Query 016454
Match_columns 389
No_of_seqs 142 out of 817
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 13:51:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016454.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016454hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2di4_A Zinc protease, cell div 100.0 2.1E-34 7.2E-39 273.2 15.3 159 213-384 2-202 (238)
2 2ce7_A Cell division protein F 99.9 3E-26 1E-30 235.2 15.7 166 206-383 251-458 (476)
3 2dhr_A FTSH; AAA+ protein, hex 99.9 1.2E-24 4E-29 224.5 15.3 163 206-383 266-468 (499)
4 3b4r_A Putative zinc metallopr 96.3 0.0028 9.4E-08 59.1 4.1 57 231-310 50-106 (224)
5 2jsd_A Matrix metalloproteinas 69.1 1.9 6.5E-05 37.0 1.8 14 228-241 107-120 (160)
6 2xs4_A Karilysin protease; hyd 67.5 2.1 7.3E-05 37.2 1.8 15 227-241 113-127 (167)
7 2ovx_A Matrix metalloproteinas 65.2 2.1 7.1E-05 37.2 1.3 14 228-241 110-123 (159)
8 1hy7_A Stromelysin-1, MMP-3; m 64.6 2.6 8.9E-05 36.9 1.8 14 228-241 112-125 (173)
9 1cge_A Fibroblast collagenase; 61.5 2.8 9.4E-05 36.7 1.4 14 228-241 110-123 (168)
10 1hv5_A Stromelysin 3; inhibiti 61.4 2.7 9.2E-05 36.6 1.3 15 227-241 111-125 (165)
11 1i76_A MMP-8;, neutrophil coll 58.4 4.1 0.00014 35.5 1.9 14 228-241 111-124 (163)
12 1slm_A Stromelysin-1; hydrolas 51.5 4.8 0.00016 37.9 1.3 15 227-241 193-207 (255)
13 1y93_A Macrophage metalloelast 51.1 5.1 0.00017 34.8 1.3 14 228-241 107-120 (159)
14 2y6d_A Matrilysin; hydrolase; 50.3 6.3 0.00022 34.7 1.8 15 227-241 113-127 (174)
15 1rm8_A MMP-16, matrix metallop 49.7 6.6 0.00022 34.1 1.8 15 227-241 115-129 (169)
16 3ayu_A 72 kDa type IV collagen 49.7 5.5 0.00019 34.9 1.3 14 228-241 113-126 (167)
17 1sat_A Serratia protease; para 45.9 8.2 0.00028 39.3 2.1 15 227-241 168-182 (471)
18 1g9k_A Serralysin; beta jelly 45.3 8.5 0.00029 39.2 2.1 14 228-241 162-175 (463)
19 1kap_P Alkaline protease; calc 44.3 9 0.00031 39.2 2.1 14 228-241 178-191 (479)
20 1k7i_A PROC, secreted protease 42.3 10 0.00034 38.8 2.1 15 227-241 180-194 (479)
21 1c7k_A NCNP, zinc endoprotease 39.5 12 0.0004 32.4 1.7 14 228-241 76-89 (132)
22 830c_A MMP-13, MMP-13; matrix 34.6 13 0.00045 32.7 1.3 16 227-242 111-126 (168)
23 2cki_A Ulilysin; metalloprotea 32.1 14 0.00049 34.9 1.2 15 227-241 160-174 (262)
24 3ma2_D Matrix metalloproteinas 30.2 17 0.00058 32.4 1.3 14 227-240 120-133 (181)
25 3ba0_A Macrophage metalloelast 29.6 19 0.00066 35.2 1.7 15 228-242 106-120 (365)
26 3gpv_A Transcriptional regulat 29.1 1.4E+02 0.0048 25.3 6.9 67 317-385 57-132 (148)
27 2crn_A Ubash3A protein; compac 27.2 36 0.0012 25.6 2.5 26 53-78 32-57 (64)
28 3t15_A Ribulose bisphosphate c 25.4 28 0.00097 32.3 1.9 23 223-245 260-282 (293)
29 3cqb_A Probable protease HTPX 24.8 36 0.0012 27.4 2.3 19 224-242 78-96 (107)
30 1l6j_A Matrix metalloproteinas 24.2 22 0.00076 36.1 1.0 14 228-241 375-388 (425)
31 3edh_A Bone morphogenetic prot 24.2 27 0.00094 31.5 1.5 16 229-244 87-102 (201)
32 3lqb_A Hatching enzyme, LOC792 23.0 30 0.001 31.4 1.5 16 229-244 93-108 (199)
33 1eak_A 72 kDa type IV collagen 23.0 24 0.00083 35.8 1.0 15 228-242 365-379 (421)
34 3gp4_A Transcriptional regulat 21.0 3.3E+02 0.011 22.8 7.7 36 348-383 80-116 (142)
35 1whc_A RSGI RUH-027, UBA/UBX 3 20.7 1.1E+02 0.0036 22.8 4.0 27 53-79 32-58 (64)
36 3lq0_A Proastacin; metallopept 20.4 36 0.0012 31.7 1.5 16 230-245 121-136 (235)
37 1su3_A Interstitial collagenas 20.3 33 0.0011 34.7 1.4 14 228-241 192-205 (450)
No 1
>2di4_A Zinc protease, cell division protein FTSH homolog; metalloproteinase, hexamer-ring, hydrolase; 2.79A {Aquifex aeolicus} SCOP: a.269.1.1
Probab=100.00 E-value=2.1e-34 Score=273.16 Aligned_cols=159 Identities=18% Similarity=0.194 Sum_probs=115.9
Q ss_pred hCcccccccCCCChhhhHHHHHHHHhHHHHHHHhC--CCcceEEecchhhhhcCccccccceecchhhhhhhhccCCCHH
Q 016454 213 LGGVCLAQISSYWPPYKRRILVHEAGHLLIAYLMG--CPIRGVILDPIVAMQMGIQGQAGTQFWDEKMNNELAEGRLSGT 290 (389)
Q Consensus 213 ~Gg~~~~~l~~ls~~ekrRIAyHEAGHALVAyLLg--~PV~kvTIiP~~a~rrG~~gagGt~f~~p~~e~~l~~g~lT~~ 290 (389)
||.+... ..+++++|++||||||||||||++++ +||+||||+| || +++|++++.|+.|+ +.+|++
T Consensus 2 ~G~ekk~--~~~s~~ek~~vAyHEAGHAlva~~l~~~~pV~KVTIiP-----RG--~alG~t~~~P~ed~----~~~tk~ 68 (238)
T 2di4_A 2 QGPLGSH--MTISPKEKEKIAIHEAGHALMGLVSDDDDKVHKISIIP-----RG--MALGVTQQLPIEDK----HIYDKK 68 (238)
T ss_dssp ----------CCCHHHHHHHHHHHHHHHHHHHHCSSCCCCCCEECC-----------------------C----CCCBHH
T ss_pred CCccccC--CCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeEEEEee-----cC--CcceEEEeCCcccc----cccCHH
Confidence 5655432 25789999999999999999999998 8999999999 77 36788888887554 457999
Q ss_pred HHHHHHHHHchHHHHHHHHh--CC-CcchHhHHHHHH----HHHHHhCCC------------------------cc---H
Q 016454 291 AFDRYSMVLFAGIAAEALIY--GE-AEGGENDENLFR----SICVLLQPP------------------------LS---M 336 (389)
Q Consensus 291 ~L~~~i~VlLAGrAAEeLvf--Ge-atGgsnDL~~ar----~m~~~lG~~------------------------~s---~ 336 (389)
+|.+.++|+|||||||+|+| |+ ++|++||+++++ .|+..+|++ +| .
