Query 016446
Match_columns 389
No_of_seqs 195 out of 502
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 13:43:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016446.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016446hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 5.7E-55 1.9E-59 457.3 44.6 356 4-389 60-565 (611)
2 1nr0_A Actin interacting prote 100.0 2.3E-54 7.8E-59 452.7 41.7 348 3-388 18-476 (611)
3 2ymu_A WD-40 repeat protein; u 100.0 2E-53 6.7E-58 434.4 45.2 310 3-388 262-577 (577)
4 3ow8_A WD repeat-containing pr 100.0 3.8E-53 1.3E-57 409.8 40.4 288 33-389 22-319 (321)
5 1vyh_C Platelet-activating fac 100.0 1.3E-52 4.4E-57 418.6 38.6 294 25-389 91-409 (410)
6 1got_B GT-beta; complex (GTP-b 100.0 8E-52 2.8E-56 401.3 42.5 288 33-388 45-340 (340)
7 2ymu_A WD-40 repeat protein; u 100.0 4.1E-51 1.4E-55 417.3 45.8 310 3-388 221-536 (577)
8 2pbi_B Guanine nucleotide-bind 100.0 2.1E-50 7.1E-55 395.1 43.7 289 33-388 54-354 (354)
9 4g56_B MGC81050 protein; prote 100.0 1.3E-51 4.5E-56 404.6 34.9 307 15-389 18-341 (357)
10 3iz6_a 40S ribosomal protein R 100.0 8.1E-52 2.8E-56 407.8 31.1 304 22-389 45-373 (380)
11 4gqb_B Methylosome protein 50; 100.0 8.4E-51 2.9E-55 399.3 38.3 298 24-389 15-329 (344)
12 2ynn_A Coatomer subunit beta'; 100.0 3.4E-50 1.1E-54 384.1 37.9 285 34-388 4-299 (304)
13 3frx_A Guanine nucleotide-bind 100.0 3.2E-49 1.1E-53 380.3 42.0 297 33-389 7-315 (319)
14 3fm0_A Protein CIAO1; WDR39,SG 100.0 1E-49 3.6E-54 387.8 38.0 291 32-388 4-332 (345)
15 1erj_A Transcriptional repress 100.0 1.2E-48 4.3E-53 386.7 40.4 278 43-388 63-386 (393)
16 1vyh_C Platelet-activating fac 100.0 4.6E-49 1.6E-53 392.9 37.1 276 3-313 108-409 (410)
17 1r5m_A SIR4-interacting protei 100.0 1.1E-48 3.9E-53 379.1 37.7 317 4-389 46-423 (425)
18 2hes_X YDR267CP; beta-propelle 100.0 2.7E-48 9.3E-53 375.6 37.4 289 32-389 3-326 (330)
19 3ow8_A WD repeat-containing pr 100.0 7.7E-48 2.6E-52 372.6 40.4 275 3-313 32-319 (321)
20 4ery_A WD repeat-containing pr 100.0 6E-47 2.1E-51 359.2 42.3 290 33-389 13-310 (312)
21 4aow_A Guanine nucleotide-bind 100.0 2.4E-46 8.3E-51 354.4 42.8 303 29-389 24-335 (340)
22 2oaj_A Protein SNI1; WD40 repe 100.0 4.7E-48 1.6E-52 425.3 35.5 351 3-388 58-658 (902)
23 3sfz_A APAF-1, apoptotic pepti 100.0 7.5E-47 2.6E-51 421.0 45.4 362 3-389 615-1156(1249)
24 2xzm_R RACK1; ribosome, transl 100.0 5.3E-47 1.8E-51 367.3 38.4 297 33-388 11-337 (343)
25 2ynn_A Coatomer subunit beta'; 100.0 8.2E-47 2.8E-51 360.6 39.0 277 3-315 13-302 (304)
26 1got_B GT-beta; complex (GTP-b 100.0 1.8E-46 6E-51 363.8 41.6 276 3-312 55-340 (340)
27 2pm9_A Protein WEB1, protein t 100.0 7E-49 2.4E-53 382.7 24.3 350 5-389 14-412 (416)
28 1gxr_A ESG1, transducin-like e 100.0 1.1E-45 3.8E-50 347.9 41.4 318 3-389 9-335 (337)
29 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-48 3.8E-53 407.4 22.1 311 14-389 174-515 (524)
30 1pgu_A Actin interacting prote 100.0 5.9E-46 2E-50 379.2 41.6 315 4-389 161-612 (615)
31 2pbi_B Guanine nucleotide-bind 100.0 9.3E-46 3.2E-50 362.2 40.5 278 3-312 64-354 (354)
32 4gqb_B Methylosome protein 50; 100.0 1.5E-46 5E-51 369.1 34.7 280 4-318 31-334 (344)
33 2oaj_A Protein SNI1; WD40 repe 100.0 1.7E-46 5.7E-51 413.0 37.3 346 3-389 17-603 (902)
34 3iz6_a 40S ribosomal protein R 100.0 1E-46 3.5E-51 371.4 31.4 283 3-317 66-377 (380)
35 4h5i_A Guanine nucleotide-exch 100.0 2.3E-46 7.8E-51 368.9 33.7 285 45-389 15-341 (365)
36 3frx_A Guanine nucleotide-bind 100.0 3E-45 1E-49 352.6 38.6 282 3-317 17-319 (319)
37 3gre_A Serine/threonine-protei 100.0 4.8E-47 1.6E-51 375.6 26.3 332 27-388 47-437 (437)
38 4g56_B MGC81050 protein; prote 100.0 2.9E-46 9.8E-51 366.7 30.5 281 4-317 43-345 (357)
39 2hes_X YDR267CP; beta-propelle 100.0 9.9E-45 3.4E-49 350.6 37.6 281 3-315 14-328 (330)
40 1erj_A Transcriptional repress 100.0 1E-44 3.5E-49 358.6 37.1 277 3-315 64-389 (393)
41 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.7E-44 5.8E-49 351.0 37.9 284 5-322 18-342 (345)
42 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.2E-43 4E-48 353.8 44.3 303 6-389 122-440 (445)
43 3zwl_B Eukaryotic translation 100.0 7.8E-44 2.7E-48 338.7 41.0 297 35-388 24-343 (369)
44 3sfz_A APAF-1, apoptotic pepti 100.0 9.3E-46 3.2E-50 412.2 30.2 313 4-389 841-1247(1249)
45 3vl1_A 26S proteasome regulato 100.0 4.4E-45 1.5E-49 357.7 31.0 311 8-389 61-417 (420)
46 3ei3_B DNA damage-binding prot 100.0 1E-44 3.5E-49 352.8 33.3 305 27-389 57-380 (383)
47 3dm0_A Maltose-binding peripla 100.0 6.4E-44 2.2E-48 377.6 41.6 304 36-389 375-691 (694)
48 2xzm_R RACK1; ribosome, transl 100.0 7E-44 2.4E-48 345.4 36.0 275 4-317 22-342 (343)
49 3v7d_B Cell division control p 100.0 4.1E-43 1.4E-47 350.0 42.1 306 6-387 125-459 (464)
50 3odt_A Protein DOA1; ubiquitin 100.0 9.5E-43 3.2E-47 325.3 41.5 279 33-389 8-294 (313)
51 4ery_A WD repeat-containing pr 100.0 7.6E-43 2.6E-47 331.0 41.0 277 3-313 23-310 (312)
52 1pgu_A Actin interacting prote 100.0 4.3E-43 1.5E-47 358.0 40.3 348 3-388 18-399 (615)
53 2pm7_B Protein transport prote 100.0 4.5E-44 1.5E-48 340.6 30.5 236 99-388 8-282 (297)
54 3k26_A Polycomb protein EED; W 100.0 5.2E-44 1.8E-48 340.3 29.9 291 35-389 9-364 (366)
55 3i2n_A WD repeat-containing pr 100.0 1.4E-43 4.9E-48 336.8 32.4 286 39-389 14-351 (357)
56 4ggc_A P55CDC, cell division c 100.0 7.2E-43 2.5E-47 327.5 35.7 274 47-389 28-313 (318)
57 1r5m_A SIR4-interacting protei 100.0 8.5E-43 2.9E-47 337.8 37.3 299 22-389 24-359 (425)
58 4e54_B DNA damage-binding prot 100.0 4.1E-44 1.4E-48 358.3 28.4 302 34-389 110-428 (435)
59 1sq9_A Antiviral protein SKI8; 100.0 4.9E-43 1.7E-47 340.0 34.7 301 35-389 8-393 (397)
60 2w18_A PALB2, fancn, partner a 100.0 2.6E-43 9E-48 350.1 33.3 267 16-388 56-354 (356)
61 4aow_A Guanine nucleotide-bind 100.0 4.1E-42 1.4E-46 325.3 39.5 278 3-317 38-339 (340)
62 3mkq_A Coatomer beta'-subunit; 100.0 3.9E-42 1.3E-46 365.0 42.6 278 3-317 13-304 (814)
63 3bg1_A Protein SEC13 homolog; 100.0 5.8E-44 2E-48 343.2 24.1 235 99-388 12-290 (316)
64 1k8k_C P40, ARP2/3 complex 41 100.0 1.7E-42 5.7E-47 332.0 33.9 306 40-388 5-358 (372)
65 4gga_A P55CDC, cell division c 100.0 2.1E-42 7.3E-47 343.9 36.0 273 47-389 108-393 (420)
66 2pm9_A Protein WEB1, protein t 100.0 5.1E-44 1.7E-48 348.3 23.2 282 45-389 13-335 (416)
67 4a11_B DNA excision repair pro 100.0 8.7E-43 3E-47 336.6 31.6 307 20-388 20-362 (408)
68 3vl1_A 26S proteasome regulato 100.0 6.8E-43 2.3E-47 342.2 27.8 272 47-388 59-362 (420)
69 4h5i_A Guanine nucleotide-exch 100.0 2E-42 6.7E-47 340.8 30.1 279 5-315 16-343 (365)
70 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-43 4.5E-48 369.2 21.2 265 32-389 123-426 (524)
71 1sq9_A Antiviral protein SKI8; 100.0 2.9E-41 9.8E-46 327.5 34.4 284 3-317 16-397 (397)
72 3dwl_C Actin-related protein 2 100.0 4E-43 1.4E-47 339.6 20.4 308 44-389 11-377 (377)
73 2j04_A TAU60, YPL007P, hypothe 100.0 1.2E-42 4E-47 364.5 24.9 303 3-380 15-350 (588)
74 3zwl_B Eukaryotic translation 100.0 1.2E-40 4.2E-45 316.6 36.0 284 3-324 32-355 (369)
75 3dm0_A Maltose-binding peripla 100.0 1.5E-40 5.1E-45 351.8 39.7 279 3-314 382-692 (694)
76 1gxr_A ESG1, transducin-like e 100.0 1.1E-40 3.8E-45 313.8 33.6 274 44-389 9-294 (337)
77 3vu4_A KMHSV2; beta-propeller 100.0 1.4E-40 4.7E-45 325.6 34.5 303 27-388 3-333 (355)
78 3k26_A Polycomb protein EED; W 100.0 2.1E-41 7.2E-46 322.3 27.5 276 3-315 18-366 (366)
79 2pm7_B Protein transport prote 100.0 1.2E-40 4.3E-45 316.8 31.5 247 36-314 2-284 (297)
80 1k8k_C P40, ARP2/3 complex 41 100.0 1.3E-40 4.3E-45 318.9 31.5 282 3-318 8-364 (372)
81 4gga_A P55CDC, cell division c 100.0 6.1E-40 2.1E-44 326.1 37.2 275 13-326 116-406 (420)
82 3mmy_A MRNA export factor; mRN 100.0 3.8E-40 1.3E-44 313.1 34.0 298 24-388 20-343 (368)
83 3ei3_B DNA damage-binding prot 100.0 2.6E-40 8.9E-45 321.7 33.4 275 4-315 74-382 (383)
84 4aez_A CDC20, WD repeat-contai 100.0 7.9E-40 2.7E-44 322.9 36.8 273 47-389 96-378 (401)
85 1yfq_A Cell cycle arrest prote 100.0 6.7E-41 2.3E-45 317.9 27.8 282 39-387 7-320 (342)
86 3v7d_B Cell division control p 100.0 2.7E-39 9.3E-44 322.4 40.7 277 34-389 112-419 (464)
87 3i2n_A WD repeat-containing pr 100.0 1.1E-40 3.6E-45 317.0 28.9 282 3-319 18-357 (357)
88 3dw8_B Serine/threonine-protei 100.0 2.8E-40 9.6E-45 325.5 31.6 315 43-388 27-443 (447)
89 3odt_A Protein DOA1; ubiquitin 100.0 6.9E-39 2.4E-43 299.1 39.4 279 3-323 18-304 (313)
90 3bg1_A Protein SEC13 homolog; 100.0 3.7E-41 1.3E-45 323.7 24.3 255 39-326 9-307 (316)
91 3mkq_A Coatomer beta'-subunit; 100.0 1.1E-39 3.7E-44 346.2 36.4 284 35-388 5-299 (814)
92 3f3f_A Nucleoporin SEH1; struc 100.0 1.3E-39 4.5E-44 304.6 32.1 270 98-388 9-334 (351)
93 4ggc_A P55CDC, cell division c 100.0 2E-38 6.8E-43 297.3 38.8 269 9-316 31-316 (318)
94 4e54_B DNA damage-binding prot 100.0 8.2E-41 2.8E-45 334.4 23.3 279 4-319 120-434 (435)
95 4a11_B DNA excision repair pro 100.0 2.8E-39 9.5E-44 312.1 32.9 288 3-326 43-376 (408)
96 3dwl_C Actin-related protein 2 100.0 2.9E-41 9.8E-46 326.6 18.8 232 101-388 12-279 (377)
97 4aez_A CDC20, WD repeat-contai 100.0 1.5E-38 5E-43 313.9 38.2 280 9-326 99-391 (401)
98 1l0q_A Surface layer protein; 100.0 9.3E-38 3.2E-42 303.4 43.2 275 13-326 2-286 (391)
99 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.3E-38 8E-43 315.6 39.7 282 28-389 103-389 (445)
100 1p22_A F-BOX/WD-repeat protein 100.0 3.9E-39 1.3E-43 321.3 32.9 264 44-389 133-412 (435)
101 1p22_A F-BOX/WD-repeat protein 100.0 6E-39 2E-43 319.9 33.8 275 4-325 134-424 (435)
102 3gre_A Serine/threonine-protei 100.0 1E-38 3.5E-43 315.8 32.4 279 3-312 63-437 (437)
103 3jrp_A Fusion protein of prote 100.0 1.4E-38 4.8E-43 304.2 32.0 236 98-388 9-284 (379)
104 3bws_A Protein LP49; two-domai 100.0 6.8E-38 2.3E-42 308.4 34.9 311 19-388 95-429 (433)
105 3f3f_A Nucleoporin SEH1; struc 100.0 4.3E-38 1.5E-42 294.3 31.7 256 39-326 7-351 (351)
106 2j04_A TAU60, YPL007P, hypothe 100.0 1.5E-39 5.1E-44 341.0 24.2 254 44-388 15-294 (588)
107 3dw8_B Serine/threonine-protei 100.0 5.1E-39 1.8E-43 316.5 25.9 254 99-389 27-371 (447)
108 4gq1_A NUP37; propeller, trans 100.0 1.9E-38 6.4E-43 314.6 27.1 227 106-387 95-388 (393)
109 3jrp_A Fusion protein of prote 100.0 6.7E-38 2.3E-42 299.5 29.9 253 33-319 1-291 (379)
110 3mmy_A MRNA export factor; mRN 100.0 3.7E-37 1.3E-41 292.5 33.1 282 3-319 39-353 (368)
111 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6.6E-37 2.2E-41 307.0 34.8 236 102-388 104-388 (450)
112 2aq5_A Coronin-1A; WD40 repeat 100.0 9.8E-38 3.3E-42 307.1 25.9 278 47-388 37-339 (402)
113 3vu4_A KMHSV2; beta-propeller 100.0 9.5E-37 3.2E-41 298.3 30.3 227 99-389 18-269 (355)
114 1l0q_A Surface layer protein; 100.0 2.7E-35 9.1E-40 286.1 38.4 258 66-389 8-273 (391)
115 1nir_A Nitrite reductase; hemo 100.0 8.2E-36 2.8E-40 311.0 37.1 319 13-389 149-512 (543)
116 3lrv_A PRE-mRNA-splicing facto 100.0 1.1E-37 3.8E-42 301.4 20.9 224 111-388 46-289 (343)
117 2aq5_A Coronin-1A; WD40 repeat 100.0 9.6E-37 3.3E-41 300.0 26.7 271 17-319 51-346 (402)
118 1yfq_A Cell cycle arrest prote 100.0 3.8E-36 1.3E-40 285.2 29.8 262 3-294 11-313 (342)
119 3lrv_A PRE-mRNA-splicing facto 100.0 2.4E-36 8.3E-41 291.9 26.6 259 52-387 44-329 (343)
120 2xyi_A Probable histone-bindin 100.0 3E-35 1E-39 294.1 32.2 237 98-388 126-407 (430)
121 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.6E-35 1.2E-39 294.3 30.1 250 104-388 8-336 (450)
122 4gq1_A NUP37; propeller, trans 100.0 1.3E-35 4.5E-40 294.1 25.2 237 46-313 91-387 (393)
123 3jro_A Fusion protein of prote 100.0 1.8E-35 6.2E-40 318.0 25.1 237 98-389 7-283 (753)
124 3bws_A Protein LP49; two-domai 100.0 2.7E-33 9.1E-38 275.6 36.3 273 6-314 125-431 (433)
125 2w18_A PALB2, fancn, partner a 100.0 1.6E-34 5.5E-39 287.0 27.1 209 45-313 112-355 (356)
126 2hqs_A Protein TOLB; TOLB, PAL 100.0 1E-32 3.5E-37 276.5 35.3 296 14-373 76-410 (415)
127 3jro_A Fusion protein of prote 100.0 3.7E-34 1.3E-38 307.8 24.1 247 37-317 3-287 (753)
128 2ecf_A Dipeptidyl peptidase IV 100.0 3.5E-33 1.2E-37 295.0 29.3 314 4-388 37-456 (741)
129 1nir_A Nitrite reductase; hemo 100.0 1.5E-31 5.1E-36 278.9 34.7 295 6-326 181-525 (543)
130 2xyi_A Probable histone-bindin 100.0 3.5E-32 1.2E-36 271.8 27.8 246 38-317 123-412 (430)
131 2hqs_A Protein TOLB; TOLB, PAL 100.0 8.8E-31 3E-35 262.5 29.8 287 45-388 63-384 (415)
132 1xfd_A DIP, dipeptidyl aminope 100.0 5.2E-32 1.8E-36 284.9 21.5 320 5-379 18-428 (723)
133 2z3z_A Dipeptidyl aminopeptida 100.0 8.6E-31 2.9E-35 275.7 28.8 309 11-388 33-432 (706)
134 1pby_B Quinohemoprotein amine 100.0 4.4E-30 1.5E-34 241.9 30.6 276 13-326 1-321 (337)
135 3vgz_A Uncharacterized protein 100.0 6.9E-29 2.4E-33 236.2 39.2 274 45-381 41-334 (353)
136 1k32_A Tricorn protease; prote 100.0 5.3E-30 1.8E-34 284.0 35.7 327 4-388 53-499 (1045)
137 1k32_A Tricorn protease; prote 100.0 9.4E-30 3.2E-34 282.0 36.0 315 4-389 15-459 (1045)
138 3u4y_A Uncharacterized protein 100.0 2.8E-28 9.5E-33 231.4 37.1 282 13-326 10-314 (331)
139 2ecf_A Dipeptidyl peptidase IV 100.0 8.2E-30 2.8E-34 269.2 26.5 279 45-388 37-410 (741)
140 1xfd_A DIP, dipeptidyl aminope 100.0 5.6E-30 1.9E-34 269.3 21.9 277 46-388 18-390 (723)
141 3u4y_A Uncharacterized protein 100.0 4.5E-28 1.5E-32 229.9 32.5 279 50-389 3-302 (331)
142 1ri6_A Putative isomerase YBHE 100.0 8.4E-28 2.9E-32 226.8 33.2 277 14-324 5-321 (343)
143 3o4h_A Acylamino-acid-releasin 100.0 2.8E-29 9.5E-34 259.5 21.9 276 33-388 10-312 (582)
144 1pby_B Quinohemoprotein amine 100.0 1.8E-27 6.1E-32 224.0 28.6 250 76-389 11-308 (337)
145 2ojh_A Uncharacterized protein 100.0 4.6E-28 1.6E-32 222.0 23.9 257 76-382 22-293 (297)
146 1z68_A Fibroblast activation p 100.0 3E-29 1E-33 264.8 18.0 318 8-388 20-440 (719)
147 1ri6_A Putative isomerase YBHE 100.0 7.6E-27 2.6E-31 220.2 32.4 257 76-388 15-305 (343)
148 3o4h_A Acylamino-acid-releasin 100.0 7.2E-28 2.5E-32 248.9 26.1 279 3-322 21-320 (582)
149 2z3z_A Dipeptidyl aminopeptida 100.0 1.1E-26 3.7E-31 244.4 33.4 286 4-322 82-441 (706)
150 3vgz_A Uncharacterized protein 100.0 4.7E-26 1.6E-30 216.6 31.2 238 101-389 41-301 (353)
151 2ojh_A Uncharacterized protein 100.0 6.8E-27 2.3E-31 214.2 24.0 250 18-294 17-292 (297)
152 3hfq_A Uncharacterized protein 100.0 4.2E-25 1.4E-29 212.0 36.3 274 15-320 4-324 (347)
153 3hfq_A Uncharacterized protein 100.0 1.3E-25 4.6E-30 215.4 32.7 262 76-388 16-314 (347)
154 3pe7_A Oligogalacturonate lyas 99.9 4.8E-26 1.7E-30 220.6 27.4 319 27-388 14-379 (388)
155 1z68_A Fibroblast activation p 99.9 1.4E-27 4.8E-32 252.1 16.6 272 48-388 19-388 (719)
156 1jmx_B Amine dehydrogenase; ox 99.9 2E-25 6.8E-30 211.5 29.1 266 13-325 11-335 (349)
157 1jmx_B Amine dehydrogenase; ox 99.9 6.3E-26 2.2E-30 214.9 25.4 230 105-389 4-323 (349)
158 3scy_A Hypothetical bacterial 99.9 2.7E-24 9.2E-29 207.8 32.1 258 76-388 27-334 (361)
159 3scy_A Hypothetical bacterial 99.9 2E-23 6.9E-28 201.6 34.6 276 15-322 15-346 (361)
160 3c5m_A Oligogalacturonate lyas 99.9 8E-25 2.7E-29 211.3 21.3 316 27-388 14-379 (396)
161 4a5s_A Dipeptidyl peptidase 4 99.9 1.3E-23 4.4E-28 224.7 32.6 322 4-379 17-434 (740)
162 1jof_A Carboxy-CIS,CIS-muconat 99.9 3.4E-23 1.1E-27 202.4 31.0 269 15-316 4-342 (365)
163 1jof_A Carboxy-CIS,CIS-muconat 99.9 5.5E-24 1.9E-28 208.0 24.4 245 102-388 41-338 (365)
164 4a5s_A Dipeptidyl peptidase 4 99.9 6.2E-25 2.1E-29 234.9 17.8 255 76-388 3-350 (740)
165 3azo_A Aminopeptidase; POP fam 99.9 2E-23 6.9E-28 217.9 27.1 293 4-326 24-380 (662)
166 1q7f_A NHL, brain tumor CG1071 99.9 5.3E-22 1.8E-26 185.6 32.7 238 99-389 28-278 (286)
167 2oiz_A Aromatic amine dehydrog 99.9 5E-22 1.7E-26 195.7 34.1 292 21-374 29-361 (361)
168 2oit_A Nucleoporin 214KDA; NH2 99.9 2.2E-23 7.4E-28 211.0 23.6 204 104-316 40-279 (434)
169 3fvz_A Peptidyl-glycine alpha- 99.9 1.6E-21 5.4E-26 188.4 32.1 244 99-388 22-319 (329)
170 2oit_A Nucleoporin 214KDA; NH2 99.9 6E-23 2.1E-27 207.8 19.5 211 123-388 23-275 (434)
171 3pe7_A Oligogalacturonate lyas 99.9 2.5E-22 8.6E-27 194.4 22.1 277 9-313 41-380 (388)
172 2gop_A Trilobed protease; beta 99.9 2.2E-20 7.4E-25 178.4 33.7 265 45-388 15-328 (347)
173 2gop_A Trilobed protease; beta 99.9 8.2E-20 2.8E-24 174.4 32.2 273 6-326 17-340 (347)
174 3azo_A Aminopeptidase; POP fam 99.9 2.1E-20 7E-25 195.1 28.9 286 38-388 18-364 (662)
175 2oiz_A Aromatic amine dehydrog 99.9 2.6E-20 8.8E-25 183.5 24.9 263 76-389 31-332 (361)
176 3c5m_A Oligogalacturonate lyas 99.9 5.8E-21 2E-25 184.2 19.3 281 6-318 38-387 (396)
177 2xdw_A Prolyl endopeptidase; a 99.9 3.9E-19 1.3E-23 189.0 35.2 257 45-326 125-426 (710)
178 3fvz_A Peptidyl-glycine alpha- 99.9 1.4E-19 4.9E-24 174.6 28.8 237 4-259 24-323 (329)
179 2bkl_A Prolyl endopeptidase; m 99.9 9.2E-20 3.2E-24 193.5 29.5 285 12-326 78-407 (695)
180 1q7f_A NHL, brain tumor CG1071 99.9 5.6E-19 1.9E-23 165.0 30.9 236 45-316 30-281 (286)
181 2dg1_A DRP35, lactonase; beta 99.8 4.4E-19 1.5E-23 169.0 25.9 271 45-381 6-300 (333)
182 2xdw_A Prolyl endopeptidase; a 99.8 5.6E-19 1.9E-23 187.7 28.4 275 53-388 80-411 (710)
183 3e5z_A Putative gluconolactona 99.8 1.3E-18 4.5E-23 163.8 27.5 227 99-386 26-282 (296)
184 1yr2_A Prolyl oligopeptidase; 99.8 6.7E-18 2.3E-22 180.7 32.8 285 13-324 118-449 (741)
185 2bkl_A Prolyl endopeptidase; m 99.8 3.9E-19 1.3E-23 188.6 21.9 276 51-389 74-395 (695)
186 2dg1_A DRP35, lactonase; beta 99.8 2E-17 6.7E-22 157.5 31.1 269 2-293 4-299 (333)
187 3no2_A Uncharacterized protein 99.8 2E-17 6.7E-22 157.7 28.2 214 113-379 5-231 (276)
188 1qks_A Cytochrome CD1 nitrite 99.8 2.1E-16 7.2E-21 166.0 38.5 320 13-388 167-535 (567)
189 3dsm_A Uncharacterized protein 99.8 1.9E-16 6.7E-21 153.2 31.9 269 21-324 15-310 (328)
190 2z2n_A Virginiamycin B lyase; 99.8 4.1E-15 1.4E-19 137.6 38.8 267 45-386 15-291 (299)
191 3e5z_A Putative gluconolactona 99.8 1.7E-16 5.7E-21 149.4 28.5 234 33-293 17-276 (296)
192 1yr2_A Prolyl oligopeptidase; 99.8 2.9E-17 9.9E-22 175.7 25.6 275 52-388 114-438 (741)
193 1rwi_B Serine/threonine-protei 99.8 1.4E-16 4.9E-21 146.5 24.9 230 102-388 25-261 (270)
194 3dsm_A Uncharacterized protein 99.8 1.4E-15 4.7E-20 147.2 31.5 247 6-281 46-319 (328)
195 3hrp_A Uncharacterized protein 99.7 1.1E-15 3.9E-20 153.5 30.2 254 99-388 129-407 (409)
196 3no2_A Uncharacterized protein 99.7 5.8E-16 2E-20 147.5 26.1 232 13-270 5-265 (276)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 3E-15 1E-19 140.3 28.5 232 99-388 16-296 (314)
198 2z2n_A Virginiamycin B lyase; 99.7 6.3E-14 2.1E-18 129.6 36.9 272 4-317 15-297 (299)
199 2qe8_A Uncharacterized protein 99.7 3.7E-16 1.3E-20 151.9 20.0 272 37-384 10-314 (343)
200 1rwi_B Serine/threonine-protei 99.7 6.1E-15 2.1E-19 135.5 25.1 249 33-317 11-266 (270)
201 1qks_A Cytochrome CD1 nitrite 99.7 4.1E-14 1.4E-18 148.6 33.5 258 76-388 177-474 (567)
202 2mad_H Methylamine dehydrogena 99.7 2.3E-13 7.9E-18 135.2 36.5 277 13-322 32-357 (373)
203 3g4e_A Regucalcin; six bladed 99.7 9.1E-14 3.1E-18 131.9 31.6 221 103-380 15-261 (297)
204 3iuj_A Prolyl endopeptidase; h 99.7 3.6E-14 1.2E-18 151.1 29.5 254 44-325 128-414 (693)
205 2qc5_A Streptogramin B lactona 99.7 1.6E-12 5.4E-17 120.2 35.5 261 45-379 20-290 (300)
206 2mad_H Methylamine dehydrogena 99.6 7.9E-13 2.7E-17 131.4 35.0 283 50-389 26-348 (373)
207 3iuj_A Prolyl endopeptidase; h 99.6 1E-14 3.4E-19 155.3 22.1 233 103-388 131-402 (693)
208 3sjl_D Methylamine dehydrogena 99.6 3.5E-13 1.2E-17 135.5 30.6 287 13-324 44-372 (386)
209 2qc5_A Streptogramin B lactona 99.6 7.4E-12 2.5E-16 115.6 33.8 228 101-388 20-257 (300)
210 2ghs_A AGR_C_1268P; regucalcin 99.6 3.5E-12 1.2E-16 123.1 31.3 219 103-380 51-291 (326)
211 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 7.7E-13 2.6E-17 123.9 25.9 231 6-257 20-298 (314)
212 2qe8_A Uncharacterized protein 99.6 5E-14 1.7E-18 136.8 16.4 233 101-388 17-275 (343)
213 3sjl_D Methylamine dehydrogena 99.6 6.7E-13 2.3E-17 133.4 24.3 288 45-388 33-360 (386)
214 3hrp_A Uncharacterized protein 99.5 3.9E-12 1.4E-16 127.6 29.0 234 45-313 131-408 (409)
215 1yiq_A Quinohemoprotein alcoho 99.5 1.6E-12 5.6E-17 139.1 27.6 280 12-326 69-516 (689)
216 3dr2_A Exported gluconolactona 99.5 3.5E-12 1.2E-16 121.2 27.1 226 99-386 43-302 (305)
217 3g4e_A Regucalcin; six bladed 99.5 2.3E-11 7.9E-16 115.3 32.4 225 44-293 12-261 (297)
218 1xip_A Nucleoporin NUP159; bet 99.5 2.5E-13 8.4E-18 136.7 18.8 169 103-294 40-234 (388)
219 3c75_H MADH, methylamine dehyd 99.5 8.9E-12 3.1E-16 126.7 30.0 274 23-322 99-409 (426)
220 1kb0_A Quinohemoprotein alcoho 99.5 8.6E-12 2.9E-16 133.3 30.1 280 11-326 75-518 (677)
221 1mda_H Methylamine dehydrogena 99.5 7.8E-13 2.7E-17 132.0 20.6 284 13-326 32-357 (368)
222 2hz6_A Endoplasmic reticulum t 99.5 4.7E-15 1.6E-19 146.6 4.4 186 112-324 8-201 (369)
223 3q7m_A Lipoprotein YFGL, BAMB; 99.5 1.6E-10 5.4E-15 112.2 35.2 272 10-324 50-346 (376)
224 2ghs_A AGR_C_1268P; regucalcin 99.5 1.7E-10 5.8E-15 111.2 33.3 224 45-293 49-291 (326)
225 3hxj_A Pyrrolo-quinoline quino 99.4 1.4E-11 4.7E-16 116.1 22.9 289 12-387 29-320 (330)
226 3c75_H MADH, methylamine dehyd 99.4 1.7E-11 5.9E-16 124.7 25.1 278 53-388 81-399 (426)
227 1yiq_A Quinohemoprotein alcoho 99.4 3.6E-11 1.2E-15 128.7 28.1 269 76-388 80-502 (689)
228 3dr2_A Exported gluconolactona 99.4 8.1E-11 2.8E-15 111.8 27.0 233 33-293 34-296 (305)
229 1xip_A Nucleoporin NUP159; bet 99.4 8.5E-12 2.9E-16 125.5 18.0 168 142-377 38-230 (388)
230 1kb0_A Quinohemoprotein alcoho 99.4 1E-10 3.5E-15 124.9 26.4 244 105-388 123-504 (677)
231 2hz6_A Endoplasmic reticulum t 99.3 6.5E-13 2.2E-17 131.2 2.1 147 151-324 8-158 (369)
232 1mda_H Methylamine dehydrogena 99.2 9.3E-11 3.2E-15 117.0 15.6 255 77-389 47-344 (368)
233 1kv9_A Type II quinohemoprotei 99.2 9.4E-09 3.2E-13 109.5 27.6 280 11-326 64-499 (668)
234 3q7m_A Lipoprotein YFGL, BAMB; 99.1 2.9E-08 9.8E-13 96.2 27.6 256 9-312 99-375 (376)
235 2ad6_A Methanol dehydrogenase 99.1 8.1E-08 2.8E-12 100.5 31.3 279 12-326 61-505 (571)
236 1fwx_A Nitrous oxide reductase 99.1 3E-09 1E-13 111.9 18.9 261 16-326 18-382 (595)
237 1kv9_A Type II quinohemoprotei 99.1 2.4E-08 8.2E-13 106.4 25.2 267 77-388 77-485 (668)
238 2iwa_A Glutamine cyclotransfer 99.1 4.9E-08 1.7E-12 93.3 24.7 216 133-385 9-231 (266)
239 3hxj_A Pyrrolo-quinoline quino 99.1 1.9E-08 6.4E-13 94.5 21.6 256 7-314 63-323 (330)
240 2iwa_A Glutamine cyclotransfer 99.1 5.3E-08 1.8E-12 93.1 24.4 194 103-314 23-236 (266)
241 2p4o_A Hypothetical protein; p 99.0 4.8E-07 1.6E-11 86.0 30.4 222 101-381 32-278 (306)
242 1w6s_A Methanol dehydrogenase 99.0 2.7E-07 9.1E-12 97.5 30.7 281 12-326 61-514 (599)
243 1npe_A Nidogen, entactin; glyc 99.0 6.4E-07 2.2E-11 82.9 29.6 201 101-324 36-247 (267)
244 4a2l_A BT_4663, two-component 99.0 8.6E-06 2.9E-10 87.4 41.5 312 6-384 175-520 (795)
245 1npe_A Nidogen, entactin; glyc 99.0 9.2E-07 3.2E-11 81.8 29.5 191 114-322 2-205 (267)
246 2ece_A 462AA long hypothetical 99.0 1.5E-07 5.1E-12 96.2 25.7 201 111-323 93-363 (462)
247 1flg_A Protein (quinoprotein e 99.0 9.1E-07 3.1E-11 92.9 32.3 281 12-326 67-527 (582)
248 4a2l_A BT_4663, two-component 99.0 6.1E-06 2.1E-10 88.5 39.3 311 6-383 133-473 (795)
249 2fp8_A Strictosidine synthase; 99.0 4.4E-07 1.5E-11 86.5 27.2 243 100-388 18-310 (322)
250 3nol_A Glutamine cyclotransfer 98.9 1.8E-07 6.1E-12 89.2 22.8 180 104-293 46-244 (262)
251 3nol_A Glutamine cyclotransfer 98.9 2.8E-07 9.7E-12 87.9 23.0 208 133-380 31-244 (262)
252 2xe4_A Oligopeptidase B; hydro 98.9 3.2E-07 1.1E-11 98.8 25.7 248 46-323 175-465 (751)
253 3mbr_X Glutamine cyclotransfer 98.9 9.5E-07 3.2E-11 83.3 25.0 208 133-379 9-222 (243)
254 2ece_A 462AA long hypothetical 98.9 2.2E-06 7.7E-11 87.6 29.2 235 13-292 96-399 (462)
255 3v9f_A Two-component system se 98.9 1.4E-05 4.8E-10 85.6 36.7 311 4-384 258-605 (781)
256 3mbr_X Glutamine cyclotransfer 98.8 1.5E-06 5.1E-11 82.0 25.1 179 104-292 24-222 (243)
257 3nok_A Glutaminyl cyclase; bet 98.8 4.9E-07 1.7E-11 86.4 21.9 204 134-379 44-253 (268)
258 3nok_A Glutaminyl cyclase; bet 98.8 7E-07 2.4E-11 85.3 22.7 179 104-292 58-253 (268)
259 2p4o_A Hypothetical protein; p 98.8 5.3E-06 1.8E-10 78.7 28.5 232 32-293 21-277 (306)
260 1fwx_A Nitrous oxide reductase 98.8 2.1E-07 7E-12 98.0 19.0 236 13-259 101-432 (595)
261 1k3i_A Galactose oxidase precu 98.7 1.6E-06 5.5E-11 91.5 24.1 291 49-380 190-530 (656)
262 2ad6_A Methanol dehydrogenase 98.7 3E-06 1E-10 88.7 24.3 262 10-292 112-525 (571)
263 1k3i_A Galactose oxidase precu 98.7 5.9E-06 2E-10 87.2 26.4 266 12-293 197-530 (656)
264 2fp8_A Strictosidine synthase; 98.7 2.2E-05 7.6E-10 74.5 28.0 195 101-314 80-312 (322)
265 3v9f_A Two-component system se 98.7 0.00026 8.8E-09 75.7 38.6 321 4-388 211-565 (781)
266 1w6s_A Methanol dehydrogenase 98.6 9.9E-06 3.4E-10 85.5 26.4 217 105-323 110-470 (599)
267 1flg_A Protein (quinoprotein e 98.6 8.2E-06 2.8E-10 85.6 25.1 180 78-266 80-364 (582)
268 2xe4_A Oligopeptidase B; hydro 98.6 5.7E-07 2E-11 96.8 16.1 153 103-257 176-353 (751)
269 3tc9_A Hypothetical hydrolase; 98.6 2.9E-05 9.9E-10 78.2 27.7 254 100-387 136-426 (430)
270 4hw6_A Hypothetical protein, I 98.5 5.1E-05 1.8E-09 76.6 27.8 255 99-388 137-430 (433)
271 3v65_B Low-density lipoprotein 98.5 0.00012 4E-09 72.5 28.8 207 99-325 114-328 (386)
272 3tc9_A Hypothetical hydrolase; 98.5 0.00025 8.6E-09 71.3 31.3 230 13-257 149-429 (430)
273 3v64_C Agrin; beta propeller, 98.5 0.00019 6.5E-09 70.0 28.6 207 99-325 71-285 (349)
274 3v64_C Agrin; beta propeller, 98.5 0.00029 1E-08 68.6 29.8 182 122-321 52-239 (349)
275 3v65_B Low-density lipoprotein 98.5 0.00014 4.7E-09 72.0 27.6 190 111-321 86-282 (386)
276 1ijq_A LDL receptor, low-densi 98.4 0.00034 1.1E-08 67.0 29.5 183 122-322 9-201 (316)
277 2xbg_A YCF48-like protein; pho 98.4 0.00038 1.3E-08 66.9 29.6 262 4-312 36-319 (327)
278 2xbg_A YCF48-like protein; pho 98.4 0.00059 2E-08 65.6 30.7 268 44-388 35-319 (327)
279 1ijq_A LDL receptor, low-densi 98.4 0.00097 3.3E-08 63.7 30.8 206 99-325 28-248 (316)
280 3kya_A Putative phosphatase; s 98.4 9.7E-05 3.3E-09 76.3 25.2 260 99-388 137-472 (496)
281 2ism_A Putative oxidoreductase 98.3 0.00019 6.7E-09 70.1 25.1 142 100-247 30-221 (352)
282 4hw6_A Hypothetical protein, I 98.3 0.00054 1.8E-08 69.1 28.4 233 8-256 143-431 (433)
283 3p5b_L Low density lipoprotein 98.2 0.0043 1.5E-07 61.6 31.9 208 99-325 110-330 (400)
284 3kya_A Putative phosphatase; s 98.2 0.0017 5.9E-08 67.0 29.3 241 14-264 153-482 (496)
285 3sov_A LRP-6, low-density lipo 98.2 0.0023 8E-08 61.6 28.7 205 101-325 35-248 (318)
286 3p5b_L Low density lipoprotein 98.1 0.0033 1.1E-07 62.4 29.2 182 122-322 91-283 (400)
287 3a9g_A Putative uncharacterize 98.1 0.0034 1.2E-07 61.4 27.7 143 99-247 27-216 (354)
288 3amr_A 3-phytase; beta-propell 98.0 0.0015 5.3E-08 64.5 24.7 192 114-323 41-272 (355)
289 3m0c_C LDL receptor, low-densi 97.8 0.018 6.2E-07 62.6 30.7 214 99-332 422-649 (791)
290 3s94_A LRP-6, low-density lipo 97.8 0.062 2.1E-06 56.5 37.7 283 8-323 88-430 (619)
291 3qqz_A Putative uncharacterize 97.8 0.012 4.2E-07 55.3 24.3 183 103-293 29-242 (255)
292 1n7d_A LDL receptor, low-densi 97.7 0.00032 1.1E-08 75.0 14.4 213 100-332 405-631 (699)
293 1n7d_A LDL receptor, low-densi 97.7 0.00014 4.6E-09 78.0 11.3 184 121-322 384-577 (699)
294 3m0c_C LDL receptor, low-densi 97.7 0.033 1.1E-06 60.5 30.1 184 121-322 402-595 (791)
295 3qqz_A Putative uncharacterize 97.7 0.016 5.4E-07 54.6 23.4 190 39-247 22-242 (255)
296 3sov_A LRP-6, low-density lipo 97.6 0.048 1.6E-06 52.3 31.3 226 22-266 12-247 (318)
297 4a0p_A LRP6, LRP-6, low-densit 97.6 0.049 1.7E-06 57.4 29.5 177 121-315 13-197 (628)
298 3das_A Putative oxidoreductase 97.6 0.061 2.1E-06 52.8 28.0 147 99-249 30-224 (347)
299 3s94_A LRP-6, low-density lipo 97.6 0.019 6.6E-07 60.4 26.0 207 100-326 39-254 (619)
300 2g8s_A Glucose/sorbosone dehyd 97.6 0.036 1.2E-06 53.8 25.9 143 99-247 16-216 (353)
301 4a0p_A LRP6, LRP-6, low-densit 97.6 0.039 1.3E-06 58.2 27.9 202 101-324 37-246 (628)
302 3amr_A 3-phytase; beta-propell 97.2 0.042 1.4E-06 54.3 20.9 171 165-388 50-260 (355)
303 2ism_A Putative oxidoreductase 97.2 0.042 1.4E-06 53.3 20.6 138 142-291 31-220 (352)
304 3a9g_A Putative uncharacterize 97.2 0.068 2.3E-06 52.0 21.8 138 142-291 29-215 (354)
305 1cru_A Protein (soluble quinop 96.7 0.11 3.6E-06 52.6 19.6 60 99-159 25-98 (454)
306 3sre_A PON1, serum paraoxonase 96.6 0.49 1.7E-05 46.4 23.2 139 163-317 81-255 (355)
307 3sre_A PON1, serum paraoxonase 96.6 0.55 1.9E-05 46.1 23.3 183 102-293 51-286 (355)
308 2p9w_A MAL S 1 allergenic prot 96.5 0.37 1.3E-05 47.1 20.7 169 102-314 14-214 (334)
309 2p9w_A MAL S 1 allergenic prot 96.5 0.28 9.5E-06 48.0 19.7 157 189-386 16-210 (334)
310 3das_A Putative oxidoreductase 96.4 0.078 2.7E-06 52.1 15.5 72 221-293 24-103 (347)
311 2vpj_A Kelch-like protein 12; 96.0 0.75 2.6E-05 42.2 19.4 192 112-319 14-235 (301)
312 1cru_A Protein (soluble quinop 95.8 0.28 9.6E-06 49.5 16.9 73 221-293 19-100 (454)
313 2wg3_C Hedgehog-interacting pr 95.6 0.32 1.1E-05 49.4 16.1 75 220-294 5-93 (463)
314 3s25_A Hypothetical 7-bladed b 95.2 2.2 7.7E-05 40.4 24.1 224 11-265 23-262 (302)
315 3pbp_A Nucleoporin NUP82; beta 94.9 2.7 9.4E-05 42.5 20.2 142 206-384 39-205 (452)
316 3ei3_A DNA damage-binding prot 94.1 8.7 0.0003 43.3 24.3 145 106-256 837-997 (1158)
317 2xn4_A Kelch-like protein 2; s 94.0 3.6 0.00012 37.6 19.5 193 112-318 61-279 (302)
318 3s25_A Hypothetical 7-bladed b 93.7 4.7 0.00016 38.1 25.2 160 110-291 61-240 (302)
319 2g8s_A Glucose/sorbosone dehyd 93.1 6.4 0.00022 37.7 27.4 233 6-246 20-340 (353)
320 3ii7_A Kelch-like protein 7; p 93.0 5.4 0.00018 36.5 22.2 195 113-318 12-228 (306)
321 3ei3_A DNA damage-binding prot 92.6 16 0.00055 41.2 38.8 214 122-387 714-995 (1158)
322 3ii7_A Kelch-like protein 7; p 92.5 6.2 0.00021 36.1 19.8 195 112-318 55-275 (306)
323 2vpj_A Kelch-like protein 12; 92.0 7.1 0.00024 35.5 24.3 220 23-257 31-277 (301)
324 1zgk_A Kelch-like ECH-associat 91.9 6.8 0.00023 36.0 16.5 193 112-318 70-290 (308)
325 2xn4_A Kelch-like protein 2; s 91.2 8.7 0.0003 35.0 22.1 227 23-264 30-282 (302)
326 1tl2_A L10, protein (tachylect 90.7 1.5 5E-05 40.8 10.1 98 186-291 41-152 (236)
327 4gq2_M Nucleoporin NUP120; bet 90.1 1.3 4.3E-05 49.0 10.8 37 276-323 238-274 (950)
328 1tl2_A L10, protein (tachylect 89.7 0.52 1.8E-05 43.8 6.2 108 229-384 41-156 (236)
329 2wg3_C Hedgehog-interacting pr 88.7 11 0.00039 37.9 15.9 113 177-293 5-158 (463)
330 3sbq_A Nitrous-oxide reductase 88.2 2.5 8.5E-05 44.4 10.7 101 209-326 299-429 (638)
331 3pbp_A Nucleoporin NUP82; beta 88.2 13 0.00044 37.6 15.6 124 234-389 26-156 (452)
332 1zgk_A Kelch-like ECH-associat 87.8 16 0.00055 33.4 19.9 236 5-257 17-286 (308)
333 2be1_A Serine/threonine-protei 87.4 6.2 0.00021 38.3 12.5 110 115-227 12-140 (339)
334 1bpo_A Protein (clathrin); cla 83.6 41 0.0014 34.2 20.0 149 166-327 49-199 (494)
335 2xzh_A Clathrin heavy chain 1; 83.5 36 0.0012 33.4 18.5 150 165-327 49-200 (365)
336 3ott_A Two-component system se 82.8 49 0.0017 34.5 38.1 255 4-291 22-296 (758)
337 4gq2_M Nucleoporin NUP120; bet 82.7 3.8 0.00013 45.2 9.4 34 105-139 240-273 (950)
338 4hvt_A Ritya.17583.B, post-pro 82.1 56 0.0019 34.7 29.5 248 48-323 132-436 (711)
339 2uvk_A YJHT; unknown function, 81.2 21 0.00073 33.1 13.1 198 112-324 65-351 (357)
340 3zwu_A Alkaline phosphatase PH 80.9 3.9 0.00013 42.9 8.3 67 277-378 479-548 (592)
341 4a9v_A PHOX; hydrolase, beta-p 79.8 6.6 0.00023 41.1 9.5 71 276-379 478-549 (592)
342 2be1_A Serine/threonine-protei 79.7 4.2 0.00014 39.6 7.6 111 198-324 10-139 (339)
343 4asc_A Kelch repeat and BTB do 79.3 37 0.0013 30.9 21.6 190 115-319 7-225 (315)
344 4hvt_A Ritya.17583.B, post-pro 79.1 70 0.0024 33.9 19.3 193 106-317 134-383 (711)
345 3zwu_A Alkaline phosphatase PH 78.5 6.2 0.00021 41.3 8.9 59 230-292 477-549 (592)
346 3sbq_A Nitrous-oxide reductase 77.8 26 0.0009 36.7 13.1 125 189-322 326-484 (638)
347 3f7f_A Nucleoporin NUP120; nuc 77.4 2.7 9.1E-05 45.2 5.8 36 6-41 224-259 (729)
348 4fhn_B Nucleoporin NUP120; pro 74.9 2.3 8E-05 47.6 4.8 37 276-323 240-276 (1139)
349 2woz_A Kelch repeat and BTB do 71.0 62 0.0021 29.5 20.0 191 114-318 17-234 (318)
350 2zwa_A Leucine carboxyl methyl 69.1 1.1E+02 0.0039 31.8 21.9 201 111-319 396-639 (695)
351 3f7f_A Nucleoporin NUP120; nuc 66.2 5.6 0.00019 42.7 5.0 32 282-324 228-259 (729)
352 4a9v_A PHOX; hydrolase, beta-p 66.2 22 0.00074 37.3 9.3 62 228-293 475-550 (592)
353 4fhn_B Nucleoporin NUP120; pro 65.0 4.6 0.00016 45.3 4.3 29 13-41 249-277 (1139)
354 4asc_A Kelch repeat and BTB do 62.3 91 0.0031 28.2 23.2 215 23-247 13-251 (315)
355 3q6k_A 43.2 kDa salivary prote 62.0 1.2E+02 0.0042 29.6 21.9 208 99-380 85-343 (381)
356 3ott_A Two-component system se 61.5 1.5E+02 0.0053 30.6 39.7 307 5-384 104-442 (758)
357 2uvk_A YJHT; unknown function, 59.8 1.1E+02 0.0037 28.2 12.5 71 111-181 251-349 (357)
358 1sr4_A CDT A, cytolethal diste 58.7 99 0.0034 27.8 11.1 85 124-225 70-167 (206)
359 2woz_A Kelch repeat and BTB do 54.4 1.2E+02 0.0043 27.3 18.4 203 111-321 55-293 (318)
360 1bpo_A Protein (clathrin); cla 51.4 2.1E+02 0.0072 29.1 28.2 199 110-326 74-300 (494)
361 3b7f_A Glycosyl hydrolase, BNR 45.7 2E+02 0.0067 27.0 17.3 21 362-382 233-254 (394)
362 3q6k_A 43.2 kDa salivary prote 45.6 2.2E+02 0.0077 27.7 17.7 100 166-292 124-242 (381)
363 1xi4_A Clathrin heavy chain; a 42.4 1.6E+02 0.0053 34.5 11.8 120 199-327 78-199 (1630)
364 1xi4_A Clathrin heavy chain; a 38.9 5.4E+02 0.018 30.2 20.4 119 110-234 74-204 (1630)
365 3b7f_A Glycosyl hydrolase, BNR 37.8 2.6E+02 0.0088 26.2 17.5 21 229-249 55-77 (394)
366 2zwa_A Leucine carboxyl methyl 32.4 4.4E+02 0.015 27.3 21.3 180 112-293 451-674 (695)
367 1sr4_A CDT A, cytolethal diste 31.9 1.2E+02 0.0042 27.2 7.3 93 76-182 69-167 (206)
368 2xzh_A Clathrin heavy chain 1; 29.8 4E+02 0.014 26.0 32.2 197 106-326 72-301 (365)
369 3pg0_A Threefoil; symmetric de 27.3 2.6E+02 0.0088 22.9 10.5 106 206-324 25-139 (165)
370 3vsf_A Ricin B lectin; GH43 CB 23.5 5.5E+02 0.019 25.6 11.4 103 206-324 359-473 (526)
371 3mez_B Mannose-specific lectin 21.7 2.9E+02 0.0099 21.5 7.5 73 205-290 31-104 (113)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.7e-55 Score=457.30 Aligned_cols=356 Identities=10% Similarity=0.103 Sum_probs=288.5
Q ss_pred ccEEEEEee--ccEEEEEecCceEEEEecccce--eeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeee
Q 016446 4 TKVIEIVAA--RDIVFALAHSGVCAAFSRETNR--RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 79 (389)
Q Consensus 4 ~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~--~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~ 79 (389)
..|..+.|+ |++||+++.||+|||||..+++ ++.++.+|. ..|++|+|+|||+.|++++.+.... ..++
T Consensus 60 ~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~-~~v~~v~fs~dg~~l~~~~~~~~~~------~~v~ 132 (611)
T 1nr0_A 60 HQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFS-GPVKDISWDSESKRIAAVGEGRERF------GHVF 132 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSS-SCEEEEEECTTSCEEEEEECCSSCS------EEEE
T ss_pred CceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccC-CceEEEEECCCCCEEEEEECCCCce------eEEE
Confidence 568999999 9999999999999999986544 556788764 8999999999999999865322112 4566
Q ss_pred EeEeccCCCCCcceeEeeecccCceeEEEecCCCe-EEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceE
Q 016446 80 IEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGK-VLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIML 155 (389)
Q Consensus 80 l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~-~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~l 155 (389)
+|+ .|+.. ..+ ..+...+.+|+|+ |+++ +||+|+.|++|||||+.+++++.++. ...|++|+|| +|++|
T Consensus 133 ~wd--~~~~~--~~l--~gh~~~v~~v~f~-p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~l 205 (611)
T 1nr0_A 133 LFD--TGTSN--GNL--TGQARAMNSVDFK-PSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLF 205 (611)
T ss_dssp ETT--TCCBC--BCC--CCCSSCEEEEEEC-SSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred Eee--CCCCc--cee--cCCCCCceEEEEC-CCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEE
Confidence 676 45542 112 2355567889998 8887 69999999999999999999998886 4689999999 58888
Q ss_pred EEEecCCCCeeEEEEEcCCCeEEEEEe-------ecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEE------
Q 016446 156 LIFNRSSSHVPLKILSIEDGTVLKVFY-------HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELME------ 222 (389)
Q Consensus 156 a~~~~~s~d~tiklWd~~tG~~l~tl~-------~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~------ 222 (389)
|+++ .|++|||||+.+|+++.++. +|.+.+..|+|+ |++.+|++++.|++|||||++++++++
T Consensus 206 as~s---~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~s-pdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~ 281 (611)
T 1nr0_A 206 ASTG---GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWS-PDGTKIASASADKTIKIWNVATLKVEKTIPVGT 281 (611)
T ss_dssp EEEE---TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred EEEE---CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEEC-CCCCEEEEEeCCCeEEEEeCCCCceeeeecCCC
Confidence 8774 56899999999999999995 799999999998 788999999999999999999887654
Q ss_pred -------------------------------------EcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEE
Q 016446 223 -------------------------------------VSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTS 263 (389)
Q Consensus 223 -------------------------------------~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~t 263 (389)
++.+|...|++++|+|||++|+|++ |++|++||+. |++...
T Consensus 282 ~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 282 RIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRV 361 (611)
T ss_dssp SGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEC
T ss_pred CccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeee
Confidence 3458999999999999999999999 9999999996 777655
Q ss_pred e-ccCcCCc--------------------------------------------------C--------------------
Q 016446 264 F-EDHLLWH--------------------------------------------------P-------------------- 272 (389)
Q Consensus 264 l-~gh~~~~--------------------------------------------------~-------------------- 272 (389)
+ .+|...+ +
T Consensus 362 ~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~ 441 (611)
T 1nr0_A 362 FPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK 441 (611)
T ss_dssp SSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTE
T ss_pred cccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCc
Confidence 4 2332110 0
Q ss_pred ------CCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeE--EEEecCCCCCCCcccccCCCCCCCcc
Q 016446 273 ------DCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC--LAKINATNCSPKVDDELGSSSTGKSK 344 (389)
Q Consensus 273 ------~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~--l~tl~gH~~~~~~~~~~~~~~~~~~~ 344 (389)
...+.+++|||||++||+|+.| ++|||||+.++++ +.+ .+|+..+....+++++...++.
T Consensus 442 ~~~~~~~~~v~~va~spdg~~lasgs~D-----------~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~ 509 (611)
T 1nr0_A 442 LTEVPISYNSSCVALSNDKQFVAVGGQD-----------SKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVAT 509 (611)
T ss_dssp EEEEECSSCEEEEEECTTSCEEEEEETT-----------SEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEE
T ss_pred eeeeecCCCceEEEEeCCCCEEEEeCCC-----------CeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEE
Confidence 0125789999999999999875 9999999987764 345 7898777777788887766666
Q ss_pred ccccccceeccc-----------ccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 345 KLNKSSYIRSTV-----------GEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 345 ~~~~~~~~~~~~-----------~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
..+++.++|+.. ++|...|++|+|||||++|||||.|++||||+.
T Consensus 510 s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~ 565 (611)
T 1nr0_A 510 DQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNM 565 (611)
T ss_dssp ETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred cCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEEC
Confidence 666665555432 337889999999999999999999999999984
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.3e-54 Score=452.73 Aligned_cols=348 Identities=9% Similarity=0.018 Sum_probs=281.6
Q ss_pred cccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 3 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
|..+..+.|+ |++||+++ +++|+||++++++.++++.+|. +.|.+++|||||++||+ ++.| .+++|
T Consensus 18 ~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~-~~v~~~~~spdg~~las----g~~d------~~v~l 85 (611)
T 1nr0_A 18 RGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHS-HQTTVAKTSPSGYYCAS----GDVH------GNVRI 85 (611)
T ss_dssp TTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCS-SCEEEEEECTTSSEEEE----EETT------SEEEE
T ss_pred cCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCC-CceEEEEECCCCcEEEE----EeCC------CCEEE
Confidence 5667778888 88999988 5799999998899999999975 89999999999999999 4577 89999
Q ss_pred eEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCC----CeEEEEeCCCCeEEEEec--CCcEEEEEEcC-Cc
Q 016446 81 EYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD----SIYKVFDLKNYTMLYSIS--DKHVQEIKISP-GI 153 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D----~tiklWdl~~g~~l~tl~--~~~V~~vafS~-g~ 153 (389)
||+.+++...... + ..+.+.+.+|+|+ |||++||+++.| ++|++|| +++++.++. ...|++|+|+| +.
T Consensus 86 Wd~~~~~~~~~~~-~-~~~~~~v~~v~fs-~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~ 160 (611)
T 1nr0_A 86 WDTTQTTHILKTT-I-PVFSGPVKDISWD-SESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRP 160 (611)
T ss_dssp EESSSTTCCEEEE-E-ECSSSCEEEEEEC-TTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSS
T ss_pred eECCCCcceeeEe-e-cccCCceEEEEEC-CCCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCceEEEECCCCC
Confidence 9987665411111 1 2355678899998 999999998876 4899998 566665554 56899999996 44
Q ss_pred -eEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcc-------
Q 016446 154 -MLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR------- 225 (389)
Q Consensus 154 -~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~------- 225 (389)
+||++ +.|++|||||..+++++++|.+|...|.+|+|+ |++..|++++.|++|+|||+.+|+++.++.
T Consensus 161 ~~l~s~---s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fs-pdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~ 236 (611)
T 1nr0_A 161 FRIISG---SDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYN-PDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNV 236 (611)
T ss_dssp CEEEEE---ETTSCEEEEETTTBEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSC
T ss_pred eEEEEE---eCCCeEEEEECCCCeEeeeeccccCceEEEEEC-CCCCEEEEEECCCcEEEEECCCCcEeeeecccccccc
Confidence 57776 456899999999999999999999999999998 788999999999999999999999999984
Q ss_pred cCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEe---------------------------------------
Q 016446 226 TEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSF--------------------------------------- 264 (389)
Q Consensus 226 gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl--------------------------------------- 264 (389)
+|...|++++|+|||++|||++ |++|||||++ ++++.++
T Consensus 237 ~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~ 316 (611)
T 1nr0_A 237 AHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSI 316 (611)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEE
T ss_pred ccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCc
Confidence 8999999999999999999999 9999999996 8766544
Q ss_pred ----ccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEe-cCCCCCCCcccccCCCC
Q 016446 265 ----EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI-NATNCSPKVDDELGSSS 339 (389)
Q Consensus 265 ----~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl-~gH~~~~~~~~~~~~~~ 339 (389)
.+|... |++++|||||++|||++.| ++||+||+.+|+++..+ .+|...+....++ +++
T Consensus 317 ~~~~~gh~~~-----v~~l~~spdg~~l~s~s~D-----------~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s-~~~ 379 (611)
T 1nr0_A 317 DQVRYGHNKA-----ITALSSSADGKTLFSADAE-----------GHINSWDISTGISNRVFPDVHATMITGIKTT-SKG 379 (611)
T ss_dssp EEEECCCSSC-----EEEEEECTTSSEEEEEETT-----------SCEEEEETTTCCEEECSSCSCSSCEEEEEEC-TTS
T ss_pred ceEEcCCCCC-----EEEEEEeCCCCEEEEEeCC-----------CcEEEEECCCCceeeecccCCcceEEEEEEC-CCC
Confidence 467665 8999999999999999875 99999999999998877 5676543332222 222
Q ss_pred CCCccccccccceecccc------------------------------------------------cccCCEEEEEECCC
Q 016446 340 TGKSKKLNKSSYIRSTVG------------------------------------------------EALEDITSLFYDEE 371 (389)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~V~svafSpd 371 (389)
...+...+++.++|+... .+...|++++||||
T Consensus 380 ~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spd 459 (611)
T 1nr0_A 380 DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSND 459 (611)
T ss_dssp CEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTT
T ss_pred cEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCC
Confidence 333333333333332111 12346899999999
Q ss_pred CCEEEEecCCCcEEEcc
Q 016446 372 RNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 372 g~~LaSgs~D~tIrlW~ 388 (389)
|++||+|+.|++|||||
T Consensus 460 g~~lasgs~D~~v~lwd 476 (611)
T 1nr0_A 460 KQFVAVGGQDSKVHVYK 476 (611)
T ss_dssp SCEEEEEETTSEEEEEE
T ss_pred CCEEEEeCCCCeEEEEE
Confidence 99999999999999997
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2e-53 Score=434.45 Aligned_cols=310 Identities=13% Similarity=0.241 Sum_probs=276.5
Q ss_pred cccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 3 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
...|..|.|+ ++.|++++.|+++++|+. ++++++++.+|. ..|++++|+|||+.|+++ +.| ..+++
T Consensus 262 ~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~-~~v~~~~~~~~~~~l~t~----~~d------~~i~~ 329 (577)
T 2ymu_A 262 SSSVNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS-SSVWGVAFSPDGQTIASA----SDD------KTVKL 329 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCS-SCEEEEEECTTSSEEEEE----ETT------SCEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCC-CCeEEEEECCCCCEEEEE----eCC------CeEEE
Confidence 3568889998 889999999999999998 599999999875 899999999999999994 467 78889
Q ss_pred eEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceEEE
Q 016446 81 EYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIMLLI 157 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~la~ 157 (389)
|++...++ ..+ ..+...+.+++|+ |||++||+++.|++|++||. +++++.++. ...|.+++|| +|++||+
T Consensus 330 w~~~~~~~---~~~--~~~~~~v~~~~~s-~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~ 402 (577)
T 2ymu_A 330 WNRNGQHL---QTL--TGHSSSVWGVAFS-PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIAS 402 (577)
T ss_dssp EETTSCEE---EEE--CCCSSCEEEEEEC-TTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred EeCCCCee---EEE--eCCCCCEEEEEEC-CCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEE
Confidence 99644332 112 2344456789998 99999999999999999995 788887775 5689999999 6888988
Q ss_pred EecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEc
Q 016446 158 FNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFL 237 (389)
Q Consensus 158 ~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fs 237 (389)
++ .|++|++|| .+|++++++.+|...+..++|+ |++..+++++.|++|++||+ ++++++.+.+|...|.+++|+
T Consensus 403 ~~---~d~~v~~~~-~~~~~~~~~~~~~~~v~~~~~s-~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s 476 (577)
T 2ymu_A 403 AS---DDKTVKLWN-RNGQLLQTLTGHSSSVWGVAFS-PDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFS 476 (577)
T ss_dssp EE---TTSEEEEEC-TTCCEEEEEECCSSCEEEEEEC-TTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEEC
T ss_pred Ee---CCCEEEEEe-CCCCEEEEecCCCCCeEEEEEC-CCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEc
Confidence 74 458999999 5789999999999999999998 78899999999999999996 788999999999999999999
Q ss_pred CCCcEEEEEc-CCeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCC
Q 016446 238 YENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTG 316 (389)
Q Consensus 238 pdg~~laS~s-D~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg 316 (389)
|||++||+++ |++|+|||.+|++++++.+|... |.+|+|||||++||+++.| ++||||| .+|
T Consensus 477 pd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~-----v~~l~~s~dg~~l~s~~~d-----------g~v~lwd-~~~ 539 (577)
T 2ymu_A 477 PDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSS-----VRGVAFSPDGQTIASASDD-----------KTVKLWN-RNG 539 (577)
T ss_dssp TTSCEEEEEETTSEEEEEETTSCEEEEEECCSSC-----EEEEEECTTSSCEEEEETT-----------SEEEEEC-TTS
T ss_pred CCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCC-----EEEEEEcCCCCEEEEEECc-----------CEEEEEe-CCC
Confidence 9999999998 99999999999999999999887 8999999999999999865 9999999 579
Q ss_pred eEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEcc
Q 016446 317 KCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 317 ~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
++++++.+|+ ..|++|+|+|||++|+||+.|++|++||
T Consensus 540 ~~~~~~~~h~----------------------------------~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 540 QLLQTLTGHS----------------------------------SSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp CEEEEEECCS----------------------------------SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CEEEEEcCCC----------------------------------CCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 9999999998 5999999999999999999999999997
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.8e-53 Score=409.80 Aligned_cols=288 Identities=15% Similarity=0.185 Sum_probs=256.4
Q ss_pred ceeeeeeecCCcceEEEEEEeeC----CCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe-eecccCceeEE
Q 016446 33 NRRICFLNVSPDEVIRSLFYNKN----NDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFVE 107 (389)
Q Consensus 33 g~~l~tl~~~~~~~v~sv~~spd----g~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~~~~~~~v~ 107 (389)
|.+++.+++|. +.|++|+|+|+ +++||+ ++.| .+++||++..+++. ..+. ..+...+.+++
T Consensus 22 g~~~~~~~~H~-~~V~~v~~~~~~~~~~~~l~t----gs~D------~~v~vW~~~~~~~~---~~~~l~gh~~~v~~~~ 87 (321)
T 3ow8_A 22 GILFKQEQAHD-DAIWSVAWGTNKKENSETVVT----GSLD------DLVKVWKWRDERLD---LQWSLEGHQLGVVSVD 87 (321)
T ss_dssp EEEEEETTSSS-SCEEEEEEC-------CEEEE----EETT------SCEEEEEEETTEEE---EEEEECCCSSCEEEEE
T ss_pred hheeeecccCC-CcEEEEEEecCCCCCCCEEEE----EcCC------CCEEEEECCCCCee---eeeeeccCCCCEEEEE
Confidence 66777778764 99999999985 668999 5577 88999998776541 1222 24555677899
Q ss_pred EecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeec
Q 016446 108 FDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHL 184 (389)
Q Consensus 108 Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~ 184 (389)
|+ |++++||+++.|++|||||+.+++++.++. ...|++++|+ +|++||++ +.|++|++||+++++++.++..|
T Consensus 88 ~~-~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g---~~dg~v~i~~~~~~~~~~~~~~~ 163 (321)
T 3ow8_A 88 IS-HTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATG---THVGKVNIFGVESGKKEYSLDTR 163 (321)
T ss_dssp EC-SSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEE---CTTSEEEEEETTTCSEEEEEECS
T ss_pred EC-CCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEE---cCCCcEEEEEcCCCceeEEecCC
Confidence 98 899999999999999999999999998886 3578999999 58888876 45689999999999999999999
Q ss_pred CCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEE
Q 016446 185 LHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVT 262 (389)
Q Consensus 185 ~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~ 262 (389)
...+..++|+ |++.+|++++.|++|+|||++++++++++++|...|.+++|+|||++|++++ |++|+|||++ ++++.
T Consensus 164 ~~~v~~~~~s-pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~ 242 (321)
T 3ow8_A 164 GKFILSIAYS-PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 242 (321)
T ss_dssp SSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEE
T ss_pred CceEEEEEEC-CCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeE
Confidence 8999999998 7889999999999999999999999999999999999999999999999999 9999999997 99999
Q ss_pred EeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCC
Q 016446 263 SFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGK 342 (389)
Q Consensus 263 tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~ 342 (389)
++.+|..+ |.+++|+|||++|||++.| ++|||||+.+++|++++.+|+
T Consensus 243 ~~~~h~~~-----v~~~~~sp~~~~l~s~s~D-----------~~v~iwd~~~~~~~~~~~~h~---------------- 290 (321)
T 3ow8_A 243 TLSGHASW-----VLNVAFCPDDTHFVSSSSD-----------KSVKVWDVGTRTCVHTFFDHQ---------------- 290 (321)
T ss_dssp EECCCSSC-----EEEEEECTTSSEEEEEETT-----------SCEEEEETTTTEEEEEECCCS----------------
T ss_pred EEcCCCCc-----eEEEEECCCCCEEEEEeCC-----------CcEEEEeCCCCEEEEEEcCCC----------------
Confidence 99999987 8999999999999999875 999999999999999999998
Q ss_pred ccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 343 SKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
..|++|+|+|||+.|+||+.|++|+|||.
T Consensus 291 ------------------~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 291 ------------------DQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp ------------------SCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred ------------------CcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 58999999999999999999999999984
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-52 Score=418.60 Aligned_cols=294 Identities=16% Similarity=0.256 Sum_probs=261.5
Q ss_pred EEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCce
Q 016446 25 CAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPG 104 (389)
Q Consensus 25 iklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~ 104 (389)
.+.|... .....++.+|. ..|++++|+|+++.|+++ +.| ..++|||+.+|++. . .+ ..+...+.
T Consensus 91 ~~~~~~~-~~~~~~l~gh~-~~V~~~~~~p~~~~l~s~----s~D------g~i~vwd~~~~~~~--~-~l-~~h~~~V~ 154 (410)
T 1vyh_C 91 PKEWIPR-PPEKYALSGHR-SPVTRVIFHPVFSVMVSA----SED------ATIKVWDYETGDFE--R-TL-KGHTDSVQ 154 (410)
T ss_dssp -CCCCCC-SSCSCEEECCS-SCEEEEEECSSSSEEEEE----ESS------SCEEEEETTTCCCC--E-EE-CCCSSCEE
T ss_pred ccccccC-CCceEeecccC-CcEEEEEEcCCCCEEEEE----eCC------CeEEEEECCCCcEE--E-EE-eccCCcEE
Confidence 3445442 44566788875 899999999999999994 577 88999999999862 1 22 23556678
Q ss_pred eEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEE
Q 016446 105 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVF 181 (389)
Q Consensus 105 ~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl 181 (389)
+++|+ |+|++||+|+.|++|||||+.+++++.++. ...|.+++|+ +|.+|++++ .|++|++||+++|++++++
T Consensus 155 ~v~~~-~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s---~D~~i~~wd~~~~~~~~~~ 230 (410)
T 1vyh_C 155 DISFD-HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS---RDKTIKMWEVQTGYCVKTF 230 (410)
T ss_dssp EEEEC-TTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEE---TTSEEEEEETTTCCEEEEE
T ss_pred EEEEc-CCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEe---CCCeEEEEECCCCcEEEEE
Confidence 89998 899999999999999999999999998886 4689999999 578888764 5689999999999999999
Q ss_pred eecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCC--------------------Cc
Q 016446 182 YHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYE--------------------NQ 241 (389)
Q Consensus 182 ~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspd--------------------g~ 241 (389)
.+|...+..+.|+ |++..+++++.|++|++||+.++++...+.+|...|.+++|+|+ |+
T Consensus 231 ~~h~~~v~~~~~~-~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 309 (410)
T 1vyh_C 231 TGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGP 309 (410)
T ss_dssp ECCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CC
T ss_pred eCCCccEEEEEEC-CCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCC
Confidence 9999999999997 77889999999999999999999999999999999999999997 77
Q ss_pred EEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEE
Q 016446 242 LFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCL 319 (389)
Q Consensus 242 ~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l 319 (389)
+|++++ |++|++||+. |+++.++.+|..+ |.+++|+|+|++|+||+.| ++|||||+.+++++
T Consensus 310 ~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~-----v~~v~~~~~g~~l~s~s~D-----------~~i~vwd~~~~~~~ 373 (410)
T 1vyh_C 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-----VRGVLFHSGGKFILSCADD-----------KTLRVWDYKNKRCM 373 (410)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSC-----EEEEEECSSSSCEEEEETT-----------TEEEEECCTTSCCC
T ss_pred EEEEEeCCCeEEEEECCCCceEEEEECCCCc-----EEEEEEcCCCCEEEEEeCC-----------CeEEEEECCCCceE
Confidence 899999 9999999997 9999999999987 8999999999999999875 99999999999999
Q ss_pred EEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 320 AKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 320 ~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
.++.+|. ..|++|+|+|++++|||||.|++||+|+.
T Consensus 374 ~~~~~h~----------------------------------~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 374 KTLNAHE----------------------------------HFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEEECCS----------------------------------SCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEEcCCC----------------------------------CcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 9999998 58999999999999999999999999984
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=8e-52 Score=401.30 Aligned_cols=288 Identities=12% Similarity=0.177 Sum_probs=252.2
Q ss_pred ceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCC
Q 016446 33 NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVN 112 (389)
Q Consensus 33 g~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pd 112 (389)
.++.++|.+|. +.|++++|+|||+.|+++ +.| ..++|||+.+++... .+ ..+...+..++|+ |+
T Consensus 45 ~~~~~~l~gH~-~~v~~~~~s~d~~~l~s~----s~D------g~v~iWd~~~~~~~~--~~--~~~~~~v~~~~~s-~~ 108 (340)
T 1got_B 45 MRTRRTLRGHL-AKIYAMHWGTDSRLLLSA----SQD------GKLIIWDSYTTNKVH--AI--PLRSSWVMTCAYA-PS 108 (340)
T ss_dssp CCEEEEECCCS-SCEEEEEECTTSSEEEEE----ETT------TEEEEEETTTCCEEE--EE--ECSSSCEEEEEEC-TT
T ss_pred chhheeecCCC-CceEEEEECCCCCEEEEE----eCC------CcEEEEECCCCCcce--Ee--ecCCccEEEEEEC-CC
Confidence 56778899875 899999999999999994 577 899999998887521 11 2344567789998 89
Q ss_pred CeEEEEecCCCeEEEEeCCCCe----EEEEec--CCcEEEEEEcCCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCC
Q 016446 113 GKVLTYSAQDSIYKVFDLKNYT----MLYSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLH 186 (389)
Q Consensus 113 G~~Las~s~D~tiklWdl~~g~----~l~tl~--~~~V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~ 186 (389)
|++||+|+.|++|++||+.+++ +...+. ...|.+++|+|+..+++++ .|++|++||+++|+++.++.+|.+
T Consensus 109 ~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s---~d~~i~~wd~~~~~~~~~~~~h~~ 185 (340)
T 1got_B 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSS---GDTTCALWDIETGQQTTTFTGHTG 185 (340)
T ss_dssp SSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEE---TTSCEEEEETTTTEEEEEECCCSS
T ss_pred CCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEE---CCCcEEEEECCCCcEEEEEcCCCC
Confidence 9999999999999999998753 444553 5689999999766677764 458999999999999999999999
Q ss_pred ceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEe
Q 016446 187 RNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSF 264 (389)
Q Consensus 187 ~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl 264 (389)
.+..++|+ |++..+++++.|++|+|||++++++++++.+|...|.+++|+|+|++|++++ |++|+|||+. ++++.++
T Consensus 186 ~v~~~~~~-~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 264 (340)
T 1got_B 186 DVMSLSLA-PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY 264 (340)
T ss_dssp CEEEEEEC-TTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ceEEEEEC-CCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 99999998 6788999999999999999999999999999999999999999999999999 9999999997 8888887
Q ss_pred ccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCcc
Q 016446 265 EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSK 344 (389)
Q Consensus 265 ~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~ 344 (389)
..+... +.|.+++|+|||++|++|+.| ++|+|||+.+++++.++.+|.
T Consensus 265 ~~~~~~---~~v~~~~~s~~g~~l~~g~~d-----------~~i~vwd~~~~~~~~~~~~h~------------------ 312 (340)
T 1got_B 265 SHDNII---CGITSVSFSKSGRLLLAGYDD-----------FNCNVWDALKADRAGVLAGHD------------------ 312 (340)
T ss_dssp CCTTCC---SCEEEEEECTTSSEEEEEETT-----------SEEEEEETTTCCEEEEEECCS------------------
T ss_pred ccCCcc---cceEEEEECCCCCEEEEECCC-----------CeEEEEEcccCcEeeEeecCC------------------
Confidence 633221 238999999999999999875 999999999999999999998
Q ss_pred ccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEcc
Q 016446 345 KLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
..|++|+|+|||+.|||||.|++|||||
T Consensus 313 ----------------~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 313 ----------------NRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ----------------SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ----------------CcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 5999999999999999999999999997
No 7
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.1e-51 Score=417.28 Aligned_cols=310 Identities=14% Similarity=0.253 Sum_probs=275.1
Q ss_pred cccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 3 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
...|..+.|+ +++|++++.|++|++|+. +++++.++.+|. ..|.+++|+|||+.|+++ +.| ..+++
T Consensus 221 ~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~-~~v~~v~~~~d~~~l~~~----~~d------~~i~~ 288 (577)
T 2ymu_A 221 SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS-SSVNGVAFRPDGQTIASA----SDD------KTVKL 288 (577)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCS-SCEEEEEECTTSSEEEEE----ETT------SCEEE
T ss_pred CCCEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCC-CCEEEEEEcCCCCEEEEE----eCC------CEEEE
Confidence 3568899998 889999999999999998 599999999875 899999999999999994 467 77888
Q ss_pred eEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceEEE
Q 016446 81 EYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIMLLI 157 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~la~ 157 (389)
|+ ..+++. ..+ ..+...+.+++|+ |||++|++++.|++||+||+. ++.+.++. ...|.+++|+ +|.+||+
T Consensus 289 w~-~~~~~~--~~~--~~h~~~v~~~~~~-~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 361 (577)
T 2ymu_A 289 WN-RNGQLL--QTL--TGHSSSVWGVAFS-PDGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSPDGQTIAS 361 (577)
T ss_dssp EE-TTSCEE--EEE--CCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred Ee-CCCcEE--EEE--ecCCCCeEEEEEC-CCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECCCCCEEEE
Confidence 98 445531 111 2355567789998 999999999999999999974 55555554 5789999999 5888887
Q ss_pred EecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEc
Q 016446 158 FNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFL 237 (389)
Q Consensus 158 ~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fs 237 (389)
++ .|++|++|| .+|+++.++.+|...+..++|+ |++..|++++.|++|+|||. ++++++++.+|...|++++|+
T Consensus 362 ~~---~dg~v~~~~-~~~~~~~~~~~~~~~v~~~~~s-~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s 435 (577)
T 2ymu_A 362 AS---DDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFS-PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFS 435 (577)
T ss_dssp EE---TTSEEEEEE-TTCCEEEEEECCSSCEEEEEEC-TTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEEC
T ss_pred Ee---CCCEEEEEc-CCCCEEEEecCCCCCeEEEEEC-CCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEEC
Confidence 74 458999999 5789999999999999999998 78899999999999999995 789999999999999999999
Q ss_pred CCCcEEEEEc-CCeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCC
Q 016446 238 YENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTG 316 (389)
Q Consensus 238 pdg~~laS~s-D~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg 316 (389)
||+++|++++ |++|++||.+++++.++.+|... |.+++|||||++||+++.| ++||||| .+|
T Consensus 436 ~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~-----v~~~~~spd~~~las~~~d-----------~~i~iw~-~~~ 498 (577)
T 2ymu_A 436 PDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSS-----VRGVAFSPDGQTIASASDD-----------KTVKLWN-RNG 498 (577)
T ss_dssp TTSSEEEEEETTSEEEEEETTSCEEEEEECCSSC-----EEEEEECTTSCEEEEEETT-----------SEEEEEE-TTS
T ss_pred CCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCC-----EEEEEEcCCCCEEEEEeCC-----------CEEEEEc-CCC
Confidence 9999999998 99999999999999999999886 8999999999999999875 9999999 579
Q ss_pred eEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEcc
Q 016446 317 KCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 317 ~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
++++++.+|+ ..|++|+|||||++||+|+.|++|||||
T Consensus 499 ~~~~~~~~h~----------------------------------~~v~~l~~s~dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 499 QLLQTLTGHS----------------------------------SSVRGVAFSPDGQTIASASDDKTVKLWN 536 (577)
T ss_dssp CEEEEEECCS----------------------------------SCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CEEEEEeCCC----------------------------------CCEEEEEEcCCCCEEEEEECcCEEEEEe
Confidence 9999999998 5899999999999999999999999998
No 8
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.1e-50 Score=395.14 Aligned_cols=289 Identities=11% Similarity=0.173 Sum_probs=250.9
Q ss_pred ceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCC
Q 016446 33 NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVN 112 (389)
Q Consensus 33 g~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pd 112 (389)
.++.++|.+|. +.|++++|+|||+.||+ ++.| ..++|||+.+++... .+ ..+..++.+++|+ |+
T Consensus 54 ~~~~~~l~gH~-~~V~~~~~s~d~~~l~s----~s~D------g~v~vWd~~~~~~~~---~~-~~~~~~v~~~~~s-p~ 117 (354)
T 2pbi_B 54 MKTRRTLKGHG-NKVLCMDWCKDKRRIVS----SSQD------GKVIVWDSFTTNKEH---AV-TMPCTWVMACAYA-PS 117 (354)
T ss_dssp CCEEEEEECCS-SCEEEEEECTTSSEEEE----EETT------SEEEEEETTTCCEEE---EE-ECSSSCCCEEEEC-TT
T ss_pred cEEEEEecCCC-CeEEEEEECCCCCEEEE----EeCC------CeEEEEECCCCCcce---EE-ecCCCCEEEEEEC-CC
Confidence 45678899975 89999999999999999 4577 899999988887521 11 2344567889998 99
Q ss_pred CeEEEEecCCCeEEEEeCCCC------e--EEEEecCCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEee
Q 016446 113 GKVLTYSAQDSIYKVFDLKNY------T--MLYSISDKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH 183 (389)
Q Consensus 113 G~~Las~s~D~tiklWdl~~g------~--~l~tl~~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~ 183 (389)
|++||+|+.|+++++|++... . .....|...|.+++|+ ++..|++++ .|++|+|||+++|++++++.+
T Consensus 118 g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s---~D~~v~lwd~~~~~~~~~~~~ 194 (354)
T 2pbi_B 118 GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTAS---GDGTCALWDVESGQLLQSFHG 194 (354)
T ss_dssp SSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEE---TTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEe---CCCcEEEEeCCCCeEEEEEcC
Confidence 999999999999999998643 1 2234467899999999 577888764 458999999999999999999
Q ss_pred cCCceeEEEEEec-CCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcE
Q 016446 184 LLHRNKKVDFIEQ-FNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GEL 260 (389)
Q Consensus 184 ~~~~~~~v~f~~~-~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~ 260 (389)
|...+..++|++. ++..+++++.|++|++||++++++++++.+|...|.+++|+|+|++||+++ |++|||||+. +++
T Consensus 195 h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~ 274 (354)
T 2pbi_B 195 HGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADRE 274 (354)
T ss_dssp CSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 9999999999743 357888999999999999999999999999999999999999999999999 9999999997 778
Q ss_pred EEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCC
Q 016446 261 VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSST 340 (389)
Q Consensus 261 l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~ 340 (389)
+..+..+... ..+.+++|+|||++|++|+.| ++|+|||+.+|+++.++.+|.
T Consensus 275 ~~~~~~~~~~---~~~~~~~~s~~g~~l~~g~~d-----------~~i~vwd~~~~~~~~~l~~h~-------------- 326 (354)
T 2pbi_B 275 VAIYSKESII---FGASSVDFSLSGRLLFAGYND-----------YTINVWDVLKGSRVSILFGHE-------------- 326 (354)
T ss_dssp EEEECCTTCC---SCEEEEEECTTSSEEEEEETT-----------SCEEEEETTTCSEEEEECCCS--------------
T ss_pred EEEEcCCCcc---cceeEEEEeCCCCEEEEEECC-----------CcEEEEECCCCceEEEEECCC--------------
Confidence 8877755432 137899999999999999865 899999999999999999998
Q ss_pred CCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEcc
Q 016446 341 GKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
..|++|+|||||++|||||.|++|+||+
T Consensus 327 --------------------~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 327 --------------------NRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp --------------------SCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred --------------------CcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 5999999999999999999999999996
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-51 Score=404.65 Aligned_cols=307 Identities=12% Similarity=0.117 Sum_probs=229.3
Q ss_pred EEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecC--CCcceeeeeeeEeEeccCCCCCcc
Q 016446 15 IVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASD--NFSSLKCRSTKIEYIRRGKPDSGF 92 (389)
Q Consensus 15 ~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~--d~~~l~~~~~~l~~i~~g~~~~~~ 92 (389)
.++....+...+.|++....+ .. |...|++|+|||||++||++|.+... | ..+++|+..+|......
T Consensus 18 ~~~~~~g~~~~~~w~~p~~~p----~~-H~~~V~~v~fSpDG~~las~s~d~~~~wd------~~v~~~~~~~~~~~~~~ 86 (357)
T 4g56_B 18 LYFQSNGSSKGSAWGRPVTAP----AC-MEVQIGAVRYRRDGALLLAASSLSSRTWG------GSIWVFKDPEGAPNESL 86 (357)
T ss_dssp --------------------------C-CCSEEEEEEECSSSCEEEEEECSSSSSCC------EEEEEESSCC---CGGG
T ss_pred eEEecCCCccccccCCCCCCc----cc-ccCCEEEEEECCCCCEEEEEcCCCCcccc------CeEEEEECCCCCcceeE
Confidence 345556677788998764433 23 45899999999999999997643221 3 46778888777763322
Q ss_pred eeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEE----e--cCCcEEEEEEc-CCceEEEEecCCCCe
Q 016446 93 ALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS----I--SDKHVQEIKIS-PGIMLLIFNRSSSHV 165 (389)
Q Consensus 93 ~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~t----l--~~~~V~~vafS-~g~~la~~~~~s~d~ 165 (389)
.....++...+.+++|+ ||+++|+ ++.|++|||||+.+++++.. . |...|.+|+|+ +|.+||+++ .|+
T Consensus 87 ~~~~~~~~~~V~~~~~s-~d~~~l~-~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs---~dg 161 (357)
T 4g56_B 87 CTAGVQTEAGVTDVAWV-SEKGILV-ASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG---KDF 161 (357)
T ss_dssp CSEEEECSSCEEEEEEE-TTTEEEE-EETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE---TTS
T ss_pred ecccCCCCCCEEEEEEc-CCCCEEE-EECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe---CCC
Confidence 22223455567889998 8887665 67899999999999886532 2 34689999999 588888774 458
Q ss_pred eEEEEEcCCCeEEEEEeecCCceeEEEEEecCC-CeEEEEeCCCcEEEEECCCCeEEEEc--ccCCCceEEEEEcCC-Cc
Q 016446 166 PLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFN-EKLLVKQENENLQILDVRNAELMEVS--RTEFMTPSAFIFLYE-NQ 241 (389)
Q Consensus 166 tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~-~~l~~~s~D~tIklWd~~tg~~~~~l--~gh~~~v~sv~fspd-g~ 241 (389)
+|+|||+++|+++.+|++|...+..|+|+ +++ ..+++++.|++|+|||+++++++..+ ..|...+.+++|+|+ ++
T Consensus 162 ~v~iwd~~~~~~~~~~~~h~~~v~~v~~s-~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~ 240 (357)
T 4g56_B 162 SVKVWDLSQKAVLKSYNAHSSEVNCVAAC-PGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDD 240 (357)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEC-TTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTT
T ss_pred eEEEEECCCCcEEEEEcCCCCCEEEEEEc-cCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccc
Confidence 99999999999999999999999999998 555 57788999999999999999987765 457778999999997 57
Q ss_pred EEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCC-CEEEEEecCCCcccccCCCCCeEEEEeCCCCeE
Q 016446 242 LFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQ-DLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 318 (389)
Q Consensus 242 ~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG-~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~ 318 (389)
+||+++ |++|+|||+. +++++++.+|... |++++||||| ++|||||.| ++|||||+++|++
T Consensus 241 ~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~-----v~~l~~sp~~~~~lasgs~D-----------~~i~iwd~~~~~~ 304 (357)
T 4g56_B 241 TFACGDETGNVSLVNIKNPDSAQTSAVHSQN-----ITGLAYSYHSSPFLASISED-----------CTVAVLDADFSEV 304 (357)
T ss_dssp EEEEEESSSCEEEEESSCGGGCEEECCCSSC-----EEEEEECSSSSCCEEEEETT-----------SCEEEECTTSCEE
T ss_pred eEEEeecccceeEEECCCCcEeEEEecccee-----EEEEEEcCCCCCEEEEEeCC-----------CEEEEEECCCCcE
Confidence 899998 9999999996 9999999999887 8999999998 689998865 9999999999999
Q ss_pred EEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECC-CCCEEEEecCCCcEEEccC
Q 016446 319 LAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDE-ERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 319 l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSp-dg~~LaSgs~D~tIrlW~~ 389 (389)
++.+ +|+ ..|++|+||| |+++|||||.|++|++|+.
T Consensus 305 ~~~~-~H~----------------------------------~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 305 FRDL-SHR----------------------------------DFVTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp EEEC-CCS----------------------------------SCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred eEEC-CCC----------------------------------CCEEEEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 8776 798 5899999999 8999999999999999984
No 10
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=8.1e-52 Score=407.76 Aligned_cols=304 Identities=13% Similarity=0.161 Sum_probs=258.7
Q ss_pred CceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeeccc
Q 016446 22 SGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLK 101 (389)
Q Consensus 22 ~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~ 101 (389)
+.++..|+..+.++.++|.+|. +.|++|+|+|+|+.|++ ++.| .+++|||+.+++.. ..+ ..+..
T Consensus 45 ~~~~~~~~~~~~~~~~~l~gH~-~~V~~~~~sp~~~~l~s----~s~D------~~v~iWd~~~~~~~--~~~--~~h~~ 109 (380)
T 3iz6_a 45 GRTAVSFNPTDLVCCRTLQGHS-GKVYSLDWTPEKNWIVS----ASQD------GRLIVWNALTSQKT--HAI--KLHCP 109 (380)
T ss_dssp GGGCCCCCCCCCEEEEEECCCS-SCEEEEEECTTSSCEEE----EETT------SEEEEEETTTTEEE--EEE--ECCCT
T ss_pred cccccccccceeEEeecccccc-cEEEEEEEcCCCCEEEE----EeCC------CeEEEEECCCCccc--eEE--ecCCC
Confidence 4556678888889999999975 89999999999999999 4577 89999999888651 111 23555
Q ss_pred CceeEEEecCCCeEEEEecCCCeEEEEeCCCCe-------EEEEe--cCCcEEEEEEcC--CceEEEEecCCCCeeEEEE
Q 016446 102 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-------MLYSI--SDKHVQEIKISP--GIMLLIFNRSSSHVPLKIL 170 (389)
Q Consensus 102 ~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~-------~l~tl--~~~~V~~vafS~--g~~la~~~~~s~d~tiklW 170 (389)
.+.+++|+ |||++||+|+.|++|++||+.+.. +...+ |...|.+++|+| +.+|+++ +.|++|++|
T Consensus 110 ~v~~~~~s-~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~---s~D~~i~~w 185 (380)
T 3iz6_a 110 WVMECAFA-PNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITG---SGDQTCVLW 185 (380)
T ss_dssp TCCCCEEC-TTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEE---CTTSCEEEE
T ss_pred CEEEEEEC-CCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEE---CCCCcEEEE
Confidence 67889998 999999999999999999986532 22333 456899999995 4568776 556899999
Q ss_pred EcCCCeEEEEE-----eecCCceeEEEEEecCCCeEEEEeCCCcEEEEECC-CCeEEEEcccCCCceEEEEEcCCCcEEE
Q 016446 171 SIEDGTVLKVF-----YHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVR-NAELMEVSRTEFMTPSAFIFLYENQLFL 244 (389)
Q Consensus 171 d~~tG~~l~tl-----~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~-tg~~~~~l~gh~~~v~sv~fspdg~~la 244 (389)
|+.+|+++.++ .+|...+..++|.++++..+++++.|++|+|||++ ++++++++.+|...|++++|+|+|++|+
T Consensus 186 d~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 265 (380)
T 3iz6_a 186 DVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFG 265 (380)
T ss_dssp CTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEE
T ss_pred EcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEE
Confidence 99999999998 67888899999986678899999999999999998 5688999999999999999999999999
Q ss_pred EEc-CCeEEEEeCC-CcEEEEeccCcCCc--CCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEE
Q 016446 245 TFR-NRTVAVWNFR-GELVTSFEDHLLWH--PDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLA 320 (389)
Q Consensus 245 S~s-D~tIklWd~~-G~~l~tl~gh~~~~--~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~ 320 (389)
|++ |++|||||+. |+++.++..|.... ....|.+++|||+|++|++|+. ||+|+|||+.+++++.
T Consensus 266 s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~-----------dg~i~vwd~~~~~~~~ 334 (380)
T 3iz6_a 266 TGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS-----------NGDCYVWDTLLAEMVL 334 (380)
T ss_dssp EECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT-----------TSCEEEEETTTCCEEE
T ss_pred EEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEEC-----------CCCEEEEECCCCceEE
Confidence 999 9999999997 99999988764321 0113789999999999999876 4999999999999999
Q ss_pred Ee----cCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 321 KI----NATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 321 tl----~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
++ .+|. ..|++|+|||||++|||||.|++||||+.
T Consensus 335 ~~~~~~~~h~----------------------------------~~v~~l~~s~dg~~l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 335 NLGTLQNSHE----------------------------------GRISCLGLSSDGSALCTGSWDKNLKIWAF 373 (380)
T ss_dssp EECCSCSSCC----------------------------------CCCCEEEECSSSSEEEEECTTSCEEEEEC
T ss_pred EEecccCCCC----------------------------------CceEEEEECCCCCEEEEeeCCCCEEEEec
Confidence 88 5676 58999999999999999999999999984
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8.4e-51 Score=399.31 Aligned_cols=298 Identities=12% Similarity=0.127 Sum_probs=230.7
Q ss_pred eEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccC--CCCCcceeEeeeccc
Q 016446 24 VCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRG--KPDSGFALFESESLK 101 (389)
Q Consensus 24 tiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g--~~~~~~~l~~~~~~~ 101 (389)
..|.|++....+. . +...|.+++|||||+.|+++| + .+.++|...+|.+... ...........++..
T Consensus 15 ~~r~w~~~~~~~~----~-~~~~v~~~~fs~dG~~l~~~s----d--~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (344)
T 4gqb_B 15 AAREWNLPPNAPA----C-MERQLEAARYRSDGALLLGAS----S--LSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEA 83 (344)
T ss_dssp --------CCSCS----S-CCSEEEEEEECTTSCEEEEEE----C--CSSSCCCEEEEEESSGGGTTCGGGCSEEEEESS
T ss_pred cccccCCCCCCcc----c-ccCCEEEEEECCCCCEEEEEe----C--CceEEeeceeeeeccccccCCcceeeeeeccCC
Confidence 3578887644432 2 346899999999999998854 3 2455565555544221 111111112223334
Q ss_pred CceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEe------cCCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCC
Q 016446 102 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI------SDKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIED 174 (389)
Q Consensus 102 ~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl------~~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~t 174 (389)
.+.+|+|+ ||+ .|++|+.||+|||||+.+++++..+ |.+.|.+|+|| +|.+||+++ .|++|||||+++
T Consensus 84 ~v~~~~~s-~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs---~d~~i~iwd~~~ 158 (344)
T 4gqb_B 84 GVADLTWV-GER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGS---KDICIKVWDLAQ 158 (344)
T ss_dssp CEEEEEEE-TTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEE---TTSCEEEEETTT
T ss_pred CEEEEEEe-CCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEe---CCCeEEEEECCC
Confidence 56789998 786 5778999999999999998855332 35689999999 688898874 458999999999
Q ss_pred CeEEEEEeecCCceeEEEEEecCC-CeEEEEeCCCcEEEEECCCCeEEEEcc--cCCCceEEEEEcC-CCcEEEEEc-CC
Q 016446 175 GTVLKVFYHLLHRNKKVDFIEQFN-EKLLVKQENENLQILDVRNAELMEVSR--TEFMTPSAFIFLY-ENQLFLTFR-NR 249 (389)
Q Consensus 175 G~~l~tl~~~~~~~~~v~f~~~~~-~~l~~~s~D~tIklWd~~tg~~~~~l~--gh~~~v~sv~fsp-dg~~laS~s-D~ 249 (389)
|+++++|.+|.+.|..++|+ +++ ..+++++.|++|+|||++++++...+. .|...+.+++|+| ++++||+++ |+
T Consensus 159 ~~~~~~~~~h~~~V~~~~~~-~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 159 QVVLSSYRAHAAQVTCVAAS-PHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp TEEEEEECCCSSCEEEEEEC-SSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred CcEEEEEcCcCCceEEEEec-CCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 99999999999999999998 555 567789999999999999999988874 4666899999998 567899998 99
Q ss_pred eEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCC-CEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCC
Q 016446 250 TVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQ-DLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNC 327 (389)
Q Consensus 250 tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG-~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~ 327 (389)
+|+|||++ ++++++|++|... |++|+||||| ++|||||.| ++|||||+.+++++ .+.+|+
T Consensus 238 ~v~~wd~~~~~~~~~~~~h~~~-----v~~v~fsp~g~~~lasgs~D-----------~~i~vwd~~~~~~~-~~~~H~- 299 (344)
T 4gqb_B 238 TVSLVDTKSTSCVLSSAVHSQC-----VTGLVFSPHSVPFLASLSED-----------CSLAVLDSSLSELF-RSQAHR- 299 (344)
T ss_dssp EEEEEESCC--CCEEEECCSSC-----EEEEEECSSSSCCEEEEETT-----------SCEEEECTTCCEEE-EECCCS-
T ss_pred cEEEEECCCCcEEEEEcCCCCC-----EEEEEEccCCCeEEEEEeCC-----------CeEEEEECCCCcEE-EEcCCC-
Confidence 99999997 9999999999987 8999999998 589999875 99999999999876 578998
Q ss_pred CCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCC-EEEEecCCCcEEEccC
Q 016446 328 SPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERN-EIYTGNRHGLVHVWSN 389 (389)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~-~LaSgs~D~tIrlW~~ 389 (389)
..|++|+|||||+ +|+|||.|++|++|+.
T Consensus 300 ---------------------------------~~V~~v~~sp~~~~llas~s~D~~v~~w~v 329 (344)
T 4gqb_B 300 ---------------------------------DFVRDATWSPLNHSLLTTVGWDHQVVHHVV 329 (344)
T ss_dssp ---------------------------------SCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred ---------------------------------CCEEEEEEeCCCCeEEEEEcCCCeEEEEEC
Confidence 5899999999997 5789999999999974
No 12
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.4e-50 Score=384.10 Aligned_cols=285 Identities=12% Similarity=0.095 Sum_probs=245.3
Q ss_pred eeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCC
Q 016446 34 RRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNG 113 (389)
Q Consensus 34 ~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG 113 (389)
+..++|.+|. +.|++|+|+|||+.|++ ++.| ..++||++.+++.. ..+ ..+...+..++|+ |+|
T Consensus 4 ~~~~~~~~h~-~~V~~~~fsp~~~~l~s----~~~d------g~v~lWd~~~~~~~--~~~--~~~~~~v~~~~~~-~~~ 67 (304)
T 2ynn_A 4 DIKKTFSNRS-DRVKGIDFHPTEPWVLT----TLYS------GRVELWNYETQVEV--RSI--QVTETPVRAGKFI-ARK 67 (304)
T ss_dssp CCEEEEEEEC-SCEEEEEECSSSSEEEE----EETT------SEEEEEETTTTEEE--EEE--ECCSSCEEEEEEE-GGG
T ss_pred eeEEeecCCC-CceEEEEECCCCCEEEE----EcCC------CcEEEEECCCCcee--EEe--eccCCcEEEEEEe-CCC
Confidence 4566888875 89999999999999999 4577 89999999888651 112 1244456789998 899
Q ss_pred eEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCC-eEEEEEeecCCcee
Q 016446 114 KVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDG-TVLKVFYHLLHRNK 189 (389)
Q Consensus 114 ~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG-~~l~tl~~~~~~~~ 189 (389)
++|++|+.|++|||||+.+++++.++. ...|.+|+|+ ++.+||++ +.|++|||||++++ ++.+++.+|.+.+.
T Consensus 68 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg---s~D~~v~lWd~~~~~~~~~~~~~h~~~v~ 144 (304)
T 2ynn_A 68 NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSG---SDDLTVKLWNWENNWALEQTFEGHEHFVM 144 (304)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEE---ETTSCEEEEEGGGTTEEEEEECCCCSCEE
T ss_pred CEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEE---CCCCeEEEEECCCCcchhhhhcccCCcEE
Confidence 999999999999999999999988885 4689999999 57788876 45689999999988 56688999999999
Q ss_pred EEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEc-ccCCCceEEEEEcC--CCcEEEEEc-CCeEEEEeCC-CcEEEEe
Q 016446 190 KVDFIEQFNEKLLVKQENENLQILDVRNAELMEVS-RTEFMTPSAFIFLY--ENQLFLTFR-NRTVAVWNFR-GELVTSF 264 (389)
Q Consensus 190 ~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l-~gh~~~v~sv~fsp--dg~~laS~s-D~tIklWd~~-G~~l~tl 264 (389)
.++|+|.++..+++++.|++|||||+.++++...+ .+|...+..++|+| ++++|++++ |++|||||++ ++++.+|
T Consensus 145 ~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~ 224 (304)
T 2ynn_A 145 CVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL 224 (304)
T ss_dssp EEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceee
Confidence 99998546788999999999999999988775554 46778899999976 889999999 9999999997 9999999
Q ss_pred ccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCcc
Q 016446 265 EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSK 344 (389)
Q Consensus 265 ~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~ 344 (389)
++|... |..++|+|++++||||+.| |+|||||+.+++++++|.+|.
T Consensus 225 ~~h~~~-----v~~~~~~p~~~~l~s~s~D-----------g~i~iWd~~~~~~~~~~~~~~------------------ 270 (304)
T 2ynn_A 225 EGHMSN-----VSFAVFHPTLPIIISGSED-----------GTLKIWNSSTYKVEKTLNVGL------------------ 270 (304)
T ss_dssp ECCSSC-----EEEEEECSSSSEEEEEETT-----------SCEEEEETTTCCEEEEECCSS------------------
T ss_pred CCCCCC-----EEEEEECCCCCEEEEEcCC-----------CeEEEEECCCCceeeeccCCC------------------
Confidence 999887 8999999999999999875 999999999999999999997
Q ss_pred ccccccceecccccccCCEEEEEECCCCC--EEEEecCCCcEEEcc
Q 016446 345 KLNKSSYIRSTVGEALEDITSLFYDEERN--EIYTGNRHGLVHVWS 388 (389)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~V~svafSpdg~--~LaSgs~D~tIrlW~ 388 (389)
..|++++|+|+|. +||+|+.||.+ +|+
T Consensus 271 ----------------~~~~~~~~~~~~~~~~~asg~~~g~~-~~~ 299 (304)
T 2ynn_A 271 ----------------ERSWCIATHPTGRKNYIASGFDNGFT-VLS 299 (304)
T ss_dssp ----------------SSEEEEEECTTCGGGCEEEEETTEEE-EEE
T ss_pred ----------------ccEEEEEECCCCCceEEEEecCCceE-EEE
Confidence 5899999999986 58999887765 543
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.2e-49 Score=380.33 Aligned_cols=297 Identities=10% Similarity=0.119 Sum_probs=248.2
Q ss_pred ceeeeeeecCCcceEEEEEEeeCC-CEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe-eecccCceeEEEec
Q 016446 33 NRRICFLNVSPDEVIRSLFYNKNN-DSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFVEFDD 110 (389)
Q Consensus 33 g~~l~tl~~~~~~~v~sv~~spdg-~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~ 110 (389)
-++..+|.+|. ..|++|+|+|++ +.|++ ++.| .++++|++...+......+.. ..|...+..++|+
T Consensus 7 ~~l~~~l~gH~-~~V~~l~~~~~~~~~l~s----~s~D------~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s- 74 (319)
T 3frx_A 7 LVLRGTLEGHN-GWVTSLATSAGQPNLLLS----ASRD------KTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLT- 74 (319)
T ss_dssp EEEEEEECCCS-SCEEEEEECSSCTTEEEE----EETT------SEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEEC-
T ss_pred EEEEEEEcccc-ceEEEEEccCCCccEEEE----ecCC------ccEEEecCCCCCccccccceEEeCCcccEEEEEEC-
Confidence 34566888875 999999999975 78999 4578 889999986544311222222 2455567789998
Q ss_pred CCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCc
Q 016446 111 VNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHR 187 (389)
Q Consensus 111 pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~ 187 (389)
|||++|++|+.|++|||||+.+++++.++. ...|.+++|+ ++.+|++++ .|++||+||++ ++++.++.+|...
T Consensus 75 ~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s---~D~~i~vwd~~-~~~~~~~~~h~~~ 150 (319)
T 3frx_A 75 ADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGS---RDKTIKVWTIK-GQCLATLLGHNDW 150 (319)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEE---TTSCEEEEETT-SCEEEEECCCSSC
T ss_pred CCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEe---CCCeEEEEECC-CCeEEEEeccCCc
Confidence 999999999999999999999999988875 4689999999 578888764 56899999985 7899999999999
Q ss_pred eeEEEEEec-----CCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcE
Q 016446 188 NKKVDFIEQ-----FNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GEL 260 (389)
Q Consensus 188 ~~~v~f~~~-----~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~ 260 (389)
+..+.|.+. ++..+++++.|++|++||++++++...+.+|...|.+++|+|+|++|||++ |++|+|||+. +++
T Consensus 151 v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~ 230 (319)
T 3frx_A 151 VSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKA 230 (319)
T ss_dssp EEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEE
T ss_pred EEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 999999742 234788899999999999999999999999999999999999999999999 9999999997 999
Q ss_pred EEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCC
Q 016446 261 VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSST 340 (389)
Q Consensus 261 l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~ 340 (389)
+.++..|. . |.+++|||||++||+++. +.|++|++.++.++..++.+...
T Consensus 231 ~~~~~~~~-~-----v~~~~~sp~~~~la~~~~------------~~i~v~~~~~~~~~~~~~~~~~~------------ 280 (319)
T 3frx_A 231 MYTLSAQD-E-----VFSLAFSPNRYWLAAATA------------TGIKVFSLDPQYLVDDLRPEFAG------------ 280 (319)
T ss_dssp EEEEECCS-C-----EEEEEECSSSSEEEEEET------------TEEEEEEETTEEEEEEECCCCTT------------
T ss_pred EEEecCCC-c-----EEEEEEcCCCCEEEEEcC------------CCcEEEEeCcCeeeeccCccccc------------
Confidence 99998764 3 799999999999999864 57999999999999988765410
Q ss_pred CCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 341 GKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
....+...|.+++|||||++||+|+.|++|||||.
T Consensus 281 --------------~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 281 --------------YSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQV 315 (319)
T ss_dssp --------------CCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred --------------cccCcCcceeEEEECCCCCEEEEeecCceEEEEEE
Confidence 00112257999999999999999999999999983
No 14
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1e-49 Score=387.77 Aligned_cols=291 Identities=12% Similarity=0.141 Sum_probs=243.7
Q ss_pred cceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecC
Q 016446 32 TNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDV 111 (389)
Q Consensus 32 tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~p 111 (389)
.-+++.++.+|+...|++++|||||+.||+ ++.| ..++||++..++... ...+...+...+.+|+|+ |
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las----~~~D------~~i~iw~~~~~~~~~-~~~~~~~h~~~v~~~~~s-p 71 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLAS----CGGD------RRIRIWGTEGDSWIC-KSVLSEGHQRTVRKVAWS-P 71 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEE----EETT------SCEEEEEEETTEEEE-EEEECSSCSSCEEEEEEC-T
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEE----EcCC------CeEEEEEcCCCccee-eeeeccccCCcEEEEEEC-C
Confidence 357888999987459999999999999999 4577 889999988775311 111223455667889998 8
Q ss_pred CCeEEEEecCCCeEEEEeCCCCe--EEEEec--CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCC---eEEEEEee
Q 016446 112 NGKVLTYSAQDSIYKVFDLKNYT--MLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDG---TVLKVFYH 183 (389)
Q Consensus 112 dG~~Las~s~D~tiklWdl~~g~--~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG---~~l~tl~~ 183 (389)
||++||+|+.|++|+|||+.+++ ++.++. ...|.+|+|+ +|.+||+++ .|++|++||+.++ +++.++.+
T Consensus 72 ~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s---~D~~v~iwd~~~~~~~~~~~~~~~ 148 (345)
T 3fm0_A 72 CGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS---RDKSVWVWEVDEEDEYECVSVLNS 148 (345)
T ss_dssp TSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEE---TTSCEEEEEECTTSCEEEEEEECC
T ss_pred CCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEE---CCCeEEEEECCCCCCeEEEEEecC
Confidence 99999999999999999998764 667775 4689999999 588888874 4589999999876 56788899
Q ss_pred cCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCe--EEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC---
Q 016446 184 LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAE--LMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR--- 257 (389)
Q Consensus 184 ~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~--~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~--- 257 (389)
|...+..++|+ |++..|++++.|++|+|||+++++ +..++.+|...|++++|+|+|++|||++ |++|+|||..
T Consensus 149 h~~~v~~~~~~-p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~ 227 (345)
T 3fm0_A 149 HTQDVKHVVWH-PSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPG 227 (345)
T ss_dssp CCSCEEEEEEC-SSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTT
T ss_pred cCCCeEEEEEC-CCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCC
Confidence 99999999998 788999999999999999999885 5688999999999999999999999999 9999999951
Q ss_pred -------------CcEEEEecc-CcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCe------
Q 016446 258 -------------GELVTSFED-HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK------ 317 (389)
Q Consensus 258 -------------G~~l~tl~g-h~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~------ 317 (389)
.+|+.++.+ |... |++++|+|++.+||+++.| ++||+||+.++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~v~~~~~~~~l~s~~~d-----------~~i~vw~~~~~~~~~~~~ 291 (345)
T 3fm0_A 228 NEQGVACSGSDPSWKCICTLSGFHSRT-----IYDIAWCQLTGALATACGD-----------DAIRVFQEDPNSDPQQPT 291 (345)
T ss_dssp CTTCCCCC---CEEEEEEEECSSCSSC-----EEEEEECTTTCCEEEEETT-----------SCEEEEEECTTSCTTSCC
T ss_pred CCccceeeccCCccceeEEecCCCCCc-----EEEEEEecCCCEEEEEeCC-----------CeEEEEEeCCCCCcceee
Confidence 246778887 6654 8999999999999999875 899999987653
Q ss_pred ---EEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCC-CEEEEecCCCcEEEcc
Q 016446 318 ---CLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEER-NEIYTGNRHGLVHVWS 388 (389)
Q Consensus 318 ---~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg-~~LaSgs~D~tIrlW~ 388 (389)
....+.+|. ..|++|+|+|++ .+|||||.||+|+||+
T Consensus 292 ~~~~~~~~~~h~----------------------------------~~V~~v~~~p~~~~~laS~s~Dg~v~~W~ 332 (345)
T 3fm0_A 292 FSLTAHLHQAHS----------------------------------QDVNCVAWNPKEPGLLASCSDDGEVAFWK 332 (345)
T ss_dssp EEEEEEETTSSS----------------------------------SCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred EEEEeeeccccc----------------------------------CcEeEeEEeCCCceEEEEcCCCCcEEEEE
Confidence 123345666 699999999998 4999999999999997
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-48 Score=386.66 Aligned_cols=278 Identities=16% Similarity=0.247 Sum_probs=240.4
Q ss_pred CcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEee----------------ecccCceeE
Q 016446 43 PDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFES----------------ESLKWPGFV 106 (389)
Q Consensus 43 ~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~----------------~~~~~~~~v 106 (389)
|...|.+|+|||||++||+ +. + ..++||++.+|+... .+..+ .....+.++
T Consensus 63 h~~~V~~v~fspdg~~la~----g~-~------~~v~i~~~~~g~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v 129 (393)
T 1erj_A 63 HTSVVCCVKFSNDGEYLAT----GC-N------KTTQVYRVSDGSLVA--RLSDDSAANKDPENLNTSSSPSSDLYIRSV 129 (393)
T ss_dssp CSSCCCEEEECTTSSEEEE----EC-B------SCEEEEETTTCCEEE--EECC-----------------CCCCBEEEE
T ss_pred CCCEEEEEEECCCCCEEEE----Ec-C------CcEEEEEecCCCEEE--EecCccccccccccccccccCCCceeEEEE
Confidence 4589999999999999998 33 3 478899998887621 11000 011236789
Q ss_pred EEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEee
Q 016446 107 EFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH 183 (389)
Q Consensus 107 ~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~ 183 (389)
+|+ |||++||+|+.|++|+|||+.+++++.++. ...|.+++|+ +|.+|++++ .|++|++||+.+|+++.++..
T Consensus 130 ~~s-~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s---~d~~v~iwd~~~~~~~~~~~~ 205 (393)
T 1erj_A 130 CFS-PDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS---GDRTVRIWDLRTGQCSLTLSI 205 (393)
T ss_dssp EEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE---TTSEEEEEETTTTEEEEEEEC
T ss_pred EEC-CCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEec---CCCcEEEEECCCCeeEEEEEc
Confidence 998 899999999999999999999999988886 4689999999 588888764 468999999999999999974
Q ss_pred cCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEc-------ccCCCceEEEEEcCCCcEEEEEc-CCeEEEEe
Q 016446 184 LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVS-------RTEFMTPSAFIFLYENQLFLTFR-NRTVAVWN 255 (389)
Q Consensus 184 ~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l-------~gh~~~v~sv~fspdg~~laS~s-D~tIklWd 255 (389)
...+..++|++.++..+++++.|++|+|||++++++++.+ .+|...|++++|+|+|++|++++ |++|+|||
T Consensus 206 -~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd 284 (393)
T 1erj_A 206 -EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN 284 (393)
T ss_dssp -SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred -CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 4778999998557889999999999999999999998877 68999999999999999999999 99999999
Q ss_pred CC-------------CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEe
Q 016446 256 FR-------------GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 322 (389)
Q Consensus 256 ~~-------------G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl 322 (389)
++ +.+..++.+|... |.+++|+|+|++|+||+.| ++|++||+.+|+++.++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~sgs~D-----------~~v~iwd~~~~~~~~~l 348 (393)
T 1erj_A 285 LQNANNKSDSKTPNSGTCEVTYIGHKDF-----VLSVATTQNDEYILSGSKD-----------RGVLFWDKKSGNPLLML 348 (393)
T ss_dssp C---------------CEEEEEECCSSC-----EEEEEECGGGCEEEEEETT-----------SEEEEEETTTCCEEEEE
T ss_pred CCCCCCcccccCCCCCcceEEEecccCc-----EEEEEECCCCCEEEEEeCC-----------CeEEEEECCCCeEEEEE
Confidence 84 3567889999887 8999999999999999875 99999999999999999
Q ss_pred cCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECC------CCCEEEEecCCCcEEEcc
Q 016446 323 NATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDE------ERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 323 ~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSp------dg~~LaSgs~D~tIrlW~ 388 (389)
++|. ..|.+++|+| ++++|||||.|++||||+
T Consensus 349 ~~h~----------------------------------~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~ 386 (393)
T 1erj_A 349 QGHR----------------------------------NSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 386 (393)
T ss_dssp ECCS----------------------------------SCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred CCCC----------------------------------CCEEEEEecCCcCcCCCCCEEEEECCCCcEEECc
Confidence 9998 5899999986 799999999999999997
No 16
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.6e-49 Score=392.94 Aligned_cols=276 Identities=10% Similarity=0.160 Sum_probs=246.9
Q ss_pred cccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 3 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
+..|..+.|+ +.+||+++.||+|++||..+|++++++.+|. +.|.+|+|+|+|+.|++ ++.| .+++|
T Consensus 108 ~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~-~~V~~v~~~~~~~~l~s----gs~D------~~i~i 176 (410)
T 1vyh_C 108 RSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT-DSVQDISFDHSGKLLAS----CSAD------MTIKL 176 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCS-SCEEEEEECTTSSEEEE----EETT------SCCCE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccC-CcEEEEEEcCCCCEEEE----EeCC------CeEEE
Confidence 4689999999 8899999999999999999999999999975 89999999999999999 4577 78999
Q ss_pred eEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceEEE
Q 016446 81 EYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIMLLI 157 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~la~ 157 (389)
||+..+++. ..+ ..+...+.+++|+ |+|++|++|+.|++|++||+.+++++.++. ..+|.+++|+ +|.+|++
T Consensus 177 wd~~~~~~~--~~~--~~h~~~V~~v~~~-p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s 251 (410)
T 1vyh_C 177 WDFQGFECI--RTM--HGHDHNVSSVSIM-PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251 (410)
T ss_dssp EETTSSCEE--ECC--CCCSSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred EeCCCCcee--EEE--cCCCCCEEEEEEe-CCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEE
Confidence 999887752 111 2344557889998 899999999999999999999999998886 4689999999 6888887
Q ss_pred EecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEec-------------------CCCeEEEEeCCCcEEEEECCCC
Q 016446 158 FNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQ-------------------FNEKLLVKQENENLQILDVRNA 218 (389)
Q Consensus 158 ~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~-------------------~~~~l~~~s~D~tIklWd~~tg 218 (389)
++ .|++|++||+.+++++.++.+|.+.+..++|++. ++..+++++.|++|+|||+++|
T Consensus 252 ~s---~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~ 328 (410)
T 1vyh_C 252 CS---NDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 328 (410)
T ss_dssp EE---TTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT
T ss_pred Ec---CCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC
Confidence 64 4589999999999999999999999999999842 1557888999999999999999
Q ss_pred eEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCC
Q 016446 219 ELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEP 296 (389)
Q Consensus 219 ~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~ 296 (389)
+++.++.+|...|.+++|+|+|++|+|++ |++|++||+. ++++.++.+|... |.+++|+|+|++|||||.|
T Consensus 329 ~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~-----v~~l~~~~~~~~l~sgs~D-- 401 (410)
T 1vyh_C 329 MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF-----VTSLDFHKTAPYVVTGSVD-- 401 (410)
T ss_dssp EEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSC-----EEEEEECSSSSCEEEEETT--
T ss_pred ceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCc-----EEEEEEcCCCCEEEEEeCC--
Confidence 99999999999999999999999999999 9999999996 9999999999987 8999999999999999875
Q ss_pred cccccCCCCCeEEEEeC
Q 016446 297 EDQWMEGSAGSINVSSI 313 (389)
Q Consensus 297 ~~~~~~s~D~tIklWd~ 313 (389)
++|||||+
T Consensus 402 ---------~~i~vW~~ 409 (410)
T 1vyh_C 402 ---------QTVKVWEC 409 (410)
T ss_dssp ---------SEEEEEC-
T ss_pred ---------CcEEEEeC
Confidence 99999985
No 17
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-48 Score=379.06 Aligned_cols=317 Identities=12% Similarity=0.079 Sum_probs=272.3
Q ss_pred ccEEEEEee--cc-EEEEEecCceEEEEec----ccce------eeeeeec----C-----CcceEEEEEEeeCCCEEEE
Q 016446 4 TKVIEIVAA--RD-IVFALAHSGVCAAFSR----ETNR------RICFLNV----S-----PDEVIRSLFYNKNNDSLIT 61 (389)
Q Consensus 4 ~~v~~i~~~--~~-~~a~~~~~gtiklW~~----~tg~------~l~tl~~----~-----~~~~v~sv~~spdg~~l~s 61 (389)
..|..+.|+ ++ +||+++.||+|++|++ .+|+ ....+.. + |.+.|.+++|+|+|+.|++
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 125 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVT 125 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEE
T ss_pred CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEE
Confidence 578889999 77 9999999999999999 8888 5655554 1 4579999999999999999
Q ss_pred EEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEecC
Q 016446 62 VSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD 141 (389)
Q Consensus 62 ~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~~ 141 (389)
+ +.| ..+++|+ ..|+.. . .+ ..+...+.+++|+ |+|++|++++.|++|++||+.+++++..+..
T Consensus 126 ~----~~d------g~i~i~~-~~~~~~--~-~~-~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 189 (425)
T 1r5m_A 126 G----VEN------GELRLWN-KTGALL--N-VL-NFHRAPIVSVKWN-KDGTHIISMDVENVTILWNVISGTVMQHFEL 189 (425)
T ss_dssp E----ETT------SCEEEEE-TTSCEE--E-EE-CCCCSCEEEEEEC-TTSSEEEEEETTCCEEEEETTTTEEEEEECC
T ss_pred E----eCC------CeEEEEe-CCCCee--e-ec-cCCCccEEEEEEC-CCCCEEEEEecCCeEEEEECCCCcEEEEeec
Confidence 4 466 7888998 566541 1 11 2355567889998 8999999999999999999999999888763
Q ss_pred --Cc---------------EEEEEEcCCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEE
Q 016446 142 --KH---------------VQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVK 204 (389)
Q Consensus 142 --~~---------------V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~ 204 (389)
.. |.+++|+|+..+++++ .|+.|++||+.+++++.++..|...+..++|+ |++..++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~ 265 (425)
T 1r5m_A 190 KETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPG---PKGAIFVYQITEKTPTGKLIGHHGPISVLEFN-DTNKLLLSA 265 (425)
T ss_dssp C---------------CCCBSCCEEEETTEEEEEC---GGGCEEEEETTCSSCSEEECCCSSCEEEEEEE-TTTTEEEEE
T ss_pred cccCccceeeccccCCcceeeEEEEcCCCEEEEEc---CCCeEEEEEcCCCceeeeeccCCCceEEEEEC-CCCCEEEEE
Confidence 33 8999999777787763 45899999999999999999999999999998 778899999
Q ss_pred eCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEEC
Q 016446 205 QENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYIT 282 (389)
Q Consensus 205 s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fS 282 (389)
+.|++|++||+.+++++..+.+|...|.+++|+|++ +|++++ |++|++||+. ++++..+.+|... |.+++|+
T Consensus 266 ~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----i~~~~~s 339 (425)
T 1r5m_A 266 SDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVP-----IFAGRIS 339 (425)
T ss_dssp ETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCC-----EEEEEEC
T ss_pred cCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCcc-----EEEEEEc
Confidence 999999999999999999999999999999999999 888888 9999999996 9999999999876 8999999
Q ss_pred CCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCe--------------------EEEEecCCCCCCCcccccCCCCCCC
Q 016446 283 SDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK--------------------CLAKINATNCSPKVDDELGSSSTGK 342 (389)
Q Consensus 283 pdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~--------------------~l~tl~gH~~~~~~~~~~~~~~~~~ 342 (389)
|||++||+++.| ++|+|||+.+++ ++.++.+|...
T Consensus 340 ~~~~~l~~~~~d-----------g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 394 (425)
T 1r5m_A 340 QDGQKYAVAFMD-----------GQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDN-------------- 394 (425)
T ss_dssp TTSSEEEEEETT-----------SCEEEEECHHHHC--------------CEECCEEEEECCTTCC--------------
T ss_pred CCCCEEEEEECC-----------CeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccC--------------
Confidence 999999999865 899999999999 88999988610
Q ss_pred ccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 343 SKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
..|++++|+|||++||+|+.||+|++|+.
T Consensus 395 ------------------~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 395 ------------------DYIFDLSWNCAGNKISVAYSLQEGSVVAI 423 (425)
T ss_dssp ------------------CCEEEEEECTTSSEEEEEESSSCCEEEEC
T ss_pred ------------------CceEEEEccCCCceEEEEecCceEEEEee
Confidence 18999999999999999999999999984
No 18
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-48 Score=375.55 Aligned_cols=289 Identities=19% Similarity=0.178 Sum_probs=235.7
Q ss_pred cceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeee-cccCceeEEEec
Q 016446 32 TNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESE-SLKWPGFVEFDD 110 (389)
Q Consensus 32 tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~-~~~~~~~v~Fs~ 110 (389)
+.+++++|.+|. +.|++++|+|+ .||+ ++.| ..++||++..++.. ....+... +...+.+|+|+
T Consensus 3 ~~~~~~~~~~h~-~~v~~~~~s~~--~las----~~~D------~~i~lw~~~~~~~~-~~~~~~~~~h~~~v~~v~~s- 67 (330)
T 2hes_X 3 SINLIKSLKLYK-EKIWSFDFSQG--ILAT----GSTD------RKIKLVSVKYDDFT-LIDVLDETAHKKAIRSVAWR- 67 (330)
T ss_dssp CCEEEEEEECCS-SCEEEEEEETT--EEEE----EESS------SCEEEEECSSSCCE-EEEEECTTCCCSCEEEEEEC-
T ss_pred ccccceeeccCC-CceeeeccCCC--EEEE----EcCC------CEEEEEEecCCCeE-EEEEEecCCccCCEEEEEEC-
Confidence 467889999875 89999999997 8888 4577 88999998876431 01122112 55567889998
Q ss_pred CCCeEEEEecCCCeEEEEeCC-------CCeEEEEec--CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcC-C---Ce
Q 016446 111 VNGKVLTYSAQDSIYKVFDLK-------NYTMLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIE-D---GT 176 (389)
Q Consensus 111 pdG~~Las~s~D~tiklWdl~-------~g~~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~-t---G~ 176 (389)
|+|++||+|+.|++|||||+. +++++.++. ...|.+|+|| +|.+||+++ .|++|+|||+. . .+
T Consensus 68 p~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s---~D~~v~iwd~~~~~~~~~ 144 (330)
T 2hes_X 68 PHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCS---RDKSVWIWETDESGEEYE 144 (330)
T ss_dssp TTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEE---TTSCEEEEECCTTCCCCE
T ss_pred CCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEe---CCCEEEEEeccCCCCCeE
Confidence 899999999999999999984 345667775 4689999999 588888874 46899999994 2 37
Q ss_pred EEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCC--eEEEEcccCCCceEEEEEcCC--CcEEEEEc-CCeE
Q 016446 177 VLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNA--ELMEVSRTEFMTPSAFIFLYE--NQLFLTFR-NRTV 251 (389)
Q Consensus 177 ~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg--~~~~~l~gh~~~v~sv~fspd--g~~laS~s-D~tI 251 (389)
++.++.+|...+..|+|+ |++..|++++.|++|||||+.++ +++.++.+|...|++++|+|+ +.+|+|++ |++|
T Consensus 145 ~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v 223 (330)
T 2hes_X 145 CISVLQEHSQDVKHVIWH-PSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTV 223 (330)
T ss_dssp EEEEECCCSSCEEEEEEC-SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCE
T ss_pred EEEEeccCCCceEEEEEC-CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeE
Confidence 889999999999999998 78889999999999999999877 789999999999999999999 78999998 9999
Q ss_pred EEEeCC-C--------cEEEEecc-CcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCe--EE
Q 016446 252 AVWNFR-G--------ELVTSFED-HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK--CL 319 (389)
Q Consensus 252 klWd~~-G--------~~l~tl~g-h~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~--~l 319 (389)
||||+. + +++.++.+ |..+ |.+|+|+|++ +|||++.| ++|+|||+.+|+ ++
T Consensus 224 ~iw~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~v~~s~~~-~l~s~~~d-----------g~v~iw~~~~~~~~~~ 286 (330)
T 2hes_X 224 RVWKYMGDDEDDQQEWVCEAILPDVHKRQ-----VYNVAWGFNG-LIASVGAD-----------GVLAVYEEVDGEWKVF 286 (330)
T ss_dssp EEEEEEEECTTSCEEEEEEEECCSCCSSC-----EEEEEECTTS-CEEEEETT-----------SCEEEEEEETTEEEEE
T ss_pred EEEEecCCCccccceeEEeeecccccccc-----eEEEEEcCCC-EEEEEeCC-----------CEEEEEEcCCCceEEE
Confidence 999986 4 56777776 7766 8999999876 78888765 999999998884 34
Q ss_pred EE-ecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECC--CCCEEEEecCCCcEEEccC
Q 016446 320 AK-INATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDE--ERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 320 ~t-l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSp--dg~~LaSgs~D~tIrlW~~ 389 (389)
.. +.+|.. ..|++|+|+| ||++|||||.|++||||+.
T Consensus 287 ~~~~~~h~~---------------------------------~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 287 AKRALCHGV---------------------------------YEINVVKWLELNGKTILATGGDDGIVNFWSL 326 (330)
T ss_dssp EEESCTTTT---------------------------------SCEEEEEEC-----CCEEEEETTSEEEEEEC
T ss_pred ecccccccc---------------------------------ceEEEEEEecCCCceEEEEecCCCcEEEEEe
Confidence 33 467761 2899999999 7999999999999999984
No 19
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.7e-48 Score=372.55 Aligned_cols=275 Identities=15% Similarity=0.140 Sum_probs=243.1
Q ss_pred cccEEEEEee------ccEEEEEecCceEEEEeccccee--eeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCccee
Q 016446 3 RTKVIEIVAA------RDIVFALAHSGVCAAFSRETNRR--ICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLK 74 (389)
Q Consensus 3 ~~~v~~i~~~------~~~~a~~~~~gtiklW~~~tg~~--l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~ 74 (389)
...|.+|.|+ +++||+++.|++||+|+..++++ ..++.+|. ..|.+++|+|++..|++ ++.|
T Consensus 32 ~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~-~~v~~~~~~~~~~~l~s----~s~D----- 101 (321)
T 3ow8_A 32 DDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQ-LGVVSVDISHTLPIAAS----SSLD----- 101 (321)
T ss_dssp SSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCS-SCEEEEEECSSSSEEEE----EETT-----
T ss_pred CCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCC-CCEEEEEECCCCCEEEE----EeCC-----
Confidence 3578999986 46899999999999999876654 44678875 89999999999999999 4577
Q ss_pred eeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-C
Q 016446 75 CRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-P 151 (389)
Q Consensus 75 ~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~ 151 (389)
..++|||+.+|+.. . .+ ..+...+..++|+ |||++||+++.|++|++||+.++++..++. ...|.+++|+ +
T Consensus 102 -~~i~lWd~~~~~~~--~-~~-~~~~~~~~~~~~s-pdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spd 175 (321)
T 3ow8_A 102 -AHIRLWDLENGKQI--K-SI-DAGPVDAWTLAFS-PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPD 175 (321)
T ss_dssp -SEEEEEETTTTEEE--E-EE-ECCTTCCCCEEEC-TTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTT
T ss_pred -CcEEEEECCCCCEE--E-EE-eCCCccEEEEEEC-CCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCC
Confidence 89999999988751 1 11 1233445679998 999999999999999999999999888775 4689999999 5
Q ss_pred CceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCce
Q 016446 152 GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTP 231 (389)
Q Consensus 152 g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v 231 (389)
|.+||+++ .|++|++||+++|++++++++|...+..++|+ |++..|++++.|++|+|||+++++++.++.+|...|
T Consensus 176 g~~lasg~---~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s-pd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v 251 (321)
T 3ow8_A 176 GKYLASGA---IDGIINIFDIATGKLLHTLEGHAMPIRSLTFS-PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWV 251 (321)
T ss_dssp SSEEEEEE---TTSCEEEEETTTTEEEEEECCCSSCCCEEEEC-TTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred CCEEEEEc---CCCeEEEEECCCCcEEEEEcccCCceeEEEEc-CCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCce
Confidence 88888874 45899999999999999999999999999998 788899999999999999999999999999999999
Q ss_pred EEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEE
Q 016446 232 SAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSIN 309 (389)
Q Consensus 232 ~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIk 309 (389)
.+++|+|+|++|+|++ |++|+|||+. +++++++.+|... |++++|+|||++|||++.| ++|+
T Consensus 252 ~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~-----v~~v~~s~~g~~l~s~~~d-----------~~i~ 315 (321)
T 3ow8_A 252 LNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQ-----VWGVKYNGNGSKIVSVGDD-----------QEIH 315 (321)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC-----EEEEEECTTSSEEEEEETT-----------CCEE
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCc-----EEEEEECCCCCEEEEEeCC-----------CeEE
Confidence 9999999999999999 9999999997 9999999999887 8999999999999999875 9999
Q ss_pred EEeC
Q 016446 310 VSSI 313 (389)
Q Consensus 310 lWd~ 313 (389)
|||+
T Consensus 316 vwd~ 319 (321)
T 3ow8_A 316 IYDC 319 (321)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9995
No 20
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6e-47 Score=359.25 Aligned_cols=290 Identities=14% Similarity=0.165 Sum_probs=250.7
Q ss_pred ceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCC
Q 016446 33 NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVN 112 (389)
Q Consensus 33 g~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pd 112 (389)
.+...++.+|. +.|.+++|+|+|+.|+++ +.| ..+++|++.+|++. . .+ ..+...+.+++|+ ||
T Consensus 13 ~~~~~~~~gh~-~~v~~~~~s~~~~~l~s~----~~d------g~i~iw~~~~~~~~--~-~~-~~h~~~v~~~~~~-~~ 76 (312)
T 4ery_A 13 YALKFTLAGHT-KAVSSVKFSPNGEWLASS----SAD------KLIKIWGAYDGKFE--K-TI-SGHKLGISDVAWS-SD 76 (312)
T ss_dssp CEEEEEECCCS-SCEEEEEECTTSSEEEEE----ETT------SCEEEEETTTCCEE--E-EE-CCCSSCEEEEEEC-TT
T ss_pred ceeEEEEcccC-CcEEEEEECCCCCEEEEe----eCC------CeEEEEeCCCcccc--h-hh-ccCCCceEEEEEc-CC
Confidence 45667788875 899999999999999994 577 78999999888751 1 22 2344557789998 89
Q ss_pred CeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCcee
Q 016446 113 GKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNK 189 (389)
Q Consensus 113 G~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~ 189 (389)
|++|++++.|++|++||+.+++++.++. ...|.+++|+ ++.+|++++ .|++|++||++++++++++..|...+.
T Consensus 77 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~d~~i~iwd~~~~~~~~~~~~~~~~v~ 153 (312)
T 4ery_A 77 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS---FDESVRIWDVKTGKCLKTLPAHSDPVS 153 (312)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE---TTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred CCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe---CCCcEEEEECCCCEEEEEecCCCCcEE
Confidence 9999999999999999999999988886 4689999999 588888764 458999999999999999999999999
Q ss_pred EEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEc-ccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEecc
Q 016446 190 KVDFIEQFNEKLLVKQENENLQILDVRNAELMEVS-RTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFED 266 (389)
Q Consensus 190 ~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l-~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~g 266 (389)
.++|+ |++..+++++.|++|++||+++++++..+ ..|...+..++|+|+|++|++++ |++|++||+. ++++..+.+
T Consensus 154 ~~~~~-~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 232 (312)
T 4ery_A 154 AVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 232 (312)
T ss_dssp EEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECS
T ss_pred EEEEc-CCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEe
Confidence 99998 77889999999999999999999998775 45677899999999999999998 9999999997 999999999
Q ss_pred CcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCcccc
Q 016446 267 HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKL 346 (389)
Q Consensus 267 h~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~ 346 (389)
|..... .+......|+|++|++|+. |++|++||+.++++++++++|.
T Consensus 233 ~~~~~~--~~~~~~~~~~~~~l~sg~~-----------dg~i~vwd~~~~~~~~~~~~h~-------------------- 279 (312)
T 4ery_A 233 HKNEKY--CIFANFSVTGGKWIVSGSE-----------DNLVYIWNLQTKEIVQKLQGHT-------------------- 279 (312)
T ss_dssp SCCSSS--CCCEEEECSSSCEEEECCT-----------TSCEEEEETTTCCEEEEECCCS--------------------
T ss_pred cCCceE--EEEEEEEeCCCcEEEEECC-----------CCEEEEEECCCchhhhhhhccC--------------------
Confidence 986531 1334445578999999876 5999999999999999999998
Q ss_pred ccccceecccccccCCEEEEEECCCCCEEEEec--CCCcEEEccC
Q 016446 347 NKSSYIRSTVGEALEDITSLFYDEERNEIYTGN--RHGLVHVWSN 389 (389)
Q Consensus 347 ~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs--~D~tIrlW~~ 389 (389)
..|.+++|+|+++.||+++ .|++||+|+.
T Consensus 280 --------------~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 280 --------------DVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp --------------SCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred --------------CcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 5899999999999999997 7999999973
No 21
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.4e-46 Score=354.35 Aligned_cols=303 Identities=12% Similarity=0.123 Sum_probs=246.6
Q ss_pred ecccceeeeeeecCCcceEEEEEEeeC-CCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe-eecccCceeE
Q 016446 29 SRETNRRICFLNVSPDEVIRSLFYNKN-NDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFV 106 (389)
Q Consensus 29 ~~~tg~~l~tl~~~~~~~v~sv~~spd-g~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~~~~~~~v 106 (389)
..++.++..||.||. +.|++|+|+|+ ++.||| ++.| ++|+||++..++......+.. ..+...+.++
T Consensus 24 ~~~~~~l~~tL~GH~-~~V~~v~~sp~~~~~l~S----~s~D------~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~ 92 (340)
T 4aow_A 24 MTEQMTLRGTLKGHN-GWVTQIATTPQFPDMILS----ASRD------KTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 92 (340)
T ss_dssp --CEEEEEEEECCCS-SCEEEEEECTTCTTEEEE----EETT------SCEEEEEECCSSSCSEEEEEEECCCSSCEEEE
T ss_pred cCCceEEEEEECCcc-CCEEEEEEeCCCCCEEEE----EcCC------CeEEEEECCCCCcccceeeEEEeCCCCCEEEE
Confidence 344566777999975 99999999998 689999 4577 899999998877643333322 2355667889
Q ss_pred EEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEE-EEe
Q 016446 107 EFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLK-VFY 182 (389)
Q Consensus 107 ~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~-tl~ 182 (389)
+|+ |||++|++++.|++|++|+...+....... ...+..+.++ ++.+|++++ .|+.+++||+....... .+.
T Consensus 93 ~~s-~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s---~d~~~~~~d~~~~~~~~~~~~ 168 (340)
T 4aow_A 93 VIS-SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGS---RDKTIKLWNTLGVCKYTVQDE 168 (340)
T ss_dssp EEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEE---TTSCEEEECTTSCEEEEECSS
T ss_pred EEC-CCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeec---CCCeEEEEEeCCCceEEEEec
Confidence 998 899999999999999999999888766554 5678899999 588888764 45899999987755443 345
Q ss_pred ecCCceeEEEEEecCC-CeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-Cc
Q 016446 183 HLLHRNKKVDFIEQFN-EKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GE 259 (389)
Q Consensus 183 ~~~~~~~~v~f~~~~~-~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~ 259 (389)
+|...+..++|++... ..+++++.|++|++||+++++++..+.+|...|.+++|+|+|++|++++ |++|+|||++ ++
T Consensus 169 ~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 169 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 248 (340)
T ss_dssp SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred cccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc
Confidence 7888899999974333 4566788999999999999999999999999999999999999999999 9999999997 89
Q ss_pred EEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCC
Q 016446 260 LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSS 339 (389)
Q Consensus 260 ~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~ 339 (389)
++..+.+|.. |..++|+|++.+++++. |++|+|||+++++++.+++.+..
T Consensus 249 ~~~~~~~~~~------v~~~~~~~~~~~~~~~~------------d~~i~iwd~~~~~~~~~~~~~~~------------ 298 (340)
T 4aow_A 249 HLYTLDGGDI------INALCFSPNRYWLCAAT------------GPSIKIWDLEGKIIVDELKQEVI------------ 298 (340)
T ss_dssp EEEEEECSSC------EEEEEECSSSSEEEEEE------------TTEEEEEETTTTEEEEEECCC--------------
T ss_pred eeeeecCCce------EEeeecCCCCceeeccC------------CCEEEEEECCCCeEEEeccccce------------
Confidence 9999987643 79999999998877653 48999999999999999876541
Q ss_pred CCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 340 TGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
.....+|...|++|+|||||++||||+.||+|||||.
T Consensus 299 -------------~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~ 335 (340)
T 4aow_A 299 -------------STSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 335 (340)
T ss_dssp ------------------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred -------------eeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC
Confidence 1112233469999999999999999999999999983
No 22
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-48 Score=425.33 Aligned_cols=351 Identities=12% Similarity=0.096 Sum_probs=276.8
Q ss_pred cccEEEEEee-ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEe
Q 016446 3 RTKVIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 81 (389)
Q Consensus 3 ~~~v~~i~~~-~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~ 81 (389)
...|..|.|+ +++||+++.|++|++||+.++++++++. ++ +.|.+++|+|+|++|++ ++.| ..+++|
T Consensus 58 ~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~-~~V~~v~~sp~g~~l~s----gs~d------g~V~lw 125 (902)
T 2oaj_A 58 RSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLTTVF-VP-GKITSIDTDASLDWMLI----GLQN------GSMIVY 125 (902)
T ss_dssp CCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEEEEE-CS-SCEEEEECCTTCSEEEE----EETT------SCEEEE
T ss_pred CCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEEEEc-CC-CCEEEEEECCCCCEEEE----EcCC------CcEEEE
Confidence 4579999999 8899999999999999999999999997 33 78999999999999999 4567 789999
Q ss_pred EeccCCCCCccee-------Ee-eecccCceeEEEecCC-CeEEEEecCCCeEEEEeCCCCeEEEEecC-----------
Q 016446 82 YIRRGKPDSGFAL-------FE-SESLKWPGFVEFDDVN-GKVLTYSAQDSIYKVFDLKNYTMLYSISD----------- 141 (389)
Q Consensus 82 ~i~~g~~~~~~~l-------~~-~~~~~~~~~v~Fs~pd-G~~Las~s~D~tiklWdl~~g~~l~tl~~----------- 141 (389)
|+..+++. ...+ .. ..+.+.+.+|+|+ |+ +.+|++|+.|++| |||+.+++++.++..
T Consensus 126 d~~~~~~~-~~~i~~~~~~~~~~~~h~~~V~sl~~s-p~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~ 202 (902)
T 2oaj_A 126 DIDRDQLS-SFKLDNLQKSSFFPAARLSPIVSIQWN-PRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDF 202 (902)
T ss_dssp ETTTTEEE-EEEECCHHHHHTCSSSCCCCCCEEEEE-TTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTT
T ss_pred ECCCCccc-cceeccccccccccccCCCCeEEEEEc-cCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCccc
Confidence 99887641 0000 00 2345668889999 64 6799999999999 999999999888752
Q ss_pred ---------CcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEE--Ee---ec-------------CCceeEEEE
Q 016446 142 ---------KHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKV--FY---HL-------------LHRNKKVDF 193 (389)
Q Consensus 142 ---------~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~t--l~---~~-------------~~~~~~v~f 193 (389)
..|.+|+|| +|.+||+++ .|++|+|||+.+|+++.. +. .| ...+..|+|
T Consensus 203 ~~~~~~~h~~~V~~v~fspdg~~lasgs---~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w 279 (902)
T 2oaj_A 203 SEKTNEKRTPKVIQSLYHPNSLHIITIH---EDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYW 279 (902)
T ss_dssp CCCTTSCBCCCEEEEEECTTSSEEEEEE---TTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEE
T ss_pred ccccccccCCCeEEEEEcCCCCEEEEEE---CCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEE
Confidence 469999999 588898874 458999999999999875 31 12 335777887
Q ss_pred Ee---cCCC-----------------------------------------------------------------------
Q 016446 194 IE---QFNE----------------------------------------------------------------------- 199 (389)
Q Consensus 194 ~~---~~~~----------------------------------------------------------------------- 199 (389)
++ |++.
T Consensus 280 ~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~ 359 (902)
T 2oaj_A 280 MCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFA 359 (902)
T ss_dssp EECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHH
T ss_pred EecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcC
Confidence 53 1111
Q ss_pred ------eEEEEeCCCcEEEEECCCCeEEE-----------------------------------------EcccCCCceE
Q 016446 200 ------KLLVKQENENLQILDVRNAELME-----------------------------------------VSRTEFMTPS 232 (389)
Q Consensus 200 ------~l~~~s~D~tIklWd~~tg~~~~-----------------------------------------~l~gh~~~v~ 232 (389)
.+++.+.|++|++||+.+|.... .+.||...+.
T Consensus 360 g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~ 439 (902)
T 2oaj_A 360 GCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKR 439 (902)
T ss_dssp HTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCC
T ss_pred CCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCC
Confidence 23333446778888887764322 1456666677
Q ss_pred EEEEcCCCcEEEEEc-CCeEEEEeCC-CcEE--EE----ec-----cCcCCcCCCCeeEEEECCCCCEEEEEecCCCccc
Q 016446 233 AFIFLYENQLFLTFR-NRTVAVWNFR-GELV--TS----FE-----DHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQ 299 (389)
Q Consensus 233 sv~fspdg~~laS~s-D~tIklWd~~-G~~l--~t----l~-----gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~ 299 (389)
+|+|+|||++|||++ |+|||+||++ |++. .. +. +|... |++|+|||||++||+|+.|
T Consensus 440 sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~-----V~svafspdg~~LAsgs~D----- 509 (902)
T 2oaj_A 440 QKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELA-----VDKISFAAETLELAVSIET----- 509 (902)
T ss_dssp CCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCC-----EEEEEEETTTTEEEEEETT-----
T ss_pred cccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCc-----eeEEEecCCCCeEEEEecC-----
Confidence 777899999999999 9999999997 6431 11 22 77766 8999999999999999875
Q ss_pred ccCCCCCeEEEEeCCCC---------------------------------------------eEEEEecCCCCCCCcccc
Q 016446 300 WMEGSAGSINVSSILTG---------------------------------------------KCLAKINATNCSPKVDDE 334 (389)
Q Consensus 300 ~~~s~D~tIklWd~~tg---------------------------------------------~~l~tl~gH~~~~~~~~~ 334 (389)
|+|||||+.++ +|+.+|++|++.+....+
T Consensus 510 ------gtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svaf 583 (902)
T 2oaj_A 510 ------GDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINN 583 (902)
T ss_dssp ------SCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEE
T ss_pred ------cEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEe
Confidence 99999999877 478999999988777777
Q ss_pred cCCCCCCCccccccccceecccc--------------cccCCEEEEEEC-----CCC---CEEEEecCCCcEEEcc
Q 016446 335 LGSSSTGKSKKLNKSSYIRSTVG--------------EALEDITSLFYD-----EER---NEIYTGNRHGLVHVWS 388 (389)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~V~svafS-----pdg---~~LaSgs~D~tIrlW~ 388 (389)
+++| ..++...+++.++|+... +|..+|++|+|| ||| ++|+||+.|++||+||
T Consensus 584 SpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd 658 (902)
T 2oaj_A 584 SNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYK 658 (902)
T ss_dssp CBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEE
T ss_pred cCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEE
Confidence 7777 888888888777776432 677889999999 886 8999999999999998
No 23
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=7.5e-47 Score=421.02 Aligned_cols=362 Identities=14% Similarity=0.181 Sum_probs=307.2
Q ss_pred cccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 3 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
...|..+.|+ +++||+++.||+|++|+..+|+++.++.+|. ..|.+++|+|||+.||++ +.| ..+++
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~----~~d------~~v~v 683 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHE-DEVLCCAFSSDDSYIATC----SAD------KKVKI 683 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSEEEEE----ETT------SEEEE
T ss_pred cccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCC-CCEEEEEEecCCCEEEEE----eCC------CeEEE
Confidence 3678999999 9999999999999999999999999999875 899999999999999994 467 78999
Q ss_pred eEeccCCCCCcceeEeeecccCceeEEEecC--CCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceE
Q 016446 81 EYIRRGKPDSGFALFESESLKWPGFVEFDDV--NGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIML 155 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~p--dG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~l 155 (389)
||+.+|++. . .+ ..+...+..++|+ | ++.+|++|+.|++|++||+.+++++.++. ...|.+++|+ +|.+|
T Consensus 684 wd~~~~~~~--~-~~-~~~~~~v~~~~~~-~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 758 (1249)
T 3sfz_A 684 WDSATGKLV--H-TY-DEHSEQVNCCHFT-NKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELL 758 (1249)
T ss_dssp EETTTCCEE--E-EE-ECCSSCEEEEEEC-SSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEE
T ss_pred EECCCCceE--E-EE-cCCCCcEEEEEEe-cCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEE
Confidence 999999862 1 12 2455667889998 6 56799999999999999999999998886 4689999999 58888
Q ss_pred EEEecCCCCeeEEEEEcCCCeEEEEEe-----------------------------------------------------
Q 016446 156 LIFNRSSSHVPLKILSIEDGTVLKVFY----------------------------------------------------- 182 (389)
Q Consensus 156 a~~~~~s~d~tiklWd~~tG~~l~tl~----------------------------------------------------- 182 (389)
++++ .|++|++||+.+++++.++.
T Consensus 759 ~s~s---~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~ 835 (1249)
T 3sfz_A 759 ASCS---ADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEI 835 (1249)
T ss_dssp EEEE---SSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEE
T ss_pred EEEE---CCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEE
Confidence 8874 45899999999888776653
Q ss_pred --ecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC--
Q 016446 183 --HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-- 257 (389)
Q Consensus 183 --~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-- 257 (389)
+|...+..++|+ |++..+++++.|++|++||+.+++++..+.+|...|.+++|+|+|++|++++ |++|++||+.
T Consensus 836 ~~~~~~~v~~~~~s-p~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~ 914 (1249)
T 3sfz_A 836 HTGHHSTIQYCDFS-PYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKV 914 (1249)
T ss_dssp ECSSSSCCCEEEEC-SSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHH
T ss_pred cCCCCCceEEEEEc-CCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEcccc
Confidence 566778899998 7788999999999999999999999999999999999999999999999998 9999999731
Q ss_pred ------------------------------------------------------------------------------Cc
Q 016446 258 ------------------------------------------------------------------------------GE 259 (389)
Q Consensus 258 ------------------------------------------------------------------------------G~ 259 (389)
++
T Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~ 994 (1249)
T 3sfz_A 915 CKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNR 994 (1249)
T ss_dssp HSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTS
T ss_pred ceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCc
Confidence 44
Q ss_pred EEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCC----------------------------c-ccccCCCCCeEEE
Q 016446 260 LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEP----------------------------E-DQWMEGSAGSINV 310 (389)
Q Consensus 260 ~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~----------------------------~-~~~~~s~D~tIkl 310 (389)
++.++.+|... |.+++|+|||++|++++.|.. + ..++++.|++|++
T Consensus 995 ~~~~~~~h~~~-----v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~v 1069 (1249)
T 3sfz_A 995 VFSSGVGHKKA-----VRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKV 1069 (1249)
T ss_dssp CEEECCCCSSC-----CCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEE
T ss_pred eeeecccCCCc-----eEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEE
Confidence 55667778776 789999999999999998743 0 1156788999999
Q ss_pred EeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceec--------ccccccCCEEEEEECCCCCEEEEecCCC
Q 016446 311 SSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRS--------TVGEALEDITSLFYDEERNEIYTGNRHG 382 (389)
Q Consensus 311 Wd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~V~svafSpdg~~LaSgs~D~ 382 (389)
||+.+|+++.++.+|...+....+++.+...++...+++.++|+ ++.+|...|++++|||||++||+|+.||
T Consensus 1070 wd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg 1149 (1249)
T 3sfz_A 1070 WNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNG 1149 (1249)
T ss_dssp EETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred EECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCC
Confidence 99999999999999998777667777776555555555555544 5566778999999999999999999999
Q ss_pred cEEEccC
Q 016446 383 LVHVWSN 389 (389)
Q Consensus 383 tIrlW~~ 389 (389)
+|++||.
T Consensus 1150 ~i~vwd~ 1156 (1249)
T 3sfz_A 1150 EIRIWNV 1156 (1249)
T ss_dssp CCCEEES
T ss_pred EEEEEEC
Confidence 9999983
No 24
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.3e-47 Score=367.31 Aligned_cols=297 Identities=12% Similarity=0.120 Sum_probs=237.3
Q ss_pred ceeeeeeecCCcceEEEEEE-----ee-CCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCC--cceeEe-eecccCc
Q 016446 33 NRRICFLNVSPDEVIRSLFY-----NK-NNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDS--GFALFE-SESLKWP 103 (389)
Q Consensus 33 g~~l~tl~~~~~~~v~sv~~-----sp-dg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~--~~~l~~-~~~~~~~ 103 (389)
.++..+|.+|. +.|++|+| +| ||+.||+ ++.| .+++||++..++... ...+.. ..|...+
T Consensus 11 ~~~~~~l~gH~-~~V~~~~~~~s~~~~~d~~~l~s----gs~D------~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V 79 (343)
T 2xzm_R 11 VVKRGILEGHS-DWVTSIVAGFSQKENEDSPVLIS----GSRD------KTVMIWKLYEEEQNGYFGIPHKALTGHNHFV 79 (343)
T ss_dssp EEEEEEEECCS-SCEEEEEECCCSSTTCCCCEEEE----EETT------SCEEEEEECSSCCSSBSEEEEEEECCCSSCE
T ss_pred eeeeeeeccch-hhhhheeeEEEeecCCCCCEEEE----EcCC------CEEEEEECCcCCcccccccccchhccCCCce
Confidence 56778899875 89999999 77 9999999 5577 889999997655321 111211 2355567
Q ss_pred eeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEE
Q 016446 104 GFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKV 180 (389)
Q Consensus 104 ~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~t 180 (389)
.+++|+ |+|++|++|+.|++|||||+.+++++.++. ...|.+|+|+ +|.+||+++ .|++|+|||+. +++...
T Consensus 80 ~~~~~~-~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~---~d~~i~~wd~~-~~~~~~ 154 (343)
T 2xzm_R 80 SDLALS-QENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAG---AEREIKLWNIL-GECKFS 154 (343)
T ss_dssp EEEEEC-SSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEE---TTSCEEEEESS-SCEEEE
T ss_pred EEEEEC-CCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEc---CCCEEEEEecc-CCceee
Confidence 889998 899999999999999999999999988875 5689999999 588888774 46899999997 566655
Q ss_pred Ee---ecCCceeEEEEEecCC----------CeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc
Q 016446 181 FY---HLLHRNKKVDFIEQFN----------EKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR 247 (389)
Q Consensus 181 l~---~~~~~~~~v~f~~~~~----------~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s 247 (389)
+. .|...+..++|+ |++ ..+++++.|++|+||| .+++++.++.+|...|.+++|+|||++||+++
T Consensus 155 ~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs 232 (343)
T 2xzm_R 155 SAEKENHSDWVSCVRYS-PIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGG 232 (343)
T ss_dssp CCTTTSCSSCEEEEEEC-CCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred eecccCCCceeeeeeec-cccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEc
Confidence 54 678889999998 444 5788899999999999 46788889999999999999999999999999
Q ss_pred -CCeEEEEeC-C-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEE--Ee
Q 016446 248 -NRTVAVWNF-R-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLA--KI 322 (389)
Q Consensus 248 -D~tIklWd~-~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~--tl 322 (389)
|++|+|||+ . +.+...+. |... |.+++|+||+++|++++ |++|||||+.+++++. ++
T Consensus 233 ~dg~v~iwd~~~~~~~~~~~~-~~~~-----v~~v~~sp~~~~la~~~------------d~~v~iw~~~~~~~~~~~~~ 294 (343)
T 2xzm_R 233 KDKKLLIWDILNLTYPQREFD-AGST-----INQIAFNPKLQWVAVGT------------DQGVKIFNLMTQSKAPVCTI 294 (343)
T ss_dssp TTCEEEEEESSCCSSCSEEEE-CSSC-----EEEEEECSSSCEEEEEE------------SSCEEEEESSSCCSCSEEEC
T ss_pred CCCeEEEEECCCCcccceeec-CCCc-----EEEEEECCCCCEEEEEC------------CCCEEEEEeCCCCCCceEEe
Confidence 999999999 4 55555553 3333 89999999999998764 4789999999887654 55
Q ss_pred cCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEcc
Q 016446 323 NATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 323 ~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
..+.. .......++...|++|+|+|||+.||+|+.||+||+|+
T Consensus 295 ~~~~~-----------------------~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~ 337 (343)
T 2xzm_R 295 EAEPI-----------------------TKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFS 337 (343)
T ss_dssp CCCSG-----------------------GGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEE
T ss_pred ecCcc-----------------------hhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEE
Confidence 53220 00000112336899999999999999999999999997
No 25
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=8.2e-47 Score=360.61 Aligned_cols=277 Identities=13% Similarity=0.111 Sum_probs=239.8
Q ss_pred cccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 3 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
...|..|.|+ +++||+++.||+|+|||.+++++++++.+|. ..|++++|+|+|+.|++ ++.| ..+++
T Consensus 13 ~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s----~s~d------~~i~v 81 (304)
T 2ynn_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTE-TPVRAGKFIARKNWIIV----GSDD------FRIRV 81 (304)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCS-SCEEEEEEEGGGTEEEE----EETT------SEEEE
T ss_pred CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccC-CcEEEEEEeCCCCEEEE----ECCC------CEEEE
Confidence 3579999999 9999999999999999999999999999875 89999999999999999 4577 89999
Q ss_pred eEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCe-EEEEec--CCcEEEEEEcC--CceE
Q 016446 81 EYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSIS--DKHVQEIKISP--GIML 155 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~-~l~tl~--~~~V~~vafS~--g~~l 155 (389)
||+.+|+.. ..+ ..+...+.+++|+ |++++|++|+.|++|||||+.++. +..++. ...|.+++|+| +.+|
T Consensus 82 wd~~~~~~~--~~~--~~h~~~v~~~~~~-~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 156 (304)
T 2ynn_A 82 FNYNTGEKV--VDF--EAHPDYIRSIAVH-PTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF 156 (304)
T ss_dssp EETTTCCEE--EEE--ECCSSCEEEEEEC-SSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEE
T ss_pred EECCCCcEE--EEE--eCCCCcEEEEEEc-CCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEE
Confidence 999998861 112 2455667889998 899999999999999999998874 556664 56899999996 5678
Q ss_pred EEEecCCCCeeEEEEEcCCCeEEEEEe-ecCCceeEEEEEec-CCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEE
Q 016446 156 LIFNRSSSHVPLKILSIEDGTVLKVFY-HLLHRNKKVDFIEQ-FNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSA 233 (389)
Q Consensus 156 a~~~~~s~d~tiklWd~~tG~~l~tl~-~~~~~~~~v~f~~~-~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~s 233 (389)
|+++ .|++||+||+.++++..++. +|...+..+.|.+. ++.++++++.|++|||||+++++++.++.+|...|.+
T Consensus 157 ~sgs---~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~ 233 (304)
T 2ynn_A 157 ASGC---LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSF 233 (304)
T ss_dssp EEEE---TTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred EEEe---CCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEE
Confidence 8764 55899999999988887776 55577889999742 4568888999999999999999999999999999999
Q ss_pred EEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCC--EEEEEecCCCcccccCCCCCeEE
Q 016446 234 FIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD--LIISYCKAEPEDQWMEGSAGSIN 309 (389)
Q Consensus 234 v~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~--~laS~s~D~~~~~~~~s~D~tIk 309 (389)
++|+|++++|+|++ |++|||||++ ++++++|..|... +++++|+|+|+ +||+|+. +.+.
T Consensus 234 ~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~asg~~------------~g~~ 296 (304)
T 2ynn_A 234 AVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLER-----SWCIATHPTGRKNYIASGFD------------NGFT 296 (304)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSS-----EEEEEECTTCGGGCEEEEET------------TEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCcc-----EEEEEECCCCCceEEEEecC------------CceE
Confidence 99999999999999 9999999997 9999999999876 79999999986 6898875 4678
Q ss_pred EEeCCC
Q 016446 310 VSSILT 315 (389)
Q Consensus 310 lWd~~t 315 (389)
+|++.+
T Consensus 297 ~~~~~~ 302 (304)
T 2ynn_A 297 VLSLGN 302 (304)
T ss_dssp EEECC-
T ss_pred EEEecc
Confidence 999764
No 26
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.8e-46 Score=363.78 Aligned_cols=276 Identities=9% Similarity=0.143 Sum_probs=241.0
Q ss_pred cccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 3 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
...|..+.|+ +++||+++.||+|++||..+++++.++..+. ..|.+++|+|+|+.|++ ++.| ..+++
T Consensus 55 ~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s----~~~d------~~v~i 123 (340)
T 1got_B 55 LAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRS-SWVMTCAYAPSGNYVAC----GGLD------NICSI 123 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSS-SCEEEEEECTTSSEEEE----EETT------CEEEE
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCC-ccEEEEEECCCCCEEEE----EeCC------CeEEE
Confidence 3579999999 8899999999999999999999999999875 89999999999999999 4577 88999
Q ss_pred eEeccCCCCCcceeEe-eecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEcC-CceEE
Q 016446 81 EYIRRGKPDSGFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP-GIMLL 156 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS~-g~~la 156 (389)
|++..++.... .... ..+.+.+..++|+ |+++ |++++.|++|++||+.+++++.++. ...|.+++|+| +.+|+
T Consensus 124 w~~~~~~~~~~-~~~~~~~h~~~v~~~~~~-~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 200 (340)
T 1got_B 124 YNLKTREGNVR-VSRELAGHTGYLSCCRFL-DDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV 200 (340)
T ss_dssp EETTTCSBSCE-EEEEEECCSSCEEEEEEE-ETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EECccCCCcce-eEEEecCCCccEEEEEEC-CCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEE
Confidence 99877653111 1111 2355567789998 7776 8889999999999999999998886 46899999994 77887
Q ss_pred EEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEccc--CCCceEEE
Q 016446 157 IFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT--EFMTPSAF 234 (389)
Q Consensus 157 ~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~g--h~~~v~sv 234 (389)
+++ .|++|++||+.+|++++++.+|...+..++|+ |++..+++++.|++|+|||+++++++..+.. +...|.++
T Consensus 201 sg~---~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~ 276 (340)
T 1got_B 201 SGA---CDASAKLWDVREGMCRQTFTGHESDINAICFF-PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSV 276 (340)
T ss_dssp EEE---TTSCEEEEETTTCSEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred EEe---CCCcEEEEECCCCeeEEEEcCCcCCEEEEEEc-CCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEE
Confidence 764 45899999999999999999999999999998 7889999999999999999999998887653 33579999
Q ss_pred EEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEe
Q 016446 235 IFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSS 312 (389)
Q Consensus 235 ~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd 312 (389)
+|+|+|++|++++ |++|++||+. ++++.+|.+|..+ |.+++|+|||++|||||.| ++|||||
T Consensus 277 ~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~-----v~~~~~s~dg~~l~s~s~D-----------~~i~iWd 340 (340)
T 1got_B 277 SFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNR-----VSCLGVTDDGMAVATGSWD-----------SFLKIWN 340 (340)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC-----EEEEEECTTSSCEEEEETT-----------SCEEEEC
T ss_pred EECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCc-----EEEEEEcCCCCEEEEEcCC-----------ccEEecC
Confidence 9999999999998 9999999996 9999999999987 8999999999999999875 9999997
No 27
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-49 Score=382.69 Aligned_cols=350 Identities=14% Similarity=0.100 Sum_probs=265.0
Q ss_pred cEEEEEee--cc-EEEEE----------ecCceEEEEecccce---eeeeeecCCcceEEEEEEeeCCCEEEEEEEeecC
Q 016446 5 KVIEIVAA--RD-IVFAL----------AHSGVCAAFSRETNR---RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASD 68 (389)
Q Consensus 5 ~v~~i~~~--~~-~~a~~----------~~~gtiklW~~~tg~---~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~ 68 (389)
+|..+.|+ ++ +||++ +.|++|++|++.+++ ++..+. |...|.+++|+|+|+.|+++ +.
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~----~~ 87 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQ--VDSKFNDLDWSHNNKIIAGA----LD 87 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCC--CSSCEEEEEECSSSSCEEEE----ES
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEe--cCCceEEEEECCCCCeEEEE----cc
Confidence 45667777 55 99999 899999999998876 555553 35899999999999999994 46
Q ss_pred CCcceeeeeeeEeEeccCCCCCcceeEe-eecccCceeEEEecCC-CeEEEEecCCCeEEEEeCCCCe------EEEEe-
Q 016446 69 NFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFVEFDDVN-GKVLTYSAQDSIYKVFDLKNYT------MLYSI- 139 (389)
Q Consensus 69 d~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~pd-G~~Las~s~D~tiklWdl~~g~------~l~tl- 139 (389)
| ..+++|++...... ...+.. ..+...+.+++|+ |+ +++|++++.|++|++||+.+++ ....+
T Consensus 88 d------g~v~vw~~~~~~~~-~~~~~~~~~h~~~v~~~~~~-~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 159 (416)
T 2pm9_A 88 N------GSLELYSTNEANNA-INSMARFSNHSSSVKTVKFN-AKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPG 159 (416)
T ss_dssp S------SCEEEECCSSTTSC-CCEEEECCCSSSCCCEEEEC-SSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCC
T ss_pred C------CeEEEeeccccccc-ccchhhccCCccceEEEEEc-CCCCCEEEEEcCCCeEEEEECCCCccccccccccccc
Confidence 7 78999998762210 011222 2455667889998 77 8999999999999999999887 44333
Q ss_pred ----cCCcEEEEEEcC--CceEEEEecCCCCeeEEEEEcCCCeEEEEEeec------CCceeEEEEEecCC-CeEEEEeC
Q 016446 140 ----SDKHVQEIKISP--GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHL------LHRNKKVDFIEQFN-EKLLVKQE 206 (389)
Q Consensus 140 ----~~~~V~~vafS~--g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~------~~~~~~v~f~~~~~-~~l~~~s~ 206 (389)
+...|.+++|+| +.+|+++ +.|++|++||+++++++.++..| ...+..++|+ |++ ..+++++.
T Consensus 160 ~~~~~~~~v~~~~~~~~~~~~l~~~---~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~ 235 (416)
T 2pm9_A 160 QSMSSVDEVISLAWNQSLAHVFASA---GSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWH-PKNSTRVATATG 235 (416)
T ss_dssp CSCCSSCCCCEEEECSSCTTEEEEE---SSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEEC-SSCTTEEEEEEC
T ss_pred cccCCCCCeeEEEeCCCCCcEEEEE---cCCCCEEEEECCCCCcceEEeccccccccCCceEEEEEC-CCCCCEEEEEEC
Confidence 356899999994 5677766 45689999999999999999976 6789999998 555 57778889
Q ss_pred CC---cEEEEECCCC-eEEEEcc-cCCCceEEEEEcC-CCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeE
Q 016446 207 NE---NLQILDVRNA-ELMEVSR-TEFMTPSAFIFLY-ENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNN 278 (389)
Q Consensus 207 D~---tIklWd~~tg-~~~~~l~-gh~~~v~sv~fsp-dg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~s 278 (389)
|+ +|++||++++ ++++.+. +|...|.+++|+| ++++|++++ |++|++||++ ++++.++.+|..+ |.+
T Consensus 236 d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~-----v~~ 310 (416)
T 2pm9_A 236 SDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNW-----CFK 310 (416)
T ss_dssp CSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSC-----CCC
T ss_pred CCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCc-----eEE
Confidence 98 9999999997 7788888 9999999999999 999999999 9999999997 9999999999887 799
Q ss_pred EEECCCC-CEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCC--CCCCcccccCCCCCCCccccccccceecc
Q 016446 279 IYITSDQ-DLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATN--CSPKVDDELGSSSTGKSKKLNKSSYIRST 355 (389)
Q Consensus 279 v~fSpdG-~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (389)
++|+||| ++||+++. |++|+|||+.+++......... .......+++.++..+...-.....+ ..
T Consensus 311 ~~~s~~~~~~l~s~~~-----------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 378 (416)
T 2pm9_A 311 TKFAPEAPDLFACASF-----------DNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHL-QA 378 (416)
T ss_dssp EEECTTCTTEEEECCS-----------SSEEEEEESCCCCCSSCC----------------------CCSCCCSSCC-CC
T ss_pred EEECCCCCCEEEEEec-----------CCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccc-cC
Confidence 9999999 89999876 4999999999887654432200 00000011111110000000000111 22
Q ss_pred cccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 356 VGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 356 ~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
...+...|.+++|||||++||+|+.|++|+||+.
T Consensus 379 ~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~ 412 (416)
T 2pm9_A 379 PTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNP 412 (416)
T ss_dssp CSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCC
T ss_pred CccccCCccceEEeeCCeEEEEeCCCCeEEEEEe
Confidence 2234468889999999999999999999999984
No 28
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.1e-45 Score=347.90 Aligned_cols=318 Identities=11% Similarity=0.048 Sum_probs=265.5
Q ss_pred cccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 3 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
...|..+.|+ |+.+|++..++.+..|............+| .+.|.+++|+|+|+.|++ ++ | ..+++
T Consensus 9 ~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~~----~~-d------g~i~i 76 (337)
T 1gxr_A 9 SKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNH-GEVVCAVTISNPTRHVYT----GG-K------GCVKV 76 (337)
T ss_dssp EEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECC-SSCCCEEEECSSSSEEEE----EC-B------SEEEE
T ss_pred CCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccC-CCceEEEEEecCCcEEEE----cC-C------CeEEE
Confidence 3567888888 899988888887777765544444344454 589999999999999988 44 6 78999
Q ss_pred eEeccCCCCCcceeEe-eecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCe--EEEEec--CCcEEEEEEc-CCce
Q 016446 81 EYIRRGKPDSGFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT--MLYSIS--DKHVQEIKIS-PGIM 154 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~--~l~tl~--~~~V~~vafS-~g~~ 154 (389)
|++..++.......+. ..+...+.+++|+ |||++|++++.|++|++||+.+++ +...+. ...|.+++|+ ++.+
T Consensus 77 w~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 155 (337)
T 1gxr_A 77 WDISHPGNKSPVSQLDCLNRDNYIRSCKLL-PDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKV 155 (337)
T ss_dssp EETTSTTCCSCSEEEECSCTTSBEEEEEEC-TTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSE
T ss_pred EECCCCCceeeeecccccCCCCcEEEEEEc-CCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCE
Confidence 9998776532222222 2345567789998 899999999999999999999887 445554 4689999999 5778
Q ss_pred EEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEE
Q 016446 155 LLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAF 234 (389)
Q Consensus 155 la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv 234 (389)
|++++ .|++|++||+++++++.++..|...+..++|+ |++..+++++.|++|++||+++++++..+. |...+.++
T Consensus 156 l~~~~---~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~ 230 (337)
T 1gxr_A 156 CFSCC---SDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS-NDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSL 230 (337)
T ss_dssp EEEEE---TTSCEEEEETTTTEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEE
T ss_pred EEEEe---CCCcEEEEeCCCCceeeeeecccCceEEEEEC-CCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEE
Confidence 88764 45799999999999999999999999999998 678899999999999999999999988864 77889999
Q ss_pred EEcCCCcEEEEEc-CCeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeC
Q 016446 235 IFLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSI 313 (389)
Q Consensus 235 ~fspdg~~laS~s-D~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~ 313 (389)
+|+|+|++|++++ |++|++||++......+.+|... |.+++|+|||++|++++.| ++|++||+
T Consensus 231 ~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d-----------g~i~~~~~ 294 (337)
T 1gxr_A 231 GYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESC-----VLSLKFAYCGKWFVSTGKD-----------NLLNAWRT 294 (337)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSC-----EEEEEECTTSSEEEEEETT-----------SEEEEEET
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccc-----eeEEEECCCCCEEEEecCC-----------CcEEEEEC
Confidence 9999999999998 99999999984334578888876 8999999999999999865 99999999
Q ss_pred CCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 314 LTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 314 ~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
.+++++..+ .|. ..|.+++|+|||+.|++|+.||+|++|+.
T Consensus 295 ~~~~~~~~~-~~~----------------------------------~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 295 PYGASIFQS-KES----------------------------------SSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp TTCCEEEEE-ECS----------------------------------SCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CCCeEEEEe-cCC----------------------------------CcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 999998654 455 48999999999999999999999999983
No 29
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-48 Score=407.39 Aligned_cols=311 Identities=14% Similarity=0.040 Sum_probs=229.5
Q ss_pred cEEEEEecCceEEEEecccceee----eeeecCCcceEEEEEEeeC------CCEEEEEEEeecCCCcceeeeeeeEeEe
Q 016446 14 DIVFALAHSGVCAAFSRETNRRI----CFLNVSPDEVIRSLFYNKN------NDSLITVSVYASDNFSSLKCRSTKIEYI 83 (389)
Q Consensus 14 ~~~a~~~~~gtiklW~~~tg~~l----~tl~~~~~~~v~sv~~spd------g~~l~s~s~~~~~d~~~l~~~~~~l~~i 83 (389)
+++|+++.|++||||+++++++. .++.++ ...|++|+|+|+ ++.||++ +.| .+++||++
T Consensus 174 ~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~-~~~V~~v~wsp~~~~~~~~~~LAs~----s~D------gtvrlWd~ 242 (524)
T 2j04_B 174 EMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHS-FGEVWDLKWHEGCHAPHLVGCLSFV----SQE------GTINFLEI 242 (524)
T ss_dssp --------CEEEEEEEEETTTCCEEEEEEEEEC-CCSEEEEEECSSCCCSSSSCEEEEE----ETT------SCEEEEEC
T ss_pred hhhccCCCCceEEEEEccCCCCCceEEEEEEec-CCcEEEEEECCCCCCCCCCceEEEE----ecC------CeEEEEEc
Confidence 35677889999999999888753 345665 478999999997 5799994 467 78999999
Q ss_pred ccCCCCC------cceeEe-eecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCe-EEEEe--cCCcEEEE--EEcC
Q 016446 84 RRGKPDS------GFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSI--SDKHVQEI--KISP 151 (389)
Q Consensus 84 ~~g~~~~------~~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~-~l~tl--~~~~V~~v--afS~ 151 (389)
..++... ..+.+. ..+...+.+|+|+ |++ +||+|+.|++|+|||+.+++ ++.++ |...|.+| +|+|
T Consensus 243 ~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s-~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~ 320 (524)
T 2j04_B 243 IDNATDVHVFKMCEKPSLTLSLADSLITTFDFL-SPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSD 320 (524)
T ss_dssp CCCSSSSSEEECCCSCSEEECCTTTCEEEEEES-SSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCT
T ss_pred CCCccccccceeecCceEEEEcCCCCEEEEEec-CCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCC
Confidence 8775421 011122 2344567889998 554 79999999999999998775 33444 56789999 5675
Q ss_pred -C-ceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCC--ceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccC
Q 016446 152 -G-IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLH--RNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTE 227 (389)
Q Consensus 152 -g-~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~--~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh 227 (389)
| .+||++ +.|++|||||++++++++++.+|.. .+.+|+|+ |++..+++++.|++|||||++++.++.++.+|
T Consensus 321 ~g~~~laS~---S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fs-p~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH 396 (524)
T 2j04_B 321 FEDTVVSTV---AVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYC-PQIYSYIYSDGASSLRAVPSRAAFAVHPLVSR 396 (524)
T ss_dssp TSCCEEEEE---ETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEE-TTTTEEEEECSSSEEEEEETTCTTCCEEEEEC
T ss_pred CCCeEEEEe---ccCCeEEEEECCCCCcccccccccccCcccceEeC-CCcCeEEEeCCCCcEEEEECcccccceeeecC
Confidence 5 688876 4568999999999999999988764 47899998 77888999999999999999999999999999
Q ss_pred CCceEEEEEcCCCcEEEEEc-CCeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCC
Q 016446 228 FMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAG 306 (389)
Q Consensus 228 ~~~v~sv~fspdg~~laS~s-D~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~ 306 (389)
...|++|+|||+|++||||+ |++|+|||+.++++.+++++..++....|++++|||||+.+.. . +
T Consensus 397 ~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~--~------------~ 462 (524)
T 2j04_B 397 ETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRI--D------------S 462 (524)
T ss_dssp SSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEE--C------------C
T ss_pred CCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEc--c------------C
Confidence 99999999999999999999 9999999998666554433222211112689999999996643 1 2
Q ss_pred eEEEEeCC-CCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCC---EEEEecCCC
Q 016446 307 SINVSSIL-TGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERN---EIYTGNRHG 382 (389)
Q Consensus 307 tIklWd~~-tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~---~LaSgs~D~ 382 (389)
.+++|+.. +|+++.+|.+|+ .+|++|+||||++ +||+|+.||
T Consensus 463 ~~~~~~~~~~g~~~~~l~gh~----------------------------------~~V~~Vafsp~~~~~~~lAsg~~~g 508 (524)
T 2j04_B 463 SYEVYPLTVNDVSKAKIDAHG----------------------------------INITCTKWNETSAGGKCYAFSNSAG 508 (524)
T ss_dssp CCCCCC-------------CC----------------------------------CSCCCEEECCSTTTTTEEEEECTTS
T ss_pred CceecccccCCcceeeecCCC----------------------------------ceEEEEECCCCCCccHHHHhhccCc
Confidence 44555543 699999999998 5899999999964 999999999
Q ss_pred cEEEccC
Q 016446 383 LVHVWSN 389 (389)
Q Consensus 383 tIrlW~~ 389 (389)
+||||+.
T Consensus 509 ~vrlw~l 515 (524)
T 2j04_B 509 LLTLEYL 515 (524)
T ss_dssp EEEEEEC
T ss_pred eEEEEEc
Confidence 9999974
No 30
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.9e-46 Score=379.20 Aligned_cols=315 Identities=11% Similarity=0.133 Sum_probs=269.5
Q ss_pred ccEEEEEee--cc-EEEEEecCceEEEEecccceeeeeeecCCcc---eEEEEEEeeC-CCEEEEEEEeecCCCcceeee
Q 016446 4 TKVIEIVAA--RD-IVFALAHSGVCAAFSRETNRRICFLNVSPDE---VIRSLFYNKN-NDSLITVSVYASDNFSSLKCR 76 (389)
Q Consensus 4 ~~v~~i~~~--~~-~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~---~v~sv~~spd-g~~l~s~s~~~~~d~~~l~~~ 76 (389)
..|..+.|+ ++ ++++++.|++|++|+..+++++.++.+|. . .|.+++|+|+ |+.|+++ +.| .
T Consensus 161 ~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~----~~d------g 229 (615)
T 1pgu_A 161 QRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHH-KQGSFVRDVEFSPDSGEFVITV----GSD------R 229 (615)
T ss_dssp SCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSS-CTTCCEEEEEECSTTCCEEEEE----ETT------C
T ss_pred ccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccC-CCCceEEEEEECCCCCCEEEEE----eCC------C
Confidence 568899999 44 89999999999999999999999999875 7 8999999999 9999994 567 7
Q ss_pred eeeEeEeccCCCCCcceeEee---ecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEecC------CcEEEE
Q 016446 77 STKIEYIRRGKPDSGFALFES---ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD------KHVQEI 147 (389)
Q Consensus 77 ~~~l~~i~~g~~~~~~~l~~~---~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~~------~~V~~v 147 (389)
.+++|++.+|+.. ..+.. .+...+.+++|+ +|++|++++.|++|++||+.+++++.++.. ..+.++
T Consensus 230 ~i~vwd~~~~~~~---~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 304 (615)
T 1pgu_A 230 KISCFDGKSGEFL---KYIEDDQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGV 304 (615)
T ss_dssp CEEEEETTTCCEE---EECCBTTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEE
T ss_pred eEEEEECCCCCEe---EEecccccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEE
Confidence 8999999988862 11211 455567789996 899999999999999999999999888752 478999
Q ss_pred EEcCCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEe--------------------------------
Q 016446 148 KISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIE-------------------------------- 195 (389)
Q Consensus 148 afS~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~-------------------------------- 195 (389)
.|+++.++++++. |++|++||+.+++++.++.+|...+..++| +
T Consensus 305 ~~~~~~~l~~~~~---~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~ 380 (615)
T 1pgu_A 305 VATGNGRIISLSL---DGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN 380 (615)
T ss_dssp EEEETTEEEEEET---TSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEEC
T ss_pred EeCCCCeEEEEEC---CCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEE
Confidence 9988888988754 579999999999999999887766655554 1
Q ss_pred cC-------------------------------------------------------------------------CCeEE
Q 016446 196 QF-------------------------------------------------------------------------NEKLL 202 (389)
Q Consensus 196 ~~-------------------------------------------------------------------------~~~l~ 202 (389)
++ +..++
T Consensus 381 ~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 460 (615)
T 1pgu_A 381 SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVA 460 (615)
T ss_dssp CSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEE
T ss_pred CCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEE
Confidence 01 33444
Q ss_pred EEeC-CCcEEEEECCCCeEE-EEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEecc-CcCCcCCCCee
Q 016446 203 VKQE-NENLQILDVRNAELM-EVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFED-HLLWHPDCNTN 277 (389)
Q Consensus 203 ~~s~-D~tIklWd~~tg~~~-~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~g-h~~~~~~~~v~ 277 (389)
+++. |++|++||+.++++. ..+.+|...|.+++|+|||++|++++ |++|++||+. ++++.++.+ |... |.
T Consensus 461 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~-----v~ 535 (615)
T 1pgu_A 461 VGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSK-----IN 535 (615)
T ss_dssp EEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSC-----EE
T ss_pred EeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCc-----ee
Confidence 5555 777888888777666 77889999999999999999999998 9999999996 999999998 8876 89
Q ss_pred EEEECC----------CCCEEEEEecCCCcccccCCCCCeEEEEeCCCC-eEEEEecCCCCCCCcccccCCCCCCCcccc
Q 016446 278 NIYITS----------DQDLIISYCKAEPEDQWMEGSAGSINVSSILTG-KCLAKINATNCSPKVDDELGSSSTGKSKKL 346 (389)
Q Consensus 278 sv~fSp----------dG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg-~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~ 346 (389)
+++||| ||++||+++.| ++|+|||+.++ +++.++.+|.
T Consensus 536 ~~~~sp~~~~~~~~~~~~~~l~~~~~d-----------g~i~iw~~~~~~~~~~~~~~h~-------------------- 584 (615)
T 1pgu_A 536 AISWKPAEKGANEEEIEEDLVATGSLD-----------TNIFIYSVKRPMKIIKALNAHK-------------------- 584 (615)
T ss_dssp EEEECCCC------CCSCCEEEEEETT-----------SCEEEEESSCTTCCEEETTSST--------------------
T ss_pred EEEEcCccccccccccCCCEEEEEcCC-----------CcEEEEECCCCceechhhhcCc--------------------
Confidence 999999 99999999875 99999999998 8999999998
Q ss_pred ccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 347 NKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 347 ~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
..|++|+|+|||+ |+|++.|++|++|+.
T Consensus 585 --------------~~v~~l~~s~~~~-l~s~~~d~~v~iw~~ 612 (615)
T 1pgu_A 585 --------------DGVNNLLWETPST-LVSSGADACIKRWNV 612 (615)
T ss_dssp --------------TCEEEEEEEETTE-EEEEETTSCEEEEEE
T ss_pred --------------cceEEEEEcCCCC-eEEecCCceEEEEee
Confidence 5999999999999 999999999999983
No 31
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=9.3e-46 Score=362.15 Aligned_cols=278 Identities=12% Similarity=0.157 Sum_probs=242.5
Q ss_pred cccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 3 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
+..|.++.|+ +++||+++.||+|++||..++++..++..+. ..|.+++|+|+|+.|++ ++.| ..+++
T Consensus 64 ~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~-~~v~~~~~sp~g~~las----g~~d------~~i~v 132 (354)
T 2pbi_B 64 GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPC-TWVMACAYAPSGCAIAC----GGLD------NKCSV 132 (354)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS-SCCCEEEECTTSSEEEE----ESTT------SEEEE
T ss_pred CCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCC-CCEEEEEECCCCCEEEE----eeCC------CCEEE
Confidence 4579999999 8899999999999999999999999999875 89999999999999999 6678 78899
Q ss_pred eEeccCCCCCc-ceeEe-eecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEcC---Cc
Q 016446 81 EYIRRGKPDSG-FALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP---GI 153 (389)
Q Consensus 81 ~~i~~g~~~~~-~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS~---g~ 153 (389)
|++..++.... ..... ..+...+..++|+ |+++.|++++.|++|||||+++++++.++. ...|.+++|+| |.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 133 YPLTFDKNENMAAKKKSVAMHTNYLSACSFT-NSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN 211 (354)
T ss_dssp EECCCCTTCCSGGGCEEEEECSSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCC
T ss_pred EEEeccccccccccceeeeccCCcEEEEEEe-CCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCC
Confidence 98865432111 11111 2355667889998 899999999999999999999999998886 46899999984 57
Q ss_pred eEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccC--CCce
Q 016446 154 MLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTE--FMTP 231 (389)
Q Consensus 154 ~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh--~~~v 231 (389)
+|++++ .|++|++||+.+|++++++.+|...+..++|+ |++..+++++.|++|||||+++++++..+..+ ...+
T Consensus 212 ~l~sgs---~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~ 287 (354)
T 2pbi_B 212 TFVSGG---CDKKAMVWDMRSGQCVQAFETHESDVNSVRYY-PSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGA 287 (354)
T ss_dssp EEEEEE---TTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred EEEEEe---CCCeEEEEECCCCcEEEEecCCCCCeEEEEEe-CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccce
Confidence 888774 45899999999999999999999999999998 78899999999999999999999988877654 3578
Q ss_pred EEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEE
Q 016446 232 SAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSIN 309 (389)
Q Consensus 232 ~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIk 309 (389)
.+++|+|+|++|++++ |++|+|||+. |+++.+|.+|..+ |.+++|||||++|||||.| ++||
T Consensus 288 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~-----v~~l~~spdg~~l~sgs~D-----------~~v~ 351 (354)
T 2pbi_B 288 SSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENR-----VSTLRVSPDGTAFCSGSWD-----------HTLR 351 (354)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSC-----EEEEEECTTSSCEEEEETT-----------SEEE
T ss_pred eEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCc-----EEEEEECCCCCEEEEEcCC-----------CCEE
Confidence 9999999999999998 9999999996 9999999999987 8999999999999999875 9999
Q ss_pred EEe
Q 016446 310 VSS 312 (389)
Q Consensus 310 lWd 312 (389)
||+
T Consensus 352 vW~ 354 (354)
T 2pbi_B 352 VWA 354 (354)
T ss_dssp EEC
T ss_pred ecC
Confidence 996
No 32
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.5e-46 Score=369.11 Aligned_cols=280 Identities=12% Similarity=0.073 Sum_probs=224.1
Q ss_pred ccEEEEEee--ccEEEEEecCceEEEEeccc------------ceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCC
Q 016446 4 TKVIEIVAA--RDIVFALAHSGVCAAFSRET------------NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDN 69 (389)
Q Consensus 4 ~~v~~i~~~--~~~~a~~~~~gtiklW~~~t------------g~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d 69 (389)
..|..+.|+ |++||+++ |+++|+|+... +.+...+. + ...|.+|+|+||+. |++ ++.|
T Consensus 31 ~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~s~d~~-l~~----~s~d 102 (344)
T 4gqb_B 31 RQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQ-T-EAGVADLTWVGERG-ILV----ASDS 102 (344)
T ss_dssp SEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEE-E-SSCEEEEEEETTTE-EEE----EETT
T ss_pred CCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeec-c-CCCEEEEEEeCCCe-EEE----EECC
Confidence 458899999 88888887 88999997421 12222222 2 35799999999964 666 4577
Q ss_pred CcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEE
Q 016446 70 FSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEI 147 (389)
Q Consensus 70 ~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~v 147 (389)
..|+|||+.+|+..........+|...+.+|+|+ |||++||+|+.|++|||||+++++++.++. ...|.++
T Consensus 103 ------g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~s-pdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~ 175 (344)
T 4gqb_B 103 ------GAVELWELDENETLIVSKFCKYEHDDIVSTVSVL-SSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCV 175 (344)
T ss_dssp ------SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred ------CEEEEEeccCCCceeEeeccccCCCCCEEEEEEC-CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEE
Confidence 8999999999987432222223566678899998 899999999999999999999999999986 4689999
Q ss_pred EEc-CCc-eEEEEecCCCCeeEEEEEcCCCeEEEEEe--ecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEE
Q 016446 148 KIS-PGI-MLLIFNRSSSHVPLKILSIEDGTVLKVFY--HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEV 223 (389)
Q Consensus 148 afS-~g~-~la~~~~~s~d~tiklWd~~tG~~l~tl~--~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~ 223 (389)
+|+ ++. +|+++ +.|++|||||+++++++.++. .|...+..++|++.++..+++++.|++|+|||+++++++++
T Consensus 176 ~~~~~~~~~l~s~---s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~ 252 (344)
T 4gqb_B 176 AASPHKDSVFLSC---SEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLS 252 (344)
T ss_dssp EECSSCTTEEEEE---ETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEE
T ss_pred EecCCCCCceeee---ccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEE
Confidence 999 454 56665 456899999999999999885 44456789999854456777889999999999999999999
Q ss_pred cccCCCceEEEEEcCCC-cEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCC-EEEEEecCCCccc
Q 016446 224 SRTEFMTPSAFIFLYEN-QLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYCKAEPEDQ 299 (389)
Q Consensus 224 l~gh~~~v~sv~fspdg-~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~-~laS~s~D~~~~~ 299 (389)
+.+|...|++++|+|+| ++|||++ |++|+|||++ ++++ .+.+|... |++|+|||||+ +|+|+|.|
T Consensus 253 ~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~-----V~~v~~sp~~~~llas~s~D----- 321 (344)
T 4gqb_B 253 SAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDF-----VRDATWSPLNHSLLTTVGWD----- 321 (344)
T ss_dssp EECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSC-----EEEEEECSSSTTEEEEEETT-----
T ss_pred EcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCC-----EEEEEEeCCCCeEEEEEcCC-----
Confidence 99999999999999998 5799998 9999999997 7665 57899887 89999999997 56788764
Q ss_pred ccCCCCCeEEEEeCCCCeE
Q 016446 300 WMEGSAGSINVSSILTGKC 318 (389)
Q Consensus 300 ~~~s~D~tIklWd~~tg~~ 318 (389)
++|++|++.++..
