Query 016441
Match_columns 389
No_of_seqs 150 out of 286
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 13:38:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016441.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016441hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eey_A Putative rRNA methylase 97.8 0.00015 5.1E-09 62.4 11.1 156 22-190 21-182 (197)
2 3cgg_A SAM-dependent methyltra 97.7 0.00033 1.1E-08 58.8 11.8 129 22-179 45-173 (195)
3 3mti_A RRNA methylase; SAM-dep 97.7 0.00016 5.4E-09 61.6 9.9 120 22-158 21-140 (185)
4 1yzh_A TRNA (guanine-N(7)-)-me 97.7 0.00024 8.3E-09 62.5 11.2 148 15-179 32-180 (214)
5 1ixk_A Methyltransferase; open 97.6 0.00063 2.2E-08 64.8 13.5 145 22-177 117-271 (315)
6 3dh0_A SAM dependent methyltra 97.6 0.00076 2.6E-08 58.6 12.7 138 21-182 35-182 (219)
7 3evz_A Methyltransferase; NYSG 97.6 0.00091 3.1E-08 58.8 12.4 144 21-178 53-203 (230)
8 3kkz_A Uncharacterized protein 97.5 0.002 6.7E-08 58.3 14.2 147 18-190 41-206 (267)
9 3f4k_A Putative methyltransfer 97.5 0.0019 6.4E-08 57.5 13.5 143 18-186 41-201 (257)
10 1g8a_A Fibrillarin-like PRE-rR 97.4 0.00097 3.3E-08 58.8 10.8 135 21-182 71-213 (227)
11 3lpm_A Putative methyltransfer 97.4 0.0011 3.8E-08 60.3 11.0 147 23-181 49-201 (259)
12 2fca_A TRNA (guanine-N(7)-)-me 97.4 0.00063 2.2E-08 60.6 9.2 148 14-178 28-176 (213)
13 2qm3_A Predicted methyltransfe 97.4 0.0029 1E-07 61.4 14.5 130 23-179 172-307 (373)
14 1kpg_A CFA synthase;, cyclopro 97.4 0.0029 1E-07 57.6 13.6 129 22-182 63-229 (287)
15 3e23_A Uncharacterized protein 97.3 0.00061 2.1E-08 59.2 8.4 139 16-186 36-187 (211)
16 3hem_A Cyclopropane-fatty-acyl 97.3 0.0035 1.2E-07 57.9 14.1 141 22-183 71-245 (302)
17 2kw5_A SLR1183 protein; struct 97.3 0.0019 6.6E-08 55.5 10.9 138 16-184 23-174 (202)
18 3bwc_A Spermidine synthase; SA 97.3 0.00049 1.7E-08 65.3 7.5 144 22-187 94-246 (304)
19 2pwy_A TRNA (adenine-N(1)-)-me 97.3 0.002 6.9E-08 57.3 11.0 130 21-181 94-224 (258)
20 2b3t_A Protein methyltransfera 97.3 0.0014 4.7E-08 60.3 10.1 140 22-177 108-259 (276)
21 2frn_A Hypothetical protein PH 97.2 0.00082 2.8E-08 62.6 8.6 127 21-177 123-253 (278)
22 1ej0_A FTSJ; methyltransferase 97.2 0.00053 1.8E-08 56.1 6.4 120 18-157 17-140 (180)
23 3l8d_A Methyltransferase; stru 97.2 0.0047 1.6E-07 54.2 12.8 132 21-182 51-201 (242)
24 2yxl_A PH0851 protein, 450AA l 97.2 0.0027 9.3E-08 63.4 12.6 148 21-177 257-415 (450)
25 1ve3_A Hypothetical protein PH 97.2 0.0055 1.9E-07 53.1 12.5 108 20-155 35-144 (227)
26 4dmg_A Putative uncharacterize 97.2 0.0019 6.4E-08 64.2 10.7 143 15-175 205-351 (393)
27 3h2b_A SAM-dependent methyltra 97.1 0.0051 1.7E-07 52.9 11.9 128 24-183 42-184 (203)
28 3vc1_A Geranyl diphosphate 2-C 97.1 0.0048 1.7E-07 57.5 12.7 147 16-190 110-278 (312)
29 3bus_A REBM, methyltransferase 97.1 0.014 4.9E-07 52.4 15.2 140 22-187 60-222 (273)
30 3k6r_A Putative transferase PH 97.0 0.0018 6E-08 61.9 8.9 127 20-176 122-252 (278)
31 4df3_A Fibrillarin-like rRNA/T 97.0 0.0042 1.4E-07 58.1 11.3 139 20-183 74-219 (233)
32 1yb2_A Hypothetical protein TA 97.0 0.0016 5.4E-08 59.9 8.3 129 21-181 108-237 (275)
33 1fbn_A MJ fibrillarin homologu 97.0 0.0045 1.5E-07 55.2 11.0 136 21-183 72-215 (230)
34 3e8s_A Putative SAM dependent 97.0 0.0047 1.6E-07 53.1 10.6 128 23-180 52-208 (227)
35 2o57_A Putative sarcosine dime 97.0 0.0085 2.9E-07 54.8 12.8 135 20-182 79-235 (297)
36 3ajd_A Putative methyltransfer 97.0 0.00089 3E-08 62.1 6.1 149 22-177 82-237 (274)
37 3dli_A Methyltransferase; PSI- 97.0 0.0073 2.5E-07 53.6 11.9 135 16-183 34-186 (240)
38 3sm3_A SAM-dependent methyltra 97.0 0.0068 2.3E-07 52.5 11.4 135 21-181 28-207 (235)
39 2fk8_A Methoxy mycolic acid sy 97.0 0.0033 1.1E-07 58.3 9.9 130 22-182 89-255 (318)
40 2vdv_E TRNA (guanine-N(7)-)-me 97.0 0.00089 3E-08 60.5 5.9 143 15-173 30-192 (246)
41 1xxl_A YCGJ protein; structura 97.0 0.0075 2.6E-07 53.8 11.8 134 21-181 19-174 (239)
42 1wxx_A TT1595, hypothetical pr 97.0 0.0028 9.6E-08 61.7 9.6 157 15-187 202-363 (382)
43 1o54_A SAM-dependent O-methylt 97.0 0.0037 1.3E-07 57.3 9.9 128 22-181 111-239 (277)
44 3mb5_A SAM-dependent methyltra 96.9 0.004 1.4E-07 55.7 9.2 133 21-184 91-225 (255)
45 3ujc_A Phosphoethanolamine N-m 96.8 0.019 6.4E-07 50.8 13.2 135 21-183 53-208 (266)
46 3grz_A L11 mtase, ribosomal pr 96.8 0.005 1.7E-07 53.3 9.2 126 22-180 59-184 (205)
47 3cc8_A Putative methyltransfer 96.8 0.027 9.1E-07 48.5 13.7 130 22-183 31-187 (230)
48 2ipx_A RRNA 2'-O-methyltransfe 96.8 0.0063 2.2E-07 54.1 10.0 136 21-183 75-219 (233)
49 2p7i_A Hypothetical protein; p 96.8 0.0039 1.3E-07 54.3 8.4 135 16-182 35-200 (250)
50 3g5l_A Putative S-adenosylmeth 96.8 0.0082 2.8E-07 53.5 10.3 132 23-183 44-218 (253)
51 1vl5_A Unknown conserved prote 96.8 0.0074 2.5E-07 54.1 10.0 133 22-181 36-190 (260)
52 3ocj_A Putative exported prote 96.8 0.004 1.4E-07 57.8 8.6 137 21-181 116-291 (305)
53 1ri5_A MRNA capping enzyme; me 96.7 0.0093 3.2E-07 53.9 10.7 137 22-182 63-251 (298)
54 1y8c_A S-adenosylmethionine-de 96.7 0.0087 3E-07 52.2 9.8 104 23-154 37-143 (246)
55 1sqg_A SUN protein, FMU protei 96.7 0.0074 2.5E-07 59.7 10.4 145 22-177 245-400 (429)
56 4dzr_A Protein-(glutamine-N5) 96.7 0.0016 5.5E-08 55.6 4.9 145 22-177 29-188 (215)
57 3mgg_A Methyltransferase; NYSG 96.7 0.014 4.8E-07 52.6 11.3 137 20-181 34-198 (276)
58 3m4x_A NOL1/NOP2/SUN family pr 96.6 0.0061 2.1E-07 62.0 9.3 147 22-178 104-260 (456)
59 3bkx_A SAM-dependent methyltra 96.6 0.037 1.3E-06 49.7 13.5 141 21-181 41-219 (275)
60 1vlm_A SAM-dependent methyltra 96.6 0.0075 2.6E-07 52.9 8.7 135 17-191 41-196 (219)
61 2igt_A SAM dependent methyltra 96.6 0.0021 7.1E-08 62.2 5.4 141 23-176 153-299 (332)
62 3dmg_A Probable ribosomal RNA 96.6 0.0027 9.4E-08 62.6 6.3 137 23-183 233-375 (381)
63 1nkv_A Hypothetical protein YJ 96.6 0.012 4.1E-07 52.2 9.9 137 21-184 34-190 (256)
64 1dus_A MJ0882; hypothetical pr 96.6 0.021 7.1E-07 47.7 10.8 108 22-156 51-160 (194)
65 3dlc_A Putative S-adenosyl-L-m 96.5 0.0076 2.6E-07 51.5 8.2 129 26-179 46-201 (219)
66 1i9g_A Hypothetical protein RV 96.5 0.012 4.1E-07 53.3 9.9 128 21-179 97-228 (280)
67 3ckk_A TRNA (guanine-N(7)-)-me 96.5 0.0031 1.1E-07 57.6 5.9 137 24-176 47-190 (235)
68 2as0_A Hypothetical protein PH 96.5 0.0064 2.2E-07 59.2 8.3 148 16-176 209-361 (396)
69 3g2m_A PCZA361.24; SAM-depende 96.5 0.013 4.3E-07 54.0 9.8 135 24-183 83-276 (299)
70 3ou2_A SAM-dependent methyltra 96.5 0.063 2.1E-06 46.0 13.6 108 16-155 39-148 (218)
71 2b78_A Hypothetical protein SM 96.5 0.0048 1.6E-07 60.5 7.3 159 15-187 203-367 (385)
72 3dtn_A Putative methyltransfer 96.5 0.046 1.6E-06 47.9 12.9 113 16-154 37-149 (234)
73 3g89_A Ribosomal RNA small sub 96.5 0.011 3.7E-07 54.5 9.2 135 22-182 79-213 (249)
74 2fhp_A Methylase, putative; al 96.5 0.0047 1.6E-07 52.0 6.2 123 17-160 38-161 (187)
75 1i1n_A Protein-L-isoaspartate 96.4 0.0083 2.8E-07 52.6 7.7 108 21-158 75-187 (226)
76 4dcm_A Ribosomal RNA large sub 96.4 0.0042 1.4E-07 61.0 6.4 136 24-179 223-366 (375)
77 2zfu_A Nucleomethylin, cerebra 96.4 0.018 6.2E-07 50.0 9.7 116 17-178 61-176 (215)
78 3m6w_A RRNA methylase; rRNA me 96.4 0.011 3.7E-07 60.4 9.4 146 22-178 100-256 (464)
79 3dxy_A TRNA (guanine-N(7)-)-me 96.3 0.0068 2.3E-07 54.6 7.0 139 23-176 34-172 (218)
80 1xdz_A Methyltransferase GIDB; 96.3 0.013 4.4E-07 52.5 8.8 135 22-182 69-203 (240)
81 2pjd_A Ribosomal RNA small sub 96.3 0.0032 1.1E-07 60.2 4.9 132 23-178 196-334 (343)
82 3c0k_A UPF0064 protein YCCW; P 96.3 0.0031 1.1E-07 61.5 4.8 159 15-187 212-377 (396)
83 3id6_C Fibrillarin-like rRNA/T 96.3 0.098 3.4E-06 48.5 14.6 137 21-184 74-219 (232)
84 2r3s_A Uncharacterized protein 96.3 0.044 1.5E-06 50.8 12.4 135 22-181 164-323 (335)
85 4htf_A S-adenosylmethionine-de 96.3 0.014 4.9E-07 53.0 8.8 131 24-182 69-233 (285)
86 4fsd_A Arsenic methyltransfera 96.2 0.039 1.3E-06 53.4 12.2 139 22-180 82-250 (383)
87 2frx_A Hypothetical protein YE 96.2 0.03 1E-06 57.1 11.7 140 23-172 117-266 (479)
88 3d2l_A SAM-dependent methyltra 96.2 0.026 8.8E-07 49.4 9.7 105 20-153 30-137 (243)
89 3hnr_A Probable methyltransfer 96.2 0.045 1.5E-06 47.3 11.1 128 23-180 45-200 (220)
90 3bkw_A MLL3908 protein, S-aden 96.2 0.053 1.8E-06 47.4 11.7 133 22-183 42-216 (243)
91 3tma_A Methyltransferase; thum 96.2 0.07 2.4E-06 50.9 13.3 140 20-181 200-339 (354)
92 3i9f_A Putative type 11 methyl 96.2 0.047 1.6E-06 45.4 10.7 129 21-186 15-153 (170)
93 2ozv_A Hypothetical protein AT 96.1 0.011 3.7E-07 54.3 7.3 148 22-180 35-193 (260)
94 1xtp_A LMAJ004091AAA; SGPP, st 96.1 0.013 4.5E-07 51.7 7.5 134 22-181 92-238 (254)
95 1inl_A Spermidine synthase; be 96.1 0.0059 2E-07 57.7 5.5 112 23-154 90-206 (296)
96 2b25_A Hypothetical protein; s 96.1 0.028 9.5E-07 53.1 10.2 108 21-155 103-221 (336)
97 1jsx_A Glucose-inhibited divis 96.1 0.021 7.1E-07 49.1 8.4 125 23-182 65-189 (207)
98 2ex4_A Adrenal gland protein A 96.1 0.014 4.9E-07 51.8 7.5 133 23-181 79-225 (241)
99 1l3i_A Precorrin-6Y methyltran 96.0 0.013 4.4E-07 48.9 6.8 123 21-176 31-155 (192)
100 3lcc_A Putative methyl chlorid 96.0 0.053 1.8E-06 47.8 11.0 136 24-184 67-210 (235)
101 3e05_A Precorrin-6Y C5,15-meth 96.0 0.22 7.6E-06 42.9 14.6 123 21-173 38-160 (204)
102 3i53_A O-methyltransferase; CO 96.0 0.11 3.8E-06 48.6 13.7 135 22-182 168-322 (332)
103 3pfg_A N-methyltransferase; N, 96.0 0.038 1.3E-06 49.6 10.0 102 22-152 49-150 (263)
104 2p8j_A S-adenosylmethionine-de 96.0 0.031 1.1E-06 47.9 9.0 114 18-156 18-131 (209)
105 1qzz_A RDMB, aclacinomycin-10- 95.9 0.13 4.4E-06 48.7 14.0 136 21-182 180-340 (374)
106 3adn_A Spermidine synthase; am 95.9 0.021 7.3E-07 54.2 8.6 111 23-153 83-198 (294)
107 3hm2_A Precorrin-6Y C5,15-meth 95.9 0.032 1.1E-06 46.4 8.6 127 22-180 24-152 (178)
108 2pt6_A Spermidine synthase; tr 95.9 0.0056 1.9E-07 58.8 4.3 110 23-154 116-231 (321)
109 1nt2_A Fibrillarin-like PRE-rR 95.9 0.082 2.8E-06 47.1 11.5 135 21-183 55-197 (210)
110 2esr_A Methyltransferase; stru 95.8 0.024 8.1E-07 47.7 7.6 118 17-158 25-143 (177)
111 2b2c_A Spermidine synthase; be 95.8 0.0054 1.8E-07 59.0 3.9 109 23-153 108-222 (314)
112 3p9n_A Possible methyltransfer 95.8 0.042 1.4E-06 47.0 9.2 113 22-157 43-157 (189)
113 2i7c_A Spermidine synthase; tr 95.8 0.0048 1.6E-07 57.9 3.4 110 23-153 78-192 (283)
114 1uir_A Polyamine aminopropyltr 95.8 0.0091 3.1E-07 56.9 5.2 111 23-153 77-195 (314)
115 3a27_A TYW2, uncharacterized p 95.7 0.01 3.5E-07 55.1 5.3 129 18-176 114-246 (272)
116 2pxx_A Uncharacterized protein 95.7 0.015 5.2E-07 49.6 6.0 121 22-156 41-162 (215)
117 2nyu_A Putative ribosomal RNA 95.7 0.0099 3.4E-07 50.6 4.8 117 21-157 20-149 (196)
118 2ift_A Putative methylase HI07 95.7 0.032 1.1E-06 48.9 8.0 118 17-157 47-167 (201)
119 3bxo_A N,N-dimethyltransferase 95.6 0.11 3.6E-06 45.3 11.2 100 22-153 39-141 (239)
120 2b9e_A NOL1/NOP2/SUN domain fa 95.6 0.15 5.2E-06 48.8 13.1 147 22-177 101-261 (309)
121 3gwz_A MMCR; methyltransferase 95.6 0.18 6.3E-06 48.4 13.7 136 21-181 200-356 (369)
122 2nxc_A L11 mtase, ribosomal pr 95.6 0.045 1.5E-06 50.0 8.9 123 22-180 119-243 (254)
123 3gu3_A Methyltransferase; alph 95.5 0.18 6.1E-06 46.2 12.7 111 18-155 17-128 (284)
124 2xvm_A Tellurite resistance pr 95.5 0.046 1.6E-06 46.1 8.1 106 22-153 31-136 (199)
125 2gpy_A O-methyltransferase; st 95.5 0.029 9.8E-07 49.7 7.1 106 22-152 53-159 (233)
126 1x19_A CRTF-related protein; m 95.4 0.33 1.1E-05 46.0 14.6 136 21-182 188-349 (359)
127 1wzn_A SAM-dependent methyltra 95.4 0.055 1.9E-06 47.9 8.6 106 23-154 41-146 (252)
128 1tw3_A COMT, carminomycin 4-O- 95.4 0.18 6.2E-06 47.5 12.6 136 21-182 181-340 (360)
129 1mjf_A Spermidine synthase; sp 95.4 0.0081 2.8E-07 56.1 3.3 108 22-153 74-193 (281)
130 1iy9_A Spermidine synthase; ro 95.4 0.046 1.6E-06 51.0 8.4 126 23-171 75-209 (275)
131 2yvl_A TRMI protein, hypotheti 95.3 0.21 7.3E-06 43.8 12.1 123 22-178 90-212 (248)
132 3p2e_A 16S rRNA methylase; met 95.3 0.047 1.6E-06 49.3 7.9 145 23-184 24-188 (225)
133 2o07_A Spermidine synthase; st 95.3 0.023 7.9E-07 54.1 6.1 111 22-153 94-209 (304)
134 2fpo_A Methylase YHHF; structu 95.2 0.06 2E-06 47.2 8.2 111 23-158 54-165 (202)
135 3njr_A Precorrin-6Y methylase; 95.2 0.16 5.4E-06 44.8 10.9 124 22-180 54-179 (204)
136 1ws6_A Methyltransferase; stru 95.2 0.021 7.3E-07 47.0 5.0 111 23-157 41-151 (171)
137 2plw_A Ribosomal RNA methyltra 95.1 0.14 4.9E-06 43.6 10.0 127 21-170 20-169 (201)
138 3gjy_A Spermidine synthase; AP 95.1 0.0096 3.3E-07 58.1 2.9 114 25-157 91-204 (317)
139 2i62_A Nicotinamide N-methyltr 95.1 0.077 2.6E-06 46.9 8.5 149 22-182 55-240 (265)
140 3tfw_A Putative O-methyltransf 95.0 0.1 3.6E-06 47.2 9.5 108 20-152 60-169 (248)
141 3duw_A OMT, O-methyltransferas 95.0 0.049 1.7E-06 47.6 7.0 111 20-152 55-166 (223)
142 2yxd_A Probable cobalt-precorr 95.0 0.096 3.3E-06 43.3 8.4 121 22-178 34-154 (183)
143 1xj5_A Spermidine synthase 1; 95.0 0.024 8.2E-07 55.0 5.4 113 22-153 119-235 (334)
144 2pbf_A Protein-L-isoaspartate 95.0 0.024 8.2E-07 49.7 4.8 111 20-156 77-196 (227)
145 2ip2_A Probable phenazine-spec 94.9 0.31 1.1E-05 45.4 12.7 134 21-181 166-322 (334)
146 3ofk_A Nodulation protein S; N 94.9 0.028 9.5E-07 48.7 5.1 109 21-156 49-157 (216)
147 1wy7_A Hypothetical protein PH 94.9 0.079 2.7E-06 45.6 7.9 127 23-181 49-175 (207)
148 3ccf_A Cyclopropane-fatty-acyl 94.8 0.16 5.4E-06 46.1 10.0 101 22-155 56-156 (279)
149 3tr6_A O-methyltransferase; ce 94.7 0.038 1.3E-06 48.2 5.5 110 20-152 61-173 (225)
150 3g5t_A Trans-aconitate 3-methy 94.7 0.18 6.3E-06 46.2 10.2 110 22-151 35-147 (299)
151 3q7e_A Protein arginine N-meth 94.7 0.088 3E-06 50.6 8.3 106 22-150 65-170 (349)
152 4e2x_A TCAB9; kijanose, tetron 94.6 0.052 1.8E-06 52.5 6.7 127 22-181 106-253 (416)
153 2yxe_A Protein-L-isoaspartate 94.5 0.27 9.3E-06 42.4 10.4 106 21-156 75-180 (215)
154 3fpf_A Mtnas, putative unchara 94.4 0.51 1.7E-05 45.7 13.0 108 18-156 117-225 (298)
155 3mcz_A O-methyltransferase; ad 94.4 0.21 7.3E-06 46.9 10.1 133 24-178 180-336 (352)
156 4gek_A TRNA (CMO5U34)-methyltr 94.3 0.12 4.3E-06 47.8 8.3 109 22-154 69-179 (261)
157 2fyt_A Protein arginine N-meth 94.3 0.16 5.5E-06 48.7 9.2 105 21-150 62-168 (340)
158 2yx1_A Hypothetical protein MJ 94.3 0.15 5E-06 48.9 8.8 120 22-177 194-313 (336)
159 3bzb_A Uncharacterized protein 94.2 0.31 1.1E-05 45.1 10.7 137 22-180 78-236 (281)
160 2ih2_A Modification methylase 94.2 0.14 4.7E-06 49.2 8.5 132 22-173 38-186 (421)
161 3mq2_A 16S rRNA methyltransfer 94.2 0.12 4.2E-06 44.9 7.5 140 22-184 26-187 (218)
162 2avd_A Catechol-O-methyltransf 94.2 0.044 1.5E-06 48.0 4.7 111 19-152 65-178 (229)
163 1r18_A Protein-L-isoaspartate( 94.2 0.24 8.3E-06 43.6 9.5 107 20-156 81-197 (227)
164 2cmg_A Spermidine synthase; tr 94.1 0.047 1.6E-06 50.9 4.9 96 23-153 72-171 (262)
165 3o4f_A Spermidine synthase; am 94.0 0.14 4.7E-06 49.6 8.1 114 23-152 83-197 (294)
166 1dl5_A Protein-L-isoaspartate 94.0 0.23 7.8E-06 46.7 9.5 104 21-154 73-176 (317)
167 2gs9_A Hypothetical protein TT 94.0 0.22 7.5E-06 42.8 8.6 100 23-156 36-135 (211)
168 3m70_A Tellurite resistance pr 93.9 0.14 4.8E-06 46.5 7.6 103 23-153 120-223 (286)
169 3jwh_A HEN1; methyltransferase 93.9 0.5 1.7E-05 40.9 10.8 110 22-154 28-142 (217)
170 3v97_A Ribosomal RNA large sub 93.8 0.2 6.7E-06 53.3 9.4 148 14-177 530-678 (703)
171 3dr5_A Putative O-methyltransf 93.7 0.17 5.7E-06 45.5 7.7 102 25-151 58-161 (221)
172 3dp7_A SAM-dependent methyltra 93.7 0.43 1.5E-05 45.7 10.9 106 22-152 178-286 (363)
173 3c3p_A Methyltransferase; NP_9 93.7 0.18 6.2E-06 43.7 7.6 105 21-152 54-159 (210)
174 3bgv_A MRNA CAP guanine-N7 met 93.7 0.53 1.8E-05 43.5 11.2 118 22-156 33-158 (313)
175 3lst_A CALO1 methyltransferase 93.7 0.39 1.3E-05 45.5 10.6 132 21-180 182-335 (348)
176 2hnk_A SAM-dependent O-methylt 93.6 0.067 2.3E-06 47.7 4.8 110 21-153 58-181 (239)
177 3u81_A Catechol O-methyltransf 93.6 0.45 1.5E-05 41.8 10.1 115 20-155 55-172 (221)
178 1g6q_1 HnRNP arginine N-methyl 93.5 0.21 7.3E-06 47.4 8.3 105 22-150 37-142 (328)
179 2avn_A Ubiquinone/menaquinone 93.4 0.14 4.9E-06 46.0 6.7 101 23-155 54-154 (260)
180 3ege_A Putative methyltransfer 93.4 0.9 3.1E-05 40.8 12.0 125 22-182 33-179 (261)
181 2yqz_A Hypothetical protein TT 93.4 0.24 8.1E-06 43.7 8.0 107 20-154 36-142 (263)
182 3r0q_C Probable protein argini 93.4 0.14 4.7E-06 49.8 6.9 110 20-154 60-170 (376)
183 3ntv_A MW1564 protein; rossman 93.3 0.17 5.9E-06 45.1 7.0 104 22-151 70-174 (232)
184 3q87_B N6 adenine specific DNA 93.2 0.39 1.3E-05 40.8 8.7 125 23-179 23-147 (170)
185 2h00_A Methyltransferase 10 do 92.9 2.3 7.8E-05 37.8 13.8 150 23-181 65-238 (254)
186 3lbf_A Protein-L-isoaspartate 92.9 0.56 1.9E-05 40.3 9.4 102 22-156 76-177 (210)
187 2p35_A Trans-aconitate 2-methy 92.9 0.81 2.8E-05 40.3 10.6 103 22-155 32-134 (259)
188 2y1w_A Histone-arginine methyl 92.8 0.48 1.6E-05 45.4 9.7 106 22-153 49-155 (348)
189 3g07_A 7SK snRNA methylphospha 92.7 0.21 7.2E-06 46.3 6.9 34 23-57 46-79 (292)
190 1o9g_A RRNA methyltransferase; 92.7 0.35 1.2E-05 43.3 8.1 120 23-152 51-213 (250)
191 2ld4_A Anamorsin; methyltransf 92.7 0.43 1.5E-05 40.0 8.2 112 21-173 10-128 (176)
192 3dou_A Ribosomal RNA large sub 92.7 0.23 8E-06 43.6 6.8 116 19-157 21-143 (191)
193 1jg1_A PIMT;, protein-L-isoasp 92.6 0.48 1.6E-05 42.0 8.8 105 21-157 89-193 (235)
194 2bm8_A Cephalosporin hydroxyla 92.6 0.29 1E-05 44.3 7.5 103 23-153 81-187 (236)
195 1pjz_A Thiopurine S-methyltran 92.6 0.93 3.2E-05 39.6 10.5 135 22-183 21-178 (203)
196 3jwg_A HEN1, methyltransferase 92.5 0.57 1.9E-05 40.5 9.0 110 22-154 28-142 (219)
197 1sui_A Caffeoyl-COA O-methyltr 92.2 0.18 6.1E-06 46.0 5.6 108 20-152 76-189 (247)
198 1zx0_A Guanidinoacetate N-meth 92.2 0.063 2.1E-06 47.7 2.5 110 22-153 59-170 (236)
199 1ne2_A Hypothetical protein TA 92.1 0.72 2.5E-05 39.5 9.0 118 22-178 50-167 (200)
200 1p91_A Ribosomal RNA large sub 91.9 0.27 9.2E-06 44.1 6.4 98 22-156 84-181 (269)
201 1nv8_A HEMK protein; class I a 91.9 0.6 2E-05 43.7 9.0 117 23-155 123-251 (284)
202 3cbg_A O-methyltransferase; cy 91.8 0.21 7.1E-06 44.7 5.4 108 22-152 71-181 (232)
203 3tm4_A TRNA (guanine N2-)-meth 91.6 0.92 3.1E-05 43.9 10.2 136 21-182 215-353 (373)
204 3r3h_A O-methyltransferase, SA 91.6 0.071 2.4E-06 48.6 2.2 108 20-152 57-169 (242)
205 2gb4_A Thiopurine S-methyltran 91.4 1.3 4.4E-05 40.8 10.5 133 23-181 68-227 (252)
206 3m33_A Uncharacterized protein 91.4 0.74 2.5E-05 40.5 8.6 118 22-180 47-166 (226)
207 3c3y_A Pfomt, O-methyltransfer 91.3 0.13 4.3E-06 46.4 3.4 110 20-152 67-180 (237)
208 2aot_A HMT, histamine N-methyl 91.0 0.52 1.8E-05 43.2 7.4 116 23-155 52-174 (292)
209 1uwv_A 23S rRNA (uracil-5-)-me 91.0 3 0.0001 41.2 13.3 136 22-189 285-420 (433)
210 1fp1_D Isoliquiritigenin 2'-O- 90.9 0.78 2.7E-05 43.8 8.7 127 21-180 207-359 (372)
211 2g72_A Phenylethanolamine N-me 90.6 3.2 0.00011 37.7 12.2 147 23-182 71-257 (289)
212 2xyq_A Putative 2'-O-methyl tr 90.4 1.1 3.7E-05 42.9 9.2 128 20-179 60-195 (290)
213 3iv6_A Putative Zn-dependent a 90.1 0.93 3.2E-05 42.6 8.4 109 21-157 43-152 (261)
214 3c6k_A Spermine synthase; sper 90.1 0.085 2.9E-06 53.0 1.3 138 24-171 206-350 (381)
215 1vbf_A 231AA long hypothetical 90.0 0.61 2.1E-05 40.6 6.6 101 21-156 68-168 (231)
216 4a6d_A Hydroxyindole O-methylt 90.0 2.6 9E-05 40.2 11.6 135 20-180 176-333 (353)
217 3thr_A Glycine N-methyltransfe 89.9 0.2 6.7E-06 45.5 3.4 114 23-155 57-177 (293)
218 2jjq_A Uncharacterized RNA met 89.5 4.2 0.00014 40.5 13.0 127 21-188 288-414 (425)
219 3ggd_A SAM-dependent methyltra 89.4 0.74 2.5E-05 40.5 6.7 113 18-154 51-164 (245)
220 2qfm_A Spermine synthase; sper 89.1 0.24 8.2E-06 49.4 3.6 119 23-155 188-316 (364)
221 3orh_A Guanidinoacetate N-meth 87.6 0.4 1.4E-05 43.1 3.8 109 22-151 59-168 (236)
222 4fzv_A Putative methyltransfer 87.5 2.1 7.3E-05 42.2 9.2 95 69-166 188-297 (359)
223 2a14_A Indolethylamine N-methy 86.1 2.6 8.7E-05 38.1 8.3 146 22-182 54-239 (263)
224 1zg3_A Isoflavanone 4'-O-methy 86.0 2.5 8.7E-05 39.9 8.6 126 22-180 192-346 (358)
225 2p41_A Type II methyltransfera 86.0 0.89 3.1E-05 43.3 5.4 113 19-156 78-194 (305)
226 3axs_A Probable N(2),N(2)-dime 84.4 0.63 2.2E-05 46.4 3.7 108 23-157 52-162 (392)
227 3kr9_A SAM-dependent methyltra 84.3 9.1 0.00031 35.2 11.3 124 23-178 15-140 (225)
228 3b3j_A Histone-arginine methyl 84.1 1.8 6.3E-05 43.8 7.1 105 22-153 157-263 (480)
229 1u2z_A Histone-lysine N-methyl 84.0 3.3 0.00011 41.8 8.9 112 22-152 241-358 (433)
230 3reo_A (ISO)eugenol O-methyltr 83.2 12 0.00041 35.8 12.0 128 21-181 201-355 (368)
231 3bt7_A TRNA (uracil-5-)-methyl 82.6 1.6 5.6E-05 42.0 5.7 131 24-188 214-356 (369)
232 1fp2_A Isoflavone O-methyltran 82.0 11 0.00036 35.6 11.0 127 21-180 186-340 (352)
233 2dul_A N(2),N(2)-dimethylguano 81.6 0.81 2.8E-05 45.0 3.2 105 23-155 47-166 (378)
234 3gnl_A Uncharacterized protein 81.5 10 0.00035 35.5 10.6 125 23-178 21-146 (244)
235 3p9c_A Caffeic acid O-methyltr 80.8 22 0.00075 34.0 12.9 128 21-181 199-353 (364)
236 4hc4_A Protein arginine N-meth 80.7 4.1 0.00014 40.3 7.9 109 23-156 83-199 (376)
237 3gdh_A Trimethylguanosine synt 80.7 1.6 5.4E-05 38.4 4.5 80 22-115 77-157 (241)
238 2f8l_A Hypothetical protein LM 80.0 5 0.00017 37.9 8.0 151 23-187 130-291 (344)
239 2h1r_A Dimethyladenosine trans 79.9 7.4 0.00025 36.4 9.1 78 22-114 41-118 (299)
240 3two_A Mannitol dehydrogenase; 78.8 12 0.0004 35.2 10.1 117 20-178 173-291 (348)
241 3lec_A NADB-rossmann superfami 76.7 23 0.0008 32.7 11.3 131 23-184 21-153 (230)
242 3llv_A Exopolyphosphatase-rela 76.0 3.6 0.00012 33.3 5.0 73 24-111 6-79 (141)
243 3gru_A Dimethyladenosine trans 74.3 10 0.00036 36.0 8.4 77 22-113 49-125 (295)
244 4dvj_A Putative zinc-dependent 72.0 9.3 0.00032 36.4 7.5 96 23-152 171-269 (363)
245 3s2e_A Zinc-containing alcohol 71.5 4.1 0.00014 38.1 4.8 99 20-152 163-262 (340)
246 2vdw_A Vaccinia virus capping 71.1 11 0.00038 35.3 7.7 111 23-154 48-170 (302)
247 4hg2_A Methyltransferase type 70.4 13 0.00046 34.1 8.0 103 17-154 32-136 (257)
248 3hp7_A Hemolysin, putative; st 67.3 49 0.0017 31.5 11.4 127 23-180 85-231 (291)
249 2oxt_A Nucleoside-2'-O-methylt 65.9 17 0.00058 33.7 7.7 117 19-161 70-191 (265)
250 1zq9_A Probable dimethyladenos 64.2 30 0.001 32.0 9.1 78 22-114 27-105 (285)
251 3ek2_A Enoyl-(acyl-carrier-pro 63.0 10 0.00034 33.6 5.4 81 18-110 8-100 (271)
252 2zig_A TTHA0409, putative modi 62.8 19 0.00063 33.5 7.4 102 80-183 20-138 (297)
253 1pl8_A Human sorbitol dehydrog 61.9 11 0.00037 35.6 5.7 100 20-152 168-272 (356)
254 3c85_A Putative glutathione-re 61.6 12 0.00039 31.7 5.3 74 24-111 39-114 (183)
255 2wa2_A Non-structural protein 61.6 25 0.00085 32.8 8.0 115 20-160 79-198 (276)
256 3goh_A Alcohol dehydrogenase, 60.9 7.9 0.00027 35.8 4.5 89 20-152 139-228 (315)
257 1boo_A Protein (N-4 cytosine-s 60.3 18 0.0006 34.4 6.9 95 85-182 18-121 (323)
258 1wma_A Carbonyl reductase [NAD 59.3 6.3 0.00021 34.5 3.3 121 23-152 3-137 (276)
259 3tqs_A Ribosomal RNA small sub 59.3 19 0.00064 33.3 6.7 93 22-139 28-120 (255)
260 3jv7_A ADH-A; dehydrogenase, n 57.2 10 0.00035 35.5 4.6 99 20-152 168-269 (345)
261 4ej6_A Putative zinc-binding d 56.9 13 0.00044 35.5 5.3 100 20-152 179-283 (370)
262 2qe6_A Uncharacterized protein 56.7 66 0.0022 29.5 9.9 111 23-156 77-199 (274)
263 3fwz_A Inner membrane protein 56.7 15 0.00052 29.9 5.1 74 24-112 7-81 (140)
264 3htx_A HEN1; HEN1, small RNA m 55.7 1E+02 0.0036 34.4 12.7 110 23-154 721-835 (950)
265 1e3j_A NADP(H)-dependent ketos 55.3 19 0.00064 33.9 6.0 99 20-152 165-270 (352)
266 1pqw_A Polyketide synthase; ro 55.2 15 0.00051 31.2 4.9 95 20-151 35-135 (198)
267 3jyn_A Quinone oxidoreductase; 55.0 15 0.00051 34.1 5.3 121 20-175 137-261 (325)
268 1f8f_A Benzyl alcohol dehydrog 54.3 17 0.00057 34.4 5.6 100 20-152 187-288 (371)
269 1p0f_A NADP-dependent alcohol 54.2 25 0.00084 33.3 6.7 100 20-152 188-292 (373)
270 1e3i_A Alcohol dehydrogenase, 54.1 22 0.00074 33.7 6.3 100 20-152 192-296 (376)
271 3ijr_A Oxidoreductase, short c 53.9 43 0.0015 30.6 8.2 123 23-153 46-182 (291)
272 3v2g_A 3-oxoacyl-[acyl-carrier 53.6 40 0.0014 30.5 7.8 123 23-153 30-165 (271)
273 3opn_A Putative hemolysin; str 52.2 85 0.0029 28.1 9.7 126 23-179 37-182 (232)
274 3oig_A Enoyl-[acyl-carrier-pro 52.2 42 0.0015 29.7 7.6 122 23-153 6-147 (266)
275 3s1s_A Restriction endonucleas 50.1 30 0.001 38.4 7.3 129 22-156 320-468 (878)
276 3uwp_A Histone-lysine N-methyl 49.8 35 0.0012 34.9 7.3 120 22-166 172-299 (438)
277 3ip1_A Alcohol dehydrogenase, 49.8 43 0.0015 32.2 7.7 76 20-108 210-288 (404)
278 3r3s_A Oxidoreductase; structu 48.6 46 0.0016 30.4 7.5 124 23-153 48-185 (294)
279 2fzw_A Alcohol dehydrogenase c 48.1 28 0.00096 32.8 6.0 98 20-152 187-291 (373)
280 2qy6_A UPF0209 protein YFCK; s 48.0 26 0.00088 32.5 5.7 146 23-194 60-240 (257)
281 2jhf_A Alcohol dehydrogenase E 47.9 34 0.0012 32.3 6.6 100 20-152 188-292 (374)
282 3l9w_A Glutathione-regulated p 47.6 18 0.00061 35.9 4.8 75 23-112 3-78 (413)
283 3is3_A 17BETA-hydroxysteroid d 47.4 44 0.0015 30.0 7.0 124 23-154 17-153 (270)
284 2aef_A Calcium-gated potassium 46.9 20 0.0007 31.5 4.6 75 20-111 5-80 (234)
285 1piw_A Hypothetical zinc-type 46.8 18 0.00063 34.1 4.5 97 20-151 176-274 (360)
286 3uko_A Alcohol dehydrogenase c 46.0 42 0.0014 31.8 6.9 100 20-152 190-294 (378)
287 3grk_A Enoyl-(acyl-carrier-pro 46.0 56 0.0019 29.9 7.6 122 23-153 30-169 (293)
288 1cdo_A Alcohol dehydrogenase; 46.0 36 0.0012 32.1 6.5 100 20-152 189-293 (374)
289 1g60_A Adenine-specific methyl 45.9 40 0.0014 30.6 6.5 82 100-184 21-102 (260)
290 3sju_A Keto reductase; short-c 44.5 14 0.00049 33.5 3.3 89 13-110 13-109 (279)
291 3o38_A Short chain dehydrogena 43.8 56 0.0019 28.9 7.0 80 23-110 21-109 (266)
292 1af7_A Chemotaxis receptor met 43.7 35 0.0012 31.9 5.9 46 100-157 211-256 (274)
293 2c0c_A Zinc binding alcohol de 43.3 27 0.00093 33.1 5.1 97 20-151 160-259 (362)
294 2okc_A Type I restriction enzy 42.9 41 0.0014 33.1 6.5 122 23-156 171-310 (445)
295 3bed_A PTS system, IIA compone 42.7 49 0.0017 27.8 6.2 58 25-87 6-70 (142)
296 1uuf_A YAHK, zinc-type alcohol 42.0 27 0.00093 33.3 4.9 95 20-151 191-286 (369)
297 3nrc_A Enoyl-[acyl-carrier-pro 40.6 60 0.0021 29.2 6.8 74 24-110 26-111 (280)
298 3k31_A Enoyl-(acyl-carrier-pro 40.5 49 0.0017 30.3 6.3 118 24-153 30-168 (296)
299 3ius_A Uncharacterized conserv 39.5 76 0.0026 27.9 7.2 69 25-114 6-75 (286)
300 3ksu_A 3-oxoacyl-acyl carrier 39.0 1.4E+02 0.0047 26.7 8.9 124 24-153 11-147 (262)
301 3h28_A Sulfide-quinone reducta 39.0 10 0.00034 36.6 1.4 43 72-114 206-256 (430)
302 1zsy_A Mitochondrial 2-enoyl t 38.1 80 0.0027 29.6 7.5 100 20-152 164-269 (357)
303 4b7c_A Probable oxidoreductase 37.0 34 0.0011 31.7 4.6 99 19-152 145-247 (336)
304 3qwb_A Probable quinone oxidor 36.6 26 0.00089 32.5 3.8 98 20-152 145-246 (334)
305 1rjw_A ADH-HT, alcohol dehydro 36.4 41 0.0014 31.4 5.1 96 20-151 161-259 (339)
306 3awd_A GOX2181, putative polyo 35.7 46 0.0016 29.0 5.1 79 23-110 12-98 (260)
307 3ldg_A Putative uncharacterize 34.8 3.1E+02 0.011 26.7 11.3 89 50-156 258-346 (384)
308 1ja9_A 4HNR, 1,3,6,8-tetrahydr 34.8 52 0.0018 28.8 5.3 80 23-110 20-107 (274)
309 2d8a_A PH0655, probable L-thre 34.7 58 0.002 30.4 5.9 96 23-151 167-265 (348)
310 3k0b_A Predicted N6-adenine-sp 34.4 2.6E+02 0.0088 27.3 10.7 53 51-113 266-318 (393)
311 1m6y_A S-adenosyl-methyltransf 33.0 23 0.00077 33.7 2.7 83 22-112 25-108 (301)
312 3lyl_A 3-oxoacyl-(acyl-carrier 32.4 37 0.0013 29.7 3.9 77 24-109 5-89 (247)
313 3ldu_A Putative methylase; str 32.4 2.9E+02 0.01 26.7 10.6 85 50-154 259-345 (385)
314 3sso_A Methyltransferase; macr 32.0 30 0.001 35.2 3.5 99 23-152 216-323 (419)
315 3nx4_A Putative oxidoreductase 31.3 79 0.0027 28.9 6.1 90 26-152 149-240 (324)
316 4fs3_A Enoyl-[acyl-carrier-pro 31.0 1.3E+02 0.0044 27.0 7.3 78 23-111 5-95 (256)
317 1vj0_A Alcohol dehydrogenase, 30.9 50 0.0017 31.5 4.8 99 21-152 193-297 (380)
318 1wly_A CAAR, 2-haloacrylate re 30.8 40 0.0014 31.2 4.0 96 20-152 142-243 (333)
319 1id1_A Putative potassium chan 30.6 77 0.0027 25.8 5.4 77 24-111 3-80 (153)
320 1g0o_A Trihydroxynaphthalene r 30.1 1.2E+02 0.0041 27.2 7.0 122 24-153 29-163 (283)
321 2eih_A Alcohol dehydrogenase; 30.1 42 0.0014 31.3 4.1 95 20-151 163-263 (343)
322 3fut_A Dimethyladenosine trans 30.0 99 0.0034 28.8 6.6 77 22-114 46-122 (271)
323 3lfh_A Manxa, phosphotransfera 30.0 1.4E+02 0.0046 25.4 6.9 54 26-84 5-67 (144)
324 3cvo_A Methyltransferase-like 30.0 2.4E+02 0.0083 25.3 9.0 98 22-150 29-151 (202)
325 1mio_B Nitrogenase molybdenum 29.7 21 0.00073 35.6 2.1 64 21-92 309-377 (458)
326 1lnq_A MTHK channels, potassiu 29.2 24 0.00081 33.0 2.2 72 22-110 113-185 (336)
327 3edm_A Short chain dehydrogena 29.1 1.3E+02 0.0045 26.7 7.0 80 23-110 7-94 (259)
328 3qiv_A Short-chain dehydrogena 29.1 34 0.0012 30.0 3.1 79 23-110 8-94 (253)
329 3sx6_A Sulfide-quinone reducta 29.0 14 0.00048 35.8 0.6 43 72-114 214-269 (437)
330 2j8z_A Quinone oxidoreductase; 28.7 43 0.0015 31.5 3.8 98 20-152 159-260 (354)
331 3fpc_A NADP-dependent alcohol 28.6 55 0.0019 30.6 4.6 100 20-152 163-265 (352)
332 1iz0_A Quinone oxidoreductase; 28.5 23 0.00079 32.4 1.9 91 21-151 123-216 (302)
333 2r6z_A UPF0341 protein in RSP 28.4 90 0.0031 28.6 5.9 85 22-112 82-171 (258)
334 2pjd_A Ribosomal RNA small sub 28.3 66 0.0023 30.2 5.1 93 25-154 21-113 (343)
335 3o26_A Salutaridine reductase; 28.0 48 0.0016 29.5 3.9 79 23-110 11-99 (311)
336 2dph_A Formaldehyde dismutase; 27.9 1.1E+02 0.0039 29.1 6.7 110 20-151 182-297 (398)
337 2cdc_A Glucose dehydrogenase g 27.5 98 0.0034 29.1 6.2 93 24-152 181-277 (366)
338 1pdo_A Mannose permease; phosp 27.5 61 0.0021 26.9 4.2 56 26-86 3-66 (135)
339 4dup_A Quinone oxidoreductase; 27.4 38 0.0013 31.9 3.2 98 20-152 164-264 (353)
340 1xa0_A Putative NADPH dependen 26.9 78 0.0027 29.1 5.2 93 22-151 147-244 (328)
341 4a2c_A Galactitol-1-phosphate 26.7 1.4E+02 0.0046 27.6 6.9 101 20-153 157-260 (346)
342 1v3u_A Leukotriene B4 12- hydr 26.5 76 0.0026 29.2 5.1 95 20-151 142-242 (333)
343 1yub_A Ermam, rRNA methyltrans 26.4 1.5 5.1E-05 39.5 -6.4 108 22-153 28-145 (245)
344 1gee_A Glucose 1-dehydrogenase 26.3 1.3E+02 0.0045 26.2 6.4 79 24-110 7-93 (261)
345 3mtq_A Putative phosphoenolpyr 26.2 50 0.0017 28.9 3.6 44 21-66 17-67 (159)
346 3ucx_A Short chain dehydrogena 26.1 2.2E+02 0.0074 25.2 7.9 79 23-110 10-96 (264)
347 1qsg_A Enoyl-[acyl-carrier-pro 26.1 73 0.0025 28.3 4.7 75 24-110 9-95 (265)
348 1qam_A ERMC' methyltransferase 26.0 2.3E+02 0.0077 25.3 8.0 77 22-113 29-105 (244)
349 2j3h_A NADP-dependent oxidored 25.7 66 0.0023 29.7 4.5 95 20-151 152-253 (345)
350 1qor_A Quinone oxidoreductase; 25.6 91 0.0031 28.6 5.4 96 20-152 137-238 (327)
351 3evf_A RNA-directed RNA polyme 25.5 68 0.0023 30.9 4.6 117 12-155 65-186 (277)
352 1tt7_A YHFP; alcohol dehydroge 25.3 96 0.0033 28.5 5.5 96 22-152 148-246 (330)
353 4e3z_A Putative oxidoreductase 25.3 1.8E+02 0.006 25.8 7.2 87 15-109 17-111 (272)
354 1yb1_A 17-beta-hydroxysteroid 24.9 64 0.0022 28.8 4.1 78 24-110 31-116 (272)
355 1kol_A Formaldehyde dehydrogen 24.8 1.4E+02 0.0049 28.2 6.8 111 20-151 182-298 (398)
356 3aek_A Light-independent proto 24.8 17 0.00057 36.2 0.3 39 20-58 303-343 (437)
357 3ipr_A PTS system, IIA compone 24.8 1.2E+02 0.004 25.8 5.6 57 26-87 3-67 (150)
358 4eye_A Probable oxidoreductase 24.8 32 0.0011 32.2 2.2 97 20-152 156-256 (342)
359 2hmt_A YUAA protein; RCK, KTN, 24.5 65 0.0022 25.0 3.7 74 24-112 6-80 (144)
360 3l77_A Short-chain alcohol deh 24.5 2.5E+02 0.0085 24.0 7.8 78 24-110 2-88 (235)
361 1yb5_A Quinone oxidoreductase; 24.4 52 0.0018 31.0 3.6 97 20-151 167-267 (351)
362 3krt_A Crotonyl COA reductase; 24.4 53 0.0018 32.2 3.8 53 20-86 225-279 (456)
363 3uzu_A Ribosomal RNA small sub 24.3 1.6E+02 0.0054 27.5 6.8 82 22-113 41-125 (279)
364 3rkr_A Short chain oxidoreduct 24.2 37 0.0013 30.2 2.4 78 24-110 29-114 (262)
365 2pju_A Propionate catabolism o 24.2 1.4E+02 0.0046 27.4 6.2 53 25-86 107-160 (225)
366 4dcm_A Ribosomal RNA large sub 24.1 1.7E+02 0.006 28.1 7.3 99 24-156 39-139 (375)
367 2ae2_A Protein (tropinone redu 23.7 73 0.0025 28.2 4.3 79 23-110 8-95 (260)
368 3v97_A Ribosomal RNA large sub 23.4 5.6E+02 0.019 27.0 11.6 106 50-181 258-366 (703)
369 1jvb_A NAD(H)-dependent alcoho 23.4 74 0.0025 29.6 4.4 96 20-151 167-269 (347)
370 3tjr_A Short chain dehydrogena 23.0 64 0.0022 29.6 3.8 78 23-109 30-115 (301)
371 3h7a_A Short chain dehydrogena 22.7 65 0.0022 28.6 3.7 79 23-110 6-91 (252)
372 2pd4_A Enoyl-[acyl-carrier-pro 22.6 1.6E+02 0.0054 26.2 6.3 77 24-110 6-92 (275)
373 4ibo_A Gluconate dehydrogenase 22.4 53 0.0018 29.7 3.1 78 24-110 26-111 (271)
374 1xq1_A Putative tropinone redu 22.1 1.5E+02 0.005 26.0 5.9 79 23-110 13-100 (266)
375 3fbg_A Putative arginate lyase 21.9 54 0.0018 30.6 3.1 94 23-151 150-246 (346)
376 4da9_A Short-chain dehydrogena 21.6 1.5E+02 0.0051 26.7 6.0 79 24-110 29-115 (280)
377 4a0s_A Octenoyl-COA reductase/ 21.5 70 0.0024 31.0 3.9 54 19-86 216-271 (447)
378 3gk3_A Acetoacetyl-COA reducta 21.4 1.9E+02 0.0064 25.7 6.5 80 23-110 24-111 (269)
379 3gms_A Putative NADPH:quinone 21.4 50 0.0017 30.7 2.8 98 20-152 141-242 (340)
380 2bd0_A Sepiapterin reductase; 21.3 1.3E+02 0.0046 25.8 5.4 77 24-109 2-93 (244)
381 3gpi_A NAD-dependent epimerase 21.1 1.2E+02 0.004 26.9 5.0 94 24-140 3-97 (286)
382 3u5t_A 3-oxoacyl-[acyl-carrier 21.1 3.3E+02 0.011 24.3 8.2 121 23-153 26-161 (267)
383 2p91_A Enoyl-[acyl-carrier-pro 21.1 2.3E+02 0.0078 25.3 7.1 76 23-110 20-107 (285)
384 1sby_A Alcohol dehydrogenase; 20.6 2.5E+02 0.0086 24.4 7.1 108 24-143 5-122 (254)
385 2b5w_A Glucose dehydrogenase; 20.4 76 0.0026 29.8 3.8 96 25-152 174-272 (357)
386 3ioy_A Short-chain dehydrogena 20.4 1.8E+02 0.0063 26.8 6.4 79 23-110 7-95 (319)
387 3tka_A Ribosomal RNA small sub 20.2 37 0.0013 33.7 1.7 36 120-155 239-276 (347)
388 3ll7_A Putative methyltransfer 20.2 94 0.0032 31.1 4.6 82 23-115 93-176 (410)
389 3e8x_A Putative NAD-dependent 20.2 4E+02 0.014 22.6 15.0 137 23-181 20-171 (236)
390 3d7l_A LIN1944 protein; APC893 20.0 46 0.0016 27.9 2.0 33 25-58 4-36 (202)
No 1
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.82 E-value=0.00015 Score=62.39 Aligned_cols=156 Identities=12% Similarity=0.076 Sum_probs=96.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.++.+||=+|=|.=.++..|++.++....++|.-.+ +++.+ .+++|++...-..-.-+...|+.++... ...
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~ 92 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQ--DKAIA---NTTKKLTDLNLIDRVTLIKDGHQNMDKY---IDC 92 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSC--HHHHH---HHHHHHHHTTCGGGEEEECSCGGGGGGT---CCS
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECC--HHHHH---HHHHHHHHcCCCCCeEEEECCHHHHhhh---ccC
Confidence 457899999999999999999987544466665444 33333 2556655432111134456677776532 236
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHH---HHHh---hCCcEE
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIK---ELAI---GSSLSL 175 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe---~LAa---~aGL~L 175 (389)
.||.|++|+|....... .+..+.+....+++.+..+|+++|.+.+....+.+....... ...+ ..++.+
T Consensus 93 ~fD~v~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v 167 (197)
T 3eey_A 93 PVKAVMFNLGYLPSGDH-----SISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIV 167 (197)
T ss_dssp CEEEEEEEESBCTTSCT-----TCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEE
T ss_pred CceEEEEcCCcccCccc-----ccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEE
Confidence 89999999977432111 111233345569999999999999999998776543332222 2222 346777
Q ss_pred EEEeeCCCCCCCCCc
Q 016441 176 IWCSEFKIEDYPAYN 190 (389)
Q Consensus 176 ~~~~~F~~~~YPGY~ 190 (389)
.....+....-|+|-
T Consensus 168 ~~~~~~~~~~~pp~~ 182 (197)
T 3eey_A 168 QRTDFINQANCPPIL 182 (197)
T ss_dssp EEEEETTCCSCCCEE
T ss_pred EEEEeccCccCCCeE
Confidence 766666555555443
No 2
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.74 E-value=0.00033 Score=58.78 Aligned_cols=129 Identities=18% Similarity=0.126 Sum_probs=90.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||=||=|.=.++..|++. +.+++++-.+ .++.+ .+..++ .++.+. ..|+.++. +...
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~--~~~~~---~a~~~~-----~~~~~~-~~d~~~~~----~~~~ 106 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLD--PILID---YAKQDF-----PEARWV-VGDLSVDQ----ISET 106 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHC-----TTSEEE-ECCTTTSC----CCCC
T ss_pred cCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCC--HHHHH---HHHHhC-----CCCcEE-EcccccCC----CCCC
Confidence 46779999999999999999886 3467766554 22222 133332 134443 44777653 3457
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEEe
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWCS 179 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~ 179 (389)
.||.|+.+.+-.... ...-...+++.+..+|+++|.+.++......++.-.+.++.+++|+.+.+..
T Consensus 107 ~~D~i~~~~~~~~~~-----------~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 173 (195)
T 3cgg_A 107 DFDLIVSAGNVMGFL-----------AEDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAF 173 (195)
T ss_dssp CEEEEEECCCCGGGS-----------CHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEE
T ss_pred ceeEEEECCcHHhhc-----------ChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeee
Confidence 899999985533321 1122468889999999999999999888777788888899999999988764
No 3
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=97.73 E-value=0.00016 Score=61.62 Aligned_cols=120 Identities=11% Similarity=0.067 Sum_probs=75.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.++.+||=+|=|.=.++..|++. +..|+|.-.+ +++.+ .|++|++...-..++++. -|+..+.... ..
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s--~~~l~---~a~~~~~~~~~~~v~~~~-~~~~~l~~~~---~~ 88 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQ--EQALG---KTSQRLSDLGIENTELIL-DGHENLDHYV---RE 88 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESC--HHHHH---HHHHHHHHHTCCCEEEEE-SCGGGGGGTC---CS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECC--HHHHH---HHHHHHHHcCCCcEEEEe-CcHHHHHhhc---cC
Confidence 46789999999999999999986 3466665443 33333 366677665434466666 5666654322 46
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCC
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVP 158 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P 158 (389)
.||.|++|+|+.-. +. ..+..+..-...+++.+..+|+|||.+.|+...+.+
T Consensus 89 ~fD~v~~~~~~~~~-~~----~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 140 (185)
T 3mti_A 89 PIRAAIFNLGYLPS-AD----KSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHD 140 (185)
T ss_dssp CEEEEEEEEC----------------CHHHHHHHHHHHHHHEEEEEEEEEEEC----
T ss_pred CcCEEEEeCCCCCC-cc----hhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCC
Confidence 79999999876642 11 123334455567889999999999999999887755
No 4
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.73 E-value=0.00024 Score=62.48 Aligned_cols=148 Identities=17% Similarity=0.172 Sum_probs=93.8
Q ss_pred cccccCCCC-CCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCC
Q 016441 15 EKWIKHYSS-NHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTME 93 (389)
Q Consensus 15 ~K~~~~Yss-~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~ 93 (389)
..|...|.. +.+||=||=|.=.|+..||+.+. ..+++|.-.+ .+..+ .|..|++...-.++.+ ..-|+..+.
T Consensus 32 ~~~~~~f~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s--~~~l~---~a~~~~~~~~~~~v~~-~~~d~~~~~ 104 (214)
T 1yzh_A 32 AKWRDLFGNDNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQ--KSVLS---YALDKVLEVGVPNIKL-LWVDGSDLT 104 (214)
T ss_dssp TTHHHHHTSCCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESC--HHHHH---HHHHHHHHHCCSSEEE-EECCSSCGG
T ss_pred cCHHHHcCCCCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcC--HHHHH---HHHHHHHHcCCCCEEE-EeCCHHHHH
Confidence 356655653 67899999999999999998863 4567766544 23332 2566665543223444 445777654
Q ss_pred CCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCc
Q 016441 94 LHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSL 173 (389)
Q Consensus 94 ~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL 173 (389)
.. +....||.|+.|||..-.+.+ . ...+.....|+..+..+|+++|.+.+.... .++.. .+.++.+++|+
T Consensus 105 ~~--~~~~~~D~i~~~~~~~~~~~~-~-----~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-~~~~~-~~~~~~~~~g~ 174 (214)
T 1yzh_A 105 DY--FEDGEIDRLYLNFSDPWPKKR-H-----EKRRLTYKTFLDTFKRILPENGEIHFKTDN-RGLFE-YSLVSFSQYGM 174 (214)
T ss_dssp GT--SCTTCCSEEEEESCCCCCSGG-G-----GGGSTTSHHHHHHHHHHSCTTCEEEEEESC-HHHHH-HHHHHHHHHTC
T ss_pred hh--cCCCCCCEEEEECCCCccccc-h-----hhhccCCHHHHHHHHHHcCCCcEEEEEeCC-HHHHH-HHHHHHHHCCC
Confidence 32 345679999999996532111 0 011223568899999999999999987532 22333 34445566789
Q ss_pred EEEEEe
Q 016441 174 SLIWCS 179 (389)
Q Consensus 174 ~L~~~~ 179 (389)
.+....
T Consensus 175 ~~~~~~ 180 (214)
T 1yzh_A 175 KLNGVW 180 (214)
T ss_dssp EEEEEE
T ss_pred eeeecc
Confidence 887754
No 5
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.64 E-value=0.00063 Score=64.81 Aligned_cols=145 Identities=17% Similarity=0.190 Sum_probs=100.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.++.+||=+|=|.=.++..||+..+....|+|.-.+. ...+ .+..|++.+.-.++.+ ..-|++++.. ...
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~--~~l~---~a~~~~~~~g~~~v~~-~~~D~~~~~~----~~~ 186 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDE--NRLR---ETRLNLSRLGVLNVIL-FHSSSLHIGE----LNV 186 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCH--HHHH---HHHHHHHHHTCCSEEE-ESSCGGGGGG----GCC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCH--HHHH---HHHHHHHHhCCCeEEE-EECChhhccc----ccc
Confidence 4678999999999999999998875445677765442 2222 3667776654334444 4458887643 235
Q ss_pred CcceEEEcCCCCCCCCC----cc-----chHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCC-CcccHHHHHhhC
Q 016441 102 KFDRIIFNFPHAGFYGK----ED-----NHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPF-SNWNIKELAIGS 171 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gk----ED-----~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY-~sWnIe~LAa~a 171 (389)
.||+|+.|-|..|. |. .+ ....+.....+-..+++.+..+|++||.+.++.|+-.|- +.-.|..+.++.
T Consensus 187 ~fD~Il~d~Pcsg~-g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~ 265 (315)
T 1ixk_A 187 EFDKILLDAPCTGS-GTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNF 265 (315)
T ss_dssp CEEEEEEECCTTST-TTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHS
T ss_pred cCCEEEEeCCCCCc-ccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcC
Confidence 79999999998773 21 10 123344556667899999999999999999998886654 445667777778
Q ss_pred CcEEEE
Q 016441 172 SLSLIW 177 (389)
Q Consensus 172 GL~L~~ 177 (389)
++.++.
T Consensus 266 ~~~~~~ 271 (315)
T 1ixk_A 266 DVELLP 271 (315)
T ss_dssp SEEEEC
T ss_pred CCEEec
Confidence 877653
No 6
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=97.62 E-value=0.00076 Score=58.59 Aligned_cols=138 Identities=12% Similarity=0.193 Sum_probs=94.2
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
..+..+||=||=|.=.++..|++..+....+++.-.+ +++.+ .++.++....-.++. ....|+.++. +..
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~~-~~~~d~~~~~----~~~ 104 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQ--EEMVN---YAWEKVNKLGLKNVE-VLKSEENKIP----LPD 104 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESC--HHHHH---HHHHHHHHHTCTTEE-EEECBTTBCS----SCS
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECC--HHHHH---HHHHHHHHcCCCcEE-EEecccccCC----CCC
Confidence 3567799999999999999999987544566655443 33332 244555443322333 3455777654 345
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC----------CCCcccHHHHHhh
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV----------PFSNWNIKELAIG 170 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~----------PY~sWnIe~LAa~ 170 (389)
..||.|+.+..---. ++ ...+++.+..+|+++|.+.++-.... .++...+..+.++
T Consensus 105 ~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (219)
T 3dh0_A 105 NTVDFIFMAFTFHEL---SE-----------PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILED 170 (219)
T ss_dssp SCEEEEEEESCGGGC---SS-----------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHH
T ss_pred CCeeEEEeehhhhhc---CC-----------HHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHH
Confidence 789999998653322 11 25788899999999999998764321 1456788889999
Q ss_pred CCcEEEEEeeCC
Q 016441 171 SSLSLIWCSEFK 182 (389)
Q Consensus 171 aGL~L~~~~~F~ 182 (389)
+||..++...+.
T Consensus 171 ~Gf~~~~~~~~~ 182 (219)
T 3dh0_A 171 AGIRVGRVVEVG 182 (219)
T ss_dssp TTCEEEEEEEET
T ss_pred CCCEEEEEEeeC
Confidence 999999887664
No 7
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.56 E-value=0.00091 Score=58.85 Aligned_cols=144 Identities=15% Similarity=0.122 Sum_probs=90.9
Q ss_pred CCCCCeEEEEecC-ChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcC
Q 016441 21 YSSNHQILLVGEG-DFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 21 Yss~~rILLVGEG-DFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk 99 (389)
..++.+||=+|=| .=.++..|++.. +..++|+-.+. ++.+ .++.|++...- .+.++ .-|++.+.. +.
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~--~~~~---~a~~~~~~~~~-~v~~~-~~d~~~~~~---~~ 120 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDE--EFFE---YARRNIERNNS-NVRLV-KSNGGIIKG---VV 120 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCH--HHHH---HHHHHHHHTTC-CCEEE-ECSSCSSTT---TC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCH--HHHH---HHHHHHHHhCC-CcEEE-eCCchhhhh---cc
Confidence 3567899999999 999999999876 45777766653 2222 25566654432 34444 446654433 23
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHH------HHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCc
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLI------EMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSL 173 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~I------r~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL 173 (389)
...||.|+.|.|-... +.++..... ....+++..|++.+..+|+++|.+.+....+. ...-.+.++.++.|+
T Consensus 121 ~~~fD~I~~npp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~l~~~g~ 198 (230)
T 3evz_A 121 EGTFDVIFSAPPYYDK-PLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE-KLLNVIKERGIKLGY 198 (230)
T ss_dssp CSCEEEEEECCCCC----------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-HHHHHHHHHHHHTTC
T ss_pred cCceeEEEECCCCcCC-ccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-hHHHHHHHHHHHcCC
Confidence 4789999999886542 111100000 01224468899999999999999999765542 233466778888999
Q ss_pred EEEEE
Q 016441 174 SLIWC 178 (389)
Q Consensus 174 ~L~~~ 178 (389)
.+...
T Consensus 199 ~~~~~ 203 (230)
T 3evz_A 199 SVKDI 203 (230)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 76654
No 8
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=97.51 E-value=0.002 Score=58.27 Aligned_cols=147 Identities=13% Similarity=0.045 Sum_probs=97.3
Q ss_pred ccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCC
Q 016441 18 IKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPD 97 (389)
Q Consensus 18 ~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~ 97 (389)
+....+..+||=||=|.=.++..|++. ....++++-.+ ....+ .++++++...-.+-.-....|+.++.
T Consensus 41 l~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s--~~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~~---- 109 (267)
T 3kkz_A 41 IDNLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFL--SGFID---IFNRNARQSGLQNRVTGIVGSMDDLP---- 109 (267)
T ss_dssp CCCCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESC--HHHHH---HHHHHHHHTTCTTTEEEEECCTTSCC----
T ss_pred cccCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCC--HHHHH---HHHHHHHHcCCCcCcEEEEcChhhCC----
Confidence 334567889999999999999999987 24467766554 22222 24444433221121334556777654
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC---CCCC----Ccc--------
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT---TVPF----SNW-------- 162 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~---g~PY----~sW-------- 162 (389)
+....||.|+.+.+---. + ...+++.+..+|+|+|.+.++-.. ..+. ..|
T Consensus 110 ~~~~~fD~i~~~~~~~~~----~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (267)
T 3kkz_A 110 FRNEELDLIWSEGAIYNI----G-----------FERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEID 174 (267)
T ss_dssp CCTTCEEEEEESSCGGGT----C-----------HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCE
T ss_pred CCCCCEEEEEEcCCceec----C-----------HHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCC
Confidence 345789999998763321 1 246899999999999999887532 2111 234
Q ss_pred ---cHHHHHhhCCcEEEEEeeCCCCCC-CCCc
Q 016441 163 ---NIKELAIGSSLSLIWCSEFKIEDY-PAYN 190 (389)
Q Consensus 163 ---nIe~LAa~aGL~L~~~~~F~~~~Y-PGY~ 190 (389)
.+.++.+++||.+++...+....| ..|.
T Consensus 175 ~~~~~~~~l~~aGf~~v~~~~~~~~~w~~~~~ 206 (267)
T 3kkz_A 175 TIPNQVAKIHKAGYLPVATFILPENCWTDHYF 206 (267)
T ss_dssp EHHHHHHHHHHTTEEEEEEEECCGGGTTTTTH
T ss_pred CHHHHHHHHHHCCCEEEEEEECCHhHHHHHHH
Confidence 677788999999999998886666 5554
No 9
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.48 E-value=0.0019 Score=57.47 Aligned_cols=143 Identities=14% Similarity=0.022 Sum_probs=94.3
Q ss_pred ccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCC
Q 016441 18 IKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPD 97 (389)
Q Consensus 18 ~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~ 97 (389)
+....+..+||=||=|.=.++..|++..+ ..++++-.+ ....+ .++.++....-.+-.-....|++++.
T Consensus 41 l~~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~~~~~~~d~~~~~---- 109 (257)
T 3f4k_A 41 INELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLF--PDFIE---IFNENAVKANCADRVKGITGSMDNLP---- 109 (257)
T ss_dssp SCCCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESC--HHHHH---HHHHHHHHTTCTTTEEEEECCTTSCS----
T ss_pred HhcCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECC--HHHHH---HHHHHHHHcCCCCceEEEECChhhCC----
Confidence 34556778999999999999999999864 366666544 22322 24444433221121334566776654
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC---CCC---------------C
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT---TVP---------------F 159 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~---g~P---------------Y 159 (389)
+....||.|+.+..---. + ...+++.+..+|+|+|.+.|+-.. ..+ .
T Consensus 110 ~~~~~fD~v~~~~~l~~~----~-----------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (257)
T 3f4k_A 110 FQNEELDLIWSEGAIYNI----G-----------FERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEIS 174 (257)
T ss_dssp SCTTCEEEEEEESCSCCC----C-----------HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEEEEecChHhhc----C-----------HHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCC
Confidence 345789999998543221 1 236889999999999999988532 111 1
Q ss_pred CcccHHHHHhhCCcEEEEEeeCCCCCC
Q 016441 160 SNWNIKELAIGSSLSLIWCSEFKIEDY 186 (389)
Q Consensus 160 ~sWnIe~LAa~aGL~L~~~~~F~~~~Y 186 (389)
+.-.+.++.+++||..++...+....|
T Consensus 175 ~~~~~~~~l~~aGf~~v~~~~~~~~~w 201 (257)
T 3f4k_A 175 VIPTCIDKMERAGYTPTAHFILPENCW 201 (257)
T ss_dssp BHHHHHHHHHHTTEEEEEEEECCGGGT
T ss_pred CHHHHHHHHHHCCCeEEEEEECChhhH
Confidence 222456788899999999988887666
No 10
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.43 E-value=0.00097 Score=58.84 Aligned_cols=135 Identities=16% Similarity=0.099 Sum_probs=86.2
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
..++.+||=+|=|.=.++..|++.++....+++. |...+..+ .+.+|.+.. .++.++ ..|+.+......+ .
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~v--D~s~~~~~---~~~~~~~~~--~~v~~~-~~d~~~~~~~~~~-~ 141 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGI--EFSPRVLR---ELVPIVEER--RNIVPI-LGDATKPEEYRAL-V 141 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEE--ESCHHHHH---HHHHHHSSC--TTEEEE-ECCTTCGGGGTTT-C
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEE--ECCHHHHH---HHHHHHhcc--CCCEEE-EccCCCcchhhcc-c
Confidence 4567899999999999999999987644567665 53333322 234444332 345544 4477764211112 2
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC-----C---CCcccHHHHHhhCC
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV-----P---FSNWNIKELAIGSS 172 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~-----P---Y~sWnIe~LAa~aG 172 (389)
..||.|+.+.|+.. ....++..+..+|+++|.+.++.+... | +....+.++ .++
T Consensus 142 ~~~D~v~~~~~~~~----------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~- 203 (227)
T 1g8a_A 142 PKVDVIFEDVAQPT----------------QAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY- 203 (227)
T ss_dssp CCEEEEEECCCSTT----------------HHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-
T ss_pred CCceEEEECCCCHh----------------HHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-
Confidence 47999999988221 133568889999999999999865321 1 112456667 556
Q ss_pred cEEEEEeeCC
Q 016441 173 LSLIWCSEFK 182 (389)
Q Consensus 173 L~L~~~~~F~ 182 (389)
|.+++...+.
T Consensus 204 f~~~~~~~~~ 213 (227)
T 1g8a_A 204 FEVIERLNLE 213 (227)
T ss_dssp SEEEEEEECT
T ss_pred ceeeeEeccC
Confidence 9888877653
No 11
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.38 E-value=0.0011 Score=60.29 Aligned_cols=147 Identities=16% Similarity=0.179 Sum_probs=93.6
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
+..+||=+|=|.=.+++.|++.. +..|+|.-.+ +++.+ .|+.|++...-.+-..+...|+.++... +...+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~--~~~v~gvDi~--~~~~~---~a~~n~~~~~~~~~v~~~~~D~~~~~~~--~~~~~ 119 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRT--KAKIVGVEIQ--ERLAD---MAKRSVAYNQLEDQIEIIEYDLKKITDL--IPKER 119 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTC--CCEEEEECCS--HHHHH---HHHHHHHHTTCTTTEEEECSCGGGGGGT--SCTTC
T ss_pred CCCEEEEcCCchhHHHHHHHHhc--CCcEEEEECC--HHHHH---HHHHHHHHCCCcccEEEEECcHHHhhhh--hccCC
Confidence 67899999999999999999874 2367666554 33332 3666766443222234456688776532 34578
Q ss_pred cceEEEcCCCCCC--CCCc--cchHHHHHh--HHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEE
Q 016441 103 FDRIIFNFPHAGF--YGKE--DNHLLIEMH--RSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLI 176 (389)
Q Consensus 103 FDrIIFNFPH~G~--~gkE--D~~r~Ir~n--r~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~ 176 (389)
||.||.|-|.... .+.. +..+.+..| ...+..|++.|..+|+++|.+.+.+. |...-.+..++++.|+...
T Consensus 120 fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~---~~~~~~~~~~l~~~~~~~~ 196 (259)
T 3lpm_A 120 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR---PERLLDIIDIMRKYRLEPK 196 (259)
T ss_dssp EEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC---TTTHHHHHHHHHHTTEEEE
T ss_pred ccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc---HHHHHHHHHHHHHCCCceE
Confidence 9999999986432 1111 111122212 24567899999999999999999653 3445567788888999888
Q ss_pred EEeeC
Q 016441 177 WCSEF 181 (389)
Q Consensus 177 ~~~~F 181 (389)
+..+.
T Consensus 197 ~~~~v 201 (259)
T 3lpm_A 197 RIQFV 201 (259)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77654
No 12
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.38 E-value=0.00063 Score=60.57 Aligned_cols=148 Identities=20% Similarity=0.291 Sum_probs=93.1
Q ss_pred ccccccCCCC-CCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCC
Q 016441 14 EEKWIKHYSS-NHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTM 92 (389)
Q Consensus 14 ~~K~~~~Yss-~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL 92 (389)
..+|...|.. ..+||=||=|.=.++..||+.+ ...+++|.-.+ .++.+ .|..|++...-.++.++ ..|+.++
T Consensus 28 ~~~~~~~f~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s--~~~l~---~a~~~~~~~~~~nv~~~-~~d~~~l 100 (213)
T 2fca_A 28 KGKWNTVFGNDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELF--KSVIV---TAVQKVKDSEAQNVKLL-NIDADTL 100 (213)
T ss_dssp TTCHHHHHTSCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSC--HHHHH---HHHHHHHHSCCSSEEEE-CCCGGGH
T ss_pred CCCHHHHcCCCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEec--hHHHH---HHHHHHHHcCCCCEEEE-eCCHHHH
Confidence 3466666654 6689999999999999999886 34677776544 33333 25556554322234444 4588775
Q ss_pred CCCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCC
Q 016441 93 ELHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSS 172 (389)
Q Consensus 93 ~~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aG 172 (389)
... +....||.|+.|||-.-.+... ...+.....|++.+..+|+++|.++++... ..|..|-++.+. ++|
T Consensus 101 ~~~--~~~~~~d~v~~~~~~p~~~~~~------~~~rl~~~~~l~~~~~~LkpgG~l~~~td~-~~~~~~~~~~~~-~~g 170 (213)
T 2fca_A 101 TDV--FEPGEVKRVYLNFSDPWPKKRH------EKRRLTYSHFLKKYEEVMGKGGSIHFKTDN-RGLFEYSLKSFS-EYG 170 (213)
T ss_dssp HHH--CCTTSCCEEEEESCCCCCSGGG------GGGSTTSHHHHHHHHHHHTTSCEEEEEESC-HHHHHHHHHHHH-HHT
T ss_pred Hhh--cCcCCcCEEEEECCCCCcCccc------cccccCcHHHHHHHHHHcCCCCEEEEEeCC-HHHHHHHHHHHH-HCC
Confidence 321 3346799999999854321110 012222478999999999999999987532 234555555554 457
Q ss_pred cEEEEE
Q 016441 173 LSLIWC 178 (389)
Q Consensus 173 L~L~~~ 178 (389)
+.+...
T Consensus 171 ~~~~~~ 176 (213)
T 2fca_A 171 LLLTYV 176 (213)
T ss_dssp CEEEEE
T ss_pred Cccccc
Confidence 876653
No 13
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.37 E-value=0.0029 Score=61.37 Aligned_cols=130 Identities=18% Similarity=0.142 Sum_probs=83.9
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCC-CCCCCCcCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATT-MELHPDLRTR 101 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATk-L~~~~~Lk~~ 101 (389)
+..+||=|| |+=.++..|++.. ....+++ .|-.+++.+ -|++|++.+.-..+.++.+ |+.+ |... ...
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~-~~~~v~~--vDi~~~~l~---~a~~~~~~~g~~~v~~~~~-D~~~~l~~~---~~~ 240 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSG-LPKRIAV--LDIDERLTK---FIEKAANEIGYEDIEIFTF-DLRKPLPDY---ALH 240 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHT-CCSEEEE--ECSCHHHHH---HHHHHHHHHTCCCEEEECC-CTTSCCCTT---TSS
T ss_pred CCCEEEEEC-CCCHHHHHHHHhC-CCCEEEE--EECCHHHHH---HHHHHHHHcCCCCEEEEEC-hhhhhchhh---ccC
Confidence 467999999 9999999998763 2245554 553233332 3677776653113555444 8877 5321 135
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeE-EEEecCCCCCCc---ccHHHHHh-hCCcEEE
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEV-HVSHKTTVPFSN---WNIKELAI-GSSLSLI 176 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeI-HVTLk~g~PY~s---WnIe~LAa-~aGL~L~ 176 (389)
.||.||.|-|.... . +..|+..|..+|+++|.+ .++... .+-+. +.+.++.+ +.|+.+.
T Consensus 241 ~fD~Vi~~~p~~~~--------------~-~~~~l~~~~~~LkpgG~~~~~~~~~-~~~~~~~~~~~~~~l~~~~g~~~~ 304 (373)
T 2qm3_A 241 KFDTFITDPPETLE--------------A-IRAFVGRGIATLKGPRCAGYFGITR-RESSLDKWREIQKLLLNEFNVVIT 304 (373)
T ss_dssp CBSEEEECCCSSHH--------------H-HHHHHHHHHHTBCSTTCEEEEEECT-TTCCHHHHHHHHHHHHHTSCCEEE
T ss_pred CccEEEECCCCchH--------------H-HHHHHHHHHHHcccCCeEEEEEEec-CcCCHHHHHHHHHHHHHhcCcchh
Confidence 79999999884321 1 378999999999999954 555554 12233 56677777 8888776
Q ss_pred EEe
Q 016441 177 WCS 179 (389)
Q Consensus 177 ~~~ 179 (389)
...
T Consensus 305 ~~~ 307 (373)
T 2qm3_A 305 DII 307 (373)
T ss_dssp EEE
T ss_pred hhh
Confidence 543
No 14
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=97.36 E-value=0.0029 Score=57.56 Aligned_cols=129 Identities=16% Similarity=0.157 Sum_probs=86.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC----CEEEeccccCCCCCCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG----TCILHGVDATTMELHPD 97 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G----v~VlfgVDATkL~~~~~ 97 (389)
.+..+||=||=|.=.++..|++.++ ..+++...+ . +..+ .+..++ ++.| +.+ ...|+.++.
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s-~-~~~~---~a~~~~---~~~~~~~~~~~-~~~d~~~~~---- 127 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLS-K-NQAN---HVQQLV---ANSENLRSKRV-LLAGWEQFD---- 127 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESC-H-HHHH---HHHHHH---HTCCCCSCEEE-EESCGGGCC----
T ss_pred CCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECC-H-HHHH---HHHHHH---HhcCCCCCeEE-EECChhhCC----
Confidence 4677999999999999999998775 366666554 2 2222 133333 3333 333 344776543
Q ss_pred cCCCCcceEEEcC--CCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC----------CC-------
Q 016441 98 LRTRKFDRIIFNF--PHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT----------VP------- 158 (389)
Q Consensus 98 Lk~~~FDrIIFNF--PH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g----------~P------- 158 (389)
..||.|+.+. -|++. ++ ...+|+.+..+|+|+|.+.|+-... .|
T Consensus 128 ---~~fD~v~~~~~l~~~~~---~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (287)
T 1kpg_A 128 ---EPVDRIVSIGAFEHFGH---ER-----------YDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFAR 190 (287)
T ss_dssp ---CCCSEEEEESCGGGTCT---TT-----------HHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHH
T ss_pred ---CCeeEEEEeCchhhcCh---HH-----------HHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccc
Confidence 6799999884 46642 11 4578899999999999998875431 11
Q ss_pred ---------------CCcccHHHHHhhCCcEEEEEeeCC
Q 016441 159 ---------------FSNWNIKELAIGSSLSLIWCSEFK 182 (389)
Q Consensus 159 ---------------Y~sWnIe~LAa~aGL~L~~~~~F~ 182 (389)
++.-.+.++.+++||.+++...+.
T Consensus 191 ~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 229 (287)
T 1kpg_A 191 FLKFIVTEIFPGGRLPSIPMVQECASANGFTVTRVQSLQ 229 (287)
T ss_dssp HHHHHHHHTSTTCCCCCHHHHHHHHHTTTCEEEEEEECH
T ss_pred hhhhHHheeCCCCCCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 133456778889999999887654
No 15
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.34 E-value=0.00061 Score=59.16 Aligned_cols=139 Identities=14% Similarity=0.098 Sum_probs=93.5
Q ss_pred ccccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC
Q 016441 16 KWIKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH 95 (389)
Q Consensus 16 K~~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~ 95 (389)
..+....+..+||=||=|.=.++..|++. +..+++.-.+ .++.+. ++.++ ++.+. ..|+.++.
T Consensus 36 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s--~~~~~~---a~~~~------~~~~~-~~d~~~~~-- 98 (211)
T 3e23_A 36 KFLGELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGS--PELAAE---ASRRL------GRPVR-TMLFHQLD-- 98 (211)
T ss_dssp HHHTTSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESC--HHHHHH---HHHHH------TSCCE-ECCGGGCC--
T ss_pred HHHHhcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCC--HHHHHH---HHHhc------CCceE-EeeeccCC--
Confidence 34555667889999999999999999976 3456655443 333321 33333 44433 35666665
Q ss_pred CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCC------------CCccc
Q 016441 96 PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVP------------FSNWN 163 (389)
Q Consensus 96 ~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P------------Y~sWn 163 (389)
....||.|+.++.-.-. ..+-+..+++.+..+|+++|.+.++...+.+ ++.-.
T Consensus 99 ---~~~~fD~v~~~~~l~~~------------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (211)
T 3e23_A 99 ---AIDAYDAVWAHACLLHV------------PRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEW 163 (211)
T ss_dssp ---CCSCEEEEEECSCGGGS------------CHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHH
T ss_pred ---CCCcEEEEEecCchhhc------------CHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHH
Confidence 34789999998632211 1123567899999999999999999876542 34456
Q ss_pred HHHHHhhCC-cEEEEEeeCCCCCC
Q 016441 164 IKELAIGSS-LSLIWCSEFKIEDY 186 (389)
Q Consensus 164 Ie~LAa~aG-L~L~~~~~F~~~~Y 186 (389)
+.++.+++| |.+++........|
T Consensus 164 ~~~~l~~aG~f~~~~~~~~~~~~~ 187 (211)
T 3e23_A 164 LRARYAEAGTWASVAVESSEGKGF 187 (211)
T ss_dssp HHHHHHHHCCCSEEEEEEEEEECT
T ss_pred HHHHHHhCCCcEEEEEEeccCCCC
Confidence 788899999 99998776554433
No 16
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=97.34 E-value=0.0035 Score=57.85 Aligned_cols=141 Identities=12% Similarity=0.042 Sum_probs=90.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||=||=|.=.++..|++.++ ..+++.-++ .+.+ + .+++++....-.+-.-+...|+.++ ..
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s-~~~~-~---~a~~~~~~~~~~~~v~~~~~d~~~~-------~~ 136 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLS-ENQY-A---HDKAMFDEVDSPRRKEVRIQGWEEF-------DE 136 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECC-HHHH-H---HHHHHHHHSCCSSCEEEEECCGGGC-------CC
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECC-HHHH-H---HHHHHHHhcCCCCceEEEECCHHHc-------CC
Confidence 5678999999999999999999885 567766554 2222 2 2444443321111122344577765 46
Q ss_pred CcceEEEcCC--CCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCC---------------------
Q 016441 102 KFDRIIFNFP--HAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVP--------------------- 158 (389)
Q Consensus 102 ~FDrIIFNFP--H~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P--------------------- 158 (389)
.||.|+.+.. |+... ++. ...+-+..+|+.+..+|+|+|.+.|.-.....
T Consensus 137 ~fD~v~~~~~~~~~~d~--~~~-----~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (302)
T 3hem_A 137 PVDRIVSLGAFEHFADG--AGD-----AGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKF 209 (302)
T ss_dssp CCSEEEEESCGGGTTCC--SSC-----CCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHH
T ss_pred CccEEEEcchHHhcCcc--ccc-----cchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHH
Confidence 7999999754 55211 000 00122568999999999999999887653211
Q ss_pred -----------CCcccHHHHHhhCCcEEEEEeeCCC
Q 016441 159 -----------FSNWNIKELAIGSSLSLIWCSEFKI 183 (389)
Q Consensus 159 -----------Y~sWnIe~LAa~aGL~L~~~~~F~~ 183 (389)
.+.-.+.++++++||.+++...+..
T Consensus 210 ~~~~~~p~~~~~s~~~~~~~l~~aGf~~~~~~~~~~ 245 (302)
T 3hem_A 210 ILTEIFPGGRLPRISQVDYYSSNAGWKVERYHRIGA 245 (302)
T ss_dssp HHHHTCTTCCCCCHHHHHHHHHHHTCEEEEEEECGG
T ss_pred HHHhcCCCCCCCCHHHHHHHHHhCCcEEEEEEeCch
Confidence 1112567788899999998877654
No 17
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.30 E-value=0.0019 Score=55.48 Aligned_cols=138 Identities=14% Similarity=0.123 Sum_probs=87.1
Q ss_pred ccccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC
Q 016441 16 KWIKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH 95 (389)
Q Consensus 16 K~~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~ 95 (389)
+++....++ +||=||=|.=.++..|++. +.++++.-.+ +++.+ .++.++.... .++.+ ...|+.++.
T Consensus 23 ~~~~~~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s--~~~~~---~a~~~~~~~~-~~~~~-~~~d~~~~~-- 89 (202)
T 2kw5_A 23 SVANQIPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQS--SVGLA---KAKQLAQEKG-VKITT-VQSNLADFD-- 89 (202)
T ss_dssp HHHHHSCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSS--HHHHH---HHHHHHHHHT-CCEEE-ECCBTTTBS--
T ss_pred HHHHhCCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECC--HHHHH---HHHHHHHhcC-CceEE-EEcChhhcC--
Confidence 344455666 9999999999999999875 3466665443 33332 2444443321 13333 345777653
Q ss_pred CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC--------CC---CCccc-
Q 016441 96 PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT--------VP---FSNWN- 163 (389)
Q Consensus 96 ~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g--------~P---Y~sWn- 163 (389)
+....||.|+.++.|... .-...+++.+..+|+++|.+.++.... .| ...+.
T Consensus 90 --~~~~~fD~v~~~~~~~~~--------------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (202)
T 2kw5_A 90 --IVADAWEGIVSIFCHLPS--------------SLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKL 153 (202)
T ss_dssp --CCTTTCSEEEEECCCCCH--------------HHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCH
T ss_pred --CCcCCccEEEEEhhcCCH--------------HHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCH
Confidence 345789999999887631 124578889999999999999986432 22 12333
Q ss_pred --HHHHHhhCCcEEEEEeeCCCC
Q 016441 164 --IKELAIGSSLSLIWCSEFKIE 184 (389)
Q Consensus 164 --Ie~LAa~aGL~L~~~~~F~~~ 184 (389)
+.++.+ ||.++....+...
T Consensus 154 ~~l~~~l~--Gf~v~~~~~~~~~ 174 (202)
T 2kw5_A 154 ETLQSELP--SLNWLIANNLERN 174 (202)
T ss_dssp HHHHHHCS--SSCEEEEEEEEEE
T ss_pred HHHHHHhc--CceEEEEEEEEee
Confidence 344444 8888877666544
No 18
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.27 E-value=0.00049 Score=65.26 Aligned_cols=144 Identities=11% Similarity=0.197 Sum_probs=89.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH----hCCCEEEeccccCCCCCCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLK----KLGTCILHGVDATTMELHPD 97 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr----~~Gv~VlfgVDATkL~~~~~ 97 (389)
.+..+||.||=|+=.++..|++.. ....|++.-.|. ++.+ -+++++..+. ...++++. -|+.++...
