ..+.. .++.-..+++..+==++..+++.+.++..++++.|+|.++.+.|..+-..
T Consensus 240 ~~~~yLl~----n~L~Qy~C-ikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 240 SMWVYLLF----NVLTQYFC-IKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred HHHHHHHH----HHHHHHHH-HHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 33332222 21222222 22221 23334444556666778889999999999999999999999999887664
No 119
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.43 E-value=11 Score=28.78 Aligned_cols=32 Identities=22% Similarity=0.237 Sum_probs=28.6
Q ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Q 016434 354 SIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 385 (389)
Q Consensus 354 ~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~~ 385 (389)
..++++.++|++.+..+.|.++++.|+.++.+
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 45688899999999999999999999988765
No 120
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=68.05 E-value=80 Score=30.24 Aligned_cols=125 Identities=12% Similarity=0.059 Sum_probs=71.4
Q ss_pred hhhhHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHH
Q 016434 261 WGSGEWWMLLAAQSMAVGT-----------------HMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGS 323 (389)
Q Consensus 261 ~~~G~~~~l~aa~~~a~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 323 (389)
...|.++-.+++++.+.+. +.+++-++.-.+.....-|.+..-....+...+......|++ =
T Consensus 5 ii~Gii~h~iGg~~~~sfy~P~kkvk~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~l-W 83 (344)
T PF06379_consen 5 IILGIIFHAIGGFASGSFYVPFKKVKGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVL-W 83 (344)
T ss_pred HHHHHHHHHHHHHHhhhhccchhhcCCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHH-H
Confidence 3457777778888777766 222222222111222222332222334455566666666644 3
Q ss_pred HHHHHHHHHHhccCChhHHHhh-hhhHHHHHHHHHHHHhCC-------CCCHHHHHHHHHHHHHHHHhhcc
Q 016434 324 AISYGVYFYSATKGSLTKLSSL-TFLTPMFASIFGFLYLGE-------TFSPLQLVGAAVTVVAIYLVNFR 386 (389)
Q Consensus 324 ~l~~~l~~~al~~~~a~~~s~~-~~~~pv~a~i~~~~~~ge-------~~~~~~~~G~~lIi~g~~l~~~~ 386 (389)
+++-..|-.++|+++.+....+ .-+..+++.++--++.|+ +-....++|.++.++|+.+..+.
T Consensus 84 GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A 154 (344)
T PF06379_consen 84 GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA 154 (344)
T ss_pred hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence 4466667778888887655433 455556666665555432 33457799999999999988753
No 121
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=62.18 E-value=7.5 Score=30.18 Aligned_cols=59 Identities=25% Similarity=0.390 Sum_probs=46.5
Q ss_pred HHHHHHHHhccCChhHHHhh-hhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Q 016434 326 SYGVYFYSATKGSLTKLSSL-TFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 384 (389)
Q Consensus 326 ~~~l~~~al~~~~a~~~s~~-~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l~~ 384 (389)
+-.+|+.-+++.+-+.+.++ +.+.-.++.+.|..+-.|...-..++|..+++.|+.+..
T Consensus 65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 44566777888888888877 466888899999876555667788999999999988753
No 122
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=61.12 E-value=1.2e+02 Score=26.79 Aligned_cols=11 Identities=9% Similarity=0.159 Sum_probs=5.0
Q ss_pred HHHHhHHHHHH
Q 016434 126 FFWGTAMVAMK 136 (389)
Q Consensus 126 ~~~~~~~~~~k 136 (389)
++.|....+.+
T Consensus 95 ~~~gi~~~f~~ 105 (206)
T PF06570_consen 95 LLFGIMGFFSP 105 (206)
T ss_pred HHHHHHHHHhh
Confidence 44444444444
No 123
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=60.65 E-value=79 Score=24.68 Aligned_cols=51 Identities=12% Similarity=0.014 Sum_probs=34.3
Q ss_pred hhcCChhHHHHHH-hhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhh
Q 016434 199 LQRTSAGLGSVII-DSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLE 249 (389)
Q Consensus 199 l~~~~~~~a~~i~-~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~ 249 (389)
.+.-+.++--+++ -.+-..-+.++.+++||++++....|.++.+++|..+.
