Query 016445
Match_columns 389
No_of_seqs 234 out of 1064
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 13:42:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016445.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016445hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zx3_A Ectonucleoside triphosp 100.0 3.3E-74 1.1E-78 588.3 25.5 301 71-384 26-345 (452)
2 3cj1_A Ectonucleoside triphosp 100.0 8.1E-68 2.8E-72 543.5 22.3 293 74-383 29-350 (456)
3 3aap_A Ectonucleoside triphosp 100.0 6.8E-59 2.3E-63 463.8 16.6 257 78-383 2-269 (353)
4 4a57_A Nucleoside-triphosphata 100.0 7.3E-54 2.5E-58 437.9 16.1 234 74-312 35-342 (611)
5 1t6c_A Exopolyphosphatase; alp 99.9 8.6E-23 2.9E-27 200.4 13.9 143 80-240 13-157 (315)
6 3cer_A Possible exopolyphospha 99.9 1.8E-22 6E-27 200.4 15.4 153 73-240 10-165 (343)
7 3mdq_A Exopolyphosphatase; str 99.9 2.9E-21 1E-25 189.4 15.4 144 81-241 6-151 (315)
8 3hi0_A Putative exopolyphospha 99.8 3.8E-20 1.3E-24 192.4 13.8 144 79-241 15-160 (508)
9 1u6z_A Exopolyphosphatase; alp 99.8 3.9E-20 1.3E-24 192.5 13.5 143 80-240 12-156 (513)
10 3h1q_A Ethanolamine utilizatio 98.5 1.1E-06 3.6E-11 82.6 12.8 134 75-240 24-158 (272)
11 2ych_A Competence protein PILM 96.2 0.06 2.1E-06 52.4 13.7 57 80-139 14-72 (377)
12 3qfu_A 78 kDa glucose-regulate 95.8 0.33 1.1E-05 47.1 16.7 119 129-281 135-254 (394)
13 4gni_A Putative heat shock pro 95.4 0.19 6.6E-06 49.4 13.4 121 129-281 132-253 (409)
14 4a2a_A Cell division protein F 94.7 0.08 2.7E-06 53.2 8.6 78 78-160 7-86 (419)
15 4b9q_A Chaperone protein DNAK; 94.3 0.77 2.6E-05 48.1 15.4 124 129-282 117-241 (605)
16 3i33_A Heat shock-related 70 k 94.2 1.2 4E-05 43.5 15.6 121 129-281 140-262 (404)
17 2fxu_A Alpha-actin-1, actin, a 93.0 0.84 2.9E-05 44.5 12.2 105 131-259 81-186 (375)
18 2v7y_A Chaperone protein DNAK; 93.0 1.2 4.1E-05 45.4 13.8 93 125-239 86-179 (509)
19 1k8k_A ARP3, actin-like protei 91.4 0.91 3.1E-05 44.8 10.2 111 131-257 88-199 (418)
20 3qb0_A Actin-related protein 4 90.5 2.4 8.1E-05 43.6 12.6 104 130-256 93-197 (498)
21 4ehu_A Activator of 2-hydroxyi 88.8 3.2 0.00011 38.2 11.1 110 80-239 2-111 (276)
22 1hux_A Activator of (R)-2-hydr 82.7 8.7 0.0003 35.7 10.8 111 80-240 4-115 (270)
23 3ezw_A Glycerol kinase; glycer 79.6 3 0.0001 42.7 6.9 59 77-139 2-63 (526)
24 1yuw_A Heat shock cognate 71 k 76.0 21 0.00071 36.6 12.0 91 129-239 121-211 (554)
25 1jce_A ROD shape-determining p 73.0 16 0.00056 34.4 9.7 91 128-240 76-166 (344)
26 1dkg_D Molecular chaperone DNA 72.6 16 0.00056 34.9 9.7 91 129-240 117-207 (383)
27 3d2f_A Heat shock protein homo 71.7 66 0.0022 33.9 14.8 121 129-281 120-245 (675)
28 4apw_A ALP12; actin-like prote 71.3 43 0.0015 31.7 12.3 49 220-283 171-219 (329)
29 2kho_A Heat shock protein 70; 67.7 20 0.00068 37.3 9.7 91 129-240 117-207 (605)
30 3ifr_A Carbohydrate kinase, FG 66.6 8.4 0.00029 39.2 6.4 60 77-140 5-67 (508)
31 3ll3_A Gluconate kinase; xylul 64.5 18 0.00061 36.7 8.3 61 78-142 3-66 (504)
32 3l0q_A Xylulose kinase; xlylul 63.9 6.7 0.00023 40.3 5.1 59 78-140 4-65 (554)
33 2p3r_A Glycerol kinase; glycer 62.8 16 0.00056 37.0 7.7 61 78-142 2-65 (510)
34 3h6e_A Carbohydrate kinase, FG 58.1 7.4 0.00025 39.5 4.1 58 78-139 5-64 (482)
35 3h3n_X Glycerol kinase; ATP-bi 57.8 21 0.00073 36.1 7.5 58 78-139 4-64 (506)
36 3hz6_A Xylulokinase; xylulose, 57.2 18 0.00063 36.6 6.9 59 78-140 4-65 (511)
37 3jvp_A Ribulokinase; PSI-II, N 54.8 17 0.00059 37.4 6.3 25 78-102 4-28 (572)
38 3g25_A Glycerol kinase; IDP007 53.7 24 0.00083 35.6 7.1 59 79-141 6-67 (501)
39 3zyy_X Iron-sulfur cluster bin 51.6 19 0.00065 38.0 6.0 27 76-102 203-229 (631)
40 2fsj_A Hypothetical protein TA 49.3 14 0.0005 35.3 4.4 19 221-239 190-208 (346)
41 2w40_A Glycerol kinase, putati 48.9 28 0.00097 35.0 6.7 58 78-139 3-63 (503)
42 3i8b_A Xylulose kinase; strain 48.9 24 0.00082 35.9 6.2 56 78-139 4-59 (515)
43 4am6_A Actin-like protein ARP8 47.8 65 0.0022 34.1 9.3 109 127-257 194-306 (655)
44 4e1j_A Glycerol kinase; struct 47.8 31 0.001 35.1 6.8 59 79-141 26-87 (520)
45 2dpn_A Glycerol kinase; thermu 47.8 38 0.0013 34.0 7.4 59 79-141 2-63 (495)
46 3dwl_A Actin-related protein 3 44.8 53 0.0018 32.6 7.8 39 221-259 179-217 (427)
47 4fo0_A Actin-related protein 8 44.0 66 0.0022 32.7 8.7 104 130-256 175-281 (593)
48 2uyt_A Rhamnulokinase; rhamnos 42.7 41 0.0014 33.6 6.7 63 78-141 3-69 (489)
49 2zf5_O Glycerol kinase; hypert 41.0 42 0.0014 33.7 6.5 58 79-140 3-63 (497)
50 4bc3_A Xylulose kinase; transf 40.8 17 0.00057 37.2 3.5 22 76-97 7-28 (538)
51 1zc6_A Probable N-acetylglucos 40.4 81 0.0028 29.1 8.0 77 79-163 11-88 (305)
52 2ch5_A NAGK protein; transfera 39.4 1.1E+02 0.0038 28.4 8.9 91 80-180 7-98 (347)
53 2d4w_A Glycerol kinase; alpha 37.2 63 0.0021 32.5 7.1 59 79-141 2-63 (504)
54 3js6_A Uncharacterized PARM pr 33.7 21 0.00073 34.5 2.8 48 221-283 184-231 (355)
55 1k8k_B ARP2, actin-like protei 33.6 17 0.00057 35.5 2.0 39 221-259 152-190 (394)
56 2d0o_A DIOL dehydratase-reacti 32.8 27 0.00093 36.4 3.5 21 223-243 409-429 (610)
57 1nbw_A Glycerol dehydratase re 32.3 27 0.00094 36.4 3.4 21 223-243 411-431 (607)
58 2yvc_D Neprilysin; protein-pep 31.1 19 0.00064 21.4 1.1 24 9-41 2-25 (26)
59 2itm_A Xylulose kinase, xylulo 26.4 76 0.0026 31.6 5.5 58 81-142 2-62 (484)
60 2zgy_A Plasmid segregation pro 20.3 56 0.0019 30.5 2.9 20 221-240 164-183 (320)
No 1
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=100.00 E-value=3.3e-74 Score=588.30 Aligned_cols=301 Identities=30% Similarity=0.549 Sum_probs=257.6
Q ss_pred CCCCCCCceEEEEEEeCCCceEEEEEEEeCCC----CceeeccceeecC-CCCcccCCCcchHHHHHHHHHHHHHHhCCC
Q 016445 71 PSFPPSSVKYGVLLDGGSTGTRIHVFSYDTET----NHFDFDLGSMRLN-PGLSSYAVNPTNAGDSLKDLLDFAKRKVPP 145 (389)
Q Consensus 71 ~~~~~~~~~y~vVIDaGSsgtRl~Vy~~~~~~----~~l~~~~~~~k~~-pGLss~~~~~~~a~~~l~~Ll~~a~~~vp~ 145 (389)
..+.++..+|+|||||||||||||||+|..++ +.+. +...+|+. ||||+|+++|+++.++|++|+++|++.||.
T Consensus 26 ~~~~~~~~~y~iviDaGSsgtRl~VY~~~~~~~~~~~~~~-~~~~~k~~gpGlSs~~~~p~~~~~~l~~Ll~~a~~~vp~ 104 (452)
T 3zx3_A 26 NKPLPENVKYGIVLDAGSSHTNLYIYKWPAEKENDTGVVQ-QLEECQVKGPGISKYAQKTDEIAAYLAECMKMSTERIPA 104 (452)
T ss_dssp ------CEEEEEEEEECSSCEEEEEEEEECCCTTCCCCCE-EEEEEECSSSCGGGGTTCGGGHHHHHHHHHHHHHHHSCH
T ss_pred cccCCCCceEEEEEEcCCCCcEEEEEEEeCCcCCCccccc-eeeeecccCCChhccCCCHHHHHHHHHHHHHHHHHhCCH
Confidence 44556778999999999999999999998732 1222 45578894 999999999999999999999999999999
Q ss_pred CCCCCceEEEEEehhhcccch---hcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHHHHhcccCCCCCCCc
Q 016445 146 AFWADTEIRLMATAGLRLVDV---VVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSET 222 (389)
Q Consensus 146 ~~~~~tpv~l~ATAGmR~l~~---~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~WlavNy~lg~l~~~~~~t 222 (389)
+.|++|||+++||||||+|+. +++++||++|++.+++++|.|. +|+||||+|||+|+|+|+||++|+|..+..++
T Consensus 105 ~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~--~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t 182 (452)
T 3zx3_A 105 SKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQ--GAKIITGQEEGAYGWITINYLLGRFKTPGGST 182 (452)
T ss_dssp HHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEE--EEEECCHHHHHHHHHHHHHHHTTTTC---CCC
T ss_pred HHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCC--ceEECCchhhhhhhHHHHHhhhccccCCCCCc
Confidence 999999999999999999984 4789999999999998899886 49999999999999999999999987654578
Q ss_pred eeEEeeCCCeeEEEeecCCC--CCccceeeEEecceeEEEEEeecccccHHHHHHHHHHHhhcCCcchhhhhccCCccCC
Q 016445 223 TGIIELGGASVQVTFVSDEP--LPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQKGTYID 300 (389)
Q Consensus 223 ~giiDlGGaStQIaf~~~~~--~~~~~~~~~~l~~~~~~lYs~SfLg~G~~~ar~~~~~~l~~~~~~~~~~~~~~~~~~~ 300 (389)
+|+||||||||||+|.+++. ..+++...++++|++|+||+|||||||+|+||+++++.+.+. ..++.+.|
T Consensus 183 ~g~lDlGGgStQi~f~~~~~~~~~~~~~~~l~l~g~~y~lYthSyLgyG~~~Ar~r~l~~l~~~--------~~~~~~~~ 254 (452)
T 3zx3_A 183 FGALDLGGASTQITFVPLNSTLEAPETSLQFRLYGTDYTVYTHSFLCYGKDQALWQKLAQDIQV--------SSGGILKD 254 (452)
T ss_dssp CEEEEECSSEEEEEECCSSCCSSSGGGEEEEEETTEEEEEEEEEEETCSHHHHHHHHHHHHCCT--------TSSSEEEE
T ss_pred eEEEecCCCceEEEeccCCCccCCCCceEEEEECCEEEEEEEEehhhccHHHHHHHHHHHHhcc--------cCCCcccC
Confidence 99999999999999998865 345667889999999999999999999999999999988762 12356889
Q ss_pred CCCCCCceeeee-----cCCCccccc----cceeeeccCCChHhHHHHHHHhhccCCCCCCCCCCCCCCccCCCCCCcee
Q 016445 301 PCSPKGYLHHVE-----SSPGSLAAK----IDLSTLQAGGNFSECRSAALTLLQNGKEKCSYKSCYLGSTFMPKLRGKFL 371 (389)
Q Consensus 301 PC~p~Gy~~~~~-----~~~~~~~~~----~~~~~~~Gtgnf~~C~~~i~~ll~~~~~~C~~~~Cs~~g~~~P~l~g~F~ 371 (389)
||+|+||+..++ .++|+...+ ...+++.|+|||++|+++++++|+. +.|.+++|+|||+|||+++|+|+
T Consensus 255 PC~p~Gy~~~~~~~~~~~spc~~~~~~~~~~~~~~~~Gtg~~~~C~~~v~~ll~~--~~C~~~~CsfnGv~qP~~~~~F~ 332 (452)
T 3zx3_A 255 PCFYPGYKKVVNVSELYGTPCTKRFEKKLPFNQFQVQGTGDYEQCHQSILKIFNN--SHCPYSQCAFNGVFLPPLQGSFG 332 (452)
T ss_dssp TTSCTTCEEEEEHHHHTTSGGGGGGCCCCSCSEEEEEECCCHHHHHHHHHTTSCC--SCCSSSSBSSTTCBCCCCCSCEE
T ss_pred CCCCCCCeeEEeecccccccccccccccCCCceeEEeccCCHHHHHHHHHHHhcc--CcCCCCCcccCccccCCCCCceE
Confidence 999999999876 344543211 2347889999999999999999985 68999999999999999999999
Q ss_pred EeeeeEEeeeccc
Q 016445 372 ATENFFHTSKVSF 384 (389)
Q Consensus 372 a~s~fy~t~~f~~ 384 (389)
|||+|||+++|+.
