BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016443
(389 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q91VY9|ZN622_MOUSE Zinc finger protein 622 OS=Mus musculus GN=Znf622 PE=2 SV=1
Length = 476
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 183/450 (40%), Gaps = 94/450 (20%)
Query: 13 KQVAGVPGVTEALFLAR---QAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS 69
++VA + VT F R Q A+A+ + TY C CGK + + A HL SR
Sbjct: 34 RKVAAMAPVTAEGFQERVRAQRAVAEAAEASKGAATY-CTACGKKFATFNAYENHLGSRR 92
Query: 70 H----------------------------------------IMRASQGTSNEEKEKVIIK 89
H I +A + + +K
Sbjct: 93 HAELERKAVRAASRRVELLNAKNLEKGLGADGVDKDAVNAAIQQAIKAQPSTSPKKAPFV 152
Query: 90 P-------------IPLRD-VNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLT 135
P +P RD KPPR + + + + +WE+ + E
Sbjct: 153 PTDECGRAAAGARGVPERDPTEKPPRLQWFEQQAKKLAKQQWEDGEEEGEEEEEDDEDED 212
Query: 136 --------NLNVGSPADDDLEEDDDDGAFEEFDPAC------CFMCDLPHDAIENCMVHM 181
L P +D +D +D A EE P C C ++ + HM
Sbjct: 213 WEDIDSDDGLECEDPGVED--QDAEDAAAEESPPLGAIPITDCLFCSHHSSSLVKNVAHM 270
Query: 182 HKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKRHC 241
K H FFIPD+EYL D KGL+ YLG KV +CL+CN++ F S EAV+ HM K HC
Sbjct: 271 TKVHSFFIPDIEYLSDLKGLIKYLGEKVGVGKICLWCNEKGKSFYSTEAVQAHMNDKSHC 330
Query: 242 KIHFGDGDDEEEAELEEFYDYSSSYMDEDGKQLISSSDMANTVEL----GGGSELIITKR 297
K+ F DGD E +FYD+ SSY D Q + + +T ++ ELI+
Sbjct: 331 KL-FTDGD--AALEFADFYDFRSSYPDYKEGQDPAELEALSTDKILECDDETMELIL--- 384
Query: 298 TDKGTSTKTFGSREYLRYYRQK---PRP-SPANNVAITAALASRYKSMGLATVQTREHMV 353
S G R +RYY+Q+ PR + A N + +Y+++G T ++
Sbjct: 385 ----PSGARVGHRSLMRYYKQRFGLPRAVTVARNQKAVGRVLQQYRALGWMG-STGAALM 439
Query: 354 RMKVIKEMNRTGVEAMRTRVGMKNNIIRNL 383
R + ++ + R + M ++GMKNN + +
Sbjct: 440 RERDMQYVQRMKSKWM-LKIGMKNNATKQM 468
>sp|Q969S3|ZN622_HUMAN Zinc finger protein 622 OS=Homo sapiens GN=ZNF622 PE=1 SV=1
Length = 477
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 117/231 (50%), Gaps = 26/231 (11%)
Query: 164 CFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCH 223
C C ++ + HM K H FFIPD+EYL D KGL+ YLG KV +CL+CN++
Sbjct: 254 CLFCSHHSSSLMKNVAHMTKDHSFFIPDIEYLSDIKGLIKYLGEKVGVGKICLWCNEKGK 313
Query: 224 PFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMD----ED---GKQLIS 276
F S EAV+ HM K HCK+ F DGD E +FYD+ SSY D ED ++L S
Sbjct: 314 SFYSTEAVQAHMNDKSHCKL-FTDGD--AALEFADFYDFRSSYPDHKEGEDPNKAEELPS 370
Query: 277 SSDMANTVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVA----ITA 332
++ E ELI+ S G R +RYY+Q+ S A VA
Sbjct: 371 EKNLEYDDET---MELIL-------PSGARVGHRSLMRYYKQRFGLSRAVAVAKNRKAVG 420
Query: 333 ALASRYKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNL 383
+ +Y+++G T T ++R + ++ + R + M + GMKNN + +
