Query 016449
Match_columns 389
No_of_seqs 285 out of 1937
Neff 5.3
Searched_HMMs 13730
Date Mon Mar 25 13:46:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016449.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016449hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xbla_ a.2.3.1 (A:) DnaJ chap 99.9 1.7E-23 1.2E-27 163.8 5.9 72 18-89 2-73 (75)
2 d1hdja_ a.2.3.1 (A:) HSP40 {Hu 99.8 4.3E-22 3.1E-26 156.2 4.8 75 18-93 2-76 (77)
3 d1wjza_ a.2.3.1 (A:) CSL-type 99.8 1.8E-20 1.3E-24 152.5 4.0 72 14-85 11-88 (94)
4 d1gh6a_ a.2.3.1 (A:) Large T a 99.8 3.8E-20 2.8E-24 154.9 1.2 67 18-88 7-75 (114)
5 d1fafa_ a.2.3.1 (A:) Large T a 99.6 2.5E-17 1.8E-21 129.9 1.0 66 17-86 9-76 (79)
6 d1fpoa1 a.2.3.1 (A:1-76) HSC20 99.6 4E-17 2.9E-21 127.0 1.6 64 20-83 2-72 (76)
7 d1iura_ a.2.3.1 (A:) Hypotheti 99.6 1.4E-16 1E-20 127.9 1.9 68 16-86 13-81 (88)
8 d1nz6a_ a.2.3.1 (A:) Auxilin J 99.6 2.9E-16 2.1E-20 128.3 3.0 64 18-81 32-98 (98)
9 d2e50a1 d.305.1.1 (A:1-222) Pr 30.8 80 0.0058 26.6 8.3 48 283-330 28-76 (222)
10 d1k4ta1 a.2.8.1 (A:641-712) Eu 27.8 98 0.0071 22.0 8.2 47 276-322 4-58 (72)
No 1
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Probab=99.87 E-value=1.7e-23 Score=163.76 Aligned_cols=72 Identities=44% Similarity=0.835 Sum_probs=68.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCchhhhhHhhHhhhhhccCCccccccccccCcccc
Q 016449 18 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 89 (389)
Q Consensus 18 ~~d~YeiLGV~~~As~~EIKkAYrklalk~HPDKn~~~~~a~~~F~~I~~AYevLsDp~kR~~YD~~G~~~l 89 (389)
++|||+||||+++||.+|||+|||+++++||||++++++.+..+|+.|++||+||+||.+|..||.+|..++
T Consensus 2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~ 73 (75)
T d1xbla_ 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF 73 (75)
T ss_dssp CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSC
T ss_pred CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCcccc
Confidence 689999999999999999999999999999999999888899999999999999999999999999997654
No 2
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=4.3e-22 Score=156.18 Aligned_cols=75 Identities=47% Similarity=0.841 Sum_probs=69.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCchhhhhHhhHhhhhhccCCccccccccccCccccccch
Q 016449 18 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVESES 93 (389)
Q Consensus 18 ~~d~YeiLGV~~~As~~EIKkAYrklalk~HPDKn~~~~~a~~~F~~I~~AYevLsDp~kR~~YD~~G~~~l~~~~ 93 (389)
.+|||+||||+++||.++|++||+++++++|||+++ ++++.++|+.|++||+||+||.+|..||.+|.+++.+.|
T Consensus 2 ~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~-~~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~~~~g~g 76 (77)
T d1hdja_ 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGSG 76 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCSSC
T ss_pred CCChHHHcCCCCCcCHHHHHHHHHHHHHHhcccccc-chhHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcCCC
Confidence 579999999999999999999999999999999997 577889999999999999999999999999998876543
No 3
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.79 E-value=1.8e-20 Score=152.46 Aligned_cols=72 Identities=29% Similarity=0.610 Sum_probs=65.2
Q ss_pred ccCCCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCC------chhhhhHhhHhhhhhccCCccccccccccC