T Consensus 69 ~l~~~i~v~LgGRaAEelifG~g~vttGA~~Dl~~AT~iAr~MV~~~GMs~~lG~v~~~~~~~~flg~~~~~~~~Se~ta 148 (238)
T 2di4_A 69 DLYNKILVLLGGRAAEEVFFGKDGITTGAENDLQRATDLAYRMVSMWGMSDKVGPIAIRRVANPFLGGMTTAVDTSPDLL 148 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHTSCCCTTTCSCCCCC----------CCCSCCHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHhCCCCcccChHhHHHHHHHHHHHHHHHhCCCCCCCceeecCCccccccccccccccCHHHH
Confidence 99999999999999999999 55 679999999987 455555531 12 2
Q ss_pred HHHHHH----HHHHHHHHHHHHHHcHHHHHHHHHHHHhcCcH--HHHHHHHHHh
Q 016454 337 AQMSNQ----ARWAVLQSYNLLKWHKHAHLEAVKALESGSSL--SVVIRRIEEA 384 (389)
Q Consensus 337 ~~id~~----vr~A~~rA~~LLrehr~aLe~LAeaLle~ETL--~~Ci~~IE~a 384 (389)
..||.+ +++||.+|++||++|++.+++||++|+++||| +++.++|+..
T Consensus 149 ~~iD~Ev~~il~~ay~~a~~iL~~nr~~L~~lA~~Lle~EtL~~~ei~~il~~~ 202 (238)
T 2di4_A 149 REIDEEVKRIITEQYEKAKAIVEEYKEPLKAVVKKLLEKETITCEEFVEVFKLY 202 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCHHHHHHHHccC
Confidence 345544 56899999999999999999999999999999 8888888753
No 2
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=99.94 E-value=3e-26 Score=235.18 Aligned_cols=166 Identities=19% Similarity=0.249 Sum_probs=118.2
Q ss_pred HHHHHHHhCcccccccCCCChhhhHHHHHHHHhHHHHHHHhC--CCcceEEecchhhhhcCccccccceecchhhhhhhh
Q 016454 206 ALVDAIFLGGVCLAQISSYWPPYKRRILVHEAGHLLIAYLMG--CPIRGVILDPIVAMQMGIQGQAGTQFWDEKMNNELA 283 (389)
Q Consensus 206 ~aiD~V~~Gg~~~~~l~~ls~~ekrRIAyHEAGHALVAyLLg--~PV~kvTIiP~~a~rrG~~gagGt~f~~p~~e~~l~ 283 (389)
-++|++++|.... ...+++++++++||||+||++|+++++ +|++++||+| +|. +++|++++.|++|+
T Consensus 251 ~al~~v~~~~~~~--~~~~~~~e~~~~a~~e~G~a~~~~~l~~~~~~~~~~i~p-----rg~-~alg~~~~~p~~~~--- 319 (476)
T 2ce7_A 251 EAIDRVIAGPARK--SLLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIP-----RGY-KALGYTLHLPEEDK--- 319 (476)
T ss_dssp HHHHHHC----------CCCHHHHHHHHHHHHHHHHHHHHSTTCCCCCEEECC-----------------------C---
T ss_pred HHHHHHhcCcccc--chhhhcchhhhhHHHHhhhHHHhhccCCccccceeeeec-----Ccc-cccceEEEcCcccc---
Confidence 4689998886532 235789999999999999999999997 7999999999 773 36788888886554
Q ss_pred ccCCCHHHHHHHHHHHchHHHHHHHHhCCC-cchHhHHHHHHHH----HHHhCCC-------------------------
Q 016454 284 EGRLSGTAFDRYSMVLFAGIAAEALIYGEA-EGGENDENLFRSI----CVLLQPP------------------------- 333 (389)
Q Consensus 284 ~g~lT~~~L~~~i~VlLAGrAAEeLvfGea-tGgsnDL~~ar~m----~~~lG~~------------------------- 333 (389)
+.+|+++|.++++|+|||||||+++||+. +|++||+++++.+ +..+|+.