T Consensus 56 ~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF 107 (108)
T PF04342_consen 56 YQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFIF 107 (108)
T ss_pred ccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence 3334444444442 22333344677889999999999999999888877653
No 124
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=46.39 E-value=3.7 Score=38.22 Aligned_cols=111 Identities=10% Similarity=0.025 Sum_probs=69.4
Q ss_pred HHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---------------CCChhHHHHHHHHHH
Q 016434 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKL---------------PSGFNAWVSIFLFAL 185 (389)
Q Consensus 121 l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~---------------~~~~~~~~~~~~~g~ 185 (389)
|+++.++||+.....|++.++-.-.+.+.+-+.++.++...++...-... +-++......+.-|+
T Consensus 1 M~itmlcwGSW~nt~kL~~r~gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv 80 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAERRGRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV 80 (336)
T ss_pred CeeehhhhcChHHHHHHHHhcCCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence 35678999999999998887655445577777777766655443331111 112333344444444
Q ss_pred HHHHHHHHHHHHHhhcCChhHHHHH-HhhHHHHHHHHHHHHcCCCCcHH
Q 016434 186 VDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLV 233 (389)
Q Consensus 186 ~~~~~~~~~~~~al~~~~~~~a~~i-~~~~Pv~~~lla~l~l~Er~~~~ 233 (389)
+ ..+++++..+|+.....+.+-++ ..+.-++..++-+ |+..|.++.
T Consensus 81 v-fnlgNillq~aia~aGmSVafpvg~glalVlGv~~NY-fld~~~n~a 127 (336)
T PF07168_consen 81 V-FNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNY-FLDPKINRA 127 (336)
T ss_pred h-hhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeee-eccCCCCCc
Confidence 4 46677888999999998888777 4444444444544 456666543
No 125
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=46.09 E-value=24 Score=32.26 Aligned_cols=139 Identities=7% Similarity=0.006 Sum_probs=83.5
Q ss_pred hhhHHHHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHH-HHHHHHHHHHHH
Q 016434 112 LGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWV-SIFLFALVDASC 190 (389)
Q Consensus 112 ~~~~~g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~ 190 (389)
.+..+|-.++++.+-+++..++.-....++.+-.++.-.--++++++-.+-....++....-..++. ...+...++.++
T Consensus 162 snp~~GD~lvi~GATlYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w~~~i~~yl~f~L~MFl 241 (336)
T KOG2766|consen 162 SNPVKGDFLVIAGATLYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQFIFERHHVSTLHWDSAIFLYLRFALTMFL 241 (336)
T ss_pred CCCccCcEEEEecceeeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhhccceeeEeehHHHHHHHHHHHHHHH
Confidence 3445677888899999999999998888899988888888888888777765555543322112121 122222222222
Q ss_pred HHHHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccC
Q 016434 191 FQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA 252 (389)
Q Consensus 191 ~~~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~ 252 (389)
.|.+.-.-++..++....+-.-+.-++..++ ..++-++.|.-.++......|.++-...+
T Consensus 242 lYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re 301 (336)
T KOG2766|consen 242 LYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTRE 301 (336)