Sbjct: 421 RVLQQYRALGW-TGSTGAALMRERDMQYVQRMKSKWM-LKTGMKNNATKQM 469
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 13 KQVAGVPGVTEALFLAR---QAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS 69
++VA + VT F R Q A+A+E++K + TY C +C K + S A HL SR
Sbjct: 34 RKVASMAPVTAEGFQERVRAQRAVAEEESKGSA--TY-CTVCSKKFASFNAYENHLKSRR 90
Query: 70 HI 71
H+
Sbjct: 91 HV 92
>sp|Q7TM96|ZN622_RAT Zinc finger protein 622 OS=Rattus norvegicus GN=Znf622 PE=2 SV=2
Length = 386
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 63/105 (60%), Gaps = 3/105 (2%)
Query: 164 CFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCH 223
C C ++ + HM K H FFIPD+EYL D KGL+ YLG KV +CL+CN++
Sbjct: 247 CLFCSHHSSSLVKNVAHMTKVHSFFIPDIEYLSDLKGLIKYLGEKVGVGKICLWCNEKGK 306
Query: 224 PFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMD 268
F S EAV+ HM K HCK+ F DGD E +FYD+ SSY D
Sbjct: 307 SFYSTEAVQAHMNDKSHCKL-FTDGD--AALEFADFYDFRSSYPD 348
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 13 KQVAGVPGVTEALFLAR---QAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS 69
++VA + VT F R Q A+A+E++K TY C +C K + + A HL SR
Sbjct: 34 RKVANMAPVTAEGFQERVRAQRAVAEEESKGTA--TY-CTVCSKKFATFNAYENHLKSRR 90
Query: 70 HI---MRASQGTSNEEK---EKVIIKPIPLRDVNK 98
H+ +A Q S + + EK + K + + VNK
Sbjct: 91 HVELEKKAVQAVSRQVEMMNEKNLEKGLGVDSVNK 125
>sp|Q90Y35|ZN622_CHICK Zinc finger protein 622 OS=Gallus gallus GN=ZNF622 PE=2 SV=1
Length = 405
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Query: 164 CFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCH 223
C C + + HM K H FFIPD+EYL D +GL+ YLG K+ +C++CN++
Sbjct: 246 CLFCSHHSRTLMKNVAHMTKVHSFFIPDIEYLVDLRGLIKYLGEKIGVGKICIWCNEKGK 305
Query: 224 PFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMDEDGKQLISSSDMANT 283
F S EAV+ HM K HCK+ F DGD E +FYD+ SSY D Q DM
Sbjct: 306 SFYSTEAVQAHMNDKSHCKL-FTDGD--AALEFADFYDFRSSYPDHKEGQ-----DMEVP 357
Query: 284 VELGGGSEL 292
EL EL
Sbjct: 358 AELPSDREL 366
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 13 KQVAGVPGVTEALFLAR---QAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS 69
++VA +P VT F R Q A+A+E++K TY C +C K + + A HL S+
Sbjct: 34 RKVADMPPVTAENFQERVLAQRAVAEERDK--VTATY-CTVCSKRFSTFNAYENHLKSKK 90
Query: 70 HI---MRASQGTSNEEK---EKVIIKPIPLRDVNK 98
H+ +A Q S + K EK + K + + V+K
Sbjct: 91 HLELEKKAVQAVSKKVKILNEKNLEKGLAVESVDK 125
>sp|O59811|YJVF_SCHPO Zinc finger protein C550.15c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPCC550.15c PE=1 SV=1
Length = 463
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 125/295 (42%), Gaps = 49/295 (16%)
Query: 13 KQVAGVPGVTEALFLARQAALAQ--EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSH 70
++VA +P ++ +F + ++ + E+ + +C +C K + S A + H+ S+ H