T Consensus 320 -~~~~~~~l~~~i~~~l~Gr~ae~~~~g~~~~ga~~Dl~~at~~a~~mv~~~gm~~~~g~~~~~~~~~~~~~~~~~~~~~ 398 (476)
T 2ce7_A 320 -YLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKEEQEVFLGKEITRLR 398 (476)
T ss_dssp -CSCBHHHHHHHHHHHTHHHHHHHHHHSSCCGGGHHHHHHHHHHHHHHHHTSCCCTTTCSCCCCC-------------CC
T ss_pred -cccCHHHHHHHHHHHHhHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHhCCCCcCCceeecCCCccccccccccccc
Confidence 45799999999999999999999999985 6889999998754 5544431
Q ss_pred -cc---HHHHHHH----HHHHHHHHHHHHHHcHHHHHHHHHHHHhcCcH--HHHHHHHHH
Q 016454 334 -LS---MAQMSNQ----ARWAVLQSYNLLKWHKHAHLEAVKALESGSSL--SVVIRRIEE 383 (389)
Q Consensus 334 -~s---~~~id~~----vr~A~~rA~~LLrehr~aLe~LAeaLle~ETL--~~Ci~~IE~ 383 (389)
+| ...+|++ ++.+|.+|++||++|++.+++||++|+++||| +++.++++.
T Consensus 399 ~~s~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~l~~~a~~l~~~e~l~~~~~~~~~~~ 458 (476)
T 2ce7_A 399 NYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSE 458 (476)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSEEEHHHHHHHTC-
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCeeCHHHHHHHhcc
Confidence 12 2345554 45799999999999999999999999999999 666666654
No 3
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=99.92 E-value=1.2e-24 Score=224.55 Aligned_cols=163 Identities=20% Similarity=0.172 Sum_probs=132.1
Q ss_pred HHHHHHHhCcccccccCCCChhhhHHHHHHHHhHHHHHHHhC--CCcceEEecchhhhhcCccccccceecchh-hhhhh
Q 016454 206 ALVDAIFLGGVCLAQISSYWPPYKRRILVHEAGHLLIAYLMG--CPIRGVILDPIVAMQMGIQGQAGTQFWDEK-MNNEL 282 (389)
Q Consensus 206 ~aiD~V~~Gg~~~~~l~~ls~~ekrRIAyHEAGHALVAyLLg--~PV~kvTIiP~~a~rrG~~gagGt~f~~p~-~e~~l 282 (389)
-++|++.+|.... ...+++++|++++|||+||++|+|+++ +||+++||+| +| ++.|+++ |+ .+.
T Consensus 266 ~al~~v~~~~~~~--~~~~~~~e~~~~a~~e~g~av~~~~l~~~~~v~~~~i~p-----r~--~~~g~~~--p~q~~~-- 332 (499)
T 2dhr_A 266 EAADRVMMLPAKK--SLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVP-----RG--RALGFMM--PRREDM-- 332 (499)
T ss_dssp HHHHHHTTCSSSS--CCCCCTTHHHHHHHHHHHHHHHHCCSSSCCCCCCEESCC-----SS--CTTCSSH--HHHTTC--
T ss_pred HHHHHHhcccccc--cchhhHHHHhhhHHHHHHHHHHHhhcCCCCeeeEEEeec-----CC--CcCcccc--cchhhh--
Confidence 4689999986532 225789999999999999999999987 7999999999 76 3667777 54 333
Q ss_pred hccCCCHHHHHHHHHHHchHHHHHHHHhCCC-cchHhHHHHHHH----HHHHhCCC-----------------------c
Q 016454 283 AEGRLSGTAFDRYSMVLFAGIAAEALIYGEA-EGGENDENLFRS----ICVLLQPP-----------------------L 334 (389)
Q Consensus 283 ~~g~lT~~~L~~~i~VlLAGrAAEeLvfGea-tGgsnDL~~ar~----m~~~lG~~-----------------------~ 334 (389)
+.+|+.++...|+++|||||||+++||+. +|++||+++++. |+..+|+. +
T Consensus 333 --~~~t~~~l~~~i~~~lgGr~ae~~~~g~~~~ga~~Dl~~at~~a~~mv~~~gm~~~~g~~~~~~~~~~~~~~~~~~~~ 410 (499)
T 2dhr_A 333 --LHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQY 410 (499)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHHHHHHSCSCCBCCCHHHHHHHHHHHHHHTTSCCCSSSCSCCCCCCCCCSSCCCCCCCC
T ss_pred --hccCHHHHHHHHHHHhhhHhHHHhhhcccCcccHHHHHHHHHHHHHHHHHhCCCCCCCceeecCCCcccccccccccc
Confidence 45799999999999999999999999985 699999999975 45445431 1
Q ss_pred c---HHHHHHH----HHHHHHHHHHHHHHcHHHHHHHHHHHHhcCcH--HHHHHHHHH
Q 016454 335 S---MAQMSNQ----ARWAVLQSYNLLKWHKHAHLEAVKALESGSSL--SVVIRRIEE 383 (389)
Q Consensus 335 s---~~~id~~----vr~A~~rA~~LLrehr~aLe~LAeaLle~ETL--~~Ci~~IE~ 383 (389)
+ ...||++ ++++|.+|++||++|++.+++||++|+++||| +++.++++.