T ss_pred HHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccc
Confidence 2222222233333333222233344455444 45566799999999999888877765433
No 126
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=43.21 E-value=2.1e+02 Score=24.94 Aligned_cols=86 Identities=8% Similarity=-0.049 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHHHHHHh--CCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 016434 117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQ--GRKLPSGFNAWVSIFLFALVDASCFQGF 194 (389)
Q Consensus 117 g~l~l~~a~~~~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 194 (389)
+.+++-+-+++-|....+.+- ....+-......-.+.++...+.+.+.. +.+...+ ..+++.++..... ..-+++
T Consensus 101 sLl~lg~~aLlsgitaff~~n-A~~~GlItlll~a~vgGfamy~my~y~yr~~ad~sqr-~~~~K~~lv~~~s-m~lWi~ 177 (226)
T COG4858 101 SLLFLGAMALLSGITAFFQKN-AQVYGLITLLLTAVVGGFAMYIMYYYAYRMRADNSQR-PGTWKYLLVAVLS-MLLWIA 177 (226)
T ss_pred cHHHHHHHHHHHHHHHHHhcC-CcchhHHHHHHHHHhhhHHHHHHHHHHHHhhcccccC-CchHHHHHHHHHH-HHHHHH
Confidence 345566667788888888875 2234545555554444444443332222 2211121 2233333333333 333345
Q ss_pred HHHHhhcCChh
Q 016434 195 LAQGLQRTSAG 205 (389)
Q Consensus 195 ~~~al~~~~~~ 205 (389)
.+.+-..+|.+
T Consensus 178 v~i~t~~lPts 188 (226)
T COG4858 178 VMIATVFLPTS 188 (226)
T ss_pred HHHHHhhCCCc
Confidence 45555556554
No 127
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=42.27 E-value=3.8e+02 Score=27.04 Aligned_cols=45 Identities=7% Similarity=-0.119 Sum_probs=29.2
Q ss_pred HHHhhhhhHHHHHHHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHhhc
Q 016434 341 KLSSLTFLTPMFASIFGFLYLGE-----TFSPLQLVGAAVTVVAIYLVNF 385 (389)
Q Consensus 341 ~~s~~~~~~pv~a~i~~~~~~ge-----~~~~~~~~G~~lIi~g~~l~~~ 385 (389)
...++..+.-+.=+++..+=-.+ .++..|++...++++|++++.+
T Consensus 225 lf~lYli~Ygi~RF~iEflR~d~~~~~~gl~~~Q~lSl~~il~gl~~~~~ 274 (460)
T PRK13108 225 LFGFYVAFYCAGRFCVELLRDDPATLIAGIRINSFTSTFVFIGAVVYIIL 274 (460)
T ss_pred HHHHHHHHHHHHHHHhhhhccCchhhhcCccHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555555432111 2788999999999999887764
No 128
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=35.47 E-value=53 Score=30.88 Aligned_cols=30 Identities=7% Similarity=-0.050 Sum_probs=23.3
Q ss_pred chhhHHHHHHHHHHHHHHHhHHHHHHHhcc
Q 016434 111 ELGMLLEWAVLVSPFFFWGTAMVAMKEVLP 140 (389)
Q Consensus 111 ~~~~~~g~l~l~~a~~~~~~~~~~~k~~~~ 140 (389)
.++...|+...+++.++++...+.-.++..
T Consensus 214 g~~~~~Gl~i~~faG~c~slFSPafNlAtN 243 (336)
T PF07168_consen 214 GSSTLIGLGIAFFAGLCFSLFSPAFNLATN 243 (336)
T ss_pred cccceeeehHHHHHhHHHHhcCchhhcccc
Confidence 355677999999999999998877665543
No 129
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=34.50 E-value=1.1e+02 Score=29.46 Aligned_cols=17 Identities=24% Similarity=0.063 Sum_probs=8.9
Q ss_pred hhHHHHHHHHHHHHHHH
Q 016434 263 SGEWWMLLAAQSMAVGT 279 (389)
Q Consensus 263 ~G~~~~l~aa~~~a~~~ 279 (389)
.|..+++++.+...++.
T Consensus 166 sG~v~GilaSLl~Vifl 182 (452)
T KOG3817|consen 166 SGIVIGILASLLVVIFL 182 (452)
T ss_pred cccHHHHHHHHHHHHHH
Confidence 35555555555554444
No 130
>PF11139 DUF2910: Protein of unknown function (DUF2910); InterPro: IPR021315 Some members in this bacterial family annotate the proteins as cytochrome C biogenesis proteins however this cannot be confirmed. Currently no function for this family is known.