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~--~~i~---~a~~~~~~~~~~~~~~~v~~~~-~D~~~~~~~-- 164 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDG--EVME---QSKQHFPQISRSLADPRATVRV-GDGLAFVRQ-- 164 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCH--HHHH---HHHHHCHHHHGGGGCTTEEEEE-SCHHHHHHS--
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCH--HHHH---HHHHHhHHhhcccCCCcEEEEE-CcHHHHHHh--
Confidence 456799999999999999999764 345777776663 2222 1444554432 23355544 366654211
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHH-HHHHHhhHhcccCCCeEEEEecCCCCC----CcccHHHHHhhCC
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLV-RDFFRNSSGMLRDGGEVHVSHKTTVPF----SNWNIKELAIGSS 172 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL-~~FF~SA~~lL~~~GeIHVTLk~g~PY----~sWnIe~LAa~aG 172 (389)
....+||.||.|.|..-. . ...|. ..||+.+..+|+++|.+.+..- .|+ ..+.+.+..+++|
T Consensus 165 ~~~~~fDvIi~d~~~~~~--~---------~~~l~~~~~l~~~~~~LkpgG~lv~~~~--~~~~~~~~~~~~~~~l~~~G 231 (304)
T 3bwc_A 165 TPDNTYDVVIIDTTDPAG--P---------ASKLFGEAFYKDVLRILKPDGICCNQGE--SIWLDLELIEKMSRFIRETG 231 (304)
T ss_dssp SCTTCEEEEEEECC--------------------CCHHHHHHHHHHEEEEEEEEEEEC--CTTTCHHHHHHHHHHHHHHT
T ss_pred ccCCceeEEEECCCCccc--c---------chhhhHHHHHHHHHHhcCCCcEEEEecC--CcccchHHHHHHHHHHHhCC
Confidence 124679999999876431 1 11222 6899999999999999988743 232 3467777788889
Q ss_pred cEEEEEeeCCCCCCC
Q 016441 173 LSLIWCSEFKIEDYP 187 (389)
Q Consensus 173 L~L~~~~~F~~~~YP 187 (389)
|..++........||
T Consensus 232 F~~v~~~~~~vP~yp 246 (304)
T 3bwc_A 232 FASVQYALMHVPTYP 246 (304)
T ss_dssp CSEEEEEECCCTTST
T ss_pred CCcEEEEEeeccccc
Confidence 877766554433343
No 19
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.25 E-value=0.002 Score=57.29 Aligned_cols=130 Identities=14% Similarity=0.146 Sum_probs=87.8
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH-HhCCCEEEeccccCCCCCCCCcC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNL-KKLGTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~L-r~~Gv~VlfgVDATkL~~~~~Lk 99 (389)
..+..+||-+|=|.=.++..|++.++....+++.-.+ ++..+ .+++|++.. ....+.+ ...|+.++. +.
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~--~~~~~---~a~~~~~~~~g~~~v~~-~~~d~~~~~----~~ 163 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEAR--PHHLA---QAERNVRAFWQVENVRF-HLGKLEEAE----LE 163 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESC--HHHHH---HHHHHHHHHCCCCCEEE-EESCGGGCC----CC
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCC--HHHHH---HHHHHHHHhcCCCCEEE-EECchhhcC----CC
Confidence 4567899999999999999999987655677766543 33332 255666544 3122343 345777652 33
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEEe
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWCS 179 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~ 179 (389)
...||.|+.|.|.. ..+++.+..+|+++|.+.+...... ..+.+.+..+++|+..++..
T Consensus 164 ~~~~D~v~~~~~~~-------------------~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~l~~~gf~~~~~~ 222 (258)
T 2pwy_A 164 EAAYDGVALDLMEP-------------------WKVLEKAALALKPDRFLVAYLPNIT--QVLELVRAAEAHPFRLERVL 222 (258)
T ss_dssp TTCEEEEEEESSCG-------------------GGGHHHHHHHEEEEEEEEEEESCHH--HHHHHHHHHTTTTEEEEEEE
T ss_pred CCCcCEEEECCcCH-------------------HHHHHHHHHhCCCCCEEEEEeCCHH--HHHHHHHHHHHCCCceEEEE
Confidence 46799999987643 1578889999999999998775432 23455556667898877665
Q ss_pred eC
Q 016441 180 EF 181 (389)
Q Consensus 180 ~F 181 (389)
..
T Consensus 223 ~~ 224 (258)
T 2pwy_A 223 EV 224 (258)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 20
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.25 E-value=0.0014 Score=60.27 Aligned_cols=140 Identities=19% Similarity=0.115 Sum_probs=90.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||=||=|.=.++.+|++.++ ..+++|+-.+ +...+ .++.|++.+.-..+.++ .-|+.+. +...
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s--~~~l~---~a~~n~~~~~~~~v~~~-~~d~~~~-----~~~~ 175 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERP-DCEIIAVDRM--PDAVS---LAQRNAQHLAIKNIHIL-QSDWFSA-----LAGQ 175 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECSS--HHHHH---HHHHHHHHHTCCSEEEE-CCSTTGG-----GTTC
T ss_pred cCCCEEEEecCCccHHHHHHHHhCC-CCEEEEEECC--HHHHH---HHHHHHHHcCCCceEEE-Ecchhhh-----cccC
Confidence 4567999999999999999998763 4567766444 33332 36677766542234443 3466542 2246
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHh------------HHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHh
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMH------------RSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAI 169 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~n------------r~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa 169 (389)
.||.|+.|.|-.+. +...-...+..+ -..+..++..+..+|+++|.+.+.... .....+.++.+
T Consensus 176 ~fD~Iv~npPy~~~-~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~~~~~l~ 251 (276)
T 2b3t_A 176 QFAMIVSNPPYIDE-QDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW---QQGEAVRQAFI 251 (276)
T ss_dssp CEEEEEECCCCBCT-TCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS---SCHHHHHHHHH
T ss_pred CccEEEECCCCCCc-cccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc---hHHHHHHHHHH
Confidence 79999999998874 111000001111 145688999999999999999987532 34456778888
Q ss_pred hCCcEEEE
Q 016441 170 GSSLSLIW 177 (389)
Q Consensus 170 ~aGL~L~~ 177 (389)
++|+..++
T Consensus 252 ~~Gf~~v~ 259 (276)
T 2b3t_A 252 LAGYHDVE 259 (276)
T ss_dssp HTTCTTCC
T ss_pred HCCCcEEE
Confidence 88886544
No 21
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.25 E-value=0.00082 Score=62.58 Aligned_cols=127 Identities=13% Similarity=0.075 Sum_probs=85.6
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
..++.+||=+|=|.=.||..+|+... ..++| .|...+..+ .++.|++...-.+..-...-|+.++.. .
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~--~~V~~--vD~s~~~~~---~a~~n~~~n~~~~~v~~~~~D~~~~~~-----~ 190 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGK--AKVIA--IEKDPYTFK---FLVENIHLNKVEDRMSAYNMDNRDFPG-----E 190 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTC--CEEEE--ECCCHHHHH---HHHHHHHHTTCTTTEEEECSCTTTCCC-----C
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCC--CEEEE--EECCHHHHH---HHHHHHHHcCCCceEEEEECCHHHhcc-----c
Confidence 34588999999888889999988642 24555 453333333 366666543222223356678887654 5
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC--C--CCcccHHHHHhhCCcEEE
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV--P--FSNWNIKELAIGSSLSLI 176 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~--P--Y~sWnIe~LAa~aGL~L~ 176 (389)
..||.|+.|.|... ..|+..+..+|+++|.+++..+... . -..-.+.+.++++|+.+.
T Consensus 191 ~~fD~Vi~~~p~~~------------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~ 252 (278)
T 2frn_A 191 NIADRILMGYVVRT------------------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVE 252 (278)
T ss_dssp SCEEEEEECCCSSG------------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEE
T ss_pred CCccEEEECCchhH------------------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeE
Confidence 78999999998321 3577788899999999999877531 1 122456778889999876
Q ss_pred E
Q 016441 177 W 177 (389)
Q Consensus 177 ~ 177 (389)
.
T Consensus 253 ~ 253 (278)
T 2frn_A 253 K 253 (278)
T ss_dssp E
T ss_pred E
Confidence 6
No 22
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.23 E-value=0.00053 Score=56.13 Aligned_cols=120 Identities=16% Similarity=0.114 Sum_probs=80.4
Q ss_pred ccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC--
Q 016441 18 IKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH-- 95 (389)
Q Consensus 18 ~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~-- 95 (389)
..+..+..+||=||-|.=.++..|++.++....+++.-.+. +.+ . .++.+. ..|+.++...
T Consensus 17 ~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~---~~~-~------------~~~~~~-~~d~~~~~~~~~ 79 (180)
T 1ej0_A 17 DKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP---MDP-I------------VGVDFL-QGDFRDELVMKA 79 (180)
T ss_dssp HCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC---CCC-C------------TTEEEE-ESCTTSHHHHHH
T ss_pred hCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc---ccc-c------------CcEEEE-Ecccccchhhhh
Confidence 33456778999999999999999999876556888877665 111 0 334443 4477664200
Q ss_pred --CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC
Q 016441 96 --PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV 157 (389)
Q Consensus 96 --~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 157 (389)
..+....||.|+.|.|--.. +.. ......+..+...+++.+..+|+++|.+.++.....
T Consensus 80 ~~~~~~~~~~D~i~~~~~~~~~-~~~--~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 80 LLERVGDSKVQVVMSDMAPNMS-GTP--AVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp HHHHHTTCCEEEEEECCCCCCC-SCH--HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred hhccCCCCceeEEEECCCcccc-CCC--ccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 00334689999999884332 111 112234456678999999999999999999877654
No 23
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=97.22 E-value=0.0047 Score=54.23 Aligned_cols=132 Identities=14% Similarity=0.145 Sum_probs=88.5
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
..+..+||=||=|.=.++..|++. +..+++.-.+ .++.+. +..+. ...++. ....|+.++. +..
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s--~~~~~~---a~~~~---~~~~~~-~~~~d~~~~~----~~~ 114 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDIS--EVMIQK---GKERG---EGPDLS-FIKGDLSSLP----FEN 114 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESC--HHHHHH---HHTTT---CBTTEE-EEECBTTBCS----SCT
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECC--HHHHHH---HHhhc---ccCCce-EEEcchhcCC----CCC
Confidence 346789999999999999999986 3467665443 222221 22221 122333 3456777753 345
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC-------------------CCCc
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV-------------------PFSN 161 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~-------------------PY~s 161 (389)
..||.|+.+...--. .+ ...+++.+..+|+++|.+.|+..... .++.
T Consensus 115 ~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (242)
T 3l8d_A 115 EQFEAIMAINSLEWT---EE-----------PLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMP 180 (242)
T ss_dssp TCEEEEEEESCTTSS---SC-----------HHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCH
T ss_pred CCccEEEEcChHhhc---cC-----------HHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCH
Confidence 789999987543321 12 23678899999999999999874321 1455
Q ss_pred ccHHHHHhhCCcEEEEEeeCC
Q 016441 162 WNIKELAIGSSLSLIWCSEFK 182 (389)
Q Consensus 162 WnIe~LAa~aGL~L~~~~~F~ 182 (389)
+.++++.+++||.+++...+-
T Consensus 181 ~~~~~~l~~~Gf~~~~~~~~~ 201 (242)
T 3l8d_A 181 WEFEQLVKEQGFKVVDGIGVY 201 (242)
T ss_dssp HHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHHcCCEEEEeeccc
Confidence 679999999999999987663
No 24
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.22 E-value=0.0027 Score=63.42 Aligned_cols=148 Identities=15% Similarity=0.145 Sum_probs=97.3
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
-.++.+||=+|=|.=.++..|++..+....|+|.-.+. ...+ .+..|++.+.-.++.+ ...|++++... +..
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~--~~l~---~~~~~~~~~g~~~v~~-~~~D~~~~~~~--~~~ 328 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDK--MRMK---RLKDFVKRMGIKIVKP-LVKDARKAPEI--IGE 328 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCH--HHHH---HHHHHHHHTTCCSEEE-ECSCTTCCSSS--SCS
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCH--HHHH---HHHHHHHHcCCCcEEE-EEcChhhcchh--hcc
Confidence 35678999999999999999998875435677765542 2222 3556665443223333 45688876532 344
Q ss_pred CCcceEEEcCCCCCCCCC----cc-----chHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcc-cHHH-HHh
Q 016441 101 RKFDRIIFNFPHAGFYGK----ED-----NHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNW-NIKE-LAI 169 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gk----ED-----~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sW-nIe~-LAa 169 (389)
..||+|+.|-|..|. |. .| ....+.....+-..++..+..+|++||.+.++-|+-.|-..- .|.. +.+
T Consensus 329 ~~fD~Vl~D~Pcsg~-g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~ 407 (450)
T 2yxl_A 329 EVADKVLLDAPCTSS-GTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNV 407 (450)
T ss_dssp SCEEEEEEECCCCCG-GGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred CCCCEEEEcCCCCCC-eeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHh
Confidence 679999999999884 21 11 011233444555788999999999999999999987775544 4445 444
Q ss_pred hCCcEEEE
Q 016441 170 GSSLSLIW 177 (389)
Q Consensus 170 ~aGL~L~~ 177 (389)
..++.+..
T Consensus 408 ~~~~~~~~ 415 (450)
T 2yxl_A 408 HPEFKLVP 415 (450)
T ss_dssp CSSCEECC
T ss_pred CCCCEEee
Confidence 45777654
No 25
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.17 E-value=0.0055 Score=53.11 Aligned_cols=108 Identities=17% Similarity=0.223 Sum_probs=72.4
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcC
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk 99 (389)
......+||=||=|.=.++..|++.. ..++++-.+ +++.+ .++.+++... ..+.++. .|+.++. +.
T Consensus 35 ~~~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s--~~~~~---~a~~~~~~~~-~~~~~~~-~d~~~~~----~~ 100 (227)
T 1ve3_A 35 YMKKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDIS--EDMIR---KAREYAKSRE-SNVEFIV-GDARKLS----FE 100 (227)
T ss_dssp SCCSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESC--HHHHH---HHHHHHHHTT-CCCEEEE-CCTTSCC----SC
T ss_pred hcCCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECC--HHHHH---HHHHHHHhcC-CCceEEE-CchhcCC----CC
Confidence 34457899999999999999998863 266666554 33333 2445544332 3455543 4776653 34
Q ss_pred CCCcceEEEcCC--CCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC
Q 016441 100 TRKFDRIIFNFP--HAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT 155 (389)
Q Consensus 100 ~~~FDrIIFNFP--H~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 155 (389)
...||.|+.+.| +... .-...+++.+..+|+++|.+.+...+
T Consensus 101 ~~~~D~v~~~~~~~~~~~--------------~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 101 DKTFDYVIFIDSIVHFEP--------------LELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp TTCEEEEEEESCGGGCCH--------------HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCcEEEEEEcCchHhCCH--------------HHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 568999999988 4321 11357889999999999999887653
No 26
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.16 E-value=0.0019 Score=64.20 Aligned_cols=143 Identities=16% Similarity=0.088 Sum_probs=93.9
Q ss_pred cccccCCCC-CCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCC
Q 016441 15 EKWIKHYSS-NHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTME 93 (389)
Q Consensus 15 ~K~~~~Yss-~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~ 93 (389)
.+++..+.+ +.+||=+|=|.=.||+.+|+. | .. .|+.|..+...+ .+++|++... ....+. .-|+.++-
T Consensus 205 r~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~-g--a~--V~avDis~~al~---~a~~n~~~ng-~~~~~~-~~D~~~~l 274 (393)
T 4dmg_A 205 RRLFEAMVRPGERVLDVYSYVGGFALRAARK-G--AY--ALAVDKDLEALG---VLDQAALRLG-LRVDIR-HGEALPTL 274 (393)
T ss_dssp HHHHHTTCCTTCEEEEESCTTTHHHHHHHHT-T--CE--EEEEESCHHHHH---HHHHHHHHHT-CCCEEE-ESCHHHHH
T ss_pred HHHHHHHhcCCCeEEEcccchhHHHHHHHHc-C--Ce--EEEEECCHHHHH---HHHHHHHHhC-CCCcEE-EccHHHHH
Confidence 456666766 889999999999999999885 3 34 455664444433 3677776442 223444 55666532
Q ss_pred CCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCC-cc--cHHHHHhh
Q 016441 94 LHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFS-NW--NIKELAIG 170 (389)
Q Consensus 94 ~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~-sW--nIe~LAa~ 170 (389)
.. +... ||.||.|-|.... ++. .+..-......++..|..+|+++|.+.+..|...+.. .| .|.+.+.+
T Consensus 275 ~~--~~~~-fD~Ii~dpP~f~~-~~~----~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~ 346 (393)
T 4dmg_A 275 RG--LEGP-FHHVLLDPPTLVK-RPE----ELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAAD 346 (393)
T ss_dssp HT--CCCC-EEEEEECCCCCCS-SGG----GHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HH--hcCC-CCEEEECCCcCCC-CHH----HHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 11 1334 9999999998663 333 3444555667888999999999999998888876532 22 34456666
Q ss_pred CCcEE
Q 016441 171 SSLSL 175 (389)
Q Consensus 171 aGL~L 175 (389)
+|..+
T Consensus 347 ~g~~~ 351 (393)
T 4dmg_A 347 LGRRL 351 (393)
T ss_dssp HTCCE
T ss_pred hCCeE
Confidence 66443
No 27
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.14 E-value=0.0051 Score=52.86 Aligned_cols=128 Identities=13% Similarity=0.117 Sum_probs=88.6
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCCc
Q 016441 24 NHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRKF 103 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~F 103 (389)
..+||=||=|.=.++..|++. +..+++.-.+ .++.+. +..+ ..++.++ ..|+.++. +....|
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s--~~~~~~---a~~~-----~~~~~~~-~~d~~~~~----~~~~~f 103 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPA--TRLVEL---ARQT-----HPSVTFH-HGTITDLS----DSPKRW 103 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCC--HHHHHH---HHHH-----CTTSEEE-CCCGGGGG----GSCCCE
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCC--HHHHHH---HHHh-----CCCCeEE-eCcccccc----cCCCCe
Confidence 789999999999999999986 3467665443 333221 2222 1244443 45776653 345789
Q ss_pred ceEEEcCC--CCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCC-------------CCcccHHHHH
Q 016441 104 DRIIFNFP--HAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVP-------------FSNWNIKELA 168 (389)
Q Consensus 104 DrIIFNFP--H~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P-------------Y~sWnIe~LA 168 (389)
|.|+.++. |+. .++ +..+++.+..+|+++|.+.++...... ++.-.+.++.
T Consensus 104 D~v~~~~~l~~~~---~~~-----------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 169 (203)
T 3h2b_A 104 AGLLAWYSLIHMG---PGE-----------LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQAL 169 (203)
T ss_dssp EEEEEESSSTTCC---TTT-----------HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHH
T ss_pred EEEEehhhHhcCC---HHH-----------HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHH
Confidence 99999653 332 122 457888999999999999999876542 3445677789
Q ss_pred hhCCcEEEEEeeCCC
Q 016441 169 IGSSLSLIWCSEFKI 183 (389)
Q Consensus 169 a~aGL~L~~~~~F~~ 183 (389)
+++||.+++...+..
T Consensus 170 ~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 170 ETAGFQVTSSHWDPR 184 (203)
T ss_dssp HHTTEEEEEEEECTT
T ss_pred HHCCCcEEEEEecCC
Confidence 999999999887765
No 28
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=97.14 E-value=0.0048 Score=57.47 Aligned_cols=147 Identities=12% Similarity=0.084 Sum_probs=96.3
Q ss_pred ccccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC
Q 016441 16 KWIKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH 95 (389)
Q Consensus 16 K~~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~ 95 (389)
+++....+..+||=||=|.=.++..|++.++ ..+++.-.+ ++..+ .++++++...-.+-.-+..-|+.++.
T Consensus 110 ~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s--~~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~~-- 180 (312)
T 3vc1_A 110 DHLGQAGPDDTLVDAGCGRGGSMVMAHRRFG--SRVEGVTLS--AAQAD---FGNRRARELRIDDHVRSRVCNMLDTP-- 180 (312)
T ss_dssp TTSCCCCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESC--HHHHH---HHHHHHHHTTCTTTEEEEECCTTSCC--
T ss_pred HHhccCCCCCEEEEecCCCCHHHHHHHHHcC--CEEEEEeCC--HHHHH---HHHHHHHHcCCCCceEEEECChhcCC--
Confidence 3444456788999999999999999998873 456655443 33332 25555544321112334455777654
Q ss_pred CCcCCCCcceEEEcCC--CCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC-CCC--------------
Q 016441 96 PDLRTRKFDRIIFNFP--HAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT-TVP-------------- 158 (389)
Q Consensus 96 ~~Lk~~~FDrIIFNFP--H~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~-g~P-------------- 158 (389)
+....||.|+.+.- |++ ...+|+.+..+|+|||.+.++-.. ...
T Consensus 181 --~~~~~fD~V~~~~~l~~~~-----------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 241 (312)
T 3vc1_A 181 --FDKGAVTASWNNESTMYVD-----------------LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAH 241 (312)
T ss_dssp --CCTTCEEEEEEESCGGGSC-----------------HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHH
T ss_pred --CCCCCEeEEEECCchhhCC-----------------HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhh
Confidence 34578999998744 321 568899999999999998876532 111
Q ss_pred -----CCcccHHHHHhhCCcEEEEEeeCCCCCCCCCc
Q 016441 159 -----FSNWNIKELAIGSSLSLIWCSEFKIEDYPAYN 190 (389)
Q Consensus 159 -----Y~sWnIe~LAa~aGL~L~~~~~F~~~~YPGY~ 190 (389)
++.-.+.++.+++||.+++...+.....|.+.
T Consensus 242 ~~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~~~~~w~ 278 (312)
T 3vc1_A 242 FECNIHSRREYLRAMADNRLVPHTIVDLTPDTLPYWE 278 (312)
T ss_dssp HTCCCCBHHHHHHHHHTTTEEEEEEEECHHHHHHHHH
T ss_pred hcCCCCCHHHHHHHHHHCCCEEEEEEeCCHHHHHHHH
Confidence 12234567888999999999988755444443
No 29
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=97.12 E-value=0.014 Score=52.36 Aligned_cols=140 Identities=16% Similarity=0.114 Sum_probs=89.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeccccCCCCCCCCcCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL-GTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~-Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
.+..+||=||=|.=.++..|++.+ +.++++.-.+. + ..+ .++.++....-. .+. +...|+.++. +..
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~-~-~~~---~a~~~~~~~~~~~~~~-~~~~d~~~~~----~~~ 127 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISR-P-QVN---QANARATAAGLANRVT-FSYADAMDLP----FED 127 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCH-H-HHH---HHHHHHHHTTCTTTEE-EEECCTTSCC----SCT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCH-H-HHH---HHHHHHHhcCCCcceE-EEECccccCC----CCC
Confidence 567899999999999999999876 35677665542 2 222 133333322111 133 3445777753 345
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC----------------------CC
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT----------------------VP 158 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g----------------------~P 158 (389)
..||.|+.+..---. .+ ...+|+.+..+|+|+|.+.|+-... ..
T Consensus 128 ~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (273)
T 3bus_A 128 ASFDAVWALESLHHM---PD-----------RGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSL 193 (273)
T ss_dssp TCEEEEEEESCTTTS---SC-----------HHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCC
T ss_pred CCccEEEEechhhhC---CC-----------HHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCC
Confidence 789999987543221 11 1478899999999999998875321 11
Q ss_pred CCcccHHHHHhhCCcEEEEEeeCCCCCCC
Q 016441 159 FSNWNIKELAIGSSLSLIWCSEFKIEDYP 187 (389)
Q Consensus 159 Y~sWnIe~LAa~aGL~L~~~~~F~~~~YP 187 (389)
++.-.+.++.+++||.+++...+.....+
T Consensus 194 ~~~~~~~~~l~~aGf~~~~~~~~~~~~~~ 222 (273)
T 3bus_A 194 GGIDEYESDVRQAELVVTSTVDISAQARP 222 (273)
T ss_dssp CCHHHHHHHHHHTTCEEEEEEECHHHHTT
T ss_pred CCHHHHHHHHHHcCCeEEEEEECcHhHHH
Confidence 22345677888999999988877644333
No 30
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=97.05 E-value=0.0018 Score=61.93 Aligned_cols=127 Identities=15% Similarity=0.130 Sum_probs=85.2
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcC
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk 99 (389)
...++.+||=+|=|-=.||..+|+. | +..|+|.-.+. +.+ .-+++|++..+=.+....+.-||.++..
T Consensus 122 ~~~~g~~VlD~~aG~G~~~i~~a~~-g-~~~V~avD~np-~a~----~~~~~N~~~N~v~~~v~~~~~D~~~~~~----- 189 (278)
T 3k6r_A 122 VAKPDELVVDMFAGIGHLSLPIAVY-G-KAKVIAIEKDP-YTF----KFLVENIHLNKVEDRMSAYNMDNRDFPG----- 189 (278)
T ss_dssp HCCTTCEEEETTCTTTTTTHHHHHH-T-CCEEEEECCCH-HHH----HHHHHHHHHTTCTTTEEEECSCTTTCCC-----
T ss_pred hcCCCCEEEEecCcCcHHHHHHHHh-c-CCeEEEEECCH-HHH----HHHHHHHHHcCCCCcEEEEeCcHHHhcc-----
Confidence 3567889998888877888877775 3 45687766653 222 2467787655434445567789987643
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC-CCCCccc---HHHHHhhCCcEE
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT-VPFSNWN---IKELAIGSSLSL 175 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g-~PY~sWn---Ie~LAa~aGL~L 175 (389)
...||+||.|-|+... .|+..|..+|++||-||+-.... .-...|. ++++|++.|+.+
T Consensus 190 ~~~~D~Vi~~~p~~~~------------------~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v 251 (278)
T 3k6r_A 190 ENIADRILMGYVVRTH------------------EFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDV 251 (278)
T ss_dssp CSCEEEEEECCCSSGG------------------GGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEECCCCcHH------------------HHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcE
Confidence 4679999999997641 47778889999999998743321 1122343 455788888765
Q ss_pred E
Q 016441 176 I 176 (389)
Q Consensus 176 ~ 176 (389)
.
T Consensus 252 ~ 252 (278)
T 3k6r_A 252 E 252 (278)
T ss_dssp E
T ss_pred E
Confidence 3
No 31
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.05 E-value=0.0042 Score=58.06 Aligned_cols=139 Identities=14% Similarity=0.082 Sum_probs=94.5
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcC
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk 99 (389)
+..++++||=+|=|.=.|+..||+..|..-.|+|- |-.+++.+ .+.++ .++.+-.+..-.|+........ .
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~av--D~s~~~~~---~l~~~---a~~~~ni~~V~~d~~~p~~~~~-~ 144 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGV--EFAPRVMR---DLLTV---VRDRRNIFPILGDARFPEKYRH-L 144 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEE--ECCHHHHH---HHHHH---STTCTTEEEEESCTTCGGGGTT-T
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEE--eCCHHHHH---HHHHh---hHhhcCeeEEEEeccCcccccc-c
Confidence 45778999999999999999999998866677774 43333333 13333 2333322333347776655432 3
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC------CC-CcccHHHHHhhCC
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV------PF-SNWNIKELAIGSS 172 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~------PY-~sWnIe~LAa~aG 172 (389)
...+|.|+-++||... ...++.+|..+|+|+|.+.|+++... |- ...+.++.-+++|
T Consensus 145 ~~~vDvVf~d~~~~~~----------------~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~G 208 (233)
T 4df3_A 145 VEGVDGLYADVAQPEQ----------------AAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGG 208 (233)
T ss_dssp CCCEEEEEECCCCTTH----------------HHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTT
T ss_pred cceEEEEEEeccCChh----------------HHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCC
Confidence 3679999999998852 23688999999999999999986542 11 1133444556789
Q ss_pred cEEEEEeeCCC
Q 016441 173 LSLIWCSEFKI 183 (389)
Q Consensus 173 L~L~~~~~F~~ 183 (389)
|.+++...+++
T Consensus 209 F~l~e~i~L~p 219 (233)
T 4df3_A 209 LEIKDVVHLDP 219 (233)
T ss_dssp CCEEEEEECTT
T ss_pred CEEEEEEccCC
Confidence 99999887654
No 32
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.04 E-value=0.0016 Score=59.94 Aligned_cols=129 Identities=16% Similarity=0.190 Sum_probs=86.5
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH-HhCCCEEEeccccCCCCCCCCcC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNL-KKLGTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~L-r~~Gv~VlfgVDATkL~~~~~Lk 99 (389)
..++.+||=+|=|.=.++..|++..+.+..+++.-.+ ++..+ .+++|++.. ....+.+ ...|+.+ .+.
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s--~~~~~---~a~~~~~~~~g~~~v~~-~~~d~~~-----~~~ 176 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERD--EDNLK---KAMDNLSEFYDIGNVRT-SRSDIAD-----FIS 176 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSC--HHHHH---HHHHHHHTTSCCTTEEE-ECSCTTT-----CCC
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECC--HHHHH---HHHHHHHhcCCCCcEEE-EECchhc-----cCc
Confidence 4567899999999999999999875444567665443 33332 355565433 2112343 3447765 133
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEEe
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWCS 179 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~ 179 (389)
...||.|+.|.|+. ..+++.+..+|+++|.+.++..... ...++.+..+++||..++..
T Consensus 177 ~~~fD~Vi~~~~~~-------------------~~~l~~~~~~LkpgG~l~i~~~~~~--~~~~~~~~l~~~Gf~~~~~~ 235 (275)
T 1yb2_A 177 DQMYDAVIADIPDP-------------------WNHVQKIASMMKPGSVATFYLPNFD--QSEKTVLSLSASGMHHLETV 235 (275)
T ss_dssp SCCEEEEEECCSCG-------------------GGSHHHHHHTEEEEEEEEEEESSHH--HHHHHHHHSGGGTEEEEEEE
T ss_pred CCCccEEEEcCcCH-------------------HHHHHHHHHHcCCCCEEEEEeCCHH--HHHHHHHHHHHCCCeEEEEE
Confidence 46899999977643 1678889999999999999875432 23456666677899888776
Q ss_pred eC
Q 016441 180 EF 181 (389)
Q Consensus 180 ~F 181 (389)
..
T Consensus 236 ~~ 237 (275)
T 1yb2_A 236 EL 237 (275)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 33
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.03 E-value=0.0045 Score=55.17 Aligned_cols=136 Identities=11% Similarity=0.078 Sum_probs=85.9
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
..++.+||=+|=|.=.++..|++..+ ...++|.-.+ ++..+ .+..|.+.. .++.+ ..-|+........+.
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s--~~~~~---~a~~~~~~~--~~v~~-~~~d~~~~~~~~~~~- 141 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYA--PRIMR---ELLDACAER--ENIIP-ILGDANKPQEYANIV- 141 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESC--HHHHH---HHHHHTTTC--TTEEE-EECCTTCGGGGTTTS-
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECC--HHHHH---HHHHHhhcC--CCeEE-EECCCCCcccccccC-
Confidence 34678999999999999999999876 4567776554 22222 234443322 23333 345776622212233
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC-CCCC-------cccHHHHHhhCC
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT-VPFS-------NWNIKELAIGSS 172 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g-~PY~-------sWnIe~LAa~aG 172 (389)
..||.|+.++|..+ ....+++.+..+|+|+|.+.|+++.. .+.. .-.+. +.+++|
T Consensus 142 ~~~D~v~~~~~~~~----------------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~G 204 (230)
T 1fbn_A 142 EKVDVIYEDVAQPN----------------QAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGG 204 (230)
T ss_dssp CCEEEEEECCCSTT----------------HHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHT
T ss_pred ccEEEEEEecCChh----------------HHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCC
Confidence 67999996655433 24577889999999999999985432 1111 13444 556789
Q ss_pred cEEEEEeeCCC
Q 016441 173 LSLIWCSEFKI 183 (389)
Q Consensus 173 L~L~~~~~F~~ 183 (389)
|.+++..++++
T Consensus 205 f~~~~~~~~~~ 215 (230)
T 1fbn_A 205 FKIVDEVDIEP 215 (230)
T ss_dssp EEEEEEEECTT
T ss_pred CEEEEEEccCC
Confidence 99988876543
No 34
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=97.02 E-value=0.0047 Score=53.09 Aligned_cols=128 Identities=16% Similarity=0.134 Sum_probs=84.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
...+||=||=|.=.++..|++. +.+++++-++ +++. +..++.+.......|+.++.........+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s--~~~~----------~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADR---GIEAVGVDGD--RTLV----------DAARAAGAGEVHLASYAQLAEAKVPVGKD 116 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTT---TCEEEEEESC--HHHH----------HHHHHTCSSCEEECCHHHHHTTCSCCCCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCC--HHHH----------HHHHHhcccccchhhHHhhcccccccCCC
Confidence 4589999999999999999876 3466665443 2222 22222233334455666664433344567
Q ss_pred cceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCC------------------------
Q 016441 103 FDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVP------------------------ 158 (389)
Q Consensus 103 FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P------------------------ 158 (389)
||.|+.++... . ++ ...+++.+..+|+++|.+.|+......
T Consensus 117 fD~v~~~~~l~-~---~~-----------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (227)
T 3e8s_A 117 YDLICANFALL-H---QD-----------IIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQP 181 (227)
T ss_dssp EEEEEEESCCC-S---SC-----------CHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCC
T ss_pred ccEEEECchhh-h---hh-----------HHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCccc
Confidence 99999997765 2 22 236888999999999999998642110
Q ss_pred -----CCcccHHHHHhhCCcEEEEEee
Q 016441 159 -----FSNWNIKELAIGSSLSLIWCSE 180 (389)
Q Consensus 159 -----Y~sWnIe~LAa~aGL~L~~~~~ 180 (389)
++.-++.++.+++||.+++...
T Consensus 182 ~~~~~~~~~~~~~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 182 MPWYFRTLASWLNALDMAGLRLVSLQE 208 (227)
T ss_dssp EEEEECCHHHHHHHHHHTTEEEEEEEC
T ss_pred ceEEEecHHHHHHHHHHcCCeEEEEec
Confidence 1223466788999999998765
No 35
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=97.00 E-value=0.0085 Score=54.78 Aligned_cols=135 Identities=14% Similarity=0.059 Sum_probs=88.9
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCCCCCc
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMELHPDL 98 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~~~~L 98 (389)
...+..+||=||=|.=.++..|++.++ ..+++.-.. +.+.+ .++.++....- ..+.+. ..|+.++. +
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s--~~~~~---~a~~~~~~~~~~~~~~~~-~~d~~~~~----~ 146 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIA--PVQNK---RNEEYNNQAGLADNITVK-YGSFLEIP----C 146 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESC--HHHHH---HHHHHHHHHTCTTTEEEE-ECCTTSCS----S
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCC--HHHHH---HHHHHHHhcCCCcceEEE-EcCcccCC----C
Confidence 456788999999999999999998874 366665443 33332 24444433221 124443 44777653 3
Q ss_pred CCCCcceEEEcCC--CCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC---CC---------------
Q 016441 99 RTRKFDRIIFNFP--HAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT---VP--------------- 158 (389)
Q Consensus 99 k~~~FDrIIFNFP--H~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g---~P--------------- 158 (389)
....||.|+.++. |+. + ...+|+.+..+|+|+|.+.++-... .+
T Consensus 147 ~~~~fD~v~~~~~l~~~~-----~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (297)
T 2o57_A 147 EDNSYDFIWSQDAFLHSP-----D-----------KLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHD 210 (297)
T ss_dssp CTTCEEEEEEESCGGGCS-----C-----------HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSS
T ss_pred CCCCEeEEEecchhhhcC-----C-----------HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCC
Confidence 4578999998854 332 1 3588999999999999998875321 11
Q ss_pred -CCcccHHHHHhhCCcEEEEEeeCC
Q 016441 159 -FSNWNIKELAIGSSLSLIWCSEFK 182 (389)
Q Consensus 159 -Y~sWnIe~LAa~aGL~L~~~~~F~ 182 (389)
.+.-.+.++.+++||.+++...+.
T Consensus 211 ~~~~~~~~~~l~~aGf~~~~~~~~~ 235 (297)
T 2o57_A 211 MGSLGLYRSLAKECGLVTLRTFSRP 235 (297)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEEECH
T ss_pred CCCHHHHHHHHHHCCCeEEEEEECc
Confidence 122345678899999999887654
No 36
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=96.99 E-value=0.00089 Score=62.10 Aligned_cols=149 Identities=18% Similarity=0.149 Sum_probs=92.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.++.+||=+|=|.=.++..|++..+....|+|.-.+ ....+ .+++|++.+.-.++.++ .-|++++.........
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~--~~~l~---~~~~~~~~~g~~~v~~~-~~D~~~~~~~~~~~~~ 155 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEIS--KTRTK---ALKSNINRMGVLNTIII-NADMRKYKDYLLKNEI 155 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESC--HHHHH---HHHHHHHHTTCCSEEEE-ESCHHHHHHHHHHTTC
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCC--HHHHH---HHHHHHHHhCCCcEEEE-eCChHhcchhhhhccc
Confidence 467899999998888999999876444567776554 22222 25666655432234443 4577765321000146
Q ss_pred CcceEEEcCCCCCCCCCc--c---chHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCC-CcccHHHH-HhhCCcE
Q 016441 102 KFDRIIFNFPHAGFYGKE--D---NHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPF-SNWNIKEL-AIGSSLS 174 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkE--D---~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY-~sWnIe~L-Aa~aGL~ 174 (389)
.||+|+.|-|..|. |.- + ....+.....+...++..|..+|++||.+.++.|+-.|- +...|..+ +++.++.
T Consensus 156 ~fD~Vl~d~Pcs~~-g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~~~~~ 234 (274)
T 3ajd_A 156 FFDKILLDAPCSGN-IIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKRNDVE 234 (274)
T ss_dssp CEEEEEEEECCC-------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHCSSEE
T ss_pred cCCEEEEcCCCCCC-cccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhCCCcE
Confidence 79999999999874 210 0 011122233456789999999999999999999987664 44555553 4556777
Q ss_pred EEE
Q 016441 175 LIW 177 (389)
Q Consensus 175 L~~ 177 (389)
++.
T Consensus 235 ~~~ 237 (274)
T 3ajd_A 235 LII 237 (274)
T ss_dssp EEC
T ss_pred Eec
Confidence 654
No 37
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=96.99 E-value=0.0073 Score=53.61 Aligned_cols=135 Identities=12% Similarity=0.109 Sum_probs=91.4
Q ss_pred ccccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC
Q 016441 16 KWIKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH 95 (389)
Q Consensus 16 K~~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~ 95 (389)
.++....+..+||=||=|.=.++..|++. +.++++.-.+ .+..+ ..++. +.+ ...|+.++-.
T Consensus 34 ~~l~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s--~~~~~----------~a~~~-~~~-~~~d~~~~~~- 95 (240)
T 3dli_A 34 RYIPYFKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDIN--EDMIK----------FCEGK-FNV-VKSDAIEYLK- 95 (240)
T ss_dssp GGGGGTTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSC--HHHHH----------HHHTT-SEE-ECSCHHHHHH-
T ss_pred HHHhhhcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECC--HHHHH----------HHHhh-cce-eeccHHHHhh-
Confidence 44566677899999999999999999886 3466655443 22221 22222 433 3456655311
Q ss_pred CCcCCCCcceEEEcCC--CCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC----------------
Q 016441 96 PDLRTRKFDRIIFNFP--HAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV---------------- 157 (389)
Q Consensus 96 ~~Lk~~~FDrIIFNFP--H~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~---------------- 157 (389)
.+....||.|+.+.- |+.. + -+..+|+.+..+|+|+|.+.++..+..
T Consensus 96 -~~~~~~fD~i~~~~~l~~~~~---~-----------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 160 (240)
T 3dli_A 96 -SLPDKYLDGVMISHFVEHLDP---E-----------RLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKK 160 (240)
T ss_dssp -TSCTTCBSEEEEESCGGGSCG---G-----------GHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCS
T ss_pred -hcCCCCeeEEEECCchhhCCc---H-----------HHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccc
Confidence 234578999998743 3321 1 146889999999999999999876532
Q ss_pred CCCcccHHHHHhhCCcEEEEEeeCCC
Q 016441 158 PFSNWNIKELAIGSSLSLIWCSEFKI 183 (389)
Q Consensus 158 PY~sWnIe~LAa~aGL~L~~~~~F~~ 183 (389)
+++...+.++.+++||.+++...+.+
T Consensus 161 ~~~~~~l~~~l~~aGf~~~~~~~~~~ 186 (240)
T 3dli_A 161 PVHPETLKFILEYLGFRDVKIEFFEE 186 (240)
T ss_dssp CCCHHHHHHHHHHHTCEEEEEEEECC
T ss_pred cCCHHHHHHHHHHCCCeEEEEEEecc
Confidence 24456788899999999999888864
No 38
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=96.99 E-value=0.0068 Score=52.52 Aligned_cols=135 Identities=13% Similarity=0.160 Sum_probs=87.3
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC------E-EEeccccCCCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGT------C-ILHGVDATTME 93 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv------~-VlfgVDATkL~ 93 (389)
..+..+||=||=|.=.++..|++. +.++++.-.+ ..+.+ .++.+ ++..+. . -+...|+..+.
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s--~~~~~---~a~~~---~~~~~~~~~~~~~~~~~~~d~~~~~ 96 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK---GYSVTGIDIN--SEAIR---LAETA---ARSPGLNQKTGGKAEFKVENASSLS 96 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHH---TTCCSCCSSSSCEEEEEECCTTSCC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECC--HHHHH---HHHHH---HHhcCCccccCcceEEEEecccccC
Confidence 346789999999999999999986 3466665444 22222 12222 233443 2 33455666653
Q ss_pred CCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC----------------
Q 016441 94 LHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV---------------- 157 (389)
Q Consensus 94 ~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~---------------- 157 (389)
+....||.|+.+....-. . +......+++.+..+|+++|.+.++.....
T Consensus 97 ----~~~~~~D~v~~~~~l~~~---~--------~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 161 (235)
T 3sm3_A 97 ----FHDSSFDFAVMQAFLTSV---P--------DPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPI 161 (235)
T ss_dssp ----SCTTCEEEEEEESCGGGC---C--------CHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHH
T ss_pred ----CCCCceeEEEEcchhhcC---C--------CHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccc
Confidence 345789999998654432 1 122244788899999999999988743211
Q ss_pred ----------------------CCCcccHHHHHhhCCcEEEEEeeC
Q 016441 158 ----------------------PFSNWNIKELAIGSSLSLIWCSEF 181 (389)
Q Consensus 158 ----------------------PY~sWnIe~LAa~aGL~L~~~~~F 181 (389)
.++.-.++++.+++||.+++....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 162 TKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp HCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTTEEEEEEEEE
T ss_pred hhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcCCEEEEEEec
Confidence 234456777888999998886543
No 39
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=96.98 E-value=0.0033 Score=58.32 Aligned_cols=130 Identities=17% Similarity=0.152 Sum_probs=84.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC---EEEeccccCCCCCCCCc
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGT---CILHGVDATTMELHPDL 98 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv---~VlfgVDATkL~~~~~L 98 (389)
.+..+||=||=|.=.++..|++.++ ..+++.-.+ ++..+ .+++++ ++.|. .-+...|+.++.
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s--~~~~~---~a~~~~---~~~~~~~~v~~~~~d~~~~~----- 153 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFD--VNVIGLTLS--KNQHA---RCEQVL---ASIDTNRSRQVLLQGWEDFA----- 153 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESC--HHHHH---HHHHHH---HTSCCSSCEEEEESCGGGCC-----
T ss_pred CCcCEEEEEcccchHHHHHHHHHCC--CEEEEEECC--HHHHH---HHHHHH---HhcCCCCceEEEECChHHCC-----
Confidence 4678999999999999999998874 466665544 22222 133333 33332 223345776652
Q ss_pred CCCCcceEEEcCC--CCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCC------------------
Q 016441 99 RTRKFDRIIFNFP--HAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVP------------------ 158 (389)
Q Consensus 99 k~~~FDrIIFNFP--H~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P------------------ 158 (389)
..||.|+.+.. |++. ++ ...+|+.+..+|+|+|.+.|+......
T Consensus 154 --~~fD~v~~~~~l~~~~~---~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (318)
T 2fk8_A 154 --EPVDRIVSIEAFEHFGH---EN-----------YDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARF 217 (318)
T ss_dssp --CCCSEEEEESCGGGTCG---GG-----------HHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHH
T ss_pred --CCcCEEEEeChHHhcCH---HH-----------HHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccch
Confidence 57999998843 4431 11 457889999999999999887643221
Q ss_pred --------------CCcccHHHHHhhCCcEEEEEeeCC
Q 016441 159 --------------FSNWNIKELAIGSSLSLIWCSEFK 182 (389)
Q Consensus 159 --------------Y~sWnIe~LAa~aGL~L~~~~~F~ 182 (389)
++.=.+.++.+++||.+++...+.
T Consensus 218 ~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 255 (318)
T 2fk8_A 218 IKFIVTEIFPGGRLPSTEMMVEHGEKAGFTVPEPLSLR 255 (318)
T ss_dssp HHHHHHHTSTTCCCCCHHHHHHHHHHTTCBCCCCEECH
T ss_pred hhHHHHhcCCCCcCCCHHHHHHHHHhCCCEEEEEEecc
Confidence 122246667888899888776654
No 40
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=96.98 E-value=0.00089 Score=60.51 Aligned_cols=143 Identities=17% Similarity=0.272 Sum_probs=90.7
Q ss_pred cccccCCCC-----------CCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-----
Q 016441 15 EKWIKHYSS-----------NHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK----- 78 (389)
Q Consensus 15 ~K~~~~Yss-----------~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~----- 78 (389)
..|...|.. ..+||=||=|.=.|+..||+... ..++++. |..+.+.+ .+.+|++.++.
T Consensus 30 ~~w~~~f~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gv--D~s~~~l~---~a~~~~~~~~~~~~~~ 103 (246)
T 2vdv_E 30 MDWSKLYPYYKNAENGQMTKKVTIADIGCGFGGLMIDLSPAFP-EDLILGM--EIRVQVTN---YVEDRIIALRNNTASK 103 (246)
T ss_dssp CCGGGTCGGGBC----CBSCCEEEEEETCTTSHHHHHHHHHST-TSEEEEE--ESCHHHHH---HHHHHHHHHHHTC-CC
T ss_pred CCHHHHhCcccccccccCCCCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEE--EcCHHHHH---HHHHHHHHHhhccccc
Confidence 367777764 56799999999999999998762 3456654 53333333 36677776632
Q ss_pred ---CCCEEEeccccCC-CCCCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEec
Q 016441 79 ---LGTCILHGVDATT-MELHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHK 154 (389)
Q Consensus 79 ---~Gv~VlfgVDATk-L~~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk 154 (389)
.++. +...|+.+ |... +....+|.|+.+||-.-.+.+.. ..+.+...|+..+..+|++||.+.++..
T Consensus 104 ~~~~nv~-~~~~D~~~~l~~~--~~~~~~d~v~~~~p~p~~k~~~~------~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 104 HGFQNIN-VLRGNAMKFLPNF--FEKGQLSKMFFCFPDPHFKQRKH------KARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp STTTTEE-EEECCTTSCGGGT--SCTTCEEEEEEESCCCC------------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred cCCCcEE-EEeccHHHHHHHh--ccccccCEEEEECCCcccccchh------HHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 1333 34568876 4322 34578999999999866433211 1122236788999999999999998543
Q ss_pred CCCCCCcccHHHHHhhCCc
Q 016441 155 TTVPFSNWNIKELAIGSSL 173 (389)
Q Consensus 155 ~g~PY~sWnIe~LAa~aGL 173 (389)
. ..|..|-.+.+.....+
T Consensus 175 ~-~~~~~~~~~~~~~~~~~ 192 (246)
T 2vdv_E 175 V-KDLHEWMVKHLEEHPLF 192 (246)
T ss_dssp C-HHHHHHHHHHHHHSTTE
T ss_pred c-HHHHHHHHHHHHhCcCe
Confidence 3 34667776666554433
No 41
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=96.96 E-value=0.0075 Score=53.77 Aligned_cols=134 Identities=16% Similarity=0.189 Sum_probs=86.0
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
..+..+||=||=|.=.++..|++.. ..+++. |-.+++.+ .++.+++...-.++.+. ..|+.++. +..
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~v--D~s~~~~~---~a~~~~~~~~~~~v~~~-~~d~~~~~----~~~ 85 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYV---QECIGV--DATKEMVE---VASSFAQEKGVENVRFQ-QGTAESLP----FPD 85 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGS---SEEEEE--ESCHHHHH---HHHHHHHHHTCCSEEEE-ECBTTBCC----SCT
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhC---CEEEEE--ECCHHHHH---HHHHHHHHcCCCCeEEE-ecccccCC----CCC
Confidence 3567899999999999999998764 256554 43333332 24445444322234444 44777653 345
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC----------------------CC
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT----------------------VP 158 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g----------------------~P 158 (389)
..||.|+.++.---. .| ...+++.+..+|+++|.+.++-... ..
T Consensus 86 ~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (239)
T 1xxl_A 86 DSFDIITCRYAAHHF---SD-----------VRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRE 151 (239)
T ss_dssp TCEEEEEEESCGGGC---SC-----------HHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCC
T ss_pred CcEEEEEECCchhhc---cC-----------HHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCC
Confidence 789999998643221 11 3478899999999999999874322 11
Q ss_pred CCcccHHHHHhhCCcEEEEEeeC
Q 016441 159 FSNWNIKELAIGSSLSLIWCSEF 181 (389)
Q Consensus 159 Y~sWnIe~LAa~aGL~L~~~~~F 181 (389)
++.-.+.++.+++||..+....+
T Consensus 152 ~~~~~~~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 152 SSLSEWQAMFSANQLAYQDIQKW 174 (239)
T ss_dssp CBHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCHHHHHHHHHHCCCcEEEEEee
Confidence 23334566778889988876655
No 42
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=96.95 E-value=0.0028 Score=61.68 Aligned_cols=157 Identities=17% Similarity=0.181 Sum_probs=97.9
Q ss_pred cccccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCC
Q 016441 15 EKWIKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMEL 94 (389)
Q Consensus 15 ~K~~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~ 94 (389)
..++..+ ++.+||=+|=|.=.||..+|+. +..++|.-.+ .+..+ .++.|++...-.++. .+.-|+.++-.
T Consensus 202 ~~~~~~~-~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s--~~~~~---~a~~n~~~n~~~~~~-~~~~d~~~~~~ 271 (382)
T 1wxx_A 202 RLYMERF-RGERALDVFSYAGGFALHLALG---FREVVAVDSS--AEALR---RAEENARLNGLGNVR-VLEANAFDLLR 271 (382)
T ss_dssp HHHGGGC-CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESC--HHHHH---HHHHHHHHTTCTTEE-EEESCHHHHHH
T ss_pred HHHHHhc-CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECC--HHHHH---HHHHHHHHcCCCCce-EEECCHHHHHH
Confidence 3455556 7778999999999999999986 3456655443 33332 366676543322333 44457765421
Q ss_pred CCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCC-cc--cHHHHHhhC
Q 016441 95 HPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFS-NW--NIKELAIGS 171 (389)
Q Consensus 95 ~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~-sW--nIe~LAa~a 171 (389)
...-...+||.|+.|-|-.+. ++++ +.........++..|..+|+++|.+.++.+....-. .| .+.+.+.++
T Consensus 272 ~~~~~~~~fD~Ii~dpP~~~~-~~~~----~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~ 346 (382)
T 1wxx_A 272 RLEKEGERFDLVVLDPPAFAK-GKKD----VERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDA 346 (382)
T ss_dssp HHHHTTCCEEEEEECCCCSCC-STTS----HHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred HHHhcCCCeeEEEECCCCCCC-ChhH----HHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHc
Confidence 100014689999999998874 3332 444556678899999999999999999988765422 12 233456667
Q ss_pred C--cEEEEEeeCCCCCCC
Q 016441 172 S--LSLIWCSEFKIEDYP 187 (389)
Q Consensus 172 G--L~L~~~~~F~~~~YP 187 (389)
| +.+++. ...+.++|
T Consensus 347 g~~~~~i~~-~~~~~d~p 363 (382)
T 1wxx_A 347 HRLLRVVEK-RGQPFDHP 363 (382)
T ss_dssp TCCEEEEEE-ECCCTTSC
T ss_pred CCeEEEEEc-CCCCCCCC
Confidence 6 444443 23445555
No 43
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=96.95 E-value=0.0037 Score=57.27 Aligned_cols=128 Identities=18% Similarity=0.189 Sum_probs=84.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCCCCCcCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
.+..+||-+|=|.=.++.+|++..+....+++.-.+ ++..+ .+++|++...- ..+. +..-|+.+. +..
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~v~-~~~~d~~~~-----~~~ 179 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKR--EEFAK---LAESNLTKWGLIERVT-IKVRDISEG-----FDE 179 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCC--HHHHH---HHHHHHHHTTCGGGEE-EECCCGGGC-----CSC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECC--HHHHH---HHHHHHHHcCCCCCEE-EEECCHHHc-----ccC
Confidence 457799999999999999999986555566665443 33332 35566554321 1233 344566654 334
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEEee
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWCSE 180 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~~ 180 (389)
..||.|+.|.|.. ..++..+..+|+++|.+.+...... ....+.+..++.|+..++...
T Consensus 180 ~~~D~V~~~~~~~-------------------~~~l~~~~~~L~pgG~l~~~~~~~~--~~~~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 180 KDVDALFLDVPDP-------------------WNYIDKCWEALKGGGRFATVCPTTN--QVQETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp CSEEEEEECCSCG-------------------GGTHHHHHHHEEEEEEEEEEESSHH--HHHHHHHHHHHSSEEEEEEEC
T ss_pred CccCEEEECCcCH-------------------HHHHHHHHHHcCCCCEEEEEeCCHH--HHHHHHHHHHHCCCceeEEEE
Confidence 6799999987633 2577888999999999998875331 223455556679998777654
Q ss_pred C
Q 016441 181 F 181 (389)
Q Consensus 181 F 181 (389)
-
T Consensus 239 ~ 239 (277)
T 1o54_A 239 S 239 (277)
T ss_dssp C
T ss_pred E
Confidence 3
No 44
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=96.88 E-value=0.004 Score=55.69 Aligned_cols=133 Identities=14% Similarity=0.143 Sum_probs=88.6
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
..+..+||=+|=|.=.++.+|++..+....+++.-.+ ++..+ .|++|++...-.+...+..-|+.+. +..
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~--~~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~ 160 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIR--EDFAK---LAWENIKWAGFDDRVTIKLKDIYEG-----IEE 160 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSC--HHHHH---HHHHHHHHHTCTTTEEEECSCGGGC-----CCC
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecC--HHHHH---HHHHHHHHcCCCCceEEEECchhhc-----cCC
Confidence 3567899999999999999999986655667665443 33332 3666776554333234455676643 334
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCC--cEEEEE
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSS--LSLIWC 178 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aG--L~L~~~ 178 (389)
..||.|+.|.|.. ..+++.+..+|+++|.+.+...... ....+.+..++.| +..++.
T Consensus 161 ~~~D~v~~~~~~~-------------------~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~l~~~g~~f~~~~~ 219 (255)
T 3mb5_A 161 ENVDHVILDLPQP-------------------ERVVEHAAKALKPGGFFVAYTPCSN--QVMRLHEKLREFKDYFMKPRT 219 (255)
T ss_dssp CSEEEEEECSSCG-------------------GGGHHHHHHHEEEEEEEEEEESSHH--HHHHHHHHHHHTGGGBSCCEE
T ss_pred CCcCEEEECCCCH-------------------HHHHHHHHHHcCCCCEEEEEECCHH--HHHHHHHHHHHcCCCccccEE
Confidence 6799999987733 2578889999999999988753321 2234556667788 776666
Q ss_pred eeCCCC
Q 016441 179 SEFKIE 184 (389)
Q Consensus 179 ~~F~~~ 184 (389)
......
T Consensus 220 ~e~~~r 225 (255)
T 3mb5_A 220 INVLVF 225 (255)
T ss_dssp ECCCCC
T ss_pred EEEeee
Confidence 554433
No 45
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=96.84 E-value=0.019 Score=50.82 Aligned_cols=135 Identities=10% Similarity=0.135 Sum_probs=88.1
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
..+..+||=||=|.=.++..|++.+ +..+++.-.+ +++.+. +..++... ..+. ....|+.++. +..
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s--~~~~~~---a~~~~~~~--~~~~-~~~~d~~~~~----~~~ 118 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDIC--SNIVNM---ANERVSGN--NKII-FEANDILTKE----FPE 118 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESC--HHHHHH---HHHTCCSC--TTEE-EEECCTTTCC----CCT
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCC--HHHHHH---HHHHhhcC--CCeE-EEECccccCC----CCC
Confidence 3467799999999999999999987 3466665443 222221 22222111 2233 3455777763 345
Q ss_pred CCcceEEEcCC--CCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC-------------------CC
Q 016441 101 RKFDRIIFNFP--HAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV-------------------PF 159 (389)
Q Consensus 101 ~~FDrIIFNFP--H~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~-------------------PY 159 (389)
..||.|+.+.. |++ ..-...+++.+..+|+|+|.+.++-.... .+
T Consensus 119 ~~fD~v~~~~~l~~~~--------------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (266)
T 3ujc_A 119 NNFDLIYSRDAILALS--------------LENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLI 184 (266)
T ss_dssp TCEEEEEEESCGGGSC--------------HHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCC
T ss_pred CcEEEEeHHHHHHhcC--------------hHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCC
Confidence 78999999843 332 12245888999999999999998864221 12
Q ss_pred CcccHHHHHhhCCcEEEEEeeCCC
Q 016441 160 SNWNIKELAIGSSLSLIWCSEFKI 183 (389)
Q Consensus 160 ~sWnIe~LAa~aGL~L~~~~~F~~ 183 (389)
+.-.+.++.+++||..++...+..
T Consensus 185 ~~~~~~~~l~~~Gf~~~~~~~~~~ 208 (266)
T 3ujc_A 185 TVEEYADILTACNFKNVVSKDLSD 208 (266)
T ss_dssp CHHHHHHHHHHTTCEEEEEEECHH
T ss_pred CHHHHHHHHHHcCCeEEEEEeCCH
Confidence 334577788899999998876653
No 46
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=96.83 E-value=0.005 Score=53.28 Aligned_cols=126 Identities=17% Similarity=0.169 Sum_probs=85.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||=||=|.=.++..|++. + ...++|.-.+ +++.+ .++.|+....-.++.+ ..-|+.+. ...
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~v~~-~~~d~~~~------~~~ 124 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKL-G-AKSVLATDIS--DESMT---AAEENAALNGIYDIAL-QKTSLLAD------VDG 124 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESC--HHHHH---HHHHHHHHTTCCCCEE-EESSTTTT------CCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHC-C-CCEEEEEECC--HHHHH---HHHHHHHHcCCCceEE-Eecccccc------CCC
Confidence 45789999999999999998874 3 3466665544 33332 2555655443333443 34566543 136
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEEee
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWCSE 180 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~~ 180 (389)
.||.|+.|.|. ..+..+++.+..+|+++|.+.++.... .....+.++.+++|+.+++...
T Consensus 125 ~fD~i~~~~~~-----------------~~~~~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~~~~~~Gf~~~~~~~ 184 (205)
T 3grz_A 125 KFDLIVANILA-----------------EILLDLIPQLDSHLNEDGQVIFSGIDY--LQLPKIEQALAENSFQIDLKMR 184 (205)
T ss_dssp CEEEEEEESCH-----------------HHHHHHGGGSGGGEEEEEEEEEEEEEG--GGHHHHHHHHHHTTEEEEEEEE
T ss_pred CceEEEECCcH-----------------HHHHHHHHHHHHhcCCCCEEEEEecCc--ccHHHHHHHHHHcCCceEEeec
Confidence 89999999753 124788999999999999999864332 2455678888999999887654
No 47
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=96.83 E-value=0.027 Score=48.45 Aligned_cols=130 Identities=12% Similarity=0.133 Sum_probs=86.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||=||=|.=.++..|++. + .++++.-.+ +++ ++..++....+ ...|+.++.. .+...
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~~--~~~----------~~~~~~~~~~~-~~~d~~~~~~--~~~~~ 92 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEAF--PEA----------AEQAKEKLDHV-VLGDIETMDM--PYEEE 92 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T--CEEEEEESS--HHH----------HHHHHTTSSEE-EESCTTTCCC--CSCTT
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeCC--HHH----------HHHHHHhCCcE-EEcchhhcCC--CCCCC
Confidence 56789999999999999999886 3 566665443 222 22223333333 4457665322 23457
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC-------------------------
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT------------------------- 156 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g------------------------- 156 (389)
.||.|+.+..---. .+ ...+++.+..+|+++|.+.++....
T Consensus 93 ~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (230)
T 3cc8_A 93 QFDCVIFGDVLEHL---FD-----------PWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKT 158 (230)
T ss_dssp CEEEEEEESCGGGS---SC-----------HHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTT
T ss_pred ccCEEEECChhhhc---CC-----------HHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcc
Confidence 89999997542211 11 1378999999999999999986431
Q ss_pred --CCCCcccHHHHHhhCCcEEEEEeeCCC
Q 016441 157 --VPFSNWNIKELAIGSSLSLIWCSEFKI 183 (389)
Q Consensus 157 --~PY~sWnIe~LAa~aGL~L~~~~~F~~ 183 (389)
..++.-.++++.+++||.++....+..
T Consensus 159 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 187 (230)
T 3cc8_A 159 HIRFFTFNEMLRMFLKAGYSISKVDRVYV 187 (230)
T ss_dssp CCCCCCHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred eEEEecHHHHHHHHHHcCCeEEEEEeccc
Confidence 113455677899999999988776554
No 48
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=96.82 E-value=0.0063 Score=54.06 Aligned_cols=136 Identities=13% Similarity=0.043 Sum_probs=85.3
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
...+.+||=+|=|.=.++..|++.++....++|.-.. .+.+.. +.++.+.. .++.+ ...|+.+.... ....
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s-~~~i~~----~~~~a~~~--~~v~~-~~~d~~~~~~~-~~~~ 145 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFS-HRSGRD----LINLAKKR--TNIIP-VIEDARHPHKY-RMLI 145 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCC-HHHHHH----HHHHHHHC--TTEEE-ECSCTTCGGGG-GGGC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECC-HHHHHH----HHHHhhcc--CCeEE-EEcccCChhhh-cccC
Confidence 3467899999999999999999987544567665333 222211 12222211 34443 44577763211 1224
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC-----C----CCcccHHHHHhhC
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV-----P----FSNWNIKELAIGS 171 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~-----P----Y~sWnIe~LAa~a 171 (389)
..||.|+.|.|... ....++..+..+|+|+|.+.|+..... + +..+ .++.+++
T Consensus 146 ~~~D~V~~~~~~~~----------------~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~--~~~l~~~ 207 (233)
T 2ipx_A 146 AMVDVIFADVAQPD----------------QTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASE--VKKMQQE 207 (233)
T ss_dssp CCEEEEEECCCCTT----------------HHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHH--HHTTGGG
T ss_pred CcEEEEEEcCCCcc----------------HHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHH--HHHHHHC
Confidence 68999999988211 123567779999999999999876421 1 1222 3566788
Q ss_pred CcEEEEEeeCCC
Q 016441 172 SLSLIWCSEFKI 183 (389)
Q Consensus 172 GL~L~~~~~F~~ 183 (389)
||.+++..+.++
T Consensus 208 Gf~~~~~~~~~~ 219 (233)
T 2ipx_A 208 NMKPQEQLTLEP 219 (233)
T ss_dssp TEEEEEEEECTT
T ss_pred CCceEEEEecCC
Confidence 999998776653
No 49
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=96.81 E-value=0.0039 Score=54.29 Aligned_cols=135 Identities=16% Similarity=0.258 Sum_probs=88.1
Q ss_pred ccccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC
Q 016441 16 KWIKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH 95 (389)
Q Consensus 16 K~~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~ 95 (389)
+.+.++.+..+||=||=|.=.++..|++.. .++++.-.+ +++.+ .++.+... ++.++. .|+.++
T Consensus 35 ~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s--~~~~~---~a~~~~~~----~v~~~~-~d~~~~--- 98 (250)
T 2p7i_A 35 RAFTPFFRPGNLLELGSFKGDFTSRLQEHF---NDITCVEAS--EEAIS---HAQGRLKD----GITYIH-SRFEDA--- 98 (250)
T ss_dssp HHHGGGCCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESC--HHHHH---HHHHHSCS----CEEEEE-SCGGGC---
T ss_pred HHHHhhcCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCC--HHHHH---HHHHhhhC----CeEEEE-ccHHHc---
Confidence 345556678899999999999999998753 366665443 22222 12222211 455443 477776
Q ss_pred CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhH-hcccCCCeEEEEecCCC-----------------
Q 016441 96 PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSS-GMLRDGGEVHVSHKTTV----------------- 157 (389)
Q Consensus 96 ~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~-~lL~~~GeIHVTLk~g~----------------- 157 (389)
.....||.|+.++----. +| ...+++.+. .+|+|+|.+.|+..+..
T Consensus 99 --~~~~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 162 (250)
T 2p7i_A 99 --QLPRRYDNIVLTHVLEHI---DD-----------PVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNS 162 (250)
T ss_dssp --CCSSCEEEEEEESCGGGC---SS-----------HHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTT
T ss_pred --CcCCcccEEEEhhHHHhh---cC-----------HHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccch
Confidence 134679999988631111 11 147888999 99999999999875422
Q ss_pred -------------CCCcccHHHHHhhCCcEEEEEeeCC
Q 016441 158 -------------PFSNWNIKELAIGSSLSLIWCSEFK 182 (389)
Q Consensus 158 -------------PY~sWnIe~LAa~aGL~L~~~~~F~ 182 (389)
+++.-.++++.+++||.+++...+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 200 (250)
T 2p7i_A 163 AVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRSGIF 200 (250)
T ss_dssp CCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred hcccccccccccccCCHHHHHHHHHHCCCeEEEEeeeE
Confidence 1334467888999999999876543
No 50
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=96.76 E-value=0.0082 Score=53.46 Aligned_cols=132 Identities=10% Similarity=0.050 Sum_probs=86.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
+..+||=||=|.=.++..|++.. ..+++++-.+ +++.+. +++++. ..++ .+...|+.++. +....
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~--~~~v~~vD~s--~~~~~~---a~~~~~---~~~~-~~~~~d~~~~~----~~~~~ 108 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHG--AKKVLGIDLS--ERMLTE---AKRKTT---SPVV-CYEQKAIEDIA----IEPDA 108 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESC--HHHHHH---HHHHCC---CTTE-EEEECCGGGCC----CCTTC
T ss_pred CCCEEEEECCCCCHHHHHHHHcC--CCEEEEEECC--HHHHHH---HHHhhc---cCCe-EEEEcchhhCC----CCCCC
Confidence 67899999999999999999873 2366665443 222221 333322 2233 34456777654 34578
Q ss_pred cceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC----------------C-------C-
Q 016441 103 FDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT----------------V-------P- 158 (389)
Q Consensus 103 FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g----------------~-------P- 158 (389)
||.|+.+...--. ++ ...+++.+..+|+++|.+.|+.... . .
T Consensus 109 fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (253)
T 3g5l_A 109 YNVVLSSLALHYI---AS-----------FDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRY 174 (253)
T ss_dssp EEEEEEESCGGGC---SC-----------HHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCT
T ss_pred eEEEEEchhhhhh---hh-----------HHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccc
Confidence 9999998743221 22 3578899999999999999984321 0 0
Q ss_pred -------------------CCcccHHHHHhhCCcEEEEEeeCCC
Q 016441 159 -------------------FSNWNIKELAIGSSLSLIWCSEFKI 183 (389)
Q Consensus 159 -------------------Y~sWnIe~LAa~aGL~L~~~~~F~~ 183 (389)
++.-.+.++.+++||.+++.....+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~~~ 218 (253)
T 3g5l_A 175 FNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIEPEP 218 (253)
T ss_dssp TCCCEEEEEETTEEEEEECCCHHHHHHHHHHTTEEEEEEECCCC
T ss_pred cccceEEEeeccccCccEecCHHHHHHHHHHcCCeeeeeecCCC
Confidence 0223477899999999999876554
No 51
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=96.76 E-value=0.0074 Score=54.09 Aligned_cols=133 Identities=15% Similarity=0.224 Sum_probs=82.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||=||=|.=.++..|++... .+++ .|..+++.+. +..+++...-.++.+ ...|+.++. +...
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~g--vD~s~~~l~~---a~~~~~~~~~~~v~~-~~~d~~~l~----~~~~ 102 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK---KVVA--FDLTEDILKV---ARAFIEGNGHQQVEY-VQGDAEQMP----FTDE 102 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS---EEEE--EESCHHHHHH---HHHHHHHTTCCSEEE-EECCC-CCC----SCTT
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC---EEEE--EeCCHHHHHH---HHHHHHhcCCCceEE-EEecHHhCC----CCCC
Confidence 4678999999999999999988642 5554 5533333332 444433211112333 345777653 4457
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC----------------------CCC
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT----------------------VPF 159 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g----------------------~PY 159 (389)
.||.|+.++----. .| ...+|+.+..+|+|+|.+.++-... ..+
T Consensus 103 ~fD~V~~~~~l~~~---~d-----------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (260)
T 1vl5_A 103 RFHIVTCRIAAHHF---PN-----------PASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAW 168 (260)
T ss_dssp CEEEEEEESCGGGC---SC-----------HHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCC
T ss_pred CEEEEEEhhhhHhc---CC-----------HHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCC
Confidence 89999998643221 12 2378899999999999999863211 112
Q ss_pred CcccHHHHHhhCCcEEEEEeeC
Q 016441 160 SNWNIKELAIGSSLSLIWCSEF 181 (389)
Q Consensus 160 ~sWnIe~LAa~aGL~L~~~~~F 181 (389)
+.-.+.++.+++||.++....+
T Consensus 169 ~~~~~~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 169 KKSDWLKMLEEAGFELEELHCF 190 (260)
T ss_dssp BHHHHHHHHHHHTCEEEEEEEE
T ss_pred CHHHHHHHHHHCCCeEEEEEEe
Confidence 2334566778889988776554
No 52
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=96.76 E-value=0.004 Score=57.81 Aligned_cols=137 Identities=16% Similarity=0.114 Sum_probs=89.9
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC---EEEeccccCCCCCCCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGT---CILHGVDATTMELHPD 97 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv---~VlfgVDATkL~~~~~ 97 (389)
..+..+||=||=|.=.++..||.....+.++++.-.+ +.+.+ .++.|+ ++.|. .-+..-|+.++.
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s--~~~~~---~a~~~~---~~~~~~~~v~~~~~d~~~~~---- 183 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYD--PEALD---GATRLA---AGHALAGQITLHRQDAWKLD---- 183 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESC--HHHHH---HHHHHH---TTSTTGGGEEEEECCGGGCC----
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECC--HHHHH---HHHHHH---HhcCCCCceEEEECchhcCC----
Confidence 4567899999999999999986433334566665443 33322 244443 33443 345567888764
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCC-------------------
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVP------------------- 158 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P------------------- 158 (389)
+. ..||.|+.|.+..-.. ...-...|++.+..+|+|||.+.|+.....|
T Consensus 184 ~~-~~fD~v~~~~~~~~~~-----------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~ 251 (305)
T 3ocj_A 184 TR-EGYDLLTSNGLNIYEP-----------DDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQ 251 (305)
T ss_dssp CC-SCEEEEECCSSGGGCC-----------CHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHH
T ss_pred cc-CCeEEEEECChhhhcC-----------CHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhh
Confidence 23 7899999987654321 1123456899999999999999998744321
Q ss_pred -----------------CCcccHHHHHhhCCcEEEEEeeC
Q 016441 159 -----------------FSNWNIKELAIGSSLSLIWCSEF 181 (389)
Q Consensus 159 -----------------Y~sWnIe~LAa~aGL~L~~~~~F 181 (389)
++.-.+.++.+++||..++....
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 291 (305)
T 3ocj_A 252 LQQLVFTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFEDD 291 (305)
T ss_dssp HHHHHHHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEECC
T ss_pred hhhhHHHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEEcc
Confidence 23334667889999999988763
No 53
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=96.75 E-value=0.0093 Score=53.86 Aligned_cols=137 Identities=20% Similarity=0.199 Sum_probs=88.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC---EEEeccccCCCCCCCCc
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGT---CILHGVDATTMELHPDL 98 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv---~VlfgVDATkL~~~~~L 98 (389)
.+..+||=||=|.=.++..|++. + ...+++.-.+ +++.+ .++.++ +..|. ..+...|+.++.. .
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s--~~~~~---~a~~~~---~~~~~~~~v~~~~~d~~~~~~---~ 129 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-G-IGEYYGVDIA--EVSIN---DARVRA---RNMKRRFKVFFRAQDSYGRHM---D 129 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-T-CSEEEEEESC--HHHHH---HHHHHH---HTSCCSSEEEEEESCTTTSCC---C
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-C-CCEEEEEECC--HHHHH---HHHHHH---HhcCCCccEEEEECCcccccc---C
Confidence 56789999999988888888775 3 3366665443 22222 133333 33332 2334557877632 1
Q ss_pred CCCCcceEEEcCC-CCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC---------------------
Q 016441 99 RTRKFDRIIFNFP-HAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT--------------------- 156 (389)
Q Consensus 99 k~~~FDrIIFNFP-H~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g--------------------- 156 (389)
....||.|+.++. |... .+..-...+++.+..+|+|+|.+.++..+.
T Consensus 130 ~~~~fD~v~~~~~l~~~~-----------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (298)
T 1ri5_A 130 LGKEFDVISSQFSFHYAF-----------STSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIEL 198 (298)
T ss_dssp CSSCEEEEEEESCGGGGG-----------SSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEEC
T ss_pred CCCCcCEEEECchhhhhc-----------CCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEe
Confidence 3578999999864 2211 122336689999999999999999886441
Q ss_pred -----CCC----------------------CcccHHHHHhhCCcEEEEEeeCC
Q 016441 157 -----VPF----------------------SNWNIKELAIGSSLSLIWCSEFK 182 (389)
Q Consensus 157 -----~PY----------------------~sWnIe~LAa~aGL~L~~~~~F~ 182 (389)
-|. +.-.++++++++||.+++...|.
T Consensus 199 ~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~ 251 (298)
T 1ri5_A 199 EKMEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGFI 251 (298)
T ss_dssp CCCSSCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEHH
T ss_pred CccccccccccceEEEEEchhhcCCcccccCHHHHHHHHHHcCCEEEEecCHH
Confidence 121 11257789999999999998775
No 54
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=96.69 E-value=0.0087 Score=52.20 Aligned_cols=104 Identities=18% Similarity=0.221 Sum_probs=67.6
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
+..+||=||=|.=.++..|++. +..+++. |-..++.+. ++.++.... .++.+. ..|+.++. +. ..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~--D~s~~~~~~---a~~~~~~~~-~~~~~~-~~d~~~~~----~~-~~ 101 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK---FKNTWAV--DLSQEMLSE---AENKFRSQG-LKPRLA-CQDISNLN----IN-RK 101 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG---SSEEEEE--CSCHHHHHH---HHHHHHHTT-CCCEEE-CCCGGGCC----CS-CC
T ss_pred CCCeEEEeCCCCCHHHHHHHHC---CCcEEEE--ECCHHHHHH---HHHHHhhcC-CCeEEE-ecccccCC----cc-CC
Confidence 5679999999999999999876 2455555 433333321 344433211 134443 44777654 22 67
Q ss_pred cceEEEcC---CCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEec
Q 016441 103 FDRIIFNF---PHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHK 154 (389)
Q Consensus 103 FDrIIFNF---PH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk 154 (389)
||.|+.++ +|+.. ..-+..+++.+..+|+++|.+.++..
T Consensus 102 fD~v~~~~~~l~~~~~-------------~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 102 FDLITCCLDSTNYIID-------------SDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp EEEEEECTTGGGGCCS-------------HHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ceEEEEcCccccccCC-------------HHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 99999976 56531 11255789999999999999998643
No 55
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=96.69 E-value=0.0074 Score=59.72 Aligned_cols=145 Identities=19% Similarity=0.183 Sum_probs=95.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.++.+||=+|=|.=.++..|++..+. ..|+|.-.+.. .+ ..+.+|++.+.- .+.+ ...|++++... +...
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~-~l----~~~~~~~~~~g~-~~~~-~~~D~~~~~~~--~~~~ 314 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQ-RL----SRVYDNLKRLGM-KATV-KQGDGRYPSQW--CGEQ 314 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTT-TH----HHHHHHHHHTTC-CCEE-EECCTTCTHHH--HTTC
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHH-HH----HHHHHHHHHcCC-CeEE-EeCchhhchhh--cccC
Confidence 46789999999999999999987643 56777665542 11 124556554321 2433 45688776421 2346
Q ss_pred CcceEEEcCCCCCCCCC----cc-----chHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCccc-HHH-HHhh
Q 016441 102 KFDRIIFNFPHAGFYGK----ED-----NHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWN-IKE-LAIG 170 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gk----ED-----~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWn-Ie~-LAa~ 170 (389)
.||+|+.|-|..|. |. .+ ....+.....+-..++.+|..+|++||.+.++.|+-.|-...+ |.. +++.
T Consensus 315 ~fD~Vl~D~Pcsg~-g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~ 393 (429)
T 1sqg_A 315 QFDRILLDAPCSAT-GVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRT 393 (429)
T ss_dssp CEEEEEEECCCCCG-GGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCcc-cccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhC
Confidence 89999999999884 21 11 0122444556678999999999999999999999877654443 444 4455
Q ss_pred CCcEEEE
Q 016441 171 SSLSLIW 177 (389)
Q Consensus 171 aGL~L~~ 177 (389)
.++.++.
T Consensus 394 ~~~~~~~ 400 (429)
T 1sqg_A 394 ADAELCE 400 (429)
T ss_dssp TTCEECS
T ss_pred CCCEEeC
Confidence 5776653
No 56
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=96.68 E-value=0.0016 Score=55.57 Aligned_cols=145 Identities=16% Similarity=0.127 Sum_probs=75.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||=+|=|.=.++..|++.. ...++++.-.+. ++.+ .++.|++.... .+. +...|+.+.-........
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~--~~~~---~a~~~~~~~~~-~~~-~~~~d~~~~~~~~~~~~~ 100 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSM--DALA---VARRNAERFGA-VVD-WAAADGIEWLIERAERGR 100 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC--------------------------CCHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCH--HHHH---HHHHHHHHhCC-ceE-EEEcchHhhhhhhhhccC
Confidence 677899999999999999999875 344666665543 2222 24445443322 222 223344441000000127
Q ss_pred CcceEEEcCCCCCCCCCccchHHHH------------HhHHHHHHHHHhhHhcccCCCe-EEEEecCCCCCCcccHHHHH
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIE------------MHRSLVRDFFRNSSGMLRDGGE-VHVSHKTTVPFSNWNIKELA 168 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir------------~nr~LL~~FF~SA~~lL~~~Ge-IHVTLk~g~PY~sWnIe~LA 168 (389)
.||.|+.|.|-............++ ...+.+..|++.+..+|+++|. +.+.+... ..-.+.++.
T Consensus 101 ~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---~~~~~~~~l 177 (215)
T 4dzr_A 101 PWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHN---QADEVARLF 177 (215)
T ss_dssp CBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTS---CHHHHHHHT
T ss_pred cccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCc---cHHHHHHHH
Confidence 8999999999765311111001111 1123348999999999999999 77666432 233455566
Q ss_pred h--hCCcEEEE
Q 016441 169 I--GSSLSLIW 177 (389)
Q Consensus 169 a--~aGL~L~~ 177 (389)
+ +.|+..++
T Consensus 178 ~~~~~gf~~~~ 188 (215)
T 4dzr_A 178 APWRERGFRVR 188 (215)
T ss_dssp GGGGGGTEECC
T ss_pred HHhhcCCceEE
Confidence 6 67765443
No 57
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=96.67 E-value=0.014 Score=52.59 Aligned_cols=137 Identities=15% Similarity=0.211 Sum_probs=89.8
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcC
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk 99 (389)
...+..+||=||=|+=.++..|++.. .+..++++-.+ ..+.+ .++.++....-.+ ......|+.++. +.
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~-~~~~~~d~~~~~----~~ 102 (276)
T 3mgg_A 34 VYPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDIS--PESLE---KARENTEKNGIKN-VKFLQANIFSLP----FE 102 (276)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESC--HHHHH---HHHHHHHHTTCCS-EEEEECCGGGCC----SC
T ss_pred cCCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECC--HHHHH---HHHHHHHHcCCCC-cEEEEcccccCC----CC
Confidence 44678899999999999999999875 34566665443 33332 2444443322122 333445777654 34
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC------------------------
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT------------------------ 155 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~------------------------ 155 (389)
...||.|+.++.-.-. .| ...+++.+..+|+|+|.+.++..+
T Consensus 103 ~~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (276)
T 3mgg_A 103 DSSFDHIFVCFVLEHL---QS-----------PEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQ 168 (276)
T ss_dssp TTCEEEEEEESCGGGC---SC-----------HHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred CCCeeEEEEechhhhc---CC-----------HHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHH
Confidence 5789999998654322 11 136788899999999999987532
Q ss_pred ----CCCCCcccHHHHHhhCCcEEEEEeeC
Q 016441 156 ----TVPFSNWNIKELAIGSSLSLIWCSEF 181 (389)
Q Consensus 156 ----g~PY~sWnIe~LAa~aGL~L~~~~~F 181 (389)
+.++..=.+..+.+++||..++..++
T Consensus 169 ~~~~~~~~~~~~l~~~l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 169 AYMKGNSLVGRQIYPLLQESGFEKIRVEPR 198 (276)
T ss_dssp HHTTCCTTGGGGHHHHHHHTTCEEEEEEEE
T ss_pred HhcCCCcchHHHHHHHHHHCCCCeEEEeeE
Confidence 12233345677899999999887755
No 58
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=96.61 E-value=0.0061 Score=62.02 Aligned_cols=147 Identities=16% Similarity=0.145 Sum_probs=102.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.++.+||=+|=|-=..|..||...+....|+|.-.+. +.+ ..+.+|++.+.-.++ .+..-|+.++... ...
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~-~rl----~~~~~n~~r~g~~nv-~v~~~Da~~l~~~---~~~ 174 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFP-KRA----KILSENIERWGVSNA-IVTNHAPAELVPH---FSG 174 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSH-HHH----HHHHHHHHHHTCSSE-EEECCCHHHHHHH---HTT
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCH-HHH----HHHHHHHHHcCCCce-EEEeCCHHHhhhh---ccc
Confidence 4578999999999899999998876555677765542 222 236777776643333 3445677775421 136
Q ss_pred CcceEEEcCCCCCCCCC--cc-------chHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCC-CcccHHHHHhhC
Q 016441 102 KFDRIIFNFPHAGFYGK--ED-------NHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPF-SNWNIKELAIGS 171 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gk--ED-------~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY-~sWnIe~LAa~a 171 (389)
.||+|+.|=|..|. |. .+ ....+.....+...++.+|..+|++||.+..+.|+-.|- +.-+|..+.++.
T Consensus 175 ~FD~Il~DaPCSg~-G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~ 253 (456)
T 3m4x_A 175 FFDRIVVDAPCSGE-GMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENY 253 (456)
T ss_dssp CEEEEEEECCCCCG-GGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHS
T ss_pred cCCEEEECCCCCCc-cccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhC
Confidence 79999999999884 31 00 112344455677799999999999999999999988764 556777777888
Q ss_pred CcEEEEE
Q 016441 172 SLSLIWC 178 (389)
Q Consensus 172 GL~L~~~ 178 (389)
++.++..
T Consensus 254 ~~~l~~~ 260 (456)
T 3m4x_A 254 PVTIEEI 260 (456)
T ss_dssp SEEEECC
T ss_pred CCEEEec
Confidence 8766543
No 59
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=96.60 E-value=0.037 Score=49.70 Aligned_cols=141 Identities=14% Similarity=0.071 Sum_probs=85.5
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCH-----HHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSY-----DDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMEL 94 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSe-----eeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~ 94 (389)
..++.+||=||=|.=.++..|++.++....+++.-.+.. +.+ + .++.++....- .++.++. .| .-...
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~-~---~a~~~~~~~~~~~~v~~~~-~d-~~~~~ 114 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTL-G---QAWNHLLAGPLGDRLTVHF-NT-NLSDD 114 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCH-H---HHHHHHHTSTTGGGEEEEC-SC-CTTTC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHH-H---HHHHHHHhcCCCCceEEEE-CC-hhhhc
Confidence 356789999999999999999998764467877776642 122 1 13333322110 1233333 24 11111
Q ss_pred CCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC-----------------
Q 016441 95 HPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV----------------- 157 (389)
Q Consensus 95 ~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~----------------- 157 (389)
...+....||.|+.+.+---. .+ ...+++.++.+++++|.+.++-....
T Consensus 115 ~~~~~~~~fD~v~~~~~l~~~---~~-----------~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (275)
T 3bkx_A 115 LGPIADQHFDRVVLAHSLWYF---AS-----------ANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQG 180 (275)
T ss_dssp CGGGTTCCCSEEEEESCGGGS---SC-----------HHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHH
T ss_pred cCCCCCCCEEEEEEccchhhC---CC-----------HHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHH
Confidence 122345789999998764321 11 01366777788888999998642211
Q ss_pred ---------CCC------cccHHHHHhhCCcEEEEEeeC
Q 016441 158 ---------PFS------NWNIKELAIGSSLSLIWCSEF 181 (389)
Q Consensus 158 ---------PY~------sWnIe~LAa~aGL~L~~~~~F 181 (389)
+.. .=.+.++++++||.+++...+
T Consensus 181 ~~~~~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 181 LLYAIAPSDVANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp HHHHHSCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred HHhhccccccccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 111 126677888999999998887
No 60
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=96.59 E-value=0.0075 Score=52.92 Aligned_cols=135 Identities=16% Similarity=0.164 Sum_probs=87.7
Q ss_pred cccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCC
Q 016441 17 WIKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHP 96 (389)
Q Consensus 17 ~~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~ 96 (389)
.+..+.+..+||=||=|.=.++..|++. +..|-.+++.+. +. +.++.++. .|+..+.
T Consensus 41 ~l~~~~~~~~vLDiG~G~G~~~~~l~~~---------~~vD~s~~~~~~---a~-------~~~~~~~~-~d~~~~~--- 97 (219)
T 1vlm_A 41 AVKCLLPEGRGVEIGVGTGRFAVPLKIK---------IGVEPSERMAEI---AR-------KRGVFVLK-GTAENLP--- 97 (219)
T ss_dssp HHHHHCCSSCEEEETCTTSTTHHHHTCC---------EEEESCHHHHHH---HH-------HTTCEEEE-CBTTBCC---
T ss_pred HHHHhCCCCcEEEeCCCCCHHHHHHHHH---------hccCCCHHHHHH---HH-------hcCCEEEE-cccccCC---
Confidence 3444445789999999888888887643 666644443332 22 22666554 4777653
Q ss_pred CcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC-------------------
Q 016441 97 DLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV------------------- 157 (389)
Q Consensus 97 ~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~------------------- 157 (389)
+....||.|+.+..---. ++ ...+++.+..+|+++|.+.++.....
T Consensus 98 -~~~~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (219)
T 1vlm_A 98 -LKDESFDFALMVTTICFV---DD-----------PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKN 162 (219)
T ss_dssp -SCTTCEEEEEEESCGGGS---SC-----------HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTT
T ss_pred -CCCCCeeEEEEcchHhhc---cC-----------HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcc
Confidence 345789999998642211 11 24688889999999999999854321
Q ss_pred --CCCcccHHHHHhhCCcEEEEEeeCCCCCCCCCcc
Q 016441 158 --PFSNWNIKELAIGSSLSLIWCSEFKIEDYPAYNN 191 (389)
Q Consensus 158 --PY~sWnIe~LAa~aGL~L~~~~~F~~~~YPGY~h 191 (389)
.++.-.+.++.+++||..++..... ..|.|..
T Consensus 163 ~~~~~~~~l~~~l~~~Gf~~~~~~~~~--~~~p~~~ 196 (219)
T 1vlm_A 163 ARFFSTEELMDLMRKAGFEEFKVVQTL--FKHPSEL 196 (219)
T ss_dssp CCCCCHHHHHHHHHHTTCEEEEEEEEC--CSCGGGC
T ss_pred cccCCHHHHHHHHHHCCCeEEEEeccc--CCCCCcc
Confidence 1344567778999999998876554 2355554
No 61
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=96.58 E-value=0.0021 Score=62.15 Aligned_cols=141 Identities=17% Similarity=0.071 Sum_probs=86.0
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEeccccCCCCCCCCcCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG--TCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G--v~VlfgVDATkL~~~~~Lk~ 100 (389)
+..+||=+|=|.=.|++.+|+. + ..| |+.|......+ .+++|++...-.+ +. +..-|+.++........
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~-g--a~V--~~VD~s~~al~---~a~~n~~~~gl~~~~v~-~i~~D~~~~l~~~~~~~ 223 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAA-G--AEV--THVDASKKAIG---WAKENQVLAGLEQAPIR-WICEDAMKFIQREERRG 223 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT-T--CEE--EEECSCHHHHH---HHHHHHHHHTCTTSCEE-EECSCHHHHHHHHHHHT
T ss_pred CCCcEEEcccccCHHHHHHHHc-C--CEE--EEEECCHHHHH---HHHHHHHHcCCCccceE-EEECcHHHHHHHHHhcC
Confidence 4679999999998999999874 2 344 45564444443 3677776653222 33 34447665321100014
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcc----cHHHHHhhCCcEEE
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNW----NIKELAIGSSLSLI 176 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sW----nIe~LAa~aGL~L~ 176 (389)
.+||.||.|-|-.+. ++... +....+.+..++..|..+|+++|.+.++.......+.- -+.+.++++|..+.
T Consensus 224 ~~fD~Ii~dPP~~~~-~~~~~---~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 224 STYDIILTDPPKFGR-GTHGE---VWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CCBSEEEECCCSEEE-CTTCC---EEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred CCceEEEECCccccC-CchHH---HHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 689999999997663 21110 11233456788999999999999977776554333321 23335557888775
No 62
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=96.56 E-value=0.0027 Score=62.60 Aligned_cols=137 Identities=18% Similarity=0.205 Sum_probs=89.7
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
+..+||=+|=|.=.++..|++. +..|++.-.+ +...+ .++.|++... ..+.++ .-|+.++.. ....
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis--~~al~---~A~~n~~~~~-~~v~~~-~~D~~~~~~----~~~~ 298 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM---GAEVVGVEDD--LASVL---SLQKGLEANA-LKAQAL-HSDVDEALT----EEAR 298 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT---TCEEEEEESB--HHHHH---HHHHHHHHTT-CCCEEE-ECSTTTTSC----TTCC
T ss_pred CCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECC--HHHHH---HHHHHHHHcC-CCeEEE-Ecchhhccc----cCCC
Confidence 5679999999999999999986 2466665444 33332 2566665432 234444 357666432 2478
Q ss_pred cceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcc------cHHHHHhhCCcEEE
Q 016441 103 FDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNW------NIKELAIGSSLSLI 176 (389)
Q Consensus 103 FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sW------nIe~LAa~aGL~L~ 176 (389)
||.|+.|.|-... +.. .......|++.+..+|+++|.+.|......+|..| +++.+ +..||++.