Q 016449 14 GKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNAND------PVAADIFKEVTFSYNILSDPDKRRQYDTAG 85 (389)
Q Consensus 14 ~~~~~~d~YeiLGV~~~As~~EIKkAYrklalk~HPDKn~~~------~~a~~~F~~I~~AYevLsDp~kR~~YD~~G 85 (389)
....++|||+||||+++|+.++||+||++|+++||||+++.+ +.+.++|+.|++||+||+||.+|+.||..+
T Consensus 11 ~~~~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~ 88 (94)
T d1wjza_ 11 EQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR 88 (94)
T ss_dssp SSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred hhhhccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHcc
Confidence 445678999999999999999999999999999999998764 347788999999999999999999999754
No 4
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}
Probab=99.76 E-value=3.8e-20 Score=154.94 Aligned_cols=67 Identities=22% Similarity=0.313 Sum_probs=61.0
Q ss_pred CCCcccccCCCCCC--CHHHHHHHHHHHHHhhCCCCCCCCchhhhhHhhHhhhhhccCCccccccccccCccc
Q 016449 18 RRDPYEVLGVSRNC--TDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 88 (389)
Q Consensus 18 ~~d~YeiLGV~~~A--s~~EIKkAYrklalk~HPDKn~~~~~a~~~F~~I~~AYevLsDp~kR~~YD~~G~~~ 88 (389)
..|||+||||+++| +.++||+|||+||++|||||+++ .++|+.|++||+||+||.+|..||..|...
T Consensus 7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~----~e~F~~I~~AY~vLsd~~kR~~YD~~~~~~ 75 (114)
T d1gh6a_ 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGGFW 75 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSCCC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhh----HHHHHHHHHHHHHhCCHHHHHHHhccCCCC
Confidence 46899999999999 78899999999999999999974 368999999999999999999999987644
No 5
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}
Probab=99.62 E-value=2.5e-17 Score=129.95 Aligned_cols=66 Identities=18% Similarity=0.309 Sum_probs=59.8
Q ss_pred CCCCcccccCCCCCC--CHHHHHHHHHHHHHhhCCCCCCCCchhhhhHhhHhhhhhccCCccccccccccCc
Q 016449 17 LRRDPYEVLGVSRNC--TDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGF 86 (389)
Q Consensus 17 ~~~d~YeiLGV~~~A--s~~EIKkAYrklalk~HPDKn~~~~~a~~~F~~I~~AYevLsDp~kR~~YD~~G~ 86 (389)
...+||+||||++++ +.++||+|||+++++||||+++ + .++|++|++||++|+|+.+|..||..|.
T Consensus 9 ~~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g-~---~e~~~~in~Ay~~L~d~~~r~~~~~~~~ 76 (79)
T d1fafa_ 9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG-S---HALMQELNSLWGTFKTEVYNLRMNLGGT 76 (79)
T ss_dssp HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC-C---HHHHHHHHHHHHHHHHHHHHHTTCCSSC
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCC-C---HHHHHHHHHHHHHHCCHHHHHHHccCCC
Confidence 346899999999988 8999999999999999999985 3 4689999999999999999999998663
No 6
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Probab=99.61 E-value=4e-17 Score=127.02 Aligned_cols=64 Identities=22% Similarity=0.416 Sum_probs=57.4
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHhhCCCCCCCCc-----hhhhhHhhHhhhhhccCCccccccccc
Q 016449 20 DPYEVLGVSRNC--TDQEIKSAYRKMALKYHPDKNANDP-----VAADIFKEVTFSYNILSDPDKRRQYDT 83 (389)
Q Consensus 20 d~YeiLGV~~~A--s~~EIKkAYrklalk~HPDKn~~~~-----~a~~~F~~I~~AYevLsDp~kR~~YD~ 83 (389)
|||+||||++++ +.++||+|||++++++|||++.+.+ .+...|+.|++||+||+||.+|..|+.