Sbjct: 35 RKVASLPPLSAEVFAGKILSIQKQNEEVQKKAEFYQNCEVCNKKFYSEGAYSSHMASKKH 94
Query: 71 IMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEA 130
S+ N IK + D + + E DS E+ +E L S+
Sbjct: 95 RDNLSKFQRNSR-----IKKLQSEDASSIASSTLSMGEPVVDS-----EIEEEEDLASQL 144
Query: 131 TN---SLTNLNV-----------------------------GSPADDDLEEDDDDGAFEE 158
T+ SL+NL++ P +++E + + +
Sbjct: 145 TSRAISLSNLSLHGRESEPSKTELATSIPQSNEASKSHLFTQEPTPEEIEAELARRSSQR 204
Query: 159 FDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYC 218
P C C + + C HM H +IP+ EYL D L YL K+ F CL C
Sbjct: 205 LSPRDCLFCAASFSSFDTCKKHMKASHSLYIPEREYLVDEPSLFDYLAEKISIGFTCLTC 264
Query: 219 NDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMDEDGKQ 273
N F SLEAVR HM+ K H I + D E+ EL +FYD+++SY D KQ
Sbjct: 265 N---REFKSLEAVRAHMQQKGHTSIAYDTED--EQLELSDFYDFTTSYPDYAVKQ 314
>sp|P38344|REI1_YEAST Pre-60S factor REI1 OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=REI1 PE=1 SV=3
Length = 393
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 38/213 (17%)
Query: 164 CFMCDLPHDA----IENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCN 219
C C+ H+ +E + HM + HGF+IP+ +YL D GL+ Y+ K+ +C+ CN
Sbjct: 164 CLFCE--HNKHFKDVEENLEHMFRTHGFYIPEQKYLVDKIGLVKYMSEKIGLGNICIVCN 221
Query: 220 DRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYM---------DED 270
+ +L AVR+HM AKRHCKI + D E E+ EFYD++SSY +ED
Sbjct: 222 ---YQGRTLTAVRQHMLAKRHCKIPYESED--ERLEISEFYDFTSSYANFNSNTTPDNED 276
Query: 271 GKQLISS-------SDMANTVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRP- 322
+ + S D+ G EL + T K G R RYY+Q +P
Sbjct: 277 DWEDVGSDEAGSDDEDLPQEYLYNDGIELHLP------TGIKV-GHRSLQRYYKQDLKPE 329
Query: 323 ---SPANNVAITAALASRYKSMGLATVQTREHM 352
+ + A S + VQT++ +
Sbjct: 330 VILTEGQGTLVAAETRSFLPAFDKKGVQTQQRV 362
>sp|Q06709|REH1_YEAST Zinc finger protein REH1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=REH1 PE=1 SV=1
Length = 432
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 105/250 (42%), Gaps = 48/250 (19%)
Query: 146 DLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYL 205
D+ + D E+ C C + +E + HM HG FIP+ YL D GLL +L
Sbjct: 170 DIADKPSDKENEKITITECIYCGKDNKEVERNVKHMFSEHGLFIPERSYLIDLNGLLEFL 229
Query: 206 GLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDY--- 262
+ D CL CN + LE++R HM +KRHC++ + EE FYD+
Sbjct: 230 IKMIVIDHNCLCCN---FHGSGLESIRAHMASKRHCRLPY--ETKEERQLFAPFYDFTYD 284
Query: 263 ------------------SSSYM----DEDGK---QLISSSDMAN----TVELG-GGSEL 292
SS Y +EDG+ L+SS + N TV + G EL
Sbjct: 285 DHSISKNLQNDRAITSKLSSVYGAKNDEEDGEVDITLVSSENDINANYTTVSIDESGLEL 344
Query: 293 IITKRTDKGTSTKTFGSREYLRYYRQK--PRPSPANNVAITAALASRYKSMGLATVQTRE 350
+ + G R RYYRQ +P+P N T A R G+ Q ++
Sbjct: 345 TL-------PTGARLGHRAGQRYYRQNLPSQPNP-NESRRTITAADRRMVSGVTEKQYKK 396
