BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>016454
MALSASPFPKSLLLSHQKCCFLFPQTLVQGKLKPLRTKYLARALKEWQEYEDAVKRKDLA
RALRFLKNKNDNNPIEPLSDSLMGESNRARLPEFVGGFDRDWEVLDTCLNADDLKLVASA
YKFLQNRGFLPSFGKFNRIVLEGPRDVTPTVLKSSTGLEASKLSPKKWGVSGSSRVALVA
FLGGTSFLLSQGIDIRPNLAVILGLALVDAIFLGGVCLAQISSYWPPYKRRILVHEAGHL
LIAYLMGCPIRGVILDPIVAMQMGIQGQAGTQFWDEKMNNELAEGRLSGTAFDRYSMVLF
AGIAAEALIYGEAEGGENDENLFRSICVLLQPPLSMAQMSNQARWAVLQSYNLLKWHKHA
HLEAVKALESGSSLSVVIRRIEEAMSSST

High Scoring Gene Products

Symbol, full name Information P value
AT1G56180 protein from Arabidopsis thaliana 5.8e-137
AT5G27290 protein from Arabidopsis thaliana 1.0e-22
AT2G21960 protein from Arabidopsis thaliana 7.9e-19
AT1G54680 protein from Arabidopsis thaliana 2.1e-07

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  016454
        (389 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2011861 - symbol:AT1G56180 "AT1G56180" species...  1341  5.8e-137  1
TAIR|locus:2181221 - symbol:AT5G27290 species:3702 "Arabi...   263  1.0e-22   1
TAIR|locus:2052474 - symbol:AT2G21960 species:3702 "Arabi...   238  7.9e-19   1
TAIR|locus:2199471 - symbol:AT1G54680 "AT1G54680" species...   140  2.1e-07   1


>TAIR|locus:2011861 [details] [associations]
            symbol:AT1G56180 "AT1G56180" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] EMBL:CP002684 EMBL:AC069159
            EMBL:BT001014 IPI:IPI00523261 PIR:C96603 RefSeq:NP_564711.1
            UniGene:At.28711 ProteinModelPortal:Q9C7J3 STRING:Q9C7J3
            PRIDE:Q9C7J3 EnsemblPlants:AT1G56180.1 GeneID:842071
            KEGG:ath:AT1G56180 TAIR:At1g56180 InParanoid:Q9C7J3 OMA:NDENLFR
            PhylomeDB:Q9C7J3 ProtClustDB:CLSN2688864 Genevestigator:Q9C7J3
            Uniprot:Q9C7J3
        Length = 389

 Score = 1341 (477.1 bits), Expect = 5.8e-137, P = 5.8e-137
 Identities = 271/396 (68%), Positives = 323/396 (81%)

Query:     1 MALSASPFP--KSLLLSHQKCC-FLFP--QTLVQGKLKPLRTKYLARALKEWQEYEDAVK 55
             MALS S  P  +SL  S  +   FL P  Q+LV G ++    +  + AL+EW+EYEDAVK
Sbjct:     1 MALSPSSPPCLRSLSPSFSRQIGFLVPRVQSLVFGSVRKHELRRPS-ALREWREYEDAVK 59

Query:    56 RKDLARALRFLKN-KNDN--NPIEPLSDSLMGESNRARLPEFVGGFDRDWEVLDTCLNAD 112
             RKDLA ALRFLK+ +ND   + +E +  + +       L       +RDW+VLD CLNAD
Sbjct:    60 RKDLAGALRFLKSIENDEQRDSVESIVTAKLSGLGALEL-------ERDWQVLDACLNAD 112

Query:   113 DLKLVASAYKFLQNRGFLPSFGKFNRIVLEGPRDVTPTVLKSSTGLEASKLSPKKWGVSG 172
             D++LV SA++FL+ RG L +FGKF  IVLEG R+VTPTVLKS+TGLE +KLSPKKWG+SG
Sbjct:   113 DMRLVGSAFRFLKERGLLANFGKFTSIVLEGTREVTPTVLKSATGLEVTKLSPKKWGLSG 172

Query:   173 SSRVALVAFLGGTSFLLSQGIDIRPNLAVILGLALVDAIFLGGVCLAQISSYWPPYKRRI 232
              S +AL A LGG S+LLSQ ID+RPNLAVILGLA +D++FLGG CLAQ+S YWPP+KRRI
Sbjct:   173 GSSIALAALLGGVSYLLSQEIDVRPNLAVILGLAYLDSVFLGGTCLAQVSCYWPPHKRRI 232

Query:   233 LVHEAGHLLIAYLMGCPIRGVILDPIVAMQMGIQGQAGTQFWDEKMNNELAEGRLSGTAF 292
             +VHEAGHLL+AYLMGCPIRGVILDP+VAMQMG+QGQAGTQFWD+KM +E+AEGRLSG++F
Sbjct:   233 VVHEAGHLLVAYLMGCPIRGVILDPVVAMQMGVQGQAGTQFWDQKMESEIAEGRLSGSSF 292