T Consensus 333 a~S~fy~~~~~l~ 345 (452)
T 3zx3_A 333 AFSAFYFVMDFFK 345 (452)
T ss_dssp EEEHHHHHHHHHH
T ss_pred EEEEeeeehhhhC
Confidence 9999999999874
No 2
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=100.00 E-value=8.1e-68 Score=543.47 Aligned_cols=293 Identities=32% Similarity=0.565 Sum_probs=252.2
Q ss_pred CCCCceEEEEEEeCCCceEEEEEEEeCCC----Cceeeccceeec-CCCCcccCCCcchHHHHHHHHHHHHHHhCCCCCC
Q 016445 74 PPSSVKYGVLLDGGSTGTRIHVFSYDTET----NHFDFDLGSMRL-NPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFW 148 (389)
Q Consensus 74 ~~~~~~y~vVIDaGSsgtRl~Vy~~~~~~----~~l~~~~~~~k~-~pGLss~~~~~~~a~~~l~~Ll~~a~~~vp~~~~ 148 (389)
.+...+|++||||||||+||+||+|..+. +.+. +...+++ +|||++|+.+|+++.++|.+|+++|++.||.+.+
T Consensus 29 ~~~~~~y~~vID~GSns~Rl~Vy~~~~~~~~~~~~~~-~~~~~~~~~~Gls~~~~~pe~~~~~l~~Ll~~a~~~iP~~~~ 107 (456)
T 3cj1_A 29 EPPALKYGIVLDAGSSHTSMFVYKWPADKENDTGIVG-QHSSCDVQGGGISSYANDPSKAGQSLVRCLEQALRDVPRDRH 107 (456)
T ss_dssp --CCEEEEEEEEECSSCEEEEEEEEETTSTTSTTCCE-EEEEEECSSSCGGGGTTSTHHHHHHTHHHHHHHHHHSCHHHH
T ss_pred CCCCceEEEEEEcCCCCeEEEEEEEcCCCCCCcccee-eeeeeeecccccccccCCHHHHHHHHHHHHHHHHHhCCHHHc
Confidence 45677999999999999999999998642 1222 3445688 8999999999999999999999999999999999
Q ss_pred CCceEEEEEehhhcccch---hcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHHHHhcccCCC--------
Q 016445 149 ADTEIRLMATAGLRLVDV---VVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGG-------- 217 (389)
Q Consensus 149 ~~tpv~l~ATAGmR~l~~---~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~WlavNy~lg~l~~-------- 217 (389)
+.|||+++||||||+|+. +|+++||++|++.++++||.|. +|+||||+|||+|+|+||||++|.+.+
T Consensus 108 ~~t~v~~~ATAgmR~a~~~~~~n~~~~L~~v~~~l~~~~f~~~--~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~ 185 (456)
T 3cj1_A 108 ASTPLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFR--GARILSGQDEGVFGWVTANYLLENFIKYGWVGRWI 185 (456)
T ss_dssp TTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHTTSSSEEE--EEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEEC
T ss_pred CCceEEEEeeHHHhhCccccHHHHHHHHHHHHHHHhhCCCCcC--ceEEcCchHHhhhhHHHHHhhhccccccccccccc
Confidence 999999999999999973 5899999999999988888654 699999999999999999999998732
Q ss_pred -CCCCceeEEeeCCCeeEEEeecCCCC-CccceeeEEecceeEEEEEeecccccHHHHHHHHHHHhhcCCcchhhhhccC
Q 016445 218 -DPSETTGIIELGGASVQVTFVSDEPL-PQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQK 295 (389)
Q Consensus 218 -~~~~t~giiDlGGaStQIaf~~~~~~-~~~~~~~~~l~~~~~~lYs~SfLg~G~~~ar~~~~~~l~~~~~~~~~~~~~~ 295 (389)
...++.|+||||||||||+|.+++.. .+++...++++|++|+||+|||||||+++||+++++.+.+
T Consensus 186 ~~~~~t~gvlDlGGgStqi~~~~~~~~~~~~~~~~l~l~g~~y~lY~hS~LgyG~~~Ar~~~l~~l~~------------ 253 (456)
T 3cj1_A 186 RPRKGTLGAMDLGGASTQITFETTSPSEDPGNEVHLRLYGQHYRVYTHSFLCYGRDQILLRLLASALQ------------ 253 (456)
T ss_dssp SSCCCCCEEEEECSSEEEEEEECCSCCSCGGGEEEEEETTEEEEEEEEEEETCSHHHHHHHHHHHHHH------------
T ss_pred ccCCCceEEEEcCCCceEEEeccCCccCCCCceEEEEeCCeeEEEEEEecccchHHHHHHHHHHHHhc------------
Confidence 11467899999999999999987653 4577789999999999999999999999999999988763
Q ss_pred CccCCCCCCCCceeeee-----cCCCcccc------ccceeeeccCCChHhHHHHHHHhhccCCCCCCCCCCCCCCccCC
Q 016445 296 GTYIDPCSPKGYLHHVE-----SSPGSLAA------KIDLSTLQAGGNFSECRSAALTLLQNGKEKCSYKSCYLGSTFMP 364 (389)
Q Consensus 296 ~~~~~PC~p~Gy~~~~~-----~~~~~~~~------~~~~~~~~Gtgnf~~C~~~i~~ll~~~~~~C~~~~Cs~~g~~~P 364 (389)
..+.|||+|+||+..++ .++|+... ....+++.|+|||++|+++++++|+. +.|.+++|+|||+|||
T Consensus 254 ~~~~~PC~p~G~~~~~~~~~~~~~~c~~~~~~~~y~~~~~~~~~Gtg~~~~C~~~v~~ll~~--~~C~~~~Csf~gv~~P 331 (456)
T 3cj1_A 254 IHRFHPCWPKGYSTQVLLQEVYQSPCTMGQRPRAFNGSAIVSLSGTSNATLCRDLVSRLFNI--SSCPFSQCSFNGVFQP 331 (456)
T ss_dssp HTSSEEEEEETCEEEEEHHHHHSSTTTTTC-------CCEEEEEECCCHHHHHHHHHTTCCC--SCCSSSSBSSTTCBCC
T ss_pred ccCCCCCcCCCCeeeeeecccccCcccccccccccCCCceeEeecCCCHHHHHHHHHHHhcc--CcCCCcccccCCccCC
Confidence 25789999999999876 23443221 11237889999999999999999985 5799999999999999
Q ss_pred CCCCceeEeeeeEEeeecc
Q 016445 365 KLRGKFLATENFFHTSKVS 383 (389)
Q Consensus 365 ~l~g~F~a~s~fy~t~~f~ 383 (389)
+++|+|+|+|+|||+++|+
T Consensus 332 ~~~~~f~a~S~fy~~~~~l 350 (456)
T 3cj1_A 332 PVAGNFIAFSAFYYTVDFL 350 (456)
T ss_dssp CCCSCEEEEHHHHHHHHHH
T ss_pred CCCCcEEEEEehHhhHHHh
Confidence 9999999999999999887
No 3
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=100.00 E-value=6.8e-59 Score=463.78 Aligned_cols=257 Identities=26% Similarity=0.427 Sum_probs=217.8
Q ss_pred ceEEEEEEeCCCceEEEEEEEeCCC-C-ceee-ccceeecCCCCcccCCCcchHHHHHHHHHHHHHHhCCCCCCCCceEE
Q 016445 78 VKYGVLLDGGSTGTRIHVFSYDTET-N-HFDF-DLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFWADTEIR 154 (389)
Q Consensus 78 ~~y~vVIDaGSsgtRl~Vy~~~~~~-~-~l~~-~~~~~k~~pGLss~~~~~~~a~~~l~~Ll~~a~~~vp~~~~~~tpv~ 154 (389)
.+|.+|||+||||+||+||+|..+. . .++. +....|+.|||++|.++|+++.+.|. +++. .+.++.+||+
T Consensus 2 ~~~~avID~GSns~Rl~I~~~~~~~~~~~i~~~~~~~~k~~~gLs~~~~~~~~~~~~l~---~f~~----~~~~~~~~v~ 74 (353)
T 3aap_A 2 HSCIAVIDAGSTGSRLHIYSYDTDDTNTPIHIEEIWNKKIKPGFASIQPNSVTIDAYLT---MLLA----DAPIHNIPVY 74 (353)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEECTTSCEEEEEEEEEEEESSCGGGSCCSHHHHHHHHH---HHHT----TCSCCSEEEE
T ss_pred CCEEEEEEcCCCCeEEEEEEEcCCCCCceeEeeeeeeeccCCChhhcCCCHHHHHHHHH---HHHH----HHhcCCCcEE
Confidence 3678999999999999999998632 2 2221 12237899999999999988888877 4444 4778999999
Q ss_pred EEEehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHHHHhcccCCCCCCCceeEEeeCCCeeE
Q 016445 155 LMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQ 234 (389)
Q Consensus 155 l~ATAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~WlavNy~lg~l~~~~~~t~giiDlGGaStQ 234 (389)
++||||||+++.+++++||++|++.+++++| |.+.+|+||||+|||+|+|+||||+++.+..+..++.++|||||||||
T Consensus 75 ~~ATaa~R~a~n~~~~~~l~~v~~~~~~~~~-~~g~~v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGSte 153 (353)
T 3aap_A 75 FYATAGMRLLPQSQQKKYYDELEYWFRQQSQ-WQLVEAKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQ 153 (353)
T ss_dssp EEECHHHHTSCHHHHHHHHHHHHHHHHTCSS-EEEEEEEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEE
T ss_pred EEecHHHhcCcHHHHHHHHHHHHHHHhhCCC-CCCCeEEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceE
Confidence 9999999999877799999999999998888 888899999999999999999999999887544467999999999999
Q ss_pred EEeecCC--CCCccceeeEEecceeEEEEEeecccccHHHHHHHHHHHhhcCCcchhhhhccCCccCCCCCCCCceeeee
Q 016445 235 VTFVSDE--PLPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQKGTYIDPCSPKGYLHHVE 312 (389)
Q Consensus 235 Iaf~~~~--~~~~~~~~~~~l~~~~~~lYs~SfLg~G~~~ar~~~~~~l~~~~~~~~~~~~~~~~~~~PC~p~Gy~~~~~ 312 (389)
|+|..++ .....+...+++++++|+||+|||||||+++||+++++ .|||+|+||+ ...
T Consensus 154 i~~~~~~~~~~~~~~~~sl~lG~~~~~ly~~S~Lg~G~~~ar~~~~~-------------------~~PC~~~G~~-~~~ 213 (353)
T 3aap_A 154 IVFPMPKNAEISKHNQVELNIYGQNINLYVHSFLGLGQTEMSHQFLN-------------------SPSCFANDYP-LPD 213 (353)
T ss_dssp EEEECCCCTTSCGGGEEEEEETTEEEEEEEEEEETCSHHHHHTTTTT-------------------CGGGSCBTCB-CTT
T ss_pred EEEecCCccccCCCceEEEEECCcceeeeeecchhccHHHHHHHHhc-------------------CCCCCCCCCC-ccc
Confidence 9998553 22223457899999999999999999999999987753 4899999999 211
Q ss_pred cCCCccccccceeeeccCCChHhHHHHHHHhhccCCCCCCCCCCCCCCccCCCC----CCceeEeeeeEEee--ecc
Q 016445 313 SSPGSLAAKIDLSTLQAGGNFSECRSAALTLLQNGKEKCSYKSCYLGSTFMPKL----RGKFLATENFFHTS--KVS 383 (389)
Q Consensus 313 ~~~~~~~~~~~~~~~~Gtgnf~~C~~~i~~ll~~~~~~C~~~~Cs~~g~~~P~l----~g~F~a~s~fy~t~--~f~ 383 (389)
.+.|+|||++|+++++.+|+ ++|+|+|+|||++ +++|+|+|+|||++ +|+
T Consensus 214 -------------g~~g~g~~~~C~~~~~~ll~--------~~c~f~gv~~p~~~~~~~~~f~~~S~f~~~~~~~~~ 269 (353)
T 3aap_A 214 -------------GESGQGNAPSCKEEVTSLMN--------SVHKVNQQIQPLLALNPVNEWYSIGGISNLASSQLF 269 (353)
T ss_dssp -------------SCBCCCCHHHHHHHHHHHHH--------HTSCHHHHHHHHHHHSCCSEEEEEETHHHHHTSTTC
T ss_pred -------------CccCCCCHHHHHHHHHHHhc--------CccccCcccCCccccCCCCcEEEEEEEEeeechhhc
Confidence 15799999999999999997 4799999999997 68999999999988 776
No 4
>4a57_A Nucleoside-triphosphatase 1; hydrolase; 2.00A {Toxoplasma gondii} PDB: 4a59_A* 4a5a_A* 4a5b_A 3agr_A
Probab=100.00 E-value=7.3e-54 Score=437.94 Aligned_cols=234 Identities=27% Similarity=0.371 Sum_probs=188.1
Q ss_pred CCCCceEEEEEEeCCCceEEEEEEEeCC----CCceeeccceeecCCC-------------CcccCC-----Ccch----
Q 016445 74 PPSSVKYGVLLDGGSTGTRIHVFSYDTE----TNHFDFDLGSMRLNPG-------------LSSYAV-----NPTN---- 127 (389)
Q Consensus 74 ~~~~~~y~vVIDaGSsgtRl~Vy~~~~~----~~~l~~~~~~~k~~pG-------------Lss~~~-----~~~~---- 127 (389)
.+...++.||||+|||+||..||.+... ....-.+....-+.+| |+.|+. .|.+
T Consensus 35 c~~~~qa~v~id~gss~t~~~~f~~~t~~~p~~~r~vlp~~~~~~~~g~~~~~~r~~le~wld~~a~~~wesr~~~s~~~ 114 (611)
T 4a57_A 35 CHDSLQALVVIDAGSSSTRTNVFLAKTRSCPNKGRSIDPDSIQLIGAGKRFAGLRVVLEEWLDTYAGKDWESRPVDARLL 114 (611)
T ss_dssp CEEEEEEEEEEEECSSCEEEEEEEEEEEEETTTEEEECGGGCEEEEECCCBCCHHHHHHHHHHHHTCTTTTTSCCCGGGG
T ss_pred ccccceEEEEEeCCCCCcceeeEEEeecCCCCcceeeCcchhhhhhCCcccccHHHHHHHHHHHhcCCCcccCccchHHH
Confidence 3345789999999999999999998761 1111011112223333 666665 2222
Q ss_pred -----------------HHHHHHHHHHHHHHhCCCCCCCC--ceEEEEEehhhcccchhcHHHHHHHHHHHhhcc----C
Q 016445 128 -----------------AGDSLKDLLDFAKRKVPPAFWAD--TEIRLMATAGLRLVDVVVQDKILDSCRRVLRVS----G 184 (389)
Q Consensus 128 -----------------a~~~l~~Ll~~a~~~vp~~~~~~--tpv~l~ATAGmR~l~~~~~~~il~~vr~~l~~s----~ 184 (389)
..+.|.+||++|++.||+++|++ |||+|+||||||+||.+++++||+.|++.|+++ +
T Consensus 115 ~~~~p~m~~~a~~~~~~l~~~I~pLLd~A~~~VPk~~~k~~~TPV~L~ATAGMRLLp~~kqd~IL~aVr~~L~~sp~~~g 194 (611)
T 4a57_A 115 FQYVPQMHEGAKKLMQLLEEDTVAILDSQLNEKQKVQVKALGIPVMLCSTAGVRDFHEWYRDALFVLLRHLINNPSPAHG 194 (611)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCEEEEEEECTTSTTCCTTHHHHHHHHHHHHHTSCCGGGC
T ss_pred HhhChhHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHcccCCCcEEEEeeeecccCCHHHHHHHHHHHHHHHhcCCcccC
Confidence 35679999999999999999999 999999999999999999999999999999875 3
Q ss_pred --ccccCCceEEcCCccchhhhHHHHHHhcccCCCC--------------CCCceeEEeeCCCeeEEEeecCCCC-Cccc
Q 016445 185 --FRFADDWATVITGSDEGVYAWIVANYALGTLGGD--------------PSETTGIIELGGASVQVTFVSDEPL-PQEF 247 (389)
Q Consensus 185 --f~f~~~~i~VIsG~eEg~y~WlavNy~lg~l~~~--------------~~~t~giiDlGGaStQIaf~~~~~~-~~~~ 247 (389)
|.+.++||+||||+|||+|+||++||++|+|..+ ..+|+|+||||||||||+|++++.. .+++
T Consensus 195 F~F~~~~~~vrIIsG~EEGvYgWITvNYLLG~f~~~~~~~~~~~~~~~~~~~~TvG~LDLGGASTQIaF~p~~~~~~P~~ 274 (611)
T 4a57_A 195 YKFFTNPFWTRPITGAEEGLFAFITLNHLSRRLGEDPARCMIDEYGVKQCRNDLAGVVEVGGASAQIVFPLQEGTVLPSS 274 (611)
T ss_dssp CCEECCTTTSEECCHHHHHHHHHHHHHHHTTCCSSSCSEEEECTTSCEEEECCCCEEEEECSSCEEEEEECCTTCCCCTT
T ss_pred cccccCCCceeecCCccceeeEeeehhhhhccccccccccccccccccCCCCceeEEEeeCCceEEEEeccCcccCCCCc
Confidence 5557899999999999999999999999999642 2478999999999999999987643 3467
Q ss_pred eeeEEeccee--------EEEEEeecccccHHHHHHHHHHHhhcCCcchhhhhccCCccCCCCCCCCceeeee
Q 016445 248 SRTLKFGNVT--------YNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQKGTYIDPCSPKGYLHHVE 312 (389)
Q Consensus 248 ~~~~~l~~~~--------~~lYs~SfLg~G~~~ar~~~~~~l~~~~~~~~~~~~~~~~~~~PC~p~Gy~~~~~ 312 (389)
...+++++.+ |+||+|||||||+|+||+++++.+.+.. +...++.+.|||+|+||+..++
T Consensus 275 ~~~~~L~g~~~l~~~~~~Y~VYTHSfLGYGlnqAR~r~Lk~L~~~~-----~~~~~~~i~dPCLPkGY~~~~~ 342 (611)
T 4a57_A 275 VRAVNLQRERLLPERYPSADVVSVSFMQLGMASSAGLFLKELCSND-----EFLQGGICSNPCLFKGFQQSCS 342 (611)