T Consensus 322 ------~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 322 ------HQVVHHVVPTEPL 334 (344)
T ss_dssp ------SCEEEEECCC---
T ss_pred ------CeEEEEECCCCCC
Confidence 9999999987654
No 33
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-46 Score=413.02 Aligned_cols=346 Identities=10% Similarity=0.095 Sum_probs=268.8
Q ss_pred cccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 3 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
...|..+.|+ +++||+++.||+|+||+..+++++..+. |...|++|+|+| |++||++ +.| .+++|
T Consensus 17 ~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~--~~~~V~~l~fsp-g~~L~S~----s~D------~~v~l 83 (902)
T 2oaj_A 17 SSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE--DRSAIKEMRFVK-GIYLVVI----NAK------DTVYV 83 (902)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS--SCCCEEEEEEET-TTEEEEE----ETT------CEEEE
T ss_pred CCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC--CCCCEEEEEEcC-CCEEEEE----ECc------CeEEE
Confidence 3679999999 8999999999999999998888777654 347999999999 9999994 477 89999
Q ss_pred eEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEE-EEe------------cCCcEEEE
Q 016446 81 EYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML-YSI------------SDKHVQEI 147 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l-~tl------------~~~~V~~v 147 (389)
||+.+|++ +....+...+.+++|+ |+|++|++|+.|++|++||+.++++. +.+ |...|.+|
T Consensus 84 Wd~~~~~~-----~~~~~~~~~V~~v~~s-p~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl 157 (902)
T 2oaj_A 84 LSLYSQKV-----LTTVFVPGKITSIDTD-ASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSI 157 (902)
T ss_dssp EETTTCSE-----EEEEECSSCEEEEECC-TTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEE
T ss_pred EECCCCcE-----EEEEcCCCCEEEEEEC-CCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEE
Confidence 99998876 2222344567889998 99999999999999999999998864 222 23689999
Q ss_pred EEcCC--ceEEEEecCCCCeeEEEEEcCCCeEEEEEeec------------------CCceeEEEEEecCCCeEEEEeCC
Q 016446 148 KISPG--IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHL------------------LHRNKKVDFIEQFNEKLLVKQEN 207 (389)
Q Consensus 148 afS~g--~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~------------------~~~~~~v~f~~~~~~~l~~~s~D 207 (389)
+|+|. .+|+++ +.|++| |||++++++++++.+| ...+.+|+|+ |++.+|++++.|
T Consensus 158 ~~sp~~~~~l~~g---~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fs-pdg~~lasgs~D 232 (902)
T 2oaj_A 158 QWNPRDIGTVLIS---YEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYH-PNSLHIITIHED 232 (902)
T ss_dssp EEETTEEEEEEEE---CSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEEC-TTSSEEEEEETT
T ss_pred EEccCCCCEEEEE---eCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEc-CCCCEEEEEECC
Confidence 99973 577765 456899 9999999999999866 4669999998 788999999999
Q ss_pred CcEEEEECCCCeEEEE--c---cc-------------CCCceEEEEEc----CCC-cEEEEEc-C-----CeEEEEe---
Q 016446 208 ENLQILDVRNAELMEV--S---RT-------------EFMTPSAFIFL----YEN-QLFLTFR-N-----RTVAVWN--- 255 (389)
Q Consensus 208 ~tIklWd~~tg~~~~~--l---~g-------------h~~~v~sv~fs----pdg-~~laS~s-D-----~tIklWd--- 255 (389)
++|+|||+++|+++.. + .+ |...|++++|+ ||+ ++|++++ | +++++|+
T Consensus 233 g~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~ 312 (902)
T 2oaj_A 233 NSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGY 312 (902)
T ss_dssp CCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEE
T ss_pred CeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCC
Confidence 9999999999998764 3 12 34579999994 543 5666664 3 1444444
Q ss_pred --------------------------------------------------------------------CC-CcEEEE---
Q 016446 256 --------------------------------------------------------------------FR-GELVTS--- 263 (389)
Q Consensus 256 --------------------------------------------------------------------~~-G~~l~t--- 263 (389)
+. |.....
T Consensus 313 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~ 392 (902)
T 2oaj_A 313 TPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASL 392 (902)
T ss_dssp CCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGG
T ss_pred CCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCccccccc
Confidence 32 321110
Q ss_pred --------------------------------------eccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCC
Q 016446 264 --------------------------------------FEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSA 305 (389)
Q Consensus 264 --------------------------------------l~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D 305 (389)
|+||... |++|+|||||++||||+.|
T Consensus 393 ~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~-----v~sv~~spdg~~laSgs~D----------- 456 (902)
T 2oaj_A 393 FPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRT-----KRQKLPAEYGTAFITGHSN----------- 456 (902)
T ss_dssp SCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCC-----CCCCCCCSEEEEEEEEETT-----------
T ss_pred CCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCC-----CCcccccccCcEEEEecCC-----------
Confidence 2233322 4567889999999999875
Q ss_pred CeEEEEeCCCCeEE--EE----ec-----CCCCCCCcccccCCCCCCCccccccccceecc-------------------
Q 016446 306 GSINVSSILTGKCL--AK----IN-----ATNCSPKVDDELGSSSTGKSKKLNKSSYIRST------------------- 355 (389)
Q Consensus 306 ~tIklWd~~tg~~l--~t----l~-----gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 355 (389)
++|||||+.+|++. .. +. +|+..+....+++++...++...+++.++|..
T Consensus 457 gtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~ 536 (902)
T 2oaj_A 457 GSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEM 536 (902)
T ss_dssp SEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC--------------
T ss_pred CcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccce
Confidence 99999999988532 11 22 88877777788888876666666665555543
Q ss_pred ----------------------------------cccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 356 ----------------------------------VGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 356 ----------------------------------~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
+.+|...|++|+||||| +||+|+.|++|||||.
T Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~ 603 (902)
T 2oaj_A 537 NFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDR 603 (902)
T ss_dssp -CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEET
T ss_pred eeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEEC
Confidence 44578899999999999 9999999999999983
No 34
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1e-46 Score=371.35 Aligned_cols=283 Identities=11% Similarity=0.146 Sum_probs=241.4
Q ss_pred cccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 3 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
...|..+.|+ +++||+++.||+|++||..+++++.++.+|. ..|.+++|+|+|+.||+ ++.| ..+++
T Consensus 66 ~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~-~~v~~~~~s~~g~~las----~~~d------~~v~i 134 (380)
T 3iz6_a 66 SGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHC-PWVMECAFAPNGQSVAC----GGLD------SACSI 134 (380)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCC-TTCCCCEECTTSSEEEE----CCSS------SCCEE
T ss_pred ccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCC-CCEEEEEECCCCCEEEE----eeCC------CcEEE
Confidence 3579999999 8899999999999999999999999999875 89999999999999999 6788 88899
Q ss_pred eEeccCCCCC----cceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEe-------cCCcEEEEEE
Q 016446 81 EYIRRGKPDS----GFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-------SDKHVQEIKI 149 (389)
Q Consensus 81 ~~i~~g~~~~----~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl-------~~~~V~~vaf 149 (389)
|++..+.... ....+ ..+.+.+.+++|+|.++..|++|+.|++||+||+.+++++..+ |...|.+++|
T Consensus 135 w~~~~~~~~~~~~~~~~~~-~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~ 213 (380)
T 3iz6_a 135 FNLSSQADRDGNMPVSRVL-TGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSI 213 (380)
T ss_dssp EECCCCSSCCCSSTTCCBC-CCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEE
T ss_pred EECCCCccccCCccceeec-cCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEe
Confidence 9986543210 01111 2355566789998444678999999999999999999998777 2358999999
Q ss_pred c--CCceEEEEecCCCCeeEEEEEcC-CCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEccc
Q 016446 150 S--PGIMLLIFNRSSSHVPLKILSIE-DGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT 226 (389)
Q Consensus 150 S--~g~~la~~~~~s~d~tiklWd~~-tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~g 226 (389)
+ ++.+|+++ +.|++|||||++ ++++++++.+|.+.+.+|+|+ |++..+++++.|++|||||++++++++++..
T Consensus 214 ~~~~~~~l~sg---s~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 289 (380)
T 3iz6_a 214 NSLNANMFISG---SCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFF-PDGQRFGTGSDDGTCRLFDMRTGHQLQVYNR 289 (380)
T ss_dssp CSSSCCEEEEE---ETTSCEEEEETTTTCCCCEEECCCSSCCCEEEEC-TTSSEEEEECSSSCEEEEETTTTEEEEEECC
T ss_pred ecCCCCEEEEE---ECCCeEEEEECCCCCcceEEECCcCCCeEEEEEe-cCCCeEEEEcCCCeEEEEECCCCcEEEEecc
Confidence 8 37788776 456899999998 678999999999999999998 7889999999999999999999999998876
Q ss_pred CCC-------ceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEe----ccCcCCcCCCCeeEEEECCCCCEEEEEec
Q 016446 227 EFM-------TPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSF----EDHLLWHPDCNTNNIYITSDQDLIISYCK 293 (389)
Q Consensus 227 h~~-------~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl----~gh~~~~~~~~v~sv~fSpdG~~laS~s~ 293 (389)
|.. .|.+++|+|+|++|++++ |++|++||.. ++++.++ .+|... |.+++|||||++|||||.
T Consensus 290 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~-----v~~l~~s~dg~~l~sgs~ 364 (380)
T 3iz6_a 290 EPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGR-----ISCLGLSSDGSALCTGSW 364 (380)
T ss_dssp CCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCC-----CCEEEECSSSSEEEEECT
T ss_pred cccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCc-----eEEEEECCCCCEEEEeeC
Confidence 543 489999999999999998 9999999996 9998888 678776 799999999999999976
Q ss_pred CCCcccccCCCCCeEEEEeCCCCe
Q 016446 294 AEPEDQWMEGSAGSINVSSILTGK 317 (389)
Q Consensus 294 D~~~~~~~~s~D~tIklWd~~tg~ 317 (389)
| ++||||++..++
T Consensus 365 D-----------~~i~iW~~~~~~ 377 (380)
T 3iz6_a 365 D-----------KNLKIWAFSGHR 377 (380)
T ss_dssp T-----------SCEEEEECCSSS
T ss_pred C-----------CCEEEEecCCCc
Confidence 5 999999987554
No 35
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.3e-46 Score=368.89 Aligned_cols=285 Identities=10% Similarity=0.085 Sum_probs=219.8
Q ss_pred ceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe---ee---cccCceeEEEecCCCeEEEE
Q 016446 45 EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE---SE---SLKWPGFVEFDDVNGKVLTY 118 (389)
Q Consensus 45 ~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~---~~---~~~~~~~v~Fs~pdG~~Las 118 (389)
-+|++|+|+|||+.||+++.+.+. ++++ ..++||++..+.......+.. .. +...+.+++|+ +..+++
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~--sGi~-N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~---~~~~~~ 88 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGN--NGIP-NKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS---KGIILV 88 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSS--SSCC-EEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE---TTEEEE
T ss_pred CCEEEEEEeCCCcEEEEECCCccc--cCCC-CEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC---CCEEEE
Confidence 479999999999999996532211 1111 578999987665421111111 11 22234456554 445544
Q ss_pred -----------ecCCCeEEEEeCCCCeE-E---EEec-------CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCC
Q 016446 119 -----------SAQDSIYKVFDLKNYTM-L---YSIS-------DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDG 175 (389)
Q Consensus 119 -----------~s~D~tiklWdl~~g~~-l---~tl~-------~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG 175 (389)
++.|+++|+|++.+++. + .... ...|+.|+|| ||++||+++ ++.|++|||||++++
T Consensus 89 g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as-~~~d~~i~iwd~~~~ 167 (365)
T 4h5i_A 89 GCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIAS-SKVPAIMRIIDPSDL 167 (365)
T ss_dssp ECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEE-SCSSCEEEEEETTTT
T ss_pred EECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEE-CCCCCEEEEeECCCC
Confidence 45789999999876542 2 2221 2469999999 588887654 567899999999999
Q ss_pred eEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEE--EcccCCCceEEEEEcCCCcEEEEEc-CC---
Q 016446 176 TVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELME--VSRTEFMTPSAFIFLYENQLFLTFR-NR--- 249 (389)
Q Consensus 176 ~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~--~l~gh~~~v~sv~fspdg~~laS~s-D~--- 249 (389)
+++.++. |.+.|.+|+|+ |++.++++++ |.++++|+..+++++. ++.+|...|.+|+|+|||+++++++ |+
T Consensus 168 ~~~~~~~-~~~~V~~v~fs-pdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~ 244 (365)
T 4h5i_A 168 TEKFEIE-TRGEVKDLHFS-TDGKVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKG 244 (365)
T ss_dssp EEEEEEE-CSSCCCEEEEC-TTSSEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCC
T ss_pred cEEEEeC-CCCceEEEEEc-cCCceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcce
Confidence 9999997 66889999998 7777777776 5567778777887653 4678999999999999999999998 87
Q ss_pred -eEEEEeCC-CcE----EEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEE-e
Q 016446 250 -TVAVWNFR-GEL----VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAK-I 322 (389)
Q Consensus 250 -tIklWd~~-G~~----l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~t-l 322 (389)
++++|++. ++. .+.+.+|..+ |.+++|||||++||+|+.| ++|||||+++|+++.+ +
T Consensus 245 ~~i~~~~~~~~~~~~~~~~~~~~~~~~-----V~~~~~Spdg~~lasgs~D-----------~~V~iwd~~~~~~~~~~~ 308 (365)
T 4h5i_A 245 IVLTKISIKSGNTSVLRSKQVTNRFKG-----ITSMDVDMKGELAVLASND-----------NSIALVKLKDLSMSKIFK 308 (365)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESSCSC-----EEEEEECTTSCEEEEEETT-----------SCEEEEETTTTEEEEEET
T ss_pred eEEeecccccceecceeeeeecCCCCC-----eEeEEECCCCCceEEEcCC-----------CEEEEEECCCCcEEEEec
Confidence 78999985 432 4678888876 8999999999999999875 9999999999999988 4
Q ss_pred cCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 323 NATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 323 ~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
++|+ ..|++|+|||||++|||||.|+|||||+.
T Consensus 309 ~gH~----------------------------------~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 309 QAHS----------------------------------FAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp TSSS----------------------------------SCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred Cccc----------------------------------CCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 8998 59999999999999999999999999984
No 36
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3e-45 Score=352.58 Aligned_cols=282 Identities=8% Similarity=0.109 Sum_probs=237.5
Q ss_pred cccEEEEEee---ccEEEEEecCceEEEEeccc-----ceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCccee
Q 016446 3 RTKVIEIVAA---RDIVFALAHSGVCAAFSRET-----NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLK 74 (389)
Q Consensus 3 ~~~v~~i~~~---~~~~a~~~~~gtiklW~~~t-----g~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~ 74 (389)
...|..|.|+ +++||+++.|++|++|++.+ +.+++++.+|. ..|.+++|+|||+.|++ ++.|
T Consensus 17 ~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~-~~v~~~~~s~dg~~l~s----~s~D----- 86 (319)
T 3frx_A 17 NGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHS-HIVQDCTLTADGAYALS----ASWD----- 86 (319)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCS-SCEEEEEECTTSSEEEE----EETT-----
T ss_pred cceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCc-ccEEEEEECCCCCEEEE----EeCC-----
Confidence 3578999997 37999999999999999853 56788999875 89999999999999999 4577
Q ss_pred eeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEcCC
Q 016446 75 CRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPG 152 (389)
Q Consensus 75 ~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS~g 152 (389)
.+++|||+.+|++. ..+ ..+...+.+++|+ |+|++|++|+.|++|||||+ .++++.++. ...|.+++|+|.
T Consensus 87 -~~v~~wd~~~~~~~--~~~--~~h~~~v~~~~~~-~~~~~l~s~s~D~~i~vwd~-~~~~~~~~~~h~~~v~~~~~~~~ 159 (319)
T 3frx_A 87 -KTLRLWDVATGETY--QRF--VGHKSDVMSVDID-KKASMIISGSRDKTIKVWTI-KGQCLATLLGHNDWVSQVRVVPN 159 (319)
T ss_dssp -SEEEEEETTTTEEE--EEE--ECCSSCEEEEEEC-TTSCEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECCC
T ss_pred -CEEEEEECCCCCee--EEE--ccCCCcEEEEEEc-CCCCEEEEEeCCCeEEEEEC-CCCeEEEEeccCCcEEEEEEccC
Confidence 89999999998751 222 2455667889998 89999999999999999998 467777775 468999999963
Q ss_pred -------ceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcc
Q 016446 153 -------IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR 225 (389)
Q Consensus 153 -------~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~ 225 (389)
.+|+++ +.|++|++||+.++++..++.+|...+..++|+ |++.+|++++.|++|+|||+.+++++.++.
T Consensus 160 ~~~~~~~~~l~s~---~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~s-p~g~~l~s~~~dg~i~iwd~~~~~~~~~~~ 235 (319)
T 3frx_A 160 EKADDDSVTIISA---GNDKMVKAWNLNQFQIEADFIGHNSNINTLTAS-PDGTLIASAGKDGEIMLWNLAAKKAMYTLS 235 (319)
T ss_dssp ------CCEEEEE---ETTSCEEEEETTTTEEEEEECCCCSCEEEEEEC-TTSSEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred CCCCCCccEEEEE---eCCCEEEEEECCcchhheeecCCCCcEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 267766 456899999999999999999999999999998 788999999999999999999999999988
Q ss_pred cCCCceEEEEEcCCCcEEEEEcCCeEEEEeCC-CcEEEEeccCcCCc---CCCCeeEEEECCCCCEEEEEecCCCccccc
Q 016446 226 TEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWH---PDCNTNNIYITSDQDLIISYCKAEPEDQWM 301 (389)
Q Consensus 226 gh~~~v~sv~fspdg~~laS~sD~tIklWd~~-G~~l~tl~gh~~~~---~~~~v~sv~fSpdG~~laS~s~D~~~~~~~ 301 (389)
.| ..|.+++|+|+|++|+++.+..|++|+++ +.++..+..+.... ....|.+++|||||++||+|+.|
T Consensus 236 ~~-~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~D------- 307 (319)
T 3frx_A 236 AQ-DEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTD------- 307 (319)
T ss_dssp CC-SCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETT-------
T ss_pred CC-CcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecC-------
Confidence 66 58999999999999999988889999997 77777776432110 01127899999999999999875
Q ss_pred CCCCCeEEEEeCCCCe
Q 016446 302 EGSAGSINVSSILTGK 317 (389)
Q Consensus 302 ~s~D~tIklWd~~tg~ 317 (389)
++|||||+.|++
T Consensus 308 ----g~i~vWd~~t~~ 319 (319)
T 3frx_A 308 ----NVIRVWQVMTAN 319 (319)
T ss_dssp ----SCEEEEEEEEC-
T ss_pred ----ceEEEEEEeecC
Confidence 999999987753
No 37
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-47 Score=375.57 Aligned_cols=332 Identities=14% Similarity=0.079 Sum_probs=252.3
Q ss_pred EEecccceeeeeeecCCcceEEEEEEee-CCCEEEEEEEeecCCCcceeeeeeeEeEecc---CCCCCcceeEeeecccC
Q 016446 27 AFSRETNRRICFLNVSPDEVIRSLFYNK-NNDSLITVSVYASDNFSSLKCRSTKIEYIRR---GKPDSGFALFESESLKW 102 (389)
Q Consensus 27 lW~~~tg~~l~tl~~~~~~~v~sv~~sp-dg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~---g~~~~~~~l~~~~~~~~ 102 (389)
.|+. +|+++.++..+|.+.|++|+|+| +|+.||+ ++.| ..++||++.. +..... .....+...
T Consensus 47 ~w~~-~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s----~s~d------g~v~vwd~~~~~~~~~~~~--~~~~~h~~~ 113 (437)
T 3gre_A 47 MGNL-RGKLIATLMENEPNSITSSAVSPGETPYLIT----GSDQ------GVIKIWNLKEIIVGEVYSS--SLTYDCSST 113 (437)
T ss_dssp GGGC-CCCEEEEECTTTTSCEEEEEEECSSSCEEEE----EETT------SEEEEEEHHHHHTTCCCSC--SEEEECSSC
T ss_pred cccc-cceEEeeeccCCCCceEEEEECCCCCCEEEE----ecCC------ceEEEeECcccccCcccce--eeeccCCCC
Confidence 5987 59999999555569999999999 9999999 4577 8999999977 553211 222235667
Q ss_pred ceeEEEecCCCeEEEEecCCCeEEEEeCC---CCeEEEEecCCcEEEEEEc-----------------CCceEEEEecCC
Q 016446 103 PGFVEFDDVNGKVLTYSAQDSIYKVFDLK---NYTMLYSISDKHVQEIKIS-----------------PGIMLLIFNRSS 162 (389)
Q Consensus 103 ~~~v~Fs~pdG~~Las~s~D~tiklWdl~---~g~~l~tl~~~~V~~vafS-----------------~g~~la~~~~~s 162 (389)
+.+++|+ |++++|++|+.|++|+|||+. +++++..+..+.|..++|+ ++.+|++++
T Consensus 114 v~~~~~~-~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--- 189 (437)
T 3gre_A 114 VTQITMI-PNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT--- 189 (437)
T ss_dssp EEEEEEC-TTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE---
T ss_pred EEEEEEe-CCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe---
Confidence 8899998 899999999999999999994 6777665554455555544 378888774
Q ss_pred CCeeEEEEEcCCCeEEEEEee--cCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcc-cCCCceEEEEE---
Q 016446 163 SHVPLKILSIEDGTVLKVFYH--LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR-TEFMTPSAFIF--- 236 (389)
Q Consensus 163 ~d~tiklWd~~tG~~l~tl~~--~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~-gh~~~v~sv~f--- 236 (389)
.|++|++||+++++++.++.+ |.+.+..++|+ |++..+++++.|++|+|||++++++++++. +|...|.+++|
T Consensus 190 ~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 190 NLSRVIIFDIRTLERLQIIENSPRHGAVSSICID-EECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF 268 (437)
T ss_dssp TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEEC-TTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEEC-CCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccc
Confidence 458999999999999999998 88999999998 778899999999999999999999999886 88889999954
Q ss_pred -cCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcC---------------------CCCeeEEEECCCCCEEEEEe
Q 016446 237 -LYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHP---------------------DCNTNNIYITSDQDLIISYC 292 (389)
Q Consensus 237 -spdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~---------------------~~~v~sv~fSpdG~~laS~s 292 (389)
+|++++|++++ |++|+|||++ |++++++.+|...+. ...|++++|+ ++++|++|+
T Consensus 269 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~ 347 (437)
T 3gre_A 269 YGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDE 347 (437)
T ss_dssp TCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEG
T ss_pred cCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecC
Confidence 56899999999 9999999997 999999998753211 1127889999 889999987
Q ss_pred cCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCccccc--CCCCCCCccccc-cccceecccccccCCEEEEEEC
Q 016446 293 KAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDEL--GSSSTGKSKKLN-KSSYIRSTVGEALEDITSLFYD 369 (389)
Q Consensus 293 ~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~V~svafS 369 (389)
.| ++|++||+.+++++.++.+|.......... .........+.+ ...........|.+.|++|+|+
T Consensus 348 ~d-----------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~ 416 (437)
T 3gre_A 348 AT-----------SSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTC 416 (437)
T ss_dssp GG-----------TEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEE
T ss_pred CC-----------CeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeee
Confidence 65 999999999999999999986321000000 000000000000 0011112334477899999999
Q ss_pred CC--CCEEEEecCCCcEEEcc
Q 016446 370 EE--RNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 370 pd--g~~LaSgs~D~tIrlW~ 388 (389)
|+ +.+|+||+.||+|+||+
T Consensus 417 ~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 417 EVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ESSSSEEEEEEETTSCEEEEC
T ss_pred ccCCceEEEEEcCCceEEEeC
Confidence 99 88999999999999996
No 38
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.9e-46 Score=366.66 Aligned_cols=281 Identities=11% Similarity=0.109 Sum_probs=223.1
Q ss_pred ccEEEEEee--ccEEEEEec------CceEEEEecccceeee----eeecCCcceEEEEEEeeCCCEEEEEEEeecCCCc
Q 016446 4 TKVIEIVAA--RDIVFALAH------SGVCAAFSRETNRRIC----FLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFS 71 (389)
Q Consensus 4 ~~v~~i~~~--~~~~a~~~~------~gtiklW~~~tg~~l~----tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~ 71 (389)
..|..|.|+ |++||+++. |+++++|+..+|.... ...+| ...|.+|+|+|+++.|+. +.|
T Consensus 43 ~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~-~~~V~~~~~s~d~~~l~~-----s~d-- 114 (357)
T 4g56_B 43 VQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQT-EAGVTDVAWVSEKGILVA-----SDS-- 114 (357)
T ss_dssp SEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEEC-SSCEEEEEEETTTEEEEE-----ETT--
T ss_pred CCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCC-CCCEEEEEEcCCCCEEEE-----ECC--
Confidence 468999999 999999997 7889999987776433 33444 478999999999975543 356
Q ss_pred ceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEE
Q 016446 72 SLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKI 149 (389)
Q Consensus 72 ~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vaf 149 (389)
.+|+|||+.+|+.......-..++...+.+|+|+ |||++||+|+.|++|||||+++++++..+. ...|.+|+|
T Consensus 115 ----g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~s-pdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~ 189 (357)
T 4g56_B 115 ----GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVF-SDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAA 189 (357)
T ss_dssp ----SCEEEC--------CCCCEEECCCSSCEEEEEEC-SSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred ----CEEEEeeccccceeEEEeeccCCCCCCEEEEEEC-CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 6899999998876433332223455667889998 899999999999999999999999998886 468999999
Q ss_pred cC-Cc-eEEEEecCCCCeeEEEEEcCCCeEEEEEe--ecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcc
Q 016446 150 SP-GI-MLLIFNRSSSHVPLKILSIEDGTVLKVFY--HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR 225 (389)
Q Consensus 150 S~-g~-~la~~~~~s~d~tiklWd~~tG~~l~tl~--~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~ 225 (389)
+| +. +++++ +.|++|+|||+++++++..+. .|...+.+|+|+|..+..+++++.|++|+|||++++++++++.
T Consensus 190 s~~~~~~~~s~---~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~ 266 (357)
T 4g56_B 190 CPGKDTIFLSC---GEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA 266 (357)
T ss_dssp CTTCSSCEEEE---ETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC
T ss_pred ccCCCceeeee---ccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe
Confidence 94 44 66665 446899999999999988765 3455679999984334567778999999999999999999999
Q ss_pred cCCCceEEEEEcCCC-cEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECC-CCCEEEEEecCCCccccc
Q 016446 226 TEFMTPSAFIFLYEN-QLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITS-DQDLIISYCKAEPEDQWM 301 (389)
Q Consensus 226 gh~~~v~sv~fspdg-~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSp-dG~~laS~s~D~~~~~~~ 301 (389)
+|...|++++|+|++ ++|||++ |++|+|||++ |++++++ +|..+ |++|+||| ||++|||+|.|
T Consensus 267 ~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~-----V~~vafsP~d~~~l~s~s~D------- 333 (357)
T 4g56_B 267 VHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDF-----VTGVAWSPLDHSKFTTVGWD------- 333 (357)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSC-----EEEEEECSSSTTEEEEEETT-------
T ss_pred ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCC-----EEEEEEeCCCCCEEEEEcCC-------
Confidence 999999999999987 6799998 9999999997 8888766 79876 89999999 89999999875
Q ss_pred CCCCCeEEEEeCCCCe
Q 016446 302 EGSAGSINVSSILTGK 317 (389)
Q Consensus 302 ~s~D~tIklWd~~tg~ 317 (389)
++|++||+.+..
T Consensus 334 ----g~v~iW~~~~~~ 345 (357)
T 4g56_B 334 ----HKVLHHHLPSEG 345 (357)
T ss_dssp ----SCEEEEECC---
T ss_pred ----CeEEEEECCCCC
Confidence 999999997643
No 39
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.9e-45 Score=350.60 Aligned_cols=281 Identities=12% Similarity=0.079 Sum_probs=220.5
Q ss_pred cccEEEEEeeccEEEEEecCceEEEEecccc--eeeeee-ecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeee
Q 016446 3 RTKVIEIVAARDIVFALAHSGVCAAFSRETN--RRICFL-NVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 79 (389)
Q Consensus 3 ~~~v~~i~~~~~~~a~~~~~gtiklW~~~tg--~~l~tl-~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~ 79 (389)
+..|..+.|+.++||+++.|++||||++.++ +++.++ .+.|...|++|+|+|+|+.||+ ++.| .+++
T Consensus 14 ~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las----~s~D------~~v~ 83 (330)
T 2hes_X 14 KEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAA----GSFD------STVS 83 (330)
T ss_dssp SSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEE----EETT------SCEE
T ss_pred CCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEE----EeCC------CcEE
Confidence 4579999999889999999999999999765 567777 3435689999999999999999 4577 7889
Q ss_pred EeEeccCCCC--CcceeEe-eecccCceeEEEecCCCeEEEEecCCCeEEEEeCC-C---CeEEEEec--CCcEEEEEEc
Q 016446 80 IEYIRRGKPD--SGFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK-N---YTMLYSIS--DKHVQEIKIS 150 (389)
Q Consensus 80 l~~i~~g~~~--~~~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~-~---g~~l~tl~--~~~V~~vafS 150 (389)
||++..+... ....+.. ..+...+.+|+|+ |||++||+|+.|++|+|||+. . .+++.++. ...|.+|+|+
T Consensus 84 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s-p~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 84 IWAKEESADRTFEMDLLAIIEGHENEVKGVAWS-NDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp EEEC-------CCCEEEEEEC----CEEEEEEC-TTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEEC
T ss_pred EEEcccCcCccccceeEEEEcCCCCcEEEEEEC-CCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEEC
Confidence 9998543211 0111211 2355567889998 899999999999999999994 2 35677775 4689999999
Q ss_pred -CCceEEEEecCCCCeeEEEEEcCCC--eEEEEEeecCCceeEEEEEecC--CCeEEEEeCCCcEEEEECCCC-------
Q 016446 151 -PGIMLLIFNRSSSHVPLKILSIEDG--TVLKVFYHLLHRNKKVDFIEQF--NEKLLVKQENENLQILDVRNA------- 218 (389)
Q Consensus 151 -~g~~la~~~~~s~d~tiklWd~~tG--~~l~tl~~~~~~~~~v~f~~~~--~~~l~~~s~D~tIklWd~~tg------- 218 (389)
++.+||+++ .|++|||||+.++ +++.++.+|.+.++.++|+ |+ +..+++++.|++|||||+.++
T Consensus 163 p~~~~l~s~s---~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~ 238 (330)
T 2hes_X 163 PSEALLASSS---YDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFD-KTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQE 238 (330)
T ss_dssp SSSSEEEEEE---TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC-CSSSSCEEEEEETTSCEEEEEEEEECTTSCEE
T ss_pred CCCCEEEEEc---CCCeEEEEECCCCCeeEEEEccCCCCcEEEEEec-CCCCeeEEEEEeCCCeEEEEEecCCCccccce
Confidence 478888764 4589999999887 7999999999999999998 55 457888999999999999876
Q ss_pred -eEEEEccc-CCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-Cc--EEEE-eccCcC-CcCCCCeeEEEECC--CCCEE
Q 016446 219 -ELMEVSRT-EFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GE--LVTS-FEDHLL-WHPDCNTNNIYITS--DQDLI 288 (389)
Q Consensus 219 -~~~~~l~g-h~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~--~l~t-l~gh~~-~~~~~~v~sv~fSp--dG~~l 288 (389)
++..++.+ |...|++++|+|++ +||+++ |++|+|||.. |+ ++.. +.+|.. . |++++|+| ||++|
T Consensus 239 ~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~-----v~~v~~~~~~~~~~l 312 (330)
T 2hes_X 239 WVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYE-----INVVKWLELNGKTIL 312 (330)
T ss_dssp EEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSC-----EEEEEEC-----CCE
T ss_pred eEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccce-----EEEEEEecCCCceEE
Confidence 57777776 99999999999877 677887 9999999996 63 3433 467875 4 89999999 89999
Q ss_pred EEEecCCCcccccCCCCCeEEEEeCCC
Q 016446 289 ISYCKAEPEDQWMEGSAGSINVSSILT 315 (389)
Q Consensus 289 aS~s~D~~~~~~~~s~D~tIklWd~~t 315 (389)
||||.| |+|||||+++
T Consensus 313 as~s~D-----------g~v~~W~~~~ 328 (330)
T 2hes_X 313 ATGGDD-----------GIVNFWSLEK 328 (330)
T ss_dssp EEEETT-----------SEEEEEEC--
T ss_pred EEecCC-----------CcEEEEEecc
Confidence 999875 9999999864
No 40
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1e-44 Score=358.56 Aligned_cols=277 Identities=12% Similarity=0.132 Sum_probs=238.0
Q ss_pred cccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCc-----------------ceEEEEEEeeCCCEEEEEE
Q 016446 3 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPD-----------------EVIRSLFYNKNNDSLITVS 63 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~-----------------~~v~sv~~spdg~~l~s~s 63 (389)
.+.|.+|.|+ |++||+++ ++++++|+..+|+++..+..+.. ..|++|+|+|||+.|++
T Consensus 64 ~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s-- 140 (393)
T 1erj_A 64 TSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT-- 140 (393)
T ss_dssp SSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE--
T ss_pred CCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE--
Confidence 3568899999 89999987 78999999999999999876531 24999999999999999
Q ss_pred EeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec-CC
Q 016446 64 VYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DK 142 (389)
Q Consensus 64 ~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~-~~ 142 (389)
++.| ..++|||+.++++. ..+ ..+...+.+++|+ |+|++|++++.|++||+||+.++++..++. ..
T Consensus 141 --~~~d------~~i~iwd~~~~~~~---~~~-~~h~~~v~~~~~~-p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~ 207 (393)
T 1erj_A 141 --GAED------RLIRIWDIENRKIV---MIL-QGHEQDIYSLDYF-PSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIED 207 (393)
T ss_dssp --EETT------SCEEEEETTTTEEE---EEE-CCCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEECSS
T ss_pred --EcCC------CeEEEEECCCCcEE---EEE-ccCCCCEEEEEEc-CCCCEEEEecCCCcEEEEECCCCeeEEEEEcCC
Confidence 4577 89999999888651 112 2455567889998 899999999999999999999999988876 57
Q ss_pred cEEEEEEcC--CceEEEEecCCCCeeEEEEEcCCCeEEEEE-------eecCCceeEEEEEecCCCeEEEEeCCCcEEEE
Q 016446 143 HVQEIKISP--GIMLLIFNRSSSHVPLKILSIEDGTVLKVF-------YHLLHRNKKVDFIEQFNEKLLVKQENENLQIL 213 (389)
Q Consensus 143 ~V~~vafS~--g~~la~~~~~s~d~tiklWd~~tG~~l~tl-------~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklW 213 (389)
.|.+++|+| |.+||+++ .|++|++||+++|+++..+ .+|...+.+++|+ |++..|++++.|++|+||
T Consensus 208 ~v~~~~~~~~~~~~l~~~s---~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~-~~g~~l~s~s~d~~v~~w 283 (393)
T 1erj_A 208 GVTTVAVSPGDGKYIAAGS---LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT-RDGQSVVSGSLDRSVKLW 283 (393)
T ss_dssp CEEEEEECSTTCCEEEEEE---TTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEEC-TTSSEEEEEETTSEEEEE
T ss_pred CcEEEEEECCCCCEEEEEc---CCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEEC-CCCCEEEEEeCCCEEEEE
Confidence 899999995 67888764 4589999999999999888 5788899999998 788999999999999999
Q ss_pred ECCC------------CeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEE
Q 016446 214 DVRN------------AELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNI 279 (389)
Q Consensus 214 d~~t------------g~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv 279 (389)
|+++ +.|..++.+|...|.+++|+|++++|+|++ |++|++||+. |+++.+|++|... |.++
T Consensus 284 d~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~-----v~~v 358 (393)
T 1erj_A 284 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNS-----VISV 358 (393)
T ss_dssp EC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSC-----EEEE
T ss_pred ECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCC-----EEEE
Confidence 9976 457778899999999999999999999999 9999999997 9999999999987 8999
Q ss_pred EECC------CCCEEEEEecCCCcccccCCCCCeEEEEeCCC
Q 016446 280 YITS------DQDLIISYCKAEPEDQWMEGSAGSINVSSILT 315 (389)
Q Consensus 280 ~fSp------dG~~laS~s~D~~~~~~~~s~D~tIklWd~~t 315 (389)
+|+| ++++|||||.| ++|||||+..
T Consensus 359 ~~~~~~~~~p~~~~l~sgs~D-----------g~i~iW~~~~ 389 (393)
T 1erj_A 359 AVANGSSLGPEYNVFATGSGD-----------CKARIWKYKK 389 (393)
T ss_dssp EECSSCTTCTTCEEEEEEETT-----------SEEEEEEEEE
T ss_pred EecCCcCcCCCCCEEEEECCC-----------CcEEECcccc
Confidence 9986 79999999875 9999999753
No 41
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-44 Score=351.05 Aligned_cols=284 Identities=11% Similarity=0.062 Sum_probs=229.1
Q ss_pred cEEEEEee--ccEEEEEecCceEEEEecccceeee--eeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 5 KVIEIVAA--RDIVFALAHSGVCAAFSRETNRRIC--FLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 5 ~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~--tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
.|..+.|+ +++||+++.|++||||+.++++.++ .+...|...|++|+|+|+|++||++ +.| ..++|
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~----s~D------~~v~i 87 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASA----SFD------ATTCI 87 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEE----ETT------SCEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEE----ECC------CcEEE
Confidence 78899998 9999999999999999998776543 3333455899999999999999994 577 78899
Q ss_pred eEeccCCCCCcceeEe-eecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCe---EEEEec--CCcEEEEEEc-CCc
Q 016446 81 EYIRRGKPDSGFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT---MLYSIS--DKHVQEIKIS-PGI 153 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~---~l~tl~--~~~V~~vafS-~g~ 153 (389)
|++..++. ..+.. ..+...+.+|+|+ |+|++||+|+.|++|++||+.+++ ++..+. ...|.+++|+ ++.
T Consensus 88 w~~~~~~~---~~~~~~~~h~~~v~~v~~s-p~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 88 WKKNQDDF---ECVTTLEGHENEVKSVAWA-PSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp EEECCC-E---EEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred EEccCCCe---EEEEEccCCCCCceEEEEe-CCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence 99877653 11222 2355567889998 899999999999999999998764 455664 4689999999 588
Q ss_pred eEEEEecCCCCeeEEEEEcCCCe--EEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCC--------------
Q 016446 154 MLLIFNRSSSHVPLKILSIEDGT--VLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRN-------------- 217 (389)
Q Consensus 154 ~la~~~~~s~d~tiklWd~~tG~--~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~t-------------- 217 (389)
+||+++ .|++|+|||+.+++ ++.++.+|...+.+++|+ |++.+|++++.|++|+|||...
T Consensus 164 ~l~s~s---~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~s-p~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~ 239 (345)
T 3fm0_A 164 LLASAS---YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFD-PSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDP 239 (345)
T ss_dssp CEEEEE---TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---C
T ss_pred EEEEEe---CCCcEEEEEecCCCEEEEEEecCCCCceEEEEEC-CCCCEEEEEeCCCeEEEeccccCCCCccceeeccCC
Confidence 888774 45899999999885 668999999999999998 7889999999999999999632
Q ss_pred -CeEEEEccc-CCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-Cc---------EEEEeccCcCCcCCCCeeEEEECCC
Q 016446 218 -AELMEVSRT-EFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GE---------LVTSFEDHLLWHPDCNTNNIYITSD 284 (389)
Q Consensus 218 -g~~~~~l~g-h~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~---------~l~tl~gh~~~~~~~~v~sv~fSpd 284 (389)
.+|+.++.+ |...|++++|+|++.+||+++ |++|++|+.+ +. ....+.+|... |++|+|+|+
T Consensus 240 ~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~-----V~~v~~~p~ 314 (345)
T 3fm0_A 240 SWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQD-----VNCVAWNPK 314 (345)
T ss_dssp EEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSC-----EEEEEECSS
T ss_pred ccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCc-----EeEeEEeCC
Confidence 356777776 999999999999999999998 9999999985 32 12345688876 899999999
Q ss_pred C-CEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEe
Q 016446 285 Q-DLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 322 (389)
Q Consensus 285 G-~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl 322 (389)
+ .+|||||.| |+||||++.+++.+..+
T Consensus 315 ~~~~laS~s~D-----------g~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 315 EPGLLASCSDD-----------GEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp STTEEEEEETT-----------SCEEEEEECC-------
T ss_pred CceEEEEcCCC-----------CcEEEEEecCCCCcccc
Confidence 8 599999875 99999999988866544
No 42
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.2e-43 Score=353.84 Aligned_cols=303 Identities=13% Similarity=0.187 Sum_probs=263.2
Q ss_pred EEEEEeeccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEecc
Q 016446 6 VIEIVAARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRR 85 (389)
Q Consensus 6 v~~i~~~~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~ 85 (389)
+..+.+.+++||+++.||+|++||..+|++++++.+|. ..|++++|+ ++.|++ ++.| ..+++|++.+
T Consensus 122 ~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~--~~~l~s----~~~d------g~i~vwd~~~ 188 (445)
T 2ovr_B 122 ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT-GGVWSSQMR--DNIIIS----GSTD------RTLKVWNAET 188 (445)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCS-SCEEEEEEE--TTEEEE----EETT------SCEEEEETTT
T ss_pred EEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCC-CCEEEEEec--CCEEEE----EeCC------CeEEEEECCc
Confidence 46677779999999999999999999999999999875 899999998 578888 4577 8899999988
Q ss_pred CCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEcCCceEEEEecCCC
Q 016446 86 GKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPGIMLLIFNRSSS 163 (389)
Q Consensus 86 g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS~g~~la~~~~~s~ 163 (389)
|+.. ..+ ..+...+.+++|+ ++.|++|+.|++|++||+.+++++.++. ...|.+++| ++.++++++ .
T Consensus 189 ~~~~--~~~--~~h~~~v~~~~~~---~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~---~ 257 (445)
T 2ovr_B 189 GECI--HTL--YGHTSTVRCMHLH---EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-DGRRVVSGA---Y 257 (445)
T ss_dssp TEEE--EEE--CCCSSCEEEEEEE---TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-CSSCEEEEE---T
T ss_pred CcEE--EEE--CCCCCcEEEEEec---CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-CCCEEEEEc---C
Confidence 8752 111 2344456678885 5689999999999999999999988875 468999999 778888774 4
Q ss_pred CeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEE
Q 016446 164 HVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLF 243 (389)
Q Consensus 164 d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~l 243 (389)
|++|++||+.+++++.++.+|...+..++| ++..+++++.|++|++||+++++++.++.+|...+.++.+ ++++|
T Consensus 258 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l 332 (445)
T 2ovr_B 258 DFMVKVWDPETETCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNIL 332 (445)
T ss_dssp TSCEEEEEGGGTEEEEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEE
T ss_pred CCEEEEEECCCCcEeEEecCCCCceEEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEE
Confidence 589999999999999999999999999998 5789999999999999999999999999999999988876 56789
Q ss_pred EEEc-CCeEEEEeCC-CcEEEEecc---CcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeE
Q 016446 244 LTFR-NRTVAVWNFR-GELVTSFED---HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 318 (389)
Q Consensus 244 aS~s-D~tIklWd~~-G~~l~tl~g---h~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~ 318 (389)
++++ |++|++||++ ++++.++.+ |... |.+++|+ +++||+|+.| |+|+|||+.+|++
T Consensus 333 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-----v~~~~~~--~~~l~s~~~d-----------g~v~iwd~~~~~~ 394 (445)
T 2ovr_B 333 VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA-----VTCLQFN--KNFVITSSDD-----------GTVKLWDLKTGEF 394 (445)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECSTTSCSSC-----EEEEEEC--SSEEEEEETT-----------SEEEEEETTTCCE
T ss_pred EEEeCCCeEEEEECCCCcEEEEEccCCCCCCC-----EEEEEEC--CCEEEEEeCC-----------CeEEEEECCCCce
Confidence 9998 9999999996 999999997 5554 7999994 6899999865 9999999999999
Q ss_pred EEEec-----CCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCc----EEEccC
Q 016446 319 LAKIN-----ATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGL----VHVWSN 389 (389)
Q Consensus 319 l~tl~-----gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~t----IrlW~~ 389 (389)
+.++. +|. ..|++++|+|+|..||+|+.||+ |.+||.
T Consensus 395 ~~~~~~~~~~~~~----------------------------------~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df 440 (445)
T 2ovr_B 395 IRNLVTLESGGSG----------------------------------GVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 440 (445)
T ss_dssp EEEEEECTTGGGT----------------------------------CEEEEEEECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred eeeeeccccCCCC----------------------------------ceEEEEEecCCEEEEEEcccCCCCccEEEEEEC
Confidence 99983 444 58999999999999999999998 999984
No 43
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-44 Score=338.68 Aligned_cols=297 Identities=14% Similarity=0.129 Sum_probs=247.4
Q ss_pred eeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCe
Q 016446 35 RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGK 114 (389)
Q Consensus 35 ~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~ 114 (389)
....|.+|. +.|.+++|+|+|+.|+++ +.| ..+++|++.+++.. . .+ ..+...+.+++|+ |+|+
T Consensus 24 ~~~~l~~h~-~~v~~~~~s~~~~~l~~~----~~d------g~i~vwd~~~~~~~--~-~~-~~h~~~v~~~~~~-~~~~ 87 (369)
T 3zwl_B 24 KAIKLTGHE-RPLTQVKYNKEGDLLFSC----SKD------SSASVWYSLNGERL--G-TL-DGHTGTIWSIDVD-CFTK 87 (369)
T ss_dssp EEEEEECCS-SCEEEEEECTTSCEEEEE----ESS------SCEEEEETTTCCEE--E-EE-CCCSSCEEEEEEC-TTSS
T ss_pred ccEEEEEee-ceEEEEEEcCCCCEEEEE----eCC------CEEEEEeCCCchhh--h-hh-hhcCCcEEEEEEc-CCCC
Confidence 334588875 899999999999999994 466 78999999888761 1 11 2355567889998 8999
Q ss_pred EEEEecCCCeEEEEeCCCCeEEEEec-CCcEEEEEEc-CCceEEEEecC--CCCeeEEEEEcCCCe-----------EEE
Q 016446 115 VLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRS--SSHVPLKILSIEDGT-----------VLK 179 (389)
Q Consensus 115 ~Las~s~D~tiklWdl~~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~--s~d~tiklWd~~tG~-----------~l~ 179 (389)
+|++++.|++|++||+.+++++..+. ...|.+++|+ ++.+|+++..+ ..+++|++||+.+++ .+.
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~ 167 (369)
T 3zwl_B 88 YCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIH 167 (369)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceee
Confidence 99999999999999999999988876 6789999999 58888876433 223799999998764 445
Q ss_pred EEeecCC--ceeEEEEEecCCCeEEEEeCCCcEEEEECCC-CeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEe
Q 016446 180 VFYHLLH--RNKKVDFIEQFNEKLLVKQENENLQILDVRN-AELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWN 255 (389)
Q Consensus 180 tl~~~~~--~~~~v~f~~~~~~~l~~~s~D~tIklWd~~t-g~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd 255 (389)
.+..|.+ .+..++|+ |++..+++++.|++|++||+++ ++++..+.+|...|.+++|+|++++|++++ |++|++||
T Consensus 168 ~~~~~~~~~~~~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d 246 (369)
T 3zwl_B 168 KIITHEGLDAATVAGWS-TKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVD 246 (369)
T ss_dssp EEECCTTCCCEEEEEEC-GGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eccCCcCccceeEEEEc-CCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEE
Confidence 5566655 88999998 6788999999999999999999 899999999999999999999999999998 99999999
Q ss_pred CC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCccc-c--cCCCCCeEEEEeCCCCeEEEEecCCCCCCCc
Q 016446 256 FR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQ-W--MEGSAGSINVSSILTGKCLAKINATNCSPKV 331 (389)
Q Consensus 256 ~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~-~--~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~ 331 (389)
+. ++++..+. |... +..++|+|+|+++++++.+..... . .......|++||+.+++++..+.+|.
T Consensus 247 ~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~----- 315 (369)
T 3zwl_B 247 VSTLQVLKKYE-TDCP-----LNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHF----- 315 (369)
T ss_dssp TTTCCEEEEEE-CSSC-----EEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCS-----
T ss_pred CCCCceeeeec-CCCC-----ceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheeccc-----
Confidence 97 99999988 4443 799999999999999986510000 0 00001189999999999999999998
Q ss_pred ccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEcc
Q 016446 332 DDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
..|.+++|+|||++||+|+.||+|++|+
T Consensus 316 -----------------------------~~v~~~~~s~~~~~l~s~~~dg~v~iw~ 343 (369)
T 3zwl_B 316 -----------------------------GPLNTVAISPQGTSYASGGEDGFIRLHH 343 (369)
T ss_dssp -----------------------------SCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred -----------------------------CcEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 5899999999999999999999999997
No 44
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=9.3e-46 Score=412.21 Aligned_cols=313 Identities=12% Similarity=0.199 Sum_probs=272.9
Q ss_pred ccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEe
Q 016446 4 TKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 81 (389)
Q Consensus 4 ~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~ 81 (389)
..|..+.|+ +.++++++.||+|++|+..+++++..+.+|. ..|.+++|+|+|+.|++++ .| ..+++|
T Consensus 841 ~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~-~~v~~v~~spdg~~l~s~s----~d------g~v~vw 909 (1249)
T 3sfz_A 841 STIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHL-SWVHGVMFSPDGSSFLTAS----DD------QTIRVW 909 (1249)
T ss_dssp SCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEE----TT------SCEEEE
T ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCc-cceEEEEECCCCCEEEEEe----CC------CeEEEE
Confidence 457778888 9999999999999999999999999999875 8999999999999999954 55 445555
Q ss_pred Eec-----------------------------------------------------------------------------
Q 016446 82 YIR----------------------------------------------------------------------------- 84 (389)
Q Consensus 82 ~i~----------------------------------------------------------------------------- 84 (389)
++.
T Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d 989 (1249)
T 3sfz_A 910 ETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIE 989 (1249)
T ss_dssp EHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEE
T ss_pred EccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEE
Confidence 432
Q ss_pred --cCCCCCcceeEe-eecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEe-cCCcEEEEEEcCCceEEEEec
Q 016446 85 --RGKPDSGFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-SDKHVQEIKISPGIMLLIFNR 160 (389)
Q Consensus 85 --~g~~~~~~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl-~~~~V~~vafS~g~~la~~~~ 160 (389)
.++. +.. ..+...+.+++|+ |||++|++++.|++|++||+.+++++... +...|.+++|+|+..+++++
T Consensus 990 ~~~~~~-----~~~~~~h~~~v~~l~~s-~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~- 1062 (1249)
T 3sfz_A 990 LPNNRV-----FSSGVGHKKAVRHIQFT-ADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWS- 1062 (1249)
T ss_dssp TTTTSC-----EEECCCCSSCCCCEEEC-SSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEE-
T ss_pred cCCCce-----eeecccCCCceEEEEEC-CCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEE-
Confidence 2221 111 1244557779998 89999999999999999999999987544 35789999999877887764
Q ss_pred CCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCC
Q 016446 161 SSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYEN 240 (389)
Q Consensus 161 ~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg 240 (389)
.|++|++||+.+|++++++.+|.+.+..++|+ |++..+++++.|++|++||+.+++++.++.+|...|.+++|+|||
T Consensus 1063 --~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s-~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg 1139 (1249)
T 3sfz_A 1063 --FDGTVKVWNVITGRIERDFTCHQGTVLSCAIS-SDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDG 1139 (1249)
T ss_dssp --SSSEEEEEETTTTCCCEEEECCSSCCCCEEEC-SSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSS
T ss_pred --CCCcEEEEECCCCceeEEEcccCCcEEEEEEC-CCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCC
Confidence 45899999999999999999999999999998 788999999999999999999999999999999999999999999
Q ss_pred cEEEEEc-CCeEEEEeCC-CcEEEEe---------ccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEE
Q 016446 241 QLFLTFR-NRTVAVWNFR-GELVTSF---------EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSIN 309 (389)
Q Consensus 241 ~~laS~s-D~tIklWd~~-G~~l~tl---------~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIk 309 (389)
++||+++ ||+|++||+. |+++.++ .+|..+ |.+++|||||++||+++ |+|+
T Consensus 1140 ~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~l~fs~dg~~l~s~~-------------g~v~ 1201 (1249)
T 3sfz_A 1140 ILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGW-----VTDVCFSPDSKTLVSAG-------------GYLK 1201 (1249)
T ss_dssp SEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSC-----CCEEEECTTSSCEEEES-------------SSEE
T ss_pred CEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCce-----EEEEEECCCCCEEEECC-------------CeEE
Confidence 9999999 9999999997 9888776 677776 79999999999999973 7999
Q ss_pred EEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 310 VSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 310 lWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
+||+.+|+++.++.+|. ..|++++|||||++|++++.||+|++|+.
T Consensus 1202 vwd~~~g~~~~~~~~~~----------------------------------~~i~~~~~s~dg~~l~~~~~dg~v~vw~l 1247 (1249)
T 3sfz_A 1202 WWNVATGDSSQTFYTNG----------------------------------TNLKKIHVSPDFRTYVTVDNLGILYILQV 1247 (1249)
T ss_dssp EBCSSSCBCCCCCCCSS----------------------------------CCCCCCEECSSSCCEEEECTTCCEEEECC
T ss_pred EEECCCCceeeeeeccC----------------------------------CcccEEEECCCCCEEEEecCCcEEEEEee
Confidence 99999999999999987 58999999999999999999999999984
No 45
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.4e-45 Score=357.69 Aligned_cols=311 Identities=13% Similarity=0.106 Sum_probs=254.6
Q ss_pred EEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEecc
Q 016446 8 EIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRR 85 (389)
Q Consensus 8 ~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~ 85 (389)
.|.|+ +++||+++.||++++|+..++++...+..+ ..+...+|+|+|+.||++ +.| ..+++|++..
T Consensus 61 ~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~----~~d------g~i~iwd~~~ 128 (420)
T 3vl1_A 61 GNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA--DYTAVDTAKLQMRRFILG----TTE------GDIKVLDSNF 128 (420)
T ss_dssp TCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC--CEEEEEEECSSSCEEEEE----ETT------SCEEEECTTS
T ss_pred ceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC--CceEEEEEecCCCEEEEE----ECC------CCEEEEeCCC
Confidence 46677 899999999999999999999988888765 577777999999999994 567 7899999887
Q ss_pred CCCCCcceeEe-eecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceEEEEecC
Q 016446 86 GKPDSGFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIMLLIFNRS 161 (389)
Q Consensus 86 g~~~~~~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~la~~~~~ 161 (389)
+++ +.. ..+...+.+++|+ |+|++|++|+.|++|++||+.+++++.++. ...|.+++|+ ++.+|++++
T Consensus 129 ~~~-----~~~~~~h~~~v~~~~~~-~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-- 200 (420)
T 3vl1_A 129 NLQ-----REIDQAHVSEITKLKFF-PSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSAS-- 200 (420)
T ss_dssp CEE-----EEETTSSSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEE--
T ss_pred cce-----eeecccccCccEEEEEC-CCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEc--
Confidence 764 222 2455667889998 899999999999999999999999887775 5689999999 588888764
Q ss_pred CCCeeEEEEEcCCCeEEEEEee---cCCceeEEEEEe--------------------cCCCeEEEEeCCCcEEEEECCCC
Q 016446 162 SSHVPLKILSIEDGTVLKVFYH---LLHRNKKVDFIE--------------------QFNEKLLVKQENENLQILDVRNA 218 (389)
Q Consensus 162 s~d~tiklWd~~tG~~l~tl~~---~~~~~~~v~f~~--------------------~~~~~l~~~s~D~tIklWd~~tg 218 (389)
.|++|++||+.+|++++++.. |...+..++|.+ |++..+++++.|++|++||++++
T Consensus 201 -~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 279 (420)
T 3vl1_A 201 -LDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSK 279 (420)
T ss_dssp -TTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTC
T ss_pred -CCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCC
Confidence 458999999999999999985 344556666542 45678888999999999999999
Q ss_pred eEEEEc-ccCCCceEEEEEcCCCc-EEEEEc-CCeEEEEeCC-Cc-EEEEeccCcCCcCCCCeeEEEECCCCCEEEEEec
Q 016446 219 ELMEVS-RTEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNFR-GE-LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 293 (389)
Q Consensus 219 ~~~~~l-~gh~~~v~sv~fspdg~-~laS~s-D~tIklWd~~-G~-~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~ 293 (389)
+++..+ .+|...|.+++|+|+++ +|++++ |++|++||++ ++ ++.++.+|.... |..++ +|+|++||+++.
T Consensus 280 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~----v~~~~-~~~~~~l~s~~~ 354 (420)
T 3vl1_A 280 EQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTP----INNVY-FAAGALFVSSGF 354 (420)
T ss_dssp CEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSC----EEEEE-EETTEEEEEETT
T ss_pred ceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCC----ceEEE-eCCCCEEEEecC
Confidence 876665 56899999999999999 999998 9999999996 64 488888854432 67775 568999999876
Q ss_pred CCCcccccCCCCCeEEEEeCCCCeE---------EEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEE
Q 016446 294 AEPEDQWMEGSAGSINVSSILTGKC---------LAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDIT 364 (389)
Q Consensus 294 D~~~~~~~~s~D~tIklWd~~tg~~---------l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 364 (389)
|++|+|||+.+++. ...+.+|. ..|.
T Consensus 355 -----------d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~v~ 389 (420)
T 3vl1_A 355 -----------DTSIKLDIISDPESERPAIEFETPTFLVSND----------------------------------DAVS 389 (420)
T ss_dssp -----------TEEEEEEEECCTTCCSCEECTTSCEEECCSS----------------------------------CCCC
T ss_pred -----------CccEEEEeccCCCCCccceeccCccEEccCC----------------------------------cceE
Confidence 49999999886422 22233333 5899
Q ss_pred EEEECCCCC---EEEEecCCCcEEEccC
Q 016446 365 SLFYDEERN---EIYTGNRHGLVHVWSN 389 (389)
Q Consensus 365 svafSpdg~---~LaSgs~D~tIrlW~~ 389 (389)
+++|+|||+ .|++.+.++.+++|+.
T Consensus 390 ~~~~s~~~~~~g~l~a~g~~g~~~~~~~ 417 (420)
T 3vl1_A 390 QFCYVSDDESNGEVLEVGKNNFCALYNL 417 (420)
T ss_dssp EEEEECCSSSSCEEEEEETTTEEEEEES
T ss_pred EEEEccCCCCcceEEEEcCCceEEEEec
Confidence 999999999 7777788999999974
No 46
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1e-44 Score=352.79 Aligned_cols=305 Identities=12% Similarity=0.071 Sum_probs=241.7
Q ss_pred EEecccceeeeeeecCCcceEEEEEEeeCC-CEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe-eecccCce
Q 016446 27 AFSRETNRRICFLNVSPDEVIRSLFYNKNN-DSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPG 104 (389)
Q Consensus 27 lW~~~tg~~l~tl~~~~~~~v~sv~~spdg-~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~~~~~~ 104 (389)
+|+..+.++.+++.+|. ..|.+++|+|+| +.|+++ +.| ..++||++..++. ...+. ..+...+.
T Consensus 57 ~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~s~----~~d------g~i~iwd~~~~~~---~~~~~~~~h~~~v~ 122 (383)
T 3ei3_B 57 IRSLKSYKLHRTASPFD-RRVTSLEWHPTHPTTVAVG----SKG------GDIILWDYDVQNK---TSFIQGMGPGDAIT 122 (383)
T ss_dssp HHHHTTCEEEEEECCCS-SCEEEEEECSSCTTEEEEE----EBT------SCEEEEETTSTTC---EEEECCCSTTCBEE
T ss_pred cccccccceEEeccCCC-CCEEEEEECCCCCCEEEEE----cCC------CeEEEEeCCCccc---ceeeecCCcCCcee
Confidence 34555678888998875 899999999999 899994 467 7899999988875 22222 23566678
Q ss_pred eEEEecC-CCeEEEEecCCCeEEEEeCCCCeEEEEec-----CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeE
Q 016446 105 FVEFDDV-NGKVLTYSAQDSIYKVFDLKNYTMLYSIS-----DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTV 177 (389)
Q Consensus 105 ~v~Fs~p-dG~~Las~s~D~tiklWdl~~g~~l~tl~-----~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~ 177 (389)
+++|+ | ++++|++++.|++|++||+.+ +++..+. ...|.+++|+ ++.+|++++ .|++|++||+ ++++
T Consensus 123 ~~~~~-~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~i~d~-~~~~ 196 (383)
T 3ei3_B 123 GMKFN-QFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGD---STGRLLLLGL-DGHE 196 (383)
T ss_dssp EEEEE-TTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEE---TTSEEEEEET-TSCE
T ss_pred EEEeC-CCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEEC---CCCCEEEEEC-CCCE
Confidence 89998 7 789999999999999999975 5555553 2569999999 588888774 4589999998 6899
Q ss_pred EEEEeecCCceeEEEEEecCCC-eEEEEeCCCcEEEEECCC----CeEEEEcccCCCceEEEEEcC-CCcEEEEEc-CCe
Q 016446 178 LKVFYHLLHRNKKVDFIEQFNE-KLLVKQENENLQILDVRN----AELMEVSRTEFMTPSAFIFLY-ENQLFLTFR-NRT 250 (389)
Q Consensus 178 l~tl~~~~~~~~~v~f~~~~~~-~l~~~s~D~tIklWd~~t----g~~~~~l~gh~~~v~sv~fsp-dg~~laS~s-D~t 250 (389)
+.++.+|...+..++|+ |++. .+++++.|++|++||+++ ++++..+ +|...|.+++|+| +|++|++++ |++
T Consensus 197 ~~~~~~h~~~v~~~~~~-~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~ 274 (383)
T 3ei3_B 197 IFKEKLHKAKVTHAEFN-PRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNE 274 (383)
T ss_dssp EEEEECSSSCEEEEEEC-SSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSE
T ss_pred EEEeccCCCcEEEEEEC-CCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCc
Confidence 99999999999999998 6676 788899999999999998 7788877 7999999999999 999999998 999
Q ss_pred EEEEeCC-CcEEEEeccCcCCcCC--CCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCC
Q 016446 251 VAVWNFR-GELVTSFEDHLLWHPD--CNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNC 327 (389)
Q Consensus 251 IklWd~~-G~~l~tl~gh~~~~~~--~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~ 327 (389)
|+|||+. ++++.++.+|...... ..+. +.|+|++..++.+.... +.. +++.|++|+|||+.+|+++.++.+|..
T Consensus 275 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~s~d-g~~-s~s~d~~i~iwd~~~~~~~~~l~~~~~ 351 (383)
T 3ei3_B 275 IRVYSSYDWSKPDQIIIHPHRQFQHLTPIK-ATWHPMYDLIVAGRYPD-DQL-LLNDKRTIDIYDANSGGLVHQLRDPNA 351 (383)
T ss_dssp EEEEETTBTTSCSEEEECCBCCCTTSCCCC-CEECSSSSEEEEECBCC-TTT-CTTCCCCEEEEETTTCCEEEEECBTTB
T ss_pred EEEEECCCCccccccccccccccccccceE-EeccCCCCceEEEecCC-ccc-ccCCCCeEEEEecCCCceeeeecCCCC
Confidence 9999997 9988888877532100 0012 24444444443322110 111 345679999999999999999998642
Q ss_pred CCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 328 SPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
. ..|..++|+|||++||+|+ |++|+|||.
T Consensus 352 ~--------------------------------~~~~~~~~s~~g~~l~s~s-d~~i~iw~~ 380 (383)
T 3ei3_B 352 A--------------------------------GIISLNKFSPTGDVLASGM-GFNILIWNR 380 (383)
T ss_dssp C--------------------------------SCCCEEEECTTSSEEEEEE-TTEEEEEEC
T ss_pred C--------------------------------ceEEEEEEecCccEEEEec-CCcEEEEec
Confidence 0 4677789999999999998 999999984
No 47
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.4e-44 Score=377.55 Aligned_cols=304 Identities=12% Similarity=0.165 Sum_probs=241.2
Q ss_pred eeeeecCCcceEEEEEEeeCC-CEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe-eecccCceeEEEecCCC
Q 016446 36 ICFLNVSPDEVIRSLFYNKNN-DSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFVEFDDVNG 113 (389)
Q Consensus 36 l~tl~~~~~~~v~sv~~spdg-~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~pdG 113 (389)
...+.+| .+.|++|+|+|++ +.|++ ++.| ..++||++..++......... ..|...+.+|+|+ |||
T Consensus 375 ~~~l~~H-~~~V~~v~~~~~~~~~l~s----~s~D------~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s-~~g 442 (694)
T 3dm0_A 375 KGTMRAH-TDMVTAIATPIDNADIIVS----ASRD------KSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLS-SDG 442 (694)
T ss_dssp EEEEECC-SSCEEEEECCTTCCSEEEE----EETT------SEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEEC-TTS
T ss_pred hhhcccC-CceeEEEEecCCCCCEEEE----EeCC------CcEEEEEccCCCcccccccceecCCCCcEEEEEEC-CCC
Confidence 3457776 4999999999985 68888 5577 899999987654321111111 2455667889998 899
Q ss_pred eEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEE----eecCC
Q 016446 114 KVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVF----YHLLH 186 (389)
Q Consensus 114 ~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl----~~~~~ 186 (389)
++|+||+.|++|||||+.+++++.++. ...|.+|+|| ++.+|++++ .|++|||||+.. ++..++ .+|..
T Consensus 443 ~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s---~D~~i~iwd~~~-~~~~~~~~~~~~h~~ 518 (694)
T 3dm0_A 443 QFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSAS---RDRTIKLWNTLG-ECKYTISEGGEGHRD 518 (694)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEE---TTSCEEEECTTS-CEEEEECSSTTSCSS
T ss_pred CEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEe---CCCEEEEEECCC-CcceeeccCCCCCCC
Confidence 999999999999999999999988775 5689999999 588888774 458999999765 555555 35777
Q ss_pred ceeEEEEEecCC--CeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEE
Q 016446 187 RNKKVDFIEQFN--EKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVT 262 (389)
Q Consensus 187 ~~~~v~f~~~~~--~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~ 262 (389)
.+..++|+ |++ ..+++++.|++|+|||+++++++.++.+|...|.+++|+|+|++|+|++ |++|+|||+. |+++.
T Consensus 519 ~v~~~~~~-~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~ 597 (694)
T 3dm0_A 519 WVSCVRFS-PNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLY 597 (694)
T ss_dssp CEEEEEEC-SCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEE
T ss_pred cEEEEEEe-CCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 89999998 444 4788899999999999999999999999999999999999999999999 9999999996 99999
Q ss_pred EeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCC
Q 016446 263 SFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGK 342 (389)
Q Consensus 263 tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~ 342 (389)
++..|. . |.+++||||+.+|++++ |+.|+|||+.+++++..+..|...... .....+
T Consensus 598 ~~~~~~-~-----v~~~~~sp~~~~l~~~~------------~~~i~iwd~~~~~~~~~~~~~~~~~~~----~~~~~~- 654 (694)
T 3dm0_A 598 SLEANS-V-----IHALCFSPNRYWLCAAT------------EHGIKIWDLESKSIVEDLKVDLKAEAE----KADNSG- 654 (694)
T ss_dssp CCBCSS-C-----EEEEEECSSSSEEEEEE------------TTEEEEEETTTTEEEEEECCCCC---------------
T ss_pred EecCCC-c-----EEEEEEcCCCcEEEEEc------------CCCEEEEECCCCCChhhhccccccccc----cccccc-
Confidence 887654 2 79999999999999875 368999999999999999876521000 000000
Q ss_pred ccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 343 SKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
-....++.-.|++|+|||||++|+||+.||+||||+.
T Consensus 655 ----------~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 655 ----------PAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp ----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred ----------cccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEec
Confidence 0000111235899999999999999999999999984
No 48
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7e-44 Score=345.38 Aligned_cols=275 Identities=12% Similarity=0.052 Sum_probs=227.8
Q ss_pred ccEEEEEe--------eccEEEEEecCceEEEEeccc-------ceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecC
Q 016446 4 TKVIEIVA--------ARDIVFALAHSGVCAAFSRET-------NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASD 68 (389)
Q Consensus 4 ~~v~~i~~--------~~~~~a~~~~~gtiklW~~~t-------g~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~ 68 (389)
..|..|.| .+++||+++.|++||+|++.+ |+++.++.+|. ..|.+++|+|+|+.|++ ++.
T Consensus 22 ~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~-~~V~~~~~~~~~~~l~s----~s~ 96 (343)
T 2xzm_R 22 DWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHN-HFVSDLALSQENCFAIS----SSW 96 (343)
T ss_dssp SCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCS-SCEEEEEECSSTTEEEE----EET
T ss_pred hhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCC-CceEEEEECCCCCEEEE----EcC
Confidence 57899988 378999999999999999863 56788899875 89999999999999999 457
Q ss_pred CCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEe-----cCCc
Q 016446 69 NFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-----SDKH 143 (389)
Q Consensus 69 d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl-----~~~~ 143 (389)
| .+++|||+++|++. ..+ ..+...+.+|+|+ |||++|++++.|++|||||+. +++.... +...
T Consensus 97 D------~~v~lwd~~~~~~~--~~~--~~h~~~v~~v~~s-p~~~~l~s~~~d~~i~~wd~~-~~~~~~~~~~~~~~~~ 164 (343)
T 2xzm_R 97 D------KTLRLWDLRTGTTY--KRF--VGHQSEVYSVAFS-PDNRQILSAGAEREIKLWNIL-GECKFSSAEKENHSDW 164 (343)
T ss_dssp T------SEEEEEETTSSCEE--EEE--ECCCSCEEEEEEC-SSTTEEEEEETTSCEEEEESS-SCEEEECCTTTSCSSC
T ss_pred C------CcEEEEECCCCcEE--EEE--cCCCCcEEEEEEC-CCCCEEEEEcCCCEEEEEecc-CCceeeeecccCCCce
Confidence 7 89999999998761 112 2355667889998 899999999999999999996 5554443 2468
Q ss_pred EEEEEEcC-C----------ceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEE
Q 016446 144 VQEIKISP-G----------IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQI 212 (389)
Q Consensus 144 V~~vafS~-g----------~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIkl 212 (389)
|.+++|+| + .+|++++ .|++|++|| .+++++.++.+|...+..++|+ |++.+|++++.|++|+|
T Consensus 165 v~~~~~~~~~~~~~~~~~~~~~l~s~~---~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s-~~g~~l~sgs~dg~v~i 239 (343)
T 2xzm_R 165 VSCVRYSPIMKSANKVQPFAPYFASVG---WDGRLKVWN-TNFQIRYTFKAHESNVNHLSIS-PNGKYIATGGKDKKLLI 239 (343)
T ss_dssp EEEEEECCCCCSCSCCCSSCCEEEEEE---TTSEEEEEE-TTTEEEEEEECCSSCEEEEEEC-TTSSEEEEEETTCEEEE
T ss_pred eeeeeeccccccccccCCCCCEEEEEc---CCCEEEEEc-CCCceeEEEcCccccceEEEEC-CCCCEEEEEcCCCeEEE
Confidence 99999996 3 5787764 458999999 5789999999999999999998 78899999999999999
Q ss_pred EECC-CCeEEEEcccCCCceEEEEEcCCCcEEEEEcCCeEEEEeCC-CcEEE--Eec-----------cCcCCcCCCCee
Q 016446 213 LDVR-NAELMEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVT--SFE-----------DHLLWHPDCNTN 277 (389)
Q Consensus 213 Wd~~-tg~~~~~l~gh~~~v~sv~fspdg~~laS~sD~tIklWd~~-G~~l~--tl~-----------gh~~~~~~~~v~ 277 (389)
||+. .+.+...+ .|...|.+++|+|++++|+++.|++|+|||+. ++++. +++ +|... |.
T Consensus 240 wd~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~ 313 (343)
T 2xzm_R 240 WDILNLTYPQREF-DAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQ-----CT 313 (343)
T ss_dssp EESSCCSSCSEEE-ECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCC-----EE
T ss_pred EECCCCcccceee-cCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCc-----eE
Confidence 9995 44455544 34557999999999999987779999999996 66543 555 56655 79
Q ss_pred EEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCe
Q 016446 278 NIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK 317 (389)
Q Consensus 278 sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~ 317 (389)
+++|+|||++||+|+.| |+|||||+++|+
T Consensus 314 ~~~~sp~g~~l~sg~~D-----------g~v~~w~~~~g~ 342 (343)
T 2xzm_R 314 SLAWNALGKKLFAGFTD-----------GVIRTFSFETSA 342 (343)
T ss_dssp EEEECSSSCCEEEEETT-----------SEEEEEEEEEEE
T ss_pred EEEECCCCCeEEEecCC-----------ceEEEEEEEccC
Confidence 99999999999999875 999999987764
No 49
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4.1e-43 Score=349.96 Aligned_cols=306 Identities=12% Similarity=0.160 Sum_probs=255.3
Q ss_pred EEEEEeeccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEecc
Q 016446 6 VIEIVAARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRR 85 (389)
Q Consensus 6 v~~i~~~~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~ 85 (389)
+..+.|.+++||+++.||+|++||..+++++.++.+|. ..|.+++|+|++ .|++ ++.| .++++|++.+
T Consensus 125 ~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~-~~V~~l~~~~~~-~l~s----~s~d------g~i~vwd~~~ 192 (464)
T 3v7d_B 125 ITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHD-GGVWALKYAHGG-ILVS----GSTD------RTVRVWDIKK 192 (464)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEECSTT-EEEE----EETT------SCEEEEETTT
T ss_pred EEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCC-cCEEEEEEcCCC-EEEE----EeCC------CCEEEEECCC
Confidence 56677779999999999999999999999999999875 899999999999 7888 4577 8899999998
Q ss_pred CCCCCcceeEeeecccCceeEEEec-CCCeEEEEecCCCeEEEEeCCCCeE-----------------------EEEec-
Q 016446 86 GKPDSGFALFESESLKWPGFVEFDD-VNGKVLTYSAQDSIYKVFDLKNYTM-----------------------LYSIS- 140 (389)
Q Consensus 86 g~~~~~~~l~~~~~~~~~~~v~Fs~-pdG~~Las~s~D~tiklWdl~~g~~-----------------------l~tl~- 140 (389)
|+.. ..+ ..+...+..++|++ |++++|++|+.|++|++||+.+++. +..+.
T Consensus 193 ~~~~---~~~-~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 193 GCCT---HVF-EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp TEEE---EEE-CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred CcEE---EEE-CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 8751 122 23555677788874 6889999999999999999987763 33444
Q ss_pred -CCcEEEEEEcCCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCe
Q 016446 141 -DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAE 219 (389)
Q Consensus 141 -~~~V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~ 219 (389)
...|.++.. ++.+|++++ .|++|++||+.+++++.++.+|...+..++|+ |++..+++++.|++|++||+++++
T Consensus 269 ~~~~v~~~~~-~~~~l~~~~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 269 HMASVRTVSG-HGNIVVSGS---YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYD-HERKRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp CSSCEEEEEE-ETTEEEEEE---TTSCEEEEETTTTEEEEEECCCSSCEEEEEEE-TTTTEEEEEETTSCEEEEETTTTE
T ss_pred ccceEEEEcC-CCCEEEEEe---CCCeEEEEECCCCcEEEEecCCCCCEEEEEEc-CCCCEEEEEeCCCcEEEEECCCCc
Confidence 346766632 577888774 45899999999999999999999999999998 788999999999999999999999
Q ss_pred EEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCc
Q 016446 220 LMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPE 297 (389)
Q Consensus 220 ~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~ 297 (389)
++.++.+|...|.+++|+ +++|++++ |++|++||++ ++....+. |... +..++|+|+|++|++|+ |
T Consensus 344 ~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~l~~~~-d--- 411 (464)
T 3v7d_B 344 LMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNL-----SAITTFYVSDNILVSGS-E--- 411 (464)
T ss_dssp EEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTC-----CCEEEEEECSSEEEEEE-T---
T ss_pred EEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec-CCCC-----ccEEEEEeCCCEEEEec-C---
Confidence 999999999999999998 57899998 9999999997 77666553 3333 57899999999999987 3
Q ss_pred ccccCCCCCeEEEEeCCCCeEEEE-ecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEE
Q 016446 298 DQWMEGSAGSINVSSILTGKCLAK-INATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIY 376 (389)
Q Consensus 298 ~~~~~s~D~tIklWd~~tg~~l~t-l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~La 376 (389)
++|+|||+.+|+++++ +.+|. ..|++|+|+ +...++
T Consensus 412 --------g~i~iwd~~~g~~~~~~~~~~~----------------------------------~~v~~v~~~-~~~l~~ 448 (464)
T 3v7d_B 412 --------NQFNIYNLRSGKLVHANILKDA----------------------------------DQIWSVNFK-GKTLVA 448 (464)
T ss_dssp --------TEEEEEETTTCCEEESCTTTTC----------------------------------SEEEEEEEE-TTEEEE
T ss_pred --------CeEEEEECCCCcEEehhhccCC----------------------------------CcEEEEEec-CCEEEE
Confidence 8999999999999986 66665 589999998 445666
Q ss_pred EecCCCcEEEc
Q 016446 377 TGNRHGLVHVW 387 (389)
Q Consensus 377 Sgs~D~tIrlW 387 (389)
+++.|+.+.+|
T Consensus 449 ~~~~~g~~~i~ 459 (464)
T 3v7d_B 449 AVEKDGQSFLE 459 (464)
T ss_dssp EEEETTEEEEE
T ss_pred EEEeCCeEEEE
Confidence 66777766554
No 50
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.5e-43 Score=325.26 Aligned_cols=279 Identities=13% Similarity=0.181 Sum_probs=241.0
Q ss_pred ceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCC
Q 016446 33 NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVN 112 (389)
Q Consensus 33 g~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pd 112 (389)
.++++++.+|. +.|.+++| |+|+.|+++ +.| ..+++|++..++.. ..+ ..+...+.+++|+ |+
T Consensus 8 ~~~~~~l~~h~-~~v~~~~~-~~~~~l~s~----~~d------g~v~vw~~~~~~~~--~~~--~~~~~~v~~~~~~-~~ 70 (313)
T 3odt_A 8 YQLSATLKGHD-QDVRDVVA-VDDSKVASV----SRD------GTVRLWSKDDQWLG--TVV--YTGQGFLNSVCYD-SE 70 (313)
T ss_dssp CEEEEEECCCS-SCEEEEEE-EETTEEEEE----ETT------SEEEEEEESSSEEE--EEE--EECSSCEEEEEEE-TT
T ss_pred HHHHHHhhCCC-CCcEEEEe-cCCCEEEEE----EcC------CcEEEEECCCCEEE--EEe--ecCCccEEEEEEC-CC
Confidence 37888899875 99999999 999999994 577 78999999777641 112 2345667889998 89
Q ss_pred CeEEEEecCCCeEEEEeCCCC---eEEEEec--CCcEEEEEEcCCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCc
Q 016446 113 GKVLTYSAQDSIYKVFDLKNY---TMLYSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHR 187 (389)
Q Consensus 113 G~~Las~s~D~tiklWdl~~g---~~l~tl~--~~~V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~ 187 (389)
|++|++++.|++|++|++.+. +++..+. ...|.+++| ++..|++++ .|++|++|| +++.+..+..|...
T Consensus 71 ~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~---~d~~i~~~d--~~~~~~~~~~~~~~ 144 (313)
T 3odt_A 71 KELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF-QDGVVISGS---WDKTAKVWK--EGSLVYNLQAHNAS 144 (313)
T ss_dssp TTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE-ETTEEEEEE---TTSEEEEEE--TTEEEEEEECCSSC
T ss_pred CCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe-cCCEEEEEe---CCCCEEEEc--CCcEEEecccCCCc
Confidence 999999999999999998654 5566665 578999999 566787764 458999999 78999999999999
Q ss_pred eeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEccc-CCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEe
Q 016446 188 NKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT-EFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSF 264 (389)
Q Consensus 188 ~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~g-h~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl 264 (389)
+..+.|.++++..+++++.|++|++|| .+++++.+.. |...+.+++|+|+++ |++++ |++|++||++ ++++.++
T Consensus 145 v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~ 221 (313)
T 3odt_A 145 VWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTY 221 (313)
T ss_dssp EEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEE
T ss_pred eeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhh
Confidence 999999976889999999999999999 6777888877 999999999999999 77777 9999999997 9999999
Q ss_pred ccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCcc
Q 016446 265 EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSK 344 (389)
Q Consensus 265 ~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~ 344 (389)
.+|... |.+++|+|||+ |++++.| ++|++||+.+++++.++.+|.
T Consensus 222 ~~~~~~-----i~~~~~~~~~~-l~~~~~d-----------g~v~iwd~~~~~~~~~~~~~~------------------ 266 (313)
T 3odt_A 222 EGHESF-----VYCIKLLPNGD-IVSCGED-----------RTVRIWSKENGSLKQVITLPA------------------ 266 (313)
T ss_dssp ECCSSC-----EEEEEECTTSC-EEEEETT-----------SEEEEECTTTCCEEEEEECSS------------------
T ss_pred hcCCce-----EEEEEEecCCC-EEEEecC-----------CEEEEEECCCCceeEEEeccC------------------
Confidence 999887 89999999994 7787764 999999999999999999998
Q ss_pred ccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 345 KLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
..|++++|+|||+ |++|+.|++|++|+.
T Consensus 267 ----------------~~i~~~~~~~~~~-~~~~~~dg~i~iw~~ 294 (313)
T 3odt_A 267 ----------------ISIWSVDCMSNGD-IIVGSSDNLVRIFSQ 294 (313)
T ss_dssp ----------------SCEEEEEECTTSC-EEEEETTSCEEEEES
T ss_pred ----------------ceEEEEEEccCCC-EEEEeCCCcEEEEeC
Confidence 5899999999999 667999999999983
No 51
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.6e-43 Score=330.99 Aligned_cols=277 Identities=13% Similarity=0.156 Sum_probs=240.5
Q ss_pred cccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 3 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
...|..|.|+ +++||+++.||+|++|+..+|++++.+.+|. ..|.+++|+|+|+.|++ ++.| ..+++
T Consensus 23 ~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s----~~~d------~~i~v 91 (312)
T 4ery_A 23 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK-LGISDVAWSSDSNLLVS----ASDD------KTLKI 91 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSEEEE----EETT------SEEEE
T ss_pred CCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCC-CceEEEEEcCCCCEEEE----ECCC------CEEEE
Confidence 3579999999 8999999999999999999999999999875 89999999999999999 4577 88999
Q ss_pred eEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceEEE
Q 016446 81 EYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIMLLI 157 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~la~ 157 (389)
|++.++++. ..+ ..+...+..++|+ |++++|++|+.|++|++||+.+++++.++. ...|.+++|+ ++.+|++
T Consensus 92 wd~~~~~~~--~~~--~~~~~~v~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 166 (312)
T 4ery_A 92 WDVSSGKCL--KTL--KGHSNYVFCCNFN-PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 166 (312)
T ss_dssp EETTTCCEE--EEE--ECCSSCEEEEEEC-SSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EECCCCcEE--EEE--cCCCCCEEEEEEc-CCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEE
Confidence 999988762 112 2345567789998 899999999999999999999999998886 4689999999 5888887
Q ss_pred EecCCCCeeEEEEEcCCCeEEEEEe-ecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEE---
Q 016446 158 FNRSSSHVPLKILSIEDGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSA--- 233 (389)
Q Consensus 158 ~~~~s~d~tiklWd~~tG~~l~tl~-~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~s--- 233 (389)
++ .|++|++||+.+++++.++. .+...+..++|+ |++.++++++.|++|++||++++++++.+.+|...+..
T Consensus 167 ~~---~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 242 (312)
T 4ery_A 167 SS---YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS-PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 242 (312)
T ss_dssp EE---TTSCEEEEETTTCCEEEEECCSSCCCEEEEEEC-TTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCE
T ss_pred Ee---CCCcEEEEECCCCceeeEEeccCCCceEEEEEC-CCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEE
Confidence 74 45899999999999999886 455678889998 78899999999999999999999999999999775433
Q ss_pred EEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEE
Q 016446 234 FIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVS 311 (389)
Q Consensus 234 v~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklW 311 (389)
....+++++|++++ |++|++||++ +++++++++|... |.+++|+|++++||+++.+ .|++||||
T Consensus 243 ~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~-----v~~~~~~p~~~~l~s~~~~---------~d~~i~~W 308 (312)
T 4ery_A 243 NFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDV-----VISTACHPTENIIASAALE---------NDKTIKLW 308 (312)
T ss_dssp EEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSC-----EEEEEECSSSSEEEEEECT---------TTCCEEEE
T ss_pred EEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCc-----EEEEeecCcCCceEEEEcc---------CCccEEEe
Confidence 33457899999999 9999999997 9999999999887 8999999999999999743 47999999
Q ss_pred eC
Q 016446 312 SI 313 (389)
Q Consensus 312 d~ 313 (389)
+.
T Consensus 309 ~~ 310 (312)
T 4ery_A 309 KS 310 (312)
T ss_dssp EC
T ss_pred cC
Confidence 85
No 52
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.3e-43 Score=358.01 Aligned_cols=348 Identities=11% Similarity=0.059 Sum_probs=286.6
Q ss_pred cccEEEEEee--ccEEEEEecCceEEEEecccc----eeeeeeecCCcce-EEEEEEee--CCCEEEEEEEeecCCCcce
Q 016446 3 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETN----RRICFLNVSPDEV-IRSLFYNK--NNDSLITVSVYASDNFSSL 73 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg----~~l~tl~~~~~~~-v~sv~~sp--dg~~l~s~s~~~~~d~~~l 73 (389)
+..|..+.|+ +++||+++ ++.|++|+++++ ++++.+.+|. +. |.+++|+| ||+.||++ +.|
T Consensus 18 ~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~-~~~v~~~~~sp~~~~~~l~s~----~~d---- 87 (615)
T 1pgu_A 18 RNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHG-SSVVTTVKFSPIKGSQYLCSG----DES---- 87 (615)
T ss_dssp TTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTT-TSCEEEEEECSSTTCCEEEEE----ETT----
T ss_pred cCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCC-CceEEEEEECcCCCCCEEEEe----cCC----
Confidence 5678888999 88999988 899999999999 9999999986 78 99999999 99999994 567
Q ss_pred eeeeeeEeEeccCCCCC---cceeEe-eecccCceeEEEecCCCeEEEEecCC----CeEEEEeCCCCeEEEEec--CCc
Q 016446 74 KCRSTKIEYIRRGKPDS---GFALFE-SESLKWPGFVEFDDVNGKVLTYSAQD----SIYKVFDLKNYTMLYSIS--DKH 143 (389)
Q Consensus 74 ~~~~~~l~~i~~g~~~~---~~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D----~tiklWdl~~g~~l~tl~--~~~ 143 (389)
..+++|++.+|+... ...+.. ..+...+.+++|+ |||++|++++.| +.|++|| +++++..+. ...
T Consensus 88 --g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~ 162 (615)
T 1pgu_A 88 --GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWD-FEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQR 162 (615)
T ss_dssp --SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEEC-TTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSC
T ss_pred --CEEEEEeCCCCcccccccccccchhhcccccEEEEEEe-CCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCcc
Confidence 789999997661100 011222 2345567889998 999999999988 7999998 677777775 468
Q ss_pred EEEEEEcC-Cc-eEEEEecCCCCeeEEEEEcCCCeEEEEEeecCC---ceeEEEEEecC-CCeEEEEeCCCcEEEEECCC
Q 016446 144 VQEIKISP-GI-MLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLH---RNKKVDFIEQF-NEKLLVKQENENLQILDVRN 217 (389)
Q Consensus 144 V~~vafS~-g~-~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~---~~~~v~f~~~~-~~~l~~~s~D~tIklWd~~t 217 (389)
|.+++|+| +. ++++++ .|++|++||+.+++++.++.+|.. .+..++|+ |+ +..+++++.|++|++||+++
T Consensus 163 v~~~~~~~~~~~~l~~~~---~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~dg~i~vwd~~~ 238 (615)
T 1pgu_A 163 INACHLKQSRPMRSMTVG---DDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS-PDSGEFVITVGSDRKISCFDGKS 238 (615)
T ss_dssp EEEEEECSSSSCEEEEEE---TTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC-STTCCEEEEEETTCCEEEEETTT
T ss_pred EEEEEECCCCCcEEEEEe---CCCcEEEEeCCCcceeeeecccCCCCceEEEEEEC-CCCCCEEEEEeCCCeEEEEECCC
Confidence 99999995 55 677764 458999999999999999999988 89999998 67 88899999999999999999
Q ss_pred CeEEEEc-c---cCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEE
Q 016446 218 AELMEVS-R---TEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISY 291 (389)
Q Consensus 218 g~~~~~l-~---gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~ 291 (389)
++++..+ . +|...|.+++|+ ++++|++++ |++|++||++ ++++.++..|...+.. .+.++.|+ ++++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~l~~~ 315 (615)
T 1pgu_A 239 GEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGN-QQVGVVAT-GNGRIISL 315 (615)
T ss_dssp CCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGG-CEEEEEEE-ETTEEEEE
T ss_pred CCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccC-ceeEEEeC-CCCeEEEE
Confidence 9999999 6 999999999999 999999998 9999999997 9999999987432221 26788885 99999999
Q ss_pred ecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceeccc---ccccCCEEEEEE
Q 016446 292 CKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTV---GEALEDITSLFY 368 (389)
Q Consensus 292 s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~V~svaf 368 (389)
+.| ++|++||+.+++++.++.+|...+....+ +. ..+...+++.++|+.. .+|...|.+++|
T Consensus 316 ~~~-----------g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~---l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~ 380 (615)
T 1pgu_A 316 SLD-----------GTLNFYELGHDEVLKTISGHNKGITALTV-NP---LISGSYDGRIMEWSSSSMHQDHSNLIVSLDN 380 (615)
T ss_dssp ETT-----------SCEEEEETTEEEEEEEECCCSSCEEEEET-TT---TEEEETTSCEEETTTTEEECCCCSCEEEEEC
T ss_pred ECC-----------CCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---cEEECCCCeEEEEEchhhcCcccCceEEEEE
Confidence 865 99999999999999999999865444343 22 4444444444444422 567789999999
Q ss_pred CCCCCEEEEecCCCcEEEcc
Q 016446 369 DEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 369 Spdg~~LaSgs~D~tIrlW~ 388 (389)
|+++.|++++.|++|++|+
T Consensus 381 -~~~~~l~~~~~d~~i~~~~ 399 (615)
T 1pgu_A 381 -SKAQEYSSISWDDTLKVNG 399 (615)
T ss_dssp -CSTTCCEEEETTTEEEETT
T ss_pred -CCCcEEEEEeCCCCEEEEE
Confidence 7788999999999999997
No 53
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.5e-44 Score=340.59 Aligned_cols=236 Identities=13% Similarity=0.198 Sum_probs=201.4
Q ss_pred cccCceeEEEecCCCeEEEEecCCCeEEEEeCCC--CeEEEEec--CCcEEEEEEc-C--CceEEEEecCCCCeeEEEEE
Q 016446 99 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN--YTMLYSIS--DKHVQEIKIS-P--GIMLLIFNRSSSHVPLKILS 171 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~--g~~l~tl~--~~~V~~vafS-~--g~~la~~~~~s~d~tiklWd 171 (389)
|...+.+++|+ |||++||+|+.|++|||||+++ ++++.++. ...|++|+|+ | |.+||+++ .|++|||||
T Consensus 8 h~~~V~~~~~s-~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s---~D~~v~iWd 83 (297)
T 2pm7_B 8 HNEMIHDAVMD-YYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS---YDGKVMIWK 83 (297)
T ss_dssp CSSCEEEEEEC-TTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE---TTTEEEEEE
T ss_pred CcCceEEEEEC-CCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEc---CCCEEEEEE
Confidence 44567789998 9999999999999999999974 46777775 4689999998 4 78898874 568999999
Q ss_pred cCCCe--EEEEEeecCCceeEEEEEecC-CCeEEEEeCCCcEEEEECCCCeE--EEEcccCCCceEEEEEcCC-------
Q 016446 172 IEDGT--VLKVFYHLLHRNKKVDFIEQF-NEKLLVKQENENLQILDVRNAEL--MEVSRTEFMTPSAFIFLYE------- 239 (389)
Q Consensus 172 ~~tG~--~l~tl~~~~~~~~~v~f~~~~-~~~l~~~s~D~tIklWd~~tg~~--~~~l~gh~~~v~sv~fspd------- 239 (389)
+++|+ ++.++.+|...+.+|+|++.. +..+++++.|++|+|||++++.. ...+.+|...|.+++|+|+
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccccc
Confidence 99984 677888899999999998432 67888999999999999988642 4677899999999999997
Q ss_pred ------CcEEEEEc-CCeEEEEeCC-Cc----EEEEeccCcCCcCCCCeeEEEECCCC---CEEEEEecCCCcccccCCC
Q 016446 240 ------NQLFLTFR-NRTVAVWNFR-GE----LVTSFEDHLLWHPDCNTNNIYITSDQ---DLIISYCKAEPEDQWMEGS 304 (389)
Q Consensus 240 ------g~~laS~s-D~tIklWd~~-G~----~l~tl~gh~~~~~~~~v~sv~fSpdG---~~laS~s~D~~~~~~~~s~ 304 (389)
+++||+++ |++|||||++ ++ ++.+|++|..+ |++|+|+|++ ++|||+|.|
T Consensus 164 ~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~-----V~~v~~sp~~~~~~~las~s~D---------- 228 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW-----VRDVAWSPTVLLRSYMASVSQD---------- 228 (297)
T ss_dssp ------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC-----EEEEEECCCCSSSEEEEEEETT----------
T ss_pred CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCc-----eEEEEECCCCCCceEEEEEECC----------
Confidence 57999999 9999999996 65 77899999987 8999999995 899999875
Q ss_pred CCeEEEEeCCCCe---EEEEe--cCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEec
Q 016446 305 AGSINVSSILTGK---CLAKI--NATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGN 379 (389)
Q Consensus 305 D~tIklWd~~tg~---~l~tl--~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs 379 (389)
++|||||+.+++ ....+ .+|. ..|++++|||||++||+|+
T Consensus 229 -~~v~iWd~~~~~~~~~~~~~~~~~~~----------------------------------~~v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 229 -RTCIIWTQDNEQGPWKKTLLKEEKFP----------------------------------DVLWRASWSLSGNVLALSG 273 (297)
T ss_dssp -SCEEEEEESSTTSCCEEEESSSSCCS----------------------------------SCEEEEEECSSSCCEEEEE
T ss_pred -CcEEEEEeCCCCCccceeeeecccCC----------------------------------CcEEEEEECCCCCEEEEEc
Confidence 999999998753 22334 3444 5899999999999999999
Q ss_pred CCCcEEEcc
Q 016446 380 RHGLVHVWS 388 (389)
Q Consensus 380 ~D~tIrlW~ 388 (389)
.|++|+||+
T Consensus 274 ~D~~v~lw~ 282 (297)
T 2pm7_B 274 GDNKVTLWK 282 (297)
T ss_dssp TTSCEEEEE
T ss_pred CCCcEEEEE
Confidence 999999997
No 54
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=5.2e-44 Score=340.25 Aligned_cols=291 Identities=11% Similarity=0.178 Sum_probs=238.0
Q ss_pred eeeeeecCCcceEEEEEEeeC---CCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe-eecccCceeEEEec
Q 016446 35 RICFLNVSPDEVIRSLFYNKN---NDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFVEFDD 110 (389)
Q Consensus 35 ~l~tl~~~~~~~v~sv~~spd---g~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~ 110 (389)
+...+..+|...|.+|+|+|+ ++.++.++ +++ ..+++|++.+++.......+. ..+...+.+++|+
T Consensus 9 ~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~--~~~-------~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~- 78 (366)
T 3k26_A 9 CVNSLKEDHNQPLFGVQFNWHSKEGDPLVFAT--VGS-------NRVTLYECHSQGEIRLLQSYVDADADENFYTCAWT- 78 (366)
T ss_dssp EEEEEECTTCSCEEEEEECTTCCTTSCEEEEE--EET-------TEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEE-
T ss_pred EEEEeecCCCCceEEEEEecccCCCCceEEEE--CCC-------CEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEec-
Confidence 334555556699999999995 55333322 233 478999998777522111111 1133457789998
Q ss_pred CC----CeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEcC--CceEEEEecCCCCeeEEEEEcCCCeEEEEE-
Q 016446 111 VN----GKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP--GIMLLIFNRSSSHVPLKILSIEDGTVLKVF- 181 (389)
Q Consensus 111 pd----G~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS~--g~~la~~~~~s~d~tiklWd~~tG~~l~tl- 181 (389)
|+ |++|++|+.|++|++||+.+++++.++. ...|.+++|+| +.+|++++ .|++|++||+.+++++..+
T Consensus 79 ~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~ 155 (366)
T 3k26_A 79 YDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVS---KDHALRLWNIQTDTLVAIFG 155 (366)
T ss_dssp ECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEE---TTSCEEEEETTTTEEEEEEC
T ss_pred cCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEe---CCCeEEEEEeecCeEEEEec
Confidence 78 7899999999999999999999988886 46899999996 67777764 4589999999999999999
Q ss_pred --eecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEccc----------------------------CCCce
Q 016446 182 --YHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT----------------------------EFMTP 231 (389)
Q Consensus 182 --~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~g----------------------------h~~~v 231 (389)
..|...+..++|+ |++..+++++.|++|++||+++++++..+.. |...|
T Consensus 156 ~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 234 (366)
T 3k26_A 156 GVEGHRDEVLSADYD-LLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYV 234 (366)
T ss_dssp STTSCSSCEEEEEEC-TTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCC
T ss_pred ccccccCceeEEEEC-CCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceE
Confidence 6889999999998 6888999999999999999999887655554 99999
Q ss_pred EEEEEcCCCcEEEEEc-CCeEEEEeCC-Cc--------------EEEEeccCcCCcCCCCeeEEEECCC--CCEEEEEec
Q 016446 232 SAFIFLYENQLFLTFR-NRTVAVWNFR-GE--------------LVTSFEDHLLWHPDCNTNNIYITSD--QDLIISYCK 293 (389)
Q Consensus 232 ~sv~fspdg~~laS~s-D~tIklWd~~-G~--------------~l~tl~gh~~~~~~~~v~sv~fSpd--G~~laS~s~ 293 (389)
.+++|+ +++|++++ |++|++||+. ++ ++.++.+|... |+.++|+|| |++||+|+.
T Consensus 235 ~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~~~l~~~~~ 307 (366)
T 3k26_A 235 DCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCD-----IWYMRFSMDFWQKMLALGNQ 307 (366)
T ss_dssp CEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCC-----SSCCCCEECTTSSEEEEECT
T ss_pred EEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCc-----EEEEEEcCCCCCcEEEEEec
Confidence 999999 77999998 9999999986 54 48899999876 789999999 999999876
Q ss_pred CCCcccccCCCCCeEEEEeCCCCe----EEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEEC
Q 016446 294 AEPEDQWMEGSAGSINVSSILTGK----CLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYD 369 (389)
Q Consensus 294 D~~~~~~~~s~D~tIklWd~~tg~----~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafS 369 (389)
||+|++||+.+++ .+.++.+|.. ...|++++|+
T Consensus 308 -----------dg~i~vwd~~~~~~~~~~~~~~~~~~~--------------------------------~~~v~~~~~s 344 (366)
T 3k26_A 308 -----------VGKLYVWDLEVEDPHKAKCTTLTHHKC--------------------------------GAAIRQTSFS 344 (366)
T ss_dssp -----------TSCEEEEECCSSSGGGCEEEEECCTTC--------------------------------CSCEEEEEEC
T ss_pred -----------CCcEEEEECCCCCCccccceEEccccc--------------------------------CCceEEEEeC
Confidence 4999999999986 4458888841 1599999999
Q ss_pred CCCCEEEEecCCCcEEEccC
Q 016446 370 EERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 370 pdg~~LaSgs~D~tIrlW~~ 389 (389)
|||++||+|+.||+|++||.
T Consensus 345 ~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 345 RDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp TTSSEEEEEETTSEEEEEEC
T ss_pred CCCCeEEEEeCCCEEEEEEe
Confidence 99999999999999999984
No 55
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.4e-43 Score=336.83 Aligned_cols=286 Identities=13% Similarity=0.114 Sum_probs=234.1
Q ss_pred eecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCC---CeE
Q 016446 39 LNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVN---GKV 115 (389)
Q Consensus 39 l~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pd---G~~ 115 (389)
+.+ |.+.|.+|+|+|+|+.|+.++.....| ..++||++..++. .......+...+.+++|+ |+ |++
T Consensus 14 ~~~-h~~~v~~~~~~p~~~~l~~~~s~~~~d------~~v~iw~~~~~~~---~~~~~~~~~~~v~~~~~~-~~~~~~~~ 82 (357)
T 3i2n_A 14 QKG-FNYTVFDCKWVPCSAKFVTMGNFARGT------GVIQLYEIQHGDL---KLLREIEKAKPIKCGTFG-ATSLQQRY 82 (357)
T ss_dssp EEE-CSSCEEEEEECTTSSEEEEEEC--CCC------EEEEEEEECSSSE---EEEEEEEESSCEEEEECT-TCCTTTCC
T ss_pred ccC-CCCceEEEEEcCCCceEEEecCccCCC------cEEEEEeCCCCcc---cceeeecccCcEEEEEEc-CCCCCCce
Confidence 345 468999999999998776543211127 8999999998875 222233455667889998 77 799
Q ss_pred EEEecCCCeEEEEeCCCCe-EEEEec--CCcEEEEE------Ec-CCceEEEEecCCCCeeEEEEEcCCCe-EEEEEeec
Q 016446 116 LTYSAQDSIYKVFDLKNYT-MLYSIS--DKHVQEIK------IS-PGIMLLIFNRSSSHVPLKILSIEDGT-VLKVFYHL 184 (389)
Q Consensus 116 Las~s~D~tiklWdl~~g~-~l~tl~--~~~V~~va------fS-~g~~la~~~~~s~d~tiklWd~~tG~-~l~tl~~~ 184 (389)
|++|+.|++|++||+.+++ ++..+. ...|.+++ |+ ++.+|++++ .|++|++||+.+++ ++.++..|
T Consensus 83 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~---~d~~i~vwd~~~~~~~~~~~~~~ 159 (357)
T 3i2n_A 83 LATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGS---RDGTVKVWDPRQKDDPVANMEPV 159 (357)
T ss_dssp EEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEE---TTSCEEEECTTSCSSCSEEECCC
T ss_pred EEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEe---CCCeEEEEeCCCCCCcceecccc
Confidence 9999999999999999888 777775 46899995 56 477888774 45899999999998 78888766
Q ss_pred CC----ceeEEEEEe---cCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcC---CCcEEEEEc-CCeEEE
Q 016446 185 LH----RNKKVDFIE---QFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLY---ENQLFLTFR-NRTVAV 253 (389)
Q Consensus 185 ~~----~~~~v~f~~---~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fsp---dg~~laS~s-D~tIkl 253 (389)
.+ .+..++|.+ |++..+++++.|++|++||+++++++.. ..|...|.+++|+| ++++|++++ |++|++
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i 238 (357)
T 3i2n_A 160 QGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHV 238 (357)
T ss_dssp TTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEE
T ss_pred CCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEE
Confidence 55 678888532 6788999999999999999999998554 67889999999999 999999998 999999
Q ss_pred EeCC-CcEEEEec-----cCcCCcCCCCeeEEEECCCCC-EEEEEecCCCcccccCCCCCeEEEEeCCCC----------
Q 016446 254 WNFR-GELVTSFE-----DHLLWHPDCNTNNIYITSDQD-LIISYCKAEPEDQWMEGSAGSINVSSILTG---------- 316 (389)
Q Consensus 254 Wd~~-G~~l~tl~-----gh~~~~~~~~v~sv~fSpdG~-~laS~s~D~~~~~~~~s~D~tIklWd~~tg---------- 316 (389)
||++ ++++..+. +|... |.+++|+|+|+ +|++++.| |+|+|||+.++
T Consensus 239 ~d~~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~l~~~~~d-----------g~i~iwd~~~~~~~~~~~~~g 302 (357)
T 3i2n_A 239 FDMRTQHPTKGFASVSEKAHKST-----VWQVRHLPQNRELFLTAGGA-----------GGLHLWKYEYPIQRSKKDSEG 302 (357)
T ss_dssp EEEEEEETTTEEEEEEEECCSSC-----EEEEEEETTEEEEEEEEETT-----------SEEEEEEEECCSCC--CCTTS
T ss_pred EeCcCCCcccceeeeccCCCcCC-----EEEEEECCCCCcEEEEEeCC-----------CcEEEeecCCCcccccccCCC
Confidence 9996 76655554 88876 89999999999 89998765 99999999865
Q ss_pred ---------eEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEE-EecCCCcEEE
Q 016446 317 ---------KCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIY-TGNRHGLVHV 386 (389)
Q Consensus 317 ---------~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~La-Sgs~D~tIrl 386 (389)
+++.++.+|. ..|++++|+|||+.|+ ||+.|++|++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~----------------------------------~~v~~~~~s~~~~~l~~s~~~d~~i~i 348 (357)
T 3i2n_A 303 IEMGVAGSVSLLQNVTLST----------------------------------QPISSLDWSPDKRGLCVCSSFDQTVRV 348 (357)
T ss_dssp CCCCCCCEEEEEEEEECCS----------------------------------SCEEEEEECSSSTTEEEEEETTSEEEE
T ss_pred CccccccccceeeccccCC----------------------------------CCeeEEEEcCCCCeEEEEecCCCcEEE
Confidence 4666777776 6999999999999998 8999999999
Q ss_pred ccC
Q 016446 387 WSN 389 (389)
Q Consensus 387 W~~ 389 (389)
|+.
T Consensus 349 w~~ 351 (357)
T 3i2n_A 349 LIV 351 (357)
T ss_dssp EEE
T ss_pred EEC
Confidence 983
No 56
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.2e-43 Score=327.49 Aligned_cols=274 Identities=10% Similarity=0.082 Sum_probs=226.6
Q ss_pred EEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe-eecccCceeEEEecCCCeEEEEecCCCeE
Q 016446 47 IRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIY 125 (389)
Q Consensus 47 v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~ti 125 (389)
.+.|+|||++ .||. + .| ++|+|||+.+|++. ..+. +.+...+.+|+|+ |+|++||+|+.|++|
T Consensus 28 ~~~l~WS~~~-~lAv----g-~D------~tV~iWd~~tg~~~---~~~~~~~~~~~V~~v~~~-~~~~~l~sgs~Dg~v 91 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAV----A-LD------NSVYLWSASSGDIL---QLLQMEQPGEYISSVAWI-KEGNYLAVGTSSAEV 91 (318)
T ss_dssp CBCEEECTTS-EEEE----E-ET------TEEEEEETTTCCEE---EEEECCSTTCCEEEEEEC-TTSSEEEEEETTSEE
T ss_pred ceEEEECCCC-EEEE----E-eC------CEEEEEECCCCCEE---EEEEecCCCCeEEEEEEC-CCCCEEEEEECCCcE
Confidence 4779999987 5665 2 35 78999999999872 2333 4566668899998 899999999999999
Q ss_pred EEEeCCCCeEEEEecCCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCC-eEEEEEeecCCceeEEEEEecCCCeEEE
Q 016446 126 KVFDLKNYTMLYSISDKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDG-TVLKVFYHLLHRNKKVDFIEQFNEKLLV 203 (389)
Q Consensus 126 klWdl~~g~~l~tl~~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG-~~l~tl~~~~~~~~~v~f~~~~~~~l~~ 203 (389)
+|||+++++++.++.++......++ ++..|++++ .++.+++|+..++ ..+.++.+|...+..+.|. +++..+++
T Consensus 92 ~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~s 167 (318)
T 4ggc_A 92 QLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGS---RSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWA-PDGRHLAS 167 (318)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEE---TTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC-TTSSEEEE
T ss_pred EEeecCCceeEEEecCccceEEEeecCCCEEEEEe---cCCceEeeecCCCceeEEEEcCccCceEEEEEc-CCCCEEEE
Confidence 9999999999988875433334455 467777764 4579999998876 5668888999999999997 67889999
Q ss_pred EeCCCcEEEEECCCCeE----EEEcccCCCceEEEEEcCCCcEE---EEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCC
Q 016446 204 KQENENLQILDVRNAEL----MEVSRTEFMTPSAFIFLYENQLF---LTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDC 274 (389)
Q Consensus 204 ~s~D~tIklWd~~tg~~----~~~l~gh~~~v~sv~fspdg~~l---aS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~ 274 (389)
++.|++|+|||+++++. ......|...|.+++++|++..+ ++++ |++|+|||.+ ++...... |...
T Consensus 168 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~---- 242 (318)
T 4ggc_A 168 GGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQ---- 242 (318)
T ss_dssp EETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSC----
T ss_pred EecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceee----
Confidence 99999999999998764 45567888999999999977643 3556 9999999997 66666554 3333
Q ss_pred CeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceec
Q 016446 275 NTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRS 354 (389)
Q Consensus 275 ~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (389)
+..++|+|+++.+++++. +.|++|+|||+.+++++++|+||+
T Consensus 243 -v~~~~~~~~~~~~~~~sg---------~~d~~i~iwd~~~~~~~~~l~gH~---------------------------- 284 (318)
T 4ggc_A 243 -VCSILWSPHYKELISGHG---------FAQNQLVIWKYPTMAKVAELKGHT---------------------------- 284 (318)
T ss_dssp -EEEEEEETTTTEEEEEEC---------TTTCCEEEEETTTCCEEEEECCCS----------------------------
T ss_pred -eeeeeecccccceEEEEE---------cCCCEEEEEECCCCcEEEEEcCCC----------------------------
Confidence 799999999999998763 357999999999999999999998
Q ss_pred ccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 355 TVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 355 ~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
..|++|+|||||++|||||.|++|||||.
T Consensus 285 ------~~V~~l~~spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 285 ------SRVLSLTMSPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp ------SCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred ------CCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 59999999999999999999999999984
No 57
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.5e-43 Score=337.77 Aligned_cols=299 Identities=15% Similarity=0.168 Sum_probs=241.1
Q ss_pred CceEEEEecccceeeeeeecCCcceEEEEEEeeCCC-EEEEEEEeecCCCcceeeeeeeEeEe----ccCCCCCc---ce
Q 016446 22 SGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNND-SLITVSVYASDNFSSLKCRSTKIEYI----RRGKPDSG---FA 93 (389)
Q Consensus 22 ~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~-~l~s~s~~~~~d~~~l~~~~~~l~~i----~~g~~~~~---~~ 93 (389)
...+.+|+.+..........| .+.|.+++|+|+|+ .||++ +.| ..+++|++ ..|+.... ..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~l~~~----~~d------g~i~iw~~~~~~~~~~~~~~~~~~~ 92 (425)
T 1r5m_A 24 NSIDSSDDLDGFVKILKEIVK-LDNIVSSTWNPLDESILAYG----EKN------SVARLARIVETDQEGKKYWKLTIIA 92 (425)
T ss_dssp ----------CCCEECEEEEE-CSCCSEEEECSSCTTEEEEE----ETB------TEEEEEEEEEC------CEEEEEEE
T ss_pred ccccccccchhhhhheeeeec-cCceEEEEECCCCCcEEEEe----cCC------ceEEEEEEecccCCccccccccccc
Confidence 345567887544333333333 37899999999999 99994 567 78999999 88773100 01
Q ss_pred eEeee---------cccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceEEEEecC
Q 016446 94 LFESE---------SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIMLLIFNRS 161 (389)
Q Consensus 94 l~~~~---------~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~la~~~~~ 161 (389)
.+.+. +...+.+++|+ |||++||+++.|++|++|| .+++++..+. ...|.+++|+ ++.+|++++
T Consensus 93 ~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-- 168 (425)
T 1r5m_A 93 ELRHPFALSASSGKTTNQVTCLAWS-HDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMD-- 168 (425)
T ss_dssp EEECCCCCC------CBCEEEEEEC-TTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEE--
T ss_pred cccccccccccccCCCCceEEEEEc-CCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEe--
Confidence 11111 23457789998 8999999999999999999 6888888886 4689999999 588888774
Q ss_pred CCCeeEEEEEcCCCeEEEEEeecCCc---------------eeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEccc
Q 016446 162 SSHVPLKILSIEDGTVLKVFYHLLHR---------------NKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT 226 (389)
Q Consensus 162 s~d~tiklWd~~tG~~l~tl~~~~~~---------------~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~g 226 (389)
.|++|++||+.+|+++..+..+... +..++|++ ++.+++++.|+.|++||+.+++++..+.+
T Consensus 169 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~i~~~d~~~~~~~~~~~~ 245 (425)
T 1r5m_A 169 -VENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD--DDKFVIPGPKGAIFVYQITEKTPTGKLIG 245 (425)
T ss_dssp -TTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEE--TTEEEEECGGGCEEEEETTCSSCSEEECC
T ss_pred -cCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcC--CCEEEEEcCCCeEEEEEcCCCceeeeecc
Confidence 4589999999999999999987776 89999984 57899999999999999999999999999
Q ss_pred CCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCC
Q 016446 227 EFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGS 304 (389)
Q Consensus 227 h~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~ 304 (389)
|...|.+++|+|++++|++++ |++|++||+. ++++.++.+|... |.+++|+||| +|++++.|
T Consensus 246 ~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----i~~~~~~~~~-~l~~~~~d---------- 309 (425)
T 1r5m_A 246 HHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQS-----IVSASWVGDD-KVISCSMD---------- 309 (425)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSC-----EEEEEEETTT-EEEEEETT----------
T ss_pred CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCcc-----EEEEEECCCC-EEEEEeCC----------
Confidence 999999999999999999999 9999999997 8999999999876 8999999999 99998765
Q ss_pred CCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcE
Q 016446 305 AGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLV 384 (389)
Q Consensus 305 D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tI 384 (389)
++|++||+.+++++..+.+|. ..|.+++|+|||++||+|+.|++|
T Consensus 310 -~~i~i~d~~~~~~~~~~~~~~----------------------------------~~i~~~~~s~~~~~l~~~~~dg~i 354 (425)
T 1r5m_A 310 -GSVRLWSLKQNTLLALSIVDG----------------------------------VPIFAGRISQDGQKYAVAFMDGQV 354 (425)
T ss_dssp -SEEEEEETTTTEEEEEEECTT----------------------------------CCEEEEEECTTSSEEEEEETTSCE
T ss_pred -CcEEEEECCCCcEeEecccCC----------------------------------ccEEEEEEcCCCCEEEEEECCCeE
Confidence 999999999999999999998 589999999999999999999999
Q ss_pred EEccC
Q 016446 385 HVWSN 389 (389)
Q Consensus 385 rlW~~ 389 (389)
++||.
T Consensus 355 ~i~~~ 359 (425)
T 1r5m_A 355 NVYDL 359 (425)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99984
No 58
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.1e-44 Score=358.32 Aligned_cols=302 Identities=14% Similarity=0.103 Sum_probs=239.3
Q ss_pred eeeeeeecCCcceEEEEEEee-CCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe-eecccCceeEEEecC
Q 016446 34 RRICFLNVSPDEVIRSLFYNK-NNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFVEFDDV 111 (389)
Q Consensus 34 ~~l~tl~~~~~~~v~sv~~sp-dg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~p 111 (389)
+...+..++ ...|.+|+|+| +++.||+ |+.| ..|+|||+..++.. .+.. ..|.+.|.+|+|+|.
T Consensus 110 ~~~~~~~~~-~~~V~~l~~~P~~~~~las----Gs~d------g~i~lWd~~~~~~~---~~~~~~gH~~~V~~l~f~p~ 175 (435)
T 4e54_B 110 RILQKAAPF-DRRATSLAWHPTHPSTVAV----GSKG------GDIMLWNFGIKDKP---TFIKGIGAGGSITGLKFNPL 175 (435)
T ss_dssp TSCCEEEEC-SSCEEEEEECSSCTTCEEE----EETT------SCEEEECSSCCSCC---EEECCCSSSCCCCEEEECSS
T ss_pred eecccCCCC-CCCEEEEEEeCCCCCEEEE----EeCC------CEEEEEECCCCCce---eEEEccCCCCCEEEEEEeCC
Confidence 334455665 47899999999 4678888 5677 88999999877642 1222 346667889999844
Q ss_pred CCeEEEEecCCCeEEEEeCCCCeEEEEec----CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCC
Q 016446 112 NGKVLTYSAQDSIYKVFDLKNYTMLYSIS----DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLH 186 (389)
Q Consensus 112 dG~~Las~s~D~tiklWdl~~g~~l~tl~----~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~ 186 (389)
|+++|+|||.|++|||||++++.+..... ...|.+++|+ ++.+||++ +.|++|++||+. |+++.++.+|..
T Consensus 176 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g---~~dg~i~~wd~~-~~~~~~~~~h~~ 251 (435)
T 4e54_B 176 NTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTG---DNVGNVILLNMD-GKELWNLRMHKK 251 (435)
T ss_dssp CTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEE---CSSSBEEEEESS-SCBCCCSBCCSS
T ss_pred CCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEE---eCCCcEeeeccC-cceeEEEecccc
Confidence 89999999999999999997665443332 2368899999 68888876 456899999985 688899999999
Q ss_pred ceeEEEEEecCCC-eEEEEeCCCcEEEEECCCCeEEEE---cccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcE
Q 016446 187 RNKKVDFIEQFNE-KLLVKQENENLQILDVRNAELMEV---SRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GEL 260 (389)
Q Consensus 187 ~~~~v~f~~~~~~-~l~~~s~D~tIklWd~~tg~~~~~---l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~ 260 (389)
.|..|+|+ |++. .+++++.|++|+|||+++++.... ..+|...|.+++|+|||++|++++ |++|+|||+. +++
T Consensus 252 ~v~~v~~~-p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 252 KVTHVALN-PCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC 330 (435)
T ss_dssp CEEEEEEC-TTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS
T ss_pred eEEeeeec-CCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCcc
Confidence 99999998 5554 566789999999999998776443 468999999999999999999999 9999999996 999
Q ss_pred EEEeccCcCCcCC-CCeeEEEECCCCCEEEEEecCCCccc-ccCCCCCeEEEEeCCCCeEEEEecC-CCCCCCcccccCC
Q 016446 261 VTSFEDHLLWHPD-CNTNNIYITSDQDLIISYCKAEPEDQ-WMEGSAGSINVSSILTGKCLAKINA-TNCSPKVDDELGS 337 (389)
Q Consensus 261 l~tl~gh~~~~~~-~~v~sv~fSpdG~~laS~s~D~~~~~-~~~s~D~tIklWd~~tg~~l~tl~g-H~~~~~~~~~~~~ 337 (389)
...+.+|...... ..+..+.|+|++.++++++.+..... +.+..+++|++||+.+|+++.++.+ |.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~----------- 399 (435)
T 4e54_B 331 PLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPES----------- 399 (435)
T ss_dssp EEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSC-----------
T ss_pred ceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCC-----------
Confidence 9999888653211 12346789999999998876543333 4455668999999999999999864 54
Q ss_pred CCCCCccccccccceecccccccCCEEEE-EECCCCCEEEEecCCCcEEEccC
Q 016446 338 SSTGKSKKLNKSSYIRSTVGEALEDITSL-FYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~V~sv-afSpdg~~LaSgs~D~tIrlW~~ 389 (389)
..|.++ +|||||++||||+ |++|+||+.
T Consensus 400 -----------------------~~v~s~~~fspdg~~lasg~-d~~i~iW~~ 428 (435)
T 4e54_B 400 -----------------------SGISSLNEFNPMGDTLASAM-GYHILIWSQ 428 (435)
T ss_dssp -----------------------CCCCCEEEECTTSSCEEEEC-SSEEEECCC
T ss_pred -----------------------CcEEEEEEECCCCCEEEEEc-CCcEEEEEC
Confidence 477777 7999999999987 889999984
No 59
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.9e-43 Score=340.01 Aligned_cols=301 Identities=9% Similarity=0.017 Sum_probs=244.8
Q ss_pred eeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCc-ceeEe-eecccCceeEEEecCC
Q 016446 35 RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSG-FALFE-SESLKWPGFVEFDDVN 112 (389)
Q Consensus 35 ~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~-~~l~~-~~~~~~~~~v~Fs~pd 112 (389)
+..++.+| .+.|.+|+|+| +.|++ ++.| ..+++|++..++.... ..+.. ..+...+.+++|+ |+
T Consensus 8 ~~~~~~~h-~~~i~~~~~~~--~~l~s----~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~ 73 (397)
T 1sq9_A 8 TANAGKAH-DADIFSVSACN--SFTVS----CSGD------GYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL-QA 73 (397)
T ss_dssp EEEESSCS-SSCEEEEEECS--SEEEE----EETT------SEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEE-EE
T ss_pred hhhhhhhh-hcCeEEEEecC--CeEEE----EcCC------CEEEEEECCCcccccCCCcceEEecCCCcEEEEEEe-cc
Confidence 34556776 48999999999 88888 4577 8999999988872111 01121 2355567889998 88
Q ss_pred ----C---eEEEEecCCCeEEEEeCCCCeE-----EEEec-------CCcEEEEEEc----C-Cce-EEEEecCCCCeeE
Q 016446 113 ----G---KVLTYSAQDSIYKVFDLKNYTM-----LYSIS-------DKHVQEIKIS----P-GIM-LLIFNRSSSHVPL 167 (389)
Q Consensus 113 ----G---~~Las~s~D~tiklWdl~~g~~-----l~tl~-------~~~V~~vafS----~-g~~-la~~~~~s~d~ti 167 (389)
| ++|++++.|++|++||+.++++ +..+. ...|.+++|+ | +.+ |++++ .|++|
T Consensus 74 ~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~---~dg~i 150 (397)
T 1sq9_A 74 IERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATD---VKGTT 150 (397)
T ss_dssp EETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEE---TTSCE
T ss_pred cccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEe---CCCcE
Confidence 9 9999999999999999988886 77764 2689999999 6 666 77764 45899
Q ss_pred EEEEcCC------CeEEE-----EEee-------cCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEccc---
Q 016446 168 KILSIED------GTVLK-----VFYH-------LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT--- 226 (389)
Q Consensus 168 klWd~~t------G~~l~-----tl~~-------~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~g--- 226 (389)
++||+.+ +++++ ++.+ |...+..++|+ |++ .+++++.|++|++||+++++++..+.+
T Consensus 151 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 228 (397)
T 1sq9_A 151 YIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDIS-ERG-LIATGFNNGTVQISELSTLRPLYNFESQHS 228 (397)
T ss_dssp EEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEEC-TTS-EEEEECTTSEEEEEETTTTEEEEEEECCC-
T ss_pred EEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEEC-CCc-eEEEEeCCCcEEEEECCCCceeEEEecccc
Confidence 9999999 88888 8854 77889999998 667 888899999999999999999999999
Q ss_pred C---CCceEEEEEcCCCcEEEEEc-C---CeEEEEeCC-CcEEEEecc-------------CcCCcCCCCeeEEEECCCC
Q 016446 227 E---FMTPSAFIFLYENQLFLTFR-N---RTVAVWNFR-GELVTSFED-------------HLLWHPDCNTNNIYITSDQ 285 (389)
Q Consensus 227 h---~~~v~sv~fspdg~~laS~s-D---~tIklWd~~-G~~l~tl~g-------------h~~~~~~~~v~sv~fSpdG 285 (389)
| ...|.+++|+|++++|++++ | ++|++||+. ++++.++.+ |... |.+++|+|||
T Consensus 229 h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~ 303 (397)
T 1sq9_A 229 MINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW-----VMSLSFNDSG 303 (397)
T ss_dssp --CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC-----EEEEEECSSS
T ss_pred ccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc-----EEEEEECCCC
Confidence 9 99999999999999999998 9 999999996 999999999 8876 8999999999
Q ss_pred CEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEec------CCCCCCCcccccCCCCCCCccccccccceecccccc
Q 016446 286 DLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKIN------ATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEA 359 (389)
Q Consensus 286 ~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~------gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (389)
++|++++.| ++|+|||+.+++++.++. +|... .+.+. . .....|
T Consensus 304 ~~l~~~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~~~g~-----------~--~~~~~~ 353 (397)
T 1sq9_A 304 ETLCSAGWD-----------GKLRFWDVKTKERITTLNMHCDDIEIEED------ILAVD-----------E--HGDSLA 353 (397)
T ss_dssp SEEEEEETT-----------SEEEEEETTTTEEEEEEECCGGGCSSGGG------CCCBC-----------T--TSCBCS
T ss_pred CEEEEEeCC-----------CeEEEEEcCCCceeEEEecccCcccchhh------hhccc-----------c--cccccc
Confidence 999999865 999999999999999999 77100 00000 0 000111
Q ss_pred cCCEEEEEECCCC----------CEEEEecCCCcEEEccC
Q 016446 360 LEDITSLFYDEER----------NEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 360 ~~~V~svafSpdg----------~~LaSgs~D~tIrlW~~ 389 (389)
...|++++|+||| ++|++|+.|++|++|+.
T Consensus 354 ~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 354 EPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp SCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred CCceeEEEeccccccccccccccceEEEecCCCcEEEEEc
Confidence 3699999999999 79999999999999983
No 60
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2.6e-43 Score=350.08 Aligned_cols=267 Identities=14% Similarity=0.160 Sum_probs=210.4
Q ss_pred EEEEecCceEEEEecccc---eeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcc
Q 016446 16 VFALAHSGVCAAFSRETN---RRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 92 (389)
Q Consensus 16 ~a~~~~~gtiklW~~~tg---~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~ 92 (389)
-.+.+...+|+||+...+ +++++++++. .+|..|+|+||-.-|+.+ ..|++
T Consensus 56 ~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~---------------------~~~~~---- 109 (356)
T 2w18_A 56 CIITACEDVVSLWKALDAWQWEKLYTWHFAE-VPVLQIVPVPDVYNLVCV---------------------ALGNL---- 109 (356)
T ss_dssp EEEEEESSEEEEEEESSSSBEEEEEEEECCS-SCEEEECCCTTCCSCEEE---------------------EECSS----
T ss_pred EEEEeccceEEEcccCCCccceeeEEEeccC-ceeEEEEEcCcccceeee---------------------eeccc----
Confidence 333444679999999888 9999999985 899999999998777763 34554
Q ss_pred eeEeeecccCceeEEEecCC----CeEEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEEEcCCceEEEEecCCCCeeEE
Q 016446 93 ALFESESLKWPGFVEFDDVN----GKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLIFNRSSSHVPLK 168 (389)
Q Consensus 93 ~l~~~~~~~~~~~v~Fs~pd----G~~Las~s~D~tiklWdl~~g~~l~tl~~~~V~~vafS~g~~la~~~~~s~d~tik 168 (389)
....+.+++|| || ++++++++. ++++|++.+|+++.+ +..+.|++|+
T Consensus 110 ------~~~~v~sla~s-pd~~~~~~~l~s~g~--~~~v~~l~~g~lv~s--------------------s~~g~d~~V~ 160 (356)
T 2w18_A 110 ------EIREIRALFCS-SDDESEKQVLLKSGN--IKAVLGLTKRRLVSS--------------------SGTLSDQQVE 160 (356)
T ss_dssp ------SEEEEEEECC-------CCEEEEEEEE--EEEEEEETTTEEEEE--------------------ESSSTTCEEE
T ss_pred ------cccceEEEEEC-CCccccccEEEeCCC--eEEEEecCCCcEEEe--------------------cccCCCCcEE
Confidence 11234679998 99 999999884 488998766554333 2334568999
Q ss_pred EEEc-CCCeEEEEEeecCCceeEEEEEec--CCCeEEEEeCCCcEEEEECCCCeEEEEcccCCC---ceEEEEEcCCCcE
Q 016446 169 ILSI-EDGTVLKVFYHLLHRNKKVDFIEQ--FNEKLLVKQENENLQILDVRNAELMEVSRTEFM---TPSAFIFLYENQL 242 (389)
Q Consensus 169 lWd~-~tG~~l~tl~~~~~~~~~v~f~~~--~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~---~v~sv~fspdg~~ 242 (389)
+|++ ++|+.+.++.+|...+..++|++. +++.|++++.|+||||||+++|++++++.+|.. .+..++|+|||++
T Consensus 161 ~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~ 240 (356)
T 2w18_A 161 VMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLL 240 (356)
T ss_dssp EEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEE
T ss_pred EEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCE
Confidence 9999 569999999999999999999953 457888899999999999999999999987654 6777899999998
Q ss_pred E------------EEEc-CCeEEEEeCC-CcEEEEe-----ccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCC
Q 016446 243 F------------LTFR-NRTVAVWNFR-GELVTSF-----EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEG 303 (389)
Q Consensus 243 l------------aS~s-D~tIklWd~~-G~~l~tl-----~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s 303 (389)
+ +|++ |+|||+||.. |+++.++ .||... +.+..+ +|.++|||+.|
T Consensus 241 lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~-----~lsg~~--sg~~lASgS~D--------- 304 (356)
T 2w18_A 241 FIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGR-----FLEGDV--KDHCAAAILTS--------- 304 (356)
T ss_dssp EEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCC-----EEEEEE--ETTEEEEEETT---------
T ss_pred EEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcce-----eEcccc--CCCEEEEEcCC---------
Confidence 7 6678 9999999997 9988877 477643 334444 49999999875
Q ss_pred CCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCc
Q 016446 304 SAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGL 383 (389)
Q Consensus 304 ~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~t 383 (389)
+||||||+.+|+|+++|++|.+ ..+.+|+|||||++|||||.|++
T Consensus 305 --gTIkIWDl~tGk~l~tL~gH~~---------------------------------~vvs~vafSPDG~~LaSGS~D~T 349 (356)
T 2w18_A 305 --GTIAIWDLLLGQCTALLPPVSD---------------------------------QHWSFVKWSGTDSHLLAGQKDGN 349 (356)
T ss_dssp --SCEEEEETTTCSEEEEECCC-----------------------------------CCCCEEEECSSSSEEEEECTTSC
T ss_pred --CcEEEEECCCCcEEEEecCCCC---------------------------------CeEEEEEECCCCCEEEEEECCCc
Confidence 9999999999999999999983 23446999999999999999999
Q ss_pred EEEcc
Q 016446 384 VHVWS 388 (389)
Q Consensus 384 IrlW~ 388 (389)
|||||
T Consensus 350 IklWd 354 (356)
T 2w18_A 350 IFVYH 354 (356)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99998
No 61
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.1e-42 Score=325.31 Aligned_cols=278 Identities=9% Similarity=0.079 Sum_probs=228.9
Q ss_pred cccEEEEEee---ccEEEEEecCceEEEEecccc-----eeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCccee
Q 016446 3 RTKVIEIVAA---RDIVFALAHSGVCAAFSRETN-----RRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLK 74 (389)
Q Consensus 3 ~~~v~~i~~~---~~~~a~~~~~gtiklW~~~tg-----~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~ 74 (389)
+..|.+|.|+ +++||+++.||+|||||+.++ .+++++.+|. ..|.+++|+|||+.|+++ +.|
T Consensus 38 ~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~-~~V~~~~~s~dg~~l~s~----~~d----- 107 (340)
T 4aow_A 38 NGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS-HFVSDVVISSDGQFALSG----SWD----- 107 (340)
T ss_dssp SSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCS-SCEEEEEECTTSSEEEEE----ETT-----
T ss_pred cCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCC-CCEEEEEECCCCCEEEEE----ccc-----
Confidence 3579999998 579999999999999998654 4678888874 899999999999999994 577
Q ss_pred eeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEE-ec--CCcEEEEEEcC
Q 016446 75 CRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS-IS--DKHVQEIKISP 151 (389)
Q Consensus 75 ~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~t-l~--~~~V~~vafS~ 151 (389)
..+++|+...+... .........+..+.|+ |++++|++++.|+.+++||+........ +. ...|..++|++
T Consensus 108 -~~i~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~ 181 (340)
T 4aow_A 108 -GTLRLWDLTTGTTT----RRFVGHTKDVLSVAFS-SDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 181 (340)
T ss_dssp -SEEEEEETTTTEEE----EEEECCSSCEEEEEEC-TTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECS
T ss_pred -ccceEEeeccccee----eeecCCCCceeEEEEe-ecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEcc
Confidence 78888987666531 1112233334557886 8999999999999999999876654332 22 46899999993
Q ss_pred ---CceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCC
Q 016446 152 ---GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEF 228 (389)
Q Consensus 152 ---g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~ 228 (389)
...++++ +.|++|++||+++++++.++.+|...+.+|+|+ |++.++++++.|++|+|||+.+++++..+.+|
T Consensus 182 ~~~~~~~~s~---~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s-~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~- 256 (340)
T 4aow_A 182 NSSNPIIVSC---GWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVS-PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG- 256 (340)
T ss_dssp CSSSCEEEEE---ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTCEEEEEETTTTEEEEEEECS-
T ss_pred CCCCcEEEEE---cCCCEEEEEECCCCceeeEecCCCCcEEEEEEC-CCCCEEEEEeCCCeEEEEEeccCceeeeecCC-
Confidence 3455554 456899999999999999999999999999998 78899999999999999999999999998876
Q ss_pred CceEEEEEcCCCcEEEEEcCCeEEEEeCC-CcEEEEec---------cCcCCcCCCCeeEEEECCCCCEEEEEecCCCcc
Q 016446 229 MTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFE---------DHLLWHPDCNTNNIYITSDQDLIISYCKAEPED 298 (389)
Q Consensus 229 ~~v~sv~fspdg~~laS~sD~tIklWd~~-G~~l~tl~---------gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~ 298 (389)
..|.+++|+|++.+++++.|++|+|||++ +.++.+++ +|... |++++|||||++||||+.|
T Consensus 257 ~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~l~~s~dg~~l~sgs~D---- 327 (340)
T 4aow_A 257 DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQ-----CTSLAWSADGQTLFAGYTD---- 327 (340)
T ss_dssp SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCC-----EEEEEECTTSSEEEEEETT----
T ss_pred ceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCC-----EEEEEECCCCCEEEEEeCC----
Confidence 47999999999998877779999999997 67777665 45544 8999999999999999875
Q ss_pred cccCCCCCeEEEEeCCCCe
Q 016446 299 QWMEGSAGSINVSSILTGK 317 (389)
Q Consensus 299 ~~~~s~D~tIklWd~~tg~ 317 (389)
|+|||||++||+
T Consensus 328 -------g~v~iW~~~tGt 339 (340)
T 4aow_A 328 -------NLVRVWQVTIGT 339 (340)
T ss_dssp -------SCEEEEEEEC--
T ss_pred -------CEEEEEeCCCcC
Confidence 999999999986
No 62
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.9e-42 Score=364.97 Aligned_cols=278 Identities=13% Similarity=0.119 Sum_probs=241.8
Q ss_pred cccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 3 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
...|..|.|+ +++||+++.||+|++|+..+|++++++.+|. ..|.+++|+|+|+.|+++ +.| ..+++
T Consensus 13 ~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~----~~d------g~i~v 81 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTE-TPVRAGKFIARKNWIIVG----SDD------FRIRV 81 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCS-SCEEEEEEEGGGTEEEEE----ETT------SEEEE
T ss_pred CCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCC-CcEEEEEEeCCCCEEEEE----eCC------CeEEE
Confidence 4679999999 9999999999999999999999999999875 899999999999999994 567 78999
Q ss_pred eEeccCCCCCcceeEe-eecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCC-eEEEEec--CCcEEEEEEcC--Cce
Q 016446 81 EYIRRGKPDSGFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY-TMLYSIS--DKHVQEIKISP--GIM 154 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g-~~l~tl~--~~~V~~vafS~--g~~ 154 (389)
|++.+|+. +.. ..+...+.+++|+ |+|++|++++.|++|++||+.++ .+...+. ...|.+++|+| +..
T Consensus 82 w~~~~~~~-----~~~~~~~~~~v~~~~~s-~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 82 FNYNTGEK-----VVDFEAHPDYIRSIAVH-PTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155 (814)
T ss_dssp EETTTCCE-----EEEEECCSSCEEEEEEC-SSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEE
T ss_pred EECCCCcE-----EEEEecCCCCEEEEEEe-CCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCE
Confidence 99998876 222 2355667889998 89999999999999999999887 5666664 57899999997 567
Q ss_pred EEEEecCCCCeeEEEEEcCCCeEEEEEeecC-CceeEEEEEec-CCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceE
Q 016446 155 LLIFNRSSSHVPLKILSIEDGTVLKVFYHLL-HRNKKVDFIEQ-FNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPS 232 (389)
Q Consensus 155 la~~~~~s~d~tiklWd~~tG~~l~tl~~~~-~~~~~v~f~~~-~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~ 232 (389)
|++++ .|++|++||+.+++...++..+. ..+..++|++. ++..+++++.|++|++||+.+++++.++.+|...|.
T Consensus 156 l~~~~---~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~ 232 (814)
T 3mkq_A 156 FASGC---LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVS 232 (814)
T ss_dssp EEEEE---TTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEE
T ss_pred EEEEe---CCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEE
Confidence 77764 45899999999999998888554 78899999832 678899999999999999999999999999999999
Q ss_pred EEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCC--EEEEEecCCCcccccCCCCCeE
Q 016446 233 AFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD--LIISYCKAEPEDQWMEGSAGSI 308 (389)
Q Consensus 233 sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~--~laS~s~D~~~~~~~~s~D~tI 308 (389)
+++|+|+|++|++++ ||+|++||+. ++++.++..|... |++++|+|+|+ ++++++. +.+
T Consensus 233 ~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~~~~~~~------------~~~ 295 (814)
T 3mkq_A 233 FAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLER-----SWCIATHPTGRKNYIASGFD------------NGF 295 (814)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSS-----EEEEEECTTCGGGEEEEEET------------TEE
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCc-----EEEEEEccCCCceEEEEEeC------------CCE
Confidence 999999999999999 9999999997 9999999998776 89999999998 6777653 678
Q ss_pred EEEeCCCCe
Q 016446 309 NVSSILTGK 317 (389)
Q Consensus 309 klWd~~tg~ 317 (389)
.+|++..+.
T Consensus 296 ~~~~~~~~~ 304 (814)
T 3mkq_A 296 TVLSLGNDE 304 (814)
T ss_dssp EEEECSCCS
T ss_pred EEEEcCCCC
Confidence 899876543
No 63
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.8e-44 Score=343.19 Aligned_cols=235 Identities=13% Similarity=0.168 Sum_probs=201.7
Q ss_pred cccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCe--EEEEec--CCcEEEEEEc-C--CceEEEEecCCCCeeEEEEE
Q 016446 99 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT--MLYSIS--DKHVQEIKIS-P--GIMLLIFNRSSSHVPLKILS 171 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~--~l~tl~--~~~V~~vafS-~--g~~la~~~~~s~d~tiklWd 171 (389)
|...+.+|+|+ |||++||+|+.|++|||||+.+++ ++.++. ...|++|+|+ | |.+||+++ .|++|+|||
T Consensus 12 H~~~V~~v~~s-~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s---~D~~v~iWd 87 (316)
T 3bg1_A 12 HEDMIHDAQMD-YYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCS---YDRKVIIWR 87 (316)
T ss_dssp --CCEEEEEEC-GGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEE---TTSCEEEEC
T ss_pred ccCeEEEeeEc-CCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEE---CCCEEEEEE
Confidence 44567789998 899999999999999999998875 456665 5689999998 4 78998874 568999999
Q ss_pred cCCC--eEEEEEeecCCceeEEEEEecC--CCeEEEEeCCCcEEEEECCCCe---EEEEcccCCCceEEEEEcCC-----
Q 016446 172 IEDG--TVLKVFYHLLHRNKKVDFIEQF--NEKLLVKQENENLQILDVRNAE---LMEVSRTEFMTPSAFIFLYE----- 239 (389)
Q Consensus 172 ~~tG--~~l~tl~~~~~~~~~v~f~~~~--~~~l~~~s~D~tIklWd~~tg~---~~~~l~gh~~~v~sv~fspd----- 239 (389)
+++| +++.++.+|...+.+|+|+ |+ +..|++++.|++|+|||++++. +...+.+|...|.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~-p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWA-PHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEEC-CTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred CCCCcceEEEEccCCCCceEEEEEC-CCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence 9998 4778888999999999998 54 5688889999999999998763 35678899999999999998
Q ss_pred ------------CcEEEEEc-CCeEEEEeCC-C---cEEEEeccCcCCcCCCCeeEEEECCCC----CEEEEEecCCCcc
Q 016446 240 ------------NQLFLTFR-NRTVAVWNFR-G---ELVTSFEDHLLWHPDCNTNNIYITSDQ----DLIISYCKAEPED 298 (389)
Q Consensus 240 ------------g~~laS~s-D~tIklWd~~-G---~~l~tl~gh~~~~~~~~v~sv~fSpdG----~~laS~s~D~~~~ 298 (389)
+++||+++ |++|||||++ + +++.+|++|..+ |++|+|+|++ ++|||+|.|
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~-----V~~v~~sp~~~~~~~~las~s~D---- 237 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDW-----VRDVAWAPSIGLPTSTIASCSQD---- 237 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSC-----EEEEECCCCSSCSCCEEEEEETT----
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCc-----eEEEEecCCCCCCCceEEEEcCC----
Confidence 57999999 9999999996 4 478899999987 8999999997 899999875
Q ss_pred cccCCCCCeEEEEeCCCC---e-EEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCE
Q 016446 299 QWMEGSAGSINVSSILTG---K-CLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNE 374 (389)
Q Consensus 299 ~~~~s~D~tIklWd~~tg---~-~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~ 374 (389)
++|||||+.++ + ....+.+|+ ..|++|+|||||++
T Consensus 238 -------~~v~iw~~~~~~~~~~~~~~~~~~~----------------------------------~~v~~v~~sp~g~~ 276 (316)
T 3bg1_A 238 -------GRVFIWTCDDASSNTWSPKLLHKFN----------------------------------DVVWHVSWSITANI 276 (316)
T ss_dssp -------CEEEEEECSSTTCCCCBCCEEEECS----------------------------------SCEEEEEECTTTCC
T ss_pred -------CeEEEEEccCccccchhhhhhhcCC----------------------------------CcEEEEEEcCCCCE
Confidence 99999998762 2 234556676 58999999999999
Q ss_pred EEEecCCCcEEEcc
Q 016446 375 IYTGNRHGLVHVWS 388 (389)
Q Consensus 375 LaSgs~D~tIrlW~ 388 (389)
||+|+.|++||||+
T Consensus 277 las~~~D~~v~lw~ 290 (316)
T 3bg1_A 277 LAVSGGDNKVTLWK 290 (316)
T ss_dssp EEEEESSSCEEEEE
T ss_pred EEEEcCCCeEEEEE
Confidence 99999999999997
No 64
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.7e-42 Score=332.02 Aligned_cols=306 Identities=12% Similarity=0.057 Sum_probs=238.8
Q ss_pred ecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEe
Q 016446 40 NVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYS 119 (389)
Q Consensus 40 ~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~ 119 (389)
..| .+.|.+++|+|+|+.|++ ++.| ..+++|++..++..... .+ ..+...+.+++|+ |+|++|+++
T Consensus 5 ~~~-~~~i~~~~~s~~~~~l~~----~~~d------~~v~i~~~~~~~~~~~~-~~-~~h~~~v~~~~~~-~~~~~l~~~ 70 (372)
T 1k8k_C 5 SFL-VEPISCHAWNKDRTQIAI----CPNN------HEVHIYEKSGNKWVQVH-EL-KEHNGQVTGVDWA-PDSNRIVTC 70 (372)
T ss_dssp ESC-SSCCCEEEECTTSSEEEE----ECSS------SEEEEEEEETTEEEEEE-EE-ECCSSCEEEEEEE-TTTTEEEEE
T ss_pred ccc-CCCeEEEEECCCCCEEEE----EeCC------CEEEEEeCCCCcEEeee-ee-cCCCCcccEEEEe-CCCCEEEEE
Confidence 344 589999999999999998 5567 88999999887521011 11 2355567889998 899999999
Q ss_pred cCCCeEEEEeCCCCeEEEEe----cCCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCe---EEEEE-eecCCceeE
Q 016446 120 AQDSIYKVFDLKNYTMLYSI----SDKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGT---VLKVF-YHLLHRNKK 190 (389)
Q Consensus 120 s~D~tiklWdl~~g~~l~tl----~~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~---~l~tl-~~~~~~~~~ 190 (389)
+.|++|++||+.++++...+ +...|.+++|+ ++.+|++++ .|++|++||+.+++ +...+ ..|...+..
T Consensus 71 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~ 147 (372)
T 1k8k_C 71 GTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGS---GSRVISICYFEQENDWWVCKHIKKPIRSTVLS 147 (372)
T ss_dssp ETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEE---TTSSEEEEEEETTTTEEEEEEECTTCCSCEEE
T ss_pred cCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEe---CCCEEEEEEecCCCcceeeeeeecccCCCeeE
Confidence 99999999999999865443 35689999999 688888874 45899999999987 34444 467889999
Q ss_pred EEEEecCCCeEEEEeCCCcEEEEEC------------------CCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeE
Q 016446 191 VDFIEQFNEKLLVKQENENLQILDV------------------RNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTV 251 (389)
Q Consensus 191 v~f~~~~~~~l~~~s~D~tIklWd~------------------~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tI 251 (389)
++|+ |++..+++++.|++|++||+ .+++++..+.+|...|.+++|+|++++|++++ |++|
T Consensus 148 ~~~~-~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 226 (372)
T 1k8k_C 148 LDWH-PNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTV 226 (372)
T ss_dssp EEEC-TTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEE
T ss_pred EEEc-CCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEE
Confidence 9998 67889999999999999995 47899999999999999999999999999998 9999
Q ss_pred EEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCC--C--eEEEEecCCC
Q 016446 252 AVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILT--G--KCLAKINATN 326 (389)
Q Consensus 252 klWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~t--g--~~l~tl~gH~ 326 (389)
++||+. ++++.++.+|..+ |.+++|+|||++|++| . |++|++||+.+ | +++.++..++
T Consensus 227 ~i~d~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~-~-----------d~~i~i~~~~~~~~~~~~~~~~~~~~ 289 (372)
T 1k8k_C 227 CLADADKKMAVATLASETLP-----LLAVTFITESSLVAAG-H-----------DCFPVLFTYDSAAGKLSFGGRLDVPK 289 (372)
T ss_dssp EEEEGGGTTEEEEEECSSCC-----EEEEEEEETTEEEEEE-T-----------TSSCEEEEEETTTTEEEECCCCCCC-
T ss_pred EEEECCCCceeEEEccCCCC-----eEEEEEecCCCEEEEE-e-----------CCeEEEEEccCcCceEEEeeccCccc
Confidence 999996 9999999999876 8999999999999987 4 48999999988 6 4455554443
Q ss_pred CCCCcccccCCCCCCCccccc----cccce-------ecccccccCCEEEEEE-CCCC---CEEEEecCCCcEEEcc
Q 016446 327 CSPKVDDELGSSSTGKSKKLN----KSSYI-------RSTVGEALEDITSLFY-DEER---NEIYTGNRHGLVHVWS 388 (389)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~----~~~~~-------~~~~~~~~~~V~svaf-Spdg---~~LaSgs~D~tIrlW~ 388 (389)
.... . .....+.+ ..... .....+|...|++++| +||| ++|+||+.||+|++|+
T Consensus 290 ~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~ 358 (372)
T 1k8k_C 290 QSSQ-------R-GLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 358 (372)
T ss_dssp ---------------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEE
T ss_pred cchh-------h-hcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEE
Confidence 1100 0 00000000 00000 1112366689999984 5888 9999999999999997
No 65
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.1e-42 Score=343.86 Aligned_cols=273 Identities=11% Similarity=0.127 Sum_probs=232.8
Q ss_pred EEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe-eecccCceeEEEecCCCeEEEEecCCCeE
Q 016446 47 IRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIY 125 (389)
Q Consensus 47 v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~ti 125 (389)
.+.|+||+++ .||. | .| .+|+|||+.+|++ ..++. +++...|.+|+|+ |||++||+|+.|++|
T Consensus 108 ~~~l~wS~~n-~lAv----g-ld------~tV~lWd~~tg~~---~~~~~~~~~~~~V~sv~fs-pdg~~lasgs~Dg~v 171 (420)
T 4gga_A 108 LNLVDWSSGN-VLAV----A-LD------NSVYLWSASSGDI---LQLLQMEQPGEYISSVAWI-KEGNYLAVGTSSAEV 171 (420)
T ss_dssp CBCEEECTTS-EEEE----E-ET------TEEEEEETTTCCE---EEEEECCSTTCCEEEEEEC-TTSSEEEEEETTSCE
T ss_pred ceeEEECCCC-EEEE----E-eC------CEEEEEECCCCCE---EEEEEecCCCCcEEEEEEC-CCCCEEEEEECCCeE
Confidence 5679999864 6666 2 35 7999999999986 23444 4566678899998 899999999999999
Q ss_pred EEEeCCCCeEEEEecC--CcEEEEEEcCCceEEEEecCCCCeeEEEEEcCC-CeEEEEEeecCCceeEEEEEecCCCeEE
Q 016446 126 KVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIED-GTVLKVFYHLLHRNKKVDFIEQFNEKLL 202 (389)
Q Consensus 126 klWdl~~g~~l~tl~~--~~V~~vafS~g~~la~~~~~s~d~tiklWd~~t-G~~l~tl~~~~~~~~~v~f~~~~~~~l~ 202 (389)
+|||+++++++.++.+ ..|.+++++ +..|+++ +.|+++++||..+ ...+.++.+|...+..+.+. |++..++
T Consensus 172 ~iWd~~~~~~~~~~~~h~~~v~~~s~~-~~~l~sg---s~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~-~~g~~l~ 246 (420)
T 4gga_A 172 QLWDVQQQKRLRNMTSHSARVGSLSWN-SYILSSG---SRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWA-PDGRHLA 246 (420)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEE-TTEEEEE---ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC-TTSSEEE
T ss_pred EEEEcCCCcEEEEEeCCCCceEEEeeC-CCEEEEE---eCCCceeEeeecccceeeEEecccccceeeeeec-CCCCeee
Confidence 9999999999988874 567776664 5677776 4458999999886 45678899999999999997 7789999
Q ss_pred EEeCCCcEEEEECCCCe----EEEEcccCCCceEEEEEcCCC-cEEEE--Ec-CCeEEEEeCC-CcEEEEeccCcCCcCC
Q 016446 203 VKQENENLQILDVRNAE----LMEVSRTEFMTPSAFIFLYEN-QLFLT--FR-NRTVAVWNFR-GELVTSFEDHLLWHPD 273 (389)
Q Consensus 203 ~~s~D~tIklWd~~tg~----~~~~l~gh~~~v~sv~fspdg-~~laS--~s-D~tIklWd~~-G~~l~tl~gh~~~~~~ 273 (389)
+++.|++|+|||..+++ .++....|...|.+++|+|++ .++++ |+ |++||+||+. |+++..+..|..
T Consensus 247 s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~---- 322 (420)
T 4gga_A 247 SGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ---- 322 (420)
T ss_dssp EEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSC----
T ss_pred eeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccc----
Confidence 99999999999999876 366778999999999999965 45555 35 9999999997 999999987754
Q ss_pred CCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCcccccccccee
Q 016446 274 CNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIR 353 (389)
Q Consensus 274 ~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (389)
|.++.|+|+++.|++++. +.|++|+|||+.+++++.+|.||+
T Consensus 323 --v~~~~~~~~~~~lv~~sg---------~~d~~I~iwd~~~~~~v~~l~gH~--------------------------- 364 (420)
T 4gga_A 323 --VCSILWSPHYKELISGHG---------FAQNQLVIWKYPTMAKVAELKGHT--------------------------- 364 (420)
T ss_dssp --EEEEEEETTTTEEEEEEC---------TTTCCEEEEETTTCCEEEEECCCS---------------------------
T ss_pred --eeeeeecCCCCeEEEEEe---------cCCCEEEEEECCCCcEEEEEcCCC---------------------------
Confidence 789999999999999863 357999999999999999999998
Q ss_pred cccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 354 STVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 354 ~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
..|++|+|||||++|||||.|++|||||.
T Consensus 365 -------~~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 365 -------SRVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp -------SCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred -------CCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 59999999999999999999999999984
No 66
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-44 Score=348.32 Aligned_cols=282 Identities=10% Similarity=0.085 Sum_probs=238.5
Q ss_pred ceEEEEEEeeCCC-EEEEEEEee------cCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEE
Q 016446 45 EVIRSLFYNKNND-SLITVSVYA------SDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLT 117 (389)
Q Consensus 45 ~~v~sv~~spdg~-~l~s~s~~~------~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~La 117 (389)
+.|.+++|||+|+ .|+++...+ +.| ..++||++..++... .+....+...+.+++|+ |||++||
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d------~~v~iw~~~~~~~~~--~~~~~~~~~~v~~~~~s-~~~~~l~ 83 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTD------SSLELWSLLAADSEK--PIASLQVDSKFNDLDWS-HNNKIIA 83 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCC------CCCEEEESSSGGGCS--CSCCCCCSSCEEEEEEC-SSSSCEE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCC------CeEEEEEccCCCCCc--EEEEEecCCceEEEEEC-CCCCeEE
Confidence 4678899999998 888853333 677 889999998775321 12222344557789998 8999999
Q ss_pred EecCCCeEEEEeCCC----CeEEEEec--CCcEEEEEEcC--CceEEEEecCCCCeeEEEEEcCCCe------EEEE---
Q 016446 118 YSAQDSIYKVFDLKN----YTMLYSIS--DKHVQEIKISP--GIMLLIFNRSSSHVPLKILSIEDGT------VLKV--- 180 (389)
Q Consensus 118 s~s~D~tiklWdl~~----g~~l~tl~--~~~V~~vafS~--g~~la~~~~~s~d~tiklWd~~tG~------~l~t--- 180 (389)
+++.|++|+|||+.+ .+++.++. ...|.+++|+| +.+|+++ +.|++|++||+.+++ ....
T Consensus 84 ~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~---~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 160 (416)
T 2pm9_A 84 GALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASG---GNNGEIFIWDMNKCTESPSNYTPLTPGQ 160 (416)
T ss_dssp EEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEE---CSSSCEEBCBTTTTSSCTTTCCCBCCCC
T ss_pred EEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEE---cCCCeEEEEECCCCcccccccccccccc
Confidence 999999999999987 34777775 46899999994 6788776 456899999999987 3333
Q ss_pred EeecCCceeEEEEEecC-CCeEEEEeCCCcEEEEECCCCeEEEEcccC------CCceEEEEEcCCC-cEEEEEc-CC--
Q 016446 181 FYHLLHRNKKVDFIEQF-NEKLLVKQENENLQILDVRNAELMEVSRTE------FMTPSAFIFLYEN-QLFLTFR-NR-- 249 (389)
Q Consensus 181 l~~~~~~~~~v~f~~~~-~~~l~~~s~D~tIklWd~~tg~~~~~l~gh------~~~v~sv~fspdg-~~laS~s-D~-- 249 (389)
+..|...+..++|+ |+ +..+++++.|++|++||+++++++..+..| ...|.+++|+|++ ++|++++ |+
T Consensus 161 ~~~~~~~v~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~ 239 (416)
T 2pm9_A 161 SMSSVDEVISLAWN-QSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND 239 (416)
T ss_dssp SCCSSCCCCEEEEC-SSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS
T ss_pred ccCCCCCeeEEEeC-CCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCC
Confidence 36788899999998 55 677888899999999999999999998877 7899999999997 6899998 88
Q ss_pred -eEEEEeCC-C-cEEEEec-cCcCCcCCCCeeEEEECC-CCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecC
Q 016446 250 -TVAVWNFR-G-ELVTSFE-DHLLWHPDCNTNNIYITS-DQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 324 (389)
Q Consensus 250 -tIklWd~~-G-~~l~tl~-gh~~~~~~~~v~sv~fSp-dG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~g 324 (389)
+|++||++ + +++.++. +|... |.+++|+| ||++|++++.| ++|+|||+.+++++.++.+
T Consensus 240 ~~i~~~d~~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~~l~s~~~d-----------g~v~~wd~~~~~~~~~~~~ 303 (416)
T 2pm9_A 240 PSILIWDLRNANTPLQTLNQGHQKG-----ILSLDWCHQDEHLLLSSGRD-----------NTVLLWNPESAEQLSQFPA 303 (416)
T ss_dssp CCCCEEETTSTTSCSBCCCSCCSSC-----EEEEEECSSCSSCEEEEESS-----------SEEEEECSSSCCEEEEEEC
T ss_pred ceEEEEeCCCCCCCcEEeecCccCc-----eeEEEeCCCCCCeEEEEeCC-----------CCEEEeeCCCCccceeecC
Confidence 99999996 5 6888898 89876 89999999 99999999875 9999999999999999999
Q ss_pred CCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCC-CEEEEecCCCcEEEccC
Q 016446 325 TNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEER-NEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 325 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg-~~LaSgs~D~tIrlW~~ 389 (389)
|. ..|++++|+||| ++||+++.|++|++|+.
T Consensus 304 ~~----------------------------------~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~ 335 (416)
T 2pm9_A 304 RG----------------------------------NWCFKTKFAPEAPDLFACASFDNKIEVQTL 335 (416)
T ss_dssp SS----------------------------------SCCCCEEECTTCTTEEEECCSSSEEEEEES
T ss_pred CC----------------------------------CceEEEEECCCCCCEEEEEecCCcEEEEEc
Confidence 98 589999999999 89999999999999984
No 67
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8.7e-43 Score=336.64 Aligned_cols=307 Identities=12% Similarity=0.166 Sum_probs=250.0
Q ss_pred ecCceEEEEecccceeeeeeecCCcceEEEEEEee-CCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe--
Q 016446 20 AHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNK-NNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-- 96 (389)
Q Consensus 20 ~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~sp-dg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~-- 96 (389)
+.++++++|+.++++....+.+|. +.|.+++|+| +|+.||+ ++.| ..+++|++..++.........
T Consensus 20 ~~~~~~~v~~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~~l~~----~~~d------g~i~iw~~~~~~~~~~~~~~~~~ 88 (408)
T 4a11_B 20 RAESTRRVLGLELNKDRDVERIHG-GGINTLDIEPVEGRYMLS----GGSD------GVIVLYDLENSSRQSYYTCKAVC 88 (408)
T ss_dssp HHHHHHHHHTEEECTTEEECCCCS-SCEEEEEECTTTCCEEEE----EETT------SCEEEEECCCCSSSSCEEECEEE
T ss_pred eccCcceeeccccCcceeeeeccC-CcEEEEEEecCCCCEEEE----EcCC------CeEEEEECCCCcccceEeccccc
Confidence 346788999999999999998864 9999999999 9999999 4567 789999998887633221100
Q ss_pred -------eecccCceeEEEecC-CCeEEEEecCCCeEEEEeCCCCeEEEEec-CCcEEEEEEcC----CceEEEEecCCC
Q 016446 97 -------SESLKWPGFVEFDDV-NGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISP----GIMLLIFNRSSS 163 (389)
Q Consensus 97 -------~~~~~~~~~v~Fs~p-dG~~Las~s~D~tiklWdl~~g~~l~tl~-~~~V~~vafS~----g~~la~~~~~s~ 163 (389)
..+...+.+++|+ | ++++|++++.|++|++||+.+++++..+. ...+.+++|+| +.++++++ .
T Consensus 89 ~~~~~~~~~~~~~v~~~~~~-~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 164 (408)
T 4a11_B 89 SIGRDHPDVHRYSVETVQWY-PHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGT---R 164 (408)
T ss_dssp EECTTCTTCCSSCEEEEEEC-TTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEE---S
T ss_pred cccccccccCCCcEEEEEEc-cCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEc---C
Confidence 1255567889998 6 88899999999999999999999988876 57899999994 33777764 4
Q ss_pred CeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCe-EEEEeCCCcEEEEECCCCe-EEEEc---------------cc
Q 016446 164 HVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEK-LLVKQENENLQILDVRNAE-LMEVS---------------RT 226 (389)
Q Consensus 164 d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~-l~~~s~D~tIklWd~~tg~-~~~~l---------------~g 226 (389)
|+.|++||+.+++++.++..|...+..++|+ |++.. +++++.|++|++||+++++ ++..+ .+
T Consensus 165 ~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (408)
T 4a11_B 165 GPKVQLCDLKSGSCSHILQGHRQEILAVSWS-PRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTA 243 (408)
T ss_dssp SSSEEEEESSSSCCCEEECCCCSCEEEEEEC-SSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCS
T ss_pred CCeEEEEeCCCcceeeeecCCCCcEEEEEEC-CCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccccc
Confidence 5799999999999999999999999999998 66664 7788999999999999876 55555 68
Q ss_pred CCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCe-eEEEECCCCCEEEEEecCCCcccccCC
Q 016446 227 EFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNT-NNIYITSDQDLIISYCKAEPEDQWMEG 303 (389)
Q Consensus 227 h~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v-~sv~fSpdG~~laS~s~D~~~~~~~~s 303 (389)
|...|.+++|+|+|++|++++ |++|++||+. ++.+..+.++........+ ..+...+.+.+++ ++.
T Consensus 244 ~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------- 312 (408)
T 4a11_B 244 HNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVF-VPY---------- 312 (408)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEE-EEE----------
T ss_pred ccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEE-Eec----------
Confidence 999999999999999999998 9999999997 8876666554322111111 2333333444444 444
Q ss_pred CCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCc
Q 016446 304 SAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGL 383 (389)
Q Consensus 304 ~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~t 383 (389)
|++|++||+.+++++.++.+|. ..|++++|+|||+.||+|+.||+
T Consensus 313 -~~~i~v~d~~~~~~~~~~~~~~----------------------------------~~v~~~~~s~~~~~l~s~~~dg~ 357 (408)
T 4a11_B 313 -GSTIAVYTVYSGEQITMLKGHY----------------------------------KTVDCCVFQSNFQELYSGSRDCN 357 (408)
T ss_dssp -TTEEEEEETTTCCEEEEECCCS----------------------------------SCEEEEEEETTTTEEEEEETTSC
T ss_pred -CCEEEEEECcCCcceeeeccCC----------------------------------CeEEEEEEcCCCCEEEEECCCCe
Confidence 4899999999999999999998 58999999999999999999999
Q ss_pred EEEcc
Q 016446 384 VHVWS 388 (389)
Q Consensus 384 IrlW~ 388 (389)
|++|+
T Consensus 358 i~iw~ 362 (408)
T 4a11_B 358 ILAWV 362 (408)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99998
No 68
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.8e-43 Score=342.15 Aligned_cols=272 Identities=10% Similarity=0.088 Sum_probs=227.1
Q ss_pred EEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEE
Q 016446 47 IRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYK 126 (389)
Q Consensus 47 v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tik 126 (389)
+.+++|+|+|+.|++++ .| ..+++|++.+++.... +.. + ..+...+|+ |+|++||+|+.|++|+
T Consensus 59 ~~~~~~s~~g~~l~~~~----~d------~~v~i~d~~~~~~~~~--~~~--~-~~~~~~~~~-~~~~~l~~~~~dg~i~ 122 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKAR----LD------GHDFLFNTIIRDGSKM--LKR--A-DYTAVDTAK-LQMRRFILGTTEGDIK 122 (420)
T ss_dssp CTTCEEEEEETTEEEEE----ET------TEEEEEECCSEETTTT--SCS--C-CEEEEEEEC-SSSCEEEEEETTSCEE
T ss_pred ccceeeeecCCeEEEEE----cC------CcEEEEEecccceeeE--Eec--C-CceEEEEEe-cCCCEEEEEECCCCEE
Confidence 45899999999999954 56 7899999987765221 111 1 112235676 8999999999999999
Q ss_pred EEeCCCCeEEEEec--CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEE
Q 016446 127 VFDLKNYTMLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLV 203 (389)
Q Consensus 127 lWdl~~g~~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~ 203 (389)
|||+.+++++..+. ...|.+++|+ ++.+||+++ .|++|++||+.++++++++.+|...+..++|+ |++..+++
T Consensus 123 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s---~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~~l~s 198 (420)
T 3vl1_A 123 VLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSS---QDMQLKIWSVKDGSNPRTLIGHRATVTDIAII-DRGRNVLS 198 (420)
T ss_dssp EECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEE---TTSEEEEEETTTCCCCEEEECCSSCEEEEEEE-TTTTEEEE
T ss_pred EEeCCCcceeeecccccCccEEEEECCCCCEEEEEe---CCCeEEEEeCCCCcCceEEcCCCCcEEEEEEc-CCCCEEEE
Confidence 99999999988874 5789999999 578888774 45899999999999999999999999999998 78899999
Q ss_pred EeCCCcEEEEECCCCeEEEEccc---CCCceEEE---------------------EEcCCCcEEEEEc-CCeEEEEeCC-
Q 016446 204 KQENENLQILDVRNAELMEVSRT---EFMTPSAF---------------------IFLYENQLFLTFR-NRTVAVWNFR- 257 (389)
Q Consensus 204 ~s~D~tIklWd~~tg~~~~~l~g---h~~~v~sv---------------------~fspdg~~laS~s-D~tIklWd~~- 257 (389)
++.|++|++||+++++++..+.. |...|.++ +|+|+|++|++++ |++|++||+.
T Consensus 199 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 278 (420)
T 3vl1_A 199 ASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFS 278 (420)
T ss_dssp EETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTT
T ss_pred EcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCC
Confidence 99999999999999999999875 44445544 4579999999998 9999999996
Q ss_pred CcEEEEec-cCcCCcCCCCeeEEEECCCCC-EEEEEecCCCcccccCCCCCeEEEEeCCCCeE-EEEecCCCCCCCcccc
Q 016446 258 GELVTSFE-DHLLWHPDCNTNNIYITSDQD-LIISYCKAEPEDQWMEGSAGSINVSSILTGKC-LAKINATNCSPKVDDE 334 (389)
Q Consensus 258 G~~l~tl~-gh~~~~~~~~v~sv~fSpdG~-~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~-l~tl~gH~~~~~~~~~ 334 (389)
++.+..+. +|... |.+++|+|+|+ +|++|+.| |+|++||+.++++ +.++.+|..
T Consensus 279 ~~~~~~~~~~~~~~-----v~~~~~~~~~~~~l~~g~~d-----------g~i~vwd~~~~~~~~~~~~~~~~------- 335 (420)
T 3vl1_A 279 KEQTIQLPSKFTCS-----CNSLTVDGNNANYIYAGYEN-----------GMLAQWDLRSPECPVGEFLINEG------- 335 (420)
T ss_dssp CCEEEEECCTTSSC-----EEEEEECSSCTTEEEEEETT-----------SEEEEEETTCTTSCSEEEEESTT-------
T ss_pred CceeEEcccccCCC-----ceeEEEeCCCCCEEEEEeCC-----------CeEEEEEcCCCcCchhhhhccCC-------
Confidence 88776665 46655 89999999999 99999865 9999999999865 888988652
Q ss_pred cCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEcc
Q 016446 335 LGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
..|+++.| |+|++|++|+.|++|++|+
T Consensus 336 --------------------------~~v~~~~~-~~~~~l~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 336 --------------------------TPINNVYF-AAGALFVSSGFDTSIKLDI 362 (420)
T ss_dssp --------------------------SCEEEEEE-ETTEEEEEETTTEEEEEEE
T ss_pred --------------------------CCceEEEe-CCCCEEEEecCCccEEEEe
Confidence 57888854 6889999999999999998
No 69
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2e-42 Score=340.79 Aligned_cols=279 Identities=12% Similarity=0.145 Sum_probs=218.4
Q ss_pred cEEEEEee--ccEEEEEecCc-------eEEEEecccceee----------eeeecCCcceEEEEEEeeCCCEEEEEEEe
Q 016446 5 KVIEIVAA--RDIVFALAHSG-------VCAAFSRETNRRI----------CFLNVSPDEVIRSLFYNKNNDSLITVSVY 65 (389)
Q Consensus 5 ~v~~i~~~--~~~~a~~~~~g-------tiklW~~~tg~~l----------~tl~~~~~~~v~sv~~spdg~~l~s~s~~ 65 (389)
.|+++.|+ +++||+++.+. .|++|+.+.+... .+|.++ .+.|.++++ +++.++++..+
T Consensus 16 PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~-~~~v~s~~~--~~~~~~~g~~~ 92 (365)
T 4h5i_A 16 PAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDN-DDSPTAIDA--SKGIILVGCNE 92 (365)
T ss_dssp CEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTT-SCCCCEEEE--ETTEEEEECCC
T ss_pred CEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCC-CCceEEEEe--CCCEEEEEECC
Confidence 59999999 88999987543 5999998654321 245665 478888765 55777774322
Q ss_pred -------ecCCCcceeeeeeeEeEeccCCCCCcceeEe------eecccCceeEEEecCCCeEEE--EecCCCeEEEEeC
Q 016446 66 -------ASDNFSSLKCRSTKIEYIRRGKPDSGFALFE------SESLKWPGFVEFDDVNGKVLT--YSAQDSIYKVFDL 130 (389)
Q Consensus 66 -------~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~------~~~~~~~~~v~Fs~pdG~~La--s~s~D~tiklWdl 130 (389)
++.| ..+++|++..++.. ...+-. ...-.++..|+|| |||++|| |++.|++|||||+
T Consensus 93 ~~~~l~s~~~d------~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~fS-pDg~~la~as~~~d~~i~iwd~ 164 (365)
T 4h5i_A 93 NSTKITQGKGN------KHLRKFKYDKVNDQ-LEFLTSVDFDASTNADDYTKLVYIS-REGTVAAIASSKVPAIMRIIDP 164 (365)
T ss_dssp CHHHHHHTSCC------CCEEEEEEETTTTE-EEEEEEECSSCCCCTTCCEEEEEEC-TTSSCEEEEESCSSCEEEEEET
T ss_pred CccEEEEecCC------CcEEEEEecCCCce-EEEeeeeceeecCCcccCEEEEEEc-CCCCEEEEEECCCCCEEEEeEC
Confidence 2234 67888888665431 000100 1122346679998 9999875 5668999999999
Q ss_pred CCCeEEEEec-CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEE--eecCCceeEEEEEecCCCeEEEEeC
Q 016446 131 KNYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVF--YHLLHRNKKVDFIEQFNEKLLVKQE 206 (389)
Q Consensus 131 ~~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl--~~~~~~~~~v~f~~~~~~~l~~~s~ 206 (389)
+++++++++. ...|.+|+|| +|++||+++ +.++++|+..+|+++... .+|...+..|+|+ |++..+++++.
T Consensus 165 ~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fs-pdg~~l~~~s~ 239 (365)
T 4h5i_A 165 SDLTEKFEIETRGEVKDLHFSTDGKVVAYIT----GSSLEVISTVTGSCIARKTDFDKNWSLSKINFI-ADDTVLIAASL 239 (365)
T ss_dssp TTTEEEEEEECSSCCCEEEECTTSSEEEEEC----SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEE-ETTEEEEEEEE
T ss_pred CCCcEEEEeCCCCceEEEEEccCCceEEecc----ceeEEEEEeccCcceeeeecCCCCCCEEEEEEc-CCCCEEEEEec
Confidence 9999998886 5789999999 588887763 246888888899887654 4677889999999 77888998887
Q ss_pred CC----cEEEEECCCCeE----EEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEE-eccCcCCcCCCC
Q 016446 207 NE----NLQILDVRNAEL----MEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTS-FEDHLLWHPDCN 275 (389)
Q Consensus 207 D~----tIklWd~~tg~~----~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~t-l~gh~~~~~~~~ 275 (389)
|+ ++++||+..+.. ...+.+|...|++++|||||++||+|+ |++|+|||++ |+++++ +++|..+
T Consensus 240 d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~----- 314 (365)
T 4h5i_A 240 KKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFA----- 314 (365)
T ss_dssp SSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSC-----
T ss_pred CCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCC-----
Confidence 76 799999987764 456789999999999999999999999 9999999996 999988 5899987
Q ss_pred eeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCC
Q 016446 276 TNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILT 315 (389)
Q Consensus 276 v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~t 315 (389)
|++|+|||||++|||||.| +||||||+.+
T Consensus 315 V~~v~fSpdg~~laS~S~D-----------~tvrvw~ip~ 343 (365)
T 4h5i_A 315 ITEVTISPDSTYVASVSAA-----------NTIHIIKLPL 343 (365)
T ss_dssp EEEEEECTTSCEEEEEETT-----------SEEEEEECCT
T ss_pred EEEEEECCCCCEEEEEeCC-----------CeEEEEEcCC
Confidence 8999999999999999875 9999999964
No 70
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-43 Score=369.22 Aligned_cols=265 Identities=11% Similarity=0.056 Sum_probs=208.0
Q ss_pred cceeeeeeecCCcceEEEEEEeeCC---------CEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccC
Q 016446 32 TNRRICFLNVSPDEVIRSLFYNKNN---------DSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKW 102 (389)
Q Consensus 32 tg~~l~tl~~~~~~~v~sv~~spdg---------~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~ 102 (389)
++++..+++. ...|++|+|+|++ ++||+++. .+ +.
T Consensus 123 ~~r~~~~~~~--~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~---~~----------------~~--------------- 166 (524)
T 2j04_B 123 GKRRGFIYNV--GGLVTDIAWLNIEENTDIGKDIQYLAVAVS---QY----------------MD--------------- 166 (524)
T ss_dssp CCSCEEEEEC--CC--CCCSCEEECCCCSSCSSEEEEEEEEE---C----------------------------------
T ss_pred CCcceEEEEC--CCceeEEEecccCCCCccCcCCeEEEEEEe---cc----------------cC---------------
Confidence 4667667773 3799999999998 78888542 11 00
Q ss_pred ceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEE----EEec--CCcEEEEEEcC-------CceEEEEecCCCCeeEEE
Q 016446 103 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML----YSIS--DKHVQEIKISP-------GIMLLIFNRSSSHVPLKI 169 (389)
Q Consensus 103 ~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l----~tl~--~~~V~~vafS~-------g~~la~~~~~s~d~tikl 169 (389)
.+++ |++++|||++.|++|||||+.++++. .++. ...|++|+|+| +++||+++ .|++|||
T Consensus 167 ---~~~~-~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s---~Dgtvrl 239 (524)
T 2j04_B 167 ---EPLN-EHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVS---QEGTINF 239 (524)
T ss_dssp -------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEE---TTSCEEE
T ss_pred ---Cccc-hhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEe---cCCeEEE
Confidence 0134 89999999999999999999887742 3343 46899999996 36888764 4689999
Q ss_pred EEcCCCeE-----------EEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCe-EEEEcccCCCceEEE--E
Q 016446 170 LSIEDGTV-----------LKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAE-LMEVSRTEFMTPSAF--I 235 (389)
Q Consensus 170 Wd~~tG~~-----------l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~-~~~~l~gh~~~v~sv--~ 235 (389)
||+.++++ ..++.+|...+.+|+|++ ++.|++|+.|++|+|||+++++ +..++.+|...|.+| +
T Consensus 240 Wd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~--~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~ 317 (524)
T 2j04_B 240 LEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS--PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTA 317 (524)
T ss_dssp EECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS--SSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEE
T ss_pred EEcCCCccccccceeecCceEEEEcCCCCEEEEEecC--CCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEE
Confidence 99988753 247888999999999973 4689999999999999999875 456789999999999 6
Q ss_pred EcCCC-cEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEe
Q 016446 236 FLYEN-QLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSS 312 (389)
Q Consensus 236 fspdg-~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd 312 (389)
|+|+| ++|||++ |++|||||++ ++++.++.+|.... .|++|+|||||+.||+++.| ++|||||
T Consensus 318 ~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~---~v~~v~fsp~~~~l~s~~~d-----------~tv~lwd 383 (524)
T 2j04_B 318 YSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGS---NLVPVVYCPQIYSYIYSDGA-----------SSLRAVP 383 (524)
T ss_dssp CCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCC---SCCCEEEETTTTEEEEECSS-----------SEEEEEE
T ss_pred cCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccC---cccceEeCCCcCeEEEeCCC-----------CcEEEEE
Confidence 79998 9999999 9999999996 89988999887421 26899999999999998764 8999999
Q ss_pred CCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 313 ILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 313 ~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
+.+++|+.+|.+|. ..|++|+|||||++|||||.|++|||||.
T Consensus 384 ~~~~~~~~~l~gH~----------------------------------~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 384 SRAAFAVHPLVSRE----------------------------------TTITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp TTCTTCCEEEEECS----------------------------------SCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred CcccccceeeecCC----------------------------------CceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 99999999999998 59999999999999999999999999983
No 71
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.9e-41 Score=327.54 Aligned_cols=284 Identities=10% Similarity=0.051 Sum_probs=240.1
Q ss_pred cccEEEEEeeccEEEEEecCceEEEEecccce------eeeeeecCCcceEEEEEEeeC----C---CEEEEEEEeecCC
Q 016446 3 RTKVIEIVAARDIVFALAHSGVCAAFSRETNR------RICFLNVSPDEVIRSLFYNKN----N---DSLITVSVYASDN 69 (389)
Q Consensus 3 ~~~v~~i~~~~~~~a~~~~~gtiklW~~~tg~------~l~tl~~~~~~~v~sv~~spd----g---~~l~s~s~~~~~d 69 (389)
+..|..|.|+.++||+++.||+|++|+.++++ ++.++.+|. ..|.+++|+|+ | +.|+++ +.|
T Consensus 16 ~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~g~~~~~l~s~----~~d 90 (397)
T 1sq9_A 16 DADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHK-SGLHHVDVLQAIERDAFELCLVATT----SFS 90 (397)
T ss_dssp SSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCT-TCEEEEEEEEEEETTTEEEEEEEEE----ETT
T ss_pred hcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCC-CcEEEEEEecccccCCccccEEEEE----cCC
Confidence 46899999999999999999999999999888 788999875 89999999999 9 999984 467
Q ss_pred CcceeeeeeeEeEeccCCCCCcceeEe-eec-----ccCceeEEEec---CCCeE-EEEecCCCeEEEEeCCC------C
Q 016446 70 FSSLKCRSTKIEYIRRGKPDSGFALFE-SES-----LKWPGFVEFDD---VNGKV-LTYSAQDSIYKVFDLKN------Y 133 (389)
Q Consensus 70 ~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~-----~~~~~~v~Fs~---pdG~~-Las~s~D~tiklWdl~~------g 133 (389)
..+++|++..++......+.. ..+ ...+.+++|++ |+|++ |++++.|++|++||+.+ +
T Consensus 91 ------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 91 ------GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp ------SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred ------CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 789999998887411111111 123 25678899962 68999 99999999999999988 6
Q ss_pred eEEE-----Ee---------cCCcEEEEEEcCCceEEEEecCCCCeeEEEEEcCCCeEEEEEee---c---CCceeEEEE
Q 016446 134 TMLY-----SI---------SDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH---L---LHRNKKVDF 193 (389)
Q Consensus 134 ~~l~-----tl---------~~~~V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~---~---~~~~~~v~f 193 (389)
+++. ++ +...|.+++|+|..+|+++ +.|++|++||+.+++++.++.. | ...+..++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~---~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~ 241 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATG---FNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKF 241 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEE---CTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEE
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEE---eCCCcEEEEECCCCceeEEEeccccccccCCccceEEE
Confidence 6555 55 3568999999953377765 4568999999999999999998 8 899999999
Q ss_pred EecCCCeEEEEeCC---CcEEEEECCCCeEEEEccc-------------CCCceEEEEEcCCCcEEEEEc-CCeEEEEeC
Q 016446 194 IEQFNEKLLVKQEN---ENLQILDVRNAELMEVSRT-------------EFMTPSAFIFLYENQLFLTFR-NRTVAVWNF 256 (389)
Q Consensus 194 ~~~~~~~l~~~s~D---~tIklWd~~tg~~~~~l~g-------------h~~~v~sv~fspdg~~laS~s-D~tIklWd~ 256 (389)
+ |++..+++++.| ++|++||+++++++..+.+ |...|.+++|+|++++|++++ |++|++||+
T Consensus 242 ~-~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 320 (397)
T 1sq9_A 242 S-PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDV 320 (397)
T ss_dssp C-SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred C-CCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 8 778899999999 9999999999999999999 999999999999999999999 999999999
Q ss_pred C-CcEEEEec------cC---------------cCCcCCCCeeEEEECCCC----------CEEEEEecCCCcccccCCC
Q 016446 257 R-GELVTSFE------DH---------------LLWHPDCNTNNIYITSDQ----------DLIISYCKAEPEDQWMEGS 304 (389)
Q Consensus 257 ~-G~~l~tl~------gh---------------~~~~~~~~v~sv~fSpdG----------~~laS~s~D~~~~~~~~s~ 304 (389)
. ++++.++. +| ... |.+++|+||| ++|++++.|
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----v~~~~~~~~g~~~~~~~~~~~~l~s~~~d---------- 385 (397)
T 1sq9_A 321 KTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG-----VFDVKFLKKGWRSGMGADLNESLCCVCLD---------- 385 (397)
T ss_dssp TTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC-----EEEEEEECTTTSBSTTCTTSCEEEEEETT----------
T ss_pred CCCceeEEEecccCcccchhhhhccccccccccCCc-----eeEEEeccccccccccccccceEEEecCC----------
Confidence 6 99999999 77 655 8999999999 799999865
Q ss_pred CCeEEEEeCCCCe
Q 016446 305 AGSINVSSILTGK 317 (389)
Q Consensus 305 D~tIklWd~~tg~ 317 (389)
|+|+|||+.+|+
T Consensus 386 -g~i~iw~~~~g~ 397 (397)
T 1sq9_A 386 -RSIRWFREAGGK 397 (397)
T ss_dssp -TEEEEEEEEC--
T ss_pred -CcEEEEEcCCCC
Confidence 999999998875
No 72
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4e-43 Score=339.61 Aligned_cols=308 Identities=11% Similarity=0.055 Sum_probs=221.5
Q ss_pred cceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccC--CCCCcceeEeeecccCceeEEEecCCCeEEEEecC
Q 016446 44 DEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRG--KPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQ 121 (389)
Q Consensus 44 ~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g--~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~ 121 (389)
.+.|++++|+|||+.||+ ++.| ..++||++..+ ++. ..+ ..+...+.+++|+ |+|++||+++.
T Consensus 11 ~~~v~~~~~s~~g~~l~~----~~~d------~~i~iw~~~~~~~~~~--~~~--~~h~~~v~~~~~s-~~~~~l~s~s~ 75 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVT----TTAT------NQVELYEQDGNGWKHA--RTF--SDHDKIVTCVDWA-PKSNRIVTCSQ 75 (377)
T ss_dssp SSCCSCCEECSSSSEEEC----CCSS------SCBCEEEEETTEEEEC--CCB--CCCSSCEEEEEEC-TTTCCEEEEET
T ss_pred CCcEEEEEECCCCCEEEE----ecCC------CEEEEEEccCCceEEE--EEE--ecCCceEEEEEEe-CCCCEEEEEeC
Confidence 378999999999999998 5677 78999999877 331 112 1345567889998 89999999999
Q ss_pred CCeEEEEeCCCCe---EEEEec--CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCe---EEEEEee-cCCceeEE
Q 016446 122 DSIYKVFDLKNYT---MLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGT---VLKVFYH-LLHRNKKV 191 (389)
Q Consensus 122 D~tiklWdl~~g~---~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~---~l~tl~~-~~~~~~~v 191 (389)
|++|+|||+.+++ +...+. ...|.+++|+ ++.+|++++ .|++|++||+.+++ +++.+.. |...+..+
T Consensus 76 d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~ 152 (377)
T 3dwl_C 76 DRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGS---GARVISVCYFEQENDWWVSKHLKRPLRSTILSL 152 (377)
T ss_dssp TSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEE---SSSCEEECCC-----CCCCEEECSSCCSCEEEE
T ss_pred CCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEe---cCCeEEEEEECCcccceeeeEeecccCCCeEEE
Confidence 9999999999887 556554 5689999999 588888874 45899999999988 4888987 99999999
Q ss_pred EEEecCCCeEEEEeCCCcEEEEECC------------------CCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEE
Q 016446 192 DFIEQFNEKLLVKQENENLQILDVR------------------NAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVA 252 (389)
Q Consensus 192 ~f~~~~~~~l~~~s~D~tIklWd~~------------------tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIk 252 (389)
+|+ |++..+++++.|++|++||+. +++++..+ +|...|.+++|+|+|++|++++ |++|+
T Consensus 153 ~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~ 230 (377)
T 3dwl_C 153 DWH-PNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVT 230 (377)
T ss_dssp EEC-TTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC
T ss_pred EEc-CCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEE
Confidence 998 678899999999999999995 57788888 9999999999999999999998 99999
Q ss_pred EEeCC-CcE----EEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCC-C-eEEEEecCC
Q 016446 253 VWNFR-GEL----VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILT-G-KCLAKINAT 325 (389)
Q Consensus 253 lWd~~-G~~----l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~t-g-~~l~tl~gH 325 (389)
|||+. +++ +.++.+|..+ |.+++|+|||++|++|+.| +.+ +|+... + ++...+...
T Consensus 231 iwd~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~l~~~~~~-----------~~~-~~~~~~~~~~~~~~~~~~ 293 (377)
T 3dwl_C 231 IAYPSAPEQPPRALITVKLSQLP-----LRSLLWANESAIVAAGYNY-----------SPI-LLQGNESGWAHTRDLDAG 293 (377)
T ss_dssp -CEECSTTSCEEECCCEECSSSC-----EEEEEEEETTEEEEEESSS-----------SEE-EECCCC---CCSBCCCSC
T ss_pred EEECCCCCCcceeeEeecCCCCc-----eEEEEEcCCCCEEEEEcCC-----------cEE-EEEeCCCceEEEeeeccc
Confidence 99997 877 8899999887 8999999999999998643 555 676553 2 223333322
Q ss_pred CCCCCcccccCCCCCC-----Cc------cccccc------cceecccccccCCEEEEEECCCC-C---EEEEecCCCcE
Q 016446 326 NCSPKVDDELGSSSTG-----KS------KKLNKS------SYIRSTVGEALEDITSLFYDEER-N---EIYTGNRHGLV 384 (389)
Q Consensus 326 ~~~~~~~~~~~~~~~~-----~~------~~~~~~------~~~~~~~~~~~~~V~svafSpdg-~---~LaSgs~D~tI 384 (389)
..... ....+.+..+ +. ..+... .........|...|++|++.|+. . .|+||+.||+|
T Consensus 294 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i 372 (377)
T 3dwl_C 294 TSKTS-FTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRV 372 (377)
T ss_dssp CCCCC-BSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEE
T ss_pred ccccc-cccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcE
Confidence 11000 0000000000 00 000000 01111223366899999966554 3 69999999999
Q ss_pred EEccC
Q 016446 385 HVWSN 389 (389)
Q Consensus 385 rlW~~ 389 (389)
||||.