Query:   293 DRYSMVLFAGIAAEALIYGEAEGGENDENLFRSICVLLQPPLSMAQMSNQARWAVLQSYN 352
             DRYSMVLFAGIAAEAL+YGEAEGGENDENLFRSI VLL+PPLS+AQMSNQARW+VLQSYN
Sbjct:   293 DRYSMVLFAGIAAEALVYGEAEGGENDENLFRSISVLLEPPLSVAQMSNQARWSVLQSYN 352

Query:   353 LLKWHKHAHLEAVKALESGSSLSVVIRRIEEAMSSS 388
             LLKWHK AH  AV+AL+ GS LS+VIRRIEEAMSSS
Sbjct:   353 LLKWHKAAHRAAVEALQVGSPLSIVIRRIEEAMSSS 388


>TAIR|locus:2181221 [details] [associations]
            symbol:AT5G27290 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0030003 "cellular
            cation homeostasis" evidence=RCA] [GO:0070838 "divalent metal ion
            transport" evidence=RCA] EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0009507 UniGene:At.49069 UniGene:At.69944 EMBL:BT028971
            IPI:IPI00533047 RefSeq:NP_568492.1 ProteinModelPortal:Q08AA8
            STRING:Q08AA8 PaxDb:Q08AA8 PRIDE:Q08AA8 EnsemblPlants:AT5G27290.1
            GeneID:832787 KEGG:ath:AT5G27290 TAIR:At5g27290 eggNOG:NOG08023
            HOGENOM:HOG000265031 InParanoid:Q08AA8 OMA:KADSQVR PhylomeDB:Q08AA8
            ProtClustDB:CLSN2689874 Genevestigator:Q08AA8 Uniprot:Q08AA8
        Length = 341

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 87/299 (29%), Positives = 143/299 (47%)

Query:   103 EVLDTCLNADDLKLVASAYKFLQNR-GFLPSFGKFNRIVLEGPRDVTPTVLKSSTGLEAS 161
             E +D+ L++ D +   S  K LQ +   L  FG   ++     R  T   LK +    AS
Sbjct:    47 EQVDSKLSSGDERAALSLVKDLQGKPDGLRCFGAARQVP---QRLYTLEELKLNGINAAS 103

Query:   162 KLSPKKWGVSGSSRVALVAFLGGTSFLLSQGIDIRPNLAVILGLALV-----DAI-FLGG 215
              LSP    +    R   +A + G   +  +  D+       L L  +     D + F GG
Sbjct:   104 LLSPTDTTLGSIERNLQIAAVSG-GIVAWKAFDLSSQQLFFLTLGFMFLWTLDLVSFNGG 162

Query:   216 VCLAQISS----YWPPYKRRILVHEAGHLLIAYLMGCPIRGVILDPIVAMQM--GIQGQA 269
             +    + +    +   Y  R++ HEAGH L+AYL+G   RG  L  + A+Q    +  QA
Sbjct:   163 IGSLVLDTTGHTFSQRYHNRVVQHEAGHFLVAYLVGILPRGYTLSSLEALQKEGSLNIQA 222

Query:   270 GTQFWDEKMNNELAEGRLSGTAFDRYSMVLFAGIAAEALIYGEAEGGENDENLFRSICVL 329
             G+ F D +   E+  G++S T  +R+S +  AG+A E L+YG AEGG +D +    +   
Sbjct:   223 GSAFVDYEFLEEVNSGKVSATMLNRFSCIALAGVATEYLLYGYAEGGLDDISKLDGLVKS 282

Query:   330 LQPPLSMAQMSNQARWAVLQSYNLLKWHKHAHLEAVKALESGSSLSVVIRRIEEAMSSS 388
             L    +  +  +Q RW+VL +  LL+ H+ A  +  +A+  G S+   I+ IE+++  S
Sbjct:   283 LG--FTQKKADSQVRWSVLNTILLLRRHEIARSKLAQAMSKGESVGSCIQIIEDSIDPS 339


>TAIR|locus:2052474 [details] [associations]
            symbol:AT2G21960 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009534
            "chloroplast thylakoid" evidence=IDA] [GO:0006098
            "pentose-phosphate shunt" evidence=RCA] EMBL:CP002685 GO:GO:0009534
            EMBL:AC007019 UniGene:At.24155 UniGene:At.48502 EMBL:AY034988
            EMBL:AY142565 IPI:IPI00519882 PIR:C84607 RefSeq:NP_565523.1
            ProteinModelPortal:Q9SJ03 STRING:Q9SJ03 PRIDE:Q9SJ03
            EnsemblPlants:AT2G21960.1 GeneID:816732 KEGG:ath:AT2G21960
            TAIR:At2g21960 InParanoid:Q9SJ03 OMA:NDAAFLF PhylomeDB:Q9SJ03
            ProtClustDB:CLSN2688329 ArrayExpress:Q9SJ03 Genevestigator:Q9SJ03
            Uniprot:Q9SJ03
        Length = 332