T ss_dssp SCCEETTTTTSSCTTSCCCEEEEEEEGGGSHHHHHHHHHHHHTTST-----TTEETTEEEETTSCBTCEEESS
T ss_pred ceEEEEcCcccccCCccceEEEEEechhhhHHHHHHHHHHHHhhcc-----ccCCCCcccCCCcCCCCceEEE
Confidence 7788888875 9999999999999999999999987631 1123456889999999998876
No 5
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=99.89 E-value=8.6e-23 Score=200.43 Aligned_cols=143 Identities=19% Similarity=0.278 Sum_probs=113.6
Q ss_pred EEEEEEeCCCceEEEEEEEeCCCC-ceeeccceeecCCCCcccCC-CcchHHHHHHHHHHHHHHhCCCCCCCCceEEEEE
Q 016445 80 YGVLLDGGSTGTRIHVFSYDTETN-HFDFDLGSMRLNPGLSSYAV-NPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMA 157 (389)
Q Consensus 80 y~vVIDaGSsgtRl~Vy~~~~~~~-~l~~~~~~~k~~pGLss~~~-~~~~a~~~l~~Ll~~a~~~vp~~~~~~tpv~l~A 157 (389)
..++||+|||++||+||++..+.. .++......+++.|+..... .++.+.+.+..|.+|++.. +.++.+.|+++|
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~---~~~~v~~i~~vA 89 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKLI---DEFKVERVKAVA 89 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHH---HHTTCSEEEEEE
T ss_pred EEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeecCCCccccCCcCHHHHHHHHHHHHHHHHHH---HHCCCCeEEEEE
Confidence 446899999999999999985322 22223345677788766444 5666677777776666554 557788999999
Q ss_pred ehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHHHHhcccCCCCCCCceeEEeeCCCeeEEEe
Q 016445 158 TAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTF 237 (389)
Q Consensus 158 TAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~WlavNy~lg~l~~~~~~t~giiDlGGaStQIaf 237 (389)
|++||.+ .|+++|++.|++.+ |+. ++||||+|||.|+|+|+.+.++ ...+..++|||||||||++
T Consensus 90 TsA~R~A--~N~~~fl~~v~~~~---G~~-----i~vIsg~eEA~l~~~gv~~~l~-----~~~~~lvvDIGGGStEl~~ 154 (315)
T 1t6c_A 90 TEAIRRA--KNAEEFLERVKREV---GLV-----VEVITPEQEGRYAYLAVAYSLK-----PEGEVCVVDQGGGSTEYVF 154 (315)
T ss_dssp CHHHHTS--TTHHHHHHHHHHHT---CCC-----EEECCHHHHHHHHHHHHHHHTC-----CCSEEEEEEEETTEEEEEE
T ss_pred cHHHHcC--cCHHHHHHHHHHHH---CCC-----EEEcCHHHHHHHHHHHHHhhcc-----cCCCEEEEEeCCCcEEEEE
Confidence 9999996 79999999999875 885 9999999999999999999875 1346789999999999999
Q ss_pred ecC
Q 016445 238 VSD 240 (389)
Q Consensus 238 ~~~ 240 (389)
..+
T Consensus 155 ~~~ 157 (315)
T 1t6c_A 155 GKG 157 (315)
T ss_dssp EET
T ss_pred EeC
Confidence 854
No 6
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=99.88 E-value=1.8e-22 Score=200.40 Aligned_cols=153 Identities=19% Similarity=0.228 Sum_probs=117.6
Q ss_pred CCCCCceEEEEEEeCCCceEEEEEEEeCCC-C-ceeeccceeecCCCCcccCC-CcchHHHHHHHHHHHHHHhCCCCCCC
Q 016445 73 FPPSSVKYGVLLDGGSTGTRIHVFSYDTET-N-HFDFDLGSMRLNPGLSSYAV-NPTNAGDSLKDLLDFAKRKVPPAFWA 149 (389)
Q Consensus 73 ~~~~~~~y~vVIDaGSsgtRl~Vy~~~~~~-~-~l~~~~~~~k~~pGLss~~~-~~~~a~~~l~~Ll~~a~~~vp~~~~~ 149 (389)
-+.+.....++||+|||++||.||++..+. + .++......+++.|+..... .++.+.+.+..|.+|++.. +.++
T Consensus 10 ~~~~~~~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~aL~~f~~~~---~~~~ 86 (343)
T 3cer_A 10 HMSKESVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVI---AEHP 86 (343)
T ss_dssp ----CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHH---TTSC
T ss_pred ccCCCCCeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCCccccCCcCHHHHHHHHHHHHHHHHHH---HHCC
Confidence 333444455799999999999999997432 2 22223345677888876444 5667777788777766655 6678
Q ss_pred CceEEEEEehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHHHHhcccCCCCCCCceeEEeeC
Q 016445 150 DTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELG 229 (389)
Q Consensus 150 ~tpv~l~ATAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~WlavNy~lg~l~~~~~~t~giiDlG 229 (389)
.+.|+++||++||.+ +|+++|++.|++.+ |+. ++||||+|||.|+|+|+.+.++... ......++|||
T Consensus 87 v~~v~~vATsA~R~A--~N~~~fl~~v~~~t---Gi~-----ieVIsG~eEA~l~~~gv~~~~~~~~--~~~~~lviDIG 154 (343)
T 3cer_A 87 IDGLRFVATSATRDA--ENREEFEDEIERIL---GVR-----PEVIPGTEEADLSFLGATSVVNRDD--LPAPYLVVDLG 154 (343)
T ss_dssp CSEEEEEECHHHHHC--TTHHHHHHHHHHHH---SSC-----CEECCHHHHHHHHHHHHHSSCCTTT--CCSSEEEEEEC
T ss_pred CCeEEEEecHHHHcC--cCHHHHHHHHHHHH---CCC-----EEEeCHHHHHHHHHHHHHhhCcccc--ccCCEEEEEeC
Confidence 899999999999996 79999999999987 885 9999999999999999998775311 12457899999
Q ss_pred CCeeEEEeecC
Q 016445 230 GASVQVTFVSD 240 (389)
Q Consensus 230 GaStQIaf~~~ 240 (389)
||||||++...
T Consensus 155 GGStel~~~~~ 165 (343)
T 3cer_A 155 GGSTELVIGGD 165 (343)
T ss_dssp SSCEEEEECCC
T ss_pred CCceEEEEeec
Confidence 99999999865
No 7
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=99.86 E-value=2.9e-21 Score=189.44 Aligned_cols=144 Identities=14% Similarity=0.156 Sum_probs=113.8
Q ss_pred EEEEEeCCCceEEEEEEEeCCCC-ceeeccceeecCCCCcccCC-CcchHHHHHHHHHHHHHHhCCCCCCCCceEEEEEe
Q 016445 81 GVLLDGGSTGTRIHVFSYDTETN-HFDFDLGSMRLNPGLSSYAV-NPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMAT 158 (389)
Q Consensus 81 ~vVIDaGSsgtRl~Vy~~~~~~~-~l~~~~~~~k~~pGLss~~~-~~~~a~~~l~~Ll~~a~~~vp~~~~~~tpv~l~AT 158 (389)
.++||+|||++||.|+++..+.. .++......++..|+..-.. .++.+.+.+..|.+|++.. +.++.+.+.++||
T Consensus 6 ~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~---~~~~v~~v~~vAT 82 (315)
T 3mdq_A 6 IGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKGFITEEAMDRALDTLKKFRVIL---DEHAVVHVIATGT 82 (315)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHHHHH---HHTTCCEEEEEEC
T ss_pred EEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccCCcCHHHHHHHHHHHHHHHHHH---HHcCCCEEEEEee
Confidence 46999999999999999986332 22223345677788765444 5566677777776666554 5677899999999
Q ss_pred hhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHHHHhcccCCCCCCCceeEEeeCCCeeEEEee
Q 016445 159 AGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTFV 238 (389)
Q Consensus 159 AGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~WlavNy~lg~l~~~~~~t~giiDlGGaStQIaf~ 238 (389)
++||.+ .|+++|++.|++.+ |++ ++||||+|||.|.|+|+.+.+.. ......++||||||||+++.
T Consensus 83 sA~R~A--~N~~~fl~~i~~~t---G~~-----i~vIsG~eEA~l~~~gv~~~~~~----~~~~~lviDIGGGStEl~~~ 148 (315)
T 3mdq_A 83 SAVRSG--SNKQVLIDRIKKEV---NID-----VEVIDGAREAELIFRGVQQAVPM----EDHISLAMDIGGGSVEFIIG 148 (315)
T ss_dssp HHHHHC--TTHHHHHHHHHHHH---CCC-----EEECCHHHHHHHHHHHHHHHSCC----TTCCEEEEEECSSCEEEEEE
T ss_pred HHHHcC--cCHHHHHHHHHHHH---CCC-----eEEeCHHHHHHHHHHHHHhcCCC----CCCCEEEEEeCCCceEEEEE
Confidence 999996 79999999999976 885 99999999999999999987642 12457899999999999998
Q ss_pred cCC
Q 016445 239 SDE 241 (389)
Q Consensus 239 ~~~ 241 (389)
.+.
T Consensus 149 ~~~ 151 (315)
T 3mdq_A 149 NKN 151 (315)
T ss_dssp CSS
T ss_pred ECC
Confidence 653
No 8
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=99.82 E-value=3.8e-20 Score=192.37 Aligned_cols=144 Identities=18% Similarity=0.173 Sum_probs=113.3
Q ss_pred eEEEEEEeCCCceEEEEEEEeCCCC-ceeeccceeecCCCCcccCC-CcchHHHHHHHHHHHHHHhCCCCCCCCceEEEE
Q 016445 79 KYGVLLDGGSTGTRIHVFSYDTETN-HFDFDLGSMRLNPGLSSYAV-NPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLM 156 (389)
Q Consensus 79 ~y~vVIDaGSsgtRl~Vy~~~~~~~-~l~~~~~~~k~~pGLss~~~-~~~~a~~~l~~Ll~~a~~~vp~~~~~~tpv~l~ 156 (389)
+..++||+|||+.||.||+...+.. .+......++++.|+..-.. +++.+.+.+..|-+|+... +.++.+.|.++
T Consensus 15 ~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vrLg~gl~~~g~Ls~eai~r~~~~L~~F~~~~---~~~~v~~v~~v 91 (508)
T 3hi0_A 15 APVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGLGKGLALTGRMHEEGVTRALMALRRFHVLS---EQAQAQKLYVL 91 (508)
T ss_dssp CCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHH---HHTTCSEEEEE
T ss_pred CeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEeecccCccccCCcCHHHHHHHHHHHHHHHHHH---HhCCCCeEEEE
Confidence 4446999999999999999876433 22212335677788766544 5666677777776666554 56778899999
Q ss_pred EehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHHHHhcccCCCCCCCceeEEeeCCCeeEEE
Q 016445 157 ATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVT 236 (389)
Q Consensus 157 ATAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~WlavNy~lg~l~~~~~~t~giiDlGGaStQIa 236 (389)
||++||.+ .|+++|++.|++.+ |++ |+||||+|||.|.|+||...+. .....++||||||||++
T Consensus 92 ATsA~R~A--~N~~~fl~~i~~~t---G~~-----ievIsG~EEA~l~~~gv~~~~~------~~~~lvvDIGGGStEl~ 155 (508)
T 3hi0_A 92 ATAAAREA--ENGPDFIREAEAIL---GCE-----IEVLSGEKEALYSAYGVISGFY------QPDGIAGDLGGGSLELI 155 (508)
T ss_dssp ECTHHHHS--TTHHHHHHHHHHHH---TSC-----EEECCHHHHHHHHHHHHHHHSS------SCEEEEEEECSSCEEEE
T ss_pred eeHHHHcC--cCHHHHHHHHHHHH---CCC-----eEEecHHHHHHHHHHHHHhcCC------CCCeEEEEeCCCceEEE
Confidence 99999996 79999999999976 886 9999999999999999988753 23457999999999999
Q ss_pred eecCC
Q 016445 237 FVSDE 241 (389)
Q Consensus 237 f~~~~ 241 (389)
+..+.
T Consensus 156 ~~~~~ 160 (508)
T 3hi0_A 156 DIKDK 160 (508)
T ss_dssp EEETT
T ss_pred EeeCC
Confidence 98754
No 9
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=99.82 E-value=3.9e-20 Score=192.53 Aligned_cols=143 Identities=16% Similarity=0.202 Sum_probs=111.5
Q ss_pred EEEEEEeCCCceEEEEEEEeCCCC-ceeeccceeecCCCCcccCC-CcchHHHHHHHHHHHHHHhCCCCCCCCceEEEEE
Q 016445 80 YGVLLDGGSTGTRIHVFSYDTETN-HFDFDLGSMRLNPGLSSYAV-NPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMA 157 (389)
Q Consensus 80 y~vVIDaGSsgtRl~Vy~~~~~~~-~l~~~~~~~k~~pGLss~~~-~~~~a~~~l~~Ll~~a~~~vp~~~~~~tpv~l~A 157 (389)
..++||+|||++||.||++..+.. .++.....++++.|+..-.. +++.+.+.+..|-+|++.. +.++.+.|.++|
T Consensus 12 ~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~~---~~~~v~~v~~vA 88 (513)
T 1u6z_A 12 EFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERL---QGFSPASVCIVG 88 (513)
T ss_dssp CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHT---TTCCGGGEEEEE
T ss_pred eEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHHH---HhCCCCEEEEEe
Confidence 346999999999999999985332 23222344566677765443 4566677777776665554 667888999999
Q ss_pred ehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHHHHhcccCCCCCCCceeEEeeCCCeeEEEe
Q 016445 158 TAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTF 237 (389)
Q Consensus 158 TAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~WlavNy~lg~l~~~~~~t~giiDlGGaStQIaf 237 (389)
|++||.+ .|+++|++.|++.+ |++ |+||||+|||.|.|+||...+.. .+...++||||||||+++
T Consensus 89 TsA~R~A--~N~~~fl~~i~~~t---G~~-----i~vIsG~eEA~l~~~gv~~~~~~-----~~~~lviDIGGGStEl~~ 153 (513)
T 1u6z_A 89 THTLRQA--LNATDFLKRAEKVI---PYP-----IEIISGNEEARLIFMGVEHTQPE-----KGRKLVIDIGGGSTELVI 153 (513)
T ss_dssp CHHHHHC--TTHHHHHHHHTTTC---SSC-----EEECCHHHHHHHHHHHHHHHSCC-----CSCEEEEEECSSCEEEEE
T ss_pred cHHHHcC--cCHHHHHHHHHHHH---CCC-----EEEeCHHHHHHHHHHHHHhhccC-----CCCEEEEEECCCcEEEEE
Confidence 9999996 79999999999865 885 99999999999999999887642 125789999999999999
Q ss_pred ecC
Q 016445 238 VSD 240 (389)
Q Consensus 238 ~~~ 240 (389)
..+
T Consensus 154 ~~~ 156 (513)
T 1u6z_A 154 GEN 156 (513)
T ss_dssp EET
T ss_pred EeC
Confidence 754
No 10
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=98.49 E-value=1.1e-06 Score=82.62 Aligned_cols=134 Identities=12% Similarity=0.103 Sum_probs=79.4
Q ss_pred CCCceEEEEEEeCCCceEEEEEEEeCCCCceeeccceeecCCCCcc-cCCCcchHHHHHHHHHHHHHHhCCCCCCCCceE
Q 016445 75 PSSVKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSS-YAVNPTNAGDSLKDLLDFAKRKVPPAFWADTEI 153 (389)
Q Consensus 75 ~~~~~y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~~~k~~pGLss-~~~~~~~a~~~l~~Ll~~a~~~vp~~~~~~tpv 153 (389)
+.+.+|.++||+|||++|+.|+. .+...+.. ...+ ..++.. ...+.+.+.+.++.+++.+....+.. ..