Probab=34.34 E-value=3.2e+02 Score=24.00 Aligned_cols=40 Identities=30% Similarity=0.310 Sum_probs=29.4
Q ss_pred HhhHHHHHHHHHHHHcCCCC-------------cHHHHHHHHHHHHHhHHhhc
Q 016434 211 IDSQPLSVAVLAALLFGESI-------------GLVGAGGLVLGVIGLLLLEA 250 (389)
Q Consensus 211 ~~~~Pv~~~lla~l~l~Er~-------------~~~~~~g~~l~~~Gv~ll~~ 250 (389)
.+..|+...++.+.+.+||. +.++..+.++.++|+.++..
T Consensus 159 i~~~~~~~pll~~~~~~~r~~~~l~r~~~wl~~~~~~i~~~i~~i~G~~l~~~ 211 (214)
T PF11139_consen 159 IASLPALLPLLAYLVAPERAEPWLERLRSWLRRHSRQILAVILLIVGALLLGD 211 (214)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHh
Confidence 45678888888888888776 34557778888888877653
No 131
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=31.40 E-value=75 Score=26.35 Aligned_cols=48 Identities=19% Similarity=0.199 Sum_probs=30.3
Q ss_pred HhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhH
Q 016434 198 GLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLL 246 (389)
Q Consensus 198 al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ 246 (389)
++.--+.-.++++.++.|++..+++.++ -+++...+.+.++.++.|.+
T Consensus 68 Gi~EkslL~sA~LvYi~PL~~l~v~~~L-a~~L~~~e~~~~~~~~lg~~ 115 (150)
T COG3086 68 GIEEKSLLKSALLVYIFPLVGLFLGAIL-AQYLFFSELIVIFGAFLGLA 115 (150)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhhHHHHHHHHHHHH
Confidence 3444456677888888999988887644 44555555555555555443
No 132
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=30.52 E-value=1.3e+02 Score=26.40 Aligned_cols=18 Identities=11% Similarity=-0.040 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHhHHHH
Q 016434 117 EWAVLVSPFFFWGTAMVA 134 (389)
Q Consensus 117 g~l~l~~a~~~~~~~~~~ 134 (389)
|+..+++.++..|.....
T Consensus 112 gi~tli~~~i~~G~~~~~ 129 (206)
T PF06570_consen 112 GIITLILVSIVGGLVFYF 129 (206)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 566666666666665543
No 133
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=30.37 E-value=65 Score=26.20 Aligned_cols=45 Identities=22% Similarity=0.315 Sum_probs=28.6
Q ss_pred CChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHH
Q 016434 202 TSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLL 247 (389)
Q Consensus 202 ~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~l 247 (389)
.....++++.+..|++..+++. +++..+...++.+++.+++|.++
T Consensus 65 ~~~~~aa~l~Y~lPll~li~g~-~l~~~~~~~e~~~~l~~l~~l~~ 109 (135)
T PF04246_consen 65 SSLLKAAFLVYLLPLLALIAGA-VLGSYLGGSELWAILGGLLGLAL 109 (135)
T ss_pred chHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455677788888888887764 44455554466666666655544
No 134
>COG5373 Predicted membrane protein [Function unknown]
Probab=30.30 E-value=7.4e+02 Score=26.92 Aligned_cols=28 Identities=14% Similarity=-0.002 Sum_probs=21.4
Q ss_pred HHHhhcCChhHHHHHHhhHHHHHHHHHH
Q 016434 196 AQGLQRTSAGLGSVIIDSQPLSVAVLAA 223 (389)
Q Consensus 196 ~~al~~~~~~~a~~i~~~~Pv~~~lla~ 223 (389)
+.=+.+.+++.+-.+..+.-+.++.++.