 Score = 238 (88.8 bits), Expect = 7.9e-19, P = 7.9e-19
 Identities = 89/320 (27%), Positives = 141/320 (44%)

Query:    73 NPIEPLSDSLMGESNRARLPEFVGGFDRDWEVLDTCLNADDLKLVASAYKFLQNRGFLPS 132
             +P  PL  + +  S+ +  P    GFD     L++ +N  D   V  A   L   G+   
Sbjct:    26 HPRNPLIQAAVSPSSSSSSPTASSGFDLS--SLESAINKKDSNGVKEALDKLSEEGWAKK 83

Query:   133 FGKFNRIVLEGP--RDVTPTVLKSSTGLEASKLSPKK---WGVSGSSR-VALVA--FLGG 184
             +     +       R++T   +K++  L    +       + V GS+  +A++A    G 
Sbjct:    84 WSSQPYLSRRTTSLRELTTLGIKNAETLAIPSVRNDAAFLFTVVGSTGFIAVLAGQLPGD 143

Query:   185 TSFLLSQGIDIRPNLAVILGLALVDAIFLGGVCLAQISSYWPPYKRRILVHEAGHLLIAY 244
               F +   +    +L V+L +  V    L    ++  S+++P Y+ RI  HEA H L+AY
Sbjct:   144 WGFFVPYLVG-SISL-VVLAVGSVSPGLLQAA-ISGFSTFFPDYQERIAAHEAAHFLVAY 200

Query:   245 LMGCPIRGVILDPIVAMQMGIQGQAGTQFWDEKMNNELAEGRLSGTAFDRYSMVLFAGIA 304
             L+G PI G  LD          G+      DE++   +  G+L     DR + V  AG+A
Sbjct:   201 LIGLPILGYSLDI---------GKEHVNLIDERLAKLIYSGKLDSKELDRLAAVAMAGLA 251

Query:   305 AEALIYGEAEGGENDENLFRSICVLLQPPLSMAQMSNQARWAVLQSYNLLKWHKHAHLEA 364
             AE L Y +  G   D    +      QP +S  Q  N  RWAVL S +LLK +K  H   
Sbjct:   252 AEGLKYDKVIGQSADLFSLQRFINRSQPKISNEQQQNLTRWAVLYSASLLKNNKTIHEAL 311

Query:   365 VKALESGSSLSVVIRRIEEA 384
             + A+   +S+   I+ IE A
Sbjct:   312 MAAMSKNASVLECIQTIETA 331


>TAIR|locus:2199471 [details] [associations]
            symbol:AT1G54680 "AT1G54680" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009507 "chloroplast" evidence=ISM] EMBL:CP002684
            UniGene:At.10837 UniGene:At.71292 HOGENOM:HOG000265031
            EMBL:AK221413 IPI:IPI00529113 RefSeq:NP_175867.2
            ProteinModelPortal:Q56YB0 STRING:Q56YB0 EnsemblPlants:AT1G54680.1
            GeneID:841909 KEGG:ath:AT1G54680 TAIR:At1g54680 eggNOG:NOG298880
            InParanoid:Q56YB0 OMA:FSCVILG ProtClustDB:CLSN2699143
            Genevestigator:Q56YB0 Uniprot:Q56YB0
        Length = 223

 Score = 140 (54.3 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 38/172 (22%), Positives = 78/172 (45%)

Query:   232 ILVHEAGHLLIAYLMGCPIRGVILDPIVAMQMGIQGQAG----------------TQFWD 275
             ++ HE+GH L+ YL+G   R   +  + A++  +    G                 Q   
Sbjct:    51 VVQHESGHFLVGYLLGVLPRHYEIPTLEAVRQNVSNVTGRVEFVGFEFLKQVGAANQLMK 110

Query:   276 EKMNNELAEGRLSGTAFDRYSMVLFAGIAAEALIYGEAEGGENDENLFRSICVLLQPPLS 335
             + ++ ++ +G +S    + +S V+  G+  E +++G +EG  +D  + +   VL     +
Sbjct:   111 DDVDGQMNQGNISSKTLNNFSCVILGGMVTEHILFGYSEGLYSD--IVKLNDVLRWLGFT 168

Query:   336 MAQMSNQARWAVLQSYNLLKWHKHAHLEAVKALESGSSLSVVIRRIEEAMSS 387
              ++     +WAV  + +LL  HK A +   + +     +S  I  IE A+S+
Sbjct:   169 ESEKEAHIKWAVSNTVSLLHSHKEARVSLAETMAKAKPISTCIEAIESAIST 220


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.405    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      389       389   0.00093  117 3  11 22  0.37    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  248 KB (2133 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.95u 0.09s 30.04t   Elapsed:  00:00:01
  Total cpu time:  29.95u 0.09s 30.04t   Elapsed:  00:00:01
  Start:  Sat May 11 08:00:59 2013   End:  Sat May 11 08:01:00 2013

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