Query: 351 HMVRMKVIKE 360
M +M+ +++
Sbjct: 397 GMKKMQQLEK 406
>sp|Q9NRM2|ZN277_HUMAN Zinc finger protein 277 OS=Homo sapiens GN=ZNF277 PE=2 SV=2
Length = 450
Score = 35.8 bits (81), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 9/100 (9%)
Query: 146 DLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYL 205
D +EDD E A C C+ + IE VHM H F D+ +K GL Y
Sbjct: 286 DHQEDDWSDWEEHPASAVCLFCEKQAETIEKLYVHMEDAHEF---DLLKIKSELGLNFYQ 342
Query: 206 GLK----VKRDFMCLYCNDRCH-PFNSLEAVRKHMEAKRH 240
+K ++R C CH F S +R HME +H
Sbjct: 343 QVKLVNFIRRQVHQCRCYG-CHVKFKSKADLRTHMEETKH 381
>sp|Q8SUH6|ZA15_ENCCU Zinc finger C2H2 protein ECU10_0150 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=ECU10_0150 PE=4 SV=1
Length = 388
Score = 35.4 bits (80), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 46 YSCGLCGKGYRSSKALAQHLNSR--SHIMRASQGTSNEEK 83
Y CG CGK + S K + H N++ + I R +G N +K
Sbjct: 299 YKCGFCGKAFESEKFIFNHFNNKHENEIRRIEKGIENFKK 338
>sp|O60281|ZN292_HUMAN Zinc finger protein 292 OS=Homo sapiens GN=ZNF292 PE=1 SV=3
Length = 2723
Score = 35.4 bits (80), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 31/202 (15%)
Query: 46 YSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREA 105
YSC +C K + S + H+ H+ ++S KE++ PLR + +PP+
Sbjct: 569 YSCPICAKNFNSKETFVPHVT--LHVKQSS-------KERLAAMK-PLRRLGRPPKITTT 618
Query: 106 NNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEEFDPACC- 164
N + ++ + E+ + NSL + + D+D +D++D + ++P
Sbjct: 619 NENQKTNTVAKQEQRPIKK-------NSLYSTDFIVFNDNDGSDDENDDKDKSYEPEVIP 671
Query: 165 FMCDLPHDAIENCMVHMHKCHGF-----FIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCN 219
+P + NC V K GF I V+ KD + +L ++ K+ +C YC
Sbjct: 672 VQKPVPVNEF-NCPVTFCK-KGFKYFKNLIAHVKGHKDNEDAKRFLEMQSKK-VICQYC- 727
Query: 220 DRCHPFNSLEAVRKHMEAKRHC 241
R H F S+ + H++ HC
Sbjct: 728 -RRH-FVSVTHLNDHLQM--HC 745
>sp|Q28889|KIT_FELCA Mast/stem cell growth factor receptor Kit OS=Felis catus GN=KIT
PE=2 SV=1
Length = 978
Score = 35.4 bits (80), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 15/75 (20%)
Query: 160 DPACCFMCDLP------HDAIENCMV--------HMHKCHGFFIP-DVEYLKDPKGLLTY 204
DPA F+ DLP HD + C + + C G +P D+ ++ DPK +T
Sbjct: 113 DPAKLFLVDLPLYGKEDHDTLVRCPLTDPEVTNYSLRGCEGKPLPKDLTFVTDPKAGITI 172
Query: 205 LGLKVKRDFMCLYCN 219
+K + +CL+C+
Sbjct: 173 RNVKREYHRLCLHCS 187
>sp|Q9LHS9|RBE_ARATH Probable transcriptional regulator RABBIT EARS OS=Arabidopsis
thaliana GN=RBE PE=2 SV=2
Length = 226
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 43 PMTYSCGLCGKGYRSSKALAQHLN 66
P +YSC CG+ ++S++AL H+N
Sbjct: 52 PRSYSCSFCGREFKSAQALGGHMN 75
>sp|Q9YLS4|POLG_AEVCA Genome polyprotein OS=Avian encephalomyelitis virus (strain Calnek
vaccine) PE=2 SV=1