T Consensus 218 ~~iyd~i~pgaAf~LL~lIs~~t~~LAl 245 (931)
T COG5373 218 YGIYDLIGPGAAFALLVLISLATIGLAL 245 (931)
T ss_pred hcccccCChhHHHHHHHHHHHHHHHHHH
Confidence 3445668888888888888888888873
No 135
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=29.98 E-value=4.3e+02 Score=24.11 Aligned_cols=38 Identities=16% Similarity=-0.019 Sum_probs=19.6
Q ss_pred ccCChhHHHhhhhhHHHHHHHHHHHHhCCCCCHHHHHH
Q 016434 335 TKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVG 372 (389)
Q Consensus 335 ~~~~a~~~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G 372 (389)
++.++......+.++=.+=++-..+++.-.-++..-.+
T Consensus 117 ~~gp~~~~rs~~~v~W~Lqligl~lI~~ss~~~~~a~~ 154 (249)
T PF10225_consen 117 RYGPPVDPRSRNFVKWALQLIGLVLIYFSSQDPEFAFA 154 (249)
T ss_pred ccCCCccHhHHHHHHHHHHHHHHHHHHHHcCcHHHHHH
Confidence 45566555555555555555555555544444433333
No 136
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.83 E-value=2.6e+02 Score=21.54 Aligned_cols=32 Identities=6% Similarity=0.021 Sum_probs=28.0
Q ss_pred HHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhc
Q 016434 219 AVLAALLFGESIGLVGAGGLVLGVIGLLLLEA 250 (389)
Q Consensus 219 ~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~ 250 (389)
+.++.+.++|++++..+.|.++..+|+.++.+
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 35678899999999999999999999988764
No 137
>PF07331 TctB: Tripartite tricarboxylate transporter TctB family; InterPro: IPR009936 This entry contains bacterial proteins of around 150 residues in length, which have 4 transmembrane domains. Some of the sequences in the entry are annotated as the TctB subunit of the tripartite tricarboxylate transport(TTT) family. However there is no direct evidence to support this annotation as characterised members of this family are not associated with the entry.
Probab=29.58 E-value=3e+02 Score=22.12 Aligned_cols=30 Identities=20% Similarity=0.136 Sum_probs=14.2
Q ss_pred HHHHHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCC
Q 016434 193 GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGES 229 (389)
Q Consensus 193 ~~~~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er 229 (389)
..|...+++++--.++ .++..+. ..+++||
T Consensus 83 ~~y~~~~~~lGf~~at------~~~~~~~-~~~~g~r 112 (141)
T PF07331_consen 83 VLYVLLLEYLGFIIAT------FLFLFAF-MLLLGER 112 (141)
T ss_pred HHHHHHHHHhhHHHHH------HHHHHHH-HHHhCCC
Confidence 3445566555543333 2333333 3455666
No 138
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=27.15 E-value=81 Score=26.50 Aligned_cols=23 Identities=22% Similarity=0.173 Sum_probs=14.2
Q ss_pred cCChhHHHHHHhhHHHHHHHHHH
Q 016434 201 RTSAGLGSVIIDSQPLSVAVLAA 223 (389)
Q Consensus 201 ~~~~~~a~~i~~~~Pv~~~lla~ 223 (389)
.-....++++.|..|++..+++.
T Consensus 71 e~~llkaa~lvYllPLl~li~ga 93 (154)
T PRK10862 71 EGSLLRSALLVYMTPLVGLFLGA 93 (154)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHH
Confidence 33444566667777777766654
No 139
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=27.05 E-value=3.8e+02 Score=22.50 Aligned_cols=87 Identities=10% Similarity=-0.047 Sum_probs=47.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHhC-------CCC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCChh----
Q 016434 142 AGTFFVAAFRLIPAGLLLITFASSQG-------RKL-----PSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAG---- 205 (389)
Q Consensus 142 ~~p~~~~~~R~~~~~l~~~~~~~~~~-------~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~---- 205 (389)
+.|.++.+..++.-.+..+.+..-.. ++. -.+++.+...+..|..........|++....-+..
T Consensus 4 l~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~~~~ 83 (182)
T PF00689_consen 4 LTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDEETN 83 (182)
T ss_dssp S-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSSHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhccccccccc
Confidence 45778888877776665555443211 111 12445667777777777677766666666532211
Q ss_pred -----HHHHHHhhHHHHHHHHHHHHcCC
Q 016434 206 -----LGSVIIDSQPLSVAVLAALLFGE 228 (389)
Q Consensus 206 -----~a~~i~~~~Pv~~~lla~l~l~E 228 (389)
.+....++.-++.-++-.+..+.