T Consensus 373 ~iWdl 377 (377)
T 3dwl_C 373 VLWTL 377 (377)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 99984
No 73
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-42 Score=364.51 Aligned_cols=303 Identities=10% Similarity=0.019 Sum_probs=231.5
Q ss_pred cccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 3 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
..+|.+|.++ |+++|+++.|+||| +.+++ +++++| ...|++|+|+|||. + +.+++
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~---~~l~gh-~~~v~~V~FsPdg~-----------~------~~~~~ 71 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYA---KDINCN-SKNLFHVKEFPLEF-----------E------NKLDF 71 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCC---SCCSSB-GGGTEEEEEECCCC-----------C------CTTTT
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--ccccc---ceecCC-CccEEEEEECCCCC-----------c------ceEEE
Confidence 3578899999 99999999999999 64444 455665 58999999999991 1 33334
Q ss_pred eEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec-CC-----cEEEEEEc-CCc
Q 016446 81 EYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DK-----HVQEIKIS-PGI 153 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~-~~-----~V~~vafS-~g~ 153 (389)
|+.. |.. +++..+...+.+|+|| |||++||+++.||+|+|||.++ ++.++. .. .|.+|+|| +|+
T Consensus 72 ~~~~-~~~-----~~~~~~~~~V~~vawS-PdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~ 142 (588)
T 2j04_A 72 ELAQ-QNG-----LLNSQPVCYPRVCKPS-PIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIES 142 (588)
T ss_dssp SCCC-SSC-----SSTTSCSCCEEEEEEC-SSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSS
T ss_pred EeCC-Cce-----EeecCCCCcEEEEEEC-CCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCC
Confidence 4422 222 2221234567899998 9999999999999999999644 665554 22 49999999 699
Q ss_pred eEEEEecCCCCeeEEEEEcCCCe-------EEEEE----eecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeE--
Q 016446 154 MLLIFNRSSSHVPLKILSIEDGT-------VLKVF----YHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAEL-- 220 (389)
Q Consensus 154 ~la~~~~~s~d~tiklWd~~tG~-------~l~tl----~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~-- 220 (389)
+||+++ .|++|||||+.+|+ .++++ .+|...|.+|+|+ |++ +++++.|++||+||+.++++
T Consensus 143 ~LAsgs---~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawS-Pdg--Laass~D~tVrlWd~~~~~~~~ 216 (588)
T 2j04_A 143 SIVVGN---EDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWY-EDV--LVAALSNNSVFSMTVSASSHQP 216 (588)
T ss_dssp CEEEEE---TTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEE-TTE--EEEEETTCCEEEECCCSSSSCC
T ss_pred EEEEEc---CCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEc-CCc--EEEEeCCCeEEEEECCCCcccc
Confidence 999874 46899999999986 47888 5677899999999 655 88899999999999998884
Q ss_pred -EEEc-ccCCCceEEEEEcCCCcEEEEEcCCeEEEEeCCCcEEEEec-cCcCCcCCCCeeEEEE--CCCCCEEEEEecCC
Q 016446 221 -MEVS-RTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFE-DHLLWHPDCNTNNIYI--TSDQDLIISYCKAE 295 (389)
Q Consensus 221 -~~~l-~gh~~~v~sv~fspdg~~laS~sD~tIklWd~~G~~l~tl~-gh~~~~~~~~v~sv~f--SpdG~~laS~s~D~ 295 (389)
.+++ .+|...|.+|+|+ |+.||+++|++|||||+.+..+.++. ||... |++|+| ||||+.|+++++
T Consensus 217 ~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIkLWd~~~~~~~~~~~gh~~~-----V~~va~~~s~d~~~La~a~e-- 287 (588)
T 2j04_A 217 VSRMIQNASRRKITDLKIV--DYKVVLTCPGYVHKIDLKNYSISSLKTGSLEN-----FHIIPLNHEKESTILLMSNK-- 287 (588)
T ss_dssp CEEEEECCCSSCCCCEEEE--TTEEEEECSSEEEEEETTTTEEEEEECSCCSC-----CCEEEETTCSSCEEEEECSS--
T ss_pred ceeeecccccCcEEEEEEE--CCEEEEEeCCeEEEEECCCCeEEEEEcCCCce-----EEEEEeeeCCCCCEEEEEcC--
Confidence 4667 5899999999999 68999999999999999855554444 89887 799999 999999999865
Q ss_pred CcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccc------cCCEEEEEEC
Q 016446 296 PEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEA------LEDITSLFYD 369 (389)
Q Consensus 296 ~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~V~svafS 369 (389)
||+ |||... .++ +... +.. ....+++.++|+..++. ...|++|+||
T Consensus 288 ---------dG~-klw~~d---~~~-~spd------------~~l--~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~S 339 (588)
T 2j04_A 288 ---------TSY-KVLLED---ELH-VTAD------------NII--APYLEKKFKKWSTIWNEFNNYETTLVIHGISLS 339 (588)
T ss_dssp ---------CEE-EEEESS---SEE-EECC------------CSS--HHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEEC
T ss_pred ---------CCC-EEEeec---cEE-ECCC------------ceE--EEEcCCEEEEEECCCCceeeeccceEEEEEEEC
Confidence 499 999976 122 2221 111 11124444555443222 2369999999
Q ss_pred CCCCEEEEecC
Q 016446 370 EERNEIYTGNR 380 (389)
Q Consensus 370 pdg~~LaSgs~ 380 (389)
|||++||++++
T Consensus 340 PdG~~lA~~~~ 350 (588)
T 2j04_A 340 PDGYSIAIVYD 350 (588)
T ss_dssp TTSSEEEEEEE
T ss_pred CCCCEEEEEEe
Confidence 99999999984
No 74
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-40 Score=316.64 Aligned_cols=284 Identities=11% Similarity=0.074 Sum_probs=246.5
Q ss_pred cccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 3 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
+..|..|.|+ +++||+++.||+|++|+..+++++.++.+|. ..|.+++|+|+|+.|+++ +.| ..+++
T Consensus 32 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~----~~d------g~i~i 100 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHT-GTIWSIDVDCFTKYCVTG----SAD------YSIKL 100 (369)
T ss_dssp SSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSEEEEE----ETT------TEEEE
T ss_pred eceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcC-CcEEEEEEcCCCCEEEEE----eCC------CeEEE
Confidence 4679999998 8899999999999999999999999999875 899999999999999994 467 78999
Q ss_pred eEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCC-----CeEEEEeCCCCeE-----------EEEe--cCC
Q 016446 81 EYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD-----SIYKVFDLKNYTM-----------LYSI--SDK 142 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D-----~tiklWdl~~g~~-----------l~tl--~~~ 142 (389)
|++.++++ +....+...+..++|+ |+|++|++++.+ ++|++||+.+++. +..+ +..
T Consensus 101 wd~~~~~~-----~~~~~~~~~v~~~~~~-~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (369)
T 3zwl_B 101 WDVSNGQC-----VATWKSPVPVKRVEFS-PCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEG 174 (369)
T ss_dssp EETTTCCE-----EEEEECSSCEEEEEEC-TTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTT
T ss_pred EECCCCcE-----EEEeecCCCeEEEEEc-cCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcC
Confidence 99998886 2222345567789998 899999999999 9999999876542 1122 122
Q ss_pred --cEEEEEEc-CCceEEEEecCCCCeeEEEEEcCC-CeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCC
Q 016446 143 --HVQEIKIS-PGIMLLIFNRSSSHVPLKILSIED-GTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNA 218 (389)
Q Consensus 143 --~V~~vafS-~g~~la~~~~~s~d~tiklWd~~t-G~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg 218 (389)
.|.+++|+ ++..|++++ .|++|++||+.+ ++++.++..|...+..++|+ |++..+++++.|++|++||++++
T Consensus 175 ~~~~~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 175 LDAATVAGWSTKGKYIIAGH---KDGKISKYDVSNNYEYVDSIDLHEKSISDMQFS-PDLTYFITSSRDTNSFLVDVSTL 250 (369)
T ss_dssp CCCEEEEEECGGGCEEEEEE---TTSEEEEEETTTTTEEEEEEECCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTC
T ss_pred ccceeEEEEcCCCCEEEEEc---CCCEEEEEECCCCcEeEEEEecCCCceeEEEEC-CCCCEEEEecCCceEEEEECCCC
Confidence 89999999 578888764 458999999999 89999999999999999998 78889999999999999999999
Q ss_pred eEEEEcccCCCceEEEEEcCCCcEEEEEc-CC--------------eEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEEC
Q 016446 219 ELMEVSRTEFMTPSAFIFLYENQLFLTFR-NR--------------TVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYIT 282 (389)
Q Consensus 219 ~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~--------------tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fS 282 (389)
+++..+. |...+..++|+|+++++++++ ++ .|++||.. ++++.++.+|... |.+++|+
T Consensus 251 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-----v~~~~~s 324 (369)
T 3zwl_B 251 QVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGP-----LNTVAIS 324 (369)
T ss_dssp CEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSC-----EEEEEEC
T ss_pred ceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCc-----EEEEEEC
Confidence 9999887 778999999999999999998 77 89999996 9999999999877 8999999
Q ss_pred CCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecC
Q 016446 283 SDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 324 (389)
Q Consensus 283 pdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~g 324 (389)
|||++||+++.| |+|+|||+.++.....+..
T Consensus 325 ~~~~~l~s~~~d-----------g~v~iw~~~~~~~~~~~~~ 355 (369)
T 3zwl_B 325 PQGTSYASGGED-----------GFIRLHHFEKSYFDFKYDV 355 (369)
T ss_dssp TTSSEEEEEETT-----------SEEEEEEECHHHHTCCCHH
T ss_pred CCCCEEEEEcCC-----------CeEEEEECccccchhHHHH
Confidence 999999999875 9999999988776555443
No 75
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.5e-40 Score=351.77 Aligned_cols=279 Identities=11% Similarity=0.120 Sum_probs=232.6
Q ss_pred cccEEEEEee---ccEEEEEecCceEEEEeccc-----ceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCccee
Q 016446 3 RTKVIEIVAA---RDIVFALAHSGVCAAFSRET-----NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLK 74 (389)
Q Consensus 3 ~~~v~~i~~~---~~~~a~~~~~gtiklW~~~t-----g~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~ 74 (389)
+..|..|.|+ +++||+++.||+||+|++.+ +.+.+.+.+|. ..|.+|+|+|+|+.|++ ++.|
T Consensus 382 ~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~-~~v~~v~~s~~g~~l~s----gs~D----- 451 (694)
T 3dm0_A 382 TDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHS-HFVEDVVLSSDGQFALS----GSWD----- 451 (694)
T ss_dssp SSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCS-SCEEEEEECTTSSEEEE----EETT-----
T ss_pred CceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCC-CcEEEEEECCCCCEEEE----EeCC-----
Confidence 4568999988 47999999999999999865 45677888875 89999999999999999 4577
Q ss_pred eeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEe------cCCcEEEEE
Q 016446 75 CRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI------SDKHVQEIK 148 (389)
Q Consensus 75 ~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl------~~~~V~~va 148 (389)
..++|||+.+|+.. ..+ ..|...+.+++|+ |+|++|+|||.|++|||||+.. .+..++ |...|.+++
T Consensus 452 -g~v~vwd~~~~~~~--~~~--~~h~~~v~~~~~s-~~~~~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~~h~~~v~~~~ 524 (694)
T 3dm0_A 452 -GELRLWDLAAGVST--RRF--VGHTKDVLSVAFS-LDNRQIVSASRDRTIKLWNTLG-ECKYTISEGGEGHRDWVSCVR 524 (694)
T ss_dssp -SEEEEEETTTTEEE--EEE--ECCSSCEEEEEEC-TTSSCEEEEETTSCEEEECTTS-CEEEEECSSTTSCSSCEEEEE
T ss_pred -CcEEEEECCCCcce--eEE--eCCCCCEEEEEEe-CCCCEEEEEeCCCEEEEEECCC-CcceeeccCCCCCCCcEEEEE
Confidence 89999999888751 222 2455667889998 8999999999999999999854 444444 235799999
Q ss_pred EcCC---ceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcc
Q 016446 149 ISPG---IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR 225 (389)
Q Consensus 149 fS~g---~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~ 225 (389)
|+|+ ..|+++ +.|++||+||+.+++++.++.+|.+.+.+++|+ |++..+++++.|++|+|||+++++++..+.
T Consensus 525 ~~~~~~~~~l~s~---s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~s-pdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~ 600 (694)
T 3dm0_A 525 FSPNTLQPTIVSA---SWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVS-PDGSLCASGGKDGVVLLWDLAEGKKLYSLE 600 (694)
T ss_dssp ECSCSSSCEEEEE---ETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSBCEEEETTTTEEEECCB
T ss_pred EeCCCCcceEEEE---eCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEe-CCCCEEEEEeCCCeEEEEECCCCceEEEec
Confidence 9963 467776 456899999999999999999999999999998 788999999999999999999999999887
Q ss_pred cCCCceEEEEEcCCCcEEEEEcCCeEEEEeCC-CcEEEEeccCcCCc--------------CCCCeeEEEECCCCCEEEE
Q 016446 226 TEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWH--------------PDCNTNNIYITSDQDLIIS 290 (389)
Q Consensus 226 gh~~~v~sv~fspdg~~laS~sD~tIklWd~~-G~~l~tl~gh~~~~--------------~~~~v~sv~fSpdG~~laS 290 (389)
.+ ..|.+++|+|++.+|++++|+.|+|||++ ++++.++..|.... ....+.+++|||||++|+|
T Consensus 601 ~~-~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~s 679 (694)
T 3dm0_A 601 AN-SVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFS 679 (694)
T ss_dssp CS-SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEE
T ss_pred CC-CcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEE
Confidence 65 57999999999999998889999999997 88988887543210 0012689999999999999
Q ss_pred EecCCCcccccCCCCCeEEEEeCC
Q 016446 291 YCKAEPEDQWMEGSAGSINVSSIL 314 (389)
Q Consensus 291 ~s~D~~~~~~~~s~D~tIklWd~~ 314 (389)
||.| |+|||||+.
T Consensus 680 gs~D-----------g~i~iW~i~ 692 (694)
T 3dm0_A 680 GYTD-----------GVIRVWGIG 692 (694)
T ss_dssp EETT-----------SEEEEEEC-
T ss_pred EcCC-----------CeEEEEecc
Confidence 9875 999999974
No 76
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.1e-40 Score=313.76 Aligned_cols=274 Identities=11% Similarity=0.083 Sum_probs=226.1
Q ss_pred cceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCC
Q 016446 44 DEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDS 123 (389)
Q Consensus 44 ~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~ 123 (389)
.+.|.+++|+|||+.|+.+. .+ ..+.+|..... ...+....+...+.+++|+ |+|++|++++ |+
T Consensus 9 ~~~v~~~~~s~dg~~~~~~~----~~------~~~~~~~~~~~----~~~~~~~~h~~~v~~~~~~-~~~~~l~~~~-dg 72 (337)
T 1gxr_A 9 SKPAYSFHVTADGQMQPVPF----PP------DALIGPGIPRH----ARQINTLNHGEVVCAVTIS-NPTRHVYTGG-KG 72 (337)
T ss_dssp EEECCEEEECSSSCEEECCC----CT------TSSSSTTCCSE----EEEEEEECCSSCCCEEEEC-SSSSEEEEEC-BS
T ss_pred CCceeEEEECCCCCEEEeec----CC------CcEeccccCCc----cccceeccCCCceEEEEEe-cCCcEEEEcC-CC
Confidence 36899999999999988742 22 11122221111 1112223455667889998 8999999999 99
Q ss_pred eEEEEeCCCCeE---EEEe----cCCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCe--EEEEEeecCCceeEEEE
Q 016446 124 IYKVFDLKNYTM---LYSI----SDKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGT--VLKVFYHLLHRNKKVDF 193 (389)
Q Consensus 124 tiklWdl~~g~~---l~tl----~~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~--~l~tl~~~~~~~~~v~f 193 (389)
+|++||+.+++. +..+ +...|.+++|+ ++.+|++++ .|++|++||+.+++ +...+..|...+..++|
T Consensus 73 ~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~ 149 (337)
T 1gxr_A 73 CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG---EASTLSIWDLAAPTPRIKAELTSSAPACYALAI 149 (337)
T ss_dssp EEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE---SSSEEEEEECCCC--EEEEEEECSSSCEEEEEE
T ss_pred eEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc---CCCcEEEEECCCCCcceeeecccCCCceEEEEE
Confidence 999999987653 3333 34689999999 577888764 45899999999988 77788888899999999
Q ss_pred EecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCc
Q 016446 194 IEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWH 271 (389)
Q Consensus 194 ~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~ 271 (389)
+ |++..+++++.|++|++||+++++++..+.+|...|.+++|+|++++|++++ |++|++||++ ++++..+. |...
T Consensus 150 ~-~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~- 226 (337)
T 1gxr_A 150 S-PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQ- 226 (337)
T ss_dssp C-TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSC-
T ss_pred C-CCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCc-
Confidence 8 6788999999999999999999999999999999999999999999999998 9999999997 88888875 4444
Q ss_pred CCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccc
Q 016446 272 PDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSY 351 (389)
Q Consensus 272 ~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (389)
+.+++|+|||++|++++.| ++|++||+.+++.. .+.+|.
T Consensus 227 ----v~~~~~s~~~~~l~~~~~~-----------~~i~~~~~~~~~~~-~~~~~~------------------------- 265 (337)
T 1gxr_A 227 ----IFSLGYCPTGEWLAVGMES-----------SNVEVLHVNKPDKY-QLHLHE------------------------- 265 (337)
T ss_dssp ----EEEEEECTTSSEEEEEETT-----------SCEEEEETTSSCEE-EECCCS-------------------------
T ss_pred ----eEEEEECCCCCEEEEEcCC-----------CcEEEEECCCCCeE-EEcCCc-------------------------
Confidence 7999999999999998765 89999999988764 677887
Q ss_pred eecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 352 IRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 352 ~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
..|.+++|+|||+.|++++.|++|++|+.
T Consensus 266 ---------~~v~~~~~~~~~~~l~~~~~dg~i~~~~~ 294 (337)
T 1gxr_A 266 ---------SCVLSLKFAYCGKWFVSTGKDNLLNAWRT 294 (337)
T ss_dssp ---------SCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ---------cceeEEEECCCCCEEEEecCCCcEEEEEC
Confidence 58999999999999999999999999983
No 77
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.4e-40 Score=325.59 Aligned_cols=303 Identities=10% Similarity=0.057 Sum_probs=215.2
Q ss_pred EEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeE
Q 016446 27 AFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFV 106 (389)
Q Consensus 27 lW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v 106 (389)
||++.+.+++.+++.|. +.|++|+|||||+.||+ ++++ .++||++..++. .+.. ....+..+
T Consensus 3 i~s~~~~~~~~~~~~h~-~~V~~v~fs~dg~~la~----g~~~-------~~~iw~~~~~~~-----~~~~-~~~~~~~~ 64 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVS-NPVTDYEFNQDQSCLIL----STLK-------SFEIYNVHPVAH-----IMSQ-EMRHLSKV 64 (355)
T ss_dssp ----------------C-CCCCEEEECTTSSEEEE----ECSS-------EEEEEEETTEEE-----EEEE-ECSCCCEE
T ss_pred cccccccCCccccccCC-CceEEEEECCCCCEEEE----EcCC-------EEEEEecCCcce-----eeee-ecCCeEEE
Confidence 57777888998888874 89999999999999988 4555 357899876654 2221 22246678
Q ss_pred EEecCCCeEE-EEecCCCeEEEEeCCCCeEEEEec-CCcEEEEEEcCCceEEEEecCCCCeeEEEEEcCCC-eEEEEEee
Q 016446 107 EFDDVNGKVL-TYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDG-TVLKVFYH 183 (389)
Q Consensus 107 ~Fs~pdG~~L-as~s~D~tiklWdl~~g~~l~tl~-~~~V~~vafS~g~~la~~~~~s~d~tiklWd~~tG-~~l~tl~~ 183 (389)
+|+ ++++++ ++++.|++|+|||+.+++++.++. ...|.+++|++...+++. |++|++||+.++ ++++++..
T Consensus 65 ~~~-~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-----~~~i~i~d~~~~~~~~~~~~~ 138 (355)
T 3vu4_A 65 RML-HRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSY-----GDVISVFKFGNPWKRITDDIR 138 (355)
T ss_dssp EEC-TTSSEEEEECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEE-----TTEEEEEESSTTCCBSSCCEE
T ss_pred EEc-CCCCEEEEEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEE-----cCEEEEEECCCCceeeEEecc
Confidence 997 677776 567889999999999999998886 568999999976655432 368999999999 88887774
Q ss_pred cCCceeEEEEEecCCCeEEEE--eCCCcEEEEECCCCe----------------EEEEcccCCCceEEEEEcCCCcEEEE
Q 016446 184 LLHRNKKVDFIEQFNEKLLVK--QENENLQILDVRNAE----------------LMEVSRTEFMTPSAFIFLYENQLFLT 245 (389)
Q Consensus 184 ~~~~~~~v~f~~~~~~~l~~~--s~D~tIklWd~~tg~----------------~~~~l~gh~~~v~sv~fspdg~~laS 245 (389)
....++++ + ..++++ +.|++|+|||+.+++ +++++.+|...|.+++|+|||++|||
T Consensus 139 ---~~~~~~~s-~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s 212 (355)
T 3vu4_A 139 ---FGGVCEFS-N--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVAT 212 (355)
T ss_dssp ---EEEEEEEE-T--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEE
T ss_pred ---CCceEEEE-c--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEE
Confidence 44455555 3 677764 699999999999876 37889999999999999999999999
Q ss_pred Ec-CCe-EEEEeCC-CcEEEEec-c-CcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeE--
Q 016446 246 FR-NRT-VAVWNFR-GELVTSFE-D-HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC-- 318 (389)
Q Consensus 246 ~s-D~t-IklWd~~-G~~l~tl~-g-h~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~-- 318 (389)
++ |++ |||||++ |+++.+|+ | |... |.+++|||||++||+++.| ++|+|||+.++..
T Consensus 213 ~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~-----v~~~~~s~~~~~l~s~s~d-----------~~v~iw~~~~~~~~~ 276 (355)
T 3vu4_A 213 CSQDGTIIRVFKTEDGVLVREFRRGLDRAD-----VVDMKWSTDGSKLAVVSDK-----------WTLHVFEIFNDQDNK 276 (355)
T ss_dssp EETTCSEEEEEETTTCCEEEEEECTTCCSC-----EEEEEECTTSCEEEEEETT-----------CEEEEEESSCCSCCC
T ss_pred EeCCCCEEEEEECCCCcEEEEEEcCCCCCc-----EEEEEECCCCCEEEEEECC-----------CEEEEEEccCCCCcc
Confidence 99 999 9999997 99999998 6 8776 8999999999999999875 9999999986532
Q ss_pred EEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEcc
Q 016446 319 LAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 319 l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
...+.++-. + ..+. ..|.... .....+....+..++|+|||+.|++++.||++++|+
T Consensus 277 ~~~~~~~~~-~---~~~~--------~~~~~~~-~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~ 333 (355)
T 3vu4_A 277 RHALKGWIN-M---KYFQ--------SEWSLCN-FKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFK 333 (355)
T ss_dssp SEETTTTEE-C---CCCC--------CSSCSEE-EECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEE
T ss_pred cccccceee-c---cccc--------cccceeE-EEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 222222100 0 0000 0000000 000011112346699999999999999999999996
No 78
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.1e-41 Score=322.26 Aligned_cols=276 Identities=13% Similarity=0.132 Sum_probs=233.2
Q ss_pred cccEEEEEee------ccEEEEEecCceEEEEecccceeeeeeecC----CcceEEEEEEeeC----CCEEEEEEEeecC
Q 016446 3 RTKVIEIVAA------RDIVFALAHSGVCAAFSRETNRRICFLNVS----PDEVIRSLFYNKN----NDSLITVSVYASD 68 (389)
Q Consensus 3 ~~~v~~i~~~------~~~~a~~~~~gtiklW~~~tg~~l~tl~~~----~~~~v~sv~~spd----g~~l~s~s~~~~~ 68 (389)
...|..|.|+ ...+++++.++.|++|+..+++.++.+..+ +.+.|.+++|+|+ |+.|++ ++.
T Consensus 18 ~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~----~~~ 93 (366)
T 3k26_A 18 NQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV----AGS 93 (366)
T ss_dssp CSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE----EET
T ss_pred CCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE----ecC
Confidence 4689999998 456777777889999999999988888754 3367999999999 668888 457
Q ss_pred CCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecC-CCeEEEEecCCCeEEEEeCCCCeEEEEe-----cCC
Q 016446 69 NFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDV-NGKVLTYSAQDSIYKVFDLKNYTMLYSI-----SDK 142 (389)
Q Consensus 69 d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~p-dG~~Las~s~D~tiklWdl~~g~~l~tl-----~~~ 142 (389)
| ..+++|++.++++. . .+ ..+...+.+++|+ | ++++|++++.|++|++||+.+++++..+ +..
T Consensus 94 d------g~i~v~d~~~~~~~--~-~~-~~~~~~i~~~~~~-~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 162 (366)
T 3k26_A 94 R------GIIRIINPITMQCI--K-HY-VGHGNAINELKFH-PRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRD 162 (366)
T ss_dssp T------CEEEEECTTTCCEE--E-EE-ESCCSCEEEEEEC-SSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSS
T ss_pred C------CEEEEEEchhceEe--e-ee-cCCCCcEEEEEEC-CCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccC
Confidence 7 89999999988761 1 12 2355667889998 7 9999999999999999999999999887 356
Q ss_pred cEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEee----------------------------cCCceeEEEE
Q 016446 143 HVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH----------------------------LLHRNKKVDF 193 (389)
Q Consensus 143 ~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~----------------------------~~~~~~~v~f 193 (389)
.|.+++|+ ++.+|++++ .|++|++||+.+++++..+.. |...+..++|
T Consensus 163 ~v~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 239 (366)
T 3k26_A 163 EVLSADYDLLGEKIMSCG---MDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRW 239 (366)
T ss_dssp CEEEEEECTTSSEEEEEE---TTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEE
T ss_pred ceeEEEECCCCCEEEEec---CCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEE
Confidence 89999999 588888774 458999999999887665544 8899999999
Q ss_pred EecCCCeEEEEeCCCcEEEEECCCCeE--------------EEEcccCCCceEEEEEcCC--CcEEEEEc-CCeEEEEeC
Q 016446 194 IEQFNEKLLVKQENENLQILDVRNAEL--------------MEVSRTEFMTPSAFIFLYE--NQLFLTFR-NRTVAVWNF 256 (389)
Q Consensus 194 ~~~~~~~l~~~s~D~tIklWd~~tg~~--------------~~~l~gh~~~v~sv~fspd--g~~laS~s-D~tIklWd~ 256 (389)
+ ++.+++++.|++|++||+.++++ +..+.+|...|++++|+|+ |++|++++ |++|++||+
T Consensus 240 ~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~ 316 (366)
T 3k26_A 240 L---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDL 316 (366)
T ss_dssp E---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEEC
T ss_pred c---CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEEC
Confidence 7 67999999999999999998754 8889999999999999999 99999999 999999999
Q ss_pred C-Cc----EEEEeccCc--CCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCC
Q 016446 257 R-GE----LVTSFEDHL--LWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILT 315 (389)
Q Consensus 257 ~-G~----~l~tl~gh~--~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~t 315 (389)
+ ++ .+.++.+|. .. |.+++|+|||++||+++.| |+|+|||+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~l~s~~~d-----------g~i~iwd~~~ 366 (366)
T 3k26_A 317 EVEDPHKAKCTTLTHHKCGAA-----IRQTSFSRDSSILIAVCDD-----------ASIWRWDRLR 366 (366)
T ss_dssp CSSSGGGCEEEEECCTTCCSC-----EEEEEECTTSSEEEEEETT-----------SEEEEEEC--
T ss_pred CCCCCccccceEEcccccCCc-----eEEEEeCCCCCeEEEEeCC-----------CEEEEEEecC
Confidence 7 65 556899883 44 8999999999999999875 9999999863
No 79
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.2e-40 Score=316.80 Aligned_cols=247 Identities=11% Similarity=0.083 Sum_probs=198.6
Q ss_pred eeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecC-CCe
Q 016446 36 ICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDV-NGK 114 (389)
Q Consensus 36 l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~p-dG~ 114 (389)
+..+.+| .+.|++++|+|||+.||+ ++.| .+++||++..+.......+ ..|...+.+|+|++| +|+
T Consensus 2 ~~~~~~h-~~~V~~~~~s~~g~~las----~s~D------~~v~iw~~~~~~~~~~~~l--~gH~~~V~~v~~s~~~~g~ 68 (297)
T 2pm7_B 2 VVIANAH-NEMIHDAVMDYYGKRMAT----CSSD------KTIKIFEVEGETHKLIDTL--TGHEGPVWRVDWAHPKFGT 68 (297)
T ss_dssp CEECCSC-SSCEEEEEECTTSSEEEE----EETT------SCEEEEEBCSSCBCCCEEE--CCCSSCEEEEEECCGGGCS
T ss_pred ceeccCC-cCceEEEEECCCCCEEEE----EeCC------CEEEEEecCCCCcEEEEEE--ccccCCeEEEEecCCCcCC
Confidence 3456776 489999999999999999 4577 8899999864422111222 245566788999843 499
Q ss_pred EEEEecCCCeEEEEeCCCCe--EEEEe--cCCcEEEEEEcC---CceEEEEecCCCCeeEEEEEcCCCe--EEEEEeecC
Q 016446 115 VLTYSAQDSIYKVFDLKNYT--MLYSI--SDKHVQEIKISP---GIMLLIFNRSSSHVPLKILSIEDGT--VLKVFYHLL 185 (389)
Q Consensus 115 ~Las~s~D~tiklWdl~~g~--~l~tl--~~~~V~~vafS~---g~~la~~~~~s~d~tiklWd~~tG~--~l~tl~~~~ 185 (389)
+|||||.|++|||||+++++ ++.++ |...|.+|+|+| |.+||+++ .|++|++||+.+++ ....+.+|.
T Consensus 69 ~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s---~d~~v~~wd~~~~~~~~~~~~~~h~ 145 (297)
T 2pm7_B 69 ILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVAS---SDGKVSVVEFKENGTTSPIIIDAHA 145 (297)
T ss_dssp EEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE---TTSEEEEEEBCSSSCBCCEEEECCS
T ss_pred EEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEE---CCCcEEEEEecCCCceeeeeeeccc
Confidence 99999999999999998875 45555 457899999996 67888874 45899999998874 246778899
Q ss_pred CceeEEEEEec------------CCCeEEEEeCCCcEEEEECCCCe----EEEEcccCCCceEEEEEcCCC---cEEEEE
Q 016446 186 HRNKKVDFIEQ------------FNEKLLVKQENENLQILDVRNAE----LMEVSRTEFMTPSAFIFLYEN---QLFLTF 246 (389)
Q Consensus 186 ~~~~~v~f~~~------------~~~~l~~~s~D~tIklWd~~tg~----~~~~l~gh~~~v~sv~fspdg---~~laS~ 246 (389)
..+.+++|++. ++.+|++++.|++|||||+++++ ++.++.+|...|++|+|+|++ ++|||+
T Consensus 146 ~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~ 225 (297)
T 2pm7_B 146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASV 225 (297)
T ss_dssp SCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred CccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEE
Confidence 99999999842 14588889999999999998876 778899999999999999995 899999
Q ss_pred c-CCeEEEEeCC-Cc---EEEEe--ccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCC
Q 016446 247 R-NRTVAVWNFR-GE---LVTSF--EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL 314 (389)
Q Consensus 247 s-D~tIklWd~~-G~---~l~tl--~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~ 314 (389)
+ |++|+|||++ ++ ....+ .+|..+ |++++|||||++||+++.| ++||||+..
T Consensus 226 s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~g~~las~~~D-----------~~v~lw~~~ 284 (297)
T 2pm7_B 226 SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV-----LWRASWSLSGNVLALSGGD-----------NKVTLWKEN 284 (297)
T ss_dssp ETTSCEEEEEESSTTSCCEEEESSSSCCSSC-----EEEEEECSSSCCEEEEETT-----------SCEEEEEEC
T ss_pred ECCCcEEEEEeCCCCCccceeeeecccCCCc-----EEEEEECCCCCEEEEEcCC-----------CcEEEEEEC
Confidence 9 9999999986 32 23344 456554 8999999999999999875 999999976
No 80
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.3e-40 Score=318.95 Aligned_cols=282 Identities=9% Similarity=0.093 Sum_probs=237.6
Q ss_pred cccEEEEEee--ccEEEEEecCceEEEEecccce--eeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeee
Q 016446 3 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNR--RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRST 78 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~--~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~ 78 (389)
...|.++.|+ +++||+++.|++|++|+.++++ ++.++.+|. ..|.+++|+|+|+.|+++ +.| ..+
T Consensus 8 ~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~----~~d------g~i 76 (372)
T 1k8k_C 8 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHN-GQVTGVDWAPDSNRIVTC----GTD------RNA 76 (372)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCS-SCEEEEEEETTTTEEEEE----ETT------SCE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCC-CcccEEEEeCCCCEEEEE----cCC------CeE
Confidence 4678999998 8899999999999999999887 999999875 899999999999999994 467 789
Q ss_pred eEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeE---EEEec---CCcEEEEEEc-C
Q 016446 79 KIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM---LYSIS---DKHVQEIKIS-P 151 (389)
Q Consensus 79 ~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~---l~tl~---~~~V~~vafS-~ 151 (389)
++|++..+++.....+ ..+...+.+++|+ |+|++|++++.|++|++||+.+++. ...+. ...|.+++|+ +
T Consensus 77 ~vwd~~~~~~~~~~~~--~~~~~~v~~~~~~-~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 153 (372)
T 1k8k_C 77 YVWTLKGRTWKPTLVI--LRINRAARCVRWA-PNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPN 153 (372)
T ss_dssp EEEEEETTEEEEEEEC--CCCSSCEEEEEEC-TTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTT
T ss_pred EEEECCCCeeeeeEEe--ecCCCceeEEEEC-CCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCC
Confidence 9999988764111111 2344557789998 8999999999999999999988762 33332 4689999999 5
Q ss_pred CceEEEEecCCCCeeEEEEEc------------------CCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEE
Q 016446 152 GIMLLIFNRSSSHVPLKILSI------------------EDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQIL 213 (389)
Q Consensus 152 g~~la~~~~~s~d~tiklWd~------------------~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklW 213 (389)
+.+|++++ .|++|++||+ .+++++.++..|...+..++|+ |++..+++++.|++|++|
T Consensus 154 ~~~l~~~~---~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~i~ 229 (372)
T 1k8k_C 154 SVLLAAGS---CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS-ANGSRVAWVSHDSTVCLA 229 (372)
T ss_dssp SSEEEEEE---TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC-SSSSEEEEEETTTEEEEE
T ss_pred CCEEEEEc---CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEEC-CCCCEEEEEeCCCEEEEE
Confidence 77888764 4589999994 5899999999999999999998 778899999999999999
Q ss_pred ECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEcCCeEEEEeCC---Cc--EE---------------------------
Q 016446 214 DVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR---GE--LV--------------------------- 261 (389)
Q Consensus 214 d~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~sD~tIklWd~~---G~--~l--------------------------- 261 (389)
|+++++++..+.+|...|.+++|+|+|++|+++.|++|++|+++ |+ ++
T Consensus 230 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (372)
T 1k8k_C 230 DADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKA 309 (372)
T ss_dssp EGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC
T ss_pred ECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhccccc
Confidence 99999999999999999999999999999999899999999984 32 11
Q ss_pred ---------EEe-ccCcCCcCCCCeeEEE-ECCCC---CEEEEEecCCCcccccCCCCCeEEEEeCCCCeE
Q 016446 262 ---------TSF-EDHLLWHPDCNTNNIY-ITSDQ---DLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 318 (389)
Q Consensus 262 ---------~tl-~gh~~~~~~~~v~sv~-fSpdG---~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~ 318 (389)
..+ .+|... |.+++ ++||| ++||||+.| |+|+|||+.+++.
T Consensus 310 ~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~g~~~~~l~s~~~D-----------g~i~~W~~~~~~~ 364 (372)
T 1k8k_C 310 SSEGSAAAGAGLDSLHKNS-----VSQISVLSGGKAKCSQFCTTGMD-----------GGMSIWDVRSLES 364 (372)
T ss_dssp ---------CCCSSSSSSC-----EEEEEEEESTTTSCSEEEEEETT-----------SEEEEEEHHHHHH
T ss_pred ccccCccccccccccccCC-----cceeEEecCCCcceeeEEEecCC-----------CceEEEEecChhH
Confidence 223 488876 89998 45888 999999875 9999999987654
No 81
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=6.1e-40 Score=326.14 Aligned_cols=275 Identities=11% Similarity=0.152 Sum_probs=222.8
Q ss_pred ccEEEEEecCceEEEEecccceeeeeeecC-CcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCc
Q 016446 13 RDIVFALAHSGVCAAFSRETNRRICFLNVS-PDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSG 91 (389)
Q Consensus 13 ~~~~a~~~~~gtiklW~~~tg~~l~tl~~~-~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~ 91 (389)
+.+||++. |++|+|||..+|++++.+..+ |.+.|.+|+|+|||+.||+ |+.| ..++||++.++++
T Consensus 116 ~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~las----gs~D------g~v~iWd~~~~~~--- 181 (420)
T 4gga_A 116 GNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV----GTSS------AEVQLWDVQQQKR--- 181 (420)
T ss_dssp TSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE----EETT------SCEEEEETTTTEE---
T ss_pred CCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEE----EECC------CeEEEEEcCCCcE---
Confidence 66777775 999999999999998877643 3478999999999999999 5577 8899999998876
Q ss_pred ceeEe-eecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCe-EEEEec--CCcEEEEEEc-CCceEEEEecCCCCee
Q 016446 92 FALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVP 166 (389)
Q Consensus 92 ~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~-~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d~t 166 (389)
+.. ..+...+.+++ +|+++|++|+.|+++++||..... .+.++. ...|..+.++ +|.++++++ .|+.
T Consensus 182 --~~~~~~h~~~v~~~s---~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~---~D~~ 253 (420)
T 4gga_A 182 --LRNMTSHSARVGSLS---WNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG---NDNL 253 (420)
T ss_dssp --EEEECCCSSCEEEEE---EETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE---TTSC
T ss_pred --EEEEeCCCCceEEEe---eCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeee---cccc
Confidence 322 23334344444 467899999999999999987655 556664 5789999999 688888764 4589
Q ss_pred EEEEEcCCCe----EEEEEeecCCceeEEEEEecCCCeEEEE--eCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCC
Q 016446 167 LKILSIEDGT----VLKVFYHLLHRNKKVDFIEQFNEKLLVK--QENENLQILDVRNAELMEVSRTEFMTPSAFIFLYEN 240 (389)
Q Consensus 167 iklWd~~tG~----~l~tl~~~~~~~~~v~f~~~~~~~l~~~--s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg 240 (389)
|++|++.+|+ .+..+..|...+..++|++..+..++++ +.|++|||||+.+|+++..+..|. .+.+++|+|++
T Consensus 254 v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~-~v~~~~~~~~~ 332 (420)
T 4gga_A 254 VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-QVCSILWSPHY 332 (420)
T ss_dssp EEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS-CEEEEEEETTT
T ss_pred ceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc-ceeeeeecCCC
Confidence 9999999886 4577888999999999985444555553 489999999999999999988775 68899999999
Q ss_pred cEEEEE--c-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCC
Q 016446 241 QLFLTF--R-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTG 316 (389)
Q Consensus 241 ~~laS~--s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg 316 (389)
+.++++ . |++|+|||+. ++++.+|+||... |.+|+|||||++|||||.| ++|||||+.+.
T Consensus 333 ~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~-----V~~l~~spdg~~l~S~s~D-----------~tvriWdv~~~ 396 (420)
T 4gga_A 333 KELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR-----VLSLTMSPDGATVASAAAD-----------ETLRLWRCFEL 396 (420)
T ss_dssp TEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC-----EEEEEECTTSSCEEEEETT-----------TEEEEECCSCS
T ss_pred CeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCC-----EEEEEEcCCCCEEEEEecC-----------CeEEEEECCCC
Confidence 988875 3 8999999996 9999999999987 8999999999999999875 99999999888
Q ss_pred eEEEEecCCC
Q 016446 317 KCLAKINATN 326 (389)
Q Consensus 317 ~~l~tl~gH~ 326 (389)
.+.+....|.
T Consensus 397 ~~~~~~~~~~ 406 (420)
T 4gga_A 397 DPARRREREK 406 (420)
T ss_dssp SCC-------
T ss_pred Cccchhhhcc
Confidence 7777776665
No 82
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.8e-40 Score=313.10 Aligned_cols=298 Identities=12% Similarity=0.044 Sum_probs=237.1
Q ss_pred eEEEEecccceeeeeeecCCcceEEEEEEeeC---CCEEEEEEEeecCCCcceeeeeeeEeEecc-CCCCCcceeEeeec
Q 016446 24 VCAAFSRETNRRICFLNVSPDEVIRSLFYNKN---NDSLITVSVYASDNFSSLKCRSTKIEYIRR-GKPDSGFALFESES 99 (389)
Q Consensus 24 tiklW~~~tg~~l~tl~~~~~~~v~sv~~spd---g~~l~s~s~~~~~d~~~l~~~~~~l~~i~~-g~~~~~~~l~~~~~ 99 (389)
.+..|+....+.+..+.+|. +.|.+|+|+|+ |+.|++ ++.| ..++||++.+ ++. ....+ ..+
T Consensus 20 ~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~g~~l~~----~~~d------g~i~iw~~~~~~~~--~~~~~-~~h 85 (368)
T 3mmy_A 20 SATTDNHNPMKDIEVTSSPD-DSIGCLSFSPPTLPGNFLIA----GSWA------NDVRCWEVQDSGQT--IPKAQ-QMH 85 (368)
T ss_dssp ---CCSSCTTCCEECSSCCS-SCEEEEEECCTTSSSEEEEE----EETT------SEEEEEEECTTSCE--EEEEE-EEC
T ss_pred EeccCCCCCcceeEeccCCC-CceEEEEEcCCCCCceEEEE----ECCC------CcEEEEEcCCCCce--eEEEe-ccc
Confidence 34456666678888888874 99999999999 699999 4577 7899999987 443 11112 245
Q ss_pred ccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEe-cCCcEEEEEE--c-CCceEEEEecCCCCeeEEEEEcCCC
Q 016446 100 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-SDKHVQEIKI--S-PGIMLLIFNRSSSHVPLKILSIEDG 175 (389)
Q Consensus 100 ~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl-~~~~V~~vaf--S-~g~~la~~~~~s~d~tiklWd~~tG 175 (389)
...+.+++|+ |+|++|++++.|++|++||+.+++++... +...|.+++| + ++.+|++++ .|++|++||++++
T Consensus 86 ~~~v~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~---~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 86 TGPVLDVCWS-DDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGS---WDKTLKFWDTRSS 161 (368)
T ss_dssp SSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEE---TTSEEEEECSSCS
T ss_pred cCCEEEEEEC-cCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEcc---CCCcEEEEECCCC
Confidence 6667889998 89999999999999999999999987655 4678999999 7 577787764 4589999999999
Q ss_pred eEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEE--EcccCCCceEEEEEcCCCcE----EEEEc-C
Q 016446 176 TVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELME--VSRTEFMTPSAFIFLYENQL----FLTFR-N 248 (389)
Q Consensus 176 ~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~--~l~gh~~~v~sv~fspdg~~----laS~s-D 248 (389)
+++.++..| ..+..+.+. +..+++++.|+++++||+....... ....+...+..+++.++++. +++++ |
T Consensus 162 ~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 237 (368)
T 3mmy_A 162 NPMMVLQLP-ERCYCADVI---YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIE 237 (368)
T ss_dssp SCSEEEECS-SCEEEEEEE---TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETT
T ss_pred cEEEEEecC-CCceEEEec---CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCC
Confidence 999999966 455666654 5688889999999999998765422 22344556677777666654 88888 9
Q ss_pred CeEEEEeCC-C---cEEEEeccCcCCcC-------CCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCe
Q 016446 249 RTVAVWNFR-G---ELVTSFEDHLLWHP-------DCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK 317 (389)
Q Consensus 249 ~tIklWd~~-G---~~l~tl~gh~~~~~-------~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~ 317 (389)
++|++||++ + +++.++.+|..... ...|.+++|+|||++||+++.| |+|+|||+.+++
T Consensus 238 g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-----------g~i~iwd~~~~~ 306 (368)
T 3mmy_A 238 GRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSD-----------GRFSFWDKDART 306 (368)
T ss_dssp SEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETT-----------SCEEEEETTTTE
T ss_pred CcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccC-----------CeEEEEECCCCc
Confidence 999999997 5 67888998875100 0017999999999999999865 999999999999
Q ss_pred EEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEcc
Q 016446 318 CLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 318 ~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
++.++.+|. ..|++++|||||++||+|+.|+..+.|+
T Consensus 307 ~~~~~~~~~----------------------------------~~v~~~~~s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 307 KLKTSEQLD----------------------------------QPISACCFNHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp EEEECCCCS----------------------------------SCEEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred EEEEecCCC----------------------------------CCceEEEECCCCCeEEEEeccccccccc
Confidence 999999998 5999999999999999999998766654
No 83
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.6e-40 Score=321.72 Aligned_cols=275 Identities=13% Similarity=0.133 Sum_probs=226.5
Q ss_pred ccEEEEEee--c-cEEEEEecCceEEEEecccceeeeeeec-CCcceEEEEEEee-CCCEEEEEEEeecCCCcceeeeee
Q 016446 4 TKVIEIVAA--R-DIVFALAHSGVCAAFSRETNRRICFLNV-SPDEVIRSLFYNK-NNDSLITVSVYASDNFSSLKCRST 78 (389)
Q Consensus 4 ~~v~~i~~~--~-~~~a~~~~~gtiklW~~~tg~~l~tl~~-~~~~~v~sv~~sp-dg~~l~s~s~~~~~d~~~l~~~~~ 78 (389)
..|..|.|+ + ++||+++.||+|++|++.+++....+.. .|...|.+++|+| +++.|+++ +.| ..+
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~----~~d------~~i 143 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVS----SIR------GAT 143 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEE----ETT------TEE
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEE----eCC------CEE
Confidence 578999999 5 7999999999999999998988888763 3458999999999 78999884 567 789
Q ss_pred eEeEeccCCCCCcceeEe-eecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEcC-Cc-
Q 016446 79 KIEYIRRGKPDSGFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP-GI- 153 (389)
Q Consensus 79 ~l~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS~-g~- 153 (389)
++|++..+.. ..+.. ..+...+.+++|+ |+|++|++++.|++|++||+ +++++.++. ...|.+++|+| +.
T Consensus 144 ~iwd~~~~~~---~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 144 TLRDFSGSVI---QVFAKTDSWDYWYCCVDVS-VSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDW 218 (383)
T ss_dssp EEEETTSCEE---EEEECCCCSSCCEEEEEEE-TTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTT
T ss_pred EEEECCCCce---EEEeccCCCCCCeEEEEEC-CCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCC
Confidence 9999874322 11211 1223456789998 89999999999999999999 688887775 57899999995 66
Q ss_pred eEEEEecCCCCeeEEEEEcCC----CeEEEEEeecCCceeEEEEEec-CCCeEEEEeCCCcEEEEECCCCeEEEEcccCC
Q 016446 154 MLLIFNRSSSHVPLKILSIED----GTVLKVFYHLLHRNKKVDFIEQ-FNEKLLVKQENENLQILDVRNAELMEVSRTEF 228 (389)
Q Consensus 154 ~la~~~~~s~d~tiklWd~~t----G~~l~tl~~~~~~~~~v~f~~~-~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~ 228 (389)
+|+++ +.|++|++||+.+ ++++.++ +|...+..++|+ | ++..+++++.|++|+|||++++++++.+.+|.
T Consensus 219 ~l~s~---~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s-~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 293 (383)
T 3ei3_B 219 LMATS---SVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFN-PTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHP 293 (383)
T ss_dssp EEEEE---ETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEEC-TTTSCEEEEEESSSEEEEEETTBTTSCSEEEECC
T ss_pred EEEEE---eCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEc-CCCCCEEEEEcCCCcEEEEECCCCcccccccccc
Confidence 67776 4468999999998 8899888 588999999998 6 88999999999999999999999888877664
Q ss_pred -----------------CceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEE
Q 016446 229 -----------------MTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLII 289 (389)
Q Consensus 229 -----------------~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~la 289 (389)
..+..++|+|||++ +++ |++|+|||+. |+++.+|.+|... ..+..++|+|||++||
T Consensus 294 ~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~---~~~~~~~~s~~g~~l~ 368 (383)
T 3ei3_B 294 HRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAA---GIISLNKFSPTGDVLA 368 (383)
T ss_dssp BCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBC---SCCCEEEECTTSSEEE
T ss_pred ccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCC---ceEEEEEEecCccEEE
Confidence 34455788888888 777 9999999996 9999999986421 1267789999999999
Q ss_pred EEecCCCcccccCCCCCeEEEEeCCC
Q 016446 290 SYCKAEPEDQWMEGSAGSINVSSILT 315 (389)
Q Consensus 290 S~s~D~~~~~~~~s~D~tIklWd~~t 315 (389)
+|+ | ++|+|||+.+
T Consensus 369 s~s-d-----------~~i~iw~~~~ 382 (383)
T 3ei3_B 369 SGM-G-----------FNILIWNRED 382 (383)
T ss_dssp EEE-T-----------TEEEEEECC-
T ss_pred Eec-C-----------CcEEEEecCC
Confidence 986 4 8999999864
No 84
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.9e-40 Score=322.93 Aligned_cols=273 Identities=12% Similarity=0.132 Sum_probs=231.0
Q ss_pred EEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEE
Q 016446 47 IRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYK 126 (389)
Q Consensus 47 v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tik 126 (389)
+.++.|++ +.|+++ +.| ..+++|++.+|+. ...+...+...+.+++|+ |||++||+|+.|++|+
T Consensus 96 ~~~~~~s~--~~l~~~----~~d------~~v~lw~~~~~~~---~~~~~~~~~~~v~~v~~s-~~~~~l~~~~~dg~i~ 159 (401)
T 4aez_A 96 LNLLDWSN--LNVVAV----ALE------RNVYVWNADSGSV---SALAETDESTYVASVKWS-HDGSFLSVGLGNGLVD 159 (401)
T ss_dssp CBCEEECT--TSEEEE----EET------TEEEEEETTTCCE---EEEEECCTTCCEEEEEEC-TTSSEEEEEETTSCEE
T ss_pred EEEEeecC--CCEEEE----ECC------CeEEEeeCCCCcE---eEeeecCCCCCEEEEEEC-CCCCEEEEECCCCeEE
Confidence 33455554 556774 355 7899999999886 233433356667889998 8999999999999999
Q ss_pred EEeCCCCeEEEEec--CCcEEEEEEcCCceEEEEecCCCCeeEEEEEcC-CCeEEEEEeecCCceeEEEEEecCCCeEEE
Q 016446 127 VFDLKNYTMLYSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIE-DGTVLKVFYHLLHRNKKVDFIEQFNEKLLV 203 (389)
Q Consensus 127 lWdl~~g~~l~tl~--~~~V~~vafS~g~~la~~~~~s~d~tiklWd~~-tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~ 203 (389)
+||+.+++++.++. ...|.+++|+ +.+|++++ .|++|++||+. .++++.++.+|.+.+..++|+ |++..+++
T Consensus 160 iwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~s 234 (401)
T 4aez_A 160 IYDVESQTKLRTMAGHQARVGCLSWN-RHVLSSGS---RSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWR-SDGLQLAS 234 (401)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEEE-TTEEEEEE---TTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC-TTSSEEEE
T ss_pred EEECcCCeEEEEecCCCCceEEEEEC-CCEEEEEc---CCCCEEEEecccCcceeeEEcCCCCCeeEEEEc-CCCCEEEE
Confidence 99999999998886 4689999995 56777764 45899999999 678899999999999999998 68889999
Q ss_pred EeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCC-cEEEEEc---CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeE
Q 016446 204 KQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYEN-QLFLTFR---NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNN 278 (389)
Q Consensus 204 ~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg-~~laS~s---D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~s 278 (389)
++.|++|++||+++++++..+.+|...|.+++|+|++ .++++++ |++|++||+. ++++.++..+ .. |.+
T Consensus 235 ~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~-~~-----v~~ 308 (401)
T 4aez_A 235 GGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG-SQ-----VTS 308 (401)
T ss_dssp EETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS-SC-----EEE
T ss_pred EeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC-Cc-----EEE
Confidence 9999999999999999999999999999999999976 5677753 9999999996 9999999744 33 899
Q ss_pred EEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEE--ecCCCCCCCcccccCCCCCCCccccccccceeccc
Q 016446 279 IYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAK--INATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTV 356 (389)
Q Consensus 279 v~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~t--l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (389)
++|+|||++|++++. +.|++|+|||+.++++... +.+|.
T Consensus 309 ~~~s~~~~~l~~~~g---------~~dg~i~v~~~~~~~~~~~~~~~~h~------------------------------ 349 (401)
T 4aez_A 309 LIWSPHSKEIMSTHG---------FPDNNLSIWSYSSSGLTKQVDIPAHD------------------------------ 349 (401)
T ss_dssp EEECSSSSEEEEEEC---------TTTCEEEEEEEETTEEEEEEEEECCS------------------------------
T ss_pred EEECCCCCeEEEEee---------cCCCcEEEEecCCccceeEEEecCCC------------------------------
Confidence 999999999999642 2469999999999776654 67887
Q ss_pred ccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 357 GEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 357 ~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
..|.+++|+|||++|++|+.||+|++|+.
T Consensus 350 ----~~v~~~~~s~dg~~l~s~~~dg~i~iw~~ 378 (401)
T 4aez_A 350 ----TRVLYSALSPDGRILSTAASDENLKFWRV 378 (401)
T ss_dssp ----SCCCEEEECTTSSEEEEECTTSEEEEEEC
T ss_pred ----CCEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 58999999999999999999999999984
No 85
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=6.7e-41 Score=317.91 Aligned_cols=282 Identities=12% Similarity=0.022 Sum_probs=232.6
Q ss_pred eecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCe-EEE
Q 016446 39 LNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGK-VLT 117 (389)
Q Consensus 39 l~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~-~La 117 (389)
.++ |.+.|.+++|+|+|+.|+++ +.| ..++||++..++..... .....+...+.+++|+ |+|+ +|+
T Consensus 7 ~~~-h~~~v~~~~~s~~~~~l~~~----~~d------~~v~iw~~~~~~~~~~~-~~~~~~~~~v~~~~~~-~~~~~~l~ 73 (342)
T 1yfq_A 7 EQA-PKDYISDIKIIPSKSLLLIT----SWD------GSLTVYKFDIQAKNVDL-LQSLRYKHPLLCCNFI-DNTDLQIY 73 (342)
T ss_dssp SSC-CSSCEEEEEEEGGGTEEEEE----ETT------SEEEEEEEETTTTEEEE-EEEEECSSCEEEEEEE-ESSSEEEE
T ss_pred ccC-CCCcEEEEEEcCCCCEEEEE----cCC------CeEEEEEeCCCCccccc-eeeeecCCceEEEEEC-CCCCcEEE
Confidence 344 46899999999999999994 466 78999999887621001 1112455667889998 8999 999
Q ss_pred EecCCCeEEEEeC-CCCeEEE-Ee--cCCcEEEEEEcCCceEEEEecCCCCeeEEEEEcCC---------CeEEEEEeec
Q 016446 118 YSAQDSIYKVFDL-KNYTMLY-SI--SDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIED---------GTVLKVFYHL 184 (389)
Q Consensus 118 s~s~D~tiklWdl-~~g~~l~-tl--~~~~V~~vafS~g~~la~~~~~s~d~tiklWd~~t---------G~~l~tl~~~ 184 (389)
+|+.|++|++||+ .++++.. .. +...|.+++|+|+.+|++++ .|++|++||+.+ ++++.++. |
T Consensus 74 ~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~ 149 (342)
T 1yfq_A 74 VGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAAS---WDGLIEVIDPRNYGDGVIAVKNLNSNNTK-V 149 (342)
T ss_dssp EEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEE---TTSEEEEECHHHHTTBCEEEEESCSSSSS-S
T ss_pred EEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEc---CCCeEEEEcccccccccccccCCeeeEEe-e
Confidence 9999999999999 8887632 22 45689999999988888764 458999999998 88888887 7
Q ss_pred CCceeEEEEEecCCCeEEEEeCCCcEEEEECCC-Ce--EEEEcccCCCceEEEEEcC-CCcEEEEEc-CCeEEEEeCC-C
Q 016446 185 LHRNKKVDFIEQFNEKLLVKQENENLQILDVRN-AE--LMEVSRTEFMTPSAFIFLY-ENQLFLTFR-NRTVAVWNFR-G 258 (389)
Q Consensus 185 ~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~t-g~--~~~~l~gh~~~v~sv~fsp-dg~~laS~s-D~tIklWd~~-G 258 (389)
...+..++|+ + +.+++++.|++|++||+++ ++ .......|...+.+++|+| ++++|++++ |++|+||+++ +
T Consensus 150 ~~~v~~~~~~-~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 150 KNKIFTMDTN-S--SRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp CCCEEEEEEC-S--SEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred CCceEEEEec-C--CcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 7899999997 3 3388899999999999998 55 3445568899999999999 999999999 9999999996 6
Q ss_pred ------cEEEEeccCcCCcC----CCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCC-CC
Q 016446 259 ------ELVTSFEDHLLWHP----DCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT-NC 327 (389)
Q Consensus 259 ------~~l~tl~gh~~~~~----~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH-~~ 327 (389)
+++.++++|..... ...|.+++|+|||++|++++.| |+|++||+.+++++.++.+| .
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----------g~i~vwd~~~~~~~~~~~~~h~- 294 (342)
T 1yfq_A 227 GDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD-----------GIISCWNLQTRKKIKNFAKFNE- 294 (342)
T ss_dssp CCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT-----------SCEEEEETTTTEEEEECCCCSS-
T ss_pred CcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCC-----------ceEEEEcCccHhHhhhhhcccC-
Confidence 78899999865100 0128999999999999999865 99999999999999999998 7
Q ss_pred CCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCc-EEEc
Q 016446 328 SPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGL-VHVW 387 (389)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~t-IrlW 387 (389)
..|++++ |||++||+|+.|++ .+.|
T Consensus 295 ---------------------------------~~v~~~~--~~~~~l~s~s~Dg~~~~~~ 320 (342)
T 1yfq_A 295 ---------------------------------DSVVKIA--CSDNILCLATSDDTFKTNA 320 (342)
T ss_dssp ---------------------------------SEEEEEE--ECSSEEEEEEECTHHHHCS
T ss_pred ---------------------------------CCceEec--CCCCeEEEEecCCcccccc
Confidence 5899999 99999999999998 4433
No 86
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.7e-39 Score=322.38 Aligned_cols=277 Identities=14% Similarity=0.172 Sum_probs=236.1
Q ss_pred eeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe-eecccCceeEEEecCC
Q 016446 34 RRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFVEFDDVN 112 (389)
Q Consensus 34 ~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~pd 112 (389)
.+..++.+|....+.++.| +++.|++ ++.| ..+++||+.++++ +.. ..+.+.+.+++|+ |+
T Consensus 112 ~~~~~l~~h~~~v~~~~~~--~~~~l~s----gs~d------g~i~vwd~~~~~~-----~~~~~~h~~~V~~l~~~-~~ 173 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQF--EDNYVIT----GADD------KMIRVYDSINKKF-----LLQLSGHDGGVWALKYA-HG 173 (464)
T ss_dssp CEEEEEECCSSSCEEEEEE--ETTEEEE----EETT------SCEEEEETTTTEE-----EEEECCCSSCEEEEEEC-ST
T ss_pred cceEEEcCCCCCcEEEEEE--CCCEEEE----EcCC------CcEEEEECCCCcE-----EEEEeCCCcCEEEEEEc-CC
Confidence 3566889887555676666 5689999 4577 8999999988875 222 2466677889998 78
Q ss_pred CeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc--C-CceEEEEecCCCCeeEEEEEcCCCe-----------
Q 016446 113 GKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS--P-GIMLLIFNRSSSHVPLKILSIEDGT----------- 176 (389)
Q Consensus 113 G~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS--~-g~~la~~~~~s~d~tiklWd~~tG~----------- 176 (389)
+ +|++|+.|++|++||+.+++++.++. ...|.+++|+ + +.+|++++ .|++|++||+.+++
T Consensus 174 ~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s---~d~~i~vwd~~~~~~~~~~~~~~~~ 249 (464)
T 3v7d_B 174 G-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGS---RDNTLHVWKLPKESSVPDHGEEHDY 249 (464)
T ss_dssp T-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEE---TTSCEEEEECCCCCCC------CCS
T ss_pred C-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEc---CCCcEEEeeCCCCcccccccccCCc
Confidence 8 99999999999999999999998886 4689999998 3 57787764 45899999999887
Q ss_pred ------------EEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEE
Q 016446 177 ------------VLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFL 244 (389)
Q Consensus 177 ------------~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~la 244 (389)
++..+.+|...+..+. +++..+++++.|++|++||+.+++++..+.+|...|.+++|+|++++|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 326 (464)
T 3v7d_B 250 PLVFHTPEENPYFVGVLRGHMASVRTVS---GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCI 326 (464)
T ss_dssp SEEESCGGGCTTEEEEECCCSSCEEEEE---EETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEE
T ss_pred ceEeeccCCCeEEEEEccCccceEEEEc---CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEE
Confidence 4667787777777763 5688999999999999999999999999999999999999999999999
Q ss_pred EEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEe
Q 016446 245 TFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 322 (389)
Q Consensus 245 S~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl 322 (389)
+++ |++|++||++ |+++.++++|... |.+++|+ +++|++++.| |+|++||+.+++....+
T Consensus 327 sg~~dg~i~vwd~~~~~~~~~~~~h~~~-----v~~~~~~--~~~l~s~s~d-----------g~v~vwd~~~~~~~~~~ 388 (464)
T 3v7d_B 327 SASMDTTIRIWDLENGELMYTLQGHTAL-----VGLLRLS--DKFLVSAAAD-----------GSIRGWDANDYSRKFSY 388 (464)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSC-----EEEEEEC--SSEEEEEETT-----------SEEEEEETTTCCEEEEE
T ss_pred EEeCCCcEEEEECCCCcEEEEEeCCCCc-----EEEEEEc--CCEEEEEeCC-----------CcEEEEECCCCceeeee
Confidence 999 9999999996 9999999999887 7999997 6899999875 99999999998887666
Q ss_pred cCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 323 NATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 323 ~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
. |. ..+..++|+|+|+.|++|+ |++|++||.
T Consensus 389 ~-~~----------------------------------~~~~~~~~~~~~~~l~~~~-dg~i~iwd~ 419 (464)
T 3v7d_B 389 H-HT----------------------------------NLSAITTFYVSDNILVSGS-ENQFNIYNL 419 (464)
T ss_dssp E-CT----------------------------------TCCCEEEEEECSSEEEEEE-TTEEEEEET
T ss_pred c-CC----------------------------------CCccEEEEEeCCCEEEEec-CCeEEEEEC
Confidence 4 33 3677899999999999999 999999984
No 87
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=317.05 Aligned_cols=282 Identities=11% Similarity=0.104 Sum_probs=227.9
Q ss_pred cccEEEEEee--c-cEEEEEec---CceEEEEecccceeeeeeecCCcceEEEEEEeeC---CCEEEEEEEeecCCCcce
Q 016446 3 RTKVIEIVAA--R-DIVFALAH---SGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKN---NDSLITVSVYASDNFSSL 73 (389)
Q Consensus 3 ~~~v~~i~~~--~-~~~a~~~~---~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spd---g~~l~s~s~~~~~d~~~l 73 (389)
...|.+|.|+ + .++++++. ||+|++|+..++++.......|...|.+++|+|+ |+.|++ ++.|
T Consensus 18 ~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~----~~~d---- 89 (357)
T 3i2n_A 18 NYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLAT----GDFG---- 89 (357)
T ss_dssp SSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEE----EETT----
T ss_pred CCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEE----ecCC----
Confidence 3578999999 4 56667776 9999999999888876655445689999999999 799998 4567
Q ss_pred eeeeeeEeEeccCC-CCCcceeEeeecccCceeEE------EecCCCeEEEEecCCCeEEEEeCCCCe-EEEEec---C-
Q 016446 74 KCRSTKIEYIRRGK-PDSGFALFESESLKWPGFVE------FDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSIS---D- 141 (389)
Q Consensus 74 ~~~~~~l~~i~~g~-~~~~~~l~~~~~~~~~~~v~------Fs~pdG~~Las~s~D~tiklWdl~~g~-~l~tl~---~- 141 (389)
..+++|++..++ .. . .+ ..+...+.+++ |+ |+|++|++++.|++|++||+.+++ ++.++. +
T Consensus 90 --g~i~iwd~~~~~~~~--~-~~-~~~~~~v~~~~~~~~~~~s-~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 162 (357)
T 3i2n_A 90 --GNLHIWNLEAPEMPV--Y-SV-KGHKEIINAIDGIGGLGIG-EGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGE 162 (357)
T ss_dssp --SCEEEECTTSCSSCS--E-EE-CCCSSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTS
T ss_pred --CeEEEEeCCCCCccE--E-EE-EecccceEEEeeccccccC-CCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCC
Confidence 789999998887 31 1 12 13444566674 55 899999999999999999999887 666664 1
Q ss_pred --CcEEEEE----Ec-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEec--CCCeEEEEeCCCcEEE
Q 016446 142 --KHVQEIK----IS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQ--FNEKLLVKQENENLQI 212 (389)
Q Consensus 142 --~~V~~va----fS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~--~~~~l~~~s~D~tIkl 212 (389)
..|++++ |+ ++.+|++++ .|++|++||+++++++.. ..|...+..++|++. ++..+++++.|++|++
T Consensus 163 ~~~~v~~~~~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i 238 (357)
T 3i2n_A 163 NKRDCWTVAFGNAYNQEERVVCAGY---DNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHV 238 (357)
T ss_dssp CCCCEEEEEEECCCC-CCCEEEEEE---TTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEE
T ss_pred CCCceEEEEEEeccCCCCCEEEEEc---cCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEE
Confidence 2799999 67 588888764 458999999999998655 457789999999832 7899999999999999
Q ss_pred EECCCCeEEEEcc-----cCCCceEEEEEcCCCc-EEEEEc-CCeEEEEeCC-C-------------------cEEEEec
Q 016446 213 LDVRNAELMEVSR-----TEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNFR-G-------------------ELVTSFE 265 (389)
Q Consensus 213 Wd~~tg~~~~~l~-----gh~~~v~sv~fspdg~-~laS~s-D~tIklWd~~-G-------------------~~l~tl~ 265 (389)
||+++++++..+. +|...|.+++|+|+++ +|++++ |++|++||++ + +++.++.
T Consensus 239 ~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 318 (357)
T 3i2n_A 239 FDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVT 318 (357)
T ss_dssp EEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEE
T ss_pred EeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccc
Confidence 9999988765554 9999999999999999 899998 9999999985 3 4788999
Q ss_pred cCcCCcCCCCeeEEEECCCCCEEE-EEecCCCcccccCCCCCeEEEEeCCCCeEE
Q 016446 266 DHLLWHPDCNTNNIYITSDQDLII-SYCKAEPEDQWMEGSAGSINVSSILTGKCL 319 (389)
Q Consensus 266 gh~~~~~~~~v~sv~fSpdG~~la-S~s~D~~~~~~~~s~D~tIklWd~~tg~~l 319 (389)
+|..+ |.+++|+|||++|| |++.| ++|+|||+.+.+++
T Consensus 319 ~~~~~-----v~~~~~s~~~~~l~~s~~~d-----------~~i~iw~~~~~~~i 357 (357)
T 3i2n_A 319 LSTQP-----ISSLDWSPDKRGLCVCSSFD-----------QTVRVLIVTKLNKI 357 (357)
T ss_dssp CCSSC-----EEEEEECSSSTTEEEEEETT-----------SEEEEEEECC----
T ss_pred cCCCC-----eeEEEEcCCCCeEEEEecCC-----------CcEEEEECCCcccC
Confidence 99877 89999999999999 78764 99999999876653
No 88
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=325.52 Aligned_cols=315 Identities=13% Similarity=0.168 Sum_probs=229.5
Q ss_pred CcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCC-----Cc---ceeEeeecc------------cC
Q 016446 43 PDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPD-----SG---FALFESESL------------KW 102 (389)
Q Consensus 43 ~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~-----~~---~~l~~~~~~------------~~ 102 (389)
+.+.|.+|+|+|+|+.||+ ++.| ..++||++..++.. .. ...+. .+. ..
T Consensus 27 ~~~~V~~v~~s~~g~~la~----g~~d------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~ 95 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLAT----GDKG------GRVVIFQQEQENKIQSHSRGEYNVYSTFQ-SHEPEFDYLKSLEIEEK 95 (447)
T ss_dssp GGGSEEEEEECSSSSEEEE----EETT------SEEEEEEECC-----CCCCCCEEEEEEEE-CCCCEEEGGGTEEECCC
T ss_pred ccCcEEEEEECCCCCEEEE----EcCC------CeEEEEEecCCCCCCcccccceeEecccc-cccccccccccccccCc
Confidence 3589999999999999999 5577 88999999877621 00 11111 232 45
Q ss_pred ceeEEEecCCC--eEEEEecCCCeEEEEeCCCCeEE---------------------------------------EEe--
Q 016446 103 PGFVEFDDVNG--KVLTYSAQDSIYKVFDLKNYTML---------------------------------------YSI-- 139 (389)
Q Consensus 103 ~~~v~Fs~pdG--~~Las~s~D~tiklWdl~~g~~l---------------------------------------~tl-- 139 (389)
+.+++|+ |++ .+|++++.|++|+|||+.++++. ..+
T Consensus 96 V~~l~~~-~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (447)
T 3dw8_B 96 INKIRWL-PQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFAN 174 (447)
T ss_dssp CCEEEEC-CCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECS
T ss_pred eEEEEEc-CCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEecc
Confidence 7889998 888 79999999999999999775542 122
Q ss_pred -cCCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcC-CCeEEEE-------EeecCCceeEEEEEecCC-CeEEEEeCCC
Q 016446 140 -SDKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIE-DGTVLKV-------FYHLLHRNKKVDFIEQFN-EKLLVKQENE 208 (389)
Q Consensus 140 -~~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~-tG~~l~t-------l~~~~~~~~~v~f~~~~~-~~l~~~s~D~ 208 (389)
|...|.+++|+ +|.+||++ .|++|+|||+. ++++++. +.+|...+..++|+ |++ ..+++++.|+
T Consensus 175 ~h~~~v~~~~~~~~~~~l~s~----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~l~s~~~dg 249 (447)
T 3dw8_B 175 AHTYHINSISINSDYETYLSA----DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFH-PNSCNTFVYSSSKG 249 (447)
T ss_dssp CCSSCCCEEEECTTSSEEEEE----CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEEC-SSCTTEEEEEETTS
T ss_pred CCCcceEEEEEcCCCCEEEEe----CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEEC-CCCCcEEEEEeCCC
Confidence 35689999999 57888764 26899999999 5666664 45788899999998 666 8899999999
Q ss_pred cEEEEECCCCeE----EEEcccCCC------------ceEEEEEcCCCcEEEEEcCCeEEEEeCC--CcEEEEeccCcCC
Q 016446 209 NLQILDVRNAEL----MEVSRTEFM------------TPSAFIFLYENQLFLTFRNRTVAVWNFR--GELVTSFEDHLLW 270 (389)
Q Consensus 209 tIklWd~~tg~~----~~~l~gh~~------------~v~sv~fspdg~~laS~sD~tIklWd~~--G~~l~tl~gh~~~ 270 (389)
+|+|||++++++ ++.+.+|.. .|.+++|+|+|++|+++++++|+|||+. ++++.++.+|...
T Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~ 329 (447)
T 3dw8_B 250 TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYL 329 (447)
T ss_dssp CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGG
T ss_pred eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeeccccc
Confidence 999999999997 788999987 9999999999999999988999999994 8899999999753
Q ss_pred cC--------CC--CeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCC
Q 016446 271 HP--------DC--NTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSST 340 (389)
Q Consensus 271 ~~--------~~--~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~ 340 (389)
.. ++ .+..++|+|||++||+|+.| |+|+|||+.+++++ ++.+|..........++...
T Consensus 330 ~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d-----------g~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 397 (447)
T 3dw8_B 330 RSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN-----------NFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKV 397 (447)
T ss_dssp TTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST-----------TEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCE
T ss_pred cccccccccccccccceEEEECCCCCEEEEeccC-----------CEEEEEEcCCCcce-eeeecccccccccccCCccc
Confidence 11 00 02349999999999998764 99999999999887 77777632111111111000
Q ss_pred CCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEcc
Q 016446 341 GKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
....+-.+ .......-.....|..++|+|+|++||+|+.|+ +.+|.
T Consensus 398 ~~~~~~~~-~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~ 443 (447)
T 3dw8_B 398 CASGKRKK-DEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQ 443 (447)
T ss_dssp ECSSCCCT-TCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEE
T ss_pred cccCCccc-ccccccccccCCceeEEEECCCCCEEEEEecce-eeeec
Confidence 00000000 000000111235799999999999999999988 55664
No 89
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-39 Score=299.08 Aligned_cols=279 Identities=12% Similarity=0.170 Sum_probs=231.7
Q ss_pred cccEEEEEee-ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEe
Q 016446 3 RTKVIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 81 (389)
Q Consensus 3 ~~~v~~i~~~-~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~ 81 (389)
+..|..|.|. +++||+++.||+|++|+..+++++..+..|. ..|.+++|+|+|+.|+++ +.| ..+++|
T Consensus 18 ~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~----~~d------g~i~~~ 86 (313)
T 3odt_A 18 DQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQ-GFLNSVCYDSEKELLLFG----GKD------TMINGV 86 (313)
T ss_dssp SSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECS-SCEEEEEEETTTTEEEEE----ETT------SCEEEE
T ss_pred CCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCC-ccEEEEEECCCCCEEEEe----cCC------CeEEEE
Confidence 4578889887 8899999999999999999999999999875 899999999999999994 466 778888
Q ss_pred EeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEcC--CceEEE
Q 016446 82 YIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP--GIMLLI 157 (389)
Q Consensus 82 ~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS~--g~~la~ 157 (389)
++...........+ ..+...+.+++|+ +++|++++.|++|++|| .++++..+. ...|.+++|+| +.++++
T Consensus 87 ~~~~~~~~~~~~~~-~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 160 (313)
T 3odt_A 87 PLFATSGEDPLYTL-IGHQGNVCSLSFQ---DGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLT 160 (313)
T ss_dssp ETTCCTTSCC-CEE-CCCSSCEEEEEEE---TTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEE
T ss_pred EeeecCCCCcccch-hhcccCEEEEEec---CCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEE
Confidence 88654321111111 2345556778884 67999999999999999 677766664 57899999984 888887
Q ss_pred EecCCCCeeEEEEEcCCCeEEEEEee-cCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEE
Q 016446 158 FNRSSSHVPLKILSIEDGTVLKVFYH-LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIF 236 (389)
Q Consensus 158 ~~~~s~d~tiklWd~~tG~~l~tl~~-~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~f 236 (389)
++ .|++|++|| .++++.++.. |...+..++|+ |++ .+++++.|++|++||+++++++..+.+|...|.+++|
T Consensus 161 ~~---~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~-~~~-~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 233 (313)
T 3odt_A 161 AS---ADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVV-DDG-HFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKL 233 (313)
T ss_dssp EE---TTSCEEEEE--TTEEEEEECSSCSSCEEEEEEE-ETT-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred EE---CCCCEEEEe--cCceEEEEeccCcccEEEEEEc-CCC-eEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEE
Confidence 74 458999999 6789999987 88999999998 444 4889999999999999999999999999999999999
Q ss_pred cCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCC
Q 016446 237 LYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL 314 (389)
Q Consensus 237 spdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~ 314 (389)
+|+|+ |++++ |++|++||+. ++++.++..|... |.+++|+|||+++ +++. |++|+|||+.
T Consensus 234 ~~~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~-----i~~~~~~~~~~~~-~~~~-----------dg~i~iw~~~ 295 (313)
T 3odt_A 234 LPNGD-IVSCGEDRTVRIWSKENGSLKQVITLPAIS-----IWSVDCMSNGDII-VGSS-----------DNLVRIFSQE 295 (313)
T ss_dssp CTTSC-EEEEETTSEEEEECTTTCCEEEEEECSSSC-----EEEEEECTTSCEE-EEET-----------TSCEEEEESC
T ss_pred ecCCC-EEEEecCCEEEEEECCCCceeEEEeccCce-----EEEEEEccCCCEE-EEeC-----------CCcEEEEeCC
Confidence 99995 66776 9999999996 9999999999876 8999999999955 5655 5999999999
Q ss_pred CCeEEEEec
Q 016446 315 TGKCLAKIN 323 (389)
Q Consensus 315 tg~~l~tl~ 323 (389)
+++++....
T Consensus 296 ~~~~~~~~~ 304 (313)
T 3odt_A 296 KSRWASEDE 304 (313)
T ss_dssp GGGCCC---
T ss_pred CCceeehhh
Confidence 988765543
No 90
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.7e-41 Score=323.68 Aligned_cols=255 Identities=13% Similarity=0.107 Sum_probs=201.3
Q ss_pred eecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe-eecccCceeEEEecC-CCeEE
Q 016446 39 LNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFVEFDDV-NGKVL 116 (389)
Q Consensus 39 l~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~p-dG~~L 116 (389)
+.+| .+.|++|+|+|+|+.||+ ++.| .+++|||+..++. ..+.. ..|...+.+|+|++| +|++|
T Consensus 9 ~~~H-~~~V~~v~~s~~g~~las----gs~D------~~v~lwd~~~~~~---~~~~~l~gH~~~V~~v~~~~~~~~~~l 74 (316)
T 3bg1_A 9 DTSH-EDMIHDAQMDYYGTRLAT----CSSD------RSVKIFDVRNGGQ---ILIADLRGHEGPVWQVAWAHPMYGNIL 74 (316)
T ss_dssp ------CCEEEEEECGGGCEEEE----EETT------TEEEEEEEETTEE---EEEEEEECCSSCEEEEEECCGGGSSCE
T ss_pred cccc-cCeEEEeeEcCCCCEEEE----EeCC------CeEEEEEecCCCc---EEEEEEcCCCccEEEEEeCCCCCCCEE
Confidence 4454 599999999999999999 4577 8999999987752 11222 245666788999844 59999
Q ss_pred EEecCCCeEEEEeCCCCe--EEEEec--CCcEEEEEEcC---CceEEEEecCCCCeeEEEEEcCCCe---EEEEEeecCC
Q 016446 117 TYSAQDSIYKVFDLKNYT--MLYSIS--DKHVQEIKISP---GIMLLIFNRSSSHVPLKILSIEDGT---VLKVFYHLLH 186 (389)
Q Consensus 117 as~s~D~tiklWdl~~g~--~l~tl~--~~~V~~vafS~---g~~la~~~~~s~d~tiklWd~~tG~---~l~tl~~~~~ 186 (389)
||||.|++|||||+.+++ ++.++. ...|.+|+|+| |.+||++ +.|++|+|||+.++. ++..+.+|..
T Consensus 75 ~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasg---s~D~~i~lwd~~~~~~~~~~~~~~~h~~ 151 (316)
T 3bg1_A 75 ASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACG---SSDGAISLLTYTGEGQWEVKKINNAHTI 151 (316)
T ss_dssp EEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEE---CSSSCEEEEEECSSSCEEECCBTTSSSS
T ss_pred EEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEE---cCCCCEEEEecCCCCCcceeeeeccccC
Confidence 999999999999999874 566664 46899999995 6788876 456899999998763 2456678888
Q ss_pred ceeEEEEEecC----------------CCeEEEEeCCCcEEEEECCCC---eEEEEcccCCCceEEEEEcCCC----cEE
Q 016446 187 RNKKVDFIEQF----------------NEKLLVKQENENLQILDVRNA---ELMEVSRTEFMTPSAFIFLYEN----QLF 243 (389)
Q Consensus 187 ~~~~v~f~~~~----------------~~~l~~~s~D~tIklWd~~tg---~~~~~l~gh~~~v~sv~fspdg----~~l 243 (389)
.+..++|++.. +.+|++++.|++|||||++++ ++++++.+|...|++|+|+|++ ++|
T Consensus 152 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~l 231 (316)
T 3bg1_A 152 GCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTI 231 (316)
T ss_dssp CBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEE
T ss_pred CcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceE
Confidence 99999998421 357888999999999999865 5788899999999999999997 899
Q ss_pred EEEc-CCeEEEEeCCC----c-EEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCC-CC
Q 016446 244 LTFR-NRTVAVWNFRG----E-LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL-TG 316 (389)
Q Consensus 244 aS~s-D~tIklWd~~G----~-~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~-tg 316 (389)
||++ |++|+|||++. + ..+.+.+|..+ |++++|||||++||+++.| ++||||+.. .|
T Consensus 232 as~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~-----v~~v~~sp~g~~las~~~D-----------~~v~lw~~~~~g 295 (316)
T 3bg1_A 232 ASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDV-----VWHVSWSITANILAVSGGD-----------NKVTLWKESVDG 295 (316)
T ss_dssp EEEETTCEEEEEECSSTTCCCCBCCEEEECSSC-----EEEEEECTTTCCEEEEESS-----------SCEEEEEECTTS
T ss_pred EEEcCCCeEEEEEccCccccchhhhhhhcCCCc-----EEEEEEcCCCCEEEEEcCC-----------CeEEEEEECCCC
Confidence 9999 99999999852 1 23456778765 8999999999999999875 999999975 34
Q ss_pred --eEEEEecCCC
Q 016446 317 --KCLAKINATN 326 (389)
Q Consensus 317 --~~l~tl~gH~ 326 (389)
+|+.++...+
T Consensus 296 ~~~~~~~~~~~~ 307 (316)
T 3bg1_A 296 QWVCISDVNKGQ 307 (316)
T ss_dssp CEEEEEECC---
T ss_pred cEEEeeeccCCC
Confidence 5777777655
No 91
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.1e-39 Score=346.23 Aligned_cols=284 Identities=12% Similarity=0.082 Sum_probs=245.2
Q ss_pred eeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCe
Q 016446 35 RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGK 114 (389)
Q Consensus 35 ~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~ 114 (389)
..+++.+|. +.|.+++|||+|+.||++ +.| ..++||++.+|+.. ..+ ..+.+.+.+++|+ |||+
T Consensus 5 ~~~~~~~h~-~~v~~i~~sp~~~~la~~----~~~------g~v~iwd~~~~~~~--~~~--~~~~~~v~~~~~s-~~~~ 68 (814)
T 3mkq_A 5 IKKTFSNRS-DRVKGIDFHPTEPWVLTT----LYS------GRVEIWNYETQVEV--RSI--QVTETPVRAGKFI-ARKN 68 (814)
T ss_dssp CEEEEEEEC-SCEEEEEECSSSSEEEEE----ETT------SEEEEEETTTTEEE--EEE--ECCSSCEEEEEEE-GGGT
T ss_pred cceeeecCC-CceEEEEECCCCCEEEEE----eCC------CEEEEEECCCCceE--EEE--ecCCCcEEEEEEe-CCCC
Confidence 456788875 899999999999999994 466 78999999888751 112 2355667889998 8999
Q ss_pred EEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCC-eEEEEEeecCCceeE
Q 016446 115 VLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDG-TVLKVFYHLLHRNKK 190 (389)
Q Consensus 115 ~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG-~~l~tl~~~~~~~~~ 190 (389)
+||+++.|++|+|||+.+++++.++. ...|.+++|+ +|.+|++++ .|++|++||+.++ ++..++.+|.+.+..
T Consensus 69 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~dg~i~vw~~~~~~~~~~~~~~~~~~v~~ 145 (814)
T 3mkq_A 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS---DDLTVKLWNWENNWALEQTFEGHEHFVMC 145 (814)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE---TTSEEEEEEGGGTSEEEEEEECCSSCEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEc---CCCEEEEEECCCCceEEEEEcCCCCcEEE
Confidence 99999999999999999999988875 4689999999 577888764 4589999999997 888999999999999
Q ss_pred EEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCC-CceEEEEEcC--CCcEEEEEc-CCeEEEEeCC-CcEEEEec
Q 016446 191 VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEF-MTPSAFIFLY--ENQLFLTFR-NRTVAVWNFR-GELVTSFE 265 (389)
Q Consensus 191 v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~-~~v~sv~fsp--dg~~laS~s-D~tIklWd~~-G~~l~tl~ 265 (389)
++|++.++..+++++.|++|++||+.++++...+..|. ..+..++|+| ++++|++++ |++|++||+. ++++.++.
T Consensus 146 ~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 225 (814)
T 3mkq_A 146 VAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE 225 (814)
T ss_dssp EEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEc
Confidence 99994367889999999999999999998877776655 8999999999 999999998 9999999997 99999999
Q ss_pred cCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccc
Q 016446 266 DHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKK 345 (389)
Q Consensus 266 gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~ 345 (389)
+|... |.+++|+|||++|++++.| |+|++||+.+++++.++..|.
T Consensus 226 ~~~~~-----v~~~~~~~~~~~l~~~~~d-----------g~v~vwd~~~~~~~~~~~~~~------------------- 270 (814)
T 3mkq_A 226 GHMSN-----VSFAVFHPTLPIIISGSED-----------GTLKIWNSSTYKVEKTLNVGL------------------- 270 (814)
T ss_dssp CCSSC-----EEEEEECSSSSEEEEEETT-----------SCEEEEETTTCSEEEEECCSS-------------------
T ss_pred CCCCC-----EEEEEEcCCCCEEEEEeCC-----------CeEEEEECCCCcEEEEeecCC-------------------
Confidence 99876 8999999999999999865 999999999999999999987
Q ss_pred cccccceecccccccCCEEEEEECCCCC--EEEEecCCCcEEEcc
Q 016446 346 LNKSSYIRSTVGEALEDITSLFYDEERN--EIYTGNRHGLVHVWS 388 (389)
Q Consensus 346 ~~~~~~~~~~~~~~~~~V~svafSpdg~--~LaSgs~D~tIrlW~ 388 (389)
..|++++|+|+|+ .+++|+ |+.+.+|+
T Consensus 271 ---------------~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~ 299 (814)
T 3mkq_A 271 ---------------ERSWCIATHPTGRKNYIASGF-DNGFTVLS 299 (814)
T ss_dssp ---------------SSEEEEEECTTCGGGEEEEEE-TTEEEEEE
T ss_pred ---------------CcEEEEEEccCCCceEEEEEe-CCCEEEEE
Confidence 5899999999997 466665 55566665
No 92
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.3e-39 Score=304.58 Aligned_cols=270 Identities=15% Similarity=0.153 Sum_probs=205.0
Q ss_pred ecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCC----eEEEEec--CCcEEEEEEcC---CceEEEEecCCCCeeEE
Q 016446 98 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY----TMLYSIS--DKHVQEIKISP---GIMLLIFNRSSSHVPLK 168 (389)
Q Consensus 98 ~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g----~~l~tl~--~~~V~~vafS~---g~~la~~~~~s~d~tik 168 (389)
.|...+.+++|+ |||++||+|+.|++|+|||+.++ +++.++. ...|.+++|+| +.+|++++ .|++|+
T Consensus 9 gH~~~v~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~---~dg~v~ 84 (351)
T 3f3f_A 9 GHDDLVHDVVYD-FYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASAS---YDKTVK 84 (351)
T ss_dssp CCSSCEEEEEEC-SSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEE---TTSCEE
T ss_pred ccccceeEEEEc-CCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEc---CCCeEE
Confidence 455667889998 89999999999999999999876 4556654 57899999996 88998874 458999
Q ss_pred EEEcCCC---------eEEEEEeecCCceeEEEEEecC--CCeEEEEeCCCcEEEEECCCCeEEEEcc------------
Q 016446 169 ILSIEDG---------TVLKVFYHLLHRNKKVDFIEQF--NEKLLVKQENENLQILDVRNAELMEVSR------------ 225 (389)
Q Consensus 169 lWd~~tG---------~~l~tl~~~~~~~~~v~f~~~~--~~~l~~~s~D~tIklWd~~tg~~~~~l~------------ 225 (389)
+||+.++ +++.++..|...+..++|+ |+ +..+++++.|++|++||++++++++.+.
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFA-PAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEEC-CGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEc-CCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 9999998 7899999999999999998 66 7889999999999999999988765543
Q ss_pred -cCCCceEEEEEcCC---CcEEEEEc-CCeEEEEeCC-CcE--EEEeccCcCCcCCCCeeEEEECCCC----CEEEEEec
Q 016446 226 -TEFMTPSAFIFLYE---NQLFLTFR-NRTVAVWNFR-GEL--VTSFEDHLLWHPDCNTNNIYITSDQ----DLIISYCK 293 (389)
Q Consensus 226 -gh~~~v~sv~fspd---g~~laS~s-D~tIklWd~~-G~~--l~tl~gh~~~~~~~~v~sv~fSpdG----~~laS~s~ 293 (389)
+|...+.+++|+|+ +++|++++ |+.+.+|+.. ++. +.++.+|... |.+++|+|+| ++||+|+.
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----i~~~~~~p~~~~~~~~l~s~~~ 238 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSL-----IRSISWAPSIGRWYQLIATGCK 238 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSC-----EEEEEECCCSSCSSEEEEEEET
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcc-----eeEEEECCCCCCcceEEEEEcC
Confidence 78999999999997 99999998 9999888876 664 8889999877 8999999999 89999987
Q ss_pred CCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCC----------CCCCCccccc--cccceecccccccC
Q 016446 294 AEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGS----------SSTGKSKKLN--KSSYIRSTVGEALE 361 (389)
Q Consensus 294 D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~----------~~~~~~~~~~--~~~~~~~~~~~~~~ 361 (389)
| ++|+|||+.++.+......+............ ++......++ ........+.+|..
T Consensus 239 d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 307 (351)
T 3f3f_A 239 D-----------GRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNG 307 (351)
T ss_dssp T-----------SCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSS
T ss_pred C-----------CeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccc
Confidence 5 99999999887443332222110000000000 0000000000 01223333444557
Q ss_pred CEEEEEECCCCCEEEEecCCCcEEEcc
Q 016446 362 DITSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 362 ~V~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
.|++++|+|||++||||+.||+|++|+
T Consensus 308 ~v~~~~~s~~~~~l~s~~~dg~v~iw~ 334 (351)
T 3f3f_A 308 EVWSVSWNLTGTILSSAGDDGKVRLWK 334 (351)
T ss_dssp CEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred cEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 999999999999999999999999997
No 93
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=297.25 Aligned_cols=269 Identities=11% Similarity=0.149 Sum_probs=217.0
Q ss_pred EEee-ccEEEEEecCceEEEEecccceeeeeeecC-CcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccC
Q 016446 9 IVAA-RDIVFALAHSGVCAAFSRETNRRICFLNVS-PDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRG 86 (389)
Q Consensus 9 i~~~-~~~~a~~~~~gtiklW~~~tg~~l~tl~~~-~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g 86 (389)
|-++ +.+||++ .|++|||||.++|++++++..+ |...|.+|+|+|+|+.||+ ++.| ..++||++.+|
T Consensus 31 l~WS~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~s----gs~D------g~v~iw~~~~~ 99 (318)
T 4ggc_A 31 VDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV----GTSS------AEVQLWDVQQQ 99 (318)
T ss_dssp EEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE----EETT------SEEEEEETTTT
T ss_pred EEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEE----EECC------CcEEEeecCCc
Confidence 5566 6677776 4999999999999999988753 4578999999999999999 5577 89999999998
Q ss_pred CCCCcceeEe-eecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCe-EEEEec--CCcEEEEEEc-CCceEEEEecC
Q 016446 87 KPDSGFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSIS--DKHVQEIKIS-PGIMLLIFNRS 161 (389)
Q Consensus 87 ~~~~~~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~-~l~tl~--~~~V~~vafS-~g~~la~~~~~ 161 (389)
++ +.. ..+... ..+++ +++++|++++.|+.+++|+..++. .+.++. ...+..++|+ +|.+|++++
T Consensus 100 ~~-----~~~~~~h~~~--~~~~~-~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-- 169 (318)
T 4ggc_A 100 KR-----LRNMTSHSAR--VGSLS-WNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG-- 169 (318)
T ss_dssp EE-----EEEEECCSSC--EEEEE-EETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE--
T ss_pred ee-----EEEecCccce--EEEee-cCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEe--
Confidence 76 222 122232 24555 578899999999999999988765 555554 5789999999 688888764
Q ss_pred CCCeeEEEEEcCCCeE----EEEEeecCCceeEEEEEecCCCeEEE--EeCCCcEEEEECCCCeEEEEcccCCCceEEEE
Q 016446 162 SSHVPLKILSIEDGTV----LKVFYHLLHRNKKVDFIEQFNEKLLV--KQENENLQILDVRNAELMEVSRTEFMTPSAFI 235 (389)
Q Consensus 162 s~d~tiklWd~~tG~~----l~tl~~~~~~~~~v~f~~~~~~~l~~--~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~ 235 (389)
.|++|+|||+.+|+. +.....|.+.+..+++.+..+..+.. ++.|++|+|||.++++..... .|...+..++
T Consensus 170 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~ 247 (318)
T 4ggc_A 170 -NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSIL 247 (318)
T ss_dssp -TTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEE
T ss_pred -cCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeee
Confidence 458999999998874 35556677889999998433344333 458999999999998887764 4666899999
Q ss_pred EcCCCcEEEEE--c-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEE
Q 016446 236 FLYENQLFLTF--R-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVS 311 (389)
Q Consensus 236 fspdg~~laS~--s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklW 311 (389)
|+|+++.++++ + |++|+|||++ |+++++|++|..+ |++|+|||||++|||||.| ++||||
T Consensus 248 ~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~-----V~~l~~spdg~~l~S~s~D-----------~~v~iW 311 (318)
T 4ggc_A 248 WSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR-----VLSLTMSPDGATVASAAAD-----------ETLRLW 311 (318)
T ss_dssp EETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC-----EEEEEECTTSSCEEEEETT-----------TEEEEE
T ss_pred ecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCC-----EEEEEEcCCCCEEEEEecC-----------CeEEEE
Confidence 99999988765 4 9999999997 9999999999987 8999999999999999875 999999
Q ss_pred eCCCC
Q 016446 312 SILTG 316 (389)
Q Consensus 312 d~~tg 316 (389)
|+.+.
T Consensus 312 d~~~~ 316 (318)
T 4ggc_A 312 RCFEL 316 (318)
T ss_dssp CCSCC
T ss_pred ECCCC
Confidence 98754
No 94
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=8.2e-41 Score=334.40 Aligned_cols=279 Identities=12% Similarity=0.095 Sum_probs=216.7
Q ss_pred ccEEEEEee---ccEEEEEecCceEEEEecccceeee--eeecCCcceEEEEEEee-CCCEEEEEEEeecCCCcceeeee
Q 016446 4 TKVIEIVAA---RDIVFALAHSGVCAAFSRETNRRIC--FLNVSPDEVIRSLFYNK-NNDSLITVSVYASDNFSSLKCRS 77 (389)
Q Consensus 4 ~~v~~i~~~---~~~~a~~~~~gtiklW~~~tg~~l~--tl~~~~~~~v~sv~~sp-dg~~l~s~s~~~~~d~~~l~~~~ 77 (389)
.+|.+|.|. +.+||+++.||+|+|||+.+++..+ .+.+| ...|.+|+|+| +++.|++ ++.| .+
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH-~~~V~~l~f~p~~~~~l~s----~s~D------~~ 188 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGA-GGSITGLKFNPLNTNQFYA----SSME------GT 188 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSS-SCCCCEEEECSSCTTEEEE----ECSS------SC
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCC-CCCEEEEEEeCCCCCEEEE----EeCC------CE
Confidence 359999997 5689999999999999998776544 45565 48999999998 6899999 5677 88
Q ss_pred eeEeEeccCCCCCcceeEe-eecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEcC-Cc
Q 016446 78 TKIEYIRRGKPDSGFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP-GI 153 (389)
Q Consensus 78 ~~l~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS~-g~ 153 (389)
++|||+..+.+ ..+.. +....++.+++|+ |+|++||+|+.|++|++||+ .++++.++. ...|.+|+|+| +.
T Consensus 189 v~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~l~~g~~dg~i~~wd~-~~~~~~~~~~h~~~v~~v~~~p~~~ 263 (435)
T 4e54_B 189 TRLQDFKGNIL---RVFASSDTINIWFCSLDVS-ASSRMVVTGDNVGNVILLNM-DGKELWNLRMHKKKVTHVALNPCCD 263 (435)
T ss_dssp EEEEETTSCEE---EEEECCSSCSCCCCCEEEE-TTTTEEEEECSSSBEEEEES-SSCBCCCSBCCSSCEEEEEECTTCS
T ss_pred EEEeeccCCce---eEEeccCCCCccEEEEEEC-CCCCEEEEEeCCCcEeeecc-CcceeEEEecccceEEeeeecCCCc
Confidence 99999865543 11222 2233446679998 89999999999999999998 466666664 57899999995 54
Q ss_pred -eEEEEecCCCCeeEEEEEcCCCeEEEEE---eecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCC
Q 016446 154 -MLLIFNRSSSHVPLKILSIEDGTVLKVF---YHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFM 229 (389)
Q Consensus 154 -~la~~~~~s~d~tiklWd~~tG~~l~tl---~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~ 229 (389)
+|+++ +.|++|+|||+.+++....+ .+|...|.+|+|+ |++.+|++++.|++|+|||+.++++...+.+|..
T Consensus 264 ~~~~s~---s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~s-pdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~ 339 (435)
T 4e54_B 264 WFLATA---SVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS-PDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPH 339 (435)
T ss_dssp SEEEEE---ETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBC-TTSSEEEEEESSSCEEEEESSSSSSEEEECCCCC
T ss_pred eEEEEe---cCcceeeEEecccccccceEEEeeeccccccceeEC-CCCCeeEEEcCCCEEEEEECCCCccceEEecccc
Confidence 56555 45689999999988765544 4788899999998 7889999999999999999999999888877753
Q ss_pred c------eEEEEEcCCCcEEEEEc-------------CCeEEEEeCC-CcEEEEec-cCcCCcCCCCeeEE-EECCCCCE
Q 016446 230 T------PSAFIFLYENQLFLTFR-------------NRTVAVWNFR-GELVTSFE-DHLLWHPDCNTNNI-YITSDQDL 287 (389)
Q Consensus 230 ~------v~sv~fspdg~~laS~s-------------D~tIklWd~~-G~~l~tl~-gh~~~~~~~~v~sv-~fSpdG~~ 287 (389)
. +..++|+|++.+++++. +++|++||.+ |+++.++. +|... |.++ +|||||++
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~-----v~s~~~fspdg~~ 414 (435)
T 4e54_B 340 RHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSG-----ISSLNEFNPMGDT 414 (435)
T ss_dssp CCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCC-----CCCEEEECTTSSC
T ss_pred cccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCc-----EEEEEEECCCCCE
Confidence 2 33455666666665552 3689999996 99998876 56554 5676 79999999
Q ss_pred EEEEecCCCcccccCCCCCeEEEEeCCCCeEE
Q 016446 288 IISYCKAEPEDQWMEGSAGSINVSSILTGKCL 319 (389)
Q Consensus 288 laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l 319 (389)
||+|+ |++|+|||+++|+..
T Consensus 415 lasg~------------d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 415 LASAM------------GYHILIWSQQEARTR 434 (435)
T ss_dssp EEEEC------------SSEEEECCCC-----
T ss_pred EEEEc------------CCcEEEEECCcCeee
Confidence 99975 479999999999864
No 95
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=312.09 Aligned_cols=288 Identities=11% Similarity=0.053 Sum_probs=225.0
Q ss_pred cccEEEEEee---ccEEEEEecCceEEEEecccceeeeeee------------cCCcceEEEEEEee-CCCEEEEEEEee
Q 016446 3 RTKVIEIVAA---RDIVFALAHSGVCAAFSRETNRRICFLN------------VSPDEVIRSLFYNK-NNDSLITVSVYA 66 (389)
Q Consensus 3 ~~~v~~i~~~---~~~~a~~~~~gtiklW~~~tg~~l~tl~------------~~~~~~v~sv~~sp-dg~~l~s~s~~~ 66 (389)
+..|..|.|+ +++||+++.||+|++|++.+++....+. ..|...|.+++|+| +++.|++ +
T Consensus 43 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s----~ 118 (408)
T 4a11_B 43 GGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTS----S 118 (408)
T ss_dssp SSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEE----E
T ss_pred CCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEE----E
Confidence 5689999997 6999999999999999999888877765 22458999999999 7778888 4
Q ss_pred cCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecC---CCeEEEEecCCCeEEEEeCCCCeEEEEec--C
Q 016446 67 SDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDV---NGKVLTYSAQDSIYKVFDLKNYTMLYSIS--D 141 (389)
Q Consensus 67 ~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~p---dG~~Las~s~D~tiklWdl~~g~~l~tl~--~ 141 (389)
+.| ..+++|++..++. +....+...+..++|+ | ++++|++++.|+.|++||+.+++++..+. .
T Consensus 119 ~~d------~~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 186 (408)
T 4a11_B 119 SFD------KTLKVWDTNTLQT-----ADVFNFEETVYSHHMS-PVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHR 186 (408)
T ss_dssp ETT------SEEEEEETTTTEE-----EEEEECSSCEEEEEEC-SSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCC
T ss_pred eCC------CeEEEeeCCCCcc-----ceeccCCCceeeeEee-cCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCC
Confidence 567 7899999988875 2222344456678887 5 55699999999999999999999888876 4
Q ss_pred CcEEEEEEcC-Cc-eEEEEecCCCCeeEEEEEcCCCe-EEEEE---------------eecCCceeEEEEEecCCCeEEE
Q 016446 142 KHVQEIKISP-GI-MLLIFNRSSSHVPLKILSIEDGT-VLKVF---------------YHLLHRNKKVDFIEQFNEKLLV 203 (389)
Q Consensus 142 ~~V~~vafS~-g~-~la~~~~~s~d~tiklWd~~tG~-~l~tl---------------~~~~~~~~~v~f~~~~~~~l~~ 203 (389)
..|.+++|+| +. +|+++ +.|++|++||+.+++ ++..+ ..|...+..++|+ |++..+++
T Consensus 187 ~~v~~~~~~~~~~~ll~~~---~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~ 262 (408)
T 4a11_B 187 QEILAVSWSPRYDYILATA---SADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT-SDGLHLLT 262 (408)
T ss_dssp SCEEEEEECSSCTTEEEEE---ETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC-TTSSEEEE
T ss_pred CcEEEEEECCCCCcEEEEE---cCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEc-CCCCEEEE
Confidence 6899999995 56 47666 345899999999877 66666 5688889999998 77889999
Q ss_pred EeCCCcEEEEECCCCeEEEEcccC------CCceEEEEEcCCCcEEEEEcCCeEEEEeCC-CcEEEEeccCcCCcCCCCe
Q 016446 204 KQENENLQILDVRNAELMEVSRTE------FMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNT 276 (389)
Q Consensus 204 ~s~D~tIklWd~~tg~~~~~l~gh------~~~v~sv~fspdg~~laS~sD~tIklWd~~-G~~l~tl~gh~~~~~~~~v 276 (389)
++.|++|++||+.+++....+.++ ......+...+.+.+++++.|++|++||+. ++++.++.+|... |
T Consensus 263 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~-----v 337 (408)
T 4a11_B 263 VGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKT-----V 337 (408)
T ss_dssp EETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSC-----E
T ss_pred ecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCe-----E
Confidence 999999999999999886655443 122223333445555555559999999996 9999999999877 8
Q ss_pred eEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCC
Q 016446 277 NNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATN 326 (389)
Q Consensus 277 ~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~ 326 (389)
.+++|+|||++||+++.| |+|+|||+.+++++.....+.
T Consensus 338 ~~~~~s~~~~~l~s~~~d-----------g~i~iw~~~~~~~~~~~~~~~ 376 (408)
T 4a11_B 338 DCCVFQSNFQELYSGSRD-----------CNILAWVPSLYEPVPDDDETT 376 (408)
T ss_dssp EEEEEETTTTEEEEEETT-----------SCEEEEEECC-----------
T ss_pred EEEEEcCCCCEEEEECCC-----------CeEEEEeCCCCCccCCCCceE
Confidence 999999999999999875 999999999999887766554
No 96
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.9e-41 Score=326.60 Aligned_cols=232 Identities=10% Similarity=0.074 Sum_probs=197.5
Q ss_pred cCceeEEEecCCCeEEEEecCCCeEEEEeCCCC--eEEEEec--CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCC
Q 016446 101 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY--TMLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDG 175 (389)
Q Consensus 101 ~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g--~~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG 175 (389)
+.+.+++|+ |||++||+|+.|++|+|||+.++ +++.++. ...|.+++|+ +|.+||+++ .|++|+|||+.++
T Consensus 12 ~~v~~~~~s-~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s---~d~~v~vwd~~~~ 87 (377)
T 3dwl_C 12 KPSYEHAFN-SQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS---QDRNAYVYEKRPD 87 (377)
T ss_dssp SCCSCCEEC-SSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEE---TTSSEEEC-----
T ss_pred CcEEEEEEC-CCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEe---CCCeEEEEEcCCC
Confidence 356789998 89999999999999999999988 6777775 4689999999 588898874 4589999999998
Q ss_pred e---EEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCe---EEEEccc-CCCceEEEEEcCCCcEEEEEc-
Q 016446 176 T---VLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAE---LMEVSRT-EFMTPSAFIFLYENQLFLTFR- 247 (389)
Q Consensus 176 ~---~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~---~~~~l~g-h~~~v~sv~fspdg~~laS~s- 247 (389)
+ ++.++..|...+..++|+ |++..+++++.|++|++||+++++ +.+.+.+ |...|.+++|+|++++|++++
T Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 88 GTWKQTLVLLRLNRAATFVRWS-PNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp -CCCCEEECCCCSSCEEEEECC-TTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred CceeeeeEecccCCceEEEEEC-CCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 8 778888899999999998 688899999999999999999988 4778888 999999999999999999998
Q ss_pred CCeEEEEeCC-------------------CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeE
Q 016446 248 NRTVAVWNFR-------------------GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSI 308 (389)
Q Consensus 248 D~tIklWd~~-------------------G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tI 308 (389)
|++|++||++ ++++.++ +|..+ |.+++|+|||++||+++.| ++|
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----v~~~~~sp~~~~l~~~~~d-----------~~i 229 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGW-----VHAVGFSPSGNALAYAGHD-----------SSV 229 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSS-----EEEEEECTTSSCEEEEETT-----------TEE
T ss_pred CCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCce-----EEEEEECCCCCEEEEEeCC-----------CcE
Confidence 9999999983 6788888 88876 8999999999999999865 999
Q ss_pred EEEeCCCCeE----EEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcE
Q 016446 309 NVSSILTGKC----LAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLV 384 (389)
Q Consensus 309 klWd~~tg~~----l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tI 384 (389)
+|||+.++++ +.++.+|. ..|.+++|+|||++|++|+.|+.+
T Consensus 230 ~iwd~~~~~~~~~~~~~~~~~~----------------------------------~~v~~~~~s~~~~~l~~~~~~~~~ 275 (377)
T 3dwl_C 230 TIAYPSAPEQPPRALITVKLSQ----------------------------------LPLRSLLWANESAIVAAGYNYSPI 275 (377)
T ss_dssp C-CEECSTTSCEEECCCEECSS----------------------------------SCEEEEEEEETTEEEEEESSSSEE
T ss_pred EEEECCCCCCcceeeEeecCCC----------------------------------CceEEEEEcCCCCEEEEEcCCcEE
Confidence 9999999998 88999998 589999999999999999988888
Q ss_pred EEcc
Q 016446 385 HVWS 388 (389)
Q Consensus 385 rlW~ 388 (389)
.+|.
T Consensus 276 ~~~~ 279 (377)
T 3dwl_C 276 LLQG 279 (377)
T ss_dssp EECC
T ss_pred EEEe
Confidence 5543
No 97
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-38 Score=313.85 Aligned_cols=280 Identities=9% Similarity=0.101 Sum_probs=227.5
Q ss_pred EEeeccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCC
Q 016446 9 IVAARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKP 88 (389)
Q Consensus 9 i~~~~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~ 88 (389)
+-++++.+++++.||+|++|+.++|++...+...|...|.+|+|+|+|+.|+++ +.| ..+++|++.+++.
T Consensus 99 ~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~----~~d------g~i~iwd~~~~~~ 168 (401)
T 4aez_A 99 LDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVG----LGN------GLVDIYDVESQTK 168 (401)
T ss_dssp EEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEE----ETT------SCEEEEETTTCCE
T ss_pred EeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEE----CCC------CeEEEEECcCCeE
Confidence 666677788999999999999999999999998777899999999999999994 466 7899999988875
Q ss_pred CCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCC-CCeEEEEec--CCcEEEEEEc-CCceEEEEecCCCC
Q 016446 89 DSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK-NYTMLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSH 164 (389)
Q Consensus 89 ~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~-~g~~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d 164 (389)
. . .+ ..+...+.+++|+ +++|++++.|++|++||+. .+.++..+. ...|.+++|+ ++.+|++++ .|
T Consensus 169 ~--~-~~-~~~~~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~d 238 (401)
T 4aez_A 169 L--R-TM-AGHQARVGCLSWN---RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGG---ND 238 (401)
T ss_dssp E--E-EE-CCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE---TT
T ss_pred E--E-Ee-cCCCCceEEEEEC---CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEe---CC
Confidence 1 1 11 2345556778885 5799999999999999998 455666664 5789999999 588888874 45
Q ss_pred eeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEE-Ee--CCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCc
Q 016446 165 VPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLV-KQ--ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ 241 (389)
Q Consensus 165 ~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~-~s--~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~ 241 (389)
++|++||+.+++++.++..|...+..++|+ |++..+++ ++ .|++|++||+.+++++..+. |...|.+++|+|+|+
T Consensus 239 ~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~-p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~ 316 (401)
T 4aez_A 239 NVVQIWDARSSIPKFTKTNHNAAVKAVAWC-PWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSK 316 (401)
T ss_dssp SCEEEEETTCSSEEEEECCCSSCCCEEEEC-TTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSS
T ss_pred CeEEEccCCCCCccEEecCCcceEEEEEEC-CCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCC
Confidence 899999999999999999999999999998 55555554 44 79999999999999999886 556899999999999
Q ss_pred EEEE--Ec-CCeEEEEeCC-CcEEE--EeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCC
Q 016446 242 LFLT--FR-NRTVAVWNFR-GELVT--SFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILT 315 (389)
Q Consensus 242 ~laS--~s-D~tIklWd~~-G~~l~--tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~t 315 (389)
+|++ |+ |++|++||+. +++.. .+.+|... |.+++|+|||++||+++.| |+|++||+.+
T Consensus 317 ~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~-----v~~~~~s~dg~~l~s~~~d-----------g~i~iw~~~~ 380 (401)
T 4aez_A 317 EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTR-----VLYSALSPDGRILSTAASD-----------ENLKFWRVYD 380 (401)
T ss_dssp EEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSC-----CCEEEECTTSSEEEEECTT-----------SEEEEEECCC
T ss_pred eEEEEeecCCCcEEEEecCCccceeEEEecCCCCC-----EEEEEECCCCCEEEEEeCC-----------CcEEEEECCC
Confidence 9999 55 9999999996 66544 47788876 7999999999999998764 9999999999
Q ss_pred CeEEEEecCCC
Q 016446 316 GKCLAKINATN 326 (389)
Q Consensus 316 g~~l~tl~gH~ 326 (389)
++++..+..+.
T Consensus 381 ~~~~~~~~~~~ 391 (401)
T 4aez_A 381 GDHVKRPIPIT 391 (401)
T ss_dssp -----------
T ss_pred Ccccccccccc
Confidence 99988765544
No 98
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=9.3e-38 Score=303.41 Aligned_cols=275 Identities=12% Similarity=0.110 Sum_probs=228.1
Q ss_pred ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcc
Q 016446 13 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 92 (389)
Q Consensus 13 ~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~ 92 (389)
+.++++++.|++|++||.++|+++..+.++ ..+.+++|+|+|+.|+.+ ++.| ..+++||+.+|++
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~---~~~d------~~i~v~d~~~~~~---- 66 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVG--SNPMGAVISPDGTKVYVA---NAHS------NDVSIIDTATNNV---- 66 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEE---EGGG------TEEEEEETTTTEE----
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecC--CCcceEEECCCCCEEEEE---CCCC------CeEEEEECCCCeE----
Confidence 356889999999999999999999999976 458999999999987442 4466 7899999988876
Q ss_pred eeEeeecccCceeEEEecCCCeEE-EEecCCCeEEEEeCCCCeEEEEec-CCcEEEEEEc-CCceEEEEecCCCCeeEEE
Q 016446 93 ALFESESLKWPGFVEFDDVNGKVL-TYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRSSSHVPLKI 169 (389)
Q Consensus 93 ~l~~~~~~~~~~~v~Fs~pdG~~L-as~s~D~tiklWdl~~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~s~d~tikl 169 (389)
+........+..++|+ |||++| ++++.|++|++||+.+++++..+. +..+.+++|+ +|+.|+.+. +.|++|++
T Consensus 67 -~~~~~~~~~v~~~~~s-pdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~--~~~~~v~~ 142 (391)
T 1l0q_A 67 -IATVPAGSSPQGVAVS-PDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTN--NGDKTVSV 142 (391)
T ss_dssp -EEEEECSSSEEEEEEC-TTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEE--TTTTEEEE
T ss_pred -EEEEECCCCccceEEC-CCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEe--CCCCEEEE
Confidence 2221222367789998 899977 566678999999999999988776 5689999999 577775443 45689999
Q ss_pred EEcCCCeEEEEEeecCCceeEEEEEecCCCeEE-EEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-
Q 016446 170 LSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLL-VKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR- 247 (389)
Q Consensus 170 Wd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~-~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s- 247 (389)
||+.+|+++.++..| ..+..++|+ |++..++ +++.|++|++||+++++++..+.. ...+..++|+|+|++|++++
T Consensus 143 ~d~~~~~~~~~~~~~-~~~~~~~~~-~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~ 219 (391)
T 1l0q_A 143 INTVTKAVINTVSVG-RSPKGIAVT-PDGTKVYVANFDSMSISVIDTVTNSVIDTVKV-EAAPSGIAVNPEGTKAYVTNV 219 (391)
T ss_dssp EETTTTEEEEEEECC-SSEEEEEEC-TTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSEEEEEEECTTSSEEEEEEE
T ss_pred EECCCCcEEEEEecC-CCcceEEEC-CCCCEEEEEeCCCCEEEEEECCCCeEEEEEec-CCCccceEECCCCCEEEEEec
Confidence 999999999999865 556899997 6777774 567899999999999999888764 45899999999999888774
Q ss_pred ---CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEE-EEEecCCCcccccCCCCCeEEEEeCCCCeEEEEe
Q 016446 248 ---NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLI-ISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 322 (389)
Q Consensus 248 ---D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~l-aS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl 322 (389)
|++|++||+. ++++.++..|.. +.+++|+|||++| ++++. |++|++||+.+|++++++
T Consensus 220 ~~~~~~v~~~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~s~~~-----------d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 220 DKYFNTVSMIDTGTNKITARIPVGPD------PAGIAVTPDGKKVYVALSF-----------XNTVSVIDTATNTITATM 282 (391)
T ss_dssp CSSCCEEEEEETTTTEEEEEEECCSS------EEEEEECTTSSEEEEEETT-----------TTEEEEEETTTTEEEEEE
T ss_pred CcCCCcEEEEECCCCeEEEEEecCCC------ccEEEEccCCCEEEEEcCC-----------CCEEEEEECCCCcEEEEE
Confidence 7899999997 999999988764 5899999999988 45443 599999999999999999
Q ss_pred cCCC
Q 016446 323 NATN 326 (389)
Q Consensus 323 ~gH~ 326 (389)
..|.
T Consensus 283 ~~~~ 286 (391)
T 1l0q_A 283 AVGK 286 (391)
T ss_dssp ECSS
T ss_pred ECCc
Confidence 9886
No 99
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.3e-38 Score=315.57 Aligned_cols=282 Identities=15% Similarity=0.258 Sum_probs=237.6
Q ss_pred EecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe-eecccCceeE
Q 016446 28 FSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFV 106 (389)
Q Consensus 28 W~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~~~~~~~v 106 (389)
|....-+....+.+|....+.+ ++++|+.|++ ++.| ..+++|++.+|++ +.. ..+.+.+.++
T Consensus 103 w~~~~~~~~~~l~~h~~~v~~~--~~~~g~~l~s----g~~d------g~i~vwd~~~~~~-----~~~~~~h~~~v~~~ 165 (445)
T 2ovr_B 103 WRRGELKSPKVLKGHDDHVITC--LQFCGNRIVS----GSDD------NTLKVWSAVTGKC-----LRTLVGHTGGVWSS 165 (445)
T ss_dssp HHHSCCCCCEEEECSTTSCEEE--EEEETTEEEE----EETT------SCEEEEETTTCCE-----EEECCCCSSCEEEE
T ss_pred ccCCCcceeEEecccCCCcEEE--EEEcCCEEEE----EECC------CcEEEEECCCCcE-----EEEEcCCCCCEEEE
Confidence 4443344567888886444554 5667999999 4577 8899999998886 222 2355667789
Q ss_pred EEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEcCCceEEEEecCCCCeeEEEEEcCCCeEEEEEeec
Q 016446 107 EFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHL 184 (389)
Q Consensus 107 ~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~ 184 (389)
+|+ +.+|++|+.|++|++||+.+++++.++. ...|.+++|++ ..+++++ .|++|++||+.+|+++.++.+|
T Consensus 166 ~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~l~s~s---~dg~i~~wd~~~~~~~~~~~~~ 238 (445)
T 2ovr_B 166 QMR---DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE-KRVVSGS---RDATLRVWDIETGQCLHVLMGH 238 (445)
T ss_dssp EEE---TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET-TEEEEEE---TTSEEEEEESSSCCEEEEEECC
T ss_pred Eec---CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC-CEEEEEe---CCCEEEEEECCCCcEEEEEcCC
Confidence 996 5699999999999999999999998886 46899999974 4576764 4589999999999999999999
Q ss_pred CCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEE
Q 016446 185 LHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVT 262 (389)
Q Consensus 185 ~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~ 262 (389)
...+..++| ++..+++++.|++|++||+++++++.++.+|...|.+++| ++++|++++ |++|++||++ ++++.
T Consensus 239 ~~~v~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~ 313 (445)
T 2ovr_B 239 VAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIH 313 (445)
T ss_dssp SSCEEEEEE---CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred cccEEEEEE---CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEE
Confidence 999999988 5789999999999999999999999999999999999999 899999998 9999999996 99999
Q ss_pred EeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCC
Q 016446 263 SFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGK 342 (389)
Q Consensus 263 tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~ 342 (389)
++.+|... +.++.+ ++++|++|+.| |+|++||+.+++++.++.+|..
T Consensus 314 ~~~~~~~~-----v~~~~~--~~~~l~~~~~d-----------g~i~vwd~~~~~~~~~~~~~~~--------------- 360 (445)
T 2ovr_B 314 TLTGHQSL-----TSGMEL--KDNILVSGNAD-----------STVKIWDIKTGQCLQTLQGPNK--------------- 360 (445)
T ss_dssp EECCCCSC-----EEEEEE--ETTEEEEEETT-----------SCEEEEETTTCCEEEEECSTTS---------------
T ss_pred EEcCCccc-----EEEEEE--eCCEEEEEeCC-----------CeEEEEECCCCcEEEEEccCCC---------------
Confidence 99999876 566655 78899999865 9999999999999999998431
Q ss_pred ccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 343 SKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
+...|.+++|+ ++.|++|+.||+|++||.
T Consensus 361 ----------------~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~ 389 (445)
T 2ovr_B 361 ----------------HQSAVTCLQFN--KNFVITSSDDGTVKLWDL 389 (445)
T ss_dssp ----------------CSSCEEEEEEC--SSEEEEEETTSEEEEEET
T ss_pred ----------------CCCCEEEEEEC--CCEEEEEeCCCeEEEEEC
Confidence 11589999996 589999999999999983
No 100
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.9e-39 Score=321.31 Aligned_cols=264 Identities=14% Similarity=0.285 Sum_probs=228.1
Q ss_pred cceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCC
Q 016446 44 DEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDS 123 (389)
Q Consensus 44 ~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~ 123 (389)
...|.++.| +|+.|++ ++.| ..+++||+.+++.. ..+ ..+...+.+++| ++++|++|+.|+
T Consensus 133 ~~~v~~~~~--d~~~l~~----g~~d------g~i~iwd~~~~~~~---~~~-~~h~~~v~~l~~---~~~~l~sg~~dg 193 (435)
T 1p22_A 133 SKGVYCLQY--DDQKIVS----GLRD------NTIKIWDKNTLECK---RIL-TGHTGSVLCLQY---DERVIITGSSDS 193 (435)
T ss_dssp CCCEEEEEC--CSSEEEE----EESS------SCEEEEESSSCCEE---EEE-CCCSSCEEEEEC---CSSEEEEEETTS
T ss_pred CCcEEEEEE--CCCEEEE----EeCC------CeEEEEeCCCCeEE---EEE-cCCCCcEEEEEE---CCCEEEEEcCCC
Confidence 357888776 8999999 4577 88999999888762 112 234445566666 688999999999
Q ss_pred eEEEEeCCCCeEEEEec--CCcEEEEEEcCCceEEEEecCCCCeeEEEEEcCCCeEE---EEEeecCCceeEEEEEecCC
Q 016446 124 IYKVFDLKNYTMLYSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVL---KVFYHLLHRNKKVDFIEQFN 198 (389)
Q Consensus 124 tiklWdl~~g~~l~tl~--~~~V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~l---~tl~~~~~~~~~v~f~~~~~ 198 (389)
+|++||+.+++++.++. ...|.+++|+++ ++++++ .|++|++||+.+++++ ..+.+|...+..++| ++
T Consensus 194 ~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~-~l~s~s---~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~ 266 (435)
T 1p22_A 194 TVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG-MMVTCS---KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DD 266 (435)
T ss_dssp CEEEEESSSCCEEEEECCCCSCEEEEECCTT-EEEEEE---TTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE---ET
T ss_pred eEEEEECCCCcEEEEEcCCCCcEEEEEEcCC-EEEEee---CCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe---CC
Confidence 99999999999998886 468999999865 676764 4589999999998866 778889899999998 47
Q ss_pred CeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCe
Q 016446 199 EKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNT 276 (389)
Q Consensus 199 ~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v 276 (389)
..+++++.|++|++||+++++++.++.+|...|.+++| ++++|++++ |++|++||++ |+++.++.+|... |
T Consensus 267 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~-----v 339 (435)
T 1p22_A 267 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-----V 339 (435)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSC-----E
T ss_pred CEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCc-----E
Confidence 89999999999999999999999999999999999998 578999998 9999999997 9999999999887 7
Q ss_pred eEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCe---------EEEEecCCCCCCCcccccCCCCCCCccccc
Q 016446 277 NNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK---------CLAKINATNCSPKVDDELGSSSTGKSKKLN 347 (389)
Q Consensus 277 ~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~---------~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~ 347 (389)
.+++| ||++|++|+.| |+|++||+.+++ ++.++.+|.
T Consensus 340 ~~~~~--~~~~l~sg~~d-----------g~i~vwd~~~~~~~~~~~~~~~~~~~~~h~--------------------- 385 (435)
T 1p22_A 340 RCIRF--DNKRIVSGAYD-----------GKIKVWDLVAALDPRAPAGTLCLRTLVEHS--------------------- 385 (435)
T ss_dssp EEEEC--CSSEEEEEETT-----------SCEEEEEHHHHTSTTSCTTTTEEEEECCCS---------------------
T ss_pred EEEEe--cCCEEEEEeCC-----------CcEEEEECCCCCCccccccchheeeccCCC---------------------
Confidence 89998 89999999875 999999998887 999999998
Q ss_pred cccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 348 KSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 348 ~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
..|++++| ||+.|+||+.||+|++||.
T Consensus 386 -------------~~v~~l~~--~~~~l~s~s~Dg~i~iwd~ 412 (435)
T 1p22_A 386 -------------GRVFRLQF--DEFQIVSSSHDDTILIWDF 412 (435)
T ss_dssp -------------SCCCCEEE--CSSCEEECCSSSEEEEEC-
T ss_pred -------------CCeEEEEe--CCCEEEEEeCCCEEEEEEC
Confidence 58999999 8899999999999999983
No 101
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=6e-39 Score=319.94 Aligned_cols=275 Identities=11% Similarity=0.139 Sum_probs=228.1
Q ss_pred ccEEEEEeeccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEe
Q 016446 4 TKVIEIVAARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYI 83 (389)
Q Consensus 4 ~~v~~i~~~~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i 83 (389)
..|..+.|.+++||+++.||+|++||..+++++.++.+|. ..|.+++| +++.|++ ++.| ..+++|++
T Consensus 134 ~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~--~~~~l~s----g~~d------g~i~vwd~ 200 (435)
T 1p22_A 134 KGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHT-GSVLCLQY--DERVIIT----GSSD------STVRVWDV 200 (435)
T ss_dssp CCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCS-SCEEEEEC--CSSEEEE----EETT------SCEEEEES
T ss_pred CcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCC-CcEEEEEE--CCCEEEE----EcCC------CeEEEEEC
Confidence 4588888889999999999999999999999999999875 89999999 8899999 4577 88999999
Q ss_pred ccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEE---EEec--CCcEEEEEEcCCceEEEE
Q 016446 84 RRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML---YSIS--DKHVQEIKISPGIMLLIF 158 (389)
Q Consensus 84 ~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l---~tl~--~~~V~~vafS~g~~la~~ 158 (389)
.+|+.. ..+ ..+...+.+++|+ +.+|++|+.|++|++||+.+++++ ..+. ...|.+++| ++++|+++
T Consensus 201 ~~~~~~--~~~--~~h~~~v~~l~~~---~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~s~ 272 (435)
T 1p22_A 201 NTGEML--NTL--IHHCEAVLHLRFN---NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSA 272 (435)
T ss_dssp SSCCEE--EEE--CCCCSCEEEEECC---TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE-ETTEEEEE
T ss_pred CCCcEE--EEE--cCCCCcEEEEEEc---CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe-CCCEEEEE
Confidence 998862 111 2344556778886 359999999999999999888754 4443 468999999 77788877
Q ss_pred ecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcC
Q 016446 159 NRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLY 238 (389)
Q Consensus 159 ~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fsp 238 (389)
+ .|++|++||+.++++++++.+|...+..++|. +..+++++.|++|++||+++++++.++.+|...|.+++|
T Consensus 273 ~---~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~-- 344 (435)
T 1p22_A 273 S---GDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-- 344 (435)
T ss_dssp E---TTSEEEEEETTTCCEEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--
T ss_pred e---CCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--
Confidence 4 45899999999999999999999999988884 789999999999999999999999999999999999999
Q ss_pred CCcEEEEEc-CCeEEEEeCC-Cc---------EEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCe
Q 016446 239 ENQLFLTFR-NRTVAVWNFR-GE---------LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGS 307 (389)
Q Consensus 239 dg~~laS~s-D~tIklWd~~-G~---------~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~t 307 (389)
++++|++++ ||+|++||+. ++ ++.++.+|..+ |.+++| ||++|++|+. ||+
T Consensus 345 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~l~~--~~~~l~s~s~-----------Dg~ 406 (435)
T 1p22_A 345 DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGR-----VFRLQF--DEFQIVSSSH-----------DDT 406 (435)
T ss_dssp CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSC-----CCCEEE--CSSCEEECCS-----------SSE
T ss_pred cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCC-----eEEEEe--CCCEEEEEeC-----------CCE
Confidence 889999998 9999999985 65 89999999987 789999 8999999875 599
Q ss_pred EEEEeCCCCeEEEEecCC
Q 016446 308 INVSSILTGKCLAKINAT 325 (389)
Q Consensus 308 IklWd~~tg~~l~tl~gH 325 (389)
|+|||+.++........+
T Consensus 407 i~iwd~~~~~~~~~~~~~ 424 (435)
T 1p22_A 407 ILIWDFLNDPAAQAEPPR 424 (435)
T ss_dssp EEEEC-------------
T ss_pred EEEEECCCCCCcccCCCC
Confidence 999999987776555443
No 102
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-38 Score=315.83 Aligned_cols=279 Identities=11% Similarity=0.094 Sum_probs=222.4
Q ss_pred cccEEEEEee---ccEEEEEecCceEEEEeccc---ceeee-eeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceee
Q 016446 3 RTKVIEIVAA---RDIVFALAHSGVCAAFSRET---NRRIC-FLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKC 75 (389)
Q Consensus 3 ~~~v~~i~~~---~~~~a~~~~~gtiklW~~~t---g~~l~-tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~ 75 (389)
...|..|.|+ +++||+++.||+|++|++.+ +++.. .+...|...|.+|+|+|+++.|++ ++.|
T Consensus 63 ~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s----~s~d------ 132 (437)
T 3gre_A 63 PNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAV----SSKD------ 132 (437)
T ss_dssp TSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEE----EETT------
T ss_pred CCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEE----EeCC------
Confidence 4679999998 57999999999999999987 55332 333235689999999999999999 4577
Q ss_pred eeeeEeEec---cCCCCCcce---eEeee-----cccCceeEE--EecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--
Q 016446 76 RSTKIEYIR---RGKPDSGFA---LFESE-----SLKWPGFVE--FDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-- 140 (389)
Q Consensus 76 ~~~~l~~i~---~g~~~~~~~---l~~~~-----~~~~~~~v~--Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~-- 140 (389)
..+++|++. .|+...... +.... ....+..++ |+ |++++|++++.|++|++||+.+++++.++.
T Consensus 133 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 211 (437)
T 3gre_A 133 GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVN-EEKSLLVALTNLSRVIIFDIRTLERLQIIENS 211 (437)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEEC-SSCEEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEc-CCCCEEEEEeCCCeEEEEeCCCCeeeEEEccC
Confidence 789999984 666521111 10000 112223344 54 789999999999999999999999998885
Q ss_pred --CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEe-ecCCceeEEEEEe---cCCCeEEEEeCCCcEEEE
Q 016446 141 --DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFY-HLLHRNKKVDFIE---QFNEKLLVKQENENLQIL 213 (389)
Q Consensus 141 --~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~-~~~~~~~~v~f~~---~~~~~l~~~s~D~tIklW 213 (389)
...|.+++|+ ++.+|++++ .|++|++||++++++++++. .|...+..++|.+ +++..+++++.|++|+||
T Consensus 212 ~h~~~v~~~~~s~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iw 288 (437)
T 3gre_A 212 PRHGAVSSICIDEECCVLILGT---TRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIW 288 (437)
T ss_dssp GGGCCEEEEEECTTSCEEEEEE---TTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEc---CCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEE
Confidence 3689999999 588888774 45899999999999999997 6777889997763 345578888999999999
Q ss_pred ECCCCeEEEEcccC--------------------------CCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEec
Q 016446 214 DVRNAELMEVSRTE--------------------------FMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFE 265 (389)
Q Consensus 214 d~~tg~~~~~l~gh--------------------------~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~ 265 (389)
|++++++++++.+| ...|++++|+ ++++|++++ |++|++||+. +++++++.
T Consensus 289 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 289 NFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp ETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEE
T ss_pred EcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEe
Confidence 99999999888754 4557788888 779999999 9999999996 99988888
Q ss_pred c-------------------------------------CcCCcCCCCeeEEEECCC--CCEEEEEecCCCcccccCCCCC
Q 016446 266 D-------------------------------------HLLWHPDCNTNNIYITSD--QDLIISYCKAEPEDQWMEGSAG 306 (389)
Q Consensus 266 g-------------------------------------h~~~~~~~~v~sv~fSpd--G~~laS~s~D~~~~~~~~s~D~ 306 (389)
+ |... |++++|+|+ +.+|+||+.| |
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----I~~i~~~~~~~~~~l~s~~~d-----------G 431 (437)
T 3gre_A 368 SPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDI-----INSISTCEVDETPLLVACDNS-----------G 431 (437)
T ss_dssp CC--CCCEEEEEEEETTEEEEEEECC-------------CCC-----EEEEEEEESSSSEEEEEEETT-----------S
T ss_pred cccccCceEEEEEeecceEEEEEecccccccccCcccccccc-----eeeEeeeccCCceEEEEEcCC-----------c
Confidence 7 4443 899999998 8899999765 9
Q ss_pred eEEEEe
Q 016446 307 SINVSS 312 (389)
Q Consensus 307 tIklWd 312 (389)
+||||+
T Consensus 432 ~I~iw~ 437 (437)
T 3gre_A 432 LIGIFQ 437 (437)
T ss_dssp CEEEEC
T ss_pred eEEEeC
Confidence 999995
No 103
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-38 Score=304.15 Aligned_cols=236 Identities=14% Similarity=0.212 Sum_probs=204.3
Q ss_pred ecccCceeEEEecCCCeEEEEecCCCeEEEEeCC--CCeEEEEec--CCcEEEEEEc-C--CceEEEEecCCCCeeEEEE
Q 016446 98 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK--NYTMLYSIS--DKHVQEIKIS-P--GIMLLIFNRSSSHVPLKIL 170 (389)
Q Consensus 98 ~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~--~g~~l~tl~--~~~V~~vafS-~--g~~la~~~~~s~d~tiklW 170 (389)
.|...+.+++|+ |||++||+|+.|++|+|||+. +++++.++. ...|.+++|+ | +.+|++++ .|++|++|
T Consensus 9 ~h~~~v~~~~~s-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~---~dg~v~iw 84 (379)
T 3jrp_A 9 AHNELIHDAVLD-YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS---YDGKVLIW 84 (379)
T ss_dssp ECCCCEEEEEEC-SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE---TTSCEEEE
T ss_pred CCcccEEEEEEc-CCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEec---cCCEEEEE
Confidence 455667889998 899999999999999999998 556777775 4689999998 5 78998874 45899999
Q ss_pred EcCCCe--EEEEEeecCCceeEEEEEecC--CCeEEEEeCCCcEEEEECCCCe--EEEEcccCCCceEEEEEcC------
Q 016446 171 SIEDGT--VLKVFYHLLHRNKKVDFIEQF--NEKLLVKQENENLQILDVRNAE--LMEVSRTEFMTPSAFIFLY------ 238 (389)
Q Consensus 171 d~~tG~--~l~tl~~~~~~~~~v~f~~~~--~~~l~~~s~D~tIklWd~~tg~--~~~~l~gh~~~v~sv~fsp------ 238 (389)
|+.+++ ++..+..|...+..++|+ |+ +..+++++.|++|++||+.+++ ....+.+|...|.+++|+|
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVHSASVNSVQWA-PHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 163 (379)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEEC-CGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----
T ss_pred EcCCCceeEeeeecCCCcceEEEEeC-CCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccc
Confidence 999998 888888899999999998 56 7889999999999999999884 4556789999999999999
Q ss_pred -------CCcEEEEEc-CCeEEEEeCC-Cc----EEEEeccCcCCcCCCCeeEEEECCC---CCEEEEEecCCCcccccC
Q 016446 239 -------ENQLFLTFR-NRTVAVWNFR-GE----LVTSFEDHLLWHPDCNTNNIYITSD---QDLIISYCKAEPEDQWME 302 (389)
Q Consensus 239 -------dg~~laS~s-D~tIklWd~~-G~----~l~tl~gh~~~~~~~~v~sv~fSpd---G~~laS~s~D~~~~~~~~ 302 (389)
++++|++++ |++|++||+. ++ ++.++.+|..+ |.+++|+|| |++||+++.|
T Consensus 164 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~-----v~~~~~sp~~~~~~~l~s~~~d-------- 230 (379)
T 3jrp_A 164 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW-----VRDVAWSPTVLLRSYLASVSQD-------- 230 (379)
T ss_dssp ------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC-----EEEEEECCCCSSSEEEEEEETT--------
T ss_pred ccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCc-----EeEEEECCCCCCCCeEEEEeCC--------
Confidence 799999998 9999999985 43 66789999887 899999999 9999999875
Q ss_pred CCCCeEEEEeCCCCe---EEEEecC--CCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEE
Q 016446 303 GSAGSINVSSILTGK---CLAKINA--TNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYT 377 (389)
Q Consensus 303 s~D~tIklWd~~tg~---~l~tl~g--H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaS 377 (389)
|+|+|||+.+++ ....+.. |. ..|++++|+|||+.||+
T Consensus 231 ---g~i~iwd~~~~~~~~~~~~~~~~~~~----------------------------------~~v~~~~~s~~g~~l~~ 273 (379)
T 3jrp_A 231 ---RTCIIWTQDNEQGPWKKTLLKEEKFP----------------------------------DVLWRASWSLSGNVLAL 273 (379)
T ss_dssp ---SCEEEEEESSTTSCCEEEESSSSCCS----------------------------------SCEEEEEECSSSCCEEE
T ss_pred ---CEEEEEeCCCCCccceeeeeccccCC----------------------------------CcEEEEEEcCCCCEEEE
Confidence 999999999874 2222222 43 58999999999999999
Q ss_pred ecCCCcEEEcc
Q 016446 378 GNRHGLVHVWS 388 (389)
Q Consensus 378 gs~D~tIrlW~ 388 (389)
++.||+|++|+
T Consensus 274 ~~~dg~i~iw~ 284 (379)
T 3jrp_A 274 SGGDNKVTLWK 284 (379)
T ss_dssp EESSSSEEEEE
T ss_pred ecCCCcEEEEe
Confidence 99999999997
No 104
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=6.8e-38 Score=308.41 Aligned_cols=311 Identities=11% Similarity=0.083 Sum_probs=245.1
Q ss_pred EecCceEEEEecc--cc--eeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCccee
Q 016446 19 LAHSGVCAAFSRE--TN--RRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFAL 94 (389)
Q Consensus 19 ~~~~gtiklW~~~--tg--~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l 94 (389)
+++++.++||.++ ++ +.+..+..+ ..+.+++|+|++..+++ ++.+ ..+++||+.+|+.......
T Consensus 95 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~~~~----~~~~------~~i~~~d~~~g~~~~~~~~ 162 (433)
T 3bws_A 95 KPEELNEKLIALDKEGITHRFISRFKTG--FQPKSVRFIDNTRLAIP----LLED------EGMDVLDINSGQTVRLSPP 162 (433)
T ss_dssp SGGGGTTCEEECCBTTCSEEEEEEEECS--SCBCCCEESSSSEEEEE----BTTS------SSEEEEETTTCCEEEECCC
T ss_pred ccCCCceEEEEECCCCCcceEEEEEcCC--CCceEEEEeCCCeEEEE----eCCC------CeEEEEECCCCeEeeecCc
Confidence 4555645665543 35 777777764 45669999996666665 5566 7899999998886211000
Q ss_pred Ee-eecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceEEEEecCCCCeeEEEE
Q 016446 95 FE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVPLKIL 170 (389)
Q Consensus 95 ~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d~tiklW 170 (389)
-. ..+.+.+..++|+ |+|+++++++.|++|++||+.+++++.++. ...+.+++|+ +|.++++++ +.|++|++|
T Consensus 163 ~~~~~~~~~v~~~~~~-~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~i~~~ 239 (433)
T 3bws_A 163 EKYKKKLGFVETISIP-EHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSN--WISEDISVI 239 (433)
T ss_dssp HHHHTTCCEEEEEEEG-GGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEE--TTTTEEEEE
T ss_pred ccccccCCceeEEEEc-CCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEe--cCCCcEEEE
Confidence 00 1234456679996 899999999999999999999999888875 5689999999 577776553 346899999
Q ss_pred EcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEe--------CCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCc-
Q 016446 171 SIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ--------ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ- 241 (389)
Q Consensus 171 d~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s--------~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~- 241 (389)
|+.+|+++.++..+ ..+..++|+ |++..+++++ .|++|++||+.+++++..+ .|...+..++|+|+|+
T Consensus 240 d~~~~~~~~~~~~~-~~~~~~~~~-~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~ 316 (433)
T 3bws_A 240 DRKTKLEIRKTDKI-GLPRGLLLS-KDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENK 316 (433)
T ss_dssp ETTTTEEEEECCCC-SEEEEEEEC-TTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTE
T ss_pred ECCCCcEEEEecCC-CCceEEEEc-CCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCE
Confidence 99999999998865 568899998 7788888877 4899999999999988775 4666899999999996
Q ss_pred EEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCc----ccccCCCCCeEEEEeCCC
Q 016446 242 LFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPE----DQWMEGSAGSINVSSILT 315 (389)
Q Consensus 242 ~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~----~~~~~s~D~tIklWd~~t 315 (389)
++++++ |++|++||++ ++++..+. |... +.+++|+|||++|++++.+... --.+++.||+|++||+.+
T Consensus 317 l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~-----~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 317 IYVSDMCCSKIEVYDLKEKKVQKSIP-VFDK-----PNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEE-CSSS-----EEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred EEEEecCCCEEEEEECCCCcEEEEec-CCCC-----CCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 556667 9999999997 88888886 4433 7899999999999998865210 014455689999999999
Q ss_pred CeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecC-CCcEEEcc
Q 016446 316 GKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNR-HGLVHVWS 388 (389)
Q Consensus 316 g~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~-D~tIrlW~ 388 (389)
++++..+.++. .+.+++|+|||+.|++++. |++|++|+
T Consensus 391 ~~~~~~~~~~~-----------------------------------~~~~~~~s~dg~~l~~~~~~d~~i~v~~ 429 (433)
T 3bws_A 391 DTVKEFWEAGN-----------------------------------QPTGLDVSPDNRYLVISDFLDHQIRVYR 429 (433)
T ss_dssp TEEEEEEECSS-----------------------------------SEEEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred CcEEEEecCCC-----------------------------------CCceEEEcCCCCEEEEEECCCCeEEEEE
Confidence 99999998754 7899999999999998775 99999997
No 105
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.3e-38 Score=294.28 Aligned_cols=256 Identities=13% Similarity=0.164 Sum_probs=210.8
Q ss_pred eecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe-eecccCceeEEEecC--CCeE
Q 016446 39 LNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFVEFDDV--NGKV 115 (389)
Q Consensus 39 l~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~p--dG~~ 115 (389)
+.+| .+.|.+++|+|+|+.||++ +.| ..+++|++..+.... ..+.. ..+...+.+++|+ | ||++
T Consensus 7 ~~gH-~~~v~~~~~~~~~~~l~~~----~~d------g~i~iw~~~~~~~~~-~~~~~~~~~~~~v~~~~~~-~~~d~~~ 73 (351)
T 3f3f_A 7 DSGH-DDLVHDVVYDFYGRHVATC----SSD------QHIKVFKLDKDTSNW-ELSDSWRAHDSSIVAIDWA-SPEYGRI 73 (351)
T ss_dssp ECCC-SSCEEEEEECSSSSEEEEE----ETT------SEEEEEEECSSSCCE-EEEEEEECCSSCEEEEEEC-CGGGCSE
T ss_pred Cccc-ccceeEEEEcCCCCEEEEe----eCC------CeEEEEECCCCCCcc-eecceeccCCCcEEEEEEc-CCCCCCE
Confidence 4555 5999999999999999994 577 899999998765311 11111 2455667889998 6 6999
Q ss_pred EEEecCCCeEEEEeCCCC---------eEEEEec--CCcEEEEEEcC---CceEEEEecCCCCeeEEEEEcCCCeEEEEE
Q 016446 116 LTYSAQDSIYKVFDLKNY---------TMLYSIS--DKHVQEIKISP---GIMLLIFNRSSSHVPLKILSIEDGTVLKVF 181 (389)
Q Consensus 116 Las~s~D~tiklWdl~~g---------~~l~tl~--~~~V~~vafS~---g~~la~~~~~s~d~tiklWd~~tG~~l~tl 181 (389)
|++++.|++|++||+.++ +++.++. ...|.+++|+| +.+|++++ .|++|++||+.++++++++
T Consensus 74 l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~---~dg~v~iwd~~~~~~~~~~ 150 (351)
T 3f3f_A 74 IASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLG---NDGILRLYDALEPSDLRSW 150 (351)
T ss_dssp EEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE---TTCEEEEEECSSTTCTTCC
T ss_pred EEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEec---CCCcEEEecCCChHHhccc
Confidence 999999999999999887 5666765 56899999994 77888774 4589999999999877665
Q ss_pred e-------------ecCCceeEEEEEec--CCCeEEEEeCCCcEEEEECCCCeE--EEEcccCCCceEEEEEcCCC----
Q 016446 182 Y-------------HLLHRNKKVDFIEQ--FNEKLLVKQENENLQILDVRNAEL--MEVSRTEFMTPSAFIFLYEN---- 240 (389)
Q Consensus 182 ~-------------~~~~~~~~v~f~~~--~~~~l~~~s~D~tIklWd~~tg~~--~~~l~gh~~~v~sv~fspdg---- 240 (389)
. .|...+..++|++. .+..+++++.|+.+.+|+...++. +..+.+|...|.+++|+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~ 230 (351)
T 3f3f_A 151 TLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWY 230 (351)
T ss_dssp EEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSS
T ss_pred cccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcc
Confidence 4 57778899999832 378899999999999999988875 78899999999999999999
Q ss_pred cEEEEEc-CCeEEEEeCC-C----------------------------------------------cEEEEeccCcCCcC
Q 016446 241 QLFLTFR-NRTVAVWNFR-G----------------------------------------------ELVTSFEDHLLWHP 272 (389)
Q Consensus 241 ~~laS~s-D~tIklWd~~-G----------------------------------------------~~l~tl~gh~~~~~ 272 (389)
++|++++ |++|++||+. + +++.++.+|...
T Consensus 231 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-- 308 (351)
T 3f3f_A 231 QLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGE-- 308 (351)
T ss_dssp EEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSC--
T ss_pred eEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEeccccc--
Confidence 8999999 9999999986 5 788899999887
Q ss_pred CCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCe---EEEEecCCC
Q 016446 273 DCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK---CLAKINATN 326 (389)
Q Consensus 273 ~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~---~l~tl~gH~ 326 (389)
|.+++|+|||++||+++.| |+|+|||+.+++ |+..+..|+
T Consensus 309 ---v~~~~~s~~~~~l~s~~~d-----------g~v~iw~~~~~~~~~~~~~~~~~~ 351 (351)
T 3f3f_A 309 ---VWSVSWNLTGTILSSAGDD-----------GKVRLWKATYSNEFKCMSVITAQQ 351 (351)
T ss_dssp ---EEEEEECSSSCCEEEEETT-----------SCEEEEEECTTSCEEEEEEEC---
T ss_pred ---EEEEEEcCCCCEEEEecCC-----------CcEEEEecCcCcchhheeehcccC
Confidence 8999999999999999875 999999999885 566666553
No 106
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-39 Score=341.03 Aligned_cols=254 Identities=9% Similarity=0.040 Sum_probs=206.7
Q ss_pred cceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCC
Q 016446 44 DEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDS 123 (389)
Q Consensus 44 ~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~ 123 (389)
..+|.+|+|||||++||| ++.| .+++ +...++. + ..|...++.|+|+ ||| .|+
T Consensus 15 ~~~v~sv~~SpDG~~iAS----as~D------~TV~--d~~~~~~-----l--~gh~~~v~~V~Fs-Pdg-------~~~ 67 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLT----TFPD------ISIG--QPKYAKD-----I--NCNSKNLFHVKEF-PLE-------FEN 67 (588)
T ss_dssp SSSSCCEEECTTSCEEEE----CSSS------EEEE--EECCCSC-----C--SSBGGGTEEEEEE-CCC-------CCC
T ss_pred hccEEEEEECCCCCEEEE----EcCC------ceee--cccccce-----e--cCCCccEEEEEEC-CCC-------Ccc
Confidence 368999999999999999 5688 6766 5455543 2 2455667889998 899 577
Q ss_pred eEEEEeCCCCeEEEEec-CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCC-----ceeEEEEEec
Q 016446 124 IYKVFDLKNYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLH-----RNKKVDFIEQ 196 (389)
Q Consensus 124 tiklWdl~~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~-----~~~~v~f~~~ 196 (389)
++++|+. ++..+.++. ...|.+|+|| +|++||+++ .|++|+|||.++ ++.++. |.. .+.+|+|+ |
T Consensus 68 ~~~~~~~-~~~~~~~~~~~~~V~~vawSPdG~~LAs~s---~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafS-P 139 (588)
T 2j04_A 68 KLDFELA-QQNGLLNSQPVCYPRVCKPSPIDDWMAVLS---NNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWN-P 139 (588)
T ss_dssp TTTTSCC-CSSCSSTTSCSCCEEEEEECSSSSCEEEEE---TTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEEC-S
T ss_pred eEEEEeC-CCceEeecCCCCcEEEEEECCCCCEEEEEe---CCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEc-C
Confidence 7777775 333344433 5789999999 599999874 458999999644 888888 655 49999998 8
Q ss_pred CCCeEEEEeCCCcEEEEECCCCe-------EEEEc----ccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcE---
Q 016446 197 FNEKLLVKQENENLQILDVRNAE-------LMEVS----RTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GEL--- 260 (389)
Q Consensus 197 ~~~~l~~~s~D~tIklWd~~tg~-------~~~~l----~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~--- 260 (389)
+++.|++++.||+|||||+++++ .++++ .||..+|.+|+|+||| +|+++ |++||+||++ +++
T Consensus 140 DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~ 217 (588)
T 2j04_A 140 IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPV 217 (588)
T ss_dssp SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCC
T ss_pred CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccc
Confidence 99999999999999999999986 36776 7888999999999999 55555 9999999997 452
Q ss_pred EEEec-cCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCC
Q 016446 261 VTSFE-DHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSS 339 (389)
Q Consensus 261 l~tl~-gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~ 339 (389)
.++|+ +|... |++|+|| |++|||++ |++|||||+.+++......||+
T Consensus 218 ~~tL~~~h~~~-----V~svaFs--g~~LASa~------------~~tIkLWd~~~~~~~~~~~gh~------------- 265 (588)
T 2j04_A 218 SRMIQNASRRK-----ITDLKIV--DYKVVLTC------------PGYVHKIDLKNYSISSLKTGSL------------- 265 (588)
T ss_dssp EEEEECCCSSC-----CCCEEEE--TTEEEEEC------------SSEEEEEETTTTEEEEEECSCC-------------
T ss_pred eeeecccccCc-----EEEEEEE--CCEEEEEe------------CCeEEEEECCCCeEEEEEcCCC-------------
Confidence 46784 77765 8999999 79999986 3899999999888755555898
Q ss_pred CCCccccccccceecccccccCCEEEEEE--CCCCCEEEEecCCCcEEEcc
Q 016446 340 TGKSKKLNKSSYIRSTVGEALEDITSLFY--DEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~V~svaf--Spdg~~LaSgs~D~tIrlW~ 388 (389)
..|++++| ||||+.|+++++||+ |||.
T Consensus 266 ---------------------~~V~~va~~~s~d~~~La~a~edG~-klw~ 294 (588)
T 2j04_A 266 ---------------------ENFHIIPLNHEKESTILLMSNKTSY-KVLL 294 (588)
T ss_dssp ---------------------SCCCEEEETTCSSCEEEEECSSCEE-EEEE
T ss_pred ---------------------ceEEEEEeeeCCCCCEEEEEcCCCC-EEEe
Confidence 58999999 999999999999999 9996
No 107
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=5.1e-39 Score=316.50 Aligned_cols=254 Identities=11% Similarity=0.157 Sum_probs=198.7
Q ss_pred cccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCe-----------EEEEecC--------------CcEEEEEEcC-C
Q 016446 99 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-----------MLYSISD--------------KHVQEIKISP-G 152 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~-----------~l~tl~~--------------~~V~~vafS~-g 152 (389)
....|.+|+|+ |||++||+|+.|++|+|||+.+++ ++.++.+ ..|.+|+|+| +
T Consensus 27 ~~~~V~~v~~s-~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 27 EADIISTVEFN-HSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GGGSEEEEEEC-SSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred ccCcEEEEEEC-CCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 34567789998 899999999999999999998877 4666653 4599999995 4
Q ss_pred --ceEEEEecCCCCeeEEEEEcCCCeEE---------------------------------------EEE-eecCCceeE
Q 016446 153 --IMLLIFNRSSSHVPLKILSIEDGTVL---------------------------------------KVF-YHLLHRNKK 190 (389)
Q Consensus 153 --~~la~~~~~s~d~tiklWd~~tG~~l---------------------------------------~tl-~~~~~~~~~ 190 (389)
.+|++++ .|++|++||+.++++. +.+ .+|...+..
T Consensus 106 ~~~~l~s~s---~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 182 (447)
T 3dw8_B 106 NAAQFLLST---NDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINS 182 (447)
T ss_dssp SSSEEEEEE---CSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCE
T ss_pred CcceEEEeC---CCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEE
Confidence 5787764 4689999999886653 233 578999999
Q ss_pred EEEEecCCCeEEEEeCCCcEEEEECC-CCeEEE-------EcccCCCceEEEEEcCCC-cEEEEEc-CCeEEEEeCC-Cc
Q 016446 191 VDFIEQFNEKLLVKQENENLQILDVR-NAELME-------VSRTEFMTPSAFIFLYEN-QLFLTFR-NRTVAVWNFR-GE 259 (389)
Q Consensus 191 v~f~~~~~~~l~~~s~D~tIklWd~~-tg~~~~-------~l~gh~~~v~sv~fspdg-~~laS~s-D~tIklWd~~-G~ 259 (389)
++|+ |++..++++ .|++|+|||++ .+++++ .+.+|...|.+++|+|+| ++|++++ |++|++||+. ++
T Consensus 183 ~~~~-~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 260 (447)
T 3dw8_B 183 ISIN-SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASA 260 (447)
T ss_dssp EEEC-TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCS
T ss_pred EEEc-CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCc
Confidence 9998 678888887 89999999999 566666 478999999999999999 9999999 9999999997 88
Q ss_pred E----EEEeccCcCCcCC-------CCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCC-CeEEEEecCCCC
Q 016446 260 L----VTSFEDHLLWHPD-------CNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILT-GKCLAKINATNC 327 (389)
Q Consensus 260 ~----l~tl~gh~~~~~~-------~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~t-g~~l~tl~gH~~ 327 (389)
+ ++++++|..+... ..|.+++|+|||++|++++. ++|+|||+.+ ++++.++.+|..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~------------~~v~iwd~~~~~~~~~~~~~~~~ 328 (447)
T 3dw8_B 261 LCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY------------LSVKVWDLNMENRPVETYQVHEY 328 (447)
T ss_dssp SSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES------------SEEEEEETTCCSSCSCCEESCGG
T ss_pred cccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC------------CeEEEEeCCCCccccceeecccc
Confidence 7 7899998751000 02899999999999999863 8999999997 999999999972
Q ss_pred CCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 328 SPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
... .+.. ....+....+.+++|||||++||+|+.|++|++||.
T Consensus 329 ~~~--------------~l~~-----~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~ 371 (447)
T 3dw8_B 329 LRS--------------KLCS-----LYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDR 371 (447)
T ss_dssp GTT--------------THHH-----HHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEET
T ss_pred ccc--------------cccc-----cccccccccceEEEECCCCCEEEEeccCCEEEEEEc
Confidence 100 0000 000000013556999999999999999999999984
No 108
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.9e-38 Score=314.55 Aligned_cols=227 Identities=15% Similarity=0.145 Sum_probs=172.1
Q ss_pred EEEecCCCeEEEEecCCCeEEEEeCCCCeEEE--E---e--cCCcEEEEEEcC---------CceEEEEecCCCCeeEEE
Q 016446 106 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY--S---I--SDKHVQEIKISP---------GIMLLIFNRSSSHVPLKI 169 (389)
Q Consensus 106 v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~--t---l--~~~~V~~vafS~---------g~~la~~~~~s~d~tikl 169 (389)
+.| +|++++||+++.|++|||||+.++++.. . + |.+.|++|+|+| |++||++ +.|+||||
T Consensus 95 ~~~-~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~---s~D~tv~~ 170 (393)
T 4gq1_A 95 NSS-PVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASV---GDDCTLII 170 (393)
T ss_dssp --C-CEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEE---ETTSEEEE
T ss_pred eec-CCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEE---ECCCeEEE
Confidence 445 5899999999999999999999987642 2 2 346899999985 6788876 45699999
Q ss_pred EEcCCCeEEEEEeecCCceeEEEEEecCC-CeEEEEeCCCcEEEEECCCCeEEEE-------------------------
Q 016446 170 LSIEDGTVLKVFYHLLHRNKKVDFIEQFN-EKLLVKQENENLQILDVRNAELMEV------------------------- 223 (389)
Q Consensus 170 Wd~~tG~~l~tl~~~~~~~~~v~f~~~~~-~~l~~~s~D~tIklWd~~tg~~~~~------------------------- 223 (389)
||+.+++++..+..|...+.+|+|+ |++ .++++++.|++|||||++++++...
T Consensus 171 Wd~~~~~~~~~~~~~~~~v~~v~~~-p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 249 (393)
T 4gq1_A 171 WRLTDEGPILAGYPLSSPGISVQFR-PSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCH 249 (393)
T ss_dssp EEEETTEEEEEEEECSSCEEEEEEE-TTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC----
T ss_pred EECCCCceeeeecCCCCCcEEEEEC-CCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeee
Confidence 9999999999888888999999999 555 4688899999999999999876443
Q ss_pred cccCCCceEEEEEc-CCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCC----------------
Q 016446 224 SRTEFMTPSAFIFL-YENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSD---------------- 284 (389)
Q Consensus 224 l~gh~~~v~sv~fs-pdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpd---------------- 284 (389)
..+|...|.+++|+ |||++|++++ |++|++||+. +++...+.+|... +..+.|+|+
T Consensus 250 ~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (393)
T 4gq1_A 250 SSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMK-----LGPKNLLPNVQGISLFPSLLGACPH 324 (393)
T ss_dssp --CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC------------------------CCSCSEEEECSSCCSSCCEEC
T ss_pred cccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCc-----cccEEEccccccccccCcceeEEEc
Confidence 24788899999996 8999999999 9999999997 8888888888764 455555554
Q ss_pred ----CCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceeccccccc
Q 016446 285 ----QDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEAL 360 (389)
Q Consensus 285 ----G~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (389)
+.++++|+ .||+|+|||+.+|+++.++.+|.
T Consensus 325 ~~~~~~~~~sgs-----------~Dg~V~lwd~~~~~~~~~~~~~~---------------------------------- 359 (393)
T 4gq1_A 325 PRYMDYFATAHS-----------QHGLIQLINTYEKDSNSIPIQLG---------------------------------- 359 (393)
T ss_dssp SSCTTEEEEEET-----------TTTEEEEEETTCTTCCEEEEECS----------------------------------
T ss_pred cCCCCEEEEEEC-----------CCCEEEEEECCCCcEEEEecCCC----------------------------------
Confidence 34556654 46999999999999999999887
Q ss_pred CCEEEEEECCCCCEEEEecCCCc--EEEc
Q 016446 361 EDITSLFYDEERNEIYTGNRHGL--VHVW 387 (389)
Q Consensus 361 ~~V~svafSpdg~~LaSgs~D~t--IrlW 387 (389)
.+|++|+|||||++||+|++||. ||||
T Consensus 360 ~~V~svafspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 360 MPIVDFCWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp SCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence 59999999999999999998886 4444
No 109
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-38 Score=299.46 Aligned_cols=253 Identities=10% Similarity=0.069 Sum_probs=203.0
Q ss_pred ceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe-eecccCceeEEEecC
Q 016446 33 NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFVEFDDV 111 (389)
Q Consensus 33 g~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~p 111 (389)
|+++.++.+|. +.|.+++|+|+|+.||+ ++.| ..++||++..+.. ..+.. ..+...+.+++|+ |
T Consensus 1 G~~~~~~~~h~-~~v~~~~~s~~~~~l~~----~~~d------g~i~iw~~~~~~~---~~~~~~~~h~~~v~~~~~~-~ 65 (379)
T 3jrp_A 1 GSMVVIANAHN-ELIHDAVLDYYGKRLAT----CSSD------KTIKIFEVEGETH---KLIDTLTGHEGPVWRVDWA-H 65 (379)
T ss_dssp ----CCEEECC-CCEEEEEECSSSSEEEE----EETT------SCEEEEEEETTEE---EEEEEECCCSSCEEEEEEC-C
T ss_pred CCccEEecCCc-ccEEEEEEcCCCCEEEE----EECC------CcEEEEecCCCcc---eeeeEecCCCCcEEEEEeC-C
Confidence 67788899975 99999999999999999 4567 7889999873322 11211 2355567889998 5
Q ss_pred C--CeEEEEecCCCeEEEEeCCCCe--EEEEec--CCcEEEEEEcC---CceEEEEecCCCCeeEEEEEcCCCe--EEEE
Q 016446 112 N--GKVLTYSAQDSIYKVFDLKNYT--MLYSIS--DKHVQEIKISP---GIMLLIFNRSSSHVPLKILSIEDGT--VLKV 180 (389)
Q Consensus 112 d--G~~Las~s~D~tiklWdl~~g~--~l~tl~--~~~V~~vafS~---g~~la~~~~~s~d~tiklWd~~tG~--~l~t 180 (389)
+ +++|++++.|++|++||+.+++ ++..+. ...|.+++|+| +.+|++++ .|++|++||+.+++ ....
T Consensus 66 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~---~d~~i~v~d~~~~~~~~~~~ 142 (379)
T 3jrp_A 66 PKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS---SDGKVSVVEFKENGTTSPII 142 (379)
T ss_dssp GGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE---TTSEEEEEECCTTSCCCEEE
T ss_pred CCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEec---CCCcEEEEecCCCCceeeEE
Confidence 6 9999999999999999999997 566664 57899999994 67888774 45899999999884 4556
Q ss_pred EeecCCceeEEEEEec------------CCCeEEEEeCCCcEEEEECCCCe----EEEEcccCCCceEEEEEcCC---Cc
Q 016446 181 FYHLLHRNKKVDFIEQ------------FNEKLLVKQENENLQILDVRNAE----LMEVSRTEFMTPSAFIFLYE---NQ 241 (389)
Q Consensus 181 l~~~~~~~~~v~f~~~------------~~~~l~~~s~D~tIklWd~~tg~----~~~~l~gh~~~v~sv~fspd---g~ 241 (389)
+..|...+..++|++. ++..+++++.|++|++||+++++ ++..+.+|...|.+++|+|+ ++
T Consensus 143 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~ 222 (379)
T 3jrp_A 143 IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS 222 (379)
T ss_dssp EECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE
T ss_pred ecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCC
Confidence 7788899999999843 57889999999999999998764 66788999999999999999 99
Q ss_pred EEEEEc-CCeEEEEeCC-Cc---EEEEec--cCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCC
Q 016446 242 LFLTFR-NRTVAVWNFR-GE---LVTSFE--DHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL 314 (389)
Q Consensus 242 ~laS~s-D~tIklWd~~-G~---~l~tl~--gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~ 314 (389)
+|++++ |++|++||+. ++ ....+. +|... |.+++|+|||++||+++.| |+|+|||+.
T Consensus 223 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~g~~l~~~~~d-----------g~i~iw~~~ 286 (379)
T 3jrp_A 223 YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV-----LWRASWSLSGNVLALSGGD-----------NKVTLWKEN 286 (379)
T ss_dssp EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSC-----EEEEEECSSSCCEEEEESS-----------SSEEEEEEE
T ss_pred eEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCc-----EEEEEEcCCCCEEEEecCC-----------CcEEEEeCC
Confidence 999999 9999999996 53 333333 35544 8999999999999999865 999999998
Q ss_pred CCeEE
Q 016446 315 TGKCL 319 (389)
Q Consensus 315 tg~~l 319 (389)
++...
T Consensus 287 ~~~~~ 291 (379)
T 3jrp_A 287 LEGKW 291 (379)
T ss_dssp ETTEE
T ss_pred CCCcc
Confidence 65443
No 110
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=292.50 Aligned_cols=282 Identities=7% Similarity=0.040 Sum_probs=229.1
Q ss_pred cccEEEEEee-c----cEEEEEecCceEEEEeccc-ceee-eeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceee
Q 016446 3 RTKVIEIVAA-R----DIVFALAHSGVCAAFSRET-NRRI-CFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKC 75 (389)
Q Consensus 3 ~~~v~~i~~~-~----~~~a~~~~~gtiklW~~~t-g~~l-~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~ 75 (389)
...|..|.|+ . ++||+++.||+|++|++++ ++.+ ..+.+| ...|.+++|+|+|+.|+++ +.|
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~----~~d------ 107 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMH-TGPVLDVCWSDDGSKVFTA----SCD------ 107 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEEC-SSCEEEEEECTTSSEEEEE----ETT------
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccc-cCCEEEEEECcCCCEEEEE----cCC------
Confidence 4689999999 2 7999999999999999987 7776 777876 4899999999999999994 577
Q ss_pred eeeeEeEeccCCCCCcceeEeeecccCceeEEE--ecCCCeEEEEecCCCeEEEEeCCCCeEEEEec-CCcEEEEEEcCC
Q 016446 76 RSTKIEYIRRGKPDSGFALFESESLKWPGFVEF--DDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISPG 152 (389)
Q Consensus 76 ~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~F--s~pdG~~Las~s~D~tiklWdl~~g~~l~tl~-~~~V~~vafS~g 152 (389)
..+++|++..+++ +....+...+.+++| + |+|++|++++.|++|++||+.+++++.++. ...+.++.+.+.
T Consensus 108 g~v~iwd~~~~~~-----~~~~~~~~~v~~~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 181 (368)
T 3mmy_A 108 KTAKMWDLSSNQA-----IQIAQHDAPVKTIHWIKA-PNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYP 181 (368)
T ss_dssp SEEEEEETTTTEE-----EEEEECSSCEEEEEEEEC-SSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETT
T ss_pred CcEEEEEcCCCCc-----eeeccccCceEEEEEEeC-CCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCC
Confidence 8999999988875 222345566788999 7 899999999999999999999999888887 467888888855
Q ss_pred ceEEEEecCCCCeeEEEEEcCCCeEEEEEe--ecCCceeEEEEEecCCCe----EEEEeCCCcEEEEECCCC---eEEEE
Q 016446 153 IMLLIFNRSSSHVPLKILSIEDGTVLKVFY--HLLHRNKKVDFIEQFNEK----LLVKQENENLQILDVRNA---ELMEV 223 (389)
Q Consensus 153 ~~la~~~~~s~d~tiklWd~~tG~~l~tl~--~~~~~~~~v~f~~~~~~~----l~~~s~D~tIklWd~~tg---~~~~~ 223 (389)
..+ ++. .|+.+++|++.++....... .+.+....+.+. +.... +++++.|++|++||+..+ +++..
T Consensus 182 ~~~-~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~ 256 (368)
T 3mmy_A 182 MAV-VAT---AERGLIVYQLENQPSEFRRIESPLKHQHRCVAIF-KDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFT 256 (368)
T ss_dssp EEE-EEE---GGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEE-ECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEE
T ss_pred eeE-EEe---CCCcEEEEEeccccchhhhccccccCCCceEEEc-ccCCCCCCeEEEecCCCcEEEEecCCCCcccccee
Confidence 444 443 34799999998866544332 233455666665 33333 888999999999999988 66788
Q ss_pred cccCCC------------ceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEE
Q 016446 224 SRTEFM------------TPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLII 289 (389)
Q Consensus 224 l~gh~~------------~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~la 289 (389)
+.+|.. .|.+++|+|+|++|++++ |++|++||++ ++++.++.+|..+ |.+++|||||++||
T Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----v~~~~~s~~g~~l~ 331 (368)
T 3mmy_A 257 FKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQP-----ISACCFNHNGNIFA 331 (368)
T ss_dssp EECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSC-----EEEEEECTTSSCEE
T ss_pred eeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCC-----ceEEEECCCCCeEE
Confidence 888887 799999999999999998 9999999997 9999999999887 89999999999999
Q ss_pred EEecCCCcccccCCCCCeEEEEeCCCCeEE
Q 016446 290 SYCKAEPEDQWMEGSAGSINVSSILTGKCL 319 (389)
Q Consensus 290 S~s~D~~~~~~~~s~D~tIklWd~~tg~~l 319 (389)
+++.| +.+..+++|+.+..+.+
T Consensus 332 ~~s~d--------~~~~~~~~~~~~~~~~i 353 (368)
T 3mmy_A 332 YASSY--------DWSKGHEFYNPQKKNYI 353 (368)
T ss_dssp EEECC--------CSTTCGGGCCTTSCCEE
T ss_pred EEecc--------cccccccccCCCcccee
Confidence 99876 23455666666655444
No 111
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-37 Score=306.95 Aligned_cols=236 Identities=13% Similarity=0.171 Sum_probs=199.4
Q ss_pred CceeEEEecCCCeEE-EEecCCCeEEEEeCC--CCeEEEEec----CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcC
Q 016446 102 WPGFVEFDDVNGKVL-TYSAQDSIYKVFDLK--NYTMLYSIS----DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIE 173 (389)
Q Consensus 102 ~~~~v~Fs~pdG~~L-as~s~D~tiklWdl~--~g~~l~tl~----~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~ 173 (389)
.+.+++|+ |||++| |+++.|++|+|||+. +++++..+. ...|.+++|+ +|.+|++++. |+.|++|++.
T Consensus 104 ~v~~~~~s-~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---~g~v~~~~~~ 179 (450)
T 2vdu_B 104 YIRNLRLT-SDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK---FGDVYSIDIN 179 (450)
T ss_dssp CEEEEEEC-TTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET---TSEEEEEETT
T ss_pred ceEEEEEc-CCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC---CCcEEEEecC
Confidence 57789998 899996 999999999999998 888887763 4689999999 5888888743 5899999999
Q ss_pred CCeEEE----EEeecCCceeEEEEEecC---CCeEEEEeCCCcEEEEECCCCeEEEE-cccCCCceEEEEEcCCCcEEEE
Q 016446 174 DGTVLK----VFYHLLHRNKKVDFIEQF---NEKLLVKQENENLQILDVRNAELMEV-SRTEFMTPSAFIFLYENQLFLT 245 (389)
Q Consensus 174 tG~~l~----tl~~~~~~~~~v~f~~~~---~~~l~~~s~D~tIklWd~~tg~~~~~-l~gh~~~v~sv~fspdg~~laS 245 (389)
++++.. ++.+|...+..++|+ |+ +..|++++.|++|+|||+.+++++.. +.+|...|.+++|+ ||++|++
T Consensus 180 ~~~~~~~~~~~~~~h~~~v~~~~~s-p~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s 257 (450)
T 2vdu_B 180 SIPEEKFTQEPILGHVSMLTDVHLI-KDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLS 257 (450)
T ss_dssp SCCCSSCCCCCSEECSSCEEEEEEE-ECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEE
T ss_pred CcccccccceeeecccCceEEEEEc-CCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEE
Confidence 988665 888999999999999 66 66888899999999999999999887 77999999999999 9999999
Q ss_pred Ec-CCeEEEEeCC-CcEEEEeccCcC-----------C---------cCCCCeeEEEECCCCCEEEEEecCCCcccccCC
Q 016446 246 FR-NRTVAVWNFR-GELVTSFEDHLL-----------W---------HPDCNTNNIYITSDQDLIISYCKAEPEDQWMEG 303 (389)
Q Consensus 246 ~s-D~tIklWd~~-G~~l~tl~gh~~-----------~---------~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s 303 (389)
++ |++|+|||+. |+++.++..|.. + .....|.+++|+|||++|++++.+
T Consensus 258 ~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~--------- 328 (450)
T 2vdu_B 258 AGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA--------- 328 (450)
T ss_dssp EESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETT---------
T ss_pred EeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECC---------
Confidence 99 9999999997 999999875420 0 011237899999999999999732
Q ss_pred CCCeEEEEeC--CCC---eEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEe
Q 016446 304 SAGSINVSSI--LTG---KCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTG 378 (389)
Q Consensus 304 ~D~tIklWd~--~tg---~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSg 378 (389)
|++|+|||+ .++ +++.++.+|. .|++++|+|++.+++.+
T Consensus 329 -d~~i~iw~~~~~~~~~l~~~~~~~~~~-----------------------------------~v~~~~~~~~~~~v~~~ 372 (450)
T 2vdu_B 329 -TKCIIILEMSEKQKGDLALKQIITFPY-----------------------------------NVISLSAHNDEFQVTLD 372 (450)
T ss_dssp -CSEEEEEEECSSSTTCEEEEEEEECSS-----------------------------------CEEEEEEETTEEEEEEC
T ss_pred -CCeEEEEEeccCCCCceeeccEeccCC-----------------------------------ceEEEEecCCcEEEEEe
Confidence 599999999 777 8889998884 79999999976555555
Q ss_pred cC------CCcEEEcc
Q 016446 379 NR------HGLVHVWS 388 (389)
Q Consensus 379 s~------D~tIrlW~ 388 (389)
+. +..|++|.
T Consensus 373 ~~~~~~~~~~~i~v~~ 388 (450)
T 2vdu_B 373 NKESSGVQKNFAKFIE 388 (450)
T ss_dssp CTTCCSSCCCSEEEEE
T ss_pred cccCCCCCCcceEEEE
Confidence 54 55688885
No 112
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=9.8e-38 Score=307.08 Aligned_cols=278 Identities=15% Similarity=0.161 Sum_probs=222.8
Q ss_pred EEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEecc-CCCCCcceeEeeecccCceeEEEecC-CCeEEEEecCCCe
Q 016446 47 IRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRR-GKPDSGFALFESESLKWPGFVEFDDV-NGKVLTYSAQDSI 124 (389)
Q Consensus 47 v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~-g~~~~~~~l~~~~~~~~~~~v~Fs~p-dG~~Las~s~D~t 124 (389)
...++++|+...++.+ ++.| ..++||++.. |+.......+ ..+...+.+++|+ | ++++||+|+.|++
T Consensus 37 ~~~~~~~~~~~~~~~~---~~~~------g~i~v~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~-p~~~~~l~s~s~dg~ 105 (402)
T 2aq5_A 37 SGFCAVNPKFMALICE---ASGG------GAFLVLPLGKTGRVDKNVPLV-CGHTAPVLDIAWC-PHNDNVIASGSEDCT 105 (402)
T ss_dssp SCSEEECSSEEEEEBC---CSSS------CCEEEEETTCCEECCTTCCCB-CCCSSCEEEEEEC-TTCTTEEEEEETTSE
T ss_pred CCcEEECCCeEEEEEE---EcCC------CEEEEEECccCCCCCCCCceE-ecCCCCEEEEEeC-CCCCCEEEEEeCCCe
Confidence 3458889977654431 4566 7899999843 3321111122 2455667889998 7 9999999999999
Q ss_pred EEEEeCCCC-------eEEEEec--CCcEEEEEEcC-C-ceEEEEecCCCCeeEEEEEcCCCeEEEEE--eecCCceeEE
Q 016446 125 YKVFDLKNY-------TMLYSIS--DKHVQEIKISP-G-IMLLIFNRSSSHVPLKILSIEDGTVLKVF--YHLLHRNKKV 191 (389)
Q Consensus 125 iklWdl~~g-------~~l~tl~--~~~V~~vafS~-g-~~la~~~~~s~d~tiklWd~~tG~~l~tl--~~~~~~~~~v 191 (389)
|+|||+.++ +++.++. ...|.+++|+| + .+|++++ .|++|++||+.+|+++.++ ..|...+..+
T Consensus 106 v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 182 (402)
T 2aq5_A 106 VMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAG---CDNVILVWDVGTGAAVLTLGPDVHPDTIYSV 182 (402)
T ss_dssp EEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEE---TTSCEEEEETTTTEEEEEECTTTCCSCEEEE
T ss_pred EEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEc---CCCEEEEEECCCCCccEEEecCCCCCceEEE
Confidence 999999988 5555554 57899999995 4 4787764 4589999999999999999 7899999999
Q ss_pred EEEecCCCeEEEEeCCCcEEEEECCCCeEEEEc-ccCCCc-eEEEEEcCCCcEEEEE---c-CCeEEEEeCC-CcE-EEE
Q 016446 192 DFIEQFNEKLLVKQENENLQILDVRNAELMEVS-RTEFMT-PSAFIFLYENQLFLTF---R-NRTVAVWNFR-GEL-VTS 263 (389)
Q Consensus 192 ~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l-~gh~~~-v~sv~fspdg~~laS~---s-D~tIklWd~~-G~~-l~t 263 (389)
+|+ |++..+++++.|++|++||+++++++..+ .+|... +..++|+|+|++|+++ + |++|++||+. ++. +..
T Consensus 183 ~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~ 261 (402)
T 2aq5_A 183 DWS-RDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSL 261 (402)
T ss_dssp EEC-TTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEE
T ss_pred EEC-CCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceE
Confidence 998 68899999999999999999999999998 789876 8999999999999999 6 9999999996 553 333
Q ss_pred ec-cCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeE-EEEecCCCCCCCcccccCCCCCC
Q 016446 264 FE-DHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC-LAKINATNCSPKVDDELGSSSTG 341 (389)
Q Consensus 264 l~-gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~-l~tl~gH~~~~~~~~~~~~~~~~ 341 (389)
+. +|... |..++|+|||++|+.++. .|++|++||+.+++. +..+.+|..
T Consensus 262 ~~~~~~~~-----v~~~~~s~~~~~l~~~g~----------~dg~i~i~d~~~~~~~~~~l~~~~~-------------- 312 (402)
T 2aq5_A 262 QELDTSSG-----VLLPFFDPDTNIVYLCGK----------GDSSIRYFEITSEAPFLHYLSMFSS-------------- 312 (402)
T ss_dssp EECCCCSS-----CEEEEEETTTTEEEEEET----------TCSCEEEEEECSSTTCEEEEEEECC--------------
T ss_pred EeccCCCc-----eeEEEEcCCCCEEEEEEc----------CCCeEEEEEecCCCcceEeeccccc--------------
Confidence 33 34443 799999999999975542 369999999999884 777777651
Q ss_pred CccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEcc
Q 016446 342 KSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
...|.+++|+|||+.+++ .|+.+|+|+
T Consensus 313 ------------------~~~v~~~~~sp~~~~~~s--~~~~~~~~~ 339 (402)
T 2aq5_A 313 ------------------KESQRGMGYMPKRGLEVN--KCEIARFYK 339 (402)
T ss_dssp ------------------SSCCSEEEECCGGGSCGG--GTEEEEEEE
T ss_pred ------------------CCcccceEEeccccccee--cceeEEEEE
Confidence 158999999999999875 567999997
No 113
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=9.5e-37 Score=298.34 Aligned_cols=227 Identities=10% Similarity=0.115 Sum_probs=188.4
Q ss_pred cccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeE
Q 016446 99 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTV 177 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~ 177 (389)
+...+.+|+|+ |||++||+|+.| .++|||+.+++++...+...+..++++ ++..++.. ++.|++|+|||+.+|++
T Consensus 18 h~~~V~~v~fs-~dg~~la~g~~~-~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~v~iWd~~~~~~ 93 (355)
T 3vu4_A 18 VSNPVTDYEFN-QDQSCLILSTLK-SFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFV--TGVKEVVHIWDDVKKQD 93 (355)
T ss_dssp -CCCCCEEEEC-TTSSEEEEECSS-EEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEE--CSSTTEEEEEETTTTEE
T ss_pred CCCceEEEEEC-CCCCEEEEEcCC-EEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEE--ECCccEEEEEECCCCcE
Confidence 44567889998 999999999876 589999999988877665567788888 56677554 34468999999999999
Q ss_pred EEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCC-eEEEEcccCCCceEEEEEcCCCcEEEE--Ec-CCeEEE
Q 016446 178 LKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNA-ELMEVSRTEFMTPSAFIFLYENQLFLT--FR-NRTVAV 253 (389)
Q Consensus 178 l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg-~~~~~l~gh~~~v~sv~fspdg~~laS--~s-D~tIkl 253 (389)
+.++. |...+..+.|+ ++.++++ .|++|+|||+.++ ++++++.. ....++|+| +++|. ++ ||+|++
T Consensus 94 ~~~~~-~~~~v~~v~~~---~~~~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 94 VSRIK-VDAPVKDLFLS---REFIVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHI 163 (355)
T ss_dssp EEEEE-CSSCEEEEEEC---SSEEEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEE
T ss_pred EEEEE-CCCceEEEEEc---CCEEEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEE
Confidence 99998 45788999986 3344443 5889999999998 77777665 555678888 55655 46 999999
Q ss_pred EeCC-Cc----------------EEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCe-EEEEeCCC
Q 016446 254 WNFR-GE----------------LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGS-INVSSILT 315 (389)
Q Consensus 254 Wd~~-G~----------------~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~t-IklWd~~t 315 (389)
||+. ++ ++.++.+|... |.+++|||||++|||||.| ++ |||||+.+
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~-----v~~~~~s~~g~~l~s~s~d-----------~~~v~iwd~~~ 227 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNP-----IKMVRLNRKSDMVATCSQD-----------GTIIRVFKTED 227 (355)
T ss_dssp EECCC------------------CCEEECCCSSC-----EEEEEECTTSSEEEEEETT-----------CSEEEEEETTT
T ss_pred EECCCCCccccccccccccccCcccEEEEccCCc-----eEEEEECCCCCEEEEEeCC-----------CCEEEEEECCC
Confidence 9997 55 37899999987 8999999999999999875 88 99999999
Q ss_pred CeEEEEec-C-CCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 316 GKCLAKIN-A-TNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 316 g~~l~tl~-g-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
|+++.+++ | |. ..|++++|||||++||+|+.|++|++||.
T Consensus 228 ~~~~~~~~~g~h~----------------------------------~~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 228 GVLVREFRRGLDR----------------------------------ADVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp CCEEEEEECTTCC----------------------------------SCEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred CcEEEEEEcCCCC----------------------------------CcEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 99999998 6 87 59999999999999999999999999983
No 114
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.7e-35 Score=286.09 Aligned_cols=258 Identities=10% Similarity=0.093 Sum_probs=216.2
Q ss_pred ecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEE-EEecCCCeEEEEeCCCCeEEEEec-CCc
Q 016446 66 ASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVL-TYSAQDSIYKVFDLKNYTMLYSIS-DKH 143 (389)
Q Consensus 66 ~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~L-as~s~D~tiklWdl~~g~~l~tl~-~~~ 143 (389)
++.| ..+++|++.+|++ +.....-..+.+++|+ |||++| ++++.|++|++||+.+++++.++. +..
T Consensus 8 ~~~d------~~v~v~d~~~~~~-----~~~~~~~~~~~~~~~s-~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 75 (391)
T 1l0q_A 8 NSES------DNISVIDVTSNKV-----TATIPVGSNPMGAVIS-PDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS 75 (391)
T ss_dssp ETTT------TEEEEEETTTTEE-----EEEEECSSSEEEEEEC-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS
T ss_pred cCCC------CEEEEEECCCCeE-----EEEeecCCCcceEEEC-CCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCC
Confidence 5677 7899999988876 2221222346789998 899876 788899999999999999988886 568
Q ss_pred EEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeE-EEEeCCCcEEEEECCCCeEE
Q 016446 144 VQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKL-LVKQENENLQILDVRNAELM 221 (389)
Q Consensus 144 V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l-~~~s~D~tIklWd~~tg~~~ 221 (389)
|.+++|+ +|++|+++. +.|++|++||+.+|+++..+..| ..+..++|+ |++..+ ++++.|++|++||+.+++++
T Consensus 76 v~~~~~spdg~~l~~~~--~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s-~dg~~l~~~~~~~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTN--MASSTLSVIDTTSNTVAGTVKTG-KSPLGLALS-PDGKKLYVTNNGDKTVSVINTVTKAVI 151 (391)
T ss_dssp EEEEEECTTSSEEEEEE--TTTTEEEEEETTTTEEEEEEECS-SSEEEEEEC-TTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred ccceEECCCCCEEEEEE--CCCCEEEEEECCCCeEEEEEeCC-CCcceEEEC-CCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 9999999 578786663 44589999999999999999865 567899998 677777 45678999999999999999
Q ss_pred EEcccCCCceEEEEEcCCCcEE-EEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcc
Q 016446 222 EVSRTEFMTPSAFIFLYENQLF-LTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPED 298 (389)
Q Consensus 222 ~~l~gh~~~v~sv~fspdg~~l-aS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~ 298 (389)
..+..|. .+..++|+|+|++| ++++ |++|++||+. ++++..+..+. . +.+++|+|||++|++++.+
T Consensus 152 ~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~-----~~~~~~~~~g~~l~~~~~~---- 220 (391)
T 1l0q_A 152 NTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA-A-----PSGIAVNPEGTKAYVTNVD---- 220 (391)
T ss_dssp EEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-E-----EEEEEECTTSSEEEEEEEC----
T ss_pred EEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC-C-----ccceEECCCCCEEEEEecC----
Confidence 9988775 57999999999877 6777 9999999997 88888887543 2 6899999999999998742
Q ss_pred cccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEE-EE
Q 016446 299 QWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEI-YT 377 (389)
Q Consensus 299 ~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~L-aS 377 (389)
..|++|++||+.+++++..+..|. .+.+++|+|||+.| ++
T Consensus 221 ----~~~~~v~~~d~~~~~~~~~~~~~~-----------------------------------~~~~~~~s~dg~~l~~s 261 (391)
T 1l0q_A 221 ----KYFNTVSMIDTGTNKITARIPVGP-----------------------------------DPAGIAVTPDGKKVYVA 261 (391)
T ss_dssp ----SSCCEEEEEETTTTEEEEEEECCS-----------------------------------SEEEEEECTTSSEEEEE
T ss_pred ----cCCCcEEEEECCCCeEEEEEecCC-----------------------------------CccEEEEccCCCEEEEE
Confidence 136999999999999999999876 68899999999987 78
Q ss_pred ecCCCcEEEccC
Q 016446 378 GNRHGLVHVWSN 389 (389)
Q Consensus 378 gs~D~tIrlW~~ 389 (389)
++.|++|++||.
T Consensus 262 ~~~d~~v~v~d~ 273 (391)
T 1l0q_A 262 LSFXNTVSVIDT 273 (391)
T ss_dssp ETTTTEEEEEET
T ss_pred cCCCCEEEEEEC
Confidence 899999999983
No 115
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=100.00 E-value=8.2e-36 Score=311.02 Aligned_cols=319 Identities=9% Similarity=0.072 Sum_probs=249.7
Q ss_pred ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEe--ccCCCCC
Q 016446 13 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYI--RRGKPDS 90 (389)
Q Consensus 13 ~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i--~~g~~~~ 90 (389)
+.++++.+.|++|++||..+|+++.++..++ . +.+++|||||++|++++ .| ..+++||+ .++++
T Consensus 149 ~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~-~-~~~v~~spdg~~l~v~~----~d------~~V~v~D~~~~t~~~-- 214 (543)
T 1nir_A 149 NLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-A-VHISRMSASGRYLLVIG----RD------ARIDMIDLWAKEPTK-- 214 (543)
T ss_dssp GEEEEEEGGGTEEEEEETTTCCEEEEEECST-T-EEEEEECTTSCEEEEEE----TT------SEEEEEETTSSSCEE--
T ss_pred CEEEEEEcCCCeEEEEECCCceEEEEEecCc-c-cceEEECCCCCEEEEEC----CC------CeEEEEECcCCCCcE--
Confidence 7889999999999999999999999999655 3 89999999999999954 55 67899998 67665
Q ss_pred cceeEeeecccCceeEEEecC----CCeEEEEecC-CCeEEEEeCCCCeEEEEecC-------------CcEEEEEEcC-
Q 016446 91 GFALFESESLKWPGFVEFDDV----NGKVLTYSAQ-DSIYKVFDLKNYTMLYSISD-------------KHVQEIKISP- 151 (389)
Q Consensus 91 ~~~l~~~~~~~~~~~v~Fs~p----dG~~Las~s~-D~tiklWdl~~g~~l~tl~~-------------~~V~~vafS~- 151 (389)
+.+...-..|..++|| | ||++|++++. |++|+|||..+++++.++.. ..|.+++|||
T Consensus 215 ---~~~i~~g~~p~~va~s-p~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~ 290 (543)
T 1nir_A 215 ---VAEIKIGIEARSVESS-KFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE 290 (543)
T ss_dssp ---EEEEECCSEEEEEEEC-CSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSS
T ss_pred ---EEEEecCCCcceEEeC-CCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCC
Confidence 2222234457889998 9 9999998884 89999999999999887752 2699999994
Q ss_pred CceEEEEecCCCCeeEEEEEcCCCeEEE--EEeecCCceeEEEEEecCCCeEEEEe-CCCcEEEEECCCCeEEEEccc--
Q 016446 152 GIMLLIFNRSSSHVPLKILSIEDGTVLK--VFYHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAELMEVSRT-- 226 (389)
Q Consensus 152 g~~la~~~~~s~d~tiklWd~~tG~~l~--tl~~~~~~~~~v~f~~~~~~~l~~~s-~D~tIklWd~~tg~~~~~l~g-- 226 (389)
+..++++. ..+++|.+||+.++++++ ++. +......++|+ |++.++++++ .|++|++||.++|+++.++..
T Consensus 291 ~~~~~vs~--~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~s-pdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~ 366 (543)
T 1nir_A 291 HPEFIVNV--KETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWD-SSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGK 366 (543)
T ss_dssp SSEEEEEE--TTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEEC-TTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSS
T ss_pred CCEEEEEE--CCCCeEEEEEecCCCcceeEEec-cCcCccCceEC-CCCCEEEEEecCCCeEEEEECCCCeEEEeeccCC
Confidence 66666553 456899999999987766 443 55677899998 7888777654 799999999999999998874
Q ss_pred --CCCceEEEEEcCC-CcEEEEEc--CCeEEEEeCC--------CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEec
Q 016446 227 --EFMTPSAFIFLYE-NQLFLTFR--NRTVAVWNFR--------GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 293 (389)
Q Consensus 227 --h~~~v~sv~fspd-g~~laS~s--D~tIklWd~~--------G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~ 293 (389)
|......+ ++|+ |++++|++ |++|++||.+ +++++++++|... +..|+|||||++|.+++.
T Consensus 367 ~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~-----~~~v~~~pdg~~l~v~~~ 440 (543)
T 1nir_A 367 TPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG-----SLFIKTHPKSSHLYVDTT 440 (543)
T ss_dssp SBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC-----CCCEECCTTCCEEEECCT
T ss_pred CCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCC-----ceEEEcCCCCCcEEEecC
Confidence 66555555 4666 88899985 8999999983 6899999999866 589999999999999763
Q ss_pred CCCcccccCCCCCeEEEEeCCCCeEE-EEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCC
Q 016446 294 AEPEDQWMEGSAGSINVSSILTGKCL-AKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEER 372 (389)
Q Consensus 294 D~~~~~~~~s~D~tIklWd~~tg~~l-~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg 372 (389)
-+++ ...+++|++||+.+++++ ..|.--+ |..+.++-..|..++|+|||
T Consensus 441 ~~~~----~~~~~~v~v~d~~~~~~~~~~~~v~~--------------------------~~~~~~~~~~~~~~~~~~~g 490 (543)
T 1nir_A 441 FNPD----ARISQSVAVFDLKNLDAKYQVLPIAE--------------------------WADLGEGAKRVVQPEYNKRG 490 (543)
T ss_dssp TCSS----HHHHTCEEEEETTCTTSCCEEECHHH--------------------------HHCCCSSCCEEEEEEECSSS
T ss_pred CCCC----cccCceEEEEECCCCCCCeEEeechh--------------------------hcccCCCCCceEeccCCCCC
Confidence 1000 001479999999999988 5552100 00111112689999999999
Q ss_pred CEEEEe-----cCCCcEEEccC
Q 016446 373 NEIYTG-----NRHGLVHVWSN 389 (389)
Q Consensus 373 ~~LaSg-----s~D~tIrlW~~ 389 (389)
++|+.+ +.|++|.+||.