T Consensus 24 ~~~~~~~~gIDiGS~s~k~vi~~--~~~~~l~~--~~~~-~~~l~~g~i~d~~~~~~~l~~~~~~~~~~~~~~-----~~ 93 (272)
T 3h1q_A 24 PLPPPYKVGVDLGTADIVLVVTD--QEGIPVAG--ALKW-ASVVKDGLVVDYIGAIQIVRELKAKVERLLGSE-----LF 93 (272)
T ss_dssp CCCSCCEEEEECCSSEEEEEEEC--TTCCEEEE--EEEE-CCCCBTTBCTTHHHHHHHHHHHHHHHHHHSSSC-----CC
T ss_pred CCCCCEEEEEEcccceEEEEEEC--CCCcEEEE--Eeec-ccccCCCEEEcHHHHHHHHHHHHHHHHHhcCCc-----cC
Confidence 34456789999999999999953 22222221 1111 112222 12355777788888888887764322 12
Q ss_pred EEEEehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHHHHhcccCCCCCCCceeEEeeCCCee
Q 016445 154 RLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASV 233 (389)
Q Consensus 154 ~l~ATAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~WlavNy~lg~l~~~~~~t~giiDlGGaSt 233 (389)
.+.+|...+. ..++.++++.+.+. .|++ +.+|.++.||..... | ..+..++|+|||||
T Consensus 94 ~~v~tvp~~~--~~~~~~~~~~~~~~---~g~~-----~~~i~~e~~A~a~~~------~------~~~~~viDiGggst 151 (272)
T 3h1q_A 94 QAATAIPPGT--VGRNAEACGHVVAG---AGLE-----LVTLVDEPVAAARAL------G------INDGIVVDIGGGTT 151 (272)
T ss_dssp EEEEECCSCC-----CTTHHHHHHHH---TTCE-----EEEEECHHHHHHHHH------T------CSSEEEEEECSSCE
T ss_pred eEEEEcCCCC--CHHHHHHHHHHHHH---cCCe-----eeecccHHHHHHHHH------c------CCCEEEEEECCCcE
Confidence 2333333322 24555555554443 4785 899999999874332 2 12458999999999
Q ss_pred EEEeecC
Q 016445 234 QVTFVSD 240 (389)
Q Consensus 234 QIaf~~~ 240 (389)
+++....
T Consensus 152 ~~~~~~~ 158 (272)
T 3h1q_A 152 GIAVIEK 158 (272)
T ss_dssp EEEEEET
T ss_pred EEEEEEC
Confidence 9988754
No 11
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=96.22 E-value=0.06 Score=52.36 Aligned_cols=57 Identities=21% Similarity=0.215 Sum_probs=34.7
Q ss_pred EEEEEEeCCCceEEEEEEEeCCCCceeeccceeecCC-CCcc-cCCCcchHHHHHHHHHHHH
Q 016445 80 YGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNP-GLSS-YAVNPTNAGDSLKDLLDFA 139 (389)
Q Consensus 80 y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~~~k~~p-GLss-~~~~~~~a~~~l~~Ll~~a 139 (389)
..+-||+||+.+++.+.+ .+.+.+.. .....+.. ++.. -..|++.+.+.|+.+++.+
T Consensus 14 ~~vgiDiGt~~i~~~~~~--~~~~~i~~-~g~~~~ps~~~~~g~i~d~~~~~~~ik~~~~~~ 72 (377)
T 2ych_A 14 EALGLEIGASALKLVEVS--GNPPALKA-LASRPTPPGLLMEGMVAEPAALAQEIKELLLEA 72 (377)
T ss_dssp CCEEEEECSSEEEEEEEE--TTTTEEEE-EEEEECCTTSEETTEESCHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCeEEEEEEe--CCceEEEE-EEeEECCCCcccCCCcCCHHHHHHHHHHHHHHc
Confidence 457899999999999985 44443421 11111111 1111 1247888888898888764
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=95.77 E-value=0.33 Score=47.12 Aligned_cols=119 Identities=18% Similarity=0.221 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceEEEEEehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHH
Q 016445 129 GDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVA 208 (389)
Q Consensus 129 ~~~l~~Ll~~a~~~vp~~~~~~tpv~l~ATAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~Wlav 208 (389)
...|+.|.+.|+..+.. ..+.+.+---+.. +..+++.+.+.++. .|+. .+++|+...=+.++
T Consensus 135 a~~l~~l~~~a~~~~~~---~~~~~vitvP~~~---~~~~r~~~~~a~~~----aGl~----~~~li~Ep~Aaa~~---- 196 (394)
T 3qfu_A 135 GMILGKMKQIAEDYLGT---KVTHAVVTVPAYF---NDAQRQATKDAGTI----AGLN----VLRIVNEPTAAAIA---- 196 (394)
T ss_dssp HHHHHHHHHHHHHHHTS---CCCEEEEEECTTC---CHHHHHHHHHHHHH----TTCE----EEEEEEHHHHHHHH----
T ss_pred HHHHHHHHHHHHHhcCC---CcceEEEEECCCC---CHHHHHHHHHHHHH----cCCc----eEEEecCHHHHHHH----
Confidence 34566676777766532 2334444333332 23455555555433 4664 35666533322222
Q ss_pred HHhcccCCCCCCCceeEEeeCCCeeEEEeecCCCCCccceeeEEecceeEEEEEeec-ccccHHHHHHHHHHHh
Q 016445 209 NYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSF-LHFGQNVAFETLRELL 281 (389)
Q Consensus 209 Ny~lg~l~~~~~~t~giiDlGGaStQIaf~~~~~~~~~~~~~~~l~~~~~~lYs~Sf-Lg~G~~~ar~~~~~~l 281 (389)
|.+.. .+...++.++|+|||.+.++..... +..+.+...+. ..+|-+..-+++.+.+
T Consensus 197 -~~~~~--~~~~~~vlV~D~Gggt~dvsv~~~~-------------~~~~~~~~~~~~~~lGG~~~d~~l~~~l 254 (394)
T 3qfu_A 197 -YGLDK--SDKEHQIIVYDLGGGTFDVSLLSIE-------------NGVFEVQATSGDTHLGGEDFDYKIVRQL 254 (394)
T ss_dssp -TTTTS--CSSCEEEEEEEECSSCEEEEEEEEE-------------TTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred -Hhhcc--CCCCceEEEEEcCCCceeEEEEEEe-------------CCEEEEEEEcCCCCCChHHHHHHHHHHH
Confidence 22211 1223567899999999999876432 12233333333 5566666555555444
No 13
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=95.36 E-value=0.19 Score=49.43 Aligned_cols=121 Identities=12% Similarity=0.142 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceEEEEEehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHH
Q 016445 129 GDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVA 208 (389)
Q Consensus 129 ~~~l~~Ll~~a~~~vp~~~~~~tpv~l~ATAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~Wlav 208 (389)
...|+.|.+.|+..+.. ..+.+.+---+..- ..+++.+.+.++. .||. .+++|+..+-+.+++
T Consensus 132 ~~~L~~l~~~a~~~~~~---~~~~~vitvPa~~~---~~~r~~~~~a~~~----AGl~----~~~li~Ep~AAa~~~--- 194 (409)
T 4gni_A 132 TRYLRRLVGAASEYLGK---KVTSAVITIPTNFT---EKQKAALIAAAAA----ADLE----VLQLISEPAAAVLAY--- 194 (409)
T ss_dssp HHHHHHHHHHHHHHHTS---CCCEEEEEECTTCC---HHHHHHHHHHHHH----TTCE----EEEEEEHHHHHHHHT---
T ss_pred HHHHHHHHHHHHHHhCC---CCCeEEEEECCCCC---HHHHHHHHHHHHH----cCCC----eEEEEcCHHHHHHHH---
Confidence 56777787877776522 22344443333332 2445555555544 4774 467776444443333
Q ss_pred HHhcccCCCCCCCceeEEeeCCCeeEEEeecCCCCCccceeeEEecceeEEEEEee-cccccHHHHHHHHHHHh
Q 016445 209 NYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHS-FLHFGQNVAFETLRELL 281 (389)
Q Consensus 209 Ny~lg~l~~~~~~t~giiDlGGaStQIaf~~~~~~~~~~~~~~~l~~~~~~lYs~S-fLg~G~~~ar~~~~~~l 281 (389)
.+..-..+....+.++|+|||.+.++...-. +..+.+-+.+ -..+|-+..-+.+.+.+
T Consensus 195 --~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~-------------~~~~~v~~~~~~~~lGG~~~d~~i~~~l 253 (409)
T 4gni_A 195 --DARPEATISDKIIVVADLGGSRSDVTVLASR-------------SGMYTILATVHDYEYHGIALDKVLIDHF 253 (409)
T ss_dssp --TC------CCEEEEEEEECSSCEEEEEEEEE-------------TTEEEEEEEEEESSSSHHHHHHHHHHHH
T ss_pred --hcccccCCCCCEEEEEECCCCceEEEEEEEe-------------CCeEEEEEecCCCCcCHHHHHHHHHHHH
Confidence 2211000123567899999999999875321 1123333332 24566665555555444
No 14
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=94.72 E-value=0.08 Score=53.20 Aligned_cols=78 Identities=13% Similarity=0.081 Sum_probs=46.9
Q ss_pred ceEEEEEEeCCCceEEEEEEEeCCCCceeeccceeecCCCCcc-cCCCcchHHHHHHHHHHHHHHhCCCCCCCCce-EEE
Q 016445 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSS-YAVNPTNAGDSLKDLLDFAKRKVPPAFWADTE-IRL 155 (389)
Q Consensus 78 ~~y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~~~k~~pGLss-~~~~~~~a~~~l~~Ll~~a~~~vp~~~~~~tp-v~l 155 (389)
..+.+.||+||+.+++.|-+...+...+. ...... ..|+.. -..|.+.+.++|+.+++.|++.... +... |++
T Consensus 7 ~~~ivglDIGts~I~~vv~~~~~~~~~i~-g~~~~~-s~gv~~G~I~di~~~~~~I~~av~~ae~~~g~---~i~~~v~v 81 (419)
T 4a2a_A 7 TVFYTSIDIGSRYIKGLVLGKRDQEWEAL-AFSSVK-SRGLDEGEIKDAIAFKESVNTLLKELEEQLQK---SLRSDFVI 81 (419)
T ss_dssp CCEEEEEEECSSEEEEEEEEC----CEEE-EEEEEE-CCSEETTEESBHHHHHHHHHHHHHHHHHHHTS---CCCSEEEE
T ss_pred CCEEEEEEccCCEEEEEEEEEcCCCCEEE-EEEEec-cCCeeCCEEEcHHHHHHHHHHHHHHHHHHcCC---CcCceEEE
Confidence 45778999999999999998765332221 111111 223322 2347888999999999999776432 2344 555
Q ss_pred EEehh
Q 016445 156 MATAG 160 (389)
Q Consensus 156 ~ATAG 160 (389)
...++
T Consensus 82 ~i~g~ 86 (419)
T 4a2a_A 82 SFSSV 86 (419)
T ss_dssp EECCT
T ss_pred EEcCC
Confidence 55444
No 15
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=94.32 E-value=0.77 Score=48.11 Aligned_cols=124 Identities=18% Similarity=0.269 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceEEEEEehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHH
Q 016445 129 GDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVA 208 (389)
Q Consensus 129 ~~~l~~Ll~~a~~~vp~~~~~~tpv~l~ATAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~Wlav 208 (389)
...|..|.+.|...+.. ..+.+.+---|.. ...+++++.++++. .|+. -+++|+.-.=+.+
T Consensus 117 a~iL~~lk~~ae~~lg~---~v~~~VITVPa~f---~~~qr~a~~~Aa~~----AGl~----v~~li~EP~AAAl----- 177 (605)
T 4b9q_A 117 AEVLKKMKKTAEDYLGE---PVTEAVITVPAYF---NDAQRQATKDAGRI----AGLE----VKRIINEPTAAAL----- 177 (605)
T ss_dssp HHHHHHHHHHHHHHHTS---CCCEEEEEECTTC---CHHHHHHHHHHHHH----TTCE----EEEEEEHHHHHHH-----
T ss_pred HHHHHHHHHHHHHHhCC---CCCeEEEEECCCC---CHHHHHHHHHHHHH----cCCc----eEEEeCcHHHHHH-----
Confidence 34566666666665422 1233333333332 22445554444443 3664 3577754444433
Q ss_pred HHhcccCCCCCCCceeEEeeCCCeeEEEeecCCCCCccceeeEEecceeEEEEEeec-ccccHHHHHHHHHHHhh
Q 016445 209 NYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSF-LHFGQNVAFETLRELLS 282 (389)
Q Consensus 209 Ny~lg~l~~~~~~t~giiDlGGaStQIaf~~~~~~~~~~~~~~~l~~~~~~lYs~Sf-Lg~G~~~ar~~~~~~l~ 282 (389)
.|.+.. .+...++.|+|+|||.+.++...-....+ ...+.+-+.+. ..+|-+..-+++.+++.