T Consensus 411 s~~~~~~i~~~v~~~~~~~~~~~~~~l~~~~~~l~~~a~~l~~~e~l~~~~~~~~~~~ 468 (499)
T 2dhr_A 411 SEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEG 468 (499)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSEECHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCHHHHHHHhcc
Confidence 2 2345544 56799999999999999999999999999999 667677764
No 4
>3b4r_A Putative zinc metalloprotease MJ0392; intramembrane protease, CBS domain, hydrolase, metal-binding, transmembrane; 3.30A {Methanocaldococcus jannaschii}
Probab=96.27 E-value=0.0028 Score=59.14 Aligned_cols=57 Identities=28% Similarity=0.444 Sum_probs=41.0
Q ss_pred HHHHHHHhHHHHHHHhCCCcceEEecchhhhhcCccccccceecchhhhhhhhccCCCHHHHHHHHHHHchHHHHHHHHh
Q 016454 231 RILVHEAGHLLIAYLMGCPIRGVILDPIVAMQMGIQGQAGTQFWDEKMNNELAEGRLSGTAFDRYSMVLFAGIAAEALIY 310 (389)
Q Consensus 231 RIAyHEAGHALVAyLLg~PV~kvTIiP~~a~rrG~~gagGt~f~~p~~e~~l~~g~lT~~~L~~~i~VlLAGrAAEeLvf 310 (389)
-+..||.||+++|+..|++++++++.|+ | |+.-... .++ .+.+.|++||-.+.-+.-
T Consensus 50 ~v~~HElgH~~~A~~~G~~~~~i~l~p~-----G-----g~~~~~~----------~~~---~~~~~ValAGPl~nl~la 106 (224)
T 3b4r_A 50 SVVLHELGHSYVAKKYGVKIEKILLLPI-----G-----GVAMMDK----------IPK---EGELRIGIAGPLVSFIIG 106 (224)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCCEEECSS-----S-----CBCCCCC----------CCS---SSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCccccEEEEEe-----e-----eEEEccc----------CCc---cceeeeeeeHHHHHHHHH
Confidence 4678999999999999999999999993 2 3222111 111 345578899999886543
No 5
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=69.09 E-value=1.9 Score=37.02 Aligned_cols=14 Identities=36% Similarity=0.425 Sum_probs=12.0
Q ss_pred hhHHHHHHHHhHHH
Q 016454 228 YKRRILVHEAGHLL 241 (389)
Q Consensus 228 ekrRIAyHEAGHAL 241 (389)
+...|+.||.||+|
T Consensus 107 ~~~~v~~HEiGHaL 120 (160)
T 2jsd_A 107 NLFTVAAHEFGHAL 120 (160)
T ss_dssp EHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhHhhh
Confidence 45689999999986
No 6
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=67.45 E-value=2.1 Score=37.17 Aligned_cols=15 Identities=40% Similarity=0.474 Sum_probs=12.6
Q ss_pred hhhHHHHHHHHhHHH
Q 016454 227 PYKRRILVHEAGHLL 241 (389)
Q Consensus 227 ~ekrRIAyHEAGHAL 241 (389)
.+...|+.||.||+|
T Consensus 113 ~~~~~v~~HEiGHaL 127 (167)
T 2xs4_A 113 IDLITVAAHEIGHLL 127 (167)
T ss_dssp EEHHHHHHHHHHHHH
T ss_pred cchhhhHHHHHHHhh
Confidence 356789999999986
No 7
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=65.17 E-value=2.1 Score=37.18 Aligned_cols=14 Identities=29% Similarity=0.320 Sum_probs=11.9
Q ss_pred hhHHHHHHHHhHHH
Q 016454 228 YKRRILVHEAGHLL 241 (389)
Q Consensus 228 ekrRIAyHEAGHAL 241 (389)
+...|+.||.||+|
T Consensus 110 ~~~~va~HEiGHaL 123 (159)
T 2ovx_A 110 SLFLVAAHQFGHAL 123 (159)
T ss_dssp EHHHHHHHHHHHHT
T ss_pred chhhhhhhhhhhhh
Confidence 45689999999985
No 8
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ...
Probab=64.56 E-value=2.6 Score=36.94 Aligned_cols=14 Identities=36% Similarity=0.392 Sum_probs=12.0
Q ss_pred hhHHHHHHHHhHHH
Q 016454 228 YKRRILVHEAGHLL 241 (389)
Q Consensus 228 ekrRIAyHEAGHAL 241 (389)
+...|+.||.||+|
T Consensus 112 ~~~~v~~HEiGHaL 125 (173)
T 1hy7_A 112 NLFLVAAHEIGHSL 125 (173)
T ss_dssp EHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHhh
Confidence 45689999999986
No 9
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=61.55 E-value=2.8 Score=36.66 Aligned_cols=14 Identities=43% Similarity=0.636 Sum_probs=11.8
Q ss_pred hhHHHHHHHHhHHH
Q 016454 228 YKRRILVHEAGHLL 241 (389)
Q Consensus 228 ekrRIAyHEAGHAL 241 (389)
+...|+.||.||+|
T Consensus 110 ~~~~v~~HEiGHaL 123 (168)
T 1cge_A 110 NLHRVAAHELGHSL 123 (168)
T ss_dssp BHHHHHHHHHHHHT
T ss_pred chhhhhhhHhHhhh
Confidence 35689999999985
No 10
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=61.44 E-value=2.7 Score=36.58 Aligned_cols=15 Identities=33% Similarity=0.494 Sum_probs=12.5
Q ss_pred hhhHHHHHHHHhHHH
Q 016454 227 PYKRRILVHEAGHLL 241 (389)
Q Consensus 227 ~ekrRIAyHEAGHAL 241 (389)
.+...|+.||.||+|
T Consensus 111 ~~~~~v~~HEiGHaL 125 (165)
T 1hv5_A 111 TDLLQVAAHEFGHVL 125 (165)
T ss_dssp EEHHHHHHHHHHHHT
T ss_pred chhhhhHHHHhHhhh
Confidence 456789999999985
No 11
>1i76_A MMP-8;, neutrophil collagenase; hydrolase, complex (metalloprotease/inhibitor); HET: BSI; 1.20A {Homo sapiens} SCOP: d.92.1.11 PDB: 1i73_A* 1jao_A* 1jap_A 1jaq_A* 1jj9_A* 1mmb_A* 1zp5_A* 1zs0_A* 1zvx_A* 3dng_A* 3dpe_A* 3dpf_A* 1kbc_A* 1jan_A* 1bzs_A* 1mnc_A* 2oy2_A 1a86_A* 1jh1_A* 1a85_A ...