T Consensus 84 ~~~~~~a~T~~F~~lv~~q~~~~~~~r~ 111 (182)
T PF00689_consen 84 NDNLAQAQTMAFTALVLSQLFNAFNCRS 111 (182)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTSS
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 25555555555555554444443
No 140
>COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) [Signal transduction mechanisms]
Probab=26.12 E-value=4.1e+02 Score=22.55 Aligned_cols=60 Identities=13% Similarity=0.184 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhccCChhHHHhhhhhHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHh
Q 016434 324 AISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGE-TFSPLQLVGAAVTVVAIYLV 383 (389)
Q Consensus 324 ~l~~~l~~~al~~~~a~~~s~~~~~~pv~a~i~~~~~~ge-~~~~~~~~G~~lIi~g~~l~ 383 (389)
.-++..|.+.-....+-....+..++-+....++.+++++ .+....+.+..+-++..++.
T Consensus 62 iSa~lvW~~~~~~~~~~~~~~ly~~ql~ln~awspiff~l~~l~~a~i~~lll~~~vl~l~ 122 (161)
T COG3476 62 ISAYLVWEKGPGQGTSWLLMFLYLLQLILNFAWSPIFFGLRSLGAALIIILLLWIAVLVLT 122 (161)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHH
Confidence 3356665555444445555555669999999999999998 67777777766655554443
No 141
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.
Probab=22.29 E-value=7.8e+02 Score=24.48 Aligned_cols=120 Identities=22% Similarity=0.116 Sum_probs=65.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHhhHHHHHHHH
Q 016434 142 AGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVL 221 (389)
Q Consensus 142 ~~p~~~~~~R~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pv~~~ll 221 (389)
-+|..+..++.++-++..+++.+..++..... +..+..++ .+ +.+.++......+-+......|++...+
T Consensus 57 Ps~~tLli~Qal~la~~~~pl~~lar~~~~~~----~~a~~~~~-----~y-lL~p~~~~~~~~dFH~~~~avPll~~~~ 126 (449)
T PF09852_consen 57 PSPLTLLIVQALLLALGAIPLYRLARRRLLSR----RLALLIAL-----AY-LLSPGLQGANLFDFHPVAFAVPLLLWAL 126 (449)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc----HHHHHHHH-----HH-HHhHHHHhhhhCCCcHHHHHHHHHHHHH
Confidence 34788888888888887777765554332111 11122222 22 2245555555566677777778777666
Q ss_pred HHHHcCCCCcH-----------HHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHH
Q 016434 222 AALLFGESIGL-----------VGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGT 279 (389)
Q Consensus 222 a~l~l~Er~~~-----------~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~ 279 (389)
- .+.++|... ++-.++.++..|+.++.... ....|..+.+.+...+.+..
T Consensus 127 ~-~~~~~r~~~~~~~~ll~llvKEd~~l~v~~~gl~~~~~~r-------~~r~g~~~~~~~~~~~~l~~ 187 (449)
T PF09852_consen 127 Y-ALERRRWRLFILWALLLLLVKEDLGLTVAGIGLYLLLRRR-------KRRWGLALAVFGVAWFILAT 187 (449)
T ss_pred H-HHHhCcHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCc-------cchHHHHHHHHHHHHHHHHH
Confidence 4 455555432 33345666667777777631 12235555555555444433
No 142
>PF02419 PsbL: PsbL protein; InterPro: IPR003372 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbL found in PSII. PsbL is located in a gene cluster with PsbE, PsbF and PsbJ (PsbEFJL). Both PsbL and PsbJ (IPR002682 from INTERPRO) are essential for proper assembly of the OEC. Mutations in PsbL prevent the formation of both PSII core dimers and PSII-light harvesting complex []. In addition, both PsbL and PsbJ are involved in the unidirectional flow of electrons, where PsbJ regulates the forward electron flow from D2 (Qa) to the plastoquinone pool, and PsbL prevents the reduction of PSII by back electron flow from plastoquinol protecting PSII from photo-inactivation [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3A0H_L 3A0B_l 3ARC_l 1S5L_l 2AXT_l 3BZ2_L 4FBY_L 3PRQ_L 3PRR_L 3KZI_L ....