T Consensus 178 aygl~~--~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~---------~~~~evla~~gd~~lGG~d~D~~l~~~l~ 241 (605)
T 4b9q_A 178 AYGLDK--GTGNRTIAVYDLGGGAFDISIIEIDEVDG---------EKTFEVLATNGDTHLGGEDFDSRLINYLV 241 (605)
T ss_dssp HHHTTS--CCSSEEEEEEEECSSCEEEEEEEEEESSS---------CEEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred Hhhhhc--cCCCCEEEEEECCCCeEEEEEEEEecCCC---------CceEEEEEecCCCCcChHHHHHHHHHHHH
Confidence 333322 11235678999999999999764321111 12334444443 56777666666655543
No 16
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=94.22 E-value=1.2 Score=43.54 Aligned_cols=121 Identities=16% Similarity=0.189 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceEEEEEehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHH
Q 016445 129 GDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVA 208 (389)
Q Consensus 129 ~~~l~~Ll~~a~~~vp~~~~~~tpv~l~ATAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~Wlav 208 (389)
...|..|.+.|+..+.. ..+.+.+---|.. +..+++.+.++++. .|+. .+++|+..+-+.+++
T Consensus 140 a~~L~~l~~~a~~~~~~---~~~~~vitvPa~~---~~~~r~~~~~a~~~----AGl~----~~~li~Ep~AAa~~~--- 202 (404)
T 3i33_A 140 SMVLTKMKEIAEAYLGG---KVHSAVITVPAYF---NDSQRQATKDAGTI----TGLN----VLRIINEPTAAAIAY--- 202 (404)
T ss_dssp HHHHHHHHHHHHHHHSS---CCCEEEEEECTTC---CHHHHHHHHHHHHH----HTCE----EEEEEEHHHHHHHHT---
T ss_pred HHHHHHHHHHHHHHhcc---CCCcEEEEECCCC---CHHHHHHHHHHHHH----cCCC----eEEEeccHHHHHHHH---
Confidence 34556666666655422 1233433333322 23455555555443 3664 467776554444433
Q ss_pred HHhcccCCC-CCCCceeEEeeCCCeeEEEeecCCCCCccceeeEEecceeEEEEEeec-ccccHHHHHHHHHHHh
Q 016445 209 NYALGTLGG-DPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSF-LHFGQNVAFETLRELL 281 (389)
Q Consensus 209 Ny~lg~l~~-~~~~t~giiDlGGaStQIaf~~~~~~~~~~~~~~~l~~~~~~lYs~Sf-Lg~G~~~ar~~~~~~l 281 (389)
.+..-.. .....+.|+|+|||.+.++...-. +..+.+.+.+. ..+|-+..-+.+.+.+
T Consensus 203 --~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~-------------~~~~~v~~~~~~~~lGG~~~d~~l~~~l 262 (404)
T 3i33_A 203 --GLDKKGCAGGEKNVLIFDLGGGTFDVSILTIE-------------DGIFEVKSTAGDTHLGGEDFDNRMVSHL 262 (404)
T ss_dssp --TTTSSCSSSSCCEEEEEEECSSCEEEEEEEEE-------------TTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred --HhhcccccCCCceEEEEECCCCcEEEEEEEEe-------------CCeEEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 2221100 023567899999999999876421 11223333322 5566666555555444
No 17
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=93.05 E-value=0.84 Score=44.49 Aligned_cols=105 Identities=10% Similarity=0.050 Sum_probs=56.3
Q ss_pred HHHHHHHHHH-HhCCCCCCCCceEEEEEehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHHH
Q 016445 131 SLKDLLDFAK-RKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVAN 209 (389)
Q Consensus 131 ~l~~Ll~~a~-~~vp~~~~~~tpv~l~ATAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~WlavN 209 (389)
.++.+++.+- +.+..+ ....|+.+--.+. .+..+++++.+.+-+.+ +++ .+.++ .|+..+-
T Consensus 81 ~~e~i~~~~~~~~L~~~-~~~~~vvit~p~~---~~~~~r~~~~e~~fe~~---g~~----~~~~~---~e~~aaa---- 142 (375)
T 2fxu_A 81 DMEKIWHHTFYNELRVA-PEEHPTLLTEAPL---NPKANREKMTQIMFETF---NVP----AMYVA---IQAVLSL---- 142 (375)
T ss_dssp HHHHHHHHHHHTTSCCC-GGGSCEEEEECTT---CCHHHHHHHHHHHHHTT---CCS----EEEEE---EHHHHHH----
T ss_pred HHHHHHHHHHHHhcCCC-CcCCcEEEEeCCC---CcHHHHHHHHHHHHHhc---Ccc----eEEEc---cchheee----
Confidence 4555555553 333211 1235665544333 34466666666654432 443 35555 3555444
Q ss_pred HhcccCCCCCCCceeEEeeCCCeeEEEeecCCCCCccceeeEEecceeEE
Q 016445 210 YALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYN 259 (389)
Q Consensus 210 y~lg~l~~~~~~t~giiDlGGaStQIaf~~~~~~~~~~~~~~~l~~~~~~ 259 (389)
|..| ..+..|+|+|||.|.|+-..+...-......++++|.+.+
T Consensus 143 ~a~g------~~~~lVvDiG~gtt~v~~v~~G~~~~~~~~~~~~GG~~lt 186 (375)
T 2fxu_A 143 YASG------RTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 186 (375)
T ss_dssp HHTT------CSSEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHH
T ss_pred eecC------CCeEEEEEcCCCceEEeEeECCEEeccceEEeccCHHHHH
Confidence 3344 2467899999999999876554322222345667766443
No 18
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=93.02 E-value=1.2 Score=45.45 Aligned_cols=93 Identities=19% Similarity=0.290 Sum_probs=51.4
Q ss_pred cchH-HHHHHHHHHHHHHhCCCCCCCCceEEEEEehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhh
Q 016445 125 PTNA-GDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVY 203 (389)
Q Consensus 125 ~~~a-~~~l~~Ll~~a~~~vp~~~~~~tpv~l~ATAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y 203 (389)
|+.+ ...|+.|.+.|+..+.. ..+.+.+---|. ....+++++.++++. .|+. .+++|+.-.=+.+
T Consensus 86 ~~ei~a~~L~~l~~~ae~~l~~---~~~~~VitvPa~---~~~~qr~a~~~a~~~----AGl~----~~~li~Ep~AAAl 151 (509)
T 2v7y_A 86 PQEISAIILQYLKSYAEDYLGE---PVTRAVITVPAY---FNDAQRQATKDAGRI----AGLE----VERIINEPTAAAL 151 (509)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTS---CCCEEEEEECTT---CCHHHHHHHHHHHHH----TTCE----EEEEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEECCC---CCHHHHHHHHHHHHH----cCCC----eEEEecCHHHHHH
Confidence 4444 35666777777665432 234555543342 233556666665543 3664 4566643332322
Q ss_pred hHHHHHHhcccCCCCCCCceeEEeeCCCeeEEEeec
Q 016445 204 AWIVANYALGTLGGDPSETTGIIELGGASVQVTFVS 239 (389)
Q Consensus 204 ~WlavNy~lg~l~~~~~~t~giiDlGGaStQIaf~~ 239 (389)
+ |.+.. ....++.|+|+|||.+.++...
T Consensus 152 a-----y~~~~---~~~~~vlV~D~GgGT~Dvsv~~ 179 (509)
T 2v7y_A 152 A-----YGLDK---EEDQTILVYDLGGGTFDVSILE 179 (509)
T ss_dssp H-----TTGGG---SCSEEEEEEEECSSCEEEEEEE
T ss_pred H-----Hhhcc---CCCCEEEEEECCCCeEEEEEEE
Confidence 2 33321 1235678999999999998754
No 19
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=91.35 E-value=0.91 Score=44.76 Aligned_cols=111 Identities=9% Similarity=0.034 Sum_probs=54.4
Q ss_pred HHHHHHHHHH-HhCCCCCCCCceEEEEEehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHHH
Q 016445 131 SLKDLLDFAK-RKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVAN 209 (389)
Q Consensus 131 ~l~~Ll~~a~-~~vp~~~~~~tpv~l~ATAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~WlavN 209 (389)
.++.+++.+- +.+..+ ....++.+--.+. .+..+++++.+.+-+ ..+++ .+.++ .|+..+.+++
T Consensus 88 ~~e~i~~~~~~~~L~~~-~~~~~vvit~p~~---~~~~~r~~~~e~~fe---~~g~~----~~~l~---~ep~aa~~a~- 152 (418)
T 1k8k_A 88 LMERFMEQVIFKYLRAE-PEDHYFLLTEPPL---NTPENREYTAEIMFE---SFNVP----GLYIA---VQAVLALAAS- 152 (418)
T ss_dssp HHHHHHHHHHHTTTCCC-GGGCCEEEEECTT---CCHHHHHHHHHHHHH---TSCCS----EEEEE---EHHHHHHHHG-
T ss_pred HHHHHHHHHHHhccCCC-CCCCcEEEEeCCC---CCHHHHHHHHHHHHH---hcCCC----EEEEe---chHHHHhhhh-
Confidence 4555665553 233211 1234665544443 345666766665533 33554 35554 4555443321
Q ss_pred HhcccCCCCCCCceeEEeeCCCeeEEEeecCCCCCccceeeEEeccee
Q 016445 210 YALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVT 257 (389)
Q Consensus 210 y~lg~l~~~~~~t~giiDlGGaStQIaf~~~~~~~~~~~~~~~l~~~~ 257 (389)
|....+.... .+..|+|+|||.|.|+-..+...-......+.++|.+
T Consensus 153 ~~~~~~~~~~-~~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~ 199 (418)
T 1k8k_A 153 WTSRQVGERT-LTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 199 (418)
T ss_dssp GGSTTCCSCC-CCEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHH
T ss_pred hcccccCCCC-CeEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHH
Confidence 1111111111 3667999999999998775432212222445555543
No 20
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=90.52 E-value=2.4 Score=43.58 Aligned_cols=104 Identities=12% Similarity=0.063 Sum_probs=53.3
Q ss_pred HHHHHHHHHHH-HhCCCCCCCCceEEEEEehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHH
Q 016445 130 DSLKDLLDFAK-RKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVA 208 (389)
Q Consensus 130 ~~l~~Ll~~a~-~~vp~~~~~~tpv~l~ATAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~Wlav 208 (389)
+.++.+++.+- +.+........||.+.-... .+..+++++.+.+-+ ..+++ .+-++ +|++.+-
T Consensus 93 d~~E~iw~~~f~~~L~v~p~~~~pvlltep~~---n~~~~Re~~~eilFE---~f~vp----av~l~---~~~vlal--- 156 (498)
T 3qb0_A 93 DTAQEQWQWALQNELYLNSNSGIPALLTEPVW---NSTENRKKSLEVLLE---GMQFE----ACYLA---PTSTCVS--- 156 (498)
T ss_dssp HHHHHHHHHHHHHTSCCSCCTTCCEEEEECTT---CCHHHHHHHHHHHHT---TSCCS----EEEEE---EHHHHHH---
T ss_pred HHHHHHHHHHHHhhhCCCcccCCceEEEeCCC---CcHHHHHHHHHHHHh---hcCCC----eEeec---chHHHHH---
Confidence 45555665543 22221111113765443332 344566666665433 23443 23333 3444433
Q ss_pred HHhcccCCCCCCCceeEEeeCCCeeEEEeecCCCCCccceeeEEecce
Q 016445 209 NYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNV 256 (389)
Q Consensus 209 Ny~lg~l~~~~~~t~giiDlGGaStQIaf~~~~~~~~~~~~~~~l~~~ 256 (389)
|..|. .+..|||+|+|.|+|+-+.....-......++++|.
T Consensus 157 -ya~G~------~tglVVDiG~g~T~vvPI~~G~~l~~ai~rl~vgG~ 197 (498)
T 3qb0_A 157 -FAAGR------PNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGK 197 (498)
T ss_dssp -HHHTC------SSEEEEEECSSCEEEEEEETTEECGGGCEEESCSHH
T ss_pred -HHcCC------CeEEEEEcCCCcEEEEEEeCCEEccccceeccccHH
Confidence 44452 355799999999999987654333333445566654
No 21
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=88.79 E-value=3.2 Score=38.24 Aligned_cols=110 Identities=19% Similarity=0.193 Sum_probs=63.0
Q ss_pred EEEEEEeCCCceEEEEEEEeCCCCceeeccceeecCCCCcccCCCcchHHHHHHHHHHHHHHhCCCCCCCCceEEEEEeh
Q 016445 80 YGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMATA 159 (389)
Q Consensus 80 y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~~~k~~pGLss~~~~~~~a~~~l~~Ll~~a~~~vp~~~~~~tpv~l~ATA 159 (389)
|.+=||+|||+|.+.|.+ .++..+. ...... ...++.+.+.|+.+++.+... ......+.+|.
T Consensus 2 ~~lGID~GsT~tk~av~d--~~~~il~----~~~~~~-----g~~~e~a~~vl~~~~~~a~~~------~~~~~~~a~t~ 64 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILK--NGEDIVA----SETISS-----GTGTTGPSRVLEKLYGKTGLA------REDIKKVVVTG 64 (276)
T ss_dssp EEEEEEECSSCEEEEEEE--TTTEEEE----EEEESC-----CTTSSHHHHHHHHHHHHHCCC------GGGEEEEEEES
T ss_pred eEEEEEcCccEEEEEEEE--CCCeEEE----EEEecC-----CCCHHHHHHHHHHHHHHCCCc------chhccccccCc
Confidence 566799999999988874 3332221 111111 234666777777777666321 13445666677
Q ss_pred hhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHHHHhcccCCCCCCCceeEEeeCCCeeEEEeec
Q 016445 160 GLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTFVS 239 (389)
Q Consensus 160 GmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~WlavNy~lg~l~~~~~~t~giiDlGGaStQIaf~~ 239 (389)
+-|++- ... .+.|+ +-+| ...++.+.. .....++|+||+-+.+.+..
T Consensus 65 ~~~~a~------------------~~~-----~~~Vn-e~~a--ha~a~~~~~-------~~~~~vl~lgG~~~~~~~~~ 111 (276)
T 4ehu_A 65 YGRMNY------------------SDA-----DKQIS-ELSC--HARGVNFII-------PETRTIIDIGGQDAKVLKLD 111 (276)
T ss_dssp TTGGGC------------------CSC-----SEECC-HHHH--HHHHHHHHS-------TTCCEEEEECSSCEEEEEEC
T ss_pred hHHHHh------------------hCC-----Ccccc-hHHH--HHHHHHHhC-------CCCCeEEEEcCCCceEEEEE
Confidence 776631 111 34443 2233 244555543 13457999999999888764
No 22
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=82.71 E-value=8.7 Score=35.66 Aligned_cols=111 Identities=14% Similarity=0.125 Sum_probs=59.5
Q ss_pred EEEEEEeCCCceEEEEEEEeCCCCceeeccceeecCCCCcccCCCcchHHHHHHHHHHHHHH-hCCCCCCCCceEEEEEe
Q 016445 80 YGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKR-KVPPAFWADTEIRLMAT 158 (389)
Q Consensus 80 y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~~~k~~pGLss~~~~~~~a~~~l~~Ll~~a~~-~vp~~~~~~tpv~l~AT 158 (389)
|.+-||+||++|++.+++-+ ...+. ... .-.+| +|. +.+..+++.+.+ .++. ..-..+.+|
T Consensus 4 ~~lGiD~Gst~~k~~l~d~~--g~i~~--~~~-~~~~~------~~~---~~~~~~l~~l~~~~~~~----~~i~~i~~T 65 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILKDG--KEIVA--KSL-VAVGT------GTS---GPARSISEVLENAHMKK----EDMAFTLAT 65 (270)
T ss_dssp EEEEEEECSSEEEEEEEETT--TEEEE--EEE-EECCS------SCC---HHHHHHHHHHHHHTCCG----GGCSEEEEE
T ss_pred EEEEEEeccceEEEEEEeCC--CCEEE--EEE-ecCCC------CHH---HHHHHHHHHHHHcCCCh----hHEEEEEEe
Confidence 56889999999999999532 22222 111 11122 343 233344444333 3321 122456678
Q ss_pred hhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHHHHhcccCCCCCCCceeEEeeCCCeeEEEee
Q 016445 159 AGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTFV 238 (389)
Q Consensus 159 AGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~WlavNy~lg~l~~~~~~t~giiDlGGaStQIaf~ 238 (389)
.-.|.+=. . +. ..+ .+|-.=...++.++.. +...+|||||.-+.+.+.
T Consensus 66 G~g~~~~~---------------~--~~-----~~~---v~Ei~ah~~ga~~~~~-------~~~~vidiGGqd~k~i~~ 113 (270)
T 1hux_A 66 GYGRNSLE---------------G--IA-----DKQ---MSELSCHAMGASFIWP-------NVHTVIDIGGQDVKVIHV 113 (270)
T ss_dssp STTTTTTT---------------T--TC-----SEE---ECHHHHHHHHHHHHCT-------TCCEEEEEETTEEEEEEE
T ss_pred Cccccchh---------------h--cC-----CCC---cccHHHHHHHHHHhCC-------CCCEEEEECCCceEEEEE
Confidence 76665310 0 10 122 3344444556666643 233589999999999988
Q ss_pred cC
Q 016445 239 SD 240 (389)
Q Consensus 239 ~~ 240 (389)
.+
T Consensus 114 ~~ 115 (270)
T 1hux_A 114 EN 115 (270)
T ss_dssp ET
T ss_pred eC
Confidence 44
No 23
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=79.63 E-value=3 Score=42.68 Aligned_cols=59 Identities=24% Similarity=0.299 Sum_probs=34.7
Q ss_pred CceEEEEEEeCCCceEEEEEEEeCCCCceee---ccceeecCCCCcccCCCcchHHHHHHHHHHHH
Q 016445 77 SVKYGVLLDGGSTGTRIHVFSYDTETNHFDF---DLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFA 139 (389)
Q Consensus 77 ~~~y~vVIDaGSsgtRl~Vy~~~~~~~~l~~---~~~~~k~~pGLss~~~~~~~a~~~l~~Ll~~a 139 (389)
..+|.+.||+|++++|..||.-+ ++ .+.. +.....-.||-.. .||+..-+.+...++.+
T Consensus 2 ekkYvlgID~GTss~Ka~l~d~~-G~-~va~~~~~~~~~~p~~G~~E--qdp~~~w~~~~~~i~~~ 63 (526)
T 3ezw_A 2 EKKYIVALDQGTTSSRAVVMDHD-AN-IISVSQREFEQIYPKPGWVE--HDPMEIWATQSSTLVEV 63 (526)
T ss_dssp -CCEEEEEEECSSEEEEEEECTT-CC-EEEEEEEECCCBCSSTTCCE--ECHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEccccceeeeEEcCC-CC-EEEEEEEecCcccCCCCcEE--ECHHHHHHHHHHHHHHH
Confidence 35799999999999999998632 22 3321 0111122455432 37877666555554444
No 24
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=76.05 E-value=21 Score=36.65 Aligned_cols=91 Identities=16% Similarity=0.235 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceEEEEEehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHH
Q 016445 129 GDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVA 208 (389)
Q Consensus 129 ~~~l~~Ll~~a~~~vp~~~~~~tpv~l~ATAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~Wlav 208 (389)
...|+.|.+.|...+.. ..+.+.+---|..- ..+++++.++++ ..|+. .+++|+.-.-+.++
T Consensus 121 a~~L~~lk~~ae~~lg~---~v~~~VitVPa~f~---~~qr~a~~~A~~----~AGl~----~~~li~EP~AAAla---- 182 (554)
T 1yuw_A 121 SMVLTKMKEIAEAYLGK---TVTNAVVTVPAYFN---DSQRQATKDAGT----IAGLN----VLRIINEPTAAAIA---- 182 (554)
T ss_dssp HHHHHHHHHHHHHHHSS---CCCEEEEEECTTCC---HHHHHHHHHHHH----TTTCE----EEEEEEHHHHHHHH----
T ss_pred HHHHHHHHHHHHHHhCC---CCCeEEEEECCCCC---HHHHHHHHHHHH----HcCCC----eEEEeCcHHHHHHH----
Confidence 34566676667665432 23455554444332 245555555443 34774 46777644433332
Q ss_pred HHhcccCCCCCCCceeEEeeCCCeeEEEeec
Q 016445 209 NYALGTLGGDPSETTGIIELGGASVQVTFVS 239 (389)
Q Consensus 209 Ny~lg~l~~~~~~t~giiDlGGaStQIaf~~ 239 (389)
|.+..-. ....++.|+|+|||.+.++...