Probab=58.41 E-value=4.1 Score=35.46 Aligned_cols=14 Identities=36% Similarity=0.356 Sum_probs=11.9
Q ss_pred hhHHHHHHHHhHHH
Q 016454 228 YKRRILVHEAGHLL 241 (389)
Q Consensus 228 ekrRIAyHEAGHAL 241 (389)
+...|+.||.||+|
T Consensus 111 ~~~~v~~HE~GHal 124 (163)
T 1i76_A 111 NLFLVAAHEFGHSL 124 (163)
T ss_dssp BHHHHHHHHHHHHH
T ss_pred hhhhhhHHHhhhhh
Confidence 45689999999986
No 12
>1slm_A Stromelysin-1; hydrolase, metalloprotease, fibroblast, collagen degradation; 1.90A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11
Probab=51.45 E-value=4.8 Score=37.87 Aligned_cols=15 Identities=33% Similarity=0.368 Sum_probs=12.5
Q ss_pred hhhHHHHHHHHhHHH
Q 016454 227 PYKRRILVHEAGHLL 241 (389)
Q Consensus 227 ~ekrRIAyHEAGHAL 241 (389)
.+...|+.||.||+|
T Consensus 193 ~~l~~va~HEiGHaL 207 (255)
T 1slm_A 193 TNLFLVAAHEIGHSL 207 (255)
T ss_dssp EEHHHHHHHHHHHHT
T ss_pred eeehhhhHHHHHHHh
Confidence 345789999999986
No 13
>1y93_A Macrophage metalloelastase; matrix metalloproteinase, MMP12, complex (elastase inhibitor), acetohydroxamic acid, hydrola; 1.03A {Homo sapiens} SCOP: d.92.1.11 PDB: 1rmz_A 1ycm_A* 1z3j_A* 2hu6_A* 2oxu_A 2oxw_A 2oxz_A 3lik_A* 3lil_A* 3lir_A* 3ljg_A* 1os9_A 1os2_A 3f17_A* 3ehy_A* 3ehx_A* 3f15_A* 3f16_A* 3f18_A* 3f19_A* ...
Probab=51.05 E-value=5.1 Score=34.76 Aligned_cols=14 Identities=43% Similarity=0.382 Sum_probs=11.9
Q ss_pred hhHHHHHHHHhHHH
Q 016454 228 YKRRILVHEAGHLL 241 (389)
Q Consensus 228 ekrRIAyHEAGHAL 241 (389)
+...|+.||.||+|
T Consensus 107 ~~~~~~~HE~GH~l 120 (159)
T 1y93_A 107 NLFLTAVHEIGHSL 120 (159)
T ss_dssp EHHHHHHHHHHHHT
T ss_pred hhhhhhhhhhhhhh
Confidence 46789999999985
No 14
>2y6d_A Matrilysin; hydrolase; HET: TQJ; 1.60A {Homo sapiens} PDB: 2ddy_A* 1mmq_A* 1mmp_A* 1mmr_A* 2y6c_A*
Probab=50.27 E-value=6.3 Score=34.70 Aligned_cols=15 Identities=33% Similarity=0.215 Sum_probs=12.4
Q ss_pred hhhHHHHHHHHhHHH
Q 016454 227 PYKRRILVHEAGHLL 241 (389)
Q Consensus 227 ~ekrRIAyHEAGHAL 241 (389)
.+...|+.||.||+|
T Consensus 113 ~~~~~~~~HE~gH~l 127 (174)
T 2y6d_A 113 INFLYAATHELGHSL 127 (174)
T ss_dssp EEHHHHHHHHHHHHH
T ss_pred ceeeehhhHHhHhhh
Confidence 345689999999986
No 15
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=49.72 E-value=6.6 Score=34.13 Aligned_cols=15 Identities=40% Similarity=0.399 Sum_probs=12.8
Q ss_pred hhhHHHHHHHHhHHH
Q 016454 227 PYKRRILVHEAGHLL 241 (389)
Q Consensus 227 ~ekrRIAyHEAGHAL 241 (389)
.+...|+.||.||+|
T Consensus 115 ~~~~~~~~he~gh~l 129 (169)
T 1rm8_A 115 NDLFLVAVHELGHAL 129 (169)
T ss_dssp EEHHHHHHHHHHHHH
T ss_pred ceeeeehhhhhhhhc
Confidence 556789999999986
No 16
>3ayu_A 72 kDa type IV collagenase; protease, hydrolase-hydrolase inhibitor complex; 2.00A {Homo sapiens} PDB: 1qib_A 1hov_A*
Probab=49.66 E-value=5.5 Score=34.88 Aligned_cols=14 Identities=21% Similarity=0.252 Sum_probs=11.9
Q ss_pred hhHHHHHHHHhHHH
Q 016454 228 YKRRILVHEAGHLL 241 (389)
Q Consensus 228 ekrRIAyHEAGHAL 241 (389)
+...|+.||.||+|
T Consensus 113 ~~~~~~~HE~gH~l 126 (167)
T 3ayu_A 113 SLFLVAAHAFGHAM 126 (167)
T ss_dssp EHHHHHHHHHHHHT
T ss_pred cceeehhhhhHHhc
Confidence 45689999999986
No 17
>1sat_A Serratia protease; parallel beta helix, parallel beta roll, hydrolase (serine protease); 1.75A {Serratia marcescens} SCOP: b.80.7.1 d.92.1.6 PDB: 1af0_A* 1smp_A 1srp_A
Probab=45.91 E-value=8.2 Score=39.35 Aligned_cols=15 Identities=47% Similarity=0.840 Sum_probs=12.4
Q ss_pred hhhHHHHHHHHhHHH
Q 016454 227 PYKRRILVHEAGHLL 241 (389)
Q Consensus 227 ~ekrRIAyHEAGHAL 241 (389)
.+...|+.||.||+|
T Consensus 168 ~~~~~va~HEiGHaL 182 (471)
T 1sat_A 168 DYGRQTFTHEIGHAL 182 (471)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred cccceeeeeeccccc
Confidence 445689999999987
No 18
>1g9k_A Serralysin; beta jelly roll, hydrolase; 1.96A {Pseudomonas} SCOP: b.80.7.1 d.92.1.6 PDB: 1o0q_A 1o0t_A 1om6_A 1om7_A 1om8_A 1omj_A 1h71_P