T Consensus 299 fD~Ii~npp~~~~-~~~--------~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f~~v~~l-~~~gF~Vl 368 (381)
T 3dmg_A 299 FDIIVTNPPFHVG-GAV--------ILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFGAFQTL-KVAEYKVL 368 (381)
T ss_dssp EEEEEECCCCCTT-CSS--------CCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHHSCCEEE-EESSSEEE
T ss_pred eEEEEECCchhhc-ccc--------cHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhhccEEEE-eCCCEEEE
Confidence 9999999986542 111 12356789999999999999999987776666443 23334 66778777
Q ss_pred EEeeCCC
Q 016441 177 WCSEFKI 183 (389)
Q Consensus 177 ~~~~F~~ 183 (389)
+......
T Consensus 369 ~a~~~~~ 375 (381)
T 3dmg_A 369 FAEKRGR 375 (381)
T ss_dssp EEECC--
T ss_pred EEEEecc
Confidence 7655443
No 63
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=96.56 E-value=0.012 Score=52.18 Aligned_cols=137 Identities=14% Similarity=0.007 Sum_probs=86.2
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeccccCCCCCCCCcC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL-GTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~-Gv~VlfgVDATkL~~~~~Lk 99 (389)
..+..+||=||=|.=.++..|++.++ ..+++ .|-.+++.+ .++.+++...-. .+.+ ...|+.++..
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~--~~v~g--vD~s~~~l~---~a~~~~~~~~~~~~v~~-~~~d~~~~~~----- 100 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHG--ITGTG--IDMSSLFTA---QAKRRAEELGVSERVHF-IHNDAAGYVA----- 100 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTC--CEEEE--EESCHHHHH---HHHHHHHHTTCTTTEEE-EESCCTTCCC-----
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcC--CeEEE--EeCCHHHHH---HHHHHHHhcCCCcceEE-EECChHhCCc-----
Confidence 45678999999999999999998873 45655 453333333 244444332111 2333 3457777542
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC--CCC-----------------CC
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT--TVP-----------------FS 160 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~--g~P-----------------Y~ 160 (389)
...||.|+.+..---. .+ ...+++.+..+|+|||.+.|+-.. ..| ++
T Consensus 101 ~~~fD~V~~~~~~~~~---~~-----------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (256)
T 1nkv_A 101 NEKCDVAACVGATWIA---GG-----------FAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLT 166 (256)
T ss_dssp SSCEEEEEEESCGGGT---SS-----------SHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCC
T ss_pred CCCCCEEEECCChHhc---CC-----------HHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCC
Confidence 4679999985432111 11 357888899999999999987421 111 12
Q ss_pred cccHHHHHhhCCcEEEEEeeCCCC
Q 016441 161 NWNIKELAIGSSLSLIWCSEFKIE 184 (389)
Q Consensus 161 sWnIe~LAa~aGL~L~~~~~F~~~ 184 (389)
.-.+.++.+++||..++....+..
T Consensus 167 ~~~~~~~l~~aGf~~~~~~~~~~~ 190 (256)
T 1nkv_A 167 LPGLVGAFDDLGYDVVEMVLADQE 190 (256)
T ss_dssp HHHHHHHHHTTTBCCCEEEECCHH
T ss_pred HHHHHHHHHHCCCeeEEEEeCCHH
Confidence 235677888999998876554433
No 64
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=96.55 E-value=0.021 Score=47.68 Aligned_cols=108 Identities=21% Similarity=0.291 Sum_probs=72.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEeccccCCCCCCCCcC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG--TCILHGVDATTMELHPDLR 99 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G--v~VlfgVDATkL~~~~~Lk 99 (389)
.+..+||=+|=|.=.++..|++. +.+++++-.+. +..+ .++.++....-.+ +.+ ...|+.+. +.
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~--~~~~---~a~~~~~~~~~~~~~~~~-~~~d~~~~-----~~ 116 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE---VKSTTMADINR--RAIK---LAKENIKLNNLDNYDIRV-VHSDLYEN-----VK 116 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCH--HHHH---HHHHHHHHTTCTTSCEEE-EECSTTTT-----CT
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCH--HHHH---HHHHHHHHcCCCccceEE-EECchhcc-----cc
Confidence 36779999999999999999876 35677765553 2222 2445554332222 333 34466552 22
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT 156 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 156 (389)
...||.|+.|.|.... ...+..+++.+..+|+++|.+.++....
T Consensus 117 ~~~~D~v~~~~~~~~~-------------~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 117 DRKYNKIITNPPIRAG-------------KEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp TSCEEEEEECCCSTTC-------------HHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred cCCceEEEECCCcccc-------------hhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 4679999999885421 1235688999999999999999998765
No 65
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=96.54 E-value=0.0076 Score=51.51 Aligned_cols=129 Identities=19% Similarity=0.178 Sum_probs=81.5
Q ss_pred eEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCCcce
Q 016441 26 QILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRKFDR 105 (389)
Q Consensus 26 rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~FDr 105 (389)
+||=||=|.=.++..|++. .+..+++ .|-..++.+ .++.++....-.+-.-....|+.++. +....||.
T Consensus 46 ~vLdiG~G~G~~~~~l~~~--~~~~v~~--~D~s~~~~~---~a~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~ 114 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQ--SDFSIRA--LDFSKHMNE---IALKNIADANLNDRIQIVQGDVHNIP----IEDNYADL 114 (219)
T ss_dssp EEEEETCTTSHHHHHHHHH--SEEEEEE--EESCHHHHH---HHHHHHHHTTCTTTEEEEECBTTBCS----SCTTCEEE
T ss_pred EEEEECCCCCHHHHHHHHc--CCCeEEE--EECCHHHHH---HHHHHHHhccccCceEEEEcCHHHCC----CCcccccE
Confidence 8999999999999999987 2335555 453333333 24555544332222334556777754 34578999
Q ss_pred EEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCC-------------CCcc----------
Q 016441 106 IIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVP-------------FSNW---------- 162 (389)
Q Consensus 106 IIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P-------------Y~sW---------- 162 (389)
|+.+...--. ++ ...+++.+..+|+|+|.+.|+-..+.+ +..|
T Consensus 115 v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (219)
T 3dlc_A 115 IVSRGSVFFW---ED-----------VATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQ 180 (219)
T ss_dssp EEEESCGGGC---SC-----------HHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSH
T ss_pred EEECchHhhc---cC-----------HHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhcccc
Confidence 9998742221 11 346888999999999999997432211 1112
Q ss_pred ----cHHHHHhhCCcEEEEEe
Q 016441 163 ----NIKELAIGSSLSLIWCS 179 (389)
Q Consensus 163 ----nIe~LAa~aGL~L~~~~ 179 (389)
.+.++.+++||..++..
T Consensus 181 ~~~~~~~~~l~~aGf~~v~~~ 201 (219)
T 3dlc_A 181 ENVERFQNVLDEIGISSYEII 201 (219)
T ss_dssp HHHHHHHHHHHHHTCSSEEEE
T ss_pred CCHHHHHHHHHHcCCCeEEEE
Confidence 34567788899877764
No 66
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=96.53 E-value=0.012 Score=53.32 Aligned_cols=128 Identities=19% Similarity=0.166 Sum_probs=82.9
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH-H--hCCCEEEeccccCCCCCCCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNL-K--KLGTCILHGVDATTMELHPD 97 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~L-r--~~Gv~VlfgVDATkL~~~~~ 97 (389)
..+..+||-+|=|.=+++.+|++..+....+++.-.+ ++..+ .+++|++.. . ...+.+ ...|+.++.
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~g~~~~~v~~-~~~d~~~~~---- 166 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQR--ADHAE---HARRNVSGCYGQPPDNWRL-VVSDLADSE---- 166 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSC--HHHHH---HHHHHHHHHHTSCCTTEEE-ECSCGGGCC----
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCC--HHHHH---HHHHHHHHhcCCCCCcEEE-EECchHhcC----
Confidence 4567799999999999999999987655567665543 33332 366676654 2 123444 345777652
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHH-HHHhhCCcEEE
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIK-ELAIGSSLSLI 176 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe-~LAa~aGL~L~ 176 (389)
+....||.|+.|.|+.- .++..+..+|+++|.+.+...+.. ....+. .+.+..++...
T Consensus 167 ~~~~~~D~v~~~~~~~~-------------------~~l~~~~~~L~pgG~l~~~~~~~~--~~~~~~~~l~~~~~f~~~ 225 (280)
T 1i9g_A 167 LPDGSVDRAVLDMLAPW-------------------EVLDAVSRLLVAGGVLMVYVATVT--QLSRIVEALRAKQCWTEP 225 (280)
T ss_dssp CCTTCEEEEEEESSCGG-------------------GGHHHHHHHEEEEEEEEEEESSHH--HHHHHHHHHHHHSSBCCC
T ss_pred CCCCceeEEEECCcCHH-------------------HHHHHHHHhCCCCCEEEEEeCCHH--HHHHHHHHHHhcCCcCCc
Confidence 33467999999877331 568889999999999999875432 112222 23333666555
Q ss_pred EEe
Q 016441 177 WCS 179 (389)
Q Consensus 177 ~~~ 179 (389)
+..
T Consensus 226 ~~~ 228 (280)
T 1i9g_A 226 RAW 228 (280)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 67
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=96.51 E-value=0.0031 Score=57.60 Aligned_cols=137 Identities=14% Similarity=0.196 Sum_probs=87.1
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh---C---CCEEEeccccCC-CCCCC
Q 016441 24 NHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK---L---GTCILHGVDATT-MELHP 96 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~---~---Gv~VlfgVDATk-L~~~~ 96 (389)
..+||=||=|.=.|+..||+.+. ..++++.-.. +.+.+ .|.++++.|+. . ++.+ ...||.+ |...
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis--~~~l~---~A~~~~~~l~~~~~~~~~nv~~-~~~d~~~~l~~~- 118 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFP-DTLILGLEIR--VKVSD---YVQDRIRALRAAPAGGFQNIAC-LRSNAMKHLPNF- 118 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGST-TSEEEEEESC--HHHHH---HHHHHHHHHHHSTTCCCTTEEE-EECCTTTCHHHH-
T ss_pred CCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECC--HHHHH---HHHHHHHHHHHHHhcCCCeEEE-EECcHHHhhhhh-
Confidence 45799999999999999998763 4567765443 33333 36777777753 2 2333 4457765 3211
Q ss_pred CcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEE
Q 016441 97 DLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLI 176 (389)
Q Consensus 97 ~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~ 176 (389)
+....||+|+++||-.-.+-+. .+.|.+...|++.+..+|++||.++++... ..|-.|-++.+.+..++...
T Consensus 119 -~~~~~~D~v~~~~~dp~~k~~h------~krr~~~~~~l~~~~~~LkpGG~l~~~td~-~~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 119 -FYKGQLTKMFFLFPDPHFKRTK------HKWRIISPTLLAEYAYVLRVGGLVYTITDV-LELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp -CCTTCEEEEEEESCC-----------------CCCHHHHHHHHHHEEEEEEEEEEESC-HHHHHHHHHHHHTSTTEEEE
T ss_pred -CCCcCeeEEEEeCCCchhhhhh------hhhhhhhHHHHHHHHHHCCCCCEEEEEeCC-HHHHHHHHHHHHHCCCcccc
Confidence 3456799999999854331110 112223467899999999999999988654 34777888888776655443
No 68
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=96.49 E-value=0.0064 Score=59.22 Aligned_cols=148 Identities=14% Similarity=0.046 Sum_probs=93.5
Q ss_pred ccccCCC-CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeccccCCCC
Q 016441 16 KWIKHYS-SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL-GTCILHGVDATTME 93 (389)
Q Consensus 16 K~~~~Ys-s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~-Gv~VlfgVDATkL~ 93 (389)
+++..+. ++.+||=+|=|.=.||+.||+. | ...++|.-.+ .+.+ + .++.|++...-. ++.+ ..-|+.++.
T Consensus 209 ~~~~~~~~~~~~VLDl~~G~G~~~~~la~~-g-~~~v~~vD~s-~~~l-~---~a~~n~~~n~~~~~v~~-~~~d~~~~~ 280 (396)
T 2as0_A 209 LALEKWVQPGDRVLDVFTYTGGFAIHAAIA-G-ADEVIGIDKS-PRAI-E---TAKENAKLNGVEDRMKF-IVGSAFEEM 280 (396)
T ss_dssp HHHGGGCCTTCEEEETTCTTTHHHHHHHHT-T-CSEEEEEESC-HHHH-H---HHHHHHHHTTCGGGEEE-EESCHHHHH
T ss_pred HHHHHHhhCCCeEEEecCCCCHHHHHHHHC-C-CCEEEEEeCC-HHHH-H---HHHHHHHHcCCCccceE-EECCHHHHH
Confidence 4444455 7889999999999999999875 3 4467776554 2222 2 356666542111 2333 334665532
Q ss_pred CCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCC-Ccc-c-HHHHHhh
Q 016441 94 LHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPF-SNW-N-IKELAIG 170 (389)
Q Consensus 94 ~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY-~sW-n-Ie~LAa~ 170 (389)
....-...+||.||.|-|..+. ++. .+.........++..+..+|+++|.+.++.+....- +.| + +.+.+.+
T Consensus 281 ~~~~~~~~~fD~Vi~dpP~~~~-~~~----~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~ 355 (396)
T 2as0_A 281 EKLQKKGEKFDIVVLDPPAFVQ-HEK----DLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAK 355 (396)
T ss_dssp HHHHHTTCCEEEEEECCCCSCS-SGG----GHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCCEEEECCCCCCC-CHH----HHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 1100024689999999998774 332 244556677889999999999999999998876532 112 2 3346667
Q ss_pred CCcEEE
Q 016441 171 SSLSLI 176 (389)
Q Consensus 171 aGL~L~ 176 (389)
.|..+.
T Consensus 356 ~~~~~~ 361 (396)
T 2as0_A 356 AGKFLK 361 (396)
T ss_dssp TTEEEE
T ss_pred cCCeEE
Confidence 776554
No 69
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=96.48 E-value=0.013 Score=54.05 Aligned_cols=135 Identities=13% Similarity=0.162 Sum_probs=87.1
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh---CCCEEEeccccCCCCCCCCcCC
Q 016441 24 NHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK---LGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~---~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
..+||=||=|.=.++..|++. +.++++.-++ .++.+ .+++++..... ..+. +..-|+.++.. .
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s--~~~~~---~a~~~~~~~~~~~~~~v~-~~~~d~~~~~~-----~ 148 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDL---GWEVTALELS--TSVLA---AFRKRLAEAPADVRDRCT-LVQGDMSAFAL-----D 148 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTT---TCCEEEEESC--HHHHH---HHHHHHHTSCHHHHTTEE-EEECBTTBCCC-----S
T ss_pred CCcEEEEeccCCHHHHHHHHc---CCeEEEEECC--HHHHH---HHHHHHhhcccccccceE-EEeCchhcCCc-----C
Confidence 348999999999999999986 3467666544 23332 13333332110 2233 34557777642 4
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCC----------------------
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVP---------------------- 158 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P---------------------- 158 (389)
..||.||+.+.-... ...+-+..+++.+..+|+|+|.+.|+......
T Consensus 149 ~~fD~v~~~~~~~~~-----------~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 217 (299)
T 3g2m_A 149 KRFGTVVISSGSINE-----------LDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVL 217 (299)
T ss_dssp CCEEEEEECHHHHTT-----------SCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------C
T ss_pred CCcCEEEECCccccc-----------CCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEE
Confidence 789999865321111 01233568899999999999999998754310
Q ss_pred ----------------------------------CCcccHHHHHhhCCcEEEEEeeCCC
Q 016441 159 ----------------------------------FSNWNIKELAIGSSLSLIWCSEFKI 183 (389)
Q Consensus 159 ----------------------------------Y~sWnIe~LAa~aGL~L~~~~~F~~ 183 (389)
|+.-.++.+.+++||.+++..+|..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~ 276 (299)
T 3g2m_A 218 HVRHLPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFAS 276 (299)
T ss_dssp CEEEEEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECT
T ss_pred EEEEeccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCC
Confidence 2334577899999999999988763
No 70
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=96.47 E-value=0.063 Score=45.96 Aligned_cols=108 Identities=16% Similarity=0.191 Sum_probs=71.0
Q ss_pred ccccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEeccccCCCC
Q 016441 16 KWIKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG--TCILHGVDATTME 93 (389)
Q Consensus 16 K~~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G--v~VlfgVDATkL~ 93 (389)
+++....+..+||=||=|.=.++..|++. +..+++.-.+ .++.+ ..++.| -.-+...|+.++
T Consensus 39 ~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s--~~~~~----------~a~~~~~~~~~~~~~d~~~~- 102 (218)
T 3ou2_A 39 ERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGS--AEMIA----------EAGRHGLDNVEFRQQDLFDW- 102 (218)
T ss_dssp HHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESC--HHHHH----------HHGGGCCTTEEEEECCTTSC-
T ss_pred HHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCC--HHHHH----------HHHhcCCCCeEEEecccccC-
Confidence 45566777889999999999999999987 3466655443 22222 222223 123344577765
Q ss_pred CCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC
Q 016441 94 LHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT 155 (389)
Q Consensus 94 ~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 155 (389)
+....||.|+.++----. ....+..+++.+..+|+++|.+.++...
T Consensus 103 ----~~~~~~D~v~~~~~l~~~------------~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 103 ----TPDRQWDAVFFAHWLAHV------------PDDRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp ----CCSSCEEEEEEESCGGGS------------CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ----CCCCceeEEEEechhhcC------------CHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 345789999998621111 1234568899999999999999888543
No 71
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=96.47 E-value=0.0048 Score=60.53 Aligned_cols=159 Identities=11% Similarity=0.015 Sum_probs=95.3
Q ss_pred cccccCC-CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC--CCEEEeccccCC
Q 016441 15 EKWIKHY-SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL--GTCILHGVDATT 91 (389)
Q Consensus 15 ~K~~~~Y-ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~--Gv~VlfgVDATk 91 (389)
.+++..+ ..+.+||=+|=|.=.||+.+|+. + +..+++.-.+. +..+ .|+.|++...-. .+.+ ..-||.+
T Consensus 203 ~~~~~~~~~~~~~VLDl~cGtG~~sl~la~~-g-a~~V~~vD~s~--~al~---~A~~N~~~n~~~~~~v~~-~~~D~~~ 274 (385)
T 2b78_A 203 RNELINGSAAGKTVLNLFSYTAAFSVAAAMG-G-AMATTSVDLAK--RSRA---LSLAHFEANHLDMANHQL-VVMDVFD 274 (385)
T ss_dssp HHHHHHTTTBTCEEEEETCTTTHHHHHHHHT-T-BSEEEEEESCT--THHH---HHHHHHHHTTCCCTTEEE-EESCHHH
T ss_pred HHHHHHHhcCCCeEEEEeeccCHHHHHHHHC-C-CCEEEEEECCH--HHHH---HHHHHHHHcCCCccceEE-EECCHHH
Confidence 4555555 77889999999988999999874 2 34566654443 2222 366676543211 2333 4447655
Q ss_pred CCCCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCC--CcccHH-HHH
Q 016441 92 MELHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPF--SNWNIK-ELA 168 (389)
Q Consensus 92 L~~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY--~sWnIe-~LA 168 (389)
.-....-.+.+||.||.|-|-.+. ++... ..-.+.+..++..|..+|+|+|.+.++.+....- ..|++. +.|
T Consensus 275 ~l~~~~~~~~~fD~Ii~DPP~~~~-~~~~~----~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~ 349 (385)
T 2b78_A 275 YFKYARRHHLTYDIIIIDPPSFAR-NKKEV----FSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGF 349 (385)
T ss_dssp HHHHHHHTTCCEEEEEECCCCC------CC----CCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCccEEEECCCCCCC-ChhhH----HHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHH
Confidence 211100124589999999998752 21111 1123345667888999999999999998766431 123443 466
Q ss_pred hhCCcEEEEEeeCCCCCCC
Q 016441 169 IGSSLSLIWCSEFKIEDYP 187 (389)
Q Consensus 169 a~aGL~L~~~~~F~~~~YP 187 (389)
+++|..+++ ..-.+.|+|
T Consensus 350 ~~~g~~~~~-~~~~~~D~p 367 (385)
T 2b78_A 350 GKQKHTYLD-LQQLPSDFA 367 (385)
T ss_dssp TTCCCEEEE-EECCCTTSC
T ss_pred HHcCCcEEE-eCCCCCCCC
Confidence 778888443 455666676
No 72
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.46 E-value=0.046 Score=47.88 Aligned_cols=113 Identities=15% Similarity=0.234 Sum_probs=72.2
Q ss_pred ccccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC
Q 016441 16 KWIKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH 95 (389)
Q Consensus 16 K~~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~ 95 (389)
+++....+..+||=||=|.=.++..|++.+. +..+++.-.+ +.+.+. +++++ +..+-.-+...|+.++..
T Consensus 37 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s--~~~~~~---a~~~~---~~~~~~~~~~~d~~~~~~- 106 (234)
T 3dtn_A 37 SIASVDTENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMS--EKMLEI---AKNRF---RGNLKVKYIEADYSKYDF- 106 (234)
T ss_dssp HTCCCSCSSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESC--HHHHHH---HHHHT---CSCTTEEEEESCTTTCCC-
T ss_pred HHhhcCCCCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECC--HHHHHH---HHHhh---ccCCCEEEEeCchhccCC-
Confidence 3444456778999999999999999998862 4566665443 222221 33332 223322334557777643
Q ss_pred CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEec
Q 016441 96 PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHK 154 (389)
Q Consensus 96 ~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk 154 (389)
. ..||.|+.++.---. .+ .-...+++.+..+|+|+|.+.++-.
T Consensus 107 ---~-~~fD~v~~~~~l~~~---~~---------~~~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 107 ---E-EKYDMVVSALSIHHL---ED---------EDKKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp ---C-SCEEEEEEESCGGGS---CH---------HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---C-CCceEEEEeCccccC---CH---------HHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 2 789999998653322 11 1234688889999999999998753
No 73
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=96.46 E-value=0.011 Score=54.46 Aligned_cols=135 Identities=13% Similarity=0.031 Sum_probs=90.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
....+||=||=|.=..+..||..++ ...| |..|..+...+ -++.|++.+.-.+++++++ |+.++.... ....
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~-~~~v--~~vD~s~~~~~---~a~~~~~~~~l~~v~~~~~-d~~~~~~~~-~~~~ 150 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRP-ELEL--VLVDATRKKVA---FVERAIEVLGLKGARALWG-RAEVLAREA-GHRE 150 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCT-TCEE--EEEESCHHHHH---HHHHHHHHHTCSSEEEEEC-CHHHHTTST-TTTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCC-CCEE--EEEECCHHHHH---HHHHHHHHhCCCceEEEEC-cHHHhhccc-ccCC
Confidence 4678999999999999999998763 3455 45564444443 3778888776445666554 777664321 1236
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEEeeC
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWCSEF 181 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~~F 181 (389)
.||.|+.+- +. + +..++..+..+|+++|.+.+.......-..-.+...++..|+.+.+..++
T Consensus 151 ~fD~I~s~a--~~-----~-----------~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 151 AYARAVARA--VA-----P-----------LCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLAL 212 (249)
T ss_dssp CEEEEEEES--SC-----C-----------HHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEE
T ss_pred CceEEEECC--cC-----C-----------HHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEe
Confidence 799999862 11 1 35788899999999999876542211112234556667789999998887
Q ss_pred C
Q 016441 182 K 182 (389)
Q Consensus 182 ~ 182 (389)
.
T Consensus 213 ~ 213 (249)
T 3g89_A 213 Q 213 (249)
T ss_dssp E
T ss_pred e
Confidence 4
No 74
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.46 E-value=0.0047 Score=51.97 Aligned_cols=123 Identities=15% Similarity=0.116 Sum_probs=73.8
Q ss_pred cccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCCC
Q 016441 17 WIKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMELH 95 (389)
Q Consensus 17 ~~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~~ 95 (389)
++....++.+||=+|=|.=.++..+++. + ...+++.-.+. ++.+ .++.|++...- ..+.+ +.-|+.+....
T Consensus 38 ~l~~~~~~~~vLD~GcG~G~~~~~~~~~-~-~~~v~~vD~~~--~~~~---~a~~~~~~~~~~~~~~~-~~~d~~~~~~~ 109 (187)
T 2fhp_A 38 MIGPYFDGGMALDLYSGSGGLAIEAVSR-G-MDKSICIEKNF--AALK---VIKENIAITKEPEKFEV-RKMDANRALEQ 109 (187)
T ss_dssp HHCSCCSSCEEEETTCTTCHHHHHHHHT-T-CSEEEEEESCH--HHHH---HHHHHHHHHTCGGGEEE-EESCHHHHHHH
T ss_pred HHHhhcCCCCEEEeCCccCHHHHHHHHc-C-CCEEEEEECCH--HHHH---HHHHHHHHhCCCcceEE-EECcHHHHHHH
Confidence 4445567889999999998888888873 2 35677766652 2332 35666655431 12333 44566653211
Q ss_pred CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCC
Q 016441 96 PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFS 160 (389)
Q Consensus 96 ~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~ 160 (389)
.......||.|+.|.|..- .+ ....+... .+..+|+++|.+.++........
T Consensus 110 ~~~~~~~fD~i~~~~~~~~----~~-------~~~~~~~l--~~~~~L~~gG~l~~~~~~~~~~~ 161 (187)
T 2fhp_A 110 FYEEKLQFDLVLLDPPYAK----QE-------IVSQLEKM--LERQLLTNEAVIVCETDKTVKLP 161 (187)
T ss_dssp HHHTTCCEEEEEECCCGGG----CC-------HHHHHHHH--HHTTCEEEEEEEEEEEETTCCCC
T ss_pred HHhcCCCCCEEEECCCCCc----hh-------HHHHHHHH--HHhcccCCCCEEEEEeCCccccc
Confidence 0011467999999999331 11 11122222 14789999999999988765443
No 75
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=96.40 E-value=0.0083 Score=52.64 Aligned_cols=108 Identities=13% Similarity=0.126 Sum_probs=73.1
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH-----HhCCCEEEeccccCCCCCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNL-----KKLGTCILHGVDATTMELH 95 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~L-----r~~Gv~VlfgVDATkL~~~ 95 (389)
..+..+||=||=|.=.++..|++..+....+++.-.+ +.+.+ .++.|++.. ....+.+. ..|++...
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~~~~~v~~~-~~d~~~~~-- 146 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHI--KELVD---DSVNNVRKDDPTLLSSGRVQLV-VGDGRMGY-- 146 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESC--HHHHH---HHHHHHHHHCTHHHHTSSEEEE-ESCGGGCC--
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCC--HHHHH---HHHHHHHhhcccccCCCcEEEE-ECCcccCc--
Confidence 4567899999999999999999887644567766544 33333 255565552 23345544 34776432
Q ss_pred CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCC
Q 016441 96 PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVP 158 (389)
Q Consensus 96 ~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P 158 (389)
.....||+|+.+.|... ++..+..+|+++|.+.++..+..+
T Consensus 147 --~~~~~fD~i~~~~~~~~--------------------~~~~~~~~LkpgG~lv~~~~~~~~ 187 (226)
T 1i1n_A 147 --AEEAPYDAIHVGAAAPV--------------------VPQALIDQLKPGGRLILPVGPAGG 187 (226)
T ss_dssp --GGGCCEEEEEECSBBSS--------------------CCHHHHHTEEEEEEEEEEESCTTS
T ss_pred --ccCCCcCEEEECCchHH--------------------HHHHHHHhcCCCcEEEEEEecCCC
Confidence 23467999999887532 234677899999999999987654
No 76
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=96.39 E-value=0.0042 Score=60.98 Aligned_cols=136 Identities=12% Similarity=0.156 Sum_probs=86.1
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEE-EeccccCCCCCCCCcCCC
Q 016441 24 NHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG-TCI-LHGVDATTMELHPDLRTR 101 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G-v~V-lfgVDATkL~~~~~Lk~~ 101 (389)
..+||=+|=|.=.|+..|++.. .+..|++.-.+ +.+.+ .++.|++...-.+ +.| .+.-|+.+ .+...
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s--~~al~---~Ar~n~~~ngl~~~~~v~~~~~D~~~-----~~~~~ 291 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDES--PMAVA---SSRLNVETNMPEALDRCEFMINNALS-----GVEPF 291 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESC--HHHHH---HHHHHHHHHCGGGGGGEEEEECSTTT-----TCCTT
T ss_pred CCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECc--HHHHH---HHHHHHHHcCCCcCceEEEEechhhc-----cCCCC
Confidence 3789999999999999999875 34567665544 33332 2566665532111 122 23345544 23457
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcc------cHHHHHhhCCcEE
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNW------NIKELAIGSSLSL 175 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sW------nIe~LAa~aGL~L 175 (389)
+||.|+.|.|.-..... ...+...||+.+..+|+++|.+.|......+|..| +++.+|+..||++
T Consensus 292 ~fD~Ii~nppfh~~~~~---------~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~~~fg~~~~~a~~~~F~V 362 (375)
T 4dcm_A 292 RFNAVLCNPPFHQQHAL---------TDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVV 362 (375)
T ss_dssp CEEEEEECCCC----------------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHSCCEEEEECSSEEE
T ss_pred CeeEEEECCCcccCccc---------CHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHHHhcCCEEEEeeCCCEEE
Confidence 89999999995321111 11234579999999999999999987766666543 3444566677777
Q ss_pred EEEe
Q 016441 176 IWCS 179 (389)
Q Consensus 176 ~~~~ 179 (389)
.+..
T Consensus 363 ~~~~ 366 (375)
T 4dcm_A 363 LKAV 366 (375)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 7654
No 77
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=96.38 E-value=0.018 Score=49.96 Aligned_cols=116 Identities=14% Similarity=0.199 Sum_probs=81.3
Q ss_pred cccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCC
Q 016441 17 WIKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHP 96 (389)
Q Consensus 17 ~~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~ 96 (389)
++.+..+..+||=||=|.=.++..|+ ..+++.-.+.. ++.+. ..|+.++.
T Consensus 61 ~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~--------------------~~~~~-~~d~~~~~--- 110 (215)
T 2zfu_A 61 DLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL--------------------DPRVT-VCDMAQVP--- 110 (215)
T ss_dssp HHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS--------------------STTEE-ESCTTSCS---
T ss_pred HHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC--------------------CceEE-EeccccCC---
Confidence 34455677899999999877777662 46777666543 34443 34666643
Q ss_pred CcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEE
Q 016441 97 DLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLI 176 (389)
Q Consensus 97 ~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~ 176 (389)
+....||.|+.++..- . ++ ...+++.+..+|+++|.+.|+-......+.-.+.++.+++||.++
T Consensus 111 -~~~~~fD~v~~~~~l~-~---~~-----------~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~ 174 (215)
T 2zfu_A 111 -LEDESVDVAVFCLSLM-G---TN-----------IRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIV 174 (215)
T ss_dssp -CCTTCEEEEEEESCCC-S---SC-----------HHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEE
T ss_pred -CCCCCEeEEEEehhcc-c---cC-----------HHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEE
Confidence 3457899999987642 1 22 347888899999999999997654433355678889999999988
Q ss_pred EE
Q 016441 177 WC 178 (389)
Q Consensus 177 ~~ 178 (389)
..
T Consensus 175 ~~ 176 (215)
T 2zfu_A 175 SK 176 (215)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 78
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=96.37 E-value=0.011 Score=60.42 Aligned_cols=146 Identities=14% Similarity=0.160 Sum_probs=100.0
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.++.+||=+|=|-=..|..||+..+....|+|.-.+ ....+ .+.+|++.+.-. +.++ .-|++++... ...
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis--~~~l~---~a~~n~~r~G~~-v~~~-~~Da~~l~~~---~~~ 169 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVD--GKRVR---GLLENVERWGAP-LAVT-QAPPRALAEA---FGT 169 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSC--HHHHH---HHHHHHHHHCCC-CEEE-CSCHHHHHHH---HCS
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHcCCe-EEEE-ECCHHHhhhh---ccc
Confidence 467899999999999999999887654567765444 22222 367777765433 4443 4577776421 136
Q ss_pred CcceEEEcCCCCCCCCC----cc-----chHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCC-CcccHHHHHhhC
Q 016441 102 KFDRIIFNFPHAGFYGK----ED-----NHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPF-SNWNIKELAIGS 171 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gk----ED-----~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY-~sWnIe~LAa~a 171 (389)
.||+|+.|=|..|. |. .+ ....+.....+-..++.+|..+|++||.+..+.|+-.|- +.-.|..+.++.
T Consensus 170 ~FD~Il~D~PcSg~-G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~ 248 (464)
T 3m6w_A 170 YFHRVLLDAPCSGE-GMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAH 248 (464)
T ss_dssp CEEEEEEECCCCCG-GGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred cCCEEEECCCcCCc-cccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHHC
Confidence 79999999999873 21 11 112345556677889999999999999999999987664 556666666555
Q ss_pred -CcEEEEE
Q 016441 172 -SLSLIWC 178 (389)
Q Consensus 172 -GL~L~~~ 178 (389)
++.++..
T Consensus 249 ~~~~l~~~ 256 (464)
T 3m6w_A 249 PEFRLEDA 256 (464)
T ss_dssp TTEEEECC
T ss_pred CCcEEEec
Confidence 6776653
No 79
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=96.35 E-value=0.0068 Score=54.61 Aligned_cols=139 Identities=11% Similarity=0.085 Sum_probs=89.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
...+||=||=|.=.++..||+... ..+++|.-.. .+..+ .+..|++...-.++. +...||..+-.. .+....
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s--~~~l~---~a~~~~~~~~l~nv~-~~~~Da~~~l~~-~~~~~~ 105 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVH--SPGVG---ACLASAHEEGLSNLR-VMCHDAVEVLHK-MIPDNS 105 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCT-TSEEEEECSC--HHHHH---HHHHHHHHTTCSSEE-EECSCHHHHHHH-HSCTTC
T ss_pred CCCeEEEEeeeChHHHHHHHHHCC-CCeEEEEEec--HHHHH---HHHHHHHHhCCCcEE-EEECCHHHHHHH-HcCCCC
Confidence 456899999999999999998763 4567765443 33332 255555443222333 355677764110 134578
Q ss_pred cceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEE
Q 016441 103 FDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLI 176 (389)
Q Consensus 103 FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~ 176 (389)
||.|+.|||-.-.+.... ..|.+-..|++.+..+|+|||.++|..... +|-.|-.+.+.+..++..+
T Consensus 106 ~d~v~~~~~~p~~~~~~~------~rr~~~~~~l~~~~r~LkpGG~l~i~td~~-~~~~~~~~~~~~~~~~~~~ 172 (218)
T 3dxy_A 106 LRMVQLFFPDPWHKARHN------KRRIVQVPFAELVKSKLQLGGVFHMATDWE-PYAEHMLEVMSSIDGYKNL 172 (218)
T ss_dssp EEEEEEESCCCCCSGGGG------GGSSCSHHHHHHHHHHEEEEEEEEEEESCH-HHHHHHHHHHHTSTTEEEC
T ss_pred hheEEEeCCCCccchhhh------hhhhhhHHHHHHHHHHcCCCcEEEEEeCCH-HHHHHHHHHHHhCCCcccc
Confidence 999999987553211111 112223469999999999999999886443 4777888888877776543
No 80
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=96.34 E-value=0.013 Score=52.52 Aligned_cols=135 Identities=16% Similarity=0.079 Sum_probs=86.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||=||=|.=.++..||.... +..++|. |..++..+ -++.|++.+.-.++.++.+ |+.++..... ...
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~v--D~s~~~~~---~a~~~~~~~~~~~v~~~~~-d~~~~~~~~~-~~~ 140 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFP-HLHVTIV--DSLNKRIT---FLEKLSEALQLENTTFCHD-RAETFGQRKD-VRE 140 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCT-TCEEEEE--ESCHHHHH---HHHHHHHHHTCSSEEEEES-CHHHHTTCTT-TTT
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCC-CCEEEEE--eCCHHHHH---HHHHHHHHcCCCCEEEEec-cHHHhccccc-ccC
Confidence 4678999999998888888887542 3456554 54333333 2666776664335666654 7766542111 135
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEEeeC
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWCSEF 181 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~~F 181 (389)
.||.|+.+. + .+ +..+++.+..+|+++|.+.+.......-..-.+.+..+..|+.+.+...|
T Consensus 141 ~fD~V~~~~--~-----~~-----------~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~ 202 (240)
T 1xdz_A 141 SYDIVTARA--V-----AR-----------LSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSF 202 (240)
T ss_dssp CEEEEEEEC--C-----SC-----------HHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CccEEEEec--c-----CC-----------HHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEE
Confidence 799999865 1 11 56889999999999999987632211111123445667889999887766
Q ss_pred C
Q 016441 182 K 182 (389)
Q Consensus 182 ~ 182 (389)
.
T Consensus 203 ~ 203 (240)
T 1xdz_A 203 K 203 (240)
T ss_dssp E
T ss_pred e
Confidence 4
No 81
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=96.31 E-value=0.0032 Score=60.18 Aligned_cols=132 Identities=16% Similarity=0.255 Sum_probs=83.6
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
...+||=||=|.=.++..|++.. ....+++.-.+ ..+.+ .++.|++... ..+.+ +..|+.... ...
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s--~~~l~---~a~~~~~~~~-~~~~~-~~~d~~~~~------~~~ 261 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVS--APAVE---ASRATLAANG-VEGEV-FASNVFSEV------KGR 261 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESB--HHHHH---HHHHHHHHTT-CCCEE-EECSTTTTC------CSC
T ss_pred CCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECC--HHHHH---HHHHHHHHhC-CCCEE-EEccccccc------cCC
Confidence 35689999999999999998874 23356554433 33332 2555554321 22444 445554421 467
Q ss_pred cceEEEcCCCC-CCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcc------cHHHHHhhCCcEE
Q 016441 103 FDRIIFNFPHA-GFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNW------NIKELAIGSSLSL 175 (389)
Q Consensus 103 FDrIIFNFPH~-G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sW------nIe~LAa~aGL~L 175 (389)
||.|+.|.|.- |. ..+......|++.+..+|+++|.+.|......||..| +++.+++..|+++
T Consensus 262 fD~Iv~~~~~~~g~----------~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f~~~~~~~~~~gf~v 331 (343)
T 2pjd_A 262 FDMIISNPPFHDGM----------QTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQTGRFKV 331 (343)
T ss_dssp EEEEEECCCCCSSS----------HHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHHSCCEEEEECSSEEE
T ss_pred eeEEEECCCcccCc----------cCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhcCceEEEeeCCCEEE
Confidence 99999999943 32 2344567899999999999999999988777665432 1222444555555
Q ss_pred EEE
Q 016441 176 IWC 178 (389)
Q Consensus 176 ~~~ 178 (389)
.+.
T Consensus 332 ~~~ 334 (343)
T 2pjd_A 332 YRA 334 (343)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 82
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=96.29 E-value=0.0031 Score=61.53 Aligned_cols=159 Identities=18% Similarity=0.145 Sum_probs=96.2
Q ss_pred cccccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-C-CCEEEeccccCCC
Q 016441 15 EKWIKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-L-GTCILHGVDATTM 92 (389)
Q Consensus 15 ~K~~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~-Gv~VlfgVDATkL 92 (389)
.+++..+.++.+||=+|=|.=.||+.+|+. | +..++|.-.+ ++..+ .++.|++...- . .+.+ ..-|+.++
T Consensus 212 ~~~l~~~~~~~~VLDl~cG~G~~sl~la~~-g-~~~V~~vD~s--~~al~---~a~~n~~~ngl~~~~v~~-~~~D~~~~ 283 (396)
T 3c0k_A 212 RLATRRYVENKRVLNCFSYTGGFAVSALMG-G-CSQVVSVDTS--QEALD---IARQNVELNKLDLSKAEF-VRDDVFKL 283 (396)
T ss_dssp HHHHHHHCTTCEEEEESCTTCSHHHHHHHT-T-CSEEEEEESC--HHHHH---HHHHHHHHTTCCGGGEEE-EESCHHHH
T ss_pred HHHHHHhhCCCeEEEeeccCCHHHHHHHHC-C-CCEEEEEECC--HHHHH---HHHHHHHHcCCCccceEE-EECCHHHH
Confidence 455666678889999998888899999875 2 3466665544 22332 35667654321 1 2333 34477654
Q ss_pred CCCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCC-Cc-cc-HHHHHh
Q 016441 93 ELHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPF-SN-WN-IKELAI 169 (389)
Q Consensus 93 ~~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY-~s-Wn-Ie~LAa 169 (389)
-....-...+||.||.|-|-.+. ++.+ +......+..++..+..+|+++|.+.++.+....- +. .+ +.+.+.
T Consensus 284 ~~~~~~~~~~fD~Ii~dpP~~~~-~~~~----~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~ 358 (396)
T 3c0k_A 284 LRTYRDRGEKFDVIVMDPPKFVE-NKSQ----LMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAI 358 (396)
T ss_dssp HHHHHHTTCCEEEEEECCSSTTT-CSSS----SSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCEEEECCCCCCC-ChhH----HHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHH
Confidence 21100014689999999998774 3221 12223456688899999999999999998876532 12 22 233556
Q ss_pred hCC--cEEEEEeeCCCCCCC
Q 016441 170 GSS--LSLIWCSEFKIEDYP 187 (389)
Q Consensus 170 ~aG--L~L~~~~~F~~~~YP 187 (389)
++| +.++... -.+.+||
T Consensus 359 ~~g~~~~~i~~~-~~~~d~p 377 (396)
T 3c0k_A 359 DAGRDVQFIEQF-RQAADHP 377 (396)
T ss_dssp HHTCCEEEEEEE-ECCTTSC
T ss_pred HcCCeEEEEEEC-CCCCCCC
Confidence 666 4555433 2445555
No 83
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=96.28 E-value=0.098 Score=48.47 Aligned_cols=137 Identities=12% Similarity=0.090 Sum_probs=86.2
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHH--HHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCc
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYD--DVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDL 98 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSee--eL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~L 98 (389)
..++++||=+|=|.=.++..||+..+....|+|.-+.... .+.+ .++ +..++.++. -||+.......+
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~---~a~------~r~nv~~i~-~Da~~~~~~~~~ 143 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLL---VAQ------RRPNIFPLL-ADARFPQSYKSV 143 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHH---HHH------HCTTEEEEE-CCTTCGGGTTTT
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHH---Hhh------hcCCeEEEE-cccccchhhhcc
Confidence 4578999999999999999999887655577776554221 1111 111 123555544 588875432222
Q ss_pred CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC------CCCcc-cHHHHHhhC
Q 016441 99 RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV------PFSNW-NIKELAIGS 171 (389)
Q Consensus 99 k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~------PY~sW-nIe~LAa~a 171 (389)
...||+|+.|.|+. ++ ..-+...+..+|++||.+.++++.+. |...- ++++..+++
T Consensus 144 -~~~~D~I~~d~a~~------~~----------~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~ 206 (232)
T 3id6_C 144 -VENVDVLYVDIAQP------DQ----------TDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENS 206 (232)
T ss_dssp -CCCEEEEEECCCCT------TH----------HHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHT
T ss_pred -ccceEEEEecCCCh------hH----------HHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHC
Confidence 35799999998862 11 11234567778999999999976542 33222 344444567
Q ss_pred CcEEEEEeeCCCC
Q 016441 172 SLSLIWCSEFKIE 184 (389)
Q Consensus 172 GL~L~~~~~F~~~ 184 (389)
||.+.+.....|-
T Consensus 207 gf~~~~~~~l~p~ 219 (232)
T 3id6_C 207 NFETIQIINLDPY 219 (232)
T ss_dssp TEEEEEEEECTTT
T ss_pred CCEEEEEeccCCC
Confidence 9999998876544
No 84
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=96.28 E-value=0.044 Score=50.85 Aligned_cols=135 Identities=13% Similarity=0.086 Sum_probs=84.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeccccCCCCCCCCcCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL-GTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~-Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
.+..+||=||=|.=.++..|++.+. ...++++ |-. .+.+ .+++++....-. .+++. ..|+.++. +.
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~--D~~-~~~~---~a~~~~~~~~~~~~v~~~-~~d~~~~~----~~- 230 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNP-NAEIFGV--DWA-SVLE---VAKENARIQGVASRYHTI-AGSAFEVD----YG- 230 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEE--ECH-HHHH---HHHHHHHHHTCGGGEEEE-ESCTTTSC----CC-
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEE--ecH-HHHH---HHHHHHHhcCCCcceEEE-ecccccCC----CC-
Confidence 6678999999999999999999873 3455555 543 4443 255555543211 24433 34666542 22
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC------------------------
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT------------------------ 156 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g------------------------ 156 (389)
..||.|+.+..--.. . ..-...+++.+..+|+|+|.+.|.-...
T Consensus 231 ~~~D~v~~~~~l~~~-~-----------~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (335)
T 2r3s_A 231 NDYDLVLLPNFLHHF-D-----------VATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNG 298 (335)
T ss_dssp SCEEEEEEESCGGGS-C-----------HHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSC
T ss_pred CCCcEEEEcchhccC-C-----------HHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCC
Confidence 239999996543221 1 1123467888899999999888764321
Q ss_pred CCCCcccHHHHHhhCCcEEEEEeeC
Q 016441 157 VPFSNWNIKELAIGSSLSLIWCSEF 181 (389)
Q Consensus 157 ~PY~sWnIe~LAa~aGL~L~~~~~F 181 (389)
..++.=++.++.+++||..++..+.
T Consensus 299 ~~~t~~~~~~ll~~aGf~~~~~~~~ 323 (335)
T 2r3s_A 299 DAYTFAEYESMFSNAGFSHSQLHSL 323 (335)
T ss_dssp CCCCHHHHHHHHHHTTCSEEEEECC
T ss_pred CcCCHHHHHHHHHHCCCCeeeEEEC
Confidence 1122234566788999998887654
No 85
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=96.27 E-value=0.014 Score=53.04 Aligned_cols=131 Identities=16% Similarity=0.174 Sum_probs=87.3
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC---EEEeccccCCCCCCCCcCC
Q 016441 24 NHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGT---CILHGVDATTMELHPDLRT 100 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv---~VlfgVDATkL~~~~~Lk~ 100 (389)
..+||=||=|.=.++..|++. +..++++-.+ +++.+ .+..++ +..|. .-+...|+.++.. +..
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s--~~~~~---~a~~~~---~~~~~~~~v~~~~~d~~~~~~---~~~ 134 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAER---GHQVILCDLS--AQMID---RAKQAA---EAKGVSDNMQFIHCAAQDVAS---HLE 134 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHH---HC-CCGGGEEEEESCGGGTGG---GCS
T ss_pred CCEEEEeCCcchHHHHHHHHC---CCEEEEEECC--HHHHH---HHHHHH---HhcCCCcceEEEEcCHHHhhh---hcC
Confidence 568999999999999999886 3466665443 33322 133333 33342 2344557777642 235
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC------------------------
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT------------------------ 156 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g------------------------ 156 (389)
..||.|+.+...--. ++ ...+++.+..+|+|+|.+.|+..+.
T Consensus 135 ~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (285)
T 4htf_A 135 TPVDLILFHAVLEWV---AD-----------PRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKK 200 (285)
T ss_dssp SCEEEEEEESCGGGC---SC-----------HHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC-
T ss_pred CCceEEEECchhhcc---cC-----------HHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccc
Confidence 789999998654322 11 1468999999999999999876311
Q ss_pred -------CCCCcccHHHHHhhCCcEEEEEeeCC
Q 016441 157 -------VPFSNWNIKELAIGSSLSLIWCSEFK 182 (389)
Q Consensus 157 -------~PY~sWnIe~LAa~aGL~L~~~~~F~ 182 (389)
.+++.-.+..+.+++||.+++...+.
T Consensus 201 ~~~~~~~~~~~~~~l~~~l~~aGf~v~~~~~~~ 233 (285)
T 4htf_A 201 KRTLSPDYPRDPTQVYLWLEEAGWQIMGKTGVR 233 (285)
T ss_dssp ---CCCSCCBCHHHHHHHHHHTTCEEEEEEEES
T ss_pred cccCCCCCCCCHHHHHHHHHHCCCceeeeeeEE
Confidence 12334478889999999999887764
No 86
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=96.24 E-value=0.039 Score=53.45 Aligned_cols=139 Identities=14% Similarity=0.119 Sum_probs=90.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh--------CCCEEEeccccCCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK--------LGTCILHGVDATTME 93 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~--------~Gv~VlfgVDATkL~ 93 (389)
.+..+||=||=|.=.++..|++.++....++++-.. .++.+ .+.+|++.+.. .++.++. -|+.++.
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s--~~~l~---~a~~~~~~~~~~~~g~~~~~~v~~~~-~d~~~l~ 155 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDML--DNQLE---VARKYVEYHAEKFFGSPSRSNVRFLK-GFIENLA 155 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECC--HHHHH---HHHHTHHHHHHHHHSSTTCCCEEEEE-SCTTCGG
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECC--HHHHH---HHHHHHHHhhhhcccccCCCceEEEE-ccHHHhh
Confidence 467799999999999999999988655567766543 22332 25555554421 2344443 4787763
Q ss_pred CC--CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC--------------
Q 016441 94 LH--PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV-------------- 157 (389)
Q Consensus 94 ~~--~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~-------------- 157 (389)
.. ..+....||.|+.|+...-. .| ...+++.+..+|+|||.+.++-....
T Consensus 156 ~~~~~~~~~~~fD~V~~~~~l~~~---~d-----------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 221 (383)
T 4fsd_A 156 TAEPEGVPDSSVDIVISNCVCNLS---TN-----------KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILY 221 (383)
T ss_dssp GCBSCCCCTTCEEEEEEESCGGGC---SC-----------HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHH
T ss_pred hcccCCCCCCCEEEEEEccchhcC---CC-----------HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHh
Confidence 22 13456789999999764432 12 24788999999999999998742211
Q ss_pred ------CCCcccHHHHHhhCCcEEEEEee
Q 016441 158 ------PFSNWNIKELAIGSSLSLIWCSE 180 (389)
Q Consensus 158 ------PY~sWnIe~LAa~aGL~L~~~~~ 180 (389)
.+..-.+.++.+++||..++...
T Consensus 222 ~~~~~~~~~~~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 222 GECLGGALYLEDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HTTCTTCCBHHHHHHHHHHTTCCCEEEEE
T ss_pred hcccccCCCHHHHHHHHHHCCCceEEEEe
Confidence 12224566788899998665543
No 87
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=96.21 E-value=0.03 Score=57.07 Aligned_cols=140 Identities=15% Similarity=0.131 Sum_probs=94.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
++++||=+|=|-=++|..||+..+....|+|.-.+. + ..+ .+.+|++.+.-.++.| ..-|++++... ....
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~-~-~l~---~~~~n~~r~g~~nv~~-~~~D~~~~~~~---~~~~ 187 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSA-S-RVK---VLHANISRCGISNVAL-THFDGRVFGAA---VPEM 187 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSH-H-HHH---HHHHHHHHHTCCSEEE-ECCCSTTHHHH---STTC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCH-H-HHH---HHHHHHHHcCCCcEEE-EeCCHHHhhhh---cccc
Confidence 678999999999999999998875445677765542 2 222 3677777654334444 44588776421 1357
Q ss_pred cceEEEcCCCCCCCCC----cc-----chHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCC-CcccHHHHHhhCC
Q 016441 103 FDRIIFNFPHAGFYGK----ED-----NHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPF-SNWNIKELAIGSS 172 (389)
Q Consensus 103 FDrIIFNFPH~G~~gk----ED-----~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY-~sWnIe~LAa~aG 172 (389)
||+|+.|=|..|. |. .+ ....+.....+-..++.+|..+|++||.+.++.|+-.|. +.-.|..+.++.+
T Consensus 188 fD~Il~D~PcSg~-G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 188 FDAILLDAPCSGE-GVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYP 266 (479)
T ss_dssp EEEEEEECCCCCG-GGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHST
T ss_pred CCEEEECCCcCCc-ccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHCC
Confidence 9999999998873 21 11 122344455667789999999999999999999987664 3445555544443
No 88
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=96.18 E-value=0.026 Score=49.36 Aligned_cols=105 Identities=18% Similarity=0.202 Sum_probs=67.4
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcC
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk 99 (389)
......+||=||=|.=.++..|++. .++++. |-.+++.+ .+++++.... ..+.++ ..|+.++. +.
T Consensus 30 ~~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~v--D~s~~~~~---~a~~~~~~~~-~~~~~~-~~d~~~~~----~~ 94 (243)
T 3d2l_A 30 QVEPGKRIADIGCGTGTATLLLADH----YEVTGV--DLSEEMLE---IAQEKAMETN-RHVDFW-VQDMRELE----LP 94 (243)
T ss_dssp HSCTTCEEEEESCTTCHHHHHHTTT----SEEEEE--ESCHHHHH---HHHHHHHHTT-CCCEEE-ECCGGGCC----CS
T ss_pred HcCCCCeEEEecCCCCHHHHHHhhC----CeEEEE--ECCHHHHH---HHHHhhhhcC-CceEEE-EcChhhcC----CC
Confidence 3445689999999999999888865 355554 43333332 2444443322 235544 44777653 22
Q ss_pred CCCcceEEEcC---CCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 100 TRKFDRIIFNF---PHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 100 ~~~FDrIIFNF---PH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
..||.|+.++ .|.. +..-+..+++.+..+|+++|.+.++.
T Consensus 95 -~~fD~v~~~~~~~~~~~-------------~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 95 -EPVDAITILCDSLNYLQ-------------TEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp -SCEEEEEECTTGGGGCC-------------SHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CCcCEEEEeCCchhhcC-------------CHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 6799999865 3432 12235678899999999999998854
No 89
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=96.18 E-value=0.045 Score=47.34 Aligned_cols=128 Identities=16% Similarity=0.145 Sum_probs=81.2
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
+..+||=||=|.=.++..|++. +.++++.-.+ +++.+. ++.++. .++.++ ..|+.++.. . ..
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s--~~~~~~---a~~~~~----~~~~~~-~~d~~~~~~----~-~~ 106 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPS--REMRMI---AKEKLP----KEFSIT-EGDFLSFEV----P-TS 106 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT---TCEEEEECSC--HHHHHH---HHHHSC----TTCCEE-SCCSSSCCC----C-SC
T ss_pred CCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCC--HHHHHH---HHHhCC----CceEEE-eCChhhcCC----C-CC
Confidence 5779999999999999999986 3456655443 333221 333322 344443 457777532 2 78
Q ss_pred cceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCC------------------------
Q 016441 103 FDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVP------------------------ 158 (389)
Q Consensus 103 FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P------------------------ 158 (389)
||.|+.+..---. .+ .-...+++.+..+|+++|.+.|+...-.+
T Consensus 107 fD~v~~~~~l~~~---~~---------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (220)
T 3hnr_A 107 IDTIVSTYAFHHL---TD---------DEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQ 174 (220)
T ss_dssp CSEEEEESCGGGS---CH---------HHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred eEEEEECcchhcC---Ch---------HHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcc
Confidence 9999998643221 11 11246788899999999999998522110
Q ss_pred ----CCcccHHHHHhhCCcEEEEEee
Q 016441 159 ----FSNWNIKELAIGSSLSLIWCSE 180 (389)
Q Consensus 159 ----Y~sWnIe~LAa~aGL~L~~~~~ 180 (389)
++.=.+.++.+++||.++....
T Consensus 175 ~~~~~~~~~~~~~l~~aGf~v~~~~~ 200 (220)
T 3hnr_A 175 TEYYTRIPVMQTIFENNGFHVTFTRL 200 (220)
T ss_dssp HSCCCBHHHHHHHHHHTTEEEEEEEC
T ss_pred hhhcCCHHHHHHHHHHCCCEEEEeec
Confidence 1223567788999998776543
No 90
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=96.18 E-value=0.053 Score=47.37 Aligned_cols=133 Identities=21% Similarity=0.219 Sum_probs=85.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||=||=|.=.++..|++. + ...+++.-.+ +++.+. ++.++ ...++.+ ...|+..+. +...
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~vD~s--~~~~~~---a~~~~---~~~~~~~-~~~d~~~~~----~~~~ 106 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEH-G-ASYVLGLDLS--EKMLAR---ARAAG---PDTGITY-ERADLDKLH----LPQD 106 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESC--HHHHHH---HHHTS---CSSSEEE-EECCGGGCC----CCTT
T ss_pred cCCCEEEEEcCcCCHHHHHHHHC-C-CCeEEEEcCC--HHHHHH---HHHhc---ccCCceE-EEcChhhcc----CCCC
Confidence 46779999999999999999876 3 2367666544 222221 22222 1123443 345777654 3457
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC------C-------------C----
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT------V-------------P---- 158 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g------~-------------P---- 158 (389)
.||.|+.++.---. ++ ...+++.+..+|+++|.+.++..+. . |
T Consensus 107 ~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (243)
T 3bkw_A 107 SFDLAYSSLALHYV---ED-----------VARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRY 172 (243)
T ss_dssp CEEEEEEESCGGGC---SC-----------HHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCT
T ss_pred CceEEEEecccccc---ch-----------HHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeeccc
Confidence 89999998753221 11 3478899999999999999876320 0 0
Q ss_pred -------------------CCcccHHHHHhhCCcEEEEEeeCCC
Q 016441 159 -------------------FSNWNIKELAIGSSLSLIWCSEFKI 183 (389)
Q Consensus 159 -------------------Y~sWnIe~LAa~aGL~L~~~~~F~~ 183 (389)
++.-.+.++.+++||..++...+.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~~~~~ 216 (243)
T 3bkw_A 173 LVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVEEFCP 216 (243)
T ss_dssp TCCEEECTTHHHHSCCEEECCHHHHHHHHHHTTCEEEEEEECCC
T ss_pred ccccceeeeeccCceEEEeccHHHHHHHHHHcCCEeeeeccCCC
Confidence 1223456788999999998877654
No 91
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=96.16 E-value=0.07 Score=50.90 Aligned_cols=140 Identities=21% Similarity=0.181 Sum_probs=90.5
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcC
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk 99 (389)
....+.+||=+|=|.=.++..+|...+....|++.-.| ..+.+ .|+.|++...-..+. +..-|++++...
T Consensus 200 ~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~--~~~i~---~a~~n~~~~g~~~i~-~~~~D~~~~~~~---- 269 (354)
T 3tma_A 200 DARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLD--EKRLG---LAREAALASGLSWIR-FLRADARHLPRF---- 269 (354)
T ss_dssp TCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESC--HHHHH---HHHHHHHHTTCTTCE-EEECCGGGGGGT----
T ss_pred CCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECC--HHHHH---HHHHHHHHcCCCceE-EEeCChhhCccc----
Confidence 34567789888888888888888766445677766555 33332 366676543211233 445688876432
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEEe
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWCS 179 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~ 179 (389)
...||.||.|-|.--..+. ......|...+++.+.++|+++|.+.+...+. ..++++.+ .|+...++.
T Consensus 270 ~~~~D~Ii~npPyg~r~~~------~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~-----~~~~~~~~-~g~~~~~~~ 337 (354)
T 3tma_A 270 FPEVDRILANPPHGLRLGR------KEGLFHLYWDFLRGALALLPPGGRVALLTLRP-----ALLKRALP-PGFALRHAR 337 (354)
T ss_dssp CCCCSEEEECCCSCC----------CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH-----HHHHHHCC-TTEEEEEEE
T ss_pred cCCCCEEEECCCCcCccCC------cccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH-----HHHHHHhh-cCcEEEEEE
Confidence 2458999999996432111 12345677899999999999999999876532 23455555 898888776
Q ss_pred eC
Q 016441 180 EF 181 (389)
Q Consensus 180 ~F 181 (389)
+.
T Consensus 338 ~l 339 (354)
T 3tma_A 338 VV 339 (354)
T ss_dssp EC
T ss_pred EE
Confidence 54
No 92
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=96.15 E-value=0.047 Score=45.43 Aligned_cols=129 Identities=12% Similarity=0.104 Sum_probs=83.9
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
..+..+||=||=|.=.++..|++.. . ++++.-.+ .+..+. ++.+ ..++.+..+ | ..+..
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~--~-~v~~vD~s--~~~~~~---a~~~-----~~~v~~~~~-d-------~~~~~ 73 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFA--T-KLYCIDIN--VIALKE---VKEK-----FDSVITLSD-P-------KEIPD 73 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTE--E-EEEEECSC--HHHHHH---HHHH-----CTTSEEESS-G-------GGSCT
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhc--C-eEEEEeCC--HHHHHH---HHHh-----CCCcEEEeC-C-------CCCCC
Confidence 3567799999999999999999875 2 56665444 222221 2223 224554433 3 22445
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC------C----CCcccHHHHHhh
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV------P----FSNWNIKELAIG 170 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~------P----Y~sWnIe~LAa~ 170 (389)
..||.|+.+..---. ++ ...+++.+..+|+++|.+.++-.... | ++...+.++.+
T Consensus 74 ~~~D~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~- 138 (170)
T 3i9f_A 74 NSVDFILFANSFHDM---DD-----------KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS- 138 (170)
T ss_dssp TCEEEEEEESCSTTC---SC-----------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT-
T ss_pred CceEEEEEccchhcc---cC-----------HHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh-
Confidence 789999998754432 12 24788889999999999999865332 1 23335556655
Q ss_pred CCcEEEEEeeCCCCCC
Q 016441 171 SSLSLIWCSEFKIEDY 186 (389)
Q Consensus 171 aGL~L~~~~~F~~~~Y 186 (389)
||.+++...+.+..|
T Consensus 139 -Gf~~~~~~~~~~~~~ 153 (170)
T 3i9f_A 139 -NFVVEKRFNPTPYHF 153 (170)
T ss_dssp -TEEEEEEECSSTTEE
T ss_pred -CcEEEEccCCCCceE
Confidence 999999888775544
No 93
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=96.12 E-value=0.011 Score=54.35 Aligned_cols=148 Identities=15% Similarity=0.172 Sum_probs=84.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC----CEEEeccccCCCCCC--
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG----TCILHGVDATTMELH-- 95 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G----v~VlfgVDATkL~~~-- 95 (389)
.+..+||=+|=|.=.+++.|++... ...|+|.-.+ +++.+ -|+.|++.+...| +.| +..|+.++...
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~--~~~~~---~a~~n~~~~~~~~l~~~v~~-~~~D~~~~~~~~~ 107 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERS--QEMAE---FARRSLELPDNAAFSARIEV-LEADVTLRAKARV 107 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESS--HHHHH---HHHHHTTSGGGTTTGGGEEE-EECCTTCCHHHHH
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECC--HHHHH---HHHHHHHhhhhCCCcceEEE-EeCCHHHHhhhhh
Confidence 4567899999999999999998763 3456665554 33332 3666765532233 344 45587765210
Q ss_pred -CCcCCCCcceEEEcCCCCCCCCCc--cchHHHHHh--HHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhh
Q 016441 96 -PDLRTRKFDRIIFNFPHAGFYGKE--DNHLLIEMH--RSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIG 170 (389)
Q Consensus 96 -~~Lk~~~FDrIIFNFPH~G~~gkE--D~~r~Ir~n--r~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~ 170 (389)
..+....||.|+.|-|-....+.. +..+.+..| ...+..|++.|..+|+++|.+.+.+... ..-.+.+++++
T Consensus 108 ~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~l~~ 184 (260)
T 2ozv_A 108 EAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ---SVAEIIAACGS 184 (260)
T ss_dssp HTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG---GHHHHHHHHTT
T ss_pred hhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH---HHHHHHHHHHh
Confidence 013457899999998876531111 111111111 1126789999999999999999876432 22234555554
Q ss_pred CCcEEEEEee
Q 016441 171 SSLSLIWCSE 180 (389)
Q Consensus 171 aGL~L~~~~~ 180 (389)
. +...+..+
T Consensus 185 ~-~~~~~i~~ 193 (260)
T 2ozv_A 185 R-FGGLEITL 193 (260)
T ss_dssp T-EEEEEEEE
T ss_pred c-CCceEEEE
Confidence 3 65555443
No 94
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=96.12 E-value=0.013 Score=51.71 Aligned_cols=134 Identities=14% Similarity=0.103 Sum_probs=84.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||=||=|.=.++..|++.. ...+++.-.+ ..+.+ .++.++... ..+.+ ...|+.++. +...
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s--~~~~~---~a~~~~~~~--~~~~~-~~~d~~~~~----~~~~ 157 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPV--KHMLE---EAKRELAGM--PVGKF-ILASMETAT----LPPN 157 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESC--HHHHH---HHHHHTTTS--SEEEE-EESCGGGCC----CCSS
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCC--HHHHH---HHHHHhccC--CceEE-EEccHHHCC----CCCC
Confidence 356799999999999999998875 3356655333 22222 133333221 22333 344777653 3456
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC--CC-----------CCcccHHHHH
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT--VP-----------FSNWNIKELA 168 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g--~P-----------Y~sWnIe~LA 168 (389)
.||.|+.++.---. ...-+..+++.+..+|+++|.+.|+-... .+ ++.-.+.++.
T Consensus 158 ~fD~v~~~~~l~~~------------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 225 (254)
T 1xtp_A 158 TYDLIVIQWTAIYL------------TDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLF 225 (254)
T ss_dssp CEEEEEEESCGGGS------------CHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHH
T ss_pred CeEEEEEcchhhhC------------CHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHH
Confidence 89999998742111 01125678899999999999999876311 11 1224577788
Q ss_pred hhCCcEEEEEeeC
Q 016441 169 IGSSLSLIWCSEF 181 (389)
Q Consensus 169 a~aGL~L~~~~~F 181 (389)
+++||.+++....
T Consensus 226 ~~aGf~~~~~~~~ 238 (254)
T 1xtp_A 226 NESGVRVVKEAFQ 238 (254)
T ss_dssp HHHTCCEEEEEEC
T ss_pred HHCCCEEEEeeec
Confidence 9999999887554
No 95
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=96.11 E-value=0.0059 Score=57.71 Aligned_cols=112 Identities=16% Similarity=0.236 Sum_probs=71.0
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH----hCCCEEEeccccCCC-CCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLK----KLGTCILHGVDATTM-ELHPD 97 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr----~~Gv~VlfgVDATkL-~~~~~ 97 (389)
...+||.||=|+=.++..|++..+ ...|++.-.|. ++.+ -+++|+..+. ...++++.+ |+.+. ..
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~--~~~~---~a~~~~~~~~~~~~~~~v~~~~~-D~~~~l~~--- 159 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDS-VEKAILCEVDG--LVIE---AARKYLKQTSCGFDDPRAEIVIA-NGAEYVRK--- 159 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTT-CSEEEEEESCH--HHHH---HHHHHCHHHHGGGGCTTEEEEES-CHHHHGGG---
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCH--HHHH---HHHHHhHhhccccCCCceEEEEC-cHHHHHhh---
Confidence 457999999999999999998653 45777776663 2222 2455655442 334666655 66542 21
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEec
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHK 154 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk 154 (389)
...+||.||.|.|+.+. +.. .......||+.+..+|+++|.+.+...
T Consensus 160 -~~~~fD~Ii~d~~~~~~-~~~--------~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 160 -FKNEFDVIIIDSTDPTA-GQG--------GHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp -CSSCEEEEEEEC-------------------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred -CCCCceEEEEcCCCccc-Cch--------hhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 13679999999875421 110 011136899999999999999988753
No 96
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=96.11 E-value=0.028 Score=53.07 Aligned_cols=108 Identities=19% Similarity=0.231 Sum_probs=71.7
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH-----------hCCCEEEecccc
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLK-----------KLGTCILHGVDA 89 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr-----------~~Gv~VlfgVDA 89 (389)
..+..+||=||=|.=.++.+|++..+....++|.-.+ ++..+ .|++|++.+. ...+.++ ..|+
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~ln~~~~~~~~v~~~-~~d~ 176 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVR--KDHHD---LAKKNYKHWRDSWKLSHVEEWPDNVDFI-HKDI 176 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESS--HHHHH---HHHHHHHHHHHHHTTTCSSCCCCCEEEE-ESCT
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCC--HHHHH---HHHHHHHHhhcccccccccccCCceEEE-ECCh
Confidence 3567899999999999999999987654567765443 33333 3677777653 1234444 4477
Q ss_pred CCCCCCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC
Q 016441 90 TTMELHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT 155 (389)
Q Consensus 90 TkL~~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 155 (389)
.++.. .+....||.|+.|.|+.- .++..+..+|+++|.+.+...+
T Consensus 177 ~~~~~--~~~~~~fD~V~~~~~~~~-------------------~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 177 SGATE--DIKSLTFDAVALDMLNPH-------------------VTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp TCCC---------EEEEEECSSSTT-------------------TTHHHHGGGEEEEEEEEEEESS
T ss_pred HHccc--ccCCCCeeEEEECCCCHH-------------------HHHHHHHHhcCCCcEEEEEeCC
Confidence 76532 234457999999877432 1678899999999999877643
No 97
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=96.07 E-value=0.021 Score=49.12 Aligned_cols=125 Identities=10% Similarity=0.036 Sum_probs=80.6
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
++.+||=||=|.=.++..|++.++ ...+++.-.+ +++.+ .++.|++.+.-.++. +...|+.++. ....
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~v~-~~~~d~~~~~-----~~~~ 132 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSL--GKRVR---FLRQVQHELKLENIE-PVQSRVEEFP-----SEPP 132 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESC--HHHHH---HHHHHHHHTTCSSEE-EEECCTTTSC-----CCSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCC--HHHHH---HHHHHHHHcCCCCeE-EEecchhhCC-----ccCC
Confidence 467999999999999999998763 4466655443 33332 255566544322333 4556777654 2357
Q ss_pred cceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEEeeCC
Q 016441 103 FDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWCSEFK 182 (389)
Q Consensus 103 FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~~F~ 182 (389)
||.|+.|.- ++ +..++..+..+|+++|.+.+..-. +..-.+.++.+ |+.+++..+|.
T Consensus 133 ~D~i~~~~~-------~~-----------~~~~l~~~~~~L~~gG~l~~~~~~---~~~~~~~~~~~--g~~~~~~~~~~ 189 (207)
T 1jsx_A 133 FDGVISRAF-------AS-----------LNDMVSWCHHLPGEQGRFYALKGQ---MPEDEIALLPE--EYQVESVVKLQ 189 (207)
T ss_dssp EEEEECSCS-------SS-----------HHHHHHHHTTSEEEEEEEEEEESS---CCHHHHHTSCT--TEEEEEEEEEE
T ss_pred cCEEEEecc-------CC-----------HHHHHHHHHHhcCCCcEEEEEeCC---CchHHHHHHhc--CCceeeeeeec
Confidence 999998631 11 348899999999999999987432 22233444433 88888876664
No 98
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=96.05 E-value=0.014 Score=51.77 Aligned_cols=133 Identities=17% Similarity=0.180 Sum_probs=85.0
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
+..+||=||=|.=.++..|++.. ...+++.-.+ +++.+ .++.++.......+. +...|+..+. +....
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~~-~~~~d~~~~~----~~~~~ 146 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDIT--EDFLV---QAKTYLGEEGKRVRN-YFCCGLQDFT----PEPDS 146 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESC--HHHHH---HHHHHTGGGGGGEEE-EEECCGGGCC----CCSSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCC--HHHHH---HHHHHhhhcCCceEE-EEEcChhhcC----CCCCC
Confidence 47799999999999999998764 3466665443 22222 133333322111122 4456777654 23468
Q ss_pred cceEEEcCC--CCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC-------C-----CCcccHHHHH
Q 016441 103 FDRIIFNFP--HAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV-------P-----FSNWNIKELA 168 (389)
Q Consensus 103 FDrIIFNFP--H~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~-------P-----Y~sWnIe~LA 168 (389)
||.|+.++. |+. ..-+..+++.+..+|+++|.+.|+-.... . ++.-.+.++.
T Consensus 147 fD~v~~~~~l~~~~--------------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 212 (241)
T 2ex4_A 147 YDVIWIQWVIGHLT--------------DQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRII 212 (241)
T ss_dssp EEEEEEESCGGGSC--------------HHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHH
T ss_pred EEEEEEcchhhhCC--------------HHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHH
Confidence 999999843 332 12246889999999999999998643211 0 1233567788
Q ss_pred hhCCcEEEEEeeC
Q 016441 169 IGSSLSLIWCSEF 181 (389)
Q Consensus 169 a~aGL~L~~~~~F 181 (389)
+++||.+++....
T Consensus 213 ~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 213 CSAGLSLLAEERQ 225 (241)
T ss_dssp HHTTCCEEEEEEC
T ss_pred HHcCCeEEEeeec
Confidence 9999999987665
No 99
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=96.05 E-value=0.013 Score=48.86 Aligned_cols=123 Identities=16% Similarity=0.141 Sum_probs=81.3
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCC-CCCCCCc
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATT-MELHPDL 98 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATk-L~~~~~L 98 (389)
..+..+||-+|=|.=.++..|++.. ..+++.-.+ ++..+ .++.|++...- ..+.+ ...|+.+ +..
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~--~~~~~---~a~~~~~~~~~~~~~~~-~~~d~~~~~~~---- 97 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRN--PEAIS---TTEMNLQRHGLGDNVTL-MEGDAPEALCK---- 97 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESC--HHHHH---HHHHHHHHTTCCTTEEE-EESCHHHHHTT----
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECC--HHHHH---HHHHHHHHcCCCcceEE-EecCHHHhccc----
Confidence 4567899999999999999998764 467666554 22222 24555544322 12333 3346554 221
Q ss_pred CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEE
Q 016441 99 RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLI 176 (389)
Q Consensus 99 k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~ 176 (389)
...||.|+.+.|-- + +..+++.+..+|+++|.+.++.... .+.+.+.++.++.|+.+.
T Consensus 98 -~~~~D~v~~~~~~~------~-----------~~~~l~~~~~~l~~gG~l~~~~~~~--~~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 98 -IPDIDIAVVGGSGG------E-----------LQEILRIIKDKLKPGGRIIVTAILL--ETKFEAMECLRDLGFDVN 155 (192)
T ss_dssp -SCCEEEEEESCCTT------C-----------HHHHHHHHHHTEEEEEEEEEEECBH--HHHHHHHHHHHHTTCCCE
T ss_pred -CCCCCEEEECCchH------H-----------HHHHHHHHHHhcCCCcEEEEEecCc--chHHHHHHHHHHCCCceE
Confidence 14799999986521 1 3578999999999999999876543 355777888888888443
No 100
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=96.04 E-value=0.053 Score=47.77 Aligned_cols=136 Identities=15% Similarity=0.114 Sum_probs=84.8
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCCc
Q 016441 24 NHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRKF 103 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~F 103 (389)
..+||=||=|.=.++..|++. +..++++ |-.+++.+. ++.++.......-.-+...|++++.. ...|
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gv--D~s~~~~~~---a~~~~~~~~~~~~v~~~~~d~~~~~~-----~~~f 133 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASP---ERFVVGL--DISESALAK---ANETYGSSPKAEYFSFVKEDVFTWRP-----TELF 133 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBT---TEEEEEE--CSCHHHHHH---HHHHHTTSGGGGGEEEECCCTTTCCC-----SSCE
T ss_pred CCCEEEeCCCCCHHHHHHHhC---CCeEEEE--ECCHHHHHH---HHHHhhccCCCcceEEEECchhcCCC-----CCCe
Confidence 348999999999999998763 3455554 533333321 44443321111113344567777542 3489
Q ss_pred ceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC------CCCC--CcccHHHHHhhCCcEE
Q 016441 104 DRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT------TVPF--SNWNIKELAIGSSLSL 175 (389)
Q Consensus 104 DrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~------g~PY--~sWnIe~LAa~aGL~L 175 (389)
|.|+.+....-. ..+ -...+++.+..+|+++|.+.+.... +.|+ +.=.+.++.+++||..
T Consensus 134 D~v~~~~~l~~~-~~~-----------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 201 (235)
T 3lcc_A 134 DLIFDYVFFCAI-EPE-----------MRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKA 201 (235)
T ss_dssp EEEEEESSTTTS-CGG-----------GHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEE
T ss_pred eEEEEChhhhcC-CHH-----------HHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeE
Confidence 999987654432 111 1457889999999999999886543 2232 2235667888999999
Q ss_pred EEEeeCCCC
Q 016441 176 IWCSEFKIE 184 (389)
Q Consensus 176 ~~~~~F~~~ 184 (389)
++.......
T Consensus 202 ~~~~~~~~~ 210 (235)
T 3lcc_A 202 VSVEENPHA 210 (235)
T ss_dssp EEEEECTTC
T ss_pred EEEEecCCc
Confidence 988776544
No 101
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=96.00 E-value=0.22 Score=42.86 Aligned_cols=123 Identities=12% Similarity=0.088 Sum_probs=81.1
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
..+..+||=||=|.=.++..|++.. ....++|.-.+ ++..+ .+++|++...-..+.++ .-|+.+.-. ..
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~v~~~-~~d~~~~~~----~~ 106 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERN--PQYLG---FIRDNLKKFVARNVTLV-EAFAPEGLD----DL 106 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECC--HHHHH---HHHHHHHHHTCTTEEEE-ECCTTTTCT----TS
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCC--HHHHH---HHHHHHHHhCCCcEEEE-eCChhhhhh----cC
Confidence 4567899999999999999999874 34567666554 33332 35667665543234433 345543221 12
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCc
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSL 173 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL 173 (389)
..||.|+.+.+.- -+..+++.+..+|+++|.+.+...... +.-.+.++.+++|+
T Consensus 107 ~~~D~i~~~~~~~-----------------~~~~~l~~~~~~LkpgG~l~~~~~~~~--~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 107 PDPDRVFIGGSGG-----------------MLEEIIDAVDRRLKSEGVIVLNAVTLD--TLTKAVEFLEDHGY 160 (204)
T ss_dssp CCCSEEEESCCTT-----------------CHHHHHHHHHHHCCTTCEEEEEECBHH--HHHHHHHHHHHTTC
T ss_pred CCCCEEEECCCCc-----------------CHHHHHHHHHHhcCCCeEEEEEecccc--cHHHHHHHHHHCCC
Confidence 5699999987542 134789999999999999998754321 23356667778887
No 102
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=95.99 E-value=0.11 Score=48.61 Aligned_cols=135 Identities=15% Similarity=0.073 Sum_probs=84.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCCCCCcCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
++..+||=||=|.=.++..|++.+. . +..|.+|- ..+.+. +.+++....- ..+++ ..-|+.. ..+
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p-~--~~~~~~D~-~~~~~~---a~~~~~~~~~~~~v~~-~~~d~~~--~~p---- 233 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHE-D--LSGTVLDL-QGPASA---AHRRFLDTGLSGRAQV-VVGSFFD--PLP---- 233 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCT-T--CEEEEEEC-HHHHHH---HHHHHHHTTCTTTEEE-EECCTTS--CCC----
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCC-C--CeEEEecC-HHHHHH---HHHhhhhcCcCcCeEE-ecCCCCC--CCC----
Confidence 4567999999999999999999873 2 34455677 555442 5555443211 11222 2345531 111
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC-------------------CCCCCc
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT-------------------TVPFSN 161 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~-------------------g~PY~s 161 (389)
..||.|+...----+ .| +-...+++.+..+|+|||.+.|.-.. +..++.
T Consensus 234 ~~~D~v~~~~vlh~~---~~---------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~ 301 (332)
T 3i53_A 234 AGAGGYVLSAVLHDW---DD---------LSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSL 301 (332)
T ss_dssp CSCSEEEEESCGGGS---CH---------HHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCH
T ss_pred CCCcEEEEehhhccC---CH---------HHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCH
Confidence 179999987543222 11 12446788889999999999886432 112333
Q ss_pred ccHHHHHhhCCcEEEEEeeCC
Q 016441 162 WNIKELAIGSSLSLIWCSEFK 182 (389)
Q Consensus 162 WnIe~LAa~aGL~L~~~~~F~ 182 (389)
=++.++.+++||..++..+..
T Consensus 302 ~e~~~ll~~aGf~~~~~~~~~ 322 (332)
T 3i53_A 302 AELGELAAQAGLAVRAAHPIS 322 (332)
T ss_dssp HHHHHHHHHTTEEEEEEEECS
T ss_pred HHHHHHHHHCCCEEEEEEECC
Confidence 346678899999999887654
No 103
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=95.98 E-value=0.038 Score=49.55 Aligned_cols=102 Identities=18% Similarity=0.191 Sum_probs=66.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||=||=|.=.++..|++.. .++++.-++ .++.+. +++++. ++.++ ..|+.++.. ..
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s--~~~~~~---a~~~~~-----~~~~~-~~d~~~~~~-----~~ 109 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF---GTVEGLELS--ADMLAI---ARRRNP-----DAVLH-HGDMRDFSL-----GR 109 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS---SEEEEEESC--HHHHHH---HHHHCT-----TSEEE-ECCTTTCCC-----SC
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC---CeEEEEECC--HHHHHH---HHhhCC-----CCEEE-ECChHHCCc-----cC
Confidence 456899999999999999998762 356655433 333321 333321 45554 447777543 47
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
.||.|+.++.-+... .+.+-+..+++.+..+|+|+|.+.|+
T Consensus 110 ~fD~v~~~~~~l~~~----------~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 110 RFSAVTCMFSSIGHL----------AGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp CEEEEEECTTGGGGS----------CHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CcCEEEEcCchhhhc----------CCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 899999876311110 12234668899999999999999986
No 104
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=95.97 E-value=0.031 Score=47.86 Aligned_cols=114 Identities=13% Similarity=0.091 Sum_probs=70.9
Q ss_pred ccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCC
Q 016441 18 IKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPD 97 (389)
Q Consensus 18 ~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~ 97 (389)
+.+..+..+||=||=|.-.++..++... +.++++. |-.+++.+. ++.+++... ..+.+. ..|++++.
T Consensus 18 ~~~~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~v--D~s~~~~~~---a~~~~~~~~-~~~~~~-~~d~~~~~---- 84 (209)
T 2p8j_A 18 CNESNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGI--EISDLQLKK---AENFSRENN-FKLNIS-KGDIRKLP---- 84 (209)
T ss_dssp HHHSSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEE--ECCHHHHHH---HHHHHHHHT-CCCCEE-ECCTTSCC----
T ss_pred HhccCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEE--ECCHHHHHH---HHHHHHhcC-CceEEE-ECchhhCC----
Confidence 4455677899999999887765555443 3455554 533333332 444544332 345443 44777653
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT 156 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 156 (389)
+....||.|+.+..-... . ..-...+++.+..+|+|+|.+.++..+.
T Consensus 85 ~~~~~fD~v~~~~~l~~~-~-----------~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 85 FKDESMSFVYSYGTIFHM-R-----------KNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp SCTTCEEEEEECSCGGGS-C-----------HHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred CCCCceeEEEEcChHHhC-C-----------HHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 345789999987432111 0 1125578889999999999999987653
No 105
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=95.94 E-value=0.13 Score=48.69 Aligned_cols=136 Identities=17% Similarity=0.152 Sum_probs=84.8
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeccccCCCCCCCCcC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL-GTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~-Gv~VlfgVDATkL~~~~~Lk 99 (389)
..+..+||=||=|.=.++..|++.+. ...+ |..|- ..+.+ .+++++....-. ++++ ...|+.+ . +.
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~--~~~D~-~~~~~---~a~~~~~~~~~~~~v~~-~~~d~~~--~---~~ 246 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAP-HLRG--TLVEL-AGPAE---RARRRFADAGLADRVTV-AEGDFFK--P---LP 246 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCT-TCEE--EEEEC-HHHHH---HHHHHHHHTTCTTTEEE-EECCTTS--C---CS
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCC-CCEE--EEEeC-HHHHH---HHHHHHHhcCCCCceEE-EeCCCCC--c---CC
Confidence 45678999999999999999999863 3344 55565 44444 255555432211 2333 3346543 1 11
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEec-----CC------------------
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHK-----TT------------------ 156 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk-----~g------------------ 156 (389)
..||.|+.+..---. .+ .-...+++.+..+|+|+|.+.|.-. +.
T Consensus 247 -~~~D~v~~~~vl~~~---~~---------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (374)
T 1qzz_A 247 -VTADVVLLSFVLLNW---SD---------EDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMG 313 (374)
T ss_dssp -CCEEEEEEESCGGGS---CH---------HHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHS
T ss_pred -CCCCEEEEeccccCC---CH---------HHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCC
Confidence 239999998653222 11 1134788889999999998887543 11
Q ss_pred -CCCCcccHHHHHhhCCcEEEEEeeCC
Q 016441 157 -VPFSNWNIKELAIGSSLSLIWCSEFK 182 (389)
Q Consensus 157 -~PY~sWnIe~LAa~aGL~L~~~~~F~ 182 (389)
..++.=++.++.+++||..++..+..
T Consensus 314 ~~~~~~~~~~~ll~~aGf~~~~~~~~~ 340 (374)
T 1qzz_A 314 GRVRTRDEVVDLAGSAGLALASERTSG 340 (374)
T ss_dssp CCCCCHHHHHHHHHTTTEEEEEEEEEC
T ss_pred CcCCCHHHHHHHHHHCCCceEEEEECC
Confidence 11233345668889999999887664
No 106
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=95.94 E-value=0.021 Score=54.23 Aligned_cols=111 Identities=16% Similarity=0.202 Sum_probs=70.2
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH-----hCCCEEEeccccCCCCCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLK-----KLGTCILHGVDATTMELHPD 97 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr-----~~Gv~VlfgVDATkL~~~~~ 97 (389)
+..+||.||=|+-..++.|++.. ....|++.-.|.. +.+ -|++++..+. ...++|+. -|+.+.-..
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~--vi~---~ar~~~~~~~~~~~~~~rv~~~~-~D~~~~l~~-- 153 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAG--VVS---FCRQYLPNHNAGSYDDPRFKLVI-DDGVNFVNQ-- 153 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTT--HHH---HHHHHCHHHHSSCTTCTTCCEEC-SCSCC---C--
T ss_pred CCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHH--HHH---HHHHhhhhcccccccCCceEEEE-ChHHHHHhh--
Confidence 45799999999999999999864 3457887777643 222 1455655542 33466654 366543211
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
...+||.||.|.|..-. .. .......||+.+..+|+++|.+.+..
T Consensus 154 -~~~~fDvIi~D~~~p~~--~~--------~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 154 -TSQTFDVIISDCTDPIG--PG--------ESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp -CCCCEEEEEECC--------------------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred -cCCCccEEEECCCCccC--cc--------hhccHHHHHHHHHHhcCCCCEEEEec
Confidence 24689999999875321 10 11112689999999999999888765
No 107
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=95.91 E-value=0.032 Score=46.36 Aligned_cols=127 Identities=17% Similarity=0.061 Sum_probs=78.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC--EEEeccccCCCCCCCCcC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGT--CILHGVDATTMELHPDLR 99 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv--~VlfgVDATkL~~~~~Lk 99 (389)
.+..+||=||=|.=.++..|++.++ +..+++.-.+ ++..+ .++.|++. .|. .|...-|+.. .....
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~--~~~~~---~a~~~~~~---~~~~~~~~~~~d~~~---~~~~~ 91 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEIS--EERRE---RILSNAIN---LGVSDRIAVQQGAPR---AFDDV 91 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSC--HHHHH---HHHHHHHT---TTCTTSEEEECCTTG---GGGGC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCC--HHHHH---HHHHHHHH---hCCCCCEEEecchHh---hhhcc
Confidence 4567999999999999999998763 3456655443 33332 25555543 343 2344455533 11111
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEEe
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWCS 179 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~ 179 (389)
...||.|+.+++.-- ..+++.+..+|+++|.+.++..... +...+.++-++.|+.+.+..
T Consensus 92 ~~~~D~i~~~~~~~~------------------~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 151 (178)
T 3hm2_A 92 PDNPDVIFIGGGLTA------------------PGVFAAAWKRLPVGGRLVANAVTVE--SEQMLWALRKQFGGTISSFA 151 (178)
T ss_dssp CSCCSEEEECC-TTC------------------TTHHHHHHHTCCTTCEEEEEECSHH--HHHHHHHHHHHHCCEEEEEE
T ss_pred CCCCCEEEECCcccH------------------HHHHHHHHHhcCCCCEEEEEeeccc--cHHHHHHHHHHcCCeeEEEE
Confidence 267999998875421 3688889999999999998775432 22344455556666666543
Q ss_pred e
Q 016441 180 E 180 (389)
Q Consensus 180 ~ 180 (389)
.
T Consensus 152 ~ 152 (178)
T 3hm2_A 152 I 152 (178)
T ss_dssp E
T ss_pred e
Confidence 3
No 108
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=95.88 E-value=0.0056 Score=58.81 Aligned_cols=110 Identities=23% Similarity=0.308 Sum_probs=72.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH----HhCCCEEEeccccCCC-CCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNL----KKLGTCILHGVDATTM-ELHPD 97 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~L----r~~Gv~VlfgVDATkL-~~~~~ 97 (389)
...+||-||=|+=.++..|++..+ ...+++.-.|. ++.+ -|++|+..+ ....++++.+ |+.+. ..
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDis~--~~l~---~ar~~~~~~~~~~~~~~v~~~~~-D~~~~l~~--- 185 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDE--TVIE---VSKIYFKNISCGYEDKRVNVFIE-DASKFLEN--- 185 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTT-CCEEEEEESCH--HHHH---HHHHHCTTTSGGGGSTTEEEEES-CHHHHHHH---
T ss_pred CCCEEEEEcCCccHHHHHHHHcCC-CCEEEEEECCH--HHHH---HHHHHHHhhccccCCCcEEEEEc-cHHHHHhh---
Confidence 457999999999999999997643 45777776663 2222 245555442 2234555544 65542 11
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHH-HHHHHhhHhcccCCCeEEEEec
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLV-RDFFRNSSGMLRDGGEVHVSHK 154 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL-~~FF~SA~~lL~~~GeIHVTLk 154 (389)
...+||.||.|.|+.- +. ...|. ..||+.+..+|+++|.+.+...
T Consensus 186 -~~~~fDvIi~d~~~p~--~~---------~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 186 -VTNTYDVIIVDSSDPI--GP---------AETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp -CCSCEEEEEEECCCSS--SG---------GGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -cCCCceEEEECCcCCC--Cc---------chhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 1367999999986432 11 11233 6899999999999999988753
No 109
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=95.86 E-value=0.082 Score=47.13 Aligned_cols=135 Identities=17% Similarity=0.132 Sum_probs=82.1
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
..++.+||=||=|.=.++..|++..+ ...|+|.-.+ .+ +.+. ..+..+. ..++..+. -|++.+.....+.