T Consensus 491 ~~~~~s~~~~~~~~~~i~v~D~ 512 (543)
T 1nir_A 491 DEVWFSVWNGKNDSSALVVVDD 512 (543)
T ss_dssp SEEEEEEECCTTSCCEEEEEET
T ss_pred CEEEEEeecCCCCCCeEEEEEC
Confidence 999966 35899999983
No 116
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-37 Score=301.36 Aligned_cols=224 Identities=8% Similarity=0.067 Sum_probs=191.8
Q ss_pred CCCeEEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEEEcCCceEEEEecCCCCeeEEEEEc---------CCCeEEEEE
Q 016446 111 VNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSI---------EDGTVLKVF 181 (389)
Q Consensus 111 pdG~~Las~s~D~tiklWdl~~g~~l~tl~~~~V~~vafS~g~~la~~~~~s~d~tiklWd~---------~tG~~l~tl 181 (389)
+|+++||+|+.|++|++||+++++++.++....|.+++|+|. ++++ +.|++|++|+. .++++++.+
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~--~~s~---s~D~~i~~w~~~~~~~~~~~~~~~~~~~~ 120 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA--IISR---GPCNRLLLLYPGNQITILDSKTNKVLREI 120 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS--EEEE---CSTTEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc--eEEe---cCCCeEEEEEccCceEEeecCCcceeEEe
Confidence 578999999999999999999999998888778889999987 6665 55689999954 477778777
Q ss_pred e-ecCCceeEEEEEec--CCCeEEEEeCCCcEEEEECCCCeEEEEccc-CCCceEEEEEcCCCcEEEEEc-CCeEEEEeC
Q 016446 182 Y-HLLHRNKKVDFIEQ--FNEKLLVKQENENLQILDVRNAELMEVSRT-EFMTPSAFIFLYENQLFLTFR-NRTVAVWNF 256 (389)
Q Consensus 182 ~-~~~~~~~~v~f~~~--~~~~l~~~s~D~tIklWd~~tg~~~~~l~g-h~~~v~sv~fspdg~~laS~s-D~tIklWd~ 256 (389)
. +|...+..++|+ | ++.++++++.|++|+|||++++++++...+ |...+.+++|+|||++||+|+ |++|+|||+
T Consensus 121 ~~~~~~~v~~~~~~-~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~ 199 (343)
T 3lrv_A 121 EVDSANEIIYMYGH-NEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNL 199 (343)
T ss_dssp ECCCSSCEEEEECC-C---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEES
T ss_pred ecCCCCCEEEEEcC-CCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 7 677789999998 6 788999999999999999999999887744 555899999999999999998 999999999
Q ss_pred C-CcEE-EEecc-CcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCccc
Q 016446 257 R-GELV-TSFED-HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDD 333 (389)
Q Consensus 257 ~-G~~l-~tl~g-h~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~ 333 (389)
+ ++++ .++++ |..+ |.+++|+|||++||+++ | ++|+|||+.+++++.++..+..+.
T Consensus 200 ~~~~~~~~~~~~~h~~~-----v~~l~fs~~g~~l~s~~-~-----------~~v~iwd~~~~~~~~~~~~~~~~~---- 258 (343)
T 3lrv_A 200 SSPDQASSRFPVDEEAK-----IKEVKFADNGYWMVVEC-D-----------QTVVCFDLRKDVGTLAYPTYTIPE---- 258 (343)
T ss_dssp SCTTSCCEECCCCTTSC-----EEEEEECTTSSEEEEEE-S-----------SBEEEEETTSSTTCBSSCCCBC------
T ss_pred CCCCCCccEEeccCCCC-----EEEEEEeCCCCEEEEEe-C-----------CeEEEEEcCCCCcceeeccccccc----
Confidence 7 8887 88998 9877 89999999999999997 3 599999999999887777643100
Q ss_pred ccCCCCCCCccccccccceecccccccCCE--EEEEECCCCCEEEEecC-CCcEEEcc
Q 016446 334 ELGSSSTGKSKKLNKSSYIRSTVGEALEDI--TSLFYDEERNEIYTGNR-HGLVHVWS 388 (389)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V--~svafSpdg~~LaSgs~-D~tIrlW~ 388 (389)
..+ .+++|+|+|++||+|+. |+.|++|+
T Consensus 259 ---------------------------~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~ 289 (343)
T 3lrv_A 259 ---------------------------FKTGTVTYDIDDSGKNMIAYSNESNSLTIYK 289 (343)
T ss_dssp ------------------------------CCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ---------------------------ccccceEEEECCCCCEEEEecCCCCcEEEEE
Confidence 122 46999999999999998 99999996
No 117
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=9.6e-37 Score=299.98 Aligned_cols=271 Identities=10% Similarity=0.114 Sum_probs=217.4
Q ss_pred EEEecCceEEEEeccc-ce---eeeeeecCCcceEEEEEEee-CCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCc
Q 016446 17 FALAHSGVCAAFSRET-NR---RICFLNVSPDEVIRSLFYNK-NNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSG 91 (389)
Q Consensus 17 a~~~~~gtiklW~~~t-g~---~l~tl~~~~~~~v~sv~~sp-dg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~ 91 (389)
++++.||+|++|++.+ |+ .+..+.+| ...|.+++|+| +++.|++ ++.| ..++||++..++....
T Consensus 51 ~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h-~~~V~~~~~~p~~~~~l~s----~s~d------g~v~vw~~~~~~~~~~ 119 (402)
T 2aq5_A 51 CEASGGGAFLVLPLGKTGRVDKNVPLVCGH-TAPVLDIAWCPHNDNVIAS----GSED------CTVMVWEIPDGGLVLP 119 (402)
T ss_dssp BCCSSSCCEEEEETTCCEECCTTCCCBCCC-SSCEEEEEECTTCTTEEEE----EETT------SEEEEEECCTTCCSSC
T ss_pred EEEcCCCEEEEEECccCCCCCCCCceEecC-CCCEEEEEeCCCCCCEEEE----EeCC------CeEEEEEccCCCCccc
Confidence 3468899999999854 33 45567776 48999999999 8999999 4577 8899999988854210
Q ss_pred --ceeEe-eecccCceeEEEecCCC-eEEEEecCCCeEEEEeCCCCeEEEEe----cCCcEEEEEEc-CCceEEEEecCC
Q 016446 92 --FALFE-SESLKWPGFVEFDDVNG-KVLTYSAQDSIYKVFDLKNYTMLYSI----SDKHVQEIKIS-PGIMLLIFNRSS 162 (389)
Q Consensus 92 --~~l~~-~~~~~~~~~v~Fs~pdG-~~Las~s~D~tiklWdl~~g~~l~tl----~~~~V~~vafS-~g~~la~~~~~s 162 (389)
..+.. ..+...+..++|+ |+| .+|++++.|++|++||+.+++++.++ +...|.+++|+ +|.+|++++
T Consensus 120 ~~~~~~~~~~h~~~v~~~~~~-p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--- 195 (402)
T 2aq5_A 120 LREPVITLEGHTKRVGIVAWH-PTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC--- 195 (402)
T ss_dssp BCSCSEEEECCSSCEEEEEEC-SSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE---
T ss_pred cCCceEEecCCCCeEEEEEEC-cCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe---
Confidence 11111 2455667889998 888 69999999999999999999999998 35789999999 588888874
Q ss_pred CCeeEEEEEcCCCeEEEEE-eecCCc-eeEEEEEecCCCeEEEE---eCCCcEEEEECCCCeE-EEEc-ccCCCceEEEE
Q 016446 163 SHVPLKILSIEDGTVLKVF-YHLLHR-NKKVDFIEQFNEKLLVK---QENENLQILDVRNAEL-MEVS-RTEFMTPSAFI 235 (389)
Q Consensus 163 ~d~tiklWd~~tG~~l~tl-~~~~~~-~~~v~f~~~~~~~l~~~---s~D~tIklWd~~tg~~-~~~l-~gh~~~v~sv~ 235 (389)
.|++|++||+++|+++.++ ..|.+. +..+.|+ |++..++++ +.|++|++||+++++. +... ..|...+.+++
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 274 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFV-SEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPF 274 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEEC-STTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEE
T ss_pred cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEc-CCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEE
Confidence 4589999999999999999 677665 7999998 667777777 6999999999998764 3332 35778899999
Q ss_pred EcCCCcEEE-EEc-CCeEEEEeCC-Cc-EEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEE
Q 016446 236 FLYENQLFL-TFR-NRTVAVWNFR-GE-LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVS 311 (389)
Q Consensus 236 fspdg~~la-S~s-D~tIklWd~~-G~-~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklW 311 (389)
|+|+|++|+ +++ |++|++||+. ++ ++..+..|... ..|.+++|+|||++++++ |+.+|+|
T Consensus 275 ~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~---~~v~~~~~sp~~~~~~s~-------------~~~~~~~ 338 (402)
T 2aq5_A 275 FDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSK---ESQRGMGYMPKRGLEVNK-------------CEIARFY 338 (402)
T ss_dssp EETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCS---SCCSEEEECCGGGSCGGG-------------TEEEEEE
T ss_pred EcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccC---CcccceEEecccccceec-------------ceeEEEE
Confidence 999999986 566 9999999997 66 36677766521 127999999999999864 3799999
Q ss_pred eCCCCeEE
Q 016446 312 SILTGKCL 319 (389)
Q Consensus 312 d~~tg~~l 319 (389)
++.++++.
T Consensus 339 ~l~~~~~~ 346 (402)
T 2aq5_A 339 KLHERKCE 346 (402)
T ss_dssp EEETTEEE
T ss_pred EcCCCcEE
Confidence 99988764
No 118
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.8e-36 Score=285.18 Aligned_cols=262 Identities=8% Similarity=0.036 Sum_probs=221.6
Q ss_pred cccEEEEEee--ccEEEEEecCceEEEEecccce---eeeeeecCCcceEEEEEEeeCCC-EEEEEEEeecCCCcceeee
Q 016446 3 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNR---RICFLNVSPDEVIRSLFYNKNND-SLITVSVYASDNFSSLKCR 76 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~---~l~tl~~~~~~~v~sv~~spdg~-~l~s~s~~~~~d~~~l~~~ 76 (389)
...|.+|.|+ +++||+++.||+|++|++.+++ .+..+.+| ...|.+++|+|+|+ .|+++ +.| .
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~----~~d------g 79 (342)
T 1yfq_A 11 KDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRY-KHPLLCCNFIDNTDLQIYVG----TVQ------G 79 (342)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEEC-SSCEEEEEEEESSSEEEEEE----ETT------S
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeec-CCceEEEEECCCCCcEEEEE----cCC------C
Confidence 3579999999 8899999999999999998777 35556665 48999999999999 99994 467 7
Q ss_pred eeeEeEe-ccCCCCCcceeEeee--cccCceeEEEecCCCeEEEEecCCCeEEEEeCCC---------CeEEEEec-CCc
Q 016446 77 STKIEYI-RRGKPDSGFALFESE--SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN---------YTMLYSIS-DKH 143 (389)
Q Consensus 77 ~~~l~~i-~~g~~~~~~~l~~~~--~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~---------g~~l~tl~-~~~ 143 (389)
.+++|++ ..++. ..+ .. +...+..++|+ | +++|++++.|++|++||+.+ ++++.++. ...
T Consensus 80 ~i~~wd~~~~~~~---~~~--~~~~~~~~v~~l~~~-~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 152 (342)
T 1yfq_A 80 EILKVDLIGSPSF---QAL--TNNEANLGICRICKY-G-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNK 152 (342)
T ss_dssp CEEEECSSSSSSE---EEC--BSCCCCSCEEEEEEE-T-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCC
T ss_pred eEEEEEeccCCce---Eec--cccCCCCceEEEEeC-C-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCc
Confidence 8999998 77764 112 23 55567789998 7 99999999999999999987 77666664 578
Q ss_pred EEEEEEcCCceEEEEecCCCCeeEEEEEcCC-CeE--EEEEeecCCceeEEEEEec-CCCeEEEEeCCCcEEEEECCCC-
Q 016446 144 VQEIKISPGIMLLIFNRSSSHVPLKILSIED-GTV--LKVFYHLLHRNKKVDFIEQ-FNEKLLVKQENENLQILDVRNA- 218 (389)
Q Consensus 144 V~~vafS~g~~la~~~~~s~d~tiklWd~~t-G~~--l~tl~~~~~~~~~v~f~~~-~~~~l~~~s~D~tIklWd~~tg- 218 (389)
|.+++|+|+. +++++ .|++|++||+.+ ++. ......|...+..++|+ | ++..+++++.|++|+|||+..+
T Consensus 153 v~~~~~~~~~-l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~~~~l~~~~~dg~i~i~~~~~~~ 227 (342)
T 1yfq_A 153 IFTMDTNSSR-LIVGM---NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL-PKEQEGYACSSIDGRVAVEFFDDQG 227 (342)
T ss_dssp EEEEEECSSE-EEEEE---STTEEEEEESSCCTTCCCEEEECSCSSCEEEEEEC-SGGGCEEEEEETTSEEEEEECCTTC
T ss_pred eEEEEecCCc-EEEEe---CCCeEEEEECCccccccceeeecCCCCceeEEEEC-CCCCCEEEEEecCCcEEEEEEcCCC
Confidence 9999999766 66664 457999999998 654 33444677889999998 6 7899999999999999999987
Q ss_pred -----eEEEEcccCCC---------ceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccC-cCCcCCCCeeEEEE
Q 016446 219 -----ELMEVSRTEFM---------TPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDH-LLWHPDCNTNNIYI 281 (389)
Q Consensus 219 -----~~~~~l~gh~~---------~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh-~~~~~~~~v~sv~f 281 (389)
+++..+.+|.. .|.+++|+|+|++|++++ |++|++||+. ++++.++.+| ..+ |.+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~-----v~~~~- 301 (342)
T 1yfq_A 228 DDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDS-----VVKIA- 301 (342)
T ss_dssp CSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSE-----EEEEE-
T ss_pred cccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCC-----ceEec-
Confidence 88888888866 999999999999999998 9999999997 9999999998 776 78999
Q ss_pred CCCCCEEEEEecC
Q 016446 282 TSDQDLIISYCKA 294 (389)
Q Consensus 282 SpdG~~laS~s~D 294 (389)
|||++||+++.|
T Consensus 302 -~~~~~l~s~s~D 313 (342)
T 1yfq_A 302 -CSDNILCLATSD 313 (342)
T ss_dssp -ECSSEEEEEEEC
T ss_pred -CCCCeEEEEecC
Confidence 999999999876
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-36 Score=291.94 Aligned_cols=259 Identities=8% Similarity=0.006 Sum_probs=202.7
Q ss_pred EeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCC
Q 016446 52 YNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK 131 (389)
Q Consensus 52 ~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~ 131 (389)
+.+|++.|++ ++.| ..+++||+.+|+.. .... ...+..++|+ |+ +++++.|++|++|+..
T Consensus 44 ~~~d~~~l~s----g~~D------g~v~iwd~~~~~~~-----~~~~-~~~v~~~~~~-~~---~~s~s~D~~i~~w~~~ 103 (343)
T 3lrv_A 44 MYYDKWVCMC----RCED------GALHFTQLKDSKTI-----TTIT-TPNPRTGGEH-PA---IISRGPCNRLLLLYPG 103 (343)
T ss_dssp SSEEEEEEEE----EEET------TEEEEEEESSSSCE-----EEEE-EECCCTTCCC-CS---EEEECSTTEEEEEETT
T ss_pred hcCCCCEEEE----ECCC------CcEEEEECCCCcEE-----EEEe-cCCceeeeeC-Cc---eEEecCCCeEEEEEcc
Confidence 4568888888 4566 78899999888762 1111 2345678887 66 8999999999999654
Q ss_pred ---------CCeEEEEec---CCcEEEEEEcC---CceEEEEecCCCCeeEEEEEcCCCeEEEEEe-ecCCceeEEEEEe
Q 016446 132 ---------NYTMLYSIS---DKHVQEIKISP---GIMLLIFNRSSSHVPLKILSIEDGTVLKVFY-HLLHRNKKVDFIE 195 (389)
Q Consensus 132 ---------~g~~l~tl~---~~~V~~vafS~---g~~la~~~~~s~d~tiklWd~~tG~~l~tl~-~~~~~~~~v~f~~ 195 (389)
+++++..+. ...|.+++|+| +.++++++ .|++|++||+++|+++..+. .|...+..++|+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s---~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~- 179 (343)
T 3lrv_A 104 NQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWAD---NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLH- 179 (343)
T ss_dssp TEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEE---TTCCEEEEESSSSCEEEEECCCSSCCCCEEEEC-
T ss_pred CceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEe---CCCcEEEEECCCCcEEEEEecCCCCceEEEEEC-
Confidence 555555443 35799999997 56777664 56899999999999988875 444578999998
Q ss_pred cCCCeEEEEeCCCcEEEEECCCCeEE-EEccc-CCCceEEEEEcCCCcEEEEEcCCeEEEEeCC-CcEEEEecc---CcC
Q 016446 196 QFNEKLLVKQENENLQILDVRNAELM-EVSRT-EFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFED---HLL 269 (389)
Q Consensus 196 ~~~~~l~~~s~D~tIklWd~~tg~~~-~~l~g-h~~~v~sv~fspdg~~laS~sD~tIklWd~~-G~~l~tl~g---h~~ 269 (389)
|++..+++++.|++|+|||+++++++ ..+.+ |...|.+++|+|+|++|++++|++|+|||++ ++++.+++. |..
T Consensus 180 pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~ 259 (343)
T 3lrv_A 180 KDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEF 259 (343)
T ss_dssp TTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC---
T ss_pred CCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccccc
Confidence 78888999999999999999999988 88888 9999999999999999999996699999997 777665554 443
Q ss_pred CcCCCCee--EEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccc
Q 016446 270 WHPDCNTN--NIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLN 347 (389)
Q Consensus 270 ~~~~~~v~--sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~ 347 (389)
. +. +++|+|+|++||+++.+ |++|+||++.+++.....
T Consensus 260 ~-----~~~~~~~~~~~g~~l~~~s~~----------d~~i~v~~~~~~~~~~~~------------------------- 299 (343)
T 3lrv_A 260 K-----TGTVTYDIDDSGKNMIAYSNE----------SNSLTIYKFDKKTKNWTK------------------------- 299 (343)
T ss_dssp -------CCEEEEECTTSSEEEEEETT----------TTEEEEEEECTTTCSEEE-------------------------
T ss_pred c-----ccceEEEECCCCCEEEEecCC----------CCcEEEEEEcccccceEe-------------------------
Confidence 3 33 59999999999998751 489999998765432222
Q ss_pred cccceecccccccCCEEEEEECC---CCCEEEEecCCCcEEEc
Q 016446 348 KSSYIRSTVGEALEDITSLFYDE---ERNEIYTGNRHGLVHVW 387 (389)
Q Consensus 348 ~~~~~~~~~~~~~~~V~svafSp---dg~~LaSgs~D~tIrlW 387 (389)
.++..++|+| +++.|++++.|++++++
T Consensus 300 -------------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 300 -------------DEESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp -------------EEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred -------------cCceeEecCccccccceeEEEecCCceEEE
Confidence 2677899999 99999999999999986
No 120
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3e-35 Score=294.07 Aligned_cols=237 Identities=15% Similarity=0.157 Sum_probs=203.9
Q ss_pred ecccCceeEEEecCC-CeEEEEecCCCeEEEEeCCC----------CeEEEEec--CCcEEEEEEcC-Cc-eEEEEecCC
Q 016446 98 ESLKWPGFVEFDDVN-GKVLTYSAQDSIYKVFDLKN----------YTMLYSIS--DKHVQEIKISP-GI-MLLIFNRSS 162 (389)
Q Consensus 98 ~~~~~~~~v~Fs~pd-G~~Las~s~D~tiklWdl~~----------g~~l~tl~--~~~V~~vafS~-g~-~la~~~~~s 162 (389)
.+.+.|..++|+ |+ +.+||+++.|++|+|||+.+ ++++.++. ...|.+++|+| +. +|+++ +
T Consensus 126 ~h~~~v~~l~~~-p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~---~ 201 (430)
T 2xyi_A 126 NHEGEVNRARYM-PQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA---S 201 (430)
T ss_dssp EESSCCSEEEEE-TTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE---C
T ss_pred cCCCcEEEEEEC-CCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE---e
Confidence 456678889999 75 78999999999999999976 56666664 56899999995 55 78776 4
Q ss_pred CCeeEEEEEcCCCeE-------EEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCC---eEEEEcccCCCceE
Q 016446 163 SHVPLKILSIEDGTV-------LKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNA---ELMEVSRTEFMTPS 232 (389)
Q Consensus 163 ~d~tiklWd~~tG~~-------l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg---~~~~~l~gh~~~v~ 232 (389)
.|++|++||+.++.. ...+.+|...+..++|++.++..+++++.|++|++||++++ +++..+.+|...|+
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 568999999988433 46777899999999998435677888899999999999987 57888889999999
Q ss_pred EEEEcCCCc-EEEEEc-CCeEEEEeCC--CcEEEEeccCcCCcCCCCeeEEEECCCCC-EEEEEecCCCcccccCCCCCe
Q 016446 233 AFIFLYENQ-LFLTFR-NRTVAVWNFR--GELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYCKAEPEDQWMEGSAGS 307 (389)
Q Consensus 233 sv~fspdg~-~laS~s-D~tIklWd~~--G~~l~tl~gh~~~~~~~~v~sv~fSpdG~-~laS~s~D~~~~~~~~s~D~t 307 (389)
+++|+|+++ +|++++ |++|++||++ ++++.++.+|... |.+++|+|+|+ +||+++.| ++
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~-----v~~i~~sp~~~~~l~s~~~d-----------~~ 345 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE-----IFQVQWSPHNETILASSGTD-----------RR 345 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSC-----EEEEEECSSCTTEEEEEETT-----------SC
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCC-----EEEEEECCCCCCEEEEEeCC-----------Cc
Confidence 999999998 788998 9999999995 5789999999877 89999999995 68888764 89
Q ss_pred EEEEeCCC--------------CeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCC
Q 016446 308 INVSSILT--------------GKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERN 373 (389)
Q Consensus 308 IklWd~~t--------------g~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~ 373 (389)
|+|||+.+ .+++..+.+|. ..|++++|+|+++
T Consensus 346 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~----------------------------------~~v~~~~~~p~~~ 391 (430)
T 2xyi_A 346 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT----------------------------------AKISDFSWNPNEP 391 (430)
T ss_dssp CEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCS----------------------------------SCEEEEEECSSST
T ss_pred EEEEeCCCCccccCccccccCCcceEEEcCCCC----------------------------------CCceEEEECCCCC
Confidence 99999987 37788888887 5899999999999
Q ss_pred -EEEEecCCCcEEEcc
Q 016446 374 -EIYTGNRHGLVHVWS 388 (389)
Q Consensus 374 -~LaSgs~D~tIrlW~ 388 (389)
+|||++.|++|++|+
T Consensus 392 ~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 392 WIICSVSEDNIMQVWQ 407 (430)
T ss_dssp TEEEEEETTSEEEEEE
T ss_pred CEEEEEECCCCEEEeE
Confidence 999999999999997
No 121
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-35 Score=294.30 Aligned_cols=250 Identities=10% Similarity=0.076 Sum_probs=201.3
Q ss_pred eeEEEecCCCeEEEEecCCCeEEEEeCCCCe---EEEEecC--C------------------------------------
Q 016446 104 GFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT---MLYSISD--K------------------------------------ 142 (389)
Q Consensus 104 ~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~---~l~tl~~--~------------------------------------ 142 (389)
..|+|+ |||++|+++ .+++|++||+.+|+ ++.++.. .
T Consensus 8 ~~v~~s-~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (450)
T 2vdu_B 8 QNLLTS-RDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIK 85 (450)
T ss_dssp CEEEEC-SSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-------------------------------------
T ss_pred EEEEec-CCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcccc
Confidence 469998 899977765 57899999999999 6665541 1
Q ss_pred ------------------cEEEEEEc-CCceE-EEEecCCCCeeEEEEEcC--CCeEEEEEe--ecCCceeEEEEEecCC
Q 016446 143 ------------------HVQEIKIS-PGIML-LIFNRSSSHVPLKILSIE--DGTVLKVFY--HLLHRNKKVDFIEQFN 198 (389)
Q Consensus 143 ------------------~V~~vafS-~g~~l-a~~~~~s~d~tiklWd~~--tG~~l~tl~--~~~~~~~~v~f~~~~~ 198 (389)
.|++++|| +|.+| |++ +.|++|+|||+. +|++++++. .|...+..++|+ |++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~---~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s-p~~ 161 (450)
T 2vdu_B 86 RTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACA---DSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIA-EDD 161 (450)
T ss_dssp --------------CCCCCEEEEEECTTSSEEEEEE---GGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEEC-TTS
T ss_pred ccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEE---CCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEc-CCC
Confidence 59999999 57776 554 346899999999 999999997 456778999998 788
Q ss_pred CeEEEEeCCCcEEEEECCCCeEEE----EcccCCCceEEEEEcCC---CcEEEEEc-CCeEEEEeCC-CcEEEE-eccCc
Q 016446 199 EKLLVKQENENLQILDVRNAELME----VSRTEFMTPSAFIFLYE---NQLFLTFR-NRTVAVWNFR-GELVTS-FEDHL 268 (389)
Q Consensus 199 ~~l~~~s~D~tIklWd~~tg~~~~----~l~gh~~~v~sv~fspd---g~~laS~s-D~tIklWd~~-G~~l~t-l~gh~ 268 (389)
..|++++.|++|++|++.++++.. .+.+|...|.+++|+|+ +++|++++ |++|++||+. ++++.+ +.+|.
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~ 241 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK 241 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC
Confidence 899999999999999999988655 88999999999999999 99999999 9999999997 888887 66998
Q ss_pred CCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCccccc---CCCCCCCccc
Q 016446 269 LWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDEL---GSSSTGKSKK 345 (389)
Q Consensus 269 ~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~---~~~~~~~~~~ 345 (389)
.+ |.+++|+ ||++|++++.| ++|+|||+.+|+++.++..|... ...... ++...
T Consensus 242 ~~-----v~~~~~s-d~~~l~s~~~d-----------~~v~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----- 298 (450)
T 2vdu_B 242 HF-----VSSICCG-KDYLLLSAGGD-----------DKIFAWDWKTGKNLSTFDYNSLI-KPYLNDQHLAPPRF----- 298 (450)
T ss_dssp SC-----EEEEEEC-STTEEEEEESS-----------SEEEEEETTTCCEEEEEECHHHH-GGGCCTTSBC---------
T ss_pred Cc-----eEEEEEC-CCCEEEEEeCC-----------CeEEEEECCCCcEeeeecchhhh-hhhhhhcccccccc-----
Confidence 77 8999999 99999999865 99999999999999999865310 000000 00000
Q ss_pred cccccceecccccccCCEEEEEECCCCCEEEEec-CCCcEEEcc
Q 016446 346 LNKSSYIRSTVGEALEDITSLFYDEERNEIYTGN-RHGLVHVWS 388 (389)
Q Consensus 346 ~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs-~D~tIrlW~ 388 (389)
...........|.+++|+|||++|++++ .|++|+||+
T Consensus 299 ------~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 299 ------QNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILE 336 (450)
T ss_dssp ------------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEE
T ss_pred ------cccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 0000001124799999999999999999 999999997
No 122
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.3e-35 Score=294.13 Aligned_cols=237 Identities=8% Similarity=-0.022 Sum_probs=168.4
Q ss_pred eEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe-eecccCceeEEEecC--------CCeEE
Q 016446 46 VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFVEFDDV--------NGKVL 116 (389)
Q Consensus 46 ~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~p--------dG~~L 116 (389)
.+...+++|++..|++ ++.| ++++||++..++......+-. ..|.+.|.+|+|+ | ||++|
T Consensus 91 ~~~~~~~~~~~~~las----~~~d------~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~-p~~~~~~~~d~~~l 159 (393)
T 4gq1_A 91 DGNVNSSPVYSLFLAC----VCQD------NTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIA-DVYSADNRLAEQVI 159 (393)
T ss_dssp ------CCEEEEEEEE----EETT------SCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEE-EEECTTCSEEEEEE
T ss_pred CcceeecCCCCCEEEE----EeCC------CcEEEEECCCCccceeeeecccCCCCCceEEEEEc-cccccccCCCCCEE
Confidence 3445566777888888 4577 899999998886522111111 2466678899998 5 89999
Q ss_pred EEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEcC-Cc-eEEEEecCCCCeeEEEEEcCCCeEEEEE-----------
Q 016446 117 TYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP-GI-MLLIFNRSSSHVPLKILSIEDGTVLKVF----------- 181 (389)
Q Consensus 117 as~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS~-g~-~la~~~~~s~d~tiklWd~~tG~~l~tl----------- 181 (389)
||||.|+||||||+.++.++..+. ...|.+|+|+| +. +|+++ +.|++|||||+.++++..++
T Consensus 160 as~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~---~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~ 236 (393)
T 4gq1_A 160 ASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVG---ERNGNIRIFDWTLNLSAEENSQTELVKNPWL 236 (393)
T ss_dssp EEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEE---ETTSEEEEEETTCCC----------CSCCCS
T ss_pred EEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEec---CCCCEEEEEECCCCcccccccccCCcccceE
Confidence 999999999999998888765553 57899999996 43 67766 45689999999999876554
Q ss_pred --------------eecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcC---------
Q 016446 182 --------------YHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLY--------- 238 (389)
Q Consensus 182 --------------~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fsp--------- 238 (389)
.+|...+..|.|..+++.++++++.|++|++||+.+++....+.+|...+..+.|+|
T Consensus 237 ~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
T 4gq1_A 237 LTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFP 316 (393)
T ss_dssp EEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSC
T ss_pred EecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccC
Confidence 356677889999988899999999999999999999999888888888888777665
Q ss_pred -----------CCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCC
Q 016446 239 -----------ENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSA 305 (389)
Q Consensus 239 -----------dg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D 305 (389)
++.++++++ |++|+|||++ |+++.++.+|..+ |++|+|||||++||+++.
T Consensus 317 ~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~-----V~svafspdG~~LA~as~------------ 379 (393)
T 4gq1_A 317 SLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMP-----IVDFCWHQDGSHLAIATE------------ 379 (393)
T ss_dssp CSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSC-----EEEEEECTTSSEEEEEES------------
T ss_pred cceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCc-----EEEEEEcCCCCEEEEEeC------------
Confidence 445778888 9999999997 9999888889876 899999999999999975
Q ss_pred CeEEEEeC
Q 016446 306 GSINVSSI 313 (389)
Q Consensus 306 ~tIklWd~ 313 (389)
+.+.||.+
T Consensus 380 ~Gv~lvrL 387 (393)
T 4gq1_A 380 GSVLLTRL 387 (393)
T ss_dssp SEEEEEEE
T ss_pred CCeEEEEE
Confidence 35767764
No 123
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-35 Score=317.95 Aligned_cols=237 Identities=14% Similarity=0.218 Sum_probs=204.6
Q ss_pred ecccCceeEEEecCCCeEEEEecCCCeEEEEeCC--CCeEEEEec--CCcEEEEEEc-C--CceEEEEecCCCCeeEEEE
Q 016446 98 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK--NYTMLYSIS--DKHVQEIKIS-P--GIMLLIFNRSSSHVPLKIL 170 (389)
Q Consensus 98 ~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~--~g~~l~tl~--~~~V~~vafS-~--g~~la~~~~~s~d~tiklW 170 (389)
.|.+.+.+++|+ |||++||+|+.||+|+|||+. +++++.++. ...|.+++|+ + +.+|++++ .|++|++|
T Consensus 7 gH~~~V~~l~~s-~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s---~Dg~I~vw 82 (753)
T 3jro_A 7 AHNELIHDAVLD-YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS---YDGKVLIW 82 (753)
T ss_dssp -CCCCEEEECCC-SSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEE---TTSCEEEE
T ss_pred cCcceeEEEEEC-CCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEe---CCCeEEEE
Confidence 355667889998 899999999999999999998 456777775 4689999999 5 88998874 45899999
Q ss_pred EcCCCe--EEEEEeecCCceeEEEEEecC--CCeEEEEeCCCcEEEEECCCCe--EEEEcccCCCceEEEEEcC------
Q 016446 171 SIEDGT--VLKVFYHLLHRNKKVDFIEQF--NEKLLVKQENENLQILDVRNAE--LMEVSRTEFMTPSAFIFLY------ 238 (389)
Q Consensus 171 d~~tG~--~l~tl~~~~~~~~~v~f~~~~--~~~l~~~s~D~tIklWd~~tg~--~~~~l~gh~~~v~sv~fsp------ 238 (389)
|+.+|+ ++..+.+|...+..++|+ |+ +..+++++.|++|++||+.++. ....+.+|...|.+++|+|
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~s-p~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWA-PHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEEC-CGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC----
T ss_pred ECCCCcccccccccCCCCCeEEEEEC-CCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccc
Confidence 999998 888888999999999998 66 7889999999999999999883 4556789999999999999
Q ss_pred -------CCcEEEEEc-CCeEEEEeCC-C----cEEEEeccCcCCcCCCCeeEEEECCC---CCEEEEEecCCCcccccC
Q 016446 239 -------ENQLFLTFR-NRTVAVWNFR-G----ELVTSFEDHLLWHPDCNTNNIYITSD---QDLIISYCKAEPEDQWME 302 (389)
Q Consensus 239 -------dg~~laS~s-D~tIklWd~~-G----~~l~tl~gh~~~~~~~~v~sv~fSpd---G~~laS~s~D~~~~~~~~ 302 (389)
++++|++++ ||+|++||+. + +++.++.+|..+ |.+++|+|+ |++|++++.|
T Consensus 162 ~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~-----V~~l~~sp~~~~~~~l~s~s~D-------- 228 (753)
T 3jro_A 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW-----VRDVAWSPTVLLRSYLASVSQD-------- 228 (753)
T ss_dssp -----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC-----EEEEEECCCCSSSEEEEEEESS--------
T ss_pred cccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc-----EEEEEeccCCCCCCEEEEEecC--------
Confidence 699999998 9999999985 5 677899999887 899999999 9999999875
Q ss_pred CCCCeEEEEeCCCCe-----EEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEE
Q 016446 303 GSAGSINVSSILTGK-----CLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYT 377 (389)
Q Consensus 303 s~D~tIklWd~~tg~-----~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaS 377 (389)
|+|++||+.+++ .+....+|. ..|++++|+|||+.|++
T Consensus 229 ---g~I~iwd~~~~~~~~~~~~~~~~~~~----------------------------------~~v~~l~~spdg~~l~s 271 (753)
T 3jro_A 229 ---RTCIIWTQDNEQGPWKKTLLKEEKFP----------------------------------DVLWRASWSLSGNVLAL 271 (753)
T ss_dssp ---SCEEEEEESSSSSCCBCCBSSSSCCS----------------------------------SCCCCEEECTTTCCEEE
T ss_pred ---CEEEEecCCCCCCcceeEEeccCCCC----------------------------------CceEEEEEcCCCCEEEE
Confidence 999999998875 222223343 58999999999999999
Q ss_pred ecCCCcEEEccC
Q 016446 378 GNRHGLVHVWSN 389 (389)
Q Consensus 378 gs~D~tIrlW~~ 389 (389)
|+.||+|++|+.
T Consensus 272 ~s~Dg~I~vwd~ 283 (753)
T 3jro_A 272 SGGDNKVTLWKE 283 (753)
T ss_dssp ECSSSCEECCBC
T ss_pred EcCCCEEEEEec
Confidence 999999999984
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=2.7e-33 Score=275.61 Aligned_cols=273 Identities=10% Similarity=0.071 Sum_probs=223.8
Q ss_pred EEEEEee--ccEEEEEecCceEEEEecccceeee-----eeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeee
Q 016446 6 VIEIVAA--RDIVFALAHSGVCAAFSRETNRRIC-----FLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRST 78 (389)
Q Consensus 6 v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~-----tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~ 78 (389)
+..+.|+ +.++++++.+++|++||..+|++++ .+.+| ...|++++|+|+|+.+++ ++.| ..+
T Consensus 125 ~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~s----~~~d------~~v 193 (433)
T 3bws_A 125 PKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKK-LGFVETISIPEHNELWVS----QMQA------NAV 193 (433)
T ss_dssp BCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTT-CCEEEEEEEGGGTEEEEE----EGGG------TEE
T ss_pred ceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCccccccc-CCceeEEEEcCCCEEEEE----ECCC------CEE
Confidence 4456666 6778888889999999999999988 44455 489999999999998888 4566 789
Q ss_pred eEeEeccCCCCCcceeEe-eecccCceeEEEecCCCeEE-EEecCCCeEEEEeCCCCeEEEEec-CCcEEEEEEc-CCce
Q 016446 79 KIEYIRRGKPDSGFALFE-SESLKWPGFVEFDDVNGKVL-TYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKIS-PGIM 154 (389)
Q Consensus 79 ~l~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~pdG~~L-as~s~D~tiklWdl~~g~~l~tl~-~~~V~~vafS-~g~~ 154 (389)
++|++.+++. +.. ..+...+..++|+ |+|++| ++++.|++|++||+.+++++..+. ...+.+++|+ +|.+
T Consensus 194 ~~~d~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~ 267 (433)
T 3bws_A 194 HVFDLKTLAY-----KATVDLTGKWSKILLYD-PIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKE 267 (433)
T ss_dssp EEEETTTCCE-----EEEEECSSSSEEEEEEE-TTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSE
T ss_pred EEEECCCceE-----EEEEcCCCCCeeEEEEc-CCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCE
Confidence 9999988875 222 1344567789998 899877 566689999999999999988887 4679999999 5778
Q ss_pred EEEEecCC-----CCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEE-EeCCCcEEEEECCCCeEEEEcccCC
Q 016446 155 LLIFNRSS-----SHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLV-KQENENLQILDVRNAELMEVSRTEF 228 (389)
Q Consensus 155 la~~~~~s-----~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~-~s~D~tIklWd~~tg~~~~~l~gh~ 228 (389)
|++++... .|++|++||+.+|+++..+. |...+..++|+ |++..+++ ++.|++|++||++++++++.+. |.
T Consensus 268 l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~-~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~ 344 (433)
T 3bws_A 268 LYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSG-NTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VF 344 (433)
T ss_dssp EEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEEC-SSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CS
T ss_pred EEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEEC-CCCCEEEEEecCCCEEEEEECCCCcEEEEec-CC
Confidence 88775433 47899999999999988875 44678899997 67766655 5799999999999999988876 66
Q ss_pred CceEEEEEcCCCcEEEEEc-C---------------CeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEE
Q 016446 229 MTPSAFIFLYENQLFLTFR-N---------------RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISY 291 (389)
Q Consensus 229 ~~v~sv~fspdg~~laS~s-D---------------~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~ 291 (389)
..+.+++|+|||++|++++ + |+|++||+. ++++..+.++.. +.+++|+|||++|+++
T Consensus 345 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 345 DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQ------PTGLDVSPDNRYLVIS 418 (433)
T ss_dssp SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSS------EEEEEECTTSCEEEEE
T ss_pred CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCC------CceEEEcCCCCEEEEE
Confidence 7899999999999888775 3 599999996 999999987542 6899999999999987
Q ss_pred ecCCCcccccCCCCCeEEEEeCC
Q 016446 292 CKAEPEDQWMEGSAGSINVSSIL 314 (389)
Q Consensus 292 s~D~~~~~~~~s~D~tIklWd~~ 314 (389)
+.+ |++|++|++.
T Consensus 419 ~~~----------d~~i~v~~~~ 431 (433)
T 3bws_A 419 DFL----------DHQIRVYRRD 431 (433)
T ss_dssp ETT----------TTEEEEEEET
T ss_pred ECC----------CCeEEEEEec
Confidence 642 5999999975
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.6e-34 Score=286.98 Aligned_cols=209 Identities=12% Similarity=0.089 Sum_probs=158.7
Q ss_pred ceEEEEEEeeC----CCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEec
Q 016446 45 EVIRSLFYNKN----NDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA 120 (389)
Q Consensus 45 ~~v~sv~~spd----g~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s 120 (389)
..|++|+|||| ++++++++ +.+++|+ + |+|+++.+++
T Consensus 112 ~~v~sla~spd~~~~~~~l~s~g------------~~~~v~~-----------------------l----~~g~lv~ss~ 152 (356)
T 2w18_A 112 REIRALFCSSDDESEKQVLLKSG------------NIKAVLG-----------------------L----TKRRLVSSSG 152 (356)
T ss_dssp EEEEEECC------CCEEEEEEE------------EEEEEEE-----------------------E----TTTEEEEEES
T ss_pred cceEEEEECCCccccccEEEeCC------------CeEEEEe-----------------------c----CCCcEEEecc
Confidence 47999999999 99988832 2233332 2 4677777744
Q ss_pred --CCCeEEEEeC-CCCeEEEE--ecCCcEEEEEEcC----CceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCC---ce
Q 016446 121 --QDSIYKVFDL-KNYTMLYS--ISDKHVQEIKISP----GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLH---RN 188 (389)
Q Consensus 121 --~D~tiklWdl-~~g~~l~t--l~~~~V~~vafS~----g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~---~~ 188 (389)
.|++||+|++ .+|+.+.+ ++...|..++||+ +..||++ +.|+||||||++||+++++|.+|.. .+
T Consensus 153 ~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSg---S~D~TIkIWDl~TGk~l~tL~g~~~~v~~v 229 (356)
T 2w18_A 153 TLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGT---TIMNNIVIWNLKTGQLLKKMHIDDSYQASV 229 (356)
T ss_dssp SSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEE---ETTSEEEEEETTTCCEEEEEECCC---CCC
T ss_pred cCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEe---cCCCcEEEEECCCCcEEEEEcCCCcceeee
Confidence 7999999999 56887755 5566666777763 4788776 4568999999999999999986543 45
Q ss_pred eEEEEEecCCCeE------------EEEeCCCcEEEEECCCCeEEEEc-----ccCCCceEEEEEcCCCcEEEEEc-CCe
Q 016446 189 KKVDFIEQFNEKL------------LVKQENENLQILDVRNAELMEVS-----RTEFMTPSAFIFLYENQLFLTFR-NRT 250 (389)
Q Consensus 189 ~~v~f~~~~~~~l------------~~~s~D~tIklWd~~tg~~~~~l-----~gh~~~v~sv~fspdg~~laS~s-D~t 250 (389)
..++|+ |++..+ ++++.|+|||+||+.+|+++.++ .||...+.+..++ +.++|+++ |+|
T Consensus 230 ~~vafS-pdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgT 306 (356)
T 2w18_A 230 CHKAYS-EMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGT 306 (356)
T ss_dssp EEEEEE-ETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSC
T ss_pred EEEEEC-CCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCc
Confidence 667898 667665 45779999999999999998876 5887765555554 88999999 999
Q ss_pred EEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeC
Q 016446 251 VAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSI 313 (389)
Q Consensus 251 IklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~ 313 (389)
|||||+. |+++++|++|...+ +..|+|||||++|||||.| +||||||+
T Consensus 307 IkIWDl~tGk~l~tL~gH~~~v----vs~vafSPDG~~LaSGS~D-----------~TIklWd~ 355 (356)
T 2w18_A 307 IAIWDLLLGQCTALLPPVSDQH----WSFVKWSGTDSHLLAGQKD-----------GNIFVYHY 355 (356)
T ss_dssp EEEEETTTCSEEEEECCC--CC----CCEEEECSSSSEEEEECTT-----------SCEEEEEE
T ss_pred EEEEECCCCcEEEEecCCCCCe----EEEEEECCCCCEEEEEECC-----------CcEEEecC
Confidence 9999997 99999999998763 4569999999999999765 99999995
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=100.00 E-value=1e-32 Score=276.53 Aligned_cols=296 Identities=11% Similarity=0.090 Sum_probs=231.4
Q ss_pred cEEEEEe----cCc----eEEEEec--ccceee--eeeecCCcceEEEEEEee--------------CCCEEEEEEEeec
Q 016446 14 DIVFALA----HSG----VCAAFSR--ETNRRI--CFLNVSPDEVIRSLFYNK--------------NNDSLITVSVYAS 67 (389)
Q Consensus 14 ~~~a~~~----~~g----tiklW~~--~tg~~l--~tl~~~~~~~v~sv~~sp--------------dg~~l~s~s~~~~ 67 (389)
+.+++++ .+| +++|||. .+|+++ .++.++. ..++.+++++ ++..|+.++...+
T Consensus 76 ~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~ 154 (415)
T 2hqs_A 76 DAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNK-QWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNG 154 (415)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECG-GGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSS
T ss_pred CEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcCh-hHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCC
Confidence 4566665 567 9999999 999998 5588875 7889988886 3778888776432
Q ss_pred CCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCC---eEEEEeCCCCeEEEEe-cCCc
Q 016446 68 DNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDS---IYKVFDLKNYTMLYSI-SDKH 143 (389)
Q Consensus 68 ~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~---tiklWdl~~g~~l~tl-~~~~ 143 (389)
++ ...++++||+..++. +.+.. +...+.+++|| |||+.||+++.|+ +|++||+.+|++.... +...
T Consensus 155 ~~----~~~~i~i~d~~g~~~---~~l~~--~~~~v~~~~~S-pdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~ 224 (415)
T 2hqs_A 155 GQ----FPYELRVSDYDGYNQ---FVVHR--SPQPLMSPAWS-PDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRH 224 (415)
T ss_dssp SS----CCEEEEEEETTSCSC---EEEEE--ESSCEEEEEEC-TTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSC
T ss_pred CC----ccceEEEEcCCCCCC---EEEeC--CCCcceeeEEc-CCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCc
Confidence 21 015888999764332 33432 44567789998 9999999999886 9999999999976433 3568
Q ss_pred EEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeC-CC--cEEEEECCCCe
Q 016446 144 VQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQE-NE--NLQILDVRNAE 219 (389)
Q Consensus 144 V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~-D~--tIklWd~~tg~ 219 (389)
+.+++|| +|++||.+.....+..|++||+.+|++ ..+..|...+..++|+ |++..|++++. ++ .|.+||+.+++
T Consensus 225 ~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~s-pdg~~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 225 NGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWF-PDSQNLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEEC-TTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred ccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEEC-CCCCEEEEEECCCCCcEEEEEECCCCC
Confidence 9999999 588888554444456799999999887 5677787889999998 78888998875 55 67777999888
Q ss_pred EEEEcccCCCceEEEEEcCCCcEEEEEc-C---CeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecC
Q 016446 220 LMEVSRTEFMTPSAFIFLYENQLFLTFR-N---RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKA 294 (389)
Q Consensus 220 ~~~~l~gh~~~v~sv~fspdg~~laS~s-D---~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D 294 (389)
+. .+..|...+.+++|+|||++|++++ + .+|++||++ |++ +.+..|. . +.+++|||||++|++++.|
T Consensus 303 ~~-~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~-----~~~~~~spdg~~l~~~s~~ 374 (415)
T 2hqs_A 303 PQ-RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-L-----DETPSLAPNGTMVIYSSSQ 374 (415)
T ss_dssp CE-ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-S-----CEEEEECTTSSEEEEEEEE
T ss_pred EE-EEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-C-----cCCeEEcCCCCEEEEEEcC
Confidence 64 4566778899999999999999886 4 599999997 666 5677664 3 6899999999999999876
Q ss_pred CCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCC
Q 016446 295 EPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERN 373 (389)
Q Consensus 295 ~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~ 373 (389)
. ....|++||+. |+++..|.+|. ..|++++|||.-+
T Consensus 375 ~--------~~~~l~~~d~~-g~~~~~l~~~~----------------------------------~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 375 G--------MGSVLNLVSTD-GRFKARLPATD----------------------------------GQVKFPAWSPYLH 410 (415)
T ss_dssp T--------TEEEEEEEETT-SCCEEECCCSS----------------------------------SEEEEEEECCCCC
T ss_pred C--------CccEEEEEECC-CCcEEEeeCCC----------------------------------CCCcCCccccccc
Confidence 1 11289999976 78889999998 5899999999865
No 127
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-34 Score=307.76 Aligned_cols=247 Identities=11% Similarity=0.070 Sum_probs=199.7
Q ss_pred eeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe-eecccCceeEEEecCC--C
Q 016446 37 CFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFVEFDDVN--G 113 (389)
Q Consensus 37 ~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~pd--G 113 (389)
.++.+|. +.|.+++|+|+|+.|++ ++.| ..++||++..+.. ..+.. ..+...+.+++|+ |+ |
T Consensus 3 ~~l~gH~-~~V~~l~~s~dg~~lat----g~~d------g~I~vwd~~~~~~---~~~~~l~~h~~~V~~l~~s-~~~~~ 67 (753)
T 3jro_A 3 VIANAHN-ELIHDAVLDYYGKRLAT----CSSD------KTIKIFEVEGETH---KLIDTLTGHEGPVWRVDWA-HPKFG 67 (753)
T ss_dssp -----CC-CCEEEECCCSSSCCEEE----EETT------TEEEEEEEETTEE---EEEEEECCCSSCEEEEEEC-CTTSC
T ss_pred eecccCc-ceeEEEEECCCCCeEEE----EECC------CcEEEEecCCCCC---ccceeccCCcCceEEEEec-CCCCC
Confidence 4567764 89999999999999999 4577 7899999874332 11221 2355667889998 66 9
Q ss_pred eEEEEecCCCeEEEEeCCCCe--EEEEec--CCcEEEEEEcC---CceEEEEecCCCCeeEEEEEcCCCe--EEEEEeec
Q 016446 114 KVLTYSAQDSIYKVFDLKNYT--MLYSIS--DKHVQEIKISP---GIMLLIFNRSSSHVPLKILSIEDGT--VLKVFYHL 184 (389)
Q Consensus 114 ~~Las~s~D~tiklWdl~~g~--~l~tl~--~~~V~~vafS~---g~~la~~~~~s~d~tiklWd~~tG~--~l~tl~~~ 184 (389)
++|++|+.|++|++||+.+++ ++..+. ...|.+++|+| +..+++++ .|++|++||+.++. ....+.+|
T Consensus 68 ~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs---~dg~I~vwdl~~~~~~~~~~~~~~ 144 (753)
T 3jro_A 68 TILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS---SDGKVSVVEFKENGTTSPIIIDAH 144 (753)
T ss_dssp SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE---TTSEEEEEECCSSSCCCCEEEECC
T ss_pred CEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEe---CCCcEEEEEeecCCCcceeEeecC
Confidence 999999999999999999987 556654 57899999995 78888874 45899999999883 45567788
Q ss_pred CCceeEEEEEec------------CCCeEEEEeCCCcEEEEECCCC----eEEEEcccCCCceEEEEEcCC---CcEEEE
Q 016446 185 LHRNKKVDFIEQ------------FNEKLLVKQENENLQILDVRNA----ELMEVSRTEFMTPSAFIFLYE---NQLFLT 245 (389)
Q Consensus 185 ~~~~~~v~f~~~------------~~~~l~~~s~D~tIklWd~~tg----~~~~~l~gh~~~v~sv~fspd---g~~laS 245 (389)
...+..++|++. ++..+++++.|++|++||++++ .+..++.+|...|.+++|+|+ |++|++
T Consensus 145 ~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s 224 (753)
T 3jro_A 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS 224 (753)
T ss_dssp SSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred CCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEE
Confidence 899999999843 5789999999999999999987 678889999999999999999 999999
Q ss_pred Ec-CCeEEEEeCC-Cc-----EEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCe
Q 016446 246 FR-NRTVAVWNFR-GE-----LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK 317 (389)
Q Consensus 246 ~s-D~tIklWd~~-G~-----~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~ 317 (389)
++ |++|++||+. ++ .+....+|... |++++|+|||++|++|+. ||+|++||+.++.
T Consensus 225 ~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~-----v~~l~~spdg~~l~s~s~-----------Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 225 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV-----LWRASWSLSGNVLALSGG-----------DNKVTLWKENLEG 287 (753)
T ss_dssp EESSSCEEEEEESSSSSCCBCCBSSSSCCSSC-----CCCEEECTTTCCEEEECS-----------SSCEECCBCCSSS
T ss_pred EecCCEEEEecCCCCCCcceeEEeccCCCCCc-----eEEEEEcCCCCEEEEEcC-----------CCEEEEEecCCCC
Confidence 99 9999999996 53 33334456655 799999999999999876 4999999998654
No 128
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=3.5e-33 Score=294.99 Aligned_cols=314 Identities=7% Similarity=0.055 Sum_probs=242.7
Q ss_pred ccEEEEEee--ccEEEEEec-Cc-----eEEEEecccceeeeeeecCCc-----------------------ceEEEEEE
Q 016446 4 TKVIEIVAA--RDIVFALAH-SG-----VCAAFSRETNRRICFLNVSPD-----------------------EVIRSLFY 52 (389)
Q Consensus 4 ~~v~~i~~~--~~~~a~~~~-~g-----tiklW~~~tg~~l~tl~~~~~-----------------------~~v~sv~~ 52 (389)
..|..+.|+ |++||+++. |+ +|++||.++|++...+..+.. ..|.+++|
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 468899999 999999998 88 999999999988777765421 23789999
Q ss_pred eeCCCEEEEEEEeecCCCcceeeeeeeEeEeccC---CCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEe
Q 016446 53 NKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRG---KPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFD 129 (389)
Q Consensus 53 spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g---~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWd 129 (389)
||||+.|++++ . .++++|++..| ++ ..+. .+...+..++|| |||++||+++ +++|++||
T Consensus 117 SpDg~~l~~~~----~-------~~i~~~d~~~~~~~~~---~~l~--~~~~~~~~~~~S-PDG~~la~~~-~~~i~~~d 178 (741)
T 2ecf_A 117 SPDAQRLLFPL----G-------GELYLYDLKQEGKAAV---RQLT--HGEGFATDAKLS-PKGGFVSFIR-GRNLWVID 178 (741)
T ss_dssp CTTSSEEEEEE----T-------TEEEEEESSSCSTTSC---CBCC--CSSSCEEEEEEC-TTSSEEEEEE-TTEEEEEE
T ss_pred CCCCCEEEEEe----C-------CcEEEEECCCCCcceE---EEcc--cCCcccccccCC-CCCCEEEEEe-CCcEEEEe
Confidence 99999999964 2 57889999888 54 2232 233456789998 9999999987 56999999
Q ss_pred CCCCeEEEEecC--Cc----------------EEEEEEc-CCceEEEEecCC----------------------------
Q 016446 130 LKNYTMLYSISD--KH----------------VQEIKIS-PGIMLLIFNRSS---------------------------- 162 (389)
Q Consensus 130 l~~g~~l~tl~~--~~----------------V~~vafS-~g~~la~~~~~s---------------------------- 162 (389)
+.++++...... .. +.+++|| ||++||+++.+.
T Consensus 179 ~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 258 (741)
T 2ecf_A 179 LASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGD 258 (741)
T ss_dssp TTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTS
T ss_pred cCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCC
Confidence 999887654432 22 4789999 688898875443
Q ss_pred --CCeeEEEEEcCC-CeEEEEEe--ecCCceeEEEEEecCCCeEEEEe-----CCCcEEEEECCCCeEEEEcccCCC---
Q 016446 163 --SHVPLKILSIED-GTVLKVFY--HLLHRNKKVDFIEQFNEKLLVKQ-----ENENLQILDVRNAELMEVSRTEFM--- 229 (389)
Q Consensus 163 --~d~tiklWd~~t-G~~l~tl~--~~~~~~~~v~f~~~~~~~l~~~s-----~D~tIklWd~~tg~~~~~l~gh~~--- 229 (389)
...+|++||+.+ |++..... .|...+..++| |++..|++.+ .+.+|++||+++|++..++.+|..
T Consensus 259 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~ 336 (741)
T 2ecf_A 259 ANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW--RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWV 336 (741)
T ss_dssp CCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE--EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCC
T ss_pred CCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe--CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcC
Confidence 112889999999 98766543 36677899999 6888888764 368899999999999888877654
Q ss_pred -ceEEEEEcCCCcEEEEEc-CCeEEEEeC--CCcEEEEeccCcCCcCCCCeeEE-EECCCCCEEEEEecCCCcccccCCC
Q 016446 230 -TPSAFIFLYENQLFLTFR-NRTVAVWNF--RGELVTSFEDHLLWHPDCNTNNI-YITSDQDLIISYCKAEPEDQWMEGS 304 (389)
Q Consensus 230 -~v~sv~fspdg~~laS~s-D~tIklWd~--~G~~l~tl~gh~~~~~~~~v~sv-~fSpdG~~laS~s~D~~~~~~~~s~ 304 (389)
.+..++|+|||+++++++ |++++||.+ +|+ ++.|.+|... |.++ +|||||++|+..+.+
T Consensus 337 ~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~-----v~~~~~~s~dg~~l~~~~~~---------- 400 (741)
T 2ecf_A 337 PLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWS-----VDELLAVDEKAGLAYFRAGI---------- 400 (741)
T ss_dssp CCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSC-----EEEEEEEETTTTEEEEEECS----------
T ss_pred CcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceE-----EEeEeEEeCCCCEEEEEEeC----------
Confidence 456899999999999988 998888876 477 8889888654 6777 599999988655433
Q ss_pred CC--eEEEEeCCC-CeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCC
Q 016446 305 AG--SINVSSILT-GKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRH 381 (389)
Q Consensus 305 D~--tIklWd~~t-g~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D 381 (389)
|+ +++||++.. |++++.|.+ . ..+.+++|||||+.||....+
T Consensus 401 ~~~~~~~l~~~~~~g~~~~~l~~-~----------------------------------~~~~~~~~spdg~~l~~~~~~ 445 (741)
T 2ecf_A 401 ESARESQIYAVPLQGGQPQRLSK-A----------------------------------PGMHSASFARNASVYVDSWSN 445 (741)
T ss_dssp SCTTCBEEEEEETTCCCCEECCC-S----------------------------------CSEEEEEECTTSSEEEEEEEE
T ss_pred CCCceEEEEEEEcCCCCeeeccc-C----------------------------------CCceEEEECCCCCEEEEEecC
Confidence 34 899999864 777777766 3 378999999999998876544
Q ss_pred ----CcEEEcc
Q 016446 382 ----GLVHVWS 388 (389)
Q Consensus 382 ----~tIrlW~ 388 (389)
..+.+|+
T Consensus 446 ~~~p~~~~l~~ 456 (741)
T 2ecf_A 446 NSTPPQIELFR 456 (741)
T ss_dssp TTEEEEEEEEE
T ss_pred CCCCCeEEEEE
Confidence 3455554
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=100.00 E-value=1.5e-31 Score=278.86 Aligned_cols=295 Identities=7% Similarity=-0.017 Sum_probs=230.1
Q ss_pred EEEEEee--ccEEEEEecCceEEEEec--ccceeeeeeecCCcceEEEEEEee----CCCEEEEEEEeecCCCcceeeee
Q 016446 6 VIEIVAA--RDIVFALAHSGVCAAFSR--ETNRRICFLNVSPDEVIRSLFYNK----NNDSLITVSVYASDNFSSLKCRS 77 (389)
Q Consensus 6 v~~i~~~--~~~~a~~~~~gtiklW~~--~tg~~l~tl~~~~~~~v~sv~~sp----dg~~l~s~s~~~~~d~~~l~~~~ 77 (389)
+..|.|+ |++|++++++++|++||+ .+++++.++..+ ..++.|+||| ||++|++++. .+ .+
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g--~~p~~va~sp~~~~dg~~l~v~~~---~~------~~ 249 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG--IEARSVESSKFKGYEDRYTIAGAY---WP------PQ 249 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC--SEEEEEEECCSTTCTTTEEEEEEE---ES------SE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecC--CCcceEEeCCCcCCCCCEEEEEEc---cC------Ce
Confidence 6778888 899999999999999999 899999999854 5789999999 9999998653 34 67
Q ss_pred eeEeEeccCCCCCcceeEee-------ecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEE--Eec-CCcEEEE
Q 016446 78 TKIEYIRRGKPDSGFALFES-------ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY--SIS-DKHVQEI 147 (389)
Q Consensus 78 ~~l~~i~~g~~~~~~~l~~~-------~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~--tl~-~~~V~~v 147 (389)
+.+||..++++......-.. .....+.+++||+.++.++++...+++|.+||+.+++++. ++. +..++++
T Consensus 250 v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~ 329 (543)
T 1nir_A 250 FAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDG 329 (543)
T ss_dssp EEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCE
T ss_pred EEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCc
Confidence 88999888886322111000 0112456799984355678899999999999998877543 444 5678999
Q ss_pred EEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEee----cCCceeEEEEEecCCCeEEE-Ee-CCCcEEEEECCC---
Q 016446 148 KIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH----LLHRNKKVDFIEQFNEKLLV-KQ-ENENLQILDVRN--- 217 (389)
Q Consensus 148 afS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~----~~~~~~~v~f~~~~~~~l~~-~s-~D~tIklWd~~t--- 217 (389)
+|+ +|++|++++. .+++|++||+.+|++++++.. |.+ ..+.|..|+++.+.+ ++ .|++|+|||..+
T Consensus 330 ~~spdg~~l~va~~--~~~~v~v~D~~tg~l~~~i~~g~~ph~g--~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~ 405 (543)
T 1nir_A 330 GWDSSHRYFMTAAN--NSNKVAVIDSKDRRLSALVDVGKTPHPG--RGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNH 405 (543)
T ss_dssp EECTTSCEEEEEEG--GGTEEEEEETTTTEEEEEEECSSSBCCT--TCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTC
T ss_pred eECCCCCEEEEEec--CCCeEEEEECCCCeEEEeeccCCCCCCC--CCcccCCCCCccEEEeccCCCceEEEEEeCCCCC
Confidence 999 5777776643 357999999999999999984 332 233444466555554 44 689999999998
Q ss_pred ----CeEEEEcccCCCceEEEEEcCCCcEEEEEc--------CCeEEEEeCC-CcEE-EEe--------ccCcCCcCCCC
Q 016446 218 ----AELMEVSRTEFMTPSAFIFLYENQLFLTFR--------NRTVAVWNFR-GELV-TSF--------EDHLLWHPDCN 275 (389)
Q Consensus 218 ----g~~~~~l~gh~~~v~sv~fspdg~~laS~s--------D~tIklWd~~-G~~l-~tl--------~gh~~~~~~~~ 275 (389)
+++++++.+|...+..|+|+|||++|.+++ +++|++||++ ++++ ..| ..|...
T Consensus 406 ~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~----- 480 (543)
T 1nir_A 406 PQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKR----- 480 (543)
T ss_dssp TTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCE-----
T ss_pred chhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCc-----
Confidence 899999999999999999999999999986 6799999996 8876 554 344443
Q ss_pred eeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCC
Q 016446 276 TNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATN 326 (389)
Q Consensus 276 v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~ 326 (389)
|..++|+|||++|..+.... -+.|++|.|||.+|++|+++++++.
T Consensus 481 ~~~~~~~~~g~~~~~s~~~~------~~~~~~i~v~D~~t~~~~~~i~~~~ 525 (543)
T 1nir_A 481 VVQPEYNKRGDEVWFSVWNG------KNDSSALVVVDDKTLKLKAVVKDPR 525 (543)
T ss_dssp EEEEEECSSSSEEEEEEECC------TTSCCEEEEEETTTTEEEEEECCTT
T ss_pred eEeccCCCCCCEEEEEeecC------CCCCCeEEEEECCCceEEEeecCCC
Confidence 79999999999999764310 0247999999999999999999765
No 130
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.5e-32 Score=271.85 Aligned_cols=246 Identities=11% Similarity=0.093 Sum_probs=199.0
Q ss_pred eeecCCcceEEEEEEeeC-CCEEEEEEEeecCCCcceeeeeeeEeEeccC--------CCCCcceeEeeecccCceeEEE
Q 016446 38 FLNVSPDEVIRSLFYNKN-NDSLITVSVYASDNFSSLKCRSTKIEYIRRG--------KPDSGFALFESESLKWPGFVEF 108 (389)
Q Consensus 38 tl~~~~~~~v~sv~~spd-g~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g--------~~~~~~~l~~~~~~~~~~~v~F 108 (389)
.+.+| ...|++++|+|+ ++.||+ ++.| ..+++|++... +......+ ..+...+.+++|
T Consensus 123 ~~~~h-~~~v~~l~~~p~~~~~lat----~~~d------g~V~vwd~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~ 189 (430)
T 2xyi_A 123 IKINH-EGEVNRARYMPQNACVIAT----KTPS------SDVLVFDYTKHPSKPEPSGECQPDLRL--RGHQKEGYGLSW 189 (430)
T ss_dssp EEEEE-SSCCSEEEEETTEEEEEEE----ECSS------SCEEEEEGGGSCSSCCTTCCCCCSEEE--ECCSSCCCCEEE
T ss_pred EEEcC-CCcEEEEEECCCCCcEEEE----ECCC------CcEEEEECCCcccccCccccCCCcEEe--cCCCCCeEEEEe
Confidence 34444 589999999998 667777 5567 78999999762 22111112 235556778999
Q ss_pred ecCCCe-EEEEecCCCeEEEEeCCCCeE-------EEEe--cCCcEEEEEEcC--CceEEEEecCCCCeeEEEEEcCCC-
Q 016446 109 DDVNGK-VLTYSAQDSIYKVFDLKNYTM-------LYSI--SDKHVQEIKISP--GIMLLIFNRSSSHVPLKILSIEDG- 175 (389)
Q Consensus 109 s~pdG~-~Las~s~D~tiklWdl~~g~~-------l~tl--~~~~V~~vafS~--g~~la~~~~~s~d~tiklWd~~tG- 175 (389)
+ |+++ +|++|+.|++|+|||+.++.. ...+ +...|.+|+|+| +.+||++ +.|++|++||+.++
T Consensus 190 ~-~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~---~~dg~i~i~d~~~~~ 265 (430)
T 2xyi_A 190 N-PNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSV---ADDQKLMIWDTRNNN 265 (430)
T ss_dssp C-TTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEE---ETTSEEEEEETTCSC
T ss_pred C-CCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEE---eCCCeEEEEECCCCC
Confidence 8 8888 999999999999999987321 2334 356899999996 5566665 44589999999988
Q ss_pred --eEEEEEeecCCceeEEEEEecCCC-eEEEEeCCCcEEEEECCC-CeEEEEcccCCCceEEEEEcCCCc-EEEEEc-CC
Q 016446 176 --TVLKVFYHLLHRNKKVDFIEQFNE-KLLVKQENENLQILDVRN-AELMEVSRTEFMTPSAFIFLYENQ-LFLTFR-NR 249 (389)
Q Consensus 176 --~~l~tl~~~~~~~~~v~f~~~~~~-~l~~~s~D~tIklWd~~t-g~~~~~l~gh~~~v~sv~fspdg~-~laS~s-D~ 249 (389)
+++.++..|...+..++|+ |++. .+++++.|++|+|||+++ ++++.++.+|...|.+++|+|+++ +|++++ |+
T Consensus 266 ~~~~~~~~~~~~~~v~~i~~~-p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~ 344 (430)
T 2xyi_A 266 TSKPSHTVDAHTAEVNCLSFN-PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 344 (430)
T ss_dssp SSSCSEEEECCSSCEEEEEEC-SSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred CCcceeEeecCCCCeEEEEeC-CCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCC
Confidence 6888998899999999998 5665 577889999999999998 678899999999999999999995 788888 99
Q ss_pred eEEEEeCCC---------------cEEEEeccCcCCcCCCCeeEEEECCCCC-EEEEEecCCCcccccCCCCCeEEEEeC
Q 016446 250 TVAVWNFRG---------------ELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYCKAEPEDQWMEGSAGSINVSSI 313 (389)
Q Consensus 250 tIklWd~~G---------------~~l~tl~gh~~~~~~~~v~sv~fSpdG~-~laS~s~D~~~~~~~~s~D~tIklWd~ 313 (389)
+|+|||+.. +++..+.+|... |.+++|+|+|+ +|||++.| |+|+||++
T Consensus 345 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~~~~~p~~~~~l~s~s~d-----------g~i~iw~~ 408 (430)
T 2xyi_A 345 RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAK-----ISDFSWNPNEPWIICSVSED-----------NIMQVWQM 408 (430)
T ss_dssp CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSC-----EEEEEECSSSTTEEEEEETT-----------SEEEEEEE
T ss_pred cEEEEeCCCCccccCccccccCCcceEEEcCCCCCC-----ceEEEECCCCCCEEEEEECC-----------CCEEEeEc
Confidence 999999953 788899999876 89999999999 89998764 99999998
Q ss_pred CCCe
Q 016446 314 LTGK 317 (389)
Q Consensus 314 ~tg~ 317 (389)
.++.
T Consensus 409 ~~~~ 412 (430)
T 2xyi_A 409 AENV 412 (430)
T ss_dssp CHHH
T ss_pred cccc
Confidence 7543
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=100.00 E-value=8.8e-31 Score=262.50 Aligned_cols=287 Identities=13% Similarity=0.107 Sum_probs=212.5
Q ss_pred ceEEEEEEeeCCC-EEEEEEEeecCCCcceeeeeeeEeEe--ccCCCCCcceeEeeecccCceeEEEec-----------
Q 016446 45 EVIRSLFYNKNND-SLITVSVYASDNFSSLKCRSTKIEYI--RRGKPDSGFALFESESLKWPGFVEFDD----------- 110 (389)
Q Consensus 45 ~~v~sv~~spdg~-~l~s~s~~~~~d~~~l~~~~~~l~~i--~~g~~~~~~~l~~~~~~~~~~~v~Fs~----------- 110 (389)
..++...|+++|. .|++++.....| ..+. ..++|||+ .+|++.....+. .+...+..++|++
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~-G~~~-~~i~lwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~~~~~~g~ 138 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPD-GSYN-VAYQLVDTGGAPGTVLAQNSYK--VNKQWLRYAGHTASDEVFEKLTGI 138 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTT-SCEE-EEEEEEECSSSTTCEEEEEEEE--ECGGGHHHHHHHHHHHHHHHHHSS
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCC-CeEE-EEEEEEeCCCCCCCEEeeeEEE--cChhHHHHHHHHHHHHHHHHHcCC
Confidence 4677888889886 454665432222 0011 48899999 888862222222 2222334455541
Q ss_pred --CCCeEEEEecCC------CeEEEEeCCCCeEEEEe--cCCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEE
Q 016446 111 --VNGKVLTYSAQD------SIYKVFDLKNYTMLYSI--SDKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLK 179 (389)
Q Consensus 111 --pdG~~Las~s~D------~tiklWdl~~g~~l~tl--~~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~ 179 (389)
+.+..||+++.+ ++|++||+.. .++..+ +...|.+++|| +|++||+++.++.+.+|++||+.+|++.
T Consensus 139 ~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~- 216 (415)
T 2hqs_A 139 KGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR- 216 (415)
T ss_dssp CCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-
T ss_pred CCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-
Confidence 125667766654 7999999964 444444 46789999999 6889998876655579999999999986
Q ss_pred EEeecCCceeEEEEEecCCCeEEE-EeCCC--cEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc--CC--eEE
Q 016446 180 VFYHLLHRNKKVDFIEQFNEKLLV-KQENE--NLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR--NR--TVA 252 (389)
Q Consensus 180 tl~~~~~~~~~v~f~~~~~~~l~~-~s~D~--tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s--D~--tIk 252 (389)
.+..|...+..++|+ |++.+|+. ++.|+ .|++||++++++ ..+.+|...+.+++|+|||++|+.++ ++ .|.
T Consensus 217 ~l~~~~~~~~~~~~s-pdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~ 294 (415)
T 2hqs_A 217 QVASFPRHNGAPAFS-PDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVY 294 (415)
T ss_dssp EEECCSSCEEEEEEC-TTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred EeecCCCcccCEEEc-CCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEE
Confidence 466677889999998 78888884 55555 499999999987 56788989999999999999998876 45 677
Q ss_pred EEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcc
Q 016446 253 VWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVD 332 (389)
Q Consensus 253 lWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~ 332 (389)
+||+.+..+..+..|... +.+++|||||++|++++.+. .+.+|++||+.+|++ ..|..|.
T Consensus 295 ~~d~~~~~~~~l~~~~~~-----~~~~~~spdG~~l~~~~~~~--------g~~~i~~~d~~~~~~-~~l~~~~------ 354 (415)
T 2hqs_A 295 KVNINGGAPQRITWEGSQ-----NQDADVSSDGKFMVMVSSNG--------GQQHIAKQDLATGGV-QVLSSTF------ 354 (415)
T ss_dssp EEETTSSCCEECCCSSSE-----EEEEEECTTSSEEEEEEECS--------SCEEEEEEETTTCCE-EECCCSS------
T ss_pred EEECCCCCEEEEecCCCc-----ccCeEECCCCCEEEEEECcC--------CceEEEEEECCCCCE-EEecCCC------
Confidence 779873334556666554 78999999999999988651 246999999999987 4566653
Q ss_pred cccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCC---cEEEcc
Q 016446 333 DELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHG---LVHVWS 388 (389)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~---tIrlW~ 388 (389)
.+.+++|||||++|++++.|+ .|.+||
T Consensus 355 -----------------------------~~~~~~~spdg~~l~~~s~~~~~~~l~~~d 384 (415)
T 2hqs_A 355 -----------------------------LDETPSLAPNGTMVIYSSSQGMGSVLNLVS 384 (415)
T ss_dssp -----------------------------SCEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred -----------------------------CcCCeEEcCCCCEEEEEEcCCCccEEEEEE
Confidence 688999999999999999887 788887
No 132
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=5.2e-32 Score=284.85 Aligned_cols=320 Identities=10% Similarity=-0.011 Sum_probs=227.6
Q ss_pred cEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcc--eEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 5 KVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDE--VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 5 ~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~--~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
++.++.|+ |+++++ +.||+|++||..+|++...+.++... .|.+++|||||+.|++++.+.... ..=....+.+
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~-~~~~~~~i~~ 95 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIY-QHSYTGYYVL 95 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCS-SSCCCSEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccce-eecceeeEEE
Confidence 35667788 777766 78999999999999998888765421 499999999999999976432210 0000157889
Q ss_pred eEeccCCCCCcceeEe-eecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEecC--CcE-------------
Q 016446 81 EYIRRGKPDSGFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHV------------- 144 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~~--~~V------------- 144 (389)
||+.+|++ ..+-. ..+...+..++|| |||+.||+++. ++|++||+.+|++...... ..+
T Consensus 96 ~d~~~~~~---~~l~~~~~~~~~~~~~~~S-PdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee 170 (723)
T 1xfd_A 96 SKIPHGDP---QSLDPPEVSNAKLQYAGWG-PKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEE 170 (723)
T ss_dssp EESSSCCC---EECCCTTCCSCCCSBCCBC-SSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHT
T ss_pred EECCCCce---EeccCCccccccccccEEC-CCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEE
Confidence 99988875 22211 1111225679998 99999999886 7999999999987655432 222
Q ss_pred -----EEEEEc-CCceEEEEecCC-------------------------------CCeeEEEEEcCCCeEEEEEeec---
Q 016446 145 -----QEIKIS-PGIMLLIFNRSS-------------------------------SHVPLKILSIEDGTVLKVFYHL--- 184 (389)
Q Consensus 145 -----~~vafS-~g~~la~~~~~s-------------------------------~d~tiklWd~~tG~~l~tl~~~--- 184 (389)
.+++|| ||++||+++.+. .+.+|++||+.+|++...+..+
T Consensus 171 ~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~ 250 (723)
T 1xfd_A 171 ILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDP 250 (723)
T ss_dssp TSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCG
T ss_pred eccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccC
Confidence 789999 688898876442 1348999999999987777754
Q ss_pred ---CCceeEEEEEecCCCeEEEEe----CCCcEEEEECCCCeEEEEccc-CCCceE----EEEEcCCCcEEEEE--c-CC
Q 016446 185 ---LHRNKKVDFIEQFNEKLLVKQ----ENENLQILDVRNAELMEVSRT-EFMTPS----AFIFLYENQLFLTF--R-NR 249 (389)
Q Consensus 185 ---~~~~~~v~f~~~~~~~l~~~s----~D~tIklWd~~tg~~~~~l~g-h~~~v~----sv~fspdg~~laS~--s-D~ 249 (389)
...+..++|+ ||+..+++.+ .+.+|++||+.+|++.+.+.. |..++. .++|||||+.|+.. . |+
T Consensus 251 ~~~~~~~~~~~~S-pDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 329 (723)
T 1xfd_A 251 RMREYYITMVKWA-TSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQG 329 (723)
T ss_dssp GGSSEEEEEEEES-SSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCS
T ss_pred CCccceeEEEEEe-CCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccC
Confidence 4677899998 6777665653 347899999999999887654 445554 78999999977753 3 77
Q ss_pred ------eEEEEe-CCCcE---EEEeccCcCCcCCCCeeE-EEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCC--
Q 016446 250 ------TVAVWN-FRGEL---VTSFEDHLLWHPDCNTNN-IYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTG-- 316 (389)
Q Consensus 250 ------tIklWd-~~G~~---l~tl~gh~~~~~~~~v~s-v~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg-- 316 (389)
.|.+|| ..+.. ++.|..+... +.. ++|||||++|+..+.+ ...++++||++..+
T Consensus 330 ~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~-----~~~~~~~spdg~~l~~~~~~--------~~~~~~~l~~~~~~~~ 396 (723)
T 1xfd_A 330 GRGKFYHITVSSSQPNSSNDNIQSITSGDWD-----VTKILAYDEKGNKIYFLSTE--------DLPRRRQLYSANTVGN 396 (723)
T ss_dssp SSSCEEEEEEECSSCCSSSCCCCBSCCSSSC-----EEEEEEEETTTTEEEEEESS--------SCTTCCEEEEECSSTT
T ss_pred CCcceeEEEEEeccCCCCccceeEeecCCeE-----EEeeeEEcCCCCEEEEEEcC--------CCCcceEEEEEeCCCC
Confidence 577788 45433 6667643222 344 7999999999876643 01178999998643
Q ss_pred eEEEEecC---CCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEec
Q 016446 317 KCLAKINA---TNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGN 379 (389)
Q Consensus 317 ~~l~tl~g---H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs 379 (389)
.....|.+ |. ..|.+++|||||+.||...
T Consensus 397 ~~~~~l~~~~~~~----------------------------------~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 397 FNRQCLSCDLVEN----------------------------------CTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp CCCBCSSTTSSSS----------------------------------CCCCEEEECTTSSEEEEEC
T ss_pred CCcceecccccCC----------------------------------CCeEEEEECCCCCEEEEEc
Confidence 23444443 33 4688999999999888643
No 133
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.98 E-value=8.6e-31 Score=275.68 Aligned_cols=309 Identities=12% Similarity=0.055 Sum_probs=224.1
Q ss_pred eeccEEEEEecCceEEEEecccceee-eeeecCCc----------------ceEEEEEEeeCCCEEEEEEEeecCCCcce
Q 016446 11 AARDIVFALAHSGVCAAFSRETNRRI-CFLNVSPD----------------EVIRSLFYNKNNDSLITVSVYASDNFSSL 73 (389)
Q Consensus 11 ~~~~~~a~~~~~gtiklW~~~tg~~l-~tl~~~~~----------------~~v~sv~~spdg~~l~s~s~~~~~d~~~l 73 (389)
+.++.++..+.++ | +||..||+.+ ..+..++. ..|.+++|||| +.|+.+ .+
T Consensus 33 w~g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-----~~---- 100 (706)
T 2z3z_A 33 WMGDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-----TQ---- 100 (706)
T ss_dssp EETTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-----ET----
T ss_pred CcCCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-----EC----
Confidence 3377788888888 8 9999999884 45544321 35999999999 666553 23
Q ss_pred eeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCC-----CeEEEEec-C-Cc---
Q 016446 74 KCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN-----YTMLYSIS-D-KH--- 143 (389)
Q Consensus 74 ~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~-----g~~l~tl~-~-~~--- 143 (389)
..+++||+.+|++ ..+. .....+.+++|| |||+.||++ .|++|++||+.+ |++..... + ..
T Consensus 101 --~~i~~~d~~~~~~---~~l~--~~~~~~~~~~~S-pdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~ 171 (706)
T 2z3z_A 101 --GGLVGFDMLARKV---TYLF--DTNEETASLDFS-PVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVY 171 (706)
T ss_dssp --TEEEEEETTTTEE---EEEE--CCTTCCTTCEEC-TTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEE
T ss_pred --CEEEEEECCCCce---EEcc--CCcccccCCcCC-CCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEc
Confidence 5888999988764 2232 233445679998 999999995 689999999998 88665433 2 22
Q ss_pred -----------EEEEEEc-CCceEEEEecC------------------------------CCCeeEEEEEcCCCeEEEEE
Q 016446 144 -----------VQEIKIS-PGIMLLIFNRS------------------------------SSHVPLKILSIEDGTVLKVF 181 (389)
Q Consensus 144 -----------V~~vafS-~g~~la~~~~~------------------------------s~d~tiklWd~~tG~~l~tl 181 (389)
+.+++|| ||++||+++.+ ..+.+|++||+.+|++....
T Consensus 172 g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~ 251 (706)
T 2z3z_A 172 GQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQ 251 (706)
T ss_dssp SSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECC
T ss_pred ccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeec
Confidence 4899999 68899887521 24578999999999976655
Q ss_pred e--ecCCceeEEEEEecCCCeEEEEeCCC-----cEEEEECCCC-eEEEEcc-cCCCc---eEEEEEcC--CCcEEEEEc
Q 016446 182 Y--HLLHRNKKVDFIEQFNEKLLVKQENE-----NLQILDVRNA-ELMEVSR-TEFMT---PSAFIFLY--ENQLFLTFR 247 (389)
Q Consensus 182 ~--~~~~~~~~v~f~~~~~~~l~~~s~D~-----tIklWd~~tg-~~~~~l~-gh~~~---v~sv~fsp--dg~~laS~s 247 (389)
. .|...+..++|+ |++..|++++.|+ +|++||+.+| ++..... .+..+ +.+++|+| ||++|++++
T Consensus 252 ~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~ 330 (706)
T 2z3z_A 252 TGEPKEKFLTNLSWS-PDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSR 330 (706)
T ss_dssp CCSCTTCEEEEEEEC-TTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEEC
T ss_pred cCCCCceeEeeEEEE-CCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEc
Confidence 3 355667899998 7888899887665 9999999999 4433332 23322 46789999 999999998
Q ss_pred -CCeEEEEeC--CCcEEEEeccCcCCcCCCCeeE-EEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEec
Q 016446 248 -NRTVAVWNF--RGELVTSFEDHLLWHPDCNTNN-IYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKIN 323 (389)
Q Consensus 248 -D~tIklWd~--~G~~l~tl~gh~~~~~~~~v~s-v~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~ 323 (389)
|++++||.+ +|++++.|.+|... |.+ ++|||||++|+.++.+. +.....|..||+.+|+ +..|.
T Consensus 331 ~~g~~~l~~~~~~~~~~~~l~~~~~~-----v~~~~~~spdg~~l~~~~~~~------~~~~~~l~~~d~~~~~-~~~l~ 398 (706)
T 2z3z_A 331 RDGWNHLYLYDTTGRLIRQVTKGEWE-----VTNFAGFDPKGTRLYFESTEA------SPLERHFYCIDIKGGK-TKDLT 398 (706)
T ss_dssp TTSSCEEEEEETTSCEEEECCCSSSC-----EEEEEEECTTSSEEEEEESSS------CTTCBEEEEEETTCCC-CEESC
T ss_pred cCCccEEEEEECCCCEEEecCCCCeE-----EEeeeEEcCCCCEEEEEecCC------CCceEEEEEEEcCCCC-ceecc
Confidence 999999987 48889999887654 566 89999999988776541 0001278888887776 45554
Q ss_pred CCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCC----CcEEEcc
Q 016446 324 ATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRH----GLVHVWS 388 (389)
Q Consensus 324 gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D----~tIrlW~ 388 (389)
|. ..|.+++|||||+.|+.+..+ +.|++||
T Consensus 399 -~~----------------------------------~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d 432 (706)
T 2z3z_A 399 -PE----------------------------------SGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTN 432 (706)
T ss_dssp -CS----------------------------------SSEEEEEECTTSSEEEEEEECSSCSCEEEEEE
T ss_pred -CC----------------------------------CceEEEEECCCCCEEEEEecCCCCCcEEEEEE
Confidence 44 478999999999999877544 5699997
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.98 E-value=4.4e-30 Score=241.85 Aligned_cols=276 Identities=9% Similarity=0.023 Sum_probs=216.3
Q ss_pred ccEEEEEecCceEEEEecccceeeeeeecCCcc-eEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCc
Q 016446 13 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDE-VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSG 91 (389)
Q Consensus 13 ~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~-~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~ 91 (389)
++++++++.+++|++||..+|+.+.++...+.. .+..++|+|||+.|+.+. ..+ ..+.+||+.+|+...
T Consensus 1 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~---~~~------~~v~~~d~~~~~~~~- 70 (337)
T 1pby_B 1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATV---NKS------ESLVKIDLVTGETLG- 70 (337)
T ss_dssp CEEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEE---TTT------TEEEEEETTTCCEEE-
T ss_pred CcEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEe---CCC------CeEEEEECCCCCeEe-
Confidence 367899999999999999999999998865422 478999999998776542 455 678899998887621
Q ss_pred ceeEeeec----ccCceeEEEecCCCeEEEEec------------CCCeEEEEeCCCCeEEEEec-CCcEEEEEEc-CCc
Q 016446 92 FALFESES----LKWPGFVEFDDVNGKVLTYSA------------QDSIYKVFDLKNYTMLYSIS-DKHVQEIKIS-PGI 153 (389)
Q Consensus 92 ~~l~~~~~----~~~~~~v~Fs~pdG~~Las~s------------~D~tiklWdl~~g~~l~tl~-~~~V~~vafS-~g~ 153 (389)
.+.... ...+..++|+ |||++|+.++ .|+.|++||+.+++.+..+. +..+.+++|+ +|.
T Consensus 71 --~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~ 147 (337)
T 1pby_B 71 --RIDLSTPEERVKSLFGAALS-PDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGS 147 (337)
T ss_dssp --EEECCBTTEEEECTTCEEEC-TTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSS
T ss_pred --eEEcCCcccccccccceEEC-CCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCC
Confidence 121111 1156789998 8999888886 68999999999999887776 5678899999 577
Q ss_pred eEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEe-CCC-----------------------c
Q 016446 154 MLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ-ENE-----------------------N 209 (389)
Q Consensus 154 ~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s-~D~-----------------------t 209 (389)
+|+++ ++.|++||+.+|+++..+..+. ....+.|+ |++..++..+ .++ +
T Consensus 148 ~l~~~-----~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~s-~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (337)
T 1pby_B 148 KLYGL-----GRDLHVMDPEAGTLVEDKPIQS-WEAETYAQ-PDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTG 220 (337)
T ss_dssp CEEEE-----SSSEEEEETTTTEEEEEECSTT-TTTTTBCC-CBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEE
T ss_pred EEEEe-----CCeEEEEECCCCcEeeeeeccc-cCCCceeC-CCccEEeeeccCCCceeeeeeccccccccccccccccc
Confidence 78776 2589999999999999887442 12244665 6676665544 333 5
Q ss_pred EEEEECCCCeEE-EEcccCCCceEEEEEcCCCcEEEEEcCCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCE
Q 016446 210 LQILDVRNAELM-EVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDL 287 (389)
Q Consensus 210 IklWd~~tg~~~-~~l~gh~~~v~sv~fspdg~~laS~sD~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~ 287 (389)
|.+||++++++. ..+..|...+..++|+|||++|+++ |++|++||+. ++++..+..+.. +.+++|+|||++
T Consensus 221 v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~ 293 (337)
T 1pby_B 221 LLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVPLPHS------YYSVNVSTDGST 293 (337)
T ss_dssp EEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEEEEECSSC------CCEEEECTTSCE
T ss_pred eEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCCcCcceecCCCc------eeeEEECCCCCE
Confidence 799999999885 2345677789999999999999888 8999999997 888888875433 579999999999
Q ss_pred EEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCC
Q 016446 288 IISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATN 326 (389)
Q Consensus 288 laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~ 326 (389)
|++++. |++|++||+.+++.+..+..+.
T Consensus 294 l~~~~~-----------~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 294 VWLGGA-----------LGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp EEEESB-----------SSEEEEEETTTCCEEEEEECGG
T ss_pred EEEEcC-----------CCcEEEEECcCCcEEEEEEcCC
Confidence 998755 4899999999999999997764
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.98 E-value=6.9e-29 Score=236.16 Aligned_cols=274 Identities=9% Similarity=0.016 Sum_probs=217.0
Q ss_pred ceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCe-EEEEecCCC
Q 016446 45 EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGK-VLTYSAQDS 123 (389)
Q Consensus 45 ~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~-~Las~s~D~ 123 (389)
..+..++|+|||+.|+.++..+. ..-+-..+.+||..+++. +........+..++|+ |||+ +++++..++
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~---~~~~~~~v~~~d~~~~~~-----~~~~~~~~~~~~~~~s-~dg~~l~v~~~~~~ 111 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSR---KLDKGGVVYRLDPVTLEV-----TQAIHNDLKPFGATIN-NTTQTLWFGNTVNS 111 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCT---TTEESEEEEEECTTTCCE-----EEEEEESSCCCSEEEE-TTTTEEEEEETTTT
T ss_pred cCccceEECCCCCEEEEEcCCCc---CCCCCccEEEEcCCCCeE-----EEEEecCCCcceEEEC-CCCCEEEEEecCCC
Confidence 46789999999999988664321 111127889999888876 2222223346789998 8998 556667789
Q ss_pred eEEEEeCCCCeEEEEecCC-----------cEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEE
Q 016446 124 IYKVFDLKNYTMLYSISDK-----------HVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKV 191 (389)
Q Consensus 124 tiklWdl~~g~~l~tl~~~-----------~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v 191 (389)
+|.+||+++++.+.++... .+.+++|+ +|++++++.. +.++.|.+||+.+++.+..+..+......+
T Consensus 112 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 190 (353)
T 3vgz_A 112 AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI-GKESVIWVVDGGNIKLKTAIQNTGKMSTGL 190 (353)
T ss_dssp EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEE-SSSCEEEEEETTTTEEEEEECCCCTTCCCC
T ss_pred EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEec-CCCceEEEEcCCCCceEEEecCCCCccceE
Confidence 9999999999988777531 27999999 5787777642 335789999999999999998666668899
Q ss_pred EEEecCCCeEEEEeCCCcEEEEECCCCeEEEEccc----CCCceEEEEEcCCCcEEEEEc--CCeEEEEeCC-CcEEEEe
Q 016446 192 DFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT----EFMTPSAFIFLYENQLFLTFR--NRTVAVWNFR-GELVTSF 264 (389)
Q Consensus 192 ~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~g----h~~~v~sv~fspdg~~laS~s--D~tIklWd~~-G~~l~tl 264 (389)
+|+ |++.++++++.|+.|.+||+++++.+..+.. +...+..++|+|||++|..+. ++.|.+||.. |+++..+
T Consensus 191 ~~s-~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 269 (353)
T 3vgz_A 191 ALD-SEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKV 269 (353)
T ss_dssp EEE-TTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred EEC-CCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 998 7889999999999999999999999887654 666788999999999766664 6999999996 9998888
Q ss_pred ccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCcc
Q 016446 265 EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSK 344 (389)
Q Consensus 265 ~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~ 344 (389)
..+.. ..++|+|||++|+.++. .+++|.+||+.+++.+..+..+.
T Consensus 270 ~~~~~-------~~~~~s~dg~~l~v~~~----------~~~~v~~~d~~~~~~~~~~~~~~------------------ 314 (353)
T 3vgz_A 270 AAPES-------LAVLFNPARNEAYVTHR----------QAGKVSVIDAKSYKVVKTFDTPT------------------ 314 (353)
T ss_dssp ECSSC-------CCEEEETTTTEEEEEET----------TTTEEEEEETTTTEEEEEEECCS------------------
T ss_pred EcCCC-------ceEEECCCCCEEEEEEC----------CCCeEEEEECCCCeEEEEEecCC------------------
Confidence 75432 47999999997766653 25899999999999999987654
Q ss_pred ccccccceecccccccCCEEEEEECCCCCEEEEecCC
Q 016446 345 KLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRH 381 (389)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D 381 (389)
.+.+++|+|||+.|+.+..+
T Consensus 315 -----------------~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 315 -----------------HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp -----------------EEEEEEECTTSCEEEEEEEC
T ss_pred -----------------CCCeEEEcCCCCEEEEEEcc
Confidence 68899999999977776655
No 136
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.98 E-value=5.3e-30 Score=284.00 Aligned_cols=327 Identities=10% Similarity=0.003 Sum_probs=241.4
Q ss_pred ccEEEEEee--ccEEEEEecC------ceEEEEecccceeeeeeecCCcceE-------EEEEEeeCCCEEEEEEEeecC
Q 016446 4 TKVIEIVAA--RDIVFALAHS------GVCAAFSRETNRRICFLNVSPDEVI-------RSLFYNKNNDSLITVSVYASD 68 (389)
Q Consensus 4 ~~v~~i~~~--~~~~a~~~~~------gtiklW~~~tg~~l~tl~~~~~~~v-------~sv~~spdg~~l~s~s~~~~~ 68 (389)
..|.++.|+ |+.||.++.+ .+|++|+.++|+ ++.|.+|. ..+ .+++|||||+.+++++.+...
T Consensus 53 ~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~-~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~ 130 (1045)
T 1k32_A 53 GVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFS-GKSTGRRMFTDVAGFDPDGNLIISTDAMQPF 130 (1045)
T ss_dssp SEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCC-EEEETTEECSEEEEECTTCCEEEEECTTSSS
T ss_pred CcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCC-CcccccccccccccCCCCCEEEEEECCcCCC
Confidence 458899999 9999988654 489999998666 67888875 677 999999999955554321100
Q ss_pred CCcceeeeeeeEeEeccCCC------------------------------------------------------------
Q 016446 69 NFSSLKCRSTKIEYIRRGKP------------------------------------------------------------ 88 (389)
Q Consensus 69 d~~~l~~~~~~l~~i~~g~~------------------------------------------------------------ 88 (389)
+ .. ..+.+|++..|+.
T Consensus 131 ~-~~---~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v 206 (1045)
T 1k32_A 131 S-SM---TCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHV 206 (1045)
T ss_dssp T-TC---CEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCC
T ss_pred c-cc---ceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcc
Confidence 0 00 0111122111110
Q ss_pred ----------------CCcceeEeee----------cccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEecCC
Q 016446 89 ----------------DSGFALFESE----------SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK 142 (389)
Q Consensus 89 ----------------~~~~~l~~~~----------~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~~~ 142 (389)
+....+|... ....+..++|| |||+.||++ .|++|++||++.. .+..+...
T Consensus 207 ~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~S-pDG~~la~~-~~~~i~~~d~~~~-~l~~l~~~ 283 (1045)
T 1k32_A 207 SSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLN-TDGRRILFS-KGGSIYIFNPDTE-KIEKIEIG 283 (1045)
T ss_dssp EEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEE-ESSSCEEEE-ETTEEEEECTTTC-CEEECCCC
T ss_pred cceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEc-CCCCEEEEE-eCCEEEEecCCce-EeeeeccC
Confidence 0011233211 01113457998 899999988 4899999999544 44466542
Q ss_pred -------------cEEEEEEc-C-CceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCC-ceeEEEEEecCCCeEEEEeC
Q 016446 143 -------------HVQEIKIS-P-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLH-RNKKVDFIEQFNEKLLVKQE 206 (389)
Q Consensus 143 -------------~V~~vafS-~-g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~-~~~~v~f~~~~~~~l~~~s~ 206 (389)
.|.+++|| | |++||+++ +++|++|++.+|+... +..|.. .+..++|+ +++.++..+.
T Consensus 284 ~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~----~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s--dg~~l~~~s~ 356 (1045)
T 1k32_A 284 DLESPEDRIISIPSKFAEDFSPLDGDLIAFVS----RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD--TKVAFIHGTR 356 (1045)
T ss_dssp CCCBCCSEEEECGGGGEEEEEECGGGCEEEEE----TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS--SEEEEEEEET
T ss_pred cccccccccccccccceeeecCCCCCEEEEEE----cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc--CCCeEEEEEC
Confidence 58999999 7 67787765 4689999999887654 666666 78889987 7788888888
Q ss_pred CCcEE-EEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECC
Q 016446 207 NENLQ-ILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITS 283 (389)
Q Consensus 207 D~tIk-lWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSp 283 (389)
+..|. +||+.++++.... +|...+..++|||||++||+++ |++|++||++ |++...+++|... +.+++|||
T Consensus 357 ~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~-----v~~~~~Sp 430 (1045)
T 1k32_A 357 EGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAM-----ITDFTISD 430 (1045)
T ss_dssp TEEEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSC-----CCCEEECT
T ss_pred CCceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCC-----ccceEECC
Confidence 88898 9999988876654 8889999999999999999998 9999999997 8888888788776 68999999
Q ss_pred CCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCE
Q 016446 284 DQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDI 363 (389)
Q Consensus 284 dG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V 363 (389)
||++||+++.+... ......+++|++||+.+|+ +..+.+|. ..+
T Consensus 431 DG~~la~~~~~~~~-~~~~~~~~~i~l~d~~~g~-~~~l~~~~----------------------------------~~~ 474 (1045)
T 1k32_A 431 NSRFIAYGFPLKHG-ETDGYVMQAIHVYDMEGRK-IFAATTEN----------------------------------SHD 474 (1045)
T ss_dssp TSCEEEEEEEECSS-TTCSCCEEEEEEEETTTTE-EEECSCSS----------------------------------SBE
T ss_pred CCCeEEEEecCccc-cccCCCCCeEEEEECCCCc-EEEeeCCC----------------------------------ccc
Confidence 99999998764000 0000123699999999888 77888887 478
Q ss_pred EEEEECCCCCEEEEecCCCcEEEcc
Q 016446 364 TSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 364 ~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
.+++|||||+.|+.++.++..++|+
T Consensus 475 ~~~~~spdG~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 475 YAPAFDADSKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp EEEEECTTSCEEEEEESCCCCCEEC
T ss_pred CCceEcCCCCEEEEEecccCCcCcc
Confidence 8999999999999999999888886
No 137
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.97 E-value=9.4e-30 Score=282.01 Aligned_cols=315 Identities=11% Similarity=0.023 Sum_probs=229.6
Q ss_pred ccEEEEEeeccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEee--cCCCcceeeeeeeEe
Q 016446 4 TKVIEIVAARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYA--SDNFSSLKCRSTKIE 81 (389)
Q Consensus 4 ~~v~~i~~~~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~--~~d~~~l~~~~~~l~ 81 (389)
..+..+.|+++.||..+. +.+.+|++++|+ .+.|.+|. ..|.+++|||||+.||+++.+. ..+ .++++|
T Consensus 15 ~~~~~~~~S~~~iaf~~~-~~l~~~~~~gg~-~~~lt~~~-~~v~~~~~SPDG~~la~~s~~~~~~~~------~~i~~~ 85 (1045)
T 1k32_A 15 NLLLNPDIHGDRIIFVCC-DDLWEHDLKSGS-TRKIVSNL-GVINNARFFPDGRKIAIRVMRGSSLNT------ADLYFY 85 (1045)
T ss_dssp CCCEEEEEETTEEEEEET-TEEEEEETTTCC-EEEEECSS-SEEEEEEECTTSSEEEEEEEESTTCCE------EEEEEE
T ss_pred ceEeCcEEeCCEEEEEEC-CcEEEEECCCCc-EEEeeeCC-CcccCeEECCCCCEEEEEEeeccCCCC------CeEEEE
Confidence 457888999999998886 799999997555 56788764 8999999999999999987652 122 578899
Q ss_pred EeccCCCCCcceeEeeecccCc-------eeEEEecCCCeEEEEecCC------CeEEEEeCCCCeEEEEe---------
Q 016446 82 YIRRGKPDSGFALFESESLKWP-------GFVEFDDVNGKVLTYSAQD------SIYKVFDLKNYTMLYSI--------- 139 (389)
Q Consensus 82 ~i~~g~~~~~~~l~~~~~~~~~-------~~v~Fs~pdG~~Las~s~D------~tiklWdl~~g~~l~tl--------- 139 (389)
++..|+. ..|.. +...+ ..++|| |||+++++++.| ..|.+|++.++++....
T Consensus 86 d~~~g~~---~~lt~--~~~~~~~~~~~~~~~~~S-pDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~ 159 (1045)
T 1k32_A 86 NGENGEI---KRITY--FSGKSTGRRMFTDVAGFD-PDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILF 159 (1045)
T ss_dssp ETTTTEE---EECCC--CCEEEETTEECSEEEEEC-TTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEE
T ss_pred ECCCCCe---EEccc--CCCcccccccccccccCC-CCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeee
Confidence 9877763 22221 22223 679998 999988888755 45777888776643110
Q ss_pred ------------------------------------------cCCcEEEEEEcCCceEEEEecCCCCeeEEEEEcCC-Ce
Q 016446 140 ------------------------------------------SDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIED-GT 176 (389)
Q Consensus 140 ------------------------------------------~~~~V~~vafS~g~~la~~~~~s~d~tiklWd~~t-G~ 176 (389)
+...|.+++|+++.+++++ +.|++++||.+.. |.
T Consensus 160 spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~---~~dg~~~l~~~~~~g~ 236 (1045)
T 1k32_A 160 ADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFIT---DIDGFGQIYSTDLDGK 236 (1045)
T ss_dssp ETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEE---CTTSSCEEEEEETTSC
T ss_pred CCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCCEEEEEE---eccCceEEEEEeCCCC
Confidence 1124555666655333332 2345666765432 22
Q ss_pred EEEEE---------------------------------------ee-----------cCCceeEEEEEecCCCeEEEEeC
Q 016446 177 VLKVF---------------------------------------YH-----------LLHRNKKVDFIEQFNEKLLVKQE 206 (389)
Q Consensus 177 ~l~tl---------------------------------------~~-----------~~~~~~~v~f~~~~~~~l~~~s~ 206 (389)
.++.+ .+ |...+..++|++|++..+++++
T Consensus 237 ~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~- 315 (1045)
T 1k32_A 237 DLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS- 315 (1045)
T ss_dssp SCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-
T ss_pred cceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-
Confidence 22222 21 1224667777645667777766
Q ss_pred CCcEEEEECCCCeEEEEcccCCC-ceEEEEEcCCCcEEEEEc-CCeEE-EEeCCCcEEEEeccCcCCcCCCCeeEEEECC
Q 016446 207 NENLQILDVRNAELMEVSRTEFM-TPSAFIFLYENQLFLTFR-NRTVA-VWNFRGELVTSFEDHLLWHPDCNTNNIYITS 283 (389)
Q Consensus 207 D~tIklWd~~tg~~~~~l~gh~~-~v~sv~fspdg~~laS~s-D~tIk-lWd~~G~~l~tl~gh~~~~~~~~v~sv~fSp 283 (389)
+++|.+|++.+++..+ +..|.. .+..++|+ ||+.|+.++ +..+. +||+.+.....+.+|... +..++|||
T Consensus 316 ~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~-----~~~~~~Sp 388 (1045)
T 1k32_A 316 RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGN-----VFAMGVDR 388 (1045)
T ss_dssp TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCS-----EEEEEECT
T ss_pred cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccc-----eeeeEECC
Confidence 7889999998887655 567777 89999999 999999998 77888 889985445566677654 79999999
Q ss_pred CCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCE
Q 016446 284 DQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDI 363 (389)
Q Consensus 284 dG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V 363 (389)
||++||+++.+ ++|++||+.+|++...+.+|. ..|
T Consensus 389 DG~~la~~~~~-----------~~v~~~d~~tg~~~~~~~~~~----------------------------------~~v 423 (1045)
T 1k32_A 389 NGKFAVVANDR-----------FEIMTVDLETGKPTVIERSRE----------------------------------AMI 423 (1045)
T ss_dssp TSSEEEEEETT-----------SEEEEEETTTCCEEEEEECSS----------------------------------SCC
T ss_pred CCCEEEEECCC-----------CeEEEEECCCCceEEeccCCC----------------------------------CCc
Confidence 99999998764 899999999999998888887 478
Q ss_pred EEEEECCCCCEEEEecCCC----------cEEEccC
Q 016446 364 TSLFYDEERNEIYTGNRHG----------LVHVWSN 389 (389)
Q Consensus 364 ~svafSpdg~~LaSgs~D~----------tIrlW~~ 389 (389)
.+++|||||++||+++.++ +|++||.
T Consensus 424 ~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~ 459 (1045)
T 1k32_A 424 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM 459 (1045)
T ss_dssp CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEET
T ss_pred cceEECCCCCeEEEEecCccccccCCCCCeEEEEEC
Confidence 8999999999999998755 9999983
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.97 E-value=2.8e-28 Score=231.36 Aligned_cols=282 Identities=14% Similarity=0.145 Sum_probs=208.7
Q ss_pred ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcc
Q 016446 13 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 92 (389)
Q Consensus 13 ~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~ 92 (389)
+..+++.+.+++|++||.++|+++..+..+. ..+ .++|+|||+.|+.++ ..+ ..+.+||+.+|++. .
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~-~~~~s~dg~~l~~~~---~~~------~~i~~~d~~~~~~~--~ 76 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITLGY-DFV-DTAITSDCSNVVVTS---DFC------QTLVQIETQLEPPK--V 76 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEECCC-CEE-EEEECSSSCEEEEEE---STT------CEEEEEECSSSSCE--E
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEccC-Ccc-eEEEcCCCCEEEEEe---CCC------CeEEEEECCCCcee--E
Confidence 5668888999999999999999999988764 566 999999999877754 234 58889999888751 1
Q ss_pred eeEeeecccCcee-EEEecCCCeEEEEecCCC---eEEEEeCCCCeEEEEec-CCcEEEEEEc-CCceEEEEecCCCCee
Q 016446 93 ALFESESLKWPGF-VEFDDVNGKVLTYSAQDS---IYKVFDLKNYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRSSSHVP 166 (389)
Q Consensus 93 ~l~~~~~~~~~~~-v~Fs~pdG~~Las~s~D~---tiklWdl~~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~s~d~t 166 (389)
..+ .....+.. ++|+ |||++|+.+..++ +|++||+.+++++.++. +....+++|+ +|++|+++... +.+
T Consensus 77 ~~~--~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~--~~~ 151 (331)
T 3u4y_A 77 VAI--QEGQSSMADVDIT-PDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRS--SAN 151 (331)
T ss_dssp EEE--EECSSCCCCEEEC-TTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEET--TTT
T ss_pred Eec--ccCCCCccceEEC-CCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecC--CCc
Confidence 112 22234556 9998 9999999555553 99999999999988886 5678999999 57767666433 356
Q ss_pred -EEEEEcCCCeEE-----EEEeecCCceeEEEEEecCCCeEEEEe-CCCcEEEEECCCCeE---EEEcccCCCceEEEEE
Q 016446 167 -LKILSIEDGTVL-----KVFYHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAEL---MEVSRTEFMTPSAFIF 236 (389)
Q Consensus 167 -iklWd~~tG~~l-----~tl~~~~~~~~~v~f~~~~~~~l~~~s-~D~tIklWd~~tg~~---~~~l~gh~~~v~sv~f 236 (389)
|++|++.....+ +.+ ........++|+ |++.++++++ .+++|++||++++++ +..+..+ ..+..++|
T Consensus 152 ~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~s-pdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~ 228 (331)
T 3u4y_A 152 TVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFT-PDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVV 228 (331)
T ss_dssp EEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEEC-TTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEE
T ss_pred eEEEEEECCCCcEeecCCccc-cCCCCccceEEC-CCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEE
Confidence 999998764443 222 233556889998 7787676654 799999999999998 7777755 57889999
Q ss_pred cCCCcEEEEE-c-CCeEEEEeCC-CcE--EEEeccCc--CCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEE
Q 016446 237 LYENQLFLTF-R-NRTVAVWNFR-GEL--VTSFEDHL--LWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSIN 309 (389)
Q Consensus 237 spdg~~laS~-s-D~tIklWd~~-G~~--l~tl~gh~--~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIk 309 (389)
+|||++|+.+ . +++|.+||.+ |++ +.++..+. ...+......++|||||++|+.++.+ +++|+
T Consensus 229 spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~----------~~~v~ 298 (331)
T 3u4y_A 229 SRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANI----------SRELK 298 (331)
T ss_dssp CTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT----------TTEEE
T ss_pred CCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCC----------CCcEE
Confidence 9999966555 4 8899999997 877 66655441 11111113568999999999877665 58999
Q ss_pred EEeCCCCeEEEEecCCC
Q 016446 310 VSSILTGKCLAKINATN 326 (389)
Q Consensus 310 lWd~~tg~~l~tl~gH~ 326 (389)
+||+.+. .+..+.++.
T Consensus 299 v~d~~~~-~~~~~~~~~ 314 (331)
T 3u4y_A 299 VFTISGK-VVGYVAGIE 314 (331)
T ss_dssp EEETTSC-EEEECTTCC
T ss_pred EEEecCC-cccceeccc
Confidence 9998754 445555544
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=8.2e-30 Score=269.23 Aligned_cols=279 Identities=13% Similarity=0.122 Sum_probs=212.7
Q ss_pred ceEEEEEEeeCCCEEEEEEE-eecCCCcceeeeeeeEeEeccCCCCCcceeEeee-cc----------------------
Q 016446 45 EVIRSLFYNKNNDSLITVSV-YASDNFSSLKCRSTKIEYIRRGKPDSGFALFESE-SL---------------------- 100 (389)
Q Consensus 45 ~~v~sv~~spdg~~l~s~s~-~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~-~~---------------------- 100 (389)
..|.+++|||||+.|++++. ++... ..++++|++.+|+. ..++... ..
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~-----~~~i~~~d~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRN-----QLDLWSYDIGSGQT---RLLVDSKVVLPGTETLSDEEKARRERQRIAAM 108 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTT-----EEEEEEEETTTCCE---EEEECGGGTC--------------------CC
T ss_pred CCCCCceEecCCCEEEEEeccCCCCc-----ccEEEEEECCCCce---eEccchhhcccccccccchhhhhhhhhhhccc
Confidence 57899999999999999764 22111 13789999988875 2233211 11
Q ss_pred cCceeEEEecCCCeEEEEecCCCeEEEEeCCCC---eEEEEec--CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCC
Q 016446 101 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY---TMLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIED 174 (389)
Q Consensus 101 ~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g---~~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~t 174 (389)
..+.+++|| |||++|++++. ++|++||+.++ ++ ..+. ...+.+++|| ||++||.++ + .+|++||+.+
T Consensus 109 ~~v~~~~~S-pDg~~l~~~~~-~~i~~~d~~~~~~~~~-~~l~~~~~~~~~~~~SPDG~~la~~~-~---~~i~~~d~~~ 181 (741)
T 2ecf_A 109 TGIVDYQWS-PDAQRLLFPLG-GELYLYDLKQEGKAAV-RQLTHGEGFATDAKLSPKGGFVSFIR-G---RNLWVIDLAS 181 (741)
T ss_dssp EESCCCEEC-TTSSEEEEEET-TEEEEEESSSCSTTSC-CBCCCSSSCEEEEEECTTSSEEEEEE-T---TEEEEEETTT
T ss_pred cCcceeEEC-CCCCEEEEEeC-CcEEEEECCCCCcceE-EEcccCCcccccccCCCCCCEEEEEe-C---CcEEEEecCC
Confidence 125679998 99999999886 99999999888 43 3333 4689999999 688888764 2 4899999999
Q ss_pred CeEEEEEeecCCc----------------eeEEEEEecCCCeEEEEeCCC------------------------------
Q 016446 175 GTVLKVFYHLLHR----------------NKKVDFIEQFNEKLLVKQENE------------------------------ 208 (389)
Q Consensus 175 G~~l~tl~~~~~~----------------~~~v~f~~~~~~~l~~~s~D~------------------------------ 208 (389)
|++.+....+... +..++|+ ||+.+|+.++.|+
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~S-pDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~ 260 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWA-PDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDAN 260 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEEC-TTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCC
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEEC-CCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCC
Confidence 9887765543332 4779998 8899999987665
Q ss_pred ---cEEEEECCC-CeEEEEcc--cCCCceEEEEEcCCCcEEEEEc------CCeEEEEeCC-CcEEEEeccCcC-CcCCC
Q 016446 209 ---NLQILDVRN-AELMEVSR--TEFMTPSAFIFLYENQLFLTFR------NRTVAVWNFR-GELVTSFEDHLL-WHPDC 274 (389)
Q Consensus 209 ---tIklWd~~t-g~~~~~l~--gh~~~v~sv~fspdg~~laS~s------D~tIklWd~~-G~~l~tl~gh~~-~~~~~ 274 (389)
+|.+||+.+ +++..... +|...+.+++| |||++|+.++ +.+|.+||+. |++...+..|.. ++.
T Consensus 261 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~-- 337 (741)
T 2ecf_A 261 VQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVP-- 337 (741)
T ss_dssp CEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCC--
T ss_pred CeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCC--
Confidence 899999999 99877654 48889999999 9999998653 4689999997 898888877653 210
Q ss_pred CeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCC-CCeEEEEecCCCCCCCcccccCCCCCCCcccccccccee
Q 016446 275 NTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL-TGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIR 353 (389)
Q Consensus 275 ~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~-tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (389)
.+.+++|||||++|++++. |++++||.+. +|+ +..|.+|.
T Consensus 338 ~~~~~~~spdg~~~~~~~~-----------~g~~~l~~~~~~~~-~~~l~~~~--------------------------- 378 (741)
T 2ecf_A 338 LHNSLRFLDDGSILWSSER-----------TGFQHLYRIDSKGK-AAALTHGN--------------------------- 378 (741)
T ss_dssp CCSCCEECTTSCEEEEECT-----------TSSCEEEEECSSSC-EEESCCSS---------------------------
T ss_pred cCCceEECCCCeEEEEecC-----------CCccEEEEEcCCCC-eeeeeecc---------------------------
Confidence 1468999999999888765 4778888764 566 88888876
Q ss_pred cccccccCCEEEE-EECCCCCEEE-EecCCC--cEEEcc
Q 016446 354 STVGEALEDITSL-FYDEERNEIY-TGNRHG--LVHVWS 388 (389)
Q Consensus 354 ~~~~~~~~~V~sv-afSpdg~~La-Sgs~D~--tIrlW~ 388 (389)
..|.++ +|||||+.|+ +++.|+ +++||+
T Consensus 379 -------~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 410 (741)
T 2ecf_A 379 -------WSVDELLAVDEKAGLAYFRAGIESARESQIYA 410 (741)
T ss_dssp -------SCEEEEEEEETTTTEEEEEECSSCTTCBEEEE
T ss_pred -------eEEEeEeEEeCCCCEEEEEEeCCCCceEEEEE
Confidence 478887 5999999775 566666 999996
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.97 E-value=5.6e-30 Score=269.34 Aligned_cols=277 Identities=13% Similarity=0.097 Sum_probs=203.9
Q ss_pred eEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecc--cCceeEEEecCCCeEEEEecCC-
Q 016446 46 VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESL--KWPGFVEFDDVNGKVLTYSAQD- 122 (389)
Q Consensus 46 ~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~--~~~~~v~Fs~pdG~~Las~s~D- 122 (389)
.+.+++|||||+.|++ +.| .++++|++.+|+. ..++..... ..+.+++|| |||++||+++.|
T Consensus 18 ~~~~~~~spdg~~~~~-----~~d------g~i~~~d~~~g~~---~~~~~~~~~~~~~v~~~~~S-pDg~~l~~~~~~~ 82 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-----EQK------GTVRLWNVETNTS---TVLIEGKKIESLRAIRYEIS-PDREYALFSYNVE 82 (723)
T ss_dssp CCCCCCBSSSSCBCCC-----CSS------SCEEEBCGGGCCC---EEEECTTTTTTTTCSEEEEC-TTSSEEEEEESCC
T ss_pred cccccEEcCCCcEEEE-----eCC------CCEEEEECCCCcE---EEEeccccccccccceEEEC-CCCCEEEEEecCc
Confidence 4688999999996654 255 5889999999986 234331111 136789998 999999999875
Q ss_pred --------CeEEEEeCCCCeEEEEec---C--CcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCce
Q 016446 123 --------SIYKVFDLKNYTMLYSIS---D--KHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRN 188 (389)
Q Consensus 123 --------~tiklWdl~~g~~l~tl~---~--~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~ 188 (389)
++|++||+.++++ ..+. . ..|..++|| +|++||.++. ++|++||+.+|++.+....+...+
T Consensus 83 ~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~----~~i~~~~~~~g~~~~~~~~~~~~~ 157 (723)
T 1xfd_A 83 PIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE----NNIYYCAHVGKQAIRVVSTGKEGV 157 (723)
T ss_dssp CCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET----TEEEEESSSSSCCEEEECCCBTTT
T ss_pred cceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC----CeEEEEECCCCceEEEecCCCCCc
Confidence 7888999999986 3332 1 248999999 6889988753 589999999999887776543322
Q ss_pred ------------------eEEEEEecCCCeEEEEeCCC----------------------------------cEEEEECC
Q 016446 189 ------------------KKVDFIEQFNEKLLVKQENE----------------------------------NLQILDVR 216 (389)
Q Consensus 189 ------------------~~v~f~~~~~~~l~~~s~D~----------------------------------tIklWd~~ 216 (389)
..++|+ ||+.+|+.++.|+ +|++||+.
T Consensus 158 ~~~g~~~~v~~ee~~~~~~~~~~S-pDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~ 236 (723)
T 1xfd_A 158 IYNGLSDWLYEEEILKTHIAHWWS-PDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLN 236 (723)
T ss_dssp EEEEECCHHHHHTTSSSSEEEEEC-TTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESS
T ss_pred eECcccceeEEEEeccCcceEEEC-CCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECC
Confidence 689998 8899999987543 89999999
Q ss_pred CCeEEEEcccC------CCceEEEEEcCCCcEEEEEc-----CCeEEEEeCC-CcEEEEeccC-cCCcCCCCeeEEEECC
Q 016446 217 NAELMEVSRTE------FMTPSAFIFLYENQLFLTFR-----NRTVAVWNFR-GELVTSFEDH-LLWHPDCNTNNIYITS 283 (389)
Q Consensus 217 tg~~~~~l~gh------~~~v~sv~fspdg~~laS~s-----D~tIklWd~~-G~~l~tl~gh-~~~~~~~~v~sv~fSp 283 (389)
++++...+..| ...+.+++|||||++|++.. +.+|++||+. |++...+..+ ..++... ...++|||
T Consensus 237 ~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~-~~~~~~sp 315 (723)
T 1xfd_A 237 GPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQ-NEEPVFSK 315 (723)
T ss_dssp SSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCC-CCCCEECT
T ss_pred CCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEecc-CCCceEcC
Confidence 99986777664 67899999999999997764 2589999996 8888777654 3432100 03789999
Q ss_pred CCCEEEEE-ecCCCcccccCCCCC------eEEEEe-CCCCe--EEEEecCCCCCCCcccccCCCCCCCcccccccccee
Q 016446 284 DQDLIISY-CKAEPEDQWMEGSAG------SINVSS-ILTGK--CLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIR 353 (389)
Q Consensus 284 dG~~laS~-s~D~~~~~~~~s~D~------tIklWd-~~tg~--~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (389)
||++|+.. +.. |+ .|.+|| ..+++ |+..|..+.
T Consensus 316 dg~~l~~~~~~~----------~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~--------------------------- 358 (723)
T 1xfd_A 316 DGRKFFFIRAIP----------QGGRGKFYHITVSSSQPNSSNDNIQSITSGD--------------------------- 358 (723)
T ss_dssp TSCSEEEEEEEC----------CSSSSCEEEEEEECSSCCSSSCCCCBSCCSS---------------------------
T ss_pred CCCeEEEEEecc----------cCCCcceeEEEEEeccCCCCccceeEeecCC---------------------------
Confidence 99988865 322 35 577788 44454 255565332
Q ss_pred cccccccCCEEE-EEECCCCCEEEEecCC---CcEEEcc
Q 016446 354 STVGEALEDITS-LFYDEERNEIYTGNRH---GLVHVWS 388 (389)
Q Consensus 354 ~~~~~~~~~V~s-vafSpdg~~LaSgs~D---~tIrlW~ 388 (389)
..+.. ++|||||+.|+..+.+ ++++||+
T Consensus 359 -------~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 359 -------WDVTKILAYDEKGNKIYFLSTEDLPRRRQLYS 390 (723)
T ss_dssp -------SCEEEEEEEETTTTEEEEEESSSCTTCCEEEE
T ss_pred -------eEEEeeeEEcCCCCEEEEEEcCCCCcceEEEE
Confidence 24444 7999999999866554 8999996
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.97 E-value=4.5e-28 Score=229.90 Aligned_cols=279 Identities=7% Similarity=0.066 Sum_probs=195.5
Q ss_pred EEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEec-CCCeEEEE
Q 016446 50 LFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA-QDSIYKVF 128 (389)
Q Consensus 50 v~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s-~D~tiklW 128 (389)
..|+++++.+..+ ...+ ..+.+||+.+|++. ..+. .....+ .++|+ |||++|+.++ .+++|++|
T Consensus 3 ~~~~~~~~~~~v~---~~~~------~~v~~~d~~~~~~~---~~~~-~~~~~~-~~~~s-~dg~~l~~~~~~~~~i~~~ 67 (331)
T 3u4y_A 3 AMFQTTSNFGIVV---EQHL------RRISFFSTDTLEIL---NQIT-LGYDFV-DTAIT-SDCSNVVVTSDFCQTLVQI 67 (331)
T ss_dssp ----CCCCEEEEE---EGGG------TEEEEEETTTCCEE---EEEE-CCCCEE-EEEEC-SSSCEEEEEESTTCEEEEE
T ss_pred eeEcCCCCEEEEE---ecCC------CeEEEEeCccccee---eeEE-ccCCcc-eEEEc-CCCCEEEEEeCCCCeEEEE
Confidence 3567777765443 3455 78999999998862 1222 123334 89998 8998655544 58999999
Q ss_pred eCCCCeE-EEEec-CCcEEE-EEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEE
Q 016446 129 DLKNYTM-LYSIS-DKHVQE-IKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVK 204 (389)
Q Consensus 129 dl~~g~~-l~tl~-~~~V~~-vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~ 204 (389)
|+.+++. ...+. +..... ++|+ +|++|+++...+...+|++||+.+|++++++..+ .....++|+ |++.+++++
T Consensus 68 d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~s-pdg~~l~~~ 145 (331)
T 3u4y_A 68 ETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAIS-PNGNGLILI 145 (331)
T ss_dssp ECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEEC-TTSSCEEEE
T ss_pred ECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEEC-CCCCEEEEE
Confidence 9999987 66665 334444 9999 5787874322212229999999999999998854 456899998 778767665
Q ss_pred -eCCCc-EEEEECCCCeEE-----EEcccCCCceEEEEEcCCCcE-EEEEc-CCeEEEEeCC-CcE---EEEeccCcCCc
Q 016446 205 -QENEN-LQILDVRNAELM-----EVSRTEFMTPSAFIFLYENQL-FLTFR-NRTVAVWNFR-GEL---VTSFEDHLLWH 271 (389)
Q Consensus 205 -s~D~t-IklWd~~tg~~~-----~~l~gh~~~v~sv~fspdg~~-laS~s-D~tIklWd~~-G~~---l~tl~gh~~~~ 271 (389)
..+++ |++|++.....+ +.+ .+...+..++|+|||++ +++.. +++|++||++ |++ +.++..+..
T Consensus 146 ~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~-- 222 (331)
T 3u4y_A 146 DRSSANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNL-- 222 (331)
T ss_dssp EETTTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSC--
T ss_pred ecCCCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCC--
Confidence 56688 999998753332 222 33456899999999995 45556 9999999996 888 888876543
Q ss_pred CCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeE--EEEecCCCCCCCcccccCCCCCCCccccccc
Q 016446 272 PDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC--LAKINATNCSPKVDDELGSSSTGKSKKLNKS 349 (389)
Q Consensus 272 ~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~--l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~ 349 (389)
+..++|||||++|+.++.. +++|.+||+.+|++ +.++..+-..
T Consensus 223 ----~~~~~~spdg~~l~v~~~~----------~~~i~~~d~~~~~~~~~~~~~~~~~~--------------------- 267 (331)
T 3u4y_A 223 ----PGTIVVSRDGSTVYVLTES----------TVDVFNFNQLSGTLSFVKSFGHGLLI--------------------- 267 (331)
T ss_dssp ----CCCEEECTTSSEEEEECSS----------EEEEEEEETTTTEEEEEEEEECCCCC---------------------
T ss_pred ----CceEEECCCCCEEEEEEcC----------CCEEEEEECCCCceeeeccccccccc---------------------
Confidence 4799999999988766532 57899999999998 6666544100
Q ss_pred cceecccccccCCEEEEEECCCCCEEEEec-CCCcEEEccC
Q 016446 350 SYIRSTVGEALEDITSLFYDEERNEIYTGN-RHGLVHVWSN 389 (389)
Q Consensus 350 ~~~~~~~~~~~~~V~svafSpdg~~LaSgs-~D~tIrlW~~ 389 (389)
.+.....+.+++|||||++|+.++ .+++|++||.
T Consensus 268 ------~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 302 (331)
T 3u4y_A 268 ------DPRPLFGANQMALNKTETKLFISANISRELKVFTI 302 (331)
T ss_dssp ------CCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEET
T ss_pred ------CCCCcccccceEECCCCCEEEEecCCCCcEEEEEe
Confidence 000002335689999999886555 5679999984
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.97 E-value=8.4e-28 Score=226.79 Aligned_cols=277 Identities=9% Similarity=0.049 Sum_probs=194.2
Q ss_pred cEEEEE-ecCceEEEEecc-cc--eeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEec--cCC
Q 016446 14 DIVFAL-AHSGVCAAFSRE-TN--RRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIR--RGK 87 (389)
Q Consensus 14 ~~~a~~-~~~gtiklW~~~-tg--~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~--~g~ 87 (389)
++++++ +.+++|++|+++ +| +.+..+. + ...+.+++|+|+|+.|++++ ..+ ..+.+|++. .|+
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~spdg~~l~~~~---~~~------~~v~~~~~~~~~~~ 73 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVD-V-PGQVQPMVVSPDKRYLYVGV---RPE------FRVLAYRIAPDDGA 73 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-C-SSCCCCEEECTTSSEEEEEE---TTT------TEEEEEEECTTTCC
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEe-c-CCCCceEEECCCCCEEEEee---cCC------CeEEEEEecCCCCc
Confidence 444444 789999999984 45 4455554 2 36789999999999988864 234 578889886 565
Q ss_pred CCCcceeEeeecccCceeEEEecCCCeEEEEec-CCCeEEEEeCC---CCeEEEEec-CCcEEEEEEc-CCceEEEEecC
Q 016446 88 PDSGFALFESESLKWPGFVEFDDVNGKVLTYSA-QDSIYKVFDLK---NYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRS 161 (389)
Q Consensus 88 ~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s-~D~tiklWdl~---~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~ 161 (389)
+ ..+........+..++|+ |||++|+.++ .+++|++||+. +++++..+. ...+.+++|+ +|++|++++
T Consensus 74 ~---~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~-- 147 (343)
T 1ri6_A 74 L---TFAAESALPGSLTHISTD-HQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPA-- 147 (343)
T ss_dssp E---EEEEEEECSSCCSEEEEC-TTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEE--
T ss_pred e---eeccccccCCCCcEEEEc-CCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEec--
Confidence 4 112222222367889998 8999776554 58999999994 445556665 3578999999 577787764
Q ss_pred CCCeeEEEEEcCC-CeEEE----EEee-cCCceeEEEEEecCCCeEEEEe-CCCcEEEEECC--CCeE--EEEc---c-c
Q 016446 162 SSHVPLKILSIED-GTVLK----VFYH-LLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVR--NAEL--MEVS---R-T 226 (389)
Q Consensus 162 s~d~tiklWd~~t-G~~l~----tl~~-~~~~~~~v~f~~~~~~~l~~~s-~D~tIklWd~~--tg~~--~~~l---~-g 226 (389)
..+++|++||+.+ |+... .+.. .......++|+ |++.++++++ .+++|++||+. +|+. ++.+ . +
T Consensus 148 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~ 226 (343)
T 1ri6_A 148 LKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFH-PNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPEN 226 (343)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTT
T ss_pred CCCCEEEEEEecCCCceeeecccccccCCCCCcceEEEC-CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcc
Confidence 2357999999998 76643 2332 22356789997 7788777655 89999999994 4543 2222 2 2
Q ss_pred C--CCceEEEEEcCCCcEEE-EEc-CCeEEEEeCC--C---cEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCc
Q 016446 227 E--FMTPSAFIFLYENQLFL-TFR-NRTVAVWNFR--G---ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPE 297 (389)
Q Consensus 227 h--~~~v~sv~fspdg~~la-S~s-D~tIklWd~~--G---~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~ 297 (389)
| ...+..++|+|||++|+ +.. |++|++||++ + +.+..+..+.. +..++|+|||++|+.++.+
T Consensus 227 ~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~~~~~--- 297 (343)
T 1ri6_A 227 FSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ------PRGFNVDHSGKYLIAAGQK--- 297 (343)
T ss_dssp CCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS------CCCEEECTTSSEEEEECTT---
T ss_pred ccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc------cceEEECCCCCEEEEecCC---
Confidence 1 34677899999998776 555 9999999986 2 34555655443 4789999999999988643
Q ss_pred ccccCCCCCeEEEE--eCCCCeE--EEEecC
Q 016446 298 DQWMEGSAGSINVS--SILTGKC--LAKINA 324 (389)
Q Consensus 298 ~~~~~s~D~tIklW--d~~tg~~--l~tl~g 324 (389)
|++|++| |..+|+. +..+..
T Consensus 298 -------~~~v~v~~~d~~~g~~~~~~~~~~ 321 (343)
T 1ri6_A 298 -------SHHISVYEIVGEQGLLHEKGRYAV 321 (343)
T ss_dssp -------TCEEEEEEEETTTTEEEEEEEEEC
T ss_pred -------CCeEEEEEEcCCCceeeEcccccc
Confidence 5899999 5557754 444443
No 143
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.97 E-value=2.8e-29 Score=259.49 Aligned_cols=276 Identities=11% Similarity=-0.013 Sum_probs=201.8
Q ss_pred ceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCC
Q 016446 33 NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVN 112 (389)
Q Consensus 33 g~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pd 112 (389)
.++++++...+...|++|+|+|||++||+++. .| .+++||++..|+. ..+.. .....+.+++|| ||
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~DG~~la~~s~---~~------g~~~lw~~~~g~~---~~lt~-~~~~~~~~~~~s-pd 75 (582)
T 3o4h_A 10 SRIVRDVERLIAVEKYSLQGVVDGDKLLVVGF---SE------GSVNAYLYDGGET---VKLNR-EPINSVLDPHYG-VG 75 (582)
T ss_dssp HHHHHHHHHHHHSCEEEEEEEETTTEEEEEEE---ET------TEEEEEEEETTEE---EECCS-SCCSEECEECTT-CS
T ss_pred HHHHHHHHHHhccchheeecCCCCCeEEEEEc---cC------CceeEEEEcCCCc---Eeeec-ccccccccccCC-CC
Confidence 34555555444568999999999999999763 25 5778899866653 22211 121345679998 88
Q ss_pred CeEEEEecC---CCeEEEEeCC---CCeEEEEec-CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeec
Q 016446 113 GKVLTYSAQ---DSIYKVFDLK---NYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHL 184 (389)
Q Consensus 113 G~~Las~s~---D~tiklWdl~---~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~ 184 (389)
++|++++. +...+||.+. +|... .+. ...+...+|| +|+.++..+ .+.|.+ .|||+.+|++.+...++
T Consensus 76 -~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s-~~~~~~-~l~d~~~g~~~~l~~~~ 151 (582)
T 3o4h_A 76 -RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTG-ATEDRV-ALYALDGGGLRELARLP 151 (582)
T ss_dssp -EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEE-ECSSCE-EEEEEETTEEEEEEEES
T ss_pred -eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCCCceeeeeCCCCCeEEEEe-cCCCCc-eEEEccCCcEEEeecCC
Confidence 88887775 6677787653 34433 343 3334455677 444332221 233344 49999999887766543
Q ss_pred CCceeEEEEEecCCCeEEEEeCC----CcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CC--eEEEEeCC
Q 016446 185 LHRNKKVDFIEQFNEKLLVKQEN----ENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NR--TVAVWNFR 257 (389)
Q Consensus 185 ~~~~~~v~f~~~~~~~l~~~s~D----~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~--tIklWd~~ 257 (389)
. .+++|+ |||..|++++.| .+|++||+.+|++. .+.+|...+..++|||||+.|+++. |+ +|++||++
T Consensus 152 ~---~~~~~s-pDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~ 226 (582)
T 3o4h_A 152 G---FGFVSD-IRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPR 226 (582)
T ss_dssp S---CEEEEE-EETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTT
T ss_pred C---ceEEEC-CCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCC
Confidence 2 899998 789999987766 88999999999876 5688999999999999999999776 88 99999997
Q ss_pred -CcEEEEeccCcCCcCCCCeeEEE--------ECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCC
Q 016446 258 -GELVTSFEDHLLWHPDCNTNNIY--------ITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCS 328 (389)
Q Consensus 258 -G~~l~tl~gh~~~~~~~~v~sv~--------fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~ 328 (389)
|++. .+.+|... +.+++ |||||+++++++.| ++++||++ |+++.+ +.
T Consensus 227 ~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~spdg~~~~~~~~~-----------g~~~l~~~--g~~~~~---~~-- 282 (582)
T 3o4h_A 227 DGSVE-DLELPSKD-----FSSYRPTAITWLGYLPDGRLAVVARRE-----------GRSAVFID--GERVEA---PQ-- 282 (582)
T ss_dssp TCCEE-ECCCSCSH-----HHHHCCSEEEEEEECTTSCEEEEEEET-----------TEEEEEET--TEEECC---CS--
T ss_pred CCcEE-EccCCCcC-----hhhhhhccccceeEcCCCcEEEEEEcC-----------CcEEEEEE--CCeecc---CC--
Confidence 7777 88888754 56677 99999999998765 89999998 887652 22
Q ss_pred CCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCc---EEEcc
Q 016446 329 PKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGL---VHVWS 388 (389)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~t---IrlW~ 388 (389)
..|.+++|| ||+++++++.+.+ +.+|+
T Consensus 283 --------------------------------~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 283 --------------------------------GNHGRVVLW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp --------------------------------SEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred --------------------------------CceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence 368899999 9999999998865 55554
No 144
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.96 E-value=1.8e-27 Score=224.00 Aligned_cols=250 Identities=10% Similarity=0.070 Sum_probs=193.7
Q ss_pred eeeeEeEeccCCCCCcceeEeeeccc---CceeEEEecCCCeE-EEEecCCCeEEEEeCCCCeEEEEec-CC------cE
Q 016446 76 RSTKIEYIRRGKPDSGFALFESESLK---WPGFVEFDDVNGKV-LTYSAQDSIYKVFDLKNYTMLYSIS-DK------HV 144 (389)
Q Consensus 76 ~~~~l~~i~~g~~~~~~~l~~~~~~~---~~~~v~Fs~pdG~~-Las~s~D~tiklWdl~~g~~l~tl~-~~------~V 144 (389)
..+.+||+.+|++ +.....-. .+..++|+ |||+. +++++.+++|++||+.+++.+.++. .. .+
T Consensus 11 ~~v~~~d~~~~~~-----~~~~~~~~~~~~~~~~~~s-~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 84 (337)
T 1pby_B 11 DKLVVIDTEKMAV-----DKVITIADAGPTPMVPMVA-PGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSL 84 (337)
T ss_dssp TEEEEEETTTTEE-----EEEEECTTCTTCCCCEEEC-TTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECT
T ss_pred CeEEEEECCCCcE-----EEEEEcCCCCCCccceEEc-CCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccc
Confidence 7889999888875 22212222 47789998 89965 5677788999999999999887765 23 67
Q ss_pred EEEEEc-CCceEEEEecC-----C----CCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEE
Q 016446 145 QEIKIS-PGIMLLIFNRS-----S----SHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILD 214 (389)
Q Consensus 145 ~~vafS-~g~~la~~~~~-----s----~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd 214 (389)
.+++|+ +|++|+++... . .++.|++||+.+++.+..+.. ......++|+ |++.+++++ ++.|++||
T Consensus 85 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s-~dg~~l~~~--~~~i~~~d 160 (337)
T 1pby_B 85 FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWA-RDGSKLYGL--GRDLHVMD 160 (337)
T ss_dssp TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEEC-TTSSCEEEE--SSSEEEEE
T ss_pred cceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEEC-CCCCEEEEe--CCeEEEEE
Confidence 889999 57788777421 0 357999999999999998874 3567889997 778778777 78999999
Q ss_pred CCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc--CC-----------------------eEEEEeCC-CcEE-EEeccC
Q 016446 215 VRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR--NR-----------------------TVAVWNFR-GELV-TSFEDH 267 (389)
Q Consensus 215 ~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s--D~-----------------------tIklWd~~-G~~l-~tl~gh 267 (389)
+++++++..+..+.. ...++|+|||+.|+... ++ .|.+||+. +++. ..+..|
T Consensus 161 ~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 239 (337)
T 1pby_B 161 PEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM 239 (337)
T ss_dssp TTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred CCCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCC
Confidence 999999887765541 11337899999775553 44 46899997 7764 234444
Q ss_pred cCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccc
Q 016446 268 LLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLN 347 (389)
Q Consensus 268 ~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~ 347 (389)
... +.+++|+|||++|+++ + ++|++||+.+++.+..+..+.
T Consensus 240 ~~~-----~~~~~~s~dg~~l~~~--~-----------~~v~~~d~~~~~~~~~~~~~~--------------------- 280 (337)
T 1pby_B 240 DVF-----YFSTAVNPAKTRAFGA--Y-----------NVLESFDLEKNASIKRVPLPH--------------------- 280 (337)
T ss_dssp SSC-----EEEEEECTTSSEEEEE--E-----------SEEEEEETTTTEEEEEEECSS---------------------
T ss_pred CCc-----eeeEEECCCCCEEEEe--C-----------CeEEEEECCCCcCcceecCCC---------------------
Confidence 432 6899999999999987 2 799999999999998887543
Q ss_pred cccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 348 KSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 348 ~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
.+.+++|+|||+.|++++.|++|++||.
T Consensus 281 --------------~~~~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 281 --------------SYYSVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp --------------CCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred --------------ceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence 6788999999999999999999999983
No 145
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.96 E-value=4.6e-28 Score=221.95 Aligned_cols=257 Identities=10% Similarity=0.048 Sum_probs=191.4
Q ss_pred eeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCC-CeEEEEecC---CcEEEEEEc-
Q 016446 76 RSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN-YTMLYSISD---KHVQEIKIS- 150 (389)
Q Consensus 76 ~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~-g~~l~tl~~---~~V~~vafS- 150 (389)
.++++|++..|+. ..+.. +...+.+++|+ |||++||+++ ++.|++||+.+ +++...... ..|.+++||
T Consensus 22 ~~i~~~d~~~~~~---~~~~~--~~~~v~~~~~s-pdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 22 SSIEIFNIRTRKM---RVVWQ--TPELFEAPNWS-PDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp EEEEEEETTTTEE---EEEEE--ESSCCEEEEEC-TTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred eeEEEEeCCCCce---eeecc--CCcceEeeEEC-CCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 8899999988875 23333 44567889998 9999999987 88999999998 887655542 578999999
Q ss_pred CCceEEEEecCC-CCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEE-EEeCCCcEEEEEC--CCCeEEEEccc
Q 016446 151 PGIMLLIFNRSS-SHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLL-VKQENENLQILDV--RNAELMEVSRT 226 (389)
Q Consensus 151 ~g~~la~~~~~s-~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~-~~s~D~tIklWd~--~tg~~~~~l~g 226 (389)
+|++|+++.... ....|.+|++.+++ .+.+..+ ..+..++|+ |++..++ +++.|++++||++ .+++ ...+..
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~s-pdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~ 170 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWS-PDGKSFTYCGIRDQVFDIYSMDIDSGV-ETRLTH 170 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEEC-TTSSEEEEEEEETTEEEEEEEETTTCC-EEECCC
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEEC-CCCCEEEEEECCCCceEEEEEECCCCc-ceEccc
Confidence 688888775221 12344445556655 4555544 447888997 7888888 4679999999995 3444 456677
Q ss_pred CCCceEEEEEcCCCcEEEEE-c-CCeEEEEeC--CCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccC
Q 016446 227 EFMTPSAFIFLYENQLFLTF-R-NRTVAVWNF--RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWME 302 (389)
Q Consensus 227 h~~~v~sv~fspdg~~laS~-s-D~tIklWd~--~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~ 302 (389)
|...+..++|+|||++|+.+ . |+.++||++ .++.+..+..|... +..++|||||++|+.++.+..+.....
T Consensus 171 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~~~~~~~~~~ 245 (297)
T 2ojh_A 171 GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYG-----DWFPHPSPSGDKVVFVSYDADVFDHPR 245 (297)
T ss_dssp SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEE-----EEEEEECTTSSEEEEEEEETTCCSCCS
T ss_pred CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcc-----cCCeEECCCCCEEEEEEcCCCCCcccc
Confidence 88899999999999987765 4 899999997 47778888888754 789999999999999876410000000
Q ss_pred CCCCeEEEEeCCCCeE--EEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecC
Q 016446 303 GSAGSINVSSILTGKC--LAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNR 380 (389)
Q Consensus 303 s~D~tIklWd~~tg~~--l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~ 380 (389)
..++.|++||+.+++. +..+.+|. ..|.+++|||||+.|++++.
T Consensus 246 ~~~~~l~~~d~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 246 DLDVRVQLMDMDGGNVETLFDLFGGQ----------------------------------GTMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp SEEEEEEEEETTSCSCEEEEEEEEST----------------------------------TTSCSCCBCTTSSEEEEEEE
T ss_pred cCceEEEEEecCCCCceeeeccCCCC----------------------------------cccccceECCCCCEEEEEEe
Confidence 0125799999998876 55555776 47888999999999999987
Q ss_pred CC
Q 016446 381 HG 382 (389)
Q Consensus 381 D~ 382 (389)
|.
T Consensus 292 ~~ 293 (297)
T 2ojh_A 292 FP 293 (297)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 146
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.96 E-value=3e-29 Score=264.82 Aligned_cols=318 Identities=10% Similarity=-0.001 Sum_probs=222.7
Q ss_pred EEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcc---eEEEEEEeeCCCEEEEEEEeec-----CCCcceeeee
Q 016446 8 EIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDE---VIRSLFYNKNNDSLITVSVYAS-----DNFSSLKCRS 77 (389)
Q Consensus 8 ~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~---~v~sv~~spdg~~l~s~s~~~~-----~d~~~l~~~~ 77 (389)
++.|+ +++++ .+.|++|++|+..+|++...+.++. . .|.+++|||||+.|++++...+ .+ .+
T Consensus 20 ~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~------~~ 91 (719)
T 1z68_A 20 FPNWISGQEYLH-QSADNNIVLYNIETGQSYTILSNRT-MKSVNASNYGLSPDRQFVYLESDYSKLWRYSYT------AT 91 (719)
T ss_dssp CCEESSSSEEEE-ECTTSCEEEEESSSCCEEEEECHHH-HHTTTCSEEEECTTSSEEEEEEEEEECSSSCEE------EE
T ss_pred ccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEcccc-ccccceeeEEECCCCCeEEEEecCceeEEeecc------eE
Confidence 45666 65555 4569999999999999887776542 2 3899999999999999775331 24 78
Q ss_pred eeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec-C--CcE----------
Q 016446 78 TKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-D--KHV---------- 144 (389)
Q Consensus 78 ~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~-~--~~V---------- 144 (389)
+++|++.+|+......+ ...+..++|| |||+.||+++ |++|++||+.+|++..... + ..|
T Consensus 92 i~~~d~~~g~~~~~~~l-----~~~~~~~~~S-PDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ 164 (719)
T 1z68_A 92 YYIYDLSNGEFVRGNEL-----PRPIQYLCWS-PVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYE 164 (719)
T ss_dssp EEEEETTTTEECCSSCC-----CSSBCCEEEC-SSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHH
T ss_pred EEEEECCCCccccceec-----CcccccceEC-CCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceee
Confidence 99999988875211222 1345679998 9999999986 7899999999988754332 2 223
Q ss_pred -------EEEEEc-CCceEEEEecCC-------------------------------CCeeEEEEEcCCCeEE-------
Q 016446 145 -------QEIKIS-PGIMLLIFNRSS-------------------------------SHVPLKILSIEDGTVL------- 178 (389)
Q Consensus 145 -------~~vafS-~g~~la~~~~~s-------------------------------~d~tiklWd~~tG~~l------- 178 (389)
.+++|| ||++||+++.+. ...+|++||+.+|+++
T Consensus 165 ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 244 (719)
T 1z68_A 165 EEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPV 244 (719)
T ss_dssp HHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCC
T ss_pred eecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccC
Confidence 489999 689998876442 2238999999998863
Q ss_pred -EEEeecCCceeEEEEEecCCCeEEEE-e--CC--CcEEEEE----CCCCeEEEEc----ccCCCceE-----EEEEcCC
Q 016446 179 -KVFYHLLHRNKKVDFIEQFNEKLLVK-Q--EN--ENLQILD----VRNAELMEVS----RTEFMTPS-----AFIFLYE 239 (389)
Q Consensus 179 -~tl~~~~~~~~~v~f~~~~~~~l~~~-s--~D--~tIklWd----~~tg~~~~~l----~gh~~~v~-----sv~fspd 239 (389)
..+.+|.+.+..++|+ ||+ ++++. . .+ ..|.+|| +.+|++...+ .+|..++. .++|+||
T Consensus 245 ~~~~~~~~~~~~~~~~S-pD~-~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spd 322 (719)
T 1z68_A 245 PAMIASSDYYFSWLTWV-TDE-RVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYD 322 (719)
T ss_dssp CHHHHTSCEEEEEEEES-SSS-EEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTT
T ss_pred CccCCCCcceEEEeEEe-CCC-eEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCC
Confidence 1233566778999998 664 55553 2 22 3588899 9999998877 58888887 8999999
Q ss_pred CcEEEE--Ec-CC--eEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCC
Q 016446 240 NQLFLT--FR-NR--TVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL 314 (389)
Q Consensus 240 g~~laS--~s-D~--tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~ 314 (389)
|+.|+. +. |+ .|.+||+.+...+.|..+... |..+.|+ ||+.|+..+.+. +..+++++||.+.
T Consensus 323 g~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~-----v~~~~~~-d~~~i~~~~~~~------~~~~~~~~l~~~~ 390 (719)
T 1z68_A 323 AISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWE-----AINIFRV-TQDSLFYSSNEF------EEYPGRRNIYRIS 390 (719)
T ss_dssp SSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSC-----EEEEEEE-CSSEEEEEESCG------GGCTTCBEEEEEE
T ss_pred CCeEEEEEEccCCceEEEEEECCCCceEecccCceE-----EEEEEEE-eCCEEEEEEecC------CCCCceEEEEEEe
Confidence 996543 43 55 677778874336677765432 6788888 888887765320 0014789999875
Q ss_pred C--CeE-EEEec----CCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEE-ecCC--CcE
Q 016446 315 T--GKC-LAKIN----ATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYT-GNRH--GLV 384 (389)
Q Consensus 315 t--g~~-l~tl~----gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaS-gs~D--~tI 384 (389)
. |+. ...|. +|. ..+..+.|||||+.|+. ++.+ .++
T Consensus 391 ~~~g~~~~~~l~~~~~~~~----------------------------------~~~~~~~~s~dg~~l~~~~s~~~~p~~ 436 (719)
T 1z68_A 391 IGSYPPSKKCVTCHLRKER----------------------------------CQYYTASFSDYAKYYALVCYGPGIPIS 436 (719)
T ss_dssp CSSSSCCEEESSTTTTTTT----------------------------------BCBEEEEECGGGSSEEEEECCBSSCEE
T ss_pred CCCCCCCceeccCccCCCC----------------------------------CceEEEEECCCCCEEEEEcCCCCCCeE
Confidence 3 421 23333 243 47889999999998874 4433 456
Q ss_pred EEcc
Q 016446 385 HVWS 388 (389)
Q Consensus 385 rlW~ 388 (389)
.+||
T Consensus 437 ~l~d 440 (719)
T 1z68_A 437 TLHD 440 (719)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 6765
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=7.6e-27 Score=220.22 Aligned_cols=257 Identities=13% Similarity=0.125 Sum_probs=186.8
Q ss_pred eeeeEeEec-cCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCC-CeEEEEeCC--CCe--EEEEec-CCcEEEEE
Q 016446 76 RSTKIEYIR-RGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD-SIYKVFDLK--NYT--MLYSIS-DKHVQEIK 148 (389)
Q Consensus 76 ~~~~l~~i~-~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D-~tiklWdl~--~g~--~l~tl~-~~~V~~va 148 (389)
..+++|++. .|+. ..+....+...+..++|+ |||++|++++.+ ++|++|++. +++ .+..+. ...+..++
T Consensus 15 ~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (343)
T 1ri6_A 15 QQIHVWNLNHEGAL---TLTQVVDVPGQVQPMVVS-PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHIS 90 (343)
T ss_dssp TEEEEEEECTTSCE---EEEEEEECSSCCCCEEEC-TTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEE
T ss_pred CeEEEEEECCCCcE---EEeeeEecCCCCceEEEC-CCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEE
Confidence 788899984 4442 122222344567789998 899988888876 999999997 666 344554 35789999
Q ss_pred Ec-CCceEEEEecCCCCeeEEEEEc---CCCeEEEEEeecCCceeEEEEEecCCCeEEEEe-CCCcEEEEECCC-CeEEE
Q 016446 149 IS-PGIMLLIFNRSSSHVPLKILSI---EDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRN-AELME 222 (389)
Q Consensus 149 fS-~g~~la~~~~~s~d~tiklWd~---~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s-~D~tIklWd~~t-g~~~~ 222 (389)
|+ +|++|++++. .+++|++||+ .+++.+..+..+ ..+..++|+ |++..+++++ .|++|++||+.+ ++...
T Consensus 91 ~s~dg~~l~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s-~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 91 TDHQGQFVFVGSY--NAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANIS-PDNRTLWVPALKQDRICLFTVSDDGHLVA 166 (343)
T ss_dssp ECTTSSEEEEEET--TTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEEC-TTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred EcCCCCEEEEEec--CCCeEEEEECCCCccccccccccCC-CCceEEEEC-CCCCEEEEecCCCCEEEEEEecCCCceee
Confidence 99 5777877643 3579999999 555666776644 457889998 7788888877 999999999998 76542
Q ss_pred ----Eccc-CCCceEEEEEcCCCcEEE-EEc-CCeEEEEeCC---CcE--EEEec----cCcCCcCCCCeeEEEECCCCC
Q 016446 223 ----VSRT-EFMTPSAFIFLYENQLFL-TFR-NRTVAVWNFR---GEL--VTSFE----DHLLWHPDCNTNNIYITSDQD 286 (389)
Q Consensus 223 ----~l~g-h~~~v~sv~fspdg~~la-S~s-D~tIklWd~~---G~~--l~tl~----gh~~~~~~~~v~sv~fSpdG~ 286 (389)
.+.. ....+..++|+|||++|+ ++. +++|++|+++ |++ +..+. +|... ..+..++|+|||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~i~~s~dg~ 243 (343)
T 1ri6_A 167 QDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDT---RWAADIHITPDGR 243 (343)
T ss_dssp EEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSC---CCEEEEEECTTSS
T ss_pred ecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcccccc---CCccceEECCCCC
Confidence 2222 345788999999999664 555 9999999983 443 33332 11111 1256899999999
Q ss_pred EEEEEecCCCcccccCCCCCeEEEEeCC--C--CeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCC
Q 016446 287 LIISYCKAEPEDQWMEGSAGSINVSSIL--T--GKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALED 362 (389)
Q Consensus 287 ~laS~s~D~~~~~~~~s~D~tIklWd~~--t--g~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (389)
+|+.+.. .|++|++||+. + .+.+..+..+. .
T Consensus 244 ~l~v~~~----------~~~~i~v~d~~~~~~~~~~~~~~~~~~-----------------------------------~ 278 (343)
T 1ri6_A 244 HLYACDR----------TASLITVFSVSEDGSVLSKEGFQPTET-----------------------------------Q 278 (343)
T ss_dssp EEEEEET----------TTTEEEEEEECTTSCCEEEEEEEECSS-----------------------------------S
T ss_pred EEEEEec----------CCCEEEEEEEcCCCCceEEeeeecCCC-----------------------------------c
Confidence 8885543 35899999998 3 34566665543 4
Q ss_pred EEEEEECCCCCEEEEec-CCCcEEEcc
Q 016446 363 ITSLFYDEERNEIYTGN-RHGLVHVWS 388 (389)
Q Consensus 363 V~svafSpdg~~LaSgs-~D~tIrlW~ 388 (389)
+.+++|+|||++|+.++ .|++|++|+
T Consensus 279 ~~~~~~s~dg~~l~~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 279 PRGFNVDHSGKYLIAAGQKSHHISVYE 305 (343)
T ss_dssp CCCEEECTTSSEEEEECTTTCEEEEEE
T ss_pred cceEEECCCCCEEEEecCCCCeEEEEE
Confidence 77899999999888888 689999994
No 148
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.96 E-value=7.2e-28 Score=248.88 Aligned_cols=279 Identities=14% Similarity=0.065 Sum_probs=206.5
Q ss_pred cccEEEEEee--ccEEEEEec-CceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeee
Q 016446 3 RTKVIEIVAA--RDIVFALAH-SGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 79 (389)
Q Consensus 3 ~~~v~~i~~~--~~~~a~~~~-~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~ 79 (389)
+..|..|.|+ |++||.++. ||+++||++++|++ +.+..++...|++++|||| +.|++++..++++ ..+
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~-------~~~ 91 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET-VKLNREPINSVLDPHYGVG-RVILVRDVSKGAE-------QHA 91 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE-EECCSSCCSEECEECTTCS-EEEEEEECSTTSC-------CEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc-EeeecccccccccccCCCC-eEEEEeccCCCCc-------ceE
Confidence 3468999999 899999887 99999999975555 5566665468999999999 6555543222232 334
Q ss_pred EeEec---cCCCCCcceeEeeecccCceeEEEecCCC--eEEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEEEc-CCc
Q 016446 80 IEYIR---RGKPDSGFALFESESLKWPGFVEFDDVNG--KVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKIS-PGI 153 (389)
Q Consensus 80 l~~i~---~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG--~~Las~s~D~tiklWdl~~g~~l~tl~~~~V~~vafS-~g~ 153 (389)
||.+. .|+. ..+.. .......+|+ ||| .++++++.|+++ |||+++|++........ .+++|| ||+
T Consensus 92 l~~~~~~~~g~~---~~l~~---~~~~~~~~~s-~dg~~~~~~s~~~~~~~-l~d~~~g~~~~l~~~~~-~~~~~spDG~ 162 (582)
T 3o4h_A 92 LFKVNTSRPGEE---QRLEA---VKPMRILSGV-DTGEAVVFTGATEDRVA-LYALDGGGLRELARLPG-FGFVSDIRGD 162 (582)
T ss_dssp EEEEETTSTTCC---EECTT---SCSBEEEEEE-ECSSCEEEEEECSSCEE-EEEEETTEEEEEEEESS-CEEEEEEETT
T ss_pred EEEEeccCCCcc---ccccC---CCCceeeeeC-CCCCeEEEEecCCCCce-EEEccCCcEEEeecCCC-ceEEECCCCC
Confidence 55443 3332 11211 1112345776 666 467777777766 99999998755444333 899999 699
Q ss_pred eEEEEecCCC-CeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCC--cEEEEECCCCeEEEEcccCCCc
Q 016446 154 MLLIFNRSSS-HVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENE--NLQILDVRNAELMEVSRTEFMT 230 (389)
Q Consensus 154 ~la~~~~~s~-d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~--tIklWd~~tg~~~~~l~gh~~~ 230 (389)
+||+++.+.. ..+|++||+.+|++. +|..|.+.+..++|+ ||+..|+++..|+ +|++||+.+|++. .+.+|...
T Consensus 163 ~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~S-pDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~ 239 (582)
T 3o4h_A 163 LIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASIS-PGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKD 239 (582)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEEC-TTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSH
T ss_pred EEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceEC-CCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcC
Confidence 9986654422 278999999998865 778888889999998 8899999777888 9999999999998 88999988
Q ss_pred eEEEE--------EcCCCcEEEEEc-CCeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCccccc
Q 016446 231 PSAFI--------FLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWM 301 (389)
Q Consensus 231 v~sv~--------fspdg~~laS~s-D~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~ 301 (389)
+..++ |+|||+++++++ |++++||++ |++++++.+ . |.+++|| ||+++++++.+.
T Consensus 240 ~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~-g~~~~~~~~---~-----v~~~~~s-dg~~l~~~s~~~------ 303 (582)
T 3o4h_A 240 FSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID-GERVEAPQG---N-----HGRVVLW-RGKLVTSHTSLS------ 303 (582)
T ss_dssp HHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET-TEEECCCSS---E-----EEEEEEE-TTEEEEEEEETT------
T ss_pred hhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE-CCeeccCCC---c-----eEEEEec-CCEEEEEEcCCC------
Confidence 88888 999999999998 999999999 988764432 2 7899999 999999988752
Q ss_pred CCCCCeEEEEeCCCCeEEEEe
Q 016446 302 EGSAGSINVSSILTGKCLAKI 322 (389)
Q Consensus 302 ~s~D~tIklWd~~tg~~l~tl 322 (389)
.-..|.+||.. + .+..|
T Consensus 304 --~p~~l~~~d~~-~-~~~~l 320 (582)
T 3o4h_A 304 --TPPRIVSLPSG-E-PLLEG 320 (582)
T ss_dssp --EEEEEEEETTC-C-EEECC
T ss_pred --CCCeEEEEcCC-C-ceEEE
Confidence 22457777765 3 44444
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.96 E-value=1.1e-26 Score=244.41 Aligned_cols=286 Identities=12% Similarity=0.122 Sum_probs=208.1
Q ss_pred ccEEEEEee-ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeE
Q 016446 4 TKVIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEY 82 (389)
Q Consensus 4 ~~v~~i~~~-~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~ 82 (389)
..|..+.|+ .+.++.. .++++++||+.+|++.. +..+. ..+.+++|||||+.|+++ .+ .++++|+
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~-l~~~~-~~~~~~~~SpdG~~la~~-----~~------~~i~v~~ 147 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTY-LFDTN-EETASLDFSPVGDRVAYV-----RN------HNLYIAR 147 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEE-EECCT-TCCTTCEECTTSSEEEEE-----ET------TEEEEEE
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEE-ccCCc-ccccCCcCCCCCCEEEEE-----EC------CeEEEEe
Confidence 358889998 4444444 46999999998887665 44443 678999999999999884 34 6889999
Q ss_pred ecc-----CCCCCcceeEee-------------ecccCceeEEEecCCCeEEEEec------------------------
Q 016446 83 IRR-----GKPDSGFALFES-------------ESLKWPGFVEFDDVNGKVLTYSA------------------------ 120 (389)
Q Consensus 83 i~~-----g~~~~~~~l~~~-------------~~~~~~~~v~Fs~pdG~~Las~s------------------------ 120 (389)
+.. |+.. .+... +...++.+++|| |||++||+++
T Consensus 148 ~~~~~~~~g~~~---~~~~~~~~~~~~g~~~~~ee~~~~~~~~~S-pDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 223 (706)
T 2z3z_A 148 GGKLGEGMSRAI---AVTIDGTETLVYGQAVHQREFGIEKGTFWS-PKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPL 223 (706)
T ss_dssp CBCTTSCCCCCE---ESCSCCBTTEEESSCCGGGCTTCCCSEEEC-TTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEE
T ss_pred cCcccccCCCcE---EeccCCCCCeEcccchhhhhcCCCceEEEC-CCCCEEEEEEECCCCCceEEeeccCCCCCceEEe
Confidence 988 7752 11110 112234689998 9999999998
Q ss_pred ---------CCCeEEEEeCCCCeEEEEec----CCcEEEEEEc-CCceEEEEecCC--CCeeEEEEEcCCCeEEEEEe-e
Q 016446 121 ---------QDSIYKVFDLKNYTMLYSIS----DKHVQEIKIS-PGIMLLIFNRSS--SHVPLKILSIEDGTVLKVFY-H 183 (389)
Q Consensus 121 ---------~D~tiklWdl~~g~~l~tl~----~~~V~~vafS-~g~~la~~~~~s--~d~tiklWd~~tG~~l~tl~-~ 183 (389)
.+.+|++||++++++..... ...|.+++|| +|++|++++.+. .+.+|++||+.+|++++++. .
T Consensus 224 ~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~ 303 (706)
T 2z3z_A 224 YYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVE 303 (706)
T ss_dssp CCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred eCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEc
Confidence 45789999999998654432 3579999999 688888765332 23599999999995554443 2
Q ss_pred -cCCc---eeEEEEEec--CCCeEEEEeCCCcEEEEECC-CCeEEEEcccCCCceEE-EEEcCCCcEEEEEc--CC----
Q 016446 184 -LLHR---NKKVDFIEQ--FNEKLLVKQENENLQILDVR-NAELMEVSRTEFMTPSA-FIFLYENQLFLTFR--NR---- 249 (389)
Q Consensus 184 -~~~~---~~~v~f~~~--~~~~l~~~s~D~tIklWd~~-tg~~~~~l~gh~~~v~s-v~fspdg~~laS~s--D~---- 249 (389)
+... +..++|+ | ++..+++++.|++++||++. ++.+++.+.+|...+.. ++|+|||+.|+.++ ++
T Consensus 304 ~~~~~~~~~~~~~~s-p~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~ 382 (706)
T 2z3z_A 304 TDKHYVEPLHPLTFL-PGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLER 382 (706)
T ss_dssp ECSSCCCCCSCCEEC-TTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCB
T ss_pred cCCCeECccCCceee-cCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceE
Confidence 2221 3578998 6 77777778899999999987 78888889999888887 79999998876654 54
Q ss_pred eEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEe
Q 016446 250 TVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 322 (389)
Q Consensus 250 tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl 322 (389)
.|..||+++..++.+. |... +.+++|||||++|+..+.+ ....+.|++||+.+++ +..+
T Consensus 383 ~l~~~d~~~~~~~~l~-~~~~-----~~~~~~spdg~~l~~~~~~-------~~~p~~i~l~d~~~~~-~~~~ 441 (706)
T 2z3z_A 383 HFYCIDIKGGKTKDLT-PESG-----MHRTQLSPDGSAIIDIFQS-------PTVPRKVTVTNIGKGS-HTLL 441 (706)
T ss_dssp EEEEEETTCCCCEESC-CSSS-----EEEEEECTTSSEEEEEEEC-------SSCSCEEEEEESSSCE-EEEE
T ss_pred EEEEEEcCCCCceecc-CCCc-----eEEEEECCCCCEEEEEecC-------CCCCcEEEEEECCCCe-Eeec
Confidence 6666677633355565 4433 7899999999999987653 1223679999999888 4444
No 150
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.95 E-value=4.7e-26 Score=216.57 Aligned_cols=238 Identities=13% Similarity=0.106 Sum_probs=191.5
Q ss_pred cCceeEEEecCCCeEEEEecC-------CCeEEEEeCCCCeEEEEec-CCcEEEEEEc-CCceEEEEecCCCCeeEEEEE
Q 016446 101 KWPGFVEFDDVNGKVLTYSAQ-------DSIYKVFDLKNYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILS 171 (389)
Q Consensus 101 ~~~~~v~Fs~pdG~~Las~s~-------D~tiklWdl~~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~s~d~tiklWd 171 (389)
..+..++|+ |||++|+.++. +++|.+||+.+++.+.++. +..+.+++|+ +|++++++. ..+++|.+||
T Consensus 41 ~~~~~~~~s-~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~--~~~~~v~~~d 117 (353)
T 3vgz_A 41 KGAYEMAYS-QQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGN--TVNSAVTAID 117 (353)
T ss_dssp SSEEEEEEE-TTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEE--TTTTEEEEEE
T ss_pred cCccceEEC-CCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEe--cCCCEEEEEe
Confidence 346689998 89988777663 5799999999999888876 5668899999 577676664 3457999999
Q ss_pred cCCCeEEEEEeecCCc---------eeEEEEEecCCCeEEEEe--CCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCC
Q 016446 172 IEDGTVLKVFYHLLHR---------NKKVDFIEQFNEKLLVKQ--ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYEN 240 (389)
Q Consensus 172 ~~tG~~l~tl~~~~~~---------~~~v~f~~~~~~~l~~~s--~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg 240 (389)
+++|+.+.++..+... ...++|+ |+++++++++ .+++|.+||+++++.+..+..+...+..++|+|||
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVAD-DATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEE-TTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTT
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEEC-CCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCC
Confidence 9999999999854322 5779998 7788777765 58999999999999999988777778999999999
Q ss_pred cEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeE
Q 016446 241 QLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 318 (389)
Q Consensus 241 ~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~ 318 (389)
++|+.+. |+.|.+||.. ++.+..+....... ...+..++|+|||++|+.++.+ ++.|.+||+.+|+.
T Consensus 197 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~----------~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 197 KRLYTTNADGELITIDTADNKILSRKKLLDDGK-EHFFINISLDTARQRAFITDSK----------AAEVLVVDTRNGNI 265 (353)
T ss_dssp TEEEEECTTSEEEEEETTTTEEEEEEECCCSSS-CCCEEEEEEETTTTEEEEEESS----------SSEEEEEETTTCCE
T ss_pred CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCC-CcccceEEECCCCCEEEEEeCC----------CCEEEEEECCCCcE
Confidence 9999888 9999999996 88888776422110 0126789999999988877653 58999999999999
Q ss_pred EEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEE-EecCCCcEEEccC
Q 016446 319 LAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIY-TGNRHGLVHVWSN 389 (389)
Q Consensus 319 l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~La-Sgs~D~tIrlW~~ 389 (389)
+..+..+. . ..++|+|||+.|+ +...+++|.+||.
T Consensus 266 ~~~~~~~~-----------------------------------~-~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 266 LAKVAAPE-----------------------------------S-LAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp EEEEECSS-----------------------------------C-CCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEEEcCC-----------------------------------C-ceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 98887543 2 3589999999655 5557999999983
No 151
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=6.8e-27 Score=214.19 Aligned_cols=250 Identities=12% Similarity=0.001 Sum_probs=189.7
Q ss_pred EEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEecc-CCCCCcceeEe
Q 016446 18 ALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRR-GKPDSGFALFE 96 (389)
Q Consensus 18 ~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~-g~~~~~~~l~~ 96 (389)
..+.+++|++||..+|+... +..+ ...|.+++|+|||+.|+++ . + ..+.+|++.. ++. ..++.
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~-~~~~-~~~v~~~~~spdg~~l~~~----~-~------~~i~~~d~~~~~~~---~~~~~ 80 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRV-VWQT-PELFEAPNWSPDGKYLLLN----S-E------GLLYRLSLAGDPSP---EKVDT 80 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEE-EEEE-SSCCEEEEECTTSSEEEEE----E-T------TEEEEEESSSCCSC---EECCC
T ss_pred CCCcceeEEEEeCCCCceee-eccC-CcceEeeEECCCCCEEEEE----c-C------CeEEEEeCCCCCCc---eEecc
Confidence 35689999999998887764 4444 4789999999999999884 2 3 4788999988 765 22222
Q ss_pred eecccCceeEEEecCCCeEEEEec--CCCeEEEEeC--CCCeEEEEec-CCcEEEEEEc-CCceEEEEecCCCCeeEEEE
Q 016446 97 SESLKWPGFVEFDDVNGKVLTYSA--QDSIYKVFDL--KNYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRSSSHVPLKIL 170 (389)
Q Consensus 97 ~~~~~~~~~v~Fs~pdG~~Las~s--~D~tiklWdl--~~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~s~d~tiklW 170 (389)
......+..++|+ |||++|++++ .++.++||.+ .+++. ..+. ...+..++|| +|+.|+.+. +.|++++||
T Consensus 81 ~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~--~~~~~~~l~ 156 (297)
T 2ojh_A 81 GFATICNNDHGIS-PDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKNLPSYWHGWSPDGKSFTYCG--IRDQVFDIY 156 (297)
T ss_dssp TTCCCBCSCCEEC-TTSSEEEEEECTTTSSCEEEEEETTCCCC-EECCSSSSEEEEEECTTSSEEEEEE--EETTEEEEE
T ss_pred ccccccccceEEC-CCCCEEEEEEeCCCCcceEEEEECCCCce-EEeecCCCccceEECCCCCEEEEEE--CCCCceEEE
Confidence 1112345679998 9999999998 4456667665 45553 4443 4569999999 577777443 234688999
Q ss_pred Ec--CCCeEEEEEeecCCceeEEEEEecCCCeEEEEe-CCCcEEEEECC-CCeEEEEcccCCCceEEEEEcCCCcEEEEE
Q 016446 171 SI--EDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVR-NAELMEVSRTEFMTPSAFIFLYENQLFLTF 246 (389)
Q Consensus 171 d~--~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s-~D~tIklWd~~-tg~~~~~l~gh~~~v~sv~fspdg~~laS~ 246 (389)
++ .+++ ...+..|...+..++|+ |++..+++++ .|+.++||++. .+..+..+..|...+..++|+|||++|+.+
T Consensus 157 ~~~~~~~~-~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 234 (297)
T 2ojh_A 157 SMDIDSGV-ETRLTHGEGRNDGPDYS-PDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFV 234 (297)
T ss_dssp EEETTTCC-EEECCCSSSCEEEEEEC-TTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEE
T ss_pred EEECCCCc-ceEcccCCCccccceEC-CCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEE
Confidence 85 4554 45666677788999998 7788888766 69999999987 677778888899999999999999999988
Q ss_pred c-C-----------CeEEEEeCC-CcE--EEEeccCcCCcCCCCeeEEEECCCCCEEEEEecC
Q 016446 247 R-N-----------RTVAVWNFR-GEL--VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKA 294 (389)
Q Consensus 247 s-D-----------~tIklWd~~-G~~--l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D 294 (389)
+ | +.|.+||++ +++ +..+.+|... +..++|||||++|++++.|
T Consensus 235 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~-----~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 235 SYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGT-----MNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp EEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTT-----SCSCCBCTTSSEEEEEEEC
T ss_pred EcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcc-----cccceECCCCCEEEEEEec
Confidence 7 5 569999997 654 4555577765 6889999999999999876
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.95 E-value=4.2e-25 Score=211.98 Aligned_cols=274 Identities=10% Similarity=0.119 Sum_probs=190.2
Q ss_pred EEEEEe----cCceEEEEecc--cceeee-eeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCC
Q 016446 15 IVFALA----HSGVCAAFSRE--TNRRIC-FLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGK 87 (389)
Q Consensus 15 ~~a~~~----~~gtiklW~~~--tg~~l~-tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~ 87 (389)
.+++++ .++.+.+|.++ +|++.. ....+. .....++|+|||+ |+.++.. +.+ ..+.+|++..|+
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~-~~p~~~a~spdg~-l~~~~~~-~~~------~~v~~~~~~~g~ 74 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAAT-QNPTYLALSAKDC-LYSVDKE-DDE------GGIAAWQIDGQT 74 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEEC-SCCCCEEECTTCE-EEEEEEE-TTE------EEEEEEEEETTE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeecc-CCcceEEEccCCe-EEEEEec-CCC------ceEEEEEecCCc
Confidence 445553 35677787754 566543 222222 5677899999999 6665542 345 789999997776
Q ss_pred CCCcceeEe-eecccCceeEEEecCCCeEEEEec-CCCeEEEEeCC-CCe--EEEEecC-----------CcEEEEEEcC
Q 016446 88 PDSGFALFE-SESLKWPGFVEFDDVNGKVLTYSA-QDSIYKVFDLK-NYT--MLYSISD-----------KHVQEIKISP 151 (389)
Q Consensus 88 ~~~~~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s-~D~tiklWdl~-~g~--~l~tl~~-----------~~V~~vafS~ 151 (389)
. ..+.. ......|..++|+ |||++|++++ .+++|++|++. +|+ .+..+.. ..+.+++|+|
T Consensus 75 ~---~~~~~~~~~~~~p~~~a~s-pdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp 150 (347)
T 3hfq_A 75 A---HKLNTVVAPGTPPAYVAVD-EARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP 150 (347)
T ss_dssp E---EEEEEEEEESCCCSEEEEE-TTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT
T ss_pred E---EEeeeeecCCCCCEEEEEC-CCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC
Confidence 4 11222 2245567889998 9999888877 78999999995 444 3444421 2489999994
Q ss_pred -CceEEEEecCCCCeeEEEEEcC-CCeEEEE--Eeec-CCceeEEEEEecCCCeEEEE-eCCCcEEEEECCC--CeE--E
Q 016446 152 -GIMLLIFNRSSSHVPLKILSIE-DGTVLKV--FYHL-LHRNKKVDFIEQFNEKLLVK-QENENLQILDVRN--AEL--M 221 (389)
Q Consensus 152 -g~~la~~~~~s~d~tiklWd~~-tG~~l~t--l~~~-~~~~~~v~f~~~~~~~l~~~-s~D~tIklWd~~t--g~~--~ 221 (389)
|+ ++++. ..+++|++|++. +|++... +..+ ......++|+ |++.++++. ..+++|++|++.. |+. +
T Consensus 151 dg~-l~v~~--~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~s-pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~ 226 (347)
T 3hfq_A 151 DNR-LAVID--LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFS-PDGQYAFLAGELSSQIASLKYDTQTGAFTQL 226 (347)
T ss_dssp TSC-EEEEE--TTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEEEETTTTEEEEE
T ss_pred CCc-EEEEe--CCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEEC-CCCCEEEEEeCCCCEEEEEEecCCCCceEEe
Confidence 66 55553 345799999998 6765432 2322 2245779998 778867775 5889999999874 664 3
Q ss_pred EEcccCC------CceEEEEEcCCCcEE-EEEc-CCeEEEEeCC--C--cEEEEeccCcCCcCCCCeeEEEECCCCCEEE
Q 016446 222 EVSRTEF------MTPSAFIFLYENQLF-LTFR-NRTVAVWNFR--G--ELVTSFEDHLLWHPDCNTNNIYITSDQDLII 289 (389)
Q Consensus 222 ~~l~gh~------~~v~sv~fspdg~~l-aS~s-D~tIklWd~~--G--~~l~tl~gh~~~~~~~~v~sv~fSpdG~~la 289 (389)
..+.... ..+..++|+|||++| ++.. +++|++|+++ | +++.++..|... +..++|||||++|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~-----~~~~~~spdg~~l~ 301 (347)
T 3hfq_A 227 GIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDF-----PRDFDLDPTEAFVV 301 (347)
T ss_dssp EEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSC-----CCEEEECTTSSEEE
T ss_pred eeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCC-----cCeEEECCCCCEEE
Confidence 3333322 458999999999977 5556 9999999985 4 456667665543 58999999999999
Q ss_pred EEecCCCcccccCCCCCeEEEE--eCCCCeEEE
Q 016446 290 SYCKAEPEDQWMEGSAGSINVS--SILTGKCLA 320 (389)
Q Consensus 290 S~s~D~~~~~~~~s~D~tIklW--d~~tg~~l~ 320 (389)
+++.+ +++|++| |..+|++..
T Consensus 302 v~~~~----------~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 302 VVNQN----------TDNATLYARDLTSGKLSL 324 (347)
T ss_dssp EEETT----------TTEEEEEEECTTTCCEEE
T ss_pred EEEcC----------CCcEEEEEEeCCCCeEEe
Confidence 98765 4899999 667788653
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.95 E-value=1.3e-25 Score=215.45 Aligned_cols=262 Identities=10% Similarity=0.124 Sum_probs=176.8
Q ss_pred eeeeEeEe--ccCCCCCcceeEeeecccCceeEEEecCCCeEEEEec--CCCeEEEEeCCCCeE--EEEe--cCCcEEEE
Q 016446 76 RSTKIEYI--RRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA--QDSIYKVFDLKNYTM--LYSI--SDKHVQEI 147 (389)
Q Consensus 76 ~~~~l~~i--~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s--~D~tiklWdl~~g~~--l~tl--~~~~V~~v 147 (389)
..+.+|.+ .+|++. .+-.......|..++|+ |||++++++. .+++|++||+.+++. +..+ +...+..+
T Consensus 16 ~~i~v~~~d~~tg~~~---~~~~~~~~~~p~~~a~s-pdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~ 91 (347)
T 3hfq_A 16 QGIYQGTLDTTAKTLT---NDGLLAATQNPTYLALS-AKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYV 91 (347)
T ss_dssp CEEEEEEEETTTTEEE---EEEEEEECSCCCCEEEC-TTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEE
T ss_pred CCEEEEEEcCCCCeEE---EeeeeeccCCcceEEEc-cCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEE
Confidence 55666666 456541 11112344567789998 8999444443 279999999988873 3443 35678899
Q ss_pred EEc-CCceEEEEecCCCCeeEEEEEcC-CCe--EEEEEeec---------CCceeEEEEEecCCCeEEEEeCCCcEEEEE
Q 016446 148 KIS-PGIMLLIFNRSSSHVPLKILSIE-DGT--VLKVFYHL---------LHRNKKVDFIEQFNEKLLVKQENENLQILD 214 (389)
Q Consensus 148 afS-~g~~la~~~~~s~d~tiklWd~~-tG~--~l~tl~~~---------~~~~~~v~f~~~~~~~l~~~s~D~tIklWd 214 (389)
+|| +|++|++++. .+++|++|++. +|+ .+..+... ..++..++|+ |++..+++...+++|++||
T Consensus 92 a~spdg~~l~~~~~--~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~s-pdg~l~v~~~~~~~v~~~~ 168 (347)
T 3hfq_A 92 AVDEARQLVYSANY--HKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLT-PDNRLAVIDLGSDKVYVYN 168 (347)
T ss_dssp EEETTTTEEEEEET--TTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEEC-TTSCEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEEeC--CCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEEC-CCCcEEEEeCCCCEEEEEE
Confidence 999 5888887753 45899999995 443 34444321 1246779998 6777443445789999999
Q ss_pred CC-CCeEEEE--ccc-CCCceEEEEEcCCCcEEEE-Ec-CCeEEEEeCC---CcE--EEEeccCcCC-cCCCCeeEEEEC
Q 016446 215 VR-NAELMEV--SRT-EFMTPSAFIFLYENQLFLT-FR-NRTVAVWNFR---GEL--VTSFEDHLLW-HPDCNTNNIYIT 282 (389)
Q Consensus 215 ~~-tg~~~~~--l~g-h~~~v~sv~fspdg~~laS-~s-D~tIklWd~~---G~~--l~tl~gh~~~-~~~~~v~sv~fS 282 (389)
+. +|++... +.. ....+..++|+|||++|+. .. +++|++|+++ |++ +..+...... .....+..++||
T Consensus 169 ~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 248 (347)
T 3hfq_A 169 VSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLS 248 (347)
T ss_dssp ECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEEC
T ss_pred ECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEEC
Confidence 98 6765432 222 2336888999999996555 45 8999999985 443 3333322210 000126789999
Q ss_pred CCCCEEEEEecCCCcccccCCCCCeEEEEeCC-CC--eEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccc
Q 016446 283 SDQDLIISYCKAEPEDQWMEGSAGSINVSSIL-TG--KCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEA 359 (389)
Q Consensus 283 pdG~~laS~s~D~~~~~~~~s~D~tIklWd~~-tg--~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (389)
|||++|+.++.. +++|++||+. +| +.+..+..|.
T Consensus 249 pdG~~l~v~~~~----------~~~v~v~~~~~~g~~~~~~~~~~~~--------------------------------- 285 (347)
T 3hfq_A 249 HDGHFLYVSNRG----------YNTLAVFAVTADGHLTLIQQISTEG--------------------------------- 285 (347)
T ss_dssp TTSCEEEEEEET----------TTEEEEEEECGGGCEEEEEEEECSS---------------------------------
T ss_pred CCCCEEEEEeCC----------CCEEEEEEECCCCcEEEeEEEecCC---------------------------------
Confidence 999988544432 4899999987 33 5666666654
Q ss_pred cCCEEEEEECCCCCEEEEecCC-CcEEEcc
Q 016446 360 LEDITSLFYDEERNEIYTGNRH-GLVHVWS 388 (389)
Q Consensus 360 ~~~V~svafSpdg~~LaSgs~D-~tIrlW~ 388 (389)
..+.+++|||||++|+.++.+ ++|++|+
T Consensus 286 -~~~~~~~~spdg~~l~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 286 -DFPRDFDLDPTEAFVVVVNQNTDNATLYA 314 (347)
T ss_dssp -SCCCEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred -CCcCeEEECCCCCEEEEEEcCCCcEEEEE
Confidence 367899999999999888765 9999994
No 154
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.95 E-value=4.8e-26 Score=220.58 Aligned_cols=319 Identities=9% Similarity=0.025 Sum_probs=206.8
Q ss_pred EEecccceeeeeeecCCcceEEE-----EEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeeccc
Q 016446 27 AFSRETNRRICFLNVSPDEVIRS-----LFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLK 101 (389)
Q Consensus 27 lW~~~tg~~l~tl~~~~~~~v~s-----v~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~ 101 (389)
.++..+|.++..|..+. ..+.+ .+|||||+.|+.++... .. .++.+|++..|+. ..+.. .+..
T Consensus 14 ~~~~~~g~~~~~lt~~~-~~~~~~~~~~~~~SpDg~~l~~~~~~~-g~------~~l~~~d~~~g~~---~~lt~-~~~~ 81 (388)
T 3pe7_A 14 YQDASTGAQVTRLTPPD-VTCHRNYFYQKCFTRDGSKLLFGGAFD-GP------WNYYLLDLNTQVA---TQLTE-GRGD 81 (388)
T ss_dssp EECTTTCCEEEECSCTT-SCEECCCTTSCCBCTTSCEEEEEECTT-SS------CEEEEEETTTCEE---EECCC-SSCB
T ss_pred EecCCCCcceEEecCCc-ccccchhhcCccCCCCCCEEEEEEcCC-CC------ceEEEEeCCCCce---EEeee-CCCC
Confidence 45677899999998865 45666 88999999999976411 11 3577788887765 22211 1222
Q ss_pred CceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEE--EecCCcEEEEE--Ec-CCceEEEEec----------------
Q 016446 102 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY--SISDKHVQEIK--IS-PGIMLLIFNR---------------- 160 (389)
Q Consensus 102 ~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~--tl~~~~V~~va--fS-~g~~la~~~~---------------- 160 (389)
.+..++|| |||+.|+.++.+++|++||+.++++.. ..+...+.... ++ +|.+++....
T Consensus 82 ~~~~~~~s-pdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~ 160 (388)
T 3pe7_A 82 NTFGGFLS-PDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHE 160 (388)
T ss_dssp CSSSCEEC-TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHH
T ss_pred CccceEEc-CCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhh
Confidence 22357898 999999999999999999999998654 44455564444 47 5777754321
Q ss_pred ---CCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEec-CCCeEEEEeC------CCcEEEEECCCCeEEEEcccCC-C
Q 016446 161 ---SSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQ-FNEKLLVKQE------NENLQILDVRNAELMEVSRTEF-M 229 (389)
Q Consensus 161 ---~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~-~~~~l~~~s~------D~tIklWd~~tg~~~~~l~gh~-~ 229 (389)
.+.+..|.+||+.+|+..... .+...+..++|+ | ++.+|+..+. +..|.++|+.+++......++. .
T Consensus 161 ~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~s-p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~ 238 (388)
T 3pe7_A 161 FYFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYR-PYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGE 238 (388)
T ss_dssp HGGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEE-TTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTE
T ss_pred hhccCCcceEEEEECCCCceEEee-cCCccccccEEC-CCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCc
Confidence 234578999999999765444 455678899998 7 8888887664 3478888887666554444332 3
Q ss_pred ceEEEEEcCCCcEEEEEc--CC----eEEEEeCC-Cc--EEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccc
Q 016446 230 TPSAFIFLYENQLFLTFR--NR----TVAVWNFR-GE--LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQW 300 (389)
Q Consensus 230 ~v~sv~fspdg~~laS~s--D~----tIklWd~~-G~--~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~ 300 (389)
.+..++|||||+.|+..+ ++ +|.+||+. |+ .+..+.++..... ....++|||||++|+....+. ...
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~--~~~~~~~spdg~~l~~~~~~~--~~~ 314 (388)
T 3pe7_A 239 SCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMS--NYDGSLMVGDGSDAPVDVQDD--SGY 314 (388)
T ss_dssp EEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEE--CTTSSEEEEEECCC------------
T ss_pred ccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeee--cCCCCeEccCCCcceeEeeec--ccc
Confidence 688899999999876654 22 39999997 76 3445554221100 012347999999998653210 000
Q ss_pred cCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEec-
Q 016446 301 MEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGN- 379 (389)
Q Consensus 301 ~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs- 379 (389)
+...+..|++||+.+|+. ..|..|...... ...+....+.+++|||||+.|+.++
T Consensus 315 ~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~-----------------------~~~~~~~~~~~~~~spDg~~l~~~s~ 370 (388)
T 3pe7_A 315 KIENDPFLYVFNMKNGTQ-HRVARHDTSWKV-----------------------FEGDRQVTHPHPSFTPDDKQILFTSD 370 (388)
T ss_dssp --CCCCEEEEEETTTTEE-EEEEECCCCCCC-----------------------BTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred ccCCCCEEEEEeccCCce-EEeccccCcccc-----------------------cccccccCCCCccCCCCCCEEEEEec
Confidence 012357999999988775 566666520000 0000001467789999999888766
Q ss_pred CCCcEEEcc
Q 016446 380 RHGLVHVWS 388 (389)
Q Consensus 380 ~D~tIrlW~ 388 (389)
.++..+||.
T Consensus 371 ~~g~~~l~~ 379 (388)
T 3pe7_A 371 VHGKPALYL 379 (388)
T ss_dssp TTSSCEEEE
T ss_pred CCCceeEEE
Confidence 578888884
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.95 E-value=1.4e-27 Score=252.07 Aligned_cols=272 Identities=9% Similarity=0.139 Sum_probs=200.9
Q ss_pred EEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecc--cCceeEEEecCCCeEEEEecC----
Q 016446 48 RSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESL--KWPGFVEFDDVNGKVLTYSAQ---- 121 (389)
Q Consensus 48 ~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~--~~~~~v~Fs~pdG~~Las~s~---- 121 (389)
.+++|+|||+.+++ + .| .++++|++..|+. ..++..... ..+.+++|| |||++||+++.
T Consensus 19 ~~~~~s~dg~~~~~----~-~d------~~i~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~S-pDg~~la~~~~~~~~ 83 (719)
T 1z68_A 19 FFPNWISGQEYLHQ----S-AD------NNIVLYNIETGQS---YTILSNRTMKSVNASNYGLS-PDRQFVYLESDYSKL 83 (719)
T ss_dssp CCCEESSSSEEEEE----C-TT------SCEEEEESSSCCE---EEEECHHHHHTTTCSEEEEC-TTSSEEEEEEEEEEC
T ss_pred CccEECCCCeEEEE----c-CC------CCEEEEEcCCCcE---EEEEccccccccceeeEEEC-CCCCeEEEEecCcee
Confidence 48899999975554 2 46 6889999998875 334431111 125789998 99999999886
Q ss_pred -----CCeEEEEeCCCCeEE--EEecCCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEe-ecCCce----
Q 016446 122 -----DSIYKVFDLKNYTML--YSISDKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFY-HLLHRN---- 188 (389)
Q Consensus 122 -----D~tiklWdl~~g~~l--~tl~~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~-~~~~~~---- 188 (389)
|++|++||+.+|+++ ..+ ...+.+++|| ||++||.+. |++|++||+.+|++.+... ++...+
T Consensus 84 ~~~s~~~~i~~~d~~~g~~~~~~~l-~~~~~~~~~SPDG~~la~~~----~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~ 158 (719)
T 1z68_A 84 WRYSYTATYYIYDLSNGEFVRGNEL-PRPIQYLCWSPVGSKLAYVY----QNNIYLKQRPGDPPFQITFNGRENKIFNGI 158 (719)
T ss_dssp SSSCEEEEEEEEETTTTEECCSSCC-CSSBCCEEECSSTTCEEEEE----TTEEEEESSTTSCCEECCCCCBTTTEEESS
T ss_pred EEeecceEEEEEECCCCccccceec-CcccccceECCCCCEEEEEE----CCeEEEEeCCCCCcEEEecCCCcCCeEccc
Confidence 799999999999873 223 3568999999 688998763 3699999999998875432 322212
Q ss_pred -------------eEEEEEecCCCeEEEEeCCC----------------------------------cEEEEECCCCeEE
Q 016446 189 -------------KKVDFIEQFNEKLLVKQENE----------------------------------NLQILDVRNAELM 221 (389)
Q Consensus 189 -------------~~v~f~~~~~~~l~~~s~D~----------------------------------tIklWd~~tg~~~ 221 (389)
..++|+ ||+.+|+.++.|. +|++||+.+++++
T Consensus 159 ~~~v~~ee~~~~~~~~~wS-PDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~ 237 (719)
T 1z68_A 159 PDWVYEEEMLATKYALWWS-PNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYV 237 (719)
T ss_dssp CCHHHHHHTTCSSCCEEEC-TTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHH
T ss_pred ccceeeeecccCcccEEEC-CCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCcc
Confidence 489998 8899999987552 8999999999863
Q ss_pred ---E-----EcccCCCceEEEEEcCCCcEEEEEc---C--CeEEEEe----CC-CcEEEEe----ccCcCCcCCCCee--
Q 016446 222 ---E-----VSRTEFMTPSAFIFLYENQLFLTFR---N--RTVAVWN----FR-GELVTSF----EDHLLWHPDCNTN-- 277 (389)
Q Consensus 222 ---~-----~l~gh~~~v~sv~fspdg~~laS~s---D--~tIklWd----~~-G~~l~tl----~gh~~~~~~~~v~-- 277 (389)
+ .+.+|...+.+++|||||+++++.. + ..|.+|| +. |++...+ ++|..+ |.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~-----~~~~ 312 (719)
T 1z68_A 238 GPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGW-----AGGF 312 (719)
T ss_dssp CCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSC-----SSSS
T ss_pred ceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCce-----Eccc
Confidence 2 2457999999999999999888853 2 2488899 86 7777666 477776 44
Q ss_pred ---EEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceec
Q 016446 278 ---NIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRS 354 (389)
Q Consensus 278 ---sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (389)
.++|||||+.|+..+.+. +....|.+||+.+++ ...|..+.
T Consensus 313 ~~~~~~~spdg~~l~~~~~~~-------~g~~~l~~~~~~~~~-~~~lt~~~---------------------------- 356 (719)
T 1z68_A 313 FVSTPVFSYDAISYYKIFSDK-------DGYKHIHYIKDTVEN-AIQITSGK---------------------------- 356 (719)
T ss_dssp SCCCCEECTTSSCEEEEEECT-------TSCEEEEEESSCSTT-CEECSCSS----------------------------
T ss_pred cCCccEECCCCCeEEEEEEcc-------CCceEEEEEECCCCc-eEecccCc----------------------------
Confidence 789999999776532221 123578899988777 56666554
Q ss_pred ccccccCCEEEEEECCCCCEEEEecCC-----CcEEEcc
Q 016446 355 TVGEALEDITSLFYDEERNEIYTGNRH-----GLVHVWS 388 (389)
Q Consensus 355 ~~~~~~~~V~svafSpdg~~LaSgs~D-----~tIrlW~ 388 (389)
..|..+.|+ ||+.|+..+.+ ++++||.