Probab=45.33 E-value=8.5 Score=39.23 Aligned_cols=14 Identities=57% Similarity=0.961 Sum_probs=12.2
Q ss_pred hhHHHHHHHHhHHH
Q 016454 228 YKRRILVHEAGHLL 241 (389)
Q Consensus 228 ekrRIAyHEAGHAL 241 (389)
+...|+.||.||+|
T Consensus 162 ~~~~va~HEiGHaL 175 (463)
T 1g9k_A 162 YGRQTLTHEIGHTL 175 (463)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred cchhhhhhhhhhhh
Confidence 45689999999987
No 19
>1kap_P Alkaline protease; calcium binding protein, zinc metalloprotease; 1.64A {Pseudomonas aeruginosa} SCOP: b.80.7.1 d.92.1.6 PDB: 1jiw_P 1akl_A
Probab=44.32 E-value=9 Score=39.23 Aligned_cols=14 Identities=57% Similarity=0.961 Sum_probs=12.1
Q ss_pred hhHHHHHHHHhHHH
Q 016454 228 YKRRILVHEAGHLL 241 (389)
Q Consensus 228 ekrRIAyHEAGHAL 241 (389)
+...|+.||.||+|
T Consensus 178 ~~~~va~HEIGHaL 191 (479)
T 1kap_P 178 YGRQTLTHEIGHTL 191 (479)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred ccceeehhhhhhhh
Confidence 45689999999986
No 20
>1k7i_A PROC, secreted protease C; metalloprotease, hydrolase; 1.59A {Erwinia chrysanthemi} SCOP: b.80.7.1 d.92.1.6 PDB: 1k7g_A 1k7q_A 1go8_P 3hbv_P 3hda_P 3hbu_P 1go7_P 3hb2_P
Probab=42.32 E-value=10 Score=38.82 Aligned_cols=15 Identities=47% Similarity=0.844 Sum_probs=12.4
Q ss_pred hhhHHHHHHHHhHHH
Q 016454 227 PYKRRILVHEAGHLL 241 (389)
Q Consensus 227 ~ekrRIAyHEAGHAL 241 (389)
.+...|+.||.||+|
T Consensus 180 ~~~~~va~HEiGHaL 194 (479)
T 1k7i_A 180 EYGRQTFTHEIGHAL 194 (479)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred cccccccHHHHHHhh
Confidence 344689999999986
No 21
>1c7k_A NCNP, zinc endoprotease; alpha and beta protein, metalloproteinase, hydrolase; 1.00A {Streptomyces caespitosus} SCOP: d.92.1.1 PDB: 1kuh_A
Probab=39.48 E-value=12 Score=32.39 Aligned_cols=14 Identities=43% Similarity=0.769 Sum_probs=11.7
Q ss_pred hhHHHHHHHHhHHH
Q 016454 228 YKRRILVHEAGHLL 241 (389)
Q Consensus 228 ekrRIAyHEAGHAL 241 (389)
...+|+.||-||.|
T Consensus 76 ~~~~v~aHE~GH~L 89 (132)
T 1c7k_A 76 DSTRVTAHETGHVL 89 (132)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CCceEEeeeehhcc
Confidence 35589999999986
No 22
>830c_A MMP-13, MMP-13; matrix metalloprotease; HET: RS1; 1.60A {Homo sapiens} SCOP: d.92.1.11 PDB: 456c_A* 1you_A* 4a7b_A* 3tvc_A* 1eub_A* 1xuc_A* 1xud_A* 1xur_A* 2yig_A* 3elm_A* 3i7g_A* 3i7i_A* 3zxh_A* 2ow9_A* 2ozr_A* 3kek_A* 3kej_A* 3kec_A* 2d1n_A* 1fls_A* ...
Probab=34.58 E-value=13 Score=32.72 Aligned_cols=16 Identities=31% Similarity=0.154 Sum_probs=12.7
Q ss_pred hhhHHHHHHHHhHHHH
Q 016454 227 PYKRRILVHEAGHLLI 242 (389)
Q Consensus 227 ~ekrRIAyHEAGHALV 242 (389)
.+...|+.||.||+|=
T Consensus 111 ~~l~~v~~hE~Gh~lG 126 (168)
T 830c_A 111 YNLFLVAAHEFGHSLG 126 (168)
T ss_dssp EEHHHHHHHHHHHHTT
T ss_pred cchhhhhhhhhcchhc
Confidence 3457899999999863
No 23
>2cki_A Ulilysin; metalloprotease, hydrolase; HET: ARG; 1.7A {Methanosarcina acetivorans} PDB: 2j83_A* 3lum_A* 3lun_A*
Probab=32.11 E-value=14 Score=34.91 Aligned_cols=15 Identities=47% Similarity=0.516 Sum_probs=12.3
Q ss_pred hhhHHHHHHHHhHHH
Q 016454 227 PYKRRILVHEAGHLL 241 (389)
Q Consensus 227 ~ekrRIAyHEAGHAL 241 (389)
-..-+++.||.||.|
T Consensus 160 yn~g~TltHEvGH~L 174 (262)
T 2cki_A 160 FDKGRTATHEIGHWL 174 (262)
T ss_dssp SCSSHHHHHHHHHHT
T ss_pred ccccchhhhhhhhhh
Confidence 345689999999987
No 24
>3ma2_D Matrix metalloproteinase-14; protein - protein complex, cleavage on PAIR of basic residue disulfide bond, membrane, metal-binding; 2.05A {Homo sapiens} SCOP: d.92.1.11 PDB: 1bqq_M 1buv_M
Probab=30.20 E-value=17 Score=32.45 Aligned_cols=14 Identities=36% Similarity=0.332 Sum_probs=11.8
Q ss_pred hhhHHHHHHHHhHH
Q 016454 227 PYKRRILVHEAGHL 240 (389)
Q Consensus 227 ~ekrRIAyHEAGHA 240 (389)
.+..-|+.||.||+
T Consensus 120 ~~l~~v~~hE~Gh~ 133 (181)
T 3ma2_D 120 NDIFLVAVHELGHA 133 (181)
T ss_dssp EEHHHHHHHHHHHH