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s-~~-~l~~---~~~~a~~--~~~v~~~~-~d~~~~~~~~~~~- 124 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYS-AK-PFEK---LLELVRE--RNNIIPLL-FDASKPWKYSGIV- 124 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCC-HH-HHHH---HHHHHHH--CSSEEEEC-SCTTCGGGTTTTC-
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECC-HH-HHHH---HHHHHhc--CCCeEEEE-cCCCCchhhcccc-
Confidence 35678999999999999999998875 4466665444 22 2111 1111111 13454444 3777653222233
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcc---c-----HHHHHhhCC
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNW---N-----IKELAIGSS 172 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sW---n-----Ie~LAa~aG 172 (389)
..||.|+.|.++. + -...+++.+..+|+|||.+.++++.+..-..+ . +++ .+++
T Consensus 125 ~~fD~V~~~~~~~------~----------~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~-l~~~- 186 (210)
T 1nt2_A 125 EKVDLIYQDIAQK------N----------QIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKE-MEGD- 186 (210)
T ss_dssp CCEEEEEECCCST------T----------HHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHH-HHTT-
T ss_pred cceeEEEEeccCh------h----------HHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHH-HHhh-
Confidence 6899999996432 1 12356888999999999999997543211122 2 222 3445
Q ss_pred cEEEEEeeCCC
Q 016441 173 LSLIWCSEFKI 183 (389)
Q Consensus 173 L~L~~~~~F~~ 183 (389)
|.+.+.....+
T Consensus 187 f~~~~~~~~~p 197 (210)
T 1nt2_A 187 FKIVKHGSLMP 197 (210)
T ss_dssp SEEEEEEECTT
T ss_pred cEEeeeecCCC
Confidence 99998877643
No 110
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=95.85 E-value=0.024 Score=47.68 Aligned_cols=118 Identities=17% Similarity=0.107 Sum_probs=71.4
Q ss_pred cccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeccccCCCCCC
Q 016441 17 WIKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL-GTCILHGVDATTMELH 95 (389)
Q Consensus 17 ~~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~-Gv~VlfgVDATkL~~~ 95 (389)
++....+..+||=+|=|.=.++..|++. + ...+++.-.+ +++.+ .++.|++...-. .+. +..-|+.+.-.
T Consensus 25 ~l~~~~~~~~vLDlGcG~G~~~~~l~~~-~-~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~~~-~~~~d~~~~~~- 95 (177)
T 2esr_A 25 MIGPYFNGGRVLDLFAGSGGLAIEAVSR-G-MSAAVLVEKN--RKAQA---IIQDNIIMTKAENRFT-LLKMEAERAID- 95 (177)
T ss_dssp HHCSCCCSCEEEEETCTTCHHHHHHHHT-T-CCEEEEECCC--HHHHH---HHHHHHHTTTCGGGEE-EECSCHHHHHH-
T ss_pred HHHhhcCCCeEEEeCCCCCHHHHHHHHc-C-CCEEEEEECC--HHHHH---HHHHHHHHcCCCCceE-EEECcHHHhHH-
Confidence 4444567889999999999999999876 3 3467766554 33332 255555432111 133 33446655211
Q ss_pred CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCC
Q 016441 96 PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVP 158 (389)
Q Consensus 96 ~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P 158 (389)
.....||.|+.|.|... ....+++..+.. ..+|+++|.+.++......
T Consensus 96 --~~~~~fD~i~~~~~~~~-----------~~~~~~~~~l~~--~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 96 --CLTGRFDLVFLDPPYAK-----------ETIVATIEALAA--KNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp --HBCSCEEEEEECCSSHH-----------HHHHHHHHHHHH--TTCEEEEEEEEEEEETTCC
T ss_pred --hhcCCCCEEEECCCCCc-----------chHHHHHHHHHh--CCCcCCCcEEEEEECCccc
Confidence 11245999999988521 012333444333 5899999999998876653
No 111
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=95.82 E-value=0.0054 Score=58.99 Aligned_cols=109 Identities=18% Similarity=0.213 Sum_probs=67.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH----HhCCCEEEeccccCC-CCCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNL----KKLGTCILHGVDATT-MELHPD 97 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~L----r~~Gv~VlfgVDATk-L~~~~~ 97 (389)
...+||.||=|+=.++..|+++. ....|++.-.|. ++.+ -|++|+..+ ....++++ .-||.+ |..
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~--~~i~---~Ar~~~~~~~~~~~~~rv~~~-~~D~~~~l~~--- 177 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDE--MVID---VAKKFLPGMSCGFSHPKLDLF-CGDGFEFLKN--- 177 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCH--HHHH---HHHHHCTTTSGGGGCTTEEEE-CSCHHHHHHH---
T ss_pred CCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCH--HHHH---HHHHHHHHhccccCCCCEEEE-EChHHHHHHh---
Confidence 45799999999999999999864 345777776663 2222 244454332 22334544 346654 221
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHH-HHHHHhhHhcccCCCeEEEEe
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLV-RDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL-~~FF~SA~~lL~~~GeIHVTL 153 (389)
...+||.||.|.|+.-. ....|. ..||+.+..+|+++|.+.+..
T Consensus 178 -~~~~fD~Ii~d~~~~~~-----------~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 178 -HKNEFDVIITDSSDPVG-----------PAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp -CTTCEEEEEECCC------------------------HHHHHHHHEEEEEEEEEEC
T ss_pred -cCCCceEEEEcCCCCCC-----------cchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 24679999999876421 112344 799999999999999998875
No 112
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=95.82 E-value=0.042 Score=46.99 Aligned_cols=113 Identities=17% Similarity=0.103 Sum_probs=74.0
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.++.+||=+|=|.=.++..++.. + ...++|.-.+ +++.+ .++.|++...-..+. +..-|+.++... +...
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~-~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~v~-~~~~d~~~~~~~--~~~~ 112 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-G-AASVLFVESD--QRSAA---VIARNIEALGLSGAT-LRRGAVAAVVAA--GTTS 112 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEECC--HHHHH---HHHHHHHHHTCSCEE-EEESCHHHHHHH--CCSS
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-C-CCeEEEEECC--HHHHH---HHHHHHHHcCCCceE-EEEccHHHHHhh--ccCC
Confidence 46789999999988888877764 2 3456665544 33333 366677665432333 345577665321 2247
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHh--cccCCCeEEEEecCCC
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSG--MLRDGGEVHVSHKTTV 157 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~--lL~~~GeIHVTLk~g~ 157 (389)
.||.|+.|.|.... ...+..++..+.. +|+|+|.+.|......
T Consensus 113 ~fD~i~~~~p~~~~-------------~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 113 PVDLVLADPPYNVD-------------SADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp CCSEEEECCCTTSC-------------HHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred CccEEEECCCCCcc-------------hhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 89999999995542 1235566677777 9999999999887654
No 113
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=95.81 E-value=0.0048 Score=57.86 Aligned_cols=110 Identities=22% Similarity=0.250 Sum_probs=71.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH----HhCCCEEEeccccCCCCCCCCc
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNL----KKLGTCILHGVDATTMELHPDL 98 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~L----r~~Gv~VlfgVDATkL~~~~~L 98 (389)
+..+||.||=|+=+.+..|++.. ...++++.-.|.. +.+ -+++++..+ ....++|+. -|+.+.-..
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~--~i~---~a~~~~~~~~~~~~~~~v~~~~-~D~~~~l~~--- 147 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDET--VIE---VSKIYFKNISCGYEDKRVNVFI-EDASKFLEN--- 147 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHH--HHH---HHHHHCTTTSGGGGSTTEEEEE-SCHHHHHHH---
T ss_pred CCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHH--HHH---HHHHHhHHhccccCCCcEEEEE-CChHHHHHh---
Confidence 45799999999999999998764 3457777776632 222 134444332 233455544 366552110
Q ss_pred CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHH-HHHHHhhHhcccCCCeEEEEe
Q 016441 99 RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLV-RDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 99 k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL-~~FF~SA~~lL~~~GeIHVTL 153 (389)
...+||.||.|.+..-. . ...|. ..||+.+..+|+++|.+.+..
T Consensus 148 ~~~~fD~Ii~d~~~~~~--~---------~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 148 VTNTYDVIIVDSSDPIG--P---------AETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp CCSCEEEEEEECCCTTT--G---------GGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCceEEEEcCCCCCC--c---------chhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 14679999998775421 1 11233 689999999999999998764
No 114
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=95.77 E-value=0.0091 Score=56.86 Aligned_cols=111 Identities=17% Similarity=0.261 Sum_probs=73.6
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH-----hCCCEEEeccccCCC-CCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLK-----KLGTCILHGVDATTM-ELHP 96 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr-----~~Gv~VlfgVDATkL-~~~~ 96 (389)
...+||.||=|+=.+++.|++..+ ...+++.-.|. ++.+ -|++++..+. ...++++. -|+.+. ..
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~--~~i~---~ar~~~~~~~~~~~~~~~v~~~~-~D~~~~l~~-- 147 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDG--ELVE---VAKRHMPEWHQGAFDDPRAVLVI-DDARAYLER-- 147 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCH--HHHH---HHHHHCHHHHTTGGGCTTEEEEE-SCHHHHHHH--
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCH--HHHH---HHHHHhHhhccccccCCceEEEE-chHHHHHHh--
Confidence 457999999999999999998643 45677776663 2332 2455665532 33456554 376652 21
Q ss_pred CcCCCCcceEEEcCCCCCCC-CCccchHHHHHhHHH-HHHHHHhhHhcccCCCeEEEEe
Q 016441 97 DLRTRKFDRIIFNFPHAGFY-GKEDNHLLIEMHRSL-VRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 97 ~Lk~~~FDrIIFNFPH~G~~-gkED~~r~Ir~nr~L-L~~FF~SA~~lL~~~GeIHVTL 153 (389)
...+||.||.|.|..-.. +. ...| ...||+.+..+|+++|.+.+..
T Consensus 148 --~~~~fD~Ii~d~~~~~~~~~~---------~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 148 --TEERYDVVIIDLTDPVGEDNP---------ARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp --CCCCEEEEEEECCCCBSTTCG---------GGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred --cCCCccEEEECCCCcccccCc---------chhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 236799999998863200 10 1112 4689999999999999998864
No 115
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=95.74 E-value=0.01 Score=55.12 Aligned_cols=129 Identities=17% Similarity=0.128 Sum_probs=83.9
Q ss_pred ccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCC
Q 016441 18 IKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPD 97 (389)
Q Consensus 18 ~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~ 97 (389)
+....++.+||=+|=|.=+|++.||+..+ +..++|.-.+ .+..+ .++.|++...-.++. ...-|+.++ ..
T Consensus 114 ~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s--~~av~---~a~~n~~~n~l~~~~-~~~~d~~~~-~~-- 183 (272)
T 3a27_A 114 AFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKN--PTAYH---YLCENIKLNKLNNVI-PILADNRDV-EL-- 183 (272)
T ss_dssp HTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECC--HHHHH---HHHHHHHHTTCSSEE-EEESCGGGC-CC--
T ss_pred HHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCC--HHHHH---HHHHHHHHcCCCCEE-EEECChHHc-Cc--
Confidence 44467788999999999999999998764 4466665443 33332 366676543322344 566788887 22
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCC--CC-ccc-HHHHHhhCCc
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVP--FS-NWN-IKELAIGSSL 173 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P--Y~-sWn-Ie~LAa~aGL 173 (389)
...||.|+.|.|. + +..++..+..+|+++|.|+++-..... .. ... ++.+++..+.
T Consensus 184 --~~~~D~Vi~d~p~-~-----------------~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (272)
T 3a27_A 184 --KDVADRVIMGYVH-K-----------------THKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGY 243 (272)
T ss_dssp --TTCEEEEEECCCS-S-----------------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTE
T ss_pred --cCCceEEEECCcc-c-----------------HHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCC
Confidence 4679999999996 2 124677788899999999988664421 11 122 3445555565
Q ss_pred EEE
Q 016441 174 SLI 176 (389)
Q Consensus 174 ~L~ 176 (389)
.+.
T Consensus 244 ~~~ 246 (272)
T 3a27_A 244 KLI 246 (272)
T ss_dssp EEE
T ss_pred eeE
Confidence 443
No 116
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=95.73 E-value=0.015 Score=49.57 Aligned_cols=121 Identities=17% Similarity=0.220 Sum_probs=74.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||-||=|.=.++..|++. +. .++++.-.+ +.+.+ .+++++.. ..++.++ ..|+.++. +...
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~-~~-~~v~~~D~s--~~~~~---~a~~~~~~--~~~i~~~-~~d~~~~~----~~~~ 106 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLG-GF-PNVTSVDYS--SVVVA---AMQACYAH--VPQLRWE-TMDVRKLD----FPSA 106 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHT-TC-CCEEEEESC--HHHHH---HHHHHTTT--CTTCEEE-ECCTTSCC----SCSS
T ss_pred CCCCeEEEECCCCcHHHHHHHHc-CC-CcEEEEeCC--HHHHH---HHHHhccc--CCCcEEE-EcchhcCC----CCCC
Confidence 56789999999998899999876 32 367776554 22222 13334332 1245554 45887763 3457
Q ss_pred CcceEEEcCCCCCCC-CCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC
Q 016441 102 KFDRIIFNFPHAGFY-GKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT 156 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~-gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 156 (389)
.||.|+.+.|--... +..+.-..-..+..-+..+++.+..+|+++|.+.+.....
T Consensus 107 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 107 SFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp CEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 899999876531100 0000000001345567889999999999999999876543
No 117
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=95.72 E-value=0.0099 Score=50.59 Aligned_cols=117 Identities=18% Similarity=0.152 Sum_probs=75.7
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCC--------CcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSA--------SNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTM 92 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~--------~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL 92 (389)
..+..+||=+|=|.=.++..|++.++.. ..|+|.-.+... ...++.++-..|++.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----------------~~~~~~~~~~~d~~~~ 83 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----------------PLEGATFLCPADVTDP 83 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----------------CCTTCEEECSCCTTSH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----------------cCCCCeEEEeccCCCH
Confidence 4568899999999999999999987632 567777665421 0124554424455543
Q ss_pred CCC----CCcCCCCcceEEEcC-CCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC
Q 016441 93 ELH----PDLRTRKFDRIIFNF-PHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV 157 (389)
Q Consensus 93 ~~~----~~Lk~~~FDrIIFNF-PH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 157 (389)
... ..+....||.|+.|+ ||+-+....| ......+...+++.+..+|+++|.+.++...+.
T Consensus 84 ~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 149 (196)
T 2nyu_A 84 RTSQRILEVLPGRRADVILSDMAPNATGFRDLD----HDRLISLCLTLLSVTPDILQPGGTFLCKTWAGS 149 (196)
T ss_dssp HHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHH----HHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSG
T ss_pred HHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccC----HHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Confidence 210 002345799999998 4543211111 122345667899999999999999999876653
No 118
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=95.66 E-value=0.032 Score=48.92 Aligned_cols=118 Identities=17% Similarity=0.195 Sum_probs=68.9
Q ss_pred cccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh--CCCEEEeccccCCCCC
Q 016441 17 WIKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK--LGTCILHGVDATTMEL 94 (389)
Q Consensus 17 ~~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~--~Gv~VlfgVDATkL~~ 94 (389)
|+....++.+||=+|=|.=.++..++.. + ...|+|.-.+ +++.+ .++.|++...- ..+.+ ..-|+.++..
T Consensus 47 ~l~~~~~~~~vLDlGcGtG~~~~~~~~~-~-~~~v~gvD~s--~~~l~---~a~~~~~~~~~~~~~v~~-~~~d~~~~~~ 118 (201)
T 2ift_A 47 WLMPYIHQSECLDGFAGSGSLGFEALSR-Q-AKKVTFLELD--KTVAN---QLKKNLQTLKCSSEQAEV-INQSSLDFLK 118 (201)
T ss_dssp HHHHHHTTCEEEETTCTTCHHHHHHHHT-T-CSEEEEECSC--HHHHH---HHHHHHHHTTCCTTTEEE-ECSCHHHHTT
T ss_pred HHHHhcCCCeEEEcCCccCHHHHHHHHc-c-CCEEEEEECC--HHHHH---HHHHHHHHhCCCccceEE-EECCHHHHHH
Confidence 3333336779999988888888876654 2 2456554443 33433 25666654432 13333 4447665432
Q ss_pred CCCcCCCC-cceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC
Q 016441 95 HPDLRTRK-FDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV 157 (389)
Q Consensus 95 ~~~Lk~~~-FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 157 (389)
. +.... ||.|+.|.|.. . ++ ...++..+.+ ..+|+++|.+.++.....
T Consensus 119 ~--~~~~~~fD~I~~~~~~~-~---~~-------~~~~l~~~~~--~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 119 Q--PQNQPHFDVVFLDPPFH-F---NL-------AEQAISLLCE--NNWLKPNALIYVETEKDK 167 (201)
T ss_dssp S--CCSSCCEEEEEECCCSS-S---CH-------HHHHHHHHHH--TTCEEEEEEEEEEEESSS
T ss_pred h--hccCCCCCEEEECCCCC-C---cc-------HHHHHHHHHh--cCccCCCcEEEEEECCCC
Confidence 1 22467 99999999921 1 11 1222333222 678999999999887654
No 119
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=95.64 E-value=0.11 Score=45.31 Aligned_cols=100 Identities=19% Similarity=0.225 Sum_probs=65.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||=||=|.=.++..|++... ++++ .|-..++.+. +++++ .++.+. ..|+.++.. ..
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~--~D~s~~~~~~---a~~~~-----~~~~~~-~~d~~~~~~-----~~ 99 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG---DTAG--LELSEDMLTH---ARKRL-----PDATLH-QGDMRDFRL-----GR 99 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS---EEEE--EESCHHHHHH---HHHHC-----TTCEEE-ECCTTTCCC-----SS
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC---cEEE--EeCCHHHHHH---HHHhC-----CCCEEE-ECCHHHccc-----CC
Confidence 5678999999999999999998752 5665 4533333321 33222 235544 457776542 46
Q ss_pred CcceEEE---cCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 102 KFDRIIF---NFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 102 ~FDrIIF---NFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
.||.|+. .+.|... .+-+..+++.+..+|+++|.+.++.
T Consensus 100 ~~D~v~~~~~~~~~~~~-------------~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 100 KFSAVVSMFSSVGYLKT-------------TEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CEEEEEECTTGGGGCCS-------------HHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCcEEEEcCchHhhcCC-------------HHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 7999994 2344421 1235678999999999999998874
No 120
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=95.60 E-value=0.15 Score=48.85 Aligned_cols=147 Identities=10% Similarity=0.023 Sum_probs=93.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
..+++||=+|=|-=..|..||...+....|+|.-.+. +.+ ..+++|++.+.-.++.+ ..-|+.++..... ...
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~-~~l----~~~~~n~~r~g~~~v~~-~~~D~~~~~~~~~-~~~ 173 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDA-KRL----ASMATLLARAGVSCCEL-AEEDFLAVSPSDP-RYH 173 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCH-HHH----HHHHHHHHHTTCCSEEE-EECCGGGSCTTCG-GGT
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCH-HHH----HHHHHHHHHcCCCeEEE-EeCChHhcCcccc-ccC
Confidence 4578999998888888888988765445677765542 222 23566765543223444 4558888754211 125
Q ss_pred CcceEEEcCCCCCCCCCc----cc-------hHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCC-CcccHHHHHh
Q 016441 102 KFDRIIFNFPHAGFYGKE----DN-------HLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPF-SNWNIKELAI 169 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkE----D~-------~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY-~sWnIe~LAa 169 (389)
.||+|+.|=|..|. |.- |. ...+..-..+-...+..|..+|+ +|.+..+-|+-.|- +...|..+.+
T Consensus 174 ~fD~Vl~D~PcSg~-G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~ 251 (309)
T 2b9e_A 174 EVHYILLDPSCSGS-GMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDALQ 251 (309)
T ss_dssp TEEEEEECCCCCC-------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHHT
T ss_pred CCCEEEEcCCcCCC-CCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHHH
Confidence 79999999999884 320 10 01233344556778889999887 89999888887653 5667777554
Q ss_pred h-CC-cEEEE
Q 016441 170 G-SS-LSLIW 177 (389)
Q Consensus 170 ~-aG-L~L~~ 177 (389)
+ .+ +.++.
T Consensus 252 ~~~~~~~~~~ 261 (309)
T 2b9e_A 252 QNPGAFRLAP 261 (309)
T ss_dssp TSTTTEEECC
T ss_pred hCCCcEEEec
Confidence 4 45 76653
No 121
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=95.60 E-value=0.18 Score=48.37 Aligned_cols=136 Identities=15% Similarity=0.131 Sum_probs=84.4
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
+++..+||=||=|.=.++..|++.+. . +-.|.+|- ..+.+ .+++++....-.+-.-...-|... . +..
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~--~~~~~~D~-~~~~~---~a~~~~~~~~l~~~v~~~~~d~~~--~---~p~ 267 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFP-G--LRGTLLER-PPVAE---EARELLTGRGLADRCEILPGDFFE--T---IPD 267 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCT-T--CEEEEEEC-HHHHH---HHHHHHHHTTCTTTEEEEECCTTT--C---CCS
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCC-C--CeEEEEcC-HHHHH---HHHHhhhhcCcCCceEEeccCCCC--C---CCC
Confidence 45678999999999999999999863 3 34456676 44443 255554432111112233345541 1 122
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC---------------------CCCC
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT---------------------TVPF 159 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~---------------------g~PY 159 (389)
.||.|+...----+ .| .-...+++.+..+|+|+|.+.|.-.. +..+
T Consensus 268 -~~D~v~~~~vlh~~---~d---------~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~ 334 (369)
T 3gwz_A 268 -GADVYLIKHVLHDW---DD---------DDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAER 334 (369)
T ss_dssp -SCSEEEEESCGGGS---CH---------HHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCB
T ss_pred -CceEEEhhhhhccC---CH---------HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccC
Confidence 69999987654322 11 11346788899999999999885321 1123
Q ss_pred CcccHHHHHhhCCcEEEEEeeC
Q 016441 160 SNWNIKELAIGSSLSLIWCSEF 181 (389)
Q Consensus 160 ~sWnIe~LAa~aGL~L~~~~~F 181 (389)
+.=+++++.+++||.+++..+.
T Consensus 335 t~~e~~~ll~~aGf~~~~~~~~ 356 (369)
T 3gwz_A 335 SESEFAALLEKSGLRVERSLPC 356 (369)
T ss_dssp CHHHHHHHHHTTTEEEEEEEEC
T ss_pred CHHHHHHHHHHCCCeEEEEEEC
Confidence 3334667888999999998763
No 122
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=95.56 E-value=0.045 Score=50.01 Aligned_cols=123 Identities=15% Similarity=0.162 Sum_probs=82.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEeccccCCCCCCCCcC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG--TCILHGVDATTMELHPDLR 99 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G--v~VlfgVDATkL~~~~~Lk 99 (389)
.+..+||=+|=|.=.++.++++. + + .++|+-.|... +. .+++|++. .| +.+.. -|+.+. +.
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~-g-~-~v~gvDi~~~~-v~----~a~~n~~~---~~~~v~~~~-~d~~~~-----~~ 181 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKL-G-G-KALGVDIDPMV-LP----QAEANAKR---NGVRPRFLE-GSLEAA-----LP 181 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-T-C-EEEEEESCGGG-HH----HHHHHHHH---TTCCCEEEE-SCHHHH-----GG
T ss_pred CCCCEEEEecCCCcHHHHHHHHh-C-C-eEEEEECCHHH-HH----HHHHHHHH---cCCcEEEEE-CChhhc-----Cc
Confidence 46789999999999999988874 3 2 78887766432 21 24455542 34 33332 244331 23
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEEe
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWCS 179 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~ 179 (389)
..+||.|+.|.+.- .+..++..+..+|+++|.+.++-... ...-.+.++.+++||.+.+..
T Consensus 182 ~~~fD~Vv~n~~~~-----------------~~~~~l~~~~~~LkpgG~lils~~~~--~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 182 FGPFDLLVANLYAE-----------------LHAALAPRYREALVPGGRALLTGILK--DRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp GCCEEEEEEECCHH-----------------HHHHHHHHHHHHEEEEEEEEEEEEEG--GGHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEECCcHH-----------------HHHHHHHHHHHHcCCCCEEEEEeecc--CCHHHHHHHHHHCCCEEEEEe
Confidence 46799999997531 24678899999999999999864322 134467778888999998764
Q ss_pred e
Q 016441 180 E 180 (389)
Q Consensus 180 ~ 180 (389)
.
T Consensus 243 ~ 243 (254)
T 2nxc_A 243 A 243 (254)
T ss_dssp E
T ss_pred c
Confidence 3
No 123
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=95.52 E-value=0.18 Score=46.20 Aligned_cols=111 Identities=16% Similarity=0.133 Sum_probs=73.0
Q ss_pred ccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEE-eccccCCCCCCC
Q 016441 18 IKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCIL-HGVDATTMELHP 96 (389)
Q Consensus 18 ~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~Vl-fgVDATkL~~~~ 96 (389)
+....+..+||=||=|.=.++..|++.++.+..++++-++. .+.+ .++.++ +..+..|- ..-|+.++..
T Consensus 17 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~--~~~~---~a~~~~---~~~~~~v~~~~~d~~~~~~-- 86 (284)
T 3gu3_A 17 VWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGE--TLLA---EARELF---RLLPYDSEFLEGDATEIEL-- 86 (284)
T ss_dssp TSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCH--HHHH---HHHHHH---HSSSSEEEEEESCTTTCCC--
T ss_pred HhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCH--HHHH---HHHHHH---HhcCCceEEEEcchhhcCc--
Confidence 34456788999999999999999999875456777765542 2222 133333 33443443 3346666432
Q ss_pred CcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC
Q 016441 97 DLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT 155 (389)
Q Consensus 97 ~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 155 (389)
...||.|+.+..---. .| ...+++.+..+|+|+|.+.+.-..
T Consensus 87 ---~~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 87 ---NDKYDIAICHAFLLHM---TT-----------PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ---SSCEEEEEEESCGGGC---SS-----------HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ---CCCeeEEEECChhhcC---CC-----------HHHHHHHHHHHcCCCCEEEEEecc
Confidence 3589999998753221 12 137888899999999999877544
No 124
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=95.51 E-value=0.046 Score=46.14 Aligned_cols=106 Identities=16% Similarity=0.095 Sum_probs=67.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||=||=|.=.++..|++. +.++++.-.+ +.+.+ .++.+++...-.++.+ ...|+.++.. ..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~~~-~~~d~~~~~~-----~~ 96 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKN--AMSIA---NVERIKSIENLDNLHT-RVVDLNNLTF-----DR 96 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHHHHHTCTTEEE-EECCGGGCCC-----CC
T ss_pred cCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECC--HHHHH---HHHHHHHhCCCCCcEE-EEcchhhCCC-----CC
Confidence 35679999999999999999886 3466665444 23332 2444544332223443 4457777542 46
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
.||.|+.+.+.--. ..+ -...+++.+..+|+++|.+.|..
T Consensus 97 ~~D~v~~~~~l~~~-~~~-----------~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 97 QYDFILSTVVLMFL-EAK-----------TIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp CEEEEEEESCGGGS-CGG-----------GHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CceEEEEcchhhhC-CHH-----------HHHHHHHHHHHhcCCCeEEEEEE
Confidence 89999998643221 111 13578899999999999976543
No 125
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=95.49 E-value=0.029 Score=49.66 Aligned_cols=106 Identities=20% Similarity=0.181 Sum_probs=69.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeccccCCCCCCCCcCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG-TCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G-v~VlfgVDATkL~~~~~Lk~ 100 (389)
.+..+||-||=|.=.++..|++.++ +..+++.-.+ .+..+ .|+.|++.+.-.. +.+ ...|+.+.-... ...
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~v~~-~~~d~~~~~~~~-~~~ 124 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALP-EATIVSIERD--ERRYE---EAHKHVKALGLESRIEL-LFGDALQLGEKL-ELY 124 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCC--HHHHH---HHHHHHHHTTCTTTEEE-ECSCGGGSHHHH-TTS
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECC--HHHHH---HHHHHHHHcCCCCcEEE-EECCHHHHHHhc-ccC
Confidence 4677999999999999999998874 4566665444 33332 2555655432212 333 344666531100 013
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
..||.|+.+.|.. -...+|+.+..+|+++|.+.++
T Consensus 125 ~~fD~I~~~~~~~-----------------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 125 PLFDVLFIDAAKG-----------------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp CCEEEEEEEGGGS-----------------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCccEEEECCCHH-----------------HHHHHHHHHHHHcCCCeEEEEE
Confidence 6799999988742 1457899999999999999886
No 126
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=95.41 E-value=0.33 Score=46.01 Aligned_cols=136 Identities=13% Similarity=0.066 Sum_probs=86.1
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeccccCCCCCCCCcC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG-TCILHGVDATTMELHPDLR 99 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G-v~VlfgVDATkL~~~~~Lk 99 (389)
+.+..+||=||=|.=.++..|++.+. ...+ |..|- ..+.+ .++++++...-.+ +++ ..-|+.++. +.
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~--~~~D~-~~~~~---~a~~~~~~~~~~~~v~~-~~~d~~~~~----~~ 255 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFP-ELDS--TILNL-PGAID---LVNENAAEKGVADRMRG-IAVDIYKES----YP 255 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCT-TCEE--EEEEC-GGGHH---HHHHHHHHTTCTTTEEE-EECCTTTSC----CC
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCC-CCeE--EEEec-HHHHH---HHHHHHHhcCCCCCEEE-EeCccccCC----CC
Confidence 46778999999999999999999863 3344 45566 44443 2555554322112 333 345776642 22
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC---------------------CCC
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT---------------------TVP 158 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~---------------------g~P 158 (389)
.+|.|+.++.--.. . .+-...+++.+..+|+|+|.+.|.-.. +..
T Consensus 256 --~~D~v~~~~vlh~~---~---------d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~ 321 (359)
T 1x19_A 256 --EADAVLFCRILYSA---N---------EQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFS 321 (359)
T ss_dssp --CCSEEEEESCGGGS---C---------HHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCC
T ss_pred --CCCEEEEechhccC---C---------HHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCc
Confidence 23999987653322 1 123567889999999999999665311 222
Q ss_pred ----CCcccHHHHHhhCCcEEEEEeeCC
Q 016441 159 ----FSNWNIKELAIGSSLSLIWCSEFK 182 (389)
Q Consensus 159 ----Y~sWnIe~LAa~aGL~L~~~~~F~ 182 (389)
++.=+++++.+++||..++..+..
T Consensus 322 ~~~~~t~~e~~~ll~~aGf~~v~~~~~~ 349 (359)
T 1x19_A 322 VLGFKEQARYKEILESLGYKDVTMVRKY 349 (359)
T ss_dssp CCCCCCGGGHHHHHHHHTCEEEEEEEET
T ss_pred ccCCCCHHHHHHHHHHCCCceEEEEecC
Confidence 344456678888899888876643
No 127
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=95.40 E-value=0.055 Score=47.90 Aligned_cols=106 Identities=17% Similarity=0.245 Sum_probs=67.9
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
+..+||=||=|.=.++..|++. +.++++. |-.+++.+ .++.++.... ..+.++ ..|+.++.. ...
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~---~~~v~gv--D~s~~~l~---~a~~~~~~~~-~~v~~~-~~d~~~~~~-----~~~ 105 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER---GYEVVGL--DLHEEMLR---VARRKAKERN-LKIEFL-QGDVLEIAF-----KNE 105 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT---TCEEEEE--ESCHHHHH---HHHHHHHHTT-CCCEEE-ESCGGGCCC-----CSC
T ss_pred CCCEEEEeCCCCCHHHHHHHHC---CCeEEEE--ECCHHHHH---HHHHHHHhcC-CceEEE-ECChhhccc-----CCC
Confidence 4579999999999999999885 3455554 53333332 2444443321 234444 448777642 257
Q ss_pred cceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEec
Q 016441 103 FDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHK 154 (389)
Q Consensus 103 FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk 154 (389)
||.|+.++..... .+..-+..+++.+..+|+|+|.+.++..
T Consensus 106 fD~v~~~~~~~~~-----------~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 106 FDAVTMFFSTIMY-----------FDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp EEEEEECSSGGGG-----------SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccEEEEcCCchhc-----------CCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 9999976532221 0122366889999999999999998764
No 128
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=95.39 E-value=0.18 Score=47.50 Aligned_cols=136 Identities=19% Similarity=0.237 Sum_probs=84.4
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeccccCCCCCCCCcC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL-GTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~-Gv~VlfgVDATkL~~~~~Lk 99 (389)
..+..+||=||=|.=.++..|++.+. ++.+|..|- .++.+ .+++|+....-. .++++ .-|+.+ . +.
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~---~~~~~~~D~-~~~~~---~a~~~~~~~~~~~~v~~~-~~d~~~--~---~~ 247 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAP---HVSATVLEM-AGTVD---TARSYLKDEGLSDRVDVV-EGDFFE--P---LP 247 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCT---TCEEEEEEC-TTHHH---HHHHHHHHTTCTTTEEEE-ECCTTS--C---CS
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCC---CCEEEEecC-HHHHH---HHHHHHHhcCCCCceEEE-eCCCCC--C---CC
Confidence 45678999999999999999998863 344555665 33333 255555432211 24443 346543 1 11
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC----C-------------------
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT----T------------------- 156 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~----g------------------- 156 (389)
..||.|+.++.---. .+ .-...+++.+..+|+|+|.+.|.-.. .
T Consensus 248 -~~~D~v~~~~vl~~~---~~---------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (360)
T 1tw3_A 248 -RKADAIILSFVLLNW---PD---------HDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGG 314 (360)
T ss_dssp -SCEEEEEEESCGGGS---CH---------HHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSC
T ss_pred -CCccEEEEcccccCC---CH---------HHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCC
Confidence 239999987653221 11 11357888889999999998876432 1
Q ss_pred CCCCcccHHHHHhhCCcEEEEEeeCC
Q 016441 157 VPFSNWNIKELAIGSSLSLIWCSEFK 182 (389)
Q Consensus 157 ~PY~sWnIe~LAa~aGL~L~~~~~F~ 182 (389)
..++.=+++++.+++||.+++..+..
T Consensus 315 ~~~t~~e~~~ll~~aGf~~~~~~~~~ 340 (360)
T 1tw3_A 315 ALRTREKWDGLAASAGLVVEEVRQLP 340 (360)
T ss_dssp CCCBHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cCCCHHHHHHHHHHCCCeEEEEEeCC
Confidence 11222345668889999999887664
No 129
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=95.38 E-value=0.0081 Score=56.14 Aligned_cols=108 Identities=19% Similarity=0.219 Sum_probs=69.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH-----------HhCCCEEEeccccC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNL-----------KKLGTCILHGVDAT 90 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~L-----------r~~Gv~VlfgVDAT 90 (389)
....+||.||=|+=.++..|+++ + ..++++.-.|.. +.+ -|++|+ .+ ....++|+.+ ||.
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~-~~~v~~vDid~~--~i~---~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~-D~~ 144 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-D-VDEVIMVEIDED--VIM---VSKDLI-KIDNGLLEAMLNGKHEKAKLTIG-DGF 144 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-C-CSEEEEEESCHH--HHH---HHHHHT-CTTTTHHHHHHTTCCSSEEEEES-CHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-C-CCEEEEEECCHH--HHH---HHHHHH-hhccccccccccCCCCcEEEEEC-chH
Confidence 35679999999999999999986 3 457877776632 222 134444 22 1233555543 665
Q ss_pred CCCCCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHH-HHHHHHhhHhcccCCCeEEEEe
Q 016441 91 TMELHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSL-VRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 91 kL~~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~L-L~~FF~SA~~lL~~~GeIHVTL 153 (389)
+.-. . ..+||.|+.|.|..-. . ...| ...||+.+..+|+++|.+.+..
T Consensus 145 ~~l~---~-~~~fD~Ii~d~~~~~~--~---------~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 145 EFIK---N-NRGFDVIIADSTDPVG--P---------AKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp HHHH---H-CCCEEEEEEECCCCC----------------TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHhc---c-cCCeeEEEECCCCCCC--c---------chhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 4211 0 3679999999985321 1 1112 3689999999999999998874
No 130
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=95.37 E-value=0.046 Score=51.01 Aligned_cols=126 Identities=14% Similarity=0.166 Sum_probs=79.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH----hCCCEEEeccccCC-CCCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLK----KLGTCILHGVDATT-MELHPD 97 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr----~~Gv~VlfgVDATk-L~~~~~ 97 (389)
...+||.||=|+=..+..+++..+ ...|++--.|. ++.+ -|++|+..+. ...++|+.+ ||.+ |..
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vEid~--~~v~---~ar~~~~~~~~~~~~~rv~v~~~-D~~~~l~~--- 144 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPS-VKKATLVDIDG--KVIE---YSKKFLPSIAGKLDDPRVDVQVD-DGFMHIAK--- 144 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTT-CSEEEEEESCH--HHHH---HHHHHCHHHHTTTTSTTEEEEES-CSHHHHHT---
T ss_pred CCCEEEEECCchHHHHHHHHhCCC-CceEEEEECCH--HHHH---HHHHHhHhhccccCCCceEEEEC-cHHHHHhh---
Confidence 467999999999999999987643 45677766663 2332 2455665542 234666655 6655 222
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCC----CcccHHHHHhhC
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPF----SNWNIKELAIGS 171 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY----~sWnIe~LAa~a 171 (389)
...+||.||.|.|.... ... ......||+.+..+|+++|.+.+... .|+ ..|.+.+..++.
T Consensus 145 -~~~~fD~Ii~d~~~~~~--~~~--------~l~~~~~~~~~~~~L~pgG~lv~~~~--~~~~~~~~~~~~~~~l~~~ 209 (275)
T 1iy9_A 145 -SENQYDVIMVDSTEPVG--PAV--------NLFTKGFYAGIAKALKEDGIFVAQTD--NPWFTPELITNVQRDVKEI 209 (275)
T ss_dssp -CCSCEEEEEESCSSCCS--CCC--------CCSTTHHHHHHHHHEEEEEEEEEECC--CTTTCHHHHHHHHHHHHTT
T ss_pred -CCCCeeEEEECCCCCCC--cch--------hhhHHHHHHHHHHhcCCCcEEEEEcC--CccccHHHHHHHHHHHHHh
Confidence 13679999999887321 110 00124799999999999999988743 332 135555544444
No 131
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=95.32 E-value=0.21 Score=43.83 Aligned_cols=123 Identities=14% Similarity=0.151 Sum_probs=74.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||-+|=|.=.++..|++. +..+++.-.+ ++..+ .+++|++...-..-.....-|+.+.. +...
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~~~~~~~d~~~~~----~~~~ 157 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAV--EEFYK---TAQKNLKKFNLGKNVKFFNVDFKDAE----VPEG 157 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSC--HHHHH---HHHHHHHHTTCCTTEEEECSCTTTSC----CCTT
T ss_pred CCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecC--HHHHH---HHHHHHHHcCCCCcEEEEEcChhhcc----cCCC
Confidence 46789999999999999999987 3567666554 22222 25556544321011223344555432 1346
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEE
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWC 178 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~ 178 (389)
.||.|+.|.|.. ..+++.+.++|+++|.+.+...... ....+.++.++. +.-.+.
T Consensus 158 ~~D~v~~~~~~~-------------------~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~l~~~-f~~~~~ 212 (248)
T 2yvl_A 158 IFHAAFVDVREP-------------------WHYLEKVHKSLMEGAPVGFLLPTAN--QVIKLLESIENY-FGNLEV 212 (248)
T ss_dssp CBSEEEECSSCG-------------------GGGHHHHHHHBCTTCEEEEEESSHH--HHHHHHHHSTTT-EEEEEE
T ss_pred cccEEEECCcCH-------------------HHHHHHHHHHcCCCCEEEEEeCCHH--HHHHHHHHHHhh-CCcceE
Confidence 799999987632 2457888999999999999875432 122344444444 554443
No 132
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=95.30 E-value=0.047 Score=49.32 Aligned_cols=145 Identities=17% Similarity=0.161 Sum_probs=88.7
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC--EEEeccccCCCCCCCCcCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGT--CILHGVDATTMELHPDLRT 100 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv--~VlfgVDATkL~~~~~Lk~ 100 (389)
++++||=||=|.=.++..||+.. .+..+++.-... +.+.+.=..|..++ ++.|. ..+..-|+..+... . .
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~-~~ml~~A~~A~~~~---~~~~~~~v~~~~~d~~~l~~~--~-~ 95 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVK-ENLFDISKKIIKKP---SKGGLSNVVFVIAAAESLPFE--L-K 95 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCC-GGGHHHHHHHTSCG---GGTCCSSEEEECCBTTBCCGG--G-T
T ss_pred CCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCH-HHHHHHHHHHHHHH---HHcCCCCeEEEEcCHHHhhhh--c-c
Confidence 46689999999999999998754 344566554443 33322100122222 23342 34456788887321 1 2
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE--EecCC----------CC--CCcc----
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV--SHKTT----------VP--FSNW---- 162 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV--TLk~g----------~P--Y~sW---- 162 (389)
..+|.|..|||..- .....+.-...+|+.+..+|+|||.+.+ +..+. .| ...|
T Consensus 96 d~v~~i~~~~~~~~---------~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (225)
T 3p2e_A 96 NIADSISILFPWGT---------LLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSE 166 (225)
T ss_dssp TCEEEEEEESCCHH---------HHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSH
T ss_pred CeEEEEEEeCCCcH---------HhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchH
Confidence 67899999998321 0111111124688999999999999998 22221 11 1234
Q ss_pred cHHHHHhhCCcEEEEEeeCCCC
Q 016441 163 NIKELAIGSSLSLIWCSEFKIE 184 (389)
Q Consensus 163 nIe~LAa~aGL~L~~~~~F~~~ 184 (389)
++..+.+++||.+.+...|+..
T Consensus 167 el~~~l~~aGf~v~~~~~~~~~ 188 (225)
T 3p2e_A 167 QYKAELSNSGFRIDDVKELDNE 188 (225)
T ss_dssp HHHHHHHHHTCEEEEEEEECHH
T ss_pred HHHHHHHHcCCCeeeeeecCHH
Confidence 3777888999999999988854
No 133
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=95.28 E-value=0.023 Score=54.10 Aligned_cols=111 Identities=19% Similarity=0.251 Sum_probs=70.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH----HhCCCEEEeccccCC-CCCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNL----KKLGTCILHGVDATT-MELHP 96 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~L----r~~Gv~VlfgVDATk-L~~~~ 96 (389)
....+||.||=|+=.+++.|+++. ....|++.-.|. ++.+ -|++|+..+ ....++++.+ ||.+ |..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~--~~i~---~ar~~~~~~~~~~~~~rv~v~~~-Da~~~l~~-- 164 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDE--DVIQ---VSKKFLPGMAIGYSSSKLTLHVG-DGFEFMKQ-- 164 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCH--HHHH---HHHHHCHHHHGGGGCTTEEEEES-CHHHHHHT--
T ss_pred CCCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCH--HHHH---HHHHHhHHhhcccCCCcEEEEEC-cHHHHHhh--
Confidence 356799999999999999999764 345677666653 2332 245555543 2344666544 6654 222
Q ss_pred CcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 97 DLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 97 ~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
...+||.||.|.|..-. .. .......||+.+..+|+++|.+.+..
T Consensus 165 --~~~~fD~Ii~d~~~~~~--~~--------~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 165 --NQDAFDVIITDSSDPMG--PA--------ESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp --CSSCEEEEEEECC---------------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred --CCCCceEEEECCCCCCC--cc--------hhhhHHHHHHHHHhccCCCeEEEEec
Confidence 23679999999885421 10 11124589999999999999998765
No 134
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=95.24 E-value=0.06 Score=47.22 Aligned_cols=111 Identities=16% Similarity=0.138 Sum_probs=65.9
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
+..+||=+|=|.=.+++.++... ...|+|. |-.+++.+ .++.|++...-..++++ .-|+.+.-. .....
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~v--D~s~~~l~---~a~~~~~~~~~~~v~~~-~~D~~~~~~---~~~~~ 122 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY--AAGATLI--EMDRAVSQ---QLIKNLATLKAGNARVV-NSNAMSFLA---QKGTP 122 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--CSEEEEE--CSCHHHHH---HHHHHHHHTTCCSEEEE-CSCHHHHHS---SCCCC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC--CCEEEEE--ECCHHHHH---HHHHHHHHcCCCcEEEE-ECCHHHHHh---hcCCC
Confidence 56799999888888888776652 2355554 53344433 25666654432234443 446665211 12467
Q ss_pred cceEEEcCC-CCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCC
Q 016441 103 FDRIIFNFP-HAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVP 158 (389)
Q Consensus 103 FDrIIFNFP-H~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P 158 (389)
||.|+.|.| |.+. ...++..+.+ ..+|+++|.+.|+......
T Consensus 123 fD~V~~~~p~~~~~------------~~~~l~~l~~--~~~L~pgG~l~i~~~~~~~ 165 (202)
T 2fpo_A 123 HNIVFVDPPFRRGL------------LEETINLLED--NGWLADEALIYVESEVENG 165 (202)
T ss_dssp EEEEEECCSSSTTT------------HHHHHHHHHH--TTCEEEEEEEEEEEEGGGC
T ss_pred CCEEEECCCCCCCc------------HHHHHHHHHh--cCccCCCcEEEEEECCCcc
Confidence 999999999 4321 1223333322 4579999999998876543
No 135
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=95.22 E-value=0.16 Score=44.75 Aligned_cols=124 Identities=15% Similarity=0.069 Sum_probs=81.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeccccCC-CCCCCCcC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL-GTCILHGVDATT-MELHPDLR 99 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~-Gv~VlfgVDATk-L~~~~~Lk 99 (389)
.++.+||=||=|.=.++..||+. +..++|.-.+ ++..+ .|++|++.+.-. ++.++ .-|+.+ +..
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s--~~~~~---~a~~~~~~~g~~~~v~~~-~~d~~~~~~~----- 119 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPR--ADRIE---NIQKNIDTYGLSPRMRAV-QGTAPAALAD----- 119 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHHHHTTCTTTEEEE-ESCTTGGGTT-----
T ss_pred CCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCC--HHHHH---HHHHHHHHcCCCCCEEEE-eCchhhhccc-----
Confidence 46789999999999999999986 3466665444 33332 366666554333 34443 346665 221
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEEe
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWCS 179 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~ 179 (389)
...||.|+.+. +. + .. +++.+..+|+++|.+.++..+.. +...+.+..++.|+.+.+..
T Consensus 120 ~~~~D~v~~~~---~~------------~---~~-~l~~~~~~LkpgG~lv~~~~~~~--~~~~~~~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 120 LPLPEAVFIGG---GG------------S---QA-LYDRLWEWLAPGTRIVANAVTLE--SETLLTQLHARHGGQLLRID 178 (204)
T ss_dssp SCCCSEEEECS---CC------------C---HH-HHHHHHHHSCTTCEEEEEECSHH--HHHHHHHHHHHHCSEEEEEE
T ss_pred CCCCCEEEECC---cc------------c---HH-HHHHHHHhcCCCcEEEEEecCcc--cHHHHHHHHHhCCCcEEEEE
Confidence 24699999765 21 1 23 78889999999999999876542 44566666777788777654
Q ss_pred e
Q 016441 180 E 180 (389)
Q Consensus 180 ~ 180 (389)
.
T Consensus 179 ~ 179 (204)
T 3njr_A 179 I 179 (204)
T ss_dssp E
T ss_pred e
Confidence 4
No 136
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=95.21 E-value=0.021 Score=47.03 Aligned_cols=111 Identities=14% Similarity=0.180 Sum_probs=68.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
++.+||=+|=|.=.++..|++.. .++++ .|-.+++.+ .++.|++...- .+.++ .-|+.+......-...+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~---~~v~~--vD~~~~~~~---~a~~~~~~~~~-~~~~~-~~d~~~~~~~~~~~~~~ 110 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG---WEAVL--VEKDPEAVR---LLKENVRRTGL-GARVV-ALPVEVFLPEAKAQGER 110 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT---CEEEE--ECCCHHHHH---HHHHHHHHHTC-CCEEE-CSCHHHHHHHHHHTTCC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC---CeEEE--EeCCHHHHH---HHHHHHHHcCC-ceEEE-eccHHHHHHhhhccCCc
Confidence 67899999999999999998762 23554 453333433 25666665433 45444 44665521110011247
Q ss_pred cceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC
Q 016441 103 FDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV 157 (389)
Q Consensus 103 FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 157 (389)
||.|+.|.|.. . .. .+++..+.+ ..+|+++|.+.++.....
T Consensus 111 ~D~i~~~~~~~-~-~~----------~~~~~~~~~--~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 111 FTVAFMAPPYA-M-DL----------AALFGELLA--SGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp EEEEEECCCTT-S-CT----------THHHHHHHH--HTCEEEEEEEEEEEETTS
T ss_pred eEEEEECCCCc-h-hH----------HHHHHHHHh--hcccCCCcEEEEEeCCcc
Confidence 99999998865 2 11 122333333 699999999999887654
No 137
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=95.11 E-value=0.14 Score=43.64 Aligned_cols=127 Identities=14% Similarity=0.014 Sum_probs=81.5
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCC-CCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC----
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGS-ASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH---- 95 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs-~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~---- 95 (389)
..+..+||=||=|.=.++..|++.++. ...|+|.-+.... ...++.++. -|++++...
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------------~~~~v~~~~-~d~~~~~~~~~~~ 82 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------------PIPNVYFIQ-GEIGKDNMNNIKN 82 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------------CCTTCEEEE-CCTTTTSSCCC--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------------CCCCceEEE-ccccchhhhhhcc
Confidence 456789999999999999999988753 4578887665521 013566554 377665410
Q ss_pred -C----------------CcCCCCcceEEEcCC-CCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC
Q 016441 96 -P----------------DLRTRKFDRIIFNFP-HAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV 157 (389)
Q Consensus 96 -~----------------~Lk~~~FDrIIFNFP-H~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 157 (389)
+ .+....||.|+.|++ |..+ ... .......++....++.+..+|+++|.+.++...+.
T Consensus 83 ~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g--~~~--~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 158 (201)
T 2plw_A 83 INYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIG--NKI--DDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS 158 (201)
T ss_dssp ---------CHHHHHHHHHHTTCCEEEEEECCCCCCCS--CHH--HHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred ccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCC--Ccc--cCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC
Confidence 0 033468999999973 4321 111 11222345677889999999999999999876653
Q ss_pred CCCcccHHHHHhh
Q 016441 158 PFSNWNIKELAIG 170 (389)
Q Consensus 158 PY~sWnIe~LAa~ 170 (389)
+.+.+....+.
T Consensus 159 --~~~~l~~~l~~ 169 (201)
T 2plw_A 159 --QTNNLKTYLKG 169 (201)
T ss_dssp --THHHHHHHHHT
T ss_pred --CHHHHHHHHHH
Confidence 34455544433
No 138
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=95.10 E-value=0.0096 Score=58.08 Aligned_cols=114 Identities=17% Similarity=0.150 Sum_probs=71.8
Q ss_pred CeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCCcc
Q 016441 25 HQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRKFD 104 (389)
Q Consensus 25 ~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~FD 104 (389)
.+||.||=|+-++++.|++.+. ...|++.-+| .++.+. +++++.......++|+. -||.+.-. .+...+||
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p-~~~v~~VEid--p~vi~~---Ar~~~~~~~~~rv~v~~-~Da~~~l~--~~~~~~fD 161 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYP-QSRNTVVELD--AELARL---SREWFDIPRAPRVKIRV-DDARMVAE--SFTPASRD 161 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHST-TCEEEEEESC--HHHHHH---HHHHSCCCCTTTEEEEE-SCHHHHHH--TCCTTCEE
T ss_pred CEEEEEECCcCHHHHHHHHHCC-CcEEEEEECC--HHHHHH---HHHhccccCCCceEEEE-CcHHHHHh--hccCCCCC
Confidence 3899999999999999999774 3467665555 333321 33443221223355544 46655321 12346899
Q ss_pred eEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC
Q 016441 105 RIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV 157 (389)
Q Consensus 105 rIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 157 (389)
.||.|.+.... ... ...-..||+.|..+|+++|.+.+.+....
T Consensus 162 vIi~D~~~~~~--~~~--------~L~t~efl~~~~r~LkpgGvlv~~~~~~~ 204 (317)
T 3gjy_A 162 VIIRDVFAGAI--TPQ--------NFTTVEFFEHCHRGLAPGGLYVANCGDHS 204 (317)
T ss_dssp EEEECCSTTSC--CCG--------GGSBHHHHHHHHHHEEEEEEEEEEEEECT
T ss_pred EEEECCCCccc--cch--------hhhHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 99999654321 110 00125899999999999999988886543
No 139
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=95.06 E-value=0.077 Score=46.94 Aligned_cols=149 Identities=12% Similarity=0.090 Sum_probs=86.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCH--HHHHHhhhhH---------HHHHHHHHhCC----------
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSY--DDVIQKYKRA---------KSNLDNLKKLG---------- 80 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSe--eeL~~KY~~A---------~~Ni~~Lr~~G---------- 80 (389)
.+..+||=||=|.=.++..|++.. ...++++-+... +.+.++.+.. ...+..++...
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACES--FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcc--cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 345689999998877777777642 135666654321 1111111110 00111111110
Q ss_pred ---CEEEeccccCCCCCCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC
Q 016441 81 ---TCILHGVDATTMELHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV 157 (389)
Q Consensus 81 ---v~VlfgVDATkL~~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 157 (389)
+.-....|++++..........||.|+.++-.-. +..+..-...+++.+..+|+|||.+.++...+.
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~----------~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 202 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDA----------ACPDLPAYRTALRNLGSLLKPGGFLVMVDALKS 202 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHH----------HCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSC
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhh----------hcCChHHHHHHHHHHHhhCCCCcEEEEEecCCC
Confidence 3135567888765322233478999998863211 111223356788999999999999988764332
Q ss_pred -------------CCCcccHHHHHhhCCcEEEEEeeCC
Q 016441 158 -------------PFSNWNIKELAIGSSLSLIWCSEFK 182 (389)
Q Consensus 158 -------------PY~sWnIe~LAa~aGL~L~~~~~F~ 182 (389)
+++.=.+.++.+++||.+++...+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 203 SYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp CEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred ceEEcCCccccccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 1222267788899999999876654
No 140
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=95.05 E-value=0.1 Score=47.21 Aligned_cols=108 Identities=16% Similarity=0.109 Sum_probs=69.7
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeccccCC-CCCCCC
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL-GTCILHGVDATT-MELHPD 97 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~-Gv~VlfgVDATk-L~~~~~ 97 (389)
...+..+||=||=|.=.++..||+.++.+..|++.-.+ ++..+ .|+.|++...-. .+++ ..-|+.+ +...
T Consensus 60 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s--~~~~~---~a~~~~~~~g~~~~v~~-~~~d~~~~l~~~-- 131 (248)
T 3tfw_A 60 RLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEAD--AHHAQ---VARENLQLAGVDQRVTL-REGPALQSLESL-- 131 (248)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECC--HHHHH---HHHHHHHHTTCTTTEEE-EESCHHHHHHTC--
T ss_pred hhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHcCCCCcEEE-EEcCHHHHHHhc--
Confidence 34567899999999999999999987544566665444 33332 256666543322 2333 3446655 2221
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
-....||.|+.+.+... ...||+.+..+|++||.|.+.
T Consensus 132 ~~~~~fD~V~~d~~~~~-----------------~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 132 GECPAFDLIFIDADKPN-----------------NPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp CSCCCCSEEEECSCGGG-----------------HHHHHHHHHHTCCTTCEEEEE
T ss_pred CCCCCeEEEEECCchHH-----------------HHHHHHHHHHhcCCCeEEEEe
Confidence 11358999999764211 235899999999999988775
No 141
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=95.03 E-value=0.049 Score=47.60 Aligned_cols=111 Identities=14% Similarity=0.108 Sum_probs=69.2
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcC
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk 99 (389)
...+..+||=||=|.=.++..||+.++.+..+++.-.+ ++..+ .++.|++...-.+-.-+..-|+.+.-....-.
T Consensus 55 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 129 (223)
T 3duw_A 55 QIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEAS--EKHAD---IARSNIERANLNDRVEVRTGLALDSLQQIENE 129 (223)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESC--HHHHH---HHHHHHHHTTCTTTEEEEESCHHHHHHHHHHT
T ss_pred HhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhc
Confidence 34567899999999999999999987534566655544 22222 35666654332221233444665421110001
Q ss_pred -CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 100 -TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 100 -~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
...||.|+.+.++.. ...+|..+..+|+++|.|.+.
T Consensus 130 ~~~~fD~v~~d~~~~~-----------------~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 130 KYEPFDFIFIDADKQN-----------------NPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp TCCCCSEEEECSCGGG-----------------HHHHHHHHHHTCCTTCEEEEE
T ss_pred CCCCcCEEEEcCCcHH-----------------HHHHHHHHHHhcCCCcEEEEe
Confidence 157999999866221 247889999999999977764
No 142
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=95.02 E-value=0.096 Score=43.28 Aligned_cols=121 Identities=12% Similarity=0.056 Sum_probs=79.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||=+|=|.=.++..|++ ...+++++-.+ .++.+ .++.|++...-..+.+ ...|+.+ .+...
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~~~-~~~d~~~-----~~~~~ 99 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYL--DGAIE---VTKQNLAKFNIKNCQI-IKGRAED-----VLDKL 99 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECS--HHHHH---HHHHHHHHTTCCSEEE-EESCHHH-----HGGGC
T ss_pred CCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCC--HHHHH---HHHHHHHHcCCCcEEE-EECCccc-----cccCC
Confidence 4677999999999999999988 34567776554 23332 2455554332112333 3445544 12336
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEE
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWC 178 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~ 178 (389)
.||.|+.+.| . + +..+++.+..+ ++|.+.++.... .....+.++.++.|+.+...
T Consensus 100 ~~D~i~~~~~--~-----~-----------~~~~l~~~~~~--~gG~l~~~~~~~--~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 100 EFNKAFIGGT--K-----N-----------IEKIIEILDKK--KINHIVANTIVL--ENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp CCSEEEECSC--S-----C-----------HHHHHHHHHHT--TCCEEEEEESCH--HHHHHHHHHHHHTTCEEEEE
T ss_pred CCcEEEECCc--c-----c-----------HHHHHHHHhhC--CCCEEEEEeccc--ccHHHHHHHHHHcCCeEEEE
Confidence 8999999999 1 1 34667777777 999999987543 34567788888888776654
No 143
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=95.00 E-value=0.024 Score=55.00 Aligned_cols=113 Identities=19% Similarity=0.257 Sum_probs=73.0
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH----HhCCCEEEeccccCCCCCCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNL----KKLGTCILHGVDATTMELHPD 97 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~L----r~~Gv~VlfgVDATkL~~~~~ 97 (389)
....+||-||=|+=.++..|++.. ....|++.-.|. ++.+ -|++|+..+ ....++++.+ |+.+.-. .
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~--~~l~---~Ar~~~~~~~~gl~~~rv~~~~~-D~~~~l~--~ 189 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDK--MVVD---VSKQFFPDVAIGYEDPRVNLVIG-DGVAFLK--N 189 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCH--HHHH---HHHHHCHHHHGGGGSTTEEEEES-CHHHHHH--T
T ss_pred CCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCH--HHHH---HHHHHHHhhccccCCCcEEEEEC-CHHHHHH--h
Confidence 456799999999999999999864 245777776653 2222 255566554 2334565543 6654311 1
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
+....||.||.|.++.-. .. .+ .....||+.+..+|+++|.+.+..
T Consensus 190 ~~~~~fDlIi~d~~~p~~--~~-------~~-l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 190 AAEGSYDAVIVDSSDPIG--PA-------KE-LFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp SCTTCEEEEEECCCCTTS--GG-------GG-GGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCccEEEECCCCccC--cc-------hh-hhHHHHHHHHHHhcCCCcEEEEec
Confidence 123679999999875321 11 11 113689999999999999988753
No 144
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=94.97 E-value=0.024 Score=49.72 Aligned_cols=111 Identities=14% Similarity=0.163 Sum_probs=72.0
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhC----CCCcEEeccccCHHHHHHhhhhHHHHHHHHH-----hCCCEEEeccccC
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFG----SASNICASSLDSYDDVIQKYKRAKSNLDNLK-----KLGTCILHGVDAT 90 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~g----s~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr-----~~Gv~VlfgVDAT 90 (389)
...+..+||-||=|.=.++..|++..+ ....+++.-.+ +++.+ .+++|++... ...+.+. ..|+.
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~~~~~v~~~-~~d~~ 150 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERV--KDLVN---FSLENIKRDKPELLKIDNFKII-HKNIY 150 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESC--HHHHH---HHHHHHHHHCGGGGSSTTEEEE-ECCGG
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCC--HHHHH---HHHHHHHHcCccccccCCEEEE-ECChH
Confidence 345678999999999999999998764 33467666544 33333 3566666553 2234443 45776
Q ss_pred CCCCCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC
Q 016441 91 TMELHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT 156 (389)
Q Consensus 91 kL~~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 156 (389)
+...........||.|+.+.+.-. ++..+..+|+++|.+.++.-.+
T Consensus 151 ~~~~~~~~~~~~fD~I~~~~~~~~--------------------~~~~~~~~LkpgG~lv~~~~~~ 196 (227)
T 2pbf_A 151 QVNEEEKKELGLFDAIHVGASASE--------------------LPEILVDLLAENGKLIIPIEED 196 (227)
T ss_dssp GCCHHHHHHHCCEEEEEECSBBSS--------------------CCHHHHHHEEEEEEEEEEEEET
T ss_pred hcccccCccCCCcCEEEECCchHH--------------------HHHHHHHhcCCCcEEEEEEccC
Confidence 632000022467999998866432 2366788999999999998754
No 145
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=94.95 E-value=0.31 Score=45.38 Aligned_cols=134 Identities=14% Similarity=0.152 Sum_probs=83.1
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCCCCCcC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~~~~Lk 99 (389)
+++ .+||=||=|.=.++..|++.+. ...++ ..|- ..+.+ .+++++....- ..++++. -|+.+ . +.
T Consensus 166 ~~~-~~vlDvG~G~G~~~~~l~~~~p-~~~~~--~~D~-~~~~~---~a~~~~~~~~~~~~v~~~~-~d~~~-~----~~ 231 (334)
T 2ip2_A 166 FRG-RSFVDVGGGSGELTKAILQAEP-SARGV--MLDR-EGSLG---VARDNLSSLLAGERVSLVG-GDMLQ-E----VP 231 (334)
T ss_dssp CTT-CEEEEETCTTCHHHHHHHHHCT-TCEEE--EEEC-TTCTH---HHHHHTHHHHHTTSEEEEE-SCTTT-C----CC
T ss_pred CCC-CEEEEeCCCchHHHHHHHHHCC-CCEEE--EeCc-HHHHH---HHHHHHhhcCCCCcEEEec-CCCCC-C----CC
Confidence 455 8999999999999999998873 33454 4554 33332 24455543322 2344443 35544 1 22
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC----------------------CC
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT----------------------TV 157 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~----------------------g~ 157 (389)
..||.|+.+..---. .+ .-...+++.+..+|+|+|.+.|.-.. |.
T Consensus 232 -~~~D~v~~~~vl~~~---~~---------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (334)
T 2ip2_A 232 -SNGDIYLLSRIIGDL---DE---------AASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGR 298 (334)
T ss_dssp -SSCSEEEEESCGGGC---CH---------HHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCC
T ss_pred -CCCCEEEEchhccCC---CH---------HHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCc
Confidence 469999987653221 11 11357788899999999999887321 11
Q ss_pred CCCcccHHHHHhhCCcEEEEEeeC
Q 016441 158 PFSNWNIKELAIGSSLSLIWCSEF 181 (389)
Q Consensus 158 PY~sWnIe~LAa~aGL~L~~~~~F 181 (389)
.++.=+++++.+++||..++..+-
T Consensus 299 ~~t~~e~~~ll~~aGf~~~~~~~~ 322 (334)
T 2ip2_A 299 HRTTEEVVDLLGRGGFAVERIVDL 322 (334)
T ss_dssp CCBHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCceeEEEEC
Confidence 122234566888899998887653
No 146
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=94.93 E-value=0.028 Score=48.67 Aligned_cols=109 Identities=17% Similarity=0.126 Sum_probs=71.5
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
-.+..+||=||=|.=.++..|++.. .++++.-.+ +++.+. ++.++. ..+-.-+...|+.++. ..
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s--~~~~~~---a~~~~~---~~~~~~~~~~d~~~~~-----~~ 112 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVM--PRAIGR---ACQRTK---RWSHISWAATDILQFS-----TA 112 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESC--HHHHHH---HHHHTT---TCSSEEEEECCTTTCC-----CS
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECC--HHHHHH---HHHhcc---cCCCeEEEEcchhhCC-----CC
Confidence 3456789999999999999998763 356664443 333321 333332 2333344566887765 24
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT 156 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 156 (389)
..||.|+.+...--. . +...+..+++.+..+|+++|.+.++....
T Consensus 113 ~~fD~v~~~~~l~~~---~--------~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYL---E--------DMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp CCEEEEEEESCGGGS---S--------SHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CCccEEEEccHHHhC---C--------CHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 789999998543322 1 12345678999999999999999976543
No 147
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=94.91 E-value=0.079 Score=45.60 Aligned_cols=127 Identities=17% Similarity=0.181 Sum_probs=75.4
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
++.+||=+|=|.=.++..|++. + ...++|.-.+. .+.+ .++.|++...- ++.++ .-|+.++. ..
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~-~-~~~v~~vD~~~--~~~~---~a~~~~~~~~~-~~~~~-~~d~~~~~-------~~ 112 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLL-G-AKEVICVEVDK--EAVD---VLIENLGEFKG-KFKVF-IGDVSEFN-------SR 112 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCH--HHHH---HHHHHTGGGTT-SEEEE-ESCGGGCC-------CC
T ss_pred CcCEEEEeeCCCCHHHHHHHHc-C-CCEEEEEECCH--HHHH---HHHHHHHHcCC-CEEEE-ECchHHcC-------CC
Confidence 5679999999999999999876 3 33566665542 2222 24555443221 34444 34777753 37
Q ss_pred cceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEEeeC
Q 016441 103 FDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWCSEF 181 (389)
Q Consensus 103 FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~~F 181 (389)
||.|+.|.|-.-. .. .+...|++.+..++ |.+.++.. ..+-..-.+.+.+++.|+.+.....+
T Consensus 113 ~D~v~~~~p~~~~-~~-----------~~~~~~l~~~~~~l---~~~~~~~~-~~~~~~~~~~~~l~~~g~~~~~~~~~ 175 (207)
T 1wy7_A 113 VDIVIMNPPFGSQ-RK-----------HADRPFLLKAFEIS---DVVYSIHL-AKPEVRRFIEKFSWEHGFVVTHRLTT 175 (207)
T ss_dssp CSEEEECCCCSSS-ST-----------TTTHHHHHHHHHHC---SEEEEEEE-CCHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCEEEEcCCCccc-cC-----------CchHHHHHHHHHhc---CcEEEEEe-CCcCCHHHHHHHHHHCCCeEEEEEEE
Confidence 9999999994332 11 11235566777777 55555442 12223334666778889877654443
No 148
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=94.80 E-value=0.16 Score=46.10 Aligned_cols=101 Identities=16% Similarity=0.154 Sum_probs=66.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||=||=|.=.++..|++ . +..++++-.+ .++.+. +..++ .++.+. ..|+..+. + ..
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~-~--~~~v~gvD~s--~~~~~~---a~~~~-----~~~~~~-~~d~~~~~----~-~~ 116 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ-S--GAEVLGTDNA--ATMIEK---ARQNY-----PHLHFD-VADARNFR----V-DK 116 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH-T--TCEEEEEESC--HHHHHH---HHHHC-----TTSCEE-ECCTTTCC----C-SS
T ss_pred CCCCEEEEecCCCCHHHHHHHh-C--CCeEEEEECC--HHHHHH---HHhhC-----CCCEEE-ECChhhCC----c-CC
Confidence 4567999999999999999988 2 3466665443 222221 22222 345544 34777654 2 36
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT 155 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 155 (389)
.||.|+.++.---. .| ...+++.+..+|+|||.+.++...
T Consensus 117 ~fD~v~~~~~l~~~---~d-----------~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 117 PLDAVFSNAMLHWV---KE-----------PEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp CEEEEEEESCGGGC---SC-----------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CcCEEEEcchhhhC---cC-----------HHHHHHHHHHhcCCCcEEEEEecC
Confidence 89999998753321 11 236888999999999999987654
No 149
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=94.75 E-value=0.038 Score=48.21 Aligned_cols=110 Identities=15% Similarity=0.170 Sum_probs=69.0
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeccccCCCCCCCC-
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG-TCILHGVDATTMELHPD- 97 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G-v~VlfgVDATkL~~~~~- 97 (389)
...+..+||=||=|.=.++..|++.++.+..|++.-.+ ++..+ .++.+++...-.+ +.++ .-|+.+.-....
T Consensus 61 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~v~~~-~~d~~~~~~~~~~ 134 (225)
T 3tr6_A 61 KLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVD--EKSTA---LAKEYWEKAGLSDKIGLR-LSPAKDTLAELIH 134 (225)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESC--HHHHH---HHHHHHHHTTCTTTEEEE-ESCHHHHHHHHHT
T ss_pred HhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCC--HHHHH---HHHHHHHHCCCCCceEEE-eCCHHHHHHHhhh
Confidence 34567899999999999999999887544566665544 33322 2555555433222 3333 345543211000
Q ss_pred -cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 98 -LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 98 -Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
.....||.|+.+.|... ...+|+.+..+|++||.|.+.
T Consensus 135 ~~~~~~fD~v~~~~~~~~-----------------~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 135 AGQAWQYDLIYIDADKAN-----------------TDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp TTCTTCEEEEEECSCGGG-----------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCCCccEEEECCCHHH-----------------HHHHHHHHHHhcCCCcEEEEe
Confidence 01168999998876221 335888999999999999874
No 150
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=94.66 E-value=0.18 Score=46.23 Aligned_cols=110 Identities=18% Similarity=0.202 Sum_probs=71.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCCCC--Cc
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMELHP--DL 98 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~~~--~L 98 (389)
.+..+||=||=|.=.++..|++.+....+++++-.+ +.+.+ .++.+++.... ..-.-+...|+.++.... .+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s--~~~~~---~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 109 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLS--ATMIK---TAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSV 109 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESC--HHHHH---HHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCC--HHHHH---HHHHHHHhccCCCCceEEEEcCHHhCCccccccc
Confidence 367899999999999999999876445677776554 22332 25555544311 112233456777764211 12
Q ss_pred CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 99 RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 99 k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
....||.|+.++.---. + ...+++.+..+|++||.+.|
T Consensus 110 ~~~~fD~V~~~~~l~~~----~-----------~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 110 DKQKIDMITAVECAHWF----D-----------FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp TSSCEEEEEEESCGGGS----C-----------HHHHHHHHHHHEEEEEEEEE
T ss_pred cCCCeeEEeHhhHHHHh----C-----------HHHHHHHHHHhcCCCcEEEE
Confidence 23789999998642211 1 45789999999999999987
No 151
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=94.66 E-value=0.088 Score=50.58 Aligned_cols=106 Identities=18% Similarity=0.171 Sum_probs=71.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.++.+||=||=|.=.++..|++. + ...++|.-.. + +.+ .|+.+++...-.+..-+..-|+.++. +...
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g-~~~v~gvD~s--~-~l~---~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~ 132 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-G-ARKVIGIECS--S-ISD---YAVKIVKANKLDHVVTIIKGKVEEVE----LPVE 132 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-T-CSEEEEEECS--T-HHH---HHHHHHHHTTCTTTEEEEESCTTTCC----CSSS
T ss_pred CCCCEEEEEeccchHHHHHHHHC-C-CCEEEEECcH--H-HHH---HHHHHHHHcCCCCcEEEEECcHHHcc----CCCC
Confidence 45789999999999999999987 3 4578887665 2 332 25555544332232345566777763 3457
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEE
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVH 150 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIH 150 (389)
+||.|+.+.+....... ..+..++..+..+|+|+|.+.
T Consensus 133 ~fD~Iis~~~~~~l~~~-----------~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 133 KVDIIISEWMGYCLFYE-----------SMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp CEEEEEECCCBBTBTBT-----------CCHHHHHHHHHHHEEEEEEEE
T ss_pred ceEEEEEccccccccCc-----------hhHHHHHHHHHHhCCCCCEEc
Confidence 89999999764443121 235578888899999999875
No 152
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=94.63 E-value=0.052 Score=52.49 Aligned_cols=127 Identities=13% Similarity=0.089 Sum_probs=82.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEe----ccccCCCCCCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILH----GVDATTMELHPD 97 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~Vlf----gVDATkL~~~~~ 97 (389)
.+..+||=||=|+=.++..|++. +.++++. |-.+.+ ++..++.|+.+.. ..|+..+.
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gv--D~s~~~----------~~~a~~~~~~~~~~~~~~~~~~~l~---- 166 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA---GVRHLGF--EPSSGV----------AAKAREKGIRVRTDFFEKATADDVR---- 166 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT---TCEEEEE--CCCHHH----------HHHHHTTTCCEECSCCSHHHHHHHH----
T ss_pred CCCCEEEEecCCCCHHHHHHHHc---CCcEEEE--CCCHHH----------HHHHHHcCCCcceeeechhhHhhcc----
Confidence 36779999999999999999875 2355554 432222 2233444554442 12232221
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC-------CC----------CCC
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT-------TV----------PFS 160 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~-------g~----------PY~ 160 (389)
+....||.|+.++----. .| ...||+.+..+|+|+|.+.++... .. .|+
T Consensus 167 ~~~~~fD~I~~~~vl~h~---~d-----------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s 232 (416)
T 4e2x_A 167 RTEGPANVIYAANTLCHI---PY-----------VQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFS 232 (416)
T ss_dssp HHHCCEEEEEEESCGGGC---TT-----------HHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECC
T ss_pred cCCCCEEEEEECChHHhc---CC-----------HHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCC
Confidence 234789999998542211 11 468999999999999999997542 00 022
Q ss_pred cccHHHHHhhCCcEEEEEeeC
Q 016441 161 NWNIKELAIGSSLSLIWCSEF 181 (389)
Q Consensus 161 sWnIe~LAa~aGL~L~~~~~F 181 (389)
.-.+..+++++||.+++...+
T Consensus 233 ~~~l~~ll~~aGf~~~~~~~~ 253 (416)
T 4e2x_A 233 ATSVQGMAQRCGFELVDVQRL 253 (416)
T ss_dssp HHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHcCCEEEEEEEc
Confidence 236888999999999988765
No 153
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=94.53 E-value=0.27 Score=42.44 Aligned_cols=106 Identities=16% Similarity=0.110 Sum_probs=68.9
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
-.+..+||-||=|.=.++..|++..+....++++-.+ +++.+ .+++++..+.-.++.+ ..-|+... . ...
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~v~~-~~~d~~~~---~-~~~ 144 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERI--PELAE---KAERTLRKLGYDNVIV-IVGDGTLG---Y-EPL 144 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESC--HHHHH---HHHHHHHHHTCTTEEE-EESCGGGC---C-GGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCC--HHHHH---HHHHHHHHcCCCCeEE-EECCcccC---C-CCC
Confidence 3567899999999999999999887543567666444 33333 2555665543223443 33455321 1 124
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT 156 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 156 (389)
..||.|+.+++--.. ...+..+|+++|.+.++..++
T Consensus 145 ~~fD~v~~~~~~~~~--------------------~~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 145 APYDRIYTTAAGPKI--------------------PEPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp CCEEEEEESSBBSSC--------------------CHHHHHTEEEEEEEEEEESSS
T ss_pred CCeeEEEECCchHHH--------------------HHHHHHHcCCCcEEEEEECCC
Confidence 679999999764322 026788999999999998655
No 154
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=94.38 E-value=0.51 Score=45.73 Aligned_cols=108 Identities=15% Similarity=0.295 Sum_probs=71.6
Q ss_pred ccCCCCCCeEEEEecCChhHHHHH-HHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCC
Q 016441 18 IKHYSSNHQILLVGEGDFSFSLCL-ALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHP 96 (389)
Q Consensus 18 ~~~Yss~~rILLVGEGDFSFSlSL-a~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~ 96 (389)
+....+.++||-||=|.-.++..+ |+.. +..|+|.-.+ +++.+ .|+++++.+.-..++++ .-||.++.
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~--ga~V~gIDis--~~~l~---~Ar~~~~~~gl~~v~~v-~gDa~~l~--- 185 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVY--GMRVNVVEIE--PDIAE---LSRKVIEGLGVDGVNVI-TGDETVID--- 185 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTT--CCEEEEEESS--HHHHH---HHHHHHHHHTCCSEEEE-ESCGGGGG---
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHcc--CCEEEEEECC--HHHHH---HHHHHHHhcCCCCeEEE-ECchhhCC---
Confidence 445678999999999998888655 4433 4466665444 44444 26777766543234443 45777653
Q ss_pred CcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC
Q 016441 97 DLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT 156 (389)
Q Consensus 97 ~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 156 (389)
...||.|+...- .++ ...+|+.+..+|+|||.+.+....+
T Consensus 186 ---d~~FDvV~~~a~------~~d-----------~~~~l~el~r~LkPGG~Lvv~~~~~ 225 (298)
T 3fpf_A 186 ---GLEFDVLMVAAL------AEP-----------KRRVFRNIHRYVDTETRIIYRTYTG 225 (298)
T ss_dssp ---GCCCSEEEECTT------CSC-----------HHHHHHHHHHHCCTTCEEEEEECCG
T ss_pred ---CCCcCEEEECCC------ccC-----------HHHHHHHHHHHcCCCcEEEEEcCcc
Confidence 478999987432 122 3478899999999999999876544
No 155
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=94.37 E-value=0.21 Score=46.90 Aligned_cols=133 Identities=11% Similarity=0.083 Sum_probs=81.4
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCCc
Q 016441 24 NHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRKF 103 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~F 103 (389)
..+||=||=|.=.++..|++.+. . +..|.+|- .++.+ .++.++....-.+-.-...-|+.+... .....|
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p-~--~~~~~~D~-~~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~~~ 249 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHP-Q--LTGQIWDL-PTTRD---AARKTIHAHDLGGRVEFFEKNLLDARN---FEGGAA 249 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCT-T--CEEEEEEC-GGGHH---HHHHHHHHTTCGGGEEEEECCTTCGGG---GTTCCE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCC-C--CeEEEEEC-HHHHH---HHHHHHHhcCCCCceEEEeCCcccCcc---cCCCCc
Confidence 67999999999999999999874 2 44556676 33333 244444432211112233446555321 123459
Q ss_pred ceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC------------------------CCCC
Q 016441 104 DRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT------------------------TVPF 159 (389)
Q Consensus 104 DrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~------------------------g~PY 159 (389)
|.|+.+.----. .| .-...+++.+..+|+|+|.+.|.-.. +..+
T Consensus 250 D~v~~~~vlh~~---~~---------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (352)
T 3mcz_A 250 DVVMLNDCLHYF---DA---------REAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELH 317 (352)
T ss_dssp EEEEEESCGGGS---CH---------HHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCC
T ss_pred cEEEEecccccC---CH---------HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcC
Confidence 999987543221 11 12457888999999999999885321 1122
Q ss_pred CcccHHHHHhhCCcEEEEE
Q 016441 160 SNWNIKELAIGSSLSLIWC 178 (389)
Q Consensus 160 ~sWnIe~LAa~aGL~L~~~ 178 (389)
+.=+++++.+++||.+++.
T Consensus 318 t~~e~~~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 318 PTPWIAGVVRDAGLAVGER 336 (352)
T ss_dssp CHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHCCCceeee
Confidence 3334667888999998883
No 156
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=94.33 E-value=0.12 Score=47.82 Aligned_cols=109 Identities=17% Similarity=0.250 Sum_probs=69.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCC-CCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeccccCCCCCCCCcC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGS-ASNICASSLDSYDDVIQKYKRAKSNLDNLKKL-GTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs-~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~-Gv~VlfgVDATkL~~~~~Lk 99 (389)
.++.+||=||=|.=.++++|++.++. +.+|| ..|-.+++.++ |+++++..... .++++ .-|+.++..
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~--gvD~s~~ml~~---A~~~~~~~~~~~~v~~~-~~D~~~~~~----- 137 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKII--AIDNSPAMIER---CRRHIDAYKAPTPVDVI-EGDIRDIAI----- 137 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEE--EEESCHHHHHH---HHHHHHTSCCSSCEEEE-ESCTTTCCC-----
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEE--EEECCHHHHHH---HHHHHHhhccCceEEEe-ecccccccc-----
Confidence 45789999999999999999988742 33454 56744555443 66665543322 23444 347777542
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEec
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHK 154 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk 154 (389)
..||.|+.||=-- + ..+ .-...+|+.+..+|+|||.+.|+-.
T Consensus 138 -~~~d~v~~~~~l~-~--~~~---------~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 138 -ENASMVVLNFTLQ-F--LEP---------SERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp -CSEEEEEEESCGG-G--SCH---------HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -cccccceeeeeee-e--cCc---------hhHhHHHHHHHHHcCCCcEEEEEec
Confidence 4599999987311 1 011 1123567888899999999988744
No 157
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=94.30 E-value=0.16 Score=48.68 Aligned_cols=105 Identities=20% Similarity=0.186 Sum_probs=70.5
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCCCCCcC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~~~~Lk 99 (389)
..++.+||=||=|.=.++..|++. + ...++|.-.+ + +.+ .|+++++...- ..+++ ..-|+.++. +.
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~gvD~s--~-~~~---~a~~~~~~~~~~~~i~~-~~~d~~~~~----~~ 128 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-G-AKKVLGVDQS--E-ILY---QAMDIIRLNKLEDTITL-IKGKIEEVH----LP 128 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESS--T-HHH---HHHHHHHHTTCTTTEEE-EESCTTTSC----CS
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-C-CCEEEEEChH--H-HHH---HHHHHHHHcCCCCcEEE-EEeeHHHhc----CC
Confidence 356789999999998899999886 3 4578887765 2 332 25556544321 12333 455777653 34
Q ss_pred CCCcceEEEcC-CCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEE
Q 016441 100 TRKFDRIIFNF-PHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVH 150 (389)
Q Consensus 100 ~~~FDrIIFNF-PH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIH 150 (389)
..+||.||.+. ++... +...+..++..+..+|++||.+.
T Consensus 129 ~~~~D~Ivs~~~~~~l~------------~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 129 VEKVDVIISEWMGYFLL------------FESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CSCEEEEEECCCBTTBT------------TTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CCcEEEEEEcCchhhcc------------CHHHHHHHHHHHHhhcCCCcEEE
Confidence 46899999987 44432 22245678888999999999886
No 158
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=94.27 E-value=0.15 Score=48.88 Aligned_cols=120 Identities=21% Similarity=0.216 Sum_probs=77.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
..+.+||=+|=|.=.||+. |+ + +..++|.-.+ .+..+ .++.|++...-.+-..++.-|+.++. .
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~-~~~V~~vD~s--~~ai~---~a~~n~~~n~l~~~v~~~~~D~~~~~-------~ 257 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--N-AKKIYAIDIN--PHAIE---LLKKNIKLNKLEHKIIPILSDVREVD-------V 257 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--T-SSEEEEEESC--HHHHH---HHHHHHHHTTCTTTEEEEESCGGGCC-------C
T ss_pred CCCCEEEEccCccCHHHHh-cc--C-CCEEEEEECC--HHHHH---HHHHHHHHcCCCCcEEEEECChHHhc-------C
Confidence 5778999999998888888 76 3 4566655443 32322 36677765432122334556777653 6
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEE
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIW 177 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~ 177 (389)
.||.|+.|-|+.+. .|+..+..+|+++|.+++.-+... ...-++.+.+.+++.+..
T Consensus 258 ~fD~Vi~dpP~~~~------------------~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~l~~~~~~~i~~ 313 (336)
T 2yx1_A 258 KGNRVIMNLPKFAH------------------KFIDKALDIVEEGGVIHYYTIGKD--FDKAIKLFEKKCDCEVLE 313 (336)
T ss_dssp CEEEEEECCTTTGG------------------GGHHHHHHHEEEEEEEEEEEEESS--SHHHHHHHHHHSEEEEEE
T ss_pred CCcEEEECCcHhHH------------------HHHHHHHHHcCCCCEEEEEEeecC--chHHHHHHHHhcCCcEEE
Confidence 79999999997752 678888999999999999877665 222233333333555443
No 159
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=94.23 E-value=0.31 Score=45.08 Aligned_cols=137 Identities=12% Similarity=0.092 Sum_probs=80.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHH-----HHHHh-----CCCEEEeccccCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNL-----DNLKK-----LGTCILHGVDATT 91 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni-----~~Lr~-----~Gv~VlfgVDATk 91 (389)
.++.+||=||=|.=.++.+|++. + ...++|+-+-+.+.+. .++.|+ +...- ..+.|. ..|..+
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~----~a~~n~~~N~~~~~~~~~~~~~~v~~~-~~~~~~ 150 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDPEILN----SLESNIREHTANSCSSETVKRASPKVV-PYRWGD 150 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCHHHHH----HHHHHHHTTCC----------CCCEEE-ECCTTS
T ss_pred cCCCeEEEecccccHHHHHHHHc-C-CCEEEEEeCCCHHHHH----HHHHHHHHhhhhhcccccCCCCCeEEE-EecCCC
Confidence 35679999999988899988875 3 3478888772233332 245555 22111 134443 122222
Q ss_pred CCCCC--CcCCCCcceEEE-cCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhccc---C--CCeEEEEecCCCC---CC
Q 016441 92 MELHP--DLRTRKFDRIIF-NFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLR---D--GGEVHVSHKTTVP---FS 160 (389)
Q Consensus 92 L~~~~--~Lk~~~FDrIIF-NFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~---~--~GeIHVTLk~g~P---Y~ 160 (389)
..... .+...+||.||. +-+|.- + .+..+++.+..+|+ + +|.+.|......| ..
T Consensus 151 ~~~~~~~~~~~~~fD~Ii~~dvl~~~----~-----------~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~ 215 (281)
T 3bzb_A 151 SPDSLQRCTGLQRFQVVLLADLLSFH----Q-----------AHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAER 215 (281)
T ss_dssp CTHHHHHHHSCSSBSEEEEESCCSCG----G-----------GHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------
T ss_pred ccHHHHhhccCCCCCEEEEeCcccCh----H-----------HHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchh
Confidence 11100 002468999997 433321 1 14567788889999 9 9999887766544 23
Q ss_pred cccHHHHHhhCC-cEEEEEee
Q 016441 161 NWNIKELAIGSS-LSLIWCSE 180 (389)
Q Consensus 161 sWnIe~LAa~aG-L~L~~~~~ 180 (389)
.-.+.+++++.| |.+.....
T Consensus 216 ~~~~~~~l~~~G~f~v~~~~~ 236 (281)
T 3bzb_A 216 DLAFFRLVNADGALIAEPWLS 236 (281)
T ss_dssp CTHHHHHHHHSTTEEEEEEEC
T ss_pred HHHHHHHHHhcCCEEEEEecc
Confidence 456777888999 99887644
No 160
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=94.22 E-value=0.14 Score=49.22 Aligned_cols=132 Identities=15% Similarity=0.044 Sum_probs=84.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||=+|=|.=.|+.++++.++...+|+|.-.|....- -| .++.++ .-|+.... ...
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~-----~a---------~~~~~~-~~D~~~~~-----~~~ 97 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALD-----LP---------PWAEGI-LADFLLWE-----PGE 97 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCC-----CC---------TTEEEE-ESCGGGCC-----CSS
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHH-----hC---------CCCcEE-eCChhhcC-----ccC
Confidence 34669999999999999999988754568888877753211 01 234443 44665542 236
Q ss_pred CcceEEEcCCCCCCCCCcc----chHHHHH-h----------HHHHHHHHHhhHhcccCCCeEEEEecCCCCC--CcccH
Q 016441 102 KFDRIIFNFPHAGFYGKED----NHLLIEM-H----------RSLVRDFFRNSSGMLRDGGEVHVSHKTTVPF--SNWNI 164 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED----~~r~Ir~-n----------r~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY--~sWnI 164 (389)
+||.||.|=|-........ .....+. . .++...|++.|..+|+++|.+.+.+.++--. ..=.+
T Consensus 98 ~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~l 177 (421)
T 2ih2_A 98 AFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALL 177 (421)
T ss_dssp CEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHH
T ss_pred CCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHH
Confidence 7999999999887432100 0011111 1 1256689999999999999999888664100 11246
Q ss_pred HHHHhhCCc
Q 016441 165 KELAIGSSL 173 (389)
Q Consensus 165 e~LAa~aGL 173 (389)
.+...+.++
T Consensus 178 r~~l~~~~~ 186 (421)
T 2ih2_A 178 REFLAREGK 186 (421)
T ss_dssp HHHHHHHSE
T ss_pred HHHHHhcCC
Confidence 666666676
No 161
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=94.21 E-value=0.12 Score=44.87 Aligned_cols=140 Identities=16% Similarity=0.175 Sum_probs=86.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhh-hhHHHHHHHHHhCCC--EEEeccccCCCCCCCCc
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKY-KRAKSNLDNLKKLGT--CILHGVDATTMELHPDL 98 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY-~~A~~Ni~~Lr~~Gv--~VlfgVDATkL~~~~~L 98 (389)
.+..+||=||=|.=.++..|++.+ .+..+++.-.+. ++.+.. ..+. +..++.|. ......|+.++..