Length = 2134
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%)
Query: 131 TNSLTNLNVGSPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIP 190
T+S T +N DD+L E+ +F+E + A C C + I +C K G ++
Sbjct: 738 TSSKTVMNTYWLDDDELVEESSHSSFDEIEEAQCSKCKMDLGDIVSCSGEKAKHFGVYVG 797
Query: 191 DVEYLKDPKGLLTYLGLKVK 210
D DP+G T +K K
Sbjct: 798 DGVVHVDPEGNATNWFMKRK 817
>sp|Q8TF47|ZFP90_HUMAN Zinc finger protein 90 homolog OS=Homo sapiens GN=ZFP90 PE=2 SV=2
Length = 636
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 31 AALAQEKNKNATPMTYSCGLCGKGYRSSKALAQH 64
++L Q +N + Y C LCGK ++ S +L QH
Sbjct: 295 SSLGQHENAHTGEKPYQCSLCGKAFQRSSSLVQH 328
>sp|Q4V8A8|ZFP90_RAT Zinc finger protein 90 OS=Rattus norvegicus GN=Zfp90 PE=2 SV=1
Length = 633
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 31 AALAQEKNKNATPMTYSCGLCGKGYRSSKALAQH 64
++L Q +N + Y C LCGK ++ S +L QH
Sbjct: 292 SSLGQHENAHTGEKPYQCSLCGKAFQRSSSLVQH 325
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 27 LARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQH 64
R ++L Q + + Y C LCG+ +R S +L QH
Sbjct: 316 FQRSSSLVQHQRIHTGEKPYRCNLCGRSFRHSTSLTQH 353
>sp|Q61967|ZFP90_MOUSE Zinc finger protein 90 OS=Mus musculus GN=Zfp90 PE=2 SV=1
Length = 636
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 31 AALAQEKNKNATPMTYSCGLCGKGYRSSKALAQH 64
++L Q +N + Y C LCGK ++ S +L QH
Sbjct: 291 SSLGQHENAHTGEKPYQCSLCGKAFQRSSSLVQH 324
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 27 LARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQH 64
R ++L Q + + Y C LCG+ +R S +L QH
Sbjct: 315 FQRSSSLVQHQRIHTGEKPYRCNLCGRSFRHSTSLTQH 352
>sp|Q6R325|POLG_AEVVR Genome polyprotein OS=Avian encephalomyelitis virus (strain Van
Reokel) PE=3 SV=1
Length = 2134
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%)
Query: 131 TNSLTNLNVGSPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIP 190
T+S T +N DD+L E+ +F+E + A C C + I +C K G ++
Sbjct: 738 TSSKTVMNTYWLDDDELVEESSHFSFDEIEEAQCSKCKIDLGDIVSCSGEKAKHFGVYVG 797
Query: 191 DVEYLKDPKGLLTYLGLKVK 210
D DP+G T +K K
Sbjct: 798 DGVVHVDPEGNATSWFMKRK 817
>sp|Q6P280|ZN529_HUMAN Zinc finger protein 529 OS=Homo sapiens GN=ZNF529 PE=2 SV=1
Length = 530
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 26 FLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQH 64
F +AL Q + ++ Y C +CGK +R S AL +H
Sbjct: 425 FFRLTSALIQHQRIHSGEKPYECKVCGKAFRHSSALTEH 463
>sp|Q7ZXR7|UB10B_XENLA Ubiquitin carboxyl-terminal hydrolase 10-B OS=Xenopus laevis
GN=usp10-b PE=2 SV=1
Length = 805
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 104 EANNEESEDSDDEWEEVGP 122
E N EE E SD+EWE+VGP
Sbjct: 574 EVNKEEQEGSDEEWEQVGP 592
>sp|P53863|JJJ1_YEAST J protein JJJ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=JJJ1 PE=1 SV=1