T ss_pred ceeeeeehhhcccc
Confidence 45667999999998
No 25
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=29.65 E-value=19 Score=35.23 Aligned_cols=15 Identities=40% Similarity=0.257 Sum_probs=12.2
Q ss_pred hhHHHHHHHHhHHHH
Q 016454 228 YKRRILVHEAGHLLI 242 (389)
Q Consensus 228 ekrRIAyHEAGHALV 242 (389)
+...|+.||.||+|-
T Consensus 106 ~~~~~~~HE~gH~lG 120 (365)
T 3ba0_A 106 NLFLTAVHEIGHSLG 120 (365)
T ss_dssp ESSHHHHHHHHHHHT
T ss_pred cceeehhhhhhhhhc
Confidence 345899999999984
No 26
>3gpv_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.90A {Bacillus thuringiensis serovarkonkukian}
Probab=29.11 E-value=1.4e+02 Score=25.28 Aligned_cols=67 Identities=15% Similarity=0.307 Sum_probs=37.7
Q ss_pred HhHHHHHHHHH--HHhCCCccHHHHHHHHHH------HHHHHHHHHHHcHHHHHHHHHHHHhc-CcHHHHHHHHHHhh
Q 016454 317 ENDENLFRSIC--VLLQPPLSMAQMSNQARW------AVLQSYNLLKWHKHAHLEAVKALESG-SSLSVVIRRIEEAM 385 (389)
Q Consensus 317 snDL~~ar~m~--~~lG~~~s~~~id~~vr~------A~~rA~~LLrehr~aLe~LAeaLle~-ETL~~Ci~~IE~a~ 385 (389)
.+|+++++.+. ..+| ++-++|.+.+.. .......+|++++..+++--+.|.+. +.|+..+..+++.+
T Consensus 57 ~~dl~~l~~I~~lr~~G--~sL~eIk~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~~ 132 (148)
T 3gpv_A 57 EEALKYLEMILCLKNTG--MPIQKIKQFIDWSMEGDSTILHRLKLMKQQEANVLQLIQDTEKNLKKIQQKIAKYEDEI 132 (148)
T ss_dssp HHHHHHHHHHHHHHTTT--CCHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHcC--CCHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47777776543 3345 444666555542 24456677887777777666666553 45666666555544
No 27
>2crn_A Ubash3A protein; compact three-helix bundle, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=27.15 E-value=36 Score=25.55 Aligned_cols=26 Identities=23% Similarity=0.383 Sum_probs=21.4
Q ss_pred HHhhhcHHHHHHHhhhcCCCCCCCcc
Q 016454 53 AVKRKDLARALRFLKNKNDNNPIEPL 78 (389)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (389)
+...+|+..|++||-+|.+++.++.|
T Consensus 32 ~t~n~~~e~A~~wL~~h~~d~d~d~p 57 (64)
T 2crn_A 32 ATGRKTAEEALAWLHDHCNDPSLDDP 57 (64)
T ss_dssp HHTSCCHHHHHHHHHHHSSSTTSCCS
T ss_pred HhCCCCHHHHHHHHHhCCCCccccCC
Confidence 34557999999999999998877765
No 28
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=25.40 E-value=28 Score=32.27 Aligned_cols=23 Identities=17% Similarity=0.195 Sum_probs=18.9
Q ss_pred CCChhhhHHHHHHHHhHHHHHHH
Q 016454 223 SYWPPYKRRILVHEAGHLLIAYL 245 (389)
Q Consensus 223 ~ls~~ekrRIAyHEAGHALVAyL 245 (389)
.+.+.+....++||+||+++..-
T Consensus 260 ~~~~~~~~~~~l~~~g~~~~~eq 282 (293)
T 3t15_A 260 TFEQPKMTIEKLLEYGNMLVQEQ 282 (293)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHHHHHH
Confidence 45667888999999999998753
No 29
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=24.79 E-value=36 Score=27.39 Aligned_cols=19 Identities=21% Similarity=0.239 Sum_probs=16.4
Q ss_pred CChhhhHHHHHHHHhHHHH
Q 016454 224 YWPPYKRRILVHEAGHLLI 242 (389)
Q Consensus 224 ls~~ekrRIAyHEAGHALV 242 (389)
++++|..-|.-||.||..-
T Consensus 78 l~~~El~aVlaHElgH~~~ 96 (107)
T 3cqb_A 78 MTRDEAEAVLAHEVSHIAN 96 (107)
T ss_dssp SCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHC
Confidence 4689999999999999753
No 30
>1l6j_A Matrix metalloproteinase-9; twisted beta sheet flanked by helices, hydrolase; 2.50A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2
Probab=24.21 E-value=22 Score=36.13 Aligned_cols=14 Identities=36% Similarity=0.365 Sum_probs=12.0
Q ss_pred hhHHHHHHHHhHHH
Q 016454 228 YKRRILVHEAGHLL 241 (389)
Q Consensus 228 ekrRIAyHEAGHAL 241 (389)
....||.||.||+|
T Consensus 375 ~l~~Va~HE~GHaL 388 (425)
T 1l6j_A 375 SLFLVAAHEFGHAL 388 (425)
T ss_dssp EHHHHHHHHHHHHT
T ss_pred cchhhhhhhhhhhc
Confidence 55689999999986
No 31
>3edh_A Bone morphogenetic protein 1; vicinal disulfide, alternative splicing, calcium, chondrogenesis, cleavage on PAIR of basic residues, cytokine; 1.25A {Homo sapiens} SCOP: d.92.1.0 PDB: 3edg_A 3edi_A