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~--~~l~~~~~~a~---~~~~~~~~~~v~~~~~d~~~l~~---- 95 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADK--SRMEKISAKAA---AKPAKGGLPNLLYLWATAERLPP---- 95 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCG--GGGHHHHHHHT---SCGGGTCCTTEEEEECCSTTCCS----
T ss_pred cCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCH--HHHHHHHHHHH---HhhhhcCCCceEEEecchhhCCC----
Confidence 456789999999999999999875 345666654442 222211 0111 11222331 2334568887653
Q ss_pred CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHH---HHHHHhhHhcccCCCeEEEEecCCC-----------CC--Ccc
Q 016441 99 RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLV---RDFFRNSSGMLRDGGEVHVSHKTTV-----------PF--SNW 162 (389)
Q Consensus 99 k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL---~~FF~SA~~lL~~~GeIHVTLk~g~-----------PY--~sW 162 (389)
.... |.|...+|... .++..+ ..+++.+..+|+|+|.+.++..... |. ..|
T Consensus 96 ~~~~-d~v~~~~~~~~------------~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (218)
T 3mq2_A 96 LSGV-GELHVLMPWGS------------LLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDS 162 (218)
T ss_dssp CCCE-EEEEEESCCHH------------HHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHH
T ss_pred CCCC-CEEEEEccchh------------hhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHH
Confidence 2344 88887777432 122233 6889999999999999999864321 10 111
Q ss_pred ---cHHHHHhhCCcEEEEEeeCCCC
Q 016441 163 ---NIKELAIGSSLSLIWCSEFKIE 184 (389)
Q Consensus 163 ---nIe~LAa~aGL~L~~~~~F~~~ 184 (389)
.+..+.+++|+.+.+...++.+
T Consensus 163 ~~~~l~~~l~~aGf~i~~~~~~~~~ 187 (218)
T 3mq2_A 163 ADEWLAPRYAEAGWKLADCRYLEPE 187 (218)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEECHH
T ss_pred HHHHHHHHHHHcCCCceeeeccchh
Confidence 2666888999999998777654
No 162
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=94.20 E-value=0.044 Score=47.95 Aligned_cols=111 Identities=14% Similarity=0.111 Sum_probs=69.4
Q ss_pred cCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCCCCC
Q 016441 19 KHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMELHPD 97 (389)
Q Consensus 19 ~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~~~~ 97 (389)
....+..+||=||=|.=.++..|++.++.+..|++.-.+.. ..+ .+++|++...- ..+.++. -|+...-....
T Consensus 65 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~--~~~---~a~~~~~~~g~~~~i~~~~-~d~~~~~~~~~ 138 (229)
T 2avd_A 65 ARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQ--PPE---LGRPLWRQAEAEHKIDLRL-KPALETLDELL 138 (229)
T ss_dssp HHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSH--HHH---HHHHHHHHTTCTTTEEEEE-SCHHHHHHHHH
T ss_pred HHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHH--HHH---HHHHHHHHCCCCCeEEEEE-cCHHHHHHHHH
Confidence 34567789999999999999999988754557777666542 222 24455543221 1234433 35543211000
Q ss_pred cC--CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 98 LR--TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 98 Lk--~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
-. ...||.|+.+.|... ...+|+.+..+|+++|.|.+.
T Consensus 139 ~~~~~~~~D~v~~d~~~~~-----------------~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 139 AAGEAGTFDVAVVDADKEN-----------------CSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp HTTCTTCEEEEEECSCSTT-----------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCCCCCccEEEECCCHHH-----------------HHHHHHHHHHHcCCCeEEEEE
Confidence 01 167999999877221 246889999999999998883
No 163
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=94.19 E-value=0.24 Score=43.56 Aligned_cols=107 Identities=18% Similarity=0.208 Sum_probs=69.8
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCC-----CCcEEeccccCHHHHHHhhhhHHHHHHHHH-----hCCCEEEecccc
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGS-----ASNICASSLDSYDDVIQKYKRAKSNLDNLK-----KLGTCILHGVDA 89 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs-----~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr-----~~Gv~VlfgVDA 89 (389)
...+..+||-||=|.=.++..|++..+. ...+++.-.+ +++.+ .+++|++.+. ...+.+.. -|+
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~~~~~v~~~~-~d~ 154 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQ--AELVR---RSKANLNTDDRSMLDSGQLLIVE-GDG 154 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESC--HHHHH---HHHHHHHHHHHHHHHHTSEEEEE-SCG
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcC--HHHHH---HHHHHHHhcCccccCCCceEEEE-CCc
Confidence 3456789999999999999999987642 1356555443 34433 2556665543 44555543 466
Q ss_pred CCCCCCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC
Q 016441 90 TTMELHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT 156 (389)
Q Consensus 90 TkL~~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 156 (389)
.+. . .....||+|+.+.+-... ...+..+|+++|.+.++....
T Consensus 155 ~~~--~--~~~~~fD~I~~~~~~~~~--------------------~~~~~~~LkpgG~lvi~~~~~ 197 (227)
T 1r18_A 155 RKG--Y--PPNAPYNAIHVGAAAPDT--------------------PTELINQLASGGRLIVPVGPD 197 (227)
T ss_dssp GGC--C--GGGCSEEEEEECSCBSSC--------------------CHHHHHTEEEEEEEEEEESCS
T ss_pred ccC--C--CcCCCccEEEECCchHHH--------------------HHHHHHHhcCCCEEEEEEecC
Confidence 651 1 123679999988764321 256788999999999998753
No 164
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=94.09 E-value=0.047 Score=50.95 Aligned_cols=96 Identities=16% Similarity=0.081 Sum_probs=65.2
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHH----HHHhCCCEEEeccccCCCCCCCCc
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLD----NLKKLGTCILHGVDATTMELHPDL 98 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~----~Lr~~Gv~VlfgVDATkL~~~~~L 98 (389)
...+||.||=|+=.+++.++++ + ..+++.-.|. ++.+. |++++. .+....++++.+ ||.+.-
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~--~~i~~---ar~~~~~~~~~~~~~rv~~~~~-D~~~~~----- 137 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADE--KILDS---FISFFPHFHEVKNNKNFTHAKQ-LLDLDI----- 137 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCH--HHHGG---GTTTSTTHHHHHTCTTEEEESS-GGGSCC-----
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCH--HHHHH---HHHHHHhhccccCCCeEEEEec-hHHHHH-----
Confidence 4578999999999999999887 4 5777776663 22221 222322 233345666543 776532
Q ss_pred CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 99 RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 99 k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
.+||.||.+.+. . . +||+.+..+|+|+|.+.+..
T Consensus 138 --~~fD~Ii~d~~d-------p----~--------~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 138 --KKYDLIFCLQEP-------D----I--------HRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp --CCEEEEEESSCC-------C----H--------HHHHHHHTTEEEEEEEEEEE
T ss_pred --hhCCEEEECCCC-------h----H--------HHHHHHHHhcCCCcEEEEEc
Confidence 679999998421 1 1 19999999999999988864
No 165
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=94.03 E-value=0.14 Score=49.64 Aligned_cols=114 Identities=16% Similarity=0.215 Sum_probs=76.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCH-HHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSY-DDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSe-eeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
+-++||++|=||-+-++.++++. +...|+.--+|.. -++.++|= ..-|-..+..-.++|+.+ ||.+.-.. ..+
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~l-p~~~~~~~~dpRv~v~~~-Dg~~~l~~---~~~ 156 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYL-PNHNAGSYDDPRFKLVID-DGVNFVNQ---TSQ 156 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHC-HHHHTTGGGCTTEEEEES-CTTTTTSC---SSC
T ss_pred CCCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcC-ccccccccCCCcEEEEec-hHHHHHhh---ccc
Confidence 45689999999999999999865 3567888888843 24445551 112233355566777766 66654322 347
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
+||.||-+.+...+.+. .-.-..||+.|+..|+++|-+.+-
T Consensus 157 ~yDvIi~D~~dp~~~~~----------~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 157 TFDVIISDCTDPIGPGE----------SLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp CEEEEEESCCCCCCTTC----------CSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred cCCEEEEeCCCcCCCch----------hhcCHHHHHHHHHHhCCCCEEEEe
Confidence 89999999987543221 112358999999999999977653
No 166
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=94.02 E-value=0.23 Score=46.71 Aligned_cols=104 Identities=15% Similarity=0.157 Sum_probs=68.3
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
-.++++||=||=|.=.++..|++..+....+++.-.+ +++.+ .++++++...-.++.+. .-|+.++.. ..
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s--~~~~~---~a~~~~~~~g~~~v~~~-~~d~~~~~~----~~ 142 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYS--RKICE---IAKRNVERLGIENVIFV-CGDGYYGVP----EF 142 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESC--HHHHH---HHHHHHHHTTCCSEEEE-ESCGGGCCG----GG
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECC--HHHHH---HHHHHHHHcCCCCeEEE-ECChhhccc----cC
Confidence 3467899999999999999999876433457776655 22222 35666654332234443 447766321 23
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEec
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHK 154 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk 154 (389)
..||+|+.+.+--.. . +.+..+|+|+|.+.|+..
T Consensus 143 ~~fD~Iv~~~~~~~~-~-------------------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 143 SPYDVIFVTVGVDEV-P-------------------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CCEEEEEECSBBSCC-C-------------------HHHHHHEEEEEEEEEEBC
T ss_pred CCeEEEEEcCCHHHH-H-------------------HHHHHhcCCCcEEEEEEC
Confidence 679999999765442 0 345678999999999853
No 167
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=93.98 E-value=0.22 Score=42.79 Aligned_cols=100 Identities=15% Similarity=0.179 Sum_probs=64.9
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
+..+||=||=|.=.++..| + ...+++.-.+ +++.+. ++.+. .++.++. .|+.++. +....
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~-~~~v~~vD~s--~~~~~~---a~~~~-----~~~~~~~-~d~~~~~----~~~~~ 95 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----P-YPQKVGVEPS--EAMLAV---GRRRA-----PEATWVR-AWGEALP----FPGES 95 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----C-CSEEEEECCC--HHHHHH---HHHHC-----TTSEEEC-CCTTSCC----SCSSC
T ss_pred CCCeEEEECCCCCHhHHhC----C-CCeEEEEeCC--HHHHHH---HHHhC-----CCcEEEE-cccccCC----CCCCc
Confidence 6779999999888887777 2 2256655433 333321 33332 3556544 4777653 34578
Q ss_pred cceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC
Q 016441 103 FDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT 156 (389)
Q Consensus 103 FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 156 (389)
||.|+.++..--. ++ ...+++.+..+|+++|.+.|+....
T Consensus 96 fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 96 FDVVLLFTTLEFV---ED-----------VERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp EEEEEEESCTTTC---SC-----------HHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EEEEEEcChhhhc---CC-----------HHHHHHHHHHHcCCCCEEEEEecCC
Confidence 9999998653221 11 3478889999999999999987654
No 168
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=93.92 E-value=0.14 Score=46.47 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=66.9
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeccccCCCCCCCCcCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTC-ILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~-VlfgVDATkL~~~~~Lk~~ 101 (389)
+..+||=||=|.=.++..|++. +.++++.-.+ +.+.+ .++.++. ..|.. -....|+.++.. ..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s--~~~~~---~a~~~~~---~~~~~~~~~~~d~~~~~~-----~~ 183 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHN--ENSIA---FLNETKE---KENLNISTALYDINAANI-----QE 183 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHHH---HTTCCEEEEECCGGGCCC-----CS
T ss_pred CCCcEEEECCCCCHHHHHHHHC---CCeEEEEECC--HHHHH---HHHHHHH---HcCCceEEEEeccccccc-----cC
Confidence 6789999999999999999986 3466655443 33332 2444443 33432 233457766543 57
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
.||.|+.+.+-.-. ....+..+++.+..+|+++|.+.|..
T Consensus 184 ~fD~i~~~~~~~~~------------~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 184 NYDFIVSTVVFMFL------------NRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp CEEEEEECSSGGGS------------CGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEEccchhhC------------CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 89999998753321 11224578999999999999966543
No 169
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=93.91 E-value=0.5 Score=40.91 Aligned_cols=110 Identities=14% Similarity=0.041 Sum_probs=67.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH-----hCCCEEEeccccCCCCCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLK-----KLGTCILHGVDATTMELHP 96 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr-----~~Gv~VlfgVDATkL~~~~ 96 (389)
.+..+||=||=|.=.++..|++..+ ..++++.-.+ +++.+ .+++++.... ...+.++. -|+..+.
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s--~~~~~---~a~~~~~~~~~~~~~~~~v~~~~-~d~~~~~--- 97 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVS--YRSLE---IAQERLDRLRLPRNQWERLQLIQ-GALTYQD--- 97 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESC--HHHHH---HHHHHHTTCCCCHHHHTTEEEEE-CCTTSCC---
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECC--HHHHH---HHHHHHHHhcCCcccCcceEEEe-CCccccc---
Confidence 3567999999999999999998643 3466666554 23322 2344432110 11344443 3664432
Q ss_pred CcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEec
Q 016441 97 DLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHK 154 (389)
Q Consensus 97 ~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk 154 (389)
.....||.|+.+..---. ...-+..+++.+..+|+++|.+.++..
T Consensus 98 -~~~~~fD~v~~~~~l~~~------------~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 98 -KRFHGYDAATVIEVIEHL------------DLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp -GGGCSCSEEEEESCGGGC------------CHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred -ccCCCcCEEeeHHHHHcC------------CHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 334789999987642211 122356789999999999997776654
No 170
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=93.76 E-value=0.2 Score=53.35 Aligned_cols=148 Identities=16% Similarity=0.049 Sum_probs=90.0
Q ss_pred ccccccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeccccCCC
Q 016441 14 EEKWIKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL-GTCILHGVDATTM 92 (389)
Q Consensus 14 ~~K~~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~-Gv~VlfgVDATkL 92 (389)
..+++..+.++.+||=+|=|.=.||+.+|+. | +..|+| .|..+...+ .+++|++...-. .-.....-|+.+.
T Consensus 530 ~r~~l~~~~~g~~VLDlg~GtG~~sl~aa~~-g-a~~V~a--VD~s~~al~---~a~~N~~~ngl~~~~v~~i~~D~~~~ 602 (703)
T 3v97_A 530 ARRMLGQMSKGKDFLNLFSYTGSATVHAGLG-G-ARSTTT--VDMSRTYLE---WAERNLRLNGLTGRAHRLIQADCLAW 602 (703)
T ss_dssp HHHHHHHHCTTCEEEEESCTTCHHHHHHHHT-T-CSEEEE--EESCHHHHH---HHHHHHHHTTCCSTTEEEEESCHHHH
T ss_pred HHHHHHHhcCCCcEEEeeechhHHHHHHHHC-C-CCEEEE--EeCCHHHHH---HHHHHHHHcCCCccceEEEecCHHHH
Confidence 4566777788999999999988899988873 2 344554 553333333 367776543211 1123445566652
Q ss_pred CCCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCC
Q 016441 93 ELHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSS 172 (389)
Q Consensus 93 ~~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aG 172 (389)
-. ....+||.||.|-|..+. ++.. ..+.........++..|..+|+++|.+.++.+.....- + .+.-.+.|
T Consensus 603 l~---~~~~~fD~Ii~DPP~f~~-~~~~--~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~--~-~~~l~~~g 673 (703)
T 3v97_A 603 LR---EANEQFDLIFIDPPTFSN-SKRM--EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRM--D-LDGLAKLG 673 (703)
T ss_dssp HH---HCCCCEEEEEECCCSBC----------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCC--C-HHHHHHTT
T ss_pred HH---hcCCCccEEEECCccccC-Cccc--hhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccccc--C-HHHHHHcC
Confidence 11 123689999999998873 2211 00112345667788899999999999998877633211 1 34445677
Q ss_pred cEEEE
Q 016441 173 LSLIW 177 (389)
Q Consensus 173 L~L~~ 177 (389)
+.+..
T Consensus 674 ~~~~~ 678 (703)
T 3v97_A 674 LKAQE 678 (703)
T ss_dssp EEEEE
T ss_pred Cceee
Confidence 76544
No 171
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=93.73 E-value=0.17 Score=45.55 Aligned_cols=102 Identities=10% Similarity=0.121 Sum_probs=66.2
Q ss_pred CeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC--CCEEEeccccCCCCCCCCcCCCC
Q 016441 25 HQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL--GTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 25 ~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~--Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
.+||=||=|.=..++.||+.++.+..|++.-.+ ++..+ .|++|++...-. .++++ .-||.++-. .+....
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~g~~~~~i~~~-~gda~~~l~--~~~~~~ 129 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPE--SEHQR---QAKALFREAGYSPSRVRFL-LSRPLDVMS--RLANDS 129 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSC--HHHHH---HHHHHHHHTTCCGGGEEEE-CSCHHHHGG--GSCTTC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHcCCCcCcEEEE-EcCHHHHHH--HhcCCC
Confidence 399999999999999999987545566655444 33332 366666553321 23333 335554321 122468
Q ss_pred cceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 103 FDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 103 FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
||.|+.+.+.. + ...||+.+..+|+|||.|.+
T Consensus 130 fD~V~~d~~~~------~-----------~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 130 YQLVFGQVSPM------D-----------LKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp EEEEEECCCTT------T-----------HHHHHHHHHHHEEEEEEEEE
T ss_pred cCeEEEcCcHH------H-----------HHHHHHHHHHHcCCCcEEEE
Confidence 99999874321 1 23589999999999999887
No 172
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=93.70 E-value=0.43 Score=45.67 Aligned_cols=106 Identities=11% Similarity=0.134 Sum_probs=68.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC--EE-EeccccCCCCCCCCc
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGT--CI-LHGVDATTMELHPDL 98 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv--~V-lfgVDATkL~~~~~L 98 (389)
....+||=||=|.=.++..|++.+. ++-.|.+|. .++.+ .+++++ ++.|. .| ...-|+.+... .+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p---~~~~~~~D~-~~~~~---~a~~~~---~~~~~~~~v~~~~~d~~~~~~--~~ 245 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK---EVEVTIVDL-PQQLE---MMRKQT---AGLSGSERIHGHGANLLDRDV--PF 245 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST---TCEEEEEEC-HHHHH---HHHHHH---TTCTTGGGEEEEECCCCSSSC--CC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC---CCEEEEEeC-HHHHH---HHHHHH---HhcCcccceEEEEccccccCC--CC
Confidence 4567999999999999999999863 345677777 44443 244444 33442 22 33446655320 12
Q ss_pred CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 99 RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 99 k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
. ..||.|+.++----. .| +-...+++.+...|+|+|.|.|.
T Consensus 246 p-~~~D~v~~~~vlh~~---~~---------~~~~~~l~~~~~~L~pgG~l~i~ 286 (363)
T 3dp7_A 246 P-TGFDAVWMSQFLDCF---SE---------EEVISILTRVAQSIGKDSKVYIM 286 (363)
T ss_dssp C-CCCSEEEEESCSTTS---CH---------HHHHHHHHHHHHHCCTTCEEEEE
T ss_pred C-CCcCEEEEechhhhC---CH---------HHHHHHHHHHHHhcCCCcEEEEE
Confidence 2 579999987643221 11 12447788899999999999875
No 173
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=93.70 E-value=0.18 Score=43.73 Aligned_cols=105 Identities=14% Similarity=0.131 Sum_probs=67.6
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeccccCCCCCCCCcC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG-TCILHGVDATTMELHPDLR 99 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G-v~VlfgVDATkL~~~~~Lk 99 (389)
.....+||=||=|.=.++..|++.++.+..|++.-.+ ++..+ .+++|++...-.. ++++ .-|+.++-. .+.
T Consensus 54 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~v~~~-~~d~~~~~~--~~~ 125 (210)
T 3c3p_A 54 IKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPD--RDNVE---HARRMLHDNGLIDRVELQ-VGDPLGIAA--GQR 125 (210)
T ss_dssp HHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESC--HHHHH---HHHHHHHHHSGGGGEEEE-ESCHHHHHT--TCC
T ss_pred hhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHCCCCceEEEE-EecHHHHhc--cCC
Confidence 3467799999999999999999887534566665444 33332 3566665443212 3333 346654311 122
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
. ||.|+.+.+.. + ...+|+.+..+|+++|.+.+.
T Consensus 126 -~-fD~v~~~~~~~------~-----------~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 126 -D-IDILFMDCDVF------N-----------GADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp -S-EEEEEEETTTS------C-----------HHHHHHHHGGGEEEEEEEEEE
T ss_pred -C-CCEEEEcCChh------h-----------hHHHHHHHHHhcCCCeEEEEE
Confidence 4 99999985421 1 347889999999999998873
No 174
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=93.70 E-value=0.53 Score=43.53 Aligned_cols=118 Identities=14% Similarity=0.134 Sum_probs=72.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-----CC-CEEEeccccCCCCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-----LG-TCILHGVDATTMELH 95 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-----~G-v~VlfgVDATkL~~~ 95 (389)
.+..+||=||=|.=.++..|++. ....++++-.+ +++.+ .++.+...... .. -.-....|+..+...
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s--~~~l~---~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 105 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIA--DVSVK---QCQQRYEDMKNRRDSEYIFSAEFITADSSKELLI 105 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESC--HHHHH---HHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCST
T ss_pred CCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCC--HHHHH---HHHHHHHHhhhcccccccceEEEEEecccccchh
Confidence 35679999999988888888874 24567776444 23332 24445544421 11 122345577776422
Q ss_pred CCcC--CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC
Q 016441 96 PDLR--TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT 156 (389)
Q Consensus 96 ~~Lk--~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 156 (389)
..+. ...||.|+.++---- . -.+..-+..+|+.+..+|+|+|.+.++..+.
T Consensus 106 ~~~~~~~~~fD~V~~~~~l~~---~-------~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 106 DKFRDPQMCFDICSCQFVCHY---S-------FESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TTCSSTTCCEEEEEEETCGGG---G-------GGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred hhcccCCCCEEEEEEecchhh---c-------cCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 2232 358999999873211 0 0122335689999999999999999987654
No 175
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=93.70 E-value=0.39 Score=45.48 Aligned_cols=132 Identities=16% Similarity=0.113 Sum_probs=81.9
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
++...+||=||=|.=.++..|++.+. ++.+|.+|-.+.+.++ +++.....+-.-...-|+.. . +.
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p---~~~~~~~D~~~~~~~~------~~~~~~~~~~v~~~~~d~~~--~---~p- 246 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHP---GLQGVLLDRAEVVARH------RLDAPDVAGRWKVVEGDFLR--E---VP- 246 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCT---TEEEEEEECHHHHTTC------CCCCGGGTTSEEEEECCTTT--C---CC-
T ss_pred ccCCceEEEECCccCHHHHHHHHHCC---CCEEEEecCHHHhhcc------cccccCCCCCeEEEecCCCC--C---CC-
Confidence 45677999999999999999999873 4666778864433210 11100111112223445541 1 11
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC--C--C------------------C
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT--T--V------------------P 158 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~--g--~------------------P 158 (389)
.||.|+.+.----. .| .-...+++.+..+|+|||.+.|.-.. . . .
T Consensus 247 -~~D~v~~~~vlh~~---~d---------~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~ 313 (348)
T 3lst_A 247 -HADVHVLKRILHNW---GD---------EDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQE 313 (348)
T ss_dssp -CCSEEEEESCGGGS---CH---------HHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCC
T ss_pred -CCcEEEEehhccCC---CH---------HHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcC
Confidence 79999987643222 11 11347889999999999999885321 1 1 1
Q ss_pred CCcccHHHHHhhCCcEEEEEee
Q 016441 159 FSNWNIKELAIGSSLSLIWCSE 180 (389)
Q Consensus 159 Y~sWnIe~LAa~aGL~L~~~~~ 180 (389)
++.=++.++.+++||..++..+
T Consensus 314 ~t~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 314 RTAAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp CBHHHHHHHHHHTTEEEEEEEE
T ss_pred CCHHHHHHHHHHCCCceEEEEE
Confidence 2233466788999999998876
No 176
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=93.63 E-value=0.067 Score=47.69 Aligned_cols=110 Identities=16% Similarity=0.199 Sum_probs=68.4
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeccccCCC-CCC---
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG-TCILHGVDATTM-ELH--- 95 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G-v~VlfgVDATkL-~~~--- 95 (389)
..+..+||-||=|.=.++..|++.++.+..+++.-.+ +++.+ .++++++...-.+ +.+. .-|+.+. ...
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~g~~~~v~~~-~~d~~~~~~~~~~~ 131 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVS--EEWTN---VARKYWKENGLENKIFLK-LGSALETLQVLIDS 131 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESC--HHHHH---HHHHHHHHTTCGGGEEEE-ESCHHHHHHHHHHC
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHcCCCCCEEEE-ECCHHHHHHHHHhh
Confidence 3467899999999999999999987545577766554 33322 2455554322111 3333 3355431 100
Q ss_pred -------CCcCC--CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 96 -------PDLRT--RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 96 -------~~Lk~--~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
..+.. ..||.|+.++. .++ +..+|+.+..+|+++|.+.+.-
T Consensus 132 ~~~~~~~~~f~~~~~~fD~I~~~~~------~~~-----------~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 132 KSAPSWASDFAFGPSSIDLFFLDAD------KEN-----------YPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp SSCCGGGTTTCCSTTCEEEEEECSC------GGG-----------HHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccccccccccCCCCCcCEEEEeCC------HHH-----------HHHHHHHHHHHcCCCeEEEEEc
Confidence 01112 67999999842 111 2378999999999999999864
No 177
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=93.60 E-value=0.45 Score=41.76 Aligned_cols=115 Identities=11% Similarity=0.095 Sum_probs=71.8
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeccccCCC-CCCC-
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG-TCILHGVDATTM-ELHP- 96 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G-v~VlfgVDATkL-~~~~- 96 (389)
...+..+||=||=|.=.++..||+.++.+..|+|.-.+ +++.+ .|++|++...-.+ ++++ .-|+.+. ....
T Consensus 55 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~v~~~-~~d~~~~l~~~~~ 128 (221)
T 3u81_A 55 REYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEIN--PDCAA---ITQQMLNFAGLQDKVTIL-NGASQDLIPQLKK 128 (221)
T ss_dssp HHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESC--HHHHH---HHHHHHHHHTCGGGEEEE-ESCHHHHGGGTTT
T ss_pred HhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCC--hHHHH---HHHHHHHHcCCCCceEEE-ECCHHHHHHHHHH
Confidence 34467899999999999999999877545566665544 33333 3667776654222 4443 4466442 2110
Q ss_pred CcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC
Q 016441 97 DLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT 155 (389)
Q Consensus 97 ~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 155 (389)
......||.|+.+.++... .-...++..+ .+|+|+|.|.+.-..
T Consensus 129 ~~~~~~fD~V~~d~~~~~~--------------~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 129 KYDVDTLDMVFLDHWKDRY--------------LPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp TSCCCCCSEEEECSCGGGH--------------HHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred hcCCCceEEEEEcCCcccc--------------hHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 1122689999998644321 1123577778 999999998876444
No 178
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=93.49 E-value=0.21 Score=47.39 Aligned_cols=105 Identities=19% Similarity=0.172 Sum_probs=69.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeccccCCCCCCCCcCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG-TCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G-v~VlfgVDATkL~~~~~Lk~ 100 (389)
.++.+||=||=|.=.++..+++. + ...++|.-.+ + +.+ .|+++++...-.+ +++ ..-|+.++. +..
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~~vD~s--~-~~~---~a~~~~~~~~~~~~i~~-~~~d~~~~~----~~~ 103 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH-G-AKHVIGVDMS--S-IIE---MAKELVELNGFSDKITL-LRGKLEDVH----LPF 103 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-C-CSEEEEEESS--T-HHH---HHHHHHHHTTCTTTEEE-EESCTTTSC----CSS
T ss_pred cCCCEEEEecCccHHHHHHHHHC-C-CCEEEEEChH--H-HHH---HHHHHHHHcCCCCCEEE-EECchhhcc----CCC
Confidence 45779999999998899988876 3 4578887765 2 222 2555554322112 343 445776653 334
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEE
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVH 150 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIH 150 (389)
.+||.||.+.+..+.... ..+..++..+..+|+|+|.+.
T Consensus 104 ~~~D~Ivs~~~~~~l~~~-----------~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 104 PKVDIIISEWMGYFLLYE-----------SMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp SCEEEEEECCCBTTBSTT-----------CCHHHHHHHHHHHEEEEEEEE
T ss_pred CcccEEEEeCchhhcccH-----------HHHHHHHHHHHhhcCCCeEEE
Confidence 689999999774332111 224577888899999999886
No 179
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=93.42 E-value=0.14 Score=45.97 Aligned_cols=101 Identities=13% Similarity=0.151 Sum_probs=66.7
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
+..+||=||=|.=.++..|++. +.++++.-.+ +++.+. ++.+.. + +....|+.++. +....
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s--~~~l~~---a~~~~~-----~--~~~~~d~~~~~----~~~~~ 114 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPS--KEMLEV---AREKGV-----K--NVVEAKAEDLP----FPSGA 114 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESC--HHHHHH---HHHHTC-----S--CEEECCTTSCC----SCTTC
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCC--HHHHHH---HHhhcC-----C--CEEECcHHHCC----CCCCC
Confidence 6779999999999999999875 2456665433 333321 222221 2 25566887764 34578
Q ss_pred cceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC
Q 016441 103 FDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT 155 (389)
Q Consensus 103 FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 155 (389)
||.|+.+++-... .+ + ...+++.+..+|+++|.+.++..+
T Consensus 115 fD~v~~~~~~~~~--~~--------~---~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 115 FEAVLALGDVLSY--VE--------N---KDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp EEEEEECSSHHHH--CS--------C---HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred EEEEEEcchhhhc--cc--------c---HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 9999986532110 00 1 567889999999999999998754
No 180
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=93.41 E-value=0.9 Score=40.82 Aligned_cols=125 Identities=16% Similarity=0.137 Sum_probs=79.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeccccCCCCCCCCcCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL-GTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~-Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
.+..+||=||=|.=.++..|++. +..++++-.+. .+.+ ..++. ++.+ ..-|++++. +..
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~--~~~~----------~a~~~~~~~~-~~~d~~~~~----~~~ 92 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQ---GLFVYAVEPSI--VMRQ----------QAVVHPQVEW-FTGYAENLA----LPD 92 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTT---TCEEEEECSCH--HHHH----------SSCCCTTEEE-ECCCTTSCC----SCT
T ss_pred CCCCEEEEEcCcccHHHHHHHhC---CCEEEEEeCCH--HHHH----------HHHhccCCEE-EECchhhCC----CCC
Confidence 56789999999999999999872 35676665442 2222 11111 3333 345676643 345
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCC-CCcc-----------------
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVP-FSNW----------------- 162 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P-Y~sW----------------- 162 (389)
..||.|+.++.---. +| ...+++.+..+|+ ||.+.+.-..... ...|
T Consensus 93 ~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (261)
T 3ege_A 93 KSVDGVISILAIHHF---SH-----------LEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLP 157 (261)
T ss_dssp TCBSEEEEESCGGGC---SS-----------HHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCC
T ss_pred CCEeEEEEcchHhhc---cC-----------HHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCC
Confidence 789999998753221 22 3478899999999 9977666554211 1222
Q ss_pred ---cHHHHHhhCCcEEEEEeeCC
Q 016441 163 ---NIKELAIGSSLSLIWCSEFK 182 (389)
Q Consensus 163 ---nIe~LAa~aGL~L~~~~~F~ 182 (389)
.+. +.+++||..++...+.
T Consensus 158 ~~~~~~-~l~~aGF~~v~~~~~~ 179 (261)
T 3ege_A 158 LDEQIN-LLQENTKRRVEAIPFL 179 (261)
T ss_dssp HHHHHH-HHHHHHCSEEEEEECC
T ss_pred CHHHHH-HHHHcCCCceeEEEec
Confidence 244 7888899887776664
No 181
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=93.40 E-value=0.24 Score=43.70 Aligned_cols=107 Identities=14% Similarity=0.120 Sum_probs=68.3
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcC
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk 99 (389)
...+..+||=||=|.=.++..|++. +.+++++-.+ .++.+ .+..++ .-...++.+ ...|+.++. +.
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s--~~~~~---~a~~~~-~~~~~~~~~-~~~d~~~~~----~~ 101 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDAD--AAMLE---VFRQKI-AGVDRKVQV-VQADARAIP----LP 101 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESC--HHHHH---HHHHHT-TTSCTTEEE-EESCTTSCC----SC
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECC--HHHHH---HHHHHh-hccCCceEE-EEcccccCC----CC
Confidence 4567789999999998999999875 2466665443 33332 133343 000122333 345776653 34
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEec
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHK 154 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk 154 (389)
...||.|+.++.---. .| ...+++.+..+|++||.+.++..
T Consensus 102 ~~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~~~~~ 142 (263)
T 2yqz_A 102 DESVHGVIVVHLWHLV---PD-----------WPKVLAEAIRVLKPGGALLEGWD 142 (263)
T ss_dssp TTCEEEEEEESCGGGC---TT-----------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCeeEEEECCchhhc---CC-----------HHHHHHHHHHHCCCCcEEEEEec
Confidence 5789999998653221 11 24688889999999999999843
No 182
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=93.35 E-value=0.14 Score=49.81 Aligned_cols=110 Identities=20% Similarity=0.173 Sum_probs=72.1
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcC
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk 99 (389)
+..++.+||=||=|.=.++..|+++ | ...|+|.-.. +.+ + .++.+++...-.+...+..-|+.++.. .
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~-g-~~~V~gvD~s--~~~-~---~a~~~~~~~~~~~~v~~~~~d~~~~~~----~ 127 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQA-G-ARKVYAVEAT--KMA-D---HARALVKANNLDHIVEVIEGSVEDISL----P 127 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHT-T-CSEEEEEESS--TTH-H---HHHHHHHHTTCTTTEEEEESCGGGCCC----S
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhc-C-CCEEEEEccH--HHH-H---HHHHHHHHcCCCCeEEEEECchhhcCc----C
Confidence 4456789999999999999999886 3 3478887665 222 2 244454433222223445567777642 2
Q ss_pred CCCcceEEEcC-CCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEec
Q 016441 100 TRKFDRIIFNF-PHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHK 154 (389)
Q Consensus 100 ~~~FDrIIFNF-PH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk 154 (389)
.+||.||.|. +|... . + ..+..+++.+..+|+|+|.+.++..
T Consensus 128 -~~~D~Iv~~~~~~~l~-~-e----------~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 128 -EKVDVIISEWMGYFLL-R-E----------SMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp -SCEEEEEECCCBTTBT-T-T----------CTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred -CcceEEEEcChhhccc-c-h----------HHHHHHHHHHHhhCCCCeEEEEecC
Confidence 7899999987 44432 1 1 1256788888899999998865544
No 183
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=93.32 E-value=0.17 Score=45.11 Aligned_cols=104 Identities=20% Similarity=0.164 Sum_probs=67.0
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeccccCCCCCCCCcCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL-GTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~-Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
.+..+||=||=|.=.++..||+... ...|++.-.+ ++..+ .|+.|++...-. .+.+ ..-|+.+.-.. .+ .
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~v~~-~~~d~~~~~~~-~~-~ 140 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISD-DIHVTTIERN--ETMIQ---YAKQNLATYHFENQVRI-IEGNALEQFEN-VN-D 140 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECC--HHHHH---HHHHHHHHTTCTTTEEE-EESCGGGCHHH-HT-T
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECC--HHHHH---HHHHHHHHcCCCCcEEE-EECCHHHHHHh-hc-c
Confidence 4678999999999999999998542 4566655444 33332 255665543321 2343 34466553110 11 4
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
..||.|+.+.+... +..||+.+..+|+++|.|.+
T Consensus 141 ~~fD~V~~~~~~~~-----------------~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 141 KVYDMIFIDAAKAQ-----------------SKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp SCEEEEEEETTSSS-----------------HHHHHHHHGGGEEEEEEEEE
T ss_pred CCccEEEEcCcHHH-----------------HHHHHHHHHHhcCCCeEEEE
Confidence 67999998854221 34699999999999999977
No 184
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=93.15 E-value=0.39 Score=40.80 Aligned_cols=125 Identities=10% Similarity=0.024 Sum_probs=75.0
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
+..+||=||=|.=.++..|++.. +++|.-.+ +++.+. ..++.++ .-|+.+ .+....
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s--~~~~~~------------~~~~~~~-~~d~~~-----~~~~~~ 78 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN----TVVSTDLN--IRALES------------HRGGNLV-RADLLC-----SINQES 78 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS----EEEEEESC--HHHHHT------------CSSSCEE-ECSTTT-----TBCGGG
T ss_pred CCCeEEEeccCccHHHHHHHhcC----cEEEEECC--HHHHhc------------ccCCeEE-ECChhh-----hcccCC
Confidence 45699999999999999998753 56555443 333332 2345543 335544 123378
Q ss_pred cceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEEe
Q 016441 103 FDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWCS 179 (389)
Q Consensus 103 FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~ 179 (389)
||.|+.|.|..-....+. ...-.....++..+++.+ ++|.+.+..... ...-.+.++.+++|+......
T Consensus 79 fD~i~~n~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l-----pgG~l~~~~~~~--~~~~~l~~~l~~~gf~~~~~~ 147 (170)
T 3q87_B 79 VDVVVFNPPYVPDTDDPI-IGGGYLGREVIDRFVDAV-----TVGMLYLLVIEA--NRPKEVLARLEERGYGTRILK 147 (170)
T ss_dssp CSEEEECCCCBTTCCCTT-TBCCGGGCHHHHHHHHHC-----CSSEEEEEEEGG--GCHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEECCCCccCCcccc-ccCCcchHHHHHHHHhhC-----CCCEEEEEEecC--CCHHHHHHHHHHCCCcEEEEE
Confidence 999999999663211000 000001234555555544 999998876432 234567778889999877643
No 185
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=92.93 E-value=2.3 Score=37.82 Aligned_cols=150 Identities=15% Similarity=0.049 Sum_probs=80.0
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeccccCC-CCCCCCcC-
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG-TCILHGVDATT-MELHPDLR- 99 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G-v~VlfgVDATk-L~~~~~Lk- 99 (389)
+..+||=+|=|.=.++..|++... +..++|.-.+ +++.+ .|+.|++...-.+ +.++ .-|+.+ +.....-.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s--~~~~~---~a~~~~~~~~~~~~v~~~-~~d~~~~~~~~~~~~~ 137 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVD--DMCFN---YAKKNVEQNNLSDLIKVV-KVPQKTLLMDALKEES 137 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESC--HHHHH---HHHHHHHHTTCTTTEEEE-ECCTTCSSTTTSTTCC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECC--HHHHH---HHHHHHHHcCCCccEEEE-Ecchhhhhhhhhhccc
Confidence 467899999998888888887652 3456665444 33333 3666765432222 4444 447766 22221111
Q ss_pred CCCcceEEEcCCCCCCCCC-cc-chHHHHH---h----------------HHHHHHHHHhhHhcccCCCeEEEEecCCCC
Q 016441 100 TRKFDRIIFNFPHAGFYGK-ED-NHLLIEM---H----------------RSLVRDFFRNSSGMLRDGGEVHVSHKTTVP 158 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gk-ED-~~r~Ir~---n----------------r~LL~~FF~SA~~lL~~~GeIHVTLk~g~P 158 (389)
...||.|+.|-|....... .. ..+.++. . -.++..++..+..+|+++|.++..+-..
T Consensus 138 ~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~~~~~-- 215 (254)
T 2h00_A 138 EIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKK-- 215 (254)
T ss_dssp SCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESST--
T ss_pred CCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEEECCCCh--
Confidence 2579999999887653100 00 0000100 0 1123334445566777778776544221
Q ss_pred CCcccHHHHHhhCCcEEEEEeeC
Q 016441 159 FSNWNIKELAIGSSLSLIWCSEF 181 (389)
Q Consensus 159 Y~sWnIe~LAa~aGL~L~~~~~F 181 (389)
...=.+.++.+++|+.-++...+
T Consensus 216 ~~~~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 216 CSLAPLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp TSHHHHHHHHHHTTCSEEEEEEE
T ss_pred hHHHHHHHHHHHcCCCceEEEEE
Confidence 12124667888999977665544
No 186
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=92.93 E-value=0.56 Score=40.28 Aligned_cols=102 Identities=18% Similarity=0.177 Sum_probs=66.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||=||=|.=.++..|++. +.++++.-.+ +++.+ .+++|++.+.-.++.+ ..-|+.+.. ....
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~v~~-~~~d~~~~~----~~~~ 142 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERI--KGLQW---QARRRLKNLDLHNVST-RHGDGWQGW----QARA 142 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESC--HHHHH---HHHHHHHHTTCCSEEE-EESCGGGCC----GGGC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecC--HHHHH---HHHHHHHHcCCCceEE-EECCcccCC----ccCC
Confidence 56789999999999999999987 3567776554 33333 2556655433223333 334665532 1347
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT 156 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 156 (389)
.||.|+.+.+.... . ..+..+|+++|.+.+++.++
T Consensus 143 ~~D~i~~~~~~~~~---~-----------------~~~~~~L~pgG~lv~~~~~~ 177 (210)
T 3lbf_A 143 PFDAIIVTAAPPEI---P-----------------TALMTQLDEGGILVLPVGEE 177 (210)
T ss_dssp CEEEEEESSBCSSC---C-----------------THHHHTEEEEEEEEEEECSS
T ss_pred CccEEEEccchhhh---h-----------------HHHHHhcccCcEEEEEEcCC
Confidence 89999997433221 0 03678999999999999873
No 187
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=92.89 E-value=0.81 Score=40.27 Aligned_cols=103 Identities=20% Similarity=0.140 Sum_probs=69.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||=||=|.=.++..|++.+. +..++++-.+ .++.+. +..+ ..++.+. ..|+.++. ...
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s--~~~~~~---a~~~-----~~~~~~~-~~d~~~~~-----~~~ 94 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSD--DDMLEK---AADR-----LPNTNFG-KADLATWK-----PAQ 94 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESC--HHHHHH---HHHH-----STTSEEE-ECCTTTCC-----CSS
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECC--HHHHHH---HHHh-----CCCcEEE-ECChhhcC-----ccC
Confidence 4567999999999999999998873 4577776554 222221 2222 1245444 45777654 246
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT 155 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 155 (389)
.||.|+.++.---. +| ...+++.+..+|+++|.+.++...
T Consensus 95 ~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 95 KADLLYANAVFQWV---PD-----------HLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp CEEEEEEESCGGGS---TT-----------HHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred CcCEEEEeCchhhC---CC-----------HHHHHHHHHHhcCCCeEEEEEeCC
Confidence 79999998753321 11 346888999999999999998754
No 188
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=92.82 E-value=0.48 Score=45.36 Aligned_cols=106 Identities=19% Similarity=0.128 Sum_probs=68.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCCCCCcCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
.++.+||=||-|.=.++..+++. + ...++|.-.+. .+ + .++.+++...- ..+++ ..-|+.++. +.
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~~vD~s~--~~-~---~a~~~~~~~~l~~~v~~-~~~d~~~~~----~~- 114 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST--MA-Q---HAEVLVKSNNLTDRIVV-IPGKVEEVS----LP- 114 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECST--HH-H---HHHHHHHHTTCTTTEEE-EESCTTTCC----CS-
T ss_pred CCcCEEEEcCCCccHHHHHHHhC-C-CCEEEEECCHH--HH-H---HHHHHHHHcCCCCcEEE-EEcchhhCC----CC-
Confidence 36779999999999999999885 3 45788877652 22 2 24555543221 12444 445776653 22
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
.+||.||.+.+.... ..++ +..+|..+..+|+++|.+.++.
T Consensus 115 ~~~D~Ivs~~~~~~~-~~~~-----------~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 115 EQVDIIISEPMGYML-FNER-----------MLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp SCEEEEEECCCBTTB-TTTS-----------HHHHHHHGGGGEEEEEEEESCE
T ss_pred CceeEEEEeCchhcC-ChHH-----------HHHHHHHHHhhcCCCeEEEEec
Confidence 579999999763221 1111 3456678899999999987654
No 189
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=92.71 E-value=0.21 Score=46.27 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=28.5
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEecccc
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLD 57 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlD 57 (389)
...+||=||=|.=.++..|++.++ +..|+++-.+
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis 79 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDID 79 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESC
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCC
Confidence 467999999999999999999885 4578877666
No 190
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=92.71 E-value=0.35 Score=43.28 Aligned_cols=120 Identities=18% Similarity=0.162 Sum_probs=68.6
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHH-------------------------
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNL------------------------- 76 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~L------------------------- 76 (389)
...+||=+|=|.=.|+..|++.. ....+|+|+-.+.. .+ + .|+.|+...
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~-~l-~---~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPA-PL-E---LAAKNLALLSPAGLTARELERREQSERFGKPSYL 125 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHH-HH-H---HHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHH-HH-H---HHHHHHHHhhhccccccchhhhhhhhhcccccch
Confidence 45689999888888999998762 12356777765532 22 1 122222211
Q ss_pred ---------H----hCC---CEEEeccccCCCCCCCCc-CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhh
Q 016441 77 ---------K----KLG---TCILHGVDATTMELHPDL-RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNS 139 (389)
Q Consensus 77 ---------r----~~G---v~VlfgVDATkL~~~~~L-k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA 139 (389)
+ ..| ...+..-|+.+......+ ...+||.|+.|.|.......+. ....+....|++.+
T Consensus 126 ~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~-----~~~~~~~~~~l~~~ 200 (250)
T 1o9g_A 126 EAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEG-----QVPGQPVAGLLRSL 200 (250)
T ss_dssp HHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSS-----CCCHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccc-----cccccHHHHHHHHH
Confidence 0 111 011334455442100000 2347999999998775421110 01235677899999
Q ss_pred HhcccCCCeEEEE
Q 016441 140 SGMLRDGGEVHVS 152 (389)
Q Consensus 140 ~~lL~~~GeIHVT 152 (389)
..+|+++|.+.++
T Consensus 201 ~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 201 ASALPAHAVIAVT 213 (250)
T ss_dssp HHHSCTTCEEEEE
T ss_pred HHhcCCCcEEEEe
Confidence 9999999999984
No 191
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=92.66 E-value=0.43 Score=40.04 Aligned_cols=112 Identities=12% Similarity=0.119 Sum_probs=66.1
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
..++++||.||.|. ...|..+++.+. |+++.. ..+.+ ...|++++... .+..
T Consensus 10 ~~~g~~vL~~~~g~-------------------v~vD~s~~ml~~---a~~~~~----~~~~~-~~~d~~~~~~~-~~~~ 61 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS-------------------SPVEALKGLVDK---LQALTG----NEGRV-SVENIKQLLQS-AHKE 61 (176)
T ss_dssp CCTTSEEEEEECTT-------------------SCHHHHHHHHHH---HHHHTT----TTSEE-EEEEGGGGGGG-CCCS
T ss_pred CCCCCEEEEecCCc-------------------eeeeCCHHHHHH---HHHhcc----cCcEE-EEechhcCccc-cCCC
Confidence 45689999999985 125543333332 322221 12444 34577776421 1245
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC----CCCcc---cHHHHHhhCCc
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV----PFSNW---NIKELAIGSSL 173 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~----PY~sW---nIe~LAa~aGL 173 (389)
..||.|+.++--.-. .++ ...+|+.+..+|+|||.+.+...... ++..+ .+.++.+++||
T Consensus 62 ~~fD~V~~~~~l~~~--~~~-----------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 62 SSFDIILSGLVPGST--TLH-----------SAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp SCEEEEEECCSTTCC--CCC-----------CHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred CCEeEEEECChhhhc--ccC-----------HHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 789999987532211 022 14788999999999999999654221 22222 35567788999
No 192
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=92.66 E-value=0.23 Score=43.57 Aligned_cols=116 Identities=16% Similarity=0.185 Sum_probs=78.9
Q ss_pred cCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCC-
Q 016441 19 KHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPD- 97 (389)
Q Consensus 19 ~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~- 97 (389)
....++.+||=+|=|.=.+|..|++. +..|+|.-+.... + ..++.++ ..|+++......
T Consensus 21 ~~~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~------~----------~~~v~~~-~~D~~~~~~~~~~ 80 (191)
T 3dou_A 21 RVVRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME------E----------IAGVRFI-RCDIFKETIFDDI 80 (191)
T ss_dssp CCSCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC------C----------CTTCEEE-ECCTTSSSHHHHH
T ss_pred CCCCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc------c----------CCCeEEE-EccccCHHHHHHH
Confidence 34567899999999999999999886 4578887776431 0 1356554 457776432111
Q ss_pred ---cC---CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC
Q 016441 98 ---LR---TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV 157 (389)
Q Consensus 98 ---Lk---~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 157 (389)
+. ..+||.|+-|-|-... |... ........|+...+..|..+|+|||.+.+.+..++
T Consensus 81 ~~~~~~~~~~~~D~Vlsd~~~~~~-g~~~--~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~ 143 (191)
T 3dou_A 81 DRALREEGIEKVDDVVSDAMAKVS-GIPS--RDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGD 143 (191)
T ss_dssp HHHHHHHTCSSEEEEEECCCCCCC-SCHH--HHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred HHHhhcccCCcceEEecCCCcCCC-CCcc--cCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCC
Confidence 11 1389999999754332 3221 11223456778889999999999999999998886
No 193
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=92.63 E-value=0.48 Score=41.99 Aligned_cols=105 Identities=15% Similarity=0.106 Sum_probs=66.3
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
..+..+||-||=|.=.++..|++..+ ..+++.-.+ +++.+ .+++|++.+.-.++.+ ...|+. .. . ...
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~--~~~~~---~a~~~~~~~~~~~v~~-~~~d~~-~~-~--~~~ 156 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERI--PELVE---FAKRNLERAGVKNVHV-ILGDGS-KG-F--PPK 156 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESC--HHHHH---HHHHHHHHTTCCSEEE-EESCGG-GC-C--GGG
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCC--HHHHH---HHHHHHHHcCCCCcEE-EECCcc-cC-C--CCC
Confidence 35677999999999999999999875 567665444 23332 2555655433223333 334551 11 1 123
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV 157 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 157 (389)
..||.||.+.+-... ...+..+|+++|.+.++.-+..
T Consensus 157 ~~fD~Ii~~~~~~~~--------------------~~~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 157 APYDVIIVTAGAPKI--------------------PEPLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp CCEEEEEECSBBSSC--------------------CHHHHHTEEEEEEEEEEECSSS
T ss_pred CCccEEEECCcHHHH--------------------HHHHHHhcCCCcEEEEEEecCC
Confidence 469999998764332 0146778999999999987653
No 194
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=92.56 E-value=0.29 Score=44.29 Aligned_cols=103 Identities=14% Similarity=0.136 Sum_probs=68.1
Q ss_pred CCCeEEEEecCChhHHHHHHHH---hCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcC
Q 016441 23 SNHQILLVGEGDFSFSLCLALA---FGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~---~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk 99 (389)
+..+||=||=|.=..+..||+. .+.+..|+|.-.+..- .+ .|+ .+ ..+++++.+ |+.++..-..+.
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~--l~---~a~----~~-~~~v~~~~g-D~~~~~~l~~~~ 149 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSR--CQ---IPA----SD-MENITLHQG-DCSDLTTFEHLR 149 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTT--CC---CCG----GG-CTTEEEEEC-CSSCSGGGGGGS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHH--HH---HHh----cc-CCceEEEEC-cchhHHHHHhhc
Confidence 4579999999999999999987 3445678777665431 11 111 11 235677666 887742111223
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHh-cccCCCeEEEEe
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSG-MLRDGGEVHVSH 153 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~-lL~~~GeIHVTL 153 (389)
...||.|+.+..|. + +..+|..+.. +|++||.+.+.-
T Consensus 150 ~~~fD~I~~d~~~~------~-----------~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 150 EMAHPLIFIDNAHA------N-----------TFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp SSCSSEEEEESSCS------S-----------HHHHHHHHHHHTCCTTCEEEECS
T ss_pred cCCCCEEEECCchH------h-----------HHHHHHHHHHhhCCCCCEEEEEe
Confidence 34799999988762 1 2357888885 999999999853
No 195
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=92.55 E-value=0.93 Score=39.57 Aligned_cols=135 Identities=9% Similarity=0.057 Sum_probs=78.0
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH------------HhCCCEEEecccc
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNL------------KKLGTCILHGVDA 89 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~L------------r~~Gv~VlfgVDA 89 (389)
.+..+||-||=|.=-++..||+. | ..|+| .|-.+++.+. |.++.... ...+++++ .-|+
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~-g--~~V~g--vD~S~~~l~~---a~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~d~ 91 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ-G--YHVVG--AELSEAAVER---YFTERGEQPHITSQGDFKVYAAPGIEIW-CGDF 91 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH-C--CEEEE--EEECHHHHHH---HHHHHCSCSEEEEETTEEEEECSSSEEE-EECC
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC-C--CeEEE--EeCCHHHHHH---HHHHccCCcccccccccccccCCccEEE-ECcc
Confidence 46789999999999999999986 3 35554 5522333332 33222100 01234444 3477
Q ss_pred CCCCCCCCcCC-CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCe-EEEEecC------CCCCCc
Q 016441 90 TTMELHPDLRT-RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGE-VHVSHKT------TVPFSN 161 (389)
Q Consensus 90 TkL~~~~~Lk~-~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~Ge-IHVTLk~------g~PY~s 161 (389)
.++.. .. ..||.|+.++-..-. +......+++.+..+|+|||. +.+++.- +.|+.
T Consensus 92 ~~l~~----~~~~~fD~v~~~~~l~~l------------~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~- 154 (203)
T 1pjz_A 92 FALTA----RDIGHCAAFYDRAAMIAL------------PADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFS- 154 (203)
T ss_dssp SSSTH----HHHHSEEEEEEESCGGGS------------CHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCC-
T ss_pred ccCCc----ccCCCEEEEEECcchhhC------------CHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCC-
Confidence 77642 22 579999975432211 122345789999999999998 4555432 33432
Q ss_pred ccHHH---HHhhCCcEEEEEeeCCC
Q 016441 162 WNIKE---LAIGSSLSLIWCSEFKI 183 (389)
Q Consensus 162 WnIe~---LAa~aGL~L~~~~~F~~ 183 (389)
+..++ +.+. |+.+......+.
T Consensus 155 ~~~~el~~~~~~-gf~i~~~~~~~~ 178 (203)
T 1pjz_A 155 VPQTWLHRVMSG-NWEVTKVGGQDT 178 (203)
T ss_dssp CCHHHHHHTSCS-SEEEEEEEESSC
T ss_pred CCHHHHHHHhcC-CcEEEEeccccc
Confidence 33344 3334 888776655543
No 196
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=92.54 E-value=0.57 Score=40.50 Aligned_cols=110 Identities=12% Similarity=0.092 Sum_probs=67.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH-----HhCCCEEEeccccCCCCCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNL-----KKLGTCILHGVDATTMELHP 96 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~L-----r~~Gv~VlfgVDATkL~~~~ 96 (389)
.+..+||=||=|.=.++..|++..+ ..++++.-.+ +++.+ .+++++... ...++.++. -|+..+.
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s--~~~~~---~a~~~~~~~~~~~~~~~~v~~~~-~d~~~~~--- 97 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVS--YSVLE---RAKDRLKIDRLPEMQRKRISLFQ-SSLVYRD--- 97 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESC--HHHHH---HHHHHHTGGGSCHHHHTTEEEEE-CCSSSCC---
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECC--HHHHH---HHHHHHHhhccccccCcceEEEe-Ccccccc---
Confidence 3567999999999999999998642 3466665544 33322 133443221 111444443 3664432
Q ss_pred CcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEec
Q 016441 97 DLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHK 154 (389)
Q Consensus 97 ~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk 154 (389)
.....||.|+.+..---. ...-+..+++.+..+|+++|.+.++..
T Consensus 98 -~~~~~fD~V~~~~~l~~~------------~~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 98 -KRFSGYDAATVIEVIEHL------------DENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp -GGGTTCSEEEEESCGGGC------------CHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred -cccCCCCEEEEHHHHHhC------------CHHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 334789999987542211 112356889999999999996666654
No 197
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=92.23 E-value=0.18 Score=46.00 Aligned_cols=108 Identities=11% Similarity=0.106 Sum_probs=68.6
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCCCCCc
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMELHPDL 98 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~~~~L 98 (389)
......+||=||=|.=.++..||+.+..+..|++.-.+. +..+ .|++|++...- ..++++ .-||.+.-. .+
T Consensus 76 ~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~--~~~~---~a~~~~~~~g~~~~i~~~-~gda~~~l~--~l 147 (247)
T 1sui_A 76 KLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINK--ENYE---LGLPVIKKAGVDHKIDFR-EGPALPVLD--EM 147 (247)
T ss_dssp HHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCC--HHHH---HHHHHHHHTTCGGGEEEE-ESCHHHHHH--HH
T ss_pred HhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCH--HHHH---HHHHHHHHcCCCCCeEEE-ECCHHHHHH--HH
Confidence 345677999999999999999999875445666655553 2222 25556554211 113333 346654211 11
Q ss_pred -----CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 99 -----RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 99 -----k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
....||.|+.+.+. ++ ...||+.+..+|++||.|.+.
T Consensus 148 ~~~~~~~~~fD~V~~d~~~------~~-----------~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 148 IKDEKNHGSYDFIFVDADK------DN-----------YLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp HHSGGGTTCBSEEEECSCS------TT-----------HHHHHHHHHHHBCTTCCEEEE
T ss_pred HhccCCCCCEEEEEEcCch------HH-----------HHHHHHHHHHhCCCCeEEEEe
Confidence 13679999998542 11 347888899999999999874
No 198
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=92.23 E-value=0.063 Score=47.66 Aligned_cols=110 Identities=17% Similarity=0.189 Sum_probs=69.0
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEE-eccccCCCCCCCCcCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCIL-HGVDATTMELHPDLRT 100 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~Vl-fgVDATkL~~~~~Lk~ 100 (389)
....+||=||=|.=.++..|++.. ...+++ .|-.+++.+. |+++. +..|..|. ..-|+.++.. .+..
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~g--vD~s~~~l~~---a~~~~---~~~~~~v~~~~~d~~~~~~--~~~~ 126 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAP--IDEHWI--IECNDGVFQR---LRDWA---PRQTHKVIPLKGLWEDVAP--TLPD 126 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSC--EEEEEE--EECCHHHHHH---HHHHG---GGCSSEEEEEESCHHHHGG--GSCT
T ss_pred CCCCeEEEEeccCCHHHHHHHhcC--CCeEEE--EcCCHHHHHH---HHHHH---HhcCCCeEEEecCHHHhhc--ccCC
Confidence 456799999999999999997632 235655 5543444432 44433 33444332 3456666421 2345
Q ss_pred CCcceEEE-cCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 101 RKFDRIIF-NFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 101 ~~FDrIIF-NFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
..||.|+. .|+..- .+ .+......+++.+..+|+|+|.+.+.-
T Consensus 127 ~~fD~V~~d~~~~~~----~~------~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 127 GHFDGILYDTYPLSE----ET------WHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp TCEEEEEECCCCCBG----GG------TTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred CceEEEEECCcccch----hh------hhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 78999999 665411 11 234455678999999999999988653
No 199
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=92.10 E-value=0.72 Score=39.49 Aligned_cols=118 Identities=18% Similarity=0.184 Sum_probs=69.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||=+|=|.=.|+..|++. + ...+++.-.+ +++.+ .++.|+. ++.++. -|+.++. .
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~-~~~v~~vD~~--~~~~~---~a~~~~~-----~~~~~~-~d~~~~~-------~ 109 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-G-AESVTAFDID--PDAIE---TAKRNCG-----GVNFMV-ADVSEIS-------G 109 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-T-BSEEEEEESC--HHHHH---HHHHHCT-----TSEEEE-CCGGGCC-------C
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-C-CCEEEEEECC--HHHHH---HHHHhcC-----CCEEEE-CcHHHCC-------C
Confidence 35679999999999999999876 3 3356666554 22222 2444543 565554 4777652 5
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEE
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWC 178 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~ 178 (389)
.||.|+.|-|..-... .....|++.+..++ |.|.+.... .....+.+++++.| .+...
T Consensus 110 ~~D~v~~~~p~~~~~~------------~~~~~~l~~~~~~~---g~~~~~~~~---~~~~~~~~~~~~~g-~~~~~ 167 (200)
T 1ne2_A 110 KYDTWIMNPPFGSVVK------------HSDRAFIDKAFETS---MWIYSIGNA---KARDFLRREFSARG-DVFRE 167 (200)
T ss_dssp CEEEEEECCCC-------------------CHHHHHHHHHHE---EEEEEEEEG---GGHHHHHHHHHHHE-EEEEE
T ss_pred CeeEEEECCCchhccC------------chhHHHHHHHHHhc---CcEEEEEcC---chHHHHHHHHHHCC-CEEEE
Confidence 7999999988432200 01135667777777 556666532 22233556666776 54443
No 200
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=91.95 E-value=0.27 Score=44.09 Aligned_cols=98 Identities=13% Similarity=0.134 Sum_probs=64.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+..+||-||=|.=.++..|++.++ +..+++.-.+ +...+. +..+. ..+.+ ...|+..+. +...
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s--~~~~~~---a~~~~-----~~~~~-~~~d~~~~~----~~~~ 147 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVS--KVAIKA---AAKRY-----PQVTF-CVASSHRLP----FSDT 147 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESC--HHHHHH---HHHHC-----TTSEE-EECCTTSCS----BCTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCC--HHHHHH---HHHhC-----CCcEE-EEcchhhCC----CCCC
Confidence 4678999999999999999998763 3467665443 222221 22221 22433 344776653 3456
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT 156 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 156 (389)
.||.|+.++.. .+++.+..+|+++|.+.+.....
T Consensus 148 ~fD~v~~~~~~---------------------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 148 SMDAIIRIYAP---------------------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp CEEEEEEESCC---------------------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred ceeEEEEeCCh---------------------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 89999987651 24678889999999998876543
No 201
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=91.94 E-value=0.6 Score=43.65 Aligned_cols=117 Identities=16% Similarity=0.129 Sum_probs=73.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeccccCCCCCCCCcCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG-TCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G-v~VlfgVDATkL~~~~~Lk~~ 101 (389)
...+||=+|=|.=.++.+|++. ...+++|+-.+ .+.+ + -|+.|++.+.-.+ +.+ +.-|+.+. +. .
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis-~~al-~---~A~~n~~~~~l~~~v~~-~~~D~~~~-----~~-~ 188 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVS-SKAV-E---IARKNAERHGVSDRFFV-RKGEFLEP-----FK-E 188 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESC-HHHH-H---HHHHHHHHTTCTTSEEE-EESSTTGG-----GG-G
T ss_pred CCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECC-HHHH-H---HHHHHHHHcCCCCceEE-EECcchhh-----cc-c
Confidence 5578999999999999999987 35577776554 3333 2 3667776553222 333 34466552 11 3
Q ss_pred Cc---ceEEEcCCCCCCCCCccchHHHH--HhHHHH-----HHHHHhhH-hcccCCCeEEEEecC
Q 016441 102 KF---DRIIFNFPHAGFYGKEDNHLLIE--MHRSLV-----RDFFRNSS-GMLRDGGEVHVSHKT 155 (389)
Q Consensus 102 ~F---DrIIFNFPH~G~~gkED~~r~Ir--~nr~LL-----~~FF~SA~-~lL~~~GeIHVTLk~ 155 (389)
+| |.||.|-|-.+... .....++ -+..|. ..|++.+. ..|+++|.+.+.+-.
T Consensus 189 ~f~~~D~IvsnPPyi~~~~--~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 189 KFASIEMILSNPPYVKSSA--HLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp GTTTCCEEEECCCCBCGGG--SCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred ccCCCCEEEEcCCCCCccc--ccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 68 99999999887411 0001111 112221 26888888 999999999987644
No 202
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=91.81 E-value=0.21 Score=44.69 Aligned_cols=108 Identities=18% Similarity=0.172 Sum_probs=66.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeccccCCCCCCCCcCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL-GTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~-Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
.+..+||=||=|.=.++..|++.++.+..|++.-.+ ++..+ .|++|++...-. .+.++ .-|+...-.......
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~--~~~~~---~a~~~~~~~g~~~~i~~~-~~d~~~~l~~l~~~~ 144 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQD--PNATA---IAKKYWQKAGVAEKISLR-LGPALATLEQLTQGK 144 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESC--HHHHH---HHHHHHHHHTCGGGEEEE-ESCHHHHHHHHHTSS
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHcCCCCcEEEE-EcCHHHHHHHHHhcC
Confidence 456799999999999999999887534456655443 33332 255565543211 13333 335433110000112
Q ss_pred --CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 101 --RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 101 --~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
..||.|+.+.+. ++ ...+|..+..+|+++|.|.+.
T Consensus 145 ~~~~fD~V~~d~~~------~~-----------~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 145 PLPEFDLIFIDADK------RN-----------YPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp SCCCEEEEEECSCG------GG-----------HHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCCcCEEEECCCH------HH-----------HHHHHHHHHHHcCCCeEEEEe
Confidence 679999988651 11 346889999999999999884
No 203
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=91.61 E-value=0.92 Score=43.94 Aligned_cols=136 Identities=19% Similarity=0.100 Sum_probs=84.4
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC---EEEeccccCCCCCCCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGT---CILHGVDATTMELHPD 97 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv---~VlfgVDATkL~~~~~ 97 (389)
...+.+||=+|=|.=.++..+|... ....|++.-.+. + +.+ .|+.|++. .|+ .-+..-|+.++..
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~-~-~l~---~A~~n~~~---~gl~~~i~~~~~D~~~~~~--- 282 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYR-K-HLI---GAEMNALA---AGVLDKIKFIQGDATQLSQ--- 282 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCH-H-HHH---HHHHHHHH---TTCGGGCEEEECCGGGGGG---
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCH-H-HHH---HHHHHHHH---cCCCCceEEEECChhhCCc---
Confidence 4567789988888878888888753 223677766553 2 222 36666654 342 2334558887642
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEE
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIW 177 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~ 177 (389)
....||.||.|.|---..+... ....|...|++.+..+| +|.+.+... +.-.++++..+.|+...+
T Consensus 283 -~~~~fD~Ii~npPyg~r~~~~~------~~~~ly~~~~~~l~r~l--~g~~~~i~~-----~~~~~~~~~~~~G~~~~~ 348 (373)
T 3tm4_A 283 -YVDSVDFAISNLPYGLKIGKKS------MIPDLYMKFFNELAKVL--EKRGVFITT-----EKKAIEEAIAENGFEIIH 348 (373)
T ss_dssp -TCSCEEEEEEECCCC------C------CHHHHHHHHHHHHHHHE--EEEEEEEES-----CHHHHHHHHHHTTEEEEE
T ss_pred -ccCCcCEEEECCCCCcccCcch------hHHHHHHHHHHHHHHHc--CCeEEEEEC-----CHHHHHHHHHHcCCEEEE
Confidence 2367999999999643222111 23456788999999988 454444433 223566777889999988
Q ss_pred EeeCC
Q 016441 178 CSEFK 182 (389)
Q Consensus 178 ~~~F~ 182 (389)
+.++.
T Consensus 349 ~~~~~ 353 (373)
T 3tm4_A 349 HRVIG 353 (373)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76653
No 204
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=91.60 E-value=0.071 Score=48.56 Aligned_cols=108 Identities=13% Similarity=0.150 Sum_probs=70.2
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeccccCCCCCCCCc
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL-GTCILHGVDATTMELHPDL 98 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~-Gv~VlfgVDATkL~~~~~L 98 (389)
...+..+||=||=|.=..++.||+.++.+..|++.-.+.. . ...|++|++...-. .++++ .-||..+-. .+
T Consensus 57 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~--~---~~~a~~~~~~~g~~~~i~~~-~gda~~~l~--~~ 128 (242)
T 3r3h_A 57 RLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEG--W---TKHAHPYWREAKQEHKIKLR-LGPALDTLH--SL 128 (242)
T ss_dssp HHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCS--S---CCCSHHHHHHTTCTTTEEEE-ESCHHHHHH--HH
T ss_pred hhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHH--H---HHHHHHHHHHcCCCCcEEEE-EcCHHHHHH--HH
Confidence 3456789999999999999999998754557777666532 1 12355666543322 23333 346654311 11
Q ss_pred ----CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 99 ----RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 99 ----k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
....||.|+.+.++. + ...||+.+..+|++||.|.+.
T Consensus 129 ~~~~~~~~fD~V~~d~~~~------~-----------~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 129 LNEGGEHQFDFIFIDADKT------N-----------YLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp HHHHCSSCEEEEEEESCGG------G-----------HHHHHHHHHHHEEEEEEEEEE
T ss_pred hhccCCCCEeEEEEcCChH------H-----------hHHHHHHHHHhcCCCeEEEEE
Confidence 036799999986521 1 235888999999999999883
No 205
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=91.44 E-value=1.3 Score=40.76 Aligned_cols=133 Identities=14% Similarity=0.029 Sum_probs=76.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHH---------HH--------HhCCCEEEe
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLD---------NL--------KKLGTCILH 85 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~---------~L--------r~~Gv~Vlf 85 (389)
+..+||-||=|+=-++..||+. | ..|| ..|-.+++.+. |..... .. ...++++ .
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~-G--~~V~--gvD~S~~~i~~---a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~ 138 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR-G--HTVV--GVEISEIGIRE---FFAEQNLSYTEEPLAEIAGAKVFKSSSGSISL-Y 138 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT-T--CEEE--EECSCHHHHHH---HHHHTTCCEEEEECTTSTTCEEEEETTSSEEE-E
T ss_pred CCCeEEEeCCCCcHHHHHHHHC-C--CeEE--EEECCHHHHHH---HHHhcccccccccccccccccccccCCCceEE-E
Confidence 6779999999999999999975 3 4555 45633333332 221111 00 0122333 3
Q ss_pred ccccCCCCCCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEE-EEec------CCCC
Q 016441 86 GVDATTMELHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVH-VSHK------TTVP 158 (389)
Q Consensus 86 gVDATkL~~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIH-VTLk------~g~P 158 (389)
.-|+.++... ....||.|+.+.-.... +......+++.+..+|+|||.+. +|+. .+.|
T Consensus 139 ~~D~~~l~~~---~~~~FD~V~~~~~l~~l------------~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~ 203 (252)
T 2gb4_A 139 CCSIFDLPRA---NIGKFDRIWDRGALVAI------------NPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPP 203 (252)
T ss_dssp ESCTTTGGGG---CCCCEEEEEESSSTTTS------------CGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSS
T ss_pred ECccccCCcc---cCCCEEEEEEhhhhhhC------------CHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCC
Confidence 4477776421 12689999976543322 11123578999999999999985 6665 2334
Q ss_pred CCcccHHHH---HhhCCcEEEEEeeC
Q 016441 159 FSNWNIKEL---AIGSSLSLIWCSEF 181 (389)
Q Consensus 159 Y~sWnIe~L---Aa~aGL~L~~~~~F 181 (389)
+. +...++ ... +|.++....+
T Consensus 204 ~~-~~~~el~~~l~~-~f~v~~~~~~ 227 (252)
T 2gb4_A 204 FY-VPSAELKRLFGT-KCSMQCLEEV 227 (252)
T ss_dssp CC-CCHHHHHHHHTT-TEEEEEEEEE
T ss_pred CC-CCHHHHHHHhhC-CeEEEEEecc
Confidence 32 444443 333 4777665533
No 206
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=91.43 E-value=0.74 Score=40.49 Aligned_cols=118 Identities=8% Similarity=0.044 Sum_probs=76.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccC-CCCCCCCcC-
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDAT-TMELHPDLR- 99 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDAT-kL~~~~~Lk- 99 (389)
.+..+||=||=|.=.++..|++. +..++++-.+ ..+.+. ++.+ ..++.++ ..|+. .+. +.
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s--~~~~~~---a~~~-----~~~~~~~-~~d~~~~~~----~~~ 108 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFS--PELLKL---ARAN-----APHADVY-EWNGKGELP----AGL 108 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESC--HHHHHH---HHHH-----CTTSEEE-ECCSCSSCC----TTC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECC--HHHHHH---HHHh-----CCCceEE-EcchhhccC----CcC
Confidence 46789999999999999999987 3467766443 222221 3333 2244444 34553 322 33
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEEe
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWCS 179 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~ 179 (389)
...||.|+.+.. ...+++.+..+|+|+|.+... +...+.-.+.++.+++|+......
T Consensus 109 ~~~fD~v~~~~~--------------------~~~~l~~~~~~LkpgG~l~~~---~~~~~~~~~~~~l~~~Gf~~~~~~ 165 (226)
T 3m33_A 109 GAPFGLIVSRRG--------------------PTSVILRLPELAAPDAHFLYV---GPRLNVPEVPERLAAVGWDIVAED 165 (226)
T ss_dssp CCCEEEEEEESC--------------------CSGGGGGHHHHEEEEEEEEEE---ESSSCCTHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEEeCCC--------------------HHHHHHHHHHHcCCCcEEEEe---CCcCCHHHHHHHHHHCCCeEEEEE
Confidence 578999999821 125677888999999998811 112344467888899999877654
Q ss_pred e
Q 016441 180 E 180 (389)
Q Consensus 180 ~ 180 (389)
.
T Consensus 166 ~ 166 (226)
T 3m33_A 166 H 166 (226)
T ss_dssp E
T ss_pred e
Confidence 3
No 207
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=91.27 E-value=0.13 Score=46.45 Aligned_cols=110 Identities=13% Similarity=0.028 Sum_probs=68.4
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeccccCCCCCCCC-
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL-GTCILHGVDATTMELHPD- 97 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~-Gv~VlfgVDATkL~~~~~- 97 (389)
...+..+||=||=|.=..++.||++++....|++.-.+ ++..+ .+++|++...-. .+.++ .-||.+.-....
T Consensus 67 ~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~--~~~~~---~a~~~~~~~g~~~~i~~~-~gda~~~l~~l~~ 140 (237)
T 3c3y_A 67 KLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFD--REAYE---IGLPFIRKAGVEHKINFI-ESDAMLALDNLLQ 140 (237)
T ss_dssp HHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESC--HHHHH---HHHHHHHHTTCGGGEEEE-ESCHHHHHHHHHH
T ss_pred HhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHcCCCCcEEEE-EcCHHHHHHHHHh
Confidence 34567899999999999999999987545566665544 33322 355565542111 13333 346654211000
Q ss_pred --cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 98 --LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 98 --Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
.....||.|+.+.++ + ....||+.+..+|++||.|.+.
T Consensus 141 ~~~~~~~fD~I~~d~~~------~-----------~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 141 GQESEGSYDFGFVDADK------P-----------NYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp STTCTTCEEEEEECSCG------G-----------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCCCCcCEEEECCch------H-----------HHHHHHHHHHHhcCCCeEEEEe
Confidence 013679999987432 1 1357899999999999999875
No 208
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=91.03 E-value=0.52 Score=43.25 Aligned_cols=116 Identities=15% Similarity=0.116 Sum_probs=65.5
Q ss_pred CCCeEEEEecCChhHHHHHHHHh---CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEE-eccccCCCCCC--
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF---GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL-GTCIL-HGVDATTMELH-- 95 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~---gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~-Gv~Vl-fgVDATkL~~~-- 95 (389)
+..+||=||=|.=.++..+++.+ .....+..|..|..+++.+. +++.+...... ++.+. ...|+..+...
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~---a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAK---YKELVAKTSNLENVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHH---HHHHHHTCSSCTTEEEEEECSCHHHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHH---HHHHHHhccCCCcceEEEEecchhhhhhhhc
Confidence 45689999988777776554332 12334445778865666554 33333211111 22332 23344333210
Q ss_pred CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC
Q 016441 96 PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT 155 (389)
Q Consensus 96 ~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 155 (389)
..+....||.|+.++=---. +| +..+++.+..+|+|||.+.|....
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~---~d-----------~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYV---KD-----------IPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGC---SC-----------HHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cccCCCceeEEEEeeeeeec---CC-----------HHHHHHHHHHHcCCCcEEEEEEec
Confidence 01234789999987532221 22 346888899999999999998644
No 209
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=90.99 E-value=3 Score=41.25 Aligned_cols=136 Identities=14% Similarity=0.134 Sum_probs=79.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
..+.+||=+|=|.=.|++.||+. ...++|.-.+ ++..+ .|+.|++...-.++.+ ..-|+.+.-....+...
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s--~~al~---~A~~n~~~~~~~~v~f-~~~d~~~~l~~~~~~~~ 355 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGV--PALVE---KGQQNARLNGLQNVTF-YHENLEEDVTKQPWAKN 355 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESC--HHHHH---HHHHHHHHTTCCSEEE-EECCTTSCCSSSGGGTT
T ss_pred CCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCC--HHHHH---HHHHHHHHcCCCceEE-EECCHHHHhhhhhhhcC
Confidence 45678999998888888899876 3467666544 23332 3666765432123333 34577663222223446
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEEeeC
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWCSEF 181 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~~F 181 (389)
.||.|+.|-|-.|. ++ .-+.|.. +++++-|+|+- + |-....-...-.+.|+.+....+|
T Consensus 356 ~fD~Vv~dPPr~g~---~~------~~~~l~~---------~~p~~ivyvsc-~--p~tlard~~~l~~~Gy~~~~~~~~ 414 (433)
T 1uwv_A 356 GFDKVLLDPARAGA---AG------VMQQIIK---------LEPIRIVYVSC-N--PATLARDSEALLKAGYTIARLAML 414 (433)
T ss_dssp CCSEEEECCCTTCC---HH------HHHHHHH---------HCCSEEEEEES-C--HHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCEEEECCCCccH---HH------HHHHHHh---------cCCCeEEEEEC-C--hHHHHhhHHHHHHCCcEEEEEEEe
Confidence 79999999999984 11 1122221 56766666653 2 211111112234579999998888
Q ss_pred CCCCCCCC
Q 016441 182 KIEDYPAY 189 (389)
Q Consensus 182 ~~~~YPGY 189 (389)
| .||.=
T Consensus 415 d--~Fp~t 420 (433)
T 1uwv_A 415 D--MFPHT 420 (433)
T ss_dssp C--CSTTS
T ss_pred c--cCCCC
Confidence 7 57743
No 210
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=90.86 E-value=0.78 Score=43.82 Aligned_cols=127 Identities=17% Similarity=0.151 Sum_probs=80.3
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
+....+||=||=|.=.++..|++.+. ++.++.+|- ..+.+. +.. + .+++++. -|+.+ . +.
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~---~~~~~~~D~-~~~~~~---a~~----~--~~v~~~~-~d~~~-~----~~- 266 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYP---LIKGINFDL-PQVIEN---APP----L--SGIEHVG-GDMFA-S----VP- 266 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCT---TCEEEEEEC-HHHHTT---CCC----C--TTEEEEE-CCTTT-C----CC-
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCC---CCeEEEeCh-HHHHHh---hhh----c--CCCEEEe-CCccc-C----CC-
Confidence 45678999999999999999999863 456777887 444432 211 1 2444443 36654 1 22
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe---cCC---------------------
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH---KTT--------------------- 156 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL---k~g--------------------- 156 (389)
. ||.|+.++----. .| .-...+++.+..+|+|+|.+.|.- .+.
T Consensus 267 ~-~D~v~~~~~lh~~---~d---------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~ 333 (372)
T 1fp1_D 267 Q-GDAMILKAVCHNW---SD---------EKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITV 333 (372)
T ss_dssp C-EEEEEEESSGGGS---CH---------HHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHH
T ss_pred C-CCEEEEecccccC---CH---------HHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhcc
Confidence 2 9999998653211 11 113478899999999999988872 111
Q ss_pred --CCCCcccHHHHHhhCCcEEEEEee
Q 016441 157 --VPFSNWNIKELAIGSSLSLIWCSE 180 (389)
Q Consensus 157 --~PY~sWnIe~LAa~aGL~L~~~~~ 180 (389)
..++.=+++++.+++||..++..+
T Consensus 334 ~~~~~t~~e~~~ll~~aGf~~~~~~~ 359 (372)
T 1fp1_D 334 GGRERTEKQYEKLSKLSGFSKFQVAC 359 (372)
T ss_dssp SCCCEEHHHHHHHHHHTTCSEEEEEE
T ss_pred CCccCCHHHHHHHHHHCCCceEEEEE
Confidence 111122345677788888887665
No 211
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=90.55 E-value=3.2 Score=37.67 Aligned_cols=147 Identities=14% Similarity=0.133 Sum_probs=82.4
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHH---Hhhh---------hHHHHHHHHHhCC----------
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVI---QKYK---------RAKSNLDNLKKLG---------- 80 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~---~KY~---------~A~~Ni~~Lr~~G---------- 80 (389)
+..+||=||=|.=.++..++... +..|+++-+. .+.+. ++.. ....|+..++...
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~--~~~v~gvD~s-~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 147 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSH--FEDITMTDFL-EVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQL 147 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGG--CSEEEEECSC-HHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccC--CCeEEEeCCC-HHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHH
Confidence 56789999887765444333322 3477776553 33332 1111 0113444443211
Q ss_pred ---CEEEeccccCC-CCCC-CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC
Q 016441 81 ---TCILHGVDATT-MELH-PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT 155 (389)
Q Consensus 81 ---v~VlfgVDATk-L~~~-~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 155 (389)
+.-+...|+++ +... ..+....||.|+.++-.-- +...-.=...+|+.+..+|+|||.+.++-..
T Consensus 148 ~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~----------~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~ 217 (289)
T 2g72_A 148 RARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEA----------VSPDLASFQRALDHITTLLRPGGHLLLIGAL 217 (289)
T ss_dssp HHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHH----------HCSSHHHHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred HhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhh----------hcCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 12234458776 3211 1233467999999973111 0000122467889999999999999886321
Q ss_pred C-------------CCCCcccHHHHHhhCCcEEEEEeeCC
Q 016441 156 T-------------VPFSNWNIKELAIGSSLSLIWCSEFK 182 (389)
Q Consensus 156 g-------------~PY~sWnIe~LAa~aGL~L~~~~~F~ 182 (389)
. .+++.=.+.++.+++||.++....+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 218 EESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp SCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 1 12344456778889999998877655
No 212
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=90.35 E-value=1.1 Score=42.88 Aligned_cols=128 Identities=16% Similarity=0.127 Sum_probs=80.2
Q ss_pred CCCCCCeEEEEecC------ChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCC
Q 016441 20 HYSSNHQILLVGEG------DFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTME 93 (389)
Q Consensus 20 ~Yss~~rILLVGEG------DFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~ 93 (389)
...++.+||=+|=| .=| ..+++..+....|+|.-+... + .++++...-|++++.
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v-----~~v~~~i~gD~~~~~ 119 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------V-----SDADSTLIGDCATVH 119 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------B-----CSSSEEEESCGGGCC
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------C-----CCCEEEEECccccCC
Confidence 34567899999993 244 334555553457887766543 1 256661334777754
Q ss_pred CCCCcCCCCcceEEEcCCCC--CCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhC
Q 016441 94 LHPDLRTRKFDRIIFNFPHA--GFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGS 171 (389)
Q Consensus 94 ~~~~Lk~~~FDrIIFNFPH~--G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~a 171 (389)
. ...||.|+-|.++. |... .+. .....++...++.+..+|+++|.+.+....+.. .-.+.++.++.
T Consensus 120 ~-----~~~fD~Vvsn~~~~~~g~~~-~d~----~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~--~~~l~~~l~~~ 187 (290)
T 2xyq_A 120 T-----ANKWDLIISDMYDPRTKHVT-KEN----DSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW--NADLYKLMGHF 187 (290)
T ss_dssp C-----SSCEEEEEECCCCCC---CC-SCC----CCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC--CHHHHHHHTTE
T ss_pred c-----cCcccEEEEcCCcccccccc-ccc----cchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC--HHHHHHHHHHc
Confidence 2 15799999996432 3211 111 112346678899999999999999997766532 23677777778
Q ss_pred CcEEEEEe
Q 016441 172 SLSLIWCS 179 (389)
Q Consensus 172 GL~L~~~~ 179 (389)
|+.-++..
T Consensus 188 GF~~v~~~ 195 (290)
T 2xyq_A 188 SWWTAFVT 195 (290)
T ss_dssp EEEEEEEE
T ss_pred CCcEEEEE
Confidence 87655554
No 213
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=90.15 E-value=0.93 Score=42.60 Aligned_cols=109 Identities=12% Similarity=0.091 Sum_probs=67.1
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC-CCcC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH-PDLR 99 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~-~~Lk 99 (389)
-.++.+||=||=|.=.++..|++. +..|+|. |..+.+.+ .+++++.. . ...+|+.++... ....
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gv--D~S~~ml~---~Ar~~~~~---~----~v~~~~~~~~~~~~~~~ 107 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALER---GASVTVF--DFSQRMCD---DLAEALAD---R----CVTIDLLDITAEIPKEL 107 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHT---TCEEEEE--ESCHHHHH---HHHHHTSS---S----CCEEEECCTTSCCCGGG
T ss_pred CCCcCEEEEEeCcchHHHHHHHhc---CCEEEEE--ECCHHHHH---HHHHHHHh---c----cceeeeeeccccccccc
Confidence 356789999999999999999985 3467665 43333333 24444322 1 233455444320 0011
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV 157 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 157 (389)
...||.|+.|+.---. ..+-+..+++....+| |+|.+.++.+.+.
T Consensus 108 ~~~fD~Vv~~~~l~~~------------~~~~~~~~l~~l~~lL-PGG~l~lS~~~g~ 152 (261)
T 3iv6_A 108 AGHFDFVLNDRLINRF------------TTEEARRACLGMLSLV-GSGTVRASVKLGF 152 (261)
T ss_dssp TTCCSEEEEESCGGGS------------CHHHHHHHHHHHHHHH-TTSEEEEEEEBSC
T ss_pred CCCccEEEEhhhhHhC------------CHHHHHHHHHHHHHhC-cCcEEEEEeccCc
Confidence 3689999998642111 0112446677778889 9999999998764
No 214
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=90.11 E-value=0.085 Score=53.01 Aligned_cols=138 Identities=18% Similarity=0.160 Sum_probs=77.4
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCH-HHHHHhh-hhH-HHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 24 NHQILLVGEGDFSFSLCLALAFGSASNICASSLDSY-DDVIQKY-KRA-KSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSe-eeL~~KY-~~A-~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
.++||++|=||-+-++.++++ . ...|++--+|.. -++.++| |.. ....+..+...++|+.+ ||.+--+...-..
T Consensus 206 pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~-Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIE-DCIPVLKRYAKEG 282 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEES-CHHHHHHHHHHHT
T ss_pred CCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehH-HHHHHHHhhhhcc
Confidence 468999999999999999875 3 367887777743 2344555 221 11111222233455543 5443111000124
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHH-HhHHHHHHHHHhhHhcccCCCeEEEEecCCCCC---CcccHHHHHhhC
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIE-MHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPF---SNWNIKELAIGS 171 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir-~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY---~sWnIe~LAa~a 171 (389)
++||.||-+.+.....+.- .. .....-+.||+.|+..|+++|-+ |+-.+. |+ ..|.+.+.-++.
T Consensus 283 ~~yDvIIvDl~D~~~s~~p-----~g~a~~Lft~eFy~~~~~~L~p~GVl-v~Q~~s-~~~~~~~~~i~~tl~~v 350 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSP-----EEDSTWEFLRLILDLSMKVLKQDGKY-FTQGNC-VNLTEALSLYEEQLGRL 350 (381)
T ss_dssp CCEEEEEEECCSSCCCCC---------CHHHHHHHHHHHHHHTEEEEEEE-EEEEEE-TTCHHHHHHHHHHHTTS
T ss_pred CceeEEEECCCCCcccCcc-----cCcchHHHHHHHHHHHHHhcCCCCEE-EEecCC-CcchhHHHHHHHHHHHh
Confidence 6899999998764321100 11 23344689999999999999865 443322 33 235565544443
No 215
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=90.01 E-value=0.61 Score=40.64 Aligned_cols=101 Identities=13% Similarity=0.180 Sum_probs=64.6
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
..+..+||=||=|.=.++..|++.. ..+++.-.+ +++.+ .+..++.... ++.++ ..|+.+.- ...
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~--~~~~~---~a~~~~~~~~--~v~~~-~~d~~~~~----~~~ 132 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEIN--EKMYN---YASKLLSYYN--NIKLI-LGDGTLGY----EEE 132 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESC--HHHHH---HHHHHHTTCS--SEEEE-ESCGGGCC----GGG
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCC--HHHHH---HHHHHHhhcC--CeEEE-ECCccccc----ccC
Confidence 3567899999999999999998863 467766554 33332 2444443221 34443 34666511 124
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT 156 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 156 (389)
..||.|+.+.+--.. . ..+..+|+++|.+.++..+.
T Consensus 133 ~~fD~v~~~~~~~~~---~-----------------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 133 KPYDRVVVWATAPTL---L-----------------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CCEEEEEESSBBSSC---C-----------------HHHHHTEEEEEEEEEEECSS
T ss_pred CCccEEEECCcHHHH---H-----------------HHHHHHcCCCcEEEEEEcCC
Confidence 679999998754322 0 13677999999999987654
No 216
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=90.00 E-value=2.6 Score=40.24 Aligned_cols=135 Identities=13% Similarity=0.035 Sum_probs=82.2
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcC
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLR 99 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk 99 (389)
.++...+||=||=|.=.++.+|++++. ++.+|.+|..+.+. .++++++.-....++++- -|.-+ . .+
T Consensus 176 ~~~~~~~v~DvGgG~G~~~~~l~~~~p---~~~~~~~dlp~v~~----~a~~~~~~~~~~rv~~~~-gD~~~---~-~~- 242 (353)
T 4a6d_A 176 DLSVFPLMCDLGGGAGALAKECMSLYP---GCKITVFDIPEVVW----TAKQHFSFQEEEQIDFQE-GDFFK---D-PL- 242 (353)
T ss_dssp CGGGCSEEEEETCTTSHHHHHHHHHCS---SCEEEEEECHHHHH----HHHHHSCC--CCSEEEEE-SCTTT---S-CC-
T ss_pred CcccCCeEEeeCCCCCHHHHHHHHhCC---CceeEeccCHHHHH----HHHHhhhhcccCceeeec-Ccccc---C-CC-
Confidence 356677999999999999999999973 56778889755442 244444322222344432 24432 1 12
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC-----CCC----------------
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT-----TVP---------------- 158 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~-----g~P---------------- 158 (389)
..+|.|++..=--.+ .| +=....++++.+.|+|+|.|.|.=.- ..|
T Consensus 243 -~~~D~~~~~~vlh~~---~d---------~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g 309 (353)
T 4a6d_A 243 -PEADLYILARVLHDW---AD---------GKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEG 309 (353)
T ss_dssp -CCCSEEEEESSGGGS---CH---------HHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSC
T ss_pred -CCceEEEeeeecccC---CH---------HHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCC
Confidence 347888875421111 11 11335678888999999999886421 112
Q ss_pred --CCcccHHHHHhhCCcEEEEEee
Q 016441 159 --FSNWNIKELAIGSSLSLIWCSE 180 (389)
Q Consensus 159 --Y~sWnIe~LAa~aGL~L~~~~~ 180 (389)
++.=+.+++.+++||+.++..+
T Consensus 310 ~ert~~e~~~ll~~AGf~~v~v~~ 333 (353)
T 4a6d_A 310 QERTPTHYHMLLSSAGFRDFQFKK 333 (353)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEEEC
T ss_pred cCCCHHHHHHHHHHCCCceEEEEE
Confidence 2222356788999999888754
No 217
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=89.89 E-value=0.2 Score=45.45 Aligned_cols=114 Identities=22% Similarity=0.224 Sum_probs=69.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh----CCCEEEeccccCCCCCCCCc
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK----LGTCILHGVDATTMELHPDL 98 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~----~Gv~VlfgVDATkL~~~~~L 98 (389)
+..+||=||=|.=.++..|++. +.+++++-.+ .++.+ .+..++..... ..+ .+...|+..+.... +
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s--~~~l~---~a~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~-~ 126 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEE---GFSVTSVDAS--DKMLK---YALKERWNRRKEPAFDKW-VIEEANWLTLDKDV-P 126 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHHHHTTTSHHHHTC-EEEECCGGGHHHHS-C
T ss_pred CCCEEEEecCCCCHHHHHHHHC---CCeEEEEECC--HHHHH---HHHHhhhhccccccccee-eEeecChhhCcccc-c
Confidence 5679999999999999999886 2366665443 22322 13334322111 122 23345666553211 3
Q ss_pred CCCCcceEEEc---CCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC
Q 016441 99 RTRKFDRIIFN---FPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT 155 (389)
Q Consensus 99 k~~~FDrIIFN---FPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 155 (389)
....||.|+.+ +-|+.. .. ...+....+++.+..+|+|||.+.++..+
T Consensus 127 ~~~~fD~V~~~g~~l~~~~~-~~--------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 127 AGDGFDAVICLGNSFAHLPD-SK--------GDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp CTTCEEEEEECTTCGGGSCC-SS--------SSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cCCCeEEEEEcChHHhhcCc-cc--------cCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 45789999986 344431 00 01233567899999999999999998764
No 218
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=89.48 E-value=4.2 Score=40.50 Aligned_cols=127 Identities=17% Similarity=0.226 Sum_probs=76.8
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
..++.+||=+|=|.=.|++.||+. +..++|.-.+ +++.+ .|+.|++... ..+. ...-|+.++..