T Consensus 2 nyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll 72 (76)
T d1fpoa1 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLL 72 (76)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred ChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 899999999864 5899999999999999999987654 256789999999999999999999985
No 7
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.4e-16 Score=127.91 Aligned_cols=68 Identities=25% Similarity=0.403 Sum_probs=59.6
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCc-hhhhhHhhHhhhhhccCCccccccccccCc
Q 016449 16 QLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDP-VAADIFKEVTFSYNILSDPDKRRQYDTAGF 86 (389)
Q Consensus 16 ~~~~d~YeiLGV~~~As~~EIKkAYrklalk~HPDKn~~~~-~a~~~F~~I~~AYevLsDp~kR~~YD~~G~ 86 (389)
..-+++|+||||+.+||.+|||+|||+|+++||||+|+++. .|.++|+.|+.||++|++ +..||..+.
T Consensus 13 ~~~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~~---~~~~d~~~~ 81 (88)
T d1iura_ 13 SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEK---QAFLDQNAD 81 (88)
T ss_dssp SCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHH---HTTCSSSSS
T ss_pred hHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHH---HHHhhccch
Confidence 34479999999999999999999999999999999999875 488999999999999974 566776554
No 8
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.57 E-value=2.9e-16 Score=128.26 Aligned_cols=64 Identities=27% Similarity=0.495 Sum_probs=58.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCc---hhhhhHhhHhhhhhccCCccccccc
Q 016449 18 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDP---VAADIFKEVTFSYNILSDPDKRRQY 81 (389)
Q Consensus 18 ~~d~YeiLGV~~~As~~EIKkAYrklalk~HPDKn~~~~---~a~~~F~~I~~AYevLsDp~kR~~Y 81 (389)
..++|++|||...+|.++||+|||++++.+|||++++++ .|.+.|+.|++||++|+||.+|..|
T Consensus 32 ~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y 98 (98)
T d1nz6a_ 32 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 98 (98)
T ss_dssp TCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred cccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence 457899999999999999999999999999999988654 2678899999999999999999998
No 9
>d2e50a1 d.305.1.1 (A:1-222) Protein SET {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.77 E-value=80 Score=26.61 Aligned_cols=48 Identities=15% Similarity=0.225 Sum_probs=28.5
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Q 016449 283 ILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAI-DELLKQRNEIHA 330 (389)
Q Consensus 283 ~~~k~~el~~f~~ey~~~~~~~~~~~~~~~~~~~~~-~~ll~~r~~~~~ 330 (389)
....=.+|..+|.|+.++-+++.+-.-++.++-... .-|+.+|.+|-.
T Consensus 28 ~~~~i~~L~~iQ~e~~~l~~e~~~e~~~le~k~~~~~~ply~~R~~iI~ 76 (222)
T d2e50a1 28 QQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIA 76 (222)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhc
Confidence 334445667777777766666665555555444333 447778877753
No 10
>d1k4ta1 a.2.8.1 (A:641-712) Eukaryotic DNA topoisomerase I, dispensable insert domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.83 E-value=98 Score=22.04 Aligned_cols=47 Identities=15% Similarity=0.285 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHH
Q 016449 276 LRAVEAEILSKRAELSKFESEYREVLAQFT--------EMTSRYAQEMQAIDELL 322 (389)
Q Consensus 276 ~~~~e~~~~~k~~el~~f~~ey~~~~~~~~--------~~~~~~~~~~~~~~~ll 322 (389)
...+-..|..|+.+|..-+.|+.+|++-+. .++++-+...+.+.+-|
T Consensus 4 MenLq~KI~~Kk~qi~~a~~e~K~ak~d~k~~~~~k~k~~~ekKkK~leRL~EQL 58 (72)
T d1k4ta1 4 MMNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQL 58 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 345556788888888888888888887766 44445555545554444
Done!