Probab=22.06 E-value=2e+02 Score=17.66 Aligned_cols=25 Identities=0% Similarity=0.086 Sum_probs=17.3
Q ss_pred cccchhhHHHHHHHHHHHHHHHhHH
Q 016434 108 QVMELGMLLEWAVLVSPFFFWGTAM 132 (389)
Q Consensus 108 ~~~~~~~~~g~l~l~~a~~~~~~~~ 132 (389)
+..+..-.+|.++.+..+++++.++
T Consensus 11 ELNRTSLY~GLllifvl~vLFssyf 35 (37)
T PF02419_consen 11 ELNRTSLYWGLLLIFVLAVLFSSYF 35 (37)
T ss_dssp E--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHhHHHHHHHHHHHHHHhhhhh
Confidence 3455666788888888888887665
No 143
>PRK11715 inner membrane protein; Provisional
Probab=21.92 E-value=8.1e+02 Score=24.51 Aligned_cols=20 Identities=10% Similarity=-0.097 Sum_probs=10.7
Q ss_pred cCcCHHHHHHHHHHHHHHHH
Q 016434 140 PKAGTFFVAAFRLIPAGLLL 159 (389)
Q Consensus 140 ~~~~p~~~~~~R~~~~~l~~ 159 (389)
..++|.+-..+-...+...+
T Consensus 327 ~~iHpiQYlLVGlAl~lFYL 346 (436)
T PRK11715 327 LRIHPVQYLLVGLALVLFYL 346 (436)
T ss_pred ceecHHHHHHHHHHHHHHHH
Confidence 34677776665544443333
No 144
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=21.30 E-value=1.4e+02 Score=17.43 Aligned_cols=22 Identities=27% Similarity=0.209 Sum_probs=11.9
Q ss_pred CHHHHHHHHHHHHHHHHhhccC
Q 016434 366 SPLQLVGAAVTVVAIYLVNFRG 387 (389)
Q Consensus 366 ~~~~~~G~~lIi~g~~l~~~~~ 387 (389)
....++|.+++..+.++..+++
T Consensus 11 ~~~~~~G~~l~~~~~~~~~~rk 32 (34)
T TIGR01167 11 SLLLLLGLLLLGLGGLLLRKRK 32 (34)
T ss_pred HHHHHHHHHHHHHHHHHheecc
Confidence 3556677755555554444444
No 145
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.98 E-value=5.3e+02 Score=24.99 Aligned_cols=81 Identities=11% Similarity=0.157 Sum_probs=41.1
Q ss_pred HHhHHHHHHHhccCcCHHHHHHHHHHHHHHHHHH-----HHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 016434 128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLIT-----FASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRT 202 (389)
Q Consensus 128 ~~~~~~~~k~~~~~~~p~~~~~~R~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~ 202 (389)
|+......|.+.+++....+....++++-++... +|+..+.+......+...+. +-++ +-.+.|.+.++.
T Consensus 201 Ws~slY~i~ql~~nLq~Iwieyr~yvLgYvlivgliSfaVCYK~GPp~d~RS~~ilmWt-Lqli----~lvl~Yfsvq~p 275 (452)
T KOG3817|consen 201 WSISLYVIKQLADNLQLIWIEYRDYVLGYVLIVGLISFAVCYKIGPPKDPRSQTILMWT-LQLI----GLVLAYFSVQHP 275 (452)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcchhhHHHHH-HHHH----HHHHHHHhcccH
Confidence 5566666666666666666666666666444322 33322222212212222222 1222 223557788888
Q ss_pred ChhHHHHHHhh
Q 016434 203 SAGLGSVIIDS 213 (389)
Q Consensus 203 ~~~~a~~i~~~ 213 (389)
.++.|.+|..+
T Consensus 276 ~~a~A~iI~~l 286 (452)
T KOG3817|consen 276 SAAIAAIIMVL 286 (452)
T ss_pred HHHHHHHHHHH
Confidence 88887666543
No 146
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=20.67 E-value=1.1e+03 Score=25.54 Aligned_cols=157 Identities=15% Similarity=0.221 Sum_probs=0.0
Q ss_pred hhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHH----
Q 016434 204 AGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGT---- 279 (389)
Q Consensus 204 ~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~---- 279 (389)
.+++.++.-+.|+-.+.++.+.+.+|.+...+.+.+-.++|.+-+...+ +....+...+......