T Consensus 183 -y~~~~~~-~~~~~vlV~D~GgGT~Dvsv~~ 211 (554)
T 1yuw_A 183 -YGLDKKV-GAERNVLIFDLGGGTFDVSILT 211 (554)
T ss_dssp -TTCSTTC-SSCEEEEEEEECSSCEEEEEEE
T ss_pred -HHhhccC-CCCcEEEEEEcCCCeEEEEEEE
Confidence 4332110 1235678999999999998764
No 25
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=73.00 E-value=16 Score=34.39 Aligned_cols=91 Identities=21% Similarity=0.206 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCceEEEEEehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHH
Q 016445 128 AGDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIV 207 (389)
Q Consensus 128 a~~~l~~Ll~~a~~~vp~~~~~~tpv~l~ATAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~Wla 207 (389)
+.+.+..+++.++.. ......++.+---+. .+..+++++.+.++. .|+. .+++++ |..-+.++
T Consensus 76 ~~~i~~~~l~~~~~~---~~~~~~~~vitvP~~---~~~~~r~~~~~a~~~----aG~~----~~~li~---ep~Aaa~~ 138 (344)
T 1jce_A 76 ALVMLRYFINKAKGG---MNLFKPRVVIGVPIG---ITDVERRAILDAGLE----AGAS----KVFLIE---EPMAAAIG 138 (344)
T ss_dssp HHHHHHHHHHHHHTS---CCSCCCEEEEEECTT---CCHHHHHHHHHHHHH----TTCS----EEEEEE---HHHHHHHH
T ss_pred HHHHHHHHHHHHhhc---cccCCCeEEEEECCC---CCHHHHHHHHHHHHH----cCCC----eEeccC---CHHHHHHh
Confidence 344555555555442 112234555444443 334566666665443 3664 355554 33322222
Q ss_pred HHHhcccCCCCCCCceeEEeeCCCeeEEEeecC
Q 016445 208 ANYALGTLGGDPSETTGIIELGGASVQVTFVSD 240 (389)
Q Consensus 208 vNy~lg~l~~~~~~t~giiDlGGaStQIaf~~~ 240 (389)
|.+. .....++.|+|+|||.|.++....
T Consensus 139 --~~~~---~~~~~~~lVvDiGggttdvsv~~~ 166 (344)
T 1jce_A 139 --SNLN---VEEPSGNMVVDIGGGTTEVAVISL 166 (344)
T ss_dssp --TTCC---TTSSSCEEEEEECSSCEEEEEEET
T ss_pred --cCCC---CCCCceEEEEEeCCCeEEEEEEEc
Confidence 2221 112356789999999999998754
No 26
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=72.62 E-value=16 Score=34.91 Aligned_cols=91 Identities=21% Similarity=0.308 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceEEEEEehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHH
Q 016445 129 GDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVA 208 (389)
Q Consensus 129 ~~~l~~Ll~~a~~~vp~~~~~~tpv~l~ATAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~Wlav 208 (389)
...|+.+.+.|+..+.. ..+.+.+---+ ..+..+++.+.+.++. .|+. .++++ .|..=+- .
T Consensus 117 ~~~L~~l~~~a~~~~~~---~~~~~vitvP~---~~~~~~r~~~~~a~~~----aGl~----~~~li---~Ep~Aaa--~ 177 (383)
T 1dkg_D 117 AEVLKKMKKTAEDYLGE---PVTEAVITVPA---YFNDAQRQATKDAGRI----AGLE----VKRII---NEPTAAA--L 177 (383)
T ss_dssp HHHHHHHHHHHHHHHSS---CCCEEEECBCT---TCCHHHHHHHHHHHHH----TTCE----ESCCC---BHHHHHH--H
T ss_pred HHHHHHHHHHHHHHhCC---CCCeEEEEECC---CCCHHHHHHHHHHHHH----cCCc----eEEEe---ccHHHHH--H
Confidence 34566777777665421 12344432222 1233556666555443 3663 23333 3332222 2
Q ss_pred HHhcccCCCCCCCceeEEeeCCCeeEEEeecC
Q 016445 209 NYALGTLGGDPSETTGIIELGGASVQVTFVSD 240 (389)
Q Consensus 209 Ny~lg~l~~~~~~t~giiDlGGaStQIaf~~~ 240 (389)
.|.+.. .....++.++|+|||.|.++....
T Consensus 178 ~~~~~~--~~~~~~~lVvD~Gggttdvsv~~~ 207 (383)
T 1dkg_D 178 AYGLDK--GTGNRTIAVYDLGGGTFDISIIEI 207 (383)
T ss_dssp HHTCCC---CCEEEEEEEEECSSCEEEEEEEE
T ss_pred HHHhcc--CCCCcEEEEEEcCCCeEEEEEEEE
Confidence 233321 012246789999999999987643
No 27
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=71.71 E-value=66 Score=33.92 Aligned_cols=121 Identities=12% Similarity=0.149 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceEEEEEehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHH
Q 016445 129 GDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVA 208 (389)
Q Consensus 129 ~~~l~~Ll~~a~~~vp~~~~~~tpv~l~ATAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~Wlav 208 (389)
...|+.|.+.|...+.. ..+.+.+---|..- ..+++++.++++. .|+. -+++|+.-.=+.++|
T Consensus 120 a~~L~~lk~~ae~~lg~---~v~~~VITVPa~f~---~~qR~a~~~Aa~~----AGl~----~~~li~EP~AAAlay--- 182 (675)
T 3d2f_A 120 AMFIDKVKDTVKQDTKA---NITDVCIAVPPWYT---EEQRYNIADAARI----AGLN----PVRIVNDVTAAGVSY--- 182 (675)
T ss_dssp HHHHHHHHHHHHHHHCS---CCCEEEEEECTTCC---HHHHHHHHHHHHH----TTCE----EEEEEEHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCC---CcceEEEEECCCCC---HHHHHHHHHHHHH----cCCc----eEEEEcchHHHHHHH---
Confidence 34566676666665431 23455544444322 3556666666554 3774 467775433333333
Q ss_pred HHhccc--CCC--CCCCceeEEeeCCCeeEEEeecCCCCCccceeeEEecceeEEEEEee-cccccHHHHHHHHHHHh
Q 016445 209 NYALGT--LGG--DPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHS-FLHFGQNVAFETLRELL 281 (389)
Q Consensus 209 Ny~lg~--l~~--~~~~t~giiDlGGaStQIaf~~~~~~~~~~~~~~~l~~~~~~lYs~S-fLg~G~~~ar~~~~~~l 281 (389)
.+.. +.. ....++.|+|+|||.+.++...-. +..+.|.+.+ -..+|-+..-+++..++
T Consensus 183 --gl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~-------------~g~~~V~a~~gd~~lGG~d~D~~l~~~l 245 (675)
T 3d2f_A 183 --GIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFK-------------KGQLKVLGTACDKHFGGRDFDLAITEHF 245 (675)
T ss_dssp --HHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEE-------------TTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred --hhhccccccccCCCcEEEEEEcCCCcEEEEEEEec-------------CCeEEEEEEcCCCCccHHHHHHHHHHHH
Confidence 2211 110 123467899999999999876321 1123344443 24566665555555544
No 28
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=71.28 E-value=43 Score=31.74 Aligned_cols=49 Identities=10% Similarity=0.205 Sum_probs=31.1
Q ss_pred CCceeEEeeCCCeeEEEeecCCCCCccceeeEEecceeEEEEEeecccccHHHHHHHHHHHhhc
Q 016445 220 SETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSS 283 (389)
Q Consensus 220 ~~t~giiDlGGaStQIaf~~~~~~~~~~~~~~~l~~~~~~lYs~SfLg~G~~~ar~~~~~~l~~ 283 (389)
...+.+||||||.|.++.......-.. ++.| +-+|.+...+.+.+.+..
T Consensus 171 ~~~v~vvDiGggTtd~~v~~~g~~~~~--------------~~~~-~~~G~~~~~~~i~~~l~~ 219 (329)
T 4apw_A 171 NKNVAVIDFGGLNMGFSLYRNCVVNPS--------------ERFI-EEHGVKDLIIRVGDALTD 219 (329)
T ss_dssp TCEEEEEEECSSCEEEEEEETTEECGG--------------GCEE-ESCCHHHHHHHHHTSSSS
T ss_pred cCCEEEEEeCCCcEEEEEEECCEEeec--------------cccc-hhhHHHHHHHHHHHHHHh
Confidence 356789999999999998754211000 1122 237888887777665543
No 29
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=67.71 E-value=20 Score=37.26 Aligned_cols=91 Identities=19% Similarity=0.294 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceEEEEEehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHHHH
Q 016445 129 GDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVA 208 (389)
Q Consensus 129 ~~~l~~Ll~~a~~~vp~~~~~~tpv~l~ATAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~Wlav 208 (389)
...|+.|.+.|+..+.. ..+.+.+---|.. ...+++++.++++ ..|+. -+++|+.-.=+.++
T Consensus 117 a~~L~~l~~~ae~~l~~---~v~~~VitVPa~f---~d~qr~a~~~A~~----~AGl~----v~~li~EP~AAAla---- 178 (605)
T 2kho_A 117 AEVLKKMKKTAEDYLGE---PVTEAVITVPAYF---NDAQRQATKDAGR----IAGLE----VKRIINEPTAAALA---- 178 (605)
T ss_dssp HHHHHHHHHHHHHHHCS---CCCEEEEEECTTC---CHHHHHHHHHHHH----TTTCE----EEEEEEHHHHHHHH----
T ss_pred HHHHHHHHHHHHHHhCC---CCcEEEEEECCCC---CHHHHHHHHHHHH----HcCCc----eEEEecCHHHHHHH----
Confidence 34567777777665421 2345555444432 2345555555544 34774 35666543333232
Q ss_pred HHhcccCCCCCCCceeEEeeCCCeeEEEeecC
Q 016445 209 NYALGTLGGDPSETTGIIELGGASVQVTFVSD 240 (389)
Q Consensus 209 Ny~lg~l~~~~~~t~giiDlGGaStQIaf~~~ 240 (389)
|.+..- .....+.|+|+|||.+.++....
T Consensus 179 -y~l~~~--~~~~~vlV~DlGGGT~Dvsi~~~ 207 (605)
T 2kho_A 179 -YGLDKG--TGNRTIAVYDLGGGTFDISIIEI 207 (605)
T ss_dssp -TTTTSS--SSEEEEEEEEECSSCEEEEEEEE
T ss_pred -hhhccc--CCCCEEEEEECCCCeEEEEEEEE
Confidence 333210 02345789999999999987653
No 30
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=66.58 E-value=8.4 Score=39.17 Aligned_cols=60 Identities=20% Similarity=0.140 Sum_probs=34.5
Q ss_pred CceEEEEEEeCCCceEEEEEEEeCCCCceeeccc---eeecCCCCcccCCCcchHHHHHHHHHHHHH
Q 016445 77 SVKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLG---SMRLNPGLSSYAVNPTNAGDSLKDLLDFAK 140 (389)
Q Consensus 77 ~~~y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~---~~k~~pGLss~~~~~~~a~~~l~~Ll~~a~ 140 (389)
..+|.+.||+|+|++|..+|. ..++ .+..... ...-.||-. ..+|+...+.+..+++.+.
T Consensus 5 ~~~~~lgIDiGtts~k~~l~d-~~G~-il~~~~~~~~~~~p~~g~~--e~dp~~~~~~i~~~i~~~~ 67 (508)
T 3ifr_A 5 QGRQVIGLDIGTTSTIAILVR-LPDT-VVAVASRPTTLSSPHPGWA--EEDPAQWWDNARAVLAELK 67 (508)
T ss_dssp --CEEEEEEECSSEEEEEEEE-TTTE-EEEEEEEECCCBCSSTTCC--EECHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEEEecCcceEEEEEC-CCCC-EEEEEEEecceecCCCCce--EECHHHHHHHHHHHHHHHH
Confidence 356889999999999999998 3322 2221000 111134432 2367777666666665543
No 31
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=64.46 E-value=18 Score=36.65 Aligned_cols=61 Identities=16% Similarity=0.199 Sum_probs=37.6
Q ss_pred ceEEEEEEeCCCceEEEEEEEeCCCCceeeccc---eeecCCCCcccCCCcchHHHHHHHHHHHHHHh
Q 016445 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLG---SMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRK 142 (389)
Q Consensus 78 ~~y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~---~~k~~pGLss~~~~~~~a~~~l~~Ll~~a~~~ 142 (389)
++|.+.||+|+|++|..+|.-+ ++ .+..... ...-.||-. ..+|+...+.+..+++.+.+.
T Consensus 3 m~~~lgIDiGtts~K~~l~d~~-G~-il~~~~~~~~~~~p~~g~~--e~dp~~~~~~~~~~i~~~~~~ 66 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDIN-GK-AVASVSKGYPLIQTKVGQA--EEDPKLIFDAVQEIIFDLTQK 66 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEETT-SC-EEEEEEEECCCBCSSTTCC--EECHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEEecCCceEEEEEcCC-CC-EEEEEEeecceecCCCCcE--EECHHHHHHHHHHHHHHHHHh
Confidence 4688999999999999999753 22 3321011 112234533 237777777777777666544
No 32
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=63.93 E-value=6.7 Score=40.30 Aligned_cols=59 Identities=14% Similarity=0.138 Sum_probs=35.0
Q ss_pred ceEEEEEEeCCCceEEEEEEEeCCCCceeec---cceeecCCCCcccCCCcchHHHHHHHHHHHHH
Q 016445 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDFD---LGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAK 140 (389)
Q Consensus 78 ~~y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~---~~~~k~~pGLss~~~~~~~a~~~l~~Ll~~a~ 140 (389)
++|.+.||+|+|++|..||.- .++ .+... .....-.||-. ..+|+...+.+..+++.+.
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~-~G~-il~~~~~~~~~~~p~~g~~--eqdp~~~~~~~~~~i~~~~ 65 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDL-QGR-MVGQASREITMFKPKADFV--EQSSENIWQAVCNAVRDAV 65 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEET-TSC-EEEEEEEECCCEEEETTEE--EECHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEECcccEEEEEECC-CCC-EEEEEEEecccccCCCCcc--ccCHHHHHHHHHHHHHHHH
Confidence 468899999999999999983 332 33210 01112235533 2367776666666555543
No 33
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=62.78 E-value=16 Score=37.01 Aligned_cols=61 Identities=25% Similarity=0.257 Sum_probs=36.0
Q ss_pred ceEEEEEEeCCCceEEEEEEEeCCCCceeeccce---eecCCCCcccCCCcchHHHHHHHHHHHHHHh
Q 016445 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGS---MRLNPGLSSYAVNPTNAGDSLKDLLDFAKRK 142 (389)
Q Consensus 78 ~~y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~~---~k~~pGLss~~~~~~~a~~~l~~Ll~~a~~~ 142 (389)
++|.+.||+|+|++|+.+|..+ ++ .+...... ..-.||-. ..+|+...+.+..+++.+.+.