Probab=24.19 E-value=27 Score=31.54 Aligned_cols=16 Identities=44% Similarity=0.627 Sum_probs=12.6
Q ss_pred hHHHHHHHHhHHHHHH
Q 016454 229 KRRILVHEAGHLLIAY 244 (389)
Q Consensus 229 krRIAyHEAGHALVAy 244 (389)
...++.||.||||=-+
T Consensus 87 ~~g~i~HEl~HalGf~ 102 (201)
T 3edh_A 87 KFGIVVHELGHVVGFW 102 (201)
T ss_dssp SHHHHHHHHHHHHTBC
T ss_pred ccchhHHHHHHHhcch
Confidence 4579999999997543
No 32
>3lqb_A Hatching enzyme, LOC792177 protein; hydrolase, metalloprotease, astacin, metal- protease; 1.10A {Danio rerio}
Probab=23.00 E-value=30 Score=31.41 Aligned_cols=16 Identities=38% Similarity=0.347 Sum_probs=12.8
Q ss_pred hHHHHHHHHhHHHHHH
Q 016454 229 KRRILVHEAGHLLIAY 244 (389)
Q Consensus 229 krRIAyHEAGHALVAy 244 (389)
...++.||.||||=-+
T Consensus 93 ~~g~i~HEl~HaLGf~ 108 (199)
T 3lqb_A 93 YSGIAQHELNHALGFY 108 (199)
T ss_dssp SHHHHHHHHHHHHTCC
T ss_pred ccchHHHHHHHHhccc
Confidence 3589999999997543
No 33
>1eak_A 72 kDa type IV collagenase; hydrolase-hydrolase inhibitor complex, hydrolyse, matrix metalloproteinase, gelatinase A, hydrolase- hydrolase inhib complex; 2.66A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1ks0_A 1cxw_A
Probab=22.97 E-value=24 Score=35.83 Aligned_cols=15 Identities=20% Similarity=0.173 Sum_probs=12.5
Q ss_pred hhHHHHHHHHhHHHH
Q 016454 228 YKRRILVHEAGHLLI 242 (389)
Q Consensus 228 ekrRIAyHEAGHALV 242 (389)
....||.||.||+|=
T Consensus 365 ~l~~va~HE~GHaLG 379 (421)
T 1eak_A 365 SLFLVAAHQFGHAMG 379 (421)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred cchhhhhhhhhhccC
Confidence 556899999999864
No 34
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=20.97 E-value=3.3e+02 Score=22.82 Aligned_cols=36 Identities=14% Similarity=0.180 Sum_probs=17.7
Q ss_pred HHHHHHHHHcHHHHHHHHHHHHhc-CcHHHHHHHHHH
Q 016454 348 LQSYNLLKWHKHAHLEAVKALESG-SSLSVVIRRIEE 383 (389)
Q Consensus 348 ~rA~~LLrehr~aLe~LAeaLle~-ETL~~Ci~~IE~ 383 (389)
.....+|++++..+++--+.|.+- +.|+..+...++
T Consensus 80 ~~~~~~L~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~ 116 (142)
T 3gp4_A 80 EARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDT 116 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666665555544444442 334444444443
No 35
>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1
Probab=20.70 E-value=1.1e+02 Score=22.81 Aligned_cols=27 Identities=11% Similarity=0.267 Sum_probs=21.5
Q ss_pred HHhhhcHHHHHHHhhhcCCCCCCCccc
Q 016454 53 AVKRKDLARALRFLKNKNDNNPIEPLS 79 (389)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (389)
+...+|+.+|++||-+|..++.++.|-
T Consensus 32 ~t~~~nve~A~ewLl~~~~d~d~d~pl 58 (64)
T 1whc_A 32 LTGNQGIEAAMDWLMEHEDDPDVDEPL 58 (64)
T ss_dssp HHTSCCHHHHHHHHHHHTTCSCTTCCS
T ss_pred HhcCCCHHHHHHHHHhCCCCccccccc
Confidence 344578999999999999888777653
No 36
>3lq0_A Proastacin; metallopeptidase, zymogen activation, proenzyme, protease, D bond, hydrolase, metal-binding, metalloprotease, zymogen; 1.45A {Astacus astacus} PDB: 1iab_A 1iaa_A 1ast_A 1iac_A 1iad_A 1iae_A 1qji_A* 1qjj_A
Probab=20.42 E-value=36 Score=31.67 Aligned_cols=16 Identities=19% Similarity=0.243 Sum_probs=13.1
Q ss_pred HHHHHHHHhHHHHHHH
Q 016454 230 RRILVHEAGHLLIAYL 245 (389)
Q Consensus 230 rRIAyHEAGHALVAyL 245 (389)
..++.||.||||=-+=
T Consensus 121 ~g~i~HEl~HaLGf~H 136 (235)
T 3lq0_A 121 HGTILHALMHAIGFYH 136 (235)
T ss_dssp HHHHHHHHHHHHHBCC
T ss_pred cchHHHHHHHHhccce
Confidence 4899999999986544
No 37
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=20.33 E-value=33 Score=34.65 Aligned_cols=14 Identities=43% Similarity=0.636 Sum_probs=11.8
Q ss_pred hhHHHHHHHHhHHH
Q 016454 228 YKRRILVHEAGHLL 241 (389)
Q Consensus 228 ekrRIAyHEAGHAL 241 (389)
+...|+.||.||+|
T Consensus 192 ~l~~v~~HE~GH~l 205 (450)
T 1su3_A 192 NLHRVAAHELGHSL 205 (450)
T ss_dssp BHHHHHHHHHHHHT
T ss_pred ehhchhhhHHHHhc
Confidence 45789999999984
Done!