T Consensus 10 lgRa~il~~l~PFg~af~~a~~~~~~~~~~~~~~~~~~~~G~~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 78 (764)
T TIGR02865 10 LGRAVIVSPMAPFGIAFLAAVLLAKKGGDKAFFSALGVLLGAISIQPKH-----------SLKYLLLVAVIILLSYVLKN 78 (764)
T ss_pred HhHHHHhcCCCchHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhCccc-----------hHHHHHHHHHHHHHHHHhhh
Q ss_pred ------------HHHHHHHHHHHHHHhhcCcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhH------
Q 016434 280 ------------HMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTK------ 341 (389)
Q Consensus 280 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~~l~~~al~~~~a~~------ 341 (389)
..+.....-.....+... ..++-.+...+.=++++..+.|.+ .+++....-..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~y~~~~~~~e~~l~~~l~~if-~~~~~~~~~~~~~~~~~ 149 (764)
T TIGR02865 79 LTDKKKTVVPPIVVFLEAAVYAIFGYLQNK--------LVTPLDFILSIVEASLSFVLYYIF-NYSIPCLKNGRTKHLLT 149 (764)
T ss_pred hhcccchhhhhhhhhHHHHHHHHHHHhhCC--------cccHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcccccCCCc
Q ss_pred ----HHhhhhhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Q 016434 342 ----LSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYL 382 (389)
Q Consensus 342 ----~s~~~~~~pv~a~i~~~~~~ge~~~~~~~~G~~lIi~g~~l 382 (389)
++++..+..+++-+.++-+++ ++...+++..+|+...+.
T Consensus 150 ~eei~s~~il~~~~l~G~~~~~i~~--~sl~~il~~~~vl~~a~~ 192 (764)
T TIGR02865 150 NEEIVSLIILIASVLTGLRGLSIWG--LSLENIIARLAVLLISYI 192 (764)
T ss_pred HhHHHHHHHHHHHHHHccCCCEEEe--eEHHHHHHHHHHHHHHHh
No 147
>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion. The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].
Probab=20.48 E-value=1.1e+02 Score=26.50 Aligned_cols=14 Identities=29% Similarity=0.328 Sum_probs=5.9
Q ss_pred HHHHHHHHHhHHhh
Q 016434 236 GGLVLGVIGLLLLE 249 (389)
Q Consensus 236 ~g~~l~~~Gv~ll~ 249 (389)
+|+++..+|++.+.
T Consensus 14 lgilli~~gI~~Lv 27 (191)
T PF04156_consen 14 LGILLIASGIAALV 27 (191)
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444444433
No 148
>PF05884 ZYG-11_interact: Interactor of ZYG-11; InterPro: IPR008574 This family consists of proteins of unknown function found in Caenorhabditis species.
Probab=20.16 E-value=7.3e+02 Score=23.33 Aligned_cols=43 Identities=19% Similarity=0.263 Sum_probs=30.6
Q ss_pred HHHhhcCChhHHHHHHhhHHHHHHHHHHHHcCCCCcHHHHHHHH
Q 016434 196 AQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLV 239 (389)
Q Consensus 196 ~~al~~~~~~~a~~i~~~~Pv~~~lla~l~l~Er~~~~~~~g~~ 239 (389)
=.+++|.... ...+..++|+++.+.-.+..+..-++.+.++..
T Consensus 182 Ga~ls~~~l~-sePf~~LT~iv~sfi~~~i~~~~~~R~~lLg~~ 224 (299)
T PF05884_consen 182 GAGLSHLYLS-SEPFIALTPIVSSFIYPLIAGHGTNRQKLLGIV 224 (299)
T ss_pred HHHhhccccc-CCcHHHHHHHHHHHHHHHHccCCcchHHHHHHH
Confidence 3566666665 488999999999888777876655666666543
Done!