Length = 590
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 38 NKNATPMTYSCGLCGKGYRSSKALAQHLNSRSH 70
+K + Y C +C K ++S K L H+N++ H
Sbjct: 330 DKEGEVLIYECFICNKTFKSEKQLKNHINTKLH 362
>sp|Q2NL57|UB10A_XENLA Ubiquitin carboxyl-terminal hydrolase 10-A OS=Xenopus laevis
GN=usp10-a PE=2 SV=1
Length = 791
Score = 33.1 bits (74), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 104 EANNEESEDSDDEWEEVGP 122
E N EE E SD+EWE+VGP
Sbjct: 560 EVNKEEQEGSDEEWEQVGP 578
>sp|Q6DIJ4|UBP10_XENTR Ubiquitin carboxyl-terminal hydrolase 10 OS=Xenopus tropicalis
GN=usp10 PE=2 SV=1
Length = 805
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 102 KREANNEESEDSDDEWEEVGP 122
K E N +E E SD+EWE+VGP
Sbjct: 572 KEEINKDEQEGSDEEWEQVGP 592
>sp|Q6WQ42|POLG_AEVL2 Genome polyprotein OS=Avian encephalomyelitis virus (strain L2Z)
PE=3 SV=1
Length = 2134
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%)
Query: 131 TNSLTNLNVGSPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIP 190
T+S T +N DD+L E+ +F+E + A C C + I C K G ++
Sbjct: 738 TSSKTVMNTYWLDDDELVEESSHSSFDEIEEAQCSKCKMDLGDIVICSGEKAKHFGVYVG 797
Query: 191 DVEYLKDPKGLLTYLGLKVK 210
D DP+G T +K K
Sbjct: 798 DGVVHVDPEGNATNWFMKRK 817
>sp|Q9Z2U2|ZN292_MOUSE Zinc finger protein 292 OS=Mus musculus GN=Zfp292 PE=2 SV=2
Length = 2698
Score = 32.7 bits (73), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 31/203 (15%)
Query: 46 YSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREA 105
YSC +C K + S + H+ H+ ++S KE++ PLR + +PP+
Sbjct: 567 YSCPICAKNFNSKDSFVPHVT--LHVKQSS-------KERLAAMK-PLRRLGRPPKITAT 616
Query: 106 N-NEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEEFDPACC 164
+ N+++ + +E P + NSL + + D+D +D++D + ++P
Sbjct: 617 HENQKTNINTVAKQEQRPIK------KNSLYSTDFIVFNDNDGSDDENDDKDKSYEPEVI 670
Query: 165 -FMCDLPHDAIENCMVHMHKCHGF-----FIPDVEYLKDPKGLLTYLGLKVKRDFMCLYC 218
+P + NC V K GF I V+ KD + +L ++ K+ +C YC
Sbjct: 671 PVQKPVPVNEF-NCPVTFCK-KGFKYFKNLIAHVKGHKDSEDAKRFLEMQSKK-VICQYC 727
Query: 219 NDRCHPFNSLEAVRKHMEAKRHC 241
R H F S+ + H++ HC
Sbjct: 728 --RRH-FVSVTHLNDHLQM--HC 745
>sp|Q9BRP0|OVOL2_HUMAN Transcription factor Ovo-like 2 OS=Homo sapiens GN=OVOL2 PE=1 SV=1
Length = 275
Score = 32.7 bits (73), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 28 ARQAALAQEKNKNAT-----PMTYSCGLCGKGYRSSKALAQHLNSRSHIMR 73
+Q +A+ K K T + +SC LCGKG+R + L +HL + + R
Sbjct: 96 TKQRPVARSKIKFTTGTCSDSVVHSCDLCGKGFRLQRMLNRHLKCHNQVKR 146
>sp|Q96LX8|ZN597_HUMAN Zinc finger protein 597 OS=Homo sapiens GN=ZNF597 PE=2 SV=1
Length = 424
Score = 32.3 bits (72), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 64/168 (38%), Gaps = 31/168 (18%)
Query: 29 RQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVII 88