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s--~~ai~---~A~~n~~~ng-l~v~-~~~~d~~~~~~------ 351 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSN--EFAIE---MARRNVEINN-VDAE-FEVASDREVSV------ 351 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHHHHHT-CCEE-EEECCTTTCCC------
T ss_pred cCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECC--HHHHH---HHHHHHHHcC-CcEE-EEECChHHcCc------
Confidence 456789999999988999999875 3466665444 33332 3666765432 2233 34457776532
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEEee
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWCSE 180 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~~ 180 (389)
..||.||.|-|..|. . .. +++... .|+++|.|.|+.. |.. -..+++.-. +.+.+..+
T Consensus 352 ~~fD~Vv~dPPr~g~---~---------~~----~~~~l~-~l~p~givyvsc~---p~t--larDl~~l~-y~l~~~~~ 408 (425)
T 2jjq_A 352 KGFDTVIVDPPRAGL---H---------PR----LVKRLN-REKPGVIVYVSCN---PET--FARDVKMLD-YRIDEIVA 408 (425)
T ss_dssp TTCSEEEECCCTTCS---C---------HH----HHHHHH-HHCCSEEEEEESC---HHH--HHHHHHHSS-CCEEEEEE
T ss_pred cCCCEEEEcCCccch---H---------HH----HHHHHH-hcCCCcEEEEECC---hHH--HHhHHhhCe-EEEEEEEE
Confidence 179999999998764 1 11 122121 2789998888742 211 112222222 88888888
Q ss_pred CCCCCCCC
Q 016441 181 FKIEDYPA 188 (389)
Q Consensus 181 F~~~~YPG 188 (389)
|| .||.
T Consensus 409 ~D--mFP~ 414 (425)
T 2jjq_A 409 LD--MFPH 414 (425)
T ss_dssp EC--CSTT
T ss_pred EC--cCCC
Confidence 87 5774
No 219
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=89.44 E-value=0.74 Score=40.49 Aligned_cols=113 Identities=9% Similarity=0.016 Sum_probs=69.0
Q ss_pred ccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCC
Q 016441 18 IKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPD 97 (389)
Q Consensus 18 ~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~ 97 (389)
+.+..+..+||=||=|.=.++..|++... ++++.-.+ ..+.+. ++.+. ...++.+ ...|+.++.....
T Consensus 51 ~~~~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s--~~~~~~---a~~~~---~~~~~~~-~~~d~~~~~~~~~ 118 (245)
T 3ggd_A 51 ELLFNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVS--KSALEI---AAKEN---TAANISY-RLLDGLVPEQAAQ 118 (245)
T ss_dssp TTTSCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESC--HHHHHH---HHHHS---CCTTEEE-EECCTTCHHHHHH
T ss_pred hhccCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECC--HHHHHH---HHHhC---cccCceE-EECcccccccccc
Confidence 33456778999999999999999998742 67766443 333321 33332 1223443 3457766532211
Q ss_pred cC-CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEec
Q 016441 98 LR-TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHK 154 (389)
Q Consensus 98 Lk-~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk 154 (389)
+. ...||.|+.+.-..-. ..++ ...+++.+..+|+++|.+.|.-.
T Consensus 119 ~~~~~~~d~v~~~~~~~~~-~~~~-----------~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 119 IHSEIGDANIYMRTGFHHI-PVEK-----------RELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp HHHHHCSCEEEEESSSTTS-CGGG-----------HHHHHHHHHHHHTTTCEEEEEEE
T ss_pred cccccCccEEEEcchhhcC-CHHH-----------HHHHHHHHHHHcCCCCEEEEEeC
Confidence 11 1348999998654432 1111 35788899999999999776654
No 220
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=89.08 E-value=0.24 Score=49.40 Aligned_cols=119 Identities=16% Similarity=0.163 Sum_probs=69.2
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH-----h---CCCEEEeccccCCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLK-----K---LGTCILHGVDATTMEL 94 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr-----~---~Gv~VlfgVDATkL~~ 94 (389)
...+||.+|=|+-.+++.++++ + +..|++--.| +++.+ -|++|+..+. . ..++|+.+ ||.+.-.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~-~-~~~Vt~VEID--~~vie---~Ar~~~~~l~~~~l~dp~~~rv~vi~~-Da~~~L~ 259 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEID--QMVID---GCKKYMRKTCGDVLDNLKGDCYQVLIE-DCIPVLK 259 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESC--HHHHH---HHHHHCCC----CCSSSEETTEEEEES-CHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHC-C-CCEEEEEECC--HHHHH---HHHHHHHHhccccccccCCCcEEEEEC-cHHHHHH
Confidence 4578999999999999999876 3 3567665555 33332 2455554332 1 14666655 7766321
Q ss_pred CCCcCCCCcceEEEcCCC--CCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC
Q 016441 95 HPDLRTRKFDRIIFNFPH--AGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT 155 (389)
Q Consensus 95 ~~~Lk~~~FDrIIFNFPH--~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 155 (389)
...-...+||.||-+-|. .|. +.. .. .-++.....++.|..+|+++|.+.+-.+.
T Consensus 260 ~~~~~~~~fDvII~D~~d~P~~~-~p~----~L-~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 260 RYAKEGREFDYVINDLTAVPIST-SPE----ED-STWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp HHHHHTCCEEEEEEECCSSCCCC-C---------CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred hhhccCCCceEEEECCCCcccCc-Cch----hh-hHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 100024689999999986 231 110 00 12333333333448999999988776543
No 221
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=87.56 E-value=0.4 Score=43.12 Aligned_cols=109 Identities=16% Similarity=0.105 Sum_probs=68.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEE-eccccCCCCCCCCcCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCIL-HGVDATTMELHPDLRT 100 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~Vl-fgVDATkL~~~~~Lk~ 100 (389)
.++.+||=||=|.=..+..|++.. +..+|+ .|-..++.++ |+++. +..+..+. ...||..+.. .+..
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~--id~~~~~~~~---a~~~~---~~~~~~~~~~~~~a~~~~~--~~~~ 126 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAP--IDEHWI--IECNDGVFQR---LRDWA---PRQTHKVIPLKGLWEDVAP--TLPD 126 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSC--EEEEEE--EECCHHHHHH---HHHHG---GGCSSEEEEEESCHHHHGG--GSCT
T ss_pred cCCCeEEEECCCccHHHHHHHHhC--CcEEEE--EeCCHHHHHH---HHHHH---hhCCCceEEEeehHHhhcc--cccc
Confidence 467899999999999998888754 346665 4433444432 43332 33443332 3456655432 2345
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
..||.|+|+=..... ...|..-...||+.+..+|+|||.+..
T Consensus 127 ~~FD~i~~D~~~~~~---------~~~~~~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 127 GHFDGILYDTYPLSE---------ETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp TCEEEEEECCCCCBG---------GGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred cCCceEEEeeeeccc---------chhhhcchhhhhhhhhheeCCCCEEEE
Confidence 789999997322211 113444567889999999999998764
No 222
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=87.53 E-value=2.1 Score=42.16 Aligned_cols=95 Identities=14% Similarity=0.128 Sum_probs=62.1
Q ss_pred HHHHHHHHHhC-----CCEEEeccccCCCCCCCCcCCCCcceEEEcCCCCCC---C-CCcc------chHHHHHhHHHHH
Q 016441 69 AKSNLDNLKKL-----GTCILHGVDATTMELHPDLRTRKFDRIIFNFPHAGF---Y-GKED------NHLLIEMHRSLVR 133 (389)
Q Consensus 69 A~~Ni~~Lr~~-----Gv~VlfgVDATkL~~~~~Lk~~~FDrIIFNFPH~G~---~-gkED------~~r~Ir~nr~LL~ 133 (389)
.++|++.+.-. ....+...|++++.. +....||+|+-+=|+.|. . .++. ....+..-..|=.
T Consensus 188 l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~---~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~ 264 (359)
T 4fzv_A 188 LQKILHSYVPEEIRDGNQVRVTSWDGRKWGE---LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQV 264 (359)
T ss_dssp HHHHHHHHSCTTTTTSSSEEEECCCGGGHHH---HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHH
T ss_pred HHHHHHHhhhhhhccCCceEEEeCchhhcch---hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHH
Confidence 45676665321 123455678877643 235789999999999982 1 1111 1223333334445
Q ss_pred HHHHhhHhcccCCCeEEEEecCCCCCCcccHHH
Q 016441 134 DFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKE 166 (389)
Q Consensus 134 ~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~ 166 (389)
..+.+|..+|++||.+.-+.|+=.|-..-.+++
T Consensus 265 ~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~ 297 (359)
T 4fzv_A 265 QLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQ 297 (359)
T ss_dssp HHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHH
T ss_pred HHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHH
Confidence 678899999999999999999988876655555
No 223
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=86.08 E-value=2.6 Score=38.15 Aligned_cols=146 Identities=10% Similarity=0.110 Sum_probs=81.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCH--HHHHHhhhh-----------------------HHHHHHHH
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSY--DDVIQKYKR-----------------------AKSNLDNL 76 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSe--eeL~~KY~~-----------------------A~~Ni~~L 76 (389)
.++.+||=||=|.=-++..++.. + ..+|+|+=+... +.+.++... +++..+.+
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~-~-~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACD-S-FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGG-T-EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHh-h-hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 35678999999985565555433 2 236777655421 111111100 00000111
Q ss_pred HhCCCEEEeccccCCCCCCCCcCCCCcceEEEcCC--CCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEec
Q 016441 77 KKLGTCILHGVDATTMELHPDLRTRKFDRIIFNFP--HAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHK 154 (389)
Q Consensus 77 r~~Gv~VlfgVDATkL~~~~~Lk~~~FDrIIFNFP--H~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk 154 (389)
+. .++-..-.|+++...-..+....||.|+-+|= |+.. +..=+...++++..+|+|||.+.++-.
T Consensus 132 ~~-~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~------------~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 132 RA-AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACC------------SLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HH-HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCS------------SHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred Hh-hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcC------------CHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 11 23224556777743211122458999999872 2221 112245788999999999999998853
Q ss_pred CCC-------------CCCcccHHHHHhhCCcEEEEEeeCC
Q 016441 155 TTV-------------PFSNWNIKELAIGSSLSLIWCSEFK 182 (389)
Q Consensus 155 ~g~-------------PY~sWnIe~LAa~aGL~L~~~~~F~ 182 (389)
... +++.=.+.++.+++||.+++...+.
T Consensus 199 ~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~ 239 (263)
T 2a14_A 199 LRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSP 239 (263)
T ss_dssp SSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred ecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEeecc
Confidence 221 1233356778889999998877664
No 224
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=86.01 E-value=2.5 Score=39.95 Aligned_cols=126 Identities=12% Similarity=0.144 Sum_probs=79.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
+...+||=||=|.=.++..|++.+. ++..|.+|-. .+.+. +.. + .++++.. .|+.+ . +.
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p---~~~~~~~D~~-~~~~~---a~~----~--~~v~~~~-~d~~~-~----~~-- 250 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFP---HLKCTVFDQP-QVVGN---LTG----N--ENLNFVG-GDMFK-S----IP-- 250 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCT---TSEEEEEECH-HHHSS---CCC----C--SSEEEEE-CCTTT-C----CC--
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCC---CCeEEEeccH-HHHhh---ccc----C--CCcEEEe-CccCC-C----CC--
Confidence 5678999999999999999999873 3456677863 44332 211 1 2444443 36554 1 22
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccC---CCeEEEEecC-CC--------------------
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRD---GGEVHVSHKT-TV-------------------- 157 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~---~GeIHVTLk~-g~-------------------- 157 (389)
.||.|+.++.---. .| .-...+++.+..+|+| +|.+.|.-.. ..
T Consensus 251 ~~D~v~~~~vlh~~---~d---------~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~ 318 (358)
T 1zg3_A 251 SADAVLLKWVLHDW---ND---------EQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLT 318 (358)
T ss_dssp CCSEEEEESCGGGS---CH---------HHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHH
T ss_pred CceEEEEcccccCC---CH---------HHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhc
Confidence 39999998763322 11 1134778889999999 9988875321 11
Q ss_pred -----CCCcccHHHHHhhCCcEEEEEee
Q 016441 158 -----PFSNWNIKELAIGSSLSLIWCSE 180 (389)
Q Consensus 158 -----PY~sWnIe~LAa~aGL~L~~~~~ 180 (389)
.++.=+++++.+++||..++..+
T Consensus 319 ~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 346 (358)
T 1zg3_A 319 MFLGKERTKQEWEKLIYDAGFSSYKITP 346 (358)
T ss_dssp HHSCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCCCCCHHHHHHHHHHcCCCeeEEEe
Confidence 11112445678889999888765
No 225
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=85.97 E-value=0.89 Score=43.26 Aligned_cols=113 Identities=9% Similarity=0.024 Sum_probs=69.2
Q ss_pred cCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccc---cCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC
Q 016441 19 KHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSL---DSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH 95 (389)
Q Consensus 19 ~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSl---DSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~ 95 (389)
....++.+||=||=|-=.||..|++. + .|+|.-. .+...+ . .-. ++.+...+++++-++|++.+.
T Consensus 78 ~~~~~g~~VLDlGcG~G~~s~~la~~-~---~V~gvD~~~~~~~~~~-~-~~~----~~~~~~~~v~~~~~~D~~~l~-- 145 (305)
T 2p41_A 78 NLVTPEGKVVDLGCGRGGWSYYCGGL-K---NVREVKGLTKGGPGHE-E-PIP----MSTYGWNLVRLQSGVDVFFIP-- 145 (305)
T ss_dssp TSSCCCEEEEEETCTTSHHHHHHHTS-T---TEEEEEEECCCSTTSC-C-CCC----CCSTTGGGEEEECSCCTTTSC--
T ss_pred CCCCCCCEEEEEcCCCCHHHHHHHhc-C---CEEEEeccccCchhHH-H-HHH----hhhcCCCCeEEEeccccccCC--
Confidence 34566789999998888888889876 2 5666322 111111 0 000 011111357777777888764
Q ss_pred CCcCCCCcceEEEcCCC-CCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC
Q 016441 96 PDLRTRKFDRIIFNFPH-AGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT 156 (389)
Q Consensus 96 ~~Lk~~~FDrIIFNFPH-~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 156 (389)
..+||.|+-|.+. +|. . ...+...+ ..+..+..+|+|||.+.+....+
T Consensus 146 ----~~~fD~V~sd~~~~~g~---~-----~~d~~~~l-~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 146 ----PERCDTLLCDIGESSPN---P-----TVEAGRTL-RVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp ----CCCCSEEEECCCCCCSS---H-----HHHHHHHH-HHHHHHHHHCCTTCEEEEEESCC
T ss_pred ----cCCCCEEEECCccccCc---c-----hhhHHHHH-HHHHHHHHHhCCCCEEEEEeCCC
Confidence 2479999999854 342 1 11222222 47788889999999888876655
No 226
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=84.39 E-value=0.63 Score=46.39 Aligned_cols=108 Identities=15% Similarity=0.134 Sum_probs=69.6
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEeccccCCCCC-CCCcC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG--TCILHGVDATTMEL-HPDLR 99 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G--v~VlfgVDATkL~~-~~~Lk 99 (389)
.+.+||=++=|.=.||+-+|+..+.+..|+|--.+ .+..+ .+++|++...-.+ ++ +..-||.++-. ..
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~--~~av~---~~~~N~~~Ngl~~~~v~-v~~~Da~~~l~~~~--- 122 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDIS--SKAIE---IMKENFKLNNIPEDRYE-IHGMEANFFLRKEW--- 122 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSC--HHHHH---HHHHHHHHTTCCGGGEE-EECSCHHHHHHSCC---
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHhCCCCceEE-EEeCCHHHHHHHhh---
Confidence 36789888888888888888764323456655444 33322 3677877654223 44 44557766432 11
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV 157 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 157 (389)
..+||+|+.| | -|. ...|+..|.++|+++|.|++|.-+..
T Consensus 123 ~~~fD~V~lD-P-~g~----------------~~~~l~~a~~~Lk~gGll~~t~t~~~ 162 (392)
T 3axs_A 123 GFGFDYVDLD-P-FGT----------------PVPFIESVALSMKRGGILSLTATDTA 162 (392)
T ss_dssp SSCEEEEEEC-C-SSC----------------CHHHHHHHHHHEEEEEEEEEEECCHH
T ss_pred CCCCcEEEEC-C-CcC----------------HHHHHHHHHHHhCCCCEEEEEecchh
Confidence 3579999999 5 221 12588899999999999999985544
No 227
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=84.28 E-value=9.1 Score=35.24 Aligned_cols=124 Identities=11% Similarity=0.106 Sum_probs=82.5
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeccccCCCCCCCCcCC-
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG-TCILHGVDATTMELHPDLRT- 100 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G-v~VlfgVDATkL~~~~~Lk~- 100 (389)
++.+||=||=|.=..+.+||+.. ....++|+-.+. ..+ + .|..|++...-.+ +.|..+ |+-. .+..
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~-~al-~---~A~~N~~~~gl~~~i~~~~~-d~l~-----~l~~~ 82 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVE-GPY-Q---SAVKNVEAHGLKEKIQVRLA-NGLA-----AFEET 82 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSH-HHH-H---HHHHHHHHTTCTTTEEEEEC-SGGG-----GCCGG
T ss_pred CCCEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCH-HHH-H---HHHHHHHHcCCCceEEEEEC-chhh-----hcccC
Confidence 45789999999999999999863 344677766553 222 2 3677776543222 344333 4421 1222
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEE
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWC 178 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~ 178 (389)
..||.|+.. |- | .+++..++..+...|+++|.+.+.-.++. -.+.+...+.||.+.+.
T Consensus 83 ~~~D~Ivia----G~-G-----------g~~i~~Il~~~~~~L~~~~~lVlq~~~~~----~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 83 DQVSVITIA----GM-G-----------GRLIARILEEGLGKLANVERLILQPNNRE----DDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp GCCCEEEEE----EE-C-----------HHHHHHHHHHTGGGCTTCCEEEEEESSCH----HHHHHHHHHTTEEEEEE
T ss_pred cCCCEEEEc----CC-C-----------hHHHHHHHHHHHHHhCCCCEEEEECCCCH----HHHHHHHHHCCCEEEEE
Confidence 269998862 32 2 24688999999999999999998877654 36666777889888764
No 228
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=84.11 E-value=1.8 Score=43.78 Aligned_cols=105 Identities=19% Similarity=0.175 Sum_probs=66.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCCCCCcCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
.+..+||=||=|.=.++..|++. + ...|+|+-.+ + +.+ .|+++++...- ..++++ .-|+.++. +.
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~-~-~~~V~gvD~s--~-~l~---~A~~~~~~~gl~~~v~~~-~~d~~~~~----~~- 222 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAS--T-MAQ---HAEVLVKSNNLTDRIVVI-PGKVEEVS----LP- 222 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT-T-CSEEEEEECH--H-HHH---HHHHHHHHTTCTTTEEEE-ESCTTTCC----CS-
T ss_pred cCCCEEEEecCcccHHHHHHHHc-C-CCEEEEEEcH--H-HHH---HHHHHHHHcCCCCcEEEE-ECchhhCc----cC-
Confidence 35679999999998899988874 3 4578887654 3 322 25666654321 124444 44666542 22
Q ss_pred CCcceEEEcCC-CCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 101 RKFDRIIFNFP-HAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 101 ~~FDrIIFNFP-H~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
.+||.||.|.| +... +.. +...+..+..+|+++|.+.++.
T Consensus 223 ~~fD~Ivs~~~~~~~~------------~e~-~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 223 EQVDIIISEPMGYMLF------------NER-MLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp SCEEEEECCCCHHHHT------------CHH-HHHHHHHGGGGEEEEEEEESCE
T ss_pred CCeEEEEEeCchHhcC------------cHH-HHHHHHHHHHhcCCCCEEEEEe
Confidence 47999999977 2221 111 2345567889999999887554
No 229
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=84.04 E-value=3.3 Score=41.80 Aligned_cols=112 Identities=13% Similarity=0.030 Sum_probs=63.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHH----hhhhHHHHHHHHH--hCCCEEEeccccCCCCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQ----KYKRAKSNLDNLK--KLGTCILHGVDATTMELH 95 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~----KY~~A~~Ni~~Lr--~~Gv~VlfgVDATkL~~~ 95 (389)
.++++||=||=|.=++++.||+..+. ..+++.-.+. ++.+ ....++.|++.+. -..+.++.+ |+......
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~-~~V~GVDis~--~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~g-D~~~~~~~ 316 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGC-ALSFGCEIMD--DASDLTILQYEELKKRCKLYGMRLNNVEFSLK-KSFVDNNR 316 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC-SEEEEEECCH--HHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES-SCSTTCHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCC-CEEEEEeCCH--HHHHHHHHhHHHHHHHHHHcCCCCCceEEEEc-Cccccccc
Confidence 46789999999999999999988753 3565554443 2222 1112344444332 123444443 22211000
Q ss_pred CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 96 PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 96 ~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
.......||+|+.|....+ ++ +...++.+..+|++||.|.++
T Consensus 317 ~~~~~~~FDvIvvn~~l~~----~d-----------~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 317 VAELIPQCDVILVNNFLFD----ED-----------LNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HHHHGGGCSEEEECCTTCC----HH-----------HHHHHHHHHTTCCTTCEEEES
T ss_pred cccccCCCCEEEEeCcccc----cc-----------HHHHHHHHHHhCCCCeEEEEe
Confidence 0001257999999854422 11 224556777899999999876
No 230
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=83.24 E-value=12 Score=35.81 Aligned_cols=128 Identities=21% Similarity=0.231 Sum_probs=79.3
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
++...+||=||=|.=.++..|++.+. ++..|.+|- .++.+. +.. ..+++++ .-|+.+ . +..
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p---~~~~~~~D~-~~~~~~---a~~------~~~v~~~-~~d~~~--~---~p~ 261 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYP---SINAINFDL-PHVIQD---APA------FSGVEHL-GGDMFD--G---VPK 261 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCT---TCEEEEEEC-HHHHTT---CCC------CTTEEEE-ECCTTT--C---CCC
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCC---CCEEEEEeh-HHHHHh---hhh------cCCCEEE-ecCCCC--C---CCC
Confidence 55678999999999999999999873 344567776 444332 111 1234333 335543 1 112
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC--CC---------------------
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT--TV--------------------- 157 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~--g~--------------------- 157 (389)
. |.|+..+-.-.. .| +-...+++.+..+|+|+|.|.|.=.. ..
T Consensus 262 ~--D~v~~~~vlh~~---~~---------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~ 327 (368)
T 3reo_A 262 G--DAIFIKWICHDW---SD---------EHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYN 327 (368)
T ss_dssp C--SEEEEESCGGGB---CH---------HHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHS
T ss_pred C--CEEEEechhhcC---CH---------HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhc
Confidence 2 999987653221 11 12347889999999999999885321 11
Q ss_pred ----CCCcccHHHHHhhCCcEEEEEeeC
Q 016441 158 ----PFSNWNIKELAIGSSLSLIWCSEF 181 (389)
Q Consensus 158 ----PY~sWnIe~LAa~aGL~L~~~~~F 181 (389)
.++.=+++++.+++||..++..+-
T Consensus 328 ~~g~~rt~~e~~~ll~~AGF~~v~~~~~ 355 (368)
T 3reo_A 328 PGGKERTEKEFQALAMASGFRGFKVASC 355 (368)
T ss_dssp SBCCCCCHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCccCCHHHHHHHHHHCCCeeeEEEEe
Confidence 111123567888899988887654
No 231
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=82.56 E-value=1.6 Score=42.01 Aligned_cols=131 Identities=17% Similarity=0.199 Sum_probs=77.3
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC--------
Q 016441 24 NHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH-------- 95 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~-------- 95 (389)
..+||=+|=|.=.|+++||+. ...|+|.-.+ .+..+ .|+.|++...-.++++ ..-||.++-..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~--~~ai~---~a~~n~~~ng~~~v~~-~~~d~~~~~~~~~~~~~~~ 284 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN---FDRVLATEIA--KPSVA---AAQYNIAANHIDNVQI-IRMAAEEFTQAMNGVREFN 284 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG---SSEEEEECCC--HHHHH---HHHHHHHHTTCCSEEE-ECCCSHHHHHHHSSCCCCT
T ss_pred CCEEEEccCCCCHHHHHHHhc---CCEEEEEECC--HHHHH---HHHHHHHHcCCCceEE-EECCHHHHHHHHhhccccc
Confidence 467988888888888888874 2467665444 33332 3667765422123343 34466553210
Q ss_pred ----CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhC
Q 016441 96 ----PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGS 171 (389)
Q Consensus 96 ----~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~a 171 (389)
..+....||.||.|=|-.|. . ..+.++|+++|.|.+..|+..- -.-++..|..
T Consensus 285 ~l~~~~~~~~~fD~Vv~dPPr~g~------------~--------~~~~~~l~~~g~ivyvsc~p~t-~ard~~~l~~-- 341 (369)
T 3bt7_A 285 RLQGIDLKSYQCETIFVDPPRSGL------------D--------SETEKMVQAYPRILYISCNPET-LCKNLETLSQ-- 341 (369)
T ss_dssp TGGGSCGGGCCEEEEEECCCTTCC------------C--------HHHHHHHTTSSEEEEEESCHHH-HHHHHHHHHH--
T ss_pred cccccccccCCCCEEEECcCcccc------------H--------HHHHHHHhCCCEEEEEECCHHH-HHHHHHHHhh--
Confidence 01112479999999998763 1 1233445578888877775321 1124445543
Q ss_pred CcEEEEEeeCCCCCCCC
Q 016441 172 SLSLIWCSEFKIEDYPA 188 (389)
Q Consensus 172 GL~L~~~~~F~~~~YPG 188 (389)
|+.+.+..+|| .||.
T Consensus 342 ~y~~~~~~~~D--~FP~ 356 (369)
T 3bt7_A 342 THKVERLALFD--QFPY 356 (369)
T ss_dssp HEEEEEEEEEC--CSTT
T ss_pred CcEEEEEEeec--cCCC
Confidence 69999999998 4774
No 232
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=82.03 E-value=11 Score=35.57 Aligned_cols=127 Identities=14% Similarity=0.179 Sum_probs=78.2
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
++...+||=||=|.=.++..|++.+. . +-.|.+|- ..+.+. +++ ..++++. .-|+.+ . +.
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~--~~~~~~D~-~~~~~~---a~~------~~~v~~~-~~d~~~--~---~p- 245 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFP-K--LKCIVFDR-PQVVEN---LSG------SNNLTYV-GGDMFT--S---IP- 245 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCT-T--CEEEEEEC-HHHHTT---CCC------BTTEEEE-ECCTTT--C---CC-
T ss_pred cccCceEEEeCCCccHHHHHHHHHCC-C--CeEEEeeC-HHHHhh---ccc------CCCcEEE-eccccC--C---CC-
Confidence 45678999999999999999999873 2 34566676 444432 211 1234433 335543 1 21
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccC---CCeEEEEecC--CCC-----------------
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRD---GGEVHVSHKT--TVP----------------- 158 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~---~GeIHVTLk~--g~P----------------- 158 (389)
.||.|+.++----. .| .-...+++.+..+|+| +|.+.|.-.. ..+
T Consensus 246 -~~D~v~~~~~lh~~---~d---------~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~ 312 (352)
T 1fp2_A 246 -NADAVLLKYILHNW---TD---------KDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMA 312 (352)
T ss_dssp -CCSEEEEESCGGGS---CH---------HHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGG
T ss_pred -CccEEEeehhhccC---CH---------HHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHH
Confidence 29999998653221 11 1134788899999999 9998876321 111
Q ss_pred ------CCcccHHHHHhhCCcEEEEEee
Q 016441 159 ------FSNWNIKELAIGSSLSLIWCSE 180 (389)
Q Consensus 159 ------Y~sWnIe~LAa~aGL~L~~~~~ 180 (389)
++.=+++++.+++||..++..+
T Consensus 313 ~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 340 (352)
T 1fp2_A 313 CLNGKERNEEEWKKLFIEAGFQHYKISP 340 (352)
T ss_dssp GGTCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred hccCCCCCHHHHHHHHHHCCCCeeEEEe
Confidence 1111345677788888877655
No 233
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=81.62 E-value=0.81 Score=45.04 Aligned_cols=105 Identities=17% Similarity=0.129 Sum_probs=69.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH--------------hC-CCEEEecc
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLK--------------KL-GTCILHGV 87 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr--------------~~-Gv~VlfgV 87 (389)
.+.+||=+|=|.=.+++.+|+..+ +..|+|--.+ ++..+ -+++|++... .. ++.| ..-
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~--~~av~---~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v-~~~ 119 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-AEEVWLNDIS--EDAYE---LMKRNVMLNFDGELRESKGRAILKGEKTIVI-NHD 119 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESC--HHHHH---HHHHHHHHHCCSCCEECSSEEEEESSSEEEE-EES
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECC--HHHHH---HHHHHHHHhcccccccccccccccCCCceEE-EcC
Confidence 577899999999999999998764 3456665444 33322 3778888762 11 2333 344
Q ss_pred ccCCCCCCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC
Q 016441 88 DATTMELHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT 155 (389)
Q Consensus 88 DATkL~~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 155 (389)
||.++-... ...||.|+.| | .|. ...|+.+|..+|+++|.|+||..+
T Consensus 120 Da~~~~~~~---~~~fD~I~lD-P-~~~----------------~~~~l~~a~~~lk~gG~l~vt~td 166 (378)
T 2dul_A 120 DANRLMAER---HRYFHFIDLD-P-FGS----------------PMEFLDTALRSAKRRGILGVTATD 166 (378)
T ss_dssp CHHHHHHHS---TTCEEEEEEC-C-SSC----------------CHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cHHHHHHhc---cCCCCEEEeC-C-CCC----------------HHHHHHHHHHhcCCCCEEEEEeec
Confidence 766542211 3579999966 4 232 137889999999999999998643
No 234
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=81.54 E-value=10 Score=35.45 Aligned_cols=125 Identities=14% Similarity=0.142 Sum_probs=82.5
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeccccCCCCCCCCcCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG-TCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G-v~VlfgVDATkL~~~~~Lk~~ 101 (389)
++.+||=||=|.=-.+.+||+. +....++|+-.+. ..+ + .|+.|++...-.+ +.|.. -|+-..-. ...
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~-~al-~---~A~~N~~~~gl~~~I~v~~-gD~l~~~~----~~~ 89 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVD-GPF-Q---SAQKQVRSSGLTEQIDVRK-GNGLAVIE----KKD 89 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSH-HHH-H---HHHHHHHHTTCTTTEEEEE-CSGGGGCC----GGG
T ss_pred CCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCH-HHH-H---HHHHHHHHcCCCceEEEEe-cchhhccC----ccc
Confidence 4578999999999999999986 3344677766653 222 2 3777776543222 33333 24333211 123
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEE
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWC 178 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~ 178 (389)
.||.||. +|- | .+++..++..+...|+++|.+.+.-.++.+ .+.+...+.||.+.+.
T Consensus 90 ~~D~Ivi----agm-G-----------g~lI~~IL~~~~~~L~~~~~lIlq~~~~~~----~lr~~L~~~Gf~i~~E 146 (244)
T 3gnl_A 90 AIDTIVI----AGM-G-----------GTLIRTILEEGAAKLAGVTKLILQPNIAAW----QLREWSEQNNWLITSE 146 (244)
T ss_dssp CCCEEEE----EEE-C-----------HHHHHHHHHHTGGGGTTCCEEEEEESSCHH----HHHHHHHHHTEEEEEE
T ss_pred cccEEEE----eCC-c-----------hHHHHHHHHHHHHHhCCCCEEEEEcCCChH----HHHHHHHHCCCEEEEE
Confidence 6999886 442 2 257889999999999999999988776543 6666777788887653
No 235
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=80.83 E-value=22 Score=33.98 Aligned_cols=128 Identities=17% Similarity=0.203 Sum_probs=78.7
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
++...+||=||=|.=.++..|++.+. ++..|.+|- .++.+. +.. ..+++++ .-|+.+ . +..
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p---~~~~~~~D~-~~~~~~---a~~------~~~v~~~-~~D~~~-~----~p~ 259 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYP---TIKGVNFDL-PHVISE---APQ------FPGVTHV-GGDMFK-E----VPS 259 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCT---TCEEEEEEC-HHHHTT---CCC------CTTEEEE-ECCTTT-C----CCC
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCC---CCeEEEecC-HHHHHh---hhh------cCCeEEE-eCCcCC-C----CCC
Confidence 56778999999999999999999873 345577776 334332 211 1233332 335554 1 112
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC--CC---------------------
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT--TV--------------------- 157 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~--g~--------------------- 157 (389)
. |.|+..+---.. . .+-...+++++...|+|+|.+.|.=.. ..
T Consensus 260 ~--D~v~~~~vlh~~---~---------d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~ 325 (364)
T 3p9c_A 260 G--DTILMKWILHDW---S---------DQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHN 325 (364)
T ss_dssp C--SEEEEESCGGGS---C---------HHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHC
T ss_pred C--CEEEehHHhccC---C---------HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcc
Confidence 2 999876532211 1 112457889999999999999885321 11
Q ss_pred ----CCCcccHHHHHhhCCcEEEEEeeC
Q 016441 158 ----PFSNWNIKELAIGSSLSLIWCSEF 181 (389)
Q Consensus 158 ----PY~sWnIe~LAa~aGL~L~~~~~F 181 (389)
.++.=+++++.+++||..++..+.
T Consensus 326 ~~g~~rt~~e~~~ll~~AGF~~v~~~~~ 353 (364)
T 3p9c_A 326 PGGRERYEREFQALARGAGFTGVKSTYI 353 (364)
T ss_dssp SSCCCCBHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCCccCCHHHHHHHHHHCCCceEEEEEc
Confidence 111113567888899998887654
No 236
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=80.73 E-value=4.1 Score=40.34 Aligned_cols=109 Identities=23% Similarity=0.338 Sum_probs=67.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeccccCCCCCCCCcCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG-TCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G-v~VlfgVDATkL~~~~~Lk~~ 101 (389)
++++||=||-|-=-.|+-.|++ | +..|+|--... +.+ .|+.+++.-.-.+ ++|+.+ |++.+.. ..
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~a-G-A~~V~ave~s~---~~~---~a~~~~~~n~~~~~i~~i~~-~~~~~~l-----pe 148 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQA-G-ARRVYAVEASA---IWQ---QAREVVRFNGLEDRVHVLPG-PVETVEL-----PE 148 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECST---THH---HHHHHHHHTTCTTTEEEEES-CTTTCCC-----SS
T ss_pred CCCEEEEeCCCccHHHHHHHHh-C-CCEEEEEeChH---HHH---HHHHHHHHcCCCceEEEEee-eeeeecC-----Cc
Confidence 4678999999987666655554 3 56788876542 222 2555554332222 555554 7776642 26
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCe-------EEEEecCC
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGE-------VHVSHKTT 156 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~Ge-------IHVTLk~g 156 (389)
+||.||-+-=..+.. +..++..++.....+|+|+|. +++...+.
T Consensus 149 ~~DvivsE~~~~~l~-----------~e~~l~~~l~a~~r~Lkp~G~~iP~~atly~apie~ 199 (376)
T 4hc4_A 149 QVDAIVSEWMGYGLL-----------HESMLSSVLHARTKWLKEGGLLLPASAELFIVPISD 199 (376)
T ss_dssp CEEEEECCCCBTTBT-----------TTCSHHHHHHHHHHHEEEEEEEESCEEEEEEEEECC
T ss_pred cccEEEeeccccccc-----------ccchhhhHHHHHHhhCCCCceECCccceEEEEEecc
Confidence 799999875444431 223466777778889999874 55665554
No 237
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=80.66 E-value=1.6 Score=38.35 Aligned_cols=80 Identities=16% Similarity=0.031 Sum_probs=52.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCCCCCcCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
....+||=+|=|.=.++..|++. +..|+|.-++ +++.+ .++.|++...- ..+. +..-|+.++. ..
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~~~-~~~~d~~~~~-----~~ 142 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDID--PVKIA---LARNNAEVYGIADKIE-FICGDFLLLA-----SF 142 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHHHHTTCGGGEE-EEESCHHHHG-----GG
T ss_pred cCCCEEEECccccCHHHHHHHHc---CCEEEEEECC--HHHHH---HHHHHHHHcCCCcCeE-EEECChHHhc-----cc
Confidence 36789999999999999999985 2566665544 33333 25556544321 1233 3445777654 24
Q ss_pred CCcceEEEcCCCCCC
Q 016441 101 RKFDRIIFNFPHAGF 115 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~ 115 (389)
..||.|+.|.|..+.
T Consensus 143 ~~~D~v~~~~~~~~~ 157 (241)
T 3gdh_A 143 LKADVVFLSPPWGGP 157 (241)
T ss_dssp CCCSEEEECCCCSSG
T ss_pred CCCCEEEECCCcCCc
Confidence 689999999998764
No 238
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=79.99 E-value=5 Score=37.93 Aligned_cols=151 Identities=15% Similarity=0.133 Sum_probs=79.4
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCC----CcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCc
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSA----SNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDL 98 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~----~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~L 98 (389)
...+||=+|=|.=.|+.++++..... .++++.-.+.. .. .-|+.|+... ...+.+..+ |+-.. .
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~--~~---~~a~~n~~~~-g~~~~i~~~-D~l~~-----~ 197 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDL--LI---SLALVGADLQ-RQKMTLLHQ-DGLAN-----L 197 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHH--HH---HHHHHHHHHH-TCCCEEEES-CTTSC-----C
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHH--HH---HHHHHHHHhC-CCCceEEEC-CCCCc-----c
Confidence 45678877767777777777665321 45666655532 22 2355666533 224554443 54331 1
Q ss_pred CCCCcceEEEcCCCCCCCCCccchHHH-----HHhHHHHHHHHHhhHhcccCCCeEEEEecCCCC--CCcccHHHHHhhC
Q 016441 99 RTRKFDRIIFNFPHAGFYGKEDNHLLI-----EMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVP--FSNWNIKELAIGS 171 (389)
Q Consensus 99 k~~~FDrIIFNFPH~G~~gkED~~r~I-----r~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P--Y~sWnIe~LAa~a 171 (389)
...+||.||.|-|- |....++..... .....+-..|++.+..+|+++|.+.+.+.++-- -..-.|.+.-.+.
T Consensus 198 ~~~~fD~Ii~NPPf-g~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~ 276 (344)
T 2f8l_A 198 LVDPVDVVISDLPV-GYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKN 276 (344)
T ss_dssp CCCCEEEEEEECCC-SEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHH
T ss_pred ccCCccEEEECCCC-CCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhC
Confidence 24679999999993 211111100000 000112346899999999999999988854410 0122344444444
Q ss_pred CcEEEEEeeCCCCCCC
Q 016441 172 SLSLIWCSEFKIEDYP 187 (389)
Q Consensus 172 GL~L~~~~~F~~~~YP 187 (389)
++ +...+.+....|+
T Consensus 277 ~~-~~~ii~lp~~~F~ 291 (344)
T 2f8l_A 277 GH-IEGIIKLPETLFK 291 (344)
T ss_dssp EE-EEEEEECCGGGSC
T ss_pred Ce-EEEeeeCChhhcc
Confidence 54 3344555444443
No 239
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=79.92 E-value=7.4 Score=36.45 Aligned_cols=78 Identities=22% Similarity=0.175 Sum_probs=49.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.++++||=||=|.=.++..|++. +..|+|.-.|. .+.+ .+++|++...-.+++++. -|+.++.. .
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~--~~~~---~a~~~~~~~~~~~v~~~~-~D~~~~~~------~ 105 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDS--RMIS---EVKKRCLYEGYNNLEVYE-GDAIKTVF------P 105 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCH--HHHH---HHHHHHHHTTCCCEEC-----CCSSCC------C
T ss_pred CCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCH--HHHH---HHHHHHHHcCCCceEEEE-CchhhCCc------c
Confidence 56789999999999999999875 34787776663 2222 245555432212344443 47776532 3
Q ss_pred CcceEEEcCCCCC
Q 016441 102 KFDRIIFNFPHAG 114 (389)
Q Consensus 102 ~FDrIIFNFPH~G 114 (389)
.||.|+.|.|.-.
T Consensus 106 ~~D~Vv~n~py~~ 118 (299)
T 2h1r_A 106 KFDVCTANIPYKI 118 (299)
T ss_dssp CCSEEEEECCGGG
T ss_pred cCCEEEEcCCccc
Confidence 7999999999875
No 240
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=78.81 E-value=12 Score=35.17 Aligned_cols=117 Identities=11% Similarity=0.113 Sum_probs=70.3
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCc
Q 016441 20 HYSSNHQILLVGEGDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDL 98 (389)
Q Consensus 20 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~L 98 (389)
.-.++++||++|-|.. .++..||+..| .+++||+...+ +++.++++|+...+ -|...+.+
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~------------~~~~~~~lGa~~v~-~~~~~~~~---- 233 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEH------------KKQDALSMGVKHFY-TDPKQCKE---- 233 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSST------------THHHHHHTTCSEEE-SSGGGCCS----
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHH------------HHHHHHhcCCCeec-CCHHHHhc----
Confidence 4467899999998764 45556677765 47999875532 34566778986665 34433322
Q ss_pred CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC-CCCCcccHHHHHhhCCcEEEE
Q 016441 99 RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT-VPFSNWNIKELAIGSSLSLIW 177 (389)
Q Consensus 99 k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g-~PY~sWnIe~LAa~aGL~L~~ 177 (389)
.+|.|+=. +|. + ..+..+.++|+++|.|.+.=..+ .+....+...+....++.+..
T Consensus 234 ---~~D~vid~---~g~---~--------------~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g 290 (348)
T 3two_A 234 ---ELDFIIST---IPT---H--------------YDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYG 290 (348)
T ss_dssp ---CEEEEEEC---CCS---C--------------CCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEE
T ss_pred ---CCCEEEEC---CCc---H--------------HHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEE
Confidence 68877642 332 1 12456778899999887653222 233334544444344566655
Q ss_pred E
Q 016441 178 C 178 (389)
Q Consensus 178 ~ 178 (389)
.
T Consensus 291 ~ 291 (348)
T 3two_A 291 S 291 (348)
T ss_dssp C
T ss_pred E
Confidence 4
No 241
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=76.70 E-value=23 Score=32.69 Aligned_cols=131 Identities=13% Similarity=0.145 Sum_probs=86.0
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeccccCCCCCCCCcCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG-TCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G-v~VlfgVDATkL~~~~~Lk~~ 101 (389)
++.+||=||=|.=-.+.+||+. +....++|+-.+. ..+ + .|+.|++...-.+ +.|..+ |+-..-. ...
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~-~al-~---~A~~N~~~~gl~~~I~~~~g-D~l~~~~----~~~ 89 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVN-GPY-Q---SALKNVSEHGLTSKIDVRLA-NGLSAFE----EAD 89 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSH-HHH-H---HHHHHHHHTTCTTTEEEEEC-SGGGGCC----GGG
T ss_pred CCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCH-HHH-H---HHHHHHHHcCCCCcEEEEEC-chhhccc----ccc
Confidence 4678999999999999999986 3344677776653 222 2 3777876554222 455544 4433211 123
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEE-ee
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWC-SE 180 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~-~~ 180 (389)
.||.|+. +|- | -+++..++..+...|+++|.+.+.-..+ .-.+.+...+.||.+.+. .-
T Consensus 90 ~~D~Ivi----aGm-G-----------g~lI~~IL~~~~~~l~~~~~lIlqp~~~----~~~lr~~L~~~Gf~i~~E~lv 149 (230)
T 3lec_A 90 NIDTITI----CGM-G-----------GRLIADILNNDIDKLQHVKTLVLQPNNR----EDDLRKWLAANDFEIVAEDIL 149 (230)
T ss_dssp CCCEEEE----EEE-C-----------HHHHHHHHHHTGGGGTTCCEEEEEESSC----HHHHHHHHHHTTEEEEEEEEE
T ss_pred ccCEEEE----eCC-c-----------hHHHHHHHHHHHHHhCcCCEEEEECCCC----hHHHHHHHHHCCCEEEEEEEE
Confidence 7999885 342 2 2478889999999999999888877554 346777778889988763 33
Q ss_pred CCCC
Q 016441 181 FKIE 184 (389)
Q Consensus 181 F~~~ 184 (389)
++..
T Consensus 150 ~e~~ 153 (230)
T 3lec_A 150 TEND 153 (230)
T ss_dssp EC--
T ss_pred EECC
Confidence 4433
No 242
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=75.98 E-value=3.6 Score=33.27 Aligned_cols=73 Identities=12% Similarity=0.179 Sum_probs=45.3
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 24 NHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
..+|+++|=|.+ ..+|++.+ ..+..+++...| .+.++.+++.|+.++++ |+++........-..
T Consensus 6 ~~~v~I~G~G~i--G~~la~~L~~~g~~V~~id~~------------~~~~~~~~~~~~~~~~g-d~~~~~~l~~~~~~~ 70 (141)
T 3llv_A 6 RYEYIVIGSEAA--GVGLVRELTAAGKKVLAVDKS------------KEKIELLEDEGFDAVIA-DPTDESFYRSLDLEG 70 (141)
T ss_dssp CCSEEEECCSHH--HHHHHHHHHHTTCCEEEEESC------------HHHHHHHHHTTCEEEEC-CTTCHHHHHHSCCTT
T ss_pred CCEEEEECCCHH--HHHHHHHHHHCCCeEEEEECC------------HHHHHHHHHCCCcEEEC-CCCCHHHHHhCCccc
Confidence 468999999874 45555443 124567776544 22456677788887765 777643221122356
Q ss_pred cceEEEcCC
Q 016441 103 FDRIIFNFP 111 (389)
Q Consensus 103 FDrIIFNFP 111 (389)
.|.||.-.|
T Consensus 71 ~d~vi~~~~ 79 (141)
T 3llv_A 71 VSAVLITGS 79 (141)
T ss_dssp CSEEEECCS
T ss_pred CCEEEEecC
Confidence 899998666
No 243
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=74.27 E-value=10 Score=36.04 Aligned_cols=77 Identities=21% Similarity=0.286 Sum_probs=53.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.++++||=||=|.=.++..|++. +..|+|.-.|.. +.+ .++++++ ...+++|+.+ |+.++. +...
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~--li~---~a~~~~~--~~~~v~vi~g-D~l~~~----~~~~ 113 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKS--LEP---YANKLKE--LYNNIEIIWG-DALKVD----LNKL 113 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGG--GHH---HHHHHHH--HCSSEEEEES-CTTTSC----GGGS
T ss_pred CCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHH--HHH---HHHHHhc--cCCCeEEEEC-chhhCC----cccC
Confidence 46789999999999999999986 357888877743 111 2344444 2234666554 887764 3335
Q ss_pred CcceEEEcCCCC
Q 016441 102 KFDRIIFNFPHA 113 (389)
Q Consensus 102 ~FDrIIFNFPH~ 113 (389)
.||.||-|.|--
T Consensus 114 ~fD~Iv~NlPy~ 125 (295)
T 3gru_A 114 DFNKVVANLPYQ 125 (295)
T ss_dssp CCSEEEEECCGG
T ss_pred CccEEEEeCccc
Confidence 699999999953
No 244
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=72.00 E-value=9.3 Score=36.43 Aligned_cols=96 Identities=14% Similarity=0.146 Sum_probs=59.3
Q ss_pred CCCeEEEEe-cCCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCC-CCCcC
Q 016441 23 SNHQILLVG-EGDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMEL-HPDLR 99 (389)
Q Consensus 23 s~~rILLVG-EGDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~-~~~Lk 99 (389)
++++||++| -|.. .++..||++.+ +..|+||+-+. +.++.++++|+...+.-+. .+.+ -..+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~------------~~~~~~~~lGad~vi~~~~-~~~~~v~~~~ 236 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRP------------ETQEWVKSLGAHHVIDHSK-PLAAEVAALG 236 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSH------------HHHHHHHHTTCSEEECTTS-CHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCH------------HHHHHHHHcCCCEEEeCCC-CHHHHHHHhc
Confidence 677899999 7765 45556677653 46899997652 2456677899876543321 1100 01123
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
.+.+|.|+= .+|. . .-+..+.++|+++|.|.+.
T Consensus 237 ~~g~Dvvid---~~g~---~--------------~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 237 LGAPAFVFS---TTHT---D--------------KHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp SCCEEEEEE---CSCH---H--------------HHHHHHHHHSCTTCEEEEC
T ss_pred CCCceEEEE---CCCc---h--------------hhHHHHHHHhcCCCEEEEE
Confidence 467886654 2442 0 3466788899999998754
No 245
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=71.50 E-value=4.1 Score=38.14 Aligned_cols=99 Identities=17% Similarity=0.285 Sum_probs=60.3
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCc
Q 016441 20 HYSSNHQILLVGEGDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDL 98 (389)
Q Consensus 20 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~L 98 (389)
.-..+++||+.|=|.. .++..||++.| .+|+||+.+. ++++.++++|+...+..+...+.+...-
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~------------~~~~~~~~lGa~~~i~~~~~~~~~~~~~ 228 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDD------------AKLNLARRLGAEVAVNARDTDPAAWLQK 228 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCH------------HHHHHHHHTTCSEEEETTTSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCH------------HHHHHHHHcCCCEEEeCCCcCHHHHHHH
Confidence 4467899999998874 44555567765 4899986542 3456678899876543322221110000
Q ss_pred CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 99 RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 99 k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
....+|.|+.+- |. . .-+..+.++|+++|.|.+.
T Consensus 229 ~~g~~d~vid~~---g~---~--------------~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 229 EIGGAHGVLVTA---VS---P--------------KAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp HHSSEEEEEESS---CC---H--------------HHHHHHHHHEEEEEEEEEC
T ss_pred hCCCCCEEEEeC---CC---H--------------HHHHHHHHHhccCCEEEEe
Confidence 113689887763 32 0 2466677889999987654
No 246
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=71.07 E-value=11 Score=35.34 Aligned_cols=111 Identities=17% Similarity=0.177 Sum_probs=58.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC----CCEEEe-cccc------CC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL----GTCILH-GVDA------TT 91 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~----Gv~Vlf-gVDA------Tk 91 (389)
.+.+||=||=|.=..+..+++.. ...||++=+. ++.+ + .|+......... -..+-| -.|+ .+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S-~~~l-~---~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~ 120 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE--IALLVATDPD-ADAI-A---RGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSS 120 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT--CSEEEEEESC-HHHH-H---HHHHHHHHHCC----CCCEEEEEECCTTSSSHHHH
T ss_pred CCCeEEEEecCCcHhHHHHHhcC--CCeEEEEECC-HHHH-H---HHHHHHHhccccccccccccchhhhhcccchhhhh
Confidence 36789999888654444455432 3466655333 3333 2 133333322100 011222 2233 12
Q ss_pred CCCCCCcCCCCcceEEEcCC-CCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEec
Q 016441 92 MELHPDLRTRKFDRIIFNFP-HAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHK 154 (389)
Q Consensus 92 L~~~~~Lk~~~FDrIIFNFP-H~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk 154 (389)
|.+. +....||.|+..|= |--+ ..+ + +..+++++..+|+|||.+.++..
T Consensus 121 l~~~--~~~~~FD~V~~~~~lhy~~-~~~--------~---~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 121 VREV--FYFGKFNIIDWQFAIHYSF-HPR--------H---YATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp HHTT--CCSSCEEEEEEESCGGGTC-STT--------T---HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhcc--ccCCCeeEEEECchHHHhC-CHH--------H---HHHHHHHHHHHcCCCCEEEEEeC
Confidence 2111 23468999998772 1111 111 2 25889999999999999988764
No 247
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=70.41 E-value=13 Score=34.08 Aligned_cols=103 Identities=18% Similarity=0.129 Sum_probs=64.8
Q ss_pred cccCCC-CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCC
Q 016441 17 WIKHYS-SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMEL 94 (389)
Q Consensus 17 ~~~~Ys-s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~ 94 (389)
|+..+. ...+||=||=|.=.++..|++.. .+|+|+-. |.+ +.+ ..++ .++.++ .-|+.++.
T Consensus 32 ~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~-s~~-ml~----------~a~~~~~v~~~-~~~~e~~~- 94 (257)
T 4hg2_A 32 WLGEVAPARGDALDCGCGSGQASLGLAEFF---ERVHAVDP-GEA-QIR----------QALRHPRVTYA-VAPAEDTG- 94 (257)
T ss_dssp HHHHHSSCSSEEEEESCTTTTTHHHHHTTC---SEEEEEES-CHH-HHH----------TCCCCTTEEEE-ECCTTCCC-
T ss_pred HHHHhcCCCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeC-cHH-hhh----------hhhhcCCceee-hhhhhhhc-
Confidence 344333 34689999999988999998763 47877633 233 322 1122 234433 34666653
Q ss_pred CCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEec
Q 016441 95 HPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHK 154 (389)
Q Consensus 95 ~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk 154 (389)
+....||.|+.+.=. +-. + ...|++.+..+|+|||.+.|.-.
T Consensus 95 ---~~~~sfD~v~~~~~~---h~~-~-----------~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 95 ---LPPASVDVAIAAQAM---HWF-D-----------LDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp ---CCSSCEEEEEECSCC---TTC-C-----------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---ccCCcccEEEEeeeh---hHh-h-----------HHHHHHHHHHHcCCCCEEEEEEC
Confidence 556889999986421 111 1 23688999999999998877554
No 248
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=67.33 E-value=49 Score=31.51 Aligned_cols=127 Identities=13% Similarity=0.085 Sum_probs=79.5
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCCCCCcCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+.+||=||=|.=.|+..|++. | +..|+|.=... +.|.. .+++ ..+.++-..|+..+... .+...
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-g-a~~V~aVDvs~-~mL~~----------a~r~~~rv~~~~~~ni~~l~~~-~l~~~ 150 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-G-AKLVYAVDVGT-NQLVW----------KLRQDDRVRSMEQYNFRYAEPV-DFTEG 150 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSS-SCSCH----------HHHTCTTEEEECSCCGGGCCGG-GCTTC
T ss_pred cccEEEecCCCccHHHHHHHhC-C-CCEEEEEECCH-HHHHH----------HHHhCcccceecccCceecchh-hCCCC
Confidence 4568999999999999999876 3 45677754432 22211 1222 23444445666665421 23334
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC---CC--------C--------CCcc
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT---TV--------P--------FSNW 162 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~---g~--------P--------Y~sW 162 (389)
.||.|+++.-... +...|..+..+|+|+|.+.+..+. -. + +..-
T Consensus 151 ~fD~v~~d~sf~s-----------------l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~ 213 (291)
T 3hp7_A 151 LPSFASIDVSFIS-----------------LNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLE 213 (291)
T ss_dssp CCSEEEECCSSSC-----------------GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHH
T ss_pred CCCEEEEEeeHhh-----------------HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHH
Confidence 5999999764321 246778888999999999987431 11 1 0112
Q ss_pred cHHHHHhhCCcEEEEEee
Q 016441 163 NIKELAIGSSLSLIWCSE 180 (389)
Q Consensus 163 nIe~LAa~aGL~L~~~~~ 180 (389)
++.++++.+||.+.....
T Consensus 214 ~v~~~~~~~Gf~v~~~~~ 231 (291)
T 3hp7_A 214 TVTAFAVDYGFSVKGLDF 231 (291)
T ss_dssp HHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHCCCEEEEEEE
Confidence 356678899999888644
No 249
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=65.90 E-value=17 Score=33.68 Aligned_cols=117 Identities=12% Similarity=0.086 Sum_probs=70.2
Q ss_pred cCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC--CCEEEe-ccccCCCCCC
Q 016441 19 KHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL--GTCILH-GVDATTMELH 95 (389)
Q Consensus 19 ~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~--Gv~Vlf-gVDATkL~~~ 95 (389)
....++.+||=||=|.=.||..|++. ..|+|.=+... +.. +.++-...+.. ++.++. ..|++.|.
T Consensus 70 ~~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~m--~~~----a~~~~~~~~~~~~~v~~~~~~~D~~~l~-- 137 (265)
T 2oxt_A 70 GYVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYTL--GVG----GHEVPRITESYGWNIVKFKSRVDIHTLP-- 137 (265)
T ss_dssp TSCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEECC--CCS----SCCCCCCCCBTTGGGEEEECSCCTTTSC--
T ss_pred CCCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECchh--hhh----hhhhhhhhhccCCCeEEEecccCHhHCC--
Confidence 34456789999999999999999876 35777654431 100 00000000111 344442 45888764
Q ss_pred CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCC--eEEEEecCCCCCCc
Q 016441 96 PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGG--EVHVSHKTTVPFSN 161 (389)
Q Consensus 96 ~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~G--eIHVTLk~g~PY~s 161 (389)
...||.|+.|+.|... .. .+. +...+. .+..+..+|+|+| .+.+.... |+..
T Consensus 138 ----~~~fD~V~sd~~~~~~--~~----~~d-~~~~l~-~L~~~~r~LkpGG~~~fv~kv~~--~~~~ 191 (265)
T 2oxt_A 138 ----VERTDVIMCDVGESSP--KW----SVE-SERTIK-ILELLEKWKVKNPSADFVVKVLC--PYSV 191 (265)
T ss_dssp ----CCCCSEEEECCCCCCS--CH----HHH-HHHHHH-HHHHHHHHHHHCTTCEEEEEESC--TTSH
T ss_pred ----CCCCcEEEEeCcccCC--cc----chh-HHHHHH-HHHHHHHHhccCCCeEEEEEeCC--CCCh
Confidence 3679999999985532 11 111 111122 7788889999999 88887766 5554
No 250
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=64.18 E-value=30 Score=31.98 Aligned_cols=78 Identities=19% Similarity=0.223 Sum_probs=50.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCCCCCcCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
.++++||=||=|.=.++..|++.. ..++|.-.|. .+.+ .+.++++.... ..++++ .-|+.++..
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~--~~~~---~a~~~~~~~~~~~~v~~~-~~D~~~~~~------ 91 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDP--RLVA---ELHKRVQGTPVASKLQVL-VGDVLKTDL------ 91 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCH--HHHH---HHHHHHTTSTTGGGEEEE-ESCTTTSCC------
T ss_pred CCCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCH--HHHH---HHHHHHHhcCCCCceEEE-Ecceecccc------
Confidence 467899999999999999999862 4788776663 2222 23334321110 124444 458877632
Q ss_pred CCcceEEEcCCCCC
Q 016441 101 RKFDRIIFNFPHAG 114 (389)
Q Consensus 101 ~~FDrIIFNFPH~G 114 (389)
..||.|+.|.|.-.
T Consensus 92 ~~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 92 PFFDTCVANLPYQI 105 (285)
T ss_dssp CCCSEEEEECCGGG
T ss_pred hhhcEEEEecCccc
Confidence 26999999999875
No 251
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=63.02 E-value=10 Score=33.57 Aligned_cols=81 Identities=11% Similarity=0.185 Sum_probs=45.6
Q ss_pred ccCCCCCCeEEEEecC---Ch--hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH-HhCCCEEEeccccCC
Q 016441 18 IKHYSSNHQILLVGEG---DF--SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNL-KKLGTCILHGVDATT 91 (389)
Q Consensus 18 ~~~Yss~~rILLVGEG---DF--SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~L-r~~Gv~VlfgVDATk 91 (389)
.....++++||+.|=+ .. ..++.|++. +.+|+++..+.. ..+.++++ ++.|....+.+|.++
T Consensus 8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~---G~~V~~~~r~~~---------~~~~~~~~~~~~~~~~~~~~Dv~~ 75 (271)
T 3ek2_A 8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKRE---GAELAFTYVGDR---------FKDRITEFAAEFGSELVFPCDVAD 75 (271)
T ss_dssp -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHT---TCEEEEEESSGG---------GHHHHHHHHHHTTCCCEEECCTTC
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHHc---CCCEEEEecchh---------hHHHHHHHHHHcCCcEEEECCCCC
Confidence 4456677889999953 33 334444432 468888877632 12223333 234445567888887
Q ss_pred CCCCCCc------CCCCcceEEEcC
Q 016441 92 MELHPDL------RTRKFDRIIFNF 110 (389)
Q Consensus 92 L~~~~~L------k~~~FDrIIFNF 110 (389)
......+ +..+.|.+|.|=
T Consensus 76 ~~~v~~~~~~~~~~~g~id~lv~nA 100 (271)
T 3ek2_A 76 DAQIDALFASLKTHWDSLDGLVHSI 100 (271)
T ss_dssp HHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECC
Confidence 6543211 124789888773
No 252
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=62.85 E-value=19 Score=33.53 Aligned_cols=102 Identities=14% Similarity=0.098 Sum_probs=62.3
Q ss_pred CCEEEeccccCCCCCCCCcCCCCcceEEEcCCCCCCCC---CccchHHHHHhHHH---HHHHHHhhHhcccCCCeEEEEe
Q 016441 80 GTCILHGVDATTMELHPDLRTRKFDRIIFNFPHAGFYG---KEDNHLLIEMHRSL---VRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 80 Gv~VlfgVDATkL~~~~~Lk~~~FDrIIFNFPH~G~~g---kED~~r~Ir~nr~L---L~~FF~SA~~lL~~~GeIHVTL 153 (389)
|-..++.-|+.+.-. .+....||.||.|=|-..... ..++...+..+.+. +...++.|..+|+++|.+.|.+
T Consensus 20 ~~~~i~~gD~~~~l~--~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 20 GVHRLHVGDAREVLA--SFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp -CEEEEESCHHHHHT--TSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCEEEECcHHHHHh--hCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 334455668777321 234578999999999764211 11112223333333 5678889999999999999988
Q ss_pred cCCC----CCCcc-------cHHHHHhhCCcEEEEEeeCCC
Q 016441 154 KTTV----PFSNW-------NIKELAIGSSLSLIWCSEFKI 183 (389)
Q Consensus 154 k~g~----PY~sW-------nIe~LAa~aGL~L~~~~~F~~ 183 (389)
-+.+ .+..+ .+..+..+.|+.+.......+
T Consensus 98 ~d~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~~iiW~K 138 (297)
T 2zig_A 98 GDVAVARRRFGRHLVFPLHADIQVRCRKLGFDNLNPIIWHK 138 (297)
T ss_dssp CCEEEECC----EEEECHHHHHHHHHHHTTCEEEEEEEEEC
T ss_pred CCCccccccCCcccccccHHHHHHHHHHcCCeeeccEEEeC
Confidence 6532 11111 466788889999887665554
No 253
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=61.91 E-value=11 Score=35.65 Aligned_cols=100 Identities=20% Similarity=0.301 Sum_probs=58.1
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEecccc---CCCCCC
Q 016441 20 HYSSNHQILLVGEGDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDA---TTMELH 95 (389)
Q Consensus 20 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDA---TkL~~~ 95 (389)
...++++||++|-|.. .++..||+++| ...|+||..+. +.++.++++|+...+..+. .++.+.
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~------------~~~~~a~~lGa~~vi~~~~~~~~~~~~~ 234 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSA------------TRLSKAKEIGADLVLQISKESPQEIARK 234 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCH------------HHHHHHHHTTCSEEEECSSCCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCH------------HHHHHHHHhCCCEEEcCcccccchHHHH
Confidence 3467899999997753 35566677775 33788886542 2445677889864443320 111000
Q ss_pred -CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 96 -PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 96 -~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
..+....+|.|+=. +|. + ..+..+.++|+++|.|.+.
T Consensus 235 i~~~~~~g~D~vid~---~g~---~--------------~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 235 VEGQLGCKPEVTIEC---TGA---E--------------ASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp HHHHHTSCCSEEEEC---SCC---H--------------HHHHHHHHHSCTTCEEEEC
T ss_pred HHHHhCCCCCEEEEC---CCC---h--------------HHHHHHHHHhcCCCEEEEE
Confidence 00112468987643 332 1 1356677889999988654
No 254
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=61.64 E-value=12 Score=31.71 Aligned_cols=74 Identities=16% Similarity=0.245 Sum_probs=43.4
Q ss_pred CCeEEEEecCChhHHHHHH-HHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCc-CCC
Q 016441 24 NHQILLVGEGDFSFSLCLA-LAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDL-RTR 101 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa-~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~L-k~~ 101 (389)
+++|+++|=|.+--.++.. ...+ +..+++...|. +.++.+++.|+.++++ |+++...-... .-.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~-g~~V~vid~~~------------~~~~~~~~~g~~~~~g-d~~~~~~l~~~~~~~ 104 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARY-GKISLGIEIRE------------EAAQQHRSEGRNVISG-DATDPDFWERILDTG 104 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHH-CSCEEEEESCH------------HHHHHHHHTTCCEEEC-CTTCHHHHHTBCSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcc-CCeEEEEECCH------------HHHHHHHHCCCCEEEc-CCCCHHHHHhccCCC
Confidence 5689999999876555432 2220 34677665442 2345567789988776 66553211111 224
Q ss_pred CcceEEEcCC
Q 016441 102 KFDRIIFNFP 111 (389)
Q Consensus 102 ~FDrIIFNFP 111 (389)
..|.||.--|
T Consensus 105 ~ad~vi~~~~ 114 (183)
T 3c85_A 105 HVKLVLLAMP 114 (183)
T ss_dssp CCCEEEECCS
T ss_pred CCCEEEEeCC
Confidence 6899998655
No 255
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=61.61 E-value=25 Score=32.81 Aligned_cols=115 Identities=16% Similarity=0.143 Sum_probs=68.7
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC--CCEEEe-ccccCCCCCCC
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL--GTCILH-GVDATTMELHP 96 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~--Gv~Vlf-gVDATkL~~~~ 96 (389)
...++.+||=||=|.=.||..|++. ..|+|.=+... +.. +.++....+.. ++.++. ..|++.|.
T Consensus 79 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~m--~~~----a~~~~~~~~~~~~~v~~~~~~~D~~~l~--- 145 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYTL--GTS----GHEKPRLVETFGWNLITFKSKVDVTKME--- 145 (276)
T ss_dssp SCCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEECC--CCT----TSCCCCCCCCTTGGGEEEECSCCGGGCC---
T ss_pred CCCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECchh--hhh----hhhchhhhhhcCCCeEEEeccCcHhhCC---
Confidence 3456789999999999999999876 36777544431 100 10000000111 344442 45888764
Q ss_pred CcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCC--eEEEEecCCCCCC
Q 016441 97 DLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGG--EVHVSHKTTVPFS 160 (389)
Q Consensus 97 ~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~G--eIHVTLk~g~PY~ 160 (389)
...||.|+.|+.+... .. .+. +...+. .+..+..+|+|+| .+.+.... |+.
T Consensus 146 ---~~~fD~Vvsd~~~~~~--~~----~~d-~~~~l~-~L~~~~r~LkpGG~~~~v~~~~~--~~~ 198 (276)
T 2wa2_A 146 ---PFQADTVLCDIGESNP--TA----AVE-ASRTLT-VLNVISRWLEYNQGCGFCVKVLN--PYS 198 (276)
T ss_dssp ---CCCCSEEEECCCCCCS--CH----HHH-HHHHHH-HHHHHHHHHHHSTTCEEEEEESC--CCS
T ss_pred ---CCCcCEEEECCCcCCC--ch----hhh-HHHHHH-HHHHHHHHhccCCCcEEEEEeCC--CCc
Confidence 3679999999985532 11 111 111122 6788889999999 88887665 554
No 256
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=60.93 E-value=7.9 Score=35.76 Aligned_cols=89 Identities=17% Similarity=0.157 Sum_probs=55.9
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCc
Q 016441 20 HYSSNHQILLVGEGDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDL 98 (389)
Q Consensus 20 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~L 98 (389)
...++++||+.|=|.. .++..||+..| .+++||+ .. + +++.++++|+...+. |+.+ +
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~-~~-~-----------~~~~~~~lGa~~v~~-d~~~------v 196 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVS-AS-L-----------SQALAAKRGVRHLYR-EPSQ------V 196 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEC-SS-C-----------CHHHHHHHTEEEEES-SGGG------C
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEE-Ch-h-----------hHHHHHHcCCCEEEc-CHHH------h
Confidence 4467899999999765 56666788876 3899998 32 1 344566788866653 4222 2
Q ss_pred CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 99 RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 99 k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
...+|.|+ +. +|. + . +..+.++|+++|.+.+.
T Consensus 197 -~~g~Dvv~-d~--~g~---~--------------~-~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 197 -TQKYFAIF-DA--VNS---Q--------------N-AAALVPSLKANGHIICI 228 (315)
T ss_dssp -CSCEEEEE-CC---------------------------TTGGGEEEEEEEEEE
T ss_pred -CCCccEEE-EC--CCc---h--------------h-HHHHHHHhcCCCEEEEE
Confidence 56788664 42 442 1 1 24567889999987765
No 257
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=60.27 E-value=18 Score=34.37 Aligned_cols=95 Identities=16% Similarity=0.071 Sum_probs=59.9
Q ss_pred eccccCC-CCCCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC----CCC
Q 016441 85 HGVDATT-MELHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT----VPF 159 (389)
Q Consensus 85 fgVDATk-L~~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g----~PY 159 (389)
+.-|+.+ |. .+....||.|+.+=|--.....+-.+.....--..+...+..+..+|+++|.|.|.+.+. .|+
T Consensus 18 i~gD~~~~l~---~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~ 94 (323)
T 1boo_A 18 YIGDSLELLE---SFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPA 94 (323)
T ss_dssp EESCHHHHGG---GSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEEE
T ss_pred EeCcHHHHHh---hCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCcc
Confidence 3346654 32 234578999999988754211111111233344568888999999999999999998754 333
Q ss_pred C---ccc-HHHHHhhCCcEEEEEeeCC
Q 016441 160 S---NWN-IKELAIGSSLSLIWCSEFK 182 (389)
Q Consensus 160 ~---sWn-Ie~LAa~aGL~L~~~~~F~ 182 (389)
. .|. +.++..+.|+.+.......
T Consensus 95 ~~~~~~~~i~~~~~~~Gf~~~~~iiW~ 121 (323)
T 1boo_A 95 RSIYNFRVLIRMIDEVGFFLAEDFYWF 121 (323)
T ss_dssp ECCHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred cccchHHHHHHHHHhCCCEEEEEEEEe
Confidence 2 233 2245578999888766554
No 258
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=59.34 E-value=6.3 Score=34.53 Aligned_cols=121 Identities=14% Similarity=0.139 Sum_probs=60.7
Q ss_pred CCCeEEEEecCChhHHHHHHHHhC--CCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeccccCCCCCCCCc-
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFG--SASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTC-ILHGVDATTMELHPDL- 98 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~g--s~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~-VlfgVDATkL~~~~~L- 98 (389)
++++||+.|=..| .-.+|++.+- .+.+|++++.+.. . ....+++|++.|.. ..+.+|.++......+
T Consensus 3 ~~k~vlITGasgg-IG~~~a~~L~~~~g~~V~~~~r~~~-~-------~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~ 73 (276)
T 1wma_A 3 GIHVALVTGGNKG-IGLAIVRDLCRLFSGDVVLTARDVT-R-------GQAAVQQLQAEGLSPRFHQLDIDDLQSIRALR 73 (276)
T ss_dssp CCCEEEESSCSSH-HHHHHHHHHHHHSSSEEEEEESSHH-H-------HHHHHHHHHHTTCCCEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHhcCCeEEEEeCChH-H-------HHHHHHHHHhcCCeeEEEECCCCCHHHHHHHH
Confidence 4567999985543 3444544431 2568988887632 1 23345566665543 3466788775432111
Q ss_pred C-----CCCcceEEEcCCCCCCCCC-----ccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 99 R-----TRKFDRIIFNFPHAGFYGK-----EDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 99 k-----~~~FDrIIFNFPH~G~~gk-----ED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
+ ..+.|.||.|==-...... ++-...+..|-.-.....+.+.+.++++|.|..+
T Consensus 74 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 74 DFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp HHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 0 1368988876311111000 1122233334333334445555566556766554
No 259
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=59.29 E-value=19 Score=33.32 Aligned_cols=93 Identities=13% Similarity=0.219 Sum_probs=58.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.++++||=||=|.=.++..|++.. ..|+|.-.|.. +.+ .++++++. ..+++++. -|+.++.-.......
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~--~~~---~~~~~~~~--~~~v~~i~-~D~~~~~~~~~~~~~ 96 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRD--LVA---FLQKKYNQ--QKNITIYQ-NDALQFDFSSVKTDK 96 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHH--HHH---HHHHHHTT--CTTEEEEE-SCTTTCCGGGSCCSS
T ss_pred CCcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHH--HHH---HHHHHHhh--CCCcEEEE-cchHhCCHHHhccCC
Confidence 457899999999999999998752 57888777632 222 24444432 22455544 588887532212245
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhh
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNS 139 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA 139 (389)
.|| ||-|.|--= -..+|.+++...
T Consensus 97 ~~~-vv~NlPY~i-------------s~~il~~ll~~~ 120 (255)
T 3tqs_A 97 PLR-VVGNLPYNI-------------STPLLFHLFSQI 120 (255)
T ss_dssp CEE-EEEECCHHH-------------HHHHHHHHHHTG
T ss_pred CeE-EEecCCccc-------------CHHHHHHHHhCC
Confidence 788 999999631 234667777643
No 260
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=57.20 E-value=10 Score=35.46 Aligned_cols=99 Identities=14% Similarity=0.194 Sum_probs=60.6
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC-CC
Q 016441 20 HYSSNHQILLVGEGDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH-PD 97 (389)
Q Consensus 20 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~-~~ 97 (389)
.-.++++||++|-|.. .++..||++.| +..|+||..+ .++++.++++|+.....-+. .+.+. ..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~------------~~~~~~~~~lGa~~~i~~~~-~~~~~v~~ 233 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLD------------DDRLALAREVGADAAVKSGA-GAADAIRE 233 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESC------------HHHHHHHHHTTCSEEEECST-THHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCC------------HHHHHHHHHcCCCEEEcCCC-cHHHHHHH
Confidence 4567899999998864 34555677774 5689998554 23566778889865543221 11000 00
Q ss_pred c-CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 98 L-RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 98 L-k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
+ .+..+|.|+= .+|. + ..+..+.++|+++|.|.+.
T Consensus 234 ~t~g~g~d~v~d---~~G~---~--------------~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 234 LTGGQGATAVFD---FVGA---Q--------------STIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp HHGGGCEEEEEE---SSCC---H--------------HHHHHHHHHEEEEEEEEEC
T ss_pred HhCCCCCeEEEE---CCCC---H--------------HHHHHHHHHHhcCCEEEEE
Confidence 1 2347887664 2442 1 2567788899999987754
No 261
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=56.89 E-value=13 Score=35.55 Aligned_cols=100 Identities=18% Similarity=0.230 Sum_probs=59.4
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCC----C
Q 016441 20 HYSSNHQILLVGEGDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTME----L 94 (389)
Q Consensus 20 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~----~ 94 (389)
...++++||++|-|.. .++..||++.| ...|++|.-+. +.++.++++|+...+..+..++. +
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~------------~~~~~a~~lGa~~vi~~~~~~~~~~i~~ 245 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQA------------TKRRLAEEVGATATVDPSAGDVVEAIAG 245 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCH------------HHHHHHHHHTCSEEECTTSSCHHHHHHS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCH------------HHHHHHHHcCCCEEECCCCcCHHHHHHh
Confidence 3467899999998764 34555667765 34788875442 23455677888755443222211 1
Q ss_pred CCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 95 HPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 95 ~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
...+....+|.|+= . +|. . ..+..+..+|+++|.|.+.
T Consensus 246 ~~~~~~gg~Dvvid-~--~G~---~--------------~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 246 PVGLVPGGVDVVIE-C--AGV---A--------------ETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp TTSSSTTCEEEEEE-C--SCC---H--------------HHHHHHHHHEEEEEEEEEC
T ss_pred hhhccCCCCCEEEE-C--CCC---H--------------HHHHHHHHHhccCCEEEEE
Confidence 01122347887654 2 442 1 3466788899999988653
No 262
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=56.70 E-value=66 Score=29.46 Aligned_cols=111 Identities=13% Similarity=0.042 Sum_probs=64.8
Q ss_pred CCCeEEEEecCC---hhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC----
Q 016441 23 SNHQILLVGEGD---FSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH---- 95 (389)
Q Consensus 23 s~~rILLVGEGD---FSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~---- 95 (389)
...+||=||=|. =.++..+++.. .+..|++.=++ .++++. ++.++ ...+-.-+...|++++...
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~-p~~~v~~vD~s--p~~l~~---Ar~~~---~~~~~v~~~~~D~~~~~~~~~~~ 147 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVN-PDARVVYVDID--PMVLTH---GRALL---AKDPNTAVFTADVRDPEYILNHP 147 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHC-TTCEEEEEESS--HHHHHH---HHHHH---TTCTTEEEEECCTTCHHHHHHSH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhC-CCCEEEEEECC--hHHHHH---HHHhc---CCCCCeEEEEeeCCCchhhhccc
Confidence 347899998776 45555555543 34466554443 344332 44444 2233333445577654210
Q ss_pred ---CCcCCCCcceEEEcC--CCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC
Q 016441 96 ---PDLRTRKFDRIIFNF--PHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT 156 (389)
Q Consensus 96 ---~~Lk~~~FDrIIFNF--PH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 156 (389)
..+.-..||.|+.++ -|+.. ++ ....|+.+..+|++||.+.|+....
T Consensus 148 ~~~~~~d~~~~d~v~~~~vlh~~~d---~~-----------~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 148 DVRRMIDFSRPAAIMLVGMLHYLSP---DV-----------VDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHHCCTTSCCEEEETTTGGGSCT---TT-----------HHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred hhhccCCCCCCEEEEEechhhhCCc---HH-----------HHHHHHHHHHhCCCCcEEEEEEecC
Confidence 012224799999885 33321 11 3467888999999999999998765
No 263
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=56.69 E-value=15 Score=29.93 Aligned_cols=74 Identities=23% Similarity=0.284 Sum_probs=46.1
Q ss_pred CCeEEEEecCChhHHHHHH-HHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 24 NHQILLVGEGDFSFSLCLA-LAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa-~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
..+|+++|=|.+-.+++-. .. .+..+++...|. +.++.+++.|+.+++| |+++...-....-..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~--~g~~v~vid~~~------------~~~~~~~~~g~~~i~g-d~~~~~~l~~a~i~~ 71 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA--SDIPLVVIETSR------------TRVDELRERGVRAVLG-NAANEEIMQLAHLEC 71 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TTCCEEEEESCH------------HHHHHHHHTTCEEEES-CTTSHHHHHHTTGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCH------------HHHHHHHHcCCCEEEC-CCCCHHHHHhcCccc
Confidence 4689999999876655543 22 245677665552 2455677789998776 776643211112256
Q ss_pred cceEEEcCCC
Q 016441 103 FDRIIFNFPH 112 (389)
Q Consensus 103 FDrIIFNFPH 112 (389)
.|.||.-.|.
T Consensus 72 ad~vi~~~~~ 81 (140)
T 3fwz_A 72 AKWLILTIPN 81 (140)
T ss_dssp CSEEEECCSC
T ss_pred CCEEEEECCC
Confidence 8999886654
No 264
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=55.74 E-value=1e+02 Score=34.45 Aligned_cols=110 Identities=15% Similarity=0.017 Sum_probs=70.0
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh---CCC--EEEeccccCCCCCCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK---LGT--CILHGVDATTMELHPD 97 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~---~Gv--~VlfgVDATkL~~~~~ 97 (389)
...+||=||=|.=.++..|++..+....|++.-++ +++.+ .|..++..... .|. .-+..-|++++..
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS--~emLe---~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~--- 792 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDIS--PKGLA---RAAKMLHVKLNKEACNVKSATLYDGSILEFDS--- 792 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESC--HHHHH---HHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT---
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECC--HHHHH---HHHHHhhhccchhhcCCCceEEEECchHhCCc---
Confidence 67899999999999999999875333566665443 33333 25555554421 232 2334557877643
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEec
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHK 154 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk 154 (389)
....||.|+.+.---- .....+..|++.+..+|+|| .+.|+..
T Consensus 793 -~d~sFDlVV~~eVLeH------------L~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 793 -RLHDVDIGTCLEVIEH------------MEEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp -TSCSCCEEEEESCGGG------------SCHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred -ccCCeeEEEEeCchhh------------CChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 3478999999532111 11234567899999999998 7777653
No 265
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=55.26 E-value=19 Score=33.87 Aligned_cols=99 Identities=20% Similarity=0.254 Sum_probs=58.0
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEecccc-CCCCCC-C
Q 016441 20 HYSSNHQILLVGEGDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDA-TTMELH-P 96 (389)
Q Consensus 20 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDA-TkL~~~-~ 96 (389)
....+++||++|=|.. .++..||++.| ..|+||..+. +.++.++++|+...+..+- .++.+. .
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~------------~~~~~~~~lGa~~~~~~~~~~~~~~~i~ 230 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSP------------RRLEVAKNCGADVTLVVDPAKEEESSII 230 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCH------------HHHHHHHHTTCSEEEECCTTTSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCH------------HHHHHHHHhCCCEEEcCcccccHHHHHH
Confidence 3457899999997653 34556677765 3588886532 2345667889875544331 111100 0
Q ss_pred C-cC---CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 97 D-LR---TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 97 ~-Lk---~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
. .. +..+|.|+-+ +|. . .-+..+.++|+++|.|.+.
T Consensus 231 ~~~~~~~g~g~D~vid~---~g~---~--------------~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 231 ERIRSAIGDLPNVTIDC---SGN---E--------------KCITIGINITRTGGTLMLV 270 (352)
T ss_dssp HHHHHHSSSCCSEEEEC---SCC---H--------------HHHHHHHHHSCTTCEEEEC
T ss_pred HHhccccCCCCCEEEEC---CCC---H--------------HHHHHHHHHHhcCCEEEEE
Confidence 0 11 3569988643 332 1 1356677889999987653
No 266
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=55.19 E-value=15 Score=31.25 Aligned_cols=95 Identities=15% Similarity=0.251 Sum_probs=54.9
Q ss_pred CCCCCCeEEEEe-cCChhHHHHH-HHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCC
Q 016441 20 HYSSNHQILLVG-EGDFSFSLCL-ALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPD 97 (389)
Q Consensus 20 ~Yss~~rILLVG-EGDFSFSlSL-a~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~ 97 (389)
...++++||++| -|..-.+.+. ++..| .+|++++.+. + .++.+++.|+.... |.++-.....
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~-~-----------~~~~~~~~g~~~~~--d~~~~~~~~~ 98 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIG--ARIYTTAGSD-A-----------KREMLSRLGVEYVG--DSRSVDFADE 98 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHT--CEEEEEESSH-H-----------HHHHHHTTCCSEEE--ETTCSTHHHH
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcC--CEEEEEeCCH-H-----------HHHHHHHcCCCEEe--eCCcHHHHHH
Confidence 456788999999 5765544433 45554 5788887642 1 12345567875543 4433111000
Q ss_pred ----cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 98 ----LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 98 ----Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
.....+|.||-| +|. ..+..+.++|+++|.|.+
T Consensus 99 ~~~~~~~~~~D~vi~~---~g~------------------~~~~~~~~~l~~~G~~v~ 135 (198)
T 1pqw_A 99 ILELTDGYGVDVVLNS---LAG------------------EAIQRGVQILAPGGRFIE 135 (198)
T ss_dssp HHHHTTTCCEEEEEEC---CCT------------------HHHHHHHHTEEEEEEEEE
T ss_pred HHHHhCCCCCeEEEEC---Cch------------------HHHHHHHHHhccCCEEEE
Confidence 123469998855 342 125667788999997764
No 267
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=55.05 E-value=15 Score=34.10 Aligned_cols=121 Identities=17% Similarity=0.113 Sum_probs=69.5
Q ss_pred CCCCCCeEEEEe-cCChhHHH-HHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC-C
Q 016441 20 HYSSNHQILLVG-EGDFSFSL-CLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH-P 96 (389)
Q Consensus 20 ~Yss~~rILLVG-EGDFSFSl-SLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~-~ 96 (389)
...++++||++| -|..--+. .+|++.| .++++|+.+. +.++.++++|+...+..+...+.+. .
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~------------~~~~~~~~~Ga~~~~~~~~~~~~~~~~ 202 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKALG--AKLIGTVSSP------------EKAAHAKALGAWETIDYSHEDVAKRVL 202 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSH------------HHHHHHHHHTCSEEEETTTSCHHHHHH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCC--CEEEEEeCCH------------HHHHHHHHcCCCEEEeCCCccHHHHHH
Confidence 456789999999 67665443 3456665 4899987542 2344556678765544332221110 0
Q ss_pred -CcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEE
Q 016441 97 -DLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSL 175 (389)
Q Consensus 97 -~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L 175 (389)
...+..+|.|+-+ +|. + .+..+..+|+++|.|.+.=..+.+...++...+..+..+.+
T Consensus 203 ~~~~~~g~Dvvid~---~g~---~---------------~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~ 261 (325)
T 3jyn_A 203 ELTDGKKCPVVYDG---VGQ---D---------------TWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYV 261 (325)
T ss_dssp HHTTTCCEEEEEES---SCG---G---------------GHHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEE
T ss_pred HHhCCCCceEEEEC---CCh---H---------------HHHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEE
Confidence 0123578977653 342 1 34567788999998876544444444566666655544444
No 268
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=54.28 E-value=17 Score=34.45 Aligned_cols=100 Identities=18% Similarity=0.185 Sum_probs=58.5
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC-CC
Q 016441 20 HYSSNHQILLVGEGDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH-PD 97 (389)
Q Consensus 20 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~-~~ 97 (389)
....+++||++|-|.. .++..||+..| ...|+||..+. +.++.++++|+...+..+...+.+. ..
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~------------~~~~~a~~lGa~~vi~~~~~~~~~~~~~ 253 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVE------------SRLELAKQLGATHVINSKTQDPVAAIKE 253 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCH------------HHHHHHHHHTCSEEEETTTSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCH------------HHHHHHHHcCCCEEecCCccCHHHHHHH
Confidence 3567889999997753 35666778775 33688886542 2344566778765543322211110 01
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
+....+|.|+-. +|. ...+..+.++|+++|.|.+.
T Consensus 254 ~~~gg~D~vid~---~g~-----------------~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 254 ITDGGVNFALES---TGS-----------------PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp HTTSCEEEEEEC---SCC-----------------HHHHHHHHHTEEEEEEEEEC
T ss_pred hcCCCCcEEEEC---CCC-----------------HHHHHHHHHHHhcCCEEEEe
Confidence 112368987643 332 03466788899999987653
No 269
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=54.19 E-value=25 Score=33.30 Aligned_cols=100 Identities=16% Similarity=0.062 Sum_probs=58.9
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEecccc--CCCCCC-
Q 016441 20 HYSSNHQILLVGEGDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDA--TTMELH- 95 (389)
Q Consensus 20 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDA--TkL~~~- 95 (389)
....+++||++|-|.. .++..||++.| ...|+||..+.+ .++.++++|+...+..+. ..+.+.
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~------------~~~~a~~lGa~~vi~~~~~~~~~~~~i 254 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKD------------KFPKAIELGATECLNPKDYDKPIYEVI 254 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGG------------GHHHHHHTTCSEEECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHH------------HHHHHHHcCCcEEEecccccchHHHHH
Confidence 3457899999997764 35566678775 337888865421 344567789865543321 111110
Q ss_pred CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCC-CeEEEE
Q 016441 96 PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDG-GEVHVS 152 (389)
Q Consensus 96 ~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~-GeIHVT 152 (389)
..+....+|.|+=. +|. . ..+..+.++|+++ |.|.+.
T Consensus 255 ~~~t~gg~Dvvid~---~g~---~--------------~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 255 CEKTNGGVDYAVEC---AGR---I--------------ETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp HHHTTSCBSEEEEC---SCC---H--------------HHHHHHHHTBCTTTCEEEEC
T ss_pred HHHhCCCCCEEEEC---CCC---H--------------HHHHHHHHHHhcCCCEEEEE
Confidence 01112378987642 332 1 2356788899999 987643
No 270
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=54.07 E-value=22 Score=33.73 Aligned_cols=100 Identities=17% Similarity=0.132 Sum_probs=58.4
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEecccc--CCCCCC-
Q 016441 20 HYSSNHQILLVGEGDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDA--TTMELH- 95 (389)
Q Consensus 20 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDA--TkL~~~- 95 (389)
....+++||++|-|.. .++..||++.| ...|+||..+.+ .++.++++|+...+..+. ..+.+.
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~------------~~~~a~~lGa~~vi~~~~~~~~~~~~v 258 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGE------------KFPKAKALGATDCLNPRELDKPVQDVI 258 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGG------------GHHHHHHTTCSEEECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHH------------HHHHHHHhCCcEEEccccccchHHHHH
Confidence 4567899999997754 35556677775 337888865421 344567789865443321 111100
Q ss_pred CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCC-CeEEEE
Q 016441 96 PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDG-GEVHVS 152 (389)
Q Consensus 96 ~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~-GeIHVT 152 (389)
..+....+|.|+=. +|. ...+..+.++|+++ |.|.+.