T Consensus 357 ------~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~ 388 (719)
T 1z68_A 357 ------WEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYR 388 (719)
T ss_dssp ------SCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEE
T ss_pred ------eEEEEEEEE-eCCEEEEEEecCCCCCceEEEEE
Confidence 368888888 88877766654 8899996
No 156
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.95 E-value=2e-25 Score=211.46 Aligned_cols=266 Identities=7% Similarity=-0.043 Sum_probs=193.7
Q ss_pred ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcc
Q 016446 13 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 92 (389)
Q Consensus 13 ~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~ 92 (389)
+.++++.+.+++|++||..+|+.++++..+....+..++|+|||+.++.+. ..+ ..+.+|++.+|+...
T Consensus 11 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~---~~~------~~i~~~d~~t~~~~~-- 79 (349)
T 1jmx_B 11 HEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN---NHY------GDIYGIDLDTCKNTF-- 79 (349)
T ss_dssp CEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEE---TTT------TEEEEEETTTTEEEE--
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEe---CCC------CcEEEEeCCCCcEEE--
Confidence 778899999999999999999999998865423678999999999766542 355 678899988887511
Q ss_pred eeEeeec-----ccCceeEEEecCCCeEEEEecCC------------CeEEEEeCCCCe---EEEEec-CCcEEEEEEcC
Q 016446 93 ALFESES-----LKWPGFVEFDDVNGKVLTYSAQD------------SIYKVFDLKNYT---MLYSIS-DKHVQEIKISP 151 (389)
Q Consensus 93 ~l~~~~~-----~~~~~~v~Fs~pdG~~Las~s~D------------~tiklWdl~~g~---~l~tl~-~~~V~~vafS~ 151 (389)
.+.... ...+..++|+ |||++|+.++.+ ++|++||+++++ .+..+. ...+.+++|+|
T Consensus 80 -~~~~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~ 157 (349)
T 1jmx_B 80 -HANLSSVPGEVGRSMYSFAIS-PDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD 157 (349)
T ss_dssp -EEESCCSTTEEEECSSCEEEC-TTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECT
T ss_pred -EEEcccccccccccccceEEC-CCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECC
Confidence 111111 1236789998 999999988865 999999998854 334443 34688999995
Q ss_pred -CceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCC------------------------ceeEEEEEecCCC-------
Q 016446 152 -GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLH------------------------RNKKVDFIEQFNE------- 199 (389)
Q Consensus 152 -g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~------------------------~~~~v~f~~~~~~------- 199 (389)
|. ++++ + ..|++||+.+|+++.+++.+.. ....+++. +++.
T Consensus 158 dg~-l~~~--~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~ 230 (349)
T 1jmx_B 158 DGS-LYVA--G---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARF-KDDKQDPATAD 230 (349)
T ss_dssp TSC-EEEE--S---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC--------CCCE
T ss_pred CCc-EEEc--c---CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeec-CCCcCCccccc
Confidence 66 5554 2 3499999999999998874320 11234443 1110
Q ss_pred ----eEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcC-CCcEEEEEcCCeEEEEeCC-CcEEEEeccCcCCcCC
Q 016446 200 ----KLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPD 273 (389)
Q Consensus 200 ----~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fsp-dg~~laS~sD~tIklWd~~-G~~l~tl~gh~~~~~~ 273 (389)
++.....++++++|++ ..+...+..++|+| ||++|+.+ +++|.+||+. +++++++..+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~~---- 296 (349)
T 1jmx_B 231 LLYGYLSVDLKTGKTHTQEF---------ADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDHT---- 296 (349)
T ss_dssp EEEEEEEEETTTCCEEEEEE---------EECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEECSSC----
T ss_pred cceeEEEEeccCCcEEeccc---------ccCCCcceeeEecCCCCCEEEEE-cCeEEEEECccCeEEEEEcCCCC----
Confidence 1111224455555544 33566889999999 99999988 9999999997 898888874432
Q ss_pred CCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCC
Q 016446 274 CNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 325 (389)
Q Consensus 274 ~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH 325 (389)
+..++|||||++|++++. +++|++||+.+++.+..++.+
T Consensus 297 --~~~~~~s~dg~~l~~~~~-----------~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 297 --YYCVAFDKKGDKLYLGGT-----------FNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp --CCEEEECSSSSCEEEESB-----------SSEEEEEETTTTEEEEEEECS
T ss_pred --ccceEECCCCCEEEEecC-----------CCeEEEEeccccceeeeeecC
Confidence 479999999999998654 489999999999999998755
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.95 E-value=6.3e-26 Score=214.88 Aligned_cols=230 Identities=7% Similarity=0.017 Sum_probs=180.1
Q ss_pred eEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec-CC--cEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEE
Q 016446 105 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DK--HVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKV 180 (389)
Q Consensus 105 ~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~-~~--~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~t 180 (389)
.++|+ ++++++++++.|++|++||+.+++++.++. .. .+..++|+ +|++++++. ..+++|.+||+.+|+.+.+
T Consensus 4 g~~~~-~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~--~~~~~i~~~d~~t~~~~~~ 80 (349)
T 1jmx_B 4 GPALK-AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN--NHYGDIYGIDLDTCKNTFH 80 (349)
T ss_dssp CCCCC-TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEE--TTTTEEEEEETTTTEEEEE
T ss_pred ccccc-CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEe--CCCCcEEEEeCCCCcEEEE
Confidence 36786 899999999999999999999999888776 33 68899999 576666654 3457999999999999988
Q ss_pred EeecC------CceeEEEEEecCCCeEEEEeCC------------CcEEEEECCCCeE---EEEcccCCCceEEEEEcCC
Q 016446 181 FYHLL------HRNKKVDFIEQFNEKLLVKQEN------------ENLQILDVRNAEL---MEVSRTEFMTPSAFIFLYE 239 (389)
Q Consensus 181 l~~~~------~~~~~v~f~~~~~~~l~~~s~D------------~tIklWd~~tg~~---~~~l~gh~~~v~sv~fspd 239 (389)
+..+. ..+..++|+ |++.++++++.+ ++|.+||+++++. +..+..+ ..+.+++|+||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~d 158 (349)
T 1jmx_B 81 ANLSSVPGEVGRSMYSFAIS-PDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP-RQVYLMRAADD 158 (349)
T ss_dssp EESCCSTTEEEECSSCEEEC-TTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC-SSCCCEEECTT
T ss_pred EEcccccccccccccceEEC-CCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC-CcccceeECCC
Confidence 87322 226889998 788888888755 9999999999654 3444433 46889999999
Q ss_pred CcEEEEEcCCeEEEEeCC-CcEEEEeccCcCCcC----------------------------------------------
Q 016446 240 NQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHP---------------------------------------------- 272 (389)
Q Consensus 240 g~~laS~sD~tIklWd~~-G~~l~tl~gh~~~~~---------------------------------------------- 272 (389)
|++++ ++ +.|++||+. |+++.++..+....+
T Consensus 159 g~l~~-~~-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 236 (349)
T 1jmx_B 159 GSLYV-AG-PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 236 (349)
T ss_dssp SCEEE-ES-SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEE
T ss_pred CcEEE-cc-CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEE
Confidence 99554 43 339999996 998888764420000
Q ss_pred -----------------CCCeeEEEECC-CCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccc
Q 016446 273 -----------------DCNTNNIYITS-DQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDE 334 (389)
Q Consensus 273 -----------------~~~v~sv~fSp-dG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~ 334 (389)
...+.+++||| ||++|+.+ + +.|++||+.+++.+.++..+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~-----------~~v~~~d~~~~~~~~~~~~~~-------- 295 (349)
T 1jmx_B 237 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--L-----------NRLAKYDLKQRKLIKAANLDH-------- 295 (349)
T ss_dssp EEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--E-----------SEEEEEETTTTEEEEEEECSS--------
T ss_pred EEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--c-----------CeEEEEECccCeEEEEEcCCC--------
Confidence 00245778889 99999987 3 799999999999998887443
Q ss_pred cCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 335 LGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
.+++++|||||+.|++++.|++|++||.
T Consensus 296 ---------------------------~~~~~~~s~dg~~l~~~~~~~~v~v~d~ 323 (349)
T 1jmx_B 296 ---------------------------TYYCVAFDKKGDKLYLGGTFNDLAVFNP 323 (349)
T ss_dssp ---------------------------CCCEEEECSSSSCEEEESBSSEEEEEET
T ss_pred ---------------------------CccceEECCCCCEEEEecCCCeEEEEec
Confidence 5678999999999999999999999983
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.94 E-value=2.7e-24 Score=207.80 Aligned_cols=258 Identities=10% Similarity=0.161 Sum_probs=178.6
Q ss_pred eeeeEeEe--ccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCC----CeEEEEeCCC--CeE--EEEec--CCc
Q 016446 76 RSTKIEYI--RRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD----SIYKVFDLKN--YTM--LYSIS--DKH 143 (389)
Q Consensus 76 ~~~~l~~i--~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D----~tiklWdl~~--g~~--l~tl~--~~~ 143 (389)
..+.+|.+ .+|++ ..+... ....|..++|+ |||++|++++.+ ++|++|++.. |++ +.... +..
T Consensus 27 ~~i~~~~~d~~~g~~---~~~~~~-~~~~p~~l~~s-pdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~ 101 (361)
T 3scy_A 27 KGIYTFRFNEETGES---LPLSDA-EVANPSYLIPS-ADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGAD 101 (361)
T ss_dssp CEEEEEEEETTTCCE---EEEEEE-ECSCCCSEEEC-TTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSC
T ss_pred CCEEEEEEeCCCCCE---EEeecc-cCCCCceEEEC-CCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCC
Confidence 56777766 55665 112212 45567789998 999999998886 8999999864 653 34443 456
Q ss_pred EEEEEEcCCceEEEEecCCCCeeEEEEEcCCCeEEEEEe---ec-----------CCceeEEEEEecCCCeEEEEe-CCC
Q 016446 144 VQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFY---HL-----------LHRNKKVDFIEQFNEKLLVKQ-ENE 208 (389)
Q Consensus 144 V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~---~~-----------~~~~~~v~f~~~~~~~l~~~s-~D~ 208 (389)
...+++ +|++|++++. .+++|.+|++.++..+..+. .+ ..+...++|+ |++.++++++ .++
T Consensus 102 p~~~~~-dg~~l~~~~~--~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~ 177 (361)
T 3scy_A 102 PCYLTT-NGKNIVTANY--SGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRIT-PDGKYLLADDLGTD 177 (361)
T ss_dssp EEEEEE-CSSEEEEEET--TTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEEC-TTSSEEEEEETTTT
T ss_pred cEEEEE-CCCEEEEEEC--CCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEEC-CCCCEEEEEeCCCC
Confidence 788888 9988887753 45899999997654433221 11 2234679998 7788777765 689
Q ss_pred cEEEEECCCCe-------E------EEEcccCCCceEEEEEcCCCcEEEEE-c-CCeEEEEeCC-CcE--EEEeccCcCC
Q 016446 209 NLQILDVRNAE-------L------MEVSRTEFMTPSAFIFLYENQLFLTF-R-NRTVAVWNFR-GEL--VTSFEDHLLW 270 (389)
Q Consensus 209 tIklWd~~tg~-------~------~~~l~gh~~~v~sv~fspdg~~laS~-s-D~tIklWd~~-G~~--l~tl~gh~~~ 270 (389)
+|++|++.... + ......+...+..++|+|||++|+.+ . +++|++||++ |++ +.++......
T Consensus 178 ~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~ 257 (361)
T 3scy_A 178 QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVN 257 (361)
T ss_dssp EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSC
T ss_pred EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCC
Confidence 99999887533 2 12223445678899999999977655 4 8999999996 754 3333322210
Q ss_pred cCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCC--CCe--EEEEecCCCCCCCcccccCCCCCCCcccc
Q 016446 271 HPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL--TGK--CLAKINATNCSPKVDDELGSSSTGKSKKL 346 (389)
Q Consensus 271 ~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~--tg~--~l~tl~gH~~~~~~~~~~~~~~~~~~~~~ 346 (389)
. .....++|||||++|+.+..+ .+++|++|++. +|+ .+..+.. .
T Consensus 258 ~--~~~~~i~~spdg~~l~v~~~~---------~~~~i~v~~~~~~~g~~~~~~~~~~-g-------------------- 305 (361)
T 3scy_A 258 A--QGSGDIHLSPDGKYLYASNRL---------KADGVAIFKVDETNGTLTKVGYQLT-G-------------------- 305 (361)
T ss_dssp C--CCEEEEEECTTSSEEEEEECS---------SSCEEEEEEECTTTCCEEEEEEEEC-S--------------------
T ss_pred C--CCcccEEECCCCCEEEEECCC---------CCCEEEEEEEcCCCCcEEEeeEecC-C--------------------
Confidence 0 115799999999999766542 13799999985 566 4444443 2
Q ss_pred ccccceecccccccCCEEEEEECCCCCEEEEec-CCCcEEEcc
Q 016446 347 NKSSYIRSTVGEALEDITSLFYDEERNEIYTGN-RHGLVHVWS 388 (389)
Q Consensus 347 ~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs-~D~tIrlW~ 388 (389)
..+.+++|||||++|+.++ .+++|++|+
T Consensus 306 --------------~~~~~~~~spdg~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 306 --------------IHPRNFIITPNGKYLLVACRDTNVIQIFE 334 (361)
T ss_dssp --------------SCCCEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred --------------CCCceEEECCCCCEEEEEECCCCCEEEEE
Confidence 3677899999999988887 679999974
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.94 E-value=2e-23 Score=201.64 Aligned_cols=276 Identities=14% Similarity=0.135 Sum_probs=185.6
Q ss_pred EEEEEe----cCceEEEEec--ccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEecc--C
Q 016446 15 IVFALA----HSGVCAAFSR--ETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRR--G 86 (389)
Q Consensus 15 ~~a~~~----~~gtiklW~~--~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~--g 86 (389)
++.+++ .++.|.+|.+ ++|+....... +......++|+|||+.|++++.++..+ ..+.+|++.. |
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~------~~v~~~~~~~~~g 87 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQ------AAVSAFAFDKEKG 87 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTT------CEEEEEEEETTTT
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCC------CcEEEEEEeCCCC
Confidence 445554 4678999976 45654433222 346778899999999999977543334 5778888754 5
Q ss_pred CCCCcceeEeee-cccCceeEEEecCCCeEEEEec-CCCeEEEEeCCCCeEEE----Ee--c----------CCcEEEEE
Q 016446 87 KPDSGFALFESE-SLKWPGFVEFDDVNGKVLTYSA-QDSIYKVFDLKNYTMLY----SI--S----------DKHVQEIK 148 (389)
Q Consensus 87 ~~~~~~~l~~~~-~~~~~~~v~Fs~pdG~~Las~s-~D~tiklWdl~~g~~l~----tl--~----------~~~V~~va 148 (389)
++ ..+.... ....+..++| ||++|+.++ .+++|++|++.+...+. .+ . ...+.+++
T Consensus 88 ~~---~~~~~~~~~~~~p~~~~~---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 161 (361)
T 3scy_A 88 TL---HLLNTQKTMGADPCYLTT---NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVR 161 (361)
T ss_dssp EE---EEEEEEECSSSCEEEEEE---CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEE
T ss_pred cE---EEeeEeccCCCCcEEEEE---CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEE
Confidence 43 2222211 2334556776 577666555 68999999997433221 11 1 12468899
Q ss_pred Ec-CCceEEEEecCCCCeeEEEEEcCCCe-------EE-----EEEe-ecCCceeEEEEEecCCCeEEEEe-CCCcEEEE
Q 016446 149 IS-PGIMLLIFNRSSSHVPLKILSIEDGT-------VL-----KVFY-HLLHRNKKVDFIEQFNEKLLVKQ-ENENLQIL 213 (389)
Q Consensus 149 fS-~g~~la~~~~~s~d~tiklWd~~tG~-------~l-----~tl~-~~~~~~~~v~f~~~~~~~l~~~s-~D~tIklW 213 (389)
|| +|++|+++. ..+.+|++|++.... +. ..+. .+......++|+ |++..+++++ .+++|++|
T Consensus 162 ~spdg~~l~~~~--~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s-pdg~~l~v~~~~~~~v~v~ 238 (361)
T 3scy_A 162 ITPDGKYLLADD--LGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFN-SDGKFAYLINEIGGTVIAF 238 (361)
T ss_dssp ECTTSSEEEEEE--TTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEEC-TTSSEEEEEETTTCEEEEE
T ss_pred ECCCCCEEEEEe--CCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEc-CCCCEEEEEcCCCCeEEEE
Confidence 99 577777664 345799999887543 21 1222 233456789998 7788787776 79999999
Q ss_pred ECCCCeE--EEE---cccCCCceEEEEEcCCCcEEEEEc-C--CeEEEEeCC---Cc--EEEEeccCcCCcCCCCeeEEE
Q 016446 214 DVRNAEL--MEV---SRTEFMTPSAFIFLYENQLFLTFR-N--RTVAVWNFR---GE--LVTSFEDHLLWHPDCNTNNIY 280 (389)
Q Consensus 214 d~~tg~~--~~~---l~gh~~~v~sv~fspdg~~laS~s-D--~tIklWd~~---G~--~l~tl~gh~~~~~~~~v~sv~ 280 (389)
|+.+|++ ++. +..+...+..++|+|||++|+.+. + ++|++|+++ |+ .+..+.. ... +..++
T Consensus 239 ~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~-----~~~~~ 312 (361)
T 3scy_A 239 RYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIH-----PRNFI 312 (361)
T ss_dssp EEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSC-----CCEEE
T ss_pred EecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCC-----CceEE
Confidence 9998876 222 344556788999999999886654 5 799999984 55 4455543 222 57999
Q ss_pred ECCCCCEEEEEecCCCcccccCCCCCeEEEE--eCCCCeEEEEe
Q 016446 281 ITSDQDLIISYCKAEPEDQWMEGSAGSINVS--SILTGKCLAKI 322 (389)
Q Consensus 281 fSpdG~~laS~s~D~~~~~~~~s~D~tIklW--d~~tg~~l~tl 322 (389)
|||||++|++++.+ +++|++| |..+|++....
T Consensus 313 ~spdg~~l~~~~~~----------~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 313 ITPNGKYLLVACRD----------TNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp ECTTSCEEEEEETT----------TTEEEEEEECTTTCCEEECS
T ss_pred ECCCCCEEEEEECC----------CCCEEEEEEECCCCcEeecc
Confidence 99999999998754 5899995 66688876543
No 160
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.93 E-value=8e-25 Score=211.30 Aligned_cols=316 Identities=9% Similarity=0.017 Sum_probs=203.6
Q ss_pred EEecccceeeeeeecCCcc----eEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccC
Q 016446 27 AFSRETNRRICFLNVSPDE----VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKW 102 (389)
Q Consensus 27 lW~~~tg~~l~tl~~~~~~----~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~ 102 (389)
..+..+|+.+..|..+... .+.+++|||||+.|+.++... .+ ..+.++++..|+. ..+.. .....
T Consensus 14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~-g~------~~l~~~d~~~~~~---~~l~~-~~~~~ 82 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFD-GN------RNYYLLNLETQQA---VQLTE-GKGDN 82 (396)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTT-SS------CEEEEEETTTTEE---EECCC-SSCBC
T ss_pred eecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecC-CC------ceEEEEECCCCcE---EEeec-CCCCc
Confidence 4477889999888765321 267889999999998865432 22 3567788777764 22211 11111
Q ss_pred ceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEe--cCCcEEE-------------------EEEc-CCceEEEEe-
Q 016446 103 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI--SDKHVQE-------------------IKIS-PGIMLLIFN- 159 (389)
Q Consensus 103 ~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl--~~~~V~~-------------------vafS-~g~~la~~~- 159 (389)
...++|| |||+.||..+.+++|++||+.++++.... +..+... ++++ +|..++...
T Consensus 83 ~~~~~~s-pdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 161 (396)
T 3c5m_A 83 TFGGFIS-TDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEF 161 (396)
T ss_dssp TTTCEEC-TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred cccceEC-CCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeee
Confidence 1237898 99999999999999999999988865433 3344433 3445 344443321
Q ss_pred -cCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEec-CCCeEEEEeCC------CcEEEEECCCCeEEEEcccC-CCc
Q 016446 160 -RSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQ-FNEKLLVKQEN------ENLQILDVRNAELMEVSRTE-FMT 230 (389)
Q Consensus 160 -~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~-~~~~l~~~s~D------~tIklWd~~tg~~~~~l~gh-~~~ 230 (389)
....+..|.+||+.+|++..... +...+..+.|+ | ++.+|+..+.+ ..|.+||+.+++.......+ ...
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~~~~-~~~~~~~~~~s-p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 239 (396)
T 3c5m_A 162 YHTNPTCRLIKVDIETGELEVIHQ-DTAWLGHPIYR-PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGES 239 (396)
T ss_dssp HHTCCCEEEEEEETTTCCEEEEEE-ESSCEEEEEEE-TTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEE
T ss_pred ccCCCcceEEEEECCCCcEEeecc-CCcccccceEC-CCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCcc
Confidence 11455789999999998776654 55778899998 5 67777776533 46899999877765554422 336
Q ss_pred eEEEEEcCCCcEEEEEc-C-----CeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECC-CCCEEEEEecCCC---c--
Q 016446 231 PSAFIFLYENQLFLTFR-N-----RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITS-DQDLIISYCKAEP---E-- 297 (389)
Q Consensus 231 v~sv~fspdg~~laS~s-D-----~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSp-dG~~laS~s~D~~---~-- 297 (389)
+..++|+|||++|+..+ + ++|.+||+. |++.. +..... .. ++||| ||++|+.++.+.| .
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~------~~-~~~s~~dg~~l~~~~~~~p~~~~~~ 311 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEE-VMVMPP------CS-HLMSNFDGSLMVGDGCDAPVDVADA 311 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEE-EEECCS------EE-EEEECSSSSEEEEEECCC-------
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEE-eeeCCC------CC-CCccCCCCceEEEecCCcceeeccc
Confidence 88899999999887775 3 459999997 76543 222111 23 89999 9999998653210 0
Q ss_pred ccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEE
Q 016446 298 DQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYT 377 (389)
Q Consensus 298 ~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaS 377 (389)
.......+..|++||+.+|+. ..|..|...... . ..+....+.+++|||||+.|+.
T Consensus 312 ~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~--~---------------------~~~~~~~~~~~~~s~dg~~l~~ 367 (396)
T 3c5m_A 312 DSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDV--L---------------------DGDRQITHPHPSFTPNDDGVLF 367 (396)
T ss_dssp ---CCCCCCEEEEEETTTTBC-CEEEECCCCCCC--B---------------------TTBSSTTCCCCEECTTSSEEEE
T ss_pred cccccCCCCcEEEEecccCce-EEccCCCCcccc--c---------------------cccccCCCCCceEccCCCeEEE
Confidence 000011357899999998875 456655410000 0 0000012556799999999887
Q ss_pred ecC-CCcEEEcc
Q 016446 378 GNR-HGLVHVWS 388 (389)
Q Consensus 378 gs~-D~tIrlW~ 388 (389)
++. ++...||.
T Consensus 368 ~s~~~~~~~l~~ 379 (396)
T 3c5m_A 368 TSDFEGVPAIYI 379 (396)
T ss_dssp EECTTSSCEEEE
T ss_pred EecCCCCceEEE
Confidence 774 67777774
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.93 E-value=1.3e-23 Score=224.69 Aligned_cols=322 Identities=11% Similarity=0.040 Sum_probs=211.6
Q ss_pred ccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcc----eEEEEEEeeCCCEEEEEEEeecCCCcceeeee
Q 016446 4 TKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDE----VIRSLFYNKNNDSLITVSVYASDNFSSLKCRS 77 (389)
Q Consensus 4 ~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~----~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~ 77 (389)
.+...+.++ +++|++. ||+|++||..+|++...+.++... ...+++|||||++|++++.+...- ..=....
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~-r~~~~~~ 93 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQW-RHSYTAS 93 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECS-SSCEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeE-EEccceE
Confidence 345678888 7888886 999999999999998888876522 224588999999999976543221 0011145
Q ss_pred eeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEE-EecC--CcE----------
Q 016446 78 TKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY-SISD--KHV---------- 144 (389)
Q Consensus 78 ~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~-tl~~--~~V---------- 144 (389)
+.+||+.+|++. .+. .+.+.+..++|| |||+.||.++ |++|++||+.+|++.+ +..+ ..+
T Consensus 94 ~~~~d~~~~~~~---~l~--~~~~~~~~~~~S-PdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ 166 (740)
T 4a5s_A 94 YDIYDLNKRQLI---TEE--RIPNNTQWVTWS-PVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYE 166 (740)
T ss_dssp EEEEETTTTEEC---CSS--CCCTTEEEEEEC-SSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHH
T ss_pred EEEEECCCCcEE---Ecc--cCCCcceeeEEC-CCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCccccccc
Confidence 679999988752 222 223456789998 9999999985 7899999999888653 2222 223
Q ss_pred -------EEEEEc-CCceEEEEecCCC---------------------------------CeeEEEEEcCC---Ce--EE
Q 016446 145 -------QEIKIS-PGIMLLIFNRSSS---------------------------------HVPLKILSIED---GT--VL 178 (389)
Q Consensus 145 -------~~vafS-~g~~la~~~~~s~---------------------------------d~tiklWd~~t---G~--~l 178 (389)
.+++|| ||++||..+.+.. ..+|++||+.+ |+ ..
T Consensus 167 ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~ 246 (740)
T 4a5s_A 167 EEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATS 246 (740)
T ss_dssp HHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCE
T ss_pred chhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceE
Confidence 248999 6888988753321 23789999999 84 23
Q ss_pred EEEee------cCCceeEEEEEecCCCeEEEEe----CCCcEEEEECCCCe----EEEEc----ccCCCceE-----EEE
Q 016446 179 KVFYH------LLHRNKKVDFIEQFNEKLLVKQ----ENENLQILDVRNAE----LMEVS----RTEFMTPS-----AFI 235 (389)
Q Consensus 179 ~tl~~------~~~~~~~v~f~~~~~~~l~~~s----~D~tIklWd~~tg~----~~~~l----~gh~~~v~-----sv~ 235 (389)
..+.. |...+.+++|+ |++..++... .+.+|++||+.+|+ |.+.. ++|..+|. .++
T Consensus 247 ~~l~~~~~~~~~~~~~~~~~ws-pdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~ 325 (740)
T 4a5s_A 247 IQITAPASMLIGDHYLCDVTWA-TQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPH 325 (740)
T ss_dssp EEECCCHHHHTSCEEEEEEEEE-ETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCE
T ss_pred EEecCCccCCCCCeEEEEEEEe-CCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCce
Confidence 34432 66778999999 6776555542 44589999999998 54433 56877776 789
Q ss_pred EcCCCcEEE-EEc--C--CeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEe-c--CCCcccccCCCCCe
Q 016446 236 FLYENQLFL-TFR--N--RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYC-K--AEPEDQWMEGSAGS 307 (389)
Q Consensus 236 fspdg~~la-S~s--D--~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s-~--D~~~~~~~~s~D~t 307 (389)
|||||+.|+ ..+ + ..|.+||++|...+.|... .+. |..+. ++||+.|+-.+ . +. .....
T Consensus 326 fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g-~~~----v~~~~-~~d~~~i~f~~~~~~~~-------~~~~~ 392 (740)
T 4a5s_A 326 FTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKG-TWE----VIGIE-ALTSDYLYYISNEYKGM-------PGGRN 392 (740)
T ss_dssp ECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCS-SSC----EEEEE-EECSSEEEEEESCGGGC-------TTCBE
T ss_pred EcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccC-CEE----EEEEE-EEeCCEEEEEEecCCCC-------CceeE
Confidence 999999877 554 4 4788899985544556543 331 55544 25566655433 2 21 11234
Q ss_pred EEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEec
Q 016446 308 INVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGN 379 (389)
Q Consensus 308 IklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs 379 (389)
|...++..++....|...-. +....+..+.|||||+.++-..
T Consensus 393 ly~v~~~g~~~~~~lt~~~~------------------------------~~~~~~~~~~~S~dg~~~~~~~ 434 (740)
T 4a5s_A 393 LYKIQLIDYTKVTCLSCELN------------------------------PERCQYYSVSFSKEAKYYQLRC 434 (740)
T ss_dssp EEEEETTEEEEEEESSTTTS------------------------------TTTBCBEEEEECTTSSEEEEEE
T ss_pred EEEEECCCCCcceeeccccC------------------------------CCCCceEEEEECCCCCEEEEEe
Confidence 55555554433323432100 0003688999999999776443
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.93 E-value=3.4e-23 Score=202.35 Aligned_cols=269 Identities=8% Similarity=0.012 Sum_probs=186.4
Q ss_pred EEEEEecC--ceEEEEec--ccceee--eeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEec-cCC
Q 016446 15 IVFALAHS--GVCAAFSR--ETNRRI--CFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIR-RGK 87 (389)
Q Consensus 15 ~~a~~~~~--gtiklW~~--~tg~~l--~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~-~g~ 87 (389)
.++++++. +.|.+|++ ++|++- ..........+..++|+|||++|++++ .+ .+.+|++. +|+
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~----~~-------~v~~~~~~~~g~ 72 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAA----MK-------KWSSFAVKSPTE 72 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEE----BT-------EEEEEEEEETTE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEc----cc-------eEEEEEECCCCC
Confidence 45566654 56877764 567642 222211224678899999999998754 32 57788886 776
Q ss_pred CCCcceeEeeecccCceeEEEecCCCe--EEEEec-------------CCCeEEEEeCC-CCeEEEEec------CCcEE
Q 016446 88 PDSGFALFESESLKWPGFVEFDDVNGK--VLTYSA-------------QDSIYKVFDLK-NYTMLYSIS------DKHVQ 145 (389)
Q Consensus 88 ~~~~~~l~~~~~~~~~~~v~Fs~pdG~--~Las~s-------------~D~tiklWdl~-~g~~l~tl~------~~~V~ 145 (389)
+ ..+..+...+.+..++|+ |||+ +|++++ .++++++|++. +|++...+. ...+.
T Consensus 73 ~---~~~~~~~~~g~~~~~~~s-pdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~ 148 (365)
T 1jof_A 73 I---VHEASHPIGGHPRANDAD-TNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIH 148 (365)
T ss_dssp E---EEEEEEECCSSGGGGCTT-SCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEE
T ss_pred E---EEeeEeecCCCCccEEEC-CCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcce
Confidence 5 122332222446679998 8999 455664 69999999997 577654332 35799
Q ss_pred EEEEc-CCceEEEEecCCCCeeEEEEEcC-CCeEE--EEEee--cCCceeEEEEEecCCCeEEEEe-CCCcEEEEECC--
Q 016446 146 EIKIS-PGIMLLIFNRSSSHVPLKILSIE-DGTVL--KVFYH--LLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVR-- 216 (389)
Q Consensus 146 ~vafS-~g~~la~~~~~s~d~tiklWd~~-tG~~l--~tl~~--~~~~~~~v~f~~~~~~~l~~~s-~D~tIklWd~~-- 216 (389)
+++|| +|++|+++.. .+.+|++||+. +|++. ..+.. |......++|+ |++..+++++ .+++|++|++.
T Consensus 149 ~~~~spdG~~l~~~~~--~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~s-pdg~~l~v~~~~~~~v~v~~~~~~ 225 (365)
T 1jof_A 149 GMVFDPTETYLYSADL--TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMH-PTGNYLYALMEAGNRICEYVIDPA 225 (365)
T ss_dssp EEEECTTSSEEEEEET--TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEEECTT
T ss_pred EEEECCCCCEEEEEcC--CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEEC-CCCCEEEEEECCCCeEEEEEEeCC
Confidence 99999 5778877643 34699999998 88864 33431 34567899998 7888888776 57999999765
Q ss_pred CCeEE------EEcc----cCCC------ceEEEE-EcCCCcEEEEEc--CC-----eEEEEeCC--CcEEEE---eccC
Q 016446 217 NAELM------EVSR----TEFM------TPSAFI-FLYENQLFLTFR--NR-----TVAVWNFR--GELVTS---FEDH 267 (389)
Q Consensus 217 tg~~~------~~l~----gh~~------~v~sv~-fspdg~~laS~s--D~-----tIklWd~~--G~~l~t---l~gh 267 (389)
+|++. .++. +|.. .+..++ |+|||++|+++. +. +|++|+++ |++... +..+
T Consensus 226 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~ 305 (365)
T 1jof_A 226 THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP 305 (365)
T ss_dssp TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS
T ss_pred CCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecC
Confidence 67653 2232 2333 589999 999999887664 33 89999983 776542 3333
Q ss_pred cCCcCCCCeeEEEECC---CCCEEEEEecCCCcccccCCCCCeEEEEeCCCC
Q 016446 268 LLWHPDCNTNNIYITS---DQDLIISYCKAEPEDQWMEGSAGSINVSSILTG 316 (389)
Q Consensus 268 ~~~~~~~~v~sv~fSp---dG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg 316 (389)
... ...++||| ||++|++++.+ +++|+||++..+
T Consensus 306 ~~~-----~~~~a~sp~~~dg~~l~v~~~~----------~~~v~v~~~~~~ 342 (365)
T 1jof_A 306 TSG-----GHSNAVSPCPWSDEWMAITDDQ----------EGWLEIYRWKDE 342 (365)
T ss_dssp SCC-----TTCCCEEECTTCTTEEEEECSS----------SCEEEEEEEETT
T ss_pred CCC-----cccceecCCCcCCCEEEEEEcC----------CCeEEEEEEchh
Confidence 322 46899999 89999998764 489999998765
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.93 E-value=5.5e-24 Score=207.96 Aligned_cols=245 Identities=12% Similarity=0.046 Sum_probs=172.2
Q ss_pred CceeEEEecCCCeEEEEecCCCeEEEEeCC-CCeEEEEec---CCcEEEEEEcC-Cce--EEEEe------cCC----CC
Q 016446 102 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLK-NYTMLYSIS---DKHVQEIKISP-GIM--LLIFN------RSS----SH 164 (389)
Q Consensus 102 ~~~~v~Fs~pdG~~Las~s~D~tiklWdl~-~g~~l~tl~---~~~V~~vafS~-g~~--la~~~------~~s----~d 164 (389)
.|..++|+ |||++|++++.+ +|++|++. +|++..... ...+..++|+| |++ ++++. ... .+
T Consensus 41 ~~~~~a~s-pdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 41 PISWMTFD-HERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCSEEEEC-TTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCcEEEEC-CCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 56789998 999999988888 99999997 888754332 13356689995 664 33331 011 46
Q ss_pred eeEEEEEcC-CCeEEEEEee----cCCceeEEEEEecCCCeEEEEe-CCCcEEEEECC-CCeEE--EEcc--cCCCceEE
Q 016446 165 VPLKILSIE-DGTVLKVFYH----LLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVR-NAELM--EVSR--TEFMTPSA 233 (389)
Q Consensus 165 ~tiklWd~~-tG~~l~tl~~----~~~~~~~v~f~~~~~~~l~~~s-~D~tIklWd~~-tg~~~--~~l~--gh~~~v~s 233 (389)
+++++|++. +|++..++.. +..+...++|+ |++.+++++. .+++|++||+. +|++. ..+. .|...++.
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~s-pdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~ 197 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFD-PTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW 197 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEEC-CCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCE
Confidence 899999997 5887766652 45678999998 7888887765 57899999998 88764 2333 34667999
Q ss_pred EEEcCCCcEEEEEc--CCeEEEEeCC---CcEE---EEec-------cCcCCc-CCCCeeEEE-ECCCCCEEEEEecCCC
Q 016446 234 FIFLYENQLFLTFR--NRTVAVWNFR---GELV---TSFE-------DHLLWH-PDCNTNNIY-ITSDQDLIISYCKAEP 296 (389)
Q Consensus 234 v~fspdg~~laS~s--D~tIklWd~~---G~~l---~tl~-------gh~~~~-~~~~v~sv~-fSpdG~~laS~s~D~~ 296 (389)
++|+|||++|+.++ +++|++|+++ |++. +++. +|..+. ....+..++ |||||++|++++.+..
T Consensus 198 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~ 277 (365)
T 1jof_A 198 VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANK 277 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESS
T ss_pred eEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCC
Confidence 99999999887764 7899999763 6653 2222 222100 000168999 9999999987765310
Q ss_pred cccccCCCCCeEEEEeCC-CCeEEEE---ecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECC--
Q 016446 297 EDQWMEGSAGSINVSSIL-TGKCLAK---INATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDE-- 370 (389)
Q Consensus 297 ~~~~~~s~D~tIklWd~~-tg~~l~t---l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSp-- 370 (389)
....++|++|++. +|++... +..+. ..+.+++|||
T Consensus 278 -----~~~~~~i~v~~~~~~g~~~~~~~~~~~~~----------------------------------~~~~~~a~sp~~ 318 (365)
T 1jof_A 278 -----FELQGYIAGFKLRDCGSIEKQLFLSPTPT----------------------------------SGGHSNAVSPCP 318 (365)
T ss_dssp -----TTSCCEEEEEEECTTSCEEEEEEEEECSS----------------------------------CCTTCCCEEECT
T ss_pred -----CCCCCeEEEEEECCCCCEEEeeeeeecCC----------------------------------CCcccceecCCC
Confidence 0001399999996 7876542 33333 2455689999
Q ss_pred -CCCEEEEecCC-CcEEEcc
Q 016446 371 -ERNEIYTGNRH-GLVHVWS 388 (389)
Q Consensus 371 -dg~~LaSgs~D-~tIrlW~ 388 (389)
||++|++++.+ ++|++|+
T Consensus 319 ~dg~~l~v~~~~~~~v~v~~ 338 (365)
T 1jof_A 319 WSDEWMAITDDQEGWLEIYR 338 (365)
T ss_dssp TCTTEEEEECSSSCEEEEEE
T ss_pred cCCCEEEEEEcCCCeEEEEE
Confidence 89999999875 9999996
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.92 E-value=6.2e-25 Score=234.87 Aligned_cols=255 Identities=10% Similarity=0.061 Sum_probs=178.2
Q ss_pred eeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEecCC-------cEEEEE
Q 016446 76 RSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-------HVQEIK 148 (389)
Q Consensus 76 ~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~~~-------~V~~va 148 (389)
+.+.|.++..|.+. .+..+++|+ |||++|+++ |++|++||+.+|++...+..+ ...+++
T Consensus 3 ~~~tl~~~~~~~~~-----------~~~~~~~w~-~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (740)
T 4a5s_A 3 KTYTLTDYLKNTYR-----------LKLYSLRWI-SDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYS 68 (740)
T ss_dssp EECCHHHHHHTCSC-----------CCCCCEEEC-SSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEE
T ss_pred CceeHHHHhcCccc-----------ccccccEEC-CCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceE
Confidence 34455666666431 123479998 899999997 999999999999987766532 124588
Q ss_pred Ec-CCceEEEEecC------CCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEE
Q 016446 149 IS-PGIMLLIFNRS------SSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELM 221 (389)
Q Consensus 149 fS-~g~~la~~~~~------s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~ 221 (389)
|| ||++||.++.+ +..+.+.|||+++|++. .+..|.+.+..++|+ |||.+||.. .|++|.+||+.+|++.
T Consensus 69 ~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~S-PdG~~la~~-~~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 69 ISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWS-PVGHKLAYV-WNNDIYVKIEPNLPSY 145 (740)
T ss_dssp ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEEC-SSTTCEEEE-ETTEEEEESSTTSCCE
T ss_pred ECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEEC-CCCCEEEEE-ECCeEEEEECCCCceE
Confidence 99 68888877532 11145679999999865 466677789999998 888888887 5789999999999877
Q ss_pred EE-cccCCCce-----------------EEEEEcCCCcEEEEEc-CC---------------------------------
Q 016446 222 EV-SRTEFMTP-----------------SAFIFLYENQLFLTFR-NR--------------------------------- 249 (389)
Q Consensus 222 ~~-l~gh~~~v-----------------~sv~fspdg~~laS~s-D~--------------------------------- 249 (389)
+. ..++...+ .+++|||||+.||..+ |.
T Consensus 146 ~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~ 225 (740)
T 4a5s_A 146 RITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVN 225 (740)
T ss_dssp ECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCC
T ss_pred EEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcC
Confidence 64 33443323 3489999999999886 43
Q ss_pred ---eEEEEeCCC---c---EEEEec------cCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCC
Q 016446 250 ---TVAVWNFRG---E---LVTSFE------DHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL 314 (389)
Q Consensus 250 ---tIklWd~~G---~---~l~tl~------gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~ 314 (389)
+|++||+++ . ....+. +|... +.+++|||||+++|..... .+++.+|++||+.
T Consensus 226 ~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~wspdg~~~~~~~~r-------~~~~~~i~~~d~~ 293 (740)
T 4a5s_A 226 PTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHY-----LCDVTWATQERISLQWLRR-------IQNYSVMDICDYD 293 (740)
T ss_dssp CEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEE-----EEEEEEEETTEEEEEEEES-------STTEEEEEEEEEE
T ss_pred CeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeE-----EEEEEEeCCCeEEEEEeCC-------CCCEEEEEEEECC
Confidence 478888865 3 333443 25544 7999999999988776542 2345689999999
Q ss_pred CCe----EEEE--e--cCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEE-Eec-CCCc-
Q 016446 315 TGK----CLAK--I--NATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIY-TGN-RHGL- 383 (389)
Q Consensus 315 tg~----~l~t--l--~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~La-Sgs-~D~t- 383 (389)
+|+ |... + .+|...+.. ....+++|||||+.|+ ..| .+|.
T Consensus 294 tg~~~~~~~~~~~l~~~~~~~~v~~-----------------------------~~~~~p~fspDG~~l~~~~s~~~G~~ 344 (740)
T 4a5s_A 294 ESSGRWNCLVARQHIEMSTTGWVGR-----------------------------FRPSEPHFTLDGNSFYKIISNEEGYR 344 (740)
T ss_dssp TTTTEEEECGGGCEEEECSSSCSSS-----------------------------SSCCCCEECTTSSEEEEEEECTTSCE
T ss_pred CCccccceeEEEEeeeccCCceEcc-----------------------------CcCCCceEcCCCCEEEEEEEcCCCce
Confidence 998 5432 2 445421000 0123688999999988 776 4554
Q ss_pred -EEEcc
Q 016446 384 -VHVWS 388 (389)
Q Consensus 384 -IrlW~ 388 (389)
|.+|+
T Consensus 345 ~l~~~~ 350 (740)
T 4a5s_A 345 HICYFQ 350 (740)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 44444
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.92 E-value=2e-23 Score=217.89 Aligned_cols=293 Identities=11% Similarity=-0.007 Sum_probs=199.7
Q ss_pred ccEEEEEeeccEEEEEec----CceEEEEecccceeeeeeecCCcceEE---------EEEEe--eCCCE-EEEEEEeec
Q 016446 4 TKVIEIVAARDIVFALAH----SGVCAAFSRETNRRICFLNVSPDEVIR---------SLFYN--KNNDS-LITVSVYAS 67 (389)
Q Consensus 4 ~~v~~i~~~~~~~a~~~~----~gtiklW~~~tg~~l~tl~~~~~~~v~---------sv~~s--pdg~~-l~s~s~~~~ 67 (389)
..|.++.++++.++-.+. +++.+||.+..+...+.|..+. ..++ +.+|+ |||+. |+.++ .
T Consensus 24 ~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~---~ 99 (662)
T 3azo_A 24 GRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAP-WNVRNRVFEYSGFPWAGVPRPAGGPLLVFTH---F 99 (662)
T ss_dssp SCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTT-CCBCCCGGGTCCCCEEEECCSSSSCEEEEEB---T
T ss_pred CccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCC-ccccccccccCCccceeeeecCCCeEEEEEE---C
Confidence 467889999665554444 8899999965566677788765 4555 56565 99999 77632 1
Q ss_pred CCCcceeeeeeeEeEec--c-CCCCCcceeEeee---cccCceeEEEecCCCeEEEEecCC----------CeEEEEeCC
Q 016446 68 DNFSSLKCRSTKIEYIR--R-GKPDSGFALFESE---SLKWPGFVEFDDVNGKVLTYSAQD----------SIYKVFDLK 131 (389)
Q Consensus 68 ~d~~~l~~~~~~l~~i~--~-g~~~~~~~l~~~~---~~~~~~~v~Fs~pdG~~Las~s~D----------~tiklWdl~ 131 (389)
.+ ..+.++++. . |+. ..+.... +...+..++|| |||+.|++++.| .+|++||+.
T Consensus 100 ~~------~~l~~~~~~~~g~~~~---~~l~~~~~~~~~~~~~~~~~s-pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 169 (662)
T 3azo_A 100 GD------QRLYAFEPDAPGGAVP---RPLTPVSAVGGGLRWADPVLL-PERGEVWCMAEEFTGEGPSDVRRFLAAVPLD 169 (662)
T ss_dssp TT------CCEEEECTTSTTCCCC---EECSCCCCSTTCEEEEEEEEE-TTTTEEEEEEEEECSSSTTCEEEEEEEEETT
T ss_pred CC------CeEEEEcCCCCCCCCC---EeccCCccCCCCccccCcEEC-CCCCEEEEEEecccCCCCCCceeEEEEEECC
Confidence 12 334444433 2 442 2222111 22345679998 999999999887 699999998
Q ss_pred C------CeEEEEe-c-CCcEEEEEEc-CCceEEEEecCC-----CCeeEEEEEcC-CC---eEEEEEeecCCceeEEEE
Q 016446 132 N------YTMLYSI-S-DKHVQEIKIS-PGIMLLIFNRSS-----SHVPLKILSIE-DG---TVLKVFYHLLHRNKKVDF 193 (389)
Q Consensus 132 ~------g~~l~tl-~-~~~V~~vafS-~g~~la~~~~~s-----~d~tiklWd~~-tG---~~l~tl~~~~~~~~~v~f 193 (389)
+ +++.... . ...+.+++|| ||++||.++.+. ...+|++||+. +| ++.....+|...+..++|
T Consensus 170 ~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~ 249 (662)
T 3azo_A 170 GSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEW 249 (662)
T ss_dssp STTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEE
T ss_pred CCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEE
Confidence 8 6654333 2 3578899999 688898776443 23689999999 68 555555566788899999
Q ss_pred EecCCCeEEEEeCCC--cEEEEECCCCeEEEEcccCCCc--------eEEEEEcCCCcEEEEEcCCeEEEE--eCCCcEE
Q 016446 194 IEQFNEKLLVKQENE--NLQILDVRNAELMEVSRTEFMT--------PSAFIFLYENQLFLTFRNRTVAVW--NFRGELV 261 (389)
Q Consensus 194 ~~~~~~~l~~~s~D~--tIklWd~~tg~~~~~l~gh~~~--------v~sv~fspdg~~laS~sD~tIklW--d~~G~~l 261 (389)
+ |++..++++..|+ .|.+||+.+|++.+.+.+|... +.+++|+|++++++++++++++|| |+++..+
T Consensus 250 s-pdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 328 (662)
T 3azo_A 250 A-PDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGEL 328 (662)
T ss_dssp C-TTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEE
T ss_pred C-CCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcE
Confidence 8 7777555566788 6666677788887776665543 578999999999998866999999 6665568
Q ss_pred EEeccCcCCcCCCCeeEEEECCCCCEE--EEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCC
Q 016446 262 TSFEDHLLWHPDCNTNNIYITSDQDLI--ISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATN 326 (389)
Q Consensus 262 ~tl~gh~~~~~~~~v~sv~fSpdG~~l--aS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~ 326 (389)
+.|..|... +.++. +|||+.+ ++++.+ ....|.+||+.+|++......|.
T Consensus 329 ~~l~~~~~~-----~~~~~-s~~~~~~~~~~~~~~---------~~~~i~~~d~~~g~~~~l~~~~~ 380 (662)
T 3azo_A 329 VDAAGPWTE-----WAATL-TVSGTRAVGVAASPR---------TAYEVVELDTVTGRARTIGARHT 380 (662)
T ss_dssp EECCSSCCE-----EEEEE-EEETTEEEEEEEETT---------EEEEEEEEETTTCCEEEEESCCC
T ss_pred EEecCCCCe-----EEEEE-ecCCCEEEEEEcCCC---------CCCEEEEEECCCCceEEeecCCc
Confidence 889888654 56661 4555543 343332 12356667887888755445554
No 166
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.92 E-value=5.3e-22 Score=185.61 Aligned_cols=238 Identities=11% Similarity=0.205 Sum_probs=184.8
Q ss_pred cccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEecC--------CcEEEEEEc-CCceEEEEecCCCCeeEEE
Q 016446 99 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--------KHVQEIKIS-PGIMLLIFNRSSSHVPLKI 169 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~~--------~~V~~vafS-~g~~la~~~~~s~d~tikl 169 (389)
.+..|.+++|+ |+|+++++.+.++.|++||.+ ++.+..+.. ..+.+++|+ +++.|.++.. +.++.|++
T Consensus 28 ~~~~p~~v~~~-~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~-~~~~~i~~ 104 (286)
T 1q7f_A 28 QFTEPSGVAVN-AQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTER-SPTHQIQI 104 (286)
T ss_dssp CBSCEEEEEEC-TTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEEC-GGGCEEEE
T ss_pred ccCCCceEEEC-CCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcC-CCCCEEEE
Confidence 34467889998 899999998999999999985 777766642 468999995 5555545432 12478999
Q ss_pred EEcCCCeEEEEEe-ecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcc--cCCCceEEEEEcCCCcEEEEE
Q 016446 170 LSIEDGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR--TEFMTPSAFIFLYENQLFLTF 246 (389)
Q Consensus 170 Wd~~tG~~l~tl~-~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~--gh~~~v~sv~fspdg~~laS~ 246 (389)
|| .+|+.+.++. .+......+++. +++..+++...++.|++||. .|+.+..+. ++...+..++|+|+|+++++.
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVD-NKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEEC-TTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred EC-CCCcEEEEecCccCCCceEEEEe-CCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 99 7889998885 233567889987 56665555568899999996 566666653 566789999999999999998
Q ss_pred c-CCeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCC
Q 016446 247 R-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 325 (389)
Q Consensus 247 s-D~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH 325 (389)
. ++.|++||.+|+.+.++..+... .....++|+|||+++++.+.+ .+.|++|| .+|+.+.++..|
T Consensus 182 ~~~~~i~~~~~~g~~~~~~~~~g~~---~~p~~i~~d~~G~l~v~~~~~----------~~~i~~~~-~~g~~~~~~~~~ 247 (286)
T 1q7f_A 182 NRAHCVKVFNYEGQYLRQIGGEGIT---NYPIGVGINSNGEILIADNHN----------NFNLTIFT-QDGQLISALESK 247 (286)
T ss_dssp GGGTEEEEEETTCCEEEEESCTTTS---CSEEEEEECTTCCEEEEECSS----------SCEEEEEC-TTSCEEEEEEES
T ss_pred CCCCEEEEEcCCCCEEEEEccCCcc---CCCcEEEECCCCCEEEEeCCC----------CEEEEEEC-CCCCEEEEEccc
Confidence 8 99999999999998888654211 126899999999999987543 13999999 569999988776
Q ss_pred CCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 326 NCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
.. ...+.+++|+|||+.+++ +.|++|++|+.
T Consensus 248 ~~--------------------------------~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~ 278 (286)
T 1q7f_A 248 VK--------------------------------HAQCFDVALMDDGSVVLA-SKDYRLYIYRY 278 (286)
T ss_dssp SC--------------------------------CSCEEEEEEETTTEEEEE-ETTTEEEEEEC
T ss_pred CC--------------------------------CCcceeEEECCCCcEEEE-CCCCeEEEEEc
Confidence 51 035789999999998888 57999999973
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.92 E-value=5e-22 Score=195.74 Aligned_cols=292 Identities=10% Similarity=0.071 Sum_probs=203.1
Q ss_pred cCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEee--e
Q 016446 21 HSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFES--E 98 (389)
Q Consensus 21 ~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~--~ 98 (389)
.|++|.+||.++|+.+.++..+. .. .++|||||+.|..+....+.....=.-..+.+||+.+++......+-.. .
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~-~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~ 105 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAF-NG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQ 105 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCE-EE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCC
T ss_pred ccCeEEEEECCCCeEEEEecCCC-CC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccc
Confidence 47899999999999999998763 55 9999999999998764321100000116788999887776222111000 0
Q ss_pred cccCceeEEEecCCCeEEEEecC--CCeEEEEeCCCCeEEEE-ecCCcEEEEEEcC-C-ceEEEEecCCCCeeEEEEEcC
Q 016446 99 SLKWPGFVEFDDVNGKVLTYSAQ--DSIYKVFDLKNYTMLYS-ISDKHVQEIKISP-G-IMLLIFNRSSSHVPLKILSIE 173 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~~Las~s~--D~tiklWdl~~g~~l~t-l~~~~V~~vafS~-g-~~la~~~~~s~d~tiklWd~~ 173 (389)
....|..++|| |||++|..+.. +++|.+||+++++.+.+ +.....+.+.+.| + ..+++.+ .|+++.+|++.
T Consensus 106 ~g~~p~~i~~s-pdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~---~dg~~~~v~~~ 181 (361)
T 2oiz_A 106 GLNYDGLFRQT-TDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTIC---GDGGLLTINLG 181 (361)
T ss_dssp BCCCGGGEEEC-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEE---TTSSEEEEEEC
T ss_pred cCCCcceEEEC-CCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEEC---CCCcEEEEEEC
Confidence 12457789998 99999987763 68999999999999988 7654455677775 3 4555443 34788899886
Q ss_pred C-CeEEEEEe------ecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeE--EEEcc--c----CC----CceEEE
Q 016446 174 D-GTVLKVFY------HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAEL--MEVSR--T----EF----MTPSAF 234 (389)
Q Consensus 174 t-G~~l~tl~------~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~--~~~l~--g----h~----~~v~sv 234 (389)
+ |++..... .+.++ ..+.++ +++..++..+.+++|.++|+..+.. ...+. . +. .....+
T Consensus 182 ~~g~~~~~~~~~~~~~~~~~~-~~~~~~-~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 259 (361)
T 2oiz_A 182 EDGKVASQSRSKQMFSVKDDP-IFIAPA-LDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLV 259 (361)
T ss_dssp TTSSEEEEEECCCCSCTTTSC-BCSCCE-ECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCE
T ss_pred CCCcEeeeccccceEcCCCCc-eEEEec-ccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEE
Confidence 5 77763321 11111 122333 5566777778899999999976542 22211 0 11 111237
Q ss_pred EEcCCCcEEEEE-c-----------CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCccccc
Q 016446 235 IFLYENQLFLTF-R-----------NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWM 301 (389)
Q Consensus 235 ~fspdg~~laS~-s-----------D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~ 301 (389)
+|+||++.+..+ . .++|.+||+. ++.+.++..|. + ++++|||||++|++++.
T Consensus 260 a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p------~~ia~spdg~~l~v~n~-------- 324 (361)
T 2oiz_A 260 GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-A------LSMTIDQQRNLMLTLDG-------- 324 (361)
T ss_dssp EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-C------CEEEEETTTTEEEEECS--------
T ss_pred EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-e------eEEEECCCCCEEEEeCC--------
Confidence 899997765543 3 2489999996 99999999876 4 79999999999998642
Q ss_pred CCCCCeEEEEeCCCC--eEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCE
Q 016446 302 EGSAGSINVSSILTG--KCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNE 374 (389)
Q Consensus 302 ~s~D~tIklWd~~tg--~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~ 374 (389)
++|.+||..+| ++++++.++. ..-+.++|+|||++
T Consensus 325 ----~~v~v~D~~t~~l~~~~~i~~~G----------------------------------~~P~~~~~~p~G~~ 361 (361)
T 2oiz_A 325 ----GNVNVYDISQPEPKLLRTIEGAA----------------------------------EASLQVQFHPVGGT 361 (361)
T ss_dssp ----SCEEEEECSSSSCEEEEEETTSC----------------------------------SSEEEEEECCCSCC
T ss_pred ----CeEEEEECCCCcceeeEEeccCC----------------------------------CCcEEEEecCCCCC
Confidence 79999999999 9999986654 46778999999974
No 168
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=2.2e-23 Score=211.03 Aligned_cols=204 Identities=8% Similarity=0.080 Sum_probs=158.5
Q ss_pred eeEEEecCCCeEEEEecCCCeEEEEeCCCC-----------eEE-----EEec-CCcEEEEEEc-CCceEEEEe-cCCCC
Q 016446 104 GFVEFDDVNGKVLTYSAQDSIYKVFDLKNY-----------TML-----YSIS-DKHVQEIKIS-PGIMLLIFN-RSSSH 164 (389)
Q Consensus 104 ~~v~Fs~pdG~~Las~s~D~tiklWdl~~g-----------~~l-----~tl~-~~~V~~vafS-~g~~la~~~-~~s~d 164 (389)
..++++ +++.+|+.++.|+ +++|+...- ... .+++ ...|.+++|| +|.+||++. +++.|
T Consensus 40 n~lavs-~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d 117 (434)
T 2oit_A 40 SLLAVS-NKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYG 117 (434)
T ss_dssp BCEEEE-TTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTE
T ss_pred cEEEEe-cCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCC
Confidence 358998 7888999999887 999875311 111 1222 3579999999 688888522 25678
Q ss_pred eeEEEEEcCCC--------e---EEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEE
Q 016446 165 VPLKILSIEDG--------T---VLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSA 233 (389)
Q Consensus 165 ~tiklWd~~tG--------~---~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~s 233 (389)
++|+|||+.++ + .++.+.+|...+..|+|++..+..+++++.|++|+|||+++++++....+|...|.+
T Consensus 118 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~ 197 (434)
T 2oit_A 118 SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTS 197 (434)
T ss_dssp EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEE
T ss_pred ceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeE
Confidence 99999999876 2 356667789999999998433678888999999999999999888778889999999
Q ss_pred EEEcCCCcEEEEEc-CCeEEEEeCCCcEEEEeccCcCCcC--CCCeeEEEECCCCCEEEEEecCCCcccccCCC---CCe
Q 016446 234 FIFLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHP--DCNTNNIYITSDQDLIISYCKAEPEDQWMEGS---AGS 307 (389)
Q Consensus 234 v~fspdg~~laS~s-D~tIklWd~~G~~l~tl~gh~~~~~--~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~---D~t 307 (389)
++|+|+|++||+++ |++|++||.+++..+++..|..... ...|.+++|+|++.++++++... +. ...
T Consensus 198 v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~d-------g~~~~~~~ 270 (434)
T 2oit_A 198 VCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAAD-------GTLETSPD 270 (434)
T ss_dssp EEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETT-------CCSSSCCE
T ss_pred EEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCC-------CccCCCCc
Confidence 99999999999999 9999999999888888876643211 01389999999999998776420 11 134
Q ss_pred EEEEeCCCC
Q 016446 308 INVSSILTG 316 (389)
Q Consensus 308 IklWd~~tg 316 (389)
+++||+...
T Consensus 271 v~i~~l~~~ 279 (434)
T 2oit_A 271 VVMALLPKK 279 (434)
T ss_dssp EEEEECCCT
T ss_pred eEEEEeccC
Confidence 999999754
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.91 E-value=1.6e-21 Score=188.40 Aligned_cols=244 Identities=12% Similarity=0.106 Sum_probs=187.4
Q ss_pred cccCceeEEEecCCCeEEEEecCC------------------------CeEEEEeCCCCeEEEEec-C--CcEEEEEEcC
Q 016446 99 SLKWPGFVEFDDVNGKVLTYSAQD------------------------SIYKVFDLKNYTMLYSIS-D--KHVQEIKISP 151 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~~Las~s~D------------------------~tiklWdl~~g~~l~tl~-~--~~V~~vafS~ 151 (389)
.++.|.+|+|+ |+|+++++.+.+ ++|.+||..+|+.+..+. . .....|+|+|
T Consensus 22 ~l~~v~~va~d-~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 22 LPGQVSGVALD-SKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CCSCEEEEEEC-TTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT
T ss_pred ecCCceEEEEC-CCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC
Confidence 34567889998 899999998887 489999999999887765 2 4789999994
Q ss_pred -CceEEEEecCCCCeeEEEEEcCCCe--EEEEEe---------ecCCceeEEEEEec-CCCeEEEEe-CCCcEEEEECCC
Q 016446 152 -GIMLLIFNRSSSHVPLKILSIEDGT--VLKVFY---------HLLHRNKKVDFIEQ-FNEKLLVKQ-ENENLQILDVRN 217 (389)
Q Consensus 152 -g~~la~~~~~s~d~tiklWd~~tG~--~l~tl~---------~~~~~~~~v~f~~~-~~~~l~~~s-~D~tIklWd~~t 217 (389)
|.++ ++. ..++.|++||.. |+ .+.++. .+......|+|. | ++..+++.+ .++.|++|| .+
T Consensus 101 ~g~l~-v~d--~~~~~v~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~-~~~g~lyv~d~~~~~~I~~~~-~~ 174 (329)
T 3fvz_A 101 DGNYW-VTD--VALHQVFKLDPH-SKEGPLLILGRSMQPGSDQNHFCQPTDVAVE-PSTGAVFVSDGYCNSRIVQFS-PS 174 (329)
T ss_dssp TSCEE-EEE--TTTTEEEEECTT-CSSCCSEEESBTTBCCCSTTCCSSEEEEEEC-TTTCCEEEEECSSCCEEEEEC-TT
T ss_pred CCCEE-EEE--CCCCEEEEEeCC-CCeEEEEEecccCCCCCCccccCCCcEEEEe-CCCCeEEEEeCCCCCeEEEEc-CC
Confidence 6654 442 445799999964 55 677773 344466889997 5 455556665 699999999 57
Q ss_pred CeEEEEcc----------cCCCceEEEEEcCC-CcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCC
Q 016446 218 AELMEVSR----------TEFMTPSAFIFLYE-NQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSD 284 (389)
Q Consensus 218 g~~~~~l~----------gh~~~v~sv~fspd-g~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpd 284 (389)
|+.+.++. ++...+..++|+|+ |+++++.. +++|++||.+ |+++.++...... ..+.+++|+|
T Consensus 175 g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~---~~~~~~~~~p- 250 (329)
T 3fvz_A 175 GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFG---RNVFAISYIP- 250 (329)
T ss_dssp SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTT---TCEEEEEEET-
T ss_pred CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccC---CCcceeeecC-
Confidence 88887774 34456999999998 89999988 9999999998 9999998643221 1268999999
Q ss_pred CCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEE
Q 016446 285 QDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDIT 364 (389)
Q Consensus 285 G~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 364 (389)
|..+++.+. ..++.+.+.+|++||+.+|+++.++.... +++..+.
T Consensus 251 g~~~~~~g~----~~v~~~~~~~v~~~~~~~g~~~~~~~~~~-------------------------------~~~~~p~ 295 (329)
T 3fvz_A 251 GFLFAVNGK----PYFGDQEPVQGFVMNFSSGEIIDVFKPVR-------------------------------KHFDMPH 295 (329)
T ss_dssp TEEEEEECC----CCTTCSCCCCEEEEETTTCCEEEEECCSS-------------------------------SCCSSEE
T ss_pred CEEEEeCCC----EEeccCCCcEEEEEEcCCCeEEEEEcCCC-------------------------------CccCCee
Confidence 655555432 22445566899999999999999985211 0115789
Q ss_pred EEEECCCCCEEEEecCCCcEEEcc
Q 016446 365 SLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 365 svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
+|+|+|||+++++...++.|++|+
T Consensus 296 ~ia~~~dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 296 DIVASEDGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp EEEECTTSEEEEEESSSCCEEEEE
T ss_pred EEEECCCCCEEEEECCCCEEEEEe
Confidence 999999999999999999999997
No 170
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=6e-23 Score=207.77 Aligned_cols=211 Identities=9% Similarity=-0.010 Sum_probs=161.0
Q ss_pred CeEEEEeCCCCeEEEEecCCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCC-----------eEE-----EEEeecC
Q 016446 123 SIYKVFDLKNYTMLYSISDKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDG-----------TVL-----KVFYHLL 185 (389)
Q Consensus 123 ~tiklWdl~~g~~l~tl~~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG-----------~~l-----~tl~~~~ 185 (389)
++||+|+.. .. ++...+..++++ .+.++++++.+ + +++|+...- ... .++ .|.
T Consensus 23 ~~vri~~~~-~~----~~~~~~n~lavs~~~~~l~~~~~d---g-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 92 (434)
T 2oit_A 23 KKVRIFDSP-EE----LPKERSSLLAVSNKYGLVFAGGAS---G-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMK 92 (434)
T ss_dssp CEEECSCCC-SS----CCCSCCBCEEEETTTTEEEEEETT---E-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCS
T ss_pred eeEEecCCc-cc----cCCCCccEEEEecCCCEEEEECCC---E-EEEEEchHhhhhcccccCcccccccCccccc-cCC
Confidence 578999752 22 344568889999 57888776433 4 899875310 111 122 244
Q ss_pred CceeEEEEEecCCCeEE----EEeCCCcEEEEECCCC--------e---EEEEcccCCCceEEEEEcCC-CcEEEEEc-C
Q 016446 186 HRNKKVDFIEQFNEKLL----VKQENENLQILDVRNA--------E---LMEVSRTEFMTPSAFIFLYE-NQLFLTFR-N 248 (389)
Q Consensus 186 ~~~~~v~f~~~~~~~l~----~~s~D~tIklWd~~tg--------~---~~~~l~gh~~~v~sv~fspd-g~~laS~s-D 248 (389)
..+..++|+ |++.+|+ +++.|++|+|||++++ + .++.+.+|...|.+++|+|+ +++||+++ |
T Consensus 93 ~~v~~l~~s-pdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D 171 (434)
T 2oit_A 93 FPIHHLALS-CDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD 171 (434)
T ss_dssp SCEEEEEEC-TTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT
T ss_pred CcccEEEEc-CCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC
Confidence 668999998 7888888 6779999999999876 2 26778899999999999998 89999998 9
Q ss_pred CeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCC
Q 016446 249 RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNC 327 (389)
Q Consensus 249 ~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~ 327 (389)
++|++||+. ++++....+|... |.+++|||||++||+|+.| |+|++||+. ++...++..|..
T Consensus 172 g~v~iwD~~~~~~~~~~~~~~~~-----v~~v~wspdg~~lasgs~d-----------g~v~iwd~~-~~~~~~~~~~~~ 234 (434)
T 2oit_A 172 GSIAVLQVTETVKVCATLPSTVA-----VTSVCWSPKGKQLAVGKQN-----------GTVVQYLPT-LQEKKVIPCPPF 234 (434)
T ss_dssp SCEEEEEESSSEEEEEEECGGGC-----EEEEEECTTSSCEEEEETT-----------SCEEEECTT-CCEEEEECCCTT
T ss_pred CeEEEEEcCCCcceeeccCCCCc-----eeEEEEcCCCCEEEEEcCC-----------CcEEEEccC-CcccccccCCcc
Confidence 999999997 8777777788765 8999999999999999865 999999988 888888887752
Q ss_pred CCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEec-CCC------cEEEcc
Q 016446 328 SPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGN-RHG------LVHVWS 388 (389)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs-~D~------tIrlW~ 388 (389)
. ..+|...|.+++|+|++.++++.+ .|| .+++|+
T Consensus 235 ~---------------------------~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~ 275 (434)
T 2oit_A 235 Y---------------------------ESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMAL 275 (434)
T ss_dssp C---------------------------CTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEE
T ss_pred c---------------------------CCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEE
Confidence 0 001113799999999999886533 443 388886
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.90 E-value=2.5e-22 Score=194.42 Aligned_cols=277 Identities=9% Similarity=0.048 Sum_probs=185.9
Q ss_pred EEee--ccEEEEEec-Cce--EEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEe
Q 016446 9 IVAA--RDIVFALAH-SGV--CAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYI 83 (389)
Q Consensus 9 i~~~--~~~~a~~~~-~gt--iklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i 83 (389)
..|+ |+.||..+. +|. +.+|++++|+..+...++ ...+.+++|||||+.|+.++ .+ ..+++|++
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~-~~~~~~~~~spdg~~l~~~~----~~------~~l~~~d~ 109 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGR-GDNTFGGFLSPDDDALFYVK----DG------RNLMRVDL 109 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSS-CBCSSSCEECTTSSEEEEEE----TT------TEEEEEET
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCC-CCCccceEEcCCCCEEEEEe----CC------CeEEEEEC
Confidence 5577 888888887 774 777898888877665554 35566789999999999854 45 68889999
Q ss_pred ccCCCCCcceeEeeecccCcee--EEEecCCCeEEEE----------------------ecCCCeEEEEeCCCCeEEEEe
Q 016446 84 RRGKPDSGFALFESESLKWPGF--VEFDDVNGKVLTY----------------------SAQDSIYKVFDLKNYTMLYSI 139 (389)
Q Consensus 84 ~~g~~~~~~~l~~~~~~~~~~~--v~Fs~pdG~~Las----------------------~s~D~tiklWdl~~g~~l~tl 139 (389)
.+|+. ..++. ....++.. ..++ |||++|+. .+.+..|.+||+.+|+.....
T Consensus 110 ~~g~~---~~~~~-~~~~~~~~~~~~~~-~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 184 (388)
T 3pe7_A 110 ATLEE---NVVYQ-VPAEWVGYGTWVAN-SDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL 184 (388)
T ss_dssp TTCCE---EEEEE-CCTTEEEEEEEEEC-TTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE
T ss_pred CCCcc---eeeee-chhhcccccceeEC-CCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee
Confidence 88875 33433 11122222 3456 89999884 335688999999999865433
Q ss_pred c-CCcEEEEEEcC--CceEEEEecCCC---CeeEEEEEcCCCeEEEEEeecC--CceeEEEEEecCCCeEEEEe-C-C--
Q 016446 140 S-DKHVQEIKISP--GIMLLIFNRSSS---HVPLKILSIEDGTVLKVFYHLL--HRNKKVDFIEQFNEKLLVKQ-E-N-- 207 (389)
Q Consensus 140 ~-~~~V~~vafS~--g~~la~~~~~s~---d~tiklWd~~tG~~l~tl~~~~--~~~~~v~f~~~~~~~l~~~s-~-D-- 207 (389)
. ...+..++||| |++||..+.... ...|.++|+.+++ ++.+..+. ..+..++|+ |++..|+..+ . +
T Consensus 185 ~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~ 262 (388)
T 3pe7_A 185 QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-MRKVKTHAEGESCTHEFWV-PDGSALVYVSYLKGSP 262 (388)
T ss_dssp EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-CEESCCCCTTEEEEEEEEC-TTSSCEEEEEEETTCC
T ss_pred cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-eEEeeeCCCCcccccceEC-CCCCEEEEEecCCCCC
Confidence 3 56799999998 667776654321 3478888876654 44554333 246778898 7888887754 2 2
Q ss_pred -CcEEEEECCCCeEEE--EcccCCCc---eEEEEEcCCCcEEEEE---------c-CCeEEEEeCCCcEEEEeccCcC-C
Q 016446 208 -ENLQILDVRNAELME--VSRTEFMT---PSAFIFLYENQLFLTF---------R-NRTVAVWNFRGELVTSFEDHLL-W 270 (389)
Q Consensus 208 -~tIklWd~~tg~~~~--~l~gh~~~---v~sv~fspdg~~laS~---------s-D~tIklWd~~G~~l~tl~gh~~-~ 270 (389)
.+|.+||+++|+... .+.++... +..++|+|||+.|+.. . +..|.+||+++..++.|..|.. +
T Consensus 263 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 342 (388)
T 3pe7_A 263 DRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSW 342 (388)
T ss_dssp CEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCC
T ss_pred cceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcc
Confidence 249999999998543 33432111 1123799999988853 4 6799999998555566776654 1
Q ss_pred c-----CCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeC
Q 016446 271 H-----PDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSI 313 (389)
Q Consensus 271 ~-----~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~ 313 (389)
. ....+.+++|||||++|+..+.. ++...||.+
T Consensus 343 ~~~~~~~~~~~~~~~~spDg~~l~~~s~~----------~g~~~l~~~ 380 (388)
T 3pe7_A 343 KVFEGDRQVTHPHPSFTPDDKQILFTSDV----------HGKPALYLA 380 (388)
T ss_dssp CCBTTBSSTTCCCCEECTTSSEEEEEECT----------TSSCEEEEE
T ss_pred cccccccccCCCCccCCCCCCEEEEEecC----------CCceeEEEE
Confidence 0 00015789999999999988743 466666643
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.89 E-value=2.2e-20 Score=178.39 Aligned_cols=265 Identities=11% Similarity=0.095 Sum_probs=186.8
Q ss_pred ceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCC--
Q 016446 45 EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD-- 122 (389)
Q Consensus 45 ~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D-- 122 (389)
..+..+++ ||+.|+.+....... ..-....+.+|++..|+. ..+ ..+..++|| |||+.||..+.+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~-~~~~~~~l~~~d~~~~~~---~~l------~~~~~~~~S-pDg~~la~~~~~~~ 81 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLK-DNKYENTIVIENLKNNAR---RFI------ENATMPRIS-PDGKKIAFMRANEE 81 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETT-TTEEEEEEEEEETTTCCE---EEE------ESCEEEEEC-TTSSEEEEEEEETT
T ss_pred EEcccceE--CCcEEEEEEeecCcc-cCCccceEEEEeCCCCce---EEc------ccCCCeEEC-CCCCEEEEEEeccC
Confidence 56778888 999998865432111 111236788888887764 223 345679998 999999988764
Q ss_pred -C--eEEEEeCCCCeEEEEec-CCcEEEEEEc-CCceEEEEecC------------------------CCCeeEEEEEcC
Q 016446 123 -S--IYKVFDLKNYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRS------------------------SSHVPLKILSIE 173 (389)
Q Consensus 123 -~--tiklWdl~~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~------------------------s~d~tiklWd~~ 173 (389)
+ .|.+||+.+|+...... .. +.+++|| +|+.||.++.. .....|.+||+.
T Consensus 82 ~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~ 160 (347)
T 2gop_A 82 KKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTE 160 (347)
T ss_dssp TTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETT
T ss_pred CCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECC
Confidence 3 47788898888654443 34 9999999 68888877532 113689999999
Q ss_pred CCeEEEEEeecCCceeEEEEEecCCCeEEEEeCC------C-cEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEE
Q 016446 174 DGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQEN------E-NLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTF 246 (389)
Q Consensus 174 tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D------~-tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~ 246 (389)
+|++++.+.. . .+..++|+ |++ .++++..+ . ..+||.+.+|++.+.. .+ ..+.++ ||||+.|+..
T Consensus 161 ~~~~~~~l~~-~-~~~~~~~s-pdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~-~~-~~~~~~--spdg~~l~~~ 232 (347)
T 2gop_A 161 SEEVIEEFEK-P-RFSSGIWH-RDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMF-EK-VSFYAV--DSDGERILLY 232 (347)
T ss_dssp TTEEEEEEEE-E-TTCEEEEE-TTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEE-EE-ESEEEE--EECSSCEEEE
T ss_pred CCeEEeeecC-C-CcccccCC-CCe-EEEEEecccccccccccccEEEeCCCceEEec-cC-cceeeE--CCCCCEEEEE
Confidence 9998677765 3 78899998 666 55555544 2 5566655577765443 34 555554 9999998877
Q ss_pred c-CC--------eEEEEeCCCcEEEEeccCcCCcCCCCeeE-EEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCC
Q 016446 247 R-NR--------TVAVWNFRGELVTSFEDHLLWHPDCNTNN-IYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTG 316 (389)
Q Consensus 247 s-D~--------tIklWd~~G~~l~tl~gh~~~~~~~~v~s-v~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg 316 (389)
+ +. .|.+|| .|++...+.+|... +.. ++|+ || ++++++.+ ++++|| +.+|
T Consensus 233 ~~~~~~~~~~~~~l~~~d-~~~~~~l~~~~~~~-----~~~~~~~s-dg-~~~~~~~~-----------~~~~l~-~~~g 292 (347)
T 2gop_A 233 GKPEKKYMSEHNKLYIYD-GKEVMGILDEVDRG-----VGQAKIKD-GK-VYFTLFEE-----------GSVNLY-IWDG 292 (347)
T ss_dssp ECCSSSCCCSSCEEEEEC-SSCEEESSTTCCSE-----EEEEEEET-TE-EEEEEEET-----------TEEEEE-EESS
T ss_pred EccccCCccccceEEEEC-CCceEeccccCCcc-----cCCccEEc-Cc-EEEEEecC-----------CcEEEE-EcCC
Confidence 6 43 677788 77766555555543 676 9999 99 88888764 899999 8878
Q ss_pred eEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcE-EEcc
Q 016446 317 KCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLV-HVWS 388 (389)
Q Consensus 317 ~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tI-rlW~ 388 (389)
++...+ .+. ..|.+++|+| +++++++.+++. +||.
T Consensus 293 ~~~~~~-~~~----------------------------------~~v~~~~~s~--~~~~~~~~~~~~~~l~~ 328 (347)
T 2gop_A 293 EIKPIA-KGR----------------------------------HWIMGFDVDE--IVVYLKETATRLRELFT 328 (347)
T ss_dssp SEEEEE-CSS----------------------------------SEEEEEEESS--SEEEEEECSSSCCEEEE
T ss_pred ceEEEe-cCC----------------------------------CeEEeeeeeC--cEEEEEcCCCChHHheE
Confidence 775444 344 4799999999 788888877765 7874
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.88 E-value=8.2e-20 Score=174.37 Aligned_cols=273 Identities=11% Similarity=0.097 Sum_probs=186.1
Q ss_pred EEEEEeeccEEEEEe---------cCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeee
Q 016446 6 VIEIVAARDIVFALA---------HSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCR 76 (389)
Q Consensus 6 v~~i~~~~~~~a~~~---------~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~ 76 (389)
|.+..+-|+.||... .++.+.+|++++|+. +.| ..+.+++|||||+.|+.++...+.. -.
T Consensus 17 ~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l-----~~~~~~~~SpDg~~la~~~~~~~~~-----~~ 85 (347)
T 2gop_A 17 LSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNAR-RFI-----ENATMPRISPDGKKIAFMRANEEKK-----VS 85 (347)
T ss_dssp EEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE-EEE-----ESCEEEEECTTSSEEEEEEEETTTT-----EE
T ss_pred cccceECCcEEEEEEeecCcccCCccceEEEEeCCCCce-EEc-----ccCCCeEECCCCCEEEEEEeccCCC-----cc
Confidence 444444677776653 367899999987764 344 3468899999999999977543111 14
Q ss_pred eeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCC---------------------------CeEEEEe
Q 016446 77 STKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD---------------------------SIYKVFD 129 (389)
Q Consensus 77 ~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D---------------------------~tiklWd 129 (389)
++.++++..|+. ..+.... . +..++|| |||+.|+.++.+ ..|.+||
T Consensus 86 ~l~~~~~~~g~~---~~l~~~~--~-~~~~~ws-pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d 158 (347)
T 2gop_A 86 EIWVADLETLSS---KKILEAK--N-IRSLEWN-EDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFD 158 (347)
T ss_dssp EEEEEETTTTEE---EEEEEES--E-EEEEEEC-TTSSEEEEEEECCCC---------CCCC---------CEEEEEEEE
T ss_pred eEEEEECCCCce---EEEEcCC--C-ccceeEC-CCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEE
Confidence 677778777764 3343322 2 5789998 999999988743 5799999
Q ss_pred CCCCeEEEEecCCcEEEEEEcCCceEEEEecCCCC---e-eEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEe
Q 016446 130 LKNYTMLYSISDKHVQEIKISPGIMLLIFNRSSSH---V-PLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ 205 (389)
Q Consensus 130 l~~g~~l~tl~~~~V~~vafS~g~~la~~~~~s~d---~-tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s 205 (389)
+.+|+++..+....+..++|||+.+++++..+..+ . ..+||.+.+|++ +.+..+ ..+..+ + |++.+|+..+
T Consensus 159 ~~~~~~~~~l~~~~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~--s-pdg~~l~~~~ 233 (347)
T 2gop_A 159 TESEEVIEEFEKPRFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAV--D-SDGERILLYG 233 (347)
T ss_dssp TTTTEEEEEEEEETTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEE--E-ECSSCEEEEE
T ss_pred CCCCeEEeeecCCCcccccCCCCeEEEEEecccccccccccccEEEeCCCce-EEeccC-cceeeE--C-CCCCEEEEEE
Confidence 99998743333127889999964455554332210 1 345554446665 444444 444443 4 7888888876
Q ss_pred CC--------CcEEEEECCCCeEEEEcccCCCceEE-EEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCC
Q 016446 206 EN--------ENLQILDVRNAELMEVSRTEFMTPSA-FIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDC 274 (389)
Q Consensus 206 ~D--------~tIklWd~~tg~~~~~l~gh~~~v~s-v~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~ 274 (389)
.+ ..|.+|| +|++.+.+.+|...+.. ++|+ || ++++++ |++++|| ++ |++...+. +...
T Consensus 234 ~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~-~~~~---- 303 (347)
T 2gop_A 234 KPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAK-GRHW---- 303 (347)
T ss_dssp CCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEEC-SSSE----
T ss_pred ccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEec-CCCe----
Confidence 43 4688888 88887777888888986 9999 98 888888 9999999 86 87755444 3333
Q ss_pred CeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCC
Q 016446 275 NTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATN 326 (389)
Q Consensus 275 ~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~ 326 (389)
|.+++|+| +++++++.+ +...+||.+. |+ +..|..|.
T Consensus 304 -v~~~~~s~--~~~~~~~~~----------~~~~~l~~~~-g~-~~~lt~~n 340 (347)
T 2gop_A 304 -IMGFDVDE--IVVYLKETA----------TRLRELFTWD-GE-EKQLTDYN 340 (347)
T ss_dssp -EEEEEESS--SEEEEEECS----------SSCCEEEEES-SS-EEECCCTT
T ss_pred -EEeeeeeC--cEEEEEcCC----------CChHHheEeC-Cc-EEEecccc
Confidence 78999999 788877654 2333777776 66 55688776
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.88 E-value=2.1e-20 Score=195.11 Aligned_cols=286 Identities=7% Similarity=-0.031 Sum_probs=192.0
Q ss_pred eeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCce---------eEEE
Q 016446 38 FLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPG---------FVEF 108 (389)
Q Consensus 38 tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~---------~v~F 108 (389)
.+.++ ...+.+++|++++ ++.++.....+ ....||.+..+.. ...+..+. ..+. .++|
T Consensus 18 ~~~~~-~~~~~~~~~s~~~--~~~~~~~~~~~------~~~~l~~~~~~~~--~~~l~~~~--~~~~~~~~~~~~~~~~~ 84 (662)
T 3azo_A 18 LVASR-SGRPACVGAVGDE--VWWVAPRPAEA------GRATLVRRRADGA--EESALPAP--WNVRNRVFEYSGFPWAG 84 (662)
T ss_dssp HHHHT-CSCCEEEEEETTE--EEEEEEETTTT------TEEEEEEECTTSC--EEESSCTT--CCBCCCGGGTCCCCEEE
T ss_pred HHhhc-CCccceeEEcCCe--EEEEecCcccC------CcEEEEEECCCCC--cceeCCCC--ccccccccccCCcccee
Confidence 45555 4789999999764 44444322445 4667777543321 11111100 1112 3556
Q ss_pred e-cCCCeE-EEEecC-CCeEEEEeCC--C-CeEEEEec-------CCcEEEEEEc-CCceEEEEecC-------CCCeeE
Q 016446 109 D-DVNGKV-LTYSAQ-DSIYKVFDLK--N-YTMLYSIS-------DKHVQEIKIS-PGIMLLIFNRS-------SSHVPL 167 (389)
Q Consensus 109 s-~pdG~~-Las~s~-D~tiklWdl~--~-g~~l~tl~-------~~~V~~vafS-~g~~la~~~~~-------s~d~ti 167 (389)
+ +|||+. ||.++. +..|.+|++. + ++ ...+. ...+.+++|| ||++||+++.+ ....+|
T Consensus 85 ~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i 163 (662)
T 3azo_A 85 VPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFL 163 (662)
T ss_dssp ECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEE
T ss_pred eeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEE
Confidence 5 289998 886654 5566666664 2 44 33343 2468899999 68899887644 222689
Q ss_pred EEEEcCC------CeEEEEEe-ecCCceeEEEEEecCCCeEEEEeCC--------CcEEEEECC-CC---eEEEEcccCC
Q 016446 168 KILSIED------GTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQEN--------ENLQILDVR-NA---ELMEVSRTEF 228 (389)
Q Consensus 168 klWd~~t------G~~l~tl~-~~~~~~~~v~f~~~~~~~l~~~s~D--------~tIklWd~~-tg---~~~~~l~gh~ 228 (389)
++||+.+ |++ +.+. .+...+..++|+ ||+.+|+..+.| .+|.+||+. +| ++.+...+|.
T Consensus 164 ~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~S-pDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~ 241 (662)
T 3azo_A 164 AAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLS-PDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE 241 (662)
T ss_dssp EEEETTSTTTTCGGGS-EESSCSCSSEECCCEEC-TTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT
T ss_pred EEEECCCCccccCCce-eEEEecCCCcccCceEC-CCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC
Confidence 9999988 665 4454 455677889998 889999987754 389999999 68 6666667778
Q ss_pred CceEEEEEcCCCcEEEEEc-CC--eEEEEeCC-CcEEEEeccCcC-----CcCCCCeeEEEECCCCCEEEEEecCCCccc
Q 016446 229 MTPSAFIFLYENQLFLTFR-NR--TVAVWNFR-GELVTSFEDHLL-----WHPDCNTNNIYITSDQDLIISYCKAEPEDQ 299 (389)
Q Consensus 229 ~~v~sv~fspdg~~laS~s-D~--tIklWd~~-G~~l~tl~gh~~-----~~~~~~v~sv~fSpdG~~laS~s~D~~~~~ 299 (389)
..+..++|+|||++++++. |+ .|.+||+. |++.+.+.+|.. |.++ +.+++|+|||+++++++
T Consensus 242 ~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~--~~~~~~~~~~~~~~~~~------- 312 (662)
T 3azo_A 242 EAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPG--MRWFAPLANGLIAVVHG------- 312 (662)
T ss_dssp BCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTT--CCSEEECTTSCEEEEEB-------
T ss_pred ceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCcccccc--CceEeEeCCCEEEEEEE-------
Confidence 8999999999999888887 88 56666664 666544443322 1111 46899999999999874
Q ss_pred ccCCCCCeEEEE--eCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEE-EECCCCCEEE
Q 016446 300 WMEGSAGSINVS--SILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSL-FYDEERNEIY 376 (389)
Q Consensus 300 ~~~s~D~tIklW--d~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~sv-afSpdg~~La 376 (389)
. ++++|| |+.+|+ ++.|..|. ..|.++ ++++++-.++
T Consensus 313 ----~-~~~~l~~~d~~~~~-~~~l~~~~----------------------------------~~~~~~~s~~~~~~~~~ 352 (662)
T 3azo_A 313 ----K-GAAVLGILDPESGE-LVDAAGPW----------------------------------TEWAATLTVSGTRAVGV 352 (662)
T ss_dssp ----S-SSCEEEEEETTTTE-EEECCSSC----------------------------------CEEEEEEEEETTEEEEE
T ss_pred ----c-CccEEEEEECCCCc-EEEecCCC----------------------------------CeEEEEEecCCCEEEEE
Confidence 3 688999 766565 78888876 367777 6666555666
Q ss_pred EecCCCcEEEcc
Q 016446 377 TGNRHGLVHVWS 388 (389)
Q Consensus 377 Sgs~D~tIrlW~ 388 (389)
+++.+...+||.
T Consensus 353 ~~~~~~~~~i~~ 364 (662)
T 3azo_A 353 AASPRTAYEVVE 364 (662)
T ss_dssp EEETTEEEEEEE
T ss_pred EcCCCCCCEEEE
Confidence 777777777763
No 175
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.87 E-value=2.6e-20 Score=183.52 Aligned_cols=263 Identities=14% Similarity=0.110 Sum_probs=183.1
Q ss_pred eeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEec----------CCCeEEEEeCCCCeEEEEec-----
Q 016446 76 RSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA----------QDSIYKVFDLKNYTMLYSIS----- 140 (389)
Q Consensus 76 ~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s----------~D~tiklWdl~~g~~l~tl~----- 140 (389)
..+.+||..+|++.. .+ ..-..+ .++|| |||++|..+. .|++|.+||+.+++.+.++.
T Consensus 31 ~~v~v~D~~t~~~~~--~i---~~g~~p-~i~~s-pdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~ 103 (361)
T 2oiz_A 31 SRVHVYDYTNGKFLG--MV---PTAFNG-HVQVS-NDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKR 103 (361)
T ss_dssp CEEEEEETTTCCEEE--EE---ECCEEE-EEEEC-TTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTB
T ss_pred CeEEEEECCCCeEEE--Ee---cCCCCC-ceEEC-CCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccc
Confidence 688899988888621 11 111234 79998 9999988775 36789999999999887764
Q ss_pred ---CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEE-EeecCCceeEEEEEecCC-CeEEEEeCCCcEEEEE
Q 016446 141 ---DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKV-FYHLLHRNKKVDFIEQFN-EKLLVKQENENLQILD 214 (389)
Q Consensus 141 ---~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~t-l~~~~~~~~~v~f~~~~~-~~l~~~s~D~tIklWd 214 (389)
+.....++|| +|++|+++... .+++|.+||+++++.+.+ +.. +....+.+. |++ ..+++.+.|+++.+|+
T Consensus 104 ~~~g~~p~~i~~spdg~~l~v~n~~-~~~~v~v~d~~~~~~~~~~i~~--~~~~~v~~~-p~~~~~~~~~~~dg~~~~v~ 179 (361)
T 2oiz_A 104 VQGLNYDGLFRQTTDGKFIVLQNAS-PATSIGIVDVAKGDYVEDVTAA--AGCWSVIPQ-PNRPRSFMTICGDGGLLTIN 179 (361)
T ss_dssp CCBCCCGGGEEECTTSSEEEEEEES-SSEEEEEEETTTTEEEEEEGGG--TTEEEEEEC-TTSSSEEEEEETTSSEEEEE
T ss_pred cccCCCcceEEECCCCCEEEEECCC-CCCeEEEEECCCCcEEEEEecC--CCcceeEEc-CCCCeeEEEECCCCcEEEEE
Confidence 1356789999 68888877532 247999999999999988 652 233445555 444 5667778999999999
Q ss_pred CCC-CeEEE------EcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-Cc--EEEEec------cCcCCcCCCCee
Q 016446 215 VRN-AELME------VSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GE--LVTSFE------DHLLWHPDCNTN 277 (389)
Q Consensus 215 ~~t-g~~~~------~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~--~l~tl~------gh~~~~~~~~v~ 277 (389)
+.. |+... .+..+...+ .+.++|+|..++..+ +++|.++|+. ++ .+.+++ .+..+.+.. ..
T Consensus 180 ~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g-~~ 257 (361)
T 2oiz_A 180 LGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGG-YN 257 (361)
T ss_dssp ECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECC-SS
T ss_pred ECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCC-ee
Confidence 875 76652 233333332 345688888888777 9999999996 33 233322 111111110 13
Q ss_pred EEEECCCCCEEEEEec-CCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceeccc
Q 016446 278 NIYITSDQDLIISYCK-AEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTV 356 (389)
Q Consensus 278 sv~fSpdG~~laS~s~-D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (389)
.++|+|||++|..+.. +.. ........++|.+||+.+++.++++..|
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~-~~~~~~~~~~v~viD~~t~~~v~~i~~~------------------------------- 305 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGK-EGTHKFPAAEIWVMDTKTKQRVARIPGR------------------------------- 305 (361)
T ss_dssp CEEEETTTTEEEEEEESSCC-TTCTTCCCSEEEEEETTTTEEEEEEECT-------------------------------
T ss_pred EEEEecCCCeEEEEEccCCC-cccccCCCceEEEEECCCCcEEEEEecC-------------------------------
Confidence 4899999988877643 100 0000001358999999999999999876
Q ss_pred ccccCCEEEEEECCCCCEEEEecCCCcEEEccC
Q 016446 357 GEALEDITSLFYDEERNEIYTGNRHGLVHVWSN 389 (389)
Q Consensus 357 ~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~~ 389 (389)
. +++++|||||++|++++. ++|.+||.
T Consensus 306 ----~-p~~ia~spdg~~l~v~n~-~~v~v~D~ 332 (361)
T 2oiz_A 306 ----D-ALSMTIDQQRNLMLTLDG-GNVNVYDI 332 (361)
T ss_dssp ----T-CCEEEEETTTTEEEEECS-SCEEEEEC
T ss_pred ----C-eeEEEECCCCCEEEEeCC-CeEEEEEC
Confidence 3 678999999999999997 99999983
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.86 E-value=5.8e-21 Score=184.23 Aligned_cols=281 Identities=8% Similarity=0.029 Sum_probs=182.5
Q ss_pred EEEEEee--ccEEEEEecC---ceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 6 VIEIVAA--RDIVFALAHS---GVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 6 v~~i~~~--~~~~a~~~~~---gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
+.++.|+ |+.||..... ..+.+|++++|+... +..++......++|||||+.|+.++ .+ .++++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~spdg~~l~~~~----~~------~~l~~ 106 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ-LTEGKGDNTFGGFISTDERAFFYVK----NE------LNLMK 106 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE-CCCSSCBCTTTCEECTTSSEEEEEE----TT------TEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE-eecCCCCccccceECCCCCEEEEEE----cC------CcEEE
Confidence 3455677 7887766543 367888998777654 4443323333488999999998854 44 46888
Q ss_pred eEeccCCCCCcceeEeeecccCcee-------------------EEEecCCCeEEEEe-----cCCCeEEEEeCCCCeEE
Q 016446 81 EYIRRGKPDSGFALFESESLKWPGF-------------------VEFDDVNGKVLTYS-----AQDSIYKVFDLKNYTML 136 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~~~~~~~~~~-------------------v~Fs~pdG~~Las~-----s~D~tiklWdl~~g~~l 136 (389)
|++..|+. ..++. ....+... ++|+ |||+.++.. ..+..|.+||+.++++.
T Consensus 107 ~d~~~~~~---~~~~~-~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~s-pdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~ 181 (396)
T 3c5m_A 107 VDLETLEE---QVIYT-VDEEWKGYGTWVANSDCTKLVGIEILKRDWQ-PLTSWEKFAEFYHTNPTCRLIKVDIETGELE 181 (396)
T ss_dssp EETTTCCE---EEEEE-CCTTEEEEEEEEECTTSSEEEEEEEEGGGCC-CCCSHHHHHHHHHTCCCEEEEEEETTTCCEE
T ss_pred EECCCCCc---EEEEe-cccccCCCCCEEEeccCCccccccccccccC-CCCcceeeeeeccCCCcceEEEEECCCCcEE
Confidence 99887764 22332 11111111 2455 777777654 46779999999998865
Q ss_pred EEec-CCcEEEEEEcC--CceEEEEecCCCC---eeEEEEEcCCCeEEEEEeecC--CceeEEEEEecCCCeEEEEeCC-
Q 016446 137 YSIS-DKHVQEIKISP--GIMLLIFNRSSSH---VPLKILSIEDGTVLKVFYHLL--HRNKKVDFIEQFNEKLLVKQEN- 207 (389)
Q Consensus 137 ~tl~-~~~V~~vafS~--g~~la~~~~~s~d---~tiklWd~~tG~~l~tl~~~~--~~~~~v~f~~~~~~~l~~~s~D- 207 (389)
.... ...+..++||| |.+|+..+.+..+ ..|.+||+.+++.. .+..+. ..+..++|+ |++.+|+..+.+
T Consensus 182 ~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~s-pdg~~l~~~~~~~ 259 (396)
T 3c5m_A 182 VIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWI-PDGSAMAYVSYFK 259 (396)
T ss_dssp EEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEEC-TTSSCEEEEEEET
T ss_pred eeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEEC-CCCCEEEEEecCC
Confidence 4444 56799999997 6667776542221 57899998776543 333221 246778998 788888876533
Q ss_pred ----CcEEEEECCCCeEEEEcccCCCceEEEEEcC-CCcEEEEEc-----------------CCeEEEEeCC-CcEEEEe
Q 016446 208 ----ENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFR-----------------NRTVAVWNFR-GELVTSF 264 (389)
Q Consensus 208 ----~tIklWd~~tg~~~~~l~gh~~~v~sv~fsp-dg~~laS~s-----------------D~tIklWd~~-G~~l~tl 264 (389)
++|.+||+.+|+........ ... ++|+| ||++++.++ +..|.+||+. |++ +.|
T Consensus 260 ~~~~~~l~~~d~~~g~~~~l~~~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l 335 (396)
T 3c5m_A 260 GQTDRVIYKANPETLENEEVMVMP--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKL 335 (396)
T ss_dssp TTCCEEEEEECTTTCCEEEEEECC--SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEE
T ss_pred CCccceEEEEECCCCCeEEeeeCC--CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEc
Confidence 45999999999875543221 122 88999 999998753 3789999997 554 456
Q ss_pred ccCcCCc------CCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCe--EEEEeCCCCeE
Q 016446 265 EDHLLWH------PDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGS--INVSSILTGKC 318 (389)
Q Consensus 265 ~gh~~~~------~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~t--IklWd~~tg~~ 318 (389)
..|.... ....+..++|||||++|+..+.+ ++. |.+.|+.+++.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~----------~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 336 CKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDF----------EGVPAIYIADVPESYK 387 (396)
T ss_dssp EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT----------TSSCEEEEEECCTTCC
T ss_pred cCCCCccccccccccCCCCCceEccCCCeEEEEecC----------CCCceEEEEEEccccc
Confidence 6554310 00013578999999999988754 244 44555555554
No 177
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.86 E-value=3.9e-19 Score=188.96 Aligned_cols=257 Identities=13% Similarity=0.077 Sum_probs=188.4
Q ss_pred ceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCe
Q 016446 45 EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSI 124 (389)
Q Consensus 45 ~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~t 124 (389)
..+.+++|||||+.||.++..++.+ -.++++||+.+|+... .... . ..+.+++|| |||+.|+.++.|+.
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~-----~~~i~v~d~~tg~~~~--~~~~-~--~~~~~~~ws-pDg~~l~~~~~~~~ 193 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSD-----WVTIKFMKVDGAKELP--DVLE-R--VKFSCMAWT-HDGKGMFYNAYPQQ 193 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCS-----CEEEEEEETTTTEEEE--EEEE-E--ECSCCEEEC-TTSSEEEEEECCCC
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCc-----eEEEEEEECCCCCCCc--cccc-C--cccceEEEE-eCCCEEEEEEECCc
Confidence 4688999999999999887765443 1488999999887521 1111 1 113569998 99999999998877
Q ss_pred ----------------EEEEeCCCCe----EEEEec--CCcEEEEEEc-CCceEEEEecCCC--CeeEEEEEcCC-----
Q 016446 125 ----------------YKVFDLKNYT----MLYSIS--DKHVQEIKIS-PGIMLLIFNRSSS--HVPLKILSIED----- 174 (389)
Q Consensus 125 ----------------iklWdl~~g~----~l~tl~--~~~V~~vafS-~g~~la~~~~~s~--d~tiklWd~~t----- 174 (389)
|++|++.+++ +++... ...+.+++|| +|++|+.++..+. +..|.+||+.+
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 273 (710)
T 2xdw_A 194 DGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGI 273 (710)
T ss_dssp SSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSS
T ss_pred cccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccccc
Confidence 9999998876 334433 2458899999 6888887765333 57899999987
Q ss_pred -Ce-EEEEEeecCCceeEEEEEecCCCeEEEEeC----CCcEEEEECCCCe--EEEEcccCCC--ceEEEEEcCCCcEEE
Q 016446 175 -GT-VLKVFYHLLHRNKKVDFIEQFNEKLLVKQE----NENLQILDVRNAE--LMEVSRTEFM--TPSAFIFLYENQLFL 244 (389)
Q Consensus 175 -G~-~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~----D~tIklWd~~tg~--~~~~l~gh~~--~v~sv~fspdg~~la 244 (389)
|+ .++.+..+...+.. .|+ ++++.|+..+. +..|.+||+.+++ ..+.+..|.. .+..++|+|++++++
T Consensus 274 ~~~~~~~~l~~~~~~~~~-~~s-~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~ 351 (710)
T 2xdw_A 274 TGILKWVKLIDNFEGEYD-YVT-NEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVL 351 (710)
T ss_dssp CSSCCCEEEECSSSSCEE-EEE-EETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEE
T ss_pred CCccceEEeeCCCCcEEE-EEe-ccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEE
Confidence 64 56777766665554 355 67888887653 3479999999875 2344445544 788899999999999
Q ss_pred EEc-CCe--EEEEeC-CCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeE-E
Q 016446 245 TFR-NRT--VAVWNF-RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC-L 319 (389)
Q Consensus 245 S~s-D~t--IklWd~-~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~-l 319 (389)
+.. |+. |.+||+ +|++++.+..|... |.+++++|||+.|+-...+ ....++|.+||+.+|++ +
T Consensus 352 ~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~-----v~~~~~s~d~~~l~~~~ss-------~~~P~~i~~~d~~tg~~~~ 419 (710)
T 2xdw_A 352 CYLHDVKNTLQLHDLATGALLKIFPLEVGS-----VVGYSGQKKDTEIFYQFTS-------FLSPGIIYHCDLTKEELEP 419 (710)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEECCCSSE-----EEEEECCTTCSEEEEEEEC-------SSCCCEEEEEETTSSSCCC
T ss_pred EEEECCEEEEEEEECCCCCEEEecCCCCce-----EEEEecCCCCCEEEEEEeC-------CCCCCEEEEEECCCCccce
Confidence 998 885 556788 59988889877443 7899999999877644322 24568999999999985 5
Q ss_pred EEecCCC
Q 016446 320 AKINATN 326 (389)
Q Consensus 320 ~tl~gH~ 326 (389)
..|+.+.
T Consensus 420 ~~l~~~~ 426 (710)
T 2xdw_A 420 RVFREVT 426 (710)
T ss_dssp EEEEECC
T ss_pred EEeeecc
Confidence 5666544
No 178
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.86 E-value=1.4e-19 Score=174.62 Aligned_cols=237 Identities=10% Similarity=0.096 Sum_probs=183.3
Q ss_pred ccEEEEEee--ccEEEEEecC------------------------ceEEEEecccceeeeeeecCCcceEEEEEEeeCCC
Q 016446 4 TKVIEIVAA--RDIVFALAHS------------------------GVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNND 57 (389)
Q Consensus 4 ~~v~~i~~~--~~~~a~~~~~------------------------gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~ 57 (389)
..|..|.+. |+++++...+ ++|.+||.++|+.+..+...+......|+++|+|+
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 468889998 8888888777 47999999889998877655556789999999999
Q ss_pred EEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe--------eecccCceeEEEecC-CCeEEEEec-CCCeEEE
Q 016446 58 SLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE--------SESLKWPGFVEFDDV-NGKVLTYSA-QDSIYKV 127 (389)
Q Consensus 58 ~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~--------~~~~~~~~~v~Fs~p-dG~~Las~s-~D~tikl 127 (389)
.+++ ...+ +.|+.|+ ..|+..... .+. ...+..|..|+|+ | +|+++++.+ .++.|++
T Consensus 104 l~v~----d~~~------~~v~~~~-~~g~~~~~~-~~~~~~~~g~~~~~~~~P~~ia~~-~~~g~lyv~d~~~~~~I~~ 170 (329)
T 3fvz_A 104 YWVT----DVAL------HQVFKLD-PHSKEGPLL-ILGRSMQPGSDQNHFCQPTDVAVE-PSTGAVFVSDGYCNSRIVQ 170 (329)
T ss_dssp EEEE----ETTT------TEEEEEC-TTCSSCCSE-EESBTTBCCCSTTCCSSEEEEEEC-TTTCCEEEEECSSCCEEEE
T ss_pred EEEE----ECCC------CEEEEEe-CCCCeEEEE-EecccCCCCCCccccCCCcEEEEe-CCCCeEEEEeCCCCCeEEE
Confidence 7766 3445 6777888 455420011 111 2345578899998 7 899999987 6999999
Q ss_pred EeCCCCeEEEEec--C----------CcEEEEEEcC-CceEEEEecCCCCeeEEEEEcCCCeEEEEEe--ecCCceeEEE
Q 016446 128 FDLKNYTMLYSIS--D----------KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFY--HLLHRNKKVD 192 (389)
Q Consensus 128 Wdl~~g~~l~tl~--~----------~~V~~vafS~-g~~la~~~~~s~d~tiklWd~~tG~~l~tl~--~~~~~~~~v~ 192 (389)
|| .+|+.+.++. + .....|+|+| ++.|.++. ..+++|++||..+|+++.++. .+......++
T Consensus 171 ~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d--~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~ 247 (329)
T 3fvz_A 171 FS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVAD--RENGRIQCFKTDTKEFVREIKHASFGRNVFAIS 247 (329)
T ss_dssp EC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEE--TTTTEEEEEETTTCCEEEEECCTTTTTCEEEEE
T ss_pred Ec-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEE--CCCCEEEEEECCCCcEEEEEeccccCCCcceee
Confidence 99 5888887774 1 2489999995 36666664 445799999999999999995 3556678898
Q ss_pred EEecCCCeEEE-Ee-------CCCcEEEEECCCCeEEEEc---ccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCCCc
Q 016446 193 FIEQFNEKLLV-KQ-------ENENLQILDVRNAELMEVS---RTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGE 259 (389)
Q Consensus 193 f~~~~~~~l~~-~s-------~D~tIklWd~~tg~~~~~l---~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~G~ 259 (389)
|. | +.++. .+ .+.+|++||..+|+++.++ .+|...+..|+|+|||+++++.. +++|++|+++|+
T Consensus 248 ~~-p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 248 YI-P--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EE-T--TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred ec-C--CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 87 4 33333 22 4569999999999999997 47888999999999999999998 999999998753
No 179
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.86 E-value=9.2e-20 Score=193.49 Aligned_cols=285 Identities=11% Similarity=0.065 Sum_probs=200.8
Q ss_pred eccEEEEEecCc---eEEEEecc--cceeeeeee--c---CCcceEEEEEEeeCCCEEEEEEEee-cCCCcceeeeeeeE
Q 016446 12 ARDIVFALAHSG---VCAAFSRE--TNRRICFLN--V---SPDEVIRSLFYNKNNDSLITVSVYA-SDNFSSLKCRSTKI 80 (389)
Q Consensus 12 ~~~~~a~~~~~g---tiklW~~~--tg~~l~tl~--~---~~~~~v~sv~~spdg~~l~s~s~~~-~~d~~~l~~~~~~l 80 (389)
-|+.++-...++ .-.||-+. .|+.-.-+. . .|...+.+++|||||+.||.++..+ +++ .++++
T Consensus 78 dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~------~~i~v 151 (695)
T 2bkl_A 78 RNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADE------AVLHV 151 (695)
T ss_dssp ETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSC------CEEEE
T ss_pred ECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCce------EEEEE
Confidence 377777776655 46677653 343222222 1 2234799999999999999766544 445 78999
Q ss_pred eEeccCCCCCcceeEeeecccCc--eeEEEecCCCeEEEEecCCCe-------------EEEEeCCCCe----EEEEecC
Q 016446 81 EYIRRGKPDSGFALFESESLKWP--GFVEFDDVNGKVLTYSAQDSI-------------YKVFDLKNYT----MLYSISD 141 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~~~~~~~~--~~v~Fs~pdG~~Las~s~D~t-------------iklWdl~~g~----~l~tl~~ 141 (389)
||+.+|+.... ...... ..++|| |||+.|++++.|.+ |++|++.+++ +++....
T Consensus 152 ~dl~tg~~~~~------~~~~~~~~~~~~ws-pDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~ 224 (695)
T 2bkl_A 152 IDVDSGEWSKV------DVIEGGKYATPKWT-PDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTG 224 (695)
T ss_dssp EETTTCCBCSS------CCBSCCTTCCCEEC-TTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCC
T ss_pred EECCCCCCcCC------cccCcccccceEEe-cCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCC
Confidence 99999986200 111222 469998 99999999999887 9999998876 4444443
Q ss_pred --CcEEEEEEc-CCceEEEEecCC-CCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEe----CCCcEEEE
Q 016446 142 --KHVQEIKIS-PGIMLLIFNRSS-SHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ----ENENLQIL 213 (389)
Q Consensus 142 --~~V~~vafS-~g~~la~~~~~s-~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s----~D~tIklW 213 (389)
..+.+++|| ||++|++++..+ ....|.+|+..+|+ ++.|..+........+ ++++ ++..+ .+++|.+|
T Consensus 225 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~--~~g~-l~~~s~~~~~~~~l~~~ 300 (695)
T 2bkl_A 225 DPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA--WKDR-FYVLTDEGAPRQRVFEV 300 (695)
T ss_dssp CTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE--ETTE-EEEEECTTCTTCEEEEE
T ss_pred CCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEe--cCCc-EEEEECCCCCCCEEEEE
Confidence 479999999 688888876554 34578888877765 4556555566666655 4566 66654 36899999
Q ss_pred ECCCCeE---EEEcccC-CCceEEEEEcCCCcEEEEEc-CCeEEEEeC--CCcEEEEeccCcCCcCCCCeeEEEECCCCC
Q 016446 214 DVRNAEL---MEVSRTE-FMTPSAFIFLYENQLFLTFR-NRTVAVWNF--RGELVTSFEDHLLWHPDCNTNNIYITSDQD 286 (389)
Q Consensus 214 d~~tg~~---~~~l~gh-~~~v~sv~fspdg~~laS~s-D~tIklWd~--~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~ 286 (389)
|+.+++. ...+..+ ...+..++|+ +++++++.. |++.+||.+ +|++++.+..+... .|..++|+|||+
T Consensus 301 d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~----~v~~~~~s~d~~ 375 (695)
T 2bkl_A 301 DPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVG----AASNLMGLEDLD 375 (695)
T ss_dssp BTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSS----EECCCBSCTTCS
T ss_pred eCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCe----EEEEeecCCCCC
Confidence 9998864 4444444 5578889998 888999988 999999866 48888888765221 267899999998
Q ss_pred EEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCC
Q 016446 287 LIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATN 326 (389)
Q Consensus 287 ~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~ 326 (389)
.|+-...+ ...+++|++||+.+|+ ...|..+.
T Consensus 376 ~l~~~~ss-------~~~P~~v~~~d~~~g~-~~~l~~~~ 407 (695)
T 2bkl_A 376 DAYYVFTS-------FTTPRQIYKTSVSTGK-SELWAKVD 407 (695)
T ss_dssp EEEEEEEE-------TTEEEEEEEEETTTCC-EEEEEECC
T ss_pred EEEEEEcC-------CCCCCEEEEEECCCCc-EEEEecCC
Confidence 87743321 2456899999999888 45666654
No 180
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.86 E-value=5.6e-19 Score=164.98 Aligned_cols=236 Identities=12% Similarity=0.210 Sum_probs=176.0
Q ss_pred ceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEee-----ecccCceeEEEecCCCeEEEEe
Q 016446 45 EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFES-----ESLKWPGFVEFDDVNGKVLTYS 119 (389)
Q Consensus 45 ~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~-----~~~~~~~~v~Fs~pdG~~Las~ 119 (389)
....+|+++|+|+.+++ ...+ ..+.+|+.. |+. ...|.. .++..|..++|++++|+++++.
T Consensus 30 ~~p~~v~~~~~g~l~v~----~~~~------~~i~~~d~~-g~~---~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~ 95 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVA----DTNN------HRIQIFDKE-GRF---KFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTE 95 (286)
T ss_dssp SCEEEEEECTTCCEEEE----EGGG------TEEEEECTT-SCE---EEEECCBSSSTTCBSSEEEEEEETTTTEEEEEE
T ss_pred CCCceEEECCCCCEEEE----ECCC------CEEEEECCC-CcE---EEEecccCCCcccccCceEEEEEcCCCeEEEEc
Confidence 56899999999997766 3345 567778744 654 112211 1345678899955789988887
Q ss_pred cC-CCeEEEEeCCCCeEEEEec---CCcEEEEEEcC-CceEEEEecCCCCeeEEEEEcCCCeEEEEEe--ecCCceeEEE
Q 016446 120 AQ-DSIYKVFDLKNYTMLYSIS---DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFY--HLLHRNKKVD 192 (389)
Q Consensus 120 s~-D~tiklWdl~~g~~l~tl~---~~~V~~vafS~-g~~la~~~~~s~d~tiklWd~~tG~~l~tl~--~~~~~~~~v~ 192 (389)
.. ++.|++|| .+|+.+.++. ...+.+++|+| |.++ ++. ..++.|++||. +|+.+.++. .+......++
T Consensus 96 ~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~-v~~--~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~ 170 (286)
T 1q7f_A 96 RSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRII-VVE--CKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVV 170 (286)
T ss_dssp CGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEE-EEE--TTTTEEEEECT-TSCEEEEEECTTTCSSEEEEE
T ss_pred CCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEE-EEE--CCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEE
Confidence 54 89999999 6888887774 25799999994 6555 442 33478999995 688888885 3445678899
Q ss_pred EEecCCCeEEEEeCCCcEEEEECCCCeEEEEccc--CCCceEEEEEcCCCcEEEEEc-CC-eEEEEeCCCcEEEEeccCc
Q 016446 193 FIEQFNEKLLVKQENENLQILDVRNAELMEVSRT--EFMTPSAFIFLYENQLFLTFR-NR-TVAVWNFRGELVTSFEDHL 268 (389)
Q Consensus 193 f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~g--h~~~v~sv~fspdg~~laS~s-D~-tIklWd~~G~~l~tl~gh~ 268 (389)
+. +++..+++.+.++.|++||. +|+.+..+.. +...+..++|+|+|+++++.. ++ .|++||.+|+++.++..+.
T Consensus 171 ~~-~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~ 248 (286)
T 1q7f_A 171 VN-DKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKV 248 (286)
T ss_dssp EC-SSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESS
T ss_pred EC-CCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccC
Confidence 87 55555555568999999998 5677666644 347899999999999999997 76 9999999899999888765
Q ss_pred CCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCC
Q 016446 269 LWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTG 316 (389)
Q Consensus 269 ~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg 316 (389)
... .+.+++|+|||+++++ +. |++|++|++...
T Consensus 249 ~~~---~~~~i~~~~~g~l~vs-~~-----------~~~v~v~~~~~~ 281 (286)
T 1q7f_A 249 KHA---QCFDVALMDDGSVVLA-SK-----------DYRLYIYRYVQL 281 (286)
T ss_dssp CCS---CEEEEEEETTTEEEEE-ET-----------TTEEEEEECSCC
T ss_pred CCC---cceeEEECCCCcEEEE-CC-----------CCeEEEEEcccc
Confidence 421 2579999999998888 44 489999997643
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.84 E-value=4.4e-19 Score=168.98 Aligned_cols=271 Identities=11% Similarity=0.119 Sum_probs=181.3
Q ss_pred ceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCe
Q 016446 45 EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSI 124 (389)
Q Consensus 45 ~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~t 124 (389)
..|++++|+|++..+++. ..+ ..++.| .++. ...+ ......+..++|+ |||++++++..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~----~~~------~~~~~~---~~~~--~~~~--~~~~~~~~~~~~~-~~g~l~~~~~~~~~ 67 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPI----ISE------SELQTI---TAEP--WLEI--SKKGLQLEGLNFD-RQGQLFLLDVFEGN 67 (333)
T ss_dssp CCCCBCCSCGGGGCSSCC----CCG------GGSCEE---ECEE--EEEE--ESSCCCEEEEEEC-TTSCEEEEETTTCE
T ss_pred cccceeeecCCccceeEE----eec------ccCccc---ccce--eEEE--eccCccccCcEEC-CCCCEEEEECCCCE
Confidence 568899999999887764 233 233333 1221 0111 1233456789998 89999889999999
Q ss_pred EEEEeCCCCeEEEEe--cCCcEEEEEEc-CCceEEEEecC-CCCeeEEEEEcCCCeEEEEEe--ecCCceeEEEEEecCC
Q 016446 125 YKVFDLKNYTMLYSI--SDKHVQEIKIS-PGIMLLIFNRS-SSHVPLKILSIEDGTVLKVFY--HLLHRNKKVDFIEQFN 198 (389)
Q Consensus 125 iklWdl~~g~~l~tl--~~~~V~~vafS-~g~~la~~~~~-s~d~tiklWd~~tG~~l~tl~--~~~~~~~~v~f~~~~~ 198 (389)
|.+||+++++..... ....+.+++|+ +|.++++...+ ...+.|.+||..+++....+. .+...+..+++. |++
T Consensus 68 i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d-~~g 146 (333)
T 2dg1_A 68 IFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFD-SKG 146 (333)
T ss_dssp EEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEEC-TTS
T ss_pred EEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEEC-CCC
Confidence 999999888865443 35789999999 56655543211 011579999999887765554 233457888887 556
Q ss_pred CeEEEEeC------CCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcE-EEEEc-CCeEEEEeC--CCcEEEEe----
Q 016446 199 EKLLVKQE------NENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQL-FLTFR-NRTVAVWNF--RGELVTSF---- 264 (389)
Q Consensus 199 ~~l~~~s~------D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~-laS~s-D~tIklWd~--~G~~l~tl---- 264 (389)
..+++... .+.|..+|..+++..... .+...+..++|+|||+. +++.+ ++.|.+||+ +|+.+..+
T Consensus 147 ~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~ 225 (333)
T 2dg1_A 147 GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATI 225 (333)
T ss_dssp CEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEE
T ss_pred CEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceE
Confidence 55554443 245666666666655433 34456889999999984 45556 899999999 45544322
Q ss_pred ----ccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCC
Q 016446 265 ----EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSST 340 (389)
Q Consensus 265 ----~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~ 340 (389)
.++. .+..++|+|||+++++... ++.|.+||. +|+.+..+..+..
T Consensus 226 ~~~~~~~~------~~~~i~~d~~G~l~v~~~~-----------~~~v~~~d~-~g~~~~~~~~~~~------------- 274 (333)
T 2dg1_A 226 PYYFTGHE------GPDSCCIDSDDNLYVAMYG-----------QGRVLVFNK-RGYPIGQILIPGR------------- 274 (333)
T ss_dssp EEECCSSS------EEEEEEEBTTCCEEEEEET-----------TTEEEEECT-TSCEEEEEECTTG-------------
T ss_pred EEecCCCC------CCCceEECCCCCEEEEEcC-----------CCEEEEECC-CCCEEEEEEcCCC-------------
Confidence 2331 1578999999999988654 379999997 6888888765430
Q ss_pred CCccccccccceecccccccCCEEEEEECCCCCEEEEecCC
Q 016446 341 GKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRH 381 (389)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D 381 (389)
..+++..+.+++|+|||+.|+.++.+
T Consensus 275 ---------------~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 275 ---------------DEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp ---------------GGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred ---------------ccccccCcceEEECCCCCEEEEEeCc
Confidence 00111368899999999888766655
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.84 E-value=5.6e-19 Score=187.72 Aligned_cols=275 Identities=11% Similarity=0.053 Sum_probs=190.8
Q ss_pred eeCCCEEEEEEEeecCCCcceeeeeeeEeEe--ccCCCCCcceeEeee-----cccCceeEEEecCCCeEEEEecCCC--
Q 016446 53 NKNNDSLITVSVYASDNFSSLKCRSTKIEYI--RRGKPDSGFALFESE-----SLKWPGFVEFDDVNGKVLTYSAQDS-- 123 (389)
Q Consensus 53 spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i--~~g~~~~~~~l~~~~-----~~~~~~~v~Fs~pdG~~Las~s~D~-- 123 (389)
+|||+.++.....++.. .-.||-+ ..|+. ..++... +...+.+++|| |||++||.++.++
T Consensus 80 ~~dG~~~~~~~~~~~~~-------~~~l~~~~~~~~~~---~~lld~~~l~~~~~~~~~~~~~S-PDg~~la~~~~~~G~ 148 (710)
T 2xdw_A 80 FKKGKRYFYFYNTGLQN-------QRVLYVQDSLEGEA---RVFLDPNILSDDGTVALRGYAFS-EDGEYFAYGLSASGS 148 (710)
T ss_dssp EEETTEEEEEEECSSCS-------SCEEEEESSTTSCC---EEEECGGGGCTTSCEEEEEEEEC-TTSSEEEEEEEETTC
T ss_pred EEECCEEEEEEEcCCce-------EEEEEEEcCCCCCc---EEEECHHHhccCCCEEEEEEEEC-CCCCEEEEEEcCCCC
Confidence 39999998866543221 1123333 23332 2232211 11124568998 9999999876544
Q ss_pred ---eEEEEeCCCCeEEE-EecCCcEEEEEEc-CCceEEEEecCCC-------------CeeEEEEEcCCCe----EEEEE
Q 016446 124 ---IYKVFDLKNYTMLY-SISDKHVQEIKIS-PGIMLLIFNRSSS-------------HVPLKILSIEDGT----VLKVF 181 (389)
Q Consensus 124 ---tiklWdl~~g~~l~-tl~~~~V~~vafS-~g~~la~~~~~s~-------------d~tiklWd~~tG~----~l~tl 181 (389)
+|++||+.+|+.+. ++....+.+++|| ||+.|+.++.+.. ...|++|++.+++ ++.+.
T Consensus 149 ~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~ 228 (710)
T 2xdw_A 149 DWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEF 228 (710)
T ss_dssp SCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECC
T ss_pred ceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEecc
Confidence 99999999999765 3433346789999 6889988765533 2349999999987 32232
Q ss_pred eecCCceeEEEEEecCCCeEEEEeC-----CCcEEEEECCC------Ce-EEEEcccCCCceEEEEEcCCCcEEEEEc--
Q 016446 182 YHLLHRNKKVDFIEQFNEKLLVKQE-----NENLQILDVRN------AE-LMEVSRTEFMTPSAFIFLYENQLFLTFR-- 247 (389)
Q Consensus 182 ~~~~~~~~~v~f~~~~~~~l~~~s~-----D~tIklWd~~t------g~-~~~~l~gh~~~v~sv~fspdg~~laS~s-- 247 (389)
..|......+.|+ |++.+|+..+. +..|.+||+.+ ++ ..+.+..|...+... |+|||+.|+..+
T Consensus 229 ~~~~~~~~~~~~S-pDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~ 306 (710)
T 2xdw_A 229 PDEPKWMGGAELS-DDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDY-VTNEGTVFTFKTNR 306 (710)
T ss_dssp TTCTTCEEEEEEC-TTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEE-EEEETTEEEEEECT
T ss_pred CCCCeEEEEEEEc-CCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEE-EeccCCEEEEEECC
Confidence 2234446788997 78888888653 67899999987 64 466677777777664 888888776554
Q ss_pred C---CeEEEEeCC-Cc--EEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCC--eEEEEeCCCCeEE
Q 016446 248 N---RTVAVWNFR-GE--LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAG--SINVSSILTGKCL 319 (389)
Q Consensus 248 D---~tIklWd~~-G~--~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~--tIklWd~~tg~~l 319 (389)
+ ..|.+||+. ++ ..++|..|... ..+.+++|+|++++++++..| + .|++||+.+|+++
T Consensus 307 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~lv~~~~~~-----------g~~~l~~~~~~~g~~~ 372 (710)
T 2xdw_A 307 HSPNYRLINIDFTDPEESKWKVLVPEHEK---DVLEWVACVRSNFLVLCYLHD-----------VKNTLQLHDLATGALL 372 (710)
T ss_dssp TCTTCEEEEEETTSCCGGGCEEEECCCSS---CEEEEEEEETTTEEEEEEEET-----------TEEEEEEEETTTCCEE
T ss_pred CCCCCEEEEEeCCCCCcccceeccCCCCC---CeEEEEEEEcCCEEEEEEEEC-----------CEEEEEEEECCCCCEE
Confidence 3 369999996 54 34566666542 127889999999999998765 5 4677888789999
Q ss_pred EEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEE----EecCCCcEEEcc
Q 016446 320 AKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIY----TGNRHGLVHVWS 388 (389)
Q Consensus 320 ~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~La----Sgs~D~tIrlW~ 388 (389)
+.|..|. ..|.+++++||++.|+ |....++|.+||
T Consensus 373 ~~l~~~~----------------------------------~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d 411 (710)
T 2xdw_A 373 KIFPLEV----------------------------------GSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCD 411 (710)
T ss_dssp EEECCCS----------------------------------SEEEEEECCTTCSEEEEEEECSSCCCEEEEEE
T ss_pred EecCCCC----------------------------------ceEEEEecCCCCCEEEEEEeCCCCCCEEEEEE
Confidence 9998875 4788999999998776 333457888886
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.84 E-value=1.3e-18 Score=163.83 Aligned_cols=227 Identities=11% Similarity=0.088 Sum_probs=166.4
Q ss_pred cccCceeEEEecCCCe-EEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCe
Q 016446 99 SLKWPGFVEFDDVNGK-VLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGT 176 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~-~Las~s~D~tiklWdl~~g~~l~tl~~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~ 176 (389)
....+.+++|+ |+|+ +++++..++.|..||..++...+..+...+.+++|+ +|.++++. ..++.|.+||..+|+
T Consensus 26 ~~~~~eg~~~d-~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~---~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 26 GFTWTEGPVYV-PARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACS---HGLRRLERQREPGGE 101 (296)
T ss_dssp CCSSEEEEEEE-GGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEE---TTTTEEEEECSTTCC
T ss_pred CCccccCCeEe-CCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEe---cCCCeEEEEcCCCCc
Confidence 34456789998 8998 888899999999999987722223345679999999 46655443 334689999998998
Q ss_pred EEEEEeecC----CceeEEEEEecCCCeEEEEeC-----------------CCcEEEEECCCCeEEEEcccCCCceEEEE
Q 016446 177 VLKVFYHLL----HRNKKVDFIEQFNEKLLVKQE-----------------NENLQILDVRNAELMEVSRTEFMTPSAFI 235 (389)
Q Consensus 177 ~l~tl~~~~----~~~~~v~f~~~~~~~l~~~s~-----------------D~tIklWd~~tg~~~~~l~gh~~~v~sv~ 235 (389)
....+.... .....+++. |++..+++.+. .+.|..+|.. |+. ..+..+...+..++
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d-~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~gi~ 178 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLA-PDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRVKPNGLA 178 (296)
T ss_dssp EEEEECEETTEECCCCCCEEEC-TTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCSSEEEEE
T ss_pred EEEEeeccCCCCCCCCCCEEEC-CCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCCCCccEE
Confidence 765543221 234678887 56665555221 2345555554 554 44556777889999
Q ss_pred EcCCCcEEEEEc-CCeEEEEeCC--CcE---EEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEE
Q 016446 236 FLYENQLFLTFR-NRTVAVWNFR--GEL---VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSIN 309 (389)
Q Consensus 236 fspdg~~laS~s-D~tIklWd~~--G~~---l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIk 309 (389)
|+|||++|++.+ ++.|.+|+++ |++ .+.+..+... +..++|+|||+++++. + +.|.
T Consensus 179 ~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~-----p~~i~~d~~G~l~v~~--~-----------~~v~ 240 (296)
T 3e5z_A 179 FLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGK-----TDGLRVDAGGLIWASA--G-----------DGVH 240 (296)
T ss_dssp ECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSC-----CCSEEEBTTSCEEEEE--T-----------TEEE
T ss_pred ECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCC-----CCeEEECCCCCEEEEc--C-----------CeEE
Confidence 999999997777 8999999984 766 4555323222 4789999999988876 3 7999
Q ss_pred EEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEE-CCCCCEEEEecCCCcEEE
Q 016446 310 VSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFY-DEERNEIYTGNRHGLVHV 386 (389)
Q Consensus 310 lWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svaf-Spdg~~LaSgs~D~tIrl 386 (389)
+||.. |+++..+..+. . +.+++| +|||+.|+.++.++.+|+
T Consensus 241 ~~~~~-g~~~~~~~~~~----------------------------------~-~~~~~f~~~d~~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 241 VLTPD-GDELGRVLTPQ----------------------------------T-TSNLCFGGPEGRTLYMTVSTEFWSI 282 (296)
T ss_dssp EECTT-SCEEEEEECSS----------------------------------C-CCEEEEESTTSCEEEEEETTEEEEE
T ss_pred EECCC-CCEEEEEECCC----------------------------------C-ceeEEEECCCCCEEEEEcCCeEEEE
Confidence 99965 99999998776 4 889999 699999999999877665
No 184
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.83 E-value=6.7e-18 Score=180.66 Aligned_cols=285 Identities=12% Similarity=0.058 Sum_probs=197.5
Q ss_pred ccEEEEEecCce---EEEEeccc----ceeeee------eecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeee
Q 016446 13 RDIVFALAHSGV---CAAFSRET----NRRICF------LNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 79 (389)
Q Consensus 13 ~~~~a~~~~~gt---iklW~~~t----g~~l~t------l~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~ 79 (389)
|+.++-...++. -.||-+.. |..... +...+...+.+++|||||+.||.++..++.+ -.+++
T Consensus 118 G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e-----~~~i~ 192 (741)
T 1yr2_A 118 GASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSD-----WRTVK 192 (741)
T ss_dssp TTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCS-----EEEEE
T ss_pred CCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCc-----eEEEE
Confidence 777776665554 67787642 222222 2222224788999999999999988775554 25789
Q ss_pred EeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCe--------------EEEEeCCCCe----EEEEecC
Q 016446 80 IEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSI--------------YKVFDLKNYT----MLYSISD 141 (389)
Q Consensus 80 l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~t--------------iklWdl~~g~----~l~tl~~ 141 (389)
+||+.+|+.. ...... .....++|| || +.|+.++.|++ |++|++.+++ +++....
T Consensus 193 v~dl~tg~~~---~~~~~~--~~~~~~~ws-pD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~ 265 (741)
T 1yr2_A 193 FVGVADGKPL---ADELKW--VKFSGLAWL-GN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPE 265 (741)
T ss_dssp EEETTTCCEE---EEEEEE--EESCCCEES-TT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTT
T ss_pred EEECCCCCCC---CccCCC--ceeccEEEE-CC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCC
Confidence 9999999862 111001 112368998 89 99999887765 9999998776 3344333
Q ss_pred --CcEEEEEEc-CCceEEEEecCC--CCeeEEEEEcCCC--eEEEEEeecCCceeEEEEEecCCCeEEEEeC----CCcE
Q 016446 142 --KHVQEIKIS-PGIMLLIFNRSS--SHVPLKILSIEDG--TVLKVFYHLLHRNKKVDFIEQFNEKLLVKQE----NENL 210 (389)
Q Consensus 142 --~~V~~vafS-~g~~la~~~~~s--~d~tiklWd~~tG--~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~----D~tI 210 (389)
..+.+++|| ||++|+..+... ....|++||+.+| ++++.|..+........+ ++++.|+..+. +..|
T Consensus 266 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~--~dg~~l~~~s~~~~~~~~l 343 (741)
T 1yr2_A 266 LPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVD--GVGDQLWFVSGDGAPLKKI 343 (741)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEE--EETTEEEEEECTTCTTCEE
T ss_pred CCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEe--ccCCEEEEEECCCCCCCEE
Confidence 268999999 688888776544 3468999999988 436677655555544433 77888888764 4569
Q ss_pred EEEECCCC--eEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeC--CCcEEEEeccCcCCcCCCCeeEEEECCCC
Q 016446 211 QILDVRNA--ELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNF--RGELVTSFEDHLLWHPDCNTNNIYITSDQ 285 (389)
Q Consensus 211 klWd~~tg--~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~--~G~~l~tl~gh~~~~~~~~v~sv~fSpdG 285 (389)
.+||+.++ +....+.++...+..++|+ +++++++.. |+..+||.+ +|++++.+..+.. ..|..++++|||
T Consensus 344 ~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~----~~v~~~~~s~d~ 418 (741)
T 1yr2_A 344 VRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGI----GSASGLSGRPGD 418 (741)
T ss_dssp EEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSS----CEEEEEECCBTC
T ss_pred EEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCC----eEEEEeecCCCC
Confidence 99999884 5666666777778888888 778888888 998888865 5888888875322 127899999999
Q ss_pred CEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecC
Q 016446 286 DLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 324 (389)
Q Consensus 286 ~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~g 324 (389)
+.|+-...+ ....++|.+||+.+|+ ...|+.
T Consensus 419 ~~l~~~~ss-------~~~P~~i~~~d~~tg~-~~~l~~ 449 (741)
T 1yr2_A 419 RHAYLSFSS-------FTQPATVLALDPATAK-TTPWEP 449 (741)
T ss_dssp SCEEEEEEE-------TTEEEEEEEEETTTTE-EEECSC
T ss_pred CEEEEEEcC-------CCCCCEEEEEECCCCc-EEEEec
Confidence 866633221 2356899999999888 456654
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.82 E-value=3.9e-19 Score=188.64 Aligned_cols=276 Identities=10% Similarity=0.043 Sum_probs=187.5
Q ss_pred EEeeCCCEEEEEEEeecCCCcceeeeeeeEeEe--ccCCCCCcceeEeee-----cccCceeEEEecCCCeEEE-----E
Q 016446 51 FYNKNNDSLITVSVYASDNFSSLKCRSTKIEYI--RRGKPDSGFALFESE-----SLKWPGFVEFDDVNGKVLT-----Y 118 (389)
Q Consensus 51 ~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i--~~g~~~~~~~l~~~~-----~~~~~~~v~Fs~pdG~~La-----s 118 (389)
..+|||+.++.....++.. ...||-. ..|+. ..|+... +...+.+++|| |||++|| +
T Consensus 74 ~p~~dG~~~~~~~~~~~~~-------~~~l~~~~~~~~~~---~~l~d~~~~a~~~~~~~~~~~~S-PDG~~la~~~~~~ 142 (695)
T 2bkl_A 74 TPSRRNGRFFYVRTHKDKE-------KAILYWRQGESGQE---KVLLDPNGWSKDGTVSLGTWAVS-WDGKKVAFAQKPN 142 (695)
T ss_dssp CCEEETTEEEEEEECTTCS-------SCEEEEEESTTSCC---EEEECGGGSSSSSCEEEEEEEEC-TTSSEEEEEEEET
T ss_pred CCEEECCEEEEEEEcCCCe-------EEEEEEEcCCCCCc---EEEEchHHhccCCCEEEEEEEEC-CCCCEEEEEECCC
Confidence 3459999999877654322 2233433 23332 2233211 11234578998 9999999 6
Q ss_pred ecCCCeEEEEeCCCCeEE-E-EecCCcEEEEEEc-CCceEEEEecCCC----------CeeEEEEEcCCCe----EEEEE
Q 016446 119 SAQDSIYKVFDLKNYTML-Y-SISDKHVQEIKIS-PGIMLLIFNRSSS----------HVPLKILSIEDGT----VLKVF 181 (389)
Q Consensus 119 ~s~D~tiklWdl~~g~~l-~-tl~~~~V~~vafS-~g~~la~~~~~s~----------d~tiklWd~~tG~----~l~tl 181 (389)
|+.+.+|++||+++|+.+ . .+......+++|| ||+.|+.++.+.. ...|++|++.+++ ++...
T Consensus 143 G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~ 222 (695)
T 2bkl_A 143 AADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHER 222 (695)
T ss_dssp TCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECC
T ss_pred CCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEec
Confidence 677889999999999865 2 1222222689999 6888888765432 2349999999987 44444
Q ss_pred eecCCceeEEEEEecCCCeEEEEeCCC----cEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc----CCeEEE
Q 016446 182 YHLLHRNKKVDFIEQFNEKLLVKQENE----NLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR----NRTVAV 253 (389)
Q Consensus 182 ~~~~~~~~~v~f~~~~~~~l~~~s~D~----tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s----D~tIkl 253 (389)
..|...+..+.|+ |++.+|++.+.++ .|.+||..+++.. .+..+...+...++ |+|++++++. ++.|.+
T Consensus 223 ~~~~~~~~~~~~S-pDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~ 299 (695)
T 2bkl_A 223 TGDPTTFLQSDLS-RDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFE 299 (695)
T ss_dssp CCCTTCEEEEEEC-TTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEE
T ss_pred CCCCEEEEEEEEC-CCCCEEEEEEeCCCCceEEEEEcCCCCceE-EeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEE
Confidence 4454567899998 7889998877555 6777777667644 44556667777777 5555666554 479999
Q ss_pred EeCC-CcE--EEEeccCc-CCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCC-CCeEEEEecCCCCC
Q 016446 254 WNFR-GEL--VTSFEDHL-LWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL-TGKCLAKINATNCS 328 (389)
Q Consensus 254 Wd~~-G~~--l~tl~gh~-~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~-tg~~l~tl~gH~~~ 328 (389)
||++ ++. .+.+..|. .. .|.+++|+ ++++++++..| ++.+||.+. +|++++.+..+..
T Consensus 300 ~d~~~~~~~~~~~l~~~~~~~----~l~~~~~~-~~~lv~~~~~d-----------g~~~l~~~~~~g~~~~~l~~~~~- 362 (695)
T 2bkl_A 300 VDPAKPARASWKEIVPEDSSA----SLLSVSIV-GGHLSLEYLKD-----------ATSEVRVATLKGKPVRTVQLPGV- 362 (695)
T ss_dssp EBTTBCSGGGCEEEECCCSSC----EEEEEEEE-TTEEEEEEEET-----------TEEEEEEEETTCCEEEECCCSSS-
T ss_pred EeCCCCCccCCeEEecCCCCC----eEEEEEEE-CCEEEEEEEEC-----------CEEEEEEEeCCCCeeEEecCCCC-
Confidence 9996 653 34444443 22 27889998 78888988765 888888654 5888888876631
Q ss_pred CCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEE----EecCCCcEEEccC
Q 016446 329 PKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIY----TGNRHGLVHVWSN 389 (389)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~La----Sgs~D~tIrlW~~ 389 (389)
..|.+++++|||+.|+ |...+++|.+||.
T Consensus 363 --------------------------------~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~ 395 (695)
T 2bkl_A 363 --------------------------------GAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSV 395 (695)
T ss_dssp --------------------------------SEECCCBSCTTCSEEEEEEEETTEEEEEEEEET
T ss_pred --------------------------------eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 3677889999999888 6666788999873
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.82 E-value=2e-17 Score=157.52 Aligned_cols=269 Identities=9% Similarity=0.050 Sum_probs=187.8
Q ss_pred ccccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeee
Q 016446 2 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 79 (389)
Q Consensus 2 ~~~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~ 79 (389)
....|..+.|+ ...++..+.+++++.| .++.+..+..+. ..+.+++|+|+|+.+++ +..+ ..+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~g~l~~~----~~~~------~~i~ 69 (333)
T 2dg1_A 4 SQQDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKG-LQLEGLNFDRQGQLFLL----DVFE------GNIF 69 (333)
T ss_dssp --CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSC-CCEEEEEECTTSCEEEE----ETTT------CEEE
T ss_pred cccccceeeecCCccceeEEeecccCccc---ccceeEEEeccC-ccccCcEECCCCCEEEE----ECCC------CEEE
Confidence 34566777777 5566777889999999 477888888765 67899999999996666 4456 6788
Q ss_pred EeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCC----CeEEEEeCCCCeEEEEec----CCcEEEEEEcC
Q 016446 80 IEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD----SIYKVFDLKNYTMLYSIS----DKHVQEIKISP 151 (389)
Q Consensus 80 l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D----~tiklWdl~~g~~l~tl~----~~~V~~vafS~ 151 (389)
+|+...|++ ..++ ......|.+++|+ |||+++++...+ +.|.+||.++++....+. ...+.+++|+|
T Consensus 70 ~~d~~~~~~---~~~~-~~~~~~~~~i~~~-~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~ 144 (333)
T 2dg1_A 70 KINPETKEI---KRPF-VSHKANPAAIKIH-KDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDS 144 (333)
T ss_dssp EECTTTCCE---EEEE-ECSSSSEEEEEEC-TTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECT
T ss_pred EEeCCCCcE---EEEe-eCCCCCcceEEEC-CCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECC
Confidence 888777764 2222 1233557889998 899999887776 799999998877653332 35799999995
Q ss_pred -CceEEEEecC---CCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEE-eCCCcEEEEECCC-CeEEE---
Q 016446 152 -GIMLLIFNRS---SSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRN-AELME--- 222 (389)
Q Consensus 152 -g~~la~~~~~---s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~-s~D~tIklWd~~t-g~~~~--- 222 (389)
|.++++...+ .....|..+|..+++...... +......++|+ |++..+..+ +.++.|.+||+.+ |+.+.
T Consensus 145 ~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~i~~~-~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~ 222 (333)
T 2dg1_A 145 KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ-NISVANGIALS-TDEKVLWVTETTANRLHRIALEDDGVTIQPFG 222 (333)
T ss_dssp TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE-EESSEEEEEEC-TTSSEEEEEEGGGTEEEEEEECTTSSSEEEEE
T ss_pred CCCEEEEeccccccCCCceEEEEeCCCCEEEEeec-CCCcccceEEC-CCCCEEEEEeCCCCeEEEEEecCCCcCccccc
Confidence 6555443211 012456666666666544333 33556888887 667766554 5789999999964 44322
Q ss_pred -----EcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCCCcEEEEeccCcCC--cCCCCeeEEEECCCCCEEEEEec
Q 016446 223 -----VSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLW--HPDCNTNNIYITSDQDLIISYCK 293 (389)
Q Consensus 223 -----~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~G~~l~tl~gh~~~--~~~~~v~sv~fSpdG~~laS~s~ 293 (389)
.+.++ ..+..++++|+|+++++.. ++.|.+||.+|+.+.++..+... +. ..+.+++|+|||+.|..++.
T Consensus 223 ~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~-~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 223 ATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHM-LRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp EEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEECTTGGGTCS-CBCCEEEECTTSCEEEEEEE
T ss_pred ceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEEEcCCCccccc-cCcceEEECCCCCEEEEEeC
Confidence 12333 4788999999999999887 89999999999888887644320 00 01589999999987765554
No 187
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.81 E-value=2e-17 Score=157.70 Aligned_cols=214 Identities=10% Similarity=0.061 Sum_probs=170.7
Q ss_pred CeEEEEecCCCeEEEEeCCCCeEEEEecC---CcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeec-CCc
Q 016446 113 GKVLTYSAQDSIYKVFDLKNYTMLYSISD---KHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHL-LHR 187 (389)
Q Consensus 113 G~~Las~s~D~tiklWdl~~g~~l~tl~~---~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~-~~~ 187 (389)
|++|++++.|+.|++||.++|+.+.++.. ..+.+++++ +|++|+ + .+..|+.||. +|+.+.++..+ ...
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s----~~~~V~~~d~-~G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-S----YSKGAKMITR-DGRELWNIAAPAGCE 78 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-E----CBSEEEEECT-TSCEEEEEECCTTCE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-e----CCCCEEEECC-CCCEEEEEcCCCCcc
Confidence 78999999999999999999999988873 368999999 466665 3 1368999998 89999999854 246
Q ss_pred eeEEEEEecCCCeEEEEeC-CCcEEEEECCCCeEEEEcc------cCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCCCc
Q 016446 188 NKKVDFIEQFNEKLLVKQE-NENLQILDVRNAELMEVSR------TEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGE 259 (389)
Q Consensus 188 ~~~v~f~~~~~~~l~~~s~-D~tIklWd~~tg~~~~~l~------gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~G~ 259 (389)
+.++.++ +++..+++.+. ++.|..+|. +|+.+..+. ++...+..+++.|+|+++++.. ++.|..||.+|+
T Consensus 79 ~~~~~~~-~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~ 156 (276)
T 3no2_A 79 MQTARIL-PDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQ 156 (276)
T ss_dssp EEEEEEC-TTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSC
T ss_pred ccccEEC-CCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCC
Confidence 6788887 67788887776 788888886 788766653 3334567788999999999998 999999999999
Q ss_pred EEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCC
Q 016446 260 LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSS 339 (389)
Q Consensus 260 ~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~ 339 (389)
.+.++..+.. ..++.+.|+|++|++++. ++.|..+|..||+.+.++..+...
T Consensus 157 ~~w~~~~~~~------~~~~~~~~~g~~~v~~~~-----------~~~v~~~d~~tG~~~w~~~~~~~~----------- 208 (276)
T 3no2_A 157 LLNSVKLSGT------PFSSAFLDNGDCLVACGD-----------AHCFVQLNLESNRIVRRVNANDIE----------- 208 (276)
T ss_dssp EEEEEECSSC------CCEEEECTTSCEEEECBT-----------TSEEEEECTTTCCEEEEEEGGGSB-----------
T ss_pred EEEEEECCCC------ccceeEcCCCCEEEEeCC-----------CCeEEEEeCcCCcEEEEecCCCCC-----------
Confidence 9999987543 368899999999998654 378999999999999999755310
Q ss_pred CCCccccccccceecccccccCCEEEEEECCCCCEEEEec
Q 016446 340 TGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGN 379 (389)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs 379 (389)
+..+..+.+++..|+|+++++.+
T Consensus 209 -----------------~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 209 -----------------GVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp -----------------SCCCSEEEEEEECTTSCEEEEEE
T ss_pred -----------------CccccccccceEcCCCCEEEEec
Confidence 00124678888889998888873
No 188
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.81 E-value=2.1e-16 Score=166.04 Aligned_cols=320 Identities=12% Similarity=0.073 Sum_probs=221.4
Q ss_pred ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEec--cCCCCC
Q 016446 13 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIR--RGKPDS 90 (389)
Q Consensus 13 ~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~--~g~~~~ 90 (389)
+..+++...+++|.++|.+|++.+.++..+ ..+..++|||||++|..++ .| ..+.++|+. +++.
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g--~~p~~v~~SpDGr~lyv~~----~d------g~V~viD~~~~t~~~-- 232 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTG--YAVHISRLSASGRYLFVIG----RD------GKVNMIDLWMKEPTT-- 232 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECS--SCEEEEEECTTSCEEEEEE----TT------SEEEEEETTSSSCCE--
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCC--CCccceEECCCCCEEEEEc----CC------CeEEEEECCCCCCcE--
Confidence 467778888999999999999999999865 4678999999999988753 45 578888885 6654
Q ss_pred cceeEeeecccCceeEEEec---CCCeEEEEec-CCCeEEEEeCCCCeEEEEecC------------C-cEEEEEEc-CC
Q 016446 91 GFALFESESLKWPGFVEFDD---VNGKVLTYSA-QDSIYKVFDLKNYTMLYSISD------------K-HVQEIKIS-PG 152 (389)
Q Consensus 91 ~~~l~~~~~~~~~~~v~Fs~---pdG~~Las~s-~D~tiklWdl~~g~~l~tl~~------------~-~V~~vafS-~g 152 (389)
+.....-..|..++||+ |||++|..+. .+++|.++|..+.+++.++.. . .|.++.+| ++
T Consensus 233 ---v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~ 309 (567)
T 1qks_A 233 ---VAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYR 309 (567)
T ss_dssp ---EEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSS
T ss_pred ---eEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCC
Confidence 22222333467899985 6998877665 469999999999999877641 1 68899999 45
Q ss_pred ceEEEEecCCCCeeEEEEEcCCCeEEEEEe-ecCCceeEEEEEecCCCeEEEEe-CCCcEEEEECCCCeEEEEccc----
Q 016446 153 IMLLIFNRSSSHVPLKILSIEDGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAELMEVSRT---- 226 (389)
Q Consensus 153 ~~la~~~~~s~d~tiklWd~~tG~~l~tl~-~~~~~~~~v~f~~~~~~~l~~~s-~D~tIklWd~~tg~~~~~l~g---- 226 (389)
..++... ...++|.++|..+.+.+..-. ........+.|. |++.+++++. .+++|.++|.++++++..+.-
T Consensus 310 ~~~vv~~--~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~-pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~ 386 (567)
T 1qks_A 310 PEFIVNV--KETGKILLVDYTDLNNLKTTEISAERFLHDGGLD-GSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQT 386 (567)
T ss_dssp SEEEEEE--TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEEC-TTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSS
T ss_pred CEEEEEe--cCCCeEEEEecCCCccceeeeeeccccccCceEC-CCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcC
Confidence 5555543 445799999988765444332 223445677887 7888887765 789999999999998776543
Q ss_pred -CCCceEEEEEcCC-CcEEEEEc--CCeEEEEeCC--------CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecC
Q 016446 227 -EFMTPSAFIFLYE-NQLFLTFR--NRTVAVWNFR--------GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKA 294 (389)
Q Consensus 227 -h~~~v~sv~fspd-g~~laS~s--D~tIklWd~~--------G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D 294 (389)
|...--.+ |.|+ |.+.+++. +++|-++|.+ .+.++++...... -..|.++|||++|-....-
T Consensus 387 Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g-----~~~i~~~p~~~~l~v~~~~ 460 (567)
T 1qks_A 387 PHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGG-----SLFIKTHPNSQYLYVDATL 460 (567)
T ss_dssp BCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC-----CCCEECCTTCSEEEEECTT
T ss_pred CCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCC-----CEEEEeCCCCCeEEEecCC
Confidence 43222223 6887 67777774 7999999985 3578888764322 1357889999999875431
Q ss_pred CCcccccCCCCCeEEEEeCCCC------eEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEE
Q 016446 295 EPEDQWMEGSAGSINVSSILTG------KCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFY 368 (389)
Q Consensus 295 ~~~~~~~~s~D~tIklWd~~tg------~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svaf 368 (389)
+++.. -.++|-++|+.+. ++...+.--+ |+.+++.-..+..+.|
T Consensus 461 ~~~~~----~~~~v~v~d~~~~~~~g~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~ 510 (567)
T 1qks_A 461 NPEAE----ISGSVAVFDIKAMTGDGSDPEFKTLPIAE--------------------------WAGITEGQPRVVQGEF 510 (567)
T ss_dssp CSSHH----HHTCEEEEEGGGCCCSSSCCCEEEECHHH--------------------------HHTCCSSCCEEEEEEE
T ss_pred CCCcc----cCceEEEEECCcccccccCCCcEEecccc--------------------------ccccCCCCcceEeeeE
Confidence 10000 0259999998865 1223332000 1111111258899999
Q ss_pred CCCCCEEEEec-----CCCcEEEcc
Q 016446 369 DEERNEIYTGN-----RHGLVHVWS 388 (389)
Q Consensus 369 Spdg~~LaSgs-----~D~tIrlW~ 388 (389)
+|||+.|.-+. .++.|-+.|
T Consensus 511 ~~~G~~~~~s~~~~~~~~~~i~v~D 535 (567)
T 1qks_A 511 NKDGTEVWFSVWNGKDQESALVVVD 535 (567)
T ss_dssp CTTSSEEEEEEECCTTSCCEEEEEE
T ss_pred CCCCCEEEEEeecCCCCCCcEEEEE
Confidence 99999877663 367887765
No 189
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.79 E-value=1.9e-16 Score=153.17 Aligned_cols=269 Identities=10% Similarity=0.043 Sum_probs=189.3
Q ss_pred cCceEEEEecccceeeeeee----cC-CcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeE
Q 016446 21 HSGVCAAFSRETNRRICFLN----VS-PDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALF 95 (389)
Q Consensus 21 ~~gtiklW~~~tg~~l~tl~----~~-~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~ 95 (389)
.+++|.++|.+||+..+++. +. -....+.+++. +++..++ . ..+ ..+.++|..++++ +.
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~-~---~~~------~~v~viD~~t~~~-----~~ 78 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIV-V---NNS------HVIFAIDINTFKE-----VG 78 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEE-E---GGG------TEEEEEETTTCCE-----EE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEE-E---cCC------CEEEEEECcccEE-----EE
Confidence 37999999999999887652 11 11356788873 3443333 2 234 5788899888886 22
Q ss_pred eeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec-CC------cEEEEEEcCCceEEEEecCCCCeeEE
Q 016446 96 ESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DK------HVQEIKISPGIMLLIFNRSSSHVPLK 168 (389)
Q Consensus 96 ~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~-~~------~V~~vafS~g~~la~~~~~s~d~tik 168 (389)
+......|..++|+ |||++.++...+++|.+||+++++.+.++. +. ....+++ ++++|.++.. +.+++|.
T Consensus 79 ~i~~~~~p~~i~~~-~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~-~~~~~v~ 155 (328)
T 3dsm_A 79 RITGFTSPRYIHFL-SDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCW-SYQNRIL 155 (328)
T ss_dssp EEECCSSEEEEEEE-ETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEEC-TTCCEEE
T ss_pred EcCCCCCCcEEEEe-CCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcC-CCCCEEE
Confidence 22345678899998 789888887789999999999999887775 34 6778888 5566655532 1357999
Q ss_pred EEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCC----------CcEEEEECCCCeEEEEcccC-CCceEEEEEc
Q 016446 169 ILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQEN----------ENLQILDVRNAELMEVSRTE-FMTPSAFIFL 237 (389)
Q Consensus 169 lWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D----------~tIklWd~~tg~~~~~l~gh-~~~v~sv~fs 237 (389)
++|+++++.++++... .....+++. +++..+++...+ ++|.++|.++++..+++.-. ...+..++|+
T Consensus 156 viD~~t~~~~~~i~~g-~~p~~i~~~-~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~ 233 (328)
T 3dsm_A 156 KIDTETDKVVDELTIG-IQPTSLVMD-KYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLN 233 (328)
T ss_dssp EEETTTTEEEEEEECS-SCBCCCEEC-TTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEEC
T ss_pred EEECCCCeEEEEEEcC-CCccceEEc-CCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEe
Confidence 9999999999998742 334677776 555444444333 79999999999988776432 2478999999
Q ss_pred CCCcEEEEEcCCeEEEEeCC-CcEEEE--eccCcCCcCCCCeeEEEECC-CCCEEEEEecCCCcccccCCCCCeEEEEeC
Q 016446 238 YENQLFLTFRNRTVAVWNFR-GELVTS--FEDHLLWHPDCNTNNIYITS-DQDLIISYCKAEPEDQWMEGSAGSINVSSI 313 (389)
Q Consensus 238 pdg~~laS~sD~tIklWd~~-G~~l~t--l~gh~~~~~~~~v~sv~fSp-dG~~laS~s~D~~~~~~~~s~D~tIklWd~ 313 (389)
||+++|..+.. +|.+||.. +++... +..+.. ....++|+| +|++.++...| -..+++|.+||.
T Consensus 234 ~d~~~lyv~~~-~v~~~d~~t~~~~~~~~~~~~~~-----~p~gi~vdp~~g~lyva~~~~-------y~~~~~V~v~d~ 300 (328)
T 3dsm_A 234 GTRDTLYWINN-DIWRMPVEADRVPVRPFLEFRDT-----KYYGLTVNPNNGEVYVADAID-------YQQQGIVYRYSP 300 (328)
T ss_dssp TTSCEEEEESS-SEEEEETTCSSCCSSCSBCCCSS-----CEEEEEECTTTCCEEEEECTT-------SSSEEEEEEECT
T ss_pred cCCCEEEEEcc-EEEEEECCCCceeeeeeecCCCC-----ceEEEEEcCCCCeEEEEcccc-------cccCCEEEEECC
Confidence 99888766533 89999996 775321 221111 258999999 66666765211 012489999998
Q ss_pred CCCeEEEEecC
Q 016446 314 LTGKCLAKINA 324 (389)
Q Consensus 314 ~tg~~l~tl~g 324 (389)
. |+.++++.-
T Consensus 301 ~-g~~~~~i~~ 310 (328)
T 3dsm_A 301 Q-GKLIDEFYV 310 (328)
T ss_dssp T-CCEEEEEEE
T ss_pred C-CCEEEEEEe
Confidence 7 999998853
No 190
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.79 E-value=4.1e-15 Score=137.63 Aligned_cols=267 Identities=10% Similarity=0.058 Sum_probs=187.4
Q ss_pred ceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe-eecccCceeEEEecCCCeEEEEecCCC
Q 016446 45 EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDS 123 (389)
Q Consensus 45 ~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~ 123 (389)
..+++|++.|+|+.+++ ...+ ..+..++.. |+. ..+. ......|..++++ |+|.++++...++
T Consensus 15 ~~~~~i~~d~~g~l~v~----~~~~------~~v~~~d~~-~~~----~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~ 78 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWIT----QHKA------NMISCINLD-GKI----TEYPLPTPDAKVMCLTIS-SDGEVWFTENAAN 78 (299)
T ss_dssp CCEEEEEECTTSCEEEE----ETTT------TEEEEECTT-CCE----EEEECSSTTCCEEEEEEC-TTSCEEEEETTTT
T ss_pred CCccceEECCCCCEEEE----ecCC------CcEEEEcCC-CCe----EEecCCcccCceeeEEEC-CCCCEEEeCCCCC
Confidence 68999999999997766 2233 456666655 553 1121 1123457789998 8999999888789
Q ss_pred eEEEEeCCCCeE-EEEec--CCcEEEEEEcC-CceEEEEecCCCCeeEEEEEcCCCeEEEEE-eecCCceeEEEEEecCC
Q 016446 124 IYKVFDLKNYTM-LYSIS--DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVF-YHLLHRNKKVDFIEQFN 198 (389)
Q Consensus 124 tiklWdl~~g~~-l~tl~--~~~V~~vafS~-g~~la~~~~~s~d~tiklWd~~tG~~l~tl-~~~~~~~~~v~f~~~~~ 198 (389)
.|..||.+ ++. ...+. ...+.++++.+ |... .+.. .++.|..||. +|+..... ..+......+++. +++
T Consensus 79 ~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~-v~~~--~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~-~~g 152 (299)
T 2z2n_A 79 KIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIW-FTEM--NGNRIGRITD-DGKIREYELPNKGSYPSFITLG-SDN 152 (299)
T ss_dssp EEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEE-EEET--TTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC-TTS
T ss_pred eEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEE-EEec--CCceEEEECC-CCCEEEecCCCCCCCCceEEEc-CCC
Confidence 99999985 553 33333 35799999995 5544 4432 2468999998 77765432 2334556788876 555
Q ss_pred CeEEEEeCCCcEEEEECCCCeEEEE-cccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCCCcEEEE-eccCcCCcCCCC
Q 016446 199 EKLLVKQENENLQILDVRNAELMEV-SRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGELVTS-FEDHLLWHPDCN 275 (389)
Q Consensus 199 ~~l~~~s~D~tIklWd~~tg~~~~~-l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~G~~l~t-l~gh~~~~~~~~ 275 (389)
..+++...++.|..||. +|+.... +..+...+..+++.|+|++.++.. ++.|..||.+|+.... +..+.. .
T Consensus 153 ~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~-----~ 226 (299)
T 2z2n_A 153 ALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITTSGEITEFKIPTPNA-----R 226 (299)
T ss_dssp CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTC-----C
T ss_pred CEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECCCCcEEEEECCCCCC-----C
Confidence 55554557899999999 8887654 455566799999999999999887 8999999997765432 222222 2
Q ss_pred eeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEE-ecCCCCCCCcccccCCCCCCCccccccccceec
Q 016446 276 TNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAK-INATNCSPKVDDELGSSSTGKSKKLNKSSYIRS 354 (389)
Q Consensus 276 v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~t-l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (389)
+.+++++|+|++.++... ++.|..||. +|+.... +.++.
T Consensus 227 ~~~i~~~~~g~l~v~~~~-----------~~~i~~~d~-~g~~~~~~~~~~~---------------------------- 266 (299)
T 2z2n_A 227 PHAITAGAGIDLWFTEWG-----------ANKIGRLTS-NNIIEEYPIQIKS---------------------------- 266 (299)
T ss_dssp EEEEEECSTTCEEEEETT-----------TTEEEEEET-TTEEEEEECSSSS----------------------------
T ss_pred ceeEEECCCCCEEEeccC-----------CceEEEECC-CCceEEEeCCCCC----------------------------
Confidence 689999999998887533 379999997 5764322 22222
Q ss_pred ccccccCCEEEEEECCCCCEEEEecCCCcEEE
Q 016446 355 TVGEALEDITSLFYDEERNEIYTGNRHGLVHV 386 (389)
Q Consensus 355 ~~~~~~~~V~svafSpdg~~LaSgs~D~tIrl 386 (389)
..+.++++ ++|+++++.+.++.+++
T Consensus 267 ------~~~~~i~~-~~g~l~v~~~~~~l~~~ 291 (299)
T 2z2n_A 267 ------AEPHGICF-DGETIWFAMECDKIGKL 291 (299)
T ss_dssp ------CCEEEEEE-CSSCEEEEETTTEEEEE
T ss_pred ------CccceEEe-cCCCEEEEecCCcEEEE
Confidence 47899999 99999998876766665
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.78 E-value=1.7e-16 Score=149.41 Aligned_cols=234 Identities=9% Similarity=-0.054 Sum_probs=167.6
Q ss_pred ceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCC
Q 016446 33 NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVN 112 (389)
Q Consensus 33 g~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pd 112 (389)
+..+..+..+ .....+++|+|+|+.|+.+ +..+ ..+..|+...+ . ..|. .....|..++|+ ||
T Consensus 17 ~~~~~~l~~~-~~~~eg~~~d~~g~~l~~~---~~~~------~~i~~~~~~~~-~----~~~~-~~~~~~~~l~~~-~d 79 (296)
T 3e5z_A 17 GAEARRLADG-FTWTEGPVYVPARSAVIFS---DVRQ------NRTWAWSDDGQ-L----SPEM-HPSHHQNGHCLN-KQ 79 (296)
T ss_dssp TCCCEEEECC-CSSEEEEEEEGGGTEEEEE---EGGG------TEEEEEETTSC-E----EEEE-SSCSSEEEEEEC-TT
T ss_pred CCcEEEEecC-CccccCCeEeCCCCEEEEE---eCCC------CEEEEEECCCC-e----EEEE-CCCCCcceeeEC-CC
Confidence 5555566654 3788999999999944432 3344 56777886554 2 1232 234557789998 89
Q ss_pred CeEEEEecCCCeEEEEeCCCCeEEEEec------CCcEEEEEEcC-CceEEEEec--------------CCCCeeEEEEE
Q 016446 113 GKVLTYSAQDSIYKVFDLKNYTMLYSIS------DKHVQEIKISP-GIMLLIFNR--------------SSSHVPLKILS 171 (389)
Q Consensus 113 G~~Las~s~D~tiklWdl~~g~~l~tl~------~~~V~~vafS~-g~~la~~~~--------------~s~d~tiklWd 171 (389)
|+++++...++.|.+||.++|+...... ...+.+++|+| |.++++.+. ....+.|..++
T Consensus 80 g~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~ 159 (296)
T 3e5z_A 80 GHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLA 159 (296)
T ss_dssp CCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEEC
T ss_pred CcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEEC
Confidence 9999988888999999998988653332 13567899994 665554210 00112444455
Q ss_pred cCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECC-CCeE---EEEcccCCCceEEEEEcCCCcEEEEEc
Q 016446 172 IEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVR-NAEL---MEVSRTEFMTPSAFIFLYENQLFLTFR 247 (389)
Q Consensus 172 ~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~-tg~~---~~~l~gh~~~v~sv~fspdg~~laS~s 247 (389)
.. |+. ..+..+......++|+ |++..+++.+.+++|++||+. +|++ .+.+..+...+..++|.|+|+++++.
T Consensus 160 ~~-g~~-~~~~~~~~~~~gi~~s-~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~- 235 (296)
T 3e5z_A 160 PD-GTL-SAPIRDRVKPNGLAFL-PSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA- 235 (296)
T ss_dssp TT-SCE-EEEECCCSSEEEEEEC-TTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-
T ss_pred CC-CCE-EEeecCCCCCccEEEC-CCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-
Confidence 43 554 4445555667899997 778888556789999999997 6766 44455566678899999999998888
Q ss_pred CCeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEE-CCCCCEEEEEec
Q 016446 248 NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYI-TSDQDLIISYCK 293 (389)
Q Consensus 248 D~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~f-SpdG~~laS~s~ 293 (389)
++.|.+||.+|+++..+..+.. +.+++| +|||++|..++.
T Consensus 236 ~~~v~~~~~~g~~~~~~~~~~~------~~~~~f~~~d~~~L~v~t~ 276 (296)
T 3e5z_A 236 GDGVHVLTPDGDELGRVLTPQT------TSNLCFGGPEGRTLYMTVS 276 (296)
T ss_dssp TTEEEEECTTSCEEEEEECSSC------CCEEEEESTTSCEEEEEET
T ss_pred CCeEEEECCCCCEEEEEECCCC------ceeEEEECCCCCEEEEEcC
Confidence 8999999999999999887654 378999 799999988765
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.78 E-value=2.9e-17 Score=175.72 Aligned_cols=275 Identities=11% Similarity=0.056 Sum_probs=182.9
Q ss_pred EeeCCCEEEEEEEeecCCCcceeeeeeeEeEec-----cCCCCCcceeEee-----ecccCceeEEEecCCCeEEEEecC
Q 016446 52 YNKNNDSLITVSVYASDNFSSLKCRSTKIEYIR-----RGKPDSGFALFES-----ESLKWPGFVEFDDVNGKVLTYSAQ 121 (389)
Q Consensus 52 ~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~-----~g~~~~~~~l~~~-----~~~~~~~~v~Fs~pdG~~Las~s~ 121 (389)
.+|||+.++.....++.+ ...||-.. .|+. ..|+.. ++...+.+++|| |||++||.++.
T Consensus 114 p~pdG~~~~~~~~~~~~~-------~~~l~~~~~~~~~~~~~---~~lld~~~l~~~~~~~~~~~~~S-PDG~~la~~~~ 182 (741)
T 1yr2_A 114 PQRRGASVFYSWNSGLMN-------QSQLLVRPADAPVGTKG---RVLLDPNTWAKDGATALDAWAAS-DDGRLLAYSVQ 182 (741)
T ss_dssp CEEETTEEEEEEECSSCS-------SCEEEEEETTSCTTCCC---EEEECGGGCC----EEEEEEEEC-TTSSEEEEEEE
T ss_pred CEEECCEEEEEEEcCCCe-------EEEEEEEcCCccCCCCC---EEEECHHHhccCCCEEEEeEEEC-CCCCEEEEEEc
Confidence 359999999977654432 23344432 2332 233221 111134568998 99999998775
Q ss_pred C-----CeEEEEeCCCCeEEEE-ecCCcEEEEEEcCCceEEEEecCCC-----------CeeEEEEEcCCCe----EEEE
Q 016446 122 D-----SIYKVFDLKNYTMLYS-ISDKHVQEIKISPGIMLLIFNRSSS-----------HVPLKILSIEDGT----VLKV 180 (389)
Q Consensus 122 D-----~tiklWdl~~g~~l~t-l~~~~V~~vafS~g~~la~~~~~s~-----------d~tiklWd~~tG~----~l~t 180 (389)
+ .+|++||+++|+.+.. +....+.+++|||++.|+.++.+.. ...|++|++.+++ ++..
T Consensus 183 ~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~ 262 (741)
T 1yr2_A 183 DGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFA 262 (741)
T ss_dssp ETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEEC
T ss_pred CCCCceEEEEEEECCCCCCCCccCCCceeccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEec
Confidence 4 5799999999997543 2222236799994488888765433 3459999998886 3322
Q ss_pred EeecCCceeEEEEEecCCCeEEEEeCC-----CcEEEEECCCC--eEEEEcccCCCceEEEEEcCCCcEEEEEc-C----
Q 016446 181 FYHLLHRNKKVDFIEQFNEKLLVKQEN-----ENLQILDVRNA--ELMEVSRTEFMTPSAFIFLYENQLFLTFR-N---- 248 (389)
Q Consensus 181 l~~~~~~~~~v~f~~~~~~~l~~~s~D-----~tIklWd~~tg--~~~~~l~gh~~~v~sv~fspdg~~laS~s-D---- 248 (389)
...+...+..+.|+ ||+.+|+..+.+ ..|.+||+.++ ++.+.+..+...+....+ |+|+.|+..+ +
T Consensus 263 ~~~~~~~~~~~~~S-pDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~-~dg~~l~~~s~~~~~~ 340 (741)
T 1yr2_A 263 TPELPKRGHGASVS-SDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVD-GVGDQLWFVSGDGAPL 340 (741)
T ss_dssp CTTCTTCEEEEEEC-TTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEE-EETTEEEEEECTTCTT
T ss_pred cCCCCeEEEEEEEC-CCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEe-ccCCEEEEEECCCCCC
Confidence 22222346788887 788888887644 48999999988 525566666666666644 8888777665 3
Q ss_pred CeEEEEeCC-C-cEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCC-CCeEEEEecCC
Q 016446 249 RTVAVWNFR-G-ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL-TGKCLAKINAT 325 (389)
Q Consensus 249 ~tIklWd~~-G-~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~-tg~~l~tl~gH 325 (389)
+.|.+||++ + ...+.+..|... .+.+++|+ ++++++++..| +..+||.+. +|++++.|..+
T Consensus 341 ~~l~~~d~~~~~~~~~~l~~~~~~----~l~~~~~~-~~~lv~~~~~d-----------g~~~l~~~~~~g~~~~~l~~~ 404 (741)
T 1yr2_A 341 KKIVRVDLSGSTPRFDTVVPESKD----NLESVGIA-GNRLFASYIHD-----------AKSQVLAFDLDGKPAGAVSLP 404 (741)
T ss_dssp CEEEEEECSSSSCEEEEEECCCSS----EEEEEEEE-BTEEEEEEEET-----------TEEEEEEEETTSCEEEECBCS
T ss_pred CEEEEEeCCCCccccEEEecCCCC----eEEEEEEE-CCEEEEEEEEC-----------CEEEEEEEeCCCCceeeccCC
Confidence 359999997 4 344444444332 26778887 67788887764 787777553 57788877654
Q ss_pred CCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEE----EecCCCcEEEcc
Q 016446 326 NCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIY----TGNRHGLVHVWS 388 (389)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~La----Sgs~D~tIrlW~ 388 (389)
.. ..|..++++|||+.|+ |....++|.+||
T Consensus 405 ~~---------------------------------~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d 438 (741)
T 1yr2_A 405 GI---------------------------------GSASGLSGRPGDRHAYLSFSSFTQPATVLALD 438 (741)
T ss_dssp SS---------------------------------CEEEEEECCBTCSCEEEEEEETTEEEEEEEEE
T ss_pred CC---------------------------------eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEE
Confidence 21 3688999999999877 555668898887
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.77 E-value=1.4e-16 Score=146.53 Aligned_cols=230 Identities=10% Similarity=0.010 Sum_probs=161.7
Q ss_pred CceeEEEecCCCeEEE-EecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEcC-CceEEEEecCCCCeeEEEEEcCCCeE
Q 016446 102 WPGFVEFDDVNGKVLT-YSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTV 177 (389)
Q Consensus 102 ~~~~v~Fs~pdG~~La-s~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS~-g~~la~~~~~s~d~tiklWd~~tG~~ 177 (389)
.|.+++|+ |+|++++ +.+.++.|.+||..++....... ...+.+++|++ |. |..+.. ++.|..||..++..
T Consensus 25 ~p~~i~~~-~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~---~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 25 SPSGVAVD-SAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTDF---NNRVVTLAAGSNNQ 99 (270)
T ss_dssp CEEEEEEC-TTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCC-EEEEET---TTEEEEECTTCSCC
T ss_pred CccceEEC-CCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCC-EEEEcC---CCEEEEEeCCCceE
Confidence 67789998 8999888 66788999999976554322112 25788999994 66 444432 46899999766543
Q ss_pred EEEEe-ecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEe
Q 016446 178 LKVFY-HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWN 255 (389)
Q Consensus 178 l~tl~-~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd 255 (389)
..+. ........+++. +++..+++...++.|.+||..+.........+...+..+++.|+|+++++.. ++.|.+||
T Consensus 100 -~~~~~~~~~~p~~i~~~-~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 177 (270)
T 1rwi_B 100 -TVLPFDGLNYPEGLAVD-TQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLE 177 (270)
T ss_dssp -EECCCCSCSSEEEEEEC-TTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEEC
T ss_pred -eeeecCCcCCCcceEEC-CCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEe
Confidence 3443 222456788886 5565555556789999998776665544444555789999999999999887 89999999
Q ss_pred CCCc-EEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccc
Q 016446 256 FRGE-LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDE 334 (389)
Q Consensus 256 ~~G~-~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~ 334 (389)
.++. .......+.. ....++++|+|.++++... ++.|.+||..+.........+
T Consensus 178 ~~~~~~~~~~~~~~~-----~p~~i~~d~~g~l~v~~~~-----------~~~v~~~~~~~~~~~~~~~~~--------- 232 (270)
T 1rwi_B 178 AESNNQVVLPFTDIT-----APWGIAVDEAGTVYVTEHN-----------TNQVVKLLAGSTTSTVLPFTG--------- 232 (270)
T ss_dssp TTTCCEEECCCSSCC-----SEEEEEECTTCCEEEEETT-----------TSCEEEECTTCSCCEECCCCS---------
T ss_pred cCCCceEeecccCCC-----CceEEEECCCCCEEEEECC-----------CCcEEEEcCCCCcceeeccCC---------
Confidence 9854 3332222222 2689999999988887643 478999997644332211111
Q ss_pred cCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEcc
Q 016446 335 LGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
+..+.+++|+|||+.+++.+.+++|++++
T Consensus 233 -------------------------~~~p~~i~~~~~g~l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 233 -------------------------LNTPLAVAVDSDRTVYVADRGNDRVVKLT 261 (270)
T ss_dssp -------------------------CSCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred -------------------------CCCceeEEECCCCCEEEEECCCCEEEEEc
Confidence 14789999999999999999999999986
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.76 E-value=1.4e-15 Score=147.17 Aligned_cols=247 Identities=10% Similarity=-0.013 Sum_probs=183.0
Q ss_pred EEEEEee-ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEec
Q 016446 6 VIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIR 84 (389)
Q Consensus 6 v~~i~~~-~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~ 84 (389)
..+|.+. +.+.++...+++|.+||.+|++.+.++... ...+.|+++|+|+..++ ...+ ..+.++|..
T Consensus 46 ~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~--~~p~~i~~~~~g~lyv~----~~~~------~~v~~iD~~ 113 (328)
T 3dsm_A 46 AQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGF--TSPRYIHFLSDEKAYVT----QIWD------YRIFIINPK 113 (328)
T ss_dssp EEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEECC--SSEEEEEEEETTEEEEE----EBSC------SEEEEEETT
T ss_pred ceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCCC--CCCcEEEEeCCCeEEEE----ECCC------CeEEEEECC
Confidence 4677777 555566666899999999999999999643 57899999999964444 2245 678888888
Q ss_pred cCCCCCcceeEeeeccc------CceeEEEecCCCeEEEEec-CCCeEEEEeCCCCeEEEEec-CCcEEEEEEcC-CceE
Q 016446 85 RGKPDSGFALFESESLK------WPGFVEFDDVNGKVLTYSA-QDSIYKVFDLKNYTMLYSIS-DKHVQEIKISP-GIML 155 (389)
Q Consensus 85 ~g~~~~~~~l~~~~~~~------~~~~v~Fs~pdG~~Las~s-~D~tiklWdl~~g~~l~tl~-~~~V~~vafS~-g~~l 155 (389)
++++. ....... .|..+++. +++++++.. .+++|.++|+++++.+.++. +.....++|+| |.++
T Consensus 114 t~~~~-----~~i~~g~~~~~~~~p~~i~~~--~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~ 186 (328)
T 3dsm_A 114 TYEIT-----GYIECPDMDMESGSTEQMVQY--GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMW 186 (328)
T ss_dssp TTEEE-----EEEECTTCCTTTCBCCCEEEE--TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEE
T ss_pred CCeEE-----EEEEcCCccccCCCcceEEEE--CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEE
Confidence 77752 1111222 56778884 678777765 58999999999999888876 45667899995 5544
Q ss_pred EEEecCCC--------CeeEEEEEcCCCeEEEEEeec-CCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEE--Ec
Q 016446 156 LIFNRSSS--------HVPLKILSIEDGTVLKVFYHL-LHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELME--VS 224 (389)
Q Consensus 156 a~~~~~s~--------d~tiklWd~~tG~~l~tl~~~-~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~--~l 224 (389)
.++.... ...|.++|..+++.++++... ......++|+ |+++.+.+... +|.+||.++++... .+
T Consensus 187 -v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~-~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~ 262 (328)
T 3dsm_A 187 -TITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLN-GTRDTLYWINN--DIWRMPVEADRVPVRPFL 262 (328)
T ss_dssp -EEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEEC-TTSCEEEEESS--SEEEEETTCSSCCSSCSB
T ss_pred -EEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEe-cCCCEEEEEcc--EEEEEECCCCceeeeeee
Confidence 4433210 268999999999999888632 2367889997 67777777654 99999999998742 22
Q ss_pred ccCCCceEEEEEcC-CCcEEEEE----c-CCeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEE
Q 016446 225 RTEFMTPSAFIFLY-ENQLFLTF----R-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYI 281 (389)
Q Consensus 225 ~gh~~~v~sv~fsp-dg~~laS~----s-D~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~f 281 (389)
..+...+..++++| +|++.++. . +++|.+||.+|+++++++--..| ..++|
T Consensus 263 ~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i~~G~~P------~~~~~ 319 (328)
T 3dsm_A 263 EFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFYVGIIP------GAFCW 319 (328)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEEEEEESE------EEEEE
T ss_pred cCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEEEeccCc------ceEEE
Confidence 33356799999999 88898988 6 89999999999999988743333 56666
No 195
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.75 E-value=1.1e-15 Score=153.46 Aligned_cols=254 Identities=13% Similarity=0.116 Sum_probs=180.6
Q ss_pred cccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEecC-CcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCe
Q 016446 99 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGT 176 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~~-~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~ 176 (389)
.+..|..|+|+ |+|+++++...++.|++||++++++...... .... ++|+ +|+.|+++...+ ...|.+++..++.
T Consensus 129 ~~~~P~~la~d-~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~-~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 129 KFKYMWGIAAV-GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEG-THTVYVYMKASGW 205 (409)
T ss_dssp CCCCEEEEEEC-STTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSST-TCEEEEEEGGGTT
T ss_pred ccCCceEEEEe-CCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCC-CceEEEEEcCCCc
Confidence 45678899998 8999999988899999999988887655543 3334 9999 577777764332 2389999988877
Q ss_pred EEEEE----eecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEE----cccCCCce-E-EEEEcC-CCcEEEE
Q 016446 177 VLKVF----YHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEV----SRTEFMTP-S-AFIFLY-ENQLFLT 245 (389)
Q Consensus 177 ~l~tl----~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~----l~gh~~~v-~-sv~fsp-dg~~laS 245 (389)
.++.+ .........+++. |+++.|.....+++|+.||..+++.... ..++...- . .++|+| +|+++++
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~-p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALD-ETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEEC-TTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred eeEEeeeccchhcCCcEEEEEe-CCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 66666 2234566889987 5567777776789999999998875443 33333332 4 899999 6888888
Q ss_pred Ec-CCeEEEEeCCCcEEEEeccCcC---Cc-------CCCCeeEEEECCCCCEEEEEe-cCCCcccccCCCCCeEEEEeC
Q 016446 246 FR-NRTVAVWNFRGELVTSFEDHLL---WH-------PDCNTNNIYITSDQDLIISYC-KAEPEDQWMEGSAGSINVSSI 313 (389)
Q Consensus 246 ~s-D~tIklWd~~G~~l~tl~gh~~---~~-------~~~~v~sv~fSpdG~~laS~s-~D~~~~~~~~s~D~tIklWd~ 313 (389)
.. ++.|+.|+.+|+ +.++.|+.. .. .......++|+|||+++++-+ . ++.|+.||+
T Consensus 285 d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~-----------~~~I~~~~~ 352 (409)
T 3hrp_A 285 DQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK-----------GYCLRKLDI 352 (409)
T ss_dssp ETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT-----------TCEEEEEET
T ss_pred eCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC-----------CCEEEEEEC
Confidence 87 999999999987 455666530 00 001247999999999888754 3 489999998
Q ss_pred CCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEcc
Q 016446 314 LTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 314 ~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
.+|+ +.++.|+... .+ ...+ . .....+...+.|+++|||+++++-..++.||...
T Consensus 353 ~~G~-v~~~~g~~~~-~g---~~~g-~--------------~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~ 407 (409)
T 3hrp_A 353 LDGY-VSTVAGQVDV-AS---QIDG-T--------------PLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYA 407 (409)
T ss_dssp TTTE-EEEEEECTTC-BS---CCCB-S--------------TTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEE
T ss_pred CCCE-EEEEeCCCCC-CC---cCCC-C--------------hhceEeCCceEEEEcCCCCEEEEECCCCeEEEEE
Confidence 8887 5677676310 00 0000 0 0011135789999999999999999999998653
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.74 E-value=5.8e-16 Score=147.49 Aligned_cols=232 Identities=11% Similarity=0.122 Sum_probs=176.4
Q ss_pred ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcc
Q 016446 13 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 92 (389)
Q Consensus 13 ~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~ 92 (389)
+++|++++.++.|++||.+||+.+.++..+....+++++++|+|+.|++ .+ ..+..+|. +|+.
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs------~~------~~V~~~d~-~G~~---- 67 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS------YS------KGAKMITR-DGRE---- 67 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE------CB------SEEEEECT-TSCE----
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe------CC------CCEEEECC-CCCE----
Confidence 7899999999999999999999999999864347899999999998884 23 45777775 7876
Q ss_pred eeEeeecc--cCceeEEEecCCCeEEEEecC-CCeEEEEeCCCCeEEEEec--C------CcEEEEEEc-CCceEEEEec
Q 016446 93 ALFESESL--KWPGFVEFDDVNGKVLTYSAQ-DSIYKVFDLKNYTMLYSIS--D------KHVQEIKIS-PGIMLLIFNR 160 (389)
Q Consensus 93 ~l~~~~~~--~~~~~v~Fs~pdG~~Las~s~-D~tiklWdl~~g~~l~tl~--~------~~V~~vafS-~g~~la~~~~ 160 (389)
+|..... ..+.++++. |||++|++.+. ++.|..+|. +|+.+.++. . ...+.+++. +|.++++.
T Consensus 68 -~W~~~~~~~~~~~~~~~~-~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~-- 142 (276)
T 3no2_A 68 -LWNIAAPAGCEMQTARIL-PDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL-- 142 (276)
T ss_dssp -EEEEECCTTCEEEEEEEC-TTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEE--
T ss_pred -EEEEcCCCCccccccEEC-CCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEe--
Confidence 5653321 245678998 89999998887 777878885 899876664 1 245667888 68888764
Q ss_pred CCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccC------CCceEEE
Q 016446 161 SSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTE------FMTPSAF 234 (389)
Q Consensus 161 ~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh------~~~v~sv 234 (389)
..++.|..||.+ |+.+.++... .....+.+. +++..++++..++.|..+|.++|+.+..+..+ ...+..+
T Consensus 143 -~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~-~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~ 218 (276)
T 3no2_A 143 -FATSEVREIAPN-GQLLNSVKLS-GTPFSSAFL-DNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQL 218 (276)
T ss_dssp -TTTTEEEEECTT-SCEEEEEECS-SCCCEEEEC-TTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEE
T ss_pred -cCCCEEEEECCC-CCEEEEEECC-CCccceeEc-CCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccc
Confidence 345899999987 9999999854 455667765 56677777778889999999999998887543 2348889
Q ss_pred EEcCCCcEEEEEcCC---------eEEEEeC--CCcEEEEeccCcCC
Q 016446 235 IFLYENQLFLTFRNR---------TVAVWNF--RGELVTSFEDHLLW 270 (389)
Q Consensus 235 ~fspdg~~laS~sD~---------tIklWd~--~G~~l~tl~gh~~~ 270 (389)
+..|+|+++++.+++ ..++..+ +|+++-++..+...
T Consensus 219 ~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~~~ 265 (276)
T 3no2_A 219 FPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDKVKF 265 (276)
T ss_dssp EECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECCTTTS
T ss_pred eEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEecCcccc
Confidence 999999999988533 2345555 47777777766543
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.73 E-value=3e-15 Score=140.34 Aligned_cols=232 Identities=12% Similarity=0.124 Sum_probs=165.0
Q ss_pred cccCceeEEEecCCCeEEEE-------ecCCCeEEEEeCCCCeEEE-Ee-----cCCcEEEEEEcCC-ceEEEEecCCCC
Q 016446 99 SLKWPGFVEFDDVNGKVLTY-------SAQDSIYKVFDLKNYTMLY-SI-----SDKHVQEIKISPG-IMLLIFNRSSSH 164 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~~Las-------~s~D~tiklWdl~~g~~l~-tl-----~~~~V~~vafS~g-~~la~~~~~s~d 164 (389)
.+..|..++|+ |+|+++++ +..++.|.+||+.+++... .. ....+.++++++. +.|..+...
T Consensus 16 ~~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~--- 91 (314)
T 1pjx_A 16 DIPGAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR--- 91 (314)
T ss_dssp CCTTCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT---
T ss_pred cCCCccCceEC-CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC---
Confidence 44567889998 89999888 6788999999998888643 22 2357999999943 444444322
Q ss_pred eeEEEEEcCCCeEEEE-Eee----cCCceeEEEEEecCCCeEEEEeCC---------------CcEEEEECCCCeEEEEc
Q 016446 165 VPLKILSIEDGTVLKV-FYH----LLHRNKKVDFIEQFNEKLLVKQEN---------------ENLQILDVRNAELMEVS 224 (389)
Q Consensus 165 ~tiklWd~~tG~~l~t-l~~----~~~~~~~v~f~~~~~~~l~~~s~D---------------~tIklWd~~tg~~~~~l 224 (389)
..|.+||.. |+.... ... ....+..+++. +++..+++...+ +.|..+|.. |+.....
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d-~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFD-YEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD 168 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEEC-TTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE
T ss_pred CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEEC-CCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec
Confidence 368999988 886543 221 11346788886 556555555444 567777776 7665443
Q ss_pred ccCCCceEEEEEc----CCCcE-EEEEc-CCeEEEEeCC--Cc-----EEEEeccCc-CCcCCCCeeEEEECCCCCEEEE
Q 016446 225 RTEFMTPSAFIFL----YENQL-FLTFR-NRTVAVWNFR--GE-----LVTSFEDHL-LWHPDCNTNNIYITSDQDLIIS 290 (389)
Q Consensus 225 ~gh~~~v~sv~fs----pdg~~-laS~s-D~tIklWd~~--G~-----~l~tl~gh~-~~~~~~~v~sv~fSpdG~~laS 290 (389)
.+...+..++|+ |||+. +++.. ++.|.+||.+ |+ .+..+.++. .. ...++++|||+++++
T Consensus 169 -~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~-----p~~i~~d~~G~l~v~ 242 (314)
T 1pjx_A 169 -TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGG-----ADGMDFDEDNNLLVA 242 (314)
T ss_dssp -EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCE-----EEEEEEBTTCCEEEE
T ss_pred -cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCC-----CCceEECCCCCEEEE
Confidence 344567899999 99965 45556 8999999974 54 344455443 22 578999999999998
Q ss_pred EecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECC
Q 016446 291 YCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDE 370 (389)
Q Consensus 291 ~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSp 370 (389)
...+ +.|.+||..+|+.+..+..+. ..+.+++|+|
T Consensus 243 ~~~~-----------~~i~~~d~~~g~~~~~~~~~~----------------------------------~~~~~i~~~~ 277 (314)
T 1pjx_A 243 NWGS-----------SHIEVFGPDGGQPKMRIRCPF----------------------------------EKPSNLHFKP 277 (314)
T ss_dssp EETT-----------TEEEEECTTCBSCSEEEECSS----------------------------------SCEEEEEECT
T ss_pred EcCC-----------CEEEEEcCCCCcEeEEEeCCC----------------------------------CCceeEEECC
Confidence 6543 799999988899888887664 4799999999
Q ss_pred CCCEE-EEecCCCcEEEcc
Q 016446 371 ERNEI-YTGNRHGLVHVWS 388 (389)
Q Consensus 371 dg~~L-aSgs~D~tIrlW~ 388 (389)
||+.| ++...++.|..++
T Consensus 278 dg~~l~v~~~~~~~l~~~~ 296 (314)
T 1pjx_A 278 QTKTIFVTEHENNAVWKFE 296 (314)
T ss_dssp TSSEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCCCCeEEEEe
Confidence 99955 5556677787765
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.73 E-value=6.3e-14 Score=129.58 Aligned_cols=272 Identities=8% Similarity=0.033 Sum_probs=186.1
Q ss_pred ccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEe
Q 016446 4 TKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 81 (389)
Q Consensus 4 ~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~ 81 (389)
+.+..|.+. |.+.++...++.|..|+.. |+............+.+|++.|+|..+++. ..+ ..+..+
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~----~~~------~~i~~~ 83 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTE----NAA------NKIGRI 83 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEE----TTT------TEEEEE
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeC----CCC------CeEEEE
Confidence 467888887 6666666568999999997 765443222233689999999999977662 223 345555
Q ss_pred EeccCCCCCcceeEe-eecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEE-Eec--CCcEEEEEEcC-CceEE
Q 016446 82 YIRRGKPDSGFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY-SIS--DKHVQEIKISP-GIMLL 156 (389)
Q Consensus 82 ~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~-tl~--~~~V~~vafS~-g~~la 156 (389)
+. .|+. ..+. ......|..++|+ |+|+++++...++.|..||. +++... .+. ...+.++++.+ |...