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~~-G~-il~~~~~~~~~~~p~~g~~--e~dp~~~~~~~~~~i~~~~~~ 65 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDHD-AN-IISVSQREFEQIYPKPGWV--EHDPMEIWATQSSTLVEVLAK 65 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECTT-CC-EEEEEEEECCCBCSSTTCC--EECHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEcCCcceEEEEECCC-CC-EEEEEEEecccccCCCCcE--EECHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999743 22 33210011 11134432 346777777766666655443
No 34
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=58.06 E-value=7.4 Score=39.50 Aligned_cols=58 Identities=16% Similarity=0.197 Sum_probs=32.4
Q ss_pred ceEEEEEEeCCCceEEEEEEEeCCCCceeeccc--eeecCCCCcccCCCcchHHHHHHHHHHHH
Q 016445 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLG--SMRLNPGLSSYAVNPTNAGDSLKDLLDFA 139 (389)
Q Consensus 78 ~~y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~--~~k~~pGLss~~~~~~~a~~~l~~Ll~~a 139 (389)
++|.+.||+|+|++|..+|. ..++ .+..... ...-.||-. ..+|+...+.+..+++.+
T Consensus 5 m~~~lgIDiGTts~Ka~l~d-~~G~-i~~~~~~~~~~~~~~g~~--eqdp~~~~~~~~~~i~~~ 64 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWD-LDGR-MLDRQVRPSIPLEIDGIR--RLDAPDTGRWLLDVLSRY 64 (482)
T ss_dssp ---CEEEEECSSEEEEEEEC-TTSC-EEEEEEEECCCEESSSCE--ECCHHHHHHHHHHHHHHT
T ss_pred hceEEEEEcCCCCeEEEEEE-CCCc-EEEEEEecCCcccCCCce--eECHHHHHHHHHHHHHHH
Confidence 46889999999999999997 3333 3321001 111234422 346777666666665554
No 35
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=57.82 E-value=21 Score=36.06 Aligned_cols=58 Identities=17% Similarity=0.246 Sum_probs=34.2
Q ss_pred ceEEEEEEeCCCceEEEEEEEeCCCCceeecccee---ecCCCCcccCCCcchHHHHHHHHHHHH
Q 016445 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSM---RLNPGLSSYAVNPTNAGDSLKDLLDFA 139 (389)
Q Consensus 78 ~~y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~~~---k~~pGLss~~~~~~~a~~~l~~Ll~~a 139 (389)
++|.+.||+|+|++|+.+|..+ ++ .+....... .-.||-. ..+|+...+.+..+++.+
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~-G~-il~~~~~~~~~~~p~~g~~--e~dp~~~~~~~~~~i~~~ 64 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRN-GK-KIGSSQKEFPQYFPKSGWV--EHNANEIWNSVQSVIAGA 64 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETT-SC-EEEEEEEECCCBCSSTTCC--EECHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCCCceEEEEECCC-CC-EEEEEEEecCccCCCCCcE--EECHHHHHHHHHHHHHHH
Confidence 4688999999999999999853 22 222100111 1134432 236777766666665554
No 36
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=57.21 E-value=18 Score=36.64 Aligned_cols=59 Identities=12% Similarity=-0.024 Sum_probs=35.9
Q ss_pred ceEEEEEEeCCCceEEEEEEEeCCCCceeecc---ceeecCCCCcccCCCcchHHHHHHHHHHHHH
Q 016445 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDFDL---GSMRLNPGLSSYAVNPTNAGDSLKDLLDFAK 140 (389)
Q Consensus 78 ~~y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~---~~~k~~pGLss~~~~~~~a~~~l~~Ll~~a~ 140 (389)
++|.+.||+|+|++|+.++..+ ++ .+.... ....-.||-. ..+|+...+.+..+++.+.
T Consensus 4 m~~~lgIDiGtts~k~~l~d~~-G~-il~~~~~~~~~~~p~~g~~--e~dp~~~~~~~~~~i~~~~ 65 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADRD-GG-LHFQRSIALETYGDGNGPV--EQDAGDWYDAVQRIASSWW 65 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECTT-SC-EEEEEEEECCCBSTTSSCC--EECHHHHHHHHHHHHHHHH
T ss_pred ccEEEEEEeCCCceEEEEECCC-CC-EEEEEEeecceecCCCCCE--EECHHHHHHHHHHHHHHHH
Confidence 4688999999999999999754 22 222101 1112234432 2367777776766666554
No 37
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=54.80 E-value=17 Score=37.42 Aligned_cols=25 Identities=20% Similarity=0.319 Sum_probs=20.2
Q ss_pred ceEEEEEEeCCCceEEEEEEEeCCC
Q 016445 78 VKYGVLLDGGSTGTRIHVFSYDTET 102 (389)
Q Consensus 78 ~~y~vVIDaGSsgtRl~Vy~~~~~~ 102 (389)
.+|.+.||+|+|++|+.++..+.++
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~~~G~ 28 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDLSNGQ 28 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEETTTCC
T ss_pred CCEEEEEecCCcceEEEEEECCCCe
Confidence 4688999999999999999863433
No 38
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=53.73 E-value=24 Score=35.56 Aligned_cols=59 Identities=15% Similarity=0.155 Sum_probs=34.9
Q ss_pred eEEEEEEeCCCceEEEEEEEeCCCCceeecccee---ecCCCCcccCCCcchHHHHHHHHHHHHHH
Q 016445 79 KYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSM---RLNPGLSSYAVNPTNAGDSLKDLLDFAKR 141 (389)
Q Consensus 79 ~y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~~~---k~~pGLss~~~~~~~a~~~l~~Ll~~a~~ 141 (389)
+|.+.||+|+|++|+.++..+. + .+....... .-.||-. ..+|+.+.+.+..+++.+.+
T Consensus 6 ~~~lgIDiGtts~k~~l~d~~G-~-il~~~~~~~~~~~p~~g~~--e~d~~~~~~~~~~~i~~~~~ 67 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQKG-E-IAGVAQREFKQYFPQSGWV--EHDANEIWTSVLAVMTEVIN 67 (501)
T ss_dssp CEEEEEEECSSEEEEEEECTTS-C-EEEEEEEECCCBCSSTTCC--EECHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEeCccceEEEEEcCCC-C-EEEEEEeecccccCCCCcE--EECHHHHHHHHHHHHHHHHH
Confidence 5889999999999999997532 2 222101111 1134422 33677776666666665544
No 39
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=51.59 E-value=19 Score=37.98 Aligned_cols=27 Identities=19% Similarity=0.324 Sum_probs=23.2
Q ss_pred CCceEEEEEEeCCCceEEEEEEEeCCC
Q 016445 76 SSVKYGVLLDGGSTGTRIHVFSYDTET 102 (389)
Q Consensus 76 ~~~~y~vVIDaGSsgtRl~Vy~~~~~~ 102 (389)
....|++.||+|+|+.+.+++....++
T Consensus 203 ~~~~~GlAvDiGTTtv~~~LvdL~tG~ 229 (631)
T 3zyy_X 203 SQRVFGLAIDIGTTTVVVQLVDLVSGK 229 (631)
T ss_dssp CCCCEEEEEEECSSEEEEEEEETTTCC
T ss_pred CCCceEEEEEecccceeEEEEECCCCC
Confidence 345799999999999999999887754
No 40
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=49.29 E-value=14 Score=35.35 Aligned_cols=19 Identities=16% Similarity=0.303 Sum_probs=16.6
Q ss_pred CceeEEeeCCCeeEEEeec
Q 016445 221 ETTGIIELGGASVQVTFVS 239 (389)
Q Consensus 221 ~t~giiDlGGaStQIaf~~ 239 (389)
.++.++|||||.|.++...
T Consensus 190 ~~vlVvDIGgGTtDv~vi~ 208 (346)
T 2fsj_A 190 GYGVVIDVGSRTTDVLTIN 208 (346)
T ss_dssp SEEEEEEECSSCEEEEEEE
T ss_pred CcEEEEECCCCcEEEEEEE
Confidence 4568999999999999875
No 41
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=48.88 E-value=28 Score=35.02 Aligned_cols=58 Identities=14% Similarity=0.220 Sum_probs=33.4
Q ss_pred ceEEEEEEeCCCceEEEEEEEeCCCCceeeccceee---cCCCCcccCCCcchHHHHHHHHHHHH
Q 016445 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMR---LNPGLSSYAVNPTNAGDSLKDLLDFA 139 (389)
Q Consensus 78 ~~y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~~~k---~~pGLss~~~~~~~a~~~l~~Ll~~a 139 (389)
++|.+.||+|+|++|+.|+..+ ++ .+........ -.||-. ..+|+.+.+.+..+++.+
T Consensus 3 m~~~lgIDiGtT~~k~~l~d~~-g~-i~~~~~~~~~~~~~~~g~~--e~d~~~~~~~i~~~i~~~ 63 (503)
T 2w40_A 3 MNVILSIDQSTQSTKVFFYDEE-LN-IVHSNNLNHEQKCLKPGWY--EHDPIEIMTNLYNLMNEG 63 (503)
T ss_dssp CEEEEEEEECSSEEEEEEEETT-CC-EEEEEEEECCCBCCSTTCC--EECHHHHHHHHHHHHHHH
T ss_pred ccEEEEEEeCCcceEEEEECCC-CC-EEEEEEEeeeeecCCCCcE--EECHHHHHHHHHHHHHHH
Confidence 4688999999999999999743 22 3321011111 123322 236777666666555544
No 42
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=48.87 E-value=24 Score=35.92 Aligned_cols=56 Identities=14% Similarity=0.226 Sum_probs=36.1
Q ss_pred ceEEEEEEeCCCceEEEEEEEeCCCCceeeccceeecCCCCcccCCCcchHHHHHHHHHHHH
Q 016445 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFA 139 (389)
Q Consensus 78 ~~y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~~~k~~pGLss~~~~~~~a~~~l~~Ll~~a 139 (389)
.+|.+.||+|+|++|..||....++ .+. ..... .||-. ..+|+...+.+..+++.+
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~~G~-i~~--~~~~~-~~g~~--e~d~~~~~~~i~~~l~~~ 59 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAETGE-LVR--FGQAK-HPNGT--SVDPSYWWSAFQEAAEQA 59 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETTTCC-EEE--EEEEE-CCSSS--EECTHHHHHHHHHHHHHT
T ss_pred CcEEEEEEeccccEEEEEEECCCCe-EEE--EEEEe-CCCCc--eECHHHHHHHHHHHHHhc
Confidence 4688999999999999999754433 332 11122 24422 237777777777777644
No 43
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=47.84 E-value=65 Score=34.08 Aligned_cols=109 Identities=17% Similarity=0.293 Sum_probs=60.2
Q ss_pred hHHHHHHHHHHHHHH--hC--CCCCCCCceEEEEEehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchh
Q 016445 127 NAGDSLKDLLDFAKR--KV--PPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGV 202 (389)
Q Consensus 127 ~a~~~l~~Ll~~a~~--~v--p~~~~~~tpv~l~ATAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~ 202 (389)
...+.++.+++.+-. .+ ..+.....||.+.-... .+..+++++.+.+-+.+ +++ .+-++ ++++
T Consensus 194 ~~WD~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPpl---np~~~REkm~EIlFE~f---gvp----avyl~---~qav 260 (655)
T 4am6_A 194 ELISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDI---FKKSHVETFIRVLLTEL---QFQ----AVAII---QESL 260 (655)
T ss_dssp HHHHHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTT---CCHHHHHHHHHHHHHTS---CCS----EEEEE---EHHH
T ss_pred ccHHHHHHHHHHHhccccccccccccCCCcEEEEeCCC---CCHHHHHHHHHHHHhhc---CCC----eeeec---cHHH
Confidence 345667777776643 22 21111235666544432 35567777777665533 443 24443 3555
Q ss_pred hhHHHHHHhcccCCCCCCCceeEEeeCCCeeEEEeecCCCCCccceeeEEeccee
Q 016445 203 YAWIVANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVT 257 (389)
Q Consensus 203 y~WlavNy~lg~l~~~~~~t~giiDlGGaStQIaf~~~~~~~~~~~~~~~l~~~~ 257 (389)
.+- |..|. ..+..|||+|+|.|+|+-+.....-......++++|..
T Consensus 261 lAl----yasGl-----~ttGLVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~d 306 (655)
T 4am6_A 261 ATC----YGAGI-----STSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDD 306 (655)
T ss_dssp HHH----HHSCC-----SSCEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHH
T ss_pred HHH----HhCCC-----CCceEEEcCCCceEEEEEEeCCEEEhhheeeecchHHH
Confidence 544 44441 13556999999999999876553333334456666653
No 44
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=47.79 E-value=31 Score=35.09 Aligned_cols=59 Identities=19% Similarity=0.193 Sum_probs=35.0
Q ss_pred eEEEEEEeCCCceEEEEEEEeCCCCceeecccee---ecCCCCcccCCCcchHHHHHHHHHHHHHH
Q 016445 79 KYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSM---RLNPGLSSYAVNPTNAGDSLKDLLDFAKR 141 (389)
Q Consensus 79 ~y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~~~---k~~pGLss~~~~~~~a~~~l~~Ll~~a~~ 141 (389)
+|.+.||+|+|++|+.++..+. + .+....... .-.||-. ..+|+..-+.+..+++.+.+
T Consensus 26 ~~~lgIDiGtts~k~~l~d~~G-~-il~~~~~~~~~~~p~~g~~--e~dp~~~~~~i~~~i~~~~~ 87 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFDGNQ-K-IAGVGQKEFKQHFPKSGWV--EHDPEEIWQTVVSTVKEAIE 87 (520)
T ss_dssp CEEEEEEECSSEEEEEEECTTS-C-EEEEEEEECCCBCSSTTCC--EECHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCcceEEEEECCCC-C-EEEEEEEecccccCCCCcE--EECHHHHHHHHHHHHHHHHH
Confidence 5889999999999999997532 2 232100111 1134422 23677777666666665544
No 45
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=47.76 E-value=38 Score=34.03 Aligned_cols=59 Identities=17% Similarity=0.209 Sum_probs=33.8
Q ss_pred eEEEEEEeCCCceEEEEEEEeCCCCceeeccce---eecCCCCcccCCCcchHHHHHHHHHHHHHH
Q 016445 79 KYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGS---MRLNPGLSSYAVNPTNAGDSLKDLLDFAKR 141 (389)
Q Consensus 79 ~y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~~---~k~~pGLss~~~~~~~a~~~l~~Ll~~a~~ 141 (389)
+|.+.||+|+|++|+.++..+ ++ .+...... ..-.+|-. ..+|+.+.+.+..+++.+.+
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~~-g~-i~~~~~~~~~~~~p~~g~~--e~d~~~~~~~i~~~i~~~~~ 63 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTLE-GR-PVAVAKREFRQLYPKPGWV--EHDPLEIWETTLWAAREVLR 63 (495)
T ss_dssp -CEEEEEECSSEEEEEEECTT-SC-EEEEEEEECCEECSSTTCC--EECHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEeeCCcceEEEEECCC-CC-EEEEEEEeeceecCCCCcE--eeCHHHHHHHHHHHHHHHHH
Confidence 467899999999999999743 22 33210011 11123322 23677776666666665543
No 46
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=44.78 E-value=53 Score=32.59 Aligned_cols=39 Identities=10% Similarity=0.132 Sum_probs=27.3
Q ss_pred CceeEEeeCCCeeEEEeecCCCCCccceeeEEecceeEE
Q 016445 221 ETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYN 259 (389)
Q Consensus 221 ~t~giiDlGGaStQIaf~~~~~~~~~~~~~~~l~~~~~~ 259 (389)
.+..|||+|+|.|+|+-..+...-.....+++++|...+
T Consensus 179 ~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt 217 (427)
T 3dwl_A 179 LTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVT 217 (427)
T ss_dssp CCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHH
T ss_pred ceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHH
Confidence 456699999999999987665433344556777776443
No 47
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=44.04 E-value=66 Score=32.74 Aligned_cols=104 Identities=18% Similarity=0.199 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHH-h--CCCCCCCCceEEEEEehhhcccchhcHHHHHHHHHHHhhccCccccCCceEEcCCccchhhhHH
Q 016445 130 DSLKDLLDFAKR-K--VPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWI 206 (389)
Q Consensus 130 ~~l~~Ll~~a~~-~--vp~~~~~~tpv~l~ATAGmR~l~~~~~~~il~~vr~~l~~s~f~f~~~~i~VIsG~eEg~y~Wl 206 (389)
+.++.+.+.+-. . |+.+.....||.+.--.- .+..+++++.+.+=+.+ +|+ .+-++ .+++.+-
T Consensus 175 dd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~---~~~~~re~~~eilFE~f---~~p----a~~~~---~~~vla~- 240 (593)
T 4fo0_A 175 ADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDI---YNKQHVKELVNMILMKM---GFS----GIVVH---QESVCAT- 240 (593)
T ss_dssp HHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSS---CCHHHHHHHHHHHHHTT---CCS----EEEEE---EHHHHHH-
T ss_pred HHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCC---CCHHHHHHHHHHHHHhc---CCC----eEEee---chHHHHH-
Confidence 456666666543 2 333344445676554432 45567777766655433 443 23333 3554444
Q ss_pred HHHHhcccCCCCCCCceeEEeeCCCeeEEEeecCCCCCccceeeEEecce
Q 016445 207 VANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNV 256 (389)
Q Consensus 207 avNy~lg~l~~~~~~t~giiDlGGaStQIaf~~~~~~~~~~~~~~~l~~~ 256 (389)
|..| ..|..|||+|-+.|.|+=+.+.-.-.....++.++|.