T Consensus 259 ~~~~~~g~Dvvid~---~G~-----------------~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 259 TELTAGGVDYSLDC---AGT-----------------AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp HHHHTSCBSEEEES---SCC-----------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHhCCCccEEEEC---CCC-----------------HHHHHHHHHHhhcCCCEEEEE
Confidence 00112368987642 342 12366788899999 987643
No 271
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=53.94 E-value=43 Score=30.58 Aligned_cols=123 Identities=15% Similarity=0.158 Sum_probs=65.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccCCCCCCCCc--
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDATTMELHPDL-- 98 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDATkL~~~~~L-- 98 (389)
++++||+.|=+.+ .-+++|+.+ ..+.+|+.+..+..... +...+.+++.|..+ .+.+|.++......+
T Consensus 46 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 117 (291)
T 3ijr_A 46 KGKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDA-------NETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQ 117 (291)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHTTTCCEEEEESCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHH-------HHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 3567999996653 334444433 13568988888765322 22344556666544 467888875442211
Q ss_pred ----CCCCcceEEEcCCCCCC-C-----CCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 99 ----RTRKFDRIIFNFPHAGF-Y-----GKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 99 ----k~~~FDrIIFNFPH~G~-~-----gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
+..+.|.+|.|==-... . ..++-.+.+..|-.=.....+.+.+.++.+|.|..+-
T Consensus 118 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 118 ETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 12478999887321111 0 1112233344443223334455566677778766554
No 272
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=53.60 E-value=40 Score=30.52 Aligned_cols=123 Identities=11% Similarity=0.087 Sum_probs=65.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeccccCCCCCCCCc--
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTC-ILHGVDATTMELHPDL-- 98 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~-VlfgVDATkL~~~~~L-- 98 (389)
+++++|+.|=+.+ .-+++|+.+ ..+.+|+.+...+.+.+ +...++|++.|.. +.+.+|.++......+
T Consensus 30 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~-------~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~ 101 (271)
T 3v2g_A 30 AGKTAFVTGGSRG-IGAAIAKRLALEGAAVALTYVNAAERA-------QAVVSEIEQAGGRAVAIRADNRDAEAIEQAIR 101 (271)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHH-------HHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 3567999997652 334444433 13567888866664433 3345667777754 4567888875432211
Q ss_pred ----CCCCcceEEEcCCCCCCCC-----CccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 99 ----RTRKFDRIIFNFPHAGFYG-----KEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 99 ----k~~~FDrIIFNFPH~G~~g-----kED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
+..+.|.+|.|==-..... .++-.+.+..|-.=.....+.+.+.++.+|.|...-
T Consensus 102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 102 ETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 1147898887732111111 112223333342222333455666677778776553
No 273
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=52.17 E-value=85 Score=28.15 Aligned_cols=126 Identities=13% Similarity=0.139 Sum_probs=76.7
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCCCCCcCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.+.+||=||=|.=.|+..|++. + +..++|.=... +.+.. + +++ ..+.+.-.+|+..+.. ..+...
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g-~~~V~gvDis~-~ml~~----a------~~~~~~~~~~~~~~~~~~~~-~~~~~~ 102 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-G-AKLVYALDVGT-NQLAW----K------IRSDERVVVMEQFNFRNAVL-ADFEQG 102 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSC-CCCCH----H------HHTCTTEEEECSCCGGGCCG-GGCCSC
T ss_pred CCCEEEEEccCCCHHHHHHHhc-C-CCEEEEEcCCH-HHHHH----H------HHhCccccccccceEEEeCH-hHcCcC
Confidence 4568999999999999999986 3 34676654432 22111 1 121 1233444445544431 112223
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecC------------CC---CC----Ccc
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKT------------TV---PF----SNW 162 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~------------g~---PY----~sW 162 (389)
.||.+.|+...... ..+|..+..+|+|+|.+.+..+. |. |. ..-
T Consensus 103 ~~d~~~~D~v~~~l-----------------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~ 165 (232)
T 3opn_A 103 RPSFTSIDVSFISL-----------------DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIE 165 (232)
T ss_dssp CCSEEEECCSSSCG-----------------GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHH
T ss_pred CCCEEEEEEEhhhH-----------------HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHH
Confidence 47888888765431 46888999999999999997421 10 10 112
Q ss_pred cHHHHHhhCCcEEEEEe
Q 016441 163 NIKELAIGSSLSLIWCS 179 (389)
Q Consensus 163 nIe~LAa~aGL~L~~~~ 179 (389)
++.++++++||.+....
T Consensus 166 ~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 166 KVLKTATQLGFSVKGLT 182 (232)
T ss_dssp HHHHHHHHHTEEEEEEE
T ss_pred HHHHHHHHCCCEEEEEE
Confidence 46668889999988764
No 274
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=52.16 E-value=42 Score=29.68 Aligned_cols=122 Identities=12% Similarity=0.126 Sum_probs=59.6
Q ss_pred CCCeEEEEecCCh-hHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHH-HhCC--CEEEeccccCCCCCCCC
Q 016441 23 SNHQILLVGEGDF-SFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNL-KKLG--TCILHGVDATTMELHPD 97 (389)
Q Consensus 23 s~~rILLVGEGDF-SFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~L-r~~G--v~VlfgVDATkL~~~~~ 97 (389)
+++++|+.|=+.+ -.-+++|+.+ ..+.+|+++..+... .+.++++ ++.+ -...+.+|.++......
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 76 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERL---------EKSVHELAGTLDRNDSIILPCDVTNDAEIET 76 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG---------HHHHHHHHHTSSSCCCEEEECCCSSSHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHH---------HHHHHHHHHhcCCCCceEEeCCCCCHHHHHH
Confidence 3567999997654 2334444333 125678888765321 1122222 2223 24556788887654322
Q ss_pred c------CCCCcceEEEcCCCCC----CCCCc-----cchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 98 L------RTRKFDRIIFNFPHAG----FYGKE-----DNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 98 L------k~~~FDrIIFNFPH~G----~~gkE-----D~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
+ +..+.|.||.|=--.. ..... +-...+..|-.-.....+.+.+.++++|.|...-
T Consensus 77 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 77 CFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 1 1147898888743221 00111 1112233332222334455666777778766554
No 275
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=50.10 E-value=30 Score=38.36 Aligned_cols=129 Identities=10% Similarity=0.056 Sum_probs=70.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhC--CCCcEEeccccCHHHHHHhhhhHHHHHHH-HHhCCC--EEEeccccCCCCCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFG--SASNICASSLDSYDDVIQKYKRAKSNLDN-LKKLGT--CILHGVDATTMELHP 96 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~g--s~~nLvATSlDSeeeL~~KY~~A~~Ni~~-Lr~~Gv--~VlfgVDATkL~~~~ 96 (389)
..+.+||=.|=|.=+|..++++.++ ...+|++.-.|....-..+ ...|+.. ....|+ ..+.+-|...+.
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK---~RlNL~lN~LlhGi~~~~I~~dD~L~~~--- 393 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLS---IRLGLLFPQLVSSNNAPTITGEDVCSLN--- 393 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHH---HHHHTTSTTTCBTTBCCEEECCCGGGCC---
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHH---HHHHHHHhhhhcCCCcceEEecchhccc---
Confidence 3466787555555566677776653 2357888887754322211 1223221 001222 123333333321
Q ss_pred CcCCCCcceEEEcCCCCCCCCCccchHHH-HHh--------------HHHHHHHHHhhHhcccCCCeEEEEecCC
Q 016441 97 DLRTRKFDRIIFNFPHAGFYGKEDNHLLI-EMH--------------RSLVRDFFRNSSGMLRDGGEVHVSHKTT 156 (389)
Q Consensus 97 ~Lk~~~FDrIIFNFPH~G~~gkED~~r~I-r~n--------------r~LL~~FF~SA~~lL~~~GeIHVTLk~g 156 (389)
.....+||.||.|=|-.+....+...... ... ..+-..|++-|..+|+++|.+-+-+-++
T Consensus 394 ~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 394 PEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp GGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETH
T ss_pred ccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChH
Confidence 12346899999999997643321111100 000 1356679999999999999999888765
No 276
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=49.85 E-value=35 Score=34.93 Aligned_cols=120 Identities=20% Similarity=0.207 Sum_probs=67.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH----HhCCC---EE-EeccccCCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNL----KKLGT---CI-LHGVDATTME 93 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~L----r~~Gv---~V-lfgVDATkL~ 93 (389)
.++++||=||=|.=..++.||...+ ...+++--++ +++.+ -|+.|++.+ +..|. .| +..-|+.++.
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS--~~~le---lAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp 245 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKA--DIPAK---YAETMDREFRKWMKWYGKKHAEYTLERGDFLSEE 245 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECC--HHHHH---HHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCC--HHHHH---HHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCc
Confidence 4678999999888888888887764 2346665554 22222 144555443 22232 22 3345777653
Q ss_pred CCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHH
Q 016441 94 LHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKE 166 (389)
Q Consensus 94 ~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~ 166 (389)
... .-..||.|+.|.+... ++ .++.| ......|+|||.|. ++..-.| ..|.|..
T Consensus 246 ~~d--~~~~aDVVf~Nn~~F~----pd------l~~aL-----~Ei~RvLKPGGrIV-ssE~f~p-~d~~i~~ 299 (438)
T 3uwp_A 246 WRE--RIANTSVIFVNNFAFG----PE------VDHQL-----KERFANMKEGGRIV-SSKPFAP-LNFRINS 299 (438)
T ss_dssp HHH--HHHTCSEEEECCTTCC----HH------HHHHH-----HHHHTTSCTTCEEE-ESSCSSC-TTCCCCS
T ss_pred ccc--ccCCccEEEEcccccC----ch------HHHHH-----HHHHHcCCCCcEEE-EeecccC-CCCCCCc
Confidence 210 0136999999977532 11 22222 33446899999986 4544443 4465443
No 277
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=49.80 E-value=43 Score=32.23 Aligned_cols=76 Identities=13% Similarity=0.103 Sum_probs=44.2
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC-CC
Q 016441 20 HYSSNHQILLVGEGDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH-PD 97 (389)
Q Consensus 20 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~-~~ 97 (389)
....+++||++|-|.. .++..||++.| ...|+||.... +.++.++++|+...+..+...+.+. ..
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~------------~~~~~~~~lGa~~vi~~~~~~~~~~i~~ 276 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAG-ASKVILSEPSE------------VRRNLAKELGADHVIDPTKENFVEAVLD 276 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCH------------HHHHHHHHHTCSEEECTTTSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCH------------HHHHHHHHcCCCEEEcCCCCCHHHHHHH
Confidence 4567899999998764 34555677765 34788886442 2445567788765544322221110 00
Q ss_pred -cCCCCcceEEE
Q 016441 98 -LRTRKFDRIIF 108 (389)
Q Consensus 98 -Lk~~~FDrIIF 108 (389)
..++.+|.|+=
T Consensus 277 ~t~g~g~D~vid 288 (404)
T 3ip1_A 277 YTNGLGAKLFLE 288 (404)
T ss_dssp HTTTCCCSEEEE
T ss_pred HhCCCCCCEEEE
Confidence 12356897763
No 278
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=48.64 E-value=46 Score=30.42 Aligned_cols=124 Identities=11% Similarity=0.098 Sum_probs=63.5
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccCCCCCCCCc--
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDATTMELHPDL-- 98 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDATkL~~~~~L-- 98 (389)
+++++|+.|=+.+ .-+++|+.+ ..+.+|+.+..+..++- .+...+.+++.|..+ .+.+|.++......+
T Consensus 48 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 120 (294)
T 3r3s_A 48 KDRKALVTGGDSG-IGRAAAIAYAREGADVAINYLPAEEED------AQQVKALIEECGRKAVLLPGDLSDESFARSLVH 120 (294)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECCGGGHHH------HHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCcchhH------HHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHH
Confidence 3567999996543 334444433 13567888877643221 122334556666544 467788875432211
Q ss_pred ----CCCCcceEEEcCCCCCCCC-C-----ccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 99 ----RTRKFDRIIFNFPHAGFYG-K-----EDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 99 ----k~~~FDrIIFNFPH~G~~g-k-----ED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
...+.|.+|.|==-.+..+ . ++-.+.+..|-.=.....+.+.+.++.+|.|..+-
T Consensus 121 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 121 KAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 1257899888743221111 1 11123333342223334455566677778776654
No 279
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=48.08 E-value=28 Score=32.84 Aligned_cols=98 Identities=14% Similarity=0.127 Sum_probs=57.2
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC---
Q 016441 20 HYSSNHQILLVGEGDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH--- 95 (389)
Q Consensus 20 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~--- 95 (389)
....+++||++|-|.. .++..||++.| ...|+||..+.+ +++.++++|+...+ |.++....
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~------------~~~~~~~lGa~~vi--~~~~~~~~~~~ 251 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKD------------KFARAKEFGATECI--NPQDFSKPIQE 251 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGG------------GHHHHHHHTCSEEE--CGGGCSSCHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHH------------HHHHHHHcCCceEe--ccccccccHHH
Confidence 4567899999997754 34556677775 337888865421 23445567876443 33321110
Q ss_pred --CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCC-CeEEEE
Q 016441 96 --PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDG-GEVHVS 152 (389)
Q Consensus 96 --~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~-GeIHVT 152 (389)
..+....+|.|+=. +|. ...+..+.++|+++ |.|.+.
T Consensus 252 ~v~~~~~~g~D~vid~---~g~-----------------~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 252 VLIEMTDGGVDYSFEC---IGN-----------------VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp HHHHHTTSCBSEEEEC---SCC-----------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHHHhCCCCCEEEEC---CCc-----------------HHHHHHHHHhhccCCcEEEEE
Confidence 01112368987643 332 12356788899999 987653
No 280
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=48.04 E-value=26 Score=32.54 Aligned_cols=146 Identities=14% Similarity=0.202 Sum_probs=76.1
Q ss_pred CCCeEEEEecCC-hhHHHHHHHH--h---CCC-----CcEEecccc--CHHHHHH---hhhhHHHHHHHHHhC-------
Q 016441 23 SNHQILLVGEGD-FSFSLCLALA--F---GSA-----SNICASSLD--SYDDVIQ---KYKRAKSNLDNLKKL------- 79 (389)
Q Consensus 23 s~~rILLVGEGD-FSFSlSLa~~--~---gs~-----~nLvATSlD--SeeeL~~---KY~~A~~Ni~~Lr~~------- 79 (389)
+..+||=||=|- ++|...+... + ... .++|+.-.+ +.+++.+ .||.-..-.++|-+.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 445799999886 7776655421 1 221 355655544 3344443 344432233333221
Q ss_pred --------C-CEE-EeccccCC-CCCCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHH-HHHHHHhhHhcccCCC
Q 016441 80 --------G-TCI-LHGVDATT-MELHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSL-VRDFFRNSSGMLRDGG 147 (389)
Q Consensus 80 --------G-v~V-lfgVDATk-L~~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~L-L~~FF~SA~~lL~~~G 147 (389)
| ++| ++--||.+ |..........||.|+++ |+ ... .|-+| -..||.....+|+++|
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD----~f-sp~-------~~p~lw~~~~l~~l~~~L~pGG 207 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLD----GF-APA-------KNPDMWTQNLFNAMARLARPGG 207 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEEC----SS-CTT-------TCGGGCCHHHHHHHHHHEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEEC----CC-Ccc-------cChhhcCHHHHHHHHHHcCCCc
Confidence 1 221 34446666 332211112379999997 22 110 12222 2378999999999999
Q ss_pred eEEEEecCCCCCCcccHHHHHhhCCcEEEEEeeCCCCCCCCCccccC
Q 016441 148 EVHVSHKTTVPFSNWNIKELAIGSSLSLIWCSEFKIEDYPAYNNKRG 194 (389)
Q Consensus 148 eIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~~F~~~~YPGY~hKRt 194 (389)
.+. |-... . .+...-..+||.+.+. ||+..||.
T Consensus 208 ~l~-tysaa----~-~vrr~L~~aGF~v~~~--------~g~~~kr~ 240 (257)
T 2qy6_A 208 TLA-TFTSA----G-FVRRGLQEAGFTMQKR--------KGFGRKRE 240 (257)
T ss_dssp EEE-ESCCB----H-HHHHHHHHHTEEEEEE--------CCSTTCCC
T ss_pred EEE-EEeCC----H-HHHHHHHHCCCEEEeC--------CCCCCCCc
Confidence 766 32211 1 3444555689998765 55555554
No 281
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=47.85 E-value=34 Score=32.30 Aligned_cols=100 Identities=12% Similarity=0.107 Sum_probs=57.6
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEecccc--CCCCCC-
Q 016441 20 HYSSNHQILLVGEGDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDA--TTMELH- 95 (389)
Q Consensus 20 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDA--TkL~~~- 95 (389)
....+++||++|-|.. .++..||++.| ...|+||+.+.+ +++.++++|+...+..+. ..+.+.
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~------------~~~~~~~lGa~~vi~~~~~~~~~~~~~ 254 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKD------------KFAKAKEVGATECVNPQDYKKPIQEVL 254 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGG------------GHHHHHHTTCSEEECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHH------------HHHHHHHhCCceEecccccchhHHHHH
Confidence 4457899999997753 34555677765 337888865421 344567788865443321 111110
Q ss_pred CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCC-CeEEEE
Q 016441 96 PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDG-GEVHVS 152 (389)
Q Consensus 96 ~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~-GeIHVT 152 (389)
..+....+|.|+=. +|. . ..+..+.++|+++ |.|.+.
T Consensus 255 ~~~~~~g~D~vid~---~g~---~--------------~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 255 TEMSNGGVDFSFEV---IGR---L--------------DTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp HHHTTSCBSEEEEC---SCC---H--------------HHHHHHHHHBCTTTCEEEEC
T ss_pred HHHhCCCCcEEEEC---CCC---H--------------HHHHHHHHHhhcCCcEEEEe
Confidence 01112378987643 332 0 2356678889999 987653
No 282
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=47.58 E-value=18 Score=35.89 Aligned_cols=75 Identities=23% Similarity=0.355 Sum_probs=47.8
Q ss_pred CCCeEEEEecCChhHHHHHH-HHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 23 SNHQILLVGEGDFSFSLCLA-LAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa-~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
...+|++||=|.|...++-. .. .+..+|+--.| .+.++.+++.|+.|++| |||+...-....-.
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~--~g~~vvvId~d------------~~~v~~~~~~g~~vi~G-Dat~~~~L~~agi~ 67 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLS--SGVKMVVLDHD------------PDHIETLRKFGMKVFYG-DATRMDLLESAGAA 67 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEECC------------HHHHHHHHHTTCCCEES-CTTCHHHHHHTTTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CCCCEEEEECC------------HHHHHHHHhCCCeEEEc-CCCCHHHHHhcCCC
Confidence 45679999999876655532 22 24567666554 23466677889999888 99886432112235
Q ss_pred CcceEEEcCCC
Q 016441 102 KFDRIIFNFPH 112 (389)
Q Consensus 102 ~FDrIIFNFPH 112 (389)
..|.||--.|.
T Consensus 68 ~A~~viv~~~~ 78 (413)
T 3l9w_A 68 KAEVLINAIDD 78 (413)
T ss_dssp TCSEEEECCSS
T ss_pred ccCEEEECCCC
Confidence 67888876553
No 283
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=47.37 E-value=44 Score=29.97 Aligned_cols=124 Identities=16% Similarity=0.195 Sum_probs=64.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeccccCCCCCCCCc--
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTC-ILHGVDATTMELHPDL-- 98 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~-VlfgVDATkL~~~~~L-- 98 (389)
+++++|+.|=+. -.-+++|+.+ ..+.+|+++...+.+.+ +...++|++.|.. ..+.+|.++......+
T Consensus 17 ~~k~~lVTGas~-gIG~aia~~l~~~G~~V~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 17 DGKVALVTGSGR-GIGAAVAVHLGRLGAKVVVNYANSTKDA-------EKVVSEIKALGSDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp TTCEEEESCTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCCHHHH-------HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 456789998654 2344444443 13568888776665433 3345667777754 4567888876543211
Q ss_pred ----CCCCcceEEEcCCCCCCCCC-----ccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEec
Q 016441 99 ----RTRKFDRIIFNFPHAGFYGK-----EDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHK 154 (389)
Q Consensus 99 ----k~~~FDrIIFNFPH~G~~gk-----ED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk 154 (389)
+..+.|.+|.|==-...... ++-.+.+..|-.=.....+.+.+.++++|.|...--
T Consensus 89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 11468888866221111111 112223333322222233445556666887776543
No 284
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=46.88 E-value=20 Score=31.46 Aligned_cols=75 Identities=13% Similarity=0.201 Sum_probs=40.5
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCC-CCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCc
Q 016441 20 HYSSNHQILLVGEGDFSFSLCLALAFGS-ASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDL 98 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlSLa~~~gs-~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~L 98 (389)
++....+|+++|-|. +...|++.+.. +. +++...|. + .++.++ .|+.+++| |+++...-...
T Consensus 5 ~~~~~~~viI~G~G~--~G~~la~~L~~~g~-v~vid~~~--~----------~~~~~~-~~~~~i~g-d~~~~~~l~~a 67 (234)
T 2aef_A 5 DVAKSRHVVICGWSE--STLECLRELRGSEV-FVLAEDEN--V----------RKKVLR-SGANFVHG-DPTRVSDLEKA 67 (234)
T ss_dssp -----CEEEEESCCH--HHHHHHHHSTTSEE-EEEESCGG--G----------HHHHHH-TTCEEEES-CTTCHHHHHHT
T ss_pred CCCCCCEEEEECCCh--HHHHHHHHHHhCCe-EEEEECCH--H----------HHHHHh-cCCeEEEc-CCCCHHHHHhc
Confidence 455677899999985 55667766632 23 44443331 1 234455 78888765 77764321111
Q ss_pred CCCCcceEEEcCC
Q 016441 99 RTRKFDRIIFNFP 111 (389)
Q Consensus 99 k~~~FDrIIFNFP 111 (389)
.-...|.||.-.|
T Consensus 68 ~i~~ad~vi~~~~ 80 (234)
T 2aef_A 68 NVRGARAVIVDLE 80 (234)
T ss_dssp TCTTCSEEEECCS
T ss_pred CcchhcEEEEcCC
Confidence 1246788887543
No 285
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=46.84 E-value=18 Score=34.10 Aligned_cols=97 Identities=16% Similarity=0.149 Sum_probs=57.2
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccC-CCCCCCC
Q 016441 20 HYSSNHQILLVGEGDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDAT-TMELHPD 97 (389)
Q Consensus 20 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDAT-kL~~~~~ 97 (389)
....+++||++|-|.. .++..||+..| ..|+||+.+.+ .++.++++|+...+..+.. .+.+ .
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~------------~~~~~~~lGa~~v~~~~~~~~~~~--~ 239 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSR------------KREDAMKMGADHYIATLEEGDWGE--K 239 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSST------------THHHHHHHTCSEEEEGGGTSCHHH--H
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHH------------HHHHHHHcCCCEEEcCcCchHHHH--H
Confidence 3467899999998764 34556677775 36999886532 2344556787655444322 1111 1
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
+. ..+|.||=.-+..+. ..+..+.++|+++|.|.+
T Consensus 240 ~~-~~~D~vid~~g~~~~------------------~~~~~~~~~l~~~G~iv~ 274 (360)
T 1piw_A 240 YF-DTFDLIVVCASSLTD------------------IDFNIMPKAMKVGGRIVS 274 (360)
T ss_dssp SC-SCEEEEEECCSCSTT------------------CCTTTGGGGEEEEEEEEE
T ss_pred hh-cCCCEEEECCCCCcH------------------HHHHHHHHHhcCCCEEEE
Confidence 12 469988765443100 113456778899997754
No 286
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=46.00 E-value=42 Score=31.82 Aligned_cols=100 Identities=19% Similarity=0.181 Sum_probs=59.9
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEecccc--CCCCCC-
Q 016441 20 HYSSNHQILLVGEGDFS-FSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDA--TTMELH- 95 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFS-FSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDA--TkL~~~- 95 (389)
...++++||++|-|..- ++..||++.| ...|+||..+.+ .++.++++|+...+..+. ..+.+.
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~------------~~~~a~~lGa~~vi~~~~~~~~~~~~i 256 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSK------------KYETAKKFGVNEFVNPKDHDKPIQEVI 256 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTT------------HHHHHHTTTCCEEECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHH------------HHHHHHHcCCcEEEccccCchhHHHHH
Confidence 45678999999988643 4455567775 347999875532 345667889876544321 111100
Q ss_pred CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCC-CeEEEE
Q 016441 96 PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDG-GEVHVS 152 (389)
Q Consensus 96 ~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~-GeIHVT 152 (389)
..+....+|.|+=. +|. ...+..+.++|+++ |.|.+.
T Consensus 257 ~~~~~gg~D~vid~---~g~-----------------~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 257 VDLTDGGVDYSFEC---IGN-----------------VSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp HHHTTSCBSEEEEC---SCC-----------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHhcCCCCCEEEEC---CCC-----------------HHHHHHHHHHhhccCCEEEEE
Confidence 01122378987643 442 13567788899996 887654
No 287
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=46.00 E-value=56 Score=29.94 Aligned_cols=122 Identities=12% Similarity=0.165 Sum_probs=60.9
Q ss_pred CCCeEEEEecCCh-hHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHH-hCCCEEEeccccCCCCCCCCc-
Q 016441 23 SNHQILLVGEGDF-SFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLK-KLGTCILHGVDATTMELHPDL- 98 (389)
Q Consensus 23 s~~rILLVGEGDF-SFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr-~~Gv~VlfgVDATkL~~~~~L- 98 (389)
+++++|+.|=+.+ -.-+++|+.+ ..+.+|+++..+. ... +.++++. +.|..+.+.+|.++......+
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~--~~~-------~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 100 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGD--ALK-------KRVEPLAEELGAFVAGHCDVADAASIDAVF 100 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSH--HHH-------HHHHHHHHHHTCEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCH--HHH-------HHHHHHHHhcCCceEEECCCCCHHHHHHHH
Confidence 4568999997654 1333333332 1246788887662 111 1222222 234456678898886543221
Q ss_pred -----CCCCcceEEEcCCCCC----CC-----CCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 99 -----RTRKFDRIIFNFPHAG----FY-----GKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 99 -----k~~~FDrIIFNFPH~G----~~-----gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
+..+.|.+|.|==-.. .. ..++-.+.+..|-.-.....+.+.+.++.+|.|...-
T Consensus 101 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 101 ETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp HHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 1257899988732111 00 0111223344443333334455556666677766443
No 288
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=45.96 E-value=36 Score=32.15 Aligned_cols=100 Identities=15% Similarity=0.146 Sum_probs=57.8
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEecccc--CCCCCC-
Q 016441 20 HYSSNHQILLVGEGDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDA--TTMELH- 95 (389)
Q Consensus 20 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDA--TkL~~~- 95 (389)
....+++||++|-|.. .++..||++.| ...|+||+.+.+ .++.++++|+...+..+. ..+.+.
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~------------~~~~~~~lGa~~vi~~~~~~~~~~~~~ 255 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPD------------KFEKAKVFGATDFVNPNDHSEPISQVL 255 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGG------------GHHHHHHTTCCEEECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHH------------HHHHHHHhCCceEEeccccchhHHHHH
Confidence 4567889999997653 34556677765 337888865421 344567788865443321 111110
Q ss_pred CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCC-CeEEEE
Q 016441 96 PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDG-GEVHVS 152 (389)
Q Consensus 96 ~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~-GeIHVT 152 (389)
..+....+|.||=. +|. . ..+..+.++|+++ |.|.+.
T Consensus 256 ~~~~~~g~D~vid~---~g~---~--------------~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 256 SKMTNGGVDFSLEC---VGN---V--------------GVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp HHHHTSCBSEEEEC---SCC---H--------------HHHHHHHHTBCTTTCEEEEC
T ss_pred HHHhCCCCCEEEEC---CCC---H--------------HHHHHHHHHhhcCCcEEEEE
Confidence 00112368987643 342 1 3356788899999 987653
No 289
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=45.89 E-value=40 Score=30.63 Aligned_cols=82 Identities=7% Similarity=0.028 Sum_probs=53.1
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEEe
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWCS 179 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~ 179 (389)
..+||.|+.+=|-.-....-|..........++...+..+..+|+++|.|.|.+.+ +..-.+..+..+.|+.+....
T Consensus 21 ~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d---~~~~~~~~~~~~~gf~~~~~i 97 (260)
T 1g60_A 21 NKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTP---FNCAFICQYLVSKGMIFQNWI 97 (260)
T ss_dssp TTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECH---HHHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCc---HHHHHHHHHHHhhccceeEEE
Confidence 46799999999975320000110022344567888899899999999999998732 222234445667899888877
Q ss_pred eCCCC
Q 016441 180 EFKIE 184 (389)
Q Consensus 180 ~F~~~ 184 (389)
.....
T Consensus 98 iW~K~ 102 (260)
T 1g60_A 98 TWDKR 102 (260)
T ss_dssp EECCC
T ss_pred EEEec
Confidence 66544
No 290
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=44.53 E-value=14 Score=33.52 Aligned_cols=89 Identities=13% Similarity=0.139 Sum_probs=46.4
Q ss_pred hccccccCCCCCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccC
Q 016441 13 KEEKWIKHYSSNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDAT 90 (389)
Q Consensus 13 ~~~K~~~~Yss~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDAT 90 (389)
..+.+..+-.+++++|+.|=+.+ .-+++|+.+ ..+.+|++++.+. + ..++..++|++.|..+ .+.+|.+
T Consensus 13 ~~~~~~~~m~~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~-~-------~~~~~~~~l~~~~~~~~~~~~Dv~ 83 (279)
T 3sju_A 13 GLVPRGSHMSRPQTAFVTGVSSG-IGLAVARTLAARGIAVYGCARDA-K-------NVSAAVDGLRAAGHDVDGSSCDVT 83 (279)
T ss_dssp ------------CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCH-H-------HHHHHHHHHHTTTCCEEEEECCTT
T ss_pred ccCCCcccccCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCH-H-------HHHHHHHHHHhcCCcEEEEECCCC
Confidence 33455555666778999996543 344444433 1256888888763 2 2344567787777554 4667887
Q ss_pred CCCCCCCc------CCCCcceEEEcC
Q 016441 91 TMELHPDL------RTRKFDRIIFNF 110 (389)
Q Consensus 91 kL~~~~~L------k~~~FDrIIFNF 110 (389)
+......+ +..+.|.+|.|=
T Consensus 84 d~~~v~~~~~~~~~~~g~id~lv~nA 109 (279)
T 3sju_A 84 STDEVHAAVAAAVERFGPIGILVNSA 109 (279)
T ss_dssp CHHHHHHHHHHHHHHHCSCCEEEECC
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEECC
Confidence 75432111 124789888874
No 291
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=43.80 E-value=56 Score=28.89 Aligned_cols=80 Identities=18% Similarity=0.182 Sum_probs=48.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEeccccCCCCCCCCc-
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG--TCILHGVDATTMELHPDL- 98 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G--v~VlfgVDATkL~~~~~L- 98 (389)
+++++|+.|=.++-.-+++++.+ ..+.+|++++.+.. ..++..++|++.+ -...+.+|.++......+
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~--------~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~ 92 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHER--------RLGETRDQLADLGLGRVEAVVCDVTSTEAVDALI 92 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHH--------HHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHH--------HHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHH
Confidence 46679999974444555555543 23568998887642 1334556666654 345677888876543211
Q ss_pred -----CCCCcceEEEcC
Q 016441 99 -----RTRKFDRIIFNF 110 (389)
Q Consensus 99 -----k~~~FDrIIFNF 110 (389)
+..+.|.||.|=
T Consensus 93 ~~~~~~~g~id~li~~A 109 (266)
T 3o38_A 93 TQTVEKAGRLDVLVNNA 109 (266)
T ss_dssp HHHHHHHSCCCEEEECC
T ss_pred HHHHHHhCCCcEEEECC
Confidence 114789888873
No 292
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=43.73 E-value=35 Score=31.88 Aligned_cols=46 Identities=20% Similarity=0.348 Sum_probs=32.3
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV 157 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 157 (389)
..+||.|+... + .|..........++.....|+|||.+.+.+.++.
T Consensus 211 ~~~fDlI~crn--v----------liyf~~~~~~~vl~~~~~~L~pgG~L~lg~sE~~ 256 (274)
T 1af7_A 211 PGPFDAIFCRN--V----------MIYFDKTTQEDILRRFVPLLKPDGLLFAGHSENF 256 (274)
T ss_dssp CCCEEEEEECS--S----------GGGSCHHHHHHHHHHHGGGEEEEEEEEECTTCCC
T ss_pred CCCeeEEEECC--c----------hHhCCHHHHHHHHHHHHHHhCCCcEEEEEecccc
Confidence 35799999832 1 1222344456778888899999999999877664
No 293
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=43.30 E-value=27 Score=33.07 Aligned_cols=97 Identities=15% Similarity=0.155 Sum_probs=57.9
Q ss_pred CCCCCCeEEEEe-cCChh-HHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCC-
Q 016441 20 HYSSNHQILLVG-EGDFS-FSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHP- 96 (389)
Q Consensus 20 ~Yss~~rILLVG-EGDFS-FSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~- 96 (389)
....+++||++| -|..- .+..+|+..| .+|+||+.+. +.++.++++|+...+..+...+.+..
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~------------~~~~~~~~~Ga~~~~~~~~~~~~~~~~ 225 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAK--CHVIGTCSSD------------EKSAFLKSLGCDRPINYKTEPVGTVLK 225 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHTT--CEEEEEESSH------------HHHHHHHHTTCSEEEETTTSCHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhCC--CEEEEEECCH------------HHHHHHHHcCCcEEEecCChhHHHHHH
Confidence 456789999999 57654 4445567664 4799987642 23445667888765544322211100
Q ss_pred CcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 97 DLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 97 ~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
.+....+|.||-+ +|. ..+..+.++|+++|.|.+
T Consensus 226 ~~~~~g~D~vid~---~g~------------------~~~~~~~~~l~~~G~iv~ 259 (362)
T 2c0c_A 226 QEYPEGVDVVYES---VGG------------------AMFDLAVDALATKGRLIV 259 (362)
T ss_dssp HHCTTCEEEEEEC---SCT------------------HHHHHHHHHEEEEEEEEE
T ss_pred HhcCCCCCEEEEC---CCH------------------HHHHHHHHHHhcCCEEEE
Confidence 0123468988755 342 124567788899997654
No 294
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=42.94 E-value=41 Score=33.07 Aligned_cols=122 Identities=16% Similarity=0.079 Sum_probs=67.5
Q ss_pred CCCeEEEEecCChhHHHHHHHHhC------------CCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC---CCEEEecc
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFG------------SASNICASSLDSYDDVIQKYKRAKSNLDNLKKL---GTCILHGV 87 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~g------------s~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~---Gv~VlfgV 87 (389)
...+||=.|=|.=+|..++++... ...++++.-.+... +.-|..|+. |... .+.|.++
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~-----~~lA~~nl~-l~g~~~~~~~i~~g- 243 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLV-----VTLASMNLY-LHGIGTDRSPIVCE- 243 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHH-----HHHHHHHHH-HTTCCSSCCSEEEC-
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHH-----HHHHHHHHH-HhCCCcCCCCEeeC-
Confidence 456888776676677777776531 12457776665321 122455554 2222 2334333
Q ss_pred ccCCCCCCCCcCCCCcceEEEcCCCCCCCCCccc--hHHHH-HhHHHHHHHHHhhHhcccCCCeEEEEecCC
Q 016441 88 DATTMELHPDLRTRKFDRIIFNFPHAGFYGKEDN--HLLIE-MHRSLVRDFFRNSSGMLRDGGEVHVSHKTT 156 (389)
Q Consensus 88 DATkL~~~~~Lk~~~FDrIIFNFPH~G~~gkED~--~r~Ir-~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 156 (389)
|+-.... ..+||.||-|-|-.+....+.. ..... .....-..|++.+..+|+++|.+-+.+.++
T Consensus 244 D~l~~~~-----~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~ 310 (445)
T 2okc_A 244 DSLEKEP-----STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDN 310 (445)
T ss_dssp CTTTSCC-----SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CCCCCcc-----cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCc
Confidence 4433221 2489999999998874222110 00000 000112378899999999999998877543
No 295
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=42.68 E-value=49 Score=27.76 Aligned_cols=58 Identities=14% Similarity=0.221 Sum_probs=38.3
Q ss_pred CeEEEEecCChhHHHHHHHH----hCCCCcEEecccc---CHHHHHHhhhhHHHHHHHHHhCCCEEEecc
Q 016441 25 HQILLVGEGDFSFSLCLALA----FGSASNICASSLD---SYDDVIQKYKRAKSNLDNLKKLGTCILHGV 87 (389)
Q Consensus 25 ~rILLVGEGDFSFSlSLa~~----~gs~~nLvATSlD---SeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgV 87 (389)
-.|++|+=|+ ||.+|+.. +|...++.|-++. +.+++.+|. ++-++.+...|+-|+-++
T Consensus 6 i~iiivsHG~--~A~gl~~~~~~i~G~~~~i~ai~~~~~~~~~~~~~~i---~~~i~~~~~~gvliLtDl 70 (142)
T 3bed_A 6 PKLILMSHGR--MAEETLASTQMIVGELADAAIVSMTAEDGLSGTQAKL---AAILKEAGNVPTLVLADL 70 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHCTTCCCEEEEECTTTHHHHHHHHH---HHHHHHHCSCCEEEEESS
T ss_pred ccEEEEcChH--HHHHHHHHHHHHcCCCCCEEEEEecCCCCHHHHHHHH---HHHHHhcCCCCEEEEEEC
Confidence 3699999997 88888754 3655677777665 335666664 445566655567666444
No 296
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=42.03 E-value=27 Score=33.32 Aligned_cols=95 Identities=17% Similarity=0.245 Sum_probs=53.7
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCc
Q 016441 20 HYSSNHQILLVGEGDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDL 98 (389)
Q Consensus 20 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~L 98 (389)
....+++||++|-|.. .++..||+..| ..|+||+...+ .++.++++|+...+..+..+.. ..+
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~Vi~~~~~~~------------~~~~a~~lGa~~vi~~~~~~~~--~~~ 254 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMG--AHVVAFTTSEA------------KREAAKALGADEVVNSRNADEM--AAH 254 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSGG------------GHHHHHHHTCSEEEETTCHHHH--HTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHH------------HHHHHHHcCCcEEeccccHHHH--HHh
Confidence 3567899999998753 34555667765 46888875432 2334556777554332211100 011
Q ss_pred CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 99 RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 99 k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
. ..+|.|+-. +|. . .-+..+.++|+++|.|.+
T Consensus 255 ~-~g~Dvvid~---~g~---~--------------~~~~~~~~~l~~~G~iv~ 286 (369)
T 1uuf_A 255 L-KSFDFILNT---VAA---P--------------HNLDDFTTLLKRDGTMTL 286 (369)
T ss_dssp T-TCEEEEEEC---CSS---C--------------CCHHHHHTTEEEEEEEEE
T ss_pred h-cCCCEEEEC---CCC---H--------------HHHHHHHHHhccCCEEEE
Confidence 1 468887643 332 1 114456778899998764
No 297
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=40.57 E-value=60 Score=29.22 Aligned_cols=74 Identities=14% Similarity=0.193 Sum_probs=43.5
Q ss_pred CCeEEEEecCCh-----hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeccccCCCCCCCC
Q 016441 24 NHQILLVGEGDF-----SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKL-GTCILHGVDATTMELHPD 97 (389)
Q Consensus 24 ~~rILLVGEGDF-----SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~-Gv~VlfgVDATkL~~~~~ 97 (389)
+++||+.|=+.+ ..++.|++. +.+|++++.+.. .+.+++|++. +-...+.+|.++......
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~---G~~V~~~~r~~~----------~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~ 92 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHRE---GAELAFTYVGQF----------KDRVEKLCAEFNPAAVLPCDVISDQEIKD 92 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHT---TCEEEEEECTTC----------HHHHHHHHGGGCCSEEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHc---CCEEEEeeCchH----------HHHHHHHHHhcCCceEEEeecCCHHHHHH
Confidence 567999995433 455555543 468888887751 1234444333 334566788887653221
Q ss_pred c------CCCCcceEEEcC
Q 016441 98 L------RTRKFDRIIFNF 110 (389)
Q Consensus 98 L------k~~~FDrIIFNF 110 (389)
+ ...+.|.||.|=
T Consensus 93 ~~~~~~~~~g~id~li~nA 111 (280)
T 3nrc_A 93 LFVELGKVWDGLDAIVHSI 111 (280)
T ss_dssp HHHHHHHHCSSCCEEEECC
T ss_pred HHHHHHHHcCCCCEEEECC
Confidence 1 125789999874
No 298
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=40.49 E-value=49 Score=30.26 Aligned_cols=118 Identities=9% Similarity=0.138 Sum_probs=60.1
Q ss_pred CCeEEEEecC---Ch--hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHH-HHHhCCCEEEeccccCCCCCCCC
Q 016441 24 NHQILLVGEG---DF--SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLD-NLKKLGTCILHGVDATTMELHPD 97 (389)
Q Consensus 24 ~~rILLVGEG---DF--SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~-~Lr~~Gv~VlfgVDATkL~~~~~ 97 (389)
++++|+.|=+ .. ..++.|++. +.+|+++..+... .+.++ .+++.|..+.+.+|.++......
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~---G~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 97 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQ---GAEVALTYLSETF---------KKRVDPLAESLGVKLTVPCDVSDAESVDN 97 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHT---TCEEEEEESSGGG---------HHHHHHHHHHHTCCEEEECCTTCHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHC---CCEEEEEeCChHH---------HHHHHHHHHhcCCeEEEEcCCCCHHHHHH
Confidence 5679999965 22 344444442 5678888776321 11111 22233445677889888654322
Q ss_pred c------CCCCcceEEEcCCCCCC---------CCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 98 L------RTRKFDRIIFNFPHAGF---------YGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 98 L------k~~~FDrIIFNFPH~G~---------~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
+ +..+.|.+|.|==-... ...++-.+.+..|-.-.....+.+...++.+|.|...-
T Consensus 98 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 98 MFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 1 11578998887322110 00111223333443333344455556666677776543
No 299
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=39.50 E-value=76 Score=27.94 Aligned_cols=69 Identities=12% Similarity=0.140 Sum_probs=43.3
Q ss_pred CeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCCc
Q 016441 25 HQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRKF 103 (389)
Q Consensus 25 ~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~F 103 (389)
.+||++| +.| --.+|++.+ ..+..|++++.+.. ..+.|+..++.++. .|.+++. -...
T Consensus 6 ~~ilVtG-aG~-iG~~l~~~L~~~g~~V~~~~r~~~------------~~~~~~~~~~~~~~-~D~~d~~------~~~~ 64 (286)
T 3ius_A 6 GTLLSFG-HGY-TARVLSRALAPQGWRIIGTSRNPD------------QMEAIRASGAEPLL-WPGEEPS------LDGV 64 (286)
T ss_dssp CEEEEET-CCH-HHHHHHHHHGGGTCEEEEEESCGG------------GHHHHHHTTEEEEE-SSSSCCC------CTTC
T ss_pred CcEEEEC-CcH-HHHHHHHHHHHCCCEEEEEEcChh------------hhhhHhhCCCeEEE-ecccccc------cCCC
Confidence 5899999 533 244455444 23568999887642 22345556776654 5888865 2568
Q ss_pred ceEEEcCCCCC
Q 016441 104 DRIIFNFPHAG 114 (389)
Q Consensus 104 DrIIFNFPH~G 114 (389)
|.||.+-....
T Consensus 65 d~vi~~a~~~~ 75 (286)
T 3ius_A 65 THLLISTAPDS 75 (286)
T ss_dssp CEEEECCCCBT
T ss_pred CEEEECCCccc
Confidence 99998655443
No 300
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=39.04 E-value=1.4e+02 Score=26.67 Aligned_cols=124 Identities=15% Similarity=0.116 Sum_probs=65.5
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEE-eccccCCCCCCCCc---
Q 016441 24 NHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCIL-HGVDATTMELHPDL--- 98 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~Vl-fgVDATkL~~~~~L--- 98 (389)
++++|+.|=+.. .-+++|+.+ ..+.+|+.+.....+. ...++..++|++.|..+. +.+|.++......+
T Consensus 11 ~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 84 (262)
T 3ksu_A 11 NKVIVIAGGIKN-LGALTAKTFALESVNLVLHYHQAKDS-----DTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF 84 (262)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHTTSSCEEEEEESCGGGH-----HHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEecCccCH-----HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 467888886543 556666655 2356788875543221 123445667777787654 57888876543221
Q ss_pred ---CCCCcceEEEcCCCCCCCCC-----ccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 99 ---RTRKFDRIIFNFPHAGFYGK-----EDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 99 ---k~~~FDrIIFNFPH~G~~gk-----ED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
+..+.|.+|.|==-...... ++-.+.+..|-.-.....+.+.+.++.+|.|...-
T Consensus 85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 11578988877321111111 11122333342223333444555566677776553
No 301
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=39.02 E-value=10 Score=36.59 Aligned_cols=43 Identities=12% Similarity=0.008 Sum_probs=28.3
Q ss_pred HHHHHHhCCCEEEeccccCCCCCCC-Cc-------CCCCcceEEEcCCCCC
Q 016441 72 NLDNLKKLGTCILHGVDATTMELHP-DL-------RTRKFDRIIFNFPHAG 114 (389)
Q Consensus 72 Ni~~Lr~~Gv~VlfgVDATkL~~~~-~L-------k~~~FDrIIFNFPH~G 114 (389)
-.+.|++.|++|+.+..++++.... .+ ....+|.||+--+..+
T Consensus 206 l~~~l~~~GV~i~~~~~v~~v~~~~v~~~~~~~~g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 206 VEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHCCCEEEeCCEEEEEeCCeEEEEecCCCceEEeeeEEEECCCCcc
Confidence 3477899999999887766664421 11 1245899998655544
No 302
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=38.08 E-value=80 Score=29.59 Aligned_cols=100 Identities=15% Similarity=0.134 Sum_probs=56.3
Q ss_pred CCCCCCeEEEEec-CCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccc---cCCCCC
Q 016441 20 HYSSNHQILLVGE-GDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVD---ATTMEL 94 (389)
Q Consensus 20 ~Yss~~rILLVGE-GDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVD---ATkL~~ 94 (389)
....+++||++|- |.. .++..||+..| ..+++|+-.+. +..+..+.++++|+...+..+ ...+.+
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~G--a~vi~~~~~~~--------~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~ 233 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAALG--LRTINVVRDRP--------DIQKLSDRLKSLGAEHVITEEELRRPEMKN 233 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEECCCS--------CHHHHHHHHHHTTCSEEEEHHHHHSGGGGG
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHcC--CEEEEEecCcc--------chHHHHHHHHhcCCcEEEecCcchHHHHHH
Confidence 4567899999997 655 46667788875 45666653221 112344567788986554432 122221
Q ss_pred CCCcCC-CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 95 HPDLRT-RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 95 ~~~Lk~-~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
. ... ..+|.|+ +. +|. + .. ..+.++|+++|.|.+.
T Consensus 234 ~--~~~~~~~Dvvi-d~--~g~---~--------------~~-~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 234 F--FKDMPQPRLAL-NC--VGG---K--------------SS-TELLRQLARGGTMVTY 269 (357)
T ss_dssp T--TSSSCCCSEEE-ES--SCH---H--------------HH-HHHHTTSCTTCEEEEC
T ss_pred H--HhCCCCceEEE-EC--CCc---H--------------HH-HHHHHhhCCCCEEEEE
Confidence 1 111 1488765 32 442 1 01 2356889999987654
No 303
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=36.98 E-value=34 Score=31.72 Aligned_cols=99 Identities=9% Similarity=0.053 Sum_probs=58.4
Q ss_pred cCCCCCCeEEEEec-CChhH-HHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH-HhCCCEEEeccccCCCCCC
Q 016441 19 KHYSSNHQILLVGE-GDFSF-SLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNL-KKLGTCILHGVDATTMELH 95 (389)
Q Consensus 19 ~~Yss~~rILLVGE-GDFSF-SlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~L-r~~Gv~VlfgVDATkL~~~ 95 (389)
....++++||++|= |..-- +..+++..| .+|++|+.+. +.++.+ +++|+...+..+...+.+.
T Consensus 145 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~------------~~~~~~~~~~g~~~~~~~~~~~~~~~ 210 (336)
T 4b7c_A 145 GQPKNGETVVISGAAGAVGSVAGQIARLKG--CRVVGIAGGA------------EKCRFLVEELGFDGAIDYKNEDLAAG 210 (336)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSH------------HHHHHHHHTTCCSEEEETTTSCHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCH------------HHHHHHHHHcCCCEEEECCCHHHHHH
Confidence 34567899999998 66543 334456654 4899987652 234556 7788865544332221110
Q ss_pred -CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 96 -PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 96 -~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
..+..+.+|.|+- .+|. ..+..+..+|+++|.|.+.
T Consensus 211 ~~~~~~~~~d~vi~---~~g~------------------~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 211 LKRECPKGIDVFFD---NVGG------------------EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp HHHHCTTCEEEEEE---SSCH------------------HHHHHHHTTEEEEEEEEEC
T ss_pred HHHhcCCCceEEEE---CCCc------------------chHHHHHHHHhhCCEEEEE
Confidence 0112356897654 2342 1356677889999987653
No 304
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=36.60 E-value=26 Score=32.54 Aligned_cols=98 Identities=18% Similarity=0.138 Sum_probs=57.8
Q ss_pred CCCCCCeEEEEe-cCChhH-HHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC-C
Q 016441 20 HYSSNHQILLVG-EGDFSF-SLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH-P 96 (389)
Q Consensus 20 ~Yss~~rILLVG-EGDFSF-SlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~-~ 96 (389)
...++++||++| -|..-- +..+|+..| .++++|+.+. +.++.++++|+...+..+...+.+. .
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~------------~~~~~~~~~ga~~~~~~~~~~~~~~~~ 210 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKG--AHTIAVASTD------------EKLKIAKEYGAEYLINASKEDILRQVL 210 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSH------------HHHHHHHHTTCSEEEETTTSCHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCH------------HHHHHHHHcCCcEEEeCCCchHHHHHH
Confidence 456789999999 676643 334456654 5899987642 1344567788766544332221110 0
Q ss_pred -CcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 97 -DLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 97 -~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
...+..+|.|+=+ +|. ..+..+..+|+++|.|.+.
T Consensus 211 ~~~~~~g~D~vid~---~g~------------------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 211 KFTNGKGVDASFDS---VGK------------------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp HHTTTSCEEEEEEC---CGG------------------GGHHHHHHHEEEEEEEEEC
T ss_pred HHhCCCCceEEEEC---CCh------------------HHHHHHHHHhccCCEEEEE
Confidence 0123568977643 331 1255677889999987654
No 305
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=36.39 E-value=41 Score=31.39 Aligned_cols=96 Identities=17% Similarity=0.262 Sum_probs=56.2
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCc
Q 016441 20 HYSSNHQILLVGEGDFS-FSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDL 98 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFS-FSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~L 98 (389)
....+++||++|=|..- .+..+|+..| .+|++|+.+. +.++.++++|+...+ |.++-.-...+
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~~~~------------~~~~~~~~lGa~~~~--d~~~~~~~~~~ 224 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMG--LNVVAVDIGD------------EKLELAKELGADLVV--NPLKEDAAKFM 224 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCH------------HHHHHHHHTTCSEEE--CTTTSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCH------------HHHHHHHHCCCCEEe--cCCCccHHHHH
Confidence 35678899999988753 3444566665 4899988652 234456678886543 43321100001
Q ss_pred C--CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 99 R--TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 99 k--~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
. ...+|.||-+ +|. . .-+..+.++|+++|.|.+
T Consensus 225 ~~~~~~~d~vid~---~g~---~--------------~~~~~~~~~l~~~G~~v~ 259 (339)
T 1rjw_A 225 KEKVGGVHAAVVT---AVS---K--------------PAFQSAYNSIRRGGACVL 259 (339)
T ss_dssp HHHHSSEEEEEES---SCC---H--------------HHHHHHHHHEEEEEEEEE
T ss_pred HHHhCCCCEEEEC---CCC---H--------------HHHHHHHHHhhcCCEEEE
Confidence 0 1468988754 342 0 135667778899897654
No 306
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=35.71 E-value=46 Score=29.01 Aligned_cols=79 Identities=18% Similarity=0.235 Sum_probs=45.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccCCCCCCCCc-C
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDATTMELHPDL-R 99 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDATkL~~~~~L-k 99 (389)
++++||+.|=+.+ .-.+|++.+ ..+.+|++++.+.. . .....+.|++.|..+ .+.+|.++......+ +
T Consensus 12 ~~k~vlItGasgg-iG~~la~~l~~~G~~V~~~~r~~~-~-------~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 82 (260)
T 3awd_A 12 DNRVAIVTGGAQN-IGLACVTALAEAGARVIIADLDEA-M-------ATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVR 82 (260)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEeCCHH-H-------HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence 3567999987654 344444433 12568988887632 1 233455666666443 456788775432111 1
Q ss_pred -----CCCcceEEEcC
Q 016441 100 -----TRKFDRIIFNF 110 (389)
Q Consensus 100 -----~~~FDrIIFNF 110 (389)
..+.|.||.|=
T Consensus 83 ~~~~~~~~id~vi~~A 98 (260)
T 3awd_A 83 SVHEQEGRVDILVACA 98 (260)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 14689988773
No 307
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=34.79 E-value=3.1e+02 Score=26.67 Aligned_cols=89 Identities=11% Similarity=0.060 Sum_probs=47.1
Q ss_pred cEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhH
Q 016441 50 NICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHR 129 (389)
Q Consensus 50 nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr 129 (389)
.|++.-.| ..+.+ -|+.|++...-.+..-+..-|+.++... ..||.||.|=|---..|.+. .-.
T Consensus 258 ~v~GvDid--~~al~---~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-----~~fD~Iv~NPPYG~rl~~~~------~l~ 321 (384)
T 3ldg_A 258 DISGFDFD--GRMVE---IARKNAREVGLEDVVKLKQMRLQDFKTN-----KINGVLISNPPYGERLLDDK------AVD 321 (384)
T ss_dssp CEEEEESC--HHHHH---HHHHHHHHTTCTTTEEEEECCGGGCCCC-----CCSCEEEECCCCTTTTSCHH------HHH
T ss_pred eEEEEECC--HHHHH---HHHHHHHHcCCCCceEEEECChHHCCcc-----CCcCEEEECCchhhccCCHH------HHH
Confidence 35555444 33333 3677776543222344566788887532 47999999999654333211 112
Q ss_pred HHHHHHHHhhHhcccCCCeEEEEecCC
Q 016441 130 SLVRDFFRNSSGMLRDGGEVHVSHKTT 156 (389)
Q Consensus 130 ~LL~~FF~SA~~lL~~~GeIHVTLk~g 156 (389)
.|...+.+..+. -++|.+.|-.-+.
T Consensus 322 ~ly~~lg~~lk~--~~g~~~~iit~~~ 346 (384)
T 3ldg_A 322 ILYNEMGETFAP--LKTWSQFILTNDT 346 (384)
T ss_dssp HHHHHHHHHHTT--CTTSEEEEEESCT
T ss_pred HHHHHHHHHHhh--CCCcEEEEEECCH
Confidence 233333332232 2478877765543
No 308
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=34.76 E-value=52 Score=28.82 Aligned_cols=80 Identities=18% Similarity=0.138 Sum_probs=45.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccCCCCCCCCc-C
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDATTMELHPDL-R 99 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDATkL~~~~~L-k 99 (389)
++++||+.|=+.+ .-.+|++.+ ..+.+|++++..+.+.+ ++..++|++.|..+ .+.+|.++......+ +
T Consensus 20 ~~k~vlItGasgg-iG~~la~~l~~~G~~v~~~~r~~~~~~-------~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 91 (274)
T 1ja9_A 20 AGKVALTTGAGRG-IGRGIAIELGRRGASVVVNYGSSSKAA-------EEVVAELKKLGAQGVAIQADISKPSEVVALFD 91 (274)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEcCCchHHH-------HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence 4568999997654 233444333 12468888877554332 23445667667554 466788765432111 1
Q ss_pred -----CCCcceEEEcC
Q 016441 100 -----TRKFDRIIFNF 110 (389)
Q Consensus 100 -----~~~FDrIIFNF 110 (389)
....|.||.|=
T Consensus 92 ~~~~~~~~~d~vi~~A 107 (274)
T 1ja9_A 92 KAVSHFGGLDFVMSNS 107 (274)
T ss_dssp HHHHHHSCEEEEECCC
T ss_pred HHHHHcCCCCEEEECC
Confidence 13688888764
No 309
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=34.71 E-value=58 Score=30.39 Aligned_cols=96 Identities=18% Similarity=0.211 Sum_probs=55.2
Q ss_pred CCCeEEEEecCChh-HHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC-CCc-C
Q 016441 23 SNHQILLVGEGDFS-FSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH-PDL-R 99 (389)
Q Consensus 23 s~~rILLVGEGDFS-FSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~-~~L-k 99 (389)
++++||++|-|..- .+..||+..| ...|+||+.+. +.++.++++|+...+..+..++.+. ..+ .
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~------------~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~ 233 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASG-AYPVIVSEPSD------------FRRELAKKVGADYVINPFEEDVVKEVMDITD 233 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCH------------HHHHHHHHHTCSEEECTTTSCHHHHHHHHTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCH------------HHHHHHHHhCCCEEECCCCcCHHHHHHHHcC
Confidence 78899999987543 3444566664 23799887652 1344556678765443322221110 001 2
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
+..+|.||-+ +|. ...+..+.++|+++|.|.+
T Consensus 234 g~g~D~vid~---~g~-----------------~~~~~~~~~~l~~~G~iv~ 265 (348)
T 2d8a_A 234 GNGVDVFLEF---SGA-----------------PKALEQGLQAVTPAGRVSL 265 (348)
T ss_dssp TSCEEEEEEC---SCC-----------------HHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCEEEEC---CCC-----------------HHHHHHHHHHHhcCCEEEE
Confidence 3468988754 332 0235667788899997754
No 310
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=34.44 E-value=2.6e+02 Score=27.26 Aligned_cols=53 Identities=15% Similarity=0.202 Sum_probs=30.9
Q ss_pred EEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCCcceEEEcCCCC
Q 016441 51 ICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRKFDRIIFNFPHA 113 (389)
Q Consensus 51 LvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~FDrIIFNFPH~ 113 (389)
|++.-.| ..+.+ -|+.|++...-.+..-+..-|+.++.. ...||.||.|-|-.
T Consensus 266 V~GvDid--~~al~---~Ar~Na~~~gl~~~I~~~~~D~~~~~~-----~~~fD~Iv~NPPYg 318 (393)
T 3k0b_A 266 IIGGDID--ARLIE---IAKQNAVEAGLGDLITFRQLQVADFQT-----EDEYGVVVANPPYG 318 (393)
T ss_dssp EEEEESC--HHHHH---HHHHHHHHTTCTTCSEEEECCGGGCCC-----CCCSCEEEECCCCC
T ss_pred EEEEECC--HHHHH---HHHHHHHHcCCCCceEEEECChHhCCC-----CCCCCEEEECCCCc
Confidence 5554444 33333 367777654322223345678887653 24799999999963
No 311
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=33.04 E-value=23 Score=33.74 Aligned_cols=83 Identities=17% Similarity=0.212 Sum_probs=50.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCC-CcCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHP-DLRT 100 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~-~Lk~ 100 (389)
.++.+||=+|=|.=.+|..|++.++ +..|+|.-.| .+..+ .|++|++... ..+++++ -|+..|.... .+..
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d--~~al~---~A~~~~~~~g-~~v~~v~-~d~~~l~~~l~~~g~ 96 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVD--SEVLR---IAEEKLKEFS-DRVSLFK-VSYREADFLLKTLGI 96 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESC--HHHHH---HHHHHTGGGT-TTEEEEE-CCGGGHHHHHHHTTC
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECC--HHHHH---HHHHHHHhcC-CcEEEEE-CCHHHHHHHHHhcCC
Confidence 3567899988888888999998874 4466665444 33333 2555654332 2344444 4676654211 0111
Q ss_pred CCcceEEEcCCC
Q 016441 101 RKFDRIIFNFPH 112 (389)
Q Consensus 101 ~~FDrIIFNFPH 112 (389)
..||.|++|.|.
T Consensus 97 ~~~D~Vl~D~gv 108 (301)
T 1m6y_A 97 EKVDGILMDLGV 108 (301)
T ss_dssp SCEEEEEEECSC
T ss_pred CCCCEEEEcCcc
Confidence 579999999974
No 312
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=32.44 E-value=37 Score=29.67 Aligned_cols=77 Identities=13% Similarity=0.158 Sum_probs=44.7
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccCCCCCCCCc---
Q 016441 24 NHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDATTMELHPDL--- 98 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDATkL~~~~~L--- 98 (389)
+++||+.|=+.+ .-+++++.+ ..+.+|+++..+.. . .++..+++++.|..+ .+.+|.++......+
T Consensus 5 ~k~vlITGas~g-IG~~~a~~l~~~G~~v~~~~r~~~-~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 75 (247)
T 3lyl_A 5 EKVALVTGASRG-IGFEVAHALASKGATVVGTATSQA-S-------AEKFENSMKEKGFKARGLVLNISDIESIQNFFAE 75 (247)
T ss_dssp TCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSHH-H-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHH-H-------HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 567899885543 233444333 12568888887632 1 234456677777544 467788875432211
Q ss_pred ---CCCCcceEEEc
Q 016441 99 ---RTRKFDRIIFN 109 (389)
Q Consensus 99 ---k~~~FDrIIFN 109 (389)
+..+.|.||.|
T Consensus 76 ~~~~~~~id~li~~ 89 (247)
T 3lyl_A 76 IKAENLAIDILVNN 89 (247)
T ss_dssp HHHTTCCCSEEEEC
T ss_pred HHHHcCCCCEEEEC
Confidence 12568988877
No 313
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=32.36 E-value=2.9e+02 Score=26.70 Aligned_cols=85 Identities=18% Similarity=0.169 Sum_probs=44.1
Q ss_pred cEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCCcceEEEcCCCCCCCCCccchHHHHHhH
Q 016441 50 NICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHR 129 (389)
Q Consensus 50 nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr 129 (389)
.|++.-.| ..+.+ -|+.|++...-.+..-+..-|+.++.. ...||.||.|=|-.-..+ ..
T Consensus 259 ~V~GvDid--~~ai~---~Ar~Na~~~gl~~~i~~~~~D~~~l~~-----~~~~D~Iv~NPPyg~rl~----------~~ 318 (385)
T 3ldu_A 259 KIYGYDID--EESID---IARENAEIAGVDEYIEFNVGDATQFKS-----EDEFGFIITNPPYGERLE----------DK 318 (385)
T ss_dssp CEEEEESC--HHHHH---HHHHHHHHHTCGGGEEEEECCGGGCCC-----SCBSCEEEECCCCCCSHH----------HH
T ss_pred eEEEEECC--HHHHH---HHHHHHHHcCCCCceEEEECChhhcCc-----CCCCcEEEECCCCcCccC----------CH
Confidence 45555444 33333 366776654211223345567777643 257999999999543211 11
Q ss_pred HHHHHHHHhhHhccc--CCCeEEEEec
Q 016441 130 SLVRDFFRNSSGMLR--DGGEVHVSHK 154 (389)
Q Consensus 130 ~LL~~FF~SA~~lL~--~~GeIHVTLk 154 (389)
.-+..+++...++|+ ++|.+.|-..
T Consensus 319 ~~l~~ly~~lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 319 DSVKQLYKELGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp HHHHHHHHHHHHHHHTSBSCEEEEEES
T ss_pred HHHHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 223344444444444 3677666543
No 314
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=31.97 E-value=30 Score=35.19 Aligned_cols=99 Identities=21% Similarity=0.200 Sum_probs=61.5
Q ss_pred CCCeEEEEecC-------ChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC
Q 016441 23 SNHQILLVGEG-------DFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH 95 (389)
Q Consensus 23 s~~rILLVGEG-------DFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~ 95 (389)
+..+||=||=| .. .|+.+++.+.....|++.=++... + ....++++ ..-|++++..-
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG-~Sl~la~~~fP~a~V~GVDiSp~m----~----------~~~~rI~f-v~GDa~dlpf~ 279 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGG-GSLRMWKSFFPRGQIYGLDIMDKS----H----------VDELRIRT-IQGDQNDAEFL 279 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCC-HHHHHHHHHCTTCEEEEEESSCCG----G----------GCBTTEEE-EECCTTCHHHH
T ss_pred CCCEEEEEecCCCcCCCCCH-HHHHHHHHhCCCCEEEEEECCHHH----h----------hcCCCcEE-EEecccccchh
Confidence 45689999998 23 466677665345678887666431 1 12234444 34677775321
Q ss_pred CCcC--CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 96 PDLR--TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 96 ~~Lk--~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
..+. ...||.|+.+-=|. .+ + ...+|+.+..+|+|||.+.|.
T Consensus 280 ~~l~~~d~sFDlVisdgsH~----~~--------d---~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 280 DRIARRYGPFDIVIDDGSHI----NA--------H---VRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp HHHHHHHCCEEEEEECSCCC----HH--------H---HHHHHHHHGGGEEEEEEEEEE
T ss_pred hhhhcccCCccEEEECCccc----ch--------h---HHHHHHHHHHhcCCCeEEEEE
Confidence 0011 36899999874332 01 1 347899999999999998885
No 315
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=31.32 E-value=79 Score=28.93 Aligned_cols=90 Identities=18% Similarity=0.240 Sum_probs=55.3
Q ss_pred eEEEEec-CCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCCc
Q 016441 26 QILLVGE-GDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRKF 103 (389)
Q Consensus 26 rILLVGE-GDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~F 103 (389)
+||+.|- |.. .++..||++.| ..++||+-..+ +++.++++|+...+. .++......+....+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G--a~Vi~~~~~~~------------~~~~~~~lGa~~vi~--~~~~~~~~~~~~~~~ 212 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG--YQVAAVSGRES------------THGYLKSLGANRILS--RDEFAESRPLEKQLW 212 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCGG------------GHHHHHHHTCSEEEE--GGGSSCCCSSCCCCE
T ss_pred eEEEECCCcHHHHHHHHHHHHcC--CEEEEEeCCHH------------HHHHHHhcCCCEEEe--cCCHHHHHhhcCCCc
Confidence 4999997 655 45556677765 48999875421 345556678765543 333222233445678
Q ss_pred ceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 104 DRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 104 DrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
|.| |+. +|. ..+..+.++|+++|.|.+.
T Consensus 213 d~v-~d~--~g~------------------~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 213 AGA-IDT--VGD------------------KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp EEE-EES--SCH------------------HHHHHHHHTEEEEEEEEEC
T ss_pred cEE-EEC--CCc------------------HHHHHHHHHHhcCCEEEEE
Confidence 865 553 442 1356677889999988754
No 316
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=31.04 E-value=1.3e+02 Score=26.95 Aligned_cols=78 Identities=14% Similarity=0.146 Sum_probs=45.6
Q ss_pred CCCeEEEEecC-----ChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEeccccCCCCCC
Q 016441 23 SNHQILLVGEG-----DFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG--TCILHGVDATTMELH 95 (389)
Q Consensus 23 s~~rILLVGEG-----DFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G--v~VlfgVDATkL~~~ 95 (389)
+++++|+.|=+ .+..++.|+++ +.+|+.+..+.+ .+ ++-.+.+++.| -...+.+|.++-.+.
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~---Ga~Vvi~~r~~~-~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 73 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQL---GAKLVFTYRKER-SR-------KELEKLLEQLNQPEAHLYQIDVQSDEEV 73 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHT---TCEEEEEESSGG-GH-------HHHHHHHGGGTCSSCEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHC---CCEEEEEECCHH-HH-------HHHHHHHHhcCCCcEEEEEccCCCHHHH
Confidence 46778999843 25555666653 578888887632 11 22334455544 234567888875443
Q ss_pred CCc------CCCCcceEEEcCC
Q 016441 96 PDL------RTRKFDRIIFNFP 111 (389)
Q Consensus 96 ~~L------k~~~FDrIIFNFP 111 (389)
..+ +-.+.|.+|.|--
T Consensus 74 ~~~~~~~~~~~G~iD~lvnnAg 95 (256)
T 4fs3_A 74 INGFEQIGKDVGNIDGVYHSIA 95 (256)
T ss_dssp HHHHHHHHHHHCCCSEEEECCC
T ss_pred HHHHHHHHHHhCCCCEEEeccc
Confidence 211 1267899998843
No 317
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=30.89 E-value=50 Score=31.45 Aligned_cols=99 Identities=20% Similarity=0.289 Sum_probs=57.2
Q ss_pred CCCCCeEEEEecCChh-HHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccc---cCCCCCC-
Q 016441 21 YSSNHQILLVGEGDFS-FSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVD---ATTMELH- 95 (389)
Q Consensus 21 Yss~~rILLVGEGDFS-FSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVD---ATkL~~~- 95 (389)
...+++||++|-|..- ++..||+..| +..|+||+... +.++.++++|+...+..+ ...+.+.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~------------~~~~~~~~lGa~~vi~~~~~~~~~~~~~v 259 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSP------------NRLKLAEEIGADLTLNRRETSVEERRKAI 259 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCH------------HHHHHHHHTTCSEEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCH------------HHHHHHHHcCCcEEEeccccCcchHHHHH
Confidence 4568899999966543 4455567764 24899987542 234566778886554433 1111000
Q ss_pred CCc-CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 96 PDL-RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 96 ~~L-k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
..+ .+..+|.|+=+ +|. . ..+..+.++|+++|.|.+.
T Consensus 260 ~~~~~g~g~Dvvid~---~g~---~--------------~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 260 MDITHGRGADFILEA---TGD---S--------------RALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp HHHTTTSCEEEEEEC---SSC---T--------------THHHHHHHHEEEEEEEEEC
T ss_pred HHHhCCCCCcEEEEC---CCC---H--------------HHHHHHHHHHhcCCEEEEE
Confidence 001 23468987644 332 1 1356677889999987643
No 318
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=30.83 E-value=40 Score=31.24 Aligned_cols=96 Identities=15% Similarity=0.189 Sum_probs=55.1
Q ss_pred CCCCCCeEEEEec-CChhHHHH-HHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCC
Q 016441 20 HYSSNHQILLVGE-GDFSFSLC-LALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPD 97 (389)
Q Consensus 20 ~Yss~~rILLVGE-GDFSFSlS-La~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~ 97 (389)
....+++||+.|= |..--+.+ +++..| .+|++|+.+.+ .++.++++|+.... |.++-.....
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--~~Vi~~~~~~~------------~~~~~~~~g~~~~~--d~~~~~~~~~ 205 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHLG--ATVIGTVSTEE------------KAETARKLGCHHTI--NYSTQDFAEV 205 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHTT--CEEEEEESSHH------------HHHHHHHHTCSEEE--ETTTSCHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCC--CEEEEEeCCHH------------HHHHHHHcCCCEEE--ECCCHHHHHH
Confidence 4457889999994 77655443 455554 58999876531 22334455766544 4332110000
Q ss_pred ----cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 98 ----LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 98 ----Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
.....+|.||-| +|. + .+..+.++|+++|.|.+.
T Consensus 206 i~~~~~~~~~d~vi~~---~g~---~---------------~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 206 VREITGGKGVDVVYDS---IGK---D---------------TLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp HHHHHTTCCEEEEEEC---SCT---T---------------THHHHHHTEEEEEEEEEC
T ss_pred HHHHhCCCCCeEEEEC---CcH---H---------------HHHHHHHhhccCCEEEEE
Confidence 113469988765 342 1 245677889999977543
No 319
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=30.58 E-value=77 Score=25.78 Aligned_cols=77 Identities=13% Similarity=0.168 Sum_probs=43.9
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 24 NHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
..+|+++|=|.+--.++ +.+ ..+..+++...|..+.+ +.+......|+.+++| |+++........-..
T Consensus 3 ~~~vlI~G~G~vG~~la--~~L~~~g~~V~vid~~~~~~~--------~~~~~~~~~~~~~i~g-d~~~~~~l~~a~i~~ 71 (153)
T 1id1_A 3 KDHFIVCGHSILAINTI--LQLNQRGQNVTVISNLPEDDI--------KQLEQRLGDNADVIPG-DSNDSSVLKKAGIDR 71 (153)
T ss_dssp CSCEEEECCSHHHHHHH--HHHHHTTCCEEEEECCCHHHH--------HHHHHHHCTTCEEEES-CTTSHHHHHHHTTTT
T ss_pred CCcEEEECCCHHHHHHH--HHHHHCCCCEEEEECCChHHH--------HHHHHhhcCCCeEEEc-CCCCHHHHHHcChhh
Confidence 46799999887765544 322 12456777766543211 2233344568888875 776543211111256
Q ss_pred cceEEEcCC
Q 016441 103 FDRIIFNFP 111 (389)
Q Consensus 103 FDrIIFNFP 111 (389)
.|.||.--|
T Consensus 72 ad~vi~~~~ 80 (153)
T 1id1_A 72 CRAILALSD 80 (153)
T ss_dssp CSEEEECSS
T ss_pred CCEEEEecC
Confidence 788887654
No 320
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=30.15 E-value=1.2e+02 Score=27.20 Aligned_cols=122 Identities=15% Similarity=0.107 Sum_probs=61.1
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccCCCCCCCCc---
Q 016441 24 NHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDATTMELHPDL--- 98 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDATkL~~~~~L--- 98 (389)
+++||+.|=+.+ .-+++++.+ ..+.+|+++..+..+.+ +...++|++.|..+ .+.+|.++......+
T Consensus 29 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 100 (283)
T 1g0o_A 29 GKVALVTGAGRG-IGREMAMELGRRGCKVIVNYANSTESA-------EEVVAAIKKNGSDAACVKANVGVVEDIVRMFEE 100 (283)
T ss_dssp TCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHH-------HHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHH
Confidence 567888886653 344444443 13568888887764322 22345566666543 456787765432111
Q ss_pred ---CCCCcceEEEcCCCCCCCC-----CccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 99 ---RTRKFDRIIFNFPHAGFYG-----KEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 99 ---k~~~FDrIIFNFPH~G~~g-----kED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
...+.|.||.|==-..... .++-.+.+..|-.=.....+.+.+.|+.+|.|...-
T Consensus 101 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 101 AVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 0146898887732111100 111223333332222233344555555667766543
No 321
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=30.06 E-value=42 Score=31.27 Aligned_cols=95 Identities=17% Similarity=0.272 Sum_probs=55.0
Q ss_pred CCCCCCeEEEEec-CChhH-HHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCC
Q 016441 20 HYSSNHQILLVGE-GDFSF-SLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPD 97 (389)
Q Consensus 20 ~Yss~~rILLVGE-GDFSF-SlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~ 97 (389)
....+++||++|- |..-. +..++++.| .+++||..+.+ .++.++++|+... +|.++-.-...
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G--~~Vi~~~~~~~------------~~~~~~~~ga~~~--~d~~~~~~~~~ 226 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFG--ARVIATAGSED------------KLRRAKALGADET--VNYTHPDWPKE 226 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTT--CEEEEEESSHH------------HHHHHHHHTCSEE--EETTSTTHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHH------------HHHHHHhcCCCEE--EcCCcccHHHH
Confidence 3457889999998 66544 444566664 48999876421 2334455676544 34433110000
Q ss_pred ----cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 98 ----LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 98 ----Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
..+..+|.||-+-. + . .+..+.++|+++|.|.+
T Consensus 227 ~~~~~~~~~~d~vi~~~g--~---~----------------~~~~~~~~l~~~G~~v~ 263 (343)
T 2eih_A 227 VRRLTGGKGADKVVDHTG--A---L----------------YFEGVIKATANGGRIAI 263 (343)
T ss_dssp HHHHTTTTCEEEEEESSC--S---S----------------SHHHHHHHEEEEEEEEE
T ss_pred HHHHhCCCCceEEEECCC--H---H----------------HHHHHHHhhccCCEEEE
Confidence 12357999887643 1 1 14556778899997654
No 322
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=30.04 E-value=99 Score=28.81 Aligned_cols=77 Identities=17% Similarity=0.104 Sum_probs=51.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.++ +||=||=|.=.++..|++.. ..|+|.-.|.. +.+ .+++++. ...++|+++ |+.++.... ..
T Consensus 46 ~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~--~~~---~l~~~~~---~~~v~vi~~-D~l~~~~~~---~~ 109 (271)
T 3fut_A 46 FTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLR--LRP---VLEETLS---GLPVRLVFQ-DALLYPWEE---VP 109 (271)
T ss_dssp CCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGG--GHH---HHHHHTT---TSSEEEEES-CGGGSCGGG---SC
T ss_pred CCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHH--HHH---HHHHhcC---CCCEEEEEC-ChhhCChhh---cc
Confidence 345 99999999999999999862 57998888753 111 1233332 234666654 887764321 13
Q ss_pred CcceEEEcCCCCC
Q 016441 102 KFDRIIFNFPHAG 114 (389)
Q Consensus 102 ~FDrIIFNFPH~G 114 (389)
.||.||-|.|---
T Consensus 110 ~~~~iv~NlPy~i 122 (271)
T 3fut_A 110 QGSLLVANLPYHI 122 (271)
T ss_dssp TTEEEEEEECSSC
T ss_pred CccEEEecCcccc
Confidence 6899999999764
No 323
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=30.03 E-value=1.4e+02 Score=25.43 Aligned_cols=54 Identities=19% Similarity=0.319 Sum_probs=36.0
Q ss_pred eEEEEecCChhHHHHHHHH----hCCCCcEEecccc---CHHHHHHhhhhHHHHHHHH-H-hCCCEEE
Q 016441 26 QILLVGEGDFSFSLCLALA----FGSASNICASSLD---SYDDVIQKYKRAKSNLDNL-K-KLGTCIL 84 (389)
Q Consensus 26 rILLVGEGDFSFSlSLa~~----~gs~~nLvATSlD---SeeeL~~KY~~A~~Ni~~L-r-~~Gv~Vl 84 (389)
.|++++=|+ ||.+|+.. +|...++.|-++. +.+++.+|+. +-++++ . ..|+-|+
T Consensus 5 giii~sHG~--~A~gl~~~~~~i~G~~~~v~av~~~~~~~~~~~~~~i~---~~i~~~~~~~~gvliL 67 (144)
T 3lfh_A 5 FVLIITHGD--FGKGLLSGAEVIIGKQENVHTVGLNLGDNIEVVRKEVE---KIIKEKLQEDKEIIIV 67 (144)
T ss_dssp EEEEEEETT--HHHHHHHHHHHHHCCCSSEEEEEECTTCCHHHHHHHHH---HHHHHHHTTTCEEEEE
T ss_pred eEEEEeCcH--HHHHHHHHHHHHcCCCCcEEEEEccCCCCHHHHHHHHH---HHHHHhhCCCCcEEEE
Confidence 599999997 78888754 3665688877774 5577777654 446666 3 2344444
No 324
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=29.96 E-value=2.4e+02 Score=25.31 Aligned_cols=98 Identities=14% Similarity=0.031 Sum_probs=55.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC----EE-EeccccCCCCC--
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGT----CI-LHGVDATTMEL-- 94 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv----~V-lfgVDATkL~~-- 94 (389)
.+.++||=+|=| +|....-... +..||+.-.| ++..+ .+++|++ +.|. +| ++-.||....+
T Consensus 29 ~~a~~VLEiGtG---ySTl~lA~~~-~g~VvtvE~d--~~~~~---~ar~~l~---~~g~~~~~~I~~~~gda~~~~~wg 96 (202)
T 3cvo_A 29 EEAEVILEYGSG---GSTVVAAELP-GKHVTSVESD--RAWAR---MMKAWLA---ANPPAEGTEVNIVWTDIGPTGDWG 96 (202)
T ss_dssp HHCSEEEEESCS---HHHHHHHTST-TCEEEEEESC--HHHHH---HHHHHHH---HSCCCTTCEEEEEECCCSSBCGGG
T ss_pred hCCCEEEEECch---HHHHHHHHcC-CCEEEEEeCC--HHHHH---HHHHHHH---HcCCCCCCceEEEEeCchhhhccc
Confidence 357799999998 4554432222 3456655554 34433 3566655 4442 22 44467654310
Q ss_pred ----------CC-------Cc-CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEE
Q 016441 95 ----------HP-------DL-RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVH 150 (389)
Q Consensus 95 ----------~~-------~L-k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIH 150 (389)
.. .+ ....||.|.-+ |. + + ..++..|..+|++||.|.
T Consensus 97 ~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfID----g~--k----~---------~~~~~~~l~~l~~GG~Iv 151 (202)
T 3cvo_A 97 HPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVD----GR--F----R---------VGCALATAFSITRPVTLL 151 (202)
T ss_dssp CBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEEC----SS--S----H---------HHHHHHHHHHCSSCEEEE
T ss_pred ccccchhhhhHHHHhhhhhccccCCCCCEEEEe----CC--C----c---------hhHHHHHHHhcCCCeEEE
Confidence 00 11 13679999987 32 1 1 155666789999999883
No 325
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=29.70 E-value=21 Score=35.58 Aligned_cols=64 Identities=16% Similarity=0.301 Sum_probs=35.6
Q ss_pred CCCCCeEEEEecCChhHHHHH-HHHhCCCCcEEeccccCHHHHHHhhhhHHHHHH-HHHhCC---CEEEeccccCCC
Q 016441 21 YSSNHQILLVGEGDFSFSLCL-ALAFGSASNICASSLDSYDDVIQKYKRAKSNLD-NLKKLG---TCILHGVDATTM 92 (389)
Q Consensus 21 Yss~~rILLVGEGDFSFSlSL-a~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~-~Lr~~G---v~VlfgVDATkL 92 (389)
+-.+.|+++.||++..++++- ...+|-..-.++|...+.+ | ++-++ .|++.| +.|+.+.|...|
T Consensus 309 ~l~gkrv~i~~~~~~~~~l~~~L~elG~~vv~v~~~~~~~~-----~---~~~~~~ll~~~~~~~~~v~~~~d~~~l 377 (458)
T 1mio_B 309 YLQGKKVALLGDPDEIIALSKFIIELGAIPKYVVTGTPGMK-----F---QKEIDAMLAEAGIEGSKVKVEGDFFDV 377 (458)
T ss_dssp HHTTCEEEEEECHHHHHHHHHHHHTTTCEEEEEEESSCCHH-----H---HHHHHHHHHTTTCCSCEEEESCBHHHH
T ss_pred HcCCCEEEEEcCchHHHHHHHHHHHCCCEEEEEEeCCCCHH-----H---HHHHHHHHHhcCCCCCEEEECCCHHHH
Confidence 346889999999987777653 2445432222334443322 2 12222 344433 578888776655
No 326
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=29.24 E-value=24 Score=32.98 Aligned_cols=72 Identities=14% Similarity=0.222 Sum_probs=41.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhC-CCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFG-SASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~g-s~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
.+.++|+++|-|.+. ..+++.+. .+. +++...|. +.++ +++.|+.+++| |+++...-....-
T Consensus 113 ~~~~~viI~G~G~~g--~~l~~~L~~~g~-v~vid~~~------------~~~~-~~~~~~~~i~g-d~~~~~~L~~a~i 175 (336)
T 1lnq_A 113 AKSRHVVICGWSEST--LECLRELRGSEV-FVLAEDEN------------VRKK-VLRSGANFVHG-DPTRVSDLEKANV 175 (336)
T ss_dssp ---CEEEEESCCHHH--HHHHTTGGGSCE-EEEESCGG------------GHHH-HHHTTCEEEES-CTTSHHHHHHTCS
T ss_pred cccCCEEEECCcHHH--HHHHHHHHhCCc-EEEEeCCh------------hhhh-HHhCCcEEEEe-CCCCHHHHHhcCh
Confidence 346689999998765 55666552 233 55443332 1334 56689999887 8886542211223
Q ss_pred CCcceEEEcC
Q 016441 101 RKFDRIIFNF 110 (389)
Q Consensus 101 ~~FDrIIFNF 110 (389)
...|.||---
T Consensus 176 ~~a~~vi~~~ 185 (336)
T 1lnq_A 176 RGARAVIVDL 185 (336)
T ss_dssp TTEEEEEECC
T ss_pred hhccEEEEcC
Confidence 5678888643
No 327
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=29.11 E-value=1.3e+02 Score=26.69 Aligned_cols=80 Identities=16% Similarity=0.251 Sum_probs=46.2
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeccccCCCCCCCCc--
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTC-ILHGVDATTMELHPDL-- 98 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~-VlfgVDATkL~~~~~L-- 98 (389)
+++++|+.|=+.+ .-+++|+.+ ..+.+|+.++..+.+. .+...++|++.|.. ..+.+|.++......+
T Consensus 7 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 78 (259)
T 3edm_A 7 TNRTIVVAGAGRD-IGRACAIRFAQEGANVVLTYNGAAEG-------AATAVAEIEKLGRSALAIKADLTNAAEVEAAIS 78 (259)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECSSCHH-------HHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHH-------HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 3567999996653 344444433 1256788874444332 23455677777654 4467888875533211
Q ss_pred ----CCCCcceEEEcC
Q 016441 99 ----RTRKFDRIIFNF 110 (389)
Q Consensus 99 ----k~~~FDrIIFNF 110 (389)
+..+.|.+|.|=
T Consensus 79 ~~~~~~g~id~lv~nA 94 (259)
T 3edm_A 79 AAADKFGEIHGLVHVA 94 (259)
T ss_dssp HHHHHHCSEEEEEECC
T ss_pred HHHHHhCCCCEEEECC
Confidence 114789888774
No 328
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=29.10 E-value=34 Score=29.96 Aligned_cols=79 Identities=15% Similarity=0.187 Sum_probs=45.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccCCCCCCCCc--
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDATTMELHPDL-- 98 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDATkL~~~~~L-- 98 (389)
+++++|+.|=+. -.-.+||+.+ ..+.+|+++..+.. . .++..++|++.+..+ .+.+|.++......+
T Consensus 8 ~~k~vlITGas~-giG~~~a~~l~~~G~~V~~~~r~~~-~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (253)
T 3qiv_A 8 ENKVGIVTGSGG-GIGQAYAEALAREGAAVVVADINAE-A-------AEAVAKQIVADGGTAISVAVDVSDPESAKAMAD 78 (253)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEcCCHH-H-------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 356789998554 2344444433 13568888877532 1 234456666766544 467788876532211
Q ss_pred ----CCCCcceEEEcC
Q 016441 99 ----RTRKFDRIIFNF 110 (389)
Q Consensus 99 ----k~~~FDrIIFNF 110 (389)
...+.|.||.|=
T Consensus 79 ~~~~~~g~id~li~~A 94 (253)
T 3qiv_A 79 RTLAEFGGIDYLVNNA 94 (253)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 114789988873
No 329
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=29.02 E-value=14 Score=35.75 Aligned_cols=43 Identities=14% Similarity=0.009 Sum_probs=27.1
Q ss_pred HHHHHHhCCCEEEeccccCCCCCCC-Cc------------CCCCcceEEEcCCCCC
Q 016441 72 NLDNLKKLGTCILHGVDATTMELHP-DL------------RTRKFDRIIFNFPHAG 114 (389)
Q Consensus 72 Ni~~Lr~~Gv~VlfgVDATkL~~~~-~L------------k~~~FDrIIFNFPH~G 114 (389)
-.+.|++.|++|+.+...+++.... .+ ....+|.|++=-|..|
T Consensus 214 ~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~ 269 (437)
T 3sx6_A 214 LTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKG 269 (437)
T ss_dssp HHHHHHHTTCEEECSEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEEC
T ss_pred HHHHHHHCCCEEEcCCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcC
Confidence 3477899999999876555543321 00 1235888888655555
No 330
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=28.67 E-value=43 Score=31.54 Aligned_cols=98 Identities=11% Similarity=0.071 Sum_probs=54.9
Q ss_pred CCCCCCeEEEEe-cCChhHHHH-HHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC-C
Q 016441 20 HYSSNHQILLVG-EGDFSFSLC-LALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH-P 96 (389)
Q Consensus 20 ~Yss~~rILLVG-EGDFSFSlS-La~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~-~ 96 (389)
....+++||++| -|..-.+.+ +++..| .++++|+.+. + .++.++++|+......+...+.+. .
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--a~Vi~~~~~~-~-----------~~~~~~~~g~~~~~~~~~~~~~~~~~ 224 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMAG--AIPLVTAGSQ-K-----------KLQMAEKLGAAAGFNYKKEDFSEATL 224 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESCH-H-----------HHHHHHHHTCSEEEETTTSCHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHcC--CEEEEEeCCH-H-----------HHHHHHHcCCcEEEecCChHHHHHHH
Confidence 456788999999 676654443 345554 5799987652 1 223345567765443332111000 0
Q ss_pred -CcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 97 -DLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 97 -~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
......+|.||-|- |. + -+..+..+|+++|.|.+.
T Consensus 225 ~~~~~~~~d~vi~~~---G~---~---------------~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 225 KFTKGAGVNLILDCI---GG---S---------------YWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp HHTTTSCEEEEEESS---CG---G---------------GHHHHHHHEEEEEEEEEC
T ss_pred HHhcCCCceEEEECC---Cc---h---------------HHHHHHHhccCCCEEEEE
Confidence 01234699887663 42 1 145567788999987653
No 331
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=28.61 E-value=55 Score=30.59 Aligned_cols=100 Identities=15% Similarity=0.194 Sum_probs=59.7
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC-CC
Q 016441 20 HYSSNHQILLVGEGDFS-FSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH-PD 97 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFS-FSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~-~~ 97 (389)
...++++||++|-|..- ++..||++.| ...|+||+-+. +.++.++++|+...+..+...+.+. ..
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~------------~~~~~~~~lGa~~vi~~~~~~~~~~v~~ 229 (352)
T 3fpc_A 163 NIKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRK------------HCCDIALEYGATDIINYKNGDIVEQILK 229 (352)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCH------------HHHHHHHHHTCCEEECGGGSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCH------------HHHHHHHHhCCceEEcCCCcCHHHHHHH
Confidence 44678999999987643 4455567664 34788886542 2455667788876654433322111 00
Q ss_pred -cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 98 -LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 98 -Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
..++.+|.|+ + .+|. . ..+..+.++|+++|.+.+.