T Consensus 84 ~~-~g~~----~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~- 155 (299)
T 2z2n_A 84 TK-KGII----KEYTLPNPDSAPYGITEG-PNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALW- 155 (299)
T ss_dssp CT-TSCE----EEEECSSTTCCEEEEEEC-TTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEE-
T ss_pred CC-CCcE----EEEeCCCcCCCceeeEEC-CCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEE-
Confidence 53 3442 1222 1133467789998 89999998888899999998 776543 333 35789999994 5554
Q ss_pred EEecCCCCeeEEEEEcCCCeEEEE-EeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEE-cccCCCceEEE
Q 016446 157 IFNRSSSHVPLKILSIEDGTVLKV-FYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEV-SRTEFMTPSAF 234 (389)
Q Consensus 157 ~~~~~s~d~tiklWd~~tG~~l~t-l~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~-l~gh~~~v~sv 234 (389)
.+. ..++.|..||. +|+.... +..+......+++. +++..+++...++.|.+||. +++.... +..+...+..+
T Consensus 156 v~~--~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i 230 (299)
T 2z2n_A 156 FTE--NQNNAIGRITE-SGDITEFKIPTPASGPVGITKG-NDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAI 230 (299)
T ss_dssp EEE--TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC-TTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEE
T ss_pred EEe--CCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEEC-CCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeE
Confidence 443 22368999998 8887653 33334456778876 55555555557899999999 8876543 44566789999
Q ss_pred EEcCCCcEEEEEc-CCeEEEEeCCCcEEEE-eccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEe
Q 016446 235 IFLYENQLFLTFR-NRTVAVWNFRGELVTS-FEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSS 312 (389)
Q Consensus 235 ~fspdg~~laS~s-D~tIklWd~~G~~l~t-l~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd 312 (389)
++.|+|+++++.. ++.|..||.+|+.... +.++... +.++++ ++|++.++.+. +.|..+|
T Consensus 231 ~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~-----~~~i~~-~~g~l~v~~~~------------~~l~~~~ 292 (299)
T 2z2n_A 231 TAGAGIDLWFTEWGANKIGRLTSNNIIEEYPIQIKSAE-----PHGICF-DGETIWFAMEC------------DKIGKLT 292 (299)
T ss_dssp EECSTTCEEEEETTTTEEEEEETTTEEEEEECSSSSCC-----EEEEEE-CSSCEEEEETT------------TEEEEEE
T ss_pred EECCCCCEEEeccCCceEEEECCCCceEEEeCCCCCCc-----cceEEe-cCCCEEEEecC------------CcEEEEE
Confidence 9999999999886 8999999998764322 3333322 689999 99999998642 4566667
Q ss_pred CCCCe
Q 016446 313 ILTGK 317 (389)
Q Consensus 313 ~~tg~ 317 (389)
..+++
T Consensus 293 ~~~~~ 297 (299)
T 2z2n_A 293 LIKDN 297 (299)
T ss_dssp EC---
T ss_pred cCccc
Confidence 66554
No 199
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.71 E-value=3.7e-16 Score=151.92 Aligned_cols=272 Identities=10% Similarity=0.061 Sum_probs=177.4
Q ss_pred eeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeE---eeecccCceeEEEecCCC
Q 016446 37 CFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALF---ESESLKWPGFVEFDDVNG 113 (389)
Q Consensus 37 ~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~---~~~~~~~~~~v~Fs~pdG 113 (389)
..+.... .....|+++|+|+.+++..... .+ . ++||.+..|++... +-+ ...++.+|..|+|+ |+|
T Consensus 10 ~~v~~~~-~~p~~va~~~~g~~~v~~~~~~-~~------~-~~l~~~~~g~~~~~-p~~~~~~~~~~~~p~gv~~d-~~g 78 (343)
T 2qe8_A 10 EVVAELS-LAPGNITLTPDGRLFLSLHQFY-QP------E-MQVAELTQDGLIPF-PPQSGNAIITFDTVLGIKSD-GNG 78 (343)
T ss_dssp EEEEEES-SCEEEEEECTTSCEEEEECGGG-CC------S-CSEEEEETTEEEES-CCCCSSCCCCCSCEEEEEEC-SSS
T ss_pred EEEEEcC-CCcceEEECCCCCEEEEeCCCC-CC------c-eEEEEECCCCeecC-CCcccCcccceeEeeEEEEc-CCC
Confidence 3344333 5789999999999877743221 12 1 45565555543100 000 11356678899998 899
Q ss_pred eEEEEecC-----CCeEEEEeCCCCeEEEEec--C------CcEEEEEEc-CCceEEEEecC-CCCeeEEEEEcCCCeEE
Q 016446 114 KVLTYSAQ-----DSIYKVFDLKNYTMLYSIS--D------KHVQEIKIS-PGIMLLIFNRS-SSHVPLKILSIEDGTVL 178 (389)
Q Consensus 114 ~~Las~s~-----D~tiklWdl~~g~~l~tl~--~------~~V~~vafS-~g~~la~~~~~-s~d~tiklWd~~tG~~l 178 (389)
++++.... +..|.+||+++|+.+.++. . ..+.+|+|+ +++.+..+... +.++.|.+||+.+|+..
T Consensus 79 ~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~ 158 (343)
T 2qe8_A 79 IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAA 158 (343)
T ss_dssp EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEE
T ss_pred cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEE
Confidence 98886544 6899999999999776653 1 356899999 45666555321 14679999999999988
Q ss_pred EEEeecCCcee-EEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeC
Q 016446 179 KVFYHLLHRNK-KVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNF 256 (389)
Q Consensus 179 ~tl~~~~~~~~-~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~ 256 (389)
+.+.+|..... .+.|. +++..+...+.|++++.|.. .+..++|+|||+.|..+. ++. +||.+
T Consensus 159 r~~~~~~~~~~~~~~~~-~~g~~~~~~~~~g~~~~~~~--------------~~~gia~s~dg~~ly~~~~~~~-~l~~~ 222 (343)
T 2qe8_A 159 RVLQGYPGIAPEDIDLV-IDGVPVQIGQPDGTVIRPHL--------------GVNGIVLDAENEWLYLSPMHST-SMYRI 222 (343)
T ss_dssp EECTTCTTTSCCSCCCE-ETTEECBEECTTSCEECCCC--------------CEEEEEECTTSCEEEEEESSCS-EEEEE
T ss_pred EEecCCCccccccccee-ECCEEEEeccCCCceeceec--------------ccceeEeccCCCEEEEEeCCCC-eEEEE
Confidence 88765422211 13444 34555555678888877742 467899999999887776 554 56654
Q ss_pred C------Cc-----EEE--EeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEec
Q 016446 257 R------GE-----LVT--SFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKIN 323 (389)
Q Consensus 257 ~------G~-----~l~--tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~ 323 (389)
+ +. ... ...++... ...++++|||.++++... ++.|.+||..+|+......
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~g~~g~-----pdgia~d~~G~l~va~~~-----------~~~V~~~d~~~G~~~~~~~ 286 (343)
T 2qe8_A 223 KSADLSNLQLTDAELGSKIERYSEKPI-----CDGISIDKDHNIYVGDLA-----------HSAIGVITSADRAYKLLVT 286 (343)
T ss_dssp EHHHHTCTTCCHHHHHTTCEEEEECCS-----CSCEEECTTCCEEEEEGG-----------GTEEEEEETTTTEEEEEEE
T ss_pred EHHHhcCCCCChhhhhcceEecccCCC-----CceEEECCCCCEEEEccC-----------CCeEEEEECCCCCEEEEEE
Confidence 3 11 110 12233322 368999999999998765 3899999975787533332
Q ss_pred CCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcE
Q 016446 324 ATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLV 384 (389)
Q Consensus 324 gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tI 384 (389)
... +..+.+|+|+|||+++++.+..+.+
T Consensus 287 ~~~---------------------------------~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 287 DEK---------------------------------LSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp CGG---------------------------------GSCEEEEEECTTSCEEEEECCGGGS
T ss_pred CCc---------------------------------eecCCeeEECCCCcEEEEeCccccc
Confidence 111 1579999999999999998865443
No 200
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.70 E-value=6.1e-15 Score=135.53 Aligned_cols=249 Identities=9% Similarity=0.040 Sum_probs=166.6
Q ss_pred ceeeeeeecCCcc-eEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecC
Q 016446 33 NRRICFLNVSPDE-VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDV 111 (389)
Q Consensus 33 g~~l~tl~~~~~~-~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~p 111 (389)
++.+..+.+-..+ ...+|+++|+|+.++++ ...+ ..+..++...+.. ..+.......|..++|+ |
T Consensus 11 ~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~---~~~~------~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~~-~ 76 (270)
T 1rwi_B 11 GQTVLPFTGIDFRLSPSGVAVDSAGNVYVTS---EGMY------GRVVKLATGSTGT----TVLPFNGLYQPQGLAVD-G 76 (270)
T ss_dssp -CEECCCCSCSSCCCEEEEEECTTCCEEEEE---CSSS------CEEEEECC---------EECCCCSCCSCCCEEEC-T
T ss_pred CcccCccccccccCCccceEECCCCCEEEEc---cCCC------CcEEEecCCCccc----ceEeeCCcCCcceeEEC-C
Confidence 4444444432222 77899999999966622 2344 4565666433332 11112233467789998 8
Q ss_pred CCeEEEEecCCCeEEEEeCCCCeEEEEec--C-CcEEEEEEcC-CceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCc
Q 016446 112 NGKVLTYSAQDSIYKVFDLKNYTMLYSIS--D-KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHR 187 (389)
Q Consensus 112 dG~~Las~s~D~tiklWdl~~g~~l~tl~--~-~~V~~vafS~-g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~ 187 (389)
+|+++++.. ++.|.+||..+... ..+. + ..+.++++++ |... .+. ..++.|.+|+..++............
T Consensus 77 ~g~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~-v~~--~~~~~i~~~~~~~~~~~~~~~~~~~~ 151 (270)
T 1rwi_B 77 AGTVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDTQGAVY-VAD--RGNNRVVKLAAGSKTQTVLPFTGLND 151 (270)
T ss_dssp TCCEEEEET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEECTTCCEE-EEE--GGGTEEEEECTTCCSCEECCCCSCCS
T ss_pred CCCEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCcceEECCCCCEE-EEE--CCCCEEEEEECCCceeEeeccccCCC
Confidence 999888777 89999999865543 3332 2 5799999994 6544 443 22468999986665544332223345
Q ss_pred eeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCCCcEEEEec-
Q 016446 188 NKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGELVTSFE- 265 (389)
Q Consensus 188 ~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~G~~l~tl~- 265 (389)
...+++. +++..+++...++.|.+||..++........+...+..+++.|+|+++++.. ++.|.+||.++.....+.
T Consensus 152 p~~i~~~-~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~ 230 (270)
T 1rwi_B 152 PDGVAVD-NSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPF 230 (270)
T ss_dssp CCCEEEC-TTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCC
T ss_pred ceeEEEe-CCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeecc
Confidence 6788887 5566555556789999999988877665555557899999999999999887 899999999865443332
Q ss_pred cCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCe
Q 016446 266 DHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK 317 (389)
Q Consensus 266 gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~ 317 (389)
.+.. .+.+++|+|||+++++.+. +++|+++++...+
T Consensus 231 ~~~~-----~p~~i~~~~~g~l~v~~~~-----------~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 231 TGLN-----TPLAVAVDSDRTVYVADRG-----------NDRVVKLTSLEHH 266 (270)
T ss_dssp CSCS-----CEEEEEECTTCCEEEEEGG-----------GTEEEEECCCGGG
T ss_pred CCCC-----CceeEEECCCCCEEEEECC-----------CCEEEEEcCCCcc
Confidence 2222 2689999999998888665 4899999987554
No 201
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.69 E-value=4.1e-14 Score=148.61 Aligned_cols=258 Identities=12% Similarity=0.047 Sum_probs=182.3
Q ss_pred eeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCC--CCeEEEEec-CCcEEEEEEc--
Q 016446 76 RSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK--NYTMLYSIS-DKHVQEIKIS-- 150 (389)
Q Consensus 76 ~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~--~g~~l~tl~-~~~V~~vafS-- 150 (389)
..+.++|..++++ +.....-..+..++|| |||++|..++.|++|.+||+. +++.+.++. +..-..++||
T Consensus 177 ~~V~viD~~t~~v-----~~~i~~g~~p~~v~~S-pDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~ 250 (567)
T 1qks_A 177 GQIALIDGSTYEI-----KTVLDTGYAVHISRLS-ASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKM 250 (567)
T ss_dssp TEEEEEETTTCCE-----EEEEECSSCEEEEEEC-TTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCS
T ss_pred CeEEEEECCCCeE-----EEEEeCCCCccceEEC-CCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccc
Confidence 7888999888886 2221222235579998 999999999999999999996 888888886 5677899999
Q ss_pred ---CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeec-----------CCceeEEEEEecCCCeEE-EEeCCCcEEEEEC
Q 016446 151 ---PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHL-----------LHRNKKVDFIEQFNEKLL-VKQENENLQILDV 215 (389)
Q Consensus 151 ---~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~-----------~~~~~~v~f~~~~~~~l~-~~s~D~tIklWd~ 215 (389)
+|+++++++.. +++|.++|..|++.++++.-. ..++..+.++ +++..++ +-.++++|.++|.
T Consensus 251 ~~pDGk~l~v~n~~--~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s-~~~~~~vv~~~~~g~v~~vd~ 327 (567)
T 1qks_A 251 EGWEDKYAIAGAYW--PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILAS-HYRPEFIVNVKETGKILLVDY 327 (567)
T ss_dssp TTCTTTEEEEEEEE--TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEEC-SSSSEEEEEETTTTEEEEEET
T ss_pred cCCCCCEEEEEEcc--CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEc-CCCCEEEEEecCCCeEEEEec
Confidence 58888887544 479999999999999988621 1145667776 4444444 4468899999999
Q ss_pred CCCeEEEE-cccCCCceEEEEEcCCCcEEEEEc--CCeEEEEeCC-CcEEEEecc-CcCCcCCCCeeEEEECCCCC-EEE
Q 016446 216 RNAELMEV-SRTEFMTPSAFIFLYENQLFLTFR--NRTVAVWNFR-GELVTSFED-HLLWHPDCNTNNIYITSDQD-LII 289 (389)
Q Consensus 216 ~tg~~~~~-l~gh~~~v~sv~fspdg~~laS~s--D~tIklWd~~-G~~l~tl~g-h~~~~~~~~v~sv~fSpdG~-~la 289 (389)
.+.+.+.+ -.........+.|+|||++|..+. +++|.++|.. ++++.++.- -..+++...++ .|+|++. ..+
T Consensus 328 ~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~--~~~p~~g~v~~ 405 (567)
T 1qks_A 328 TDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN--FVHPTFGPVWA 405 (567)
T ss_dssp TCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE--EEETTTEEEEE
T ss_pred CCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee--eECCCCCcEEE
Confidence 87643222 123344677899999999987664 8999999996 998887764 33344321122 3689854 445
Q ss_pred EEecCCCcccccCCCCCeEEEEeCCC-------CeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCC
Q 016446 290 SYCKAEPEDQWMEGSAGSINVSSILT-------GKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALED 362 (389)
Q Consensus 290 S~s~D~~~~~~~~s~D~tIklWd~~t-------g~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (389)
++.. .+++|-++|..+ -+.++++.+... .
T Consensus 406 t~~~----------g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~----------------------------------g 441 (567)
T 1qks_A 406 TSHM----------GDDSVALIGTDPEGHPDNAWKILDSFPALGG----------------------------------G 441 (567)
T ss_dssp EEBS----------SSSEEEEEECCTTTCTTTBTSEEEEEECSCS----------------------------------C
T ss_pred eCCC----------CCCeEEEecCCCCCCccccCEEEEEEecCCC----------------------------------C
Confidence 5422 247999999887 457777765421 1
Q ss_pred EEEEEECCCCCEEEEecC-------CCcEEEcc
Q 016446 363 ITSLFYDEERNEIYTGNR-------HGLVHVWS 388 (389)
Q Consensus 363 V~svafSpdg~~LaSgs~-------D~tIrlW~ 388 (389)
=.-+.++|||+.|+.... .++|.+.|
T Consensus 442 ~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d 474 (567)
T 1qks_A 442 SLFIKTHPNSQYLYVDATLNPEAEISGSVAVFD 474 (567)
T ss_dssp CCCEECCTTCSEEEEECTTCSSHHHHTCEEEEE
T ss_pred CEEEEeCCCCCeEEEecCCCCCcccCceEEEEE
Confidence 122678999999888663 35777765
No 202
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.68 E-value=2.3e-13 Score=135.21 Aligned_cols=277 Identities=6% Similarity=-0.081 Sum_probs=183.0
Q ss_pred ccEEEEEec--Cc---eEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEe------ecCCCcceeeeeeeEe
Q 016446 13 RDIVFALAH--SG---VCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVY------ASDNFSSLKCRSTKIE 81 (389)
Q Consensus 13 ~~~~a~~~~--~g---tiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~------~~~d~~~l~~~~~~l~ 81 (389)
+..+.+... .. +|.++|..+++.+.++.... .. .++|||||+.|..+..+ +..+ ..+.++
T Consensus 32 ~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~-~p--~i~~spDg~~lyv~n~~~~~~~rg~~~------~~v~vi 102 (373)
T 2mad_H 32 GRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGF-LP--NPVAAHSGSEFALASTSFSRIAKGKRT------DYVEVF 102 (373)
T ss_pred CCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCC-CC--CeEECCCCCEEEEEeccccccccCCCC------CeEEEE
Confidence 555555543 22 89999999999999988753 44 99999999999886532 1123 467778
Q ss_pred EeccCCCCCcceeE--e-eecccCceeEEEecCCCeEEEEecC--CCeEEEEeCCCCeEEEE-ecCCcEEEEEEc-CCce
Q 016446 82 YIRRGKPDSGFALF--E-SESLKWPGFVEFDDVNGKVLTYSAQ--DSIYKVFDLKNYTMLYS-ISDKHVQEIKIS-PGIM 154 (389)
Q Consensus 82 ~i~~g~~~~~~~l~--~-~~~~~~~~~v~Fs~pdG~~Las~s~--D~tiklWdl~~g~~l~t-l~~~~V~~vafS-~g~~ 154 (389)
|..+++......+- . ......|..++|| |||++|..+.. +.+|-++| ++++.+.+ +.-.. ++.+. ++..
T Consensus 103 D~~t~~~~~~i~~~~~~~~~~g~~p~~~~~s-pDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~--~~~~~~~~~~ 178 (373)
T 2mad_H 103 DPVTFLPIADIELPDAPRFDVGPYSWMNANT-PNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT--CYHIHPGAPS 178 (373)
T ss_pred ECCCCcEEEEEECCCccccccCCCccceEEC-CCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc--eEEEEeCCCc
Confidence 87776652211110 0 0012357789998 99999887764 58899999 99999888 75321 13444 3433
Q ss_pred EEEEecCCCCeeEEEEEcCCCeEEEEEe------ecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeE--EEEccc
Q 016446 155 LLIFNRSSSHVPLKILSIEDGTVLKVFY------HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAEL--MEVSRT 226 (389)
Q Consensus 155 la~~~~~s~d~tiklWd~~tG~~l~tl~------~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~--~~~l~g 226 (389)
...+ ...|+++..+|. +|+...... +.........|. ++++.++..+.++++.+.|+.++.. +..+.-
T Consensus 179 ~~~~--~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~ 254 (373)
T 2mad_H 179 TFYL--LCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQA-NKSGRIVWPVYSGKILQADISAAGATNKAPIDA 254 (373)
T ss_pred eEEE--EcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeE-ecCCEEEEEcCCceEEEEeccCCcceEeeeeee
Confidence 3232 234678999999 888874432 110111233455 4556666656788999999976532 222211
Q ss_pred ----------CCCceEEEEEcCCCcEEEEEc-----------CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCC
Q 016446 227 ----------EFMTPSAFIFLYENQLFLTFR-----------NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSD 284 (389)
Q Consensus 227 ----------h~~~v~sv~fspdg~~laS~s-----------D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpd 284 (389)
.......++|+|||+.|-.+. .++|-+.|.. ++.++++..-.. .+.++||||
T Consensus 255 ~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~------p~~i~~s~D 328 (373)
T 2mad_H 255 LSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHD------VDAISVAQD 328 (373)
T ss_pred cCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCC------cCeEEECCC
Confidence 112244478999988665543 2479999997 899888864332 379999999
Q ss_pred CC-EEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEe
Q 016446 285 QD-LIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 322 (389)
Q Consensus 285 G~-~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl 322 (389)
|+ +|.++... +++|.++|+.+++.++++
T Consensus 329 g~~~l~v~~~~----------~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 329 GGPDLYALSAG----------TEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCeEEEEEcCC----------CCeEEEEECCCCCEEeee
Confidence 99 77776532 489999999999999885
No 203
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.68 E-value=9.1e-14 Score=131.94 Aligned_cols=221 Identities=11% Similarity=0.121 Sum_probs=156.6
Q ss_pred ceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEE
Q 016446 103 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVF 181 (389)
Q Consensus 103 ~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl 181 (389)
.....|++.++.++.+...+++|..||..+++....-....+.+++|+ +|.++ ++. +..|.+||.++|+.....
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~-v~~----~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYV-ATI----GTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEE-EEE----TTEEEEEETTTTEEEEEE
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEE-EEE----CCeEEEEECCCCcEEEEE
Confidence 357899844678888888999999999988875322235789999999 56644 443 247999999998865433
Q ss_pred eec----CCceeEEEEEecCCCeEEEEeC---------CCcEEEEECCC-CeEEEEcccCCCceEEEEEcCCCcEE-EEE
Q 016446 182 YHL----LHRNKKVDFIEQFNEKLLVKQE---------NENLQILDVRN-AELMEVSRTEFMTPSAFIFLYENQLF-LTF 246 (389)
Q Consensus 182 ~~~----~~~~~~v~f~~~~~~~l~~~s~---------D~tIklWd~~t-g~~~~~l~gh~~~v~sv~fspdg~~l-aS~ 246 (389)
... ....+.+++. +++..+++... ....+||.+.. |+... +..+....+.++|+|||+.| ++.
T Consensus 90 ~~~~~~~~~~~~di~~d-~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv~~ 167 (297)
T 3g4e_A 90 TVDNDKKNNRFNDGKVD-PAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYYID 167 (297)
T ss_dssp ECCTTCSSEEEEEEEEC-TTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEEEE
T ss_pred ecCCCCCCCCCCCEEEC-CCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEEEec
Confidence 321 1235778886 55654444322 24567776653 44433 34455678899999999865 555
Q ss_pred c-CCeEEEEeC--C-CcE-----EEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCe
Q 016446 247 R-NRTVAVWNF--R-GEL-----VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGK 317 (389)
Q Consensus 247 s-D~tIklWd~--~-G~~-----l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~ 317 (389)
+ ++.|..|++ . |++ +..+..+... ...++++|||++.++.... +.|..||..+|+
T Consensus 168 ~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~-----p~g~~~d~~G~lwva~~~~-----------~~v~~~d~~tG~ 231 (297)
T 3g4e_A 168 SLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQI-----PDGMCIDAEGKLWVACYNG-----------GRVIRLDPVTGK 231 (297)
T ss_dssp GGGTEEEEEEECTTTCCEEEEEEEEECCGGGCE-----EEEEEEBTTSCEEEEEETT-----------TEEEEECTTTCC
T ss_pred CCCCcEEEEeccCCCCcccCcEEEEECCCCCCC-----CCeeEECCCCCEEEEEcCC-----------CEEEEEcCCCce
Confidence 6 899999986 3 654 2333333222 5789999999988886543 789999998999
Q ss_pred EEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEEC-CCCCEEEEecC
Q 016446 318 CLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYD-EERNEIYTGNR 380 (389)
Q Consensus 318 ~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafS-pdg~~LaSgs~ 380 (389)
++.++..+. ..+++++|+ ||+++|+-++.
T Consensus 232 ~~~~i~~p~----------------------------------~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 232 RLQTVKLPV----------------------------------DKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEEECSS----------------------------------SBEEEEEEESGGGCEEEEEEB
T ss_pred EEEEEECCC----------------------------------CCceEEEEeCCCCCEEEEEcC
Confidence 999998775 479999999 99998876654
No 204
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.66 E-value=3.6e-14 Score=151.06 Aligned_cols=254 Identities=12% Similarity=0.072 Sum_probs=176.6
Q ss_pred cceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCC
Q 016446 44 DEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDS 123 (389)
Q Consensus 44 ~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~ 123 (389)
...+.+++|||||+.||.++..++.+ -.+++++|+.+|+.... .+. .. -..+++|+ ||+.|+.++.|.
T Consensus 128 ~~~l~~~~~SpDg~~lAy~~~~~G~~-----~~~i~v~dl~tg~~~~~--~~~-~~--k~~~~~Ws--Dg~~l~y~~~~~ 195 (693)
T 3iuj_A 128 TTALDQLSFSRDGRILAYSLSLAGSD-----WREIHLMDVESKQPLET--PLK-DV--KFSGISWL--GNEGFFYSSYDK 195 (693)
T ss_dssp CCEEEEEEECTTSSEEEEEEECSSCC-----EEEEEEEETTTCSEEEE--EEE-EE--ESCCCEEE--TTTEEEEEESSC
T ss_pred cEEEEEEEECCCCCEEEEEEecCCCc-----eEEEEEEECCCCCCCcc--ccC-Cc--eeccEEEe--CCCEEEEEEecC
Confidence 35789999999999999766554443 16889999999985111 111 11 01358996 899999998885
Q ss_pred e-------------EEEEeCCCCe----EEEEecC---CcEEEEEEc-CCceEEEEecCC-CCeeEEEEEcCCCe-EEEE
Q 016446 124 I-------------YKVFDLKNYT----MLYSISD---KHVQEIKIS-PGIMLLIFNRSS-SHVPLKILSIEDGT-VLKV 180 (389)
Q Consensus 124 t-------------iklWdl~~g~----~l~tl~~---~~V~~vafS-~g~~la~~~~~s-~d~tiklWd~~tG~-~l~t 180 (389)
+ |++|++.+++ +++.... ..+.++++| +|++|+.+...+ ....|.+||+.+++ .++.
T Consensus 196 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~ 275 (693)
T 3iuj_A 196 PDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLT 275 (693)
T ss_dssp CC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEE
T ss_pred cccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEE
Confidence 4 9999998765 3444433 257899999 688886655433 34589999998874 5667
Q ss_pred EeecCCceeEEEEEecCCCeEEEEe-C---CCcEEEEECCCCeE--EEEcccCCCceEEEEEcCCCcEEEEEc--CC--e
Q 016446 181 FYHLLHRNKKVDFIEQFNEKLLVKQ-E---NENLQILDVRNAEL--MEVSRTEFMTPSAFIFLYENQLFLTFR--NR--T 250 (389)
Q Consensus 181 l~~~~~~~~~v~f~~~~~~~l~~~s-~---D~tIklWd~~tg~~--~~~l~gh~~~v~sv~fspdg~~laS~s--D~--t 250 (389)
+..+....... +. ++++.++..+ . ...|..+|+.++++ .+.+..|...+. .|+|+|+.|+... |+ .
T Consensus 276 l~~~~~~~~~~-~~-~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~ 351 (693)
T 3iuj_A 276 VQGDLDADVSL-VD-NKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATAR 351 (693)
T ss_dssp EECSSSSCEEE-EE-EETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEE
T ss_pred EeCCCCceEEE-Ee-ccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeE
Confidence 77655555554 44 5677777654 3 36899999998876 455666766665 8999999888775 55 7
Q ss_pred EEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCC
Q 016446 251 VAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 325 (389)
Q Consensus 251 IklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH 325 (389)
|++||++|...+.+.-... ..+..+.++||++.|+....+ ...-++|..||+.+|+. ..|...
T Consensus 352 l~~~d~~g~~~~~l~~p~~----~~~~~~~~~~d~~~l~~~~ss-------~~tP~~l~~~d~~~g~~-~~l~~~ 414 (693)
T 3iuj_A 352 VEQFDYEGKRVREVALPGL----GSVSGFNGKHDDPALYFGFEN-------YAQPPTLYRFEPKSGAI-SLYRAS 414 (693)
T ss_dssp EEEECTTSCEEEEECCSSS----SEEEECCCCTTCSCEEEEEEC-------SSSCCEEEEECTTTCCE-EEEECC
T ss_pred EEEEECCCCeeEEeecCCC----ceEEeeecCCCCCEEEEEecC-------CCCCCEEEEEECCCCeE-EEEEeC
Confidence 8999998776666652211 126788889999877765432 12347999999988874 455543
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.65 E-value=1.6e-12 Score=120.18 Aligned_cols=261 Identities=10% Similarity=0.054 Sum_probs=181.8
Q ss_pred ceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEe-eecccCceeEEEecCCCeEEEEecCCC
Q 016446 45 EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDS 123 (389)
Q Consensus 45 ~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~-~~~~~~~~~v~Fs~pdG~~Las~s~D~ 123 (389)
...++|++.|+|+..++ ...+ ..+..++.. |++. .+. ......|..++++ ++|++.++...++
T Consensus 20 ~~p~~i~~d~~g~l~v~----~~~~------~~v~~~~~~-~~~~----~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~ 83 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFT----QHKA------NKISSLDQS-GRIK----EFEVPTPDAKVMCLIVS-SLGDIWFTENGAN 83 (300)
T ss_dssp CCEEEEEECTTSCEEEE----ETTT------TEEEEECTT-SCEE----EEECSSTTCCEEEEEEC-TTSCEEEEETTTT
T ss_pred CCcceeeECCCCCEEEE----cCCC------CeEEEECCC-CceE----EEECCCCCCcceeEEEC-CCCCEEEEecCCC
Confidence 57899999999997766 2233 455566644 5531 121 1223567889998 8999998887789
Q ss_pred eEEEEeCCCCeEE-EEec--CCcEEEEEEcC-CceEEEEecCCCCeeEEEEEcCCCeEEEE-EeecCCceeEEEEEecCC
Q 016446 124 IYKVFDLKNYTML-YSIS--DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKV-FYHLLHRNKKVDFIEQFN 198 (389)
Q Consensus 124 tiklWdl~~g~~l-~tl~--~~~V~~vafS~-g~~la~~~~~s~d~tiklWd~~tG~~l~t-l~~~~~~~~~v~f~~~~~ 198 (389)
.|..+|.. ++.. ..+. ...+.++++.+ |.+.+ +.. .++.|..+|.. |+.... +.........+++. +++
T Consensus 84 ~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v-~~~--~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d-~~g 157 (300)
T 2qc5_A 84 KIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWF-TQL--NGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLG-SDN 157 (300)
T ss_dssp EEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEE-EET--TTTEEEEECTT-SCEEEEECSSTTCCEEEEEEC-TTS
T ss_pred eEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEE-Ecc--CCCeEEEECCC-CCEEEccCCCCCCCceeEEEC-CCC
Confidence 99999987 7653 3333 35799999995 55554 432 23689999987 776632 23234556778876 555
Q ss_pred CeEEEEeCCCcEEEEECCCCeEEEE-cccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCCCcEEEE-eccCcCCcCCCC
Q 016446 199 EKLLVKQENENLQILDVRNAELMEV-SRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGELVTS-FEDHLLWHPDCN 275 (389)
Q Consensus 199 ~~l~~~s~D~tIklWd~~tg~~~~~-l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~G~~l~t-l~gh~~~~~~~~ 275 (389)
...++...++.|..+|. +|+.... +..+...+..+++.|+|++.++.. .+.|..+|.+|+.... +..+.. .
T Consensus 158 ~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~-----~ 231 (300)
T 2qc5_A 158 ALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGEISEYDIPTPNA-----R 231 (300)
T ss_dssp SEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTC-----C
T ss_pred CEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCCcEEEEECCCCCC-----C
Confidence 54444556889999999 7776553 335566899999999999999887 7899999998776543 332222 2
Q ss_pred eeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEE-ecCCCCCCCcccccCCCCCCCccccccccceec
Q 016446 276 TNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAK-INATNCSPKVDDELGSSSTGKSKKLNKSSYIRS 354 (389)
Q Consensus 276 v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~t-l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (389)
+.+++++|+|++.++... ++.|..+|. +|+.... +..+.
T Consensus 232 ~~~i~~d~~g~l~v~~~~-----------~~~i~~~~~-~g~~~~~~~~~~~---------------------------- 271 (300)
T 2qc5_A 232 PHAITAGKNSEIWFTEWG-----------ANQIGRITN-DNTIQEYQLQTEN---------------------------- 271 (300)
T ss_dssp EEEEEECSTTCEEEEETT-----------TTEEEEECT-TSCEEEEECCSTT----------------------------
T ss_pred ceEEEECCCCCEEEeccC-----------CCeEEEECC-CCcEEEEECCccC----------------------------
Confidence 689999999998887533 379999997 5765422 22111
Q ss_pred ccccccCCEEEEEECCCCCEEEEec
Q 016446 355 TVGEALEDITSLFYDEERNEIYTGN 379 (389)
Q Consensus 355 ~~~~~~~~V~svafSpdg~~LaSgs 379 (389)
..+.+++++|+|+++++..
T Consensus 272 ------~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 272 ------AEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp ------CCCCCEEECTTSCEEEECS
T ss_pred ------CccceeEeCCCCCEEEEcc
Confidence 3678899999999888776
No 206
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.64 E-value=7.9e-13 Score=131.35 Aligned_cols=283 Identities=8% Similarity=0.034 Sum_probs=182.5
Q ss_pred EEEeeCCCEEEEEEEee-cCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEec--------
Q 016446 50 LFYNKNNDSLITVSVYA-SDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA-------- 120 (389)
Q Consensus 50 v~~spdg~~l~s~s~~~-~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s-------- 120 (389)
+...|+++.+..+. . +.+ .+. .+.++|..++++. -+...-..+ .++|| |||+.|..+.
T Consensus 26 ~~~~~~~~~~yv~~--~~~~~--~~~--~v~v~D~~t~~~~-----~~i~~g~~p-~i~~s-pDg~~lyv~n~~~~~~~r 92 (373)
T 2mad_H 26 EAPGADGRRSYINL--PAHHS--AII--QQWVLDAGSGSIL-----GHVNGGFLP-NPVAA-HSGSEFALASTSFSRIAK 92 (373)
T ss_pred ccCCCCCCEEEEeC--CcccC--Ccc--EEEEEECCCCeEE-----EEecCCCCC-CeEEC-CCCCEEEEEecccccccc
Confidence 34568887655532 2 222 221 7788888888762 111111224 79998 9999888775
Q ss_pred --CCCeEEEEeCCCCeEEEEec-C--------CcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEE-EeecCCc
Q 016446 121 --QDSIYKVFDLKNYTMLYSIS-D--------KHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKV-FYHLLHR 187 (389)
Q Consensus 121 --~D~tiklWdl~~g~~l~tl~-~--------~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~t-l~~~~~~ 187 (389)
.+++|.++|+.+++.+.++. . ..-..++|| +|++|++++.. .+.+|.++| ++|+.+.+ +... +
T Consensus 93 g~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~-~~~~v~viD-~t~~~~~~~i~~~-~- 168 (373)
T 2mad_H 93 GKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA-AGPAVGLVV-QGGSSDDQLLSSP-T- 168 (373)
T ss_pred CCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC-CCCeEEEEE-CCCCEEeEEcCCC-c-
Confidence 37899999999998887764 2 234589999 68888877532 136899999 99999988 6521 1
Q ss_pred eeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcc------cCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-C-
Q 016446 188 NKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR------TEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-G- 258 (389)
Q Consensus 188 ~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~------gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G- 258 (389)
.+.+.+..+..+++.+.|+++..+|. +|+...... +.........|.+++..++-.+ .+++-+.|+. +
T Consensus 169 --~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~ 245 (373)
T 2mad_H 169 --CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAG 245 (373)
T ss_pred --eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCc
Confidence 24454333345556679999999999 888764321 1111122345677665544444 7889899986 3
Q ss_pred -cEEEEeccC------cCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCc
Q 016446 259 -ELVTSFEDH------LLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKV 331 (389)
Q Consensus 259 -~~l~tl~gh------~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~ 331 (389)
+.+.+++-. ..+.+.. ...++|+|||+.|..+.....+.. -....++|-+.|+.+++.++++..-
T Consensus 246 ~~v~~~~~~~~~~~~~~~~~p~g-~~~~~~s~d~~~lyV~~~~~~~~~-~~~~~~~V~VID~~t~~vv~~i~~g------ 317 (373)
T 2mad_H 246 ATNKAPIDALSGGRKADTWRPGG-WQQVAYLKSSDGIYLLTSEQSAWK-LHAAAKEVTSVTGLVGQTSSQISLG------ 317 (373)
T ss_pred ceEeeeeeecCCcccccceecCc-eEeEEECCCCCEEEEEeccCCccc-ccCCCCeEEEEECCCCEEEEEEECC------
Confidence 233343211 1111111 345899999998777543100000 0001368999999999999999542
Q ss_pred ccccCCCCCCCccccccccceecccccccCCEEEEEECCCCC-EEEEec-CCCcEEEccC
Q 016446 332 DDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERN-EIYTGN-RHGLVHVWSN 389 (389)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~-~LaSgs-~D~tIrlW~~ 389 (389)
...++++|||||+ .|+++. .+++|.++|.
T Consensus 318 -----------------------------~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 318 -----------------------------HDVDAISVAQDGGPDLYALSAGTEVLHIYDA 348 (373)
T ss_pred -----------------------------CCcCeEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 2578899999999 899988 5999999873
No 207
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.64 E-value=1e-14 Score=155.34 Aligned_cols=233 Identities=9% Similarity=0.083 Sum_probs=161.8
Q ss_pred ceeEEEecCCCeEEE-----EecCCCeEEEEeCCCCeEEEE-ecCCcEEEEEEcCCceEEEEecCC----------CCee
Q 016446 103 PGFVEFDDVNGKVLT-----YSAQDSIYKVFDLKNYTMLYS-ISDKHVQEIKISPGIMLLIFNRSS----------SHVP 166 (389)
Q Consensus 103 ~~~v~Fs~pdG~~La-----s~s~D~tiklWdl~~g~~l~t-l~~~~V~~vafS~g~~la~~~~~s----------~d~t 166 (389)
+..++|| |||++|| +|+.+.+|++||+++|+.+.. +......+++||||+.|+.++.+. ....
T Consensus 131 l~~~~~S-pDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~ 209 (693)
T 3iuj_A 131 LDQLSFS-RDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWLGNEGFFYSSYDKPDGSELSARTDQHK 209 (693)
T ss_dssp EEEEEEC-TTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEETTTEEEEEESSCCC-------CCCCE
T ss_pred EEEEEEC-CCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEeCCCEEEEEEecCcccccccccCCCcE
Confidence 4568998 9999999 455567999999999996542 322223577888888888876552 2246
Q ss_pred EEEEEcCCCe----EEEEEee-cCCceeEEEEEecCCCeEEEEe----CCCcEEEEECCCCe-EEEEcccCCCceEEEEE
Q 016446 167 LKILSIEDGT----VLKVFYH-LLHRNKKVDFIEQFNEKLLVKQ----ENENLQILDVRNAE-LMEVSRTEFMTPSAFIF 236 (389)
Q Consensus 167 iklWd~~tG~----~l~tl~~-~~~~~~~v~f~~~~~~~l~~~s----~D~tIklWd~~tg~-~~~~l~gh~~~v~sv~f 236 (389)
|++|++.+++ ++...+. |.....++.++ |++.+|+... .+..|.+||+.+++ ..+.+..+.........
T Consensus 210 v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~S-pDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~ 288 (693)
T 3iuj_A 210 VYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVT-EDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLVD 288 (693)
T ss_dssp EEEEETTSCGGGCEEEESCSGGGCCSEEEEEEC-TTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEEE
T ss_pred EEEEECCCCcccceEEEecCCCCCeEEEEEEEc-CCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEEe
Confidence 9999998876 3433333 33346788887 7888887643 33689999998874 45666777777777744
Q ss_pred cCCCcEEEEEc-C---CeEEEEeCC-CcE--EEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCC--e
Q 016446 237 LYENQLFLTFR-N---RTVAVWNFR-GEL--VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAG--S 307 (389)
Q Consensus 237 spdg~~laS~s-D---~tIklWd~~-G~~--l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~--t 307 (389)
++++++++... | +.|..+|++ +++ .++|..|... +. .|+|+|++|+..+.+ ++ .
T Consensus 289 ~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-----~~--~~s~~g~~lv~~~~~----------~g~~~ 351 (693)
T 3iuj_A 289 NKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ-----VL--TVHSGSGYLFAEYMV----------DATAR 351 (693)
T ss_dssp EETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS-----CE--EEEEETTEEEEEEEE----------TTEEE
T ss_pred ccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC-----EE--EEEEECCEEEEEEEE----------CCeeE
Confidence 55566666665 4 578899997 554 4677777654 33 899999999987764 23 7
Q ss_pred EEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCC----Cc
Q 016446 308 INVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRH----GL 383 (389)
Q Consensus 308 IklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D----~t 383 (389)
|++||+. |+....+.-... ..|..++++||++.|+-...+ ++
T Consensus 352 l~~~d~~-g~~~~~l~~p~~---------------------------------~~~~~~~~~~d~~~l~~~~ss~~tP~~ 397 (693)
T 3iuj_A 352 VEQFDYE-GKRVREVALPGL---------------------------------GSVSGFNGKHDDPALYFGFENYAQPPT 397 (693)
T ss_dssp EEEECTT-SCEEEEECCSSS---------------------------------SEEEECCCCTTCSCEEEEEECSSSCCE
T ss_pred EEEEECC-CCeeEEeecCCC---------------------------------ceEEeeecCCCCCEEEEEecCCCCCCE
Confidence 9999987 555555542210 257778888999877766544 67
Q ss_pred EEEcc
Q 016446 384 VHVWS 388 (389)
Q Consensus 384 IrlW~ 388 (389)
|..||
T Consensus 398 l~~~d 402 (693)
T 3iuj_A 398 LYRFE 402 (693)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 77665
No 208
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.63 E-value=3.5e-13 Score=135.52 Aligned_cols=287 Identities=12% Similarity=0.098 Sum_probs=186.0
Q ss_pred ccEEEEEec-----CceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCC
Q 016446 13 RDIVFALAH-----SGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGK 87 (389)
Q Consensus 13 ~~~~a~~~~-----~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~ 87 (389)
+..+.+... +++|.+.|..|++.+.++.... .. . +++||||++|..++.+.+.....=.-..+.++|..+++
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~-~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~ 120 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGF-LP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL 120 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECS-SC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCC-CC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe
Confidence 555666554 6899999999999999999765 55 4 99999999987766432110000001578899988887
Q ss_pred CCCcceeEe---eecccCceeEEEecCCCeEEEEec--CCCeEEEEeCCCCeEEEEecCCcEEEEEEc-CCceEEEEecC
Q 016446 88 PDSGFALFE---SESLKWPGFVEFDDVNGKVLTYSA--QDSIYKVFDLKNYTMLYSISDKHVQEIKIS-PGIMLLIFNRS 161 (389)
Q Consensus 88 ~~~~~~l~~---~~~~~~~~~v~Fs~pdG~~Las~s--~D~tiklWdl~~g~~l~tl~~~~V~~vafS-~g~~la~~~~~ 161 (389)
......+-. .....+|..++|+ |||++|..+. .+++|.++|+++++.+.++.-... ...+. ....+++.+.
T Consensus 121 v~~~I~v~~g~r~~~g~~P~~~a~s-pDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-~~~~P~g~~~~~~~~~- 197 (386)
T 3sjl_D 121 PTADIELPDAPRFLVGTYPWMTSLT-PDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-YHIFPTAPDTFFMHCR- 197 (386)
T ss_dssp EEEEEEETTCCCCCBSCCGGGEEEC-TTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-EEEEEEETTEEEEEET-
T ss_pred EEEEEECCCccccccCCCCceEEEc-CCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-ceeecCCCceeEEECC-
Confidence 622111100 0011257789998 9999776654 378999999999999988863222 22233 2333433322
Q ss_pred CCCeeEEEEEcCC-CeEEEEEeecC----Cce-eEEEEEecCCCeEEEEeCCCcEEEEECCCCeE--EEEcc--------
Q 016446 162 SSHVPLKILSIED-GTVLKVFYHLL----HRN-KKVDFIEQFNEKLLVKQENENLQILDVRNAEL--MEVSR-------- 225 (389)
Q Consensus 162 s~d~tiklWd~~t-G~~l~tl~~~~----~~~-~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~--~~~l~-------- 225 (389)
|+++-..++.+ |+...+...+. .++ ...+|..+ +++++..+.+++|.+.|+.++.. ++.+.
T Consensus 198 --DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~-dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~ 274 (386)
T 3sjl_D 198 --DGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK-AGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERA 274 (386)
T ss_dssp --TSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETT-TTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHH
T ss_pred --CCCEEEEECCCCCeEEEeecceeccccccccccceeEcC-CCcEEEEeCCCEEEEEECCCCcceeecceecccccccc
Confidence 45666677765 66644332121 111 22466533 45777777899999999976642 22211
Q ss_pred -c-CCCceEEEEEcCCCcEEEEEc-C----------CeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCC-EEEE
Q 016446 226 -T-EFMTPSAFIFLYENQLFLTFR-N----------RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD-LIIS 290 (389)
Q Consensus 226 -g-h~~~v~sv~fspdg~~laS~s-D----------~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~-~laS 290 (389)
+ .......++++|++++|--.. + ++|-+-|+. ++.++++.--.. +++++|||||+ +|.+
T Consensus 275 ~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~------~~~lavs~D~~~~ly~ 348 (386)
T 3sjl_D 275 DGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHE------IDSINVSQDEKPLLYA 348 (386)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE------ECEEEECSSSSCEEEE
T ss_pred ccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCC------cceEEECCCCCeEEEE
Confidence 0 111233478899888776653 1 468888986 999888763221 58999999998 7766
Q ss_pred EecCCCcccccCCCCCeEEEEeCCCCeEEEEecC
Q 016446 291 YCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 324 (389)
Q Consensus 291 ~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~g 324 (389)
... .+++|-+.|..+++.++++..
T Consensus 349 tn~----------~~~~VsViD~~t~k~~~~i~~ 372 (386)
T 3sjl_D 349 LST----------GDKTLYIHDAESGEELRSVNQ 372 (386)
T ss_dssp EET----------TTTEEEEEETTTCCEEEEECC
T ss_pred EcC----------CCCeEEEEECCCCcEEEEecC
Confidence 543 258999999999999999854
No 209
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.60 E-value=7.4e-12 Score=115.64 Aligned_cols=228 Identities=13% Similarity=0.072 Sum_probs=165.4
Q ss_pred cCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEE-Eec--CCcEEEEEEcC-CceEEEEecCCCCeeEEEEEcCCCe
Q 016446 101 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY-SIS--DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGT 176 (389)
Q Consensus 101 ~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~-tl~--~~~V~~vafS~-g~~la~~~~~s~d~tiklWd~~tG~ 176 (389)
..|.+++++ ++|++.++...++.|.+||.. ++... .+. ...+.++++.+ |... .+. ..++.|..+|.. |+
T Consensus 20 ~~p~~i~~d-~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~-v~~--~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 20 SGPYGITSS-EDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIW-FTE--NGANKIGKLSKK-GG 93 (300)
T ss_dssp CCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEE-EEE--TTTTEEEEECTT-SC
T ss_pred CCcceeeEC-CCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEE-EEe--cCCCeEEEECCC-CC
Confidence 356789998 899999988889999999987 76443 333 25799999995 5544 443 223689999987 77
Q ss_pred EEEEEe--ecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEE-cccCCCceEEEEEcCCCcEEEEEc-CCeEE
Q 016446 177 VLKVFY--HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEV-SRTEFMTPSAFIFLYENQLFLTFR-NRTVA 252 (389)
Q Consensus 177 ~l~tl~--~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~-l~gh~~~v~sv~fspdg~~laS~s-D~tIk 252 (389)
.. .+. ........+++. +++..+++...++.|..+|.. |+.... +......+..+++.|+|++.++.. ++.|.
T Consensus 94 ~~-~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 94 FT-EYPLPQPDSGPYGITEG-LNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIG 170 (300)
T ss_dssp EE-EEECSSTTCCEEEEEEC-STTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred eE-EecCCCCCCCCccceEC-CCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEE
Confidence 64 333 233556788876 455555555568899999997 776543 444566899999999999988887 88999
Q ss_pred EEeCCCcEEEE-eccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEE-ecCCCCCCC
Q 016446 253 VWNFRGELVTS-FEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAK-INATNCSPK 330 (389)
Q Consensus 253 lWd~~G~~l~t-l~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~t-l~gH~~~~~ 330 (389)
.+|.+|+.... +..+.. .+..++++|+|++.++... .+.|..+|. +|+.... +..+.
T Consensus 171 ~~~~~g~~~~~~~~~~~~-----~~~~i~~d~~g~l~v~~~~-----------~~~i~~~~~-~g~~~~~~~~~~~---- 229 (300)
T 2qc5_A 171 RITNTGKLEEYPLPTNAA-----APVGITSGNDGALWFVEIM-----------GNKIGRITT-TGEISEYDIPTPN---- 229 (300)
T ss_dssp EECTTCCEEEEECSSTTC-----CEEEEEECTTSSEEEEETT-----------TTEEEEECT-TCCEEEEECSSTT----
T ss_pred EECCCCcEEEeeCCCCCC-----CcceEEECCCCCEEEEccC-----------CCEEEEEcC-CCcEEEEECCCCC----
Confidence 99998776542 222222 2689999999998887543 368999997 6775543 22221
Q ss_pred cccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEcc
Q 016446 331 VDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
..+.+++++|+|+..++...++.|..++
T Consensus 230 ------------------------------~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 230 ------------------------------ARPHAITAGKNSEIWFTEWGANQIGRIT 257 (300)
T ss_dssp ------------------------------CCEEEEEECSTTCEEEEETTTTEEEEEC
T ss_pred ------------------------------CCceEEEECCCCCEEEeccCCCeEEEEC
Confidence 4788999999999888887788888775
No 210
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.58 E-value=3.5e-12 Score=123.10 Aligned_cols=219 Identities=8% Similarity=0.001 Sum_probs=149.9
Q ss_pred ceeEEEecCC-CeEEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEE
Q 016446 103 PGFVEFDDVN-GKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKV 180 (389)
Q Consensus 103 ~~~v~Fs~pd-G~~Las~s~D~tiklWdl~~g~~l~tl~~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~t 180 (389)
+...+|+ |+ +.++.+...++.|..||.++++....-....|.+++++ +|.+++++ . ..|.+||..+|+....
T Consensus 51 ~egp~~~-~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~-~----~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 51 GEGPTFD-PASGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIAS-D----DGLFLRDTATGVLTLH 124 (326)
T ss_dssp EEEEEEE-TTTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEE-T----TEEEEEETTTCCEEEE
T ss_pred CcCCeEe-CCCCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEE-C----CCEEEEECCCCcEEEE
Confidence 3568998 65 67778888899999999988875422235689999999 56666543 2 2499999999886543
Q ss_pred Eeec----CCceeEEEEEecCCCeEEEEeC----CCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEE-EEEc-CCe
Q 016446 181 FYHL----LHRNKKVDFIEQFNEKLLVKQE----NENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLF-LTFR-NRT 250 (389)
Q Consensus 181 l~~~----~~~~~~v~f~~~~~~~l~~~s~----D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~l-aS~s-D~t 250 (389)
.... ...+..+++. +++..+++... ..+.+||.+.+|+.... ..+...+..++|+|||+.| ++.+ ++.
T Consensus 125 ~~~~~~~~~~~~~~i~~d-~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~~~-~~~~~~~~~i~~s~dg~~lyv~~~~~~~ 202 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMH-PSGALWIGTMGRKAETGAGSIYHVAKGKVTKL-FADISIPNSICFSPDGTTGYFVDTKVNR 202 (326)
T ss_dssp ECSSTTCTTEEEEEEEEC-TTSCEEEEEEETTCCTTCEEEEEEETTEEEEE-EEEESSEEEEEECTTSCEEEEEETTTCE
T ss_pred eeCCCCCCCCCCCCEEEC-CCCCEEEEeCCCcCCCCceEEEEEeCCcEEEe-eCCCcccCCeEEcCCCCEEEEEECCCCE
Confidence 2210 1246778886 55654444332 13455555546665443 3344567899999999865 4445 889
Q ss_pred EEEEeCC---C-c-----EEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEE
Q 016446 251 VAVWNFR---G-E-----LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAK 321 (389)
Q Consensus 251 IklWd~~---G-~-----~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~t 321 (389)
|.+||++ | + .+..+.++... ...+++++||++.++... ++.|..||. +|+.+..
T Consensus 203 I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~-----p~gi~~d~~G~lwva~~~-----------~~~v~~~d~-~g~~~~~ 265 (326)
T 2ghs_A 203 LMRVPLDARTGLPTGKAEVFIDSTGIKGG-----MDGSVCDAEGHIWNARWG-----------EGAVDRYDT-DGNHIAR 265 (326)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECTTSSSE-----EEEEEECTTSCEEEEEET-----------TTEEEEECT-TCCEEEE
T ss_pred EEEEEcccccCCcccCceEEEECCCCCCC-----CCeeEECCCCCEEEEEeC-----------CCEEEEECC-CCCEEEE
Confidence 9999973 6 3 23334332222 578999999998887643 378999997 7888888
Q ss_pred ecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEEC-CCCCEEEEecC
Q 016446 322 INATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYD-EERNEIYTGNR 380 (389)
Q Consensus 322 l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafS-pdg~~LaSgs~ 380 (389)
+..+. ..+++++|+ ||++.|+.++.
T Consensus 266 i~~~~----------------------------------~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 266 YEVPG----------------------------------KQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EECSC----------------------------------SBEEEEEEESTTSCEEEEEEB
T ss_pred EECCC----------------------------------CCcEEEEEecCCCCEEEEEec
Confidence 87665 479999999 99987755543
No 211
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.58 E-value=7.7e-13 Score=123.87 Aligned_cols=231 Identities=13% Similarity=0.114 Sum_probs=158.4
Q ss_pred EEEEEee--ccEEEE-------EecCceEEEEecccceeeeeeec----CCcceEEEEEEeeC-CCEEEEEEEeecCCCc
Q 016446 6 VIEIVAA--RDIVFA-------LAHSGVCAAFSRETNRRICFLNV----SPDEVIRSLFYNKN-NDSLITVSVYASDNFS 71 (389)
Q Consensus 6 v~~i~~~--~~~~a~-------~~~~gtiklW~~~tg~~l~tl~~----~~~~~v~sv~~spd-g~~l~s~s~~~~~d~~ 71 (389)
...+.+. +.+.++ ...++.|..|+..+|+... +.. .+...+.+++++|+ |+.+++. .+
T Consensus 20 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-----~~-- 91 (314)
T 1pjx_A 20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV-ICKPEVNGYGGIPAGCQCDRDANQLFVAD-----MR-- 91 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEE-EECCEETTEECCEEEEEECSSSSEEEEEE-----TT--
T ss_pred ccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE-EEecccCCCCCCCceEEEecCCCcEEEEE-----CC--
Confidence 4567776 666666 5788999999987787653 332 12357899999999 7755552 22
Q ss_pred ceeeeeeeEeEeccCCCCCccee-Ee---eecccCceeEEEecCCCeEEEEecCC---------------CeEEEEeCCC
Q 016446 72 SLKCRSTKIEYIRRGKPDSGFAL-FE---SESLKWPGFVEFDDVNGKVLTYSAQD---------------SIYKVFDLKN 132 (389)
Q Consensus 72 ~l~~~~~~l~~i~~g~~~~~~~l-~~---~~~~~~~~~v~Fs~pdG~~Las~s~D---------------~tiklWdl~~ 132 (389)
..+.+++.. |++. .+ .. ......+..++|+ |+|+++++...+ +.|..+|..
T Consensus 92 ----~~l~~~d~~-g~~~---~~~~~~~~~~~~~~~~~i~~d-~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~- 161 (314)
T 1pjx_A 92 ----LGLLVVQTD-GTFE---EIAKKDSEGRRMQGCNDCAFD-YEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD- 161 (314)
T ss_dssp ----TEEEEEETT-SCEE---ECCSBCTTSCBCBCCCEEEEC-TTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-
T ss_pred ----CCEEEEeCC-CCEE---EEEeccCCCccccCCcCEEEC-CCCCEEEEecCcccccccccccccCCCCeEEEECCC-
Confidence 245667766 6641 11 11 0122357789998 899998887655 566677765
Q ss_pred CeEEEEec-CCcEEEEEEc----CCc-eEEEEecCCCCeeEEEEEcC-CCe-----EEEEEeecC-CceeEEEEEecCCC
Q 016446 133 YTMLYSIS-DKHVQEIKIS----PGI-MLLIFNRSSSHVPLKILSIE-DGT-----VLKVFYHLL-HRNKKVDFIEQFNE 199 (389)
Q Consensus 133 g~~l~tl~-~~~V~~vafS----~g~-~la~~~~~s~d~tiklWd~~-tG~-----~l~tl~~~~-~~~~~v~f~~~~~~ 199 (389)
++...... ......++|+ |.+ .|..+. ..++.|.+||+. +|+ .+..+..+. .....+++. +++.
T Consensus 162 g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~--~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d-~~G~ 238 (314)
T 1pjx_A 162 GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAE--TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFD-EDNN 238 (314)
T ss_dssp SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEE--TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEB-TTCC
T ss_pred CCEEEeccCCCCcceEEEecccCCCCCEEEEEE--CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEEC-CCCC
Confidence 66543333 2457889999 754 565553 334789999986 665 333344333 456778876 5566
Q ss_pred eEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCc-EEEEEc-CCeEEEEeCC
Q 016446 200 KLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNFR 257 (389)
Q Consensus 200 ~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~-~laS~s-D~tIklWd~~ 257 (389)
.+++...++.|.+||.++|+.+..+..+...+.+++|+|||+ ++++.. ++.|..++++
T Consensus 239 l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 239 LLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred EEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 666666889999999998988888777878899999999999 566666 7899999985
No 212
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.56 E-value=5e-14 Score=136.81 Aligned_cols=233 Identities=11% Similarity=0.071 Sum_probs=153.9
Q ss_pred cCceeEEEecCCCeEEEEec--CCCeEEEEeCCCCeEEEEec---------CCcEEEEEEcCCceEEEEecCC---CCee
Q 016446 101 KWPGFVEFDDVNGKVLTYSA--QDSIYKVFDLKNYTMLYSIS---------DKHVQEIKISPGIMLLIFNRSS---SHVP 166 (389)
Q Consensus 101 ~~~~~v~Fs~pdG~~Las~s--~D~tiklWdl~~g~~l~tl~---------~~~V~~vafS~g~~la~~~~~s---~d~t 166 (389)
..|..|+|+ |||+++++.. .++.++||.+.+|++. .+. -..+.+|+|++.+.|....... .+..
T Consensus 17 ~~p~~va~~-~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLT-PDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEEC-TTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEEC-CCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 567889998 8999999864 2344888887667643 332 1479999999644455543220 1368
Q ss_pred EEEEEcCCCeEEEEEeec------CCceeEEEEEecCCCeEEEE-e---CCCcEEEEECCCCeEEEEcccCCCceE-EEE
Q 016446 167 LKILSIEDGTVLKVFYHL------LHRNKKVDFIEQFNEKLLVK-Q---ENENLQILDVRNAELMEVSRTEFMTPS-AFI 235 (389)
Q Consensus 167 iklWd~~tG~~l~tl~~~------~~~~~~v~f~~~~~~~l~~~-s---~D~tIklWd~~tg~~~~~l~gh~~~v~-sv~ 235 (389)
|.+||+.+|+.++++... ......+++. ++++.+.++ . .++.|.+||+.+|+..+++.+|..... .+.
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd-~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVD-LIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEE-TTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEe-cCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence 999999999999888632 1245889987 445555444 4 689999999999999888877643211 256
Q ss_pred EcCCCcEEEEEc-CCeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCC
Q 016446 236 FLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL 314 (389)
Q Consensus 236 fspdg~~laS~s-D~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~ 314 (389)
|+++|+.+.+.+ |++++.|.. . ++.++|||||++|..+..+ +. +||.+.
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~~------------~------~~gia~s~dg~~ly~~~~~-----------~~-~l~~~~ 223 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPHL------------G------VNGIVLDAENEWLYLSPMH-----------ST-SMYRIK 223 (343)
T ss_dssp CEETTEECBEECTTSCEECCCC------------C------EEEEEECTTSCEEEEEESS-----------CS-EEEEEE
T ss_pred eeECCEEEEeccCCCceeceec------------c------cceeEeccCCCEEEEEeCC-----------CC-eEEEEE
Confidence 788999888887 888877641 1 5899999999999887654 22 566553
Q ss_pred CCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEcc
Q 016446 315 TGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 315 tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
+... ...... ......... ..++......++++|||+++++...++.|.+|+
T Consensus 224 ~~~~----~~~~~~--------------~~~~~~~~~----~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d 275 (343)
T 2qe8_A 224 SADL----SNLQLT--------------DAELGSKIE----RYSEKPICDGISIDKDHNIYVGDLAHSAIGVIT 275 (343)
T ss_dssp HHHH----TCTTCC--------------HHHHHTTCE----EEEECCSCSCEEECTTCCEEEEEGGGTEEEEEE
T ss_pred HHHh----cCCCCC--------------hhhhhcceE----ecccCCCCceEEECCCCCEEEEccCCCeEEEEE
Confidence 2110 000000 000000000 000002345689999999999999999999997
No 213
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.55 E-value=6.7e-13 Score=133.44 Aligned_cols=288 Identities=11% Similarity=0.061 Sum_probs=188.7
Q ss_pred ceEEEEEEeeCCCEEEEEEEe-ecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEec---
Q 016446 45 EVIRSLFYNKNNDSLITVSVY-ASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA--- 120 (389)
Q Consensus 45 ~~v~sv~~spdg~~l~s~s~~-~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s--- 120 (389)
+..-.+...|||+.+-.+... ...+ ..+.+-|..++++. -+...-..|. ++|| |||++|..++
T Consensus 33 ~~~~~~~~~pd~~~vyV~~~~~~~~~------~~V~ViD~~t~~v~-----~~I~vG~~P~-va~s-pDG~~lyVan~~~ 99 (386)
T 3sjl_D 33 EPRILEAPAPDARRVYVNDPAHFAAV------TQQFVIDGEAGRVI-----GMIDGGFLPN-PVVA-DDGSFIAHASTVF 99 (386)
T ss_dssp CCCBCCCCCCCTTEEEEEECGGGCSS------EEEEEEETTTTEEE-----EEEEECSSCE-EEEC-TTSSCEEEEEEEE
T ss_pred ccceeeccCCCCCEEEEEcCcccCCC------CEEEEEECCCCeEE-----EEEECCCCCc-EEEC-CCCCEEEEEcccc
Confidence 344456778999987764321 0113 57777888887762 2212222344 9998 9999776554
Q ss_pred -------CCCeEEEEeCCCCeEEEEec-C--------CcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEee
Q 016446 121 -------QDSIYKVFDLKNYTMLYSIS-D--------KHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH 183 (389)
Q Consensus 121 -------~D~tiklWdl~~g~~l~tl~-~--------~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~ 183 (389)
.+++|.+||..+++.+.++. . ..-+.++|| ||++|.++... .+++|.++|+++++.++++.-
T Consensus 100 ~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~-~~~~VsVID~~t~~vv~tI~v 178 (386)
T 3sjl_D 100 SRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS-PAPAVGVVDLEGKAFKRMLDV 178 (386)
T ss_dssp EETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS-SSCEEEEEETTTTEEEEEEEC
T ss_pred cccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC-CCCeEEEEECCCCcEEEEEEC
Confidence 36789999999999888774 1 245679999 68888877432 247999999999999999973
Q ss_pred cCCceeEEEEEecCCCeEEEEeCCCcEEEEECCC-CeEEEEcccCCC----ceE-EEEE-cCCCcEEEEEcCCeEEEEeC
Q 016446 184 LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRN-AELMEVSRTEFM----TPS-AFIF-LYENQLFLTFRNRTVAVWNF 256 (389)
Q Consensus 184 ~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~t-g~~~~~l~gh~~----~v~-sv~f-spdg~~laS~sD~tIklWd~ 256 (389)
... ...+ +.....+++.+.||++-..++.+ ++...+...+.+ .+. ..+| .++|+++....+++|.+-|+
T Consensus 179 --~g~-~~~~-P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~ 254 (386)
T 3sjl_D 179 --PDC-YHIF-PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDL 254 (386)
T ss_dssp --CSE-EEEE-EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEEC
T ss_pred --CCc-ceee-cCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEEC
Confidence 222 2222 33456777788999999999986 676443222221 111 1355 48998766545899999999
Q ss_pred CCc---EEEEec---c---CcCCcCCCCeeEEEECCCCCEEEEEecCCC-cccccCCCCCeEEEEeCCCCeEEEEecCCC
Q 016446 257 RGE---LVTSFE---D---HLLWHPDCNTNNIYITSDQDLIISYCKAEP-EDQWMEGSAGSINVSSILTGKCLAKINATN 326 (389)
Q Consensus 257 ~G~---~l~tl~---g---h~~~~~~~~v~sv~fSpdG~~laS~s~D~~-~~~~~~s~D~tIklWd~~tg~~l~tl~gH~ 326 (389)
.++ .+..++ . -..|.+.. ...++++|++++|...-.+.. +.+ -...++|-+-|+.|++.++++.--
T Consensus 255 ~~~~~~v~~~~~~~~~~~~~~g~~p~g-~q~~a~~~~~~~lyV~~~~~~~~~h--k~~~~~V~viD~~t~kv~~~i~vg- 330 (386)
T 3sjl_D 255 SSGDAKFLPAVEALTEAERADGWRPGG-WQQVAYHRALDRIYLLVDQRDEWRH--KTASRFVVVLDAKTGERLAKFEMG- 330 (386)
T ss_dssp TTSSCEECCCEESSCHHHHHTTEEECS-SSCEEEETTTTEEEEEEEECCTTCT--TSCEEEEEEEETTTCCEEEEEEEE-
T ss_pred CCCcceeecceeccccccccccccCCC-cceeeECCCCCeEEEEecccccccc--CCCCCEEEEEECCCCeEEEEEECC-
Confidence 744 333322 0 01111111 246889999999887643100 000 001257999999999999998642
Q ss_pred CCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCC-EEEEec-CCCcEEEcc
Q 016446 327 CSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERN-EIYTGN-RHGLVHVWS 388 (389)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~-~LaSgs-~D~tIrlW~ 388 (389)
..+++|+|||||+ +|+++. .+++|-+.|
T Consensus 331 ----------------------------------~~~~~lavs~D~~~~ly~tn~~~~~VsViD 360 (386)
T 3sjl_D 331 ----------------------------------HEIDSINVSQDEKPLLYALSTGDKTLYIHD 360 (386)
T ss_dssp ----------------------------------EEECEEEECSSSSCEEEEEETTTTEEEEEE
T ss_pred ----------------------------------CCcceEEECCCCCeEEEEEcCCCCeEEEEE
Confidence 3788999999997 777765 589998877
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.54 E-value=3.9e-12 Score=127.60 Aligned_cols=234 Identities=10% Similarity=0.064 Sum_probs=161.3
Q ss_pred ceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCC-
Q 016446 45 EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDS- 123 (389)
Q Consensus 45 ~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~- 123 (389)
+....|+|+|+|+.+++ ...+ +.++.++...|++ ..+.. ....+. ++|+ |+|+.|..+..++
T Consensus 131 ~~P~~la~d~~g~lyv~----d~~~------~~I~~id~~~g~~---~~~~~--~~~~~~-ia~~-~~g~~l~~~d~~~~ 193 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAY----QRDD------PRVRLISVDDNKV---TTVHP--GFKGGK-PAVT-KDKQRVYSIGWEGT 193 (409)
T ss_dssp CCEEEEEECSTTEEEEE----ETTT------TEEEEEETTTTEE---EEEEE--TCCBCB-CEEC-TTSSEEEEEBSSTT
T ss_pred CCceEEEEeCCCCEEEE----ecCC------CcEEEEECCCCEE---EEeec--cCCCCc-eeEe-cCCCcEEEEecCCC
Confidence 35789999999996665 2344 6788888776664 12222 233345 9998 8999888887766
Q ss_pred -eEEEEeCCCCeEEEEe------cCCcEEEEEEcC-CceEEEEecCCCCeeEEEEEcCCCeEEEE----EeecCCce-e-
Q 016446 124 -IYKVFDLKNYTMLYSI------SDKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKV----FYHLLHRN-K- 189 (389)
Q Consensus 124 -tiklWdl~~g~~l~tl------~~~~V~~vafS~-g~~la~~~~~s~d~tiklWd~~tG~~l~t----l~~~~~~~-~- 189 (389)
.|.+++..++.....+ ....+++++|+| ++.|..+. .++.|+.||..+++.... ..++.... .
T Consensus 194 ~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d---~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~ 270 (409)
T 3hrp_A 194 HTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVD---SNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGP 270 (409)
T ss_dssp CEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEEC---TTCEEEEEETTTCCEEEEEECCCCSCCCCSSCC
T ss_pred ceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEE---CCCcEEEEECCCCCEEEEecccccCCCCCCccc
Confidence 7889998766654454 246789999996 77776653 257999999988874332 22222222 3
Q ss_pred EEEEEecCCCeEEEE-eCCCcEEEEECCCCeEEEEcccC---------------CCceEEEEEcCCCcEEEEEc--CCeE
Q 016446 190 KVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSRTE---------------FMTPSAFIFLYENQLFLTFR--NRTV 251 (389)
Q Consensus 190 ~v~f~~~~~~~l~~~-s~D~tIklWd~~tg~~~~~l~gh---------------~~~v~sv~fspdg~~laS~s--D~tI 251 (389)
.++|. |+++.|..+ ..+++|+.||... + +.++.++ ...+..++|+|+|+++++-+ ++.|
T Consensus 271 ~ia~~-p~~g~lyv~d~~~~~I~~~~~~g-~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I 347 (409)
T 3hrp_A 271 YLIYY-FVDSNFYMSDQNLSSVYKITPDG-E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCL 347 (409)
T ss_dssp EEEEE-TTTTEEEEEETTTTEEEEECTTC-C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEE
T ss_pred cEEEe-CCCCEEEEEeCCCCEEEEEecCC-C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEE
Confidence 89998 555566554 6889999999854 4 3444444 35689999999999888875 7799
Q ss_pred EEEeCC-CcEEEEeccCcCC----------cCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeC
Q 016446 252 AVWNFR-GELVTSFEDHLLW----------HPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSI 313 (389)
Q Consensus 252 klWd~~-G~~l~tl~gh~~~----------~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~ 313 (389)
+.|++. |+ +.++.|+... ........|+|+|||+++++-.. .+.||-.++
T Consensus 348 ~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~-----------n~~Ir~i~~ 408 (409)
T 3hrp_A 348 RKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAW-----------GKAIRKYAV 408 (409)
T ss_dssp EEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEEST-----------TCEEEEEEE
T ss_pred EEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECC-----------CCeEEEEEe
Confidence 999965 75 5667776110 00012589999999998888644 378887764
No 215
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.54 E-value=1.6e-12 Score=139.10 Aligned_cols=280 Identities=11% Similarity=0.078 Sum_probs=186.1
Q ss_pred eccEEEEEecCceEEEEecccceeeeeeecCCcc---------e-EEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEe
Q 016446 12 ARDIVFALAHSGVCAAFSRETNRRICFLNVSPDE---------V-IRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 81 (389)
Q Consensus 12 ~~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~---------~-v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~ 81 (389)
.+++|.+.+.++.+..+|.+||+.+=.+...... . -+++++ ++..|+. +..| ..+.-+
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v----~~~d------g~l~Al 136 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYV----GVLD------GRLEAI 136 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEE----ECTT------SEEEEE
T ss_pred ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEE----EccC------CEEEEE
Confidence 4788889999999999999999998776543211 0 122333 4566666 3456 566677
Q ss_pred EeccCCCCCcceeEeeecc-c--CceeEEEecC---CCeEEEEec-----CCCeEEEEeCCCCeEEEEecC---C-----
Q 016446 82 YIRRGKPDSGFALFESESL-K--WPGFVEFDDV---NGKVLTYSA-----QDSIYKVFDLKNYTMLYSISD---K----- 142 (389)
Q Consensus 82 ~i~~g~~~~~~~l~~~~~~-~--~~~~v~Fs~p---dG~~Las~s-----~D~tiklWdl~~g~~l~tl~~---~----- 142 (389)
|..+|++ +|..... . ....+..+ | +|++++..+ .|+.|+.||+++|+++.++.. .
T Consensus 137 Da~TG~~-----~W~~~~~~~~~~~~~~~~s-P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~ 210 (689)
T 1yiq_A 137 DAKTGQR-----AWSVDTRADHKRSYTITGA-PRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPP 210 (689)
T ss_dssp ETTTCCE-----EEEEECCSCTTSCCBCCSC-CEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCC
T ss_pred ECCCCCE-----eeeecCcCCCCCCccccCC-cEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccc
Confidence 8789987 6663322 1 01122221 3 677777544 479999999999999876641 0
Q ss_pred ------------------------cEE-EEEEcC-CceEEEEecCC------------CC----eeEEEEEcCCCeEEEE
Q 016446 143 ------------------------HVQ-EIKISP-GIMLLIFNRSS------------SH----VPLKILSIEDGTVLKV 180 (389)
Q Consensus 143 ------------------------~V~-~vafS~-g~~la~~~~~s------------~d----~tiklWd~~tG~~l~t 180 (389)
.+| .++|.| ++++..+..++ .| ..|.-||..||+.+-.
T Consensus 211 ~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~ 290 (689)
T 1yiq_A 211 EGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWH 290 (689)
T ss_dssp CSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEE
T ss_pred ccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEe
Confidence 122 578884 66776654321 01 1499999999999998
Q ss_pred EeecCCcee------EEEEE--ecCCC---eEEEEeCCCcEEEEECCCCeEEEEcccC-CCc------------------
Q 016446 181 FYHLLHRNK------KVDFI--EQFNE---KLLVKQENENLQILDVRNAELMEVSRTE-FMT------------------ 230 (389)
Q Consensus 181 l~~~~~~~~------~v~f~--~~~~~---~l~~~s~D~tIklWd~~tg~~~~~l~gh-~~~------------------ 230 (389)
++...+..+ .+.+. ..++. .++.++.++.+.++|.++|+++...+-. ..+
T Consensus 291 ~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~ 370 (689)
T 1yiq_A 291 YQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENA 370 (689)
T ss_dssp EESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHH
T ss_pred eecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhc
Confidence 874222111 11111 12332 5667889999999999999987422110 000
Q ss_pred --------------------eEEEEEcCCCcEEEEEc-------------------------------------------
Q 016446 231 --------------------PSAFIFLYENQLFLTFR------------------------------------------- 247 (389)
Q Consensus 231 --------------------v~sv~fspdg~~laS~s------------------------------------------- 247 (389)
-..++|+|+.+++....
T Consensus 371 ~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~ 450 (689)
T 1yiq_A 371 AYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMA 450 (689)
T ss_dssp CTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHH
T ss_pred cccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCC
Confidence 01268999988877652
Q ss_pred ---CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEec
Q 016446 248 ---NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKIN 323 (389)
Q Consensus 248 ---D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~ 323 (389)
+++|+.||+. |+.+-.++.+... +.-.++..|.+++.|+. |+.|+.||.+||+.+.+++
T Consensus 451 ~~~~g~l~A~D~~tG~~~W~~~~~~~~------~~g~~~tagglvf~gt~-----------dg~l~a~D~~tG~~lw~~~ 513 (689)
T 1yiq_A 451 KSWSGKLIAWDPVKQQAAWEVPYVTIF------NGGTLSTAGNLVFEGSA-----------DGRVIAYAADTGEKLWEQP 513 (689)
T ss_dssp TTCEEEEEEEETTTTEEEEEEEESSSC------CCCEEEETTTEEEEECT-----------TSEEEEEETTTCCEEEEEE
T ss_pred CCcceeEEEEECCCCCeEeEccCCCCc------cCccceECCCEEEEECC-----------CCcEEEEECCCCccceeee
Confidence 3789999996 9999888766532 44567778889999865 4999999999999999987
Q ss_pred CCC
Q 016446 324 ATN 326 (389)
Q Consensus 324 gH~ 326 (389)
...
T Consensus 514 ~~~ 516 (689)
T 1yiq_A 514 AAS 516 (689)
T ss_dssp CSS
T ss_pred CCC
Confidence 654
No 216
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.54 E-value=3.5e-12 Score=121.19 Aligned_cols=226 Identities=9% Similarity=0.091 Sum_probs=155.9
Q ss_pred cccCceeEEEecCCCe-EEEEecCCCeEEEEeCCCCeE-EEEecCCcEEEEEEcC-CceEEEEecCCCCeeEEEEEcCCC
Q 016446 99 SLKWPGFVEFDDVNGK-VLTYSAQDSIYKVFDLKNYTM-LYSISDKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDG 175 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~-~Las~s~D~tiklWdl~~g~~-l~tl~~~~V~~vafS~-g~~la~~~~~s~d~tiklWd~~tG 175 (389)
...++...+|+ |+|+ ++.++..++.|..|+. +|+. .+......+..+++++ |.++ ++. ..++.|.+|+.. |
T Consensus 43 ~~~~~egp~~~-~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~-v~~--~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 43 QATWSEGPAWW-EAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQRLV-HCE--HGRRAITRSDAD-G 116 (305)
T ss_dssp CCSSEEEEEEE-GGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECTTSCEE-EEE--TTTTEEEEECTT-S
T ss_pred CCcCccCCeEe-CCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECCCCCEE-EEE--CCCCEEEEECCC-C
Confidence 34456789998 8887 7788888999999998 5653 3344467899999994 6544 443 233689999975 7
Q ss_pred eEEEEEeec----CCceeEEEEEecCCCeEEE----EeC-------------CCcEEEEECCCCeEEEEcccCCCceEEE
Q 016446 176 TVLKVFYHL----LHRNKKVDFIEQFNEKLLV----KQE-------------NENLQILDVRNAELMEVSRTEFMTPSAF 234 (389)
Q Consensus 176 ~~l~tl~~~----~~~~~~v~f~~~~~~~l~~----~s~-------------D~tIklWd~~tg~~~~~l~gh~~~v~sv 234 (389)
+........ ......+++. +++..+++ +.. .+.|..+|.++|+..... +...+..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~i~~d-~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl 193 (305)
T 3dr2_A 117 QAHLLVGRYAGKRLNSPNDLIVA-RDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGL 193 (305)
T ss_dssp CEEEEECEETTEECSCCCCEEEC-TTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEE
T ss_pred CEEEEEeccCCCccCCCCCEEEC-CCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcce
Confidence 744322211 1234678886 55655554 221 356888888888876554 45578899
Q ss_pred EEcCCCcEEEEEc-C------CeEEEEeCC-CcE--EEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCC
Q 016446 235 IFLYENQLFLTFR-N------RTVAVWNFR-GEL--VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGS 304 (389)
Q Consensus 235 ~fspdg~~laS~s-D------~tIklWd~~-G~~--l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~ 304 (389)
+|+|||+.|..+. + +.|..|++. +.+ .+.+..-... ....+++++||++.++. .
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~----~pdgi~~d~~G~lwv~~-~----------- 257 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDG----LPDGFCVDRGGWLWSSS-G----------- 257 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSS----CCCSEEECTTSCEEECC-S-----------
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCC----CCCeEEECCCCCEEEec-C-----------
Confidence 9999999666554 5 789999986 331 1122111111 13579999999977764 2
Q ss_pred CCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcE
Q 016446 305 AGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLV 384 (389)
Q Consensus 305 D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tI 384 (389)
+.|.+||. +|+.+.++..+. .+.+++|+||++.|+.++.++..
T Consensus 258 -~gv~~~~~-~g~~~~~~~~~~-----------------------------------~~~~~~f~~d~~~L~it~~~~l~ 300 (305)
T 3dr2_A 258 -TGVCVFDS-DGQLLGHIPTPG-----------------------------------TASNCTFDQAQQRLFITGGPCLW 300 (305)
T ss_dssp -SEEEEECT-TSCEEEEEECSS-----------------------------------CCCEEEECTTSCEEEEEETTEEE
T ss_pred -CcEEEECC-CCCEEEEEECCC-----------------------------------ceeEEEEeCCCCEEEEEcCCeEE
Confidence 35999996 699998887654 57889999999999998888777
Q ss_pred EE
Q 016446 385 HV 386 (389)
Q Consensus 385 rl 386 (389)
++
T Consensus 301 ~~ 302 (305)
T 3dr2_A 301 ML 302 (305)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 217
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.54 E-value=2.3e-11 Score=115.28 Aligned_cols=225 Identities=11% Similarity=0.063 Sum_probs=156.5
Q ss_pred cceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCC
Q 016446 44 DEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDS 123 (389)
Q Consensus 44 ~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~ 123 (389)
...-.+.+|+|+++.|..+. ..+ ..+..|+...++. ..+. ....+..++|+ |||+++++. ++
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d---~~~------~~i~~~d~~~~~~----~~~~--~~~~~~~i~~~-~dG~l~v~~--~~ 73 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVD---IPA------KKVCRWDSFTKQV----QRVT--MDAPVSSVALR-QSGGYVATI--GT 73 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEE---TTT------TEEEEEETTTCCE----EEEE--CSSCEEEEEEB-TTSSEEEEE--TT
T ss_pred CccccCCeEECCCCEEEEEE---CCC------CEEEEEECCCCcE----EEEe--CCCceEEEEEC-CCCCEEEEE--CC
Confidence 46778899999877666532 233 5677788766653 1232 33567789998 899977764 67
Q ss_pred eEEEEeCCCCeEEEE--ec----CCcEEEEEEc-CCceEEEEecCCC------CeeEEEEEcC-CCeEEEEEeecCCcee
Q 016446 124 IYKVFDLKNYTMLYS--IS----DKHVQEIKIS-PGIMLLIFNRSSS------HVPLKILSIE-DGTVLKVFYHLLHRNK 189 (389)
Q Consensus 124 tiklWdl~~g~~l~t--l~----~~~V~~vafS-~g~~la~~~~~s~------d~tiklWd~~-tG~~l~tl~~~~~~~~ 189 (389)
.|.+||+++++.... .. ...+++++++ +|.+.++...... ....+||.+. .|+..... .+....+
T Consensus 74 ~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~-~~~~~pn 152 (297)
T 3g4e_A 74 KFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYF-DQVDISN 152 (297)
T ss_dssp EEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEE-EEESBEE
T ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEe-ecccccc
Confidence 899999988885422 22 2358999999 4665544322110 1234566554 35554433 3345568
Q ss_pred EEEEEecCCCeEEE-EeCCCcEEEEEC--CCCeE-----EEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-Cc
Q 016446 190 KVDFIEQFNEKLLV-KQENENLQILDV--RNAEL-----MEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GE 259 (389)
Q Consensus 190 ~v~f~~~~~~~l~~-~s~D~tIklWd~--~tg~~-----~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~ 259 (389)
.++|+ |++..+.. .+.++.|.+||+ ++|++ +..+..+...+..+++.++|++.++.. ++.|..||.+ |+
T Consensus 153 gi~~s-pdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 153 GLDWS-LDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp EEEEC-TTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC
T ss_pred ceEEc-CCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce
Confidence 89998 77777755 467899999997 57754 223444556789999999999999887 8899999997 99
Q ss_pred EEEEeccCcCCcCCCCeeEEEEC-CCCCEEEEEec
Q 016446 260 LVTSFEDHLLWHPDCNTNNIYIT-SDQDLIISYCK 293 (389)
Q Consensus 260 ~l~tl~gh~~~~~~~~v~sv~fS-pdG~~laS~s~ 293 (389)
++.++..+... +.+++|+ ||++.|...+.
T Consensus 232 ~~~~i~~p~~~-----~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 232 RLQTVKLPVDK-----TTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEEECSSSB-----EEEEEEESGGGCEEEEEEB
T ss_pred EEEEEECCCCC-----ceEEEEeCCCCCEEEEEcC
Confidence 99999876433 7999998 99998876654
No 218
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.53 E-value=2.5e-13 Score=136.71 Aligned_cols=169 Identities=15% Similarity=0.170 Sum_probs=132.7
Q ss_pred ceeEEEecCCCeEEEEecCCCeEEEEeCCCCe-------------EEEEecCCcEEEEEEcCCceEEEEecCCCCeeEEE
Q 016446 103 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-------------MLYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKI 169 (389)
Q Consensus 103 ~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~-------------~l~tl~~~~V~~vafS~g~~la~~~~~s~d~tikl 169 (389)
+..++++ +...++++|+.| .+++|++++.+ .+..+. . |..|+| ++.+|+++ .++.|++
T Consensus 40 ~nlLais-~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp-~-V~~l~f-d~~~L~v~----~~~~l~v 110 (388)
T 1xip_A 40 LQNLDIS-NSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIP-D-VIFVCF-HGDQVLVS----TRNALYS 110 (388)
T ss_dssp CBCEEEE-TTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECT-T-EEEEEE-ETTEEEEE----ESSEEEE
T ss_pred ccEEEEc-CCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCC-C-eeEEEE-CCCEEEEE----cCCcEEE
Confidence 3458998 788899999987 56679965433 223333 4 999999 99999887 3379999
Q ss_pred EEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-C
Q 016446 170 LSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-N 248 (389)
Q Consensus 170 Wd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D 248 (389)
||+.+-....++..|...+..+.+.+| .+++...||+|.+||++++.+.+ +...|.+++|||+| ++.+. |
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETT
T ss_pred EEchhhhccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcC
Confidence 999877766677777778888887643 38888999999999999888765 44689999999999 45565 9
Q ss_pred CeEEEEeCC-CcE--EEEe------c---cCcCCcCCCCeeEEEECCCCCEEEEEecC
Q 016446 249 RTVAVWNFR-GEL--VTSF------E---DHLLWHPDCNTNNIYITSDQDLIISYCKA 294 (389)
Q Consensus 249 ~tIklWd~~-G~~--l~tl------~---gh~~~~~~~~v~sv~fSpdG~~laS~s~D 294 (389)
|+|++|+.+ +++ .+++ + +|... |.+|.|.+++++|+++...
T Consensus 182 g~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~-----V~sI~wl~~~~flv~y~~~ 234 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYS-----PLSVTILSPQDFLAVFGNV 234 (388)
T ss_dssp SCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSE-----EEEEEESSSSEEEEEEECC
T ss_pred CcEEEEcCCCccccccceecCCcccccccCCCee-----EEEEEEecCCeEEEEEcCC
Confidence 999999998 454 7778 3 35433 8999999999999998753
No 219
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.52 E-value=8.9e-12 Score=126.75 Aligned_cols=274 Identities=11% Similarity=0.015 Sum_probs=175.6
Q ss_pred ceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeE--e-eec
Q 016446 23 GVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALF--E-SES 99 (389)
Q Consensus 23 gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~--~-~~~ 99 (389)
++|.+.|.+|++.+.++.-.. .. .|++||||+.|..+..+.+.-...=.-..+.+.|..+++......+- . ...
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~-~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~ 175 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGF-LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLV 175 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECS-SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CeEEEEECCCCEEEEEEECCC-CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccccc
Confidence 799999999999999999875 56 89999999988886542111000001157888888888762221110 0 001
Q ss_pred ccCceeEEEecCCCeEEEEecC--CCeEEEEeCCCCeEEEEecCCcEEEEEEc-CC-ceEEEEecCCCCeeEEEEEcCCC
Q 016446 100 LKWPGFVEFDDVNGKVLTYSAQ--DSIYKVFDLKNYTMLYSISDKHVQEIKIS-PG-IMLLIFNRSSSHVPLKILSIEDG 175 (389)
Q Consensus 100 ~~~~~~v~Fs~pdG~~Las~s~--D~tiklWdl~~g~~l~tl~~~~V~~vafS-~g-~~la~~~~~s~d~tiklWd~~tG 175 (389)
...|..++|| |||++|..+.. +++|-+-|+++++.+.++.-... +.+. +| ..+++.+ .|+++-.-++.++
T Consensus 176 g~~P~~~~~s-pDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~--~~~~p~g~~~~v~~~---~dG~~~~V~~~~~ 249 (426)
T 3c75_H 176 GTYQWMNALT-PDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC--YHIFPASPTVFYMNC---RDGSLARVDFADG 249 (426)
T ss_dssp SCCGGGSEEC-TTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEE---TTSSEEEEECCTT
T ss_pred CCCcceEEEc-CCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc--eeeccCCCcEEEEEc---CCCCEEEEECCCC
Confidence 2356779998 99998877653 68999999999999888863221 1111 11 2222221 1234444444455
Q ss_pred eEEEEE----eecCCce-eEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEE--Ecc---c-------CCCceEEEEEcC
Q 016446 176 TVLKVF----YHLLHRN-KKVDFIEQFNEKLLVKQENENLQILDVRNAELME--VSR---T-------EFMTPSAFIFLY 238 (389)
Q Consensus 176 ~~l~tl----~~~~~~~-~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~--~l~---g-------h~~~v~sv~fsp 238 (389)
+...+. .-...++ ..+.|. ++++.++.....++|.+.|+.++.... .+. . .......++|+|
T Consensus 250 ~v~~~~~~~~~v~~~p~~~~~~~~-~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~ 328 (426)
T 3c75_H 250 ETKVTNTEVFHTEDELLINHPAFS-LRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHR 328 (426)
T ss_dssp CCEEEECCCCSCTTSCBCSCCEEC-TTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEG
T ss_pred cEEEEeeeeeccCCCceeeEeeec-CCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcC
Confidence 544321 1001111 234555 677787777788999999997654321 110 0 011122378999
Q ss_pred CCcEEEEEc-----------CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCC-EEEEEecCCCcccccCCCC
Q 016446 239 ENQLFLTFR-----------NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYCKAEPEDQWMEGSA 305 (389)
Q Consensus 239 dg~~laS~s-----------D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~-~laS~s~D~~~~~~~~s~D 305 (389)
||+++.... +++|-+.|.. ++.++++.--.. .+.++|+|||+ +|++.... +
T Consensus 329 dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~------P~gia~spDg~~~lyv~n~~----------s 392 (426)
T 3c75_H 329 QSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHE------IDSINVSQDAEPLLYALSAG----------T 392 (426)
T ss_dssp GGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE------ECEEEECCSSSCEEEEEETT----------T
T ss_pred CCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCC------cCeEEEccCCCEEEEEEcCC----------C
Confidence 977655442 2479999996 999998874332 37999999999 88888743 4
Q ss_pred CeEEEEeCCCCeEEEEe
Q 016446 306 GSINVSSILTGKCLAKI 322 (389)
Q Consensus 306 ~tIklWd~~tg~~l~tl 322 (389)
++|-++|+.+++.++++
T Consensus 393 ~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 393 QTLHIYDAATGEELRSV 409 (426)
T ss_dssp TEEEEEETTTCCEEEEE
T ss_pred CeEEEEECCCCCEEEEe
Confidence 89999999999999998
No 220
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.51 E-value=8.6e-12 Score=133.25 Aligned_cols=280 Identities=13% Similarity=0.081 Sum_probs=187.7
Q ss_pred eeccEEEEEecCceEEEEecccceeeeeeecCCcc----------eEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 11 AARDIVFALAHSGVCAAFSRETNRRICFLNVSPDE----------VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 11 ~~~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~----------~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
..+++|.+.+.++.+..+|..||+.+=+....... ..+++++ ++..|+. +..| ..+..
T Consensus 75 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v----~~~d------g~l~a 142 (677)
T 1kb0_A 75 VVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYV----GAWD------GRLIA 142 (677)
T ss_dssp EETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEE----ECTT------SEEEE
T ss_pred EECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEE----EcCC------CEEEE
Confidence 34788888888999999999999998766543210 1134444 4566666 3455 56667
Q ss_pred eEeccCCCCCcceeEeeecc-c-----Cce-eEEEecCCCeEEEEec-----CCCeEEEEeCCCCeEEEEecC-C-c---
Q 016446 81 EYIRRGKPDSGFALFESESL-K-----WPG-FVEFDDVNGKVLTYSA-----QDSIYKVFDLKNYTMLYSISD-K-H--- 143 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~~~~~-~-----~~~-~v~Fs~pdG~~Las~s-----~D~tiklWdl~~g~~l~tl~~-~-~--- 143 (389)
.|..+|+. +|..... . .+. .... .++++++..+ .|+.|+.+|+++|+++.++.. . .
T Consensus 143 lD~~tG~~-----~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~ 215 (677)
T 1kb0_A 143 LDAATGKE-----VWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSK 215 (677)
T ss_dssp EETTTCCE-----EEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTS
T ss_pred EECCCCCE-----EeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccc
Confidence 78788887 6653322 1 111 1222 2576666544 379999999999999877641 1 0
Q ss_pred ----------------------------E-EEEEEc-CCceEEEEecCC------------CC----eeEEEEEcCCCeE
Q 016446 144 ----------------------------V-QEIKIS-PGIMLLIFNRSS------------SH----VPLKILSIEDGTV 177 (389)
Q Consensus 144 ----------------------------V-~~vafS-~g~~la~~~~~s------------~d----~tiklWd~~tG~~ 177 (389)
+ ..++|. +++++..+..+. .| .+|.-+|..||+.
T Consensus 216 ~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~ 295 (677)
T 1kb0_A 216 PFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKY 295 (677)
T ss_dssp CCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCE
T ss_pred cccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCE
Confidence 1 247888 466776654321 11 2599999999999
Q ss_pred EEEEeecCCc------eeEEEEE--ecCC---CeEEEEeCCCcEEEEECCCCeEEEEcccCC-Cc----------e----
Q 016446 178 LKVFYHLLHR------NKKVDFI--EQFN---EKLLVKQENENLQILDVRNAELMEVSRTEF-MT----------P---- 231 (389)
Q Consensus 178 l~tl~~~~~~------~~~v~f~--~~~~---~~l~~~s~D~tIklWd~~tg~~~~~l~gh~-~~----------v---- 231 (389)
+-.++...+. .....+. ..++ ..++.++.++.+.++|.++|+++...+-.. .+ +
T Consensus 296 ~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~ 375 (677)
T 1kb0_A 296 KWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAA 375 (677)
T ss_dssp EEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGG
T ss_pred EEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccc
Confidence 9988742221 1111111 1245 456778899999999999999976543211 00 1
Q ss_pred --------------------EEEEEcCCCcEEEEEc-C------------------------------------------
Q 016446 232 --------------------SAFIFLYENQLFLTFR-N------------------------------------------ 248 (389)
Q Consensus 232 --------------------~sv~fspdg~~laS~s-D------------------------------------------ 248 (389)
..++|+|++.++.... +
T Consensus 376 ~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 455 (677)
T 1kb0_A 376 ARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKP 455 (677)
T ss_dssp GGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCC
T ss_pred cCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCC
Confidence 1578999988887653 2
Q ss_pred -CeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCC
Q 016446 249 -RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATN 326 (389)
Q Consensus 249 -~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~ 326 (389)
++|..||+. |+.+-.++... + +++..++++|.+++.++. |+++++||+.||+++.++.-..
T Consensus 456 ~g~l~A~D~~tG~~~W~~~~~~-~-----~~~g~~~~~g~~v~~g~~-----------dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 456 FGRLLAWDPVAQKAAWSVEHVS-P-----WNGGTLTTAGNVVFQGTA-----------DGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp EEEEEEEETTTTEEEEEEEESS-S-----CCCCEEEETTTEEEEECT-----------TSEEEEEETTTCCEEEEEECSS
T ss_pred ccEEEEEeCCCCcEEeecCCCC-C-----CcCcceEeCCCEEEEECC-----------CCcEEEEECCCCceeeeeeCCC
Confidence 789999996 99988776332 2 356678889999998865 4999999999999999997543
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.51 E-value=7.8e-13 Score=132.01 Aligned_cols=284 Identities=6% Similarity=-0.056 Sum_probs=173.6
Q ss_pred ccEEEEEecCc----eEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCC
Q 016446 13 RDIVFALAHSG----VCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKP 88 (389)
Q Consensus 13 ~~~~a~~~~~g----tiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~ 88 (389)
....++...++ ++-+.|.+|++.+.++.... .. .++|||||++|..+..+......+-.-..+.++|+.+++.
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v 108 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP 108 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEEEEeCCC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence 44445555555 88899999999999998876 56 7999999999988764321100001127899999999987
Q ss_pred CCcceeEeee---cccCceeEEEecCCCeEEEEecC--CCeEEE--EeCCCCeEEEEecCCcEEEEEEc-CCceEEEEec
Q 016446 89 DSGFALFESE---SLKWPGFVEFDDVNGKVLTYSAQ--DSIYKV--FDLKNYTMLYSISDKHVQEIKIS-PGIMLLIFNR 160 (389)
Q Consensus 89 ~~~~~l~~~~---~~~~~~~v~Fs~pdG~~Las~s~--D~tikl--Wdl~~g~~l~tl~~~~V~~vafS-~g~~la~~~~ 160 (389)
.....+-... ....|..++|| |||++|..+.. +.+|.+ +|+++ +.++.-... +.+. +|.....+
T Consensus 109 v~~I~v~~~~~~~~g~~P~~ia~S-pDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~--~~~~p~g~~~~~~-- 180 (368)
T 1mda_H 109 IADIELPDAPRFSVGPRVHIIGNC-ASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC--FHIHPGAAATHYL-- 180 (368)
T ss_dssp EEEEEETTSCSCCBSCCTTSEEEC-TTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC--CCCEEEETTEEEC--
T ss_pred EEEEECCCccccccCCCcceEEEc-CCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc--eEEccCCCeEEEE--
Confidence 3221110000 11347789998 99998887653 567999 99877 444431110 1112 22222221
Q ss_pred CCCCeeEEEEEcCC-----CeEEEEEe--ecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCe--EEEEcc------
Q 016446 161 SSSHVPLKILSIED-----GTVLKVFY--HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAE--LMEVSR------ 225 (389)
Q Consensus 161 ~s~d~tiklWd~~t-----G~~l~tl~--~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~--~~~~l~------ 225 (389)
.+.|+++-.-|+.+ |+.+.+.. .+.+.-.. + . ++++.++..+. ++|.+-|+.++. .+..+.
T Consensus 181 ~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~-~-~-~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~ 256 (368)
T 1mda_H 181 GSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA-Q-A-NYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGR 256 (368)
T ss_dssp CCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE-E-E-TTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHH
T ss_pred EcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc-c-c-ccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccc
Confidence 22344444556555 44331100 00011111 3 3 56777777777 999999997643 233221
Q ss_pred -cCCCce---EEEEEcCCCcEEEEE-c-C--------CeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEE
Q 016446 226 -TEFMTP---SAFIFLYENQLFLTF-R-N--------RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIIS 290 (389)
Q Consensus 226 -gh~~~v---~sv~fspdg~~laS~-s-D--------~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS 290 (389)
.+.... ..++|+|||+.+..+ . + +.+.++|+. ++.++++.-... .+.++|+|||++++.
T Consensus 257 ~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~------p~gi~~s~Dg~~l~v 330 (368)
T 1mda_H 257 KADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHD------SDAIIAAQDGASDNY 330 (368)
T ss_dssp HHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEE------ECEEEECCSSSCEEE
T ss_pred cccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCC------cceEEECCCCCEEEE
Confidence 011111 127899998766543 3 3 255699996 999998875543 379999999985544
Q ss_pred EecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCC
Q 016446 291 YCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATN 326 (389)
Q Consensus 291 ~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~ 326 (389)
++. ..+++|.++|+.+++.++++....
T Consensus 331 a~~---------~~~~~VsVID~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 331 ANS---------AGTEVLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp EEE---------TTTTEEEEEESSSCEEEEECCCCS
T ss_pred Ecc---------CCCCeEEEEECCCCcEEEEEECCC
Confidence 443 014899999999999999998664
No 222
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.51 E-value=4.7e-15 Score=146.59 Aligned_cols=186 Identities=12% Similarity=0.054 Sum_probs=109.5
Q ss_pred CCeEEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCce-e
Q 016446 112 NGKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRN-K 189 (389)
Q Consensus 112 dG~~Las~s~D~tiklWdl~~g~~l~tl~~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~-~ 189 (389)
++.+|+.++.|++|+.||+++|+++.++....+.+..+. +|..++++ +.|++|+.||.+||+++..++.+.... .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g~~~v~~---s~dg~l~a~d~~tG~~~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAFLPD---PNDGSLYTLGSKNNEGLTKLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEECCCSCCCC-----CCEEEC---TTTCCEEEC-----CCSEECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecCCCceecceEcCCCEEEEe---CCCCEEEEEECCCCceeeeeeccCccccc
Confidence 356788889999999999999999987765556555555 55566543 456899999999999988776432211 1
Q ss_pred -EEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEecc
Q 016446 190 -KVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFED 266 (389)
Q Consensus 190 -~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~g 266 (389)
+..+ ..++.+++++.|++|..||.++|+++..+..+. .+.++|++.+++.++ |++|..||.. |+++.+++.
T Consensus 85 ~sp~~--~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 85 ASPCR--SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp TCSCC-------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred cCceE--ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 1111 135677788899999999999999988877664 245678888888888 9999999996 998766653
Q ss_pred CcCCcCCCCeeEEEECCCC---CEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecC
Q 016446 267 HLLWHPDCNTNNIYITSDQ---DLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 324 (389)
Q Consensus 267 h~~~~~~~~v~sv~fSpdG---~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~g 324 (389)
+. ..+.++++++ ..++.++. ||.|+.||..+|+++.+.+-
T Consensus 159 ~~-------~~~~~~~~~~~~~~~v~~~~~-----------dg~v~a~d~~tG~~~W~~~~ 201 (369)
T 2hz6_A 159 FD-------YAASLPEDDVDYKMSHFVSNG-----------DGLVVTVDSESGDVLWIQNY 201 (369)
T ss_dssp EE-------ECCBCCCCCTTCCCCEEEEET-----------SCEEEEECTTTCCEEEEEEC
T ss_pred cc-------ccCccccCCccccceEEEECC-----------CCEEEEEECCCCcEEEEecC
Confidence 32 1234445542 34444554 48999999999999988763
No 223
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.50 E-value=1.6e-10 Score=112.24 Aligned_cols=272 Identities=13% Similarity=0.142 Sum_probs=171.3
Q ss_pred EeeccEEEEEecCceEEEEecccceeeeeeecCC--------cceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEe
Q 016446 10 VAARDIVFALAHSGVCAAFSRETNRRICFLNVSP--------DEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 81 (389)
Q Consensus 10 ~~~~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~--------~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~ 81 (389)
+..++.|.+++.++.+..+|.++|+.+-...... ...+.+...- ++..|..+ +.+ ..+...
T Consensus 50 ~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~----~~~------g~l~a~ 118 (376)
T 3q7m_A 50 ALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-SGGHVYIG----SEK------AQVYAL 118 (376)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-ETTEEEEE----ETT------SEEEEE
T ss_pred EEECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-eCCEEEEE----cCC------CEEEEE
Confidence 3458889999999999999999999886666532 1223332222 34455552 345 566777
Q ss_pred EeccCCCCCcceeEeeecccCcee-EEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEecC-CcE------EEEEEcCCc
Q 016446 82 YIRRGKPDSGFALFESESLKWPGF-VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KHV------QEIKISPGI 153 (389)
Q Consensus 82 ~i~~g~~~~~~~l~~~~~~~~~~~-v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~~-~~V------~~vafS~g~ 153 (389)
|..+|+. +|.......+.+ .... +| .|..++.++.|..+|.++|+.+..... ..+ ...++.++
T Consensus 119 d~~tG~~-----~W~~~~~~~~~~~p~~~--~~-~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~- 189 (376)
T 3q7m_A 119 NTSDGTV-----AWQTKVAGEALSRPVVS--DG-LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFG- 189 (376)
T ss_dssp ETTTCCE-----EEEEECSSCCCSCCEEE--TT-EEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETT-
T ss_pred ECCCCCE-----EEEEeCCCceEcCCEEE--CC-EEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECC-
Confidence 8788886 565333222222 3343 45 455577899999999999998877652 222 22233344
Q ss_pred eEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCce----eE---EEEEe-cCCCeEEEEeCCCcEEEEECCCCeEEEEcc
Q 016446 154 MLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRN----KK---VDFIE-QFNEKLLVKQENENLQILDVRNAELMEVSR 225 (389)
Q Consensus 154 ~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~----~~---v~f~~-~~~~~l~~~s~D~tIklWd~~tg~~~~~l~ 225 (389)
.+.++ ..++.+..+|..+|+.+.+.......- .. +...+ ..++.+.+++.++.+..+|.++|+.+....
T Consensus 190 ~v~~g---~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~ 266 (376)
T 3q7m_A 190 AAVVG---GDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRE 266 (376)
T ss_dssp EEEEC---CTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred EEEEE---cCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeecc
Confidence 45444 335789999999999998876321100 00 10100 136788888899999999999999876644
Q ss_pred cCCCceEEEEEcCCCcEEEEEcCCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCC
Q 016446 226 TEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGS 304 (389)
Q Consensus 226 gh~~~v~sv~fspdg~~laS~sD~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~ 304 (389)
. .....++. .++++++...++.|..+|.. |+.+...+...... +.+..+ .+..|..++.
T Consensus 267 ~--~~~~~~~~-~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~----~~~~~~--~~~~l~v~~~----------- 326 (376)
T 3q7m_A 267 L--GSVNDFIV-DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRL----LTSPVL--YNGNLVVGDS----------- 326 (376)
T ss_dssp C--CCEEEEEE-ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSC----CCCCEE--ETTEEEEECT-----------
T ss_pred C--CCCCCceE-ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCc----ccCCEE--ECCEEEEEeC-----------
Confidence 2 22334433 35555555559999999996 99877665221111 222232 3455666554
Q ss_pred CCeEEEEeCCCCeEEEEecC
Q 016446 305 AGSINVSSILTGKCLAKINA 324 (389)
Q Consensus 305 D~tIklWd~~tg~~l~tl~g 324 (389)
+|.|..+|..+|+.+...+.
T Consensus 327 ~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 327 EGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp TSEEEEEETTTCCEEEEEEC
T ss_pred CCeEEEEECCCCcEEEEEec
Confidence 48999999999999988765
No 224
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.48 E-value=1.7e-10 Score=111.22 Aligned_cols=224 Identities=10% Similarity=0.009 Sum_probs=152.5
Q ss_pred ceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCe
Q 016446 45 EVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSI 124 (389)
Q Consensus 45 ~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~t 124 (389)
....+.+|+|+++.|..+. ..+ ..+..++...|+. ..+. ....+.+++|+ |||+++++. . ..
T Consensus 49 ~~~egp~~~~~~~~l~~~d---~~~------~~i~~~d~~~~~~----~~~~--~~~~v~~i~~~-~dg~l~v~~-~-~g 110 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFN---ILE------RELHELHLASGRK----TVHA--LPFMGSALAKI-SDSKQLIAS-D-DG 110 (326)
T ss_dssp SBEEEEEEETTTTEEEEEE---GGG------TEEEEEETTTTEE----EEEE--CSSCEEEEEEE-ETTEEEEEE-T-TE
T ss_pred CCCcCCeEeCCCCEEEEEE---CCC------CEEEEEECCCCcE----EEEE--CCCcceEEEEe-CCCeEEEEE-C-CC
Confidence 4567889999987766642 233 5677778666653 1232 22456789998 899988865 3 45
Q ss_pred EEEEeCCCCeEEEEec------CCcEEEEEEcC-CceEEEEecC-CCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEec
Q 016446 125 YKVFDLKNYTMLYSIS------DKHVQEIKISP-GIMLLIFNRS-SSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQ 196 (389)
Q Consensus 125 iklWdl~~g~~l~tl~------~~~V~~vafS~-g~~la~~~~~-s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~ 196 (389)
|.+||..+|+...... ...+.+++++| |...++.... ......+||.+.+|+...... +......++|+ +
T Consensus 111 l~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~~~~~-~~~~~~~i~~s-~ 188 (326)
T 2ghs_A 111 LFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFA-DISIPNSICFS-P 188 (326)
T ss_dssp EEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEE-EESSEEEEEEC-T
T ss_pred EEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcEEEeeC-CCcccCCeEEc-C
Confidence 9999998888543222 13689999995 6554433211 011234455444676554333 33456788887 6
Q ss_pred CCCeEEEE-eCCCcEEEEECC--CC-e-----EEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCCCcEEEEecc
Q 016446 197 FNEKLLVK-QENENLQILDVR--NA-E-----LMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGELVTSFED 266 (389)
Q Consensus 197 ~~~~l~~~-s~D~tIklWd~~--tg-~-----~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~G~~l~tl~g 266 (389)
++..+..+ +.++.|.+||+. +| + .+..+.++...+..+++.++|++.++.. ++.|..||.+|+++.++..
T Consensus 189 dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~~ 268 (326)
T 2ghs_A 189 DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEV 268 (326)
T ss_dssp TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEEC
T ss_pred CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEEEC
Confidence 77777665 578999999986 77 3 2334444556788999999999998886 7899999999998888876
Q ss_pred CcCCcCCCCeeEEEEC-CCCCEEEEEec
Q 016446 267 HLLWHPDCNTNNIYIT-SDQDLIISYCK 293 (389)
Q Consensus 267 h~~~~~~~~v~sv~fS-pdG~~laS~s~ 293 (389)
+... +.+++|+ ||++.|..++.
T Consensus 269 ~~~~-----~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 269 PGKQ-----TTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp SCSB-----EEEEEEESTTSCEEEEEEB
T ss_pred CCCC-----cEEEEEecCCCCEEEEEec
Confidence 5543 7899998 99988866554
No 225
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.45 E-value=1.4e-11 Score=116.11 Aligned_cols=289 Identities=9% Similarity=0.015 Sum_probs=198.5
Q ss_pred eccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCc
Q 016446 12 ARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSG 91 (389)
Q Consensus 12 ~~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~ 91 (389)
.+..|.+++.++.+..|| .+|+.+...... ...+.+++..++|...+. .+ . +..+| ++|+.
T Consensus 29 ~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~-~~~~~~~~~~~~g~l~v~------t~------~-l~~~d-~~g~~--- 89 (330)
T 3hxj_A 29 KNGTIYLGSSNKNLYAIN-TDGSVKWFFKSG-EIIECRPSIGKDGTIYFG------SD------K-VYAIN-PDGTE--- 89 (330)
T ss_dssp TTSCEECSSTTTTTEEEC-TTSCEEESSCGG-GEEEECCEETTTTEECCS------SC------E-EEEEC-CCGGG---
T ss_pred cCCeEEEEcCCCEEEEEC-CCCcEEEEEecC-CCcccceEEecCCcEEEe------cC------c-EEEEC-CCCcE---
Confidence 366788888899999999 789988776654 367789999888875443 22 2 44445 35554
Q ss_pred ceeEeeeccc-CceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEcCCceEEEEecCCCCeeEE
Q 016446 92 FALFESESLK-WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLK 168 (389)
Q Consensus 92 ~~l~~~~~~~-~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS~g~~la~~~~~s~d~tik 168 (389)
+|...... .....++. +|.+.+ ++.++.+..+|.. |+.+.... ...+.++.+.+++.+..+. .++.|.
T Consensus 90 --~~~~~~~~~~~~~~~~~--~~~l~v-~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt---~~~~l~ 160 (330)
T 3hxj_A 90 --KWRFDTKKAIVSDFTIF--EDILYV-TSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGS---NDNYLY 160 (330)
T ss_dssp --GGGSCC-----CCEEEE--TTEEEE-ECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEEC---TTSEEE
T ss_pred --EEEEECCCCcccCceEE--CCEEEE-EecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEc---CCCEEE
Confidence 22111000 11234443 565544 6778999999987 88776654 3456677777444454553 346899
Q ss_pred EEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEcC
Q 016446 169 ILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN 248 (389)
Q Consensus 169 lWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~sD 248 (389)
.+|.. |+.+..+......+..+.+. .++.+.+++ +.|..+| .+|+.+.........+.++++.++|++.+...+
T Consensus 161 ~~d~~-g~~~~~~~~~~~~~~~~~~d--~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ 234 (330)
T 3hxj_A 161 AINPD-GTEKWRFKTNDAITSAASIG--KDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLD 234 (330)
T ss_dssp EECTT-SCEEEEEECSSCCCSCCEEC--TTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETT
T ss_pred EECCC-CCEeEEEecCCCceeeeEEc--CCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCC
Confidence 99988 99988887544555555542 245666666 8999999 788887776666677889999999998887777
Q ss_pred CeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCC
Q 016446 249 RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCS 328 (389)
Q Consensus 249 ~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~ 328 (389)
+.|..+|.+|+.+..+...... +.++++.++|++.+. + .++.|..+|. +|+.+..+.-..
T Consensus 235 ~gl~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~g~l~v~-t-----------~~ggl~~~d~-~g~~~~~~~~~~-- 294 (330)
T 3hxj_A 235 GHLYAINPDGTEKWRFKTGKRI-----ESSPVIGNTDTIYFG-S-----------YDGHLYAINP-DGTEKWNFETGS-- 294 (330)
T ss_dssp TEEEEECTTSCEEEEEECSSCC-----CSCCEECTTSCEEEE-C-----------TTCEEEEECT-TSCEEEEEECSS--
T ss_pred CeEEEECCCCCEeEEeeCCCCc-----cccceEcCCCeEEEe-c-----------CCCCEEEECC-CCcEEEEEEcCC--
Confidence 7777788888887776644332 356778888887765 3 2478999995 788887765433
Q ss_pred CCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEc
Q 016446 329 PKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVW 387 (389)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW 387 (389)
..+.++.++++|++. -|+.+|.+++-
T Consensus 295 --------------------------------~~~~~~~~d~~g~l~-~gt~~G~~~~~ 320 (330)
T 3hxj_A 295 --------------------------------WIIATPVIDENGTIY-FGTRNGKFYAL 320 (330)
T ss_dssp --------------------------------CCCSCCEECTTCCEE-EECTTSCEEEE
T ss_pred --------------------------------ccccceEEcCCCEEE-EEcCCCeEEEE
Confidence 356778889999855 57889988764
No 226
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.45 E-value=1.7e-11 Score=124.66 Aligned_cols=278 Identities=12% Similarity=0.093 Sum_probs=182.6
Q ss_pred eeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEec----------CC
Q 016446 53 NKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA----------QD 122 (389)
Q Consensus 53 spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s----------~D 122 (389)
.|+++.+..+. ... .+++ ..+.+-|..++++ +.+...-..| .++|| |||++|..+. .+
T Consensus 81 ~~~~~~vyV~n--~~~--~~~~-~~VsVID~~t~~v-----v~~I~vG~~P-gia~S-pDgk~lyVan~~~~~~~~G~~~ 148 (426)
T 3c75_H 81 APDARRVYIQD--PAH--FAAI-TQQFVIDGSTGRI-----LGMTDGGFLP-HPVAA-EDGSFFAQASTVFERIARGKRT 148 (426)
T ss_dssp CCCTTEEEEEE--CTT--TCSS-EEEEEEETTTTEE-----EEEEEECSSC-EEEEC-TTSSCEEEEEEEEEETTEEEEE
T ss_pred CCCCCEEEEEC--CCc--CCCC-CeEEEEECCCCEE-----EEEEECCCCC-ceEEC-CCCCEEEEEeccccccccCCCC
Confidence 46777655533 111 2223 6788888888876 2222233356 89998 8999776554 46
Q ss_pred CeEEEEeCCCCeEEEEec-C--------CcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEE
Q 016446 123 SIYKVFDLKNYTMLYSIS-D--------KHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVD 192 (389)
Q Consensus 123 ~tiklWdl~~g~~l~tl~-~--------~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~ 192 (389)
++|.++|..+++.+.++. . ..-..++|| ||++|.++... .+++|-+.|+.+++.++++.- ... +.
T Consensus 149 ~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~-~~~~VsVID~~t~kvv~~I~v--~g~--~~ 223 (426)
T 3c75_H 149 DYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS-PAPAVGVVDLEGKTFDRMLDV--PDC--YH 223 (426)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS-SSCEEEEEETTTTEEEEEEEC--CSE--EE
T ss_pred CEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC-CCCeEEEEECCCCeEEEEEEc--CCc--ee
Confidence 799999999999887764 2 234578999 68888887532 247899999999999999873 221 22
Q ss_pred EEecCC-CeEEEEeCCCcEEEEECCCCeEEEE----cccCCCce-EEEEEcCCCcEEEEEc-CCeEEEEeCCCcEE---E
Q 016446 193 FIEQFN-EKLLVKQENENLQILDVRNAELMEV----SRTEFMTP-SAFIFLYENQLFLTFR-NRTVAVWNFRGELV---T 262 (389)
Q Consensus 193 f~~~~~-~~l~~~s~D~tIklWd~~tg~~~~~----l~gh~~~v-~sv~fspdg~~laS~s-D~tIklWd~~G~~l---~ 262 (389)
.. |++ ..+++-+.|+++-+.+..+++...+ +.-....+ ..++|+|+++.++-.+ .++|-+-|..+.-+ .
T Consensus 224 ~~-p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~ 302 (426)
T 3c75_H 224 IF-PASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRA 302 (426)
T ss_dssp EE-EEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECC
T ss_pred ec-cCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEee
Confidence 22 333 4445567888888888877766532 11111111 2357899988877766 88999999864322 2
Q ss_pred Eecc---C---cCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCC---CCCeEEEEeCCCCeEEEEecCCCCCCCccc
Q 016446 263 SFED---H---LLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEG---SAGSINVSSILTGKCLAKINATNCSPKVDD 333 (389)
Q Consensus 263 tl~g---h---~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s---~D~tIklWd~~tg~~l~tl~gH~~~~~~~~ 333 (389)
+++- . ..+.+. ....++|+|||++|....... ..++ .+++|-+.|+.|++.++++..-.
T Consensus 303 ~~~~~~~~~i~~g~~p~-g~~~va~s~dg~rlyVa~~~~----~~gthk~~s~~VsVID~~T~kvv~~I~vg~------- 370 (426)
T 3c75_H 303 PIEALTEAERADDWRPG-GWQQTAYHRQSDRIYLLVDQR----DEWKHKAASRFVVVLNAETGERINKIELGH------- 370 (426)
T ss_dssp CEESSCTTTGGGTEEEC-SSSCEEEEGGGTEEEEEEEEC----CTTCTTSCEEEEEEEETTTCCEEEEEEEEE-------
T ss_pred eeeeccccccccccccC-CceeeEEcCCCCEEEEEeccc----ccccccCCCCEEEEEECCCCeEEEEEECCC-------
Confidence 2110 0 001110 023489999999777653210 0000 13589999999999999996432
Q ss_pred ccCCCCCCCccccccccceecccccccCCEEEEEECCCCC-EEEEec-CCCcEEEcc
Q 016446 334 ELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERN-EIYTGN-RHGLVHVWS 388 (389)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~-~LaSgs-~D~tIrlW~ 388 (389)
..++++|+|||+ .|+++. .+++|-+.|
T Consensus 371 ----------------------------~P~gia~spDg~~~lyv~n~~s~~VsVID 399 (426)
T 3c75_H 371 ----------------------------EIDSINVSQDAEPLLYALSAGTQTLHIYD 399 (426)
T ss_dssp ----------------------------EECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred ----------------------------CcCeEEEccCCCEEEEEEcCCCCeEEEEE
Confidence 578899999999 999998 599999887
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.44 E-value=3.6e-11 Score=128.69 Aligned_cols=269 Identities=12% Similarity=0.083 Sum_probs=171.9
Q ss_pred eeeeEeEeccCCCCCcceeEeeecccC------------ceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEecCC-
Q 016446 76 RSTKIEYIRRGKPDSGFALFESESLKW------------PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK- 142 (389)
Q Consensus 76 ~~~~l~~i~~g~~~~~~~l~~~~~~~~------------~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~~~- 142 (389)
..+.-.|..+|+. +|..+.... ...++.. +| .|..++.|+.+.-+|.++|+++......
T Consensus 80 ~~v~AlD~~tG~~-----~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~g-~v~v~~~dg~l~AlDa~TG~~~W~~~~~~ 151 (689)
T 1yiq_A 80 SVVYALDARDGRL-----IWKYDPQSDRHRAGEACCDAVNRGVAVW--KG-KVYVGVLDGRLEAIDAKTGQRAWSVDTRA 151 (689)
T ss_dssp GCEEEEETTTCCE-----EEEECCCCCGGGGGGCTTCSCCCCCEEE--TT-EEEEECTTSEEEEEETTTCCEEEEEECCS
T ss_pred CeEEEEECCCCce-----eEEEcCCCCccccccccccCCCCccEEE--CC-EEEEEccCCEEEEEECCCCCEeeeecCcC
Confidence 3455567788886 666331110 1224553 45 5566788999999999999998666421
Q ss_pred ---cEEEEEEcC---CceEEEEecCC---CCeeEEEEEcCCCeEEEEEeecC----------------------------
Q 016446 143 ---HVQEIKISP---GIMLLIFNRSS---SHVPLKILSIEDGTVLKVFYHLL---------------------------- 185 (389)
Q Consensus 143 ---~V~~vafS~---g~~la~~~~~s---~d~tiklWd~~tG~~l~tl~~~~---------------------------- 185 (389)
....+..+| +..++++.... .++.|+-||.+||+++-++..-.
T Consensus 152 ~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~ 231 (689)
T 1yiq_A 152 DHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQG 231 (689)
T ss_dssp CTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHC
T ss_pred CCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecC
Confidence 112222223 45555543321 36899999999999998875210
Q ss_pred --Cce-eEEEEEecCCCeEEEEeCCCc-------------------EEEEECCCCeEEEEccc--CCC-------ceEEE
Q 016446 186 --HRN-KKVDFIEQFNEKLLVKQENEN-------------------LQILDVRNAELMEVSRT--EFM-------TPSAF 234 (389)
Q Consensus 186 --~~~-~~v~f~~~~~~~l~~~s~D~t-------------------IklWd~~tg~~~~~l~g--h~~-------~v~sv 234 (389)
+.+ ..+++. +..+.+..+..+++ |..||.+||+.+-.+.. |.. .+...
T Consensus 232 ~g~~~w~~~~~d-~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~ 310 (689)
T 1yiq_A 232 GGGTAWDSFAYD-PELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILA 310 (689)
T ss_dssp EECCCCSCEEEE-TTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEE
T ss_pred CCCccccceeEc-CCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEE
Confidence 111 246666 56778888877653 99999999999876543 321 11122
Q ss_pred EEcCCCc---EEEEEc-CCeEEEEeCC-CcEEEEecc-CcCCcC--------------------------------CC-C
Q 016446 235 IFLYENQ---LFLTFR-NRTVAVWNFR-GELVTSFED-HLLWHP--------------------------------DC-N 275 (389)
Q Consensus 235 ~fspdg~---~laS~s-D~tIklWd~~-G~~l~tl~g-h~~~~~--------------------------------~~-~ 275 (389)
....+|+ +++.++ +|.+.++|.. |+++...+- +..|.. .. .
T Consensus 311 d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~ 390 (689)
T 1yiq_A 311 ELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHD 390 (689)
T ss_dssp EEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSC
T ss_pred eeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccC
Confidence 2234776 788887 9999999996 998743221 000000 00 0
Q ss_pred eeEEEECCCCCEEEEEecCCCcc---------------cccC-------------------CCCCeEEEEeCCCCeEEEE
Q 016446 276 TNNIYITSDQDLIISYCKAEPED---------------QWME-------------------GSAGSINVSSILTGKCLAK 321 (389)
Q Consensus 276 v~sv~fSpdG~~laS~s~D~~~~---------------~~~~-------------------s~D~tIklWd~~tg~~l~t 321 (389)
-..++|+|+.+++...+.+-+-. .+.. ..+|+|+.||+.||+.+.+
T Consensus 391 w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~ 470 (689)
T 1yiq_A 391 WQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWE 470 (689)
T ss_dssp SSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEE
T ss_pred CCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeE
Confidence 12489999999998875431100 0000 1258999999999999999
Q ss_pred ecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEcc
Q 016446 322 INATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 322 l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
++.+. .++.-.++..|..++.|+.|+.|+.||
T Consensus 471 ~~~~~-----------------------------------~~~~g~~~tagglvf~gt~dg~l~a~D 502 (689)
T 1yiq_A 471 VPYVT-----------------------------------IFNGGTLSTAGNLVFEGSADGRVIAYA 502 (689)
T ss_dssp EEESS-----------------------------------SCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred ccCCC-----------------------------------CccCccceECCCEEEEECCCCcEEEEE
Confidence 87664 333346777889999999999999998
No 228
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.43 E-value=8.1e-11 Score=111.75 Aligned_cols=233 Identities=12% Similarity=0.070 Sum_probs=157.4
Q ss_pred ceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCC
Q 016446 33 NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVN 112 (389)
Q Consensus 33 g~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pd 112 (389)
+..+..+..+ ..+....+|+|+|+.|+.+ ...+ ..+..|+. .|+. ..|. .....+..++|+ |+
T Consensus 34 ~~~~~~l~~~-~~~~egp~~~~~g~~l~~~---d~~~------~~i~~~~~-~g~~----~~~~-~~~~~~~gl~~d-~d 96 (305)
T 3dr2_A 34 DARLLTLYDQ-ATWSEGPAWWEAQRTLVWS---DLVG------RRVLGWRE-DGTV----DVLL-DATAFTNGNAVD-AQ 96 (305)
T ss_dssp TCCCEEEECC-CSSEEEEEEEGGGTEEEEE---ETTT------TEEEEEET-TSCE----EEEE-ESCSCEEEEEEC-TT
T ss_pred CCceEEEecC-CcCccCCeEeCCCCEEEEE---ECCC------CEEEEEeC-CCCE----EEEe-CCCCccceeeEC-CC
Confidence 4455556654 3788999999999966553 2334 45666764 5653 2333 234456789998 89
Q ss_pred CeEEEEecCCCeEEEEeCCCCeEEEEec---C---CcEEEEEEc-CCceEEE----EecC----------CCCeeEEEEE
Q 016446 113 GKVLTYSAQDSIYKVFDLKNYTMLYSIS---D---KHVQEIKIS-PGIMLLI----FNRS----------SSHVPLKILS 171 (389)
Q Consensus 113 G~~Las~s~D~tiklWdl~~g~~l~tl~---~---~~V~~vafS-~g~~la~----~~~~----------s~d~tiklWd 171 (389)
|+++++...++.|.+|+.. |+...... + ..+.+++++ +|.+.++ +... .....|..+|
T Consensus 97 G~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d 175 (305)
T 3dr2_A 97 QRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLP 175 (305)
T ss_dssp SCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEEC
T ss_pred CCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEc
Confidence 9988887777899999985 76432221 1 357789999 4655543 1100 0125688888
Q ss_pred cCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCC------CcEEEEECCCCeE--EEEc-ccCCCceEEEEEcCCCcE
Q 016446 172 IEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQEN------ENLQILDVRNAEL--MEVS-RTEFMTPSAFIFLYENQL 242 (389)
Q Consensus 172 ~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D------~tIklWd~~tg~~--~~~l-~gh~~~v~sv~fspdg~~ 242 (389)
..+|+..... .......++|+ |++..|..+..+ +.|.+||+..+.+ .+.+ ......+..+++.++|++
T Consensus 176 ~~~g~~~~~~--~~~~p~gl~~s-pdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~l 252 (305)
T 3dr2_A 176 PDGSPLQRMA--DLDHPNGLAFS-PDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWL 252 (305)
T ss_dssp SSSCCCEEEE--EESSEEEEEEC-TTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCE
T ss_pred CCCCcEEEEe--cCCCCcceEEc-CCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCE
Confidence 8788765543 33556789997 777777776543 7999999976542 1111 223345667899999997
Q ss_pred EEEEcCCeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEec
Q 016446 243 FLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 293 (389)
Q Consensus 243 laS~sD~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~ 293 (389)
.++..++ |.+|+.+|+++..+..+.. +.+++|+||++.|..++.
T Consensus 253 wv~~~~g-v~~~~~~g~~~~~~~~~~~------~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 253 WSSSGTG-VCVFDSDGQLLGHIPTPGT------ASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp EECCSSE-EEEECTTSCEEEEEECSSC------CCEEEECTTSCEEEEEET
T ss_pred EEecCCc-EEEECCCCCEEEEEECCCc------eeEEEEeCCCCEEEEEcC
Confidence 7766454 9999999999988875542 579999999998887754
No 229
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.39 E-value=8.5e-12 Score=125.49 Aligned_cols=168 Identities=11% Similarity=0.046 Sum_probs=127.8
Q ss_pred CcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCe-----------EEEEEeecCCceeEEEEEecCCCeEEEEeCCCc
Q 016446 142 KHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGT-----------VLKVFYHLLHRNKKVDFIEQFNEKLLVKQENEN 209 (389)
Q Consensus 142 ~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~-----------~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~t 209 (389)
..+..+++| ..+++++++.+ .+++|+++..+ ..... .+.. +..|+| ++..|+++ .++.
T Consensus 38 ~~~nlLais~~~gll~a~~~~----~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f---d~~~L~v~-~~~~ 107 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGS----KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF---HGDQVLVS-TRNA 107 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETT----EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE---ETTEEEEE-ESSE
T ss_pred ccccEEEEcCCCCEEEEeCCC----EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE---CCCEEEEE-cCCc
Confidence 468889999 47777776543 68889876443 11122 2445 999999 57777777 9999
Q ss_pred EEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCE
Q 016446 210 LQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDL 287 (389)
Q Consensus 210 IklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~ 287 (389)
|++||+.+-.....+..|...+.++.+.+.. +|... ||+|.+||+. +.+.. + ... |.++++||+|
T Consensus 108 l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~-~---~~~-----Vs~v~WSpkG-- 174 (388)
T 1xip_A 108 LYSLDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ-L---AQN-----VTSFDVTNSQ-- 174 (388)
T ss_dssp EEEEESSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE-E---EES-----EEEEEECSSE--
T ss_pred EEEEEchhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc-c---cCC-----ceEEEEcCCc--
Confidence 9999998877666677888889998887653 66666 9999999996 77654 2 222 8999999999
Q ss_pred EEEEecCCCcccccCCCCCeEEEEeCCCCeE--EEEe------c---CCCCCCCcccccCCCCCCCccccccccceeccc
Q 016446 288 IISYCKAEPEDQWMEGSAGSINVSSILTGKC--LAKI------N---ATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTV 356 (389)
Q Consensus 288 laS~s~D~~~~~~~~s~D~tIklWd~~tg~~--l~tl------~---gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (389)
++.|+.| |+|++|+...+++ .+++ . +|.
T Consensus 175 ~~vg~~d-----------g~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~------------------------------ 213 (388)
T 1xip_A 175 LAVLLKD-----------RSFQSFAWRNGEMEKQFEFSLPSELEELPVEE------------------------------ 213 (388)
T ss_dssp EEEEETT-----------SCEEEEEEETTEEEEEEEECCCHHHHTSCTTT------------------------------
T ss_pred eEEEEcC-----------CcEEEEcCCCccccccceecCCcccccccCCC------------------------------
Confidence 5666654 9999999888887 7777 2 233
Q ss_pred ccccCCEEEEEECCCCCEEEE
Q 016446 357 GEALEDITSLFYDEERNEIYT 377 (389)
Q Consensus 357 ~~~~~~V~svafSpdg~~LaS 377 (389)
..|.+|.|.+++++|++
T Consensus 214 ----~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 214 ----YSPLSVTILSPQDFLAV 230 (388)
T ss_dssp ----SEEEEEEESSSSEEEEE
T ss_pred ----eeEEEEEEecCCeEEEE
Confidence 58999999999999987
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.38 E-value=1e-10 Score=124.90 Aligned_cols=244 Identities=11% Similarity=0.073 Sum_probs=162.0
Q ss_pred eEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEecCC-------cEEE-EEEcCCceEEEEecCC---CCeeEEEEEcC
Q 016446 105 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-------HVQE-IKISPGIMLLIFNRSS---SHVPLKILSIE 173 (389)
Q Consensus 105 ~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~~~-------~V~~-vafS~g~~la~~~~~s---~d~tiklWd~~ 173 (389)
.+++. ++ .|..++.|+.+..+|.++|+.+.++... .+.+ ..+. +.++.++.... .++.|+.+|.+
T Consensus 123 ~~a~~--~~-~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~-~~~v~v~~~~~~~~~~g~v~a~D~~ 198 (677)
T 1kb0_A 123 GVALW--KG-KVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF-KGKVIIGNGGAEYGVRGYITAYDAE 198 (677)
T ss_dssp CCEEE--TT-EEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETT
T ss_pred CceEE--CC-EEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEE-CCEEEEEecccccCCCCEEEEEECC
Confidence 35664 45 4555788999999999999998776522 2221 1222 44555543322 26899999999
Q ss_pred CCeEEEEEeecCCc--------------------------------eeEEEEEecCCCeEEEEeCCC-------------
Q 016446 174 DGTVLKVFYHLLHR--------------------------------NKKVDFIEQFNEKLLVKQENE------------- 208 (389)
Q Consensus 174 tG~~l~tl~~~~~~--------------------------------~~~v~f~~~~~~~l~~~s~D~------------- 208 (389)
||+++.++...... ...+++. ++++.+..+..++
T Consensus 199 tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d-~~~~~vy~~~~~~~~w~~~~~~~~~g 277 (677)
T 1kb0_A 199 TGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFD-AELNTMYVGTGNGSPWSHKVRSPKGG 277 (677)
T ss_dssp TCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEE-TTTTEEEEECCCEESSCHHHHSTTCC
T ss_pred CCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEc-CCCCEEEEECCCCccccCCCCCccCC
Confidence 99999888632111 0245665 5677887776553
Q ss_pred ------cEEEEECCCCeEEEEccc--CC-------CceEEEEEcCCC---cEEEEEc-CCeEEEEeCC-CcEEEEeccCc
Q 016446 209 ------NLQILDVRNAELMEVSRT--EF-------MTPSAFIFLYEN---QLFLTFR-NRTVAVWNFR-GELVTSFEDHL 268 (389)
Q Consensus 209 ------tIklWd~~tg~~~~~l~g--h~-------~~v~sv~fspdg---~~laS~s-D~tIklWd~~-G~~l~tl~gh~ 268 (389)
+|..+|.+||+.+-.+.. |. ..+.-+.+..|| ++++.++ +|.+.++|.+ |+++..++-..
T Consensus 278 d~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~ 357 (677)
T 1kb0_A 278 DNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVP 357 (677)
T ss_dssp CCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSC
T ss_pred CCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccc
Confidence 599999999999766543 32 123334445588 6788887 9999999996 99987664211
Q ss_pred -CCc----CCCC-e------------------------eEEEECCCCCEEEEEecCCCcc--------------------
Q 016446 269 -LWH----PDCN-T------------------------NNIYITSDQDLIISYCKAEPED-------------------- 298 (389)
Q Consensus 269 -~~~----~~~~-v------------------------~sv~fSpdG~~laS~s~D~~~~-------------------- 298 (389)
.+. ..|. + ..++|+|+++++...+.+-+..
T Consensus 358 ~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 437 (677)
T 1kb0_A 358 VNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSG 437 (677)
T ss_dssp CSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGG
T ss_pred cCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccc
Confidence 100 0000 0 2689999999988865431100
Q ss_pred -ccc-----------CCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEE
Q 016446 299 -QWM-----------EGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSL 366 (389)
Q Consensus 299 -~~~-----------~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~sv 366 (389)
+.- ....++|..||+.||+.+..++... .+++.
T Consensus 438 ~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-----------------------------------~~~~g 482 (677)
T 1kb0_A 438 TGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS-----------------------------------PWNGG 482 (677)
T ss_dssp GTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESS-----------------------------------SCCCC
T ss_pred cccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCC-----------------------------------CCcCc
Confidence 000 0023889999999999998886432 45556
Q ss_pred EECCCCCEEEEecCCCcEEEcc
Q 016446 367 FYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 367 afSpdg~~LaSgs~D~tIrlW~ 388 (389)
.++++|..++.|+.|+.+++||
T Consensus 483 ~~~~~g~~v~~g~~dg~l~a~D 504 (677)
T 1kb0_A 483 TLTTAGNVVFQGTADGRLVAYH 504 (677)
T ss_dssp EEEETTTEEEEECTTSEEEEEE
T ss_pred ceEeCCCEEEEECCCCcEEEEE
Confidence 7788999999999999999997
No 231
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.28 E-value=6.5e-13 Score=131.16 Aligned_cols=147 Identities=12% Similarity=0.042 Sum_probs=82.8
Q ss_pred CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCC-
Q 016446 151 PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFM- 229 (389)
Q Consensus 151 ~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~- 229 (389)
+++++++++ .|++|+.||.+||+++.+++. +.+.+..+. .++..+++++.|++|..||.++|+.+..++.+..
T Consensus 8 ~~~~v~~gs---~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~-~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~ 81 (369)
T 2hz6_A 8 PETLLFVST---LDGSLHAVSKRTGSIKWTLKE--DPVLQVPTH-VEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE 81 (369)
T ss_dssp CTTEEEEEE---TTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHH
T ss_pred eCCEEEEEc---CCCEEEEEECCCCCEEEEecC--CCceecceE-cCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcc
Confidence 466777764 347999999999999999985 455544444 3344666678999999999999998777654422
Q ss_pred ceE-EEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCC
Q 016446 230 TPS-AFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAG 306 (389)
Q Consensus 230 ~v~-sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~ 306 (389)
.+. +.++..++ +++.++ |++|..||.. |+++.++..+. .+.++|++.+|+.++.| +
T Consensus 82 ~~~~sp~~~~~~-~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---------~~~~~p~~~~v~~~~~d-----------g 140 (369)
T 2hz6_A 82 LVQASPCRSSDG-ILYMGKKQDIWYVIDLLTGEKQQTLSSAF---------ADSLSPSTSLLYLGRTE-----------Y 140 (369)
T ss_dssp HHTTCSCC------CCCCEEEEEEEEECCC-------------------------------EEEEEEE-----------E
T ss_pred ccccCceEecCC-EEEEEeCCCEEEEEECCCCcEEEEecCCC---------cccccccCCEEEEEecC-----------C
Confidence 111 11122344 556666 9999999997 99988887653 24567899999998764 8
Q ss_pred eEEEEeCCCCeEEEEecC
Q 016446 307 SINVSSILTGKCLAKINA 324 (389)
Q Consensus 307 tIklWd~~tg~~l~tl~g 324 (389)
+|+.||..+|+++..+..
T Consensus 141 ~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 141 TITMYDTKTRELRWNATY 158 (369)
T ss_dssp EEECCCSSSSSCCCEEEE
T ss_pred EEEEEECCCCCEEEeEec
Confidence 999999999998877654
No 232
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.24 E-value=9.3e-11 Score=116.98 Aligned_cols=255 Identities=10% Similarity=0.070 Sum_probs=158.0
Q ss_pred eeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEec----------CCCeEEEEeCCCCeEEEEec-C----
Q 016446 77 STKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA----------QDSIYKVFDLKNYTMLYSIS-D---- 141 (389)
Q Consensus 77 ~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s----------~D~tiklWdl~~g~~l~tl~-~---- 141 (389)
++.+.|..++++. -+...-..| .++|| |||++|..+. .+++|.+||+.+++.+.++. +
T Consensus 47 ~vsvID~~t~~v~-----~~i~vG~~P-~i~~s-pDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~ 119 (368)
T 1mda_H 47 ENWVSCAGCGVTL-----GHSLGAFLS-LAVAG-HSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119 (368)
T ss_dssp EEEEEETTTTEEE-----EEEEECTTC-EEEEC-TTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred eEEEEECCCCeEE-----EEEeCCCCC-ceEEC-CCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence 5666777777762 221222235 79998 8999877775 37899999999999998874 2
Q ss_pred ----CcEEEEEEc-CCceEEEEecCCCCeeEEE--EEcCCCeEEEEEeecCCceeEEEEEecCCC-eEEEEeCCCcEEEE
Q 016446 142 ----KHVQEIKIS-PGIMLLIFNRSSSHVPLKI--LSIEDGTVLKVFYHLLHRNKKVDFIEQFNE-KLLVKQENENLQIL 213 (389)
Q Consensus 142 ----~~V~~vafS-~g~~la~~~~~s~d~tikl--Wd~~tG~~l~tl~~~~~~~~~v~f~~~~~~-~l~~~s~D~tIklW 213 (389)
..-..++|| ||++|+++... ....+.+ +|+.+ ++++.- ... +.+. |++. ..++.+.|+++-+-
T Consensus 120 ~~~g~~P~~ia~SpDGk~lyVan~~-~~~~v~V~~iD~~t---v~~i~v--~~~--~~~~-p~g~~~~~~~~~dg~~~~v 190 (368)
T 1mda_H 120 FSVGPRVHIIGNCASSACLLFFLFG-SSAAAGLSVPGASD---DQLTKS--ASC--FHIH-PGAAATHYLGSCPASLAAS 190 (368)
T ss_dssp CCBSCCTTSEEECTTSSCEEEEECS-SSCEEEEEETTTEE---EEEEEC--SSC--CCCE-EEETTEEECCCCTTSCEEE
T ss_pred cccCCCcceEEEcCCCCEEEEEccC-CCCeEEEEEEchhh---ceEEEC--CCc--eEEc-cCCCeEEEEEcCCCCEEEE
Confidence 345689999 68888887533 1246777 99877 566642 111 1122 3343 44445789998888
Q ss_pred ECCC-----CeEEEE----cccCCCceEEEEEcCCCcEEEEEcCCeEEEEeCCC---cEEEEecc------CcCCcCCCC
Q 016446 214 DVRN-----AELMEV----SRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRG---ELVTSFED------HLLWHPDCN 275 (389)
Q Consensus 214 d~~t-----g~~~~~----l~gh~~~v~sv~fspdg~~laS~sD~tIklWd~~G---~~l~tl~g------h~~~~~~~~ 275 (389)
|+++ ++...+ +.-...+. ++.++++++.... ++|-+-|+.+ +.+.++.- ...+.+..
T Consensus 191 d~~~~~~~~~~v~~~~t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g- 265 (368)
T 1mda_H 191 DLAAAPAAAGIVGAQCTGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAG- 265 (368)
T ss_dssp ECCSSCCCCEECCCCSCTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECS-
T ss_pred ECccccccCCeEEEEeeeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCc-
Confidence 9887 554321 11112222 4555566555555 8888888853 23333311 11111100
Q ss_pred eeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecc
Q 016446 276 TNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRST 355 (389)
Q Consensus 276 v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (389)
...++|+|||++|..+...+. .+..+. ++.+.++|+.+++.++++....
T Consensus 266 ~~~v~~s~dg~~lyV~~~~~~-~~~~~~-~~~~~ViD~~t~~vv~~i~vg~----------------------------- 314 (368)
T 1mda_H 266 FQMVAKLKNTDGIMILTVEHS-RSCLAA-AENTSSVTASVGQTSGPISNGH----------------------------- 314 (368)
T ss_dssp SSCEEEETTTTEEEEEEEECS-SCTTSC-EEEEEEEESSSCCEEECCEEEE-----------------------------
T ss_pred ceeeEEcCCCCEEEEEecccc-Cccccc-CCCEEEEECCCCeEEEEEECCC-----------------------------
Confidence 123889999998876432000 000000 1244599999999999987653
Q ss_pred cccccCCEEEEEECCCCC-EEEEec-CCCcEEEccC
Q 016446 356 VGEALEDITSLFYDEERN-EIYTGN-RHGLVHVWSN 389 (389)
Q Consensus 356 ~~~~~~~V~svafSpdg~-~LaSgs-~D~tIrlW~~ 389 (389)
..+.++|+|||+ .+++.. .+++|.++|.
T Consensus 315 ------~p~gi~~s~Dg~~l~va~~~~~~~VsVID~ 344 (368)
T 1mda_H 315 ------DSDAIIAAQDGASDNYANSAGTEVLDIYDA 344 (368)
T ss_dssp ------EECEEEECCSSSCEEEEEETTTTEEEEEES
T ss_pred ------CcceEEECCCCCEEEEEccCCCCeEEEEEC
Confidence 678899999998 456666 5999999873
No 233
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.17 E-value=9.4e-09 Score=109.50 Aligned_cols=280 Identities=11% Similarity=0.114 Sum_probs=178.4
Q ss_pred eeccEEEEEecCceEEEEecccceeeeeeecCCcc---------e-EEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 11 AARDIVFALAHSGVCAAFSRETNRRICFLNVSPDE---------V-IRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 11 ~~~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~---------~-v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
..+++|.+.+.++.+..+|..||+.+=........ . -+.+++ ++..|+. +..| ..+.-
T Consensus 64 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v----~~~d------g~l~a 131 (668)
T 1kv9_A 64 FHDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYV----GTLD------GRLIA 131 (668)
T ss_dssp EETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEE----ECTT------SEEEE
T ss_pred EECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEE----EcCC------CEEEE
Confidence 34788888999999999999999998776543210 0 123333 3455555 3455 56666
Q ss_pred eEeccCCCCCcceeEeeecccC-----ce-eEEEecCCCeEEEEecC-----CCeEEEEeCCCCeEEEEecC---C----
Q 016446 81 EYIRRGKPDSGFALFESESLKW-----PG-FVEFDDVNGKVLTYSAQ-----DSIYKVFDLKNYTMLYSISD---K---- 142 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~~~~~~~-----~~-~v~Fs~pdG~~Las~s~-----D~tiklWdl~~g~~l~tl~~---~---- 142 (389)
.|..+|+. +|....... +. +-.. .+|++++..+. ++.|..+|+++|+++.++.. .
T Consensus 132 lD~~tG~~-----~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~ 204 (668)
T 1kv9_A 132 LDAKTGKA-----IWSQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALP 204 (668)
T ss_dssp EETTTCCE-----EEEEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSC
T ss_pred EECCCCCE-----eeeeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCcc
Confidence 77788887 666332110 11 1112 15776665432 68999999999999877641 1
Q ss_pred -------------------------cE-EEEEEcC-CceEEEEecCCC------------C----eeEEEEEcCCCeEEE
Q 016446 143 -------------------------HV-QEIKISP-GIMLLIFNRSSS------------H----VPLKILSIEDGTVLK 179 (389)
Q Consensus 143 -------------------------~V-~~vafS~-g~~la~~~~~s~------------d----~tiklWd~~tG~~l~ 179 (389)
.+ ..+++.| ++++..+..+.. | ..|.-+|+.||+.+-
T Consensus 205 ~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W 284 (668)
T 1kv9_A 205 YEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAW 284 (668)
T ss_dssp CSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEE
T ss_pred ccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceee
Confidence 01 1367874 566666532210 0 149999999999999
Q ss_pred EEeecCCce------eE-EEE-EecCCC---eEEEEeCCCcEEEEECCCCeEEEEcccCCC-ce----------------
Q 016446 180 VFYHLLHRN------KK-VDF-IEQFNE---KLLVKQENENLQILDVRNAELMEVSRTEFM-TP---------------- 231 (389)
Q Consensus 180 tl~~~~~~~------~~-v~f-~~~~~~---~l~~~s~D~tIklWd~~tg~~~~~l~gh~~-~v---------------- 231 (389)
.++...+.. .. +.+ ...++. .++.++.++.+.++|.++|+++...+-... +.
T Consensus 285 ~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~ 364 (668)
T 1kv9_A 285 HYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGV 364 (668)
T ss_dssp EEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTT
T ss_pred EeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccc
Confidence 887421111 11 111 112343 466788999999999999998743221110 00
Q ss_pred -------------------EEEEEcCCCcEEEE------------------------------------Ec-CCeEEEEe
Q 016446 232 -------------------SAFIFLYENQLFLT------------------------------------FR-NRTVAVWN 255 (389)
Q Consensus 232 -------------------~sv~fspdg~~laS------------------------------------~s-D~tIklWd 255 (389)
..++|+|+..++.. .. +++|..||
T Consensus 365 ~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D 444 (668)
T 1kv9_A 365 RYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWD 444 (668)
T ss_dssp TCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEE
T ss_pred cccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEe
Confidence 12678887666542 12 48899999
Q ss_pred CC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCC
Q 016446 256 FR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATN 326 (389)
Q Consensus 256 ~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~ 326 (389)
+. |+.+-..+.+.. ++...++..|.+++.++. |+.++.||..+|+.+..++...
T Consensus 445 ~~tG~~~W~~~~~~~------~~~~~~~t~gg~vf~g~~-----------dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 445 PVKQKAAWKVPYPTH------WNGGTLSTAGNLVFQGTA-----------AGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp TTTTEEEEEEEESSS------CCCCEEEETTTEEEEECT-----------TSEEEEEETTTCCEEEEEECSS
T ss_pred CCCCcEEEEccCCCC------CcCceeEeCCCEEEEECC-----------cccchhhhhhcChhheEecCCC
Confidence 96 998877764433 244455667888888865 5999999999999999987654
No 234
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.15 E-value=2.9e-08 Score=96.21 Aligned_cols=256 Identities=9% Similarity=0.050 Sum_probs=159.1
Q ss_pred EEeeccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCC
Q 016446 9 IVAARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKP 88 (389)
Q Consensus 9 i~~~~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~ 88 (389)
+...++.|.+++.++.+..+|.++|+.+-...... ....+... .+| .|+. +..+ ..+...|..+|+.
T Consensus 99 ~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~-~~~~~p~~-~~~-~v~v----~~~~------g~l~~~d~~tG~~ 165 (376)
T 3q7m_A 99 VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAG-EALSRPVV-SDG-LVLI----HTSN------GQLQALNEADGAV 165 (376)
T ss_dssp EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSS-CCCSCCEE-ETT-EEEE----ECTT------SEEEEEETTTCCE
T ss_pred ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCC-ceEcCCEE-ECC-EEEE----EcCC------CeEEEEECCCCcE
Confidence 34448889999999999999999999887766542 22222222 244 4444 3455 5666777788876
Q ss_pred CCcceeEeeecccCc------eeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEecCC-c-----------E-EEEEE
Q 016446 89 DSGFALFESESLKWP------GFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-H-----------V-QEIKI 149 (389)
Q Consensus 89 ~~~~~l~~~~~~~~~------~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~~~-~-----------V-~~vaf 149 (389)
+|.......+ ...... +|. |..+..++.+..+|+++|+.+...... . + ....+
T Consensus 166 -----~W~~~~~~~~~~~~~~~~~~~~--~~~-v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~ 237 (376)
T 3q7m_A 166 -----KWTVNLDMPSLSLRGESAPTTA--FGA-AVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV 237 (376)
T ss_dssp -----EEEEECCC-----CCCCCCEEE--TTE-EEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE
T ss_pred -----EEEEeCCCCceeecCCCCcEEE--CCE-EEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE
Confidence 5553322111 123332 454 555778999999999999988766421 0 1 11122
Q ss_pred cCCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEccc-CC
Q 016446 150 SPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT-EF 228 (389)
Q Consensus 150 S~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~g-h~ 228 (389)
. +..+..++ .++.+..+|.++|+.+..... .....+. .+++.+.++..++.|..+|.++|+.+..... ..
T Consensus 238 ~-~~~v~~~~---~~g~l~~~d~~tG~~~w~~~~--~~~~~~~---~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~ 308 (376)
T 3q7m_A 238 V-NGVVFALA---YNGNLTALDLRSGQIMWKREL--GSVNDFI---VDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLH 308 (376)
T ss_dssp E-TTEEEEEC---TTSCEEEEETTTCCEEEEECC--CCEEEEE---EETTEEEEEETTCCEEEEETTTCCEEEEECTTTT
T ss_pred E-CCEEEEEe---cCcEEEEEECCCCcEEeeccC--CCCCCce---EECCEEEEEcCCCeEEEEECCCCcEEEeecccCC
Confidence 2 44555543 346899999999999987762 2333333 3478899999999999999999998766542 22
Q ss_pred CceEEEEEcCCCcEEEEEcCCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCe
Q 016446 229 MTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGS 307 (389)
Q Consensus 229 ~~v~sv~fspdg~~laS~sD~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~t 307 (389)
..+.+.+. .++.+++...+|.+..+|.. |+++..++...... .....+ .+|+ |..++. +|.
T Consensus 309 ~~~~~~~~-~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~----~~~~~~-~~~~-l~v~~~-----------~G~ 370 (376)
T 3q7m_A 309 RLLTSPVL-YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGF----QTEPVA-ADGK-LLIQAK-----------DGT 370 (376)
T ss_dssp SCCCCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCB----CSCCEE-ETTE-EEEEBT-----------TSC
T ss_pred CcccCCEE-ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcc----eeCCEE-ECCE-EEEEeC-----------CCE
Confidence 22222322 24555544449999999986 99987776432221 112222 2444 454544 488
Q ss_pred EEEEe
Q 016446 308 INVSS 312 (389)
Q Consensus 308 IklWd 312 (389)
|..+|
T Consensus 371 l~~~~ 375 (376)
T 3q7m_A 371 VYSIT 375 (376)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88886
No 235
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.12 E-value=8.1e-08 Score=100.55 Aligned_cols=279 Identities=12% Similarity=0.049 Sum_probs=172.8
Q ss_pred eccEEEEEec-CceEEEEec-ccceeeeeeecCCcce----------EEEEEEeeCCCEEEEEEEeecCCCcceeeeeee
Q 016446 12 ARDIVFALAH-SGVCAAFSR-ETNRRICFLNVSPDEV----------IRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 79 (389)
Q Consensus 12 ~~~~~a~~~~-~gtiklW~~-~tg~~l~tl~~~~~~~----------v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~ 79 (389)
.+++|.+.+. ++.+...|. +||+.+=......... -+++++ ++..|+. +..| ..+.
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v----~~~d------g~l~ 128 (571)
T 2ad6_A 61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVK----KQAN------GHLL 128 (571)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEE----ECTT------SEEE
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEE----EeCC------CEEE
Confidence 4777888888 899999999 8999886654432110 123333 3455555 3345 4566
Q ss_pred EeEeccCCCCCcceeEeeeccc-----Ccee-EEEecCCCeEEEEecC-----CCeEEEEeCCCCeEEEEecC-Cc----
Q 016446 80 IEYIRRGKPDSGFALFESESLK-----WPGF-VEFDDVNGKVLTYSAQ-----DSIYKVFDLKNYTMLYSISD-KH---- 143 (389)
Q Consensus 80 l~~i~~g~~~~~~~l~~~~~~~-----~~~~-v~Fs~pdG~~Las~s~-----D~tiklWdl~~g~~l~tl~~-~~---- 143 (389)
..|..+|+. +|...... .+.+ -... +|++++..+. |+.|..+|+++|+++.++.. ..
T Consensus 129 alD~~tG~~-----~W~~~~~~~~~~~~~~~~P~v~--~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~ 201 (571)
T 2ad6_A 129 ALDAKTGKI-----NWEVEVCDPKVGSTLTQAPFVA--KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSV 201 (571)
T ss_dssp EEETTTCCE-----EEEEECCCGGGTCBCCSCCEEE--TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHH
T ss_pred EEECCCCCE-----EEEecCCCCCccceeccCCEEE--CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCcccc
Confidence 667788887 56533221 1111 1122 6777665543 89999999999999877652 11
Q ss_pred ----------------------------------E-EEEEEcC-CceEEEEecCC---------CC----eeEEEEEcCC
Q 016446 144 ----------------------------------V-QEIKISP-GIMLLIFNRSS---------SH----VPLKILSIED 174 (389)
Q Consensus 144 ----------------------------------V-~~vafS~-g~~la~~~~~s---------~d----~tiklWd~~t 174 (389)
+ ..+++.+ ..++..+.... .| ..|.-+|..|
T Consensus 202 ~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~t 281 (571)
T 2ad6_A 202 RLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDT 281 (571)
T ss_dssp TBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTT
T ss_pred ccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCC
Confidence 1 1255653 44554443211 12 3699999999
Q ss_pred CeEEEEEeecCC------ceeE-EEEE-ecCCC---eEEEEeCCCcEEEEECCCCeEEEEcccCC-------------Cc
Q 016446 175 GTVLKVFYHLLH------RNKK-VDFI-EQFNE---KLLVKQENENLQILDVRNAELMEVSRTEF-------------MT 230 (389)
Q Consensus 175 G~~l~tl~~~~~------~~~~-v~f~-~~~~~---~l~~~s~D~tIklWd~~tg~~~~~l~gh~-------------~~ 230 (389)
|+.+-.++...+ ...+ +.+. .+++. .++.++.++.+.+.|.++|+.+...+-.. .+
T Consensus 282 G~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p 361 (571)
T 2ad6_A 282 GMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTP 361 (571)
T ss_dssp CCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSE
T ss_pred CcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCce
Confidence 999988873211 1112 2221 12342 34557899999999999999876543211 01
Q ss_pred e--------------------------EEEEEcCCCcEEEEEc-------------------------------------
Q 016446 231 P--------------------------SAFIFLYENQLFLTFR------------------------------------- 247 (389)
Q Consensus 231 v--------------------------~sv~fspdg~~laS~s------------------------------------- 247 (389)
+ ..++|+|++.+|....
T Consensus 362 ~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~ 441 (571)
T 2ad6_A 362 VRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKK 441 (571)
T ss_dssp EECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSC
T ss_pred ecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCC
Confidence 1 2467888877665442
Q ss_pred -CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCC
Q 016446 248 -NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 325 (389)
Q Consensus 248 -D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH 325 (389)
++.|..||.. |+.+-+++.... +.+..+...|.++..++. |+.|+.+|..||+++.+++-.
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~~------~~~~~~~t~gg~v~~g~~-----------dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKFA------AWGGTLYTKGGLVWYATL-----------DGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSC------CCSBCEEETTTEEEEECT-----------TSEEEEEETTTCCEEEEEECS
T ss_pred CCCeEEEEECCCCCEEEEecCCCC------ccceeEEECCCEEEEEcC-----------CCeEEEEECCCCCEEEEEeCC
Confidence 4789999996 998877753322 233333445566666655 599999999999999998754
Q ss_pred C
Q 016446 326 N 326 (389)
Q Consensus 326 ~ 326 (389)
.
T Consensus 505 ~ 505 (571)
T 2ad6_A 505 S 505 (571)
T ss_dssp S
T ss_pred C
Confidence 3
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.09 E-value=3e-09 Score=111.89 Aligned_cols=261 Identities=10% Similarity=0.056 Sum_probs=163.8
Q ss_pred EEEEecCceEEEEecccceeeeeeecCC--------------------------------------cceEEEEEEee---
Q 016446 16 VFALAHSGVCAAFSRETNRRICFLNVSP--------------------------------------DEVIRSLFYNK--- 54 (389)
Q Consensus 16 ~a~~~~~gtiklW~~~tg~~l~tl~~~~--------------------------------------~~~v~sv~~sp--- 54 (389)
+.++.++|.++++-+-++++|+.+.--. ..-..-++.|.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 5678889999998888888777532110 00011255666
Q ss_pred --CCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEec-CCCeEEEEec-----------
Q 016446 55 --NNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDD-VNGKVLTYSA----------- 120 (389)
Q Consensus 55 --dg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~-pdG~~Las~s----------- 120 (389)
||++|-.. ..++ ..+.+-|+.+.+++. +........|..++|.. ||++++..++
T Consensus 98 ~~DG~~lfVn---d~~~------~rVavIdl~t~~~~~---ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~ 165 (595)
T 1fwx_A 98 KYDGRFLFMN---DKAN------TRVARVRCDVMKCDA---ILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGT 165 (595)
T ss_dssp EEEEEEEEEE---ETTT------TEEEEEETTTTEEEE---EEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSS
T ss_pred CcCCCEEEEE---cCCC------CEEEEEECCCceEee---EEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCc
Confidence 77766552 1233 334444555555421 11111112345678755 7888887773
Q ss_pred -------CCCeEEEEeCCCCeEEEEec-CCcEEEEEEc-CCceEEEEecCCCC------------eeEEEEEcCCCeEEE
Q 016446 121 -------QDSIYKVFDLKNYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRSSSH------------VPLKILSIEDGTVLK 179 (389)
Q Consensus 121 -------~D~tiklWdl~~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~s~d------------~tiklWd~~tG~~l~ 179 (389)
.++++-+.|.++.+.+.++. +..-..+++| +|.++.+++..++. ..|.+-|+...+
T Consensus 166 ~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~--- 242 (595)
T 1fwx_A 166 NMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE--- 242 (595)
T ss_dssp STTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH---
T ss_pred ccccccccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecccee---
Confidence 36689999999999888776 3445668899 68888888766532 234444432211
Q ss_pred EEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCC--CeE-EEEcccCCCceEEEEEcCCCcEEEEEc--CCeEEEE
Q 016446 180 VFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRN--AEL-MEVSRTEFMTPSAFIFLYENQLFLTFR--NRTVAVW 254 (389)
Q Consensus 180 tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~t--g~~-~~~l~gh~~~v~sv~fspdg~~laS~s--D~tIklW 254 (389)
++. ++|..... +.|.+.|.++ ++. +.++.- ...+..+.|+|||+++..+. +.+|-+.
T Consensus 243 ------------~~v-~~Gk~~~i----~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVi 304 (595)
T 1fwx_A 243 ------------KAI-AAGDYQEL----NGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVL 304 (595)
T ss_dssp ------------HHH-HHTCSEEE----TTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEE
T ss_pred ------------Eec-cCCCeeEE----CcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEE
Confidence 111 33443332 5699999998 655 444322 13567799999999887775 9999999
Q ss_pred eCC-Cc------------EEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCC------
Q 016446 255 NFR-GE------------LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILT------ 315 (389)
Q Consensus 255 d~~-G~------------~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~t------ 315 (389)
|+. .+ .+.+++--.. -+.++|+||| ++-+... -|++|-.||+.+
T Consensus 305 d~~~~~~~~~~~l~~~~~v~~~v~vG~g------P~h~aF~~dG-~aY~t~~----------ldsqV~kwdi~~a~~~~~ 367 (595)
T 1fwx_A 305 DVTRFDAVFYENADPRSAVVAEPELGLG------PLHTAFDGRG-NAYTSLF----------LDSQVVKWNIEDAIRAYA 367 (595)
T ss_dssp EGGGHHHHHHSCCCGGGGEEECCBCCSC------EEEEEECTTS-EEEEEET----------TTTEEEEEEHHHHHHHHH
T ss_pred ECcccccccccccCcccceEEEcCCCCC------cceEEECCCC-eEEEEEe----------cCCcEEEEEhhHhhhhhc
Confidence 997 32 3444443233 3899999999 5555443 358999999987
Q ss_pred ----CeEEEEecCCC
Q 016446 316 ----GKCLAKINATN 326 (389)
Q Consensus 316 ----g~~l~tl~gH~ 326 (389)
.+.+.++.-|-
T Consensus 368 g~~~~~vi~kidV~y 382 (595)
T 1fwx_A 368 GEKVDPIKDKLDVHY 382 (595)
T ss_dssp TCSCCCEEEEEECSS
T ss_pred ccccceeEEEeeccc
Confidence 56788887764
No 237
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.07 E-value=2.4e-08 Score=106.36 Aligned_cols=267 Identities=13% Similarity=0.099 Sum_probs=164.8
Q ss_pred eeeEeEeccCCCCCcceeEeeecccC------------ceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEecC---
Q 016446 77 STKIEYIRRGKPDSGFALFESESLKW------------PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--- 141 (389)
Q Consensus 77 ~~~l~~i~~g~~~~~~~l~~~~~~~~------------~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~~--- 141 (389)
.+.-.|..+|+. +|..+.... ...+++. +++ |..++.|+.|.-+|.++|+++.+...
T Consensus 77 ~v~AlD~~tG~~-----~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-v~v~~~dg~l~alD~~tG~~~W~~~~~~~ 148 (668)
T 1kv9_A 77 RVIAVDAASGKE-----LWRYDPEVAKVKARTSCCDAVNRGVALW--GDK-VYVGTLDGRLIALDAKTGKAIWSQQTTDP 148 (668)
T ss_dssp EEEEEETTTCCE-----EEEECCCCCGGGGGGCTTCSCCCCCEEE--BTE-EEEECTTSEEEEEETTTCCEEEEEECSCT
T ss_pred eEEEEECCCChh-----ceEECCCCCccccccccccCCccceEEE--CCE-EEEEcCCCEEEEEECCCCCEeeeeccCCC
Confidence 444566678876 665331110 1234554 454 55567899999999999999876642
Q ss_pred ---CcEEE-EEEcCCceEEEEecCC---CCeeEEEEEcCCCeEEEEEeecC-C---------------------------
Q 016446 142 ---KHVQE-IKISPGIMLLIFNRSS---SHVPLKILSIEDGTVLKVFYHLL-H--------------------------- 186 (389)
Q Consensus 142 ---~~V~~-vafS~g~~la~~~~~s---~d~tiklWd~~tG~~l~tl~~~~-~--------------------------- 186 (389)
..+.+ ..+. +.+++++.... .++.|.-+|.+||+++-++.... .
T Consensus 149 ~~~~~~~~~P~v~-~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~ 227 (668)
T 1kv9_A 149 AKPYSITGAPRVV-KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGG 227 (668)
T ss_dssp TSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCE
T ss_pred CCcceecCCCEEE-CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCC
Confidence 11211 1122 44554543321 25899999999999999886210 0
Q ss_pred ---ceeEEEEEecCCCeEEEEeCCC-------------------cEEEEECCCCeEEEEccc--CC-------CceEEEE
Q 016446 187 ---RNKKVDFIEQFNEKLLVKQENE-------------------NLQILDVRNAELMEVSRT--EF-------MTPSAFI 235 (389)
Q Consensus 187 ---~~~~v~f~~~~~~~l~~~s~D~-------------------tIklWd~~tg~~~~~l~g--h~-------~~v~sv~ 235 (389)
....+++. +..+.+..+..++ .|..+|.+||+.+-.++. |. ..+....
T Consensus 228 gg~~w~~~a~d-~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d 306 (668)
T 1kv9_A 228 GGTVWDSMAYD-PELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAE 306 (668)
T ss_dssp ECCCCSCEEEE-TTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEE
T ss_pred CCccccceEEc-CCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEE
Confidence 01235665 4567777776665 499999999999776543 33 1222223
Q ss_pred EcCCCc---EEEEEc-CCeEEEEeCC-CcEEEEeccCc-CCcC-------------C----------------C-CeeEE
Q 016446 236 FLYENQ---LFLTFR-NRTVAVWNFR-GELVTSFEDHL-LWHP-------------D----------------C-NTNNI 279 (389)
Q Consensus 236 fspdg~---~laS~s-D~tIklWd~~-G~~l~tl~gh~-~~~~-------------~----------------~-~v~sv 279 (389)
+..||+ +++.++ +|.+.++|.. |+++...+-.. .|.. . . .=..+
T Consensus 307 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~ 386 (668)
T 1kv9_A 307 LNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSM 386 (668)
T ss_dssp EEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCC
T ss_pred eccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcc
Confidence 344776 677777 9999999996 99885433211 0000 0 0 00137
Q ss_pred EECCCCCEEEEEecCCC-----c-------cc--c-----------cCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccc
Q 016446 280 YITSDQDLIISYCKAEP-----E-------DQ--W-----------MEGSAGSINVSSILTGKCLAKINATNCSPKVDDE 334 (389)
Q Consensus 280 ~fSpdG~~laS~s~D~~-----~-------~~--~-----------~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~ 334 (389)
+|+|+.+++.....+-+ + .. . ....+|+|+-||+.||+.+.....+.
T Consensus 387 a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-------- 458 (668)
T 1kv9_A 387 SFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-------- 458 (668)
T ss_dssp EEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS--------
T ss_pred eECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC--------
Confidence 89998777665332110 0 00 0 12245899999999999998876543
Q ss_pred cCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEcc
Q 016446 335 LGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
.++...+...|..|+.|+.|+.++.||
T Consensus 459 ---------------------------~~~~~~~~t~gg~vf~g~~dg~l~a~d 485 (668)
T 1kv9_A 459 ---------------------------HWNGGTLSTAGNLVFQGTAAGQMHAYS 485 (668)
T ss_dssp ---------------------------SCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred ---------------------------CCcCceeEeCCCEEEEECCcccchhhh
Confidence 233345566788899999999999987
No 238
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.07 E-value=4.9e-08 Score=93.32 Aligned_cols=216 Identities=12% Similarity=0.082 Sum_probs=138.1
Q ss_pred CeEEEEec-C--CcEEEEEEcCCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEe-CCC
Q 016446 133 YTMLYSIS-D--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ-ENE 208 (389)
Q Consensus 133 g~~l~tl~-~--~~V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s-~D~ 208 (389)
++.+.+++ + .....++|+|+++|..++....+.+|+..|++||+.++++.-. .+.+...+. ++++.+.... .++
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~-~~~fgeGi~-~~g~~lyv~t~~~~ 86 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMD-DSYFGEGLT-LLNEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECC-TTCCEEEEE-EETTEEEEEETTCS
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecC-CCcceEEEE-EeCCEEEEEEecCC
Confidence 44566665 2 3578999996346666643334579999999999999998722 222222332 3366776655 889
Q ss_pred cEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCC
Q 016446 209 NLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD 286 (389)
Q Consensus 209 tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~ 286 (389)
++-++|.++++.+.++.-.... ...++|||+.|..+. +++|.+.|.. .+.++++.--....+-...+.+.|. ||+
T Consensus 87 ~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~ 163 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE 163 (266)
T ss_dssp EEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE
Confidence 9999999999999887532111 234667877666665 8899999996 7877777621110010125788888 887
Q ss_pred EEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEE
Q 016446 287 LIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSL 366 (389)
Q Consensus 287 ~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~sv 366 (389)
..|.... +++|-+-|..+|+.+.++.-....+ ...............+
T Consensus 164 lyvn~~~-----------~~~V~vID~~tg~V~~~I~~~g~~~---------------------~~~~~~~~~~~v~nGI 211 (266)
T 2iwa_A 164 VWANIWQ-----------TDCIARISAKDGTLLGWILLPNLRK---------------------KLIDEGFRDIDVLNGI 211 (266)
T ss_dssp EEEEETT-----------SSEEEEEETTTCCEEEEEECHHHHH---------------------HHHHTTCTTCCCEEEE
T ss_pred EEEecCC-----------CCeEEEEECCCCcEEEEEECCCccc---------------------ccccccccccCceEEE
Confidence 6665422 4799999999999999986321000 0000000001367899
Q ss_pred EECCCCCEEEE-ecCCCcEE
Q 016446 367 FYDEERNEIYT-GNRHGLVH 385 (389)
Q Consensus 367 afSpdg~~LaS-gs~D~tIr 385 (389)
+|+|||+.|+. +....+|.
T Consensus 212 a~~~~~~~lfVTgk~~~~v~ 231 (266)
T 2iwa_A 212 AWDQENKRIFVTGKLWPKLF 231 (266)
T ss_dssp EEETTTTEEEEEETTCSEEE
T ss_pred EEcCCCCEEEEECCCCCeEE
Confidence 99999976554 44555543
No 239
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.07 E-value=1.9e-08 Score=94.50 Aligned_cols=256 Identities=10% Similarity=0.052 Sum_probs=165.8
Q ss_pred EEEEee-ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEecc
Q 016446 7 IEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRR 85 (389)
Q Consensus 7 ~~i~~~-~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~ 85 (389)
..+... +..|.++..+ +..+|. +|+.+..+.... ....+.++. +|. |.. +..+ ..+...+..
T Consensus 63 ~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~~~~~-~~~~~~~~~-~~~-l~v----~t~~------~~l~~~d~~- 125 (330)
T 3hxj_A 63 CRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRFDTKK-AIVSDFTIF-EDI-LYV----TSMD------GHLYAINTD- 125 (330)
T ss_dssp ECCEETTTTEECCSSCE--EEEECC-CGGGGGGSCC------CCEEEE-TTE-EEE----ECTT------SEEEEECTT-
T ss_pred cceEEecCCcEEEecCc--EEEECC-CCcEEEEEECCC-CcccCceEE-CCE-EEE----EecC------CEEEEEcCC-
Confidence 445554 5566666666 777887 687776555432 333344443 444 444 2344 445555544
Q ss_pred CCCCCcceeEeeec-ccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEEEc-CCceEEEEecC
Q 016446 86 GKPDSGFALFESES-LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKIS-PGIMLLIFNRS 161 (389)
Q Consensus 86 g~~~~~~~l~~~~~-~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~--~~~V~~vafS-~g~~la~~~~~ 161 (389)
|+. +|.... ...+.++.++ ++|.+++ ++.++.|..+|.+ |+.+..+. ...+.++.+. +|... .+.
T Consensus 126 g~~-----~~~~~~~~~~~~~~~~~-~~g~l~v-gt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~-v~t-- 194 (330)
T 3hxj_A 126 GTE-----KWRFKTKKAIYATPIVS-EDGTIYV-GSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIY-FGS-- 194 (330)
T ss_dssp SCE-----EEEEECSSCCCSCCEEC-TTSCEEE-ECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEE-EES--
T ss_pred CCE-----EEEEcCCCceeeeeEEc-CCCEEEE-EcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEE-EEe--
Confidence 654 343221 1123446665 6887655 6778999999998 88776554 4567778886 55544 443
Q ss_pred CCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCc
Q 016446 162 SSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ 241 (389)
Q Consensus 162 s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~ 241 (389)
+.|..+| .+|+.+..+......+..+... + ++.+.++..++.|..+|. +|+.+..+......+.++++.++|+
T Consensus 195 ---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~-~-~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~ 267 (330)
T 3hxj_A 195 ---DKVYAIN-PDGTEKWNFYAGYWTVTRPAIS-E-DGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDT 267 (330)
T ss_dssp ---SSEEEEC-TTSCEEEEECCSSCCCSCCEEC-T-TSCEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSC
T ss_pred ---CEEEEEC-CCCcEEEEEccCCcceeceEEC-C-CCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCe
Confidence 4689999 8999888877544556666653 2 457888888888888885 6766666555555556677778898
Q ss_pred EEEEEcCCeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCC
Q 016446 242 LFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL 314 (389)
Q Consensus 242 ~laS~sD~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~ 314 (389)
+.+...++.|..+|.+|+.+..+.-... .+.++++.++|++.+. + .+|.+++-..+
T Consensus 268 l~v~t~~ggl~~~d~~g~~~~~~~~~~~-----~~~~~~~d~~g~l~~g-t-----------~~G~~~~~~~~ 323 (330)
T 3hxj_A 268 IYFGSYDGHLYAINPDGTEKWNFETGSW-----IIATPVIDENGTIYFG-T-----------RNGKFYALFNL 323 (330)
T ss_dssp EEEECTTCEEEEECTTSCEEEEEECSSC-----CCSCCEECTTCCEEEE-C-----------TTSCEEEEEC-
T ss_pred EEEecCCCCEEEECCCCcEEEEEEcCCc-----cccceEEcCCCEEEEE-c-----------CCCeEEEEecc
Confidence 8776668888899988888777654332 2678899999998885 3 35889887644
No 240
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.05 E-value=5.3e-08 Score=93.06 Aligned_cols=194 Identities=10% Similarity=0.011 Sum_probs=140.6
Q ss_pred ceeEEEecCCCeEEEEecC--CCeEEEEeCCCCeEEEEec-C--CcEEEEEEcCCceEEEEecCCCCeeEEEEEcCCCeE
Q 016446 103 PGFVEFDDVNGKVLTYSAQ--DSIYKVFDLKNYTMLYSIS-D--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTV 177 (389)
Q Consensus 103 ~~~v~Fs~pdG~~Las~s~--D~tiklWdl~~g~~l~tl~-~--~~V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~ 177 (389)
+..++|+ |||++.++.+. +++|++.|+++|+.+.++. . .....+++. |+.|..+.. .++++-++|.+|++.
T Consensus 23 ~~Gl~~~-~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~-g~~lyv~t~--~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 23 TQGLVYA-ENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL-NEKLYQVVW--LKNIGFIYDRRTLSN 98 (266)
T ss_dssp EEEEEEC-STTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEET--TCSEEEEEETTTTEE
T ss_pred cccEEEe-CCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe-CCEEEEEEe--cCCEEEEEECCCCcE
Confidence 3569998 88988887764 6899999999999988875 2 244566776 456666643 457999999999999
Q ss_pred EEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccC-----CCceEEEEEcCCCcEEEEEc-CCeE
Q 016446 178 LKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTE-----FMTPSAFIFLYENQLFLTFR-NRTV 251 (389)
Q Consensus 178 l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh-----~~~v~sv~fspdg~~laS~s-D~tI 251 (389)
+.+++.-.+.-+. +. ++++++.++..+++|.+.|.++.+.+.++.-. -..++.+.|. +|++.+... +++|
T Consensus 99 ~~~i~~g~~~g~g--lt-~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V 174 (266)
T 2iwa_A 99 IKNFTHQMKDGWG--LA-TDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCI 174 (266)
T ss_dssp EEEEECCSSSCCE--EE-ECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEE
T ss_pred EEEEECCCCCeEE--EE-ECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeE
Confidence 9999732122233 33 57888888777899999999998887765421 1247788888 889888887 8899
Q ss_pred EEEeCC-CcEEEEeccCc--------CCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCC
Q 016446 252 AVWNFR-GELVTSFEDHL--------LWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSIL 314 (389)
Q Consensus 252 klWd~~-G~~l~tl~gh~--------~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~ 314 (389)
-+=|.. |+.+.++.-.. ........+.|+|+|||++|..++.. .+++..-++.
T Consensus 175 ~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~----------~~~v~~i~l~ 236 (266)
T 2iwa_A 175 ARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL----------WPKLFEIKLH 236 (266)
T ss_dssp EEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT----------CSEEEEEEEE
T ss_pred EEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC----------CCeEEEEEEe
Confidence 999996 99988886210 00001125899999999888777643 3666666654
No 241
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.04 E-value=4.8e-07 Score=85.97 Aligned_cols=222 Identities=9% Similarity=0.061 Sum_probs=138.9
Q ss_pred cCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec-CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEE
Q 016446 101 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVL 178 (389)
Q Consensus 101 ~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l 178 (389)
.++..++++ |+|+++++...++.|..||... +....+. ......++|. +|.. .++........|..+|..+|+..
T Consensus 32 ~~pegia~~-~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l-~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 32 TFLENLASA-PDGTIFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDL-VATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CCEEEEEEC-TTSCEEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCE-EEEEECTTSCEEEEEECTTSCEE
T ss_pred CCcceEEEC-CCCCEEEEeCCCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcE-EEEeccCCcceEEEEcCCCCeEE
Confidence 456789998 8999988888899999999754 4443343 4678999999 5664 44432221234666777888865
Q ss_pred EEEee-cCCceeEEEEEecCCCeEEEE-eCCCcEEEEECCCCeE-EE---------EcccCCCceEEEEEcCCCcE-EEE
Q 016446 179 KVFYH-LLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAEL-ME---------VSRTEFMTPSAFIFLYENQL-FLT 245 (389)
Q Consensus 179 ~tl~~-~~~~~~~v~f~~~~~~~l~~~-s~D~tIklWd~~tg~~-~~---------~l~gh~~~v~sv~fspdg~~-laS 245 (389)
..... .......+++. .+..++.. ..++.|...|..+++. +. ...+.....+.+ +|||+. .++
T Consensus 109 ~~~~~~~~~~~~g~~~~--~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~ 184 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPL--SDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVS 184 (306)
T ss_dssp EEEECTTCSCEEEEEES--SSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEE
T ss_pred EEEeCCCccccCccccc--CCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEE
Confidence 43321 11122334432 24455554 4688999999876532 11 111222345666 888864 455
Q ss_pred Ec-CCeEEEEeCC--CcE--EEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEE
Q 016446 246 FR-NRTVAVWNFR--GEL--VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLA 320 (389)
Q Consensus 246 ~s-D~tIklWd~~--G~~--l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~ 320 (389)
-. .+.|..++++ |++ ...+..-.. -..++++|||++.++... .+.|..+|. .|+...
T Consensus 185 d~~~~~I~~~~~~~~g~~~~~~~~~~~~~------P~gi~vd~dG~l~va~~~-----------~~~V~~~~~-~G~~~~ 246 (306)
T 2p4o_A 185 NTEKMLLLRIPVDSTDKPGEPEIFVEQTN------IDDFAFDVEGNLYGATHI-----------YNSVVRIAP-DRSTTI 246 (306)
T ss_dssp ETTTTEEEEEEBCTTSCBCCCEEEEESCC------CSSEEEBTTCCEEEECBT-----------TCCEEEECT-TCCEEE
T ss_pred eCCCCEEEEEEeCCCCCCCccEEEeccCC------CCCeEECCCCCEEEEeCC-----------CCeEEEECC-CCCEEE
Confidence 56 8899999986 432 222221112 258999999998887533 378999995 487643
Q ss_pred E--ecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEEC---CCCCEEEEecCC
Q 016446 321 K--INATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYD---EERNEIYTGNRH 381 (389)
Q Consensus 321 t--l~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafS---pdg~~LaSgs~D 381 (389)
. +... ....++++|. ||+++|+-++..
T Consensus 247 ~~~~~~~----------------------------------~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 247 IAQAEQG----------------------------------VIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EECGGGT----------------------------------CTTEEEEEECCSTTTTTEEEEEECT
T ss_pred Eeecccc----------------------------------cCCceEEEEecccCCCCEEEEECCC
Confidence 2 2211 1478999999 998888776643
No 242
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.03 E-value=2.7e-07 Score=97.52 Aligned_cols=281 Identities=11% Similarity=0.042 Sum_probs=173.6
Q ss_pred eccEEEEEec-CceEEEEec-ccceeeeeeecCCcc----------eEEEEEEeeCCCE----EEEEEEeecCCCcceee
Q 016446 12 ARDIVFALAH-SGVCAAFSR-ETNRRICFLNVSPDE----------VIRSLFYNKNNDS----LITVSVYASDNFSSLKC 75 (389)
Q Consensus 12 ~~~~~a~~~~-~gtiklW~~-~tg~~l~tl~~~~~~----------~v~sv~~spdg~~----l~s~s~~~~~d~~~l~~ 75 (389)
.+++|.+.+. ++.+..+|. +||+.+=........ ..+.++++|.+.. |+. +..|
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v----~t~d------ 130 (599)
T 1w6s_A 61 VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILK----TQLD------ 130 (599)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEE----ECTT------
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEE----EcCC------
Confidence 4777888887 899999999 899988665543211 1245777765555 655 3455
Q ss_pred eeeeEeEeccCCCCCcceeEeeeccc-----Ccee-EEEecCCCeEEEEec-----CCCeEEEEeCCCCeEEEEecC-Cc
Q 016446 76 RSTKIEYIRRGKPDSGFALFESESLK-----WPGF-VEFDDVNGKVLTYSA-----QDSIYKVFDLKNYTMLYSISD-KH 143 (389)
Q Consensus 76 ~~~~l~~i~~g~~~~~~~l~~~~~~~-----~~~~-v~Fs~pdG~~Las~s-----~D~tiklWdl~~g~~l~tl~~-~~ 143 (389)
..+.-.|..+|++ +|...... .+.+ -... +|++++.++ .++.|+-+|+++|+++.++.. ..
T Consensus 131 g~l~AlDa~TG~~-----~W~~~~~~~~~~~~~~ssP~v~--~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~ 203 (599)
T 1w6s_A 131 GNVAALNAETGET-----VWKVENSDIKVGSTLTIAPYVV--KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGP 203 (599)
T ss_dssp SEEEEEETTTCCE-----EEEEECCCGGGTCBCCSCCEEE--TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSC
T ss_pred CEEEEEECCCCCE-----EEeecCCCCCccceeecCCEEE--CCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCC
Confidence 4455566678887 56533211 1111 1222 677766543 489999999999999877652 11
Q ss_pred --------------------------------------EE-EEEEc-CCceEEEEecCCC-------------CeeEEEE
Q 016446 144 --------------------------------------VQ-EIKIS-PGIMLLIFNRSSS-------------HVPLKIL 170 (389)
Q Consensus 144 --------------------------------------V~-~vafS-~g~~la~~~~~s~-------------d~tiklW 170 (389)
+| ..++. ...++..+..... ...|.-+
T Consensus 204 ~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Al 283 (599)
T 1w6s_A 204 DKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGR 283 (599)
T ss_dssp HHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEE
T ss_pred ccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEE
Confidence 12 24454 3455555432210 1479999
Q ss_pred EcCCCeEEEEEeecCCcee-------EEEEEe--cCCC---eEEEEeCCCcEEEEECCCCeEEEEcccCC----------
Q 016446 171 SIEDGTVLKVFYHLLHRNK-------KVDFIE--QFNE---KLLVKQENENLQILDVRNAELMEVSRTEF---------- 228 (389)
Q Consensus 171 d~~tG~~l~tl~~~~~~~~-------~v~f~~--~~~~---~l~~~s~D~tIklWd~~tg~~~~~l~gh~---------- 228 (389)
|..||+.+-.++...+..+ .+.+.. .+++ .++.++.++.+.+.|.++|+++-..+-..
T Consensus 284 d~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~ 363 (599)
T 1w6s_A 284 DADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDL 363 (599)
T ss_dssp ETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECT
T ss_pred eCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccccccc
Confidence 9999999998874322111 122221 2342 34457899999999999999876543110
Q ss_pred ---Cce--------------------------EEEEEcCCCcEEEEE---------------------------------
Q 016446 229 ---MTP--------------------------SAFIFLYENQLFLTF--------------------------------- 246 (389)
Q Consensus 229 ---~~v--------------------------~sv~fspdg~~laS~--------------------------------- 246 (389)
..+ ..++|+|+.+++...
T Consensus 364 ~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~ 443 (599)
T 1w6s_A 364 KTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPK 443 (599)
T ss_dssp TTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTT
T ss_pred CCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCc
Confidence 011 245778877766442
Q ss_pred -------cCCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeE
Q 016446 247 -------RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 318 (389)
Q Consensus 247 -------sD~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~ 318 (389)
.++.+.-||+. |+.+-..+- ..+ +++-.++..|.++..++. |+.++.+|.+||++
T Consensus 444 ~~~~~~~~~G~l~A~D~~tG~~~W~~~~-~~~-----~~~g~~~tagg~vf~gt~-----------dg~l~A~D~~tG~~ 506 (599)
T 1w6s_A 444 GDRQNYEGLGQIKAYNAITGDYKWEKME-RFA-----VWGGTMATAGDLVFYGTL-----------DGYLKARDSDTGDL 506 (599)
T ss_dssp SBTTTTBCCEEEEEECTTTCCEEEEEEE-SSC-----CCSBCEEETTTEEEEECT-----------TSEEEEEETTTCCE
T ss_pred CCcccCCCcCeEEEEECCCCCEEeEecC-CCC-----ccCcceEecCCEEEEECC-----------CCeEEEEECCCCCE
Confidence 13688899996 988766542 111 122222335666776765 59999999999999
Q ss_pred EEEecCCC
Q 016446 319 LAKINATN 326 (389)
Q Consensus 319 l~tl~gH~ 326 (389)
+.+++-..
T Consensus 507 lW~~~l~~ 514 (599)
T 1w6s_A 507 LWKFKIPS 514 (599)
T ss_dssp EEEEECSS
T ss_pred EEEeeCCC
Confidence 99886543
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.02 E-value=6.4e-07 Score=82.89 Aligned_cols=201 Identities=11% Similarity=0.017 Sum_probs=134.2
Q ss_pred cCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec-C-CcEEEEEEcC-CceEEEEecCCCCeeEEEEEcCCCeE
Q 016446 101 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-D-KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTV 177 (389)
Q Consensus 101 ~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~-~-~~V~~vafS~-g~~la~~~~~s~d~tiklWd~~tG~~ 177 (389)
.++..++|++.++.+.++....+.|..+++.++.....+. + .....++|.+ ++.|..+... .+.|...++.. +.
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~--~~~I~~~~~~g-~~ 112 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQ--LDRIEVAKMDG-TQ 112 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETT--TTEEEEEETTS-CS
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECC--CCEEEEEEcCC-CC
Confidence 4567899983356777777788999999986555433333 2 5789999995 7777776433 46899999754 43
Q ss_pred EEEEe-ecCCceeEEEEEecCCCeEEEEeC---CCcEEEEECCCCeEEEEc-ccCCCceEEEEEcCCCc-EEEEEc-CCe
Q 016446 178 LKVFY-HLLHRNKKVDFIEQFNEKLLVKQE---NENLQILDVRNAELMEVS-RTEFMTPSAFIFLYENQ-LFLTFR-NRT 250 (389)
Q Consensus 178 l~tl~-~~~~~~~~v~f~~~~~~~l~~~s~---D~tIklWd~~tg~~~~~l-~gh~~~v~sv~fspdg~-~laS~s-D~t 250 (389)
...+. .....-..+++. |+++.|..+.. .+.|...++. |+..+.+ ......+..++++|+++ +.++-. .+.
T Consensus 113 ~~~~~~~~~~~P~~i~vd-~~~g~lyv~~~~~~~~~I~~~~~d-g~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~ 190 (267)
T 1npe_A 113 RRVLFDTGLVNPRGIVTD-PVRGNLYWTDWNRDNPKIETSHMD-GTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR 190 (267)
T ss_dssp CEEEECSSCSSEEEEEEE-TTTTEEEEEECCSSSCEEEEEETT-SCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEEECCCCCccEEEEe-eCCCEEEEEECCCCCcEEEEEecC-CCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCE
Confidence 33332 212345788887 55677666543 4789888885 4433333 23445789999999765 556666 889
Q ss_pred EEEEeCCCcEEE-EeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecC
Q 016446 251 VAVWNFRGELVT-SFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 324 (389)
Q Consensus 251 IklWd~~G~~l~-tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~g 324 (389)
|...|.+|..+. .+.+-.. -..+++ |+..|..+... .+.|...|..+|+.+.++..
T Consensus 191 I~~~~~~g~~~~~~~~~~~~------P~gi~~--d~~~lyva~~~----------~~~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 191 AECLNPAQPGRRKVLEGLQY------PFAVTS--YGKNLYYTDWK----------TNSVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp EEEEETTEEEEEEEEECCCS------EEEEEE--ETTEEEEEETT----------TTEEEEEETTTTEEEEEECC
T ss_pred EEEEecCCCceEEEecCCCC------ceEEEE--eCCEEEEEECC----------CCeEEEEeCCCCCceEEEcc
Confidence 999999854333 3332222 246665 45555555443 37999999999999999864
No 244
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.99 E-value=8.6e-06 Score=87.41 Aligned_cols=312 Identities=8% Similarity=0.030 Sum_probs=191.3
Q ss_pred EEEEEee-ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEec
Q 016446 6 VIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIR 84 (389)
Q Consensus 6 v~~i~~~-~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~ 84 (389)
|..|... +..|-++..++-+..|+.++++............|++|+..++|...|.+ .+ ..+.+++..
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt-----~~------~Gl~~~~~~ 243 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVAT-----EG------AGLFLINPK 243 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEE-----BS------SCEEEEETT
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEE-----CC------CCeEEEeCC
Confidence 7777775 55566677665577888876765443222223679999999999876652 22 223444444
Q ss_pred cCCCCCcceeEeee-------cccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEe---------cCCcEEEEE
Q 016446 85 RGKPDSGFALFESE-------SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI---------SDKHVQEIK 148 (389)
Q Consensus 85 ~g~~~~~~~l~~~~-------~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl---------~~~~V~~va 148 (389)
++++ ..+... ....+.++..+ ++|.+.+.. .+ -|.++|..+++..... ....|+++.
T Consensus 244 ~~~~----~~~~~~~~~~~~l~~~~i~~i~~d-~~g~lWigt-~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~ 316 (795)
T 4a2l_A 244 TKEI----KNYLHSPSNPKSISSNYIRSLAMD-SQNRLWIGT-FN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIF 316 (795)
T ss_dssp TTEE----EEECCCTTCTTSCSCSBEEEEEEC-TTSCEEEEE-SS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEE
T ss_pred CCeE----EEeecCCCCccccCCCeEEEEEEc-CCCCEEEEe-CC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEE
Confidence 3332 011111 11335678887 789877643 44 5889998887754322 235799999
Q ss_pred EcCCceEEEEecCCCCeeEEEEEcCCCeEEEEEee-------cCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEE
Q 016446 149 ISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH-------LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELM 221 (389)
Q Consensus 149 fS~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~-------~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~ 221 (389)
..+.+.|-++... +-|..++..+++.. .+.. ....|.++... ..+.|-+|..++-|..||.++++..