+ + L++ N + Y+C +CG+G+ LAQH +SH + ++N +K
Sbjct: 223 QHSHLSRHMNSHVKEKPYTCSICGRGFMWLPGLAQH--QKSHSAENTYESTNCDKH---- 276
Query: 89 KPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLE 148
N+ P A EE+ S +++ + SL D+D E
Sbjct: 277 -------FNEKPNL--ALPEETFVSGPQYQHTK----CMKSFRQSLYPALSEKSHDEDSE 323
Query: 149 EDDDDG----AFEEFDPACCFMCDLPHDAIENCMVHM--------HKC 184
DDG +F +F P C CD+ + H HKC
Sbjct: 324 RCSDDGDNFFSFSKFKPLQCPDCDMTFPCFSELISHQNIHTEERPHKC 371
>sp|Q9UL36|ZN236_HUMAN Zinc finger protein 236 OS=Homo sapiens GN=ZNF236 PE=2 SV=2
Length = 1845
Score = 32.3 bits (72), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 23 EALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS 69
E L L Q + E N++ + +Y C C KG++ S L QH+ S +
Sbjct: 944 EELDLQAQGSQFLEDNEDQSRRSYRCDYCNKGFKKSSHLKQHVRSHT 990
>sp|Q9C8N5|STOP1_ARATH Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana
GN=STOP1 PE=2 SV=1
Length = 499
Score = 32.3 bits (72), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Query: 19 PGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGT 78
PG E L L ++ LA P T+ C +CGKG++ L H+ + +
Sbjct: 225 PGSYEILQLEKEEILA--------PHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAAL 276
Query: 79 SNEEKEKV 86
+ KE V
Sbjct: 277 AKPNKESV 284
>sp|Q8BRH4|MLL3_MOUSE Histone-lysine N-methyltransferase MLL3 OS=Mus musculus GN=Mll3
PE=2 SV=2
Length = 4903
Score = 32.0 bits (71), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Query: 153 DGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRD 212
D +++ D C F H ++ M+H + C + +L+ K L ++K D
Sbjct: 456 DTCYQQQDNLCPFCGKCYHPELQKDMLHCNMCKRWV-----HLECDKPTDQELDSQLKED 510
Query: 213 FMCLYCN------DRCHPFNSLE 229
++C+YC D HP N +E
Sbjct: 511 YICMYCKHLGAEIDPLHPGNEVE 533
>sp|P36508|ZNF76_HUMAN Zinc finger protein 76 OS=Homo sapiens GN=ZNF76 PE=2 SV=2
Length = 570
Score = 32.0 bits (71), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 46 YSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRK 102
Y+C CGK YR + LA H S + A++ + E+ ++ + + PP++
Sbjct: 345 YTCSTCGKTYRQTSTLAMHKRSAHGELEATEESEQALYEQQQLEAASAAEESPPPKR 401
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,577,385
Number of Sequences: 539616
Number of extensions: 6766001
Number of successful extensions: 40331
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 172
Number of HSP's that attempted gapping in prelim test: 39121
Number of HSP's gapped (non-prelim): 1165
length of query: 389
length of database: 191,569,459
effective HSP length: 119
effective length of query: 270
effective length of database: 127,355,155
effective search space: 34385891850
effective search space used: 34385891850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)