T Consensus 241 ---ya~G------~~tglVVDiG~~~T~v~PV~dG~~l~~~~~rl~~GG~ 281 (593)
T 4fo0_A 241 ---YGSG------LSSTCIVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGS 281 (593)
T ss_dssp ---HHHT------CSEEEEEEECSSCEEEEEEESSCBCGGGCEEESCCHH
T ss_pred ---HHCC------CCceEEEEeCCCceeeeeeECCEEehhheEEecccHH
Confidence 4445 2466799999999999988776544444455555554
No 48
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=42.70 E-value=41 Score=33.57 Aligned_cols=63 Identities=19% Similarity=0.214 Sum_probs=35.4
Q ss_pred ceEEEEEEeCCCceEEEEEEEeCCCCceeeccceeecCCCCcc----cCCCcchHHHHHHHHHHHHHH
Q 016445 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSS----YAVNPTNAGDSLKDLLDFAKR 141 (389)
Q Consensus 78 ~~y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~~~k~~pGLss----~~~~~~~a~~~l~~Ll~~a~~ 141 (389)
++|.+.||+|+|++|..++..+...-... .....+..++... ...+++.+.+.+..+++.+..
T Consensus 3 ~~~~lgiDiGtts~k~~l~d~~g~~~~~~-~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~ 69 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLARYERECRSLT-LREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCA 69 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEEEEGGGTEEE-EEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEecCCCceEEEEEecCccceEE-EEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHh
Confidence 45778999999999999998653111111 0011111122111 123677777777777766543
No 49
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=41.04 E-value=42 Score=33.68 Aligned_cols=58 Identities=22% Similarity=0.272 Sum_probs=33.2
Q ss_pred eEEEEEEeCCCceEEEEEEEeCCCCceeecccee---ecCCCCcccCCCcchHHHHHHHHHHHHH
Q 016445 79 KYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSM---RLNPGLSSYAVNPTNAGDSLKDLLDFAK 140 (389)
Q Consensus 79 ~y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~~~---k~~pGLss~~~~~~~a~~~l~~Ll~~a~ 140 (389)
+|.+.||+|+|++|..++..+ ++ .+....... .-.||-. ..+|+.+.+.+..+++.+.
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~~-g~-~~~~~~~~~~~~~p~~g~~--e~d~~~~~~~~~~~i~~~~ 63 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDRE-SN-IHGIGQYEFPQHYPRPGWV--EHNPEEIWDAQLRAIKDAI 63 (497)
T ss_dssp CEEEEEEECSSEEEEEEECTT-CC-EEEEEEEECCCBCCSTTCC--EECHHHHHHHHHHHHHHHH
T ss_pred cEEEEEecCCchhEEEEECCC-CC-EEEEEEeccceecCCCCcE--EECHHHHHHHHHHHHHHHH
Confidence 477899999999999999743 22 332100011 1123322 2367776666666655543
No 50
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=40.79 E-value=17 Score=37.23 Aligned_cols=22 Identities=5% Similarity=0.022 Sum_probs=18.8
Q ss_pred CCceEEEEEEeCCCceEEEEEE
Q 016445 76 SSVKYGVLLDGGSTGTRIHVFS 97 (389)
Q Consensus 76 ~~~~y~vVIDaGSsgtRl~Vy~ 97 (389)
.++.|.+.||+|++++|..||.
T Consensus 7 ~~~~~~lgID~GTts~Ka~l~d 28 (538)
T 4bc3_A 7 APRRCCLGWDFSTQQVKVVAVD 28 (538)
T ss_dssp --CCEEEEEEECSSEEEEEEEE
T ss_pred CCCCEEEEEEEcCcCEEEEEEC
Confidence 3457999999999999999998
No 51
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=40.41 E-value=81 Score=29.06 Aligned_cols=77 Identities=19% Similarity=0.198 Sum_probs=41.5
Q ss_pred eEEEEEEeCCCceEEEEEEEeCCCCceeeccceeecCCCCcccCCCcchHHHHHHHHHHHHHHhCCCCCCCCc-eEEEEE
Q 016445 79 KYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFWADT-EIRLMA 157 (389)
Q Consensus 79 ~y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~~~k~~pGLss~~~~~~~a~~~l~~Ll~~a~~~vp~~~~~~t-pv~l~A 157 (389)
+|.+.||+|.|.+|+.+++... + .+. ..+..+ .....+++.+.+.+..+++.+.+..+....... --..++
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~~G-~-il~----~~~~~~--~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~i~~~~igig 82 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHASDG-T-PLA----MAEGGA--SALSQGIAKSWQAVLSTLEAAFQQAGLPAAPASACAIGLG 82 (305)
T ss_dssp CEEEEEEECSSCEEEEEEETTC-C-EEE----EEEESC--CCGGGCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEEEE
T ss_pred CEEEEEEcCccceEEEEEcCCC-C-EEE----EEeCCC--CCcccCHHHHHHHHHHHHHHHHHhcCCChhhhccceEEEE
Confidence 3889999999999999997432 2 232 112211 111234566666666666655443221111110 125567
Q ss_pred ehhhcc
Q 016445 158 TAGLRL 163 (389)
Q Consensus 158 TAGmR~ 163 (389)
.+|.-.
T Consensus 83 ~pG~v~ 88 (305)
T 1zc6_A 83 LSGVHN 88 (305)
T ss_dssp ESCCCT
T ss_pred ecCCCc
Confidence 888744
No 52
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=39.36 E-value=1.1e+02 Score=28.42 Aligned_cols=91 Identities=12% Similarity=0.077 Sum_probs=46.1
Q ss_pred EEEEEEeCCCceEEEEEEEeCCCCceeeccceeecCCCCcccC-CCcchHHHHHHHHHHHHHHhCCCCCCCCceEEEEEe
Q 016445 80 YGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSSYA-VNPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMAT 158 (389)
Q Consensus 80 y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~~~k~~pGLss~~-~~~~~a~~~l~~Ll~~a~~~vp~~~~~~tpv~l~AT 158 (389)
|.+.||+|.|.+|+.++.... + .+. ..+..+ .... .+++.+.+.|..+++.+.+..........--..+|.
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g-~-i~~----~~~~~~--~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~~ 78 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDG-K-ILA----EADGLS--TNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSL 78 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTS-C-EEE----EEEECC--CCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEE
T ss_pred EEEEEEcCccceEEEEEeCCC-C-EEE----EEeCCC--CCcccCCHHHHHHHHHHHHHHHHHhcCCCcccceeEEEEec
Confidence 889999999999999997532 2 222 112211 1111 245555566666655543321111110122355778
Q ss_pred hhhcccchhcHHHHHHHHHHHh
Q 016445 159 AGLRLVDVVVQDKILDSCRRVL 180 (389)
Q Consensus 159 AGmR~l~~~~~~~il~~vr~~l 180 (389)
+|.-. .++...+-+.+++.+
T Consensus 79 pG~vd--~~~~~~l~~~l~~~~ 98 (347)
T 2ch5_A 79 SGGDQ--EDAGRILIEELRDRF 98 (347)
T ss_dssp TTTTC--HHHHHHHHHHHHHHC
T ss_pred cCCCc--hHHHHHHHHHHHHhc
Confidence 88744 222333444555544
No 53
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=37.24 E-value=63 Score=32.49 Aligned_cols=59 Identities=19% Similarity=0.301 Sum_probs=34.0
Q ss_pred eEEEEEEeCCCceEEEEEEEeCCCCceeeccceee---cCCCCcccCCCcchHHHHHHHHHHHHHH
Q 016445 79 KYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMR---LNPGLSSYAVNPTNAGDSLKDLLDFAKR 141 (389)
Q Consensus 79 ~y~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~~~~k---~~pGLss~~~~~~~a~~~l~~Ll~~a~~ 141 (389)
.|.+.||+|+|++|+.++..+ ++ .+........ -.||-. ..+|+.+.+.+..+++.+.+
T Consensus 2 ~~~lgiDiGtts~k~~l~d~~-G~-i~~~~~~~~~~~~p~~g~~--e~d~~~~~~~i~~~i~~~~~ 63 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDHS-GE-IYSTGQLEHDQIFPRAGWV--EHNPEQIWNNVREVVGLALT 63 (504)
T ss_dssp CEEEEEEECSSEEEEEEECTT-SC-EEEEEEEECCCBCSSTTCC--EECHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecCCcceEEEEECCC-CC-EEEEEEEecceecCCCCce--eECHHHHHHHHHHHHHHHHH
Confidence 377899999999999999743 22 3221001111 123321 23677776666666665543
No 54
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=33.72 E-value=21 Score=34.46 Aligned_cols=48 Identities=10% Similarity=0.166 Sum_probs=29.3
Q ss_pred CceeEEeeCCCeeEEEeecCCCCCccceeeEEecceeEEEEEeecccccHHHHHHHHHHHhhc
Q 016445 221 ETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSS 283 (389)
Q Consensus 221 ~t~giiDlGGaStQIaf~~~~~~~~~~~~~~~l~~~~~~lYs~SfLg~G~~~ar~~~~~~l~~ 283 (389)
....+||||||.|.++.......-... +.| +-.|.+.+.+.+.+.+.+
T Consensus 184 ~~~~vvDiGggTtd~~v~~~~~~~~~~--------------s~s-~~~G~~~~~~~i~~~l~~ 231 (355)
T 3js6_A 184 GKYSVLDFGSGTTIIDTYQNMKRVEEE--------------SFV-INKGTIDFYKRIASHVSK 231 (355)
T ss_dssp CEEEEEEECSSCEEEEEEETTEECGGG--------------CEE-ESCCHHHHHHHHHHHTC-
T ss_pred CcEEEEEeCCCcEEEEEEcCCEEcccc--------------ccC-cchHHHHHHHHHHHHHHH
Confidence 467899999999999876332111111 122 236777777777666544
No 55
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=33.62 E-value=17 Score=35.49 Aligned_cols=39 Identities=13% Similarity=0.138 Sum_probs=24.2
Q ss_pred CceeEEeeCCCeeEEEeecCCCCCccceeeEEecceeEE
Q 016445 221 ETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYN 259 (389)
Q Consensus 221 ~t~giiDlGGaStQIaf~~~~~~~~~~~~~~~l~~~~~~ 259 (389)
.+..|||+|+|.|+|+-..+...-......+.++|...+
T Consensus 152 ~~~lVVDiG~g~T~v~pv~~G~~~~~~~~~~~~GG~~lt 190 (394)
T 1k8k_B 152 LTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDIT 190 (394)
T ss_dssp --CCEEEECSSCEEEECEETTEECSTTCEEESCCHHHHH
T ss_pred ceEEEEEcCCCceEeeeeECCEEcccceEEeeccHHHHH
Confidence 356799999999999866554322222345666765443
No 56
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=32.81 E-value=27 Score=36.44 Aligned_cols=21 Identities=19% Similarity=0.396 Sum_probs=0.0
Q ss_pred eeEEeeCCCeeEEEeecCCCC
Q 016445 223 TGIIELGGASVQVTFVSDEPL 243 (389)
Q Consensus 223 ~giiDlGGaStQIaf~~~~~~ 243 (389)
..+||||||||-++....+..
T Consensus 409 vaiIDmGGGTTd~sVf~~G~l 429 (610)
T 2d0o_A 409 LAILDLGAGSTDASIINPKGD 429 (610)
T ss_dssp EEEEEECSSEEEEEEECTTCC
T ss_pred eEEEEeCCCcceEEEEcCCcE
No 57
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=32.26 E-value=27 Score=36.44 Aligned_cols=21 Identities=29% Similarity=0.469 Sum_probs=0.0
Q ss_pred eeEEeeCCCeeEEEeecCCCC
Q 016445 223 TGIIELGGASVQVTFVSDEPL 243 (389)
Q Consensus 223 ~giiDlGGaStQIaf~~~~~~ 243 (389)
..+||||||||-++....+..
T Consensus 411 vaiIDmGgGTTd~sVf~~g~l 431 (607)
T 1nbw_A 411 LAILDLGAGSTDAAIVNAEGQ 431 (607)
T ss_dssp EEEEEECSSEEEEEEECSSSC
T ss_pred eEEEEeCCCcceEEEEcCCcE
No 58
>2yvc_D Neprilysin; protein-peptide complex, cell adhesion; 3.20A {Mus musculus}
Probab=31.05 E-value=19 Score=21.36 Aligned_cols=24 Identities=25% Similarity=0.188 Sum_probs=14.9
Q ss_pred ccccCCCCcccccCCCCCCCcCCCCCCCCCCCC
Q 016445 9 RINSNMDPIKLHTRPLTRSTNLFSRNPKPTKSN 41 (389)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 41 (389)
|..+|||- . ..+++.|+.+.+||.
T Consensus 2 rsesqmdi-----t----dinapkpkkk~rws~ 25 (26)
T 2yvc_D 2 RSESQMDI-----T----DINAPKPKKKQRXXX 25 (26)
T ss_pred cccccccc-----c----cccCCCcchhhcccc
Confidence 55678854 1 234577887777764
No 59
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=26.42 E-value=76 Score=31.59 Aligned_cols=58 Identities=12% Similarity=0.119 Sum_probs=33.3
Q ss_pred EEEEEeCCCceEEEEEEEeCCCCceeecc---ceeecCCCCcccCCCcchHHHHHHHHHHHHHHh
Q 016445 81 GVLLDGGSTGTRIHVFSYDTETNHFDFDL---GSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRK 142 (389)
Q Consensus 81 ~vVIDaGSsgtRl~Vy~~~~~~~~l~~~~---~~~k~~pGLss~~~~~~~a~~~l~~Ll~~a~~~ 142 (389)
.+.||+|+|++|..++..+ ++ .+.... ....-.||-. ..+|+...+.+..+++.+.+.
T Consensus 2 ~lgiDiGtt~~k~~l~d~~-g~-~l~~~~~~~~~~~p~~g~~--e~d~~~~~~~i~~~i~~~~~~ 62 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQ-GE-VVAAQTEKLTVSRPHPLWS--EQDPEQWWQATDRAMKALGDQ 62 (484)
T ss_dssp EEEEEECSSEEEEEEECTT-SC-EEEEEEEECCCBCSSTTCC--EECHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCcccEEEEECCC-CC-EEEEEEeccccccCCCCCE--eECHHHHHHHHHHHHHHHHHh
Confidence 4689999999999999743 22 332100 1111234432 236777766776666665443
No 60
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=20.32 E-value=56 Score=30.51 Aligned_cols=20 Identities=30% Similarity=0.589 Sum_probs=17.0
Q ss_pred CceeEEeeCCCeeEEEeecC
Q 016445 221 ETTGIIELGGASVQVTFVSD 240 (389)
Q Consensus 221 ~t~giiDlGGaStQIaf~~~ 240 (389)
..+.++|||||.|.++...+
T Consensus 164 ~~~~vvDiGggttd~~v~~~ 183 (320)
T 2zgy_A 164 DSLLIIDLGGTTLDISQVMG 183 (320)
T ss_dssp CEEEEEEECSSCEEEEEEEG
T ss_pred CCEEEEEcCCCeEEEEEEeC
Confidence 46789999999999988753
Done!