T Consensus 317 ~D~~g~lWigt~~---~Gl~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~d--~~g~lWiGt~~~Gl~~~~~~~~~~~ 390 (795)
T 4a2l_A 317 MDSQGGMWLGTYF---GGLNYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVED--KDKNLWIGTNDGGLNLYNPITQRFT 390 (795)
T ss_dssp ECTTSCEEEEESS---SCEEEECGGGGSSE-EECCCTTSSSCSCSSEEEEEEC--TTSCEEEEESSSCEEEECTTTCCEE
T ss_pred EeCCcCEEEEECC---CCeEEeCCCcccce-EEcCCCCCCCCCCCeeEEEEEC--CCCCEEEEECCCCeEEEcCCCCcEE
Confidence 9843444455332 45888887665432 2321 11235555542 2567888888888999999988876
Q ss_pred EEccc--------CCCceEEEEEcCCCc-EEEEEcCCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEE
Q 016446 222 EVSRT--------EFMTPSAFIFLYENQ-LFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISY 291 (389)
Q Consensus 222 ~~l~g--------h~~~v~sv~fspdg~-~laS~sD~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~ 291 (389)
..... ....|.+++..++|+ +.+...++-|.++|.+ |+.. .+.......+...|.+++..++|++.+..
T Consensus 391 ~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt 469 (795)
T 4a2l_A 391 SYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLGT 469 (795)
T ss_dssp EECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEEE
T ss_pred EEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEEe
Confidence 65322 235799999999999 6665556778899987 5543 33311100111248999999999988864
Q ss_pred ecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCC
Q 016446 292 CKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEE 371 (389)
Q Consensus 292 s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpd 371 (389)
. +-|.++|..+++....... .. + .+ -....|.++..+++
T Consensus 470 ~-------------~Gl~~~~~~~~~~~~~~~~-~~-~-------~~-------------------~~~~~i~~i~~d~~ 508 (795)
T 4a2l_A 470 L-------------SALVRFNPEQRSFTTIEKE-KD-G-------TP-------------------VVSKQITTLFRDSH 508 (795)
T ss_dssp S-------------SCEEEEETTTTEEEECCBC-TT-C-------CB-------------------CCCCCEEEEEECTT
T ss_pred c-------------CceeEEeCCCCeEEEcccc-cc-c-------cc-------------------cCCceEEEEEECCC
Confidence 2 3588899888776432211 00 0 00 00147999999999
Q ss_pred CCEEEEecCCCcE
Q 016446 372 RNEIYTGNRHGLV 384 (389)
Q Consensus 372 g~~LaSgs~D~tI 384 (389)
|++.+... .|..
T Consensus 509 g~lWigt~-~Gl~ 520 (795)
T 4a2l_A 509 KRLWIGGE-EGLS 520 (795)
T ss_dssp CCEEEEES-SCEE
T ss_pred CCEEEEeC-CceE
Confidence 99888766 5543
No 245
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.99 E-value=9.2e-07 Score=81.79 Aligned_cols=191 Identities=9% Similarity=0.076 Sum_probs=122.4
Q ss_pred eEEEEecCCCeEEEEeCCCCeE-------EEEecCCcEEEEEEcC-CceEEEEecCCCCeeEEEEEcCCCeEEEEEeecC
Q 016446 114 KVLTYSAQDSIYKVFDLKNYTM-------LYSISDKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLL 185 (389)
Q Consensus 114 ~~Las~s~D~tiklWdl~~g~~-------l~tl~~~~V~~vafS~-g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~ 185 (389)
++|..+.. +.|+.+++..... +..........+++++ ++.|..+.. ..+.|..+++.+++....+....
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~~~~ 78 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDI--SEPSIGRASLHGGEPTTIIRQDL 78 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEET--TTTEEEEEESSSCCCEEEECTTC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEEC--CCCEEEEEecCCCCcEEEEECCC
Confidence 44444432 4788888754432 2222235678999994 777777643 34789999987665444443222
Q ss_pred CceeEEEEEecCCCeEEEE-eCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCC-CcEEEEEc---CCeEEEEeCCCcE
Q 016446 186 HRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLYE-NQLFLTFR---NRTVAVWNFRGEL 260 (389)
Q Consensus 186 ~~~~~v~f~~~~~~~l~~~-s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspd-g~~laS~s---D~tIklWd~~G~~ 260 (389)
.....+++. ++++.+..+ ...+.|.++|+...............+..+++.|+ |++.++.. .+.|...+++|+.
T Consensus 79 ~~p~~ia~d-~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~ 157 (267)
T 1npe_A 79 GSPEGIALD-HLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN 157 (267)
T ss_dssp CCEEEEEEE-TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC
T ss_pred CCccEEEEE-ecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC
Confidence 456788887 556666665 47789999999654433333333357899999995 66666654 3688888998776
Q ss_pred EEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEe
Q 016446 261 VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 322 (389)
Q Consensus 261 l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl 322 (389)
.+.+...... .-+.++|+||+++|..+... .+.|...|+..++....+
T Consensus 158 ~~~~~~~~~~----~P~gia~d~~~~~lyv~d~~----------~~~I~~~~~~g~~~~~~~ 205 (267)
T 1npe_A 158 RRILAQDNLG----LPNGLTFDAFSSQLCWVDAG----------THRAECLNPAQPGRRKVL 205 (267)
T ss_dssp CEEEECTTCS----CEEEEEEETTTTEEEEEETT----------TTEEEEEETTEEEEEEEE
T ss_pred cEEEEECCCC----CCcEEEEcCCCCEEEEEECC----------CCEEEEEecCCCceEEEe
Confidence 5555311111 14799999998877655433 479999998754433333
No 246
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.98 E-value=1.5e-07 Score=96.25 Aligned_cols=201 Identities=11% Similarity=0.057 Sum_probs=131.2
Q ss_pred CCCeE-EEEecCCCeEEEEeCCCC----eEEEEec--------CC-cEEEEEEcCCceEEEEecCCC----CeeEEEEEc
Q 016446 111 VNGKV-LTYSAQDSIYKVFDLKNY----TMLYSIS--------DK-HVQEIKISPGIMLLIFNRSSS----HVPLKILSI 172 (389)
Q Consensus 111 pdG~~-Las~s~D~tiklWdl~~g----~~l~tl~--------~~-~V~~vafS~g~~la~~~~~s~----d~tiklWd~ 172 (389)
+++++ ++++-.+++|.+.|+++- +...++. +. .=..+..+|+++. ++..++. .+.|-+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~-Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIY-ISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEE-EEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEE-EEcCCCcCCCCCCeEEEEEC
Confidence 45665 556778999999998754 5667773 21 3456788865544 4433332 268999999
Q ss_pred CCCeEEEEEeecCCc---eeEEEEEecCCCeEEEEe-------------------CCCcEEEEECCCCeEEEEcccC--C
Q 016446 173 EDGTVLKVFYHLLHR---NKKVDFIEQFNEKLLVKQ-------------------ENENLQILDVRNAELMEVSRTE--F 228 (389)
Q Consensus 173 ~tG~~l~tl~~~~~~---~~~v~f~~~~~~~l~~~s-------------------~D~tIklWd~~tg~~~~~l~gh--~ 228 (389)
+|++++.+.+--.+. -..+-|+ |+...++++. .+.+|.+||+.+++.++++.-. .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~-p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWN-LPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEE-TTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCeEEEEEccCCCCccccceEEEC-CCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 999999999722122 2446667 6667677663 4899999999999988887542 2
Q ss_pred CceEEEEE--cCCCcEEEEE-------cCCeEEEEeCC-CcE--EEEe--ccC--cCCcC---------CCCeeEEEECC
Q 016446 229 MTPSAFIF--LYENQLFLTF-------RNRTVAVWNFR-GEL--VTSF--EDH--LLWHP---------DCNTNNIYITS 283 (389)
Q Consensus 229 ~~v~sv~f--spdg~~laS~-------sD~tIklWd~~-G~~--l~tl--~gh--~~~~~---------~~~v~sv~fSp 283 (389)
.....++| +|+|+++-.+ -+++|-+|..+ |+. ++.+ ... ....+ ......|.+||
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 34556656 9999875543 24588777664 532 2221 110 00000 01147899999
Q ss_pred CCCEEEEEecCCCcccccCCCCCeEEEEeCC---CCeEEEEec
Q 016446 284 DQDLIISYCKAEPEDQWMEGSAGSINVSSIL---TGKCLAKIN 323 (389)
Q Consensus 284 dG~~laS~s~D~~~~~~~~s~D~tIklWd~~---tg~~l~tl~ 323 (389)
||++|-.+... .++|.++|+. +.+++..+.
T Consensus 331 DGrfLYVSnrg----------~d~VavfdV~d~~~~~lv~~I~ 363 (462)
T 2ece_A 331 DDKFLYLSLWG----------IGEVRQYDISNPFKPVLTGKVK 363 (462)
T ss_dssp TSCEEEEEETT----------TTEEEEEECSSTTSCEEEEEEE
T ss_pred CCCEEEEEeCC----------CCEEEEEEecCCCCcEEEEEEE
Confidence 99999998875 3899999985 245665553
No 247
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.98 E-value=9.1e-07 Score=92.88 Aligned_cols=281 Identities=14% Similarity=0.074 Sum_probs=166.7
Q ss_pred eccEEEEEecCceEEEEecccceeeeeeecCCcce--------EEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEe
Q 016446 12 ARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEV--------IRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYI 83 (389)
Q Consensus 12 ~~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~--------v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i 83 (389)
.+++|.+.+.++.+..+|.+||+.+=......... -+.+++ .+..|+.+ ..| ..+.-.|.
T Consensus 67 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~----t~d------g~l~AlD~ 134 (582)
T 1flg_A 67 SDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFG----TLD------ASVVALNK 134 (582)
T ss_dssp ETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEE----ETT------TEEEEEES
T ss_pred ECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEE----eCC------CEEEEEEC
Confidence 46667777764448899999999887665532110 133333 34555552 344 34555666
Q ss_pred ccCCCCCcceeEeeecccC-----ce-e-EEEe-cCCCe-EEEEec------CCCeEEEEeCCCCeEEEEecCC--c---
Q 016446 84 RRGKPDSGFALFESESLKW-----PG-F-VEFD-DVNGK-VLTYSA------QDSIYKVFDLKNYTMLYSISDK--H--- 143 (389)
Q Consensus 84 ~~g~~~~~~~l~~~~~~~~-----~~-~-v~Fs-~pdG~-~Las~s------~D~tiklWdl~~g~~l~tl~~~--~--- 143 (389)
.+|+. +|....... +. + +.+. ..+|+ .|..++ .++.|.-.|+++|+++.+.+.. .
T Consensus 135 ~TG~~-----~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p 209 (582)
T 1flg_A 135 NTGKV-----VWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGR 209 (582)
T ss_dssp SSCCE-----EEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEE
T ss_pred CCCCE-----EeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCcccccc
Confidence 78886 565332110 11 1 2222 01343 344443 3899999999999998766421 0
Q ss_pred -------------------------------------E-EEEEEcC-CceEEEEecC-----------CC------C---
Q 016446 144 -------------------------------------V-QEIKISP-GIMLLIFNRS-----------SS------H--- 164 (389)
Q Consensus 144 -------------------------------------V-~~vafS~-g~~la~~~~~-----------s~------d--- 164 (389)
+ ...++.| ..++..+... .. |
T Consensus 210 ~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~ 289 (582)
T 1flg_A 210 LNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLY 289 (582)
T ss_dssp ETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTT
T ss_pred ccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcc
Confidence 1 1245553 4555554421 11 2
Q ss_pred -eeEEEEEcCCCeEEEEEeecCCc------e-eEEEEEe--cCCC---eEEEEeCCCcEEEEECCCCeEEEEcccCC--C
Q 016446 165 -VPLKILSIEDGTVLKVFYHLLHR------N-KKVDFIE--QFNE---KLLVKQENENLQILDVRNAELMEVSRTEF--M 229 (389)
Q Consensus 165 -~tiklWd~~tG~~l~tl~~~~~~------~-~~v~f~~--~~~~---~l~~~s~D~tIklWd~~tg~~~~~l~gh~--~ 229 (389)
+.|.-+|+.||+.+-.++...+. . ..+.+.. .+++ .++.++.++.+.++|.++|+.+-..+... .
T Consensus 290 ~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 290 TSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp CSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred cceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 58999999999999988631111 1 1222221 2443 45568899999999999999876543321 0
Q ss_pred ce-------------------------------------------EEEEEcCCCcEEEEE--------------------
Q 016446 230 TP-------------------------------------------SAFIFLYENQLFLTF-------------------- 246 (389)
Q Consensus 230 ~v-------------------------------------------~sv~fspdg~~laS~-------------------- 246 (389)
+. ..++|+|+..++...
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 00 134667765544332
Q ss_pred -------------c-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEE
Q 016446 247 -------------R-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVS 311 (389)
Q Consensus 247 -------------s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklW 311 (389)
. +++|.-||+. |+.+-....+.. +++-.+...|.+++.|+. |+.++.+
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~------~~~g~~~tagglvf~g~~-----------dg~l~A~ 512 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLP------LWAGVLATAGNLVFTGTG-----------DGYFKAF 512 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSC------CCSCCEEETTTEEEEECT-----------TSEEEEE
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCC------CcccceEeCCCEEEEECC-----------CCcEEEE
Confidence 2 5889999996 998866654322 122222235667777765 4999999
Q ss_pred eCCCCeEEEEecCCC
Q 016446 312 SILTGKCLAKINATN 326 (389)
Q Consensus 312 d~~tg~~l~tl~gH~ 326 (389)
|.+||+.+..++...
T Consensus 513 D~~tG~~lW~~~~~~ 527 (582)
T 1flg_A 513 DAKSGKELWKFQTGS 527 (582)
T ss_dssp ETTTCCEEEEEECSS
T ss_pred ECCCCCEEEEecCCC
Confidence 999999999987644
No 248
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.97 E-value=6.1e-06 Score=88.55 Aligned_cols=311 Identities=10% Similarity=0.038 Sum_probs=188.1
Q ss_pred EEEEEee-ccEEEEEecCceEEEEecccceeeeeeecCCcce-EEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEe
Q 016446 6 VIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEV-IRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYI 83 (389)
Q Consensus 6 v~~i~~~-~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~-v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i 83 (389)
|.+|... +..|-.+..+| +..|+.++++......+..... |.+++..++|+..|.. .+ ..+..++.
T Consensus 133 i~~i~~d~~g~lwi~t~~g-l~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt-----~~------~Gl~~~~~ 200 (795)
T 4a2l_A 133 VNGIEEISPEQLLISTPEG-LIMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQIYIGT-----ST------DGLYTYSI 200 (795)
T ss_dssp CCEEEEEETTEEEEEETTE-EEEEETTTTEEECSSSCHHHHTCCEEEEEEETTEEEEEE-----SS------SCEEEEET
T ss_pred EEEEEECCCCCEEEEECCc-eEEEECCCCEEEeccCCCCCCcceEEEEECCCCCEEEEE-----CC------CCEEEEeC
Confidence 6777766 44455555544 6788987666543221111123 8999999999866641 22 23444554
Q ss_pred ccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEe---------cCCcEEEEEEc-CCc
Q 016446 84 RRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI---------SDKHVQEIKIS-PGI 153 (389)
Q Consensus 84 ~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl---------~~~~V~~vafS-~g~ 153 (389)
..+++. ..........+.++..+ ++|.+.+... ++-+.++|..+++...-. ....|.++... +|.
T Consensus 201 ~~~~~~---~~~~~~~~~~i~~i~~d-~~g~lwigt~-~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~ 275 (795)
T 4a2l_A 201 TQKTFE---KVIPILGTKQIQAILQQ-SPTRIWVATE-GAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNR 275 (795)
T ss_dssp TTCCEE---ECC----CCCEEEEEEE-ETTEEEEEEB-SSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSC
T ss_pred CCCeEE---EecCCCCCCeeEEEEEc-CCCCEEEEEC-CCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCC
Confidence 555431 11000112345667776 7898877543 334888998887754322 23579999998 455
Q ss_pred eEEEEecCCCCeeEEEEEcCCCeEEEEEee-------cCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEccc
Q 016446 154 MLLIFNRSSSHVPLKILSIEDGTVLKVFYH-------LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT 226 (389)
Q Consensus 154 ~la~~~~~s~d~tiklWd~~tG~~l~tl~~-------~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~g 226 (389)
+. ++... -|.++|..+++....... ....+.++... ..+.|-+|..++-|..+|..++........
T Consensus 276 lW-igt~~----Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D--~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~ 348 (795)
T 4a2l_A 276 LW-IGTFN----DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMD--SQGGMWLGTYFGGLNYYHPIRNRFKNIRNI 348 (795)
T ss_dssp EE-EEESS----CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEEC--TTSCEEEEESSSCEEEECGGGGSSEEECCC
T ss_pred EE-EEeCC----hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEe--CCcCEEEEECCCCeEEeCCCcccceEEcCC
Confidence 44 44322 488999888775543211 11345666543 256788888888899999877765433211
Q ss_pred ------CCCceEEEEEcCCCcEEEEEcCCeEEEEeCC-CcEEEEeccCcC---CcCCCCeeEEEECCCCC-EEEEEecCC
Q 016446 227 ------EFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLL---WHPDCNTNNIYITSDQD-LIISYCKAE 295 (389)
Q Consensus 227 ------h~~~v~sv~fspdg~~laS~sD~tIklWd~~-G~~l~tl~gh~~---~~~~~~v~sv~fSpdG~-~laS~s~D~ 295 (389)
....|.+++..++|++.+...++-|..||.. ++...-...... ......|.+++..++|+ +.+ |+.+
T Consensus 349 ~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~~- 426 (795)
T 4a2l_A 349 PYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTHA- 426 (795)
T ss_dssp TTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EETT-
T ss_pred CCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeCc-
Confidence 2456999999999998886657678889987 554332211100 00112389999999999 555 4432
Q ss_pred CcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEE
Q 016446 296 PEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEI 375 (389)
Q Consensus 296 ~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~L 375 (389)
+-|.++|..+|+...-...... + ....|+++..+++|++.
T Consensus 427 ----------~Gl~~~d~~~~~~~~~~~~~~~----------------------------l--~~~~v~~i~~d~~g~lw 466 (795)
T 4a2l_A 427 ----------GGLSILHRNSGQVENFNQRNSQ----------------------------L--VNENVYAILPDGEGNLW 466 (795)
T ss_dssp ----------TEEEEEETTTCCEEEECTTTSC----------------------------C--SCSCEEEEEECSSSCEE
T ss_pred ----------CceeEEeCCCCcEEEeecCCCC----------------------------c--CCCeeEEEEECCCCCEE
Confidence 6799999888876433211100 0 01479999999999977
Q ss_pred EEecCCCc
Q 016446 376 YTGNRHGL 383 (389)
Q Consensus 376 aSgs~D~t 383 (389)
+... +|.
T Consensus 467 igt~-~Gl 473 (795)
T 4a2l_A 467 LGTL-SAL 473 (795)
T ss_dssp EEES-SCE
T ss_pred EEec-Cce
Confidence 7665 553
No 249
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.97 E-value=4.4e-07 Score=86.47 Aligned_cols=243 Identities=14% Similarity=0.045 Sum_probs=150.4
Q ss_pred ccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEE-EEec--------------------CCcEEEEEEcC-CceEEE
Q 016446 100 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML-YSIS--------------------DKHVQEIKISP-GIMLLI 157 (389)
Q Consensus 100 ~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l-~tl~--------------------~~~V~~vafS~-g~~la~ 157 (389)
+..|..++++ |+|++|.++..++.|..||..+++.. +... ......+++.+ ++.|.+
T Consensus 18 ~~~p~~i~~d-~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 18 SYAPNSFTFD-STNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp SSCCCCEECC-TTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred cCCceEEEEc-CCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 3467789998 89986777888999999998766542 2211 13588999995 666666
Q ss_pred EecCCCCeeEEEEEcCCCeEEEEEee-----cCCceeEEEEEec-CCCeEEEEeC-----------------CCcEEEEE
Q 016446 158 FNRSSSHVPLKILSIEDGTVLKVFYH-----LLHRNKKVDFIEQ-FNEKLLVKQE-----------------NENLQILD 214 (389)
Q Consensus 158 ~~~~s~d~tiklWd~~tG~~l~tl~~-----~~~~~~~v~f~~~-~~~~l~~~s~-----------------D~tIklWd 214 (389)
+... +.|..+|..+|+ +.++.. .......+++. + ++...++-.. ++.|..+|
T Consensus 97 ~d~~---~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d-~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 171 (322)
T 2fp8_A 97 VDCY---YHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVD-QRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD 171 (322)
T ss_dssp EETT---TEEEEECTTCEE-CEEEESEETTEECSCEEEEEEC-TTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE
T ss_pred EECC---CCEEEEeCCCCE-EEEecccCCCCcccccceEEEe-cCCCEEEEECCcccccccccceehcccCCCceEEEEe
Confidence 6433 348888977664 333321 11234667775 5 5544444322 36788899
Q ss_pred CCCCeEEEEcccCCCceEEEEEcCCCcE-EEEEc-CCeEEEEeCCCc---EEEEeccCcCCcCCCCeeEEEECCCCCEEE
Q 016446 215 VRNAELMEVSRTEFMTPSAFIFLYENQL-FLTFR-NRTVAVWNFRGE---LVTSFEDHLLWHPDCNTNNIYITSDQDLII 289 (389)
Q Consensus 215 ~~tg~~~~~l~gh~~~v~sv~fspdg~~-laS~s-D~tIklWd~~G~---~l~tl~gh~~~~~~~~v~sv~fSpdG~~la 289 (389)
..+++...... .......++|+|||+. .++-. .+.|..++++++ ....+.....+ ..+++.++|++.+
T Consensus 172 ~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~gP------~gi~~d~~G~l~v 244 (322)
T 2fp8_A 172 PSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPNP------GNIKRNADGHFWV 244 (322)
T ss_dssp TTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSSE------EEEEECTTSCEEE
T ss_pred CCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCCC------CCeEECCCCCEEE
Confidence 98887644332 2345678999999984 45556 889999998742 12222211112 6899999999888
Q ss_pred EEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEEC
Q 016446 290 SYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYD 369 (389)
Q Consensus 290 S~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafS 369 (389)
+........ -..+..+.|..+|. .|+.+..+....+. ....+.++++
T Consensus 245 a~~~~~~~~-~~~~~~~~v~~~d~-~G~~~~~~~~~~g~------------------------------~~~~~~~~~~- 291 (322)
T 2fp8_A 245 SSSEELDGN-MHGRVDPKGIKFDE-FGNILEVIPLPPPF------------------------------AGEHFEQIQE- 291 (322)
T ss_dssp EEEEETTSS-TTSCEEEEEEEECT-TSCEEEEEECCTTT------------------------------TTSCCCEEEE-
T ss_pred EecCccccc-ccCCCccEEEEECC-CCCEEEEEECCCCC------------------------------ccccceEEEE-
Confidence 764300000 00001256888884 69888887644310 0135677777
Q ss_pred CCCCEEEEecCCCcEEEcc
Q 016446 370 EERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 370 pdg~~LaSgs~D~tIrlW~ 388 (389)
++|+.+++....+.|..++
T Consensus 292 ~~g~L~v~~~~~~~i~~~~ 310 (322)
T 2fp8_A 292 HDGLLYIGTLFHGSVGILV 310 (322)
T ss_dssp ETTEEEEECSSCSEEEEEE
T ss_pred eCCEEEEeecCCCceEEEe
Confidence 5777777777777776654
No 250
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.94 E-value=1.8e-07 Score=89.23 Aligned_cols=180 Identities=11% Similarity=0.079 Sum_probs=132.2
Q ss_pred eeEEEecCCCeEEEEecCCC--eEEEEeCCCCeEEEEec-CCcE--EEEEEcCCceEEEEecCCCCeeEEEEEcCCCeEE
Q 016446 104 GFVEFDDVNGKVLTYSAQDS--IYKVFDLKNYTMLYSIS-DKHV--QEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVL 178 (389)
Q Consensus 104 ~~v~Fs~pdG~~Las~s~D~--tiklWdl~~g~~l~tl~-~~~V--~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~l 178 (389)
..++|+ ||.+..|.+.++ .|+..|+++|+.+.++. .... ..+++. |++|..... .++.+.++|.+|++.+
T Consensus 46 qGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~-g~~ly~ltw--~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 46 EGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW-KDKIVGLTW--KNGLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEES--SSSEEEEEETTTCCEE
T ss_pred ceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe-CCEEEEEEe--eCCEEEEEECccCcEE
Confidence 458997 689999998876 99999999999888775 3333 445554 455555533 3479999999999999
Q ss_pred EEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEccc----CC-CceEEEEEcCCCcEEEEEc-CCeEE
Q 016446 179 KVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT----EF-MTPSAFIFLYENQLFLTFR-NRTVA 252 (389)
Q Consensus 179 ~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~g----h~-~~v~sv~fspdg~~laS~s-D~tIk 252 (389)
.+++.. ..=+.++ ++++.|..+..+.+|.++|.++.+.+.++.- +. ..++.+.+. +|++.|... +++|-
T Consensus 121 ~ti~~~-~eG~glt---~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~ 195 (262)
T 3nol_A 121 RSFNYD-GEGWGLT---HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIV 195 (262)
T ss_dssp EEEECS-SCCCCEE---ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred EEEECC-CCceEEe---cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEE
Confidence 999842 2224444 4677787776688999999999988776532 22 345567776 899998887 88999
Q ss_pred EEeCC-CcEEEEeccCcCC-------cCCCCeeEEEECCCCCEEEEEec
Q 016446 253 VWNFR-GELVTSFEDHLLW-------HPDCNTNNIYITSDQDLIISYCK 293 (389)
Q Consensus 253 lWd~~-G~~l~tl~gh~~~-------~~~~~v~sv~fSpdG~~laS~s~ 293 (389)
+-|.. |+.+.++.-.... ..+...+.|||+|+++.|...+.
T Consensus 196 vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 196 RIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 99996 9998887642110 01123689999999988888654
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.91 E-value=2.8e-07 Score=87.85 Aligned_cols=208 Identities=11% Similarity=0.106 Sum_probs=136.9
Q ss_pred CeEEEEecC---CcEEEEEEcCCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEE-eCCC
Q 016446 133 YTMLYSISD---KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVK-QENE 208 (389)
Q Consensus 133 g~~l~tl~~---~~V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~-s~D~ 208 (389)
.+.+.+++. ...+.+.|+++ +|..+........|+..|++||+.++++.-. ...+..... +++++|... -.++
T Consensus 31 ~~vv~~~phd~~~ftqGL~~~~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit-~~g~~ly~ltw~~~ 107 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFYRNG-YFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGIS-DWKDKIVGLTWKNG 107 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEEETT-EEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEE-EETTEEEEEESSSS
T ss_pred eEEEEEecCCCCcccceEEEECC-EEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEE-EeCCEEEEEEeeCC
Confidence 345666753 45799999965 5545443333469999999999999998742 344333222 346666665 4799
Q ss_pred cEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCC
Q 016446 209 NLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD 286 (389)
Q Consensus 209 tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~ 286 (389)
++.++|.++++.+.++.-.. .-+. +.+||+.|..+. +++|.+.|.+ .+.+.+++--....+-..++.+.+. ||+
T Consensus 108 ~v~v~D~~t~~~~~ti~~~~-eG~g--lt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~ 183 (262)
T 3nol_A 108 LGFVWNIRNLRQVRSFNYDG-EGWG--LTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE 183 (262)
T ss_dssp EEEEEETTTCCEEEEEECSS-CCCC--EEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEEEEECccCcEEEEEECCC-CceE--EecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE
Confidence 99999999999999876432 2233 446677666665 8889999996 8888876632111010125667776 887
Q ss_pred EEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEE
Q 016446 287 LIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSL 366 (389)
Q Consensus 287 ~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~sv 366 (389)
..|..-. +++|.+-|.+||+.+.++.-....+.. .. .....+.-+.+
T Consensus 184 lyan~w~-----------~~~I~vIDp~tG~V~~~Id~~~L~~~~--~~--------------------~~~~~~vlNGI 230 (262)
T 3nol_A 184 IFANVWQ-----------TNKIVRIDPETGKVTGIIDLNGILAEA--GP--------------------LPSPIDVLNGI 230 (262)
T ss_dssp EEEEETT-----------SSEEEEECTTTCBEEEEEECTTGGGGS--CS--------------------CCSSCCCEEEE
T ss_pred EEEEEcc-----------CCeEEEEECCCCcEEEEEECCcCcccc--cc--------------------ccCcCCceEEE
Confidence 6665433 379999999999999999754310000 00 00011467889
Q ss_pred EECCCCCEEEEecC
Q 016446 367 FYDEERNEIYTGNR 380 (389)
Q Consensus 367 afSpdg~~LaSgs~ 380 (389)
||+|++++|.-.+.
T Consensus 231 A~dp~~~~lfVTGK 244 (262)
T 3nol_A 231 AWDKEHHRLFVTGK 244 (262)
T ss_dssp EEETTTTEEEEEET
T ss_pred EEcCCCCEEEEECC
Confidence 99999998887773
No 252
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.89 E-value=3.2e-07 Score=98.78 Aligned_cols=248 Identities=10% Similarity=0.049 Sum_probs=147.7
Q ss_pred eEEEEEEe-eCCCEEEEEEEeecCCCcceeeeeeeEeEeccC-CCCCcceeEeeecccCceeEEEecCCCeEEEEecCC-
Q 016446 46 VIRSLFYN-KNNDSLITVSVYASDNFSSLKCRSTKIEYIRRG-KPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD- 122 (389)
Q Consensus 46 ~v~sv~~s-pdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g-~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D- 122 (389)
.+.+..|| |||+.||.++...+.+ -.+++++++.+| +... ..+ . .. ..+++|+ |||+.|+..+.|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~-----~~~l~v~dl~~g~~~l~-~~~-~-~~---~~~~~Ws-pDg~~l~y~~~d~ 242 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNE-----VYTIEFKRISDPSQTIA-DKV-S-GT---NGEIVWG-PDHTSLFYVTKDE 242 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSS-----CEEEEEEETTCTTCCCC-CCE-E-EE---CSCCEEC-SSTTEEEEEEECT
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCc-----eEEEEEEECCCCCEeCC-ccc-c-Cc---eeeEEEe-cCCCEEEEEEECC
Confidence 67889999 9999999876654443 147888999888 6421 111 1 11 2368998 899999888766
Q ss_pred ----CeEEEEeCCCCe----EEEEec-CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCC--eE-EEEEe-ecCCce
Q 016446 123 ----SIYKVFDLKNYT----MLYSIS-DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDG--TV-LKVFY-HLLHRN 188 (389)
Q Consensus 123 ----~tiklWdl~~g~----~l~tl~-~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG--~~-l~tl~-~~~~~~ 188 (389)
..|.++++.+++ +++... .....++.+| ||++|+..+.......|.++|+.++ +. ++.+. ......
T Consensus 243 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~ 322 (751)
T 2xe4_A 243 TLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVR 322 (751)
T ss_dssp TCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCC
T ss_pred CCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCce
Confidence 368888987764 333333 2456789999 6888888776656678999999886 33 13343 333444
Q ss_pred eEEEEEecCCCeEEEEe-CC--C--cEEEEECCCCeEEEE-cccCCC--ceEEEEEcCCCcEEEEEc-CCeEEEE--eC-
Q 016446 189 KKVDFIEQFNEKLLVKQ-EN--E--NLQILDVRNAELMEV-SRTEFM--TPSAFIFLYENQLFLTFR-NRTVAVW--NF- 256 (389)
Q Consensus 189 ~~v~f~~~~~~~l~~~s-~D--~--tIklWd~~tg~~~~~-l~gh~~--~v~sv~fspdg~~laS~s-D~tIklW--d~- 256 (389)
+++.|. +++.|+..+ .+ + .|-.+|+.++...+. +..|.. .+..+.+. ++.++++.. |+..+|| ++
T Consensus 323 ~s~~~~--~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl~ 399 (751)
T 2xe4_A 323 YDVQMH--GTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMAD 399 (751)
T ss_dssp EEEEEE--TTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEECC
T ss_pred EEEeee--eCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEecc
Confidence 566553 377776654 43 3 555567765322222 223333 45556554 345556666 8865554 54
Q ss_pred ------C-CcEEEEeccCcCCcCCCCeeEEEE------CCCCC-EEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEe
Q 016446 257 ------R-GELVTSFEDHLLWHPDCNTNNIYI------TSDQD-LIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 322 (389)
Q Consensus 257 ------~-G~~l~tl~gh~~~~~~~~v~sv~f------SpdG~-~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl 322 (389)
. |+.++.+.-... ...+.| ++|++ ++++.+.. ..-.+|.+.|+.+|+. ..|
T Consensus 400 ~~~~~~~~g~~~~~l~l~~~------~~~~~~~~~~~~~~~~~~l~~~~ss~--------~~P~~~~~~d~~~~~~-~~l 464 (751)
T 2xe4_A 400 SQDGVFKAGTGLREVVMEEP------IFTVHLVESQMLEYEEPTFRMEYSSL--------ATPNTWFDVSPQDHSR-TAV 464 (751)
T ss_dssp TTTSCCCTTTCCEECCCCCS------SCEEEECGGGCCCTTCSCEEEEEEET--------TEEEEEEEECTTTCCE-EEE
T ss_pred cccccccCCccceEECCCCc------eeEEEeccCcccCCCCCEEEEEEeCC--------CCCCEEEEEECCCCcE-EEE
Confidence 4 441344421110 123455 56765 44554432 2235788889888763 344
Q ss_pred c
Q 016446 323 N 323 (389)
Q Consensus 323 ~ 323 (389)
.
T Consensus 465 ~ 465 (751)
T 2xe4_A 465 K 465 (751)
T ss_dssp E
T ss_pred e
Confidence 3
No 253
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.87 E-value=9.5e-07 Score=83.35 Aligned_cols=208 Identities=13% Similarity=0.129 Sum_probs=135.1
Q ss_pred CeEEEEecC---CcEEEEEEcCCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEE-eCCC
Q 016446 133 YTMLYSISD---KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVK-QENE 208 (389)
Q Consensus 133 g~~l~tl~~---~~V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~-s~D~ 208 (389)
.+.+.+++. ..+..+.|+++... .+........|+..|++||+.++++.-. ...+..... +.+++|... -.++
T Consensus 9 ~~v~~~~phd~~~ftqGL~~~~~~Ly-estG~~g~S~v~~vD~~tgkv~~~~~l~-~~~fgeGi~-~~~~~ly~ltw~~~ 85 (243)
T 3mbr_X 9 YRVVKRYPHDTTAFTEGLFYLRGHLY-ESTGETGRSSVRKVDLETGRILQRAEVP-PPYFGAGIV-AWRDRLIQLTWRNH 85 (243)
T ss_dssp EEEEEEEECCTTCCEEEEEEETTEEE-EEECCTTSCEEEEEETTTCCEEEEEECC-TTCCEEEEE-EETTEEEEEESSSS
T ss_pred eEEEEEcCCCCccccccEEEECCEEE-EECCCCCCceEEEEECCCCCEEEEEeCC-CCcceeEEE-EeCCEEEEEEeeCC
Confidence 455666652 56899999986544 4433333468999999999999998743 333333222 336666664 5899
Q ss_pred cEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCC
Q 016446 209 NLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD 286 (389)
Q Consensus 209 tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~ 286 (389)
++.++|.++.+.+.++.-.. .-+.++ +|++.|..+. +++|.++|.+ .+.+++++-.....+-..++.+.+. +|+
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ 161 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE 161 (243)
T ss_dssp EEEEEETTTTEEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEEEEECCcCcEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE
Confidence 99999999999999876432 334454 5666555554 8899999996 8888877632211110124566654 787
Q ss_pred EEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEE
Q 016446 287 LIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSL 366 (389)
Q Consensus 287 ~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~sv 366 (389)
..|..-. +..|.+-|.++|+.+..+.-....+... + . . ....+.-+.+
T Consensus 162 lyanvw~-----------s~~I~vIDp~tG~V~~~idl~~l~~~~~---~---------------~--~-~~~~~vlNGI 209 (243)
T 3mbr_X 162 LLANVWL-----------TSRIARIDPASGKVVAWIDLQALVPDAD---A---------------L--T-DSTNDVLNGI 209 (243)
T ss_dssp EEEEETT-----------TTEEEEECTTTCBEEEEEECGGGSTTTT---S---------------C--C-CTTSSCEEEE
T ss_pred EEEEECC-----------CCeEEEEECCCCCEEEEEECCcCccccc---c---------------c--c-CCcCCceEEE
Confidence 6655422 3699999999999999987543110000 0 0 0 0011467889
Q ss_pred EECCCCCEEEEec
Q 016446 367 FYDEERNEIYTGN 379 (389)
Q Consensus 367 afSpdg~~LaSgs 379 (389)
||+|++++|.-.+
T Consensus 210 A~d~~~~~lfVTG 222 (243)
T 3mbr_X 210 AFDAEHDRLFVTG 222 (243)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEcCCCCEEEEEC
Confidence 9999988887766
No 254
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.86 E-value=2.2e-06 Score=87.58 Aligned_cols=235 Identities=11% Similarity=0.049 Sum_probs=144.8
Q ss_pred ccEEEEEecCceEEEEecccc----eeeeeee------cCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeE
Q 016446 13 RDIVFALAHSGVCAAFSRETN----RRICFLN------VSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEY 82 (389)
Q Consensus 13 ~~~~a~~~~~gtiklW~~~tg----~~l~tl~------~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~ 82 (389)
+..++.+..+.+|.+.|..+. +..+++. ......=..+..+||| .+|++.. +.+ ...+ ..+-+-|
T Consensus 96 ~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g--~~~-g~~~-g~v~vlD 170 (462)
T 2ece_A 96 RFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALG--NEE-GEGP-GGILMLD 170 (462)
T ss_dssp CEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEE--ETT-SCSC-CEEEEEC
T ss_pred CEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCC--CcC-CCCC-CeEEEEE
Confidence 456777889999999998777 7777773 1111234677889999 6666553 322 1122 3555666
Q ss_pred eccCCCCCcceeEeee--cccCceeEEEecCCCeEEEEec-------------------CCCeEEEEeCCCCeEEEEecC
Q 016446 83 IRRGKPDSGFALFESE--SLKWPGFVEFDDVNGKVLTYSA-------------------QDSIYKVFDLKNYTMLYSISD 141 (389)
Q Consensus 83 i~~g~~~~~~~l~~~~--~~~~~~~v~Fs~pdG~~Las~s-------------------~D~tiklWdl~~g~~l~tl~~ 141 (389)
..++++.. -+... .......+-|+ |+++.+.+.. .+.+|.+||+.+++.+.++.-
T Consensus 171 ~~T~~v~~---~~~~~~~~~~~~Yd~~~~-p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 171 HYSFEPLG---KWEIDRGDQYLAYDFWWN-LPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp TTTCCEEE---ECCSBCTTCCCCCCEEEE-TTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred CCCCeEEE---EEccCCCCccccceEEEC-CCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 66666521 11101 11122347888 8999888874 378999999999998888863
Q ss_pred ----CcEEEEEE--cC-CceEEEEec---CCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEE
Q 016446 142 ----KHVQEIKI--SP-GIMLLIFNR---SSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQ 211 (389)
Q Consensus 142 ----~~V~~vaf--S~-g~~la~~~~---~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIk 211 (389)
..-+.|+| +| |.++.++.. ...+.+|-+|....|+.. . ++
T Consensus 247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~-~-----------------------------~~ 296 (462)
T 2ece_A 247 GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWN-A-----------------------------EK 296 (462)
T ss_dssp CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEE-E-----------------------------EE
T ss_pred CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCcee-E-----------------------------EE
Confidence 24567777 74 666666543 012357777665444311 1 11
Q ss_pred EEECCCCeEEEEc-------ccCCCceEEEEEcCCCcEEEEEc--CCeEEEEeCC--C--cEEEEeccC-----------
Q 016446 212 ILDVRNAELMEVS-------RTEFMTPSAFIFLYENQLFLTFR--NRTVAVWNFR--G--ELVTSFEDH----------- 267 (389)
Q Consensus 212 lWd~~tg~~~~~l-------~gh~~~v~sv~fspdg~~laS~s--D~tIklWd~~--G--~~l~tl~gh----------- 267 (389)
+.|+.+.+...++ .+-...+..|.+||||++|-.+. .++|.++|+. + +++..+.-.
T Consensus 297 vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G 376 (462)
T 2ece_A 297 VIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAG 376 (462)
T ss_dssp EEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTS
T ss_pred EEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecccccccc
Confidence 2222222111111 01123577899999999887774 8899999984 3 455544321
Q ss_pred c----CCcCCCCeeEEEECCCCCEEEEEe
Q 016446 268 L----LWHPDCNTNNIYITSDQDLIISYC 292 (389)
Q Consensus 268 ~----~~~~~~~v~sv~fSpdG~~laS~s 292 (389)
. .+ ..+++||||++|..+.
T Consensus 377 ~~~~ggP------r~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 377 HKLTGAP------QMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCCSCC------CCEEECTTSSEEEEEC
T ss_pred ccCCCCC------CEEEEcCCCCEEEEEc
Confidence 0 12 6899999999999986
No 255
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.85 E-value=1.4e-05 Score=85.60 Aligned_cols=311 Identities=12% Similarity=0.056 Sum_probs=186.8
Q ss_pred ccEEEEEee-ccEEEEEecCceEEEEecccceeeeeee-------------cCCcceEEEEEEeeCCCEEEEEEEeecCC
Q 016446 4 TKVIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLN-------------VSPDEVIRSLFYNKNNDSLITVSVYASDN 69 (389)
Q Consensus 4 ~~v~~i~~~-~~~~a~~~~~gtiklW~~~tg~~l~tl~-------------~~~~~~v~sv~~spdg~~l~s~s~~~~~d 69 (389)
..|.+|... ...|-++...+-+.+++..+++...... +-..+.|++++..++|..-+. ..+
T Consensus 258 ~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWig-----t~~ 332 (781)
T 3v9f_A 258 SYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIG-----TWG 332 (781)
T ss_dssp CCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEE-----EBS
T ss_pred ceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEE-----ecC
Confidence 458888876 5667777774556678887655432211 112367999999999985544 233
Q ss_pred CcceeeeeeeEeEeccCCCCCcceeEee-------e--cccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEE---
Q 016446 70 FSSLKCRSTKIEYIRRGKPDSGFALFES-------E--SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY--- 137 (389)
Q Consensus 70 ~~~l~~~~~~l~~i~~g~~~~~~~l~~~-------~--~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~--- 137 (389)
.-+..++...+.+ ..+.. . ....+.++..+ ++|.+.+ |+.++-+..+|..+++...
T Consensus 333 ------~Gl~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~v~~i~~d-~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~ 400 (781)
T 3v9f_A 333 ------GGINFISNAPPTF----HTWSYSPTQMNESSLSNKVVSSVCDD-GQGKLWI-GTDGGGINVFENGKRVAIYNKE 400 (781)
T ss_dssp ------SCEEEECSSCCSC----EEEC----CCCSSCCSSSCEEEEEEC-TTSCEEE-EEBSSCEEEEETTEEEEECC--
T ss_pred ------CeEEEeCCCCCcc----eeeccCccccccCCCCCcceEEEEEc-CCCCEEE-EeCCCcEEEEECCCCeEEEccC
Confidence 2233333333322 01110 0 12345678886 7888765 4545668888976655332
Q ss_pred --EecCCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEe--ecCCceeEEEEEecCCCeEEEEeCCCcEEE
Q 016446 138 --SISDKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFY--HLLHRNKKVDFIEQFNEKLLVKQENENLQI 212 (389)
Q Consensus 138 --tl~~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~--~~~~~~~~v~f~~~~~~~l~~~s~D~tIkl 212 (389)
.+....|+++... +|.+. ++... +-+..+|..+|+...-.. .....+.++... ..+.|.++.. +-|.+
T Consensus 401 ~~~~~~~~v~~i~~d~~g~lW-igt~~---~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d--~~g~lwigt~-~Gl~~ 473 (781)
T 3v9f_A 401 NRELLSNSVLCSLKDSEGNLW-FGTYL---GNISYYNTRLKKFQIIELEKNELLDVRVFYED--KNKKIWIGTH-AGVFV 473 (781)
T ss_dssp ---CCCSBEEEEEECTTSCEE-EEETT---EEEEEECSSSCEEEECCSTTTCCCCEEEEEEC--TTSEEEEEET-TEEEE
T ss_pred CCCCCCcceEEEEECCCCCEE-EEecc---CCEEEEcCCCCcEEEeccCCCCCCeEEEEEEC--CCCCEEEEEC-CceEE
Confidence 2335689999988 55554 44322 468889988876543211 012345555432 2467777766 56889
Q ss_pred EECCCCeEEEEcccC-----CCceEEEEEcCCCcEEEEEc-CCeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCC
Q 016446 213 LDVRNAELMEVSRTE-----FMTPSAFIFLYENQLFLTFR-NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQD 286 (389)
Q Consensus 213 Wd~~tg~~~~~l~gh-----~~~v~sv~fspdg~~laS~s-D~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~ 286 (389)
+|.++++........ ...|.+++..++|++.+... +| +-.+|.++..+..+..... .+...|.+++..++|+
T Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~~~~~~~-l~~~~i~~i~~d~~g~ 551 (781)
T 3v9f_A 474 IDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRKFNQYEG-FCSNTINQIYRSSKGQ 551 (781)
T ss_dssp EESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEEEECTTTT-CSCSCEEEEEECTTSC
T ss_pred EeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEEccCCCC-CCCCeeEEEEECCCCC
Confidence 999988765543222 46799999999999998876 56 5568887555555542211 1223489999999999
Q ss_pred EEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEE
Q 016446 287 LIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSL 366 (389)
Q Consensus 287 ~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~sv 366 (389)
+.++.. .|-|..+|..+++. ..+....+.+. ..|.++
T Consensus 552 lWi~T~------------~Glv~~~d~~~~~~-~~~~~~~gl~~------------------------------~~i~~i 588 (781)
T 3v9f_A 552 MWLATG------------EGLVCFPSARNFDY-QVFQRKEGLPN------------------------------THIRAI 588 (781)
T ss_dssp EEEEET------------TEEEEESCTTTCCC-EEECGGGTCSC------------------------------CCCCEE
T ss_pred EEEEEC------------CCceEEECCCCCcE-EEccccCCCCC------------------------------ceEEEE
Confidence 888643 25548899877764 33432221100 357788
Q ss_pred EECCCCCEEEEecCCCcE
Q 016446 367 FYDEERNEIYTGNRHGLV 384 (389)
Q Consensus 367 afSpdg~~LaSgs~D~tI 384 (389)
..+++|++.+++ .+|.+
T Consensus 589 ~~d~~g~lW~~t-~~Gl~ 605 (781)
T 3v9f_A 589 SEDKNGNIWAST-NTGIS 605 (781)
T ss_dssp EECSSSCEEEEC-SSCEE
T ss_pred EECCCCCEEEEc-CCceE
Confidence 888888877765 44543
No 256
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.84 E-value=1.5e-06 Score=81.99 Aligned_cols=179 Identities=11% Similarity=0.043 Sum_probs=128.9
Q ss_pred eeEEEecCCCeEEEEecCC--CeEEEEeCCCCeEEEEec-CCcE--EEEEEcCCceEEEEecCCCCeeEEEEEcCCCeEE
Q 016446 104 GFVEFDDVNGKVLTYSAQD--SIYKVFDLKNYTMLYSIS-DKHV--QEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVL 178 (389)
Q Consensus 104 ~~v~Fs~pdG~~Las~s~D--~tiklWdl~~g~~l~tl~-~~~V--~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~l 178 (389)
..++|+ + +++..|.+.+ ..|+..|+++|+.+.+.. .... ..+++. +++|.... -.++.+.++|.+|++.+
T Consensus 24 qGL~~~-~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~lt--w~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 24 EGLFYL-R-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLT--WRNHEGFVYDLATLTPR 98 (243)
T ss_dssp EEEEEE-T-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEE--SSSSEEEEEETTTTEEE
T ss_pred ccEEEE-C-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEE--eeCCEEEEEECCcCcEE
Confidence 459997 4 8888888886 499999999999988775 3333 445554 45555553 33479999999999999
Q ss_pred EEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCC-----CceEEEEEcCCCcEEEEEc-CCeEE
Q 016446 179 KVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEF-----MTPSAFIFLYENQLFLTFR-NRTVA 252 (389)
Q Consensus 179 ~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~-----~~v~sv~fspdg~~laS~s-D~tIk 252 (389)
.+++... .=+.++ ++++.|.++..+.+|.++|.++.+.+.+++-.. ..++.+.+. +|++.|... +..|.
T Consensus 99 ~ti~~~~-~Gwglt---~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~ 173 (243)
T 3mbr_X 99 ARFRYPG-EGWALT---SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIA 173 (243)
T ss_dssp EEEECSS-CCCEEE---ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEE
T ss_pred EEEeCCC-CceEEe---eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEE
Confidence 9998432 224444 567788887678999999999998877654321 234555544 899998887 88999
Q ss_pred EEeCC-CcEEEEeccCcC--------CcCCCCeeEEEECCCCCEEEEEe
Q 016446 253 VWNFR-GELVTSFEDHLL--------WHPDCNTNNIYITSDQDLIISYC 292 (389)
Q Consensus 253 lWd~~-G~~l~tl~gh~~--------~~~~~~v~sv~fSpdG~~laS~s 292 (389)
+-|.. |+.+.++.-... .......+.||++|+++.|...+
T Consensus 174 vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 174 RIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 99996 999887762211 00122468999999988877754
No 257
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.84 E-value=4.9e-07 Score=86.38 Aligned_cols=204 Identities=12% Similarity=0.048 Sum_probs=133.1
Q ss_pred eEEEEecC---CcEEEEEEcCCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEE-EeCCCc
Q 016446 134 TMLYSISD---KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLV-KQENEN 209 (389)
Q Consensus 134 ~~l~tl~~---~~V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~-~s~D~t 209 (389)
+.+.+++. .....+.|+++. |..+. +.++.|+..|++||+.++++ - ....+..-.. +++++|.. .-.++.
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~~~-Ly~st--G~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit-~~g~~Ly~ltw~~~~ 117 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQGH-FFEST--GHQGTLRQLSLESAQPVWME-R-LGNIFAEGLA-SDGERLYQLTWTEGL 117 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEETTE-EEEEE--TTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEE-ECSSCEEEEESSSCE
T ss_pred EEEEEEcCCCccccceEEEECCE-EEEEc--CCCCEEEEEECCCCcEEeEE-C-CCCcceeEEE-EeCCEEEEEEccCCE
Confidence 44566652 468899998654 44442 44567999999999999988 2 2444442222 34555555 458999
Q ss_pred EEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCE
Q 016446 210 LQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDL 287 (389)
Q Consensus 210 IklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~ 287 (389)
+.++|.++++.+.++.-- ..-+.++ +||+.|..+. +++|.+.|.+ .+.+++++--....+-..++.+.+. ||+.
T Consensus 118 v~V~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~l 193 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVI 193 (268)
T ss_dssp EEEEETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEE
Confidence 999999999999987642 2234444 6777776666 8999999996 8888877632221111125677776 8876
Q ss_pred EEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEE
Q 016446 288 IISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLF 367 (389)
Q Consensus 288 laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~sva 367 (389)
.|.... +++|.+-|.+||+.+.++.-....+. .... .....+.-+.+|
T Consensus 194 yanvw~-----------s~~I~vIDp~TG~V~~~Idl~~L~~~--~~~~-------------------~~~~~~vlNGIA 241 (268)
T 3nok_A 194 YANIWH-----------SSDVLEIDPATGTVVGVIDASALTRA--VAGQ-------------------VTNPEAVLNGIA 241 (268)
T ss_dssp EEEETT-----------CSEEEEECTTTCBEEEEEECHHHHHH--HTTT-------------------CCCTTCCEEEEE
T ss_pred EEEECC-----------CCeEEEEeCCCCcEEEEEECCCCccc--cccc-------------------ccCcCCceEEEE
Confidence 665433 37999999999999999864320000 0000 000114678899
Q ss_pred ECCCCCEEEEec
Q 016446 368 YDEERNEIYTGN 379 (389)
Q Consensus 368 fSpdg~~LaSgs 379 (389)
|+|++++|.-.+
T Consensus 242 ~dp~~~rlfVTG 253 (268)
T 3nok_A 242 VEPGSGRIFMTG 253 (268)
T ss_dssp ECTTTCCEEEEE
T ss_pred EcCCCCEEEEeC
Confidence 999987776665
No 258
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.83 E-value=7e-07 Score=85.32 Aligned_cols=179 Identities=10% Similarity=0.044 Sum_probs=129.9
Q ss_pred eeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEe-cCC-cEEEEEEcCCceEEEEecCCCCeeEEEEEcCCCeEEEEE
Q 016446 104 GFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-SDK-HVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVF 181 (389)
Q Consensus 104 ~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl-~~~-~V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~l~tl 181 (389)
..++|+ ++++..|.+.++.|+..|+++|+.+.++ ... .-..+++.+ ++|.... -.++.+.++|.+|++.++++
T Consensus 58 qGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g-~~Ly~lt--w~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDG-ERLYQLT--WTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp EEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECS-SCEEEEE--SSSCEEEEEETTTTEEEEEE
T ss_pred ceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeC-CEEEEEE--ccCCEEEEEECCcCcEEEEE
Confidence 468997 5899999999999999999999976554 322 234566654 4554443 33579999999999999999
Q ss_pred eecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEccc--CC---CceEEEEEcCCCcEEEEEc-CCeEEEEe
Q 016446 182 YHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT--EF---MTPSAFIFLYENQLFLTFR-NRTVAVWN 255 (389)
Q Consensus 182 ~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~g--h~---~~v~sv~fspdg~~laS~s-D~tIklWd 255 (389)
+.- ..-+.++ ++++.|..+..+++|.++|.++.+.+.++.- +. ..++.+.|. +|++.|... +.+|-+=|
T Consensus 133 ~~~-~eGwGLt---~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vID 207 (268)
T 3nok_A 133 RYS-GEGWGLC---YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEID 207 (268)
T ss_dssp ECS-SCCCCEE---EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEEC
T ss_pred eCC-CceeEEe---cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEe
Confidence 852 3235555 4578888877799999999999998776532 21 244666666 889998887 88999999
Q ss_pred CC-CcEEEEeccCc--------CCcCCCCeeEEEECCCCCEEEEEe
Q 016446 256 FR-GELVTSFEDHL--------LWHPDCNTNNIYITSDQDLIISYC 292 (389)
Q Consensus 256 ~~-G~~l~tl~gh~--------~~~~~~~v~sv~fSpdG~~laS~s 292 (389)
.. |+.+.++.-.. ....+...+.||++|+++.|...+
T Consensus 208 p~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 208 PATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 96 99988776321 011122468999999877666644
No 259
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.82 E-value=5.3e-06 Score=78.67 Aligned_cols=232 Identities=12% Similarity=0.059 Sum_probs=142.0
Q ss_pred cceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecC
Q 016446 32 TNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDV 111 (389)
Q Consensus 32 tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~p 111 (389)
+.+.+.++... .....++++|+|+.+++ ...+ ..+..++ ..|+. ...+. ....|..++|+ |
T Consensus 21 ~~~~~~~~p~~--~~pegia~~~~g~lyv~----d~~~------~~I~~~d-~~g~~---~~~~~--~~~~p~gia~~-~ 81 (306)
T 2p4o_A 21 PAKIITSFPVN--TFLENLASAPDGTIFVT----NHEV------GEIVSIT-PDGNQ---QIHAT--VEGKVSGLAFT-S 81 (306)
T ss_dssp CEEEEEEECTT--CCEEEEEECTTSCEEEE----ETTT------TEEEEEC-TTCCE---EEEEE--CSSEEEEEEEC-T
T ss_pred CceEeEeCCCC--CCcceEEECCCCCEEEE----eCCC------CeEEEEC-CCCce---EEEEe--CCCCceeEEEc-C
Confidence 45667777643 56789999999995555 1223 3444444 34443 11222 23457789998 8
Q ss_pred CCeEEEEecCCC--eEEEEeCCCCeEEE--EecC-CcEEEEEEcCCceEEEEecCCCCeeEEEEEcCCCeE-EEEEee--
Q 016446 112 NGKVLTYSAQDS--IYKVFDLKNYTMLY--SISD-KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTV-LKVFYH-- 183 (389)
Q Consensus 112 dG~~Las~s~D~--tiklWdl~~g~~l~--tl~~-~~V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~-l~tl~~-- 183 (389)
||+++++..... .|..+|..+|+... .+.. ..-..+++.++.++..+. ...+.|...|..+|+. +.....
T Consensus 82 dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d--~~~g~i~~~d~~~~~~~v~~~~~~~ 159 (306)
T 2p4o_A 82 NGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTAD--SYRGAIWLIDVVQPSGSIWLEHPML 159 (306)
T ss_dssp TSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEE--TTTTEEEEEETTTTEEEEEEECGGG
T ss_pred CCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEE--CCCCeEEEEeCCCCcEeEEEECCcc
Confidence 999877664432 35556777888543 2222 344567777666655553 2346788888776542 211110
Q ss_pred -------cCCceeEEEEEecCCCeEEEE-eCCCcEEEEECCC-CeE--EEEcccCCCceEEEEEcCCCcEEEEEc-CCeE
Q 016446 184 -------LLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRN-AEL--MEVSRTEFMTPSAFIFLYENQLFLTFR-NRTV 251 (389)
Q Consensus 184 -------~~~~~~~v~f~~~~~~~l~~~-s~D~tIklWd~~t-g~~--~~~l~gh~~~v~sv~fspdg~~laS~s-D~tI 251 (389)
....-..+ + ++++.+..+ ...++|..+|+.. |+. .+.+.. ...+..+++.|+|++.++.. .+.|
T Consensus 160 ~~~~~~~~~~~pngi--s-~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V 235 (306)
T 2p4o_A 160 ARSNSESVFPAANGL--K-RFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSV 235 (306)
T ss_dssp SCSSTTCCSCSEEEE--E-EETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCE
T ss_pred ccccccCCCCcCCCc--C-cCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeE
Confidence 11122344 3 667777665 5789999999875 432 222211 13567789999999988887 8899
Q ss_pred EEEeCCCcEEE--EeccCcCCcCCCCeeEEEEC---CCCCEEEEEec
Q 016446 252 AVWNFRGELVT--SFEDHLLWHPDCNTNNIYIT---SDQDLIISYCK 293 (389)
Q Consensus 252 klWd~~G~~l~--tl~gh~~~~~~~~v~sv~fS---pdG~~laS~s~ 293 (389)
..+|.+|++.. .+..... ...+++|. ||+++|...+.
T Consensus 236 ~~~~~~G~~~~~~~~~~~~~-----~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 236 VRIAPDRSTTIIAQAEQGVI-----GSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEECTTCCEEEEECGGGTCT-----TEEEEEECCSTTTTTEEEEEEC
T ss_pred EEECCCCCEEEEeecccccC-----CceEEEEecccCCCCEEEEECC
Confidence 99999898743 3332211 25899999 99887776553
No 260
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.79 E-value=2.1e-07 Score=98.03 Aligned_cols=236 Identities=9% Similarity=0.028 Sum_probs=159.3
Q ss_pred ccEEEEEec-CceEEEEecccceeeeeeecCCcceEEEEEE-e-eCCCEEEEEEEeec---CCCcce-----eeeeeeEe
Q 016446 13 RDIVFALAH-SGVCAAFSRETNRRICFLNVSPDEVIRSLFY-N-KNNDSLITVSVYAS---DNFSSL-----KCRSTKIE 81 (389)
Q Consensus 13 ~~~~a~~~~-~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~-s-pdg~~l~s~s~~~~---~d~~~l-----~~~~~~l~ 81 (389)
|.++.+... +.+|.+-|+++.++.+.+.-........+++ + |+++++..+..+.. .|-..| --..+.+.
T Consensus 101 G~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvI 180 (595)
T 1fwx_A 101 GRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAV 180 (595)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEE
T ss_pred CCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEE
Confidence 455555544 6679999999999999443222245788888 5 99999887643211 000000 01345556
Q ss_pred EeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCC--------------------------------------
Q 016446 82 YIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDS-------------------------------------- 123 (389)
Q Consensus 82 ~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~-------------------------------------- 123 (389)
|..+.++ +|+-..-+.+..++++ |||+++.+.+.+.
T Consensus 181 D~~t~~v-----~~qI~Vgg~pd~~~~s-pdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 181 DADKWEV-----AWQVLVSGNLDNCDAD-YEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp ETTTTEE-----EEEEEESSCCCCEEEC-SSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred ECCCCeE-----EEEEEeCCCccceEEC-CCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 6565554 5654443467789998 8999988887543
Q ss_pred eEEEEeCCC--CeE-EEEec-CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCe------------EEEEEeecCC
Q 016446 124 IYKVFDLKN--YTM-LYSIS-DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGT------------VLKVFYHLLH 186 (389)
Q Consensus 124 tiklWdl~~--g~~-l~tl~-~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~------------~l~tl~~~~~ 186 (389)
.|.+-|.++ ++. +.++. +....+|+|| ||+++.++. ..+.+|.+.|+.+.+ ...+++ -..
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~--~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~ 331 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAG--KLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGL 331 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEEC--TTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCS
T ss_pred cEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeC--CCCCeEEEEECcccccccccccCcccceEEEcC-CCC
Confidence 588999887 665 66776 5677889999 688887774 445799999998753 445544 123
Q ss_pred ceeEEEEEecCCCeEEEE-eCCCcEEEEECCC----------CeEEEEcccCCCc-----eEEEEEcCCCcEEEEEc---
Q 016446 187 RNKKVDFIEQFNEKLLVK-QENENLQILDVRN----------AELMEVSRTEFMT-----PSAFIFLYENQLFLTFR--- 247 (389)
Q Consensus 187 ~~~~v~f~~~~~~~l~~~-s~D~tIklWd~~t----------g~~~~~l~gh~~~-----v~sv~fspdg~~laS~s--- 247 (389)
.-+-++|. ++| .+.+. -.|.+|-.||+++ .+.++.+.-|... ...++++|||++|.++.
T Consensus 332 gP~h~aF~-~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~s 409 (595)
T 1fwx_A 332 GPLHTAFD-GRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFS 409 (595)
T ss_dssp CEEEEEEC-TTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCC
T ss_pred CcceEEEC-CCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCC
Confidence 45788897 666 55444 4999999999988 5677777666542 23346699999999984
Q ss_pred -CCe----------EEEEeCCCc
Q 016446 248 -NRT----------VAVWNFRGE 259 (389)
Q Consensus 248 -D~t----------IklWd~~G~ 259 (389)
|+- -.|.|++|.
T Consensus 410 kdr~~~~gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 410 KDRFLNVGPLKPENDQLIDISGD 432 (595)
T ss_dssp TTSSCCCCSSCCEEEEEEECSSS
T ss_pred ccccccCCCCCCCcceEEEcCCC
Confidence 432 289999843
No 261
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.73 E-value=1.6e-06 Score=91.51 Aligned_cols=291 Identities=9% Similarity=-0.028 Sum_probs=162.5
Q ss_pred EEEEee-CCCEEEEEEEeecCCCc--ceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEec-CCCe
Q 016446 49 SLFYNK-NNDSLITVSVYASDNFS--SLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA-QDSI 124 (389)
Q Consensus 49 sv~~sp-dg~~l~s~s~~~~~d~~--~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s-~D~t 124 (389)
++++.| +|+.++.+... .+.|. .-....+.+||..+++......+-. ....+-.++++. +||++++.|+ .+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~-~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~-~~~~~~~~~~~~-~~g~lyv~GG~~~~~ 266 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYR-NDAFGGSPGGITLTSSWDPSTGIVSDRTVTVT-KHDMFCPGISMD-GNGQIVVTGGNDAKK 266 (656)
T ss_dssp EEEEETTTTEEEEEEECC-CTTTCSCCCSEEEEEEECTTTCCBCCCEEEEC-SCCCSSCEEEEC-TTSCEEEECSSSTTC
T ss_pred eEEEEecCCEEEEEeccc-ccccccCCCCeEEEEEEeCCCCcEEeCcccCC-CCCCccccccCC-CCCCEEEeCCCCCCc
Confidence 667788 88877774322 11111 0112467789988888632222211 122222357887 8999999999 4568
Q ss_pred EEEEeCCCCeEEE--EecC-CcEEEEEEc-CCceEEEEecCC---CCeeEEEEEcCCCeEEEEEee-----cCCceeEEE
Q 016446 125 YKVFDLKNYTMLY--SISD-KHVQEIKIS-PGIMLLIFNRSS---SHVPLKILSIEDGTVLKVFYH-----LLHRNKKVD 192 (389)
Q Consensus 125 iklWdl~~g~~l~--tl~~-~~V~~vafS-~g~~la~~~~~s---~d~tiklWd~~tG~~l~tl~~-----~~~~~~~v~ 192 (389)
+.+||..+.+-.. .++. .+-.++++. +|.+++.+.... .-.++.+||..+++-... .. .........
T Consensus 267 v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~-~~~~~~p~~~~~~~~~ 345 (656)
T 1k3i_A 267 TSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL-PNAKVNPMLTADKQGL 345 (656)
T ss_dssp EEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE-TTSCSGGGCCCCTTGG
T ss_pred eEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeC-CCccccccccccccce
Confidence 9999998876332 2332 222345555 788887764211 115799999998764432 10 000000000
Q ss_pred EEecCCCeEEEEeC---------CCcEEEEECCCCeEEEEcccCC---------CceEEEEEc-CCCcEEEEEc-CC---
Q 016446 193 FIEQFNEKLLVKQE---------NENLQILDVRNAELMEVSRTEF---------MTPSAFIFL-YENQLFLTFR-NR--- 249 (389)
Q Consensus 193 f~~~~~~~l~~~s~---------D~tIklWd~~tg~~~~~l~gh~---------~~v~sv~fs-pdg~~laS~s-D~--- 249 (389)
+ ..++..++.++. ...+..||.++....+.+..+. ..-.++.|. .++++++.|+ ++
T Consensus 346 ~-~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~ 424 (656)
T 1k3i_A 346 Y-RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQD 424 (656)
T ss_dssp G-TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSS
T ss_pred e-ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCC
Confidence 0 022333344543 3567899998877554433222 133566665 4899999886 53
Q ss_pred --------eEEEEeCC-CcEEEEe--ccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeE
Q 016446 250 --------TVAVWNFR-GELVTSF--EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 318 (389)
Q Consensus 250 --------tIklWd~~-G~~l~tl--~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~ 318 (389)
.|.+||.. .+..... .-+.... -.+.++.|||++++.|+.+.....-....-.++.+||..+++.
T Consensus 425 ~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~----~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W 500 (656)
T 1k3i_A 425 SDATTNAHIITLGEPGTSPNTVFASNGLYFART----FHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTF 500 (656)
T ss_dssp SBCCCCEEEEECCSTTSCCEEEECTTCCSSCCB----SCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEE
T ss_pred CCcCCcceEEEcCCCCCCCeeEEccCCCCCCcc----cCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCce
Confidence 78899986 5543322 1122211 1356778999999999864100000000125789999988765
Q ss_pred EEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecC
Q 016446 319 LAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNR 380 (389)
Q Consensus 319 l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~ 380 (389)
. .+..-. .++ ....+..+.|||++|+.|+.
T Consensus 501 ~-~~~~~~--------~~R-----------------------~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 501 Y-KQNPNS--------IVR-----------------------VYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp E-ECCCCS--------SCC-----------------------CTTEEEEECTTSCEEEEECC
T ss_pred e-ecCCCC--------Ccc-----------------------ccccHhhcCCCcEEEecCCC
Confidence 3 232111 000 12234567899999999995
No 262
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.69 E-value=3e-06 Score=88.68 Aligned_cols=262 Identities=11% Similarity=0.036 Sum_probs=153.5
Q ss_pred EeeccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEee--CCCEEEEEEEeec---CCCcceeeeeeeEeEec
Q 016446 10 VAARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNK--NNDSLITVSVYAS---DNFSSLKCRSTKIEYIR 84 (389)
Q Consensus 10 ~~~~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~sp--dg~~l~s~s~~~~---~d~~~l~~~~~~l~~i~ 84 (389)
...++.|.+++.|+.+..+|.+||+.+-.........-..+.-+| .+..|+.++. +. .+ ..+.-.|..
T Consensus 112 ~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~-~~~~~~~------g~v~a~D~~ 184 (571)
T 2ad6_A 112 AYGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCS-GAELGVR------GAVNAFDLK 184 (571)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECB-CGGGTCC------CEEEEEETT
T ss_pred EEECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEec-CCccCCC------CEEEEEECC
Confidence 445888999999999999999999988765542100001111222 2334444221 11 13 466667778
Q ss_pred cCCCCCcceeEeeecccCc---------------------------------------eeEEEecCCCeEEEEecC----
Q 016446 85 RGKPDSGFALFESESLKWP---------------------------------------GFVEFDDVNGKVLTYSAQ---- 121 (389)
Q Consensus 85 ~g~~~~~~~l~~~~~~~~~---------------------------------------~~v~Fs~pdG~~Las~s~---- 121 (389)
+|+. +|........ ..+++++.+|.+.+..+.
T Consensus 185 tG~~-----~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~ 259 (571)
T 2ad6_A 185 TGEL-----KWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPW 259 (571)
T ss_dssp TCCE-----EEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCS
T ss_pred CCcE-----EEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccc
Confidence 8876 4542211100 136787334544443221
Q ss_pred -------C----CeEEEEeCCCCeEEEEecC--C------cEEEEEE---c-CCc---eEEEEecCCCCeeEEEEEcCCC
Q 016446 122 -------D----SIYKVFDLKNYTMLYSISD--K------HVQEIKI---S-PGI---MLLIFNRSSSHVPLKILSIEDG 175 (389)
Q Consensus 122 -------D----~tiklWdl~~g~~l~tl~~--~------~V~~vaf---S-~g~---~la~~~~~s~d~tiklWd~~tG 175 (389)
| +.|.-+|+++|+.+...+. + .+.+..+ . +|+ .++.+ +.++.+...|.+||
T Consensus 260 ~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~---~~~G~l~~lD~~tG 336 (571)
T 2ad6_A 260 NETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHI---DRNGILYTLNRENG 336 (571)
T ss_dssp CGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEE---CTTSEEEEEETTTC
T ss_pred cCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEe---CCCcEEEEEECCCC
Confidence 2 3699999999999876641 1 1222222 2 453 34444 33579999999999
Q ss_pred eEEEEEeecC-------------Cce--------------------------eEEEEEecCCCeEEEEe-----------
Q 016446 176 TVLKVFYHLL-------------HRN--------------------------KKVDFIEQFNEKLLVKQ----------- 205 (389)
Q Consensus 176 ~~l~tl~~~~-------------~~~--------------------------~~v~f~~~~~~~l~~~s----------- 205 (389)
+.+..++... .++ ..++|. |+.+.+.+..
T Consensus 337 ~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~d-p~~g~~yv~~~~~~~~~~~~~ 415 (571)
T 2ad6_A 337 NLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYD-PESRTLYAGLNHICMDWEPFM 415 (571)
T ss_dssp CEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEE-TTTTEEEEEEECEEEEEEECC
T ss_pred CEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceEC-CCCCEEEEEchhccccccccc
Confidence 9998876321 000 234555 4445555432
Q ss_pred --------------------------CCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-
Q 016446 206 --------------------------ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR- 257 (389)
Q Consensus 206 --------------------------~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~- 257 (389)
.++.|..||+.+|+.+-...... .+.+..+...+.++..++ |+.+..+|..
T Consensus 416 ~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~t 494 (571)
T 2ad6_A 416 LPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKD 494 (571)
T ss_dssp CCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTT
T ss_pred cccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCC
Confidence 35899999999999877654332 233333333344444566 9999999996
Q ss_pred CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEe
Q 016446 258 GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYC 292 (389)
Q Consensus 258 G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s 292 (389)
|+++.+++-..... -..+.+.+||+.++...
T Consensus 495 G~~lw~~~~~~~~~----~~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 495 GKELWNFKMPSGGI----GSPMTYSFKGKQYIGSM 525 (571)
T ss_dssp CCEEEEEECSSCCC----SCCEEEEETTEEEEEEE
T ss_pred CCEEEEEeCCCCcE----eeeEEEEECCEEEEEEE
Confidence 99998887433221 13455678998766543
No 263
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.68 E-value=5.9e-06 Score=87.16 Aligned_cols=266 Identities=8% Similarity=-0.027 Sum_probs=153.4
Q ss_pred eccEEEEEecCc-----------eEEEEecccce--eeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeee
Q 016446 12 ARDIVFALAHSG-----------VCAAFSRETNR--RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRST 78 (389)
Q Consensus 12 ~~~~~a~~~~~g-----------tiklW~~~tg~--~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~ 78 (389)
.+++++.+..+. .+.+||..+++ .+..+...+.....++++.++|+.++. |+.+- ..+
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~----GG~~~-----~~v 267 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVT----GGNDA-----KKT 267 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEE----CSSST-----TCE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEe----CCCCC-----Cce
Confidence 367777766443 68899988775 444444433344456888999998887 66441 257
Q ss_pred eEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEec-CC-----CeEEEEeCCCCeEEEE-------ecCCcEE
Q 016446 79 KIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA-QD-----SIYKVFDLKNYTMLYS-------ISDKHVQ 145 (389)
Q Consensus 79 ~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s-~D-----~tiklWdl~~g~~l~t-------l~~~~V~ 145 (389)
.++|..+++......+- ...+-.++++. +||++++.|+ .+ .++.+||.++.+-... +.... .
T Consensus 268 ~~yd~~t~~W~~~~~~~---~~R~~~s~~~~-~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~-~ 342 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQ---VARGYQSSATM-SDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTAD-K 342 (656)
T ss_dssp EEEEGGGTEEEECCCCS---SCCSSCEEEEC-TTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCC-T
T ss_pred EEecCcCCceeECCCCC---ccccccceEEe-cCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccc-c
Confidence 77887766541111110 01111235554 7999999999 44 6799999988774322 11000 0
Q ss_pred EEEEc-CCceEEEEecC------CCCeeEEEEEcCCCeEEEEEeecCC---------ceeEEEEEecCCCeEEEEeCCC-
Q 016446 146 EIKIS-PGIMLLIFNRS------SSHVPLKILSIEDGTVLKVFYHLLH---------RNKKVDFIEQFNEKLLVKQENE- 208 (389)
Q Consensus 146 ~vafS-~g~~la~~~~~------s~d~tiklWd~~tG~~l~tl~~~~~---------~~~~v~f~~~~~~~l~~~s~D~- 208 (389)
..++. ++...+.+..+ .....+..||..+.+....+..+.. .-..+.|...++..+++|+.+.
T Consensus 343 ~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~ 422 (656)
T 1k3i_A 343 QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDY 422 (656)
T ss_dssp TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSS
T ss_pred cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCC
Confidence 01111 22222222111 1235789999998876655543211 1234445333455555666432
Q ss_pred ----------cEEEEECCCCeEEEEc--ccCCCce-EEEEEcCCCcEEEEEc-C-----------CeEEEEeCCCcEEEE
Q 016446 209 ----------NLQILDVRNAELMEVS--RTEFMTP-SAFIFLYENQLFLTFR-N-----------RTVAVWNFRGELVTS 263 (389)
Q Consensus 209 ----------tIklWd~~tg~~~~~l--~gh~~~v-~sv~fspdg~~laS~s-D-----------~tIklWd~~G~~l~t 263 (389)
.|.+||..+.+..+.. .-+.... .+.+..|||++++.|+ + .++.+||.....-..
T Consensus 423 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~ 502 (656)
T 1k3i_A 423 QDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYK 502 (656)
T ss_dssp SSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEE
T ss_pred CCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceee
Confidence 7899999988876654 2222222 3446789999999997 5 578999986333233
Q ss_pred eccCcCCcCCCCeeEEEECCCCCEEEEEec
Q 016446 264 FEDHLLWHPDCNTNNIYITSDQDLIISYCK 293 (389)
Q Consensus 264 l~gh~~~~~~~~v~sv~fSpdG~~laS~s~ 293 (389)
+..-. ++-.+-..+.+.|||++++.|+.
T Consensus 503 ~~~~~--~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 503 QNPNS--IVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCCCS--SCCCTTEEEEECTTSCEEEEECC
T ss_pred cCCCC--CccccccHhhcCCCcEEEecCCC
Confidence 33111 11112245667899999999985
No 264
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.67 E-value=2.2e-05 Score=74.53 Aligned_cols=195 Identities=10% Similarity=0.004 Sum_probs=124.8
Q ss_pred cCceeEEEecC-CCeEEEEecCCCeEEEEeCCCCeEEEEe---cC---CcEEEEEEcC-CceEEEEecC-----------
Q 016446 101 KWPGFVEFDDV-NGKVLTYSAQDSIYKVFDLKNYTMLYSI---SD---KHVQEIKISP-GIMLLIFNRS----------- 161 (389)
Q Consensus 101 ~~~~~v~Fs~p-dG~~Las~s~D~tiklWdl~~g~~l~tl---~~---~~V~~vafS~-g~~la~~~~~----------- 161 (389)
..|..++|+ | +|+++++... +.|..+|..+++..... .+ .....+++.+ .+.|..+...
T Consensus 80 ~~p~gi~~~-~~~g~l~v~d~~-~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~ 157 (322)
T 2fp8_A 80 GRTYDISYN-LQNNQLYIVDCY-YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQI 157 (322)
T ss_dssp CCEEEEEEE-TTTTEEEEEETT-TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHH
T ss_pred CCCceEEEc-CCCCcEEEEECC-CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCccccccccccee
Confidence 357789998 6 7887776444 44888898766532111 11 3578899997 5555555432
Q ss_pred ----CCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEE-eCCCcEEEEECCCC---eEEEEcccCCCceEE
Q 016446 162 ----SSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNA---ELMEVSRTEFMTPSA 233 (389)
Q Consensus 162 ----s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~-s~D~tIklWd~~tg---~~~~~l~gh~~~v~s 233 (389)
..++.|..+|..+|+....... ...-..+++. +++..|..+ ..++.|..+++.++ +. +.+..... +..
T Consensus 158 ~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~-~dg~~lyv~d~~~~~I~~~~~~~~~~~~~-~~~~~~~g-P~g 233 (322)
T 2fp8_A 158 MDTSDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVS-ADSSFVLVAEFLSHQIVKYWLEGPKKGTA-EVLVKIPN-PGN 233 (322)
T ss_dssp HHHTCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEEC-TTSSEEEEEEGGGTEEEEEESSSTTTTCE-EEEEECSS-EEE
T ss_pred hcccCCCceEEEEeCCCCEEEEeccC-CccCcceEEC-CCCCEEEEEeCCCCeEEEEECCCCcCCcc-ceEEeCCC-CCC
Confidence 1236788899888876544332 2344678887 667766665 57799999998752 22 22111222 788
Q ss_pred EEEcCCCcEEEEEcC-----------CeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccC
Q 016446 234 FIFLYENQLFLTFRN-----------RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWME 302 (389)
Q Consensus 234 v~fspdg~~laS~sD-----------~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~ 302 (389)
+++.++|++.++... +.|..+|.+|+.+..+....... ...+.++++ ++|++.++...
T Consensus 234 i~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~-~~~~~~~~~-~~g~L~v~~~~--------- 302 (322)
T 2fp8_A 234 IKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFA-GEHFEQIQE-HDGLLYIGTLF--------- 302 (322)
T ss_dssp EEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTT-TSCCCEEEE-ETTEEEEECSS---------
T ss_pred eEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCc-cccceEEEE-eCCEEEEeecC---------
Confidence 999999998887643 56778888899988886543210 012467777 57776666432
Q ss_pred CCCCeEEEEeCC
Q 016446 303 GSAGSINVSSIL 314 (389)
Q Consensus 303 s~D~tIklWd~~ 314 (389)
.+.|..+++.
T Consensus 303 --~~~i~~~~~~ 312 (322)
T 2fp8_A 303 --HGSVGILVYD 312 (322)
T ss_dssp --CSEEEEEEC-
T ss_pred --CCceEEEecc
Confidence 3688888864
No 265
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.65 E-value=0.00026 Score=75.74 Aligned_cols=321 Identities=13% Similarity=0.026 Sum_probs=187.3
Q ss_pred ccEEEEEee-ccEEEEEecCceEEEEecccceeeeeeec------CCcceEEEEEEeeCCCEEEEEEEeecCCCcceeee
Q 016446 4 TKVIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLNV------SPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCR 76 (389)
Q Consensus 4 ~~v~~i~~~-~~~~a~~~~~gtiklW~~~tg~~l~tl~~------~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~ 76 (389)
..|..|... ...|-++..+ -+.+|+..+++....... -....|++++..++|...+. ... .
T Consensus 211 ~~i~~i~~d~~g~lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-----t~~------~ 278 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIA-----TEL------N 278 (781)
T ss_dssp SSEEEEEECTTCCEEEEETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEEE-----ESS------S
T ss_pred CceeEEEEcCCCCEEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEE-----eCC------C
Confidence 457777776 3445555555 467889876665432211 11367999999999986654 232 2
Q ss_pred eeeEeEeccCCCCCcce-eEe---e------ecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEE--------
Q 016446 77 STKIEYIRRGKPDSGFA-LFE---S------ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS-------- 138 (389)
Q Consensus 77 ~~~l~~i~~g~~~~~~~-l~~---~------~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~t-------- 138 (389)
-+.+.+...+++..... .|. . -....+.++..+ ++|.+.+ |..++-|..++..++....-
T Consensus 279 Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D-~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~ 356 (781)
T 3v9f_A 279 GIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQD-SFNNIWI-GTWGGGINFISNAPPTFHTWSYSPTQMN 356 (781)
T ss_dssp CEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEEC-SSCCEEE-EEBSSCEEEECSSCCSCEEEC----CCC
T ss_pred CeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEe-CCCCEEE-EecCCeEEEeCCCCCcceeeccCccccc
Confidence 23344444443210000 000 0 011235678886 7887665 55667788888766553221
Q ss_pred ---ecCCcEEEEEEcCCceEEEEecCCCCeeEEEEEcCCCeEEEEE---eecCCceeEEEEEecCCCeEEEEeCCCcEEE
Q 016446 139 ---ISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVF---YHLLHRNKKVDFIEQFNEKLLVKQENENLQI 212 (389)
Q Consensus 139 ---l~~~~V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~l~tl---~~~~~~~~~v~f~~~~~~~l~~~s~D~tIkl 212 (389)
+....|.++...+.+.|-++..+ +-|.++|..+++...-. ......+.++... ..+.|-++..++-|..
T Consensus 357 ~~~l~~~~v~~i~~d~~g~lWigt~~---~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d--~~g~lWigt~~~Gl~~ 431 (781)
T 3v9f_A 357 ESSLSNKVVSSVCDDGQGKLWIGTDG---GGINVFENGKRVAIYNKENRELLSNSVLCSLKD--SEGNLWFGTYLGNISY 431 (781)
T ss_dssp SSCCSSSCEEEEEECTTSCEEEEEBS---SCEEEEETTEEEEECC-----CCCSBEEEEEEC--TTSCEEEEETTEEEEE
T ss_pred cCCCCCcceEEEEEcCCCCEEEEeCC---CcEEEEECCCCeEEEccCCCCCCCcceEEEEEC--CCCCEEEEeccCCEEE
Confidence 12357999999843334444322 34888897765433211 1112345555542 2567777888778999
Q ss_pred EECCCCeEEEEcc--cCCCceEEEEEcCCCcEEEEEcCCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEE
Q 016446 213 LDVRNAELMEVSR--TEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLII 289 (389)
Q Consensus 213 Wd~~tg~~~~~l~--gh~~~v~sv~fspdg~~laS~sD~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~la 289 (389)
+|.++++...... -....|.+++..++|++.+... +-+..+|.. ++...-............|.+++..++|++.+
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi 510 (781)
T 3v9f_A 432 YNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI 510 (781)
T ss_dssp ECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE
T ss_pred EcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE
Confidence 9999888765432 2456899999999999888766 557788886 55433221110000112389999999999988
Q ss_pred EEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEEC
Q 016446 290 SYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYD 369 (389)
Q Consensus 290 S~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafS 369 (389)
.... +-|..+|..+++.. .+...... ....|.++..+
T Consensus 511 gt~~------------~Gl~~~~~~~~~~~-~~~~~~~l------------------------------~~~~i~~i~~d 547 (781)
T 3v9f_A 511 GTFG------------GGVGIYTPDMQLVR-KFNQYEGF------------------------------CSNTINQIYRS 547 (781)
T ss_dssp EESS------------SCEEEECTTCCEEE-EECTTTTC------------------------------SCSCEEEEEEC
T ss_pred EEcC------------CCEEEEeCCCCeEE-EccCCCCC------------------------------CCCeeEEEEEC
Confidence 6431 34677997766543 34321100 01479999999
Q ss_pred CCCCEEEEecCCCcEEEcc
Q 016446 370 EERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 370 pdg~~LaSgs~D~tIrlW~ 388 (389)
++|++.++.. +|.|..+|
T Consensus 548 ~~g~lWi~T~-~Glv~~~d 565 (781)
T 3v9f_A 548 SKGQMWLATG-EGLVCFPS 565 (781)
T ss_dssp TTSCEEEEET-TEEEEESC
T ss_pred CCCCEEEEEC-CCceEEEC
Confidence 9999887766 66644443
No 266
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.63 E-value=9.9e-06 Score=85.49 Aligned_cols=217 Identities=12% Similarity=0.010 Sum_probs=130.9
Q ss_pred eEEEecCCCe---EEEEecCCCeEEEEeCCCCeEEEEecC-C-----cEEE-EEEcCCceEEEEecCC---CCeeEEEEE
Q 016446 105 FVEFDDVNGK---VLTYSAQDSIYKVFDLKNYTMLYSISD-K-----HVQE-IKISPGIMLLIFNRSS---SHVPLKILS 171 (389)
Q Consensus 105 ~v~Fs~pdG~---~Las~s~D~tiklWdl~~g~~l~tl~~-~-----~V~~-vafS~g~~la~~~~~s---~d~tiklWd 171 (389)
.+++++.+|+ .|..++.|+.+.-.|.++|+++..... . .+.+ -.+.+| ++.+++... .++.|+-+|
T Consensus 110 g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g-~V~vg~~g~e~g~~g~v~A~D 188 (599)
T 1w6s_A 110 GLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKD-KVIIGSSGAELGVRGYLTAYD 188 (599)
T ss_dssp CCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETT-EEEECCBCGGGTCCCEEEEEE
T ss_pred ceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECC-EEEEEecccccCCCCeEEEEE
Confidence 4677522343 155577899999999999998866531 1 2221 122234 454443211 368999999
Q ss_pred cCCCeEEEEEeecCCc-------------------------------------ee-EEEEEecCCCeEEEEeCC------
Q 016446 172 IEDGTVLKVFYHLLHR-------------------------------------NK-KVDFIEQFNEKLLVKQEN------ 207 (389)
Q Consensus 172 ~~tG~~l~tl~~~~~~-------------------------------------~~-~v~f~~~~~~~l~~~s~D------ 207 (389)
.+||+++-++...... ++ ..++. +..+.+..+..+
T Consensus 189 ~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d-~~~g~vy~g~g~~~p~~~ 267 (599)
T 1w6s_A 189 VKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYD-PGTNLIYFGTGNPAPWNE 267 (599)
T ss_dssp TTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEE-TTTTEEEEECCCCSCSCG
T ss_pred CCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEe-CCCCEEEEeCCCCccccC
Confidence 9999999888632111 01 22333 345666666544
Q ss_pred ----------CcEEEEECCCCeEEEEccc--CCC-------ceEEEEEc-CCC---cEEEEEc-CCeEEEEeCC-CcEEE
Q 016446 208 ----------ENLQILDVRNAELMEVSRT--EFM-------TPSAFIFL-YEN---QLFLTFR-NRTVAVWNFR-GELVT 262 (389)
Q Consensus 208 ----------~tIklWd~~tg~~~~~l~g--h~~-------~v~sv~fs-pdg---~~laS~s-D~tIklWd~~-G~~l~ 262 (389)
.+|.-+|.+||+.+-.++. |.. ...-+... .+| ++++.++ +|.+.+.|.+ |+++.
T Consensus 268 ~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw 347 (599)
T 1w6s_A 268 TMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVS 347 (599)
T ss_dssp GGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred cccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEee
Confidence 4899999999999765543 321 11112222 578 5777777 9999999996 99886
Q ss_pred EeccCc-------------CCcC--------C-------------CCeeEEEECCCCCEEEEEecCCCc-----------
Q 016446 263 SFEDHL-------------LWHP--------D-------------CNTNNIYITSDQDLIISYCKAEPE----------- 297 (389)
Q Consensus 263 tl~gh~-------------~~~~--------~-------------~~v~sv~fSpdG~~laS~s~D~~~----------- 297 (389)
..+-.. .++. . ..=.+++|+|+.+++.....+-+.
T Consensus 348 ~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~ 427 (599)
T 1w6s_A 348 ANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKA 427 (599)
T ss_dssp EEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCT
T ss_pred cccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccC
Confidence 654110 0000 0 000367899998888775432100
Q ss_pred cc--c------c---CC------CCCeEEEEeCCCCeEEEEec
Q 016446 298 DQ--W------M---EG------SAGSINVSSILTGKCLAKIN 323 (389)
Q Consensus 298 ~~--~------~---~s------~D~tIklWd~~tg~~l~tl~ 323 (389)
.+ + . .+ .+|.|.-||+.||+.+...+
T Consensus 428 g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~ 470 (599)
T 1w6s_A 428 GQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKM 470 (599)
T ss_dssp TSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEec
Confidence 00 0 0 12 45899999999999988775
No 267
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.62 E-value=8.2e-06 Score=85.63 Aligned_cols=180 Identities=11% Similarity=0.008 Sum_probs=108.1
Q ss_pred eeEeEeccCCCCCcceeEeeecccC----------ceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEecC-C----
Q 016446 78 TKIEYIRRGKPDSGFALFESESLKW----------PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-K---- 142 (389)
Q Consensus 78 ~~l~~i~~g~~~~~~~l~~~~~~~~----------~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~~-~---- 142 (389)
+.-.|..+|+. +|..+.... ...+++. +++ |..++.|+.+.-.|+++|+++..... .
T Consensus 80 v~AlD~~tG~~-----~W~~~~~~~~~~~~~~~~~~~g~a~~--~~~-v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~ 151 (582)
T 1flg_A 80 LFALDAKTGKR-----LWTYNHRLPDDIRPCCDVVNRGAAIY--GDK-VFFGTLDASVVALNKNTGKVVWKKKFADHGAG 151 (582)
T ss_dssp EEEEESSSCCE-----EEEEECCCCTTCCCSSCSCCCCCEEE--TTE-EEEEETTTEEEEEESSSCCEEEEEECSCGGGT
T ss_pred EEEEECCCCcE-----EEEEcCCCCcccccccccCCCccEEE--CCE-EEEEeCCCEEEEEECCCCCEEeeecCCCCCcC
Confidence 44456678876 666332211 1234553 455 44467899999999999998866541 1
Q ss_pred -cEE-EEEEcCC----c-eEEEEecC---CCCeeEEEEEcCCCeEEEEEeecCCc-------------------------
Q 016446 143 -HVQ-EIKISPG----I-MLLIFNRS---SSHVPLKILSIEDGTVLKVFYHLLHR------------------------- 187 (389)
Q Consensus 143 -~V~-~vafS~g----~-~la~~~~~---s~d~tiklWd~~tG~~l~tl~~~~~~------------------------- 187 (389)
.+. +-.+.++ + ++.++... +.++.|.-+|.+||+++-+.......
T Consensus 152 ~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~ 231 (582)
T 1flg_A 152 YTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRN 231 (582)
T ss_dssp CBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTT
T ss_pred cccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCCCccc
Confidence 121 1122222 2 45444321 13679999999999999876531000
Q ss_pred ---------------e-eEEEEEecCCCeEEEEeC--------------------C----CcEEEEECCCCeEEEEcc--
Q 016446 188 ---------------N-KKVDFIEQFNEKLLVKQE--------------------N----ENLQILDVRNAELMEVSR-- 225 (389)
Q Consensus 188 ---------------~-~~v~f~~~~~~~l~~~s~--------------------D----~tIklWd~~tg~~~~~l~-- 225 (389)
+ ...++. +..+.+..+.. | +.|.-+|.+||+.+-.++
T Consensus 232 ~~~g~~~~~~~gGg~~w~~~a~d-~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~ 310 (582)
T 1flg_A 232 SPTGKVESWSHGGGAPWQSASFD-AETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHT 310 (582)
T ss_dssp STTSBCGGGGGCBCCCCSCCEEE-TTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESS
T ss_pred cccccccccccCCccccCCceEc-CCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCC
Confidence 0 123333 34466665542 3 689999999999977653
Q ss_pred cCCC-------ceEEEEEc-CCCc---EEEEEc-CCeEEEEeCC-CcEEEEecc
Q 016446 226 TEFM-------TPSAFIFL-YENQ---LFLTFR-NRTVAVWNFR-GELVTSFED 266 (389)
Q Consensus 226 gh~~-------~v~sv~fs-pdg~---~laS~s-D~tIklWd~~-G~~l~tl~g 266 (389)
.|.. ...-+... .+|+ +++.++ +|.+.++|.+ |+++...+-
T Consensus 311 ~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 311 PNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp TTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred CCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccccc
Confidence 3421 11112222 5784 777887 9999999996 998876543
No 268
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.60 E-value=5.7e-07 Score=96.78 Aligned_cols=153 Identities=9% Similarity=-0.038 Sum_probs=97.2
Q ss_pred ceeEEEecCCCeEEEEecC-----CCeEEEEeCCCC-eEEE-EecCCcEEEEEEc-CCceEEEEecCCC--CeeEEEEEc
Q 016446 103 PGFVEFDDVNGKVLTYSAQ-----DSIYKVFDLKNY-TMLY-SISDKHVQEIKIS-PGIMLLIFNRSSS--HVPLKILSI 172 (389)
Q Consensus 103 ~~~v~Fs~pdG~~Las~s~-----D~tiklWdl~~g-~~l~-tl~~~~V~~vafS-~g~~la~~~~~s~--d~tiklWd~ 172 (389)
..+.+||+|||++||.+.. ..+|+++|+.+| +.+. .+. ....+++|| ||+.|+....+.. ...|.++++
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~-~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS-GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE-EECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc-CceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 4568996479999995432 347999999999 6321 111 113468899 6778877654322 146888999
Q ss_pred CCCeEE--EEEee-cCCceeEEEEEecCCCeEEEEe---CCCcEEEEECCCC--eE--EEEcccCCCceEEEEEcCCCcE
Q 016446 173 EDGTVL--KVFYH-LLHRNKKVDFIEQFNEKLLVKQ---ENENLQILDVRNA--EL--MEVSRTEFMTPSAFIFLYENQL 242 (389)
Q Consensus 173 ~tG~~l--~tl~~-~~~~~~~v~f~~~~~~~l~~~s---~D~tIklWd~~tg--~~--~~~l~gh~~~v~sv~fspdg~~ 242 (389)
.+++.. ..+.. .......+.++ ||+.+|+..+ ....|.++|+.++ +. .....+.....+++.|+.++++
T Consensus 255 gt~~~~~~lv~~~~~~~~~~~~~~S-pDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l 333 (751)
T 2xe4_A 255 GKLQSEDVCLYEEHNPLFSAFMYKA-ADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHL 333 (751)
T ss_dssp TSCGGGCEEEEECCCTTCEEEEEEC-TTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEE
T ss_pred CCCchhcEEEEecCCCceEEEEEEC-CCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEE
Confidence 887532 22321 12334567787 7888888765 4457888999886 34 4444555666777777777777
Q ss_pred EEEEc-C--CeEEE--EeCC
Q 016446 243 FLTFR-N--RTVAV--WNFR 257 (389)
Q Consensus 243 laS~s-D--~tIkl--Wd~~ 257 (389)
++... | +.-+| +|+.
T Consensus 334 ~~~t~~~~a~~~~L~~~d~~ 353 (751)
T 2xe4_A 334 VILTNEGGAVNHKLLIAPRG 353 (751)
T ss_dssp EEEECTTTCTTCEEEEEETT
T ss_pred EEEeCCCCCCCcEEEEEcCC
Confidence 66665 5 34444 5555
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.60 E-value=2.9e-05 Score=78.21 Aligned_cols=254 Identities=9% Similarity=0.077 Sum_probs=148.2
Q ss_pred ccCceeEEEecC--CCeEEEEecCCCeEEEEeCCCCeEEEEec-CCcEEEEEEc-CCceEEEEecCCC--CeeEEEEEcC
Q 016446 100 LKWPGFVEFDDV--NGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRSSS--HVPLKILSIE 173 (389)
Q Consensus 100 ~~~~~~v~Fs~p--dG~~Las~s~D~tiklWdl~~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~s~--d~tiklWd~~ 173 (389)
+..|..|+|+ | +|.+.++-. .+.|+.+|+++++...... ...-..|+|+ +|++|.++...+. ...+...+ .
T Consensus 136 ~~~P~~lavd-p~~~g~Lyv~d~-~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~ 212 (430)
T 3tc9_A 136 FGGAVWLSFD-PKNHNHLYLVGE-QHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-R 212 (430)
T ss_dssp CSCCCEEEEE-TTEEEEEEEEEB-TEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-G
T ss_pred CCCCCEEEEC-CCCCCeEEEEeC-CCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-C
Confidence 5678899998 6 355555433 3899999997777544444 4578899999 6776666654321 12333333 4
Q ss_pred CCeEE--EEEeecCCceeEEEEEecCCCeEEEE-eCCCcEEEEECCCCeEEEEc-ccCCCceEEEEEcCCCc-EEEEEc-
Q 016446 174 DGTVL--KVFYHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVS-RTEFMTPSAFIFLYENQ-LFLTFR- 247 (389)
Q Consensus 174 tG~~l--~tl~~~~~~~~~v~f~~~~~~~l~~~-s~D~tIklWd~~tg~~~~~l-~gh~~~v~sv~fspdg~-~laS~s- 247 (389)
.|... ..+.. ..+...+++. |+++.|..+ ..++.|..+|..+++..... .+.....+.++|+|+|+ ++++-.
T Consensus 213 ~g~~~~~~~l~~-~~~p~giavd-p~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 213 ESGFKVITELTK-GQNCNGAETH-PINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp GGTSCSEEEEEE-CSSCCCEEEC-TTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred CCceeeeeeecc-CCCceEEEEe-CCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC
Confidence 44333 34432 3455778876 545555555 47899999999888763332 22235688999999999 566666
Q ss_pred CCeEEEEeCCC---cE--EEEeccCc---CCcC-------CCCee-EEEEC--------CCCCEEEEEecCCCcccccCC
Q 016446 248 NRTVAVWNFRG---EL--VTSFEDHL---LWHP-------DCNTN-NIYIT--------SDQDLIISYCKAEPEDQWMEG 303 (389)
Q Consensus 248 D~tIklWd~~G---~~--l~tl~gh~---~~~~-------~~~v~-sv~fS--------pdG~~laS~s~D~~~~~~~~s 303 (389)
.+.|..++.+| ++ +.++.+.. .... ...-. .+++. ++|.+.++-..
T Consensus 291 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~---------- 360 (430)
T 3tc9_A 291 QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRE---------- 360 (430)
T ss_dssp TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGG----------
T ss_pred CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECC----------
Confidence 88999988764 22 33444321 1000 00012 45553 55777776433
Q ss_pred CCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECC-CCCEEEEecCCC
Q 016446 304 SAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDE-ERNEIYTGNRHG 382 (389)
Q Consensus 304 ~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSp-dg~~LaSgs~D~ 382 (389)
.+.|+.+| .+|+. .++-|... .+.....+|.. .....+..-+.|+++| +|.++++-....
T Consensus 361 -n~~I~~i~-~~G~v-~~~~g~g~--~~~~G~~dG~~--------------~~~~~~~~P~giavd~~~g~lyVaD~~n~ 421 (430)
T 3tc9_A 361 -NHCIRILT-PQGRV-TTFAGRGS--NGTSGYNDGDL--------------RQEARFNHPEGIVYDEERECFFIGDRENR 421 (430)
T ss_dssp -GTEEEEEC-TTSEE-EEEEECCT--TSSSSCBCEET--------------TTTCBCSSEEEEEEETTTTEEEEEEGGGT
T ss_pred -CcEEEEEC-CCCcE-EEEEeCCC--CCCCcccCCCc--------------hhhcEeCCCcEEEEECCCCEEEEEECCCC
Confidence 37899999 66854 44443210 00000000000 0011134678999999 577777766677
Q ss_pred cEEEc
Q 016446 383 LVHVW 387 (389)
Q Consensus 383 tIrlW 387 (389)
.||..
T Consensus 422 rIr~i 426 (430)
T 3tc9_A 422 RIRKI 426 (430)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 77754
No 270
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.54 E-value=5.1e-05 Score=76.56 Aligned_cols=255 Identities=11% Similarity=0.112 Sum_probs=149.7
Q ss_pred cccCceeEEEecCC---CeEEEEecCCCeEEEEeCCCCeEEEEec-CCcEEEEEEc-CCceEEEEecCCC-C-eeEEEEE
Q 016446 99 SLKWPGFVEFDDVN---GKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRSSS-H-VPLKILS 171 (389)
Q Consensus 99 ~~~~~~~v~Fs~pd---G~~Las~s~D~tiklWdl~~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~s~-d-~tiklWd 171 (389)
.+..|..|+|+ |+ |.+.++-.. +.|+.+|+++++...... ......|+|+ +|. |..+...+. + ..+...+
T Consensus 137 ~~~~P~gvavd-~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 137 AFDNIWRMMFD-PNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp CCSCCCEEEEC-TTTTTCEEEEECBT-SCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEEC
T ss_pred ccCCCceEEEc-cccCCCEEEEEeCC-CCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEE
Confidence 45678899998 64 777666544 899999998888655444 3568999999 566 555543221 1 1122223
Q ss_pred cCCCeE-EEEEeecCCceeEEEEEecCCCeEEEE-eCCCcEEEEECCCCeEEEEc-c-cCCCceEEEEEcCCCc-EEEEE
Q 016446 172 IEDGTV-LKVFYHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVS-R-TEFMTPSAFIFLYENQ-LFLTF 246 (389)
Q Consensus 172 ~~tG~~-l~tl~~~~~~~~~v~f~~~~~~~l~~~-s~D~tIklWd~~tg~~~~~l-~-gh~~~v~sv~fspdg~-~laS~ 246 (389)
...+.. ...+. ....-..+++. +.++.|..+ ..++.|+.+|..+|+....+ . +.......++|+|+|+ +.++-
T Consensus 214 ~~~~~~~~~~~~-~~~~P~giavd-~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 214 RASGFTERLSLC-NARGAKTCAVH-PQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp GGGTTCCEEEEE-ECSSBCCCEEC-TTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEE
T ss_pred CCCCeecccccc-ccCCCCEEEEe-CCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEe
Confidence 222211 01222 12344567775 434555555 47889999999988773332 1 2223445799999998 66666
Q ss_pred c-CCeEEEEeCC---CcE--EEEeccCc---CCc-------CCCCeeEEEE---------CCCCCEEEEEecCCCccccc
Q 016446 247 R-NRTVAVWNFR---GEL--VTSFEDHL---LWH-------PDCNTNNIYI---------TSDQDLIISYCKAEPEDQWM 301 (389)
Q Consensus 247 s-D~tIklWd~~---G~~--l~tl~gh~---~~~-------~~~~v~sv~f---------SpdG~~laS~s~D~~~~~~~ 301 (389)
. .+.|...+.+ +++ ..++.|.. ... ....-..++| .++|.+.++-+.
T Consensus 292 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~-------- 363 (433)
T 4hw6_A 292 NGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRD-------- 363 (433)
T ss_dssp TTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETT--------
T ss_pred CCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECC--------
Confidence 6 8899998875 332 23444431 000 0001257999 888988887432
Q ss_pred CCCCCeEEEEeCCCCeEEEEecCCCCC-CCcccccCCCCCCCccccccccceecccccccCCEEEEEEC-CCCCEEEEec
Q 016446 302 EGSAGSINVSSILTGKCLAKINATNCS-PKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYD-EERNEIYTGN 379 (389)
Q Consensus 302 ~s~D~tIklWd~~tg~~l~tl~gH~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafS-pdg~~LaSgs 379 (389)
.+.|+.++ .+|+ +.++-|.... ..+ ..+|. +- ....+..-+.|+++ ++|.++++=.
T Consensus 364 ---n~~I~~~~-~~G~-v~t~~G~g~~~~~G---~~dG~------~~--------~~~~~~~P~giavd~~~g~lyVaD~ 421 (433)
T 4hw6_A 364 ---SHTVRVLT-PEGR-VTTYAGRGNSREWG---YVDGE------LR--------SQALFNHPTSIAYDMKRKCFYIGDC 421 (433)
T ss_dssp ---TTEEEEEC-TTSE-EEEEECCCTTCSSC---CBCEE------TT--------TTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred ---CCEEEEEC-CCCC-EEEEEeCCCCCccc---cCCCc------cc--------cccEeCCCcEEEEECCCCEEEEEeC
Confidence 37899999 5785 4455543200 000 00000 00 00113567899999 7888777777
Q ss_pred CCCcEEEcc
Q 016446 380 RHGLVHVWS 388 (389)
Q Consensus 380 ~D~tIrlW~ 388 (389)
..+.||..+
T Consensus 422 ~n~rIr~i~ 430 (433)
T 4hw6_A 422 DNHRVRKIA 430 (433)
T ss_dssp GGTEEEEEE
T ss_pred CCCEEEEEe
Confidence 777887643
No 271
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.51 E-value=0.00012 Score=72.49 Aligned_cols=207 Identities=13% Similarity=0.144 Sum_probs=136.8
Q ss_pred cccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec-C-CcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCC
Q 016446 99 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-D-KHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDG 175 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~-~-~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG 175 (389)
.+..+..++|++.++++..+-...+.|+.+++..+.....+. + .....+++. .++.|..+. ...+.|.+.++..
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d--~~~~~I~~~~~dg- 190 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTD--SGTSRIEVANLDG- 190 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEE--TTTTEEEECBTTS-
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEc--CCCCeEEEEeCCC-
Confidence 455678899985577888888888999999986655433333 2 355788998 466666653 3346888888764
Q ss_pred eEEEEE-eecCCceeEEEEEecCCCeEEEEe-CC-CcEEEEECCCCeEEEEcccCCCceEEEEEcCC-CcEEEEEc-CCe
Q 016446 176 TVLKVF-YHLLHRNKKVDFIEQFNEKLLVKQ-EN-ENLQILDVRNAELMEVSRTEFMTPSAFIFLYE-NQLFLTFR-NRT 250 (389)
Q Consensus 176 ~~l~tl-~~~~~~~~~v~f~~~~~~~l~~~s-~D-~tIklWd~~tg~~~~~l~gh~~~v~sv~fspd-g~~laS~s-D~t 250 (389)
....++ ......-..+++. |.++.|..+. .+ +.|...++...............+..++|+|+ +++..+-+ .+.
T Consensus 191 ~~~~~l~~~~l~~P~giavd-p~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~ 269 (386)
T 3v65_B 191 AHRKVLLWQSLEKPRAIALH-PMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV 269 (386)
T ss_dssp CSCEEEECSSCSCEEEEEEE-TTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTE
T ss_pred CceEEeecCCCCCCcEEEEE-cCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCE
Confidence 433333 3333455788887 5567666654 44 78999998654444444455667899999975 55555656 889
Q ss_pred EEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCC
Q 016446 251 VAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 325 (389)
Q Consensus 251 IklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH 325 (389)
|...|++|...+++-.....+ -..+++ ..+.+.++-. ..+.|...|..+|+.++++...
T Consensus 270 I~~~d~dG~~~~~~~~~~~~~----P~giav-~~~~ly~td~-----------~~~~V~~~~~~~G~~~~~i~~~ 328 (386)
T 3v65_B 270 IERANLDGSHRKAVISQGLPH----PFAITV-FEDSLYWTDW-----------HTKSINSANKFTGKNQEIIRNK 328 (386)
T ss_dssp EEEECTTSCSCEEEECSSCSS----EEEEEE-ETTEEEEEET-----------TTTEEEEEETTTCCSCEEEECS
T ss_pred EEEEeCCCCeeEEEEECCCCC----ceEEEE-ECCEEEEeeC-----------CCCeEEEEECCCCcceEEEccC
Confidence 999999875444443212222 368888 4455555532 2478999997789888888654
No 272
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.49 E-value=0.00025 Score=71.29 Aligned_cols=230 Identities=13% Similarity=0.114 Sum_probs=141.5
Q ss_pred ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcc
Q 016446 13 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 92 (389)
Q Consensus 13 ~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~ 92 (389)
+..|.++...+.|+.++.+ +..+.++... ...-+.|+|+|+|++|..+...++ . +...-++..+.|.+....
T Consensus 149 ~g~Lyv~d~~~~I~~id~~-~~~v~~~~~~-~~~P~~ia~d~~G~~lyvad~~~~-~-----~~~~v~~~~~~g~~~~~~ 220 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFE-KEYVSTVYSG-LSKVRTICWTHEADSMIITNDQNN-N-----DRPNNYILTRESGFKVIT 220 (430)
T ss_dssp EEEEEEEEBTEEEEEEETT-TTEEEEEECC-CSCEEEEEECTTSSEEEEEECCSC-T-----TSEEEEEEEGGGTSCSEE
T ss_pred CCeEEEEeCCCcEEEEECC-CCEEEEEecC-CCCcceEEEeCCCCEEEEEeCCCC-c-----ccceEEEEeCCCceeeee
Confidence 3556666666889999997 4445555543 367899999999996666432111 1 112223344666652111
Q ss_pred eeEeeecccCceeEEEecC-CCeEEEEecCCCeEEEEeCCCCeEE--EEecC-CcEEEEEEc-CCceEEEEecCCCCeeE
Q 016446 93 ALFESESLKWPGFVEFDDV-NGKVLTYSAQDSIYKVFDLKNYTML--YSISD-KHVQEIKIS-PGIMLLIFNRSSSHVPL 167 (389)
Q Consensus 93 ~l~~~~~~~~~~~v~Fs~p-dG~~Las~s~D~tiklWdl~~g~~l--~tl~~-~~V~~vafS-~g~~la~~~~~s~d~ti 167 (389)
.+ ..+.+|..++++ | +|.++++-..++.|..++..+++.. ..+.. .+-..++|+ +|.+|..+.. ..+.|
T Consensus 221 ~l---~~~~~p~giavd-p~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~--~~~~I 294 (430)
T 3tc9_A 221 EL---TKGQNCNGAETH-PINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV--NQHYI 294 (430)
T ss_dssp EE---EECSSCCCEEEC-TTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET--TTTEE
T ss_pred ee---ccCCCceEEEEe-CCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC--CCCEE
Confidence 22 246688899998 7 8998888878899999999777642 22322 456789999 5776766643 34688
Q ss_pred EEEEcC--CCeE--EEEEeecCC---------------cee-EEEEEec------CCCeEEEE-eCCCcEEEEECCCCeE
Q 016446 168 KILSIE--DGTV--LKVFYHLLH---------------RNK-KVDFIEQ------FNEKLLVK-QENENLQILDVRNAEL 220 (389)
Q Consensus 168 klWd~~--tG~~--l~tl~~~~~---------------~~~-~v~f~~~------~~~~l~~~-s~D~tIklWd~~tg~~ 220 (389)
..++.. +|+. +.++.+..+ .-. .++.... ..+.|..+ ...+.|+.+| .+|+.
T Consensus 295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v 373 (430)
T 3tc9_A 295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRV 373 (430)
T ss_dssp EEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEE
T ss_pred EEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcE
Confidence 887754 3443 334433200 001 2222210 12344444 4778999999 46765
Q ss_pred EEEcc-------c----------CCCceEEEEEcC-CCcEEEEEc-CCeEEEEeCC
Q 016446 221 MEVSR-------T----------EFMTPSAFIFLY-ENQLFLTFR-NRTVAVWNFR 257 (389)
Q Consensus 221 ~~~l~-------g----------h~~~v~sv~fsp-dg~~laS~s-D~tIklWd~~ 257 (389)
..... | ....++.|++.| +|.++++-. .+.|+..+++
T Consensus 374 ~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 374 TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 44321 1 133799999999 688888877 7788876653
No 273
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.46 E-value=0.00019 Score=69.99 Aligned_cols=207 Identities=13% Similarity=0.134 Sum_probs=135.9
Q ss_pred cccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec-C-CcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCC
Q 016446 99 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-D-KHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDG 175 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~-~-~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG 175 (389)
.+..+..++|++.++.+..+-...+.|+.+++..+.....+. + .....+|+. .++.|..+. ...+.|.+.++..
T Consensus 71 ~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d--~~~~~I~~~~~dG- 147 (349)
T 3v64_C 71 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTD--SGTSRIEVANLDG- 147 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEE--TTTTEEEEEETTS-
T ss_pred CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEc--CCCCeEEEEcCCC-
Confidence 445677899986677888888888999999986655333333 2 456789998 466666653 3346899999764
Q ss_pred eEEEEEe-ecCCceeEEEEEecCCCeEEEEe-CC-CcEEEEECCCCeEEEEcccCCCceEEEEEcCC-CcEEEEEc-CCe
Q 016446 176 TVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQ-EN-ENLQILDVRNAELMEVSRTEFMTPSAFIFLYE-NQLFLTFR-NRT 250 (389)
Q Consensus 176 ~~l~tl~-~~~~~~~~v~f~~~~~~~l~~~s-~D-~tIklWd~~tg~~~~~l~gh~~~v~sv~fspd-g~~laS~s-D~t 250 (389)
+...++. .....-..+++. |.++.|..+. .+ +.|...++............-..+..++|+|+ +++..+-+ .+.
T Consensus 148 ~~~~~l~~~~l~~P~~iavd-p~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~ 226 (349)
T 3v64_C 148 AHRKVLLWQSLEKPRAIALH-PMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV 226 (349)
T ss_dssp CSCEEEECTTCSCEEEEEEE-TTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CceEEEEeCCCCCcceEEEe-cCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCE
Confidence 4344433 333455788887 5566666654 44 88999998644333333445567899999975 55555656 889
Q ss_pred EEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCC
Q 016446 251 VAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 325 (389)
Q Consensus 251 IklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH 325 (389)
|...|++|...+++-.....+ -..+++ .++.+.++- . ..+.|...|-.+|+.+.++...
T Consensus 227 I~~~~~dG~~~~~~~~~~~~~----P~giav-~~~~ly~td-~----------~~~~V~~~~~~~G~~~~~i~~~ 285 (349)
T 3v64_C 227 IERANLDGSHRKAVISQGLPH----PFAITV-FEDSLYWTD-W----------HTKSINSANKFTGKNQEIIRNK 285 (349)
T ss_dssp EEEEETTSCSCEEEECSSCSS----EEEEEE-ETTEEEEEE-T----------TTTEEEEEETTTCCSCEEEECS
T ss_pred EEEEeCCCCceEEEEeCCCCC----ceEEEE-ECCEEEEec-C----------CCCeEEEEEccCCCccEEeccC
Confidence 999999876544433211222 367888 345555543 2 2478888887789888887643
No 274
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.46 E-value=0.00029 Score=68.64 Aligned_cols=182 Identities=10% Similarity=0.046 Sum_probs=120.7
Q ss_pred CCeEEEEeCCCCeEEEEec-CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCC
Q 016446 122 DSIYKVFDLKNYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNE 199 (389)
Q Consensus 122 D~tiklWdl~~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~ 199 (389)
...|+.-++...+....+. .....+++|. .++.|..+. ...+.|+.+++.++.....+.........+++. +.++
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D--~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd-~~~g 128 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSD--VTLDRILRANLNGSNVEEVVSTGLESPGGLAVD-WVHD 128 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEECSSCSCCCEEEEE-TTTT
T ss_pred ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEe--ccCCceEEEecCCCCceEEEeCCCCCccEEEEe-cCCC
Confidence 4567778875555444444 3568899999 567776663 334789999987765444443223444678876 4466
Q ss_pred eEEEE-eCCCcEEEEECCCCeEEEEcccCCCceEEEEEcC-CCcEEEEEc-C-CeEEEEeCCCcEEEEeccCcCCcCCCC
Q 016446 200 KLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFR-N-RTVAVWNFRGELVTSFEDHLLWHPDCN 275 (389)
Q Consensus 200 ~l~~~-s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fsp-dg~~laS~s-D-~tIklWd~~G~~l~tl~gh~~~~~~~~ 275 (389)
.|..+ ...+.|.+.++........+......+..+++.| +|.++.+-. . +.|...+++|....++-......
T Consensus 129 ~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~---- 204 (349)
T 3v64_C 129 KLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFW---- 204 (349)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSC----
T ss_pred eEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCC----
Confidence 66555 5778999999975554444455556889999998 566666766 6 88999999887666653221111
Q ss_pred eeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEE
Q 016446 276 TNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAK 321 (389)
Q Consensus 276 v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~t 321 (389)
-+.++|+|+++.|--+-. ..+.|...|+. |....+
T Consensus 205 PnGla~d~~~~~lY~aD~----------~~~~I~~~~~d-G~~~~~ 239 (349)
T 3v64_C 205 PNGLTIDYAGRRMYWVDA----------KHHVIERANLD-GSHRKA 239 (349)
T ss_dssp EEEEEEETTTTEEEEEET----------TTTEEEEEETT-SCSCEE
T ss_pred cceEEEeCCCCEEEEEEC----------CCCEEEEEeCC-CCceEE
Confidence 379999998777765533 24789999965 544333
No 275
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.45 E-value=0.00014 Score=71.99 Aligned_cols=190 Identities=11% Similarity=0.068 Sum_probs=124.7
Q ss_pred CCCeEEEEecCCCeEEEEeCCCCeEEEEec-CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCce
Q 016446 111 VNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRN 188 (389)
Q Consensus 111 pdG~~Las~s~D~tiklWdl~~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~ 188 (389)
+++-+|.+ ....|+..++..++....+. .....+++|. .++.|..+. ...+.|+.+++.++.....+.......
T Consensus 86 ~~~~l~~~--~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D--~~~~~I~r~~~~g~~~~~~~~~~~~~p 161 (386)
T 3v65_B 86 PEPVLLFA--NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSD--VTLDRILRANLNGSNVEEVVSTGLESP 161 (386)
T ss_dssp SCCEEEEE--CBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCCEEEEECSSCSCC
T ss_pred ccceeEee--cCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEe--CCCCcEEEEecCCCCcEEEEeCCCCCc
Confidence 44444433 34678888987666544444 3578899999 577776664 334789999987765444444223344
Q ss_pred eEEEEEecCCCeEEEE-eCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCC-CcEEEEEc-C-CeEEEEeCCCcEEEEe
Q 016446 189 KKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLYE-NQLFLTFR-N-RTVAVWNFRGELVTSF 264 (389)
Q Consensus 189 ~~v~f~~~~~~~l~~~-s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspd-g~~laS~s-D-~tIklWd~~G~~l~tl 264 (389)
..+++. +.++.|... ...+.|.+.++........+......+..+++.|+ |.++.+-. . +.|...+++|.....+
T Consensus 162 ~glavd-~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 240 (386)
T 3v65_B 162 GGLAVD-WVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII 240 (386)
T ss_dssp CCEEEE-TTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred cEEEEE-eCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEE
Confidence 678876 445666554 57789999998765544445555578999999985 55666665 5 7898889988765555
Q ss_pred cc-CcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEE
Q 016446 265 ED-HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAK 321 (389)
Q Consensus 265 ~g-h~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~t 321 (389)
-. ...+ -+.|+|+|+++.|--+-. ..+.|...|+. |....+
T Consensus 241 ~~~~~~~-----PnGlavd~~~~~lY~aD~----------~~~~I~~~d~d-G~~~~~ 282 (386)
T 3v65_B 241 ADTHLFW-----PNGLTIDYAGRRMYWVDA----------KHHVIERANLD-GSHRKA 282 (386)
T ss_dssp ECSSCSC-----EEEEEEEGGGTEEEEEET----------TTTEEEEECTT-SCSCEE
T ss_pred EECCCCC-----eeeEEEeCCCCEEEEEEC----------CCCEEEEEeCC-CCeeEE
Confidence 32 2222 379999998777765533 34789999965 443333
No 276
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.45 E-value=0.00034 Score=67.00 Aligned_cols=183 Identities=9% Similarity=0.015 Sum_probs=120.5
Q ss_pred CCeEEEEeCCCCeEEEEec-CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCC---CeEEEE-EeecCCceeEEEEEe
Q 016446 122 DSIYKVFDLKNYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIED---GTVLKV-FYHLLHRNKKVDFIE 195 (389)
Q Consensus 122 D~tiklWdl~~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~t---G~~l~t-l~~~~~~~~~v~f~~ 195 (389)
...|+.-|+.+++....+. .....+++|. .++.|..+. ...+.|+..++.+ |....+ +.........+++.
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D--~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd- 85 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSD--LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD- 85 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEE--TTTTEEEEEEC--------CEEEECSSCSCCCEEEEE-
T ss_pred CCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEE--CCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEe-
Confidence 3578888998776555555 3678899999 577777664 3357899999875 233333 32222445778876
Q ss_pred cCCCeEEEE-eCCCcEEEEECCCCeEEEEcccCCCceEEEEEcC-CCcEEEEEc-C-CeEEEEeCCCcEEEEeccCcCCc
Q 016446 196 QFNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFR-N-RTVAVWNFRGELVTSFEDHLLWH 271 (389)
Q Consensus 196 ~~~~~l~~~-s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fsp-dg~~laS~s-D-~tIklWd~~G~~l~tl~gh~~~~ 271 (389)
+.++.|..+ ..+++|.+.|+........+......+..+++.| +|.++.+.. . +.|...+++|+..+.+......
T Consensus 86 ~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~- 164 (316)
T 1ijq_A 86 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ- 164 (316)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCS-
T ss_pred ecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCC-
Confidence 445666555 5789999999975554444444556889999998 566666665 4 7888889998876665322211
Q ss_pred CCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEe
Q 016446 272 PDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 322 (389)
Q Consensus 272 ~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl 322 (389)
.-+.++|+|+++.|--+.. ..+.|...|+. |...+++
T Consensus 165 ---~P~gla~d~~~~~lY~~D~----------~~~~I~~~d~d-g~~~~~~ 201 (316)
T 1ijq_A 165 ---WPNGITLDLLSGRLYWVDS----------KLHSISSIDVN-GGNRKTI 201 (316)
T ss_dssp ---CEEEEEEETTTTEEEEEET----------TTTEEEEEETT-SCSCEEE
T ss_pred ---CceEEEEeccCCEEEEEEC----------CCCeEEEEecC-CCceEEE
Confidence 1479999998887765533 24799999975 5444444
No 277
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.43 E-value=0.00038 Score=66.93 Aligned_cols=262 Identities=12% Similarity=0.064 Sum_probs=146.1
Q ss_pred ccEEEEEee--ccEEEEEecCceEEEEecccceeeeeeec---CCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeee
Q 016446 4 TKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNV---SPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRST 78 (389)
Q Consensus 4 ~~v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l~tl~~---~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~ 78 (389)
..+..|.|. +..+| ..+.|.| +...+-|+.-..+.. .....+++|+|.| +..++. . .+ . .
T Consensus 36 ~~~~~v~~~~~~~~~~-~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~-g----~~-g-----~- 100 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWL-VGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIV-G----EP-P-----I- 100 (327)
T ss_dssp SCEEEEEESSSSCEEE-EETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEE-E----ET-T-----E-
T ss_pred CcEEEEEECCCCcEEE-EcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEE-E----CC-C-----e-
Confidence 468899986 55566 5567776 444444544333322 1234789999986 443333 2 11 1 1
Q ss_pred eEeEecc-CCCCCcceeEeee-----cccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeE---EEEecCCcEEEEEE
Q 016446 79 KIEYIRR-GKPDSGFALFESE-----SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM---LYSISDKHVQEIKI 149 (389)
Q Consensus 79 ~l~~i~~-g~~~~~~~l~~~~-----~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~---l~tl~~~~V~~vaf 149 (389)
|+--.. |+. |+.. ..+.+..+++. ++++.++.+...+-+|-+| .|+- +.......+.+++|
T Consensus 101 -i~~S~DgG~t------W~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~~ 170 (327)
T 2xbg_A 101 -MLHTTDGGQS------WSQIPLDPKLPGSPRLIKAL-GNGSAEMITNVGAIYRTKD--SGKNWQALVQEAIGVMRNLNR 170 (327)
T ss_dssp -EEEESSTTSS------CEECCCCTTCSSCEEEEEEE-ETTEEEEEETTCCEEEESS--TTSSEEEEECSCCCCEEEEEE
T ss_pred -EEEECCCCCC------ceECccccCCCCCeEEEEEE-CCCCEEEEeCCccEEEEcC--CCCCCEEeecCCCcceEEEEE
Confidence 111122 321 2210 11234567886 5788888765433345554 3542 22112357899999
Q ss_pred c-CCceEEEEecCCCCeeEEEEEc--CCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcc-
Q 016446 150 S-PGIMLLIFNRSSSHVPLKILSI--EDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR- 225 (389)
Q Consensus 150 S-~g~~la~~~~~s~d~tiklWd~--~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~- 225 (389)
. ++..++.+..+ ...+-+|- .+-+.+.. .....+..+++. ++ +.+.+.+.++.+.+++...|+.-+.+.
T Consensus 171 ~~~~~~~~~g~~G---~~~~S~d~gG~tW~~~~~--~~~~~~~~~~~~-~~-g~~~~~~~~G~~~~s~~D~G~tW~~~~~ 243 (327)
T 2xbg_A 171 SPSGEYVAVSSRG---SFYSTWEPGQTAWEPHNR--TTSRRLHNMGFT-PD-GRLWMIVNGGKIAFSDPDNSENWGELLS 243 (327)
T ss_dssp CTTSCEEEEETTS---SEEEEECTTCSSCEEEEC--CSSSCEEEEEEC-TT-SCEEEEETTTEEEEEETTEEEEECCCBC
T ss_pred cCCCcEEEEECCC---cEEEEeCCCCCceeECCC--CCCCccceeEEC-CC-CCEEEEeCCceEEEecCCCCCeeEeccC
Confidence 9 56666654222 34444552 22233321 223456777775 43 456667778888887543355433322
Q ss_pred c---CCCceEEEEEcCCCcEEEEEcCCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCccccc
Q 016446 226 T---EFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWM 301 (389)
Q Consensus 226 g---h~~~v~sv~fspdg~~laS~sD~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~ 301 (389)
+ +...+.+++|.|++++++.+.+++| ++..+ |+--..+...... + ..+.+|+|.+++++++.|
T Consensus 244 ~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~-~-~~~~~v~~~~~~~~~~~G---------- 310 (327)
T 2xbg_A 244 PLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKV-P-SNFYKILFFSPDQGFILG---------- 310 (327)
T ss_dssp TTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTS-S-SCCCEEEEEETTEEEEEC----------
T ss_pred CcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCC-C-CCeEEEEEECCCceEEEc----------
Confidence 1 3346899999999999998888888 56666 7655555422110 0 125789998888777664
Q ss_pred CCCCCeEEEEe
Q 016446 302 EGSAGSINVSS 312 (389)
Q Consensus 302 ~s~D~tIklWd 312 (389)
++|+|.-++
T Consensus 311 --~~G~i~~~~ 319 (327)
T 2xbg_A 311 --QKGILLRYV 319 (327)
T ss_dssp --STTEEEEEC
T ss_pred --CCceEEEEc
Confidence 348776554
No 278
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.42 E-value=0.00059 Score=65.61 Aligned_cols=268 Identities=12% Similarity=0.085 Sum_probs=148.7
Q ss_pred cceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeee------cccCceeEEEecCCCeEEE
Q 016446 44 DEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESE------SLKWPGFVEFDDVNGKVLT 117 (389)
Q Consensus 44 ~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~------~~~~~~~v~Fs~pdG~~La 117 (389)
...+++|+|.+++..+|. +... .+ ++...-|+. |+.. ...++.+|+|+ | ++.++
T Consensus 35 ~~~~~~v~~~~~~~~~~~----G~~g-------~i-~~s~DgG~t------W~~~~~~~~~~~~~~~~i~~~-~-~~~~~ 94 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV----GVNA-------TL-METRDGGQT------WEPRTLVLDHSDYRFNSVSFQ-G-NEGWI 94 (327)
T ss_dssp SSCEEEEEESSSSCEEEE----ETTT-------EE-EEESSTTSS------CEECCCCCSCCCCEEEEEEEE-T-TEEEE
T ss_pred CCcEEEEEECCCCcEEEE----cCCC-------eE-EEeCCCCCC------CeECCCCCCCCCccEEEEEec-C-CeEEE
Confidence 367999999988887764 3222 11 111112321 1100 11234578997 5 56666
Q ss_pred EecCCCeEEEEeCCCCeEEEEec-----CCcEEEEEEc-CCceEEEEecCCCCeeE-EEEEcCCCeEEEEEe-ecCCcee
Q 016446 118 YSAQDSIYKVFDLKNYTMLYSIS-----DKHVQEIKIS-PGIMLLIFNRSSSHVPL-KILSIEDGTVLKVFY-HLLHRNK 189 (389)
Q Consensus 118 s~s~D~tiklWdl~~g~~l~tl~-----~~~V~~vafS-~g~~la~~~~~s~d~ti-klWd~~tG~~l~tl~-~~~~~~~ 189 (389)
. +.++.|.. .-..|+--.... ...+..|++. |+..+|++. . +.| |-+| .|+.-..+. .+...+.
T Consensus 95 ~-g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~---g~v~~S~D--gG~tW~~~~~~~~~~~~ 166 (327)
T 2xbg_A 95 V-GEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-V---GAIYRTKD--SGKNWQALVQEAIGVMR 166 (327)
T ss_dssp E-EETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-T---CCEEEESS--TTSSEEEEECSCCCCEE
T ss_pred E-ECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC-C---ccEEEEcC--CCCCCEEeecCCCcceE
Confidence 4 45565543 222344211111 1357888887 677666542 2 333 3333 354333332 3345678
Q ss_pred EEEEEecCCCeEEEEeCCCcEEEEEC--CCCeEEEEcccCCCceEEEEEcCCCcEEEEEcCCeEEEEeCC-CcEEEEecc
Q 016446 190 KVDFIEQFNEKLLVKQENENLQILDV--RNAELMEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFED 266 (389)
Q Consensus 190 ~v~f~~~~~~~l~~~s~D~tIklWd~--~tg~~~~~l~gh~~~v~sv~fspdg~~laS~sD~tIklWd~~-G~~l~tl~g 266 (389)
.++|. +++..++.+......+-+|- ++=+.+. .+....+..+++.|++++++.+.+|.+.+++.+ |+-...+..
T Consensus 167 ~~~~~-~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~ 243 (327)
T 2xbg_A 167 NLNRS-PSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLS 243 (327)
T ss_dssp EEEEC-TTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBC
T ss_pred EEEEc-CCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccC
Confidence 88886 44544444444444555553 2223332 345568899999999999887779998888655 654433321
Q ss_pred CcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCcccc
Q 016446 267 HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKL 346 (389)
Q Consensus 267 h~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~ 346 (389)
..... ...+.+|+|.|+++++|.+. +++| ++....|+--..+.....
T Consensus 244 ~~~~~-~~~~~~v~~~~~~~~~~~g~------------~g~i-~~S~DgG~tW~~~~~~~~------------------- 290 (327)
T 2xbg_A 244 PLRRN-SVGFLDLAYRTPNEVWLAGG------------AGAL-LCSQDGGQTWQQDVDVKK------------------- 290 (327)
T ss_dssp TTSSC-CSCEEEEEESSSSCEEEEES------------TTCE-EEESSTTSSCEECGGGTT-------------------
T ss_pred CcccC-CcceEEEEecCCCEEEEEeC------------CCeE-EEeCCCCcccEEcCccCC-------------------
Confidence 10000 01268999999999999864 3666 454455655554442210
Q ss_pred ccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEEcc
Q 016446 347 NKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 347 ~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrlW~ 388 (389)
. ...+++|+|.++++ ++.++.+|+|.-++
T Consensus 291 ---------~---~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 291 ---------V---PSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp ---------S---SSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred ---------C---CCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 0 03577899986665 55666788876543
No 279
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.38 E-value=0.00097 Score=63.74 Aligned_cols=206 Identities=8% Similarity=0.021 Sum_probs=133.4
Q ss_pred cccCceeEEEecCCCeEEEEecCCCeEEEEeCCC---CeE-EEEec-C-CcEEEEEEc-CCceEEEEecCCCCeeEEEEE
Q 016446 99 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN---YTM-LYSIS-D-KHVQEIKIS-PGIMLLIFNRSSSHVPLKILS 171 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~---g~~-l~tl~-~-~~V~~vafS-~g~~la~~~~~s~d~tiklWd 171 (389)
.+..|..++|++.++++..+....+.|...++.+ +.. ...+. + .....+|+. .++.|..+. ...+.|.+.+
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d--~~~~~I~~~~ 105 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD--SVLGTVSVAD 105 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEE--TTTTEEEEEE
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEE--CCCCEEEEEe
Confidence 4456788999844677777878889999999865 232 22233 2 456889998 577776663 3347899999
Q ss_pred cCCCeEEEEE-eecCCceeEEEEEecCCCeEEEEeC-C-CcEEEEECCCCeEEEEc-ccCCCceEEEEEcCCCc-EEEEE
Q 016446 172 IEDGTVLKVF-YHLLHRNKKVDFIEQFNEKLLVKQE-N-ENLQILDVRNAELMEVS-RTEFMTPSAFIFLYENQ-LFLTF 246 (389)
Q Consensus 172 ~~tG~~l~tl-~~~~~~~~~v~f~~~~~~~l~~~s~-D-~tIklWd~~tg~~~~~l-~gh~~~v~sv~fspdg~-~laS~ 246 (389)
+.. +...++ ......-..+++. |.++.|..+.. . +.|...++. |+..+.+ ...-..+..++++|+++ +..+-
T Consensus 106 ~~g-~~~~~~~~~~~~~P~~iavd-p~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D 182 (316)
T 1ijq_A 106 TKG-VKRKTLFRENGSKPRAIVVD-PVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVD 182 (316)
T ss_dssp TTS-SSEEEEEECTTCCEEEEEEE-TTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred CCC-CceEEEEECCCCCcceEEeC-CCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEE
Confidence 764 444444 3233556788887 55676666543 3 788888885 4444443 34456899999998655 44555
Q ss_pred c-CCeEEEEeCCCcEEEEeccC--cCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEec
Q 016446 247 R-NRTVAVWNFRGELVTSFEDH--LLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKIN 323 (389)
Q Consensus 247 s-D~tIklWd~~G~~l~tl~gh--~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~ 323 (389)
+ .+.|...|++|...+++... ...+ -..+++. .+.+.++- . ..+.|...|..+|+.+.++.
T Consensus 183 ~~~~~I~~~d~dg~~~~~~~~~~~~~~~----P~giav~-~~~ly~~d-~----------~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 183 SKLHSISSIDVNGGNRKTILEDEKRLAH----PFSLAVF-EDKVFWTD-I----------INEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp TTTTEEEEEETTSCSCEEEEECTTTTSS----EEEEEEE-TTEEEEEE-T----------TTTEEEEEETTTCCCCEEEE
T ss_pred CCCCeEEEEecCCCceEEEeecCCccCC----cEEEEEE-CCEEEEEE-C----------CCCeEEEEeCCCCcceEEEe
Confidence 6 88999999987655554321 1122 2578884 35555543 2 24799999988898888876
Q ss_pred CC
Q 016446 324 AT 325 (389)
Q Consensus 324 gH 325 (389)
..
T Consensus 247 ~~ 248 (316)
T 1ijq_A 247 EN 248 (316)
T ss_dssp CS
T ss_pred cC
Confidence 44
No 280
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.38 E-value=9.7e-05 Score=76.34 Aligned_cols=260 Identities=11% Similarity=0.099 Sum_probs=152.4
Q ss_pred cccCceeEEEecC--CCeEEEEecCCCeEEEEeCCCCeEEEEecC-----CcEEEEEE-------c-CCceEEEEecCC-
Q 016446 99 SLKWPGFVEFDDV--NGKVLTYSAQDSIYKVFDLKNYTMLYSISD-----KHVQEIKI-------S-PGIMLLIFNRSS- 162 (389)
Q Consensus 99 ~~~~~~~v~Fs~p--dG~~Las~s~D~tiklWdl~~g~~l~tl~~-----~~V~~vaf-------S-~g~~la~~~~~s- 162 (389)
.+..|..++|+ | ++++.++....+.|++-|+++++....+.. ...+.|+| + +|.+|.++...+
T Consensus 137 ~~~~p~~la~d-p~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~ 215 (496)
T 3kya_A 137 GFSDNGRLAFD-PLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDG 215 (496)
T ss_dssp CCCSEEEEEEE-TTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCT
T ss_pred ccCCCCEEEEc-cCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCC
Confidence 34567889998 6 466666665557899999887776544432 25899999 9 677666665443
Q ss_pred ---CCeeEEEEEcCC-CeEE-----EEEeecCCceeEEEEEecCCCeEEEE-eCCCcEEEEECC-------CCeE-----
Q 016446 163 ---SHVPLKILSIED-GTVL-----KVFYHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVR-------NAEL----- 220 (389)
Q Consensus 163 ---~d~tiklWd~~t-G~~l-----~tl~~~~~~~~~v~f~~~~~~~l~~~-s~D~tIklWd~~-------tg~~----- 220 (389)
....|.+.+... |+.. +++.. ..+-..+++. |+++.|... ..++.|..+|++ +|+.
T Consensus 216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavd-p~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~ 293 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIH-PINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIV 293 (496)
T ss_dssp TGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEEC-TTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBG
T ss_pred CcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEc-CCCCeEEEEECCCCEEEEEecccccccccCceeecccc
Confidence 123455665333 2321 23321 1344567775 555666654 588899999998 6664
Q ss_pred ------EEE-c-ccCCCceEEEEEcCCCc-EEEEEc-CCeEEEEeCCCc--EE---EEeccCc---CCc-------CCCC
Q 016446 221 ------MEV-S-RTEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNFRGE--LV---TSFEDHL---LWH-------PDCN 275 (389)
Q Consensus 221 ------~~~-l-~gh~~~v~sv~fspdg~-~laS~s-D~tIklWd~~G~--~l---~tl~gh~---~~~-------~~~~ 275 (389)
++. + .+...+.+.++|+|+|+ +.++-+ .+.|+.++.+|+ .+ .++.|.. +.. ....
T Consensus 294 ~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~ 373 (496)
T 3kya_A 294 KNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNN 373 (496)
T ss_dssp GGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSS
T ss_pred cccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCC
Confidence 222 1 23345678999999999 466666 889999776542 22 4454431 100 0001
Q ss_pred ee-EEEEC-------CCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCC----CCcccccCCCCCCCc
Q 016446 276 TN-NIYIT-------SDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCS----PKVDDELGSSSTGKS 343 (389)
Q Consensus 276 v~-sv~fS-------pdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~----~~~~~~~~~~~~~~~ 343 (389)
-. .++.. ++|.+.++-+. ...||..+ .+|+ +.++-|.... +.......+|+.
T Consensus 374 P~~gv~vd~~~~~~~~~g~lyVaD~~-----------N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~--- 437 (496)
T 3kya_A 374 PCQGVFVKNPDYTGEEEYDFYFVDRL-----------NFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDL--- 437 (496)
T ss_dssp EEEEEEEECTTCCSSCCEEEEEEEGG-----------GTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEET---
T ss_pred CeEEEEEccccccccCCCeEEEEECC-----------CCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCc---
Confidence 13 34554 57777776433 37999999 6784 6677664210 000000000100
Q ss_pred cccccccceecccccccCCEEEEEECCC-CCEEEEecCCCcEEEcc
Q 016446 344 KKLNKSSYIRSTVGEALEDITSLFYDEE-RNEIYTGNRHGLVHVWS 388 (389)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~V~svafSpd-g~~LaSgs~D~tIrlW~ 388 (389)
-. ...+..-+.|+++|+ |.++++=+....||..+
T Consensus 438 ---~~--------~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~ 472 (496)
T 3kya_A 438 ---RE--------VARFRDVSGLVYDDVKEMFYVHDQVGHTIRTIS 472 (496)
T ss_dssp ---TT--------TCCCSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ---hh--------hhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEE
Confidence 00 112356789999997 77777777778888654
No 281
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.33 E-value=0.00019 Score=70.05 Aligned_cols=142 Identities=15% Similarity=0.157 Sum_probs=84.6
Q ss_pred ccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeE--EEEec-----CCcEEEEEEcCC----ceEEEEecCCCC---e
Q 016446 100 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM--LYSIS-----DKHVQEIKISPG----IMLLIFNRSSSH---V 165 (389)
Q Consensus 100 ~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~--l~tl~-----~~~V~~vafS~g----~~la~~~~~s~d---~ 165 (389)
+.+|..++|+ |||+++++- .++.|++++ +|+. +..+. ......|+|+|+ ..|..+.....+ .
T Consensus 30 l~~P~~ia~~-pdG~l~V~e-~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 30 LEVPWALAFL-PDGGMLIAE-RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp CSCEEEEEEC-TTSCEEEEE-TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCCceEEEEc-CCCeEEEEe-CCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 4578899998 899988765 569999998 5652 33332 246899999964 666665433222 5
Q ss_pred eEEEEEcCCCe-----E-EEEEe---ecCCceeEEEEEecCCCeEEEEeC-------------CCcEEEEECCC------
Q 016446 166 PLKILSIEDGT-----V-LKVFY---HLLHRNKKVDFIEQFNEKLLVKQE-------------NENLQILDVRN------ 217 (389)
Q Consensus 166 tiklWd~~tG~-----~-l~tl~---~~~~~~~~v~f~~~~~~~l~~~s~-------------D~tIklWd~~t------ 217 (389)
.|..++...++ . +..++ +..|.-..++|. |++...++.+. .+.|.-.|...
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~-pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~n 184 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFG-PDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGN 184 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEEC-TTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTC
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEEC-CCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCC
Confidence 67777776542 2 22243 112344789997 66644444221 14555555542
Q ss_pred -------CeEEEEcccCCCceEEEEEcC-CCcEEEEEc
Q 016446 218 -------AELMEVSRTEFMTPSAFIFLY-ENQLFLTFR 247 (389)
Q Consensus 218 -------g~~~~~l~gh~~~v~sv~fsp-dg~~laS~s 247 (389)
........||. .++.++|.| +|+++++-.
T Consensus 185 pf~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~ 221 (352)
T 2ism_A 185 PFLGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEH 221 (352)
T ss_dssp TTTTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEE
T ss_pred cccCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEc
Confidence 01111112343 367789999 888888775
No 282
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.31 E-value=0.00054 Score=69.06 Aligned_cols=233 Identities=9% Similarity=0.062 Sum_probs=141.6
Q ss_pred EEEee----ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEe
Q 016446 8 EIVAA----RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYI 83 (389)
Q Consensus 8 ~i~~~----~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i 83 (389)
.|.+. +..|..+...+.|+.++.++|+.. ++... ....+.|+|+|+|+.+++ ...+..+ ...-++-.
T Consensus 143 gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~-~~~~~-~~~P~giavd~dG~lyVa-d~~~~~~------~~gv~~~~ 213 (433)
T 4hw6_A 143 RMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVD-IKTTN-IGQCADVNFTLNGDMVVV-DDQSSDT------NTGIYLFT 213 (433)
T ss_dssp EEEECTTTTTCEEEEECBTSCEEEEETTTTEEE-EECCC-CSCEEEEEECTTCCEEEE-ECCSCTT------SEEEEEEC
T ss_pred eEEEccccCCCEEEEEeCCCCEEEEECCCCEEE-EeecC-CCCccEEEECCCCCEEEE-cCCCCcc------cceEEEEE
Confidence 45555 245555555588999998766655 44433 367899999999994444 2111111 11112222
Q ss_pred ccCCCCCcceeEeeecccCceeEEEecC-CCeEEEEecCCCeEEEEeCCCCeEEEEe-c---CCcEEEEEEc-CCceEEE
Q 016446 84 RRGKPDSGFALFESESLKWPGFVEFDDV-NGKVLTYSAQDSIYKVFDLKNYTMLYSI-S---DKHVQEIKIS-PGIMLLI 157 (389)
Q Consensus 84 ~~g~~~~~~~l~~~~~~~~~~~v~Fs~p-dG~~Las~s~D~tiklWdl~~g~~l~tl-~---~~~V~~vafS-~g~~la~ 157 (389)
+.+..... ... ..+.+|..++++ | +|.+.++-..++.|+.+|..+|+....+ . ...-..++|+ +|.+|..
T Consensus 214 ~~~~~~~~-~~~--~~~~~P~giavd-~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYv 289 (433)
T 4hw6_A 214 RASGFTER-LSL--CNARGAKTCAVH-PQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYI 289 (433)
T ss_dssp GGGTTCCE-EEE--EECSSBCCCEEC-TTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEE
T ss_pred CCCCeecc-ccc--cccCCCCEEEEe-CCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEE
Confidence 34433111 122 245678889998 7 8988888778899999999878763222 2 2233579999 5776766
Q ss_pred EecCCCCeeEEEEEcC--CCeEE--EEEeec---------------CCceeEEEEEe-------cCCCeEEEE-eCCCcE
Q 016446 158 FNRSSSHVPLKILSIE--DGTVL--KVFYHL---------------LHRNKKVDFIE-------QFNEKLLVK-QENENL 210 (389)
Q Consensus 158 ~~~~s~d~tiklWd~~--tG~~l--~tl~~~---------------~~~~~~v~f~~-------~~~~~l~~~-s~D~tI 210 (389)
+.. ..+.|+.++.. +|+.. .++.+. ...-..++|.. ...+.|..+ ...+.|
T Consensus 290 ad~--~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I 367 (433)
T 4hw6_A 290 IYN--GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTV 367 (433)
T ss_dssp EET--TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEE
T ss_pred EeC--CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEE
Confidence 643 34788887754 45321 233332 11124477731 123445444 578999
Q ss_pred EEEECCCCeEEEEccc-----------------CCCceEEEEEc-CCCcEEEEEc-CCeEEEEeC
Q 016446 211 QILDVRNAELMEVSRT-----------------EFMTPSAFIFL-YENQLFLTFR-NRTVAVWNF 256 (389)
Q Consensus 211 klWd~~tg~~~~~l~g-----------------h~~~v~sv~fs-pdg~~laS~s-D~tIklWd~ 256 (389)
+.++. +|+....... ....+..|++. ++|.++++-. .+.|+..++
T Consensus 368 ~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 368 RVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp EEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 99996 6765443211 13458999999 8999998887 888887765
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.20 E-value=0.0043 Score=61.57 Aligned_cols=208 Identities=7% Similarity=0.020 Sum_probs=135.2
Q ss_pred cccCceeEEEecCCCeEEEEecCCCeEEEEeCCCC----eEEEEec--CCcEEEEEEcC-CceEEEEecCCCCeeEEEEE
Q 016446 99 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY----TMLYSIS--DKHVQEIKISP-GIMLLIFNRSSSHVPLKILS 171 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g----~~l~tl~--~~~V~~vafS~-g~~la~~~~~s~d~tiklWd 171 (389)
.+..+..++|++.++++..+-...+.|+.+++... .....+. -.....+|+.+ ++.|..+. ...+.|.+.+
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d--~~~~~I~~~~ 187 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD--SVLGTVSVAD 187 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEE--TTTTEEEEEC
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEE--CCCCeEEEEe
Confidence 45667889999557777788778899999998642 2222222 24678999994 77776664 3347899999
Q ss_pred cCCCeEEEEEeecCCceeEEEEEecCCCeEEEEe--CCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEE-EEEc-
Q 016446 172 IEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ--ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLF-LTFR- 247 (389)
Q Consensus 172 ~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s--~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~l-aS~s- 247 (389)
+........+......-..|++. |.++.|..+. ..+.|...++............-..+..++++|+++.| .+-.
T Consensus 188 ~~g~~~~~l~~~~~~~P~~iavd-p~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~ 266 (400)
T 3p5b_L 188 TKGVKRKTLFRENGSKPRAIVVD-PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 266 (400)
T ss_dssp TTTCSEEEEEECSSCCEEEEEEE-TTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred CCCCceEEEEeCCCCCcceEEEe-cccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECC
Confidence 86544433333333455788887 5566666654 34789999986544444445555789999999765544 4545
Q ss_pred CCeEEEEeCCCcEEEEecc-C-cCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCC
Q 016446 248 NRTVAVWNFRGELVTSFED-H-LLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 325 (389)
Q Consensus 248 D~tIklWd~~G~~l~tl~g-h-~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH 325 (389)
.+.|...|++|.-.+++-. + ...+ -.+|++. .+.++.+- .. .+.|...|..+|+.+.++...
T Consensus 267 ~~~I~~~d~dG~~~~~~~~~~~~l~~----P~gl~v~-~~~lywtd-~~----------~~~V~~~~~~~G~~~~~i~~~ 330 (400)
T 3p5b_L 267 LHSISSIDVNGGNRKTILEDEKRLAH----PFSLAVF-EDKVFWTD-II----------NEAIFSANRLTGSDVNLLAEN 330 (400)
T ss_dssp TTEEEEEETTSCCCEEEEECSSTTSS----EEEEEEE-TTEEEEEE-SS----------SCSEEEEESSSCCCCEEEECS
T ss_pred CCEEEEEeCCCCccEEEEeCCCCCCC----CEEEEEe-CCEEEEec-CC----------CCeEEEEEcCCCCceEEEecC
Confidence 8899999998765544432 1 1122 2567762 33344443 22 378999998889888887643
No 284
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.18 E-value=0.0017 Score=66.97 Aligned_cols=241 Identities=13% Similarity=0.073 Sum_probs=141.2
Q ss_pred cEEEEEecCceEEEEecccceeeeeeecCC---cceEEEEEE-------eeCCCEEEEEEEeecCCCcceeeeeeeEeEe
Q 016446 14 DIVFALAHSGVCAAFSRETNRRICFLNVSP---DEVIRSLFY-------NKNNDSLITVSVYASDNFSSLKCRSTKIEYI 83 (389)
Q Consensus 14 ~~~a~~~~~gtiklW~~~tg~~l~tl~~~~---~~~v~sv~~-------spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i 83 (389)
.+.++--..+.|++.|++ ++.+.++.... .+..+.|+| +++|++|+.+...+... .. -+.+.+.+.
T Consensus 153 ~Lyv~~~~~~~i~~ID~~-~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~--~~-~~~V~~i~r 228 (496)
T 3kya_A 153 HLYICYDGHKAIQLIDLK-NRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG--DE-SPSVYIIKR 228 (496)
T ss_dssp EEEEEEETEEEEEEEETT-TTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG--GG-EEEEEEEEC
T ss_pred EEEEEECCCCeEEEEECC-CCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc--cc-CceEEEEec
Confidence 344444445789999987 44454554332 235899999 99999777754322110 00 022333332
Q ss_pred cc-CCCCC-c-ceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCC-------CCeE--------------EEEe
Q 016446 84 RR-GKPDS-G-FALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK-------NYTM--------------LYSI 139 (389)
Q Consensus 84 ~~-g~~~~-~-~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~-------~g~~--------------l~tl 139 (389)
.. |++.. . .... ..+.++..+++++.+|.++++--.++.|..+|++ +++. +.++
T Consensus 229 ~~~G~~~~~~~~~~v--~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~ 306 (496)
T 3kya_A 229 NADGTFDDRSDIQLI--AAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI 306 (496)
T ss_dssp CTTSCCSTTSCEEEE--EEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC
T ss_pred CCCCceeecccceee--ccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEec
Confidence 22 45421 0 0122 2355788899983378888888889999999997 5553 3344
Q ss_pred c-CCcEEEEEEc-CCceEEEEecCCCCeeEEEEE--cCCCeEE--EEEeecCC---------------ceeEEEEEe-c-
Q 016446 140 S-DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILS--IEDGTVL--KVFYHLLH---------------RNKKVDFIE-Q- 196 (389)
Q Consensus 140 ~-~~~V~~vafS-~g~~la~~~~~s~d~tiklWd--~~tG~~l--~tl~~~~~---------------~~~~v~f~~-~- 196 (389)
. ..+-..|+|+ +|.+|..+. ...+.|+.++ ..+++.. .++.+..+ .-....+.. +
T Consensus 307 ~~~~~p~~ia~~p~G~~lYvaD--~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~ 384 (496)
T 3kya_A 307 ADPSWEFQIFIHPTGKYAYFGV--INNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPD 384 (496)
T ss_dssp SSSSCCEEEEECTTSSEEEEEE--TTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTT
T ss_pred CCCCCceEEEEcCCCCEEEEEe--CCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEcccc
Confidence 3 3456899999 577666664 3347888854 4455431 34443211 011133331 1
Q ss_pred ----CCCeEEEE-eCCCcEEEEECCCCeEEEEcccC------------------------CCceEEEEEcCC-CcEEEEE
Q 016446 197 ----FNEKLLVK-QENENLQILDVRNAELMEVSRTE------------------------FMTPSAFIFLYE-NQLFLTF 246 (389)
Q Consensus 197 ----~~~~l~~~-s~D~tIklWd~~tg~~~~~l~gh------------------------~~~v~sv~fspd-g~~laS~ 246 (389)
..+.|..+ ..++.||..+ .+|.. .++.|. ...+..|++.|+ |.+.++-
T Consensus 385 ~~~~~~g~lyVaD~~N~rIr~i~-~~G~v-~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD 462 (496)
T 3kya_A 385 YTGEEEYDFYFVDRLNFCVRKVT-PEGIV-STYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHD 462 (496)
T ss_dssp CCSSCCEEEEEEEGGGTEEEEEC-TTCBE-EEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEE
T ss_pred ccccCCCeEEEEECCCCEEEEEe-CCCCE-EEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEe
Confidence 23344444 5889999999 47754 344321 245889999997 9998888
Q ss_pred c-CCeEEEEeCCC-cEEEEe
Q 016446 247 R-NRTVAVWNFRG-ELVTSF 264 (389)
Q Consensus 247 s-D~tIklWd~~G-~~l~tl 264 (389)
. ...||..++++ .++...
T Consensus 463 ~~N~rIrki~~~~~~~~~~~ 482 (496)
T 3kya_A 463 QVGHTIRTISMEQEENVAGD 482 (496)
T ss_dssp TTTTEEEEEEECCCC-----
T ss_pred CCCCEEEEEECCCCcccccC
Confidence 8 88999999985 455433
No 285
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.18 E-value=0.0023 Score=61.61 Aligned_cols=205 Identities=15% Similarity=0.147 Sum_probs=133.3
Q ss_pred cCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEE-EEec--CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCe
Q 016446 101 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML-YSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGT 176 (389)
Q Consensus 101 ~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l-~tl~--~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~ 176 (389)
..+.+++|++.+|++..+-...+.|+.+++..+... ..+. -.....+|+. .++.|..+. ...+.|.+.++. |.
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d--~~~~~I~~~~~d-G~ 111 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTD--SETNRIEVSNLD-GS 111 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEE--TTTTEEEEEETT-SC
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEE--CCCCEEEEEECC-CC
Confidence 345679998557888888888999999998765321 1121 2456789998 466666653 334689999975 44
Q ss_pred EEEEEe-ecCCceeEEEEEecCCCeEEEEe--CCCcEEEEECCCCeEEEEcccCCCceEEEEEcCC-CcEEEEEc-CCeE
Q 016446 177 VLKVFY-HLLHRNKKVDFIEQFNEKLLVKQ--ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYE-NQLFLTFR-NRTV 251 (389)
Q Consensus 177 ~l~tl~-~~~~~~~~v~f~~~~~~~l~~~s--~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspd-g~~laS~s-D~tI 251 (389)
...++. .....-..+++. |.++.|..+. ..+.|...++............-..++.++|+|+ +++..+-+ .+.|
T Consensus 112 ~~~~l~~~~~~~P~giavd-p~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I 190 (318)
T 3sov_A 112 LRKVLFWQELDQPRAIALD-PSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFI 190 (318)
T ss_dssp SCEEEECSSCSSEEEEEEE-GGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred cEEEEEeCCCCCccEEEEe-CCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEE
Confidence 444443 333445788887 5566666654 4688888888543333333444567899999985 55555556 8899
Q ss_pred EEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCC
Q 016446 252 AVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 325 (389)
Q Consensus 252 klWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH 325 (389)
...|++|.-.+++-...... -..+++..+ .++.+ .. ..+.|...|..+|+.+.++...
T Consensus 191 ~~~d~dG~~~~~~~~~~~~~----P~glav~~~-~lywt-d~----------~~~~V~~~~~~~G~~~~~i~~~ 248 (318)
T 3sov_A 191 HKSNLDGTNRQAVVKGSLPH----PFALTLFED-ILYWT-DW----------STHSILACNKYTGEGLREIHSD 248 (318)
T ss_dssp EEEETTSCSCEEEECSCCSC----EEEEEEETT-EEEEE-ET----------TTTEEEEEETTTCCSCEEEECC
T ss_pred EEEcCCCCceEEEecCCCCC----ceEEEEeCC-EEEEE-ec----------CCCeEEEEECCCCCceEEEeCC
Confidence 99999876544443212222 367777533 34444 22 2479999998889887777543
No 286
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.12 E-value=0.0033 Score=62.40 Aligned_cols=182 Identities=10% Similarity=0.058 Sum_probs=120.0
Q ss_pred CCeEEEEeCCCCeEEEEec-CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCC----eEEEEEeecCCceeEEEEEe
Q 016446 122 DSIYKVFDLKNYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDG----TVLKVFYHLLHRNKKVDFIE 195 (389)
Q Consensus 122 D~tiklWdl~~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG----~~l~tl~~~~~~~~~v~f~~ 195 (389)
...|+.-++...+....+. ...+.+|+|. .++.|..+. ...+.|+.+++.++ .....+.........+++.
T Consensus 91 ~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD--~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD- 167 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSD--LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD- 167 (400)
T ss_dssp TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEE--TTTTEEEEEEC------CCCEEEECSSCSCEEEEEEE-
T ss_pred cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEe--cCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEE-
Confidence 4788888987665444444 3678999999 467776663 33478988997652 2222333233455677776
Q ss_pred cCCCeEEEE-eCCCcEEEEECCCCeEEEEcccCCCceEEEEEcC-CCcEEEEEc--CCeEEEEeCCCcEEEEecc-CcCC
Q 016446 196 QFNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFR--NRTVAVWNFRGELVTSFED-HLLW 270 (389)
Q Consensus 196 ~~~~~l~~~-s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fsp-dg~~laS~s--D~tIklWd~~G~~l~tl~g-h~~~ 270 (389)
+.++.|... ...+.|.+.|+........+......+..+++.| +|.++.+-. .+.|...+++|...+.+-. ...+
T Consensus 168 ~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~ 247 (400)
T 3p5b_L 168 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQW 247 (400)
T ss_dssp TTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSC
T ss_pred ecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCc
Confidence 335566555 5788999999976665555555566799999998 566666664 4789888998876555532 2222
Q ss_pred cCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEe
Q 016446 271 HPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 322 (389)
Q Consensus 271 ~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl 322 (389)
-+.|+|+|+++.|--+-. ..+.|...|+. |....++
T Consensus 248 -----P~glavd~~~~~lY~aD~----------~~~~I~~~d~d-G~~~~~~ 283 (400)
T 3p5b_L 248 -----PNGITLDLLSGRLYWVDS----------KLHSISSIDVN-GGNRKTI 283 (400)
T ss_dssp -----EEEEEEETTTTEEEEEET----------TTTEEEEEETT-SCCCEEE
T ss_pred -----eEEEEEEeCCCEEEEEEC----------CCCEEEEEeCC-CCccEEE
Confidence 489999998887776533 24789999975 5544444
No 287
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.07 E-value=0.0034 Score=61.35 Aligned_cols=143 Identities=9% Similarity=0.072 Sum_probs=84.8
Q ss_pred cccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCe-EEEEec-----CCcEEEEEEcCC----ceEEEEecC-CCC---
Q 016446 99 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSIS-----DKHVQEIKISPG----IMLLIFNRS-SSH--- 164 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~-~l~tl~-----~~~V~~vafS~g----~~la~~~~~-s~d--- 164 (389)
.+.+|..++|. |||+++++- .++.|++++ .+|+ .+..+. ......|+|+|+ ..|..+... ..+
T Consensus 27 ~l~~P~~ia~~-pdG~l~V~e-~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 27 DLEVPWSIAPL-GGGRYLVTE-RPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCSCEEEEEEE-ETTEEEEEE-TTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCCCeEEEEc-CCCeEEEEe-CCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 35578899998 899988865 459999998 4676 333332 246899999964 666555432 122
Q ss_pred -eeEEEEEcCCC-------eEE-EEEe-ecCCceeEEEEEecCCCeEEEEeC-------------CCcEEEEECCCCe--
Q 016446 165 -VPLKILSIEDG-------TVL-KVFY-HLLHRNKKVDFIEQFNEKLLVKQE-------------NENLQILDVRNAE-- 219 (389)
Q Consensus 165 -~tiklWd~~tG-------~~l-~tl~-~~~~~~~~v~f~~~~~~~l~~~s~-------------D~tIklWd~~tg~-- 219 (389)
..|..++...+ +.+ ..+. ...|.-..++|. |++...++.+. .+.|.-.|.. |+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~-pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p 181 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFG-PDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPP 181 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEEC-TTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCC
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEEC-CCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCC
Confidence 45666776554 122 2243 122344778997 66654444222 1345555553 32
Q ss_pred -------EEEEcccCCCceEEEEEcC-CCcEEEEEc
Q 016446 220 -------LMEVSRTEFMTPSAFIFLY-ENQLFLTFR 247 (389)
Q Consensus 220 -------~~~~l~gh~~~v~sv~fsp-dg~~laS~s 247 (389)
......||. .++.++|.| +|+++++-.
T Consensus 182 ~~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 182 ADNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATEH 216 (354)
T ss_dssp TTSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEEC
T ss_pred CCCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEec
Confidence 111123443 356799999 899888774
No 288
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.05 E-value=0.0015 Score=64.55 Aligned_cols=192 Identities=13% Similarity=0.190 Sum_probs=124.5
Q ss_pred eEEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEEEcCCc-----e--EEEEecCCC--CeeEEEEEc--CCCeEEEEEe
Q 016446 114 KVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGI-----M--LLIFNRSSS--HVPLKILSI--EDGTVLKVFY 182 (389)
Q Consensus 114 ~~Las~s~D~tiklWdl~~g~~l~tl~~~~V~~vafS~g~-----~--la~~~~~s~--d~tiklWd~--~tG~~l~tl~ 182 (389)
.+++...-++-+.++|+ +|+.++.+....++.|..-||- . ||.++ +.. +++|.++++ .+++ |..+.
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as-~R~~~~n~l~vf~iDp~~~~-l~~i~ 117 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAAS-NRSEGKNTIEIYAIDGKNGT-LQSMT 117 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEE-ECSTTCCEEEEEEECTTTCC-EEECS
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccCCCcccEEEecccccCCceEeEEEEe-CCCCCCCeEEEEEECCCCCc-eeecc
Confidence 33444445678999999 9999999987777777766543 2 33332 333 589999966 5665 55552
Q ss_pred e------c-CCceeEEEE--EecCCC-eEEEEeCCCcEEEEEC-------CCCeEEEEcccCCCceEEEEEcCCCcEEEE
Q 016446 183 H------L-LHRNKKVDF--IEQFNE-KLLVKQENENLQILDV-------RNAELMEVSRTEFMTPSAFIFLYENQLFLT 245 (389)
Q Consensus 183 ~------~-~~~~~~v~f--~~~~~~-~l~~~s~D~tIklWd~-------~tg~~~~~l~gh~~~v~sv~fspdg~~laS 245 (389)
. . ......+++ ++..+. ++.....++.+..|++ .+++.++++.-. ..+..++..|+...|--
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~g~Lyv 196 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEYGRLYI 196 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTTTEEEE
T ss_pred ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCCCeEEE
Confidence 1 0 133455666 322343 3555778899999998 345667776654 47889999887666666
Q ss_pred Ec-CCeEEEEeCC------CcEEEEec-cCcCCcCCCCeeEEEE--CCCCC-EEEEEecCCCcccccCCCCCeEEEEeCC
Q 016446 246 FR-NRTVAVWNFR------GELVTSFE-DHLLWHPDCNTNNIYI--TSDQD-LIISYCKAEPEDQWMEGSAGSINVSSIL 314 (389)
Q Consensus 246 ~s-D~tIklWd~~------G~~l~tl~-gh~~~~~~~~v~sv~f--SpdG~-~laS~s~D~~~~~~~~s~D~tIklWd~~ 314 (389)
+- |.-|..++.+ ++++..+. +|... .+..+++ .+||+ ||+..|.. +++.-++|.+
T Consensus 197 ~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~a----DvEGLai~~~~~g~gyLivSsQG----------~~s~~Vydr~ 262 (355)
T 3amr_A 197 AEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTR----DIEGLTIYYAADGKGYLMASSQG----------NSSYAIYDRQ 262 (355)
T ss_dssp EETTTEEEEEECSTTSCSCCEEEEEBSSSSBCS----CEEEEEEEECGGGCEEEEEEEGG----------GTEEEEEESS
T ss_pred ecccceEEEEeCCcCCCCCceEEEEecCCcccc----CcceEEEEecCCCCEEEEEEcCC----------CCEEEEEECC
Confidence 65 7554444433 34665553 33322 1677877 78888 77777754 4799999986
Q ss_pred -CCeEEEEec
Q 016446 315 -TGKCLAKIN 323 (389)
Q Consensus 315 -tg~~l~tl~ 323 (389)
+.+.+..++
T Consensus 263 ~~~~~vg~f~ 272 (355)
T 3amr_A 263 GKNKYVADFR 272 (355)
T ss_dssp TTCCEEEEEE
T ss_pred CCCcEEEEEE
Confidence 678888875
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.84 E-value=0.018 Score=62.55 Aligned_cols=214 Identities=9% Similarity=0.044 Sum_probs=138.6
Q ss_pred cccCceeEEEecCCCeEEEEecCCCeEEEEeCCCC----eEEEEec--CCcEEEEEEc-CCceEEEEecCCCCeeEEEEE
Q 016446 99 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY----TMLYSIS--DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILS 171 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g----~~l~tl~--~~~V~~vafS-~g~~la~~~~~s~d~tiklWd 171 (389)
.+..+..++|++.++++..+-...+.|+.+++... .....+. -.....||+. .++.|..+. ...+.|.+-+
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD--~~~~~I~v~~ 499 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD--SVLGTVSVAD 499 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEE--TTTTEEEEEE
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEe--cCCCeEEEEe
Confidence 45567789998447888888888899999998642 2222233 2467789999 577777764 4457999999
Q ss_pred cCCCeEEEEEe-ecCCceeEEEEEecCCCeEEEEe--CCCcEEEEECCCCeEEEEcccCCCceEEEEEcCC-CcEEEEEc
Q 016446 172 IEDGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQ--ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYE-NQLFLTFR 247 (389)
Q Consensus 172 ~~tG~~l~tl~-~~~~~~~~v~f~~~~~~~l~~~s--~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspd-g~~laS~s 247 (389)
+. |+..++|. .....-..|++. |..+.|..+- ..+.|...++........+...-.++..|++.|. +++..+-.
T Consensus 500 ld-G~~~~~l~~~~l~~P~gIaVD-p~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~ 577 (791)
T 3m0c_C 500 TK-GVKRKTLFRENGSKPRAIVVD-PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 577 (791)
T ss_dssp TT-SSSEEEEEECTTCCEEEEEEE-TTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CC-CCeEEEEEeCCCCCcceEEEe-cCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeC
Confidence 76 45555554 334456888887 5566666654 3378999999655544444555578999999965 55555555
Q ss_pred -CCeEEEEeCCCcEEEEec-cCcC-CcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecC
Q 016446 248 -NRTVAVWNFRGELVTSFE-DHLL-WHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 324 (389)
Q Consensus 248 -D~tIklWd~~G~~l~tl~-gh~~-~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~g 324 (389)
.+.|...+++|..++++- ++.. .+ -.+|++ ++.+|.-... ..+.|..-|..+|+.+.++..
T Consensus 578 ~~~~I~~~d~dG~~~~~v~~~~~~l~~----P~glav--~~~~lYwtD~----------~~~~I~~~dk~tG~~~~~l~~ 641 (791)
T 3m0c_C 578 KLHSISSIDVNGGNRKTILEDEKRLAH----PFSLAV--FEDKVFWTDI----------INEAIFSANRLTGSDVNLLAE 641 (791)
T ss_dssp TTTEEEEEETTSCSCEEEEECTTTTSS----EEEEEE--ETTEEEEEET----------TTTEEEEEETTTCCCCEEEEC
T ss_pred CCCcEEEEecCCCceEEEecCCCccCC----CCEEEE--eCCEEEEEEC----------CCCEEEEEeCCCCcceEEeec
Confidence 789999999876554443 2221 11 246666 4445544332 247888888889988888865
Q ss_pred CCCCCCcc
Q 016446 325 TNCSPKVD 332 (389)
Q Consensus 325 H~~~~~~~ 332 (389)
.-..|.+.
T Consensus 642 ~l~~P~~i 649 (791)
T 3m0c_C 642 NLLSPEDM 649 (791)
T ss_dssp SCSCCCCE
T ss_pred CCCCceeE
Confidence 44334433
No 290
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.75 E-value=0.062 Score=56.54 Aligned_cols=283 Identities=11% Similarity=0.069 Sum_probs=160.1
Q ss_pred EEEee---ccEEEEEecCceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEe-
Q 016446 8 EIVAA---RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYI- 83 (389)
Q Consensus 8 ~i~~~---~~~~a~~~~~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i- 83 (389)
.|.+. +.+..+-...+.|.+-+++ |....++-...-+.-+.|++.|.+..|..+ +.+.. . +|+-.
T Consensus 88 GlAvD~~~~~ly~~d~~~~~I~v~~~d-G~~~~~l~~~~l~~P~~Iavdp~~g~ly~t--D~g~~------~--~I~r~~ 156 (619)
T 3s94_A 88 GLACDWLGEKLYWTDSETNRIEVSNLD-GSLRKVLFWQELDQPRAIALDPSSGFMYWT--DWGEV------P--KIERAG 156 (619)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEECSSCSCCCCEEEETTTTEEEEE--ECSSS------C--EEEEEE
T ss_pred eEEEEecCCEEEEEeCCCCEEEEEECC-CCCEEEEEeCCCCCCceEEEecCCCeEEEe--ccCCC------C--EEEEEE
Confidence 44444 4556666778899999985 766656653333566899999986555442 11111 1 22222
Q ss_pred ccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEe-c--CCcEEEEEEcCCceEEEEec
Q 016446 84 RRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-S--DKHVQEIKISPGIMLLIFNR 160 (389)
Q Consensus 84 ~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl-~--~~~V~~vafS~g~~la~~~~ 160 (389)
..|.. ...+. ...+.+|..+++++.++++..+-+..+.|..-|+. |.....+ . ...-.+|++..+ .|..+.
T Consensus 157 ~dG~~--~~~l~-~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gi~~~~~-~ly~td- 230 (619)
T 3s94_A 157 MDGSS--RFIII-NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD-GTNRQAVVKGSLPHPFALTLFED-ILYWTD- 230 (619)
T ss_dssp TTSCS--CEEEE-CSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSS-CCEEC---------CCCEEESSS-EEEEEC-
T ss_pred CCCCc--eEEEE-eCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCC-CCccEEEEeCCCCCceEEEEeCC-EEEEec-
Confidence 34543 12222 24566889999995467777777778889999984 4433322 2 122346677644 555553
Q ss_pred CCCCeeEEEEEcCCCeEEEEEeecCCceeEEEE-------------------------E----------ecCC-------
Q 016446 161 SSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDF-------------------------I----------EQFN------- 198 (389)
Q Consensus 161 ~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f-------------------------~----------~~~~------- 198 (389)
...+.|..-|..+|+.+..+......-..|++ . +|.+
T Consensus 231 -~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~ 309 (619)
T 3s94_A 231 -WSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENG 309 (619)
T ss_dssp -TTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTS
T ss_pred -CCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccC
Confidence 34478988998888766655422111122222 1 1111
Q ss_pred -------CeEEEEeCCCcEEEEECCCCeE--EEEcccCCCceEEEEEcC-CCcEEEEEc-CCeEEEEeCCCcEEEEeccC
Q 016446 199 -------EKLLVKQENENLQILDVRNAEL--MEVSRTEFMTPSAFIFLY-ENQLFLTFR-NRTVAVWNFRGELVTSFEDH 267 (389)
Q Consensus 199 -------~~l~~~s~D~tIklWd~~tg~~--~~~l~gh~~~v~sv~fsp-dg~~laS~s-D~tIklWd~~G~~l~tl~gh 267 (389)
+.++.-+..+.|+--++.+++. +......-..+.+++|.+ +++++.+-. .+.|+-++++|....++...
T Consensus 310 ~~C~~~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~ 389 (619)
T 3s94_A 310 KTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTA 389 (619)
T ss_dssp SCBCSSCSEEEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred cccCCCCceEEEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEEC
Confidence 1112212234666667765432 111112234678999988 677777776 88999999986533333321
Q ss_pred cCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEec
Q 016446 268 LLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKIN 323 (389)
Q Consensus 268 ~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~ 323 (389)
... ....+||.+.++.|.-+. +..++|.+-++. |+...+|-
T Consensus 390 ~~~----~p~GlAvD~~~~~lY~tD----------~~~~~I~v~~~~-G~~~~~l~ 430 (619)
T 3s94_A 390 QIA----HPDGIAVDWVARNLYWTD----------TGTDRIEVTRLN-GTMRKILI 430 (619)
T ss_dssp SCS----CCCEEEEETTTTEEEEEE----------TTTTEEEEEETT-SCSCEEEE
T ss_pred CCC----CcCceEEecccCcEEEEe----------CCCCcEEEEeCC-CCeEEEEE
Confidence 111 147999998655554432 234789998865 65555554
No 291
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.75 E-value=0.012 Score=55.34 Aligned_cols=183 Identities=11% Similarity=0.173 Sum_probs=115.0
Q ss_pred ceeEEEecCCC-eEEEEecCCCeEEEEeCCCCeEEEEec--C-CcEEEEEEcCCceEEEEecCCCCeeEEEEEcCCCe--
Q 016446 103 PGFVEFDDVNG-KVLTYSAQDSIYKVFDLKNYTMLYSIS--D-KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGT-- 176 (389)
Q Consensus 103 ~~~v~Fs~pdG-~~Las~s~D~tiklWdl~~g~~l~tl~--~-~~V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~-- 176 (389)
+..++|+ |++ ++.|....++.|-.-|+. |+.+.++. + .....|++.++..++.++. .++.+.+.++....
T Consensus 29 lSGla~~-~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E--~~~~l~~~~v~~~~~i 104 (255)
T 3qqz_A 29 ISSLTWS-AQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDE--RDYAIYVISLTPNSEV 104 (255)
T ss_dssp EEEEEEE-TTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEET--TTTEEEEEEECTTCCE
T ss_pred cceeEEe-CCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEEC--CCCcEEEEEcCCCCee
Confidence 3469998 654 555556678888888986 99888875 2 5788999995444544432 33678788765433
Q ss_pred -EEEEEee-cC-----CceeEEEEEecCCCeEEEEeCCCcEEEEECC---CCeEEEEc-------ccCCCceEEEEEcCC
Q 016446 177 -VLKVFYH-LL-----HRNKKVDFIEQFNEKLLVKQENENLQILDVR---NAELMEVS-------RTEFMTPSAFIFLYE 239 (389)
Q Consensus 177 -~l~tl~~-~~-----~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~---tg~~~~~l-------~gh~~~v~sv~fspd 239 (389)
.+..... .. .....+++. |.+++|.++.+.....||.+. ++..++.+ ..+-..+.+++|.|.
T Consensus 105 ~~~~~~~~~~~~~~~N~g~EGLA~d-~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~ 183 (255)
T 3qqz_A 105 KILKKIKIPLQESPTNCGFEGLAYS-RQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQ 183 (255)
T ss_dssp EEEEEEECCCSSCCCSSCCEEEEEE-TTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETT
T ss_pred eeeeeeccccccccccCCcceEEEe-CCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCC
Confidence 2333331 11 112789998 567777777765566666664 11122222 113345789999885
Q ss_pred -CcEEEEEc-CCeEEEEeCCCcEEEEec---cC-cC--CcCCCCeeEEEECCCCCEEEEEec
Q 016446 240 -NQLFLTFR-NRTVAVWNFRGELVTSFE---DH-LL--WHPDCNTNNIYITSDQDLIISYCK 293 (389)
Q Consensus 240 -g~~laS~s-D~tIklWd~~G~~l~tl~---gh-~~--~~~~~~v~sv~fSpdG~~laS~s~ 293 (389)
|++++.+. .+.+-..|.+|+.+..+. |. .. .++ .-..|+|.|+|++.++ |+
T Consensus 184 tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~--qpEGia~d~~G~lyIv-sE 242 (255)
T 3qqz_A 184 KNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIK--QAEGVAMDASGNIYIV-SE 242 (255)
T ss_dssp TTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCC--SEEEEEECTTCCEEEE-ET
T ss_pred CCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccC--CCCeeEECCCCCEEEE-cC
Confidence 55666665 889999999998765543 21 10 011 1379999999998777 44
No 292
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.72 E-value=0.00032 Score=75.03 Aligned_cols=213 Identities=9% Similarity=0.068 Sum_probs=129.8
Q ss_pred ccCceeEEEecCCCeEEEEecCCCeEEEEeCCC----CeEEEEecC--CcEEEEEEc-CCceEEEEecCCCCeeEEEEEc
Q 016446 100 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN----YTMLYSISD--KHVQEIKIS-PGIMLLIFNRSSSHVPLKILSI 172 (389)
Q Consensus 100 ~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~----g~~l~tl~~--~~V~~vafS-~g~~la~~~~~s~d~tiklWd~ 172 (389)
+..+..|+|++.++.+..+-...+.|+..++.+ ......+.. .....||+. .++.|..+ +...+.|.+.++
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~t--D~~~~~I~v~d~ 482 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWT--DSVLGTVSVADT 482 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEEC--CTTTSCEEEEBS
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEE--eccCCeEEEEec
Confidence 445678999844566667767788999999865 122222221 245678988 56666554 344578999997
Q ss_pred CCCeEEEEEe-ecCCceeEEEEEecCCCeEEEEe--CCCcEEEEECCCCeEEEEcccCCCceEEEEEcCC-CcEEEEEc-
Q 016446 173 EDGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQ--ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYE-NQLFLTFR- 247 (389)
Q Consensus 173 ~tG~~l~tl~-~~~~~~~~v~f~~~~~~~l~~~s--~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspd-g~~laS~s- 247 (389)
.+ ..+.++. .....-..|++. |.++.|..+. ..+.|...++........+...-..++.|+|+|+ +++..+-+
T Consensus 483 dg-~~~~~l~~~~~~~P~giavD-p~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~ 560 (699)
T 1n7d_A 483 KG-VKRKTLFREQGSKPRAIVVD-PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 560 (699)
T ss_dssp SS-CCEEEECCCSSCCCCCEECC-SSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETT
T ss_pred CC-CceEEEEeCCCCCcceEEEc-cCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecC
Confidence 64 4444443 222444677776 4456655543 2378888888543333333344567889999986 55556666
Q ss_pred CCeEEEEeCCCcEEEEeccC--cCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCC
Q 016446 248 NRTVAVWNFRGELVTSFEDH--LLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINAT 325 (389)
Q Consensus 248 D~tIklWd~~G~~l~tl~gh--~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH 325 (389)
.+.|...+++|.-.+++... ...++ ..|++..+ .++++. . ..+.|...|..+|+.+.+|...
T Consensus 561 ~~~I~~~d~dG~~~~~~~~~~~~~~~P----~glavd~~-~lywtd-~----------~~~~V~~~d~~~G~~~~~i~~~ 624 (699)
T 1n7d_A 561 LHSISSIDVNGGNRKTILEDEKRLAHP----FSLAVFED-KVFWTD-I----------INEAIFSANRLTGSDVNLLAEN 624 (699)
T ss_dssp TTEEEEECSSSSCCEEECCCSSSCSSC----CCCEEETT-EEEEEC-S----------TTTCEEEEETTTEEEEECCCTT
T ss_pred CCeEEEEccCCCceEEEEecCCcCCCc----eEeEEECC-EEEEEe-C----------CCCeEEEEEccCCCceEEeecC
Confidence 88999999987554444321 11221 45666444 333332 2 2479999998899999888643
Q ss_pred CCCCCcc
Q 016446 326 NCSPKVD 332 (389)
Q Consensus 326 ~~~~~~~ 332 (389)
...|.+.
T Consensus 625 ~~~P~~i 631 (699)
T 1n7d_A 625 LLSPEDM 631 (699)
T ss_dssp CSSCCCC
T ss_pred CCCCcEE
Confidence 3234433
No 293
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.71 E-value=0.00014 Score=77.97 Aligned_cols=184 Identities=10% Similarity=0.020 Sum_probs=112.5
Q ss_pred CCCeEEEEeCCCCeEEEEec-CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCC----CeEEEEEeecCCceeEEEEE
Q 016446 121 QDSIYKVFDLKNYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIED----GTVLKVFYHLLHRNKKVDFI 194 (389)
Q Consensus 121 ~D~tiklWdl~~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~t----G~~l~tl~~~~~~~~~v~f~ 194 (389)
..+.|+.-++.+.+....+. ...+.+|+|. .++.|..+ +...+.|+..++.+ ......+.........|++.
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~s--D~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD 461 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWS--DLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 461 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEEC--CTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred CccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEE--ecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence 34678888887666544443 3567789999 47777665 33457898898765 12222221111233456654
Q ss_pred ecCCCeEEEE-eCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCC-CcEEEEEc-C-CeEEEEeCCCcEEEEeccCcCC
Q 016446 195 EQFNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLYE-NQLFLTFR-N-RTVAVWNFRGELVTSFEDHLLW 270 (389)
Q Consensus 195 ~~~~~~l~~~-s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspd-g~~laS~s-D-~tIklWd~~G~~l~tl~gh~~~ 270 (389)
+.++.|..+ ...++|.+.++..+.....+......+..+++.|+ |.++.+-. . ++|...+++|...+.+......
T Consensus 462 -~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~ 540 (699)
T 1n7d_A 462 -WIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ 540 (699)
T ss_dssp -CSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCS
T ss_pred -eeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCC
Confidence 234555554 57789999999766555555544567889999985 55555554 3 7888888887765555322211
Q ss_pred cCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEe
Q 016446 271 HPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 322 (389)
Q Consensus 271 ~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl 322 (389)
. -+.|+|+|++++|.-+-. ..+.|...|+. |.-.+++
T Consensus 541 ~----PnGlavd~~~~~LY~aD~----------~~~~I~~~d~d-G~~~~~~ 577 (699)
T 1n7d_A 541 W----PNGITLDLLSGRLYWVDS----------KLHSISSIDVN-GGNRKTI 577 (699)
T ss_dssp S----CCCEEECTTTCCEEEEET----------TTTEEEEECSS-SSCCEEE
T ss_pred C----ccEEEEeccCCEEEEEec----------CCCeEEEEccC-CCceEEE
Confidence 1 378999998766654432 24789999975 5444444
No 294
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.71 E-value=0.033 Score=60.51 Aligned_cols=184 Identities=10% Similarity=0.021 Sum_probs=120.1
Q ss_pred CCCeEEEEeCCCCeEEEEec-CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCC----eEEEEEeecCCceeEEEEE
Q 016446 121 QDSIYKVFDLKNYTMLYSIS-DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDG----TVLKVFYHLLHRNKKVDFI 194 (389)
Q Consensus 121 ~D~tiklWdl~~g~~l~tl~-~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG----~~l~tl~~~~~~~~~v~f~ 194 (389)
....|+.-++...+....+. ...+.+|+|. .+++|..+.. ..+.|+.+++... .....+.........|++.
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~--~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD 479 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 479 (791)
T ss_dssp CBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEET--TTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred cccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeec--cceeEEEEeccCCCCCcceeEEEecCCCCcceeeee
Confidence 34678888886655443344 3678899999 4666666543 3478988998642 2223333233555778876
Q ss_pred ecCCCeEEEE-eCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCC-CcEEEEEc-C-CeEEEEeCCCcEEEEeccCcCC
Q 016446 195 EQFNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLYE-NQLFLTFR-N-RTVAVWNFRGELVTSFEDHLLW 270 (389)
Q Consensus 195 ~~~~~~l~~~-s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspd-g~~laS~s-D-~tIklWd~~G~~l~tl~gh~~~ 270 (389)
+.++.|..+ ...++|.+.++........+......+..||+.|. |.++.+-. . +.|..-+++|...++|-.....
T Consensus 480 -~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~ 558 (791)
T 3m0c_C 480 -WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ 558 (791)
T ss_dssp -TTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCS
T ss_pred -ecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCC
Confidence 446666665 58899999999765544444455667999999986 67777765 4 7899999998766666433211
Q ss_pred cCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEe
Q 016446 271 HPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 322 (389)
Q Consensus 271 ~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl 322 (389)
. -+.|++.|+++.|.-+-. ..+.|...|+. |....++
T Consensus 559 ~----P~GLavD~~~~~LYwaD~----------~~~~I~~~d~d-G~~~~~v 595 (791)
T 3m0c_C 559 W----PNGITLDLLSGRLYWVDS----------KLHSISSIDVN-GGNRKTI 595 (791)
T ss_dssp C----EEEEEEETTTTEEEEEET----------TTTEEEEEETT-SCSCEEE
T ss_pred C----ceEEEEecCCCeEEEEeC----------CCCcEEEEecC-CCceEEE
Confidence 1 489999988777766533 24789999965 5544444
No 295
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.65 E-value=0.016 Score=54.61 Aligned_cols=190 Identities=14% Similarity=0.172 Sum_probs=118.2
Q ss_pred eecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEE
Q 016446 39 LNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTY 118 (389)
Q Consensus 39 l~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las 118 (389)
|.+-. +.+-.++|+|++++|..+.. .+ ..+..-|.. |++....++ .-...+..|++. ++|+++++
T Consensus 22 l~g~~-~~lSGla~~~~~~~L~aV~d---~~------~~I~~ld~~-g~v~~~i~l---~g~~D~EGIa~~-~~g~~~vs 86 (255)
T 3qqz_A 22 IAGIT-NNISSLTWSAQSNTLFSTIN---KP------AAIVEMTTN-GDLIRTIPL---DFVKDLETIEYI-GDNQFVIS 86 (255)
T ss_dssp CTTCC-SCEEEEEEETTTTEEEEEEE---TT------EEEEEEETT-CCEEEEEEC---SSCSSEEEEEEC-STTEEEEE
T ss_pred CCCcc-cCcceeEEeCCCCEEEEEEC---CC------CeEEEEeCC-CCEEEEEec---CCCCChHHeEEe-CCCEEEEE
Confidence 44543 45899999999998888652 23 344444534 775221111 222456679997 89998777
Q ss_pred ecCCCeEEEEeCCCCeE---EEEe--c------CCcEEEEEEcC-CceEEEEecCCCCeeEEEEEcC---CCeEEEEEee
Q 016446 119 SAQDSIYKVFDLKNYTM---LYSI--S------DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIE---DGTVLKVFYH 183 (389)
Q Consensus 119 ~s~D~tiklWdl~~g~~---l~tl--~------~~~V~~vafS~-g~~la~~~~~s~d~tiklWd~~---tG~~l~tl~~ 183 (389)
.-.++.+.+.++..... +... . ......+|+.| +++|.++...+ +.+||.+. +++.+..+..
T Consensus 87 ~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~---p~~i~~~~g~~~~~~l~i~~~ 163 (255)
T 3qqz_A 87 DERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN---PIEVYKVNGLLSSNELHISKD 163 (255)
T ss_dssp ETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS---SEEEEEEESTTCSSCCEEEEC
T ss_pred ECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC---CceEEEEcccccCCceeeecc
Confidence 66778888888754331 2222 1 23568999995 66776664332 44555443 2222333321
Q ss_pred -------cCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEE--cc-cC------CCceEEEEEcCCCcEEEEEc
Q 016446 184 -------LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEV--SR-TE------FMTPSAFIFLYENQLFLTFR 247 (389)
Q Consensus 184 -------~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~--l~-gh------~~~v~sv~fspdg~~laS~s 247 (389)
+....-.++|.+..+..++.+.+.+.+-..|.+ |+.+.. |. +. ..+...|+|.|+|++.+++-
T Consensus 164 ~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE 242 (255)
T 3qqz_A 164 KALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSE 242 (255)
T ss_dssp HHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEET
T ss_pred hhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcC
Confidence 223457899986555555557799999999985 555554 33 32 24889999999999988864
No 296
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.65 E-value=0.048 Score=52.32 Aligned_cols=226 Identities=10% Similarity=0.055 Sum_probs=142.4
Q ss_pred CceEEEEecccce--eeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeec
Q 016446 22 SGVCAAFSRETNR--RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESES 99 (389)
Q Consensus 22 ~gtiklW~~~tg~--~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~ 99 (389)
...|+..+++.+. ....+.+ ......|+|.+.++.|.-+ +. .. ..|...++..+.. ...+.. ..