T Consensus 230 ~t~g~g~D~v~-d--~~g~---~--------------~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 230 ATDGKGVDKVV-I--AGGD---V--------------HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp HTTTCCEEEEE-E--CSSC---T--------------THHHHHHHHEEEEEEEEEC
T ss_pred HcCCCCCCEEE-E--CCCC---h--------------HHHHHHHHHHhcCCEEEEe
Confidence 1235699876 3 2342 1 2356677889999987643
No 332
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=28.54 E-value=23 Score=32.38 Aligned_cols=91 Identities=16% Similarity=0.175 Sum_probs=54.3
Q ss_pred CCCCCeEEEEec-CChh-HHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEecccc-CCCCCCCC
Q 016441 21 YSSNHQILLVGE-GDFS-FSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDA-TTMELHPD 97 (389)
Q Consensus 21 Yss~~rILLVGE-GDFS-FSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDA-TkL~~~~~ 97 (389)
..++++||++|= |..- ++..+|+..| .++++|+.+.+ .++.++++|+......+. ..+.+.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G--a~Vi~~~~~~~------------~~~~~~~~ga~~~~~~~~~~~~~~~-- 186 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG--LRVLAAASRPE------------KLALPLALGAEEAATYAEVPERAKA-- 186 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSGG------------GSHHHHHTTCSEEEEGGGHHHHHHH--
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHH------------HHHHHHhcCCCEEEECCcchhHHHH--
Confidence 457899999997 6553 4555667765 48999887432 223455678765543322 111111
Q ss_pred cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 98 LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 98 Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
+ ..+|.|+ | +|. + .+..+.++|+++|.|.+
T Consensus 187 ~--~~~d~vi-d---~g~---~---------------~~~~~~~~l~~~G~~v~ 216 (302)
T 1iz0_A 187 W--GGLDLVL-E---VRG---K---------------EVEESLGLLAHGGRLVY 216 (302)
T ss_dssp T--TSEEEEE-E---CSC---T---------------THHHHHTTEEEEEEEEE
T ss_pred h--cCceEEE-E---CCH---H---------------HHHHHHHhhccCCEEEE
Confidence 1 4688765 4 453 1 14567788999997754
No 333
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=28.41 E-value=90 Score=28.60 Aligned_cols=85 Identities=15% Similarity=-0.015 Sum_probs=47.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCH--HHHHHhhhhHHHHHHHHHhCC-CEEEeccccCCCCCCCCc
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSY--DDVIQKYKRAKSNLDNLKKLG-TCILHGVDATTMELHPDL 98 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSe--eeL~~KY~~A~~Ni~~Lr~~G-v~VlfgVDATkL~~~~~L 98 (389)
..+.+||=+|=|.=.+|..||+. + ..|+|.-.+.. +-+......++.|++...-.+ ++++ .-|+..+-. .+
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~-g--~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~-~~d~~~~l~--~~ 155 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASL-G--LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLH-FGNAAEQMP--AL 155 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHT-T--CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEE-ESCHHHHHH--HH
T ss_pred CCcCeEEEeeCccCHHHHHHHHh-C--CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEE-ECCHHHHHH--hh
Confidence 45678998888888888888875 3 46776665541 111111223555554433223 4444 346655311 12
Q ss_pred CC--CCcceEEEcCCC
Q 016441 99 RT--RKFDRIIFNFPH 112 (389)
Q Consensus 99 k~--~~FDrIIFNFPH 112 (389)
.. ..||.|++|-|.
T Consensus 156 ~~~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 156 VKTQGKPDIVYLDPMY 171 (258)
T ss_dssp HHHHCCCSEEEECCCC
T ss_pred hccCCCccEEEECCCC
Confidence 22 579999998544
No 334
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=28.34 E-value=66 Score=30.19 Aligned_cols=93 Identities=17% Similarity=0.243 Sum_probs=59.1
Q ss_pred CeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCCcc
Q 016441 25 HQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRKFD 104 (389)
Q Consensus 25 ~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~FD 104 (389)
++||++||..=.++.+|+. ....++..++.+...+. .|+ |..|.++.+.... ....||
T Consensus 21 ~~~l~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~-------~~~------~~~~~~~~~~~~~------~~~~~~ 78 (343)
T 2pjd_A 21 SRILFAGDLQDDLPARLDT---AASRAHTQQFHHWQVLS-------RQM------GDNARFSLVATAD------DVADCD 78 (343)
T ss_dssp CEEEEEECCCSSHHHHSCC---SEEEEEESBHHHHHHHH-------HHH------GGGEEECSSCCHH------HHTTCS
T ss_pred CeEEEEcCCCChhhhhhhh---CCCEEEECCHHHHHHHH-------hhc------CCceEeccCCCcc------ccCCCC
Confidence 5899999998777777652 12334444444333332 122 7778877654321 113589
Q ss_pred eEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEec
Q 016441 105 RIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHK 154 (389)
Q Consensus 105 rIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk 154 (389)
.|+.-.|-. +.++..-+..+...+.++++|.+.=.
T Consensus 79 ~~~~~~pk~---------------~~~~~~~l~~~~~~~~~~~~~~~~g~ 113 (343)
T 2pjd_A 79 TLIYYWPKN---------------KPEAQFQLMNLLSLLPVGTDIFVVGE 113 (343)
T ss_dssp EEEEECCSS---------------HHHHHHHHHHHHTTSCTTCEEEEEEE
T ss_pred EEEEECCCC---------------hHHHHHHHHHHHHhCCCCCEEEEEEe
Confidence 999988843 33555667778889999999987653
No 335
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=27.99 E-value=48 Score=29.53 Aligned_cols=79 Identities=14% Similarity=0.218 Sum_probs=46.6
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEeccccCCC-CCCCCc
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLG--TCILHGVDATTM-ELHPDL 98 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~G--v~VlfgVDATkL-~~~~~L 98 (389)
++++||+.|=+.+ .-+++|+.+ ..+.+|++++.+.. ..++.+++|++.+ -...+.+|.++. .....+
T Consensus 11 ~~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~--------~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~ 81 (311)
T 3o26_A 11 KRRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVT--------KGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSL 81 (311)
T ss_dssp -CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHH--------HHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHH
T ss_pred CCcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHH--------HHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHH
Confidence 4567899986543 333444333 13568999988742 1344566777665 345678899886 322111
Q ss_pred ------CCCCcceEEEcC
Q 016441 99 ------RTRKFDRIIFNF 110 (389)
Q Consensus 99 ------k~~~FDrIIFNF 110 (389)
...+.|.||.|=
T Consensus 82 ~~~~~~~~g~iD~lv~nA 99 (311)
T 3o26_A 82 ADFIKTHFGKLDILVNNA 99 (311)
T ss_dssp HHHHHHHHSSCCEEEECC
T ss_pred HHHHHHhCCCCCEEEECC
Confidence 125789888873
No 336
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=27.86 E-value=1.1e+02 Score=29.08 Aligned_cols=110 Identities=14% Similarity=0.174 Sum_probs=60.0
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCC-CCC
Q 016441 20 HYSSNHQILLVGEGDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMEL-HPD 97 (389)
Q Consensus 20 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~-~~~ 97 (389)
....+++||++|=|.. .++..||++.| ...|+||+.+. +.++.++++|+.+ ||.++-.. ...
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~------------~~~~~a~~lGa~~---i~~~~~~~~~~~ 245 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNP------------ERLKLLSDAGFET---IDLRNSAPLRDQ 245 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCH------------HHHHHHHTTTCEE---EETTSSSCHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCH------------HHHHHHHHcCCcE---EcCCCcchHHHH
Confidence 3567899999997764 56777788876 34799987542 2455678889863 34332110 001
Q ss_pred c----CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 98 L----RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 98 L----k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
+ .+..+|.|+-. +|......... + .+. --..-+..+.++|+++|.|.+
T Consensus 246 ~~~~~~g~g~Dvvid~---~g~~~~~~~~~-~-~~~-~~~~~~~~~~~~l~~gG~iv~ 297 (398)
T 2dph_A 246 IDQILGKPEVDCGVDA---VGFEAHGLGDE-A-NTE-TPNGALNSLFDVVRAGGAIGI 297 (398)
T ss_dssp HHHHHSSSCEEEEEEC---SCTTCBCSGGG-T-TSB-CTTHHHHHHHHHEEEEEEEEC
T ss_pred HHHHhCCCCCCEEEEC---CCCcccccccc-c-ccc-ccHHHHHHHHHHHhcCCEEEE
Confidence 1 13469988654 33210000000 0 000 000135667788999998753
No 337
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=27.51 E-value=98 Score=29.09 Aligned_cols=93 Identities=18% Similarity=0.220 Sum_probs=54.7
Q ss_pred CCeEEEEecCChh-HHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcC--C
Q 016441 24 NHQILLVGEGDFS-FSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLR--T 100 (389)
Q Consensus 24 ~~rILLVGEGDFS-FSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk--~ 100 (389)
+++||++|=|..- ++..||+..| .+|+||+.+..+ .+.++.++++|+... | ++ .-...+. .
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~G--a~Vi~~~~~~~~---------~~~~~~~~~~ga~~v---~-~~-~~~~~~~~~~ 244 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYG--LEVWMANRREPT---------EVEQTVIEETKTNYY---N-SS-NGYDKLKDSV 244 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHT--CEEEEEESSCCC---------HHHHHHHHHHTCEEE---E-CT-TCSHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCccc---------hHHHHHHHHhCCcee---c-hH-HHHHHHHHhC
Confidence 7899999976643 3444566665 489999876410 123345666788765 4 33 1111111 1
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHH-HhhHhcccCCCeEEEE
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFF-RNSSGMLRDGGEVHVS 152 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF-~SA~~lL~~~GeIHVT 152 (389)
..+|.||-+- |. . ..+ +.+.++|+++|.|.+.
T Consensus 245 ~~~d~vid~~---g~---~--------------~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 245 GKFDVIIDAT---GA---D--------------VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp CCEEEEEECC---CC---C--------------THHHHHHGGGEEEEEEEEEC
T ss_pred CCCCEEEECC---CC---h--------------HHHHHHHHHHHhcCCEEEEE
Confidence 5689887653 32 1 023 6677888999977543
No 338
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=27.46 E-value=61 Score=26.89 Aligned_cols=56 Identities=21% Similarity=0.277 Sum_probs=35.8
Q ss_pred eEEEEecCChhHHHHHHHH----hCCCCcEEecccc---CHHHHHHhhhhHHHHHHHHHh-CCCEEEec
Q 016441 26 QILLVGEGDFSFSLCLALA----FGSASNICASSLD---SYDDVIQKYKRAKSNLDNLKK-LGTCILHG 86 (389)
Q Consensus 26 rILLVGEGDFSFSlSLa~~----~gs~~nLvATSlD---SeeeL~~KY~~A~~Ni~~Lr~-~Gv~Vlfg 86 (389)
.|++|+=|+ ||.+|+.. +|...++.|-++. +.+++.+|.. +-++++.+ .|+-|+-+
T Consensus 3 ~iii~sHG~--~A~gl~~~~~~i~G~~~~v~ai~~~~~~~~~~~~~~i~---~~i~~~~~~~gvliLtD 66 (135)
T 1pdo_A 3 AIVIGTHGW--AAEQLLKTAEMLLGEQENVGWIDFVPGENAETLIEKYN---AQLAKLDTTKGVLFLVD 66 (135)
T ss_dssp EEEEECSBT--HHHHHHHHHHHHHCCCSSEEEECBCTTCCHHHHHHHHH---HHHTTSCCTTCEEEEES
T ss_pred eEEEEeChH--HHHHHHHHHHHHcCCcCCEEEEEeeCCCCHHHHHHHHH---HHHHhcCCCCCEEEEEE
Confidence 589999997 88888754 3655788887775 4556666543 33444432 35555543
No 339
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=27.44 E-value=38 Score=31.89 Aligned_cols=98 Identities=16% Similarity=0.230 Sum_probs=56.7
Q ss_pred CCCCCCeEEEE-ecCChhHHHH-HHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC-C
Q 016441 20 HYSSNHQILLV-GEGDFSFSLC-LALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH-P 96 (389)
Q Consensus 20 ~Yss~~rILLV-GEGDFSFSlS-La~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~-~ 96 (389)
...++++||+. |-|..--+.+ +|+..| .+|+||+.+. +.++.++++|+......+...+.+. .
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~G--a~Vi~~~~~~------------~~~~~~~~lGa~~~~~~~~~~~~~~~~ 229 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAFG--AEVYATAGST------------GKCEACERLGAKRGINYRSEDFAAVIK 229 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSH------------HHHHHHHHHTCSEEEETTTSCHHHHHH
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCH------------HHHHHHHhcCCCEEEeCCchHHHHHHH
Confidence 44678899999 5676654443 456654 4799998652 2344556678765543332221110 0
Q ss_pred CcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 97 DLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 97 ~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
.+....+|.|+=+ +|. + .+..+..+|+++|.|.+.
T Consensus 230 ~~~~~g~Dvvid~---~g~---~---------------~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 230 AETGQGVDIILDM---IGA---A---------------YFERNIASLAKDGCLSII 264 (353)
T ss_dssp HHHSSCEEEEEES---CCG---G---------------GHHHHHHTEEEEEEEEEC
T ss_pred HHhCCCceEEEEC---CCH---H---------------HHHHHHHHhccCCEEEEE
Confidence 0114578977653 342 1 245677889999987654
No 340
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=26.94 E-value=78 Score=29.11 Aligned_cols=93 Identities=18% Similarity=0.247 Sum_probs=53.4
Q ss_pred CCCC-eEEEEec-CChh-HHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCC-C-CC
Q 016441 22 SSNH-QILLVGE-GDFS-FSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTME-L-HP 96 (389)
Q Consensus 22 ss~~-rILLVGE-GDFS-FSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~-~-~~ 96 (389)
..++ +||++|- |..- ++..||++.| ..+++|+-..+ .++.++++|+..... .++.. . ..
T Consensus 147 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~------------~~~~~~~lGa~~~i~--~~~~~~~~~~ 210 (328)
T 1xa0_A 147 TPERGPVLVTGATGGVGSLAVSMLAKRG--YTVEASTGKAA------------EHDYLRVLGAKEVLA--REDVMAERIR 210 (328)
T ss_dssp CGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCTT------------CHHHHHHTTCSEEEE--CC--------
T ss_pred CCCCceEEEecCCCHHHHHHHHHHHHCC--CEEEEEECCHH------------HHHHHHHcCCcEEEe--cCCcHHHHHH
Confidence 3444 8999997 7654 4555677775 46888876531 234556788765543 32221 1 11
Q ss_pred CcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 97 DLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 97 ~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
.+....+|.|+-+ +|. + -+..+.++|+++|.|.+
T Consensus 211 ~~~~~~~d~vid~---~g~---~---------------~~~~~~~~l~~~G~~v~ 244 (328)
T 1xa0_A 211 PLDKQRWAAAVDP---VGG---R---------------TLATVLSRMRYGGAVAV 244 (328)
T ss_dssp -CCSCCEEEEEEC---STT---T---------------THHHHHHTEEEEEEEEE
T ss_pred HhcCCcccEEEEC---CcH---H---------------HHHHHHHhhccCCEEEE
Confidence 2234568977654 442 1 14557778999998764
No 341
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=26.73 E-value=1.4e+02 Score=27.56 Aligned_cols=101 Identities=17% Similarity=0.245 Sum_probs=57.5
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC-CC
Q 016441 20 HYSSNHQILLVGEGDFS-FSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH-PD 97 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFS-FSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~-~~ 97 (389)
.-.++++||+.|=|.-- ++..+|++.| ...+++++-. .+.++.++++|+...+..+-....+. ..
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~------------~~k~~~a~~lGa~~~i~~~~~~~~~~~~~ 223 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDIS------------SEKLALAKSFGAMQTFNSSEMSAPQMQSV 223 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESC------------HHHHHHHHHTTCSEEEETTTSCHHHHHHH
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEech------------HHHHHHHHHcCCeEEEeCCCCCHHHHHHh
Confidence 34578899999987654 4445567776 3455665433 22456678889876654332221110 01
Q ss_pred cC-CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 98 LR-TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 98 Lk-~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
+. ...+|.| ++. +|. . ..+..|.++|+++|.|.+.-
T Consensus 224 ~~~~~g~d~v-~d~--~G~---~--------------~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 224 LRELRFNQLI-LET--AGV---P--------------QTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp HGGGCSSEEE-EEC--SCS---H--------------HHHHHHHHHCCTTCEEEECC
T ss_pred hcccCCcccc-ccc--ccc---c--------------chhhhhhheecCCeEEEEEe
Confidence 12 2345554 443 442 1 34566788999999887643
No 342
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=26.45 E-value=76 Score=29.22 Aligned_cols=95 Identities=15% Similarity=0.238 Sum_probs=54.8
Q ss_pred CCCCCCeEEEEec-CChhHHH-HHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC--
Q 016441 20 HYSSNHQILLVGE-GDFSFSL-CLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH-- 95 (389)
Q Consensus 20 ~Yss~~rILLVGE-GDFSFSl-SLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~-- 95 (389)
....+++||++|= |..-.+. .+++..| .+|++|+.+. + .++.++++|+.... |.++....
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~-~-----------~~~~~~~~g~~~~~--d~~~~~~~~~ 205 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLKG--CKVVGAAGSD-E-----------KIAYLKQIGFDAAF--NYKTVNSLEE 205 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHTT--CEEEEEESSH-H-----------HHHHHHHTTCSEEE--ETTSCSCHHH
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHCC--CEEEEEeCCH-H-----------HHHHHHhcCCcEEE--ecCCHHHHHH
Confidence 4567889999997 6554433 3345554 4899887642 1 23344566875443 44432110
Q ss_pred --CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 96 --PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 96 --~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
..+....+|.||-|- |. ..+..+.++|+++|.|.+
T Consensus 206 ~~~~~~~~~~d~vi~~~---g~------------------~~~~~~~~~l~~~G~~v~ 242 (333)
T 1v3u_A 206 ALKKASPDGYDCYFDNV---GG------------------EFLNTVLSQMKDFGKIAI 242 (333)
T ss_dssp HHHHHCTTCEEEEEESS---CH------------------HHHHHHHTTEEEEEEEEE
T ss_pred HHHHHhCCCCeEEEECC---Ch------------------HHHHHHHHHHhcCCEEEE
Confidence 001124699887653 31 124667788999998754
No 343
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=26.44 E-value=1.5 Score=39.46 Aligned_cols=108 Identities=14% Similarity=0.149 Sum_probs=63.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.++++||=+|=|.=.++..|++.. ..++|.-.|... . ..+++|++ ...+++++ .-|+.++... ...
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~--~---~~a~~~~~--~~~~v~~~-~~D~~~~~~~---~~~ 93 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHL--F---NLSSEKLK--LNTRVTLI-HQDILQFQFP---NKQ 93 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSS--S---SSSSCTTT--TCSEEEEC-CSCCTTTTCC---CSS
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHH--H---HHHHHHhc--cCCceEEE-ECChhhcCcc---cCC
Confidence 456789999988888888888763 578887777431 1 11223332 11234444 4488776421 135
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHH------HHH----HhhHhcccCCCeEEEEe
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVR------DFF----RNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~------~FF----~SA~~lL~~~GeIHVTL 153 (389)
.| .||.|.|.-.. .. + -..++. .+| +.|..+|+++|.+.|..
T Consensus 94 ~f-~vv~n~Py~~~---~~----~--~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 94 RY-KIVGNIPYHLS---TQ----I--IKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp EE-EEEEECCSSSC---HH----H--HHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred Cc-EEEEeCCcccc---HH----H--HHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 78 89999998753 11 1 112221 223 55777888887765543
No 344
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=26.27 E-value=1.3e+02 Score=26.15 Aligned_cols=79 Identities=20% Similarity=0.245 Sum_probs=44.7
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccCCCCCCCCc-C-
Q 016441 24 NHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDATTMELHPDL-R- 99 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDATkL~~~~~L-k- 99 (389)
+++||+.|=..+ .-.++++.+ ..+.+|++++..+.+.+ ++..++|++.|..+ .+.+|.++......+ +
T Consensus 7 ~k~vlITGasgg-iG~~~a~~l~~~G~~V~~~~r~~~~~~-------~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 78 (261)
T 1gee_A 7 GKVVVITGSSTG-LGKSMAIRFATEKAKVVVNYRSKEDEA-------NSVLEEIKKVGGEAIAVKGDVTVESDVINLVQS 78 (261)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEcCCChHHH-------HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 567999986553 234444333 12467888887444322 23445566666554 467788875432111 1
Q ss_pred ----CCCcceEEEcC
Q 016441 100 ----TRKFDRIIFNF 110 (389)
Q Consensus 100 ----~~~FDrIIFNF 110 (389)
....|.||.|=
T Consensus 79 ~~~~~g~id~li~~A 93 (261)
T 1gee_A 79 AIKEFGKLDVMINNA 93 (261)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 13689988873
No 345
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=26.20 E-value=50 Score=28.86 Aligned_cols=44 Identities=16% Similarity=0.296 Sum_probs=29.1
Q ss_pred CCCCC-eEEEEecCChhHHHHHHHH----hCCCCcEEeccc--cCHHHHHHhh
Q 016441 21 YSSNH-QILLVGEGDFSFSLCLALA----FGSASNICASSL--DSYDDVIQKY 66 (389)
Q Consensus 21 Yss~~-rILLVGEGDFSFSlSLa~~----~gs~~nLvATSl--DSeeeL~~KY 66 (389)
|.... .|++++=|+ ||.+|+.. +|...++.|-++ |+.+++.+|+
T Consensus 17 ~~~~~~~iII~sHG~--~A~gl~~s~~~i~G~~~~v~av~~~~~~~~~~~~~~ 67 (159)
T 3mtq_A 17 FQGMKRHYIFASHGS--FANGLLNSVELILGKQPDIHTLCAYVEEEVDLTQQV 67 (159)
T ss_dssp CSSCCEEEEEEEETT--HHHHHHHHHHHHHCCCTTEEEEEETSCSSSCHHHHH
T ss_pred hhccCceEEEEeCcH--HHHHHHHHHHHHcCCCCCeEEEECCCCCHHHHHHHH
Confidence 44444 499999998 78888754 365567777664 4444666654
No 346
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=26.12 E-value=2.2e+02 Score=25.23 Aligned_cols=79 Identities=15% Similarity=0.191 Sum_probs=47.0
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccCCCCCCCCc--
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDATTMELHPDL-- 98 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDATkL~~~~~L-- 98 (389)
+++++|+.|=+.+ .-+++|+.+ ..+.+|++++.+. +. .++..++|++.|..+ .+.+|.++......+
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~-~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 80 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTV-ER-------LEDVAKQVTDTGRRALSVGTDITDDAQVAHLVD 80 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCH-HH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCH-HH-------HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 4678999997653 333444333 1256788887753 22 334556677777544 467788876543211
Q ss_pred ----CCCCcceEEEcC
Q 016441 99 ----RTRKFDRIIFNF 110 (389)
Q Consensus 99 ----k~~~FDrIIFNF 110 (389)
+..+.|.+|.|=
T Consensus 81 ~~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 81 ETMKAYGRVDVVINNA 96 (264)
T ss_dssp HHHHHTSCCSEEEECC
T ss_pred HHHHHcCCCcEEEECC
Confidence 125789999884
No 347
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=26.08 E-value=73 Score=28.26 Aligned_cols=75 Identities=15% Similarity=0.280 Sum_probs=41.0
Q ss_pred CCeEEEEecC---Ch--hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCCCCC
Q 016441 24 NHQILLVGEG---DF--SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMELHPD 97 (389)
Q Consensus 24 ~~rILLVGEG---DF--SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~~~~ 97 (389)
+++||+.|=+ .. ..++.|++ .+.+|++++.+. .+ ++.+++|++ .|....+.+|.++......
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~---~G~~V~~~~r~~--~~-------~~~~~~l~~~~~~~~~~~~D~~~~~~v~~ 76 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHR---EGAELAFTYQND--KL-------KGRVEEFAAQLGSDIVLQCDVAEDASIDT 76 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHH---TTCEEEEEESST--TT-------HHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHH---CCCEEEEEcCcH--HH-------HHHHHHHHHhcCCcEEEEccCCCHHHHHH
Confidence 5679999964 33 33333443 256788887764 11 223344433 2333566788887543211
Q ss_pred c------CCCCcceEEEcC
Q 016441 98 L------RTRKFDRIIFNF 110 (389)
Q Consensus 98 L------k~~~FDrIIFNF 110 (389)
+ +..+.|.||.|=
T Consensus 77 ~~~~~~~~~g~iD~lv~~A 95 (265)
T 1qsg_A 77 MFAELGKVWPKFDGFVHSI 95 (265)
T ss_dssp HHHHHHTTCSSEEEEEECC
T ss_pred HHHHHHHHcCCCCEEEECC
Confidence 1 124689888774
No 348
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=25.97 E-value=2.3e+02 Score=25.28 Aligned_cols=77 Identities=18% Similarity=0.323 Sum_probs=49.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
.++++||=||=|.=.++..|++.. ..++|.-.|. ++.+ .+++|+.. ..+++++. -|+.++... ...
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~--~~~~---~a~~~~~~--~~~v~~~~-~D~~~~~~~---~~~ 94 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDH--KLCK---TTENKLVD--HDNFQVLN-KDILQFKFP---KNQ 94 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCH--HHHH---HHHHHTTT--CCSEEEEC-CCGGGCCCC---SSC
T ss_pred CCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCH--HHHH---HHHHhhcc--CCCeEEEE-ChHHhCCcc---cCC
Confidence 467899999999999999999863 4677776663 2222 24444432 12455554 488876431 123
Q ss_pred CcceEEEcCCCC
Q 016441 102 KFDRIIFNFPHA 113 (389)
Q Consensus 102 ~FDrIIFNFPH~ 113 (389)
.| .||.|.|.-
T Consensus 95 ~~-~vv~nlPy~ 105 (244)
T 1qam_A 95 SY-KIFGNIPYN 105 (244)
T ss_dssp CC-EEEEECCGG
T ss_pred Ce-EEEEeCCcc
Confidence 45 799999984
No 349
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=25.67 E-value=66 Score=29.75 Aligned_cols=95 Identities=16% Similarity=0.081 Sum_probs=56.1
Q ss_pred CCCCCCeEEEEec-CChhH-HHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH-hCCCEEEeccccCCCCCC-
Q 016441 20 HYSSNHQILLVGE-GDFSF-SLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLK-KLGTCILHGVDATTMELH- 95 (389)
Q Consensus 20 ~Yss~~rILLVGE-GDFSF-SlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr-~~Gv~VlfgVDATkL~~~- 95 (389)
....+++||++|= |..-. +..+++..| .+|++|+.+. +.++.++ ++|+...+ |.++-...
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--~~V~~~~~~~------------~~~~~~~~~~g~~~~~--d~~~~~~~~ 215 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMMG--CYVVGSAGSK------------EKVDLLKTKFGFDDAF--NYKEESDLT 215 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSH------------HHHHHHHHTSCCSEEE--ETTSCSCSH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCH------------HHHHHHHHHcCCceEE--ecCCHHHHH
Confidence 3457889999996 65543 334456654 4799887642 2344555 67876544 43321110
Q ss_pred ---CCcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 96 ---PDLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 96 ---~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
..+....+|.||-+ +|. .-+..+.++|+++|.|.+
T Consensus 216 ~~~~~~~~~~~d~vi~~---~g~------------------~~~~~~~~~l~~~G~~v~ 253 (345)
T 2j3h_A 216 AALKRCFPNGIDIYFEN---VGG------------------KMLDAVLVNMNMHGRIAV 253 (345)
T ss_dssp HHHHHHCTTCEEEEEES---SCH------------------HHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhCCCCcEEEEC---CCH------------------HHHHHHHHHHhcCCEEEE
Confidence 00112469988765 331 125667788999998765
No 350
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=25.63 E-value=91 Score=28.64 Aligned_cols=96 Identities=16% Similarity=0.161 Sum_probs=55.1
Q ss_pred CCCCCCeEEEEe-cCChhHHH-HHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCC
Q 016441 20 HYSSNHQILLVG-EGDFSFSL-CLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPD 97 (389)
Q Consensus 20 ~Yss~~rILLVG-EGDFSFSl-SLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~ 97 (389)
....+++||++| -|..-.+. .+++..| .+|++|+.+. + .++.++++|+.... |.++-.....
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--~~V~~~~~~~-~-----------~~~~~~~~g~~~~~--~~~~~~~~~~ 200 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKALG--AKLIGTVGTA-Q-----------KAQSALKAGAWQVI--NYREEDLVER 200 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHHT--CEEEEEESSH-H-----------HHHHHHHHTCSEEE--ETTTSCHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCH-H-----------HHHHHHHcCCCEEE--ECCCccHHHH
Confidence 445788999999 57654433 3355555 4899987652 1 12334455766544 4332110000
Q ss_pred ----cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 98 ----LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 98 ----Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
.....+|.||-|- |. ..+..+.++|+++|.|.+.
T Consensus 201 ~~~~~~~~~~D~vi~~~---g~------------------~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 201 LKEITGGKKVRVVYDSV---GR------------------DTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp HHHHTTTCCEEEEEECS---CG------------------GGHHHHHHTEEEEEEEEEC
T ss_pred HHHHhCCCCceEEEECC---ch------------------HHHHHHHHHhcCCCEEEEE
Confidence 1234699988763 31 1256677889999977543
No 351
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=25.53 E-value=68 Score=30.87 Aligned_cols=117 Identities=15% Similarity=0.131 Sum_probs=62.4
Q ss_pred hhccccccCCCCCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC--EEE-eccc
Q 016441 12 EKEEKWIKHYSSNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGT--CIL-HGVD 88 (389)
Q Consensus 12 ~~~~K~~~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv--~Vl-fgVD 88 (389)
+..+| ....+..+||=+|=|-=+||.-.++..+ ...++|...- .++..+ |-. .+..|. ..+ =++|
T Consensus 65 ei~ek--~~l~~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVG--vDl~~~-pi~------~~~~g~~ii~~~~~~d 132 (277)
T 3evf_A 65 WFHER--GYVKLEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLG--RDGHEK-PMN------VQSLGWNIITFKDKTD 132 (277)
T ss_dssp HHHHT--TSSCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCC--CTTCCC-CCC------CCBTTGGGEEEECSCC
T ss_pred HHHHh--CCCCCCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEe--ccCccc-ccc------cCcCCCCeEEEeccce
Confidence 34445 3456777898888888888876655432 1233332111 111000 000 011121 111 1223
Q ss_pred cCCCCCCCCcCCCCcceEEEcC-CCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCC-CeEEEEecC
Q 016441 89 ATTMELHPDLRTRKFDRIIFNF-PHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDG-GEVHVSHKT 155 (389)
Q Consensus 89 ATkL~~~~~Lk~~~FDrIIFNF-PH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~-GeIHVTLk~ 155 (389)
+. .+...+||.|+-+. |++|.. .-|+.+.+. | +.-|.++|+++ |...+-.++
T Consensus 133 v~------~l~~~~~DlVlsD~apnsG~~-~~D~~rs~~----L----L~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 133 IH------RLEPVKCDTLLCDIGESSSSS-VTEGERTVR----V----LDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp TT------TSCCCCCSEEEECCCCCCSCH-HHHHHHHHH----H----HHHHHHHHTTCCSEEEEEESC
T ss_pred eh------hcCCCCccEEEecCccCcCch-HHHHHHHHH----H----HHHHHHHhCCCCCeEEEEecC
Confidence 32 34567899999997 886631 112222221 2 77799999999 999998888
No 352
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=25.34 E-value=96 Score=28.51 Aligned_cols=96 Identities=20% Similarity=0.260 Sum_probs=53.9
Q ss_pred CCCC-eEEEEec-CChh-HHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCc
Q 016441 22 SSNH-QILLVGE-GDFS-FSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDL 98 (389)
Q Consensus 22 ss~~-rILLVGE-GDFS-FSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~L 98 (389)
..++ +||++|- |..- ++..||+..| ..+++|+-..+ .++.++++|+...+..+-..-.....+
T Consensus 148 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~------------~~~~~~~lGa~~v~~~~~~~~~~~~~~ 213 (330)
T 1tt7_A 148 SPEKGSVLVTGATGGVGGIAVSMLNKRG--YDVVASTGNRE------------AADYLKQLGASEVISREDVYDGTLKAL 213 (330)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHHT--CCEEEEESSSS------------THHHHHHHTCSEEEEHHHHCSSCCCSS
T ss_pred CCCCceEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHH------------HHHHHHHcCCcEEEECCCchHHHHHHh
Confidence 3444 8999997 7664 4555677776 46888876531 223445567765543321110111122
Q ss_pred CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 99 RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 99 k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
....+|.|+-+ +|. + -+..+.++|+++|.|.+.
T Consensus 214 ~~~~~d~vid~---~g~---~---------------~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 214 SKQQWQGAVDP---VGG---K---------------QLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp CCCCEEEEEES---CCT---H---------------HHHHHHTTEEEEEEEEEC
T ss_pred hcCCccEEEEC---CcH---H---------------HHHHHHHhhcCCCEEEEE
Confidence 33568877643 342 1 145677889999987643
No 353
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=25.30 E-value=1.8e+02 Score=25.81 Aligned_cols=87 Identities=8% Similarity=0.096 Sum_probs=45.6
Q ss_pred cccccCCCCCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccCCC
Q 016441 15 EKWIKHYSSNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDATTM 92 (389)
Q Consensus 15 ~K~~~~Yss~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDATkL 92 (389)
..+....++.++||+.|=+. -.-+++|+.+ ..+.+|+.+.-.+.+.+ +...+.+++.|..+ .+.+|.++.
T Consensus 17 n~~~~~m~~~k~vlITGas~-gIG~a~a~~l~~~G~~V~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~Dl~~~ 88 (272)
T 4e3z_A 17 NLYFQSMSDTPVVLVTGGSR-GIGAAVCRLAARQGWRVGVNYAANREAA-------DAVVAAITESGGEAVAIPGDVGNA 88 (272)
T ss_dssp -------CCSCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCEEEEEECCTTCH
T ss_pred hhhhhhccCCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCChhHH-------HHHHHHHHhcCCcEEEEEcCCCCH
Confidence 34445556677899988554 3445555443 23567776644444332 23445666666554 466788775
Q ss_pred CCCCCc------CCCCcceEEEc
Q 016441 93 ELHPDL------RTRKFDRIIFN 109 (389)
Q Consensus 93 ~~~~~L------k~~~FDrIIFN 109 (389)
.....+ +..+.|.||.|
T Consensus 89 ~~v~~~~~~~~~~~g~id~li~n 111 (272)
T 4e3z_A 89 ADIAAMFSAVDRQFGRLDGLVNN 111 (272)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEC
Confidence 432211 11468988877
No 354
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=24.86 E-value=64 Score=28.84 Aligned_cols=78 Identities=17% Similarity=0.140 Sum_probs=45.0
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeccccCCCCCCCCc---
Q 016441 24 NHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTC-ILHGVDATTMELHPDL--- 98 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~-VlfgVDATkL~~~~~L--- 98 (389)
+++||+.|=+.+ .-.+|++.+ ..+.+|++++.+. +. .++..++|++.|.. ..+.+|.++......+
T Consensus 31 ~k~vlITGasgg-IG~~la~~L~~~G~~V~~~~r~~-~~-------~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~ 101 (272)
T 1yb1_A 31 GEIVLITGAGHG-IGRLTAYEFAKLKSKLVLWDINK-HG-------LEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKK 101 (272)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCH-HH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEEcCH-HH-------HHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHH
Confidence 467999996654 344555443 1246788887763 22 23344566666654 3567788775432111
Q ss_pred ---CCCCcceEEEcC
Q 016441 99 ---RTRKFDRIIFNF 110 (389)
Q Consensus 99 ---k~~~FDrIIFNF 110 (389)
.....|.||.|=
T Consensus 102 ~~~~~g~iD~li~~A 116 (272)
T 1yb1_A 102 VKAEIGDVSILVNNA 116 (272)
T ss_dssp HHHHTCCCSEEEECC
T ss_pred HHHHCCCCcEEEECC
Confidence 124689988874
No 355
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=24.82 E-value=1.4e+02 Score=28.23 Aligned_cols=111 Identities=16% Similarity=0.223 Sum_probs=60.3
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCC-CCC
Q 016441 20 HYSSNHQILLVGEGDF-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMEL-HPD 97 (389)
Q Consensus 20 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~-~~~ 97 (389)
....+++||++|=|.. .++..||++.| ...|+||..+ .+.++.++++|+.+ ||.++-.. ...
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~------------~~~~~~a~~lGa~~---i~~~~~~~~~~~ 245 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLN------------PARLAHAKAQGFEI---ADLSLDTPLHEQ 245 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESC------------HHHHHHHHHTTCEE---EETTSSSCHHHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCC------------HHHHHHHHHcCCcE---EccCCcchHHHH
Confidence 4567899999997764 46677788875 3468888553 23456778899974 44433110 000
Q ss_pred c----CCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 98 L----RTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 98 L----k~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
+ .+..+|.|+=. +|......... -.|..--..-+..+.++|+++|.|.+
T Consensus 246 v~~~t~g~g~Dvvid~---~G~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~G~iv~ 298 (398)
T 1kol_A 246 IAALLGEPEVDCAVDA---VGFEARGHGHE--GAKHEAPATVLNSLMQVTRVAGKIGI 298 (398)
T ss_dssp HHHHHSSSCEEEEEEC---CCTTCBCSSTT--GGGSBCTTHHHHHHHHHEEEEEEEEE
T ss_pred HHHHhCCCCCCEEEEC---CCCcccccccc--cccccchHHHHHHHHHHHhcCCEEEE
Confidence 1 23468987643 23210000000 00000001235667788999998854
No 356
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=24.81 E-value=17 Score=36.19 Aligned_cols=39 Identities=13% Similarity=0.222 Sum_probs=24.9
Q ss_pred CCCCCCeEEEEecCChhHHHH--HHHHhCCCCcEEeccccC
Q 016441 20 HYSSNHQILLVGEGDFSFSLC--LALAFGSASNICASSLDS 58 (389)
Q Consensus 20 ~Yss~~rILLVGEGDFSFSlS--La~~~gs~~nLvATSlDS 58 (389)
.+-.+.|+.+.||+++.++++ |.+.+|-..-.++|.+-+
T Consensus 303 ~~l~Gkrv~i~g~~~~~~~l~~~L~~elG~~vv~~~~~~~~ 343 (437)
T 3aek_A 303 ETLTGKSLFMFPDSQLEIPLARFLARECGMKTTEIATPFLH 343 (437)
T ss_dssp HHHTTCEEEECSSSSCHHHHHHHHHHTTCCEEEEEEESCCC
T ss_pred HHhCCCEEEEEcCchHHHHHHHHHHHHcCCEEEEEEecCCC
Confidence 344578999999999887776 335565433444454444
No 357
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=24.80 E-value=1.2e+02 Score=25.85 Aligned_cols=57 Identities=19% Similarity=0.316 Sum_probs=37.0
Q ss_pred eEEEEecCChhHHHHHHHH----hCCCCcEEecccc---CHHHHHHhhhhHHHHHHHHHh-CCCEEEecc
Q 016441 26 QILLVGEGDFSFSLCLALA----FGSASNICASSLD---SYDDVIQKYKRAKSNLDNLKK-LGTCILHGV 87 (389)
Q Consensus 26 rILLVGEGDFSFSlSLa~~----~gs~~nLvATSlD---SeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgV 87 (389)
.|++|+=| +||.+|+.. +|...++.|-++. +.+++.+|. .+-++.+.+ .|+-|+.++
T Consensus 3 giii~sHg--~~A~gl~~~~~~i~G~~~~i~av~~~~~~~~~~~~~~i---~~~i~~~~~~~gvlvLtDl 67 (150)
T 3ipr_A 3 GIVIATHG--ALSDGAKDAATVIMGATENIETVNLNSGDDVQALGGQI---KTAIENVQQGDGVLVMVDL 67 (150)
T ss_dssp EEEEEEET--THHHHHHHHHHHHHSCCCSEEEEEECTTCCHHHHHHHH---HHHHHHHCSSSCEEEEESS
T ss_pred EEEEEECc--HHHHHHHHHHHHHcCCCCCEEEEEecCCCCHHHHHHHH---HHHHHhcCCCCCEEEEEeC
Confidence 58999999 788888753 3655677776664 556677664 444555543 455555443
No 358
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=24.80 E-value=32 Score=32.19 Aligned_cols=97 Identities=15% Similarity=0.237 Sum_probs=56.9
Q ss_pred CCCCCCeEEEEec-CChh-HHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC-C
Q 016441 20 HYSSNHQILLVGE-GDFS-FSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH-P 96 (389)
Q Consensus 20 ~Yss~~rILLVGE-GDFS-FSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~-~ 96 (389)
....+++||+.|- |..- .+..+|++.| .++++|+.+.+ .++.++++|+......+ ..+.+. .
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~G--a~Vi~~~~~~~------------~~~~~~~~ga~~v~~~~-~~~~~~v~ 220 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGMG--AKVIAVVNRTA------------ATEFVKSVGADIVLPLE-EGWAKAVR 220 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSGG------------GHHHHHHHTCSEEEESS-TTHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHH------------HHHHHHhcCCcEEecCc-hhHHHHHH
Confidence 4567899999997 6654 3444567665 48999886532 22345556877665444 222110 0
Q ss_pred C-cCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 97 D-LRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 97 ~-Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
. ..+..+|.|+-+ +|. + .+..+..+|+++|.|.+.
T Consensus 221 ~~~~~~g~Dvvid~---~g~---~---------------~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 221 EATGGAGVDMVVDP---IGG---P---------------AFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp HHTTTSCEEEEEES---CC--------------------CHHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCceEEEEC---Cch---h---------------HHHHHHHhhcCCCEEEEE
Confidence 0 123468977653 342 1 245677889999987754
No 359
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=24.51 E-value=65 Score=25.05 Aligned_cols=74 Identities=19% Similarity=0.280 Sum_probs=39.0
Q ss_pred CCeEEEEecCChhHHHHHH-HHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 24 NHQILLVGEGDFSFSLCLA-LAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa-~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
..+|+++|=|..-..++-. ... +..+++...+. +.++.+++.|..++. .|.++........-..
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~--g~~v~~~d~~~------------~~~~~~~~~~~~~~~-~d~~~~~~l~~~~~~~ 70 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRM--GHEVLAVDINE------------EKVNAYASYATHAVI-ANATEENELLSLGIRN 70 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCCEEEESCH------------HHHHTTTTTCSEEEE-CCTTCHHHHHTTTGGG
T ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCH------------HHHHHHHHhCCEEEE-eCCCCHHHHHhcCCCC
Confidence 4579999987665544432 222 34566654431 123445556776543 3554421111111246
Q ss_pred cceEEEcCCC
Q 016441 103 FDRIIFNFPH 112 (389)
Q Consensus 103 FDrIIFNFPH 112 (389)
.|.||..-|.
T Consensus 71 ~d~vi~~~~~ 80 (144)
T 2hmt_A 71 FEYVIVAIGA 80 (144)
T ss_dssp CSEEEECCCS
T ss_pred CCEEEECCCC
Confidence 8999987653
No 360
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=24.50 E-value=2.5e+02 Score=24.00 Aligned_cols=78 Identities=14% Similarity=0.173 Sum_probs=43.4
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHH-hCCCE-EEeccccCCCCCCCCcC-
Q 016441 24 NHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLK-KLGTC-ILHGVDATTMELHPDLR- 99 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr-~~Gv~-VlfgVDATkL~~~~~Lk- 99 (389)
.+++|+.|=+.+ .-+++|+.+ ..+.+|+.++.+. +.+ ++..++|. ..|.. ..+.+|.++......+-
T Consensus 2 ~k~vlITGas~g-IG~~ia~~l~~~G~~V~~~~r~~-~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 72 (235)
T 3l77_A 2 MKVAVITGASRG-IGEAIARALARDGYALALGARSV-DRL-------EKIAHELMQEQGVEVFYHHLDVSKAESVEEFSK 72 (235)
T ss_dssp CCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCH-HHH-------HHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCH-HHH-------HHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHH
Confidence 467899986543 445555444 1356788887763 222 22333443 33544 45678888765432111
Q ss_pred -----CCCcceEEEcC
Q 016441 100 -----TRKFDRIIFNF 110 (389)
Q Consensus 100 -----~~~FDrIIFNF 110 (389)
..+.|.+|.|=
T Consensus 73 ~~~~~~g~id~li~~A 88 (235)
T 3l77_A 73 KVLERFGDVDVVVANA 88 (235)
T ss_dssp -HHHHHSSCSEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 14789888773
No 361
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=24.41 E-value=52 Score=31.02 Aligned_cols=97 Identities=16% Similarity=0.165 Sum_probs=55.0
Q ss_pred CCCCCCeEEEEec-CChhHHH-HHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC-C
Q 016441 20 HYSSNHQILLVGE-GDFSFSL-CLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH-P 96 (389)
Q Consensus 20 ~Yss~~rILLVGE-GDFSFSl-SLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~-~ 96 (389)
....+++||+.|- |..-.+. .+++..| ..|++|+.+.+ .++.++++|+.....++...+.+. .
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~G--a~Vi~~~~~~~------------~~~~~~~~ga~~~~d~~~~~~~~~~~ 232 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAYG--LKILGTAGTEE------------GQKIVLQNGAHEVFNHREVNYIDKIK 232 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESSHH------------HHHHHHHTTCSEEEETTSTTHHHHHH
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHCC--CEEEEEeCChh------------HHHHHHHcCCCEEEeCCCchHHHHHH
Confidence 4457889999997 7655443 3455554 57999876531 223456678765543322111000 0
Q ss_pred -CcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 97 -DLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 97 -~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
...+..+|.||-| +|. .-+..+.++|+++|.|.+
T Consensus 233 ~~~~~~~~D~vi~~---~G~------------------~~~~~~~~~l~~~G~iv~ 267 (351)
T 1yb5_A 233 KYVGEKGIDIIIEM---LAN------------------VNLSKDLSLLSHGGRVIV 267 (351)
T ss_dssp HHHCTTCEEEEEES---CHH------------------HHHHHHHHHEEEEEEEEE
T ss_pred HHcCCCCcEEEEEC---CCh------------------HHHHHHHHhccCCCEEEE
Confidence 0123468988754 331 113456788899998764
No 362
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=24.35 E-value=53 Score=32.16 Aligned_cols=53 Identities=19% Similarity=0.266 Sum_probs=35.4
Q ss_pred CCCCCCeEEEEec-CChh-HHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEec
Q 016441 20 HYSSNHQILLVGE-GDFS-FSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHG 86 (389)
Q Consensus 20 ~Yss~~rILLVGE-GDFS-FSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~Vlfg 86 (389)
....+++||++|- |..- ++..||+..| ..+|+++- +. ++++.++++|+.....
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~G--a~vi~~~~-~~-----------~~~~~~~~lGa~~vi~ 279 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAGG--ANPICVVS-SP-----------QKAEICRAMGAEAIID 279 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEES-SH-----------HHHHHHHHHTCCEEEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcC--CeEEEEEC-CH-----------HHHHHHHhhCCcEEEe
Confidence 4567899999998 7654 4445567664 57788763 32 3456677889865543
No 363
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=24.29 E-value=1.6e+02 Score=27.45 Aligned_cols=82 Identities=22% Similarity=0.204 Sum_probs=50.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCC-CCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcC-
Q 016441 22 SSNHQILLVGEGDFSFSLCLALAFGS-ASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLR- 99 (389)
Q Consensus 22 ss~~rILLVGEGDFSFSlSLa~~~gs-~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk- 99 (389)
.++++||=||=|.=.++..|++.... ...|+|.-.|. ++.+ .++++. ..+++++. -|+.++.-.....
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~--~~l~---~a~~~~----~~~v~~i~-~D~~~~~~~~~~~~ 110 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDR--DLIG---RLEQRF----GELLELHA-GDALTFDFGSIARP 110 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCH--HHHH---HHHHHH----GGGEEEEE-SCGGGCCGGGGSCS
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCH--HHHH---HHHHhc----CCCcEEEE-CChhcCChhHhccc
Confidence 46789999999999999999987532 23488877763 2322 234441 23455554 4888765321111
Q ss_pred -CCCcceEEEcCCCC
Q 016441 100 -TRKFDRIIFNFPHA 113 (389)
Q Consensus 100 -~~~FDrIIFNFPH~ 113 (389)
....++||-|.|--
T Consensus 111 ~~~~~~~vv~NlPY~ 125 (279)
T 3uzu_A 111 GDEPSLRIIGNLPYN 125 (279)
T ss_dssp SSSCCEEEEEECCHH
T ss_pred ccCCceEEEEccCcc
Confidence 01346899999954
No 364
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=24.22 E-value=37 Score=30.20 Aligned_cols=78 Identities=10% Similarity=0.127 Sum_probs=46.7
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccCCCCCCCCc---
Q 016441 24 NHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDATTMELHPDL--- 98 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDATkL~~~~~L--- 98 (389)
+++||+.|=+.+ .-+++|+.+ ..+.+|++++.+.. . .++..++|++.|..+ .+.+|.++......+
T Consensus 29 ~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~-~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 99 (262)
T 3rkr_A 29 GQVAVVTGASRG-IGAAIARKLGSLGARVVLTARDVE-K-------LRAVEREIVAAGGEAESHACDLSHSDAIAAFATG 99 (262)
T ss_dssp TCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEECCHH-H-------HHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHH
Confidence 567899985543 445555443 23568998887632 1 334556677777554 467788876543211
Q ss_pred ---CCCCcceEEEcC
Q 016441 99 ---RTRKFDRIIFNF 110 (389)
Q Consensus 99 ---k~~~FDrIIFNF 110 (389)
+..+.|.||.|=
T Consensus 100 ~~~~~g~id~lv~~A 114 (262)
T 3rkr_A 100 VLAAHGRCDVLVNNA 114 (262)
T ss_dssp HHHHHSCCSEEEECC
T ss_pred HHHhcCCCCEEEECC
Confidence 124689988873
No 365
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=24.20 E-value=1.4e+02 Score=27.42 Aligned_cols=53 Identities=21% Similarity=0.202 Sum_probs=42.3
Q ss_pred CeEEEEecCChhHHHHH-HHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEec
Q 016441 25 HQILLVGEGDFSFSLCL-ALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHG 86 (389)
Q Consensus 25 ~rILLVGEGDFSFSlSL-a~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~Vlfg 86 (389)
.+|-+||=+|....+.. ...++ .+|.--++++++++ ..-+++|++.|+.|+-|
T Consensus 107 ~kIavVg~~~~~~~~~~i~~ll~--~~i~~~~~~~~ee~-------~~~i~~l~~~G~~vVVG 160 (225)
T 2pju_A 107 SSIGVVTYQETIPALVAFQKTFN--LRLDQRSYITEEDA-------RGQINELKANGTEAVVG 160 (225)
T ss_dssp SCEEEEEESSCCHHHHHHHHHHT--CCEEEEEESSHHHH-------HHHHHHHHHTTCCEEEE
T ss_pred CcEEEEeCchhhhHHHHHHHHhC--CceEEEEeCCHHHH-------HHHHHHHHHCCCCEEEC
Confidence 48999999999888664 45554 56777889998766 45789999999988877
No 366
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=24.09 E-value=1.7e+02 Score=28.14 Aligned_cols=99 Identities=13% Similarity=0.104 Sum_probs=56.9
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH--HhCCCEEEeccccCCCCCCCCcCCC
Q 016441 24 NHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNL--KKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~L--r~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
..+||+|||+-==.+++|+.. ....+..|+-++.. .+.|++.- ....++.+-. +.. -..
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~-------~~~n~~~~~~~~~~~~~~~~-----~~~----~~~ 99 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEH---KPYSIGDSYISELA-------TRENLRLNGIDESSVKFLDS-----TAD----YPQ 99 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHH-------HHHHHHHTTCCGGGSEEEET-----TSC----CCS
T ss_pred CCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHH-------HHHHHHHcCCCccceEeccc-----ccc----ccc
Confidence 457999999877677777642 22333333333322 23455332 1111233211 111 125
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCC
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTT 156 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 156 (389)
.+|.|+.-.|- ++.++..-+..+...|+++++|.+.-.++
T Consensus 100 ~~~~v~~~lpk---------------~~~~l~~~L~~l~~~l~~~~~i~~~g~~~ 139 (375)
T 4dcm_A 100 QPGVVLIKVPK---------------TLALLEQQLRALRKVVTSDTRIIAGAKAR 139 (375)
T ss_dssp SCSEEEEECCS---------------CHHHHHHHHHHHHTTCCTTSEEEEEEEGG
T ss_pred CCCEEEEEcCC---------------CHHHHHHHHHHHHhhCCCCCEEEEEeccc
Confidence 69999998772 33456667778888899999997665544
No 367
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=23.74 E-value=73 Score=28.16 Aligned_cols=79 Identities=11% Similarity=0.149 Sum_probs=44.7
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccCCCCCCCCc-C
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDATTMELHPDL-R 99 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDATkL~~~~~L-k 99 (389)
++++||+.|=+.+ .-+++++.+ ..+.+|++++.+. +. .++..++|++.|..+ .+.+|.++......+ +
T Consensus 8 ~~k~vlVTGas~g-iG~~ia~~l~~~G~~V~~~~r~~-~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (260)
T 2ae2_A 8 EGCTALVTGGSRG-IGYGIVEELASLGASVYTCSRNQ-KE-------LNDCLTQWRSKGFKVEASVCDLSSRSERQELMN 78 (260)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCH-HH-------HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCH-HH-------HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 3567999986654 233343332 1256888887763 22 233455666667654 356788775432111 0
Q ss_pred -----C-CCcceEEEcC
Q 016441 100 -----T-RKFDRIIFNF 110 (389)
Q Consensus 100 -----~-~~FDrIIFNF 110 (389)
. .+.|.+|.|=
T Consensus 79 ~~~~~~~g~id~lv~~A 95 (260)
T 2ae2_A 79 TVANHFHGKLNILVNNA 95 (260)
T ss_dssp HHHHHTTTCCCEEEECC
T ss_pred HHHHHcCCCCCEEEECC
Confidence 1 5689888773
No 368
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=23.37 E-value=5.6e+02 Score=26.98 Aligned_cols=106 Identities=18% Similarity=0.088 Sum_probs=53.9
Q ss_pred cEEeccccCHHHHHHhhhhHHHHHHHHHhCCC---EEEeccccCCCCCCCCcCCCCcceEEEcCCCCCCCCCccchHHHH
Q 016441 50 NICASSLDSYDDVIQKYKRAKSNLDNLKKLGT---CILHGVDATTMELHPDLRTRKFDRIIFNFPHAGFYGKEDNHLLIE 126 (389)
Q Consensus 50 nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv---~VlfgVDATkL~~~~~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir 126 (389)
.|++.-.|. + +.+ -|+.|++. .|+ .-+..-|+.++... .....||.||.|=|--...|.+.
T Consensus 258 ~i~G~Did~-~-av~---~A~~N~~~---agv~~~i~~~~~D~~~~~~~--~~~~~~d~Iv~NPPYG~Rlg~~~------ 321 (703)
T 3v97_A 258 HFYGSDSDA-R-VIQ---RARTNARL---AGIGELITFEVKDVAQLTNP--LPKGPYGTVLSNPPYGERLDSEP------ 321 (703)
T ss_dssp CEEEEESCH-H-HHH---HHHHHHHH---TTCGGGEEEEECCGGGCCCS--CTTCCCCEEEECCCCCC---CCH------
T ss_pred cEEEEECCH-H-HHH---HHHHHHHH---cCCCCceEEEECChhhCccc--cccCCCCEEEeCCCccccccchh------
Confidence 566655553 2 222 25666543 454 34566788876432 12237999999988733222211
Q ss_pred HhHHHHHHHHHhhHhcccCCCeEEEEecCCCCCCcccHHHHHhhCCcEEEEEeeC
Q 016441 127 MHRSLVRDFFRNSSGMLRDGGEVHVSHKTTVPFSNWNIKELAIGSSLSLIWCSEF 181 (389)
Q Consensus 127 ~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnIe~LAa~aGL~L~~~~~F 181 (389)
.-..|...+-...+ .+.++|.+.|-.-+. ++.+.-|++..++.++
T Consensus 322 ~l~~ly~~l~~~lk-~~~~g~~~~ilt~~~---------~l~~~~glk~~k~~~l 366 (703)
T 3v97_A 322 ALIALHSLLGRIMK-NQFGGWNLSLFSASP---------DLLSCLQLRADKQYKA 366 (703)
T ss_dssp HHHHHHHHHHHHHH-HHCTTCEEEEEESCH---------HHHHTTCCCEEEEEEE
T ss_pred HHHHHHHHHHHHHH-hhCCCCeEEEEeCCH---------HHHHHhCCCcccceee
Confidence 11233333322222 234788887764432 3555666665555443
No 369
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=23.35 E-value=74 Score=29.63 Aligned_cols=96 Identities=17% Similarity=0.251 Sum_probs=55.5
Q ss_pred CCCCCCeEEEEecC-Chh-HHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCC--
Q 016441 20 HYSSNHQILLVGEG-DFS-FSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMEL-- 94 (389)
Q Consensus 20 ~Yss~~rILLVGEG-DFS-FSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~-- 94 (389)
...++++||++|=| ..- .+..+++.. | .+|++|..+.+ .++.++++|+.... |.++-..
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~G--a~Vi~~~~~~~------------~~~~~~~~g~~~~~--~~~~~~~~~ 230 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSG--ATIIGVDVREE------------AVEAAKRAGADYVI--NASMQDPLA 230 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTC--CEEEEEESSHH------------HHHHHHHHTCSEEE--ETTTSCHHH
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCC--CeEEEEcCCHH------------HHHHHHHhCCCEEe--cCCCccHHH
Confidence 45678899999987 443 344445665 5 47888875521 22334556765544 3332110
Q ss_pred -CCCcCC-CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 95 -HPDLRT-RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 95 -~~~Lk~-~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
-..+.. ..+|.||-+ +|. . .-+..+.++|+++|.|.+
T Consensus 231 ~~~~~~~~~~~d~vi~~---~g~---~--------------~~~~~~~~~l~~~G~iv~ 269 (347)
T 1jvb_A 231 EIRRITESKGVDAVIDL---NNS---E--------------KTLSVYPKALAKQGKYVM 269 (347)
T ss_dssp HHHHHTTTSCEEEEEES---CCC---H--------------HHHTTGGGGEEEEEEEEE
T ss_pred HHHHHhcCCCceEEEEC---CCC---H--------------HHHHHHHHHHhcCCEEEE
Confidence 001111 479988765 342 1 246778889999998765
No 370
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=22.96 E-value=64 Score=29.56 Aligned_cols=78 Identities=15% Similarity=0.154 Sum_probs=47.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccCCCCCCCCc--
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDATTMELHPDL-- 98 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDATkL~~~~~L-- 98 (389)
++++||+.|=+.+ .-+++|+.+ ..+.+|++++.+.. . .++..++|++.|..+ .+.+|.++......+
T Consensus 30 ~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~-~-------~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~ 100 (301)
T 3tjr_A 30 DGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQP-A-------LEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLAD 100 (301)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHH-H-------HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence 4567999997653 344444433 13568988887632 1 334556777777544 467888876543211
Q ss_pred ----CCCCcceEEEc
Q 016441 99 ----RTRKFDRIIFN 109 (389)
Q Consensus 99 ----k~~~FDrIIFN 109 (389)
...+.|.||.|
T Consensus 101 ~~~~~~g~id~lvnn 115 (301)
T 3tjr_A 101 EAFRLLGGVDVVFSN 115 (301)
T ss_dssp HHHHHHSSCSEEEEC
T ss_pred HHHHhCCCCCEEEEC
Confidence 11478988877
No 371
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=22.66 E-value=65 Score=28.64 Aligned_cols=79 Identities=18% Similarity=0.304 Sum_probs=47.0
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccCCCCCCCCcC-
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDATTMELHPDLR- 99 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDATkL~~~~~Lk- 99 (389)
+++++|+.|=+.+ .-+++|+.+ ..+.+|++++.+.. ..++..++|++.|..+ .+.+|.++......+-
T Consensus 6 ~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 76 (252)
T 3h7a_A 6 RNATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGE--------KLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLN 76 (252)
T ss_dssp CSCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGG--------GGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHH--------HHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHH
Confidence 3567899987653 344444443 13568888887642 2334556677777654 4677888765432110
Q ss_pred ----CCCcceEEEcC
Q 016441 100 ----TRKFDRIIFNF 110 (389)
Q Consensus 100 ----~~~FDrIIFNF 110 (389)
..+.|.+|.|=
T Consensus 77 ~~~~~g~id~lv~nA 91 (252)
T 3h7a_A 77 AADAHAPLEVTIFNV 91 (252)
T ss_dssp HHHHHSCEEEEEECC
T ss_pred HHHhhCCceEEEECC
Confidence 15789888773
No 372
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=22.55 E-value=1.6e+02 Score=26.22 Aligned_cols=77 Identities=14% Similarity=0.229 Sum_probs=41.9
Q ss_pred CCeEEEEecC--ChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCCCCCc-
Q 016441 24 NHQILLVGEG--DFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMELHPDL- 98 (389)
Q Consensus 24 ~~rILLVGEG--DFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~~~~L- 98 (389)
+++||+.|=+ .+ .-+++|+.+ ..+.+|++++.+.. + .+.+++|++ .|....+.+|.++......+
T Consensus 6 ~k~vlVTGas~~~g-IG~~~a~~l~~~G~~V~~~~r~~~--~-------~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~ 75 (275)
T 2pd4_A 6 GKKGLIVGVANNKS-IAYGIAQSCFNQGATLAFTYLNES--L-------EKRVRPIAQELNSPYVYELDVSKEEHFKSLY 75 (275)
T ss_dssp TCEEEEECCCSTTS-HHHHHHHHHHTTTCEEEEEESSTT--T-------HHHHHHHHHHTTCCCEEECCTTCHHHHHHHH
T ss_pred CCEEEEECCCCCCc-HHHHHHHHHHHCCCEEEEEeCCHH--H-------HHHHHHHHHhcCCcEEEEcCCCCHHHHHHHH
Confidence 5689999964 21 333444333 23568888887652 1 123344433 24334566788775432111
Q ss_pred -----CCCCcceEEEcC
Q 016441 99 -----RTRKFDRIIFNF 110 (389)
Q Consensus 99 -----k~~~FDrIIFNF 110 (389)
+..+.|.||.|=
T Consensus 76 ~~~~~~~g~id~lv~nA 92 (275)
T 2pd4_A 76 NSVKKDLGSLDFIVHSV 92 (275)
T ss_dssp HHHHHHTSCEEEEEECC
T ss_pred HHHHHHcCCCCEEEECC
Confidence 124689888874
No 373
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=22.38 E-value=53 Score=29.70 Aligned_cols=78 Identities=14% Similarity=0.182 Sum_probs=46.2
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccCCCCCCCCc---
Q 016441 24 NHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDATTMELHPDL--- 98 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDATkL~~~~~L--- 98 (389)
++++|+.|=+.+ --+++|+.+ ..+.+|+++..+. + ..++.+++|++.|..+ .+.+|.++......+
T Consensus 26 gk~~lVTGas~g-IG~aia~~la~~G~~V~~~~r~~-~-------~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~ 96 (271)
T 4ibo_A 26 GRTALVTGSSRG-LGRAMAEGLAVAGARILINGTDP-S-------RVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFAR 96 (271)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCH-H-------HHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCH-H-------HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 567888886543 333444433 1356888887653 2 2345667778777554 466788875432211
Q ss_pred ---CCCCcceEEEcC
Q 016441 99 ---RTRKFDRIIFNF 110 (389)
Q Consensus 99 ---k~~~FDrIIFNF 110 (389)
+..+.|.+|.|=
T Consensus 97 ~~~~~g~iD~lv~nA 111 (271)
T 4ibo_A 97 LDEQGIDVDILVNNA 111 (271)
T ss_dssp HHHHTCCCCEEEECC
T ss_pred HHHHCCCCCEEEECC
Confidence 124789988873
No 374
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=22.09 E-value=1.5e+02 Score=25.98 Aligned_cols=79 Identities=19% Similarity=0.212 Sum_probs=44.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccCCCCCCCCc-C
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDATTMELHPDL-R 99 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDATkL~~~~~L-k 99 (389)
++++||+.|=+.+ .-.+|++.+ ..+.+|++++.+. +. .++..++|++.|..+ .+.+|.++......+ +
T Consensus 13 ~~k~vlITGasgg-iG~~la~~l~~~G~~V~~~~r~~-~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 83 (266)
T 1xq1_A 13 KAKTVLVTGGTKG-IGHAIVEEFAGFGAVIHTCARNE-YE-------LNECLSKWQKKGFQVTGSVCDASLRPEREKLMQ 83 (266)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCH-HH-------HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCH-HH-------HHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHH
Confidence 3567999987664 344444433 1246788887653 22 233455666666543 456777764322111 1
Q ss_pred ------CCCcceEEEcC
Q 016441 100 ------TRKFDRIIFNF 110 (389)
Q Consensus 100 ------~~~FDrIIFNF 110 (389)
..+.|.||.|=
T Consensus 84 ~~~~~~~~~id~li~~A 100 (266)
T 1xq1_A 84 TVSSMFGGKLDILINNL 100 (266)
T ss_dssp HHHHHHTTCCSEEEEEC
T ss_pred HHHHHhCCCCcEEEECC
Confidence 15689999874
No 375
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=21.95 E-value=54 Score=30.65 Aligned_cols=94 Identities=13% Similarity=0.264 Sum_probs=56.4
Q ss_pred CCCeEEEE-ecCChh-HHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCC-CCCcC
Q 016441 23 SNHQILLV-GEGDFS-FSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMEL-HPDLR 99 (389)
Q Consensus 23 s~~rILLV-GEGDFS-FSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~-~~~Lk 99 (389)
++++||++ |-|..- ++..||+..| .+|+||+-+. ++++.++++|+...+..+. .+.+ -..+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G--a~Vi~~~~~~------------~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~ 214 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG--LRVITTASRN------------ETIEWTKKMGADIVLNHKE-SLLNQFKTQG 214 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEECCSH------------HHHHHHHHHTCSEEECTTS-CHHHHHHHHT
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCH------------HHHHHHHhcCCcEEEECCc-cHHHHHHHhC
Confidence 68899999 677764 4444567665 4899997642 2456667788765543321 1100 01123
Q ss_pred CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEE
Q 016441 100 TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHV 151 (389)
Q Consensus 100 ~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHV 151 (389)
.+.+|.|+ |+ +|. ...+..+..+|+++|.|..
T Consensus 215 ~~g~Dvv~-d~--~g~-----------------~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 215 IELVDYVF-CT--FNT-----------------DMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp CCCEEEEE-ES--SCH-----------------HHHHHHHHHHEEEEEEEEE
T ss_pred CCCccEEE-EC--CCc-----------------hHHHHHHHHHhccCCEEEE
Confidence 45688665 42 331 1356778889999999853
No 376
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=21.58 E-value=1.5e+02 Score=26.73 Aligned_cols=79 Identities=18% Similarity=0.253 Sum_probs=47.5
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccCCCCCCCCc---
Q 016441 24 NHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDATTMELHPDL--- 98 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDATkL~~~~~L--- 98 (389)
++++|+.|=+.+ .-+++|+.+ ..+.+|+++...+.+.+ ++..++|++.|..+ .+.+|.++......+
T Consensus 29 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 100 (280)
T 4da9_A 29 RPVAIVTGGRRG-IGLGIARALAASGFDIAITGIGDAEGV-------APVIAELSGLGARVIFLRADLADLSSHQATVDA 100 (280)
T ss_dssp CCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCCHHHH-------HHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHH
T ss_pred CCEEEEecCCCH-HHHHHHHHHHHCCCeEEEEeCCCHHHH-------HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 467899986543 333444333 13568888876555433 34556677777544 467898886543221
Q ss_pred ---CCCCcceEEEcC
Q 016441 99 ---RTRKFDRIIFNF 110 (389)
Q Consensus 99 ---k~~~FDrIIFNF 110 (389)
+..+.|.+|.|=
T Consensus 101 ~~~~~g~iD~lvnnA 115 (280)
T 4da9_A 101 VVAEFGRIDCLVNNA 115 (280)
T ss_dssp HHHHHSCCCEEEEEC
T ss_pred HHHHcCCCCEEEECC
Confidence 114789999884
No 377
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=21.51 E-value=70 Score=31.01 Aligned_cols=54 Identities=15% Similarity=0.219 Sum_probs=34.7
Q ss_pred cCCCCCCeEEEEec-CChh-HHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEec
Q 016441 19 KHYSSNHQILLVGE-GDFS-FSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHG 86 (389)
Q Consensus 19 ~~Yss~~rILLVGE-GDFS-FSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~Vlfg 86 (389)
.....+++||+.|- |..- .+..||++.| ..+++|+- +. +.++.++++|+.....
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~G--a~vi~~~~-~~-----------~~~~~~~~lGa~~~i~ 271 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGG--GIPVAVVS-SA-----------QKEAAVRALGCDLVIN 271 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEES-SH-----------HHHHHHHHTTCCCEEE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeC-CH-----------HHHHHHHhcCCCEEEe
Confidence 34567899999997 7654 3445566654 57888763 32 2345567788765543
No 378
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=21.45 E-value=1.9e+02 Score=25.66 Aligned_cols=80 Identities=16% Similarity=0.131 Sum_probs=45.6
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeccccCCCCCCCCc--
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTC-ILHGVDATTMELHPDL-- 98 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~-VlfgVDATkL~~~~~L-- 98 (389)
+++++|+.|=+.+ .-+++|+.+ ..+.+|+++...+.+.+. ..++.++..|.. ..+.+|.++......+
T Consensus 24 ~~k~vlITGas~g-IG~~~a~~l~~~G~~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 95 (269)
T 3gk3_A 24 AKRVAFVTGGMGG-LGAAISRRLHDAGMAVAVSHSERNDHVS-------TWLMHERDAGRDFKAYAVDVADFESCERCAE 95 (269)
T ss_dssp CCCEEEETTTTSH-HHHHHHHHHHTTTCEEEEEECSCHHHHH-------HHHHHHHTTTCCCEEEECCTTCHHHHHHHHH
T ss_pred cCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCchHHHH-------HHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence 3567888886542 334444433 235688888766554332 334555666643 3467888876543211
Q ss_pred ----CCCCcceEEEcC
Q 016441 99 ----RTRKFDRIIFNF 110 (389)
Q Consensus 99 ----k~~~FDrIIFNF 110 (389)
+..+.|.||.|=
T Consensus 96 ~~~~~~g~id~li~nA 111 (269)
T 3gk3_A 96 KVLADFGKVDVLINNA 111 (269)
T ss_dssp HHHHHHSCCSEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 114789888873
No 379
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=21.40 E-value=50 Score=30.73 Aligned_cols=98 Identities=15% Similarity=0.089 Sum_probs=55.0
Q ss_pred CCCCCCeEEEEecCC-h-hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCC-C
Q 016441 20 HYSSNHQILLVGEGD-F-SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELH-P 96 (389)
Q Consensus 20 ~Yss~~rILLVGEGD-F-SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~-~ 96 (389)
...++++||++|-|. . ..+..||+..| .+++||+.+.+ .++.++++|+...+..+...+.+. .
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~------------~~~~~~~lga~~~~~~~~~~~~~~~~ 206 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQILN--FRLIAVTRNNK------------HTEELLRLGAAYVIDTSTAPLYETVM 206 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSST------------THHHHHHHTCSEEEETTTSCHHHHHH
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHcC--CEEEEEeCCHH------------HHHHHHhCCCcEEEeCCcccHHHHHH
Confidence 456788999999873 3 34555567765 47998876542 234455568765543332221110 0
Q ss_pred -CcCCCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 97 -DLRTRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 97 -~Lk~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
...+..+|.|+-+ +|. . .+.. +..+|+++|.|.+.
T Consensus 207 ~~~~~~g~Dvvid~---~g~---~--------------~~~~-~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 207 ELTNGIGADAAIDS---IGG---P--------------DGNE-LAFSLRPNGHFLTI 242 (340)
T ss_dssp HHTTTSCEEEEEES---SCH---H--------------HHHH-HHHTEEEEEEEEEC
T ss_pred HHhCCCCCcEEEEC---CCC---h--------------hHHH-HHHHhcCCCEEEEE
Confidence 0123579977653 442 1 1122 23689999987654
No 380
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=21.30 E-value=1.3e+02 Score=25.77 Aligned_cols=77 Identities=22% Similarity=0.209 Sum_probs=42.3
Q ss_pred CCeEEEEecCCh---hHHHHHHHHhCCCC-----cEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccCCCCC
Q 016441 24 NHQILLVGEGDF---SFSLCLALAFGSAS-----NICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDATTMEL 94 (389)
Q Consensus 24 ~~rILLVGEGDF---SFSlSLa~~~gs~~-----nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDATkL~~ 94 (389)
+++||+.|=+.+ ..++.|++. |... +|++++.+. +. .+...++|++.|..+ .+.+|.++...
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~-G~~~~~~~~~V~~~~r~~-~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~ 72 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARA-ARHHPDFEPVLVLSSRTA-AD-------LEKISLECRAEGALTDTITADISDMAD 72 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHH-TTTCTTCCEEEEEEESCH-HH-------HHHHHHHHHTTTCEEEEEECCTTSHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHh-cCcccccceEEEEEeCCH-HH-------HHHHHHHHHccCCeeeEEEecCCCHHH
Confidence 356899986654 344444443 2111 788887653 22 222345566666554 46778877543
Q ss_pred CCCc------CCCCcceEEEc
Q 016441 95 HPDL------RTRKFDRIIFN 109 (389)
Q Consensus 95 ~~~L------k~~~FDrIIFN 109 (389)
...+ +..+.|.||.|
T Consensus 73 v~~~~~~~~~~~g~id~li~~ 93 (244)
T 2bd0_A 73 VRRLTTHIVERYGHIDCLVNN 93 (244)
T ss_dssp HHHHHHHHHHHTSCCSEEEEC
T ss_pred HHHHHHHHHHhCCCCCEEEEc
Confidence 2111 12468998877
No 381
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=21.13 E-value=1.2e+02 Score=26.89 Aligned_cols=94 Identities=12% Similarity=0.086 Sum_probs=48.9
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCCC
Q 016441 24 NHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTRK 102 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~~ 102 (389)
..+||++| ..| --.+|++.+ ..+..|++++..... + ..++.++ ..|.++......+-..+
T Consensus 3 ~~~ilVtG-aG~-iG~~l~~~L~~~g~~V~~~~r~~~~---------------~-~~~~~~~-~~Dl~d~~~~~~~~~~~ 63 (286)
T 3gpi_A 3 LSKILIAG-CGD-LGLELARRLTAQGHEVTGLRRSAQP---------------M-PAGVQTL-IADVTRPDTLASIVHLR 63 (286)
T ss_dssp CCCEEEEC-CSH-HHHHHHHHHHHTTCCEEEEECTTSC---------------C-CTTCCEE-ECCTTCGGGCTTGGGGC
T ss_pred CCcEEEEC-CCH-HHHHHHHHHHHCCCEEEEEeCCccc---------------c-ccCCceE-EccCCChHHHHHhhcCC
Confidence 46899999 655 344555443 235689988876432 1 2455554 45766654433222346
Q ss_pred cceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhH
Q 016441 103 FDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSS 140 (389)
Q Consensus 103 FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~ 140 (389)
+|.||.+-.... .+....++.|-......++.|.
T Consensus 64 ~d~vih~a~~~~----~~~~~~~~~n~~~~~~ll~a~~ 97 (286)
T 3gpi_A 64 PEILVYCVAASE----YSDEHYRLSYVEGLRNTLSALE 97 (286)
T ss_dssp CSEEEECHHHHH----HC-----CCSHHHHHHHHHHTT
T ss_pred CCEEEEeCCCCC----CCHHHHHHHHHHHHHHHHHHHh
Confidence 999987643221 1112223334444555555555
No 382
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=21.07 E-value=3.3e+02 Score=24.25 Aligned_cols=121 Identities=12% Similarity=0.059 Sum_probs=60.2
Q ss_pred CCCeEEEEecCCh---hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeccccCCCCCCCCc
Q 016441 23 SNHQILLVGEGDF---SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCI-LHGVDATTMELHPDL 98 (389)
Q Consensus 23 s~~rILLVGEGDF---SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~V-lfgVDATkL~~~~~L 98 (389)
+++++|+.|=+.+ ..++.|++. +.+|+.+...+.+.+ ++..+++++.|..+ .+.+|.++......+
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~---G~~Vv~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~ 95 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASD---GFTVVINYAGKAAAA-------EEVAGKIEAAGGKALTAQADVSDPAAVRRL 95 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHH---TCEEEEEESSCSHHH-------HHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEcCCCHHHH-------HHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 3567899986653 344444443 467777644433322 23345566666544 467888876543211
Q ss_pred ------CCCCcceEEEcCCCCCCCCCc-----cchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEe
Q 016441 99 ------RTRKFDRIIFNFPHAGFYGKE-----DNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSH 153 (389)
Q Consensus 99 ------k~~~FDrIIFNFPH~G~~gkE-----D~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTL 153 (389)
...+.|.+|.|==-......+ +-.+.+..|-.=.....+.+.+.++.+|.|...-
T Consensus 96 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 96 FATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp HHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 114789888773221111111 1222333342222233444555566677776554
No 383
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=21.05 E-value=2.3e+02 Score=25.31 Aligned_cols=76 Identities=12% Similarity=0.216 Sum_probs=41.9
Q ss_pred CCCeEEEEecC---Ch--hHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeccccCCCCCCC
Q 016441 23 SNHQILLVGEG---DF--SFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKK-LGTCILHGVDATTMELHP 96 (389)
Q Consensus 23 s~~rILLVGEG---DF--SFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~-~Gv~VlfgVDATkL~~~~ 96 (389)
++++||+.|=+ .. ..++.|++. +.+|++++.+.. + .+.+++|++ .|....+.+|.++.....
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~---G~~V~~~~r~~~--~-------~~~~~~l~~~~~~~~~~~~Dl~~~~~v~ 87 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHRE---GAQLAFTYATPK--L-------EKRVREIAKGFGSDLVVKCDVSLDEDIK 87 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHT---TCEEEEEESSGG--G-------HHHHHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHc---CCEEEEEeCCHH--H-------HHHHHHHHHhcCCeEEEEcCCCCHHHHH
Confidence 35679999964 32 333344432 567888877642 1 223344433 233345677888754321
Q ss_pred Cc------CCCCcceEEEcC
Q 016441 97 DL------RTRKFDRIIFNF 110 (389)
Q Consensus 97 ~L------k~~~FDrIIFNF 110 (389)
.+ +..+.|.||.|=
T Consensus 88 ~~~~~~~~~~g~iD~lv~~A 107 (285)
T 2p91_A 88 NLKKFLEENWGSLDIIVHSI 107 (285)
T ss_dssp HHHHHHHHHTSCCCEEEECC
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 11 124789988874
No 384
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=20.59 E-value=2.5e+02 Score=24.37 Aligned_cols=108 Identities=11% Similarity=0.084 Sum_probs=50.4
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCc-EEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeccccCCC-CCCCCc-
Q 016441 24 NHQILLVGEGDFSFSLCLALAF-GSASN-ICASSLDSYDDVIQKYKRAKSNLDNLKKLGTC-ILHGVDATTM-ELHPDL- 98 (389)
Q Consensus 24 ~~rILLVGEGDFSFSlSLa~~~-gs~~n-LvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~-VlfgVDATkL-~~~~~L- 98 (389)
+++||++|=+. -.-+++++.+ ..+.. |++++.+...+. .+.+..+.. +.. ..+.+|.++. .....+
T Consensus 5 ~k~vlVtGas~-gIG~~~a~~l~~~G~~~v~~~~r~~~~~~-------~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~ 75 (254)
T 1sby_A 5 NKNVIFVAALG-GIGLDTSRELVKRNLKNFVILDRVENPTA-------LAELKAINP-KVNITFHTYDVTVPVAESKKLL 75 (254)
T ss_dssp TCEEEEETTTS-HHHHHHHHHHHHTCCSEEEEEESSCCHHH-------HHHHHHHCT-TSEEEEEECCTTSCHHHHHHHH
T ss_pred CcEEEEECCCC-hHHHHHHHHHHHCCCcEEEEEecCchHHH-------HHHHHHhCC-CceEEEEEEecCCChHHHHHHH
Confidence 56799998654 2345555444 12444 777776643211 112222211 333 3466788875 321111
Q ss_pred C-----CCCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcc
Q 016441 99 R-----TRKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGML 143 (389)
Q Consensus 99 k-----~~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL 143 (389)
+ ....|.||.|= |....++-.+.+..|-.=.....+.+.+.+
T Consensus 76 ~~~~~~~g~id~lv~~A---g~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 122 (254)
T 1sby_A 76 KKIFDQLKTVDILINGA---GILDDHQIERTIAINFTGLVNTTTAILDFW 122 (254)
T ss_dssp HHHHHHHSCCCEEEECC---CCCCTTCHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCEEEECC---ccCCHHHHhhhheeeehhHHHHHHHHHHHH
Confidence 1 14689888763 322233334444444322233334444444
No 385
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=20.42 E-value=76 Score=29.77 Aligned_cols=96 Identities=20% Similarity=0.261 Sum_probs=55.7
Q ss_pred CeEEEEecCChh-HH-HHHH-HHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeccccCCCCCCCCcCCC
Q 016441 25 HQILLVGEGDFS-FS-LCLA-LAFGSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGTCILHGVDATTMELHPDLRTR 101 (389)
Q Consensus 25 ~rILLVGEGDFS-FS-lSLa-~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv~VlfgVDATkL~~~~~Lk~~ 101 (389)
++||++|=|..- ++ ..|| ++.| ..+|+||+-+.+.. ..++.++++|+... ..+...+.+-..+ ..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~G-a~~Vi~~~~~~~~~---------~~~~~~~~lGa~~v-~~~~~~~~~i~~~-~g 241 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKG-YENLYCLGRRDRPD---------PTIDIIEELDATYV-DSRQTPVEDVPDV-YE 241 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTC-CCEEEEEECCCSSC---------HHHHHHHHTTCEEE-ETTTSCGGGHHHH-SC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcC-CcEEEEEeCCcccH---------HHHHHHHHcCCccc-CCCccCHHHHHHh-CC
Confidence 899999987643 44 5567 6664 33499998754200 13445677898766 4332222110011 23
Q ss_pred CcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEE
Q 016441 102 KFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVS 152 (389)
Q Consensus 102 ~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVT 152 (389)
.+|.|+=. +|. + ..+..+.++|+++|.|.+.
T Consensus 242 g~Dvvid~---~g~---~--------------~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 242 QMDFIYEA---TGF---P--------------KHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp CEEEEEEC---SCC---H--------------HHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEEC---CCC---h--------------HHHHHHHHHHhcCCEEEEE
Confidence 68887632 342 1 2356677889999987654
No 386
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=20.37 E-value=1.8e+02 Score=26.81 Aligned_cols=79 Identities=11% Similarity=0.127 Sum_probs=45.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC---EEEeccccCCCCCCCCc
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGT---CILHGVDATTMELHPDL 98 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv---~VlfgVDATkL~~~~~L 98 (389)
++++||+.|=+.+ ..++||+.+ ..+.+|++++.+.. . .++..++|++.|. ...+.+|.++......+
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~-~-------~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~ 77 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQD-S-------IDKALATLEAEGSGPEVMGVQLDVASREGFKMA 77 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHH-H-------HHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHH
Confidence 3568999996654 344555443 23568999888742 1 2334455555553 45567888875432211
Q ss_pred ------CCCCcceEEEcC
Q 016441 99 ------RTRKFDRIIFNF 110 (389)
Q Consensus 99 ------k~~~FDrIIFNF 110 (389)
.....|.||.|=
T Consensus 78 ~~~~~~~~g~id~lv~nA 95 (319)
T 3ioy_A 78 ADEVEARFGPVSILCNNA 95 (319)
T ss_dssp HHHHHHHTCCEEEEEECC
T ss_pred HHHHHHhCCCCCEEEECC
Confidence 124689888773
No 387
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=20.24 E-value=37 Score=33.74 Aligned_cols=36 Identities=17% Similarity=0.249 Sum_probs=30.5
Q ss_pred cchHHHHHhHHH--HHHHHHhhHhcccCCCeEEEEecC
Q 016441 120 DNHLLIEMHRSL--VRDFFRNSSGMLRDGGEVHVSHKT 155 (389)
Q Consensus 120 D~~r~Ir~nr~L--L~~FF~SA~~lL~~~GeIHVTLk~ 155 (389)
-|--.|.-|++| |..++..|..+|++||++.|-.+-
T Consensus 239 FQALRI~VN~EL~~L~~~L~~a~~~L~~gGRl~VISFH 276 (347)
T 3tka_A 239 FQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFH 276 (347)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecC
Confidence 355567789988 999999999999999999988654
No 388
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=20.21 E-value=94 Score=31.09 Aligned_cols=82 Identities=17% Similarity=0.011 Sum_probs=50.4
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH--HhCCCEEEeccccCCCCCCCCcCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAFGSASNICASSLDSYDDVIQKYKRAKSNLDNL--KKLGTCILHGVDATTMELHPDLRT 100 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~L--r~~Gv~VlfgVDATkL~~~~~Lk~ 100 (389)
.+.+||=+|=|-=.++.+|++. +..++|.-.| .++.+ -++.|++.+ .-..++++ .-|+.+.-. .+..
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s--~~~l~---~Ar~N~~~~~~gl~~i~~i-~~Da~~~L~--~~~~ 161 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK---ASQGIYIERN--DETAV---AARHNIPLLLNEGKDVNIL-TGDFKEYLP--LIKT 161 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT---CSEEEEEESC--HHHHH---HHHHHHHHHSCTTCEEEEE-ESCGGGSHH--HHHH
T ss_pred CCCEEEEeCCCchHHHHHHHhc---CCEEEEEECC--HHHHH---HHHHhHHHhccCCCcEEEE-ECcHHHhhh--hccC
Confidence 4789998888877788888875 3456665544 33333 377788766 22224443 447665311 0123
Q ss_pred CCcceEEEcCCCCCC
Q 016441 101 RKFDRIIFNFPHAGF 115 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~ 115 (389)
..||.|+.|-|--+.
T Consensus 162 ~~fDvV~lDPPrr~~ 176 (410)
T 3ll7_A 162 FHPDYIYVDPARRSG 176 (410)
T ss_dssp HCCSEEEECCEEC--
T ss_pred CCceEEEECCCCcCC
Confidence 579999999998774
No 389
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=20.18 E-value=4e+02 Score=22.61 Aligned_cols=137 Identities=11% Similarity=0.023 Sum_probs=70.7
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC-EEEeccccCCCCCCCCcCC
Q 016441 23 SNHQILLVGEGDFSFSLCLALAF-GSASNICASSLDSYDDVIQKYKRAKSNLDNLKKLGT-CILHGVDATTMELHPDLRT 100 (389)
Q Consensus 23 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDSeeeL~~KY~~A~~Ni~~Lr~~Gv-~VlfgVDATkL~~~~~Lk~ 100 (389)
++++||+.|=..|- -.+|++.+ ..+.+|++++.+... ++.|++.++ .+ +..|.+ ..... .-
T Consensus 20 ~~~~ilVtGatG~i-G~~l~~~L~~~G~~V~~~~R~~~~------------~~~~~~~~~~~~-~~~Dl~--~~~~~-~~ 82 (236)
T 3e8x_A 20 QGMRVLVVGANGKV-ARYLLSELKNKGHEPVAMVRNEEQ------------GPELRERGASDI-VVANLE--EDFSH-AF 82 (236)
T ss_dssp -CCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESSGGG------------HHHHHHTTCSEE-EECCTT--SCCGG-GG
T ss_pred CCCeEEEECCCChH-HHHHHHHHHhCCCeEEEEECChHH------------HHHHHhCCCceE-EEcccH--HHHHH-HH
Confidence 46789999975543 22333322 235689998876431 234555677 54 456776 21111 12
Q ss_pred CCcceEEEcCCCCCCCCCccchHHHHHhHHHHHHHHHhhHhcccCCCeEEEEecCCC--------C---C--CcccHHHH
Q 016441 101 RKFDRIIFNFPHAGFYGKEDNHLLIEMHRSLVRDFFRNSSGMLRDGGEVHVSHKTTV--------P---F--SNWNIKEL 167 (389)
Q Consensus 101 ~~FDrIIFNFPH~G~~gkED~~r~Ir~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~--------P---Y--~sWnIe~L 167 (389)
...|.||.|-.-.. .++-...++.|-.-...+++.|.+. ..+.|...---+. | | ..|.++.+
T Consensus 83 ~~~D~vi~~ag~~~---~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~ 157 (236)
T 3e8x_A 83 ASIDAVVFAAGSGP---HTGADKTILIDLWGAIKTIQEAEKR--GIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDE 157 (236)
T ss_dssp TTCSEEEECCCCCT---TSCHHHHHHTTTHHHHHHHHHHHHH--TCCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHH
T ss_pred cCCCEEEECCCCCC---CCCccccchhhHHHHHHHHHHHHHc--CCCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHH
Confidence 46899998765333 2333444455544444444444331 2244443222221 1 1 23566666
Q ss_pred HhhCCcEEEEEeeC
Q 016441 168 AIGSSLSLIWCSEF 181 (389)
Q Consensus 168 Aa~aGL~L~~~~~F 181 (389)
.+..|+.+.-.+|.
T Consensus 158 ~~~~gi~~~~lrpg 171 (236)
T 3e8x_A 158 LKRSSLDYTIVRPG 171 (236)
T ss_dssp HHHSSSEEEEEEEC
T ss_pred HHHCCCCEEEEeCC
Confidence 67777776665543
No 390
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=20.00 E-value=46 Score=27.89 Aligned_cols=33 Identities=15% Similarity=0.268 Sum_probs=21.4
Q ss_pred CeEEEEecCChhHHHHHHHHhCCCCcEEeccccC
Q 016441 25 HQILLVGEGDFSFSLCLALAFGSASNICASSLDS 58 (389)
Q Consensus 25 ~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS 58 (389)
.+||+.|=+.+ .-.+|++.+..+.+|++++.+.
T Consensus 4 M~vlVtGasg~-iG~~~~~~l~~g~~V~~~~r~~ 36 (202)
T 3d7l_A 4 MKILLIGASGT-LGSAVKERLEKKAEVITAGRHS 36 (202)
T ss_dssp CEEEEETTTSH-HHHHHHHHHTTTSEEEEEESSS
T ss_pred cEEEEEcCCcH-HHHHHHHHHHCCCeEEEEecCc
Confidence 47999996654 3445555443457888887764
Done!