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~--~~~~~~ld~d~~~~~lyw~--D~-~~------~~I~r~~~~g~~~--~~~~~~-~~ 77 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGG--LEDAAAVDFVFSHGLIYWS--DV-SE------EAIKRTEFNKTES--VQNVVV-SG 77 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEE--EEEEEEEEEEGGGTEEEEE--ET-TT------TEEEEEETTSSSC--CCEEEE-EC
T ss_pred cCeEEEEECCCCceEEEEEecC--CCccEEEEEEeCCCEEEEE--EC-CC------CcEEEEEccCCCc--eEEEEc-CC
Confidence 4678888887442 1112222 2456789999976666542 11 22 3444445333321 112222 34
Q ss_pred ccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec---CCcEEEEEEcC-CceEEEEecCCCCeeEEEEEcCCC
Q 016446 100 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS---DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDG 175 (389)
Q Consensus 100 ~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~---~~~V~~vafS~-g~~la~~~~~s~d~tiklWd~~tG 175 (389)
+..|..+++++.+|.+..+-...+.|.+.++. |+....+. ...-.++++.| ++.|..+... ....|...++. |
T Consensus 78 l~~p~glavd~~~g~ly~~d~~~~~I~~~~~d-G~~~~~l~~~~~~~P~giavdp~~g~ly~td~~-~~~~I~r~~~d-G 154 (318)
T 3sov_A 78 LLSPDGLACDWLGEKLYWTDSETNRIEVSNLD-GSLRKVLFWQELDQPRAIALDPSSGFMYWTDWG-EVPKIERAGMD-G 154 (318)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEECSSCSSEEEEEEEGGGTEEEEEECS-SSCEEEEEETT-S
T ss_pred CCCccEEEEEcCCCeEEEEECCCCEEEEEECC-CCcEEEEEeCCCCCccEEEEeCCCCEEEEEecC-CCCEEEEEEcC-C
Confidence 55678899984477888888888999999984 44333332 25678999995 5666665422 23577777754 5
Q ss_pred eEEEEEe-ecCCceeEEEEEecCCCeEEEE-eCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-CCeEE
Q 016446 176 TVLKVFY-HLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVA 252 (389)
Q Consensus 176 ~~l~tl~-~~~~~~~~v~f~~~~~~~l~~~-s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIk 252 (389)
+...++. .....-..+++. ++++.|..+ +..+.|...|+........+.+....+..+++. .+.++.+-. .+.|.
T Consensus 155 ~~~~~~~~~~l~~Pnglavd-~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~ 232 (318)
T 3sov_A 155 SSRFIIINSEIYWPNGLTLD-YEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSIL 232 (318)
T ss_dssp CSCEEEECSSCSCEEEEEEE-TTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEE
T ss_pred CCeEEEEECCCCCccEEEEe-ccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEE
Confidence 5544443 222344788987 567777766 578999999997544444445456678888885 456666776 88999
Q ss_pred EEeC-CCcEEEEecc
Q 016446 253 VWNF-RGELVTSFED 266 (389)
Q Consensus 253 lWd~-~G~~l~tl~g 266 (389)
..|. +|+.++++..
T Consensus 233 ~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 233 ACNKYTGEGLREIHS 247 (318)
T ss_dssp EEETTTCCSCEEEEC
T ss_pred EEECCCCCceEEEeC
Confidence 9998 4887776654
No 297
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.64 E-value=0.049 Score=57.45 Aligned_cols=177 Identities=10% Similarity=0.066 Sum_probs=119.3
Q ss_pred CCCeEEEEeCCCCeEEEEec--C-CcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEec
Q 016446 121 QDSIYKVFDLKNYTMLYSIS--D-KHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQ 196 (389)
Q Consensus 121 ~D~tiklWdl~~g~~l~tl~--~-~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~ 196 (389)
....|+.=++.+.+....+. + ..+.+|+|. .++.|..+. -..+.|+.+++..+.....+..-......+++. +
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD--~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD-~ 89 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTD--ISLKTISRAFMNGSALEHVVEFGLDYPEGMAVD-W 89 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEECSSCSCCCEEEEE-T
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEE--CCCCeEEEEECCCCCcEEEEeCCCCCcceEEEE-e
Confidence 45788888987655444443 2 468899999 466766663 345789999986554444444222445778876 4
Q ss_pred CCCeEEEE-eCCCcEEEEECCCCeEEEEcccCCCceEEEEEcC-CCcEEEEEc--CCeEEEEeCCCcEEEEeccCcCCcC
Q 016446 197 FNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFR--NRTVAVWNFRGELVTSFEDHLLWHP 272 (389)
Q Consensus 197 ~~~~l~~~-s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fsp-dg~~laS~s--D~tIklWd~~G~~l~tl~gh~~~~~ 272 (389)
.++.|..+ ...+.|.+-++........+...-..++.+++.| +|.+..+-. .+.|...+++|.....+-....+
T Consensus 90 ~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~-- 167 (628)
T 4a0p_A 90 LGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGR-- 167 (628)
T ss_dssp TTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSS--
T ss_pred CCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCC--
Confidence 46666655 5788999999965544333345556789999998 677777763 56888888887655555433322
Q ss_pred CCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCC
Q 016446 273 DCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILT 315 (389)
Q Consensus 273 ~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~t 315 (389)
-+.|+|+|+++.|--+-. ..+.|...|+..
T Consensus 168 ---P~GlalD~~~~~LY~aD~----------~~~~I~~~d~dG 197 (628)
T 4a0p_A 168 ---ANGLTIDYAKRRLYWTDL----------DTNLIESSNMLG 197 (628)
T ss_dssp ---EEEEEEETTTTEEEEEET----------TTTEEEEEETTS
T ss_pred ---cceEEEccccCEEEEEEC----------CCCEEEEEcCCC
Confidence 489999999887776543 347899999753
No 298
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.62 E-value=0.061 Score=52.83 Aligned_cols=147 Identities=14% Similarity=0.104 Sum_probs=88.0
Q ss_pred cccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeE--EEEec------CCcEEEEEEcC----CceEEEEecCCCCee
Q 016446 99 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM--LYSIS------DKHVQEIKISP----GIMLLIFNRSSSHVP 166 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~--l~tl~------~~~V~~vafS~----g~~la~~~~~s~d~t 166 (389)
.+.+|+.++|. |||+++++--..+.|++++..+|+. +..+. ......|+|+| +..|..+-+...+..
T Consensus 30 gL~~P~~ia~~-pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 30 GLNSPWGLAPL-PGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCSSEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred CCCCceEEEEc-CCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 45678999998 9999999876689999998766764 33332 24689999996 355544322223355
Q ss_pred EEEEEcCCC----------eEE-EEEe-ecCCceeEEEEEecCCCeEEEEeC-------------CCcEEEEECCCCe--
Q 016446 167 LKILSIEDG----------TVL-KVFY-HLLHRNKKVDFIEQFNEKLLVKQE-------------NENLQILDVRNAE-- 219 (389)
Q Consensus 167 iklWd~~tG----------~~l-~tl~-~~~~~~~~v~f~~~~~~~l~~~s~-------------D~tIklWd~~tg~-- 219 (389)
|--+.+..+ +.+ ..+. ...|.-..++|. |++...++.+. -+.|.-.|.. |+
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fg-pDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d-G~ip 186 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFG-PDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD-GEPA 186 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEEC-TTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT-SSBC
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCC-CCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC-CCcc
Confidence 555655431 222 2343 223445789997 66655554331 1333333443 22
Q ss_pred -------EEEEcccCCCceEEEEEcCCCcEEEEEc--CC
Q 016446 220 -------LMEVSRTEFMTPSAFIFLYENQLFLTFR--NR 249 (389)
Q Consensus 220 -------~~~~l~gh~~~v~sv~fspdg~~laS~s--D~ 249 (389)
....-.||. -+..++|.|+|++.++-. |+
T Consensus 187 ~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~ 224 (347)
T 3das_A 187 PGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDT 224 (347)
T ss_dssp TTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSS
T ss_pred CCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCC
Confidence 111123554 356799999999888773 55
No 299
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.62 E-value=0.019 Score=60.44 Aligned_cols=207 Identities=15% Similarity=0.157 Sum_probs=132.2
Q ss_pred ccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeE-EEEec-C-CcEEEEEEcC-CceEEEEecCCCCeeEEEEEcCCC
Q 016446 100 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM-LYSIS-D-KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDG 175 (389)
Q Consensus 100 ~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~-l~tl~-~-~~V~~vafS~-g~~la~~~~~s~d~tiklWd~~tG 175 (389)
+..+..|+|++.+|.+..+-...+.|+.+++..... ...+. + .....+|+.+ ++.|..+. ...+.|.+-++. |
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d--~~~~~I~v~~~d-G 115 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTD--SETNRIEVSNLD-G 115 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEE--TTTTEEEEEETT-S
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEe--CCCCEEEEEECC-C
Confidence 445678999955777777777788999999865432 23333 2 5789999994 77777764 445799999975 5
Q ss_pred eEEEEEe-ecCCceeEEEEEecCCCeEEEEe--CCCcEEEEECCCCeEEEEcccCCCceEEEEEcCC-CcEEEEEc-CCe
Q 016446 176 TVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQ--ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYE-NQLFLTFR-NRT 250 (389)
Q Consensus 176 ~~l~tl~-~~~~~~~~v~f~~~~~~~l~~~s--~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspd-g~~laS~s-D~t 250 (389)
+..+++. .....-+.|++. |.++.|..+. ....|..-++............-.++..+++.|+ +++..+-. .+.
T Consensus 116 ~~~~~l~~~~l~~P~~Iavd-p~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~ 194 (619)
T 3s94_A 116 SLRKVLFWQELDQPRAIALD-PSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNF 194 (619)
T ss_dssp CSCEEEECSSCSCCCCEEEE-TTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCC
T ss_pred CCEEEEEeCCCCCCceEEEe-cCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCe
Confidence 5444554 344556888887 5566776664 3466777777543333333445668999999986 55555555 789
Q ss_pred EEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCC
Q 016446 251 VAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATN 326 (389)
Q Consensus 251 IklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~ 326 (389)
|...|++|.-.+++......+| ..|++.+| .+..+ .. ..+.|..-|..+|+.+..+....
T Consensus 195 I~~~~~dG~~~~~~~~~~~~~P----~gi~~~~~-~ly~t-d~----------~~~~V~~~d~~tg~~~~~i~~~~ 254 (619)
T 3s94_A 195 IHKSNLDGTNRQAVVKGSLPHP----FALTLFED-ILYWT-DW----------STHSILACNKYTGEGLREIHSDI 254 (619)
T ss_dssp EEEESSSCCEEC---------C----CCEEESSS-EEEEE-CT----------TTCSEEEEESSSCCCCEECCSCC
T ss_pred EEEecCCCCccEEEEeCCCCCc----eEEEEeCC-EEEEe-cC----------CCCEEEEEECCCCcccEEEecCC
Confidence 9999998765554432122222 57888766 44443 22 24789999988998877776543
No 300
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.59 E-value=0.036 Score=53.83 Aligned_cols=143 Identities=12% Similarity=0.112 Sum_probs=82.2
Q ss_pred cccCceeEEEecCCCe-EEEEecCCCeEEEEeCCCCeEE---EEec------CCcEEEEEEcC----CceEEEEecCC-C
Q 016446 99 SLKWPGFVEFDDVNGK-VLTYSAQDSIYKVFDLKNYTML---YSIS------DKHVQEIKISP----GIMLLIFNRSS-S 163 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~-~Las~s~D~tiklWdl~~g~~l---~tl~------~~~V~~vafS~----g~~la~~~~~s-~ 163 (389)
.+.+|..++|. |||+ ++++- ..+.|++.+. +|+.. ..+. ......|+|+| +..|..+.... .
T Consensus 16 ~l~~P~~i~~~-pdG~~l~V~e-~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~ 92 (353)
T 2g8s_A 16 KLDHPWALAFL-PDNHGMLITL-RGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGD 92 (353)
T ss_dssp EESSEEEEEEC-STTCCEEEEE-TTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECS
T ss_pred CCCCcEEEEEc-CCCCEEEEEe-CCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCC
Confidence 35578899998 8999 77764 5789999985 55432 1111 23578999996 56665553221 1
Q ss_pred ----CeeEEEEEcCCC--e--EEEE-Eee------cCCceeEEEEEecCCCeEEEEeCC--------------CcEEEEE
Q 016446 164 ----HVPLKILSIEDG--T--VLKV-FYH------LLHRNKKVDFIEQFNEKLLVKQEN--------------ENLQILD 214 (389)
Q Consensus 164 ----d~tiklWd~~tG--~--~l~t-l~~------~~~~~~~v~f~~~~~~~l~~~s~D--------------~tIklWd 214 (389)
...|..+++..+ + ..++ +.. ..|.-..++|. |++ .|..+..| +.|.-.|
T Consensus 93 ~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~-pdG-~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~ 170 (353)
T 2g8s_A 93 DGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFD-GKG-YLFIALGENNQRPTAQDLDKLQGKLVRLT 170 (353)
T ss_dssp SSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEEC-SSS-EEEEEECCTTCGGGGGCTTSCTTEEEEEE
T ss_pred CCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEEC-CCC-cEEEEECCCCCCCccCCCCCCCeEEEEEC
Confidence 235555665433 1 1122 211 11334679997 555 55554322 3565566
Q ss_pred CCCCe------------EEEEc-ccCCCceEEEEEcC-CCcEEEEEc
Q 016446 215 VRNAE------------LMEVS-RTEFMTPSAFIFLY-ENQLFLTFR 247 (389)
Q Consensus 215 ~~tg~------------~~~~l-~gh~~~v~sv~fsp-dg~~laS~s 247 (389)
....- ..+++ .||. .++.++|.| +|+++++-.
T Consensus 171 ~dG~~p~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~~d~ 216 (353)
T 2g8s_A 171 DQGEIPDDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWLNEH 216 (353)
T ss_dssp TTSCCCTTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEEEEE
T ss_pred CCCCCCCCCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEEEec
Confidence 64320 11111 2443 478899999 898888764
No 301
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.59 E-value=0.039 Score=58.19 Aligned_cols=202 Identities=9% Similarity=0.057 Sum_probs=132.2
Q ss_pred cCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec-C-CcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeE
Q 016446 101 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-D-KHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTV 177 (389)
Q Consensus 101 ~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~-~-~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~ 177 (389)
..+..|+|++.+|++..+...++.|+.+++........+. + .....+|+. .++.|..+. ...+.|.+-++.. ..
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD--~~~~~I~v~~~dG-~~ 113 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWAD--TGTNRIEVSKLDG-QH 113 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEE--TTTTEEEEEETTS-TT
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEE--CCCCEEEEEecCC-Cc
Confidence 4567899995577878888889999999985443333333 2 457889998 567776663 3447899989754 43
Q ss_pred EEEEe-ecCCceeEEEEEecCCCeEEEEe--CCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcE-EEEEc-CCeEE
Q 016446 178 LKVFY-HLLHRNKKVDFIEQFNEKLLVKQ--ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQL-FLTFR-NRTVA 252 (389)
Q Consensus 178 l~tl~-~~~~~~~~v~f~~~~~~~l~~~s--~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~-laS~s-D~tIk 252 (389)
.+++. .....-..|++. |..+.|..+. ....|...++...+. +++...-.++..+++.|+++. ..+-. .+.|.
T Consensus 114 ~~~l~~~~l~~P~~iavd-p~~G~lY~tD~g~~~~I~r~~~dG~~~-~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~ 191 (628)
T 4a0p_A 114 RQVLVWKDLDSPRALALD-PAEGFMYWTEWGGKPKIDRAAMDGSER-TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIE 191 (628)
T ss_dssp CEEEECSSCCCEEEEEEE-TTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSCSSEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEEeCCCCCcccEEEc-cCCCeEEEeCCCCCCEEEEEeCCCCce-EEEECCCCCcceEEEccccCEEEEEECCCCEEE
Confidence 44443 333445788887 5566666654 367888888854443 333345678999999997554 44445 88999
Q ss_pred EEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecC
Q 016446 253 VWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 324 (389)
Q Consensus 253 lWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~g 324 (389)
..|++|.-.+.+.+.. .+ -..+++.. +.+.++ ... .+.|..-|..+|+....|..
T Consensus 192 ~~d~dG~~~~v~~~~l-~~----P~glav~~-~~ly~t-D~~----------~~~I~~~dk~tg~~~~~l~~ 246 (628)
T 4a0p_A 192 SSNMLGLNREVIADDL-PH----PFGLTQYQ-DYIYWT-DWS----------RRSIERANKTSGQNRTIIQG 246 (628)
T ss_dssp EEETTSCSCEEEEECC-SC----EEEEEEET-TEEEEE-ETT----------TTEEEEEETTTCCSCEEEEC
T ss_pred EEcCCCCceEEeeccC-CC----ceEEEEEC-CEEEEe-cCC----------CCEEEEEECCCCCceEEEec
Confidence 9999865434454332 22 36788755 344444 322 47888888778876666654
No 302
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.20 E-value=0.042 Score=54.25 Aligned_cols=171 Identities=13% Similarity=0.195 Sum_probs=109.8
Q ss_pred eeEEEEEcCCCeEEEEEeecCCceeEEEEEec---CCCe--EEEEe--C--CCcEEEEEC--CCCeEEEEcc-----cCC
Q 016446 165 VPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQ---FNEK--LLVKQ--E--NENLQILDV--RNAELMEVSR-----TEF 228 (389)
Q Consensus 165 ~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~---~~~~--l~~~s--~--D~tIklWd~--~tg~~~~~l~-----gh~ 228 (389)
.-+.+.|+ +|+.++.++. ++.+.|..-+- .++. ++..+ . +++|+++++ .++++...-. +..
T Consensus 50 ~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~ 126 (355)
T 3amr_A 50 SGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATA 126 (355)
T ss_dssp TEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECC
T ss_pred CCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCC
Confidence 46899998 8999999974 66777777531 1222 44443 4 689999966 5666433311 122
Q ss_pred -CceEEEEE--cCC-Cc-EEEEEc-CCeEEEEeC--------CCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecC
Q 016446 229 -MTPSAFIF--LYE-NQ-LFLTFR-NRTVAVWNF--------RGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKA 294 (389)
Q Consensus 229 -~~v~sv~f--spd-g~-~laS~s-D~tIklWd~--------~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D 294 (389)
..++.+++ +|. |+ ++.... ++.+..|++ +++++++|.--.. +..+++.|...+|..+-+|
T Consensus 127 ~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq------~EgcvvDd~~g~Lyv~eEd 200 (355)
T 3amr_A 127 INEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQ------TEGMAADDEYGRLYIAEED 200 (355)
T ss_dssp CSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSC------EEEEEEETTTTEEEEEETT
T ss_pred CCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCC------cceEEEcCCCCeEEEeccc
Confidence 56778888 774 54 333344 999999987 1367888874322 6788899988888877554
Q ss_pred CCcccccCCCCCeEEEEeCC-----CCeEEEEec-CCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEE
Q 016446 295 EPEDQWMEGSAGSINVSSIL-----TGKCLAKIN-ATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFY 368 (389)
Q Consensus 295 ~~~~~~~~s~D~tIklWd~~-----tg~~l~tl~-gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svaf 368 (389)
.-|.-.|.. +++.+..+. +|- ...|..|++
T Consensus 201 -----------~GIw~~da~p~~~~~~~~v~~~~~g~l---------------------------------~aDvEGLai 236 (355)
T 3amr_A 201 -----------EAIWKFSAEPDGGSNGTVIDRADGRHL---------------------------------TRDIEGLTI 236 (355)
T ss_dssp -----------TEEEEEECSTTSCSCCEEEEEBSSSSB---------------------------------CSCEEEEEE
T ss_pred -----------ceEEEEeCCcCCCCCceEEEEecCCcc---------------------------------ccCcceEEE
Confidence 345555543 455665553 221 036788888
Q ss_pred --CCCCC-EEEEec-CCCcEEEcc
Q 016446 369 --DEERN-EIYTGN-RHGLVHVWS 388 (389)
Q Consensus 369 --Spdg~-~LaSgs-~D~tIrlW~ 388 (389)
.++|+ +|+..| .+.+..++|
T Consensus 237 ~~~~~g~gyLivSsQG~~s~~Vyd 260 (355)
T 3amr_A 237 YYAADGKGYLMASSQGNSSYAIYD 260 (355)
T ss_dssp EECGGGCEEEEEEEGGGTEEEEEE
T ss_pred EecCCCCEEEEEEcCCCCEEEEEE
Confidence 67777 455555 677888876
No 303
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.18 E-value=0.042 Score=53.28 Aligned_cols=138 Identities=10% Similarity=0.030 Sum_probs=80.5
Q ss_pred CcEEEEEEcCCceEEEEecCCCCeeEEEEEcCCCeEE--EEEe---ecCCceeEEEEEecC---CCeEEEEe-CC-----
Q 016446 142 KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVL--KVFY---HLLHRNKKVDFIEQF---NEKLLVKQ-EN----- 207 (389)
Q Consensus 142 ~~V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~l--~tl~---~~~~~~~~v~f~~~~---~~~l~~~s-~D----- 207 (389)
..-++++|.|+..|.++... +.|++++ +|+.. ..+. .....-..|+|. |+ ++.+.++. .+
T Consensus 31 ~~P~~ia~~pdG~l~V~e~~---g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~-pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAERP---GRIRLFR--EGRLSTYAELSVYHRGESGLLGLALH-PRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp SCEEEEEECTTSCEEEEETT---TEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEEC-TTTTTSCEEEEEEEECTTSSE
T ss_pred CCceEEEEcCCCeEEEEeCC---CeEEEEE--CCCccEeecceEeecCCCCceeEEEC-CCCCCCCEEEEEEecCCCCCc
Confidence 35679999954345455433 6888888 56532 1111 112455889987 55 45666543 22
Q ss_pred CcEEEEECCCCe------EEEEcc---cCCCceEEEEEcCCCcEEEEEcC--------------CeEEEEeCCCcE----
Q 016446 208 ENLQILDVRNAE------LMEVSR---TEFMTPSAFIFLYENQLFLTFRN--------------RTVAVWNFRGEL---- 260 (389)
Q Consensus 208 ~tIklWd~~tg~------~~~~l~---gh~~~v~sv~fspdg~~laS~sD--------------~tIklWd~~G~~---- 260 (389)
..|..++...+. .+..+. +.......++|.|||.+.++-+| +.|.-.+.+|+.
T Consensus 105 ~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~n 184 (352)
T 2ism_A 105 NQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGN 184 (352)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTC
T ss_pred cEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCC
Confidence 678888876542 222233 22234578999999999888642 344444445621
Q ss_pred ---------EE-EeccCcCCcCCCCeeEEEECC-CCCEEEEE
Q 016446 261 ---------VT-SFEDHLLWHPDCNTNNIYITS-DQDLIISY 291 (389)
Q Consensus 261 ---------l~-tl~gh~~~~~~~~v~sv~fSp-dG~~laS~ 291 (389)
.. --.||..+ +.++|+| +|++.++-
T Consensus 185 pf~~~~~~~~~i~a~G~rnp------~g~a~d~~~g~l~v~d 220 (352)
T 2ism_A 185 PFLGRRGARPEVYSLGHRNP------QGLAWHPKTGELFSSE 220 (352)
T ss_dssp TTTTCTTSCTTEEEECCSEE------CCCEECTTTCCEEEEE
T ss_pred cccCCCCCCccEEEEcCCCc------ccEEEECCCCCEEEEE
Confidence 11 11244443 6899999 78877764
No 304
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.15 E-value=0.068 Score=52.04 Aligned_cols=138 Identities=11% Similarity=0.011 Sum_probs=82.2
Q ss_pred CcEEEEEEcCCceEEEEecCCCCeeEEEEEcCCCe-EEEEEe---ecCCceeEEEEEecC---CCeEEEEeC----C---
Q 016446 142 KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGT-VLKVFY---HLLHRNKKVDFIEQF---NEKLLVKQE----N--- 207 (389)
Q Consensus 142 ~~V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~-~l~tl~---~~~~~~~~v~f~~~~---~~~l~~~s~----D--- 207 (389)
..-++++|.|+..|.++... +.|++++ .+|+ .+..+. ........|+|. |+ ++.|.+... +
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~---g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~-pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERP---GRLVLIS-PSGKKLVASFDVANVGEAGLLGLALH-PEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEETTEEEEEETT---TEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEEC-TTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcCCCeEEEEeCC---CEEEEEe-CCCceEeeccceeecCCCceeeEEeC-CCCCcCCEEEEEEeccCCCCCc
Confidence 45789999954445555433 6888887 5776 222221 112456889987 54 456665432 3
Q ss_pred -CcEEEEECCCC-------e-EEEEcc-cCCCceEEEEEcCCCcEEEEEcC--------------CeEEEEeCCCc----
Q 016446 208 -ENLQILDVRNA-------E-LMEVSR-TEFMTPSAFIFLYENQLFLTFRN--------------RTVAVWNFRGE---- 259 (389)
Q Consensus 208 -~tIklWd~~tg-------~-~~~~l~-gh~~~v~sv~fspdg~~laS~sD--------------~tIklWd~~G~---- 259 (389)
..|..++...+ + ++..+. +.......++|.|||.+.++.+| +.|.-.+.+|+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 56777777654 1 112122 22234577999999999988643 34444444564
Q ss_pred ------EEEEeccCcCCcCCCCeeEEEECC-CCCEEEEE
Q 016446 260 ------LVTSFEDHLLWHPDCNTNNIYITS-DQDLIISY 291 (389)
Q Consensus 260 ------~l~tl~gh~~~~~~~~v~sv~fSp-dG~~laS~ 291 (389)
.+. -.||..+ +.++|+| +|++.++-
T Consensus 184 npf~~~~i~-a~G~rnp------~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 184 NPFPNSPIW-SYGHRNP------QGIDWHRASGVMVATE 215 (354)
T ss_dssp SSSTTCCEE-EECCSCC------CEEEECTTTCCEEEEE
T ss_pred CCCCCCcEE-EEccCCc------ceEEEeCCCCCEEEEe
Confidence 122 2356554 7999999 78877764
No 305
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.72 E-value=0.11 Score=52.64 Aligned_cols=60 Identities=7% Similarity=0.145 Sum_probs=42.4
Q ss_pred cccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeE--EEEec--------CCcEEEEEEcC----CceEEEEe
Q 016446 99 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM--LYSIS--------DKHVQEIKISP----GIMLLIFN 159 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~--l~tl~--------~~~V~~vafS~----g~~la~~~ 159 (389)
.+.+|+.++|. |||+++++--..+.|++.+..+|+. +..+. ......|+|+| +..|..+.
T Consensus 25 ~l~~P~~~a~~-pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 25 NLNKPHALLWG-PDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp CCSSEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCCceEEEEc-CCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 45688899998 9999999765555788888766663 33442 24577999996 66665543
No 306
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.63 E-value=0.49 Score=46.42 Aligned_cols=139 Identities=12% Similarity=0.105 Sum_probs=83.0
Q ss_pred CCeeEEEEEcCC--CeEE-EEEee-----cCCceeEEEEEec-CCC-eEEEE-e--CCCcEEEEECCCC--e--EEEEcc
Q 016446 163 SHVPLKILSIED--GTVL-KVFYH-----LLHRNKKVDFIEQ-FNE-KLLVK-Q--ENENLQILDVRNA--E--LMEVSR 225 (389)
Q Consensus 163 ~d~tiklWd~~t--G~~l-~tl~~-----~~~~~~~v~f~~~-~~~-~l~~~-s--~D~tIklWd~~tg--~--~~~~l~ 225 (389)
.++.|-++|..+ ++.. ..+++ ..-+-..+.+.+. ++. +|.+. . .+.+|.||++..+ . .+.++.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 356788888763 3321 12222 1113355555431 332 45443 2 4789999887643 2 244444
Q ss_pred cC-CCceEEEEEcCCCcEEEEEc----C------------CeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCE
Q 016446 226 TE-FMTPSAFIFLYENQLFLTFR----N------------RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDL 287 (389)
Q Consensus 226 gh-~~~v~sv~fspdg~~laS~s----D------------~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~ 287 (389)
+. ...++.+++.|+|++.++.. | .+=+||-++ +++...+.+-.. -+.++|||||++
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~~l~~------pNGia~spDg~~ 234 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDF------ANGINISPDGKY 234 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEEEESS------EEEEEECTTSSE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEeecCCcc------cCcceECCCCCE
Confidence 43 34689999999999888753 2 234667665 554433333222 389999999998
Q ss_pred EEEEecCCCcccccCCCCCeEEEEeCC-CCe
Q 016446 288 IISYCKAEPEDQWMEGSAGSINVSSIL-TGK 317 (389)
Q Consensus 288 laS~s~D~~~~~~~~s~D~tIklWd~~-tg~ 317 (389)
|..+... .+.|..+|+. +|+
T Consensus 235 lYvadt~----------~~~I~~~~~~~~g~ 255 (355)
T 3sre_A 235 VYIAELL----------AHKIHVYEKHANWT 255 (355)
T ss_dssp EEEEEGG----------GTEEEEEEECTTSC
T ss_pred EEEEeCC----------CCeEEEEEECCCCc
Confidence 8766432 4789999985 344
No 307
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.61 E-value=0.55 Score=46.11 Aligned_cols=183 Identities=13% Similarity=0.098 Sum_probs=109.9
Q ss_pred CceeEEEecCCCeEEEEec------------CCCeEEEEeCCC--CeE-EEEecC-------CcEEEEEEc---CCc-eE
Q 016446 102 WPGFVEFDDVNGKVLTYSA------------QDSIYKVFDLKN--YTM-LYSISD-------KHVQEIKIS---PGI-ML 155 (389)
Q Consensus 102 ~~~~v~Fs~pdG~~Las~s------------~D~tiklWdl~~--g~~-l~tl~~-------~~V~~vafS---~g~-~l 155 (389)
.+..++.. |+|..+++++ .+|.|-++|+++ ++. ...+.+ -.-..+.+. +|. +|
T Consensus 51 G~EDi~~~-~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEIL-PNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEEC-TTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEc-CCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 45678887 7998877763 689999999873 332 122222 245666664 343 45
Q ss_pred EEEecCCCCeeEEEEEcCCC-e---EEEEEeec-CCceeEEEEEecCCCeEEEEe---CC------------CcEEEEEC
Q 016446 156 LIFNRSSSHVPLKILSIEDG-T---VLKVFYHL-LHRNKKVDFIEQFNEKLLVKQ---EN------------ENLQILDV 215 (389)
Q Consensus 156 a~~~~~s~d~tiklWd~~tG-~---~l~tl~~~-~~~~~~v~f~~~~~~~l~~~s---~D------------~tIklWd~ 215 (389)
.+......+.+|.||++..+ . .+.++.+. ....+.+.+. +++...++.. .| .+=+||-+
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~-~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~ 208 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAV-GPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 208 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEE-ETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEe-CCCCEEecCCcEeCCcccccchhhccCCccEEEEE
Confidence 55555545679999887653 2 23344421 1234788886 4444444332 11 23455555
Q ss_pred CCCeEEEEcccCCCceEEEEEcCCCcEEEEE-c-CCeEEEEeCC--CcE--EEEeccCcCCcCCCCeeEEEECC-CCCEE
Q 016446 216 RNAELMEVSRTEFMTPSAFIFLYENQLFLTF-R-NRTVAVWNFR--GEL--VTSFEDHLLWHPDCNTNNIYITS-DQDLI 288 (389)
Q Consensus 216 ~tg~~~~~l~gh~~~v~sv~fspdg~~laS~-s-D~tIklWd~~--G~~--l~tl~gh~~~~~~~~v~sv~fSp-dG~~l 288 (389)
..+++... ...-...+.++|||||+.|.-+ + .+.|..++++ |++ .+.+. ... .--.+++.+ +|.+.
T Consensus 209 d~~~~~~~-~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~--~~g----~PDGi~vD~e~G~lw 281 (355)
T 3sre_A 209 SPNDVRVV-AEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS--FDT----LVDNISVDPVTGDLW 281 (355)
T ss_dssp CTTCCEEE-EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE--CSS----EEEEEEECTTTCCEE
T ss_pred ECCeEEEe-ecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe--CCC----CCceEEEeCCCCcEE
Confidence 44554433 3344578999999999766555 5 8899999985 654 23442 111 136799999 59998
Q ss_pred EEEec
Q 016446 289 ISYCK 293 (389)
Q Consensus 289 aS~s~ 293 (389)
+++..
T Consensus 282 va~~~ 286 (355)
T 3sre_A 282 VGCHP 286 (355)
T ss_dssp EEEES
T ss_pred EEecC
Confidence 87643
No 308
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.45 E-value=0.37 Score=47.09 Aligned_cols=169 Identities=9% Similarity=0.120 Sum_probs=97.3
Q ss_pred CceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEE-EecC--------CcEEEEEE---c-CCceEEEEecCCCCeeEE
Q 016446 102 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY-SISD--------KHVQEIKI---S-PGIMLLIFNRSSSHVPLK 168 (389)
Q Consensus 102 ~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~-tl~~--------~~V~~vaf---S-~g~~la~~~~~s~d~tik 168 (389)
+|.+++|++.+|++++|.-..++|-.||...+.... .+.+ ..+..|.+ - +|.++++.....
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~------ 87 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK------ 87 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT------
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc------
Confidence 567899985689999988899999999987564322 2222 02456666 2 333333221000
Q ss_pred EEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECC---CCeEEEE--ccc-----------CCCceE
Q 016446 169 ILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVR---NAELMEV--SRT-----------EFMTPS 232 (389)
Q Consensus 169 lWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~---tg~~~~~--l~g-----------h~~~v~ 232 (389)
+|... +.. -+.+.-+..+|+. +|+.+.. |.+ -.....
T Consensus 88 -----------------------af~~~-g~~---~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~n 140 (334)
T 2p9w_A 88 -----------------------SFNFA-DQS---SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVV 140 (334)
T ss_dssp -----------------------TTCTT-SCC---SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEE
T ss_pred -----------------------ccccc-ccc---cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCc
Confidence 00000 000 0124445555555 4544322 111 112477
Q ss_pred EEEEcCCCcEEEEEc-C-CeEEEEeCCCcEEEEecc-CcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEE
Q 016446 233 AFIFLYENQLFLTFR-N-RTVAVWNFRGELVTSFED-HLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSIN 309 (389)
Q Consensus 233 sv~fspdg~~laS~s-D-~tIklWd~~G~~l~tl~g-h~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIk 309 (389)
.++.-++|+.-++++ - +.|-..+.+|+.+..+-- .......+..+.++++|||++|+... + .+.+.
T Consensus 141 DvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~----------~-~g~L~ 209 (334)
T 2p9w_A 141 QSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFG----------G-PRALT 209 (334)
T ss_dssp EEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEES----------S-SSSEE
T ss_pred eeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEc----------C-CCeEE
Confidence 888999999988888 6 776666666775544321 11111112357999999999988763 2 57888
Q ss_pred EEeCC
Q 016446 310 VSSIL 314 (389)
Q Consensus 310 lWd~~ 314 (389)
-.|+.
T Consensus 210 ~fD~~ 214 (334)
T 2p9w_A 210 AFDVS 214 (334)
T ss_dssp EEECS
T ss_pred EEcCC
Confidence 88876
No 309
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.45 E-value=0.28 Score=48.00 Aligned_cols=157 Identities=10% Similarity=0.112 Sum_probs=96.2
Q ss_pred eEEEEEecCCCeEEEEe-CCCcEEEEECCCCeEEEE-ccc----C--CCceEEEEE---cCCCcEEEEEc----------
Q 016446 189 KKVDFIEQFNEKLLVKQ-ENENLQILDVRNAELMEV-SRT----E--FMTPSAFIF---LYENQLFLTFR---------- 247 (389)
Q Consensus 189 ~~v~f~~~~~~~l~~~s-~D~tIklWd~~tg~~~~~-l~g----h--~~~v~sv~f---spdg~~laS~s---------- 247 (389)
..++|. +..+.+..++ ..++|-.||...+....+ +.+ . ...+..+.+ -|+|++++...
T Consensus 16 E~~~wd-~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 16 EDTIYD-RTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp SCEEEE-TTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred cCccCc-CCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 345554 3356777776 899999999987755444 322 1 124688999 58899998532
Q ss_pred ----CCeEEEEeCC----CcEEE--EeccCcCC-------cCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEE
Q 016446 248 ----NRTVAVWNFR----GELVT--SFEDHLLW-------HPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINV 310 (389)
Q Consensus 248 ----D~tIklWd~~----G~~l~--tl~gh~~~-------~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIkl 310 (389)
+..+..+|+. |+.+. .|.+.... .. ...+.+++.|+|+.-++++.. - +.|-.
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~-~~~nDvavD~~GnaYVt~s~~---------~-~~I~r 163 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRP-FGVVQSAQDRDGNSYVAFALG---------M-PAIAR 163 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCC-EEEEEEEECTTSCEEEEEEES---------S-CEEEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccc-cCCceeEECCCCCEEEeCCCC---------C-CeEEE
Confidence 5778899987 77653 33322110 00 015899999999999998752 0 35555
Q ss_pred EeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecCCCcEEE
Q 016446 311 SSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNRHGLVHV 386 (389)
Q Consensus 311 Wd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~D~tIrl 386 (389)
.| ..|+.+..+.-... + . ...-..+.++|+|||++|+....++.+--
T Consensus 164 V~-pdG~~~~~~~~~~~--~---------~-----------------~~~~G~nGIv~~pdg~~Liv~~~~g~L~~ 210 (334)
T 2p9w_A 164 VS-ADGKTVSTFAWESG--N---------G-----------------GQRPGYSGITFDPHSNKLIAFGGPRALTA 210 (334)
T ss_dssp EC-TTSCCEEEEEECCC--C---------S-----------------SSCCSCSEEEEETTTTEEEEESSSSSEEE
T ss_pred Ee-CCCCEEeeeeecCC--C---------c-----------------ccccCcceEEEeCCCCEEEEEcCCCeEEE
Confidence 55 33554443321110 0 0 00024567899999998888876776543
No 310
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.38 E-value=0.078 Score=52.09 Aligned_cols=72 Identities=13% Similarity=0.150 Sum_probs=48.7
Q ss_pred EEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEEEeCC-CcE--EEEeccCcCCcCCCCeeEEEECCC----CCEEEEEe
Q 016446 221 MEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GEL--VTSFEDHLLWHPDCNTNNIYITSD----QDLIISYC 292 (389)
Q Consensus 221 ~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIklWd~~-G~~--l~tl~gh~~~~~~~~v~sv~fSpd----G~~laS~s 292 (389)
++++...-...+.++|.|||+++++-. .|.|++.+.+ |+. +..+.. ...........|+|+|| |.+.++++
T Consensus 24 ~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~-v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 24 LRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPG-VSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTT-CCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred eEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCc-eeecCCCCceeeEeccccccCCEEEEEEe
Confidence 444555566889999999999999998 9999999875 653 222210 00000112589999995 77777765
Q ss_pred c
Q 016446 293 K 293 (389)
Q Consensus 293 ~ 293 (389)
.
T Consensus 103 ~ 103 (347)
T 3das_A 103 S 103 (347)
T ss_dssp C
T ss_pred c
Confidence 3
No 311
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.96 E-value=0.75 Score=42.23 Aligned_cols=192 Identities=9% Similarity=0.005 Sum_probs=99.3
Q ss_pred CCeEEEEec-CC-----CeEEEEeCCCCeEE--EEecCC-cEEEEEEcCCceEEEEecCCC--CeeEEEEEcCCCe----
Q 016446 112 NGKVLTYSA-QD-----SIYKVFDLKNYTML--YSISDK-HVQEIKISPGIMLLIFNRSSS--HVPLKILSIEDGT---- 176 (389)
Q Consensus 112 dG~~Las~s-~D-----~tiklWdl~~g~~l--~tl~~~-~V~~vafS~g~~la~~~~~s~--d~tiklWd~~tG~---- 176 (389)
++++++.|+ .+ ..+..+|+.+.+-. ..++.. .-.+++..++.+++.+...+. -..+.++|+.+++
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCee
Confidence 466666666 32 36778888777622 222221 112233335666665543211 1468899988865
Q ss_pred -EEEEEeecCCce-eEEEEEecCCCeEEEEeCC-----CcEEEEECCCCeEEEEc--ccCCCceEEEEEcCCCcEEEEEc
Q 016446 177 -VLKVFYHLLHRN-KKVDFIEQFNEKLLVKQEN-----ENLQILDVRNAELMEVS--RTEFMTPSAFIFLYENQLFLTFR 247 (389)
Q Consensus 177 -~l~tl~~~~~~~-~~v~f~~~~~~~l~~~s~D-----~tIklWd~~tg~~~~~l--~gh~~~v~sv~fspdg~~laS~s 247 (389)
.+..++ ..+. ..+.. .++..++.|+.+ ..+.++|+.+.+-.+.- ......-..+ ..++++++-|+
T Consensus 94 ~~~~~~p--~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG 167 (301)
T 2vpj_A 94 YSVAPMN--VRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLV--VASGVIYCLGG 167 (301)
T ss_dssp EEECCCS--SCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEE--EETTEEEEECC
T ss_pred EECCCCC--CCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEE--EECCEEEEECC
Confidence 232222 1222 22222 234555556533 46889999887754432 1111111222 23788888775
Q ss_pred -C-----CeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEE
Q 016446 248 -N-----RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCL 319 (389)
Q Consensus 248 -D-----~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l 319 (389)
+ ..+..+|.....-..+..-..+ -..-..+. -++++++.|+.+. ...-..|.++|+.+.+-.
T Consensus 168 ~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~~~~--~~~~i~v~GG~~~------~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 168 YDGLNILNSVEKYDPHTGHWTNVTPMATK--RSGAGVAL--LNDHIYVVGGFDG------TAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp BCSSCBCCCEEEEETTTTEEEEECCCSSC--CBSCEEEE--ETTEEEEECCBCS------SSBCCCEEEEETTTTEEE
T ss_pred CCCCcccceEEEEeCCCCcEEeCCCCCcc--cccceEEE--ECCEEEEEeCCCC------CcccceEEEEeCCCCcEE
Confidence 4 4688889863333333211111 01112233 3788888887652 111357899999887653
No 312
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.82 E-value=0.28 Score=49.51 Aligned_cols=73 Identities=18% Similarity=0.143 Sum_probs=46.8
Q ss_pred EEEcccCCCceEEEEEcCCCcEEEEEcC-CeEEEEeCC-CcE--EEEeccCcC-CcCCCCeeEEEECC----CCCEEEEE
Q 016446 221 MEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFR-GEL--VTSFEDHLL-WHPDCNTNNIYITS----DQDLIISY 291 (389)
Q Consensus 221 ~~~l~gh~~~v~sv~fspdg~~laS~sD-~tIklWd~~-G~~--l~tl~gh~~-~~~~~~v~sv~fSp----dG~~laS~ 291 (389)
++++...-...+.++|.|||+++++-.. +.|++.+.. |+. +..+..-.. ..-......|+|+| +|.+.++.
T Consensus 19 ~~~~a~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 19 KKVILSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp EEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred EEEEECCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 3444344457899999999999999885 578888875 653 333432100 00012257999999 67777776
Q ss_pred ec
Q 016446 292 CK 293 (389)
Q Consensus 292 s~ 293 (389)
+.
T Consensus 99 s~ 100 (454)
T 1cru_A 99 TF 100 (454)
T ss_dssp EE
T ss_pred ec
Confidence 53
No 313
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.55 E-value=0.32 Score=49.44 Aligned_cols=75 Identities=12% Similarity=0.170 Sum_probs=48.3
Q ss_pred EEEEcccCCCceEEEEEcCCCc--EEEEEcCCeEEEEeCCCcE----EEEeccCcCC----cCCCCeeEEEECCC----C
Q 016446 220 LMEVSRTEFMTPSAFIFLYENQ--LFLTFRNRTVAVWNFRGEL----VTSFEDHLLW----HPDCNTNNIYITSD----Q 285 (389)
Q Consensus 220 ~~~~l~gh~~~v~sv~fspdg~--~laS~sD~tIklWd~~G~~----l~tl~gh~~~----~~~~~v~sv~fSpd----G 285 (389)
+++++...-...++++|.|||+ +|++-..|.|++++.+|.. +..+..-... .....+..|+|+|| |
T Consensus 5 ~v~~va~gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~ 84 (463)
T 2wg3_C 5 CIQEVVSGLRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNG 84 (463)
T ss_dssp EEEEEEEEESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHC
T ss_pred EEEEeccCCCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCC
Confidence 3344443445789999999995 8888779999999876542 2222210000 00113688999997 8
Q ss_pred CEEEEEecC
Q 016446 286 DLIISYCKA 294 (389)
Q Consensus 286 ~~laS~s~D 294 (389)
.+.++++.+
T Consensus 85 ~lYv~yt~~ 93 (463)
T 2wg3_C 85 KLYVSYTTN 93 (463)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEeCC
Confidence 888888753
No 314
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.17 E-value=2.2 Score=40.42 Aligned_cols=224 Identities=11% Similarity=0.049 Sum_probs=120.8
Q ss_pred eeccEEEEEec--CceEEEEecccceeeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCccee-----eeeeeEeEe
Q 016446 11 AARDIVFALAH--SGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLK-----CRSTKIEYI 83 (389)
Q Consensus 11 ~~~~~~a~~~~--~gtiklW~~~tg~~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~-----~~~~~l~~i 83 (389)
+.++.|.-... ++.+-..+.+ |.....|.. +. +-.++|+|+.|.-+....+.+ ..+. -+.++..++
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~d-g~~~~~l~~---~~--~~~i~~~g~~Iyy~~~~~~~~-~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNID-GSNIHKLSN---DT--AMYINADKNYVYYVRNNNQKI-TSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETT-SCSCEEEEE---EE--EEEEEECSSEEEEEEECC-------CCSSCCSEEEEEEET
T ss_pred EeCCEEEEEeCCCCceEEEEcCC-CCCCEEccC---Cc--eeeEEEcCCEEEEEECCCCcc-cccceeccCCCeEEEEeC
Confidence 34555555542 3444444443 655555553 22 357799999999875422111 0000 134444443
Q ss_pred ccCCCCCcceeEeeecccCceeEEEecCCCeEEEEec--CCCeEEEEeCC-CCeEEEEecCCcEEEEEEc-CCceEEEEe
Q 016446 84 RRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA--QDSIYKVFDLK-NYTMLYSISDKHVQEIKIS-PGIMLLIFN 159 (389)
Q Consensus 84 ~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s--~D~tiklWdl~-~g~~l~tl~~~~V~~vafS-~g~~la~~~ 159 (389)
..++ ...| . .-...+|+ |+|+.|+-.. .++.-+|+-+. +|.....+..+.+ .+|+ +|+.|.-++
T Consensus 96 dg~~---~~~l-~-----~~~~~~~s-~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~--~~~~~~g~~iy~t~ 163 (302)
T 3s25_A 96 NGHG---STVL-D-----PDPCIYAS-LIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL--FTCNTSDRYFYYNN 163 (302)
T ss_dssp TSCC---CEEE-E-----CSCEEEEE-EETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC--CCSEEETTEEEEEC
T ss_pred CCCc---ceEe-e-----cCCccEEE-EeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc--eEeeEECCEEEEEe
Confidence 3332 1222 1 11234787 7888888765 34444444432 4554455554433 5667 588887664
Q ss_pred cCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCC--CcEEEEECCCCeEEEEcccCCCceEEEEEc
Q 016446 160 RSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQEN--ENLQILDVRNAELMEVSRTEFMTPSAFIFL 237 (389)
Q Consensus 160 ~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D--~tIklWd~~tg~~~~~l~gh~~~v~sv~fs 237 (389)
. ...+|..-++.++...+.+. +... ..+. |+++.|.-...+ ..|..=++..++ .+.|.... + -.|+
T Consensus 164 ~--g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~-P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~~~--~--~~~~ 231 (302)
T 3s25_A 164 P--KNGQLYRYDTASQSEALFYD---CNCY-KPVV-LDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTEAN--I--EHYN 231 (302)
T ss_dssp T--TTCCEEEEETTTTEEEEEEC---SCEE-EEEE-EETTEEEEEEGGGTTEEEEECSSSCC-CEECSCSC--E--EEEE
T ss_pred C--CCceEEEEECCCCCEEEEeC---CCcc-ceee-ecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeCCC--c--ceEE
Confidence 3 45788888887766544443 2232 2355 778888877533 456666776555 34444322 2 2388
Q ss_pred CCCcEEEEEc---CCeEEEEeCCCcEEEEec
Q 016446 238 YENQLFLTFR---NRTVAVWNFRGELVTSFE 265 (389)
Q Consensus 238 pdg~~laS~s---D~tIklWd~~G~~l~tl~ 265 (389)
|+|+.|.-++ ...|..=+++|.-.+.|.
T Consensus 232 ~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~ 262 (302)
T 3s25_A 232 VYGSLIFYQRGGDNPALCVVKNDGTGFKELA 262 (302)
T ss_dssp EETTEEEEEECSSSCEEEEEETTSCCCEEEE
T ss_pred ECCCEEEEEECCCCcEEEEEECCCCccEEee
Confidence 8998887553 345555566776545554
No 315
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.87 E-value=2.7 Score=42.52 Aligned_cols=142 Identities=15% Similarity=0.222 Sum_probs=87.3
Q ss_pred CCCcEEEEECCCCeEEEEcccC----CCceEEEEEcCCCcEEEEEcCCeEEEEeCC-Cc------------EEEEeccCc
Q 016446 206 ENENLQILDVRNAELMEVSRTE----FMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GE------------LVTSFEDHL 268 (389)
Q Consensus 206 ~D~tIklWd~~tg~~~~~l~gh----~~~v~sv~fspdg~~laS~sD~tIklWd~~-G~------------~l~tl~gh~ 268 (389)
.++.||.=++..+.--+.|+-- ...+..+..||+|++||-.++.+|.|=.+- +. ..+++.=..
T Consensus 39 ~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~ 118 (452)
T 3pbp_A 39 QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDE 118 (452)
T ss_dssp ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGG
T ss_pred ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCC
Confidence 3477777777644334443332 336788999999999999999999998874 32 122332110
Q ss_pred CCc-CCCCeeEEEECCC---CCEEEEEecCCCcccccCCCCCeEEEEeCCCCe--EEEEecCCCCCCCcccccCCCCCCC
Q 016446 269 LWH-PDCNTNNIYITSD---QDLIISYCKAEPEDQWMEGSAGSINVSSILTGK--CLAKINATNCSPKVDDELGSSSTGK 342 (389)
Q Consensus 269 ~~~-~~~~v~sv~fSpd---G~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~--~l~tl~gH~~~~~~~~~~~~~~~~~ 342 (389)
..+ +...|..|.|+|- |..|+.=-. |++||+||+.... .. +|+-... .++.+.
T Consensus 119 ~~~~~~s~I~qVlWHPl~~~ds~LVVLts-----------D~~Ir~yDl~~s~~~P~-~L~k~~~------~fg~d~--- 177 (452)
T 3pbp_A 119 EEVGPKSSIKKVLFHPKSYRDSCIVVLKE-----------DDTITMFDILNSQEKPI-VLNKPNN------SFGLDA--- 177 (452)
T ss_dssp CC--CCCCEEEEEECTTBGGGCEEEEEET-----------TSCEEEEETTCTTSCCE-EESCCCS------EEESCS---
T ss_pred cccCCCCceeEEEeccccCCCCeEEEEec-----------CCEEEEEEcccCCCCCc-chhcccc------ccCCCc---
Confidence 000 0012899999995 445665444 5899999997522 22 4542110 000000
Q ss_pred ccccccccceecccccccCCEEEEEECCCCCEEEEec--CCCcE
Q 016446 343 SKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGN--RHGLV 384 (389)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs--~D~tI 384 (389)
....|.+++|+++|=+|+..+ +.|-|
T Consensus 178 ----------------~~~ev~S~~Fg~~~lTLYvl~~t~~GDI 205 (452)
T 3pbp_A 178 ----------------RVNDITDLEFSKDGLTLYCLNTTEGGDI 205 (452)
T ss_dssp ----------------SCCCEEEEEECTTSSCEEEEECTTSCEE
T ss_pred ----------------ccceEEEEEEcCCCcEEEEEecCCCCCE
Confidence 014789999999999999855 77776
No 316
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.09 E-value=8.7 Score=43.33 Aligned_cols=145 Identities=10% Similarity=0.033 Sum_probs=86.6
Q ss_pred EEEecCCCeEEEEec----------CCCeEEEEeCCCCeEEEEec---CCcEEEEEEcCCceEEEEecCCCCeeEEEEEc
Q 016446 106 VEFDDVNGKVLTYSA----------QDSIYKVFDLKNYTMLYSIS---DKHVQEIKISPGIMLLIFNRSSSHVPLKILSI 172 (389)
Q Consensus 106 v~Fs~pdG~~Las~s----------~D~tiklWdl~~g~~l~tl~---~~~V~~vafS~g~~la~~~~~s~d~tiklWd~ 172 (389)
+.|......+|+-|. ..|-|.+.++.++++....+ .+.|.+++-=.|..| ++. + ++|++|++
T Consensus 837 v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Ll-a~i-g---~~l~vy~l 911 (1158)
T 3ei3_A 837 CKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLL-ASI-N---STVRLYEW 911 (1158)
T ss_dssp ECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEE-EEE-T---TEEEEEEE
T ss_pred EEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEE-EEc-C---CEEEEEEC
Confidence 566422246777654 34678899887555322222 467888764456544 442 2 58999999
Q ss_pred CCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEE--EECCCCeEEEEcc-cCCCceEEEEEcCCCcEEEEEcCC
Q 016446 173 EDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQI--LDVRNAELMEVSR-TEFMTPSAFIFLYENQLFLTFRNR 249 (389)
Q Consensus 173 ~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIkl--Wd~~tg~~~~~l~-gh~~~v~sv~fspdg~~laS~sD~ 249 (389)
...+.|+.-..+..++..+... ..++++++|-.-+.|.+ |+...+++...-+ -+..++.++.|..+..++++-.+|
T Consensus 912 ~~~~~L~~~~~~~~~i~~~~l~-~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~g 990 (1158)
T 3ei3_A 912 TTEKELRTECNHYNNIMALYLK-TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAF 990 (1158)
T ss_dssp CTTSCEEEEEEECCCSCEEEEE-EETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETTEEEEEETTS
T ss_pred CCCceEEEEeeccccEEEEEEe-ccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccCcEEEEcCCC
Confidence 8766565211112223322222 23788888875555554 5665666555433 356689999999887666544588
Q ss_pred eEEEEeC
Q 016446 250 TVAVWNF 256 (389)
Q Consensus 250 tIklWd~ 256 (389)
.|.+...
T Consensus 991 Nl~vl~~ 997 (1158)
T 3ei3_A 991 NLFVCQK 997 (1158)
T ss_dssp EEEEEEE
T ss_pred cEEEEec
Confidence 8887764
No 317
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=93.99 E-value=3.6 Score=37.62 Aligned_cols=193 Identities=12% Similarity=0.067 Sum_probs=102.3
Q ss_pred CCeEEEEecCC-----CeEEEEeCCCCeE--EEEecCC-cEEEEEEcCCceEEEEecCCCC--eeEEEEEcCCCeEEEEE
Q 016446 112 NGKVLTYSAQD-----SIYKVFDLKNYTM--LYSISDK-HVQEIKISPGIMLLIFNRSSSH--VPLKILSIEDGTVLKVF 181 (389)
Q Consensus 112 dG~~Las~s~D-----~tiklWdl~~g~~--l~tl~~~-~V~~vafS~g~~la~~~~~s~d--~tiklWd~~tG~~l~tl 181 (389)
++++++.|+.+ ..+.++|+.+.+- +..++.. .-.+++.-++.+++.+..+... ..+..+|+.+.+-...-
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 140 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA 140 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC
Confidence 68888888855 3578888877762 2222221 1112222366666666543322 36778898887644321
Q ss_pred eecCCce-eEEEEEecCCCeEEEEeC-------CCcEEEEECCCCeEEEEc--ccCCCceEEEEEcCCCcEEEEEc-C--
Q 016446 182 YHLLHRN-KKVDFIEQFNEKLLVKQE-------NENLQILDVRNAELMEVS--RTEFMTPSAFIFLYENQLFLTFR-N-- 248 (389)
Q Consensus 182 ~~~~~~~-~~v~f~~~~~~~l~~~s~-------D~tIklWd~~tg~~~~~l--~gh~~~v~sv~fspdg~~laS~s-D-- 248 (389)
.-...+. ..++. .++..++.|+. -..+.++|+.+.+-.+.- .........+ ..++++++.|+ +
T Consensus 141 ~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~ 216 (302)
T 2xn4_A 141 PMNTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVG--VLNNLLYAVGGHDGP 216 (302)
T ss_dssp CCSSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBSSS
T ss_pred CCCCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEE--EECCEEEEECCCCCC
Confidence 1111111 22222 23445555653 246889999988765432 1111111222 23788888876 4
Q ss_pred ---CeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeE
Q 016446 249 ---RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 318 (389)
Q Consensus 249 ---~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~ 318 (389)
..+.++|.+...-..+.....+. ..-..+ .-++++++.|+.+. ...-..|.++|+.+.+-
T Consensus 217 ~~~~~~~~yd~~~~~W~~~~~~~~~r--~~~~~~--~~~~~i~v~GG~~~------~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 217 LVRKSVEVYDPTTNAWRQVADMNMCR--RNAGVC--AVNGLLYVVGGDDG------SCNLASVEYYNPTTDKW 279 (302)
T ss_dssp SBCCCEEEEETTTTEEEEECCCSSCC--BSCEEE--EETTEEEEECCBCS------SSBCCCEEEEETTTTEE
T ss_pred cccceEEEEeCCCCCEeeCCCCCCcc--ccCeEE--EECCEEEEECCcCC------CcccccEEEEcCCCCeE
Confidence 36888998743333343221111 111222 23888888887642 01124689999887764
No 318
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.73 E-value=4.7 Score=38.11 Aligned_cols=160 Identities=8% Similarity=-0.005 Sum_probs=98.6
Q ss_pred cCCCeEEEEecCC--------------CeEEEEeCCCCeEEEEecCCcEEEEEEc-CCceEEEEe-cCCCCeeEEEEEcC
Q 016446 110 DVNGKVLTYSAQD--------------SIYKVFDLKNYTMLYSISDKHVQEIKIS-PGIMLLIFN-RSSSHVPLKILSIE 173 (389)
Q Consensus 110 ~pdG~~Las~s~D--------------~tiklWdl~~g~~l~tl~~~~V~~vafS-~g~~la~~~-~~s~d~tiklWd~~ 173 (389)
.|+|..|..++.. ..|+.-++..++ ...+...... +|+ +|++|+-+. .......|..-++.
T Consensus 61 ~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~-~~~l~~~~~~--~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d 137 (302)
T 3s25_A 61 NADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG-STVLDPDPCI--YASLIGNYIYYLHYDTQTATSLYRIRID 137 (302)
T ss_dssp EECSSEEEEEEECC------CCSSCCSEEEEEEETTSCC-CEEEECSCEE--EEEEETTEEEEEEESSSSCEEEEEEETT
T ss_pred EEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc-ceEeecCCcc--EEEEeCCEEEEEeecCCCCceEEEEECC
Confidence 4788888887653 356666765444 2233333322 566 688888764 12344677777875
Q ss_pred CCeEEEEEeecCCceeEEEEEecCCCeEEEEeC-CCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc--CC-
Q 016446 174 DGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQE-NENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR--NR- 249 (389)
Q Consensus 174 tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~-D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s--D~- 249 (389)
|.....|..+ .. .+|. ++++.|.-.+. ..+|..-++..+.....+++. . ..++.|+|+.|+=.. ++
T Consensus 138 -Gs~~~~lt~~--~~--~~~~-~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~---~-~~~~~P~g~~iy~t~~~~~~ 207 (302)
T 3s25_A 138 -GEEKKKIKNH--YL--FTCN-TSDRYFYYNNPKNGQLYRYDTASQSEALFYDCN---C-YKPVVLDDTNVYYMDVNRDN 207 (302)
T ss_dssp -SCCCEEEESS--CC--CCSE-EETTEEEEECTTTCCEEEEETTTTEEEEEECSC---E-EEEEEEETTEEEEEEGGGTT
T ss_pred -CCCeEEEeCC--Cc--eEee-EECCEEEEEeCCCceEEEEECCCCCEEEEeCCC---c-cceeeecCCEEEEEEcCCCc
Confidence 4555666543 22 3454 66888887764 788888898877765554432 2 234679888887553 33
Q ss_pred eEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEE
Q 016446 250 TVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISY 291 (389)
Q Consensus 250 tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~ 291 (389)
.|..=+++|.-.+.|.... + ..|+|+|++|.-+
T Consensus 208 ~I~~~~ldG~~~~~Lt~~~-------~--~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 208 AIVHVNINNPNPVVLTEAN-------I--EHYNVYGSLIFYQ 240 (302)
T ss_dssp EEEEECSSSCCCEECSCSC-------E--EEEEEETTEEEEE
T ss_pred EEEEEECCCCCeEEEeCCC-------c--ceEEECCCEEEEE
Confidence 4555556776666665322 2 3488999999754
No 319
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.11 E-value=6.4 Score=37.72 Aligned_cols=233 Identities=9% Similarity=0.071 Sum_probs=117.6
Q ss_pred EEEEEee--ccEEEEEecCceEEEEecccceee---eeee---cCCcceEEEEEEeeC----CCEEEEEEEeecCCCcce
Q 016446 6 VIEIVAA--RDIVFALAHSGVCAAFSRETNRRI---CFLN---VSPDEVIRSLFYNKN----NDSLITVSVYASDNFSSL 73 (389)
Q Consensus 6 v~~i~~~--~~~~a~~~~~gtiklW~~~tg~~l---~tl~---~~~~~~v~sv~~spd----g~~l~s~s~~~~~d~~~l 73 (389)
-..|.|. |..|.++...|.|++++.+ |+.. ..+. .........|+|+|| |...++-+.....+ .
T Consensus 20 P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g---~ 95 (353)
T 2g8s_A 20 PWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG---K 95 (353)
T ss_dssp EEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS---C
T ss_pred cEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC---C
Confidence 3567777 4426666778999999864 5532 2121 111245689999995 54444422211111 0
Q ss_pred eeeeeeEeEeccC--CCCCcceeEeee-----cccCceeEEEecCCCeEEEEecCC-------------CeEEEEeCCCC
Q 016446 74 KCRSTKIEYIRRG--KPDSGFALFESE-----SLKWPGFVEFDDVNGKVLTYSAQD-------------SIYKVFDLKNY 133 (389)
Q Consensus 74 ~~~~~~l~~i~~g--~~~~~~~l~~~~-----~~~~~~~v~Fs~pdG~~Las~s~D-------------~tiklWdl~~g 133 (389)
.-..+.-+++..+ ++.....++... ...++..++|+ |||.+.++-+.. +.|.-.+. +|
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~-pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~-dG 173 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFD-GKGYLFIALGENNQRPTAQDLDKLQGKLVRLTD-QG 173 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEEC-SSSEEEEEECCTTCGGGGGCTTSCTTEEEEEET-TS
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEEC-CCCcEEEEECCCCCCCccCCCCCCCeEEEEECC-CC
Confidence 0012222222211 221122233311 11124579998 899887775432 34555554 33
Q ss_pred e---------------EEEEecCCcEEEEEEcC-CceEEEEecCCCCeeEEEEEcCCCe---------------------
Q 016446 134 T---------------MLYSISDKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGT--------------------- 176 (389)
Q Consensus 134 ~---------------~l~tl~~~~V~~vafS~-g~~la~~~~~s~d~tiklWd~~tG~--------------------- 176 (389)
+ .++..-....+.++|.| ...|.++... .+..=+|.-+..|.
T Consensus 174 ~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g-~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~ 252 (353)
T 2g8s_A 174 EIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHG-PRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEA 252 (353)
T ss_dssp CCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEEC-SBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTC
T ss_pred CCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecC-CCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcc
Confidence 2 23333234578999996 5666555433 11111222222211
Q ss_pred ----------EEEEEeecCCceeEEEEEec-----CCCeEEEEe-CCCcEEEEECCCCeEEE---EcccCCCceEEEEEc
Q 016446 177 ----------VLKVFYHLLHRNKKVDFIEQ-----FNEKLLVKQ-ENENLQILDVRNAELME---VSRTEFMTPSAFIFL 237 (389)
Q Consensus 177 ----------~l~tl~~~~~~~~~v~f~~~-----~~~~l~~~s-~D~tIklWd~~tg~~~~---~l~gh~~~v~sv~fs 237 (389)
.+..+..| .....++|..- ..+.++.+. ..+.|...++..++... .+.+-...+..|++.
T Consensus 253 ~~~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~ 331 (353)
T 2g8s_A 253 KGEIVAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTG 331 (353)
T ss_dssp CBSSCTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEEC
T ss_pred cCCCCCCccCCeEEeCCC-cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEEC
Confidence 11122211 12345666421 124555554 77888888887665432 233444589999999
Q ss_pred CCCcEEEEE
Q 016446 238 YENQLFLTF 246 (389)
Q Consensus 238 pdg~~laS~ 246 (389)
|||.+.++.
T Consensus 332 pdG~lyv~t 340 (353)
T 2g8s_A 332 PDGYLYVLT 340 (353)
T ss_dssp TTSCEEEEE
T ss_pred CCCcEEEEE
Confidence 999988764
No 320
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.97 E-value=5.4 Score=36.50 Aligned_cols=195 Identities=7% Similarity=-0.002 Sum_probs=97.6
Q ss_pred CeEEEEecC--CCeEEEEeCCCCeEE--EEecCCc-EEEEEEcCCceEEEEecC-CCCeeEEEEEcCCCeEEEEEeecCC
Q 016446 113 GKVLTYSAQ--DSIYKVFDLKNYTML--YSISDKH-VQEIKISPGIMLLIFNRS-SSHVPLKILSIEDGTVLKVFYHLLH 186 (389)
Q Consensus 113 G~~Las~s~--D~tiklWdl~~g~~l--~tl~~~~-V~~vafS~g~~la~~~~~-s~d~tiklWd~~tG~~l~tl~~~~~ 186 (389)
+.+++.|+. ...+.++|..+.+-. ..+.... =.+++.-++.+++.+... ..-..+..+|+.+++-...-.-...
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 445555554 357778888777622 2222111 112222356666555322 1124678899988764433221112
Q ss_pred ceeEEEEEecCCCeEEEEeCC------CcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-C---------Ce
Q 016446 187 RNKKVDFIEQFNEKLLVKQEN------ENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-N---------RT 250 (389)
Q Consensus 187 ~~~~v~f~~~~~~~l~~~s~D------~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D---------~t 250 (389)
+....+.. .++..++.|+.+ ..+.++|..+.+-.+...-........+...++++++.|+ + ..
T Consensus 92 r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 170 (306)
T 3ii7_A 92 RDSLAACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNS 170 (306)
T ss_dssp CBSCEEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCC
T ss_pred ccceeEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccce
Confidence 22212222 334555567654 5689999998876554211111111111223778877775 2 34
Q ss_pred EEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeE
Q 016446 251 VAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 318 (389)
Q Consensus 251 IklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~ 318 (389)
+..+|.....-..+..-..+. ..-..+.+ ++++++.|+.+.. ..-..+.++|+.+.+-
T Consensus 171 ~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~--~~~i~v~GG~~~~------~~~~~~~~yd~~~~~W 228 (306)
T 3ii7_A 171 CEVYDPATETWTELCPMIEAR--KNHGLVFV--KDKIFAVGGQNGL------GGLDNVEYYDIKLNEW 228 (306)
T ss_dssp EEEEETTTTEEEEECCCSSCC--BSCEEEEE--TTEEEEECCEETT------EEBCCEEEEETTTTEE
T ss_pred EEEeCCCCCeEEECCCccchh--hcceEEEE--CCEEEEEeCCCCC------CCCceEEEeeCCCCcE
Confidence 778898643333343211110 11122233 7888888765420 0124688999887753
No 321
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=92.64 E-value=16 Score=41.16 Aligned_cols=214 Identities=11% Similarity=0.085 Sum_probs=123.4
Q ss_pred CCeEEEEeCCCCe--EEEEec-CCcEEEEEEcC-CceEEEEecCC-----------------------------------
Q 016446 122 DSIYKVFDLKNYT--MLYSIS-DKHVQEIKISP-GIMLLIFNRSS----------------------------------- 162 (389)
Q Consensus 122 D~tiklWdl~~g~--~l~tl~-~~~V~~vafS~-g~~la~~~~~s----------------------------------- 162 (389)
++++|+-.+.+-+ .+.+++ +..++.|+++| .+.++......
T Consensus 714 ~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1158)
T 3ei3_A 714 NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSST 793 (1158)
T ss_dssp SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----
T ss_pred CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccc
Confidence 5679998875433 456666 67899999994 44433332110
Q ss_pred -----------CCeeEEEEEcCCCeEEEEEeecC-CceeEEEEEecC---CCeEEEEe----------CCCcEEEEECCC
Q 016446 163 -----------SHVPLKILSIEDGTVLKVFYHLL-HRNKKVDFIEQF---NEKLLVKQ----------ENENLQILDVRN 217 (389)
Q Consensus 163 -----------~d~tiklWd~~tG~~l~tl~~~~-~~~~~v~f~~~~---~~~l~~~s----------~D~tIklWd~~t 217 (389)
.-..|+|.|-.+.+.+.+++... ..+.+++..... ..+++.|. ..|.|.++++..
T Consensus 794 ~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~ 873 (1158)
T 3ei3_A 794 APHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSD 873 (1158)
T ss_dssp ------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEET
T ss_pred cCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEEC
Confidence 01368999999999888776322 233555543222 35777764 137799999975
Q ss_pred CeEEEEc-ccCCCceEEEEEcCCCcEEEEEcCCeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCC
Q 016446 218 AELMEVS-RTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAE 295 (389)
Q Consensus 218 g~~~~~l-~gh~~~v~sv~fspdg~~laS~sD~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~ 295 (389)
+++.... ....+.|.+++=- +|+ |+.+-.++|++|++. .+.++ ++...-.. |..+.....|.+|+.|..-
T Consensus 874 ~kL~lv~~~~v~g~v~al~~~-~g~-Lla~ig~~l~vy~l~~~~~L~-~~~~~~~~----i~~~~l~~~~~~I~vgD~~- 945 (1158)
T 3ei3_A 874 GKLQTVAEKEVKGAVYSMVEF-NGK-LLASINSTVRLYEWTTEKELR-TECNHYNN----IMALYLKTKGDFILVGDLM- 945 (1158)
T ss_dssp TEEEEEEEEEESSCEEEEEEE-TTE-EEEEETTEEEEEEECTTSCEE-EEEEECCC----SCEEEEEEETTEEEEEESS-
T ss_pred CEEEEEEEEEcCCcCEEEeee-CCE-EEEEcCCEEEEEECCCCceEE-EEeecccc----EEEEEEeccCCEEEEEEhh-
Confidence 5543322 2345678887532 465 444557899999996 44444 32211110 2233333457788877432
Q ss_pred CcccccCCCCCeEEE--EeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCC
Q 016446 296 PEDQWMEGSAGSINV--SSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERN 373 (389)
Q Consensus 296 ~~~~~~~s~D~tIkl--Wd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~ 373 (389)
+.|-+ |+-..+++. .+-.+.. ..+|+++.|=-++
T Consensus 946 ----------~Sv~~~~y~~~~~~L~-~~a~D~~--------------------------------~~~vta~~~ld~~- 981 (1158)
T 3ei3_A 946 ----------RSVLLLAYKPMEGNFE-EIARDFN--------------------------------PNWMSAVEILDDD- 981 (1158)
T ss_dssp ----------BCEEEEEEETTTTEEE-EEEECCS--------------------------------CBCEEEEEEEETT-
T ss_pred ----------heEEEEEEEcCCCeEE-EEEeecc--------------------------------cccEEEEEEEccC-
Confidence 34444 454434433 2222220 1488899886554
Q ss_pred EEEEecCCCcEEEc
Q 016446 374 EIYTGNRHGLVHVW 387 (389)
Q Consensus 374 ~LaSgs~D~tIrlW 387 (389)
+++.+..+|.+.+-
T Consensus 982 t~l~aD~~gNl~vl 995 (1158)
T 3ei3_A 982 NFLGAENAFNLFVC 995 (1158)
T ss_dssp EEEEEETTSEEEEE
T ss_pred cEEEEcCCCcEEEE
Confidence 66778888887764
No 322
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.53 E-value=6.2 Score=36.08 Aligned_cols=195 Identities=7% Similarity=-0.035 Sum_probs=103.7
Q ss_pred CCeEEEEecCC----CeEEEEeCCCCeE--EEEecCCcE-EEEEEcCCceEEEEecC-C--CCeeEEEEEcCCCeEEEEE
Q 016446 112 NGKVLTYSAQD----SIYKVFDLKNYTM--LYSISDKHV-QEIKISPGIMLLIFNRS-S--SHVPLKILSIEDGTVLKVF 181 (389)
Q Consensus 112 dG~~Las~s~D----~tiklWdl~~g~~--l~tl~~~~V-~~vafS~g~~la~~~~~-s--~d~tiklWd~~tG~~l~tl 181 (389)
++++++.|+.+ ..+..+|+.+.+- +..++.... .+++.-++.+++.+..+ . .-..+..+|+.+.+-...-
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~ 134 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP 134 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC
Confidence 68888888865 6788889888763 233332111 12222266666665432 1 1246888999887643321
Q ss_pred eecCCce-eEEEEEecCCCeEEEEeC---------CCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-C--
Q 016446 182 YHLLHRN-KKVDFIEQFNEKLLVKQE---------NENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-N-- 248 (389)
Q Consensus 182 ~~~~~~~-~~v~f~~~~~~~l~~~s~---------D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D-- 248 (389)
.-...+. ..++. .++..++.|+. -..+.++|+++.+-.+.-.-........+..-++++++-|+ +
T Consensus 135 ~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~ 212 (306)
T 3ii7_A 135 SMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGL 212 (306)
T ss_dssp CCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETT
T ss_pred CCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCC
Confidence 1111222 12222 23444555552 35688999998875544211111111112223778888775 3
Q ss_pred ---CeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeE
Q 016446 249 ---RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 318 (389)
Q Consensus 249 ---~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~ 318 (389)
..+.++|.....-..+..-..+ -.....+.+ ++++++.|+.+. ...-..|.++|+.+.+-
T Consensus 213 ~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~--~~~i~v~GG~~~------~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 213 GGLDNVEYYDIKLNEWKMVSPMPWK--GVTVKCAAV--GSIVYVLAGFQG------VGRLGHILEYNTETDKW 275 (306)
T ss_dssp EEBCCEEEEETTTTEEEECCCCSCC--BSCCEEEEE--TTEEEEEECBCS------SSBCCEEEEEETTTTEE
T ss_pred CCCceEEEeeCCCCcEEECCCCCCC--ccceeEEEE--CCEEEEEeCcCC------CeeeeeEEEEcCCCCeE
Confidence 4678889864333333211111 111123333 888999887652 11235789999988764
No 323
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.96 E-value=7.1 Score=35.50 Aligned_cols=220 Identities=8% Similarity=0.009 Sum_probs=109.1
Q ss_pred ceEEEEecccce--eeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCC---CCCcceeEee
Q 016446 23 GVCAAFSRETNR--RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGK---PDSGFALFES 97 (389)
Q Consensus 23 gtiklW~~~tg~--~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~---~~~~~~l~~~ 97 (389)
..+..+|..+++ .+..+.... ...-+...+++.++. |+.+ ..-....+.++|..+++ ......+- .
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~~~~l~v~----GG~~-~~~~~~~~~~~d~~~~~~~~W~~~~~~p-~ 101 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKR---RYVASVSLHDRIYVI----GGYD-GRSRLSSVECLDYTADEDGVWYSVAPMN-V 101 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCC---BSCEEEEETTEEEEE----CCBC-SSCBCCCEEEEETTCCTTCCCEEECCCS-S
T ss_pred eEEEEEcCCCCeEEeCCCCChhh---ccccEEEECCEEEEE----cCCC-CCccCceEEEEECCCCCCCeeEECCCCC-C
Confidence 467788887654 222222211 111122345665555 4443 22233556677776665 31100000 0
Q ss_pred ecccCceeEEEecCCCeEEEEecCC-----CeEEEEeCCCCe--EEEEecCCc-EEEEEEcCCceEEEEecCCC--CeeE
Q 016446 98 ESLKWPGFVEFDDVNGKVLTYSAQD-----SIYKVFDLKNYT--MLYSISDKH-VQEIKISPGIMLLIFNRSSS--HVPL 167 (389)
Q Consensus 98 ~~~~~~~~v~Fs~pdG~~Las~s~D-----~tiklWdl~~g~--~l~tl~~~~-V~~vafS~g~~la~~~~~s~--d~ti 167 (389)
.... .+++. .++++++.|+.+ ..+.++|+.+.+ .+..+.... -.+++..++.+++.+..++. -..+
T Consensus 102 ~r~~--~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 177 (301)
T 2vpj_A 102 RRGL--AGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSV 177 (301)
T ss_dssp CCBS--CEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCE
T ss_pred Cccc--eeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceE
Confidence 0111 12333 368999888754 367888988776 233333211 12223336666665543321 2468
Q ss_pred EEEEcCCCeEEEEEeecCCce-eEEEEEecCCCeEEEEeCC-----CcEEEEECCCCeEEEEcccCCCceEEEEEcCCCc
Q 016446 168 KILSIEDGTVLKVFYHLLHRN-KKVDFIEQFNEKLLVKQEN-----ENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ 241 (389)
Q Consensus 168 klWd~~tG~~l~tl~~~~~~~-~~v~f~~~~~~~l~~~s~D-----~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~ 241 (389)
..+|+.+++-...-.-...+. ..+.. .++..++.|+.+ ..+.++|+++.+-.+.-.-........+..-+++
T Consensus 178 ~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 255 (301)
T 2vpj_A 178 EKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGR 255 (301)
T ss_dssp EEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTE
T ss_pred EEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCE
Confidence 889988876443211111111 12222 234455556643 5789999998876554221111111112223788
Q ss_pred EEEEEc-C-----CeEEEEeCC
Q 016446 242 LFLTFR-N-----RTVAVWNFR 257 (389)
Q Consensus 242 ~laS~s-D-----~tIklWd~~ 257 (389)
+++-|+ + ..|.++|.+
T Consensus 256 i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 256 LYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp EEEECCBCSSSBEEEEEEEETT
T ss_pred EEEEcCcCCCcccccEEEEcCC
Confidence 888776 5 467788876
No 324
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.92 E-value=6.8 Score=36.04 Aligned_cols=193 Identities=10% Similarity=-0.003 Sum_probs=101.3
Q ss_pred CCeEEEEecC----C-----CeEEEEeCCCCeEE--EEecCC-cEEEEEEcCCceEEEEecCCC--CeeEEEEEcCCCeE
Q 016446 112 NGKVLTYSAQ----D-----SIYKVFDLKNYTML--YSISDK-HVQEIKISPGIMLLIFNRSSS--HVPLKILSIEDGTV 177 (389)
Q Consensus 112 dG~~Las~s~----D-----~tiklWdl~~g~~l--~tl~~~-~V~~vafS~g~~la~~~~~s~--d~tiklWd~~tG~~ 177 (389)
++++++.|+. + ..+.++|+.+.+-. ..+... .-.+++.-++.+++.+...+. -..+..+|+.+.+-
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 149 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEW 149 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeE
Confidence 6888888876 2 46778888777622 222211 111222236666665532221 13678899888664
Q ss_pred EEEEeecCCce-eEEEEEecCCCeEEEEeCC-----CcEEEEECCCCeEEEEc--ccCCCceEEEEEcCCCcEEEEEc-C
Q 016446 178 LKVFYHLLHRN-KKVDFIEQFNEKLLVKQEN-----ENLQILDVRNAELMEVS--RTEFMTPSAFIFLYENQLFLTFR-N 248 (389)
Q Consensus 178 l~tl~~~~~~~-~~v~f~~~~~~~l~~~s~D-----~tIklWd~~tg~~~~~l--~gh~~~v~sv~fspdg~~laS~s-D 248 (389)
...-.-...+. ..+.. .++..++.|+.+ ..+.++|+.+.+-.+.- ......-.++.+ ++++++-|+ +
T Consensus 150 ~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 225 (308)
T 1zgk_A 150 HLVAPMLTRRIGVGVAV--LNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYD 225 (308)
T ss_dssp EECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred eECCCCCccccceEEEE--ECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCC
Confidence 33211111111 22222 234455556643 56899999887754432 111111122333 788888775 4
Q ss_pred -----CeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeE
Q 016446 249 -----RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 318 (389)
Q Consensus 249 -----~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~ 318 (389)
..+.++|+....-..+..-..+ -..-..+. -++++++.|+.+. ...-..|.++|+++.+-
T Consensus 226 ~~~~~~~v~~yd~~~~~W~~~~~~p~~--r~~~~~~~--~~~~i~v~GG~~~------~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 226 GQDQLNSVERYDVETETWTFVAPMKHR--RSALGITV--HQGRIYVLGGYDG------HTFLDSVECYDPDTDTW 290 (308)
T ss_dssp SSSBCCCEEEEETTTTEEEECCCCSSC--CBSCEEEE--ETTEEEEECCBCS------SCBCCEEEEEETTTTEE
T ss_pred CCCccceEEEEeCCCCcEEECCCCCCC--ccceEEEE--ECCEEEEEcCcCC------CcccceEEEEcCCCCEE
Confidence 5688999874433333311111 01112223 3788888887652 11235788999887764
No 325
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=91.15 E-value=8.7 Score=34.97 Aligned_cols=227 Identities=10% Similarity=0.068 Sum_probs=108.8
Q ss_pred ceEEEEecccce--eeeeeecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeecc
Q 016446 23 GVCAAFSRETNR--RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESL 100 (389)
Q Consensus 23 gtiklW~~~tg~--~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~ 100 (389)
..+..+|..+++ .+..+..... . .+++ .-+++.++. |+.+ ..-....+.++|..+++......+- ....
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~-~-~~~~-~~~~~lyv~----GG~~-~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~ 100 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRC-R-AGMV-YMAGLVFAV----GGFN-GSLRVRTVDSYDPVKDQWTSVANMR-DRRS 100 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCB-S-CEEE-EETTEEEEE----SCBC-SSSBCCCEEEEETTTTEEEEECCCS-SCCB
T ss_pred CcEEEEcCcCCcEeEcccCCcccc-c-ceEE-EECCEEEEE----eCcC-CCccccceEEECCCCCceeeCCCCC-cccc
Confidence 457788876554 2222222110 0 1222 236665555 5544 2233355666666555431100000 0011
Q ss_pred cCceeEEEecCCCeEEEEecCCC-----eEEEEeCCCCeEE--EEecCC-cEEEEEEcCCceEEEEecCCC----CeeEE
Q 016446 101 KWPGFVEFDDVNGKVLTYSAQDS-----IYKVFDLKNYTML--YSISDK-HVQEIKISPGIMLLIFNRSSS----HVPLK 168 (389)
Q Consensus 101 ~~~~~v~Fs~pdG~~Las~s~D~-----tiklWdl~~g~~l--~tl~~~-~V~~vafS~g~~la~~~~~s~----d~tik 168 (389)
. .+++. .++++++.|+.++ .+.++|+.+.+-. ..+... .-.+++.-++.+.+.+..+.. -..+.
T Consensus 101 ~--~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 176 (302)
T 2xn4_A 101 T--LGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVE 176 (302)
T ss_dssp S--CEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEE
T ss_pred c--eEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEE
Confidence 1 12333 2688888888653 5778888777632 222211 112233336666655533222 24688
Q ss_pred EEEcCCCeEEEEEeecCCce-eEEEEEecCCCeEEEEeCC-----CcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcE
Q 016446 169 ILSIEDGTVLKVFYHLLHRN-KKVDFIEQFNEKLLVKQEN-----ENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQL 242 (389)
Q Consensus 169 lWd~~tG~~l~tl~~~~~~~-~~v~f~~~~~~~l~~~s~D-----~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~ 242 (389)
.+|+.+++-...-.-...+. ..+.. .++..++.|+.+ ..+.++|+++.+-.+.-.-.......-+...++++
T Consensus 177 ~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i 254 (302)
T 2xn4_A 177 CYNATTNEWTYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLL 254 (302)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEE
T ss_pred EEeCCCCcEEECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEE
Confidence 89998875433211111111 22222 234555556643 47899999988765442111111111122337888
Q ss_pred EEEEc-CC-----eEEEEeCCCcEEEEe
Q 016446 243 FLTFR-NR-----TVAVWNFRGELVTSF 264 (389)
Q Consensus 243 laS~s-D~-----tIklWd~~G~~l~tl 264 (389)
++-|+ ++ .|.++|.+...-..+
T Consensus 255 ~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 282 (302)
T 2xn4_A 255 YVVGGDDGSCNLASVEYYNPTTDKWTVV 282 (302)
T ss_dssp EEECCBCSSSBCCCEEEEETTTTEEEEC
T ss_pred EEECCcCCCcccccEEEEcCCCCeEEEC
Confidence 88776 53 478888864433333
No 326
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=90.67 E-value=1.5 Score=40.76 Aligned_cols=98 Identities=8% Similarity=-0.065 Sum_probs=58.4
Q ss_pred CceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeE-------EEEcc-cCCCceEEEEEcCCCcEEEEEcCCeEEEEeC-
Q 016446 186 HRNKKVDFIEQFNEKLLVKQENENLQILDVRNAEL-------MEVSR-TEFMTPSAFIFLYENQLFLTFRNRTVAVWNF- 256 (389)
Q Consensus 186 ~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~-------~~~l~-gh~~~v~sv~fspdg~~laS~sD~tIklWd~- 256 (389)
+....++|. |++...++ .++.+.--+..++.. .+.-. |-. .-.++.|-|+|.+-++ +||.|.=|+.
T Consensus 41 ~~~~~laf~-P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav-~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLS-PGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV-SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEEC-TTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE-ETTEEEEESCC
T ss_pred ccceeEEEC-CCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe-CCCEEEEeCCC
Confidence 356688998 55554444 566544445444221 11111 111 1378899999999998 8898877775
Q ss_pred -CCcE--E--EEeccCcCCcCCCCeeEEEECCCCCEEEEE
Q 016446 257 -RGEL--V--TSFEDHLLWHPDCNTNNIYITSDQDLIISY 291 (389)
Q Consensus 257 -~G~~--l--~tl~gh~~~~~~~~v~sv~fSpdG~~laS~ 291 (389)
++.- + .+.-+...|. .+..|+|.|||.+-|..
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~---~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWS---GFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGG---GEEEEEECTTSCEEEEE
T ss_pred cCCCCceeccccEeccCCCC---ceEEEEECCCceEEEEe
Confidence 2321 0 1222223342 37899999999999876
No 327
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=90.11 E-value=1.3 Score=49.00 Aligned_cols=37 Identities=14% Similarity=0.277 Sum_probs=32.8
Q ss_pred eeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEec
Q 016446 276 TNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKIN 323 (389)
Q Consensus 276 v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~ 323 (389)
+.+++.++|..+|.+-|.| +++|+||+.+|+|+.+..
T Consensus 238 ~~~~~~~~~~~~lftl~~D-----------~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLD-----------YKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EEEEEEETTTTEEEEEETT-----------CEEEEEETTTTEEEEEEE
T ss_pred EEEEeecCCCcEEEEEECC-----------CEEEEEECCCCCeEeeec
Confidence 6778888999999998875 899999999999998864
No 328
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=89.67 E-value=0.52 Score=43.77 Aligned_cols=108 Identities=10% Similarity=0.011 Sum_probs=62.8
Q ss_pred CceEEEEEcCCCcEEEEEcCCeEEEEeCC-Cc--E-----EEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccc
Q 016446 229 MTPSAFIFLYENQLFLTFRNRTVAVWNFR-GE--L-----VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQW 300 (389)
Q Consensus 229 ~~v~sv~fspdg~~laS~sD~tIklWd~~-G~--~-----l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~ 300 (389)
..+..++|+|+|.+.|. +++. ||..+ .. . ..+--|...|.. -..++|.|+|.+.|+ +
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~--Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~---F~a~~fD~~G~LYav-~-------- 105 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDK--IYKGTPPTHDNDNWMGRAKKIGNGGWNQ---FQFLFFDPNGYLYAV-S-------- 105 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTE--EEEESCCCSTTCCHHHHCEEEECSCGGG---CSEEEECTTSCEEEE-E--------
T ss_pred ccceeEEECCCccEEEE-eCCe--EEEECCCCCCcccccccccEeccccccc---ceEEEECCCCCEEEe-C--------
Confidence 36679999999998887 7664 66543 11 0 012222223311 268999999999998 3
Q ss_pred cCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCCCEEEEecC
Q 016446 301 MEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEERNEIYTGNR 380 (389)
Q Consensus 301 ~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg~~LaSgs~ 380 (389)
||.|.=|+-.+..+-.-|.. . ..+. .+-| +.+..|+|+|||.+.|-.
T Consensus 106 ----dG~iyr~~pP~~~~~~Wl~~-a------~~vg-------------~~gw-------~~~~~lff~p~G~Lyav~-- 152 (236)
T 1tl2_A 106 ----KDKLYKASPPQSDTDNWIAR-A------TEVG-------------SGGW-------SGFKFLFFHPNGYLYAVH-- 152 (236)
T ss_dssp ----TTEEEEESCCCSTTCCHHHH-S------EEEE-------------CSSG-------GGEEEEEECTTSCEEEEE--
T ss_pred ----CCEEEEeCCCcCCCCceecc-c------cEec-------------cCCC-------CceEEEEECCCceEEEEe--
Confidence 48887777432111000000 0 0000 0011 478999999999977666
Q ss_pred CCcE
Q 016446 381 HGLV 384 (389)
Q Consensus 381 D~tI 384 (389)
|+.+
T Consensus 153 dg~l 156 (236)
T 1tl2_A 153 GQQF 156 (236)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 7664
No 329
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.66 E-value=11 Score=37.89 Aligned_cols=113 Identities=11% Similarity=0.091 Sum_probs=66.0
Q ss_pred EEEEEeecCCceeEEEEEecCCC-eEEEEeCCCcEEEEECCCCe---EEEEcc-----c----CCCceEEEEEcCC----
Q 016446 177 VLKVFYHLLHRNKKVDFIEQFNE-KLLVKQENENLQILDVRNAE---LMEVSR-----T----EFMTPSAFIFLYE---- 239 (389)
Q Consensus 177 ~l~tl~~~~~~~~~v~f~~~~~~-~l~~~s~D~tIklWd~~tg~---~~~~l~-----g----h~~~v~sv~fspd---- 239 (389)
++.++..-...-+.++|. |++. +++++...+.|++++..... .+..+. + .......|+|+|+
T Consensus 5 ~v~~va~gL~~P~~~a~~-pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n 83 (463)
T 2wg3_C 5 CIQEVVSGLRQPVGALHS-GDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKN 83 (463)
T ss_dssp EEEEEEEEESSEEEEECC-SSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHH
T ss_pred EEEEeccCCCCceEEEEC-CCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCC
Confidence 344444223455788887 6664 68888889999999754321 122111 1 2456788999996
Q ss_pred CcEEEEEc-CC----------eEEE--EeCC-C----------cEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEec
Q 016446 240 NQLFLTFR-NR----------TVAV--WNFR-G----------ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 293 (389)
Q Consensus 240 g~~laS~s-D~----------tIkl--Wd~~-G----------~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~ 293 (389)
+.+.++-+ +. ..+| |.++ + +.|.++......|. -..|+|.|||++.++-+.
T Consensus 84 ~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~---g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 84 GKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHL---GGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSC---EEEEEECTTSCEEEEECC
T ss_pred CEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCccc---CCcEeECCCCcEEEEeCC
Confidence 77776654 21 1334 4442 1 23333331111221 479999999998888654
No 330
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.24 E-value=2.5 Score=44.35 Aligned_cols=101 Identities=12% Similarity=0.051 Sum_probs=64.7
Q ss_pred cEEEEECCC----CeEEEEcccCCCceEEEEEcCCCcEEEEEc--CCeEEEEeCC-------CcE-------EEEeccCc
Q 016446 209 NLQILDVRN----AELMEVSRTEFMTPSAFIFLYENQLFLTFR--NRTVAVWNFR-------GEL-------VTSFEDHL 268 (389)
Q Consensus 209 tIklWd~~t----g~~~~~l~gh~~~v~sv~fspdg~~laS~s--D~tIklWd~~-------G~~-------l~tl~gh~ 268 (389)
.+++-|.+. +..+..+-.-...+..|-++|||++++.++ +.|+-+.|++ +++ +...+--.
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 578888876 433222223334566688999999998886 9999999965 222 22232112
Q ss_pred CCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCC----------eEEEEecCCC
Q 016446 269 LWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTG----------KCLAKINATN 326 (389)
Q Consensus 269 ~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg----------~~l~tl~gH~ 326 (389)
+ -.-.+|.++|.-..|-.- |..|--||+... ..+.++.-|-
T Consensus 379 G------PlHt~Fd~~G~aYTtlfi-----------dSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Y 429 (638)
T 3sbq_A 379 G------PLHTTFDGRGNAYTTLFI-----------DSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHY 429 (638)
T ss_dssp C------EEEEEECSSSEEEEEETT-----------TTEEEEEEHHHHHHHHTTCCCCCEEEEEECSS
T ss_pred c------ccEEEECCCCceEeeeee-----------cceEEEEeccHHHHHhcCccCCeeeecccccc
Confidence 2 378999999944444333 467889999764 4566665553
No 331
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=88.19 E-value=13 Score=37.64 Aligned_cols=124 Identities=11% Similarity=0.116 Sum_probs=75.3
Q ss_pred EEEcCCCcEEEEEcCCeEEEEeCC-CcEEEEeccC--cCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEE
Q 016446 234 FIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDH--LLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINV 310 (389)
Q Consensus 234 v~fspdg~~laS~sD~tIklWd~~-G~~l~tl~gh--~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIkl 310 (389)
+.-..+|..+..+-++.||.-++. +.-.+.|.-. ... ..+..+..||+|++||..+. .+|.|
T Consensus 26 ~~~~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f---~~i~qlvlSpsG~lLAl~g~------------~~V~V 90 (452)
T 3pbp_A 26 IFSSQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVL---DDTFHVISSTSGDLLCLFND------------NEIFV 90 (452)
T ss_dssp EEEETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCC---CTTCEEEECTTSSEEEEECS------------SEEEE
T ss_pred EEEEcCCCEEEEEECCEEEEEECCCCCcceEEecCccccc---CceeEEEECCCCCEEEEecC------------CeEEE
Confidence 334667777877889999998986 5555555432 222 12678999999999999764 68888
Q ss_pred EeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccc-cccceecccccccCCEEEEEECCCC---CEEEEecCCCcEEE
Q 016446 311 SSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLN-KSSYIRSTVGEALEDITSLFYDEER---NEIYTGNRHGLVHV 386 (389)
Q Consensus 311 Wd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~V~svafSpdg---~~LaSgs~D~tIrl 386 (389)
=.+..+. |.. .+ ..+ ..++. ++-.+-++......+|..+.|+|-| ..|+.=-.|++||+
T Consensus 91 v~LP~~~-------~~~--~~-------~~~-~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~ 153 (452)
T 3pbp_A 91 MEVPWGY-------SNV--ED-------VSI-QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITM 153 (452)
T ss_dssp EECCTTC-------SCC--CC-------HHH-HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEE
T ss_pred EEecCcc-------ccC--cc-------ccc-ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEE
Confidence 7766332 110 00 000 00000 0000000000012589999999976 58999999999999
Q ss_pred ccC
Q 016446 387 WSN 389 (389)
Q Consensus 387 W~~ 389 (389)
||.
T Consensus 154 yDl 156 (452)
T 3pbp_A 154 FDI 156 (452)
T ss_dssp EET
T ss_pred EEc
Confidence 984
No 332
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=87.82 E-value=16 Score=33.40 Aligned_cols=236 Identities=7% Similarity=-0.039 Sum_probs=110.0
Q ss_pred cEEEEEeeccEEEEEec----CceEEEEecccce--eeeeeecCCcceEEEEEEeeCCCEEEEEEEeecC----CCccee
Q 016446 5 KVIEIVAARDIVFALAH----SGVCAAFSRETNR--RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASD----NFSSLK 74 (389)
Q Consensus 5 ~v~~i~~~~~~~a~~~~----~gtiklW~~~tg~--~l~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~~----d~~~l~ 74 (389)
.-..+...+.+++.+.. -..+.++|..+++ .+..+..... . .+++ ..+++.++. |+. + ..-.
T Consensus 17 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~-~-~~~~-~~~~~lyv~----GG~~~~~~-~~~~ 88 (308)
T 1zgk_A 17 GSHAPKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRS-G-LAGC-VVGGLLYAV----GGRNNSPD-GNTD 88 (308)
T ss_dssp ----CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCB-S-CEEE-EETTEEEEE----CCEEEETT-EEEE
T ss_pred CccccCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccc-c-ceEE-EECCEEEEE----CCCcCCCC-CCee
Confidence 33344444555555543 2467788887554 2222222111 1 1222 236665555 443 2 2222
Q ss_pred eeeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCC-----CeEEEEeCCCCeEE--EEecCC-cEEE
Q 016446 75 CRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD-----SIYKVFDLKNYTML--YSISDK-HVQE 146 (389)
Q Consensus 75 ~~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D-----~tiklWdl~~g~~l--~tl~~~-~V~~ 146 (389)
...+.++|..+.+......+- ..... .+++. -+|++++.|+.+ ..+..+|+.+.+-. ..+... .-.+
T Consensus 89 ~~~~~~~d~~~~~W~~~~~~p-~~r~~--~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 163 (308)
T 1zgk_A 89 SSALDCYNPMTNQWSPCAPMS-VPRNR--IGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVG 163 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCS-SCCBT--CEEEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCE
T ss_pred cceEEEECCCCCeEeECCCCC-cCccc--cEEEE--ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceE
Confidence 345556665555431110000 00111 12333 268898888754 36778888776622 222211 1112
Q ss_pred EEEcCCceEEEEecCCC--CeeEEEEEcCCCeEEEEEeecCCce-eEEEEEecCCCeEEEEeCC-----CcEEEEECCCC
Q 016446 147 IKISPGIMLLIFNRSSS--HVPLKILSIEDGTVLKVFYHLLHRN-KKVDFIEQFNEKLLVKQEN-----ENLQILDVRNA 218 (389)
Q Consensus 147 vafS~g~~la~~~~~s~--d~tiklWd~~tG~~l~tl~~~~~~~-~~v~f~~~~~~~l~~~s~D-----~tIklWd~~tg 218 (389)
++.-++.+++.+..++. -..+..+|+.+.+-...-.-...+. ..+.. .++..++.|+.+ ..+.++|+++.
T Consensus 164 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 164 VAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCV--LHNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEE--ECCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 22226666655533322 2468889988765432211111111 22222 234455556644 67999999988
Q ss_pred eEEEEcc--cCCCceEEEEEcCCCcEEEEEc-C-----CeEEEEeCC
Q 016446 219 ELMEVSR--TEFMTPSAFIFLYENQLFLTFR-N-----RTVAVWNFR 257 (389)
Q Consensus 219 ~~~~~l~--gh~~~v~sv~fspdg~~laS~s-D-----~tIklWd~~ 257 (389)
+-.+.-. ........+. -++++++-|+ + ..|.++|.+
T Consensus 242 ~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~ 286 (308)
T 1zgk_A 242 TWTFVAPMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPD 286 (308)
T ss_dssp EEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETT
T ss_pred cEEECCCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCC
Confidence 7655321 1111112222 3678887775 4 356777775
No 333
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=87.40 E-value=6.2 Score=38.34 Aligned_cols=110 Identities=12% Similarity=0.099 Sum_probs=66.3
Q ss_pred EEEEecCCCeEEEEeCCCCeEEEEecCC---cEEEEE---Ec-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCc
Q 016446 115 VLTYSAQDSIYKVFDLKNYTMLYSISDK---HVQEIK---IS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHR 187 (389)
Q Consensus 115 ~Las~s~D~tiklWdl~~g~~l~tl~~~---~V~~va---fS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~ 187 (389)
++.-++.||.|.-.|.++|+.+.+++.. .+.... .. ++..++ .. ...|+.+.-++.++|.....+.-. .-
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~v-v~-p~~dG~l~a~~~~~G~~~~~~~~~-~l 88 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLI-IE-PFGDGNIYYFNAHQGLQKLPLSIR-QL 88 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEE-EC-CSTTTEEEEEETTTEEEEEEEEHH-HH
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEE-EE-ECCCCEEEEEECCCCcEEeeeccc-cc
Confidence 4455677888888888888887777632 111111 00 123332 21 134578888888888666554411 11
Q ss_pred e--eEEEEEe----------cCCCeEEEEeCCCcEEEEECCCCeEEEEcccC
Q 016446 188 N--KKVDFIE----------QFNEKLLVKQENENLQILDVRNAELMEVSRTE 227 (389)
Q Consensus 188 ~--~~v~f~~----------~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh 227 (389)
+ ..+.+.. ..++.+.+++.++++---|+++|+.+..+...
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 1 1122100 04678889999999999999999999887543
No 334
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=83.63 E-value=41 Score=34.25 Aligned_cols=149 Identities=13% Similarity=0.155 Sum_probs=95.9
Q ss_pred eEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEE
Q 016446 166 PLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLT 245 (389)
Q Consensus 166 tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS 245 (389)
.|-+-|+.++.....-+ ...+-+...|....||... ..+++|.|+++.+.++...=.++-|..==.+|+- |+=
T Consensus 49 ~vvIiDl~~~~~~~rrp----i~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~--l~l 121 (494)
T 1bpo_A 49 QVVIIDMNDPSNPIRRP----ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNT--VAL 121 (494)
T ss_dssp EEEEEETTSTTSCEEEE----CCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTE--EEE
T ss_pred eEEEEECCCCCcceecc----cccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCe--EEE
Confidence 56666776654332211 0111222224444555554 8999999999999988765444444433335543 555
Q ss_pred EcCCeEEEEeCCC--cEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEec
Q 016446 246 FRNRTVAVWNFRG--ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKIN 323 (389)
Q Consensus 246 ~sD~tIklWd~~G--~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~ 323 (389)
..+..|--|+++| +.++-|+-|... .+|.|-.-..+||+++++-.+-.. -.+.-.|.+-|+.++ .+.-+.|.
T Consensus 122 VT~taVyHWsi~~~s~P~kvFdR~~~L-~~~QIInY~~d~~~kW~~l~GI~~----~~~~v~G~mQLYS~e-r~~sQ~ie 195 (494)
T 1bpo_A 122 VTDNAVYHWSMEGESQPVKMFDRHSSL-AGCQIINYRTDAKQKWLLLTGISA----QQNRVVGAMQLYSVD-RKVSQPIE 195 (494)
T ss_dssp ECSSEEEEEESSSSCCCEEEEECCGGG-TTCEEEEEEECTTSSEEEEEEEEE----ETTEEEEEEEEEEST-TCCEEEEC
T ss_pred EcCCeeEEecccCCCCchhheecchhc-ccceEEEEEECCCCCeEEEEeecc----cCCcccceEEEeecc-ccccchhe
Confidence 5688999999975 578888888775 357788889999999998554210 001224789999977 45567889
Q ss_pred CCCC
Q 016446 324 ATNC 327 (389)
Q Consensus 324 gH~~ 327 (389)
||..
T Consensus 196 Ghaa 199 (494)
T 1bpo_A 196 GHAA 199 (494)
T ss_dssp CSEE
T ss_pred eeee
Confidence 9973
No 335
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=83.50 E-value=36 Score=33.41 Aligned_cols=150 Identities=13% Similarity=0.150 Sum_probs=93.8
Q ss_pred eeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEE
Q 016446 165 VPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFL 244 (389)
Q Consensus 165 ~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~la 244 (389)
..|-+-|+.++.....-+ ...+-+...|....||... ..+++|.|+++.+.++...=.++-+..==.+|+ .|+
T Consensus 49 ~~VvIiDl~n~~~~~Rrp----i~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~--~L~ 121 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRP----ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN--TVA 121 (365)
T ss_dssp EEEEEEETTSTTSCEEEE----CCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSS--EEE
T ss_pred CEEEEEECCCCCCccccc----cccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCC--eEE
Confidence 356666776654332211 0111122224344444454 799999999999998875444332222211444 355
Q ss_pred EEcCCeEEEEeCCC--cEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEe
Q 016446 245 TFRNRTVAVWNFRG--ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKI 322 (389)
Q Consensus 245 S~sD~tIklWd~~G--~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl 322 (389)
=..+..|--|+++| +.++-++-|... .+|.|-.-..+||.++++-.+-.. -.+.-.|.+-|+.++ .+.-+.|
T Consensus 122 lVT~taVyHWs~~~~s~P~kvFdR~~~L-~~~QIInY~~d~~~kW~~l~GI~~----~~~~v~G~mQLYS~e-r~~sQ~i 195 (365)
T 2xzh_A 122 LVTDNAVYHWSMEGESQPVKMFDRHSSL-AGCQIINYRTDAKQKWLLLTGISA----QQNRVVGAMQLYSVD-RKVSQPI 195 (365)
T ss_dssp EEESSEEEEEESSTTCCCEEEEECCGGG-TTCEEEEEEECTTSCEEEEEEEEE----ETTEEEEEEEEEETT-TTEEEEE
T ss_pred EEcCCcEEEEcccCCCCCceeeecchhc-ccceEEEEEECCCCCEEEEEeEec----cCCccceeEEEEeec-cccccee
Confidence 45588999999975 678888888765 357788889999999887665311 001224789999977 4566889
Q ss_pred cCCCC
Q 016446 323 NATNC 327 (389)
Q Consensus 323 ~gH~~ 327 (389)
.||..
T Consensus 196 eGhaa 200 (365)
T 2xzh_A 196 EGHAA 200 (365)
T ss_dssp CCSEE
T ss_pred eeeee
Confidence 99973
No 336
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=82.81 E-value=49 Score=34.49 Aligned_cols=255 Identities=8% Similarity=-0.010 Sum_probs=137.6
Q ss_pred ccEEEEEee-ccEEEEEecCceEEEEecccceeeeeee---cCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeee
Q 016446 4 TKVIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLN---VSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 79 (389)
Q Consensus 4 ~~v~~i~~~-~~~~a~~~~~gtiklW~~~tg~~l~tl~---~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~ 79 (389)
+.|.+|..- ...|=.+..+|..| +| |.....+. .-..+.|.+++-.++|...+. ..+ -+.
T Consensus 22 n~V~~I~qD~~G~lWigT~~GL~r-yD---G~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-----T~~-------Gl~ 85 (758)
T 3ott_A 22 SVVSCFLQDSEGLIWIGSNKGLFS-YD---GYSTQQHFTYGENNNTRIYCGVIIDNTYLYMG-----TDN-------GIL 85 (758)
T ss_dssp CCEEEEEECTTSCEEEEESSCEEE-EC---SSCEEECSCTTSTTSSCEEEEEEETTTEEEEE-----ETT-------EEE
T ss_pred ceEEEEEECCCCCEEEEECCCccc-cC---CCceEEEEccCCCCCceEEEEEEcCCCcEEEE-----eCC-------CeE
Confidence 457777766 44555666777664 44 32222221 111357899888888875544 122 233
Q ss_pred EeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEE------ecCCcEEEEEEc-CC
Q 016446 80 IEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS------ISDKHVQEIKIS-PG 152 (389)
Q Consensus 80 l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~t------l~~~~V~~vafS-~g 152 (389)
..|..++++.. . .......+..+.. .+|.+.+. +.+ -+..+|..+++...- +....|.++... +|
T Consensus 86 ~yd~~~~~f~~--~--~~~~~~~i~~i~~--~~g~lWig-t~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g 157 (758)
T 3ott_A 86 VYNYRADRYEQ--P--ETDFPTDVRTMAL--QGDTLWLG-ALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDN 157 (758)
T ss_dssp EEETTTTEECC--C--SCCCCSCEEEEEE--ETTEEEEE-ETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTC
T ss_pred EEeCCCCEEEC--c--ccCCCceEEEEEe--cCCcEEEE-cCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCC
Confidence 44544433211 0 0001112344543 36876664 344 566788877664322 224579998887 55
Q ss_pred ceEEEEecCCCCeeEEEEEcCCCeEEEEEeecC------CceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEccc
Q 016446 153 IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLL------HRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT 226 (389)
Q Consensus 153 ~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~------~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~g 226 (389)
.+.+ +.. .-+..+|..+++.. .+.... ..+.++... ..++.|-++.. +-+..+|..+++......-
T Consensus 158 ~lWi-gt~----~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d-~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l 229 (758)
T 3ott_A 158 QIYV-GTY----NGLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLED-TTRQCVWIGTE-GYLFQYFPSTGQIKQTEAF 229 (758)
T ss_dssp CEEE-EET----TEEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEE-TTTTEEEEEEE-EEEEEEETTTTEEEEEEEE
T ss_pred CEEE-EeC----CCHhhCccCCCceE-EecCCCccccccceeEEEEEE-CCCCEEEEEEC-CCCeEEcCCCCeEEeccCC
Confidence 5554 322 23677887776643 222110 124444432 23455555554 3577889888765432211
Q ss_pred CCCceEEEEEcCCCcEEEEEcCCeEEEEeCCCcEEEEeccCc---CCcCCCCeeEEEECCCCCEEEEE
Q 016446 227 EFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHL---LWHPDCNTNNIYITSDQDLIISY 291 (389)
Q Consensus 227 h~~~v~sv~fspdg~~laS~sD~tIklWd~~G~~l~tl~gh~---~~~~~~~v~sv~fSpdG~~laS~ 291 (389)
....|.+++..++|.+.+...+ -+-+++.+...+..+.... ...+...|+++...++|.+-+..
T Consensus 230 ~~~~i~~i~~d~~g~lWigT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT 296 (758)
T 3ott_A 230 HNNSIKSLALDGNGDLLAGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGT 296 (758)
T ss_dssp EEEEEEEEEECTTCCEEEEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEE
T ss_pred CCCeEEEEEEcCCCCEEEEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEe
Confidence 2346888888889998876534 4667887633333332111 11122348999999999887743
No 337
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.69 E-value=3.8 Score=45.20 Aligned_cols=34 Identities=26% Similarity=0.207 Sum_probs=29.3
Q ss_pred eEEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEe
Q 016446 105 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI 139 (389)
Q Consensus 105 ~v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl 139 (389)
+++.. ++..+|.+-+.|+++|+|++.+|+|+.+.
T Consensus 240 ~~~~~-~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 240 SMIFL-STYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp EEEEE-TTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEeec-CCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 45665 67789999999999999999999999875
No 338
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=82.10 E-value=56 Score=34.67 Aligned_cols=248 Identities=8% Similarity=0.007 Sum_probs=130.3
Q ss_pred EEEE-EeeCCCEEEEEEEeecCCCcceeeeeeeEeEeccCCCCCcceeEeeeccc----Cc--eeEEEecCCCeEEEE--
Q 016446 48 RSLF-YNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLK----WP--GFVEFDDVNGKVLTY-- 118 (389)
Q Consensus 48 ~sv~-~spdg~~l~s~s~~~~~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~~----~~--~~v~Fs~pdG~~Las-- 118 (389)
..+. ++|||+.++.+...++.| -..+++.|+.+|+.... .|..+... ++ ..+++- ++...+.+
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d-----~~~~~~~d~~t~~~~~~--~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~ 203 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKD-----EMFFREWDLEKKDFVKN--GFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLV 203 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCS-----EEEEEEEETTTTEECTT--CSCCBCTTCCBCCEETCCEEEE-ETTEEEECCC
T ss_pred eceeecCCCCCEEEEEeCCCCCc-----eeEEEEEECCcCCcCCC--CcccccccccccccccceeeEE-CCCEEEEEeC
Confidence 3455 899999877777777777 36678899999876321 11100000 00 112443 22233332
Q ss_pred --------ecCCCeEEEEeCCCCe----EEEEecCCcE-EEEEEc-CCc-----eEEEEecCCCCeeEEEEEcCC--CeE
Q 016446 119 --------SAQDSIYKVFDLKNYT----MLYSISDKHV-QEIKIS-PGI-----MLLIFNRSSSHVPLKILSIED--GTV 177 (389)
Q Consensus 119 --------~s~D~tiklWdl~~g~----~l~tl~~~~V-~~vafS-~g~-----~la~~~~~s~d~tiklWd~~t--G~~ 177 (389)
.+.-.+|++|.+-+.. +++.-....+ .++..+ +++ .+++.+.+-....+.+.++.. |+.
T Consensus 204 ~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 283 (711)
T 4hvt_A 204 LHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKL 283 (711)
T ss_dssp CSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEE
T ss_pred CCCCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcc
Confidence 2235789999886542 4555553332 345555 544 233332232235566666543 553
Q ss_pred EEEEeecCCceeEEEEEecCCCeEEE-E-e---------CCCcEEEEECCCCe-------EEEE-c-ccCCCceEEEEEc
Q 016446 178 LKVFYHLLHRNKKVDFIEQFNEKLLV-K-Q---------ENENLQILDVRNAE-------LMEV-S-RTEFMTPSAFIFL 237 (389)
Q Consensus 178 l~tl~~~~~~~~~v~f~~~~~~~l~~-~-s---------~D~tIklWd~~tg~-------~~~~-l-~gh~~~v~sv~fs 237 (389)
..+.. .....+... + ++.+++ . + ..+.|-..|+.++. ..+. + ......+..+++.
T Consensus 284 -~~l~~--~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 358 (711)
T 4hvt_A 284 -QKINM--PSDATLQGS-F-KEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTT 358 (711)
T ss_dssp -EECCS--CTTCEEEEE-E-TTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEEC
T ss_pred -eEeec--CCcceEeee-E-CCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEE
Confidence 33321 222333222 2 445554 2 1 35678888887742 1222 3 2334477888888
Q ss_pred CCCcEEEEEc-CC--eEEEEeCC-Cc-EEEE-eccCcCCcCCCCeeEEEECCCCCE-EEEEecCCCcccccCCCCCeEEE
Q 016446 238 YENQLFLTFR-NR--TVAVWNFR-GE-LVTS-FEDHLLWHPDCNTNNIYITSDQDL-IISYCKAEPEDQWMEGSAGSINV 310 (389)
Q Consensus 238 pdg~~laS~s-D~--tIklWd~~-G~-~l~t-l~gh~~~~~~~~v~sv~fSpdG~~-laS~s~D~~~~~~~~s~D~tIkl 310 (389)
++ .++++.. |+ .+.++|+. |+ .++. +.-... +.+..+.+++++.. +++.+.. ..-.++..
T Consensus 359 ~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~----~~~~~~~~~~~~~~~~~~~ss~--------~~P~~~~~ 425 (711)
T 4hvt_A 359 KD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQ----NAIFGMSSYEEEEEALITIENS--------IVPPTIYL 425 (711)
T ss_dssp SS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCST----TCEEEEECCTTCSCEEEEEECS--------SSCCEEEE
T ss_pred CC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCC----eEEEEEeecCcCCEEEEEEecC--------CCCCEEEE
Confidence 77 5677776 76 46677774 64 2333 221100 12566777888754 4444432 34578888
Q ss_pred EeCCCCeEEEEec
Q 016446 311 SSILTGKCLAKIN 323 (389)
Q Consensus 311 Wd~~tg~~l~tl~ 323 (389)
.|+. |+. ..|.
T Consensus 426 ~d~~-~~~-~~l~ 436 (711)
T 4hvt_A 426 WVKT-HEL-KIIR 436 (711)
T ss_dssp ECTT-SCE-EEEE
T ss_pred EeCC-CcE-EEEe
Confidence 9976 543 3444
No 339
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=81.25 E-value=21 Score=33.14 Aligned_cols=198 Identities=9% Similarity=0.028 Sum_probs=98.5
Q ss_pred CCeEEEEecC-C---------CeEEEEeCCCCeE--EEEec-C--CcEEEEEEcCCceEEEEecCCC-------------
Q 016446 112 NGKVLTYSAQ-D---------SIYKVFDLKNYTM--LYSIS-D--KHVQEIKISPGIMLLIFNRSSS------------- 163 (389)
Q Consensus 112 dG~~Las~s~-D---------~tiklWdl~~g~~--l~tl~-~--~~V~~vafS~g~~la~~~~~s~------------- 163 (389)
++++.+.|+. + ..+.++|+.+.+= +..+. . ..-.+++ .++.+.+.+..+..
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~ 143 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAG 143 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcC
Confidence 6888888886 2 4678888877662 22222 1 1122222 46666666643311
Q ss_pred -----------------------CeeEEEEEcCCCeEEEEEeecCCc-e-eEEEEEecCCCeEEEEeC------CCcEEE
Q 016446 164 -----------------------HVPLKILSIEDGTVLKVFYHLLHR-N-KKVDFIEQFNEKLLVKQE------NENLQI 212 (389)
Q Consensus 164 -----------------------d~tiklWd~~tG~~l~tl~~~~~~-~-~~v~f~~~~~~~l~~~s~------D~tIkl 212 (389)
-..+..+|+.+.+-...-.-...+ . ..++. ..+..++.|+. ...+.+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~ 221 (357)
T 2uvk_A 144 KDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVN--KGDKTWLINGEAKPGLRTDAVFE 221 (357)
T ss_dssp TCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEE--ETTEEEEECCEEETTEECCCEEE
T ss_pred CcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEE--ECCEEEEEeeecCCCcccCceEE
Confidence 147889999886644322111111 1 23333 23444555653 245677
Q ss_pred EEC--CCCeEEEEcc--cCCCceEEEEEcCCCcEEEEEc-C----------------------CeEEEEeCC-C--cEEE
Q 016446 213 LDV--RNAELMEVSR--TEFMTPSAFIFLYENQLFLTFR-N----------------------RTVAVWNFR-G--ELVT 262 (389)
Q Consensus 213 Wd~--~tg~~~~~l~--gh~~~v~sv~fspdg~~laS~s-D----------------------~tIklWd~~-G--~~l~ 262 (389)
+|+ ++.+-.+... .........+...++++++-|+ + ..+.++|++ . +.+.
T Consensus 222 ~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 301 (357)
T 2uvk_A 222 LDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG 301 (357)
T ss_dssp EECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE
T ss_pred EEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCC
Confidence 877 5555443211 1111111123345778877775 3 257788986 3 3343
Q ss_pred EeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecC
Q 016446 263 SFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 324 (389)
Q Consensus 263 tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~g 324 (389)
.+..... ...++..++++++-|+.+.. +..-..|-+.++.+++.+..-.-
T Consensus 302 ~~p~~r~-------~~~~~~~~~~i~v~GG~~~~-----~~~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 302 ELSQGRA-------YGVSLPWNNSLLIIGGETAG-----GKAVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp ECSSCCB-------SSEEEEETTEEEEEEEECGG-----GCEEEEEEEEEC-CCSCEEEC--
T ss_pred CCCCCcc-------cceeEEeCCEEEEEeeeCCC-----CCEeeeEEEEEEcCcEeEeeecc
Confidence 3332111 12233458999999987520 00013455569888887765443
No 340
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=80.91 E-value=3.9 Score=42.85 Aligned_cols=67 Identities=9% Similarity=0.145 Sum_probs=44.5
Q ss_pred eEEEECCCCCEEEEEecCCCccc---ccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCcccccccccee
Q 016446 277 NNIYITSDQDLIISYCKAEPEDQ---WMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIR 353 (389)
Q Consensus 277 ~sv~fSpdG~~laS~s~D~~~~~---~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (389)
-.|+|+|+|.+++.- |....+ ...--...+-.-+..+|+..+-+.++.+
T Consensus 479 DNL~fd~~G~LwI~e--Dg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g-------------------------- 530 (592)
T 3zwu_A 479 DGLGFDKAGRLWILT--DGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG-------------------------- 530 (592)
T ss_dssp EEEEECTTCCEEEEE--CCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT--------------------------
T ss_pred cceEECCCCCEEEEe--cCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC--------------------------
Confidence 469999999988763 310000 0000012344456678888888888763
Q ss_pred cccccccCCEEEEEECCCCCEEEEe
Q 016446 354 STVGEALEDITSLFYDEERNEIYTG 378 (389)
Q Consensus 354 ~~~~~~~~~V~svafSpdg~~LaSg 378 (389)
..++.++|+|||++|...
T Consensus 531 -------aE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 531 -------CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp -------CEEEEEEECTTSSEEEEE
T ss_pred -------ccCcCeeECCCCCEEEEE
Confidence 489999999999999765
No 341
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=79.82 E-value=6.6 Score=41.09 Aligned_cols=71 Identities=8% Similarity=0.112 Sum_probs=44.5
Q ss_pred eeEEEECCCCCEEEEEecCCC-cccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceec
Q 016446 276 TNNIYITSDQDLIISYCKAEP-EDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRS 354 (389)
Q Consensus 276 v~sv~fSpdG~~laS~s~D~~-~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (389)
-..|+|.|+|.+.+....... .....+-..+.+...+..+|+....+.+...
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~--------------------------- 530 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG--------------------------- 530 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTT---------------------------
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCC---------------------------
Confidence 478999999999884211000 0000000112566667777887766655431
Q ss_pred ccccccCCEEEEEECCCCCEEEEec
Q 016446 355 TVGEALEDITSLFYDEERNEIYTGN 379 (389)
Q Consensus 355 ~~~~~~~~V~svafSpdg~~LaSgs 379 (389)
..++.++||||+++|+.+-
T Consensus 531 ------aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 531 ------CEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp ------CEEEEEEECTTSSEEEEEE
T ss_pred ------ccccCCEECCCCCEEEEEE
Confidence 3689999999999998764
No 342
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=79.66 E-value=4.2 Score=39.55 Aligned_cols=111 Identities=14% Similarity=0.164 Sum_probs=63.9
Q ss_pred CCeEEEEeCCCcEEEEECCCCeEEEEcccC-CCceEEEE---EcCCCcEEEEE-c-CCeEEEEeCC-CcEEEEeccCcCC
Q 016446 198 NEKLLVKQENENLQILDVRNAELMEVSRTE-FMTPSAFI---FLYENQLFLTF-R-NRTVAVWNFR-GELVTSFEDHLLW 270 (389)
Q Consensus 198 ~~~l~~~s~D~tIklWd~~tg~~~~~l~gh-~~~v~sv~---fspdg~~laS~-s-D~tIklWd~~-G~~l~tl~gh~~~ 270 (389)
++.+++++.||.|.-.|.++|+.+-.++.. ..++.... ...++..++-. . ||.+-.++.+ |.....+.-....
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 357788899999999999999998887654 11222110 00133444432 3 7777667764 5433322211000
Q ss_pred cCCCCeeEEEE------------CCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecC
Q 016446 271 HPDCNTNNIYI------------TSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 324 (389)
Q Consensus 271 ~~~~~v~sv~f------------SpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~g 324 (389)
. ...+.+ +-+| .+..|+.+ +++.--|+.||+.+.++..
T Consensus 90 -~---~SP~~~~~~pvv~~~~~~~~~g-~Vy~Gs~~-----------g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 90 -S---TSPLHLKTNIVVNDSGKIVEDE-KVYTGSMR-----------TIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp -T---TCSEEEECC----------CCE-EEEECEEE-----------EEEEEEETTTCCEEEEEST
T ss_pred -e---ccccccCCCceeecccccccCC-EEEEEecC-----------CEEEEEECCCCcEEEEEec
Confidence 0 001111 1344 45556554 8999999999999999864
No 343
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=79.32 E-value=37 Score=30.93 Aligned_cols=190 Identities=12% Similarity=0.045 Sum_probs=96.1
Q ss_pred EEEEecCCCeEEEEeCCCCeE-EEEecC---CcEEEEEEcCCceEEEEec----CCC----CeeEEEEEcCCCeEEEEEe
Q 016446 115 VLTYSAQDSIYKVFDLKNYTM-LYSISD---KHVQEIKISPGIMLLIFNR----SSS----HVPLKILSIEDGTVLKVFY 182 (389)
Q Consensus 115 ~Las~s~D~tiklWdl~~g~~-l~tl~~---~~V~~vafS~g~~la~~~~----~s~----d~tiklWd~~tG~~l~tl~ 182 (389)
+++.|+ ..+..+|..+++- ...+.. ..-.+++..++..++.+.. .+. ...+..+|..+++-.. +.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-MP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-CC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-CC
Confidence 444555 5677888888773 233321 2223344446777766652 111 1237788988876432 22
Q ss_pred ec-CCce-eEEEEEecCCCeEEEEeCC--------CcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc--C--
Q 016446 183 HL-LHRN-KKVDFIEQFNEKLLVKQEN--------ENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR--N-- 248 (389)
Q Consensus 183 ~~-~~~~-~~v~f~~~~~~~l~~~s~D--------~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s--D-- 248 (389)
.. ..+. ..++. .++..++.|+.+ ..+.++|..+++-.+.-.-....-...+...++++++-|+ +
T Consensus 84 ~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 161 (315)
T 4asc_A 84 PLPSPRCLFGLGE--ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDR 161 (315)
T ss_dssp CBSSCEESCEEEE--ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTS
T ss_pred CCCcchhceeEEE--ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCC
Confidence 11 1111 12222 234455556632 5689999998875443211111111112235777777775 2
Q ss_pred ---CeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEE
Q 016446 249 ---RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCL 319 (389)
Q Consensus 249 ---~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l 319 (389)
..+..+|.....-..+..-..+. ..-..+. -++++++.|+.+.. +.-..+.++|+.+.+-.
T Consensus 162 ~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~--~~~~iyv~GG~~~~------~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 162 KCLNKMCVYDPKKFEWKELAPMQTAR--SLFGATV--HDGRIIVAAGVTDT------GLTSSAEVYSITDNKWA 225 (315)
T ss_dssp CBCCCEEEEETTTTEEEECCCCSSCC--BSCEEEE--ETTEEEEEEEECSS------SEEEEEEEEETTTTEEE
T ss_pred cccceEEEEeCCCCeEEECCCCCCch--hceEEEE--ECCEEEEEeccCCC------CccceEEEEECCCCeEE
Confidence 46888888633333332111110 1112222 38899898876520 11136888998877543
No 344
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=79.13 E-value=70 Score=33.93 Aligned_cols=193 Identities=12% Similarity=0.067 Sum_probs=96.4
Q ss_pred EE-EecCCCeEEEEe-----cCCCeEEEEeCCCCeEEE-Eec----CCcEEEE-----EEcCCceEEEEe--------cC
Q 016446 106 VE-FDDVNGKVLTYS-----AQDSIYKVFDLKNYTMLY-SIS----DKHVQEI-----KISPGIMLLIFN--------RS 161 (389)
Q Consensus 106 v~-Fs~pdG~~Las~-----s~D~tiklWdl~~g~~l~-tl~----~~~V~~v-----afS~g~~la~~~--------~~ 161 (389)
+. |+ |||++++.+ |+-.++|++|+++++.+- .+. .+.+..+ ++-|++.+..+. ..
T Consensus 134 ~~~~~-~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~ 212 (711)
T 4hvt_A 134 VSNCF-QNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSS 212 (711)
T ss_dssp EEECS-SSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTT
T ss_pred eeecC-CCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcC
Confidence 44 86 888877643 345589999999998752 122 0001112 333344443321 11
Q ss_pred CCCeeEEEEEcCCCeE--EEEEeecCCce-eEEEEEecCCCe----EEE-Ee---CCCcEEEEECCC--CeEEEEcccCC
Q 016446 162 SSHVPLKILSIEDGTV--LKVFYHLLHRN-KKVDFIEQFNEK----LLV-KQ---ENENLQILDVRN--AELMEVSRTEF 228 (389)
Q Consensus 162 s~d~tiklWd~~tG~~--l~tl~~~~~~~-~~v~f~~~~~~~----l~~-~s---~D~tIklWd~~t--g~~~~~l~gh~ 228 (389)
+.-.+|++|.+-|.+. ...+.+....+ ..+. ..++++. +++ .+ ....+.+-|... ++..+....-.
T Consensus 213 ~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 291 (711)
T 4hvt_A 213 LYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAG-KLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSD 291 (711)
T ss_dssp SSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEE-ESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTT
T ss_pred CCCCEEEEEECCCChHHCeEEeccCCCceEEEEE-EecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCc
Confidence 1235789998755431 22333222222 1122 2244442 333 33 224455556653 65444432222
Q ss_pred CceEEEEEcCCCcEEEEEc-----------CCeEEEEeCC-Cc-------EEEE-eccCcCCcCCCCeeEEEECCCCCEE
Q 016446 229 MTPSAFIFLYENQLFLTFR-----------NRTVAVWNFR-GE-------LVTS-FEDHLLWHPDCNTNNIYITSDQDLI 288 (389)
Q Consensus 229 ~~v~sv~fspdg~~laS~s-----------D~tIklWd~~-G~-------~l~t-l~gh~~~~~~~~v~sv~fSpdG~~l 288 (389)
..+..++++++++... .+.|-..|+. +. -.++ +..... ..+.++++++| .++
T Consensus 292 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~-~l~ 363 (711)
T 4hvt_A 292 ---ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTAN----EVFNFISTTKD-RVF 363 (711)
T ss_dssp ---CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTT----EEEEEEEECSS-CEE
T ss_pred ---ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCC----CeEEEEEEECC-EEE
Confidence 1234566888777442 3456666664 21 1222 322221 23678888876 677
Q ss_pred EEEecCCCcccccCCCCCeEEEEeCCCCe
Q 016446 289 ISYCKAEPEDQWMEGSAGSINVSSILTGK 317 (389)
Q Consensus 289 aS~s~D~~~~~~~~s~D~tIklWd~~tg~ 317 (389)
++...+. ...|+++|+.+|+
T Consensus 364 ~~~~~~~---------~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 364 LATYDNV---------VAKVVTFTLENEQ 383 (711)
T ss_dssp EEEEETT---------EEEEEEECEETTE
T ss_pred EEEEECC---------EEEEEEEECCCCc
Confidence 7766541 1357788877775
No 345
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=78.46 E-value=6.2 Score=41.35 Aligned_cols=59 Identities=15% Similarity=0.238 Sum_probs=43.8
Q ss_pred ceEEEEEcCCCcEEEEEc-C------------CeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEe
Q 016446 230 TPSAFIFLYENQLFLTFR-N------------RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYC 292 (389)
Q Consensus 230 ~v~sv~fspdg~~laS~s-D------------~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s 292 (389)
.+--|+|+|+|++++.-. + ..+-.-+.. |++.+-|.++.. |.+..++|||||++|...-
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g----aE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG----CEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT----CEEEEEEECTTSSEEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC----ccCcCeeECCCCCEEEEEE
Confidence 467799999999887653 2 123333554 888888887644 6799999999999998754
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=77.79 E-value=26 Score=36.73 Aligned_cols=125 Identities=10% Similarity=0.144 Sum_probs=77.4
Q ss_pred eEEEEEecCCCeEEEEe-CCCcEEEEECCC------CeE-------EEEcccCCCceEEEEEcCCCcEEEEEc-CCeEEE
Q 016446 189 KKVDFIEQFNEKLLVKQ-ENENLQILDVRN------AEL-------MEVSRTEFMTPSAFIFLYENQLFLTFR-NRTVAV 253 (389)
Q Consensus 189 ~~v~f~~~~~~~l~~~s-~D~tIklWd~~t------g~~-------~~~l~gh~~~v~sv~fspdg~~laS~s-D~tIkl 253 (389)
..|.++ |||.++++++ .+.|+-+.|++. +++ ....+ -.-.+.-.+|.++|....|-- |..|--
T Consensus 326 HGv~vs-PDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 326 HGCNTS-SDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp CCEEEC-TTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred cceeeC-CCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEE
Confidence 456665 8898888876 899999999974 111 11222 223566688999996666666 999999
Q ss_pred EeCC-C----------cEEEEeccCcCCcCCCCeeEEEE------CCCCCEEEEEecCCCcccccCC--CCCeEEEEeCC
Q 016446 254 WNFR-G----------ELVTSFEDHLLWHPDCNTNNIYI------TSDQDLIISYCKAEPEDQWMEG--SAGSINVSSIL 314 (389)
Q Consensus 254 Wd~~-G----------~~l~tl~gh~~~~~~~~v~sv~f------SpdG~~laS~s~D~~~~~~~~s--~D~tIklWd~~ 314 (389)
|+++ . ..+..+.-|..+ --+.- .|||++|+|.+.=..++..-.+ .-..-.|.||.
T Consensus 404 Wni~~a~~~~~g~~~~~v~~k~dv~Yqp------GH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIs 477 (638)
T 3sbq_A 404 WNMEEAVRAYKGEKVNYIKQKLDVHYQP------GHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDIS 477 (638)
T ss_dssp EEHHHHHHHHTTCCCCCEEEEEECSSCE------EEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECS
T ss_pred EeccHHHHHhcCccCCeeeeccccccCC------cccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecC
Confidence 9975 3 356666655432 12222 6899999999863211110000 01344788874
Q ss_pred CCeEEEEe
Q 016446 315 TGKCLAKI 322 (389)
Q Consensus 315 tg~~l~tl 322 (389)
|.-+.-+
T Consensus 478 -GdkM~lv 484 (638)
T 3sbq_A 478 -GDEMKLV 484 (638)
T ss_dssp -SSSCEEE
T ss_pred -CCceEEE
Confidence 5544444
No 347
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=77.45 E-value=2.7 Score=45.15 Aligned_cols=36 Identities=6% Similarity=-0.035 Sum_probs=31.4
Q ss_pred EEEEEeeccEEEEEecCceEEEEecccceeeeeeec
Q 016446 6 VIEIVAARDIVFALAHSGVCAAFSRETNRRICFLNV 41 (389)
Q Consensus 6 v~~i~~~~~~~a~~~~~gtiklW~~~tg~~l~tl~~ 41 (389)
|..+.+...++++++.|+++|+|++.+|+++.+..-
T Consensus 224 Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 555566678999999999999999999999998776
No 348
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=74.91 E-value=2.3 Score=47.65 Aligned_cols=37 Identities=14% Similarity=0.277 Sum_probs=31.9
Q ss_pred eeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEec
Q 016446 276 TNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKIN 323 (389)
Q Consensus 276 v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~ 323 (389)
+.+++..+|.++|++=|.| +++||||+.+|+|+.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D-----------~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLD-----------YKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTT-----------CEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCC-----------CEEEEEECCCCCeEEeec
Confidence 4567788999999998875 899999999999998853
No 349
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=71.03 E-value=62 Score=29.45 Aligned_cols=191 Identities=9% Similarity=-0.000 Sum_probs=94.5
Q ss_pred eEEEEecCCCeEEEEeCCCCeEE-EEec---CCcEEEEEEcCCceEEEEecC----CC----CeeEEEEEcCCCeEEEEE
Q 016446 114 KVLTYSAQDSIYKVFDLKNYTML-YSIS---DKHVQEIKISPGIMLLIFNRS----SS----HVPLKILSIEDGTVLKVF 181 (389)
Q Consensus 114 ~~Las~s~D~tiklWdl~~g~~l-~tl~---~~~V~~vafS~g~~la~~~~~----s~----d~tiklWd~~tG~~l~tl 181 (389)
.+++.|+. .+..+|..+.+-. ..+. ...-.+++..++..++.+... .. ...+..+|..+++-...-
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 45555553 4778888887732 2332 122334444467777666421 10 112777898887643321
Q ss_pred eecCCce-eEEEEEecCCCeEEEEeCC-------CcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEc-C----
Q 016446 182 YHLLHRN-KKVDFIEQFNEKLLVKQEN-------ENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR-N---- 248 (389)
Q Consensus 182 ~~~~~~~-~~v~f~~~~~~~l~~~s~D-------~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~s-D---- 248 (389)
.-...+. ..++. .++..++.|+.+ ..+.++|..+.+-.+.-.-....-...+...++++++-|+ +
T Consensus 95 ~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 172 (318)
T 2woz_A 95 PLPSARCLFGLGE--VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKK 172 (318)
T ss_dssp CBSSCBCSCEEEE--ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSC
T ss_pred CCCccccccceEE--ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCC
Confidence 1111111 22222 235555567643 3578889988775543211000000011225788877775 2
Q ss_pred --CeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeE
Q 016446 249 --RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKC 318 (389)
Q Consensus 249 --~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~ 318 (389)
..+..+|.....-..+..-..+ -..-..+. -++++++.|+.+.. ..-..+.++|+.+.+-
T Consensus 173 ~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~--~~~~iyv~GG~~~~------~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 173 CTNRVFIYNPKKGDWKDLAPMKTP--RSMFGVAI--HKGKIVIAGGVTED------GLSASVEAFDLKTNKW 234 (318)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSC--CBSCEEEE--ETTEEEEEEEEETT------EEEEEEEEEETTTCCE
T ss_pred ccceEEEEcCCCCEEEECCCCCCC--cccceEEE--ECCEEEEEcCcCCC------CccceEEEEECCCCeE
Confidence 3588889863333333211111 01112233 37888888875420 0114677899887654
No 350
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=69.14 E-value=1.1e+02 Score=31.81 Aligned_cols=201 Identities=12% Similarity=0.064 Sum_probs=107.6
Q ss_pred CCCeEEEEecCC----CeEEEEeCCCCeE--EE-E-----ecC--CcEEEEEEc-CCceEEEEecCCCC---eeEEEEEc
Q 016446 111 VNGKVLTYSAQD----SIYKVFDLKNYTM--LY-S-----ISD--KHVQEIKIS-PGIMLLIFNRSSSH---VPLKILSI 172 (389)
Q Consensus 111 pdG~~Las~s~D----~tiklWdl~~g~~--l~-t-----l~~--~~V~~vafS-~g~~la~~~~~s~d---~tiklWd~ 172 (389)
.++++++.|+.+ ..+.++|+.+++- +. . +.. ..-..++++ +|..++.++..+.. ..+.++|+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 467888888854 4577888877762 22 2 221 123345555 67766666544322 46788898
Q ss_pred CCCeEEEEEeecCCce-eEEEEEecCCCeEEEEeCCC--cEEEEECCCCeEEEEcc-----cCCCceEEEEEcCC-CcEE
Q 016446 173 EDGTVLKVFYHLLHRN-KKVDFIEQFNEKLLVKQENE--NLQILDVRNAELMEVSR-----TEFMTPSAFIFLYE-NQLF 243 (389)
Q Consensus 173 ~tG~~l~tl~~~~~~~-~~v~f~~~~~~~l~~~s~D~--tIklWd~~tg~~~~~l~-----gh~~~v~sv~fspd-g~~l 243 (389)
.+.+-...-.-...+. ...+.. .++..++.|+.++ .+.+||..+.+-...-. .....-.++++..+ ++++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~-~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSL-PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEEC-TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCcccceEEEE-cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 8854332211111122 122221 2456666676433 79999999887544321 11112233556655 7788
Q ss_pred EEEc---C-----CeEEEEeCC-CcE-----EEEeccC--cCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCe
Q 016446 244 LTFR---N-----RTVAVWNFR-GEL-----VTSFEDH--LLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGS 307 (389)
Q Consensus 244 aS~s---D-----~tIklWd~~-G~~-----l~tl~gh--~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~t 307 (389)
+.|+ + ..+..||+. .+- ...+... ... .. .+++...|+++++.|+.+.... ...-..
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R---~~-~~~~~~~~~~iyv~GG~~~~~~---~~~~~~ 627 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQR---YG-SQIKYITPRKLLIVGGTSPSGL---FDRTNS 627 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCC---BS-CEEEEEETTEEEEECCBCSSCC---CCTTTS
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCc---cc-ceEEEeCCCEEEEECCccCCCC---CCCCCe
Confidence 8775 2 357888986 441 2233221 111 01 2333334488888887541000 012357
Q ss_pred EEEEeCCCCeEE
Q 016446 308 INVSSILTGKCL 319 (389)
Q Consensus 308 IklWd~~tg~~l 319 (389)
|.++|+.+.+..
T Consensus 628 v~~yd~~t~~W~ 639 (695)
T 2zwa_A 628 IISLDPLSETLT 639 (695)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEECCCCeEE
Confidence 999999887654
No 351
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=66.24 E-value=5.6 Score=42.71 Aligned_cols=32 Identities=3% Similarity=0.067 Sum_probs=27.2
Q ss_pred CCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecC
Q 016446 282 TSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 324 (389)
Q Consensus 282 SpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~g 324 (389)
.++..+|++=|.| .++|+||+.+|+|+++..=
T Consensus 228 ~~~~~fLftL~~D-----------h~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 228 LFHERYLIVLTQN-----------CHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EETTTEEEEEETT-----------CEEEEEETTTTEEEEEEET
T ss_pred ccCCcEEEEEEcC-----------CeEEEEEcCCCceEEeecc
Confidence 4468899998875 8999999999999988754
No 352
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=66.21 E-value=22 Score=37.26 Aligned_cols=62 Identities=18% Similarity=0.265 Sum_probs=43.8
Q ss_pred CCceEEEEEcCCCcEEE-EEcC------------CeEEEEeCC-CcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEec
Q 016446 228 FMTPSAFIFLYENQLFL-TFRN------------RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 293 (389)
Q Consensus 228 ~~~v~sv~fspdg~~la-S~sD------------~tIklWd~~-G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~ 293 (389)
...+..|+|.++|.+.+ +-.. ..|-..+.. |++.+-+.+... |.++.++||||+++|..+-.
T Consensus 475 fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~----aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 475 FNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG----CEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTT----CEEEEEEECTTSSEEEEEEE
T ss_pred cCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCC----ccccCCEECCCCCEEEEEEe
Confidence 35788899999999988 3221 134455664 887766654332 34799999999999988654
No 353
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=64.99 E-value=4.6 Score=45.29 Aligned_cols=29 Identities=10% Similarity=0.122 Sum_probs=26.1
Q ss_pred ccEEEEEecCceEEEEecccceeeeeeec
Q 016446 13 RDIVFALAHSGVCAAFSRETNRRICFLNV 41 (389)
Q Consensus 13 ~~~~a~~~~~gtiklW~~~tg~~l~tl~~ 41 (389)
..+|++.|.|+++|+|++.+|+|+.+..-
T Consensus 249 ~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 249 YNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp TTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred ccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 57899999999999999999999998554
No 354
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=62.28 E-value=91 Score=28.21 Aligned_cols=215 Identities=7% Similarity=-0.047 Sum_probs=100.5
Q ss_pred ceEEEEecccceee-eeeecCCcceEEEEEEeeCCCEEEEEEEeec-CCCcceeeeeeeEeEeccCCCCCcceeEeeecc
Q 016446 23 GVCAAFSRETNRRI-CFLNVSPDEVIRSLFYNKNNDSLITVSVYAS-DNFSSLKCRSTKIEYIRRGKPDSGFALFESESL 100 (389)
Q Consensus 23 gtiklW~~~tg~~l-~tl~~~~~~~v~sv~~spdg~~l~s~s~~~~-~d~~~l~~~~~~l~~i~~g~~~~~~~l~~~~~~ 100 (389)
..+..||..+++-. ..+.... .....-+...+++.++.+..... .....-....+..+|..+++......+- ....
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~ 90 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQV-PKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLP-SPRC 90 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCS-CSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBS-SCEE
T ss_pred CceEEECCCCCeEecCCCCCCC-CccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCC-cchh
Confidence 56778898776632 2222111 12222233457777766432111 1101111233555666555431100000 0011
Q ss_pred cCceeEEEecCCCeEEEEecCC--------CeEEEEeCCCCeE--EEEecCCc-EEEEEEcCCceEEEEecCCC---Cee
Q 016446 101 KWPGFVEFDDVNGKVLTYSAQD--------SIYKVFDLKNYTM--LYSISDKH-VQEIKISPGIMLLIFNRSSS---HVP 166 (389)
Q Consensus 101 ~~~~~v~Fs~pdG~~Las~s~D--------~tiklWdl~~g~~--l~tl~~~~-V~~vafS~g~~la~~~~~s~---d~t 166 (389)
.| +++. -++++++.|+.+ ..+.++|+.+.+- +..++... -.+++..++.+++.+..... -..
T Consensus 91 ~~--~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 166 (315)
T 4asc_A 91 LF--GLGE--ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNK 166 (315)
T ss_dssp SC--EEEE--ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCC
T ss_pred ce--eEEE--ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccce
Confidence 11 2333 268888888843 4688889887762 22222211 12233346666666543111 146
Q ss_pred EEEEEcCCCeEEEEEeecCCce-eEEEEEecCCCeEEEEeCCC-----cEEEEECCCCeEEEEcccC--CCceEEEEEcC
Q 016446 167 LKILSIEDGTVLKVFYHLLHRN-KKVDFIEQFNEKLLVKQENE-----NLQILDVRNAELMEVSRTE--FMTPSAFIFLY 238 (389)
Q Consensus 167 iklWd~~tG~~l~tl~~~~~~~-~~v~f~~~~~~~l~~~s~D~-----tIklWd~~tg~~~~~l~gh--~~~v~sv~fsp 238 (389)
+..+|+.+.+=...-.-...+. ..++. .++..++.|+.++ .+.++|+++.+-.+.-.-. ......+ .-
T Consensus 167 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~ 242 (315)
T 4asc_A 167 MCVYDPKKFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLV--SL 242 (315)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEE--EE
T ss_pred EEEEeCCCCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEE--EE
Confidence 8889988865332211111222 22222 2355555576443 5888999988765542211 1111222 23
Q ss_pred CCcEEEEEc
Q 016446 239 ENQLFLTFR 247 (389)
Q Consensus 239 dg~~laS~s 247 (389)
++++++.|+
T Consensus 243 ~~~l~v~GG 251 (315)
T 4asc_A 243 VGTLYAIGG 251 (315)
T ss_dssp TTEEEEEEE
T ss_pred CCEEEEECC
Confidence 678777775
No 355
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=62.05 E-value=1.2e+02 Score=29.61 Aligned_cols=208 Identities=9% Similarity=-0.005 Sum_probs=112.6
Q ss_pred cccCceeEEEecCCCeEEEE--ecCC-------------CeEEEEeCCCC--eEEEEec--------CCcEEEEEEc---
Q 016446 99 SLKWPGFVEFDDVNGKVLTY--SAQD-------------SIYKVFDLKNY--TMLYSIS--------DKHVQEIKIS--- 150 (389)
Q Consensus 99 ~~~~~~~v~Fs~pdG~~Las--~s~D-------------~tiklWdl~~g--~~l~tl~--------~~~V~~vafS--- 150 (389)
.+..+..+..+ +.|++-+- |-.+ -.|-+||+++. ++++++. ...+.++++-
T Consensus 85 ~lvsV~~v~iD-~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~ 163 (381)
T 3q6k_A 85 ELTSIYQPVID-DCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVAN 163 (381)
T ss_dssp SSSCEEEEEEC-TTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESC
T ss_pred ceEEeeEEEEc-CCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEeccc
Confidence 34455667775 56666442 2111 14668999998 8876552 2357888887
Q ss_pred C-----CceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEEEcc
Q 016446 151 P-----GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR 225 (389)
Q Consensus 151 ~-----g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~~l~ 225 (389)
| +.+..++ ++...-|-+.|+.+|+.-+.+..+...-....|. + .|+..+.
T Consensus 164 ~~~~c~~~~aYIt--D~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~--------------------i-~G~~~~~-- 218 (381)
T 3q6k_A 164 PKGDCSETFVYIT--NFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFD--------------------Y-GGKEYEF-- 218 (381)
T ss_dssp TTTTSCSEEEEEE--ETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEE--------------------E-TTEEEEE--
T ss_pred CCCCCCccEEEEE--cCCCCcEEEEECCCCcEEEEccCCCccccCcceE--------------------E-CCEEeEe--
Confidence 2 3455454 3445788899999999888773221111111121 1 2333321
Q ss_pred cCCCceEEEEEcCC----CcEEEEEcCCeEEEEeCC------C---cEEEEeccCcCCcCCCCeeEEEEC-CCCCEEEEE
Q 016446 226 TEFMTPSAFIFLYE----NQLFLTFRNRTVAVWNFR------G---ELVTSFEDHLLWHPDCNTNNIYIT-SDQDLIISY 291 (389)
Q Consensus 226 gh~~~v~sv~fspd----g~~laS~sD~tIklWd~~------G---~~l~tl~gh~~~~~~~~v~sv~fS-pdG~~laS~ 291 (389)
...+..+++||+ ++.|-=..=..-+++-+. . .-++.+ |...+..+ -...++. .+|.+..+-
T Consensus 219 --~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~--~~~~~~D~~~G~ly~~~ 293 (381)
T 3q6k_A 219 --KAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELL-GNRGKYND--AIALAYDPKTKVIFFAE 293 (381)
T ss_dssp --CCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEE-EECCTTCC--EEEEEECTTTCEEEEEE
T ss_pred --ccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEe-eecCCCCC--cceEEEeCCCCeEEEEe
Confidence 235889999998 666543331111234321 1 112222 22221111 1345664 567766654
Q ss_pred ecCCCcccccCCCCCeEEEEeCCCCe----EEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEE
Q 016446 292 CKAEPEDQWMEGSAGSINVSSILTGK----CLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLF 367 (389)
Q Consensus 292 s~D~~~~~~~~s~D~tIklWd~~tg~----~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~sva 367 (389)
- +...|..||..+.. -+.++- +. + .+.++..++
T Consensus 294 ~-----------~~~aI~~w~~~~~~~~~~n~~~l~-~d------------------------------~-~l~~pd~~~ 330 (381)
T 3q6k_A 294 A-----------NTKQVSCWNTQKMPLRMKNTDVVY-TS------------------------------S-RFVFGTDIS 330 (381)
T ss_dssp S-----------SSSEEEEEETTSCSBCGGGEEEEE-EC------------------------------T-TCCSEEEEE
T ss_pred c-----------cCCeEEEEeCCCCccccCceEEEE-EC------------------------------C-CccccCeEE
Confidence 3 34789999965311 122322 11 1 236899999
Q ss_pred ECCCCCEEEEecC
Q 016446 368 YDEERNEIYTGNR 380 (389)
Q Consensus 368 fSpdg~~LaSgs~ 380 (389)
+.+||.+.+..+.
T Consensus 331 i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 331 VDSKGGLWFMSNG 343 (381)
T ss_dssp ECTTSCEEEEECS
T ss_pred ECCCCeEEEEECc
Confidence 9999998877763
No 356
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=61.51 E-value=1.5e+02 Score=30.60 Aligned_cols=307 Identities=13% Similarity=0.048 Sum_probs=160.3
Q ss_pred cEEEEEeeccEEEEEecCceEEEEecccceeeeee----ecCCcceEEEEEEeeCCCEEEEEEEeecCCCcceeeeeeeE
Q 016446 5 KVIEIVAARDIVFALAHSGVCAAFSRETNRRICFL----NVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 80 (389)
Q Consensus 5 ~v~~i~~~~~~~a~~~~~gtiklW~~~tg~~l~tl----~~~~~~~v~sv~~spdg~~l~s~s~~~~~d~~~l~~~~~~l 80 (389)
.|..|...+..|-.+..+| +..++.++++.. .+ .+-..+.|.+++..++|...+.. .+ + +..
T Consensus 104 ~i~~i~~~~g~lWigt~~G-l~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWigt-----~~--G-----l~~ 169 (758)
T 3ott_A 104 DVRTMALQGDTLWLGALNG-LYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYVGT-----YN--G-----LCR 169 (758)
T ss_dssp CEEEEEEETTEEEEEETTE-EEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEEEE-----TT--E-----EEE
T ss_pred eEEEEEecCCcEEEEcCCc-ceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEEEe-----CC--C-----Hhh
Confidence 4666665656677777665 456787655543 23 11123578999988888866642 21 1 222
Q ss_pred eEeccCCCCCcceeEeee-----cccCceeEEEecCCCe-EEEEecCCCeEEEEeCCCCeEE--EEecCCcEEEEEEc-C
Q 016446 81 EYIRRGKPDSGFALFESE-----SLKWPGFVEFDDVNGK-VLTYSAQDSIYKVFDLKNYTML--YSISDKHVQEIKIS-P 151 (389)
Q Consensus 81 ~~i~~g~~~~~~~l~~~~-----~~~~~~~v~Fs~pdG~-~Las~s~D~tiklWdl~~g~~l--~tl~~~~V~~vafS-~ 151 (389)
.+...+++ ..+... ....+.++..+ ++|. +.+ |.. +-+..+|..+++.. ..+....|.++..- +
T Consensus 170 ~~~~~~~~----~~~~~~~~~~~~~~~i~~i~~d-~~~~~lWi-gt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~ 242 (758)
T 3ott_A 170 YIPSNGKF----EGIPLPVHSSQSNLFVNSLLED-TTRQCVWI-GTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGN 242 (758)
T ss_dssp EETTTTEE----EEECCCCCTTCSSCCEEEEEEE-TTTTEEEE-EEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTT
T ss_pred CccCCCce----EEecCCCccccccceeEEEEEE-CCCCEEEE-EEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCC
Confidence 22222221 001000 01124566665 5554 333 332 45777888777642 33445678998887 4
Q ss_pred CceEEEEecCCCCeeEEEEEcCCCeEEEEEeec--------CCceeEEEEEecCCCeEEEEeCCCcEEEEECCCCeEEE-
Q 016446 152 GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHL--------LHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELME- 222 (389)
Q Consensus 152 g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~--------~~~~~~v~f~~~~~~~l~~~s~D~tIklWd~~tg~~~~- 222 (389)
|.+. .+.. .-+.+++..+++.. .+... ...|.++..- ..+.|-+|...| +.+... ......
T Consensus 243 g~lW-igT~----~Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D--~~g~lWiGT~~G-l~~~~~-~~~~~~~ 312 (758)
T 3ott_A 243 GDLL-AGTD----NGLYVYHNDTTPLQ-HIIHDSRNIQSLTNNIIWNIFAD--QEHNIWLGTDYG-ISLSRY-NSALQFI 312 (758)
T ss_dssp CCEE-EEET----TEEEEECCTTSCCE-EECCCTTCTTSCSCSCEEEEEEC--TTCCEEEEESSS-EEEECC-CC-CEEE
T ss_pred CCEE-EEeC----CceeEEecCCCcEE-EEEcCCCCcCcCCcCeEEEEEEc--CCCCEEEEeCCc-cccccc-CCceeEE
Confidence 5544 4432 23777887776543 33211 1224444432 234555565556 444432 221111
Q ss_pred Ecc-----cCCCceEEEEEcCCCcEEEEEcCCeEEEEeCC-Cc--EEEEecc-C-cCCcCCCCeeEEEECCCCCEEEEEe
Q 016446 223 VSR-----TEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GE--LVTSFED-H-LLWHPDCNTNNIYITSDQDLIISYC 292 (389)
Q Consensus 223 ~l~-----gh~~~v~sv~fspdg~~laS~sD~tIklWd~~-G~--~l~tl~g-h-~~~~~~~~v~sv~fSpdG~~laS~s 292 (389)
... .....|.++.-.++|.+.+...+|-. .++.. ++ .+..+.. . ........|.+++-.++|++.+..
T Consensus 313 ~~~~~~~~~~~~~v~~i~~D~~g~lWiGt~~Gl~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt- 390 (758)
T 3ott_A 313 PISQITGTGDGNQFYSLFRDSKGFYWFGGANGLI-RFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIAT- 390 (758)
T ss_dssp EHHHHSCSCCCCBEEEEEECTTCCEEEEETTEEE-EESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEE-
T ss_pred ecccCCCCCCCceEEEEEEcCCCCEEEeeCCcce-eecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEe-
Confidence 110 12346888888889998876546544 45543 32 1222220 0 001111238899999999987743
Q ss_pred cCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCCCCCcccccCCCCCCCccccccccceecccccccCCEEEEEECCCC
Q 016446 293 KAEPEDQWMEGSAGSINVSSILTGKCLAKINATNCSPKVDDELGSSSTGKSKKLNKSSYIRSTVGEALEDITSLFYDEER 372 (389)
Q Consensus 293 ~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafSpdg 372 (389)
. +-|..+|..+++...-...... + . + ....|.++..+++|
T Consensus 391 ~------------~GL~~~~~~~~~~~~~~~~~~~----------~-~---------------~--~~~~v~~i~~d~~g 430 (758)
T 3ott_A 391 D------------GSINRYDYATRQFIHYNIVDNT----------G-T---------------Y--NTNWTYYIFEDTAG 430 (758)
T ss_dssp T------------TEEEEEETTTTEEEEEEEECCC----------------------------C--BSSSEEEEEECTTS
T ss_pred C------------CcHhhcCcCCCcEEEeecCCCc----------C-C---------------C--CCceEEEEEEcCCC
Confidence 2 5688999888876432211110 0 0 0 01479999999999
Q ss_pred CEEEEecCCCcE
Q 016446 373 NEIYTGNRHGLV 384 (389)
Q Consensus 373 ~~LaSgs~D~tI 384 (389)
++.+.....|..
T Consensus 431 ~lWigT~~~Gl~ 442 (758)
T 3ott_A 431 QLWISTCLGGIF 442 (758)
T ss_dssp EEEEEESSSCEE
T ss_pred CEEEEECCCceE
Confidence 877755444544
No 357
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=59.83 E-value=1.1e+02 Score=28.20 Aligned_cols=71 Identities=10% Similarity=0.001 Sum_probs=37.6
Q ss_pred CCCeEEEEecCC----------------------CeEEEEeCCCCe--EEEEecCCcE-EEEEEcCCceEEEEecCCCC-
Q 016446 111 VNGKVLTYSAQD----------------------SIYKVFDLKNYT--MLYSISDKHV-QEIKISPGIMLLIFNRSSSH- 164 (389)
Q Consensus 111 pdG~~Las~s~D----------------------~tiklWdl~~g~--~l~tl~~~~V-~~vafS~g~~la~~~~~s~d- 164 (389)
.++++++.|+.+ ..+.++|+.+.+ .+..+....- .+.+.-++.+++.+..+...
T Consensus 251 ~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~ 330 (357)
T 2uvk_A 251 SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGK 330 (357)
T ss_dssp ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGC
T ss_pred ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCC
Confidence 368998888842 256788887766 3444442211 12222367777777644321
Q ss_pred --eeEEEEEcCCCeEEEEE
Q 016446 165 --VPLKILSIEDGTVLKVF 181 (389)
Q Consensus 165 --~tiklWd~~tG~~l~tl 181 (389)
..|.+.++.+++.+..-
T Consensus 331 ~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 331 AVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EEEEEEEEEC-CCSCEEEC
T ss_pred EeeeEEEEEEcCcEeEeee
Confidence 24555577777765443
No 358
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=58.67 E-value=99 Score=27.85 Aligned_cols=85 Identities=12% Similarity=0.151 Sum_probs=54.7
Q ss_pred eEEEEeCCCCeEE--EEec------CCcEEEEEEc-CCceEEEEecCCCCeeEEEEEcCCCeEEEEEeecCCceeEEEEE
Q 016446 124 IYKVFDLKNYTML--YSIS------DKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFI 194 (389)
Q Consensus 124 tiklWdl~~g~~l--~tl~------~~~V~~vafS-~g~~la~~~~~s~d~tiklWd~~tG~~l~tl~~~~~~~~~v~f~ 194 (389)
.+.+|.+..|.=+ +++- +..+|.+.+. |+ ++|++=+..||+||.... ..+ +...
T Consensus 70 ~lt~Wa~~~~nw~wgY~~~ds~~FG~~r~W~i~~~~p~------------G~VqFvN~~TgtCL~ay~---nGv--v~~~ 132 (206)
T 1sr4_A 70 LLTVWALAKRNWLWAYPNIYSQDFGNIRNWKMEPGKHR------------EYFRFVNQSLGTCVEAYG---NGL--IHDI 132 (206)
T ss_dssp EEEECSCSTTCBEEEEEGGGCGGGGGGGCEEEEECSST------------TCEEEEETTTCCEEEEET---TEE--EEEC
T ss_pred EEEEEecCCCcceeeecccccCCcCCcceeEEEeecCC------------CEEEEEECCCCceeeecc---CCe--EEec
Confidence 4469999877754 3332 2467777654 32 578888999999999865 222 3332
Q ss_pred ecCC---C-eEEEEeCCCcEEEEECCCCeEEEEcc
Q 016446 195 EQFN---E-KLLVKQENENLQILDVRNAELMEVSR 225 (389)
Q Consensus 195 ~~~~---~-~l~~~s~D~tIklWd~~tg~~~~~l~ 225 (389)
+..+ + .-+.-...+.++|=++.+|+|+++..
T Consensus 133 C~~s~~~Q~wsiiPttnGAVQIKnvatg~CL~t~~ 167 (206)
T 1sr4_A 133 CSLDKLAQEFELLPTDSGAVVIKSVSQGRCVTYNP 167 (206)
T ss_dssp CCTTCGGGCEEEEEBTTSCEEEEETTTCCEEEECS
T ss_pred CCCCCcccEEEEecCCCccEEEEECCCCccCCccC
Confidence 2211 1 12223467888999999999999743
No 359
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=54.40 E-value=1.2e+02 Score=27.31 Aligned_cols=203 Identities=5% Similarity=-0.042 Sum_probs=98.8
Q ss_pred CCCeEEEEecC----CC-------eEEEEeCCCCeEEE--EecCC-cEEEEEEcCCceEEEEecCC----CCeeEEEEEc
Q 016446 111 VNGKVLTYSAQ----DS-------IYKVFDLKNYTMLY--SISDK-HVQEIKISPGIMLLIFNRSS----SHVPLKILSI 172 (389)
Q Consensus 111 pdG~~Las~s~----D~-------tiklWdl~~g~~l~--tl~~~-~V~~vafS~g~~la~~~~~s----~d~tiklWd~ 172 (389)
.++++++.|+. ++ .+..+|..+.+-.. .+... .-.+++.-++.+.+.+.... .-..+..+|+
T Consensus 55 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~ 134 (318)
T 2woz_A 55 QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDP 134 (318)
T ss_dssp SSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEET
T ss_pred ECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeC
Confidence 56788888873 11 16677877766321 22211 11222333666666665431 1145778898
Q ss_pred CCCeEEEEEeecCCce-eEEEEEecCCCeEEEEeC------CCcEEEEECCCCeEEEEcccCC--CceEEEEEcCCCcEE
Q 016446 173 EDGTVLKVFYHLLHRN-KKVDFIEQFNEKLLVKQE------NENLQILDVRNAELMEVSRTEF--MTPSAFIFLYENQLF 243 (389)
Q Consensus 173 ~tG~~l~tl~~~~~~~-~~v~f~~~~~~~l~~~s~------D~tIklWd~~tg~~~~~l~gh~--~~v~sv~fspdg~~l 243 (389)
.+.+-...-.-...+. ..++. .++..++.|+. -..+.++|+.+.+-.+.-.-.. ..-.+++ -+++++
T Consensus 135 ~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iy 210 (318)
T 2woz_A 135 VAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI--HKGKIV 210 (318)
T ss_dssp TTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEE
T ss_pred CCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE--ECCEEE
Confidence 8765433211111111 12222 33445555653 2468999999887554421111 1112222 367887
Q ss_pred EEEc-C-----CeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCCCCEEEEEecCCCccc---ccCCCCCeEEEEeCC
Q 016446 244 LTFR-N-----RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQ---WMEGSAGSINVSSIL 314 (389)
Q Consensus 244 aS~s-D-----~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~---~~~s~D~tIklWd~~ 314 (389)
+-|+ + ..+.++|+....-..+..-..+ -. ...+..-++++++.|+.+..... .....-..|..+|+.
T Consensus 211 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~--~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~ 286 (318)
T 2woz_A 211 IAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQE--RS--SISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDD 286 (318)
T ss_dssp EEEEEETTEEEEEEEEEETTTCCEEECCCCSSC--CB--SCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETT
T ss_pred EEcCcCCCCccceEEEEECCCCeEEECCCCCCc--cc--ceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCC
Confidence 7775 3 3567888863333333221111 01 11122347888888876421000 000112568889998
Q ss_pred CCeEEEE
Q 016446 315 TGKCLAK 321 (389)
Q Consensus 315 tg~~l~t 321 (389)
+.+-...
T Consensus 287 ~~~W~~~ 293 (318)
T 2woz_A 287 KKEWAGM 293 (318)
T ss_dssp TTEEEEE
T ss_pred CCEehhh
Confidence 8775544
No 360
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=51.41 E-value=2.1e+02 Score=29.07 Aligned_cols=199 Identities=14% Similarity=0.143 Sum_probs=105.4
Q ss_pred cCCCeEEEEecCCCeEEEEeCCCCeEEEEec-CCcEEEEEEcCCceEEEEecCCCCeeEEEEEcCC-CeEEEEEeecCC-
Q 016446 110 DVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIED-GTVLKVFYHLLH- 186 (389)
Q Consensus 110 ~pdG~~Las~s~D~tiklWdl~~g~~l~tl~-~~~V~~vafS~g~~la~~~~~s~d~tiklWd~~t-G~~l~tl~~~~~- 186 (389)
+|..+.||-=+ ..++.++|+++-+.+.+.. .+.|-=-++=+..+|+.-. +..|.-|++.. -+..+.|.-|..
T Consensus 74 nP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lVT----~taVyHWsi~~~s~P~kvFdR~~~L 148 (494)
T 1bpo_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT----DNAVYHWSMEGESQPVKMFDRHSSL 148 (494)
T ss_dssp CSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEEC----SSEEEEEESSSSCCCEEEEECCGGG
T ss_pred CCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEEc----CCeeEEecccCCCCchhheecchhc
Confidence 48888888665 6899999999988887665 3433322333344444332 24799999863 356677764422
Q ss_pred -ceeEEEEEe-cCCCeEEE-E--e----CCCcEEEEECCCCeEEEEcccCCCceEEEEEc--C-CCcEEEEEc-C---Ce
Q 016446 187 -RNKKVDFIE-QFNEKLLV-K--Q----ENENLQILDVRNAELMEVSRTEFMTPSAFIFL--Y-ENQLFLTFR-N---RT 250 (389)
Q Consensus 187 -~~~~v~f~~-~~~~~l~~-~--s----~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fs--p-dg~~laS~s-D---~t 250 (389)
...=+.+.. ++..-++. | . -.|.++||.++ ...-|.++||...--.+.+. | ..++|+-+. . +.
T Consensus 149 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~k 227 (494)
T 1bpo_A 149 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 227 (494)
T ss_dssp TTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST-TCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCE
T ss_pred ccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecc-ccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcE
Confidence 223344432 22333332 2 1 34788999995 45567788997544333222 1 123444333 2 45
Q ss_pred EEEEeCC-C---cE---EEEec--cCcCCcCCCCeeEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEE
Q 016446 251 VAVWNFR-G---EL---VTSFE--DHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAK 321 (389)
Q Consensus 251 IklWd~~-G---~~---l~tl~--gh~~~~~~~~v~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~t 321 (389)
+.|=++. . .. .+..+ -......|. =-++.+|+.-..+---.. -|.|.|.|++||.|+..
T Consensus 228 Lhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DF-Pvamqvs~kygviyviTK-----------~G~i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 228 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDF-PVAMQISEKHDVVFLITK-----------YGYIHLYDLETGTCIYM 295 (494)
T ss_dssp EEEEECSCCCTTCCCCCCEEEECCCCTTSTTCC-EEEEEEETTTTEEEEEET-----------TSEEEEEETTTCCEEEE
T ss_pred EEEEEcCCCccCCCCccceeeeeeCCcccccCc-eeEEEecccCCEEEEEec-----------CceEEEEecccceeeee
Confidence 5555552 1 00 00000 000000000 013334443333333222 38999999999999977
Q ss_pred ecCCC
Q 016446 322 INATN 326 (389)
Q Consensus 322 l~gH~ 326 (389)
-+--+
T Consensus 296 nrIs~ 300 (494)
T 1bpo_A 296 NRISG 300 (494)
T ss_dssp EECCS
T ss_pred ecccC
Confidence 66544
No 361
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=45.66 E-value=2e+02 Score=27.04 Aligned_cols=21 Identities=19% Similarity=0.317 Sum_probs=14.8
Q ss_pred CEEEEEECCC-CCEEEEecCCC
Q 016446 362 DITSLFYDEE-RNEIYTGNRHG 382 (389)
Q Consensus 362 ~V~svafSpd-g~~LaSgs~D~ 382 (389)
.|.+|+++|+ ...|+.+...+
T Consensus 233 ~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 233 DPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp CEEEEEECSSSTTEEEEEETTE
T ss_pred ceeEEEECCCCCCEEEEEcCCe
Confidence 5899999996 35566565544
No 362
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=45.60 E-value=2.2e+02 Score=27.70 Aligned_cols=100 Identities=10% Similarity=0.087 Sum_probs=60.0
Q ss_pred eEEEEEcCCC--eEEEEEeec------CCceeEEEEE-e-cC----CCeEEEE-eCCCcEEEEECCCCeEEEEcccCCCc
Q 016446 166 PLKILSIEDG--TVLKVFYHL------LHRNKKVDFI-E-QF----NEKLLVK-QENENLQILDVRNAELMEVSRTEFMT 230 (389)
Q Consensus 166 tiklWd~~tG--~~l~tl~~~------~~~~~~v~f~-~-~~----~~~l~~~-s~D~tIklWd~~tg~~~~~l~gh~~~ 230 (389)
.|-.||+.|+ ++++++... ......+.+- . +. +...-++ +.+.-|-++|+++|+-.+.+..+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~--- 200 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPT--- 200 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGG---
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCC---
Confidence 4667999999 999988742 1234556654 1 11 2233333 36789999999999998876322
Q ss_pred eEEEEEcCCCcEEEEEcCCeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCC----CCEEEEEe
Q 016446 231 PSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSD----QDLIISYC 292 (389)
Q Consensus 231 v~sv~fspdg~~laS~sD~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpd----G~~laS~s 292 (389)
|.|| ... ...+.|+.+. +..+ |..+++||+ +++|-=..
T Consensus 201 -----~~pd-~~~---------~~~i~G~~~~-~~~G--------i~gIaLsp~~~~~~~~LYf~p 242 (381)
T 3q6k_A 201 -----FKAE-RPT---------KFDYGGKEYE-FKAG--------IFGITLGDRDSEGNRPAYYLA 242 (381)
T ss_dssp -----GSCC-SCE---------EEEETTEEEE-ECCC--------EEEEEECCCCTTSCCEEEEEE
T ss_pred -----Cccc-cCc---------ceEECCEEeE-eccC--------ceEEEecCCcCCCCeEEEEEE
Confidence 4555 111 1123344332 2222 789999998 67665443
No 363
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=42.43 E-value=1.6e+02 Score=34.49 Aligned_cols=120 Identities=15% Similarity=0.197 Sum_probs=78.3
Q ss_pred CeEEEEeCCCcEEEEECCCCeEEEEcccCCCceEEEEEcCCCcEEEEEcCCeEEEEeCCC--cEEEEeccCcCCcCCCCe
Q 016446 199 EKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRG--ELVTSFEDHLLWHPDCNT 276 (389)
Q Consensus 199 ~~l~~~s~D~tIklWd~~tg~~~~~l~gh~~~v~sv~fspdg~~laS~sD~tIklWd~~G--~~l~tl~gh~~~~~~~~v 276 (389)
..||... ..+++|.|+++.+.++...=...-|..==.+|+. |+=..+..|--|+++| +.++-|+-|... .+|.|
T Consensus 78 ~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~--l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L-~~~QI 153 (1630)
T 1xi4_A 78 KVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNT--VALVTDNAVYHWSMEGESQPVKMFDRHSSL-AGCQI 153 (1630)
T ss_pred ceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCCe--eEEEcCCeEEEeccCCCCccHHHHhcchhc-ccCee
Confidence 3333343 8999999999988877644333322222125544 4445588899999975 466667766554 24567
Q ss_pred eEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecCCCC
Q 016446 277 NNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINATNC 327 (389)
Q Consensus 277 ~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~gH~~ 327 (389)
-+-.-+||+++++-.+-... .+.-.|.+-|+.++ .+.-+.+.||..
T Consensus 154 inY~~d~~~kW~~l~gi~~~----~~~v~G~mQLyS~e-r~~sQ~iegha~ 199 (1630)
T 1xi4_A 154 INYRTDAKQKWLLLTGISAQ----QNRVVGAMQLYSVD-RKVSQPIEGHAA 199 (1630)
T ss_pred EEeeeCCCCCeEEEEeeccC----CCcccceeeeeecc-cccchhhhHhHh
Confidence 88888999999986553210 12345889999976 445678888873
No 364
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=38.93 E-value=5.4e+02 Score=30.16 Aligned_cols=119 Identities=13% Similarity=0.140 Sum_probs=66.9
Q ss_pred cCCCeEEEEecCCCeEEEEeCCCCeEEEEec-CCcEEEEEEcCCceEEEEecCCCCeeEEEEEcCC-CeEEEEEeecCC-
Q 016446 110 DVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIED-GTVLKVFYHLLH- 186 (389)
Q Consensus 110 ~pdG~~Las~s~D~tiklWdl~~g~~l~tl~-~~~V~~vafS~g~~la~~~~~s~d~tiklWd~~t-G~~l~tl~~~~~- 186 (389)
+|..++||-=+ ..++.++|+++-+.+.+.. .+.|.=-++=...+|+.-. +..|.-|++.. -+..+.|.-|..
T Consensus 74 nP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lVT----~~aVyHW~~~~~s~P~k~fdR~~~L 148 (1630)
T 1xi4_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT----DNAVYHWSMEGESQPVKMFDRHSSL 148 (1630)
T ss_pred CCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEEc----CCeEEEeccCCCCccHHHHhcchhc
Confidence 47888888654 6899999998877776554 3444333333444444332 24699999863 234444443311
Q ss_pred -ceeEEEEEe-cCCCeEEE-E------eCCCcEEEEECCCCeEEEEcccCCCceEEE
Q 016446 187 -RNKKVDFIE-QFNEKLLV-K------QENENLQILDVRNAELMEVSRTEFMTPSAF 234 (389)
Q Consensus 187 -~~~~v~f~~-~~~~~l~~-~------s~D~tIklWd~~tg~~~~~l~gh~~~v~sv 234 (389)
...=+.+.. ++..-++. | .-.|.++|+.++ ....|.++||...--.+
T Consensus 149 ~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~e-r~~sQ~iegha~~F~~~ 204 (1630)
T 1xi4_A 149 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFAQF 204 (1630)
T ss_pred ccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecc-cccchhhhHhHhhhhee
Confidence 112223321 22333332 2 145899999995 44556778887544333
No 365
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=37.75 E-value=2.6e+02 Score=26.16 Aligned_cols=21 Identities=10% Similarity=0.066 Sum_probs=16.0
Q ss_pred CceEEEEEcC--CCcEEEEEcCC
Q 016446 229 MTPSAFIFLY--ENQLFLTFRNR 249 (389)
Q Consensus 229 ~~v~sv~fsp--dg~~laS~sD~ 249 (389)
..|.+|++.| ++.+.|.+..+
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC-
T ss_pred CceEEEEECCCCCCeEEEEecCC
Confidence 4699999998 78888776554
No 366
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=32.36 E-value=4.4e+02 Score=27.25 Aligned_cols=180 Identities=11% Similarity=0.094 Sum_probs=88.2
Q ss_pred CCeEEEEecCCC------eEEEEeCCCCeE--EEEecC--CcEEEEEEcCCceEEEEecCCCCeeEEEEEcCCCeEEEEE
Q 016446 112 NGKVLTYSAQDS------IYKVFDLKNYTM--LYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVF 181 (389)
Q Consensus 112 dG~~Las~s~D~------tiklWdl~~g~~--l~tl~~--~~V~~vafS~g~~la~~~~~s~d~tiklWd~~tG~~l~tl 181 (389)
+|++++.|+.++ .+-++|+.+.+- +..+.. ..-.++.+.+|.+++.++.+... .+.++|+.+++=...-
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP-AMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC-SEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC-CEEEEECCCCceEEcc
Confidence 899999988543 567788877652 222221 12223333477777776544433 7999999886633221
Q ss_pred e---ecCCce-eE-EEEEecC-CCeEEEEeC--C-----CcEEEEECCCCe------EEEEcc--cCCCceEEEEEcCCC
Q 016446 182 Y---HLLHRN-KK-VDFIEQF-NEKLLVKQE--N-----ENLQILDVRNAE------LMEVSR--TEFMTPSAFIFLYEN 240 (389)
Q Consensus 182 ~---~~~~~~-~~-v~f~~~~-~~~l~~~s~--D-----~tIklWd~~tg~------~~~~l~--gh~~~v~sv~fspdg 240 (389)
. ....+. .. +.+. .. +..++.|+. + ..+.+||+.+.+ -.+... ...-.-.+++...++
T Consensus 530 ~~g~~p~~r~~~~a~v~~-~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~ 608 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFD-PVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPR 608 (695)
T ss_dssp CSSGGGGSCCBSCEEEEE-TTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETT
T ss_pred CCCCCCCcccceeEEEEe-CCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCC
Confidence 1 000111 12 3333 22 335555664 3 468899998877 222211 010011123334447
Q ss_pred cEEEEEc-C--------CeEEEEeCCCcEEEEeccCcC----CcCCCCeeEEEECCCCCEEEEEec
Q 016446 241 QLFLTFR-N--------RTVAVWNFRGELVTSFEDHLL----WHPDCNTNNIYITSDQDLIISYCK 293 (389)
Q Consensus 241 ~~laS~s-D--------~tIklWd~~G~~l~tl~gh~~----~~~~~~v~sv~fSpdG~~laS~s~ 293 (389)
++++-|+ + ..|.++|........+.-... +.+...=.+.+..++|++++.|+.
T Consensus 609 ~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg 674 (695)
T 2zwa_A 609 KLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGG 674 (695)
T ss_dssp EEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCE
T ss_pred EEEEECCccCCCCCCCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCC
Confidence 8888775 3 358889986332222221000 000000023444567788888863
No 367
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=31.94 E-value=1.2e+02 Score=27.22 Aligned_cols=93 Identities=8% Similarity=0.007 Sum_probs=52.7
Q ss_pred eeeeEeEeccCCCCCcceeEeeecccCceeEEEecCCCeEEEE-ecCCCeEEEEeCCCCeEEEEecCCcEEEEEEc-C-C
Q 016446 76 RSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTY-SAQDSIYKVFDLKNYTMLYSISDKHVQEIKIS-P-G 152 (389)
Q Consensus 76 ~~~~l~~i~~g~~~~~~~l~~~~~~~~~~~v~Fs~pdG~~Las-~s~D~tiklWdl~~g~~l~tl~~~~V~~vafS-~-g 152 (389)
-.+.+|.+..|.. +|+=... .+..|- ..-..-.. .-.+|+|++=+..+|.|+.....+ | +..+ + +
T Consensus 69 ~~lt~Wa~~~~nw-----~wgY~~~---ds~~FG-~~r~W~i~~~~p~G~VqFvN~~TgtCL~ay~nG-v--v~~~C~~s 136 (206)
T 1sr4_A 69 ALLTVWALAKRNW-----LWAYPNI---YSQDFG-NIRNWKMEPGKHREYFRFVNQSLGTCVEAYGNG-L--IHDICSLD 136 (206)
T ss_dssp EEEEECSCSTTCB-----EEEEEGG---GCGGGG-GGGCEEEEECSSTTCEEEEETTTCCEEEEETTE-E--EEECCCTT
T ss_pred CEEEEEecCCCcc-----eeeeccc---ccCCcC-CcceeEEEeecCCCEEEEEECCCCceeeeccCC-e--EEecCCCC
Confidence 4556777777766 5541111 123342 11122222 356789999999999999886532 3 3333 3 2
Q ss_pred ---ceEEEEecCCCCeeEEEEEcCCCeEEEEEe
Q 016446 153 ---IMLLIFNRSSSHVPLKILSIEDGTVLKVFY 182 (389)
Q Consensus 153 ---~~la~~~~~s~d~tiklWd~~tG~~l~tl~ 182 (389)
+..-....+ .+.++|=++.+|+||.+..
T Consensus 137 ~~~Q~wsiiPtt--nGAVQIKnvatg~CL~t~~ 167 (206)
T 1sr4_A 137 KLAQEFELLPTD--SGAVVIKSVSQGRCVTYNP 167 (206)
T ss_dssp CGGGCEEEEEBT--TSCEEEEETTTCCEEEECS
T ss_pred CcccEEEEecCC--CccEEEEECCCCccCCccC
Confidence 222111111 2467777999999999864
No 368
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=29.78 E-value=4e+02 Score=25.96 Aligned_cols=197 Identities=13% Similarity=0.163 Sum_probs=108.5
Q ss_pred EEEecCCCeEEEEecCCCeEEEEeCCCCeEEEEec-CCcEEEEEEcCCceEEEEecCCCCeeEEEEEcCC-CeEEEEEee
Q 016446 106 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIED-GTVLKVFYH 183 (389)
Q Consensus 106 v~Fs~pdG~~Las~s~D~tiklWdl~~g~~l~tl~-~~~V~~vafS~g~~la~~~~~s~d~tiklWd~~t-G~~l~tl~~ 183 (389)
.-. +|..+.||-=+ ..++.++|+++-+.+.+.. .+.|.=-++=...+|+.-.. ..|.-|+++. -+..+.|.-
T Consensus 72 AIM-nP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT~----taVyHWs~~~~s~P~kvFdR 145 (365)
T 2xzh_A 72 AIM-NPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTD----NAVYHWSMEGESQPVKMFDR 145 (365)
T ss_dssp EEE-CSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEEES----SEEEEEESSTTCCCEEEEEC
T ss_pred eee-CCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEEcC----CcEEEEcccCCCCCceeeec
Confidence 334 48889888665 6899999999998887765 45555445554555544322 4699999863 366777764
Q ss_pred cCC--ceeEEEEEe-cCCCeEEE-E--e----CCCcEEEEECCCCeEEEEcccCCCceEEEEE--cC-CCcEEEEEc-C-
Q 016446 184 LLH--RNKKVDFIE-QFNEKLLV-K--Q----ENENLQILDVRNAELMEVSRTEFMTPSAFIF--LY-ENQLFLTFR-N- 248 (389)
Q Consensus 184 ~~~--~~~~v~f~~-~~~~~l~~-~--s----~D~tIklWd~~tg~~~~~l~gh~~~v~sv~f--sp-dg~~laS~s-D- 248 (389)
|.. ...=+.+.. ++..-++. | . -.|.++|+.++ ...-|.++||...--.+.+ .| ..++|+-+. .
T Consensus 146 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 224 (365)
T 2xzh_A 146 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 224 (365)
T ss_dssp CGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT-TTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEET
T ss_pred chhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeec-ccccceeeeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 422 223344432 22233332 2 1 33788999995 4556778899643322222 11 233444442 1
Q ss_pred --CeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECCC--------------CCEEEEEecCCCcccccCCCCCeEEEEe
Q 016446 249 --RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSD--------------QDLIISYCKAEPEDQWMEGSAGSINVSS 312 (389)
Q Consensus 249 --~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSpd--------------G~~laS~s~D~~~~~~~~s~D~tIklWd 312 (389)
+.+.|=++...- +|.... ....-.+.|-|| -..+---.. -|.|.|.|
T Consensus 225 ~g~kLhIiEi~~~~----~~~~~f--~kk~vdi~fppea~~DFPVamqvs~kygviyviTK-----------~G~ihlyD 287 (365)
T 2xzh_A 225 AGGKLHIIEVGTPP----TGNQPF--PKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK-----------YGYIHLYD 287 (365)
T ss_dssp TEEEEEEEECSSCC----TTCCCC--CCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEET-----------TSEEEEEE
T ss_pred CCcEEEEEEcCCCC----CCCCCc--ccccceeeCCccccCCceEEEEecccCCEEEEEeC-----------CcEEEEEE
Confidence 355555541000 000000 001234445553 222222222 38999999
Q ss_pred CCCCeEEEEecCCC
Q 016446 313 ILTGKCLAKINATN 326 (389)
Q Consensus 313 ~~tg~~l~tl~gH~ 326 (389)
++||.|+..-+=-+
T Consensus 288 leTgt~i~~nrIS~ 301 (365)
T 2xzh_A 288 LETGTCIYMNRISG 301 (365)
T ss_dssp TTTCCEEEEEECCS
T ss_pred cccCcEEEEeccCC
Confidence 99999998766544
No 369
>3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene}
Probab=27.27 E-value=2.6e+02 Score=22.89 Aligned_cols=106 Identities=11% Similarity=0.046 Sum_probs=56.7
Q ss_pred CCCcEEEEECCCCeEEEEcccCC-CceEEEEEc----CCCcEEEEE-cCCeEEEEeCC-CcEEEEeccCcCCcCCCCe--
Q 016446 206 ENENLQILDVRNAELMEVSRTEF-MTPSAFIFL----YENQLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNT-- 276 (389)
Q Consensus 206 ~D~tIklWd~~tg~~~~~l~gh~-~~v~sv~fs----pdg~~laS~-sD~tIklWd~~-G~~l~tl~gh~~~~~~~~v-- 276 (389)
.+++.+|-+..+|+|+....+.. ....-+.+. +..+..+.. ++|..+|-+.. |.||-.-.+.... ...|
T Consensus 25 ~~g~y~i~n~~sg~cLdv~~~~~~~g~~v~~~~c~~~~~Q~W~~~~~~~g~y~i~~~~sg~cLdv~~~~~~~--G~~v~~ 102 (165)
T 3pg0_A 25 GDGYYKLVARHSGKALDVENASTSDGANVIQYSYSGGDNQQWRLVDLGDGYYKLVARHSGKALDVENASTSD--GANVIQ 102 (165)
T ss_dssp -CCEEEEEETTTCCEEEEGGGCCSTTCBEEEECCCCCGGGCEEEEEEETTEEEEEETTTCCEEEEGGGCCST--TCBEEE
T ss_pred CCCEEEEEECCCCCEEEeCCCCCCCCCEEEEECCCCCccceEEEEECCCCEEEEEECCCCCEEEeCCCCCCC--CCEEEE
Confidence 67888899988999988754321 111112232 222333333 38888888886 8888654321110 0001
Q ss_pred eEEEECCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecC
Q 016446 277 NNIYITSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 324 (389)
Q Consensus 277 ~sv~fSpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~g 324 (389)
+...=+++.++.+... .+|+.+|-+..+|+||..-.+
T Consensus 103 ~~c~~~~~Q~W~~~~~-----------g~g~~~i~~~~sg~cLdv~~~ 139 (165)
T 3pg0_A 103 YSYSGGDNQQWRLVDL-----------GDGYYKLVARHSGKALDVENA 139 (165)
T ss_dssp ECCCCCGGGCEEEEEC-----------SSSCEEEEETTTCCEEEEGGG
T ss_pred EcCCCCCccEEEEEEC-----------CCCEEEEEECCCCcEEEcCCC
Confidence 0000012344544432 247888888889999966543
No 370
>3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A*
Probab=23.52 E-value=5.5e+02 Score=25.60 Aligned_cols=103 Identities=11% Similarity=0.103 Sum_probs=60.6
Q ss_pred CCCcEEEEECCCCeEEEEcccCC-CceEEEEEc----CCCcEEEEEc-CCeEEEEeCC-CcEEEEeccCcCCcCCCCeeE
Q 016446 206 ENENLQILDVRNAELMEVSRTEF-MTPSAFIFL----YENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNN 278 (389)
Q Consensus 206 ~D~tIklWd~~tg~~~~~l~gh~-~~v~sv~fs----pdg~~laS~s-D~tIklWd~~-G~~l~tl~gh~~~~~~~~v~s 278 (389)
.+++.+|-+..+|+|+.+..+-. ....-+.+. ++.+..+... ++..+|-+.. |+||-.-.+.... . ..
T Consensus 359 ~~~~y~i~n~~sg~cLdv~~~~~~~G~~v~~~~c~g~~~Q~W~~~~~g~g~y~i~n~~sg~cLdv~~~~~~~---G--~~ 433 (526)
T 3vsf_A 359 DTTRYKLVNKNSGKVLDVLDGSVDNAAQIVQWTDNGSLSQQWYLVDVGGGYKKIVNVKSGRALDVKDESKED---G--GV 433 (526)
T ss_dssp CCCCEEEEETTTCCEEEEGGGCCSTTEEEEEECCCCCGGGCEEEEECSTTEEEEEESSSCCEEEEGGGCCST---T--EE
T ss_pred CCccEEEEECCCCceEEecCCCCCCCcEEEEccCCCCcceEEEEEECCCCEEEEEECCCCCEEEeCCCCCCC---C--CE
Confidence 57888999999999999865422 122222332 2223444443 8888888875 8888654332110 0 11
Q ss_pred EE-E----CCCCCEEEEEecCCCcccccCCCCCeEEEEeCCCCeEEEEecC
Q 016446 279 IY-I----TSDQDLIISYCKAEPEDQWMEGSAGSINVSSILTGKCLAKINA 324 (389)
Q Consensus 279 v~-f----SpdG~~laS~s~D~~~~~~~~s~D~tIklWd~~tg~~l~tl~g 324 (389)
|. . ++++++.+.... +|..+|-+..+|+||..-.+
T Consensus 434 v~~~~c~g~~nQ~W~~~~~g-----------~g~y~i~~~~sg~cLdv~~~ 473 (526)
T 3vsf_A 434 LIQYTSNGGYNQHWKFTDIG-----------DGYYKISSRHCGKLIDVRKW 473 (526)
T ss_dssp EEEECCCCCGGGCEEEEEEE-----------TTEEEEEESSSCCEEEEGGG
T ss_pred EEEecCCCCcccEEEEEECC-----------CCeEEEEECCCCCEEEeCCC
Confidence 11 1 234555554332 48889999999999966443
No 371
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=21.72 E-value=2.9e+02 Score=21.54 Aligned_cols=73 Identities=10% Similarity=-0.044 Sum_probs=40.5
Q ss_pred eCCCcEEEEECCCCeEEEEcccCC-CceEEEEEcCCCcEEEEEcCCeEEEEeCCCcEEEEeccCcCCcCCCCeeEEEECC
Q 016446 205 QENENLQILDVRNAELMEVSRTEF-MTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITS 283 (389)
Q Consensus 205 s~D~tIklWd~~tg~~~~~l~gh~-~~v~sv~fspdg~~laS~sD~tIklWd~~G~~l~tl~gh~~~~~~~~v~sv~fSp 283 (389)
+.||.+.|++...+..+-.-.... .....+.|..+|.+++...++.+ +|...... ... ...+.+-+
T Consensus 31 q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~~~~-iW~S~t~~------~~~------~~~~~L~~ 97 (113)
T 3mez_B 31 RDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNT-VFVSNTVG------QEG------DYVLILQI 97 (113)
T ss_dssp CTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTTSCE-EEECSCCC------SSS------CCEEEECT
T ss_pred cCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCCCCE-EEECCCcC------CCC------CEEEEEcC
Confidence 456666666653344433322221 12345778999999887666665 78864211 111 13456677
Q ss_pred CCCEEEE
Q 016446 284 DQDLIIS 290 (389)
Q Consensus 284 dG~~laS 290 (389)
||.+.+-
T Consensus 98 dGnlvly 104 (113)
T 3mez_B 98 NGQAVVY 104 (113)
T ss_dssp TSCEEEE
T ss_pred CceEEEe
Confidence 